-- dump date 20120504_131450 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003108649.1 256370825 8324142 87..1463 1 NC_013124.1 KEGG: ace:Acel_0001 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 1463 8324142 Afer_0001 Acidimicrobium ferrooxidans DSM 10331 chromosomal replication initiator protein DnaA YP_003108649.1 87 D 525909 CDS YP_003108650.1 256370826 8322048 1687..2787 1 NC_013124.1 KEGG: rxy:Rxyl_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain; DNA polymerase III subunit beta 2787 8322048 Afer_0002 Acidimicrobium ferrooxidans DSM 10331 DNA polymerase III subunit beta YP_003108650.1 1687 D 525909 CDS YP_003108651.1 256370827 8322049 2796..3836 1 NC_013124.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: sth:STH4 DNA repair and genetic recombination protein; DNA replication and repair protein RecF 3836 8322049 Afer_0003 Acidimicrobium ferrooxidans DSM 10331 DNA replication and repair protein RecF YP_003108651.1 2796 D 525909 CDS YP_003108652.1 256370828 8322050 3847..4161 1 NC_013124.1 hypothetical protein 4161 8322050 Afer_0004 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108652.1 3847 D 525909 CDS YP_003108653.1 256370829 8322051 4247..6190 1 NC_013124.1 KEGG: ace:Acel_0005 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; DNA gyrase subunit B 6190 8322051 Afer_0005 Acidimicrobium ferrooxidans DSM 10331 DNA gyrase subunit B YP_003108653.1 4247 D 525909 CDS YP_003108654.1 256370830 8322052 6222..8672 1 NC_013124.1 KEGG: chy:CHY_2704 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A; DNA gyrase subunit A 8672 8322052 Afer_0006 Acidimicrobium ferrooxidans DSM 10331 DNA gyrase subunit A YP_003108654.1 6222 D 525909 CDS YP_003108655.1 256370831 8322053 8721..9707 1 NC_013124.1 KEGG: glycosyl hydrolase, family 18, ; K01183 chitinase; hypothetical protein 9707 8322053 Afer_0007 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108655.1 8721 D 525909 CDS YP_003108656.1 256370832 8322054 9712..11214 1 NC_013124.1 PFAM: type II secretion system protein E; KEGG: sco:SCO4526 protein kinase; type II secretion system protein E 11214 8322054 Afer_0008 Acidimicrobium ferrooxidans DSM 10331 type II secretion system protein E YP_003108656.1 9712 D 525909 CDS YP_003108657.1 256370833 8322055 11311..11580 1 NC_013124.1 hypothetical protein 11580 8322055 Afer_0009 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108657.1 11311 D 525909 CDS YP_003108658.1 256370834 8322056 11586..11957 1 NC_013124.1 hypothetical protein 11957 8322056 Afer_0010 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108658.1 11586 D 525909 CDS YP_003108659.1 256370835 8322057 11957..12382 1 NC_013124.1 KEGG: GK18624; hypothetical protein 12382 8322057 Afer_0011 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108659.1 11957 D 525909 CDS YP_003108660.1 256370836 8322058 12379..12861 1 NC_013124.1 hypothetical protein 12861 8322058 Afer_0012 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108660.1 12379 D 525909 CDS YP_003108661.1 256370837 8322059 12858..14492 1 NC_013124.1 KEGG: saq:Sare_5011 Na+/solute symporter; hypothetical protein 14492 8322059 Afer_0013 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108661.1 12858 D 525909 CDS YP_003108662.1 256370838 8322060 14486..14986 1 NC_013124.1 hypothetical protein 14986 8322060 Afer_0014 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108662.1 14486 D 525909 CDS YP_003108663.1 256370839 8322061 14983..15468 1 NC_013124.1 KEGG: cak:Caul_4339 peptidase M28; hypothetical protein 15468 8322061 Afer_0015 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108663.1 14983 D 525909 CDS YP_003108664.1 256370840 8322062 15525..16175 1 NC_013124.1 KEGG: GK12395; hypothetical protein 16175 8322062 Afer_0016 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108664.1 15525 D 525909 CDS YP_003108665.1 256370841 8322063 16178..16954 1 NC_013124.1 KEGG: dvu:DVU2710 hypothetical protein; hypothetical protein 16954 8322063 Afer_0017 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108665.1 16178 D 525909 CDS YP_003108666.1 256370842 8322064 16951..17850 1 NC_013124.1 hypothetical protein 17850 8322064 Afer_0018 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108666.1 16951 D 525909 CDS YP_003108667.1 256370843 8322065 17862..18785 1 NC_013124.1 KEGG: ret:RHE_CH02708 hypothetical protein; hypothetical protein 18785 8322065 Afer_0019 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108667.1 17862 D 525909 CDS YP_003108668.1 256370844 8322066 complement(18791..20422) 1 NC_013124.1 KEGG: aau:AAur_3218 glycosyl hydrolase family protein; PFAM: Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; Chitinase 20422 8322066 Afer_0020 Acidimicrobium ferrooxidans DSM 10331 Chitinase YP_003108668.1 18791 R 525909 CDS YP_003108669.1 256370845 8322067 20600..22321 1 NC_013124.1 KEGG: aau:AAur_3217 hypothetical protein; hypothetical protein 22321 8322067 Afer_0021 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108669.1 20600 D 525909 CDS YP_003108670.1 256370846 8322068 22318..23706 1 NC_013124.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: bln:Blon_0041 hypothetical protein; diguanylate phosphodiesterase 23706 8322068 Afer_0022 Acidimicrobium ferrooxidans DSM 10331 diguanylate phosphodiesterase YP_003108670.1 22318 D 525909 CDS YP_003108671.1 256370847 8322069 complement(23703..25091) 1 NC_013124.1 TIGRFAM: tRNA adenylyltransferase; metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: sgr:SGR_3683 RNA nucleotidyltransferase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 25091 8322069 Afer_0023 Acidimicrobium ferrooxidans DSM 10331 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_003108671.1 23703 R 525909 CDS YP_003108672.1 256370848 8322070 complement(25103..26134) 1 NC_013124.1 PFAM: histone deacetylase superfamily; KEGG: sul:SYO3AOP1_1212 histone deacetylase superfamily; histone deacetylase superfamily 26134 8322070 Afer_0024 Acidimicrobium ferrooxidans DSM 10331 histone deacetylase superfamily YP_003108672.1 25103 R 525909 CDS YP_003108673.1 256370849 8322071 26239..26946 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_1705 GCN5-related N- acetyltransferase; GCN5-like N-acetyltransferase 26946 8322071 Afer_0025 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003108673.1 26239 D 525909 CDS YP_003108674.1 256370850 8322072 26927..28705 1 NC_013124.1 KEGG: GF17743 gene product from transcript GF17743- RA; hypothetical protein 28705 8322072 Afer_0026 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108674.1 26927 D 525909 CDS YP_003108675.1 256370851 8322073 28705..30312 1 NC_013124.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: fal:FRAAL6865 hypothetical protein; integral membrane protein MviN 30312 8322073 Afer_0027 Acidimicrobium ferrooxidans DSM 10331 integral membrane protein MviN YP_003108675.1 28705 D 525909 CDS YP_003108676.1 256370852 8322074 30309..31151 1 NC_013124.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: hau:Haur_0363 DegV family protein; degV family protein 31151 8322074 Afer_0028 Acidimicrobium ferrooxidans DSM 10331 degV family protein YP_003108676.1 30309 D 525909 CDS YP_003108677.1 256370853 8322075 31219..31545 1 NC_013124.1 hypothetical protein 31545 8322075 Afer_0029 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108677.1 31219 D 525909 CDS YP_003108678.1 256370854 8322076 31574..32536 1 NC_013124.1 KEGG: fra:Francci3_4536 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; thioredoxin reductase 32536 8322076 Afer_0030 Acidimicrobium ferrooxidans DSM 10331 thioredoxin reductase YP_003108678.1 31574 D 525909 CDS YP_003108679.1 256370855 8322077 32599..32931 1 NC_013124.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mmi:MMAR_5478 thioredoxin TrxC; thioredoxin 32931 8322077 Afer_0031 Acidimicrobium ferrooxidans DSM 10331 thioredoxin YP_003108679.1 32599 D 525909 CDS YP_003108680.1 256370856 8322078 32949..33920 1 NC_013124.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ace:Acel_2150 cell wall hydrolase/autolysin; peptidoglycan-binding domain 1 protein 33920 8322078 Afer_0032 Acidimicrobium ferrooxidans DSM 10331 peptidoglycan-binding domain 1 protein YP_003108680.1 32949 D 525909 CDS YP_003108681.1 256370857 8322080 34708..35217 1 NC_013124.1 PFAM: DNA polymerase beta domain protein region; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cmi:CMM_2452 Cro/CI family transcriptional regulator/nucleotidyltransferase; XRE family transcriptional regulator 35217 8322080 Afer_0033 Acidimicrobium ferrooxidans DSM 10331 XRE family transcriptional regulator YP_003108681.1 34708 D 525909 CDS YP_003108682.1 256370858 8322081 35214..35567 1 NC_013124.1 PFAM: protein of unknown function DUF86; KEGG: tel:tll2231 hypothetical protein; hypothetical protein 35567 8322081 Afer_0034 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108682.1 35214 D 525909 CDS YP_003108683.1 256370859 8322082 complement(35856..36818) 1 NC_013124.1 KEGG: fjo:Fjoh_1984 proline-specific peptidase; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold; proline-specific peptidase 36818 8322082 Afer_0035 Acidimicrobium ferrooxidans DSM 10331 proline-specific peptidase YP_003108683.1 35856 R 525909 CDS YP_003108684.1 256370860 8322083 36917..38089 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: cma:Cmaq_1162 major facilitator transporter; major facilitator superfamily protein 38089 8322083 Afer_0036 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003108684.1 36917 D 525909 CDS YP_003108685.1 256370861 8322084 complement(38103..39182) 1 NC_013124.1 PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: saq:Sare_5081 myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase 39182 8322084 Afer_0037 Acidimicrobium ferrooxidans DSM 10331 Myo-inositol-1-phosphate synthase YP_003108685.1 38103 R 525909 CDS YP_003108686.1 256370862 8322085 complement(39269..39862) 1 NC_013124.1 PFAM: transcriptional regulator PadR family protein; KEGG: fra:Francci3_4528 PadR family transcriptional regulator; PadR family transcriptional regulator 39862 8322085 Afer_0038 Acidimicrobium ferrooxidans DSM 10331 PadR family transcriptional regulator YP_003108686.1 39269 R 525909 CDS YP_003108687.1 256370863 8322086 39960..40349 1 NC_013124.1 KEGG: ace:Acel_2136 hypothetical protein; hypothetical protein 40349 8322086 Afer_0039 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108687.1 39960 D 525909 CDS YP_003108688.1 256370864 8322087 40429..41328 1 NC_013124.1 KEGG: bja:blr2101 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoatehydroxymethyltransferase 41328 8322087 Afer_0040 Acidimicrobium ferrooxidans DSM 10331 3-methyl-2-oxobutanoatehydroxymethyltransferase YP_003108688.1 40429 D 525909 CDS YP_003108689.1 256370865 8322088 complement(41325..43082) 1 NC_013124.1 KEGG: cya:CYA_1550 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; Hedgehog/intein hint domain protein; replicative DNA helicase 43082 8322088 Afer_0041 Acidimicrobium ferrooxidans DSM 10331 replicative DNA helicase YP_003108689.1 41325 R 525909 CDS YP_003108690.1 256370866 8322089 complement(43096..43548) 1 NC_013124.1 TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: fre:Franean1_7309 ribosomal protein L9; 50S ribosomal protein L9 43548 8322089 Afer_0042 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L9 YP_003108690.1 43096 R 525909 CDS YP_003108691.1 256370867 8322090 complement(43545..43952) 1 NC_013124.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: tfu:Tfu_3093 30S ribosomal protein S18; 30S ribosomal protein S18 43952 8322090 Afer_0043 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S18 YP_003108691.1 43545 R 525909 CDS YP_003108692.1 256370868 8322091 complement(43956..44402) 1 NC_013124.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: fal:FRAAL6852 single-strand DNA-binding protein; single-strand binding protein 44402 8322091 Afer_0044 Acidimicrobium ferrooxidans DSM 10331 single-strand binding protein YP_003108692.1 43956 R 525909 CDS YP_003108693.1 256370869 8322092 complement(44430..44768) 1 NC_013124.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: tte:TTE2781 30S ribosomal protein S6; 30S ribosomal protein S6 44768 8322092 Afer_0045 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S6 YP_003108693.1 44430 R 525909 CDS YP_003108694.1 256370870 8322093 complement(44852..45481) 1 NC_013124.1 hypothetical protein 45481 8322093 Afer_0046 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108694.1 44852 R 525909 CDS YP_003108695.1 256370871 8322094 45648..46052 1 NC_013124.1 hypothetical protein 46052 8322094 Afer_0047 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108695.1 45648 D 525909 CDS YP_003108696.1 256370872 8322095 46052..46750 1 NC_013124.1 hypothetical protein 46750 8322095 Afer_0048 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108696.1 46052 D 525909 CDS YP_003108697.1 256370873 8322096 complement(46722..47768) 1 NC_013124.1 PFAM: sodium/hydrogen exchanger; KEGG: ank:AnaeK_3726 sodium/hydrogen exchanger; sodium/hydrogen exchanger 47768 8322096 Afer_0049 Acidimicrobium ferrooxidans DSM 10331 sodium/hydrogen exchanger YP_003108697.1 46722 R 525909 CDS YP_003108698.1 256370874 8322097 47864..48529 1 NC_013124.1 PFAM: Secreted repeat of unknown function; KEGG: ace:Acel_0027 hypothetical protein; hypothetical protein 48529 8322097 Afer_0050 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108698.1 47864 D 525909 CDS YP_003108699.1 256370875 8322098 complement(48548..50578) 1 NC_013124.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: fre:Franean1_0238 hypothetical protein; hypothetical protein 50578 8322098 Afer_0051 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108699.1 48548 R 525909 CDS YP_003108700.1 256370876 8322099 complement(50613..51218) 1 NC_013124.1 TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; KEGG: mva:Mvan_0589 deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 51218 8322099 Afer_0052 Acidimicrobium ferrooxidans DSM 10331 deoxycytidine triphosphate deaminase YP_003108700.1 50613 R 525909 CDS YP_003108701.1 256370877 8322103 complement(53466..54029) 1 NC_013124.1 KEGG: mbb:BCG_3106 hypothetical protein; hypothetical protein 54029 8322103 Afer_0055 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108701.1 53466 R 525909 CDS YP_003108702.1 256370878 8322104 complement(54022..54441) 1 NC_013124.1 KEGG: fre:Franean1_6980 hypothetical protein; hypothetical protein 54441 8322104 Afer_0056 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108702.1 54022 R 525909 CDS YP_003108703.1 256370879 8322107 complement(55114..55506) 1 NC_013124.1 hypothetical protein 55506 8322107 Afer_0059 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108703.1 55114 R 525909 CDS YP_003108704.1 256370880 8322108 complement(55510..55656) 1 NC_013124.1 hypothetical protein 55656 8322108 Afer_0060 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108704.1 55510 R 525909 CDS YP_003108705.1 256370881 8322109 55830..56504 1 NC_013124.1 PFAM: regulatory protein TetR; KEGG: gvi:gll0671 TetR family transcriptional regulatory protein; TetR family transcriptional regulator 56504 8322109 Afer_0061 Acidimicrobium ferrooxidans DSM 10331 TetR family transcriptional regulator YP_003108705.1 55830 D 525909 CDS YP_003108706.1 256370882 8322110 56501..57106 1 NC_013124.1 hypothetical protein 57106 8322110 Afer_0062 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108706.1 56501 D 525909 CDS YP_003108707.1 256370883 8322111 complement(57262..57585) 1 NC_013124.1 GntR family transcriptional regulator 57585 8322111 Afer_0063 Acidimicrobium ferrooxidans DSM 10331 GntR family transcriptional regulator YP_003108707.1 57262 R 525909 CDS YP_003108708.1 256370884 8322112 complement(58069..58872) 1 NC_013124.1 KEGG: fra:Francci3_4170 hypothetical protein; hypothetical protein 58872 8322112 Afer_0064 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108708.1 58069 R 525909 CDS YP_003108709.1 256370885 8322113 complement(59143..60279) 1 NC_013124.1 PFAM: glycoside hydrolase family 5; KEGG: hypothetical protein; glycoside hydrolase family protein 60279 8322113 Afer_0065 Acidimicrobium ferrooxidans DSM 10331 glycoside hydrolase family protein YP_003108709.1 59143 R 525909 CDS YP_003108710.1 256370886 8322114 complement(60276..60413) 1 NC_013124.1 hypothetical protein 60413 8322114 Afer_0066 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108710.1 60276 R 525909 CDS YP_003108711.1 256370887 8322115 60502..60822 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 60822 8322115 Afer_0067 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003108711.1 60502 D 525909 CDS YP_003108712.1 256370888 8322116 60822..61691 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_5060 integrase catalytic subunit; integrase catalytic subunit 61691 8322116 Afer_0068 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003108712.1 60822 D 525909 CDS YP_003108713.1 256370889 8322117 complement(61634..63103) 1 NC_013124.1 KEGG: mva:Mvan_4862 glycosyl transferase family protein; glycosyl transferase family protein 63103 8322117 Afer_0069 Acidimicrobium ferrooxidans DSM 10331 glycosyl transferase family protein YP_003108713.1 61634 R 525909 CDS YP_003108714.1 256370890 8322118 complement(63106..64401) 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: mva:Mvan_4863 glycosyl transferase family protein; family 2 glycosyl transferase 64401 8322118 Afer_0070 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003108714.1 63106 R 525909 CDS YP_003108715.1 256370891 8322119 65218..68322 1 NC_013124.1 KEGG: fal:FRAAL5406 glycine-rich cell wall structural protein precursor (partial match); hypothetical protein 68322 8322119 Afer_0071 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108715.1 65218 D 525909 CDS YP_003108716.1 256370892 8322120 68987..72292 1 NC_013124.1 PFAM: transcriptional activator domain; KEGG: mva:Mvan_1815 transcriptional regulator; transcriptional activator domain-containing protein 72292 8322120 Afer_0072 Acidimicrobium ferrooxidans DSM 10331 transcriptional activator domain-containing protein YP_003108716.1 68987 D 525909 CDS YP_003108717.1 256370893 8322121 72700..73662 1 NC_013124.1 PFAM: peptidase C60 sortase A and B; KEGG: met:M446_5133 peptidase C60 sortase A and B; peptidase C60 sortase A and B 73662 8322121 Afer_0073 Acidimicrobium ferrooxidans DSM 10331 peptidase C60 sortase A and B YP_003108717.1 72700 D 525909 CDS YP_003108718.1 256370894 8322122 complement(74290..75141) 1 NC_013124.1 PFAM: Patatin; KEGG: mmi:MMAR_2150 alpha-beta hydrolase superfamily esterase; Patatin 75141 8322122 Afer_0074 Acidimicrobium ferrooxidans DSM 10331 Patatin YP_003108718.1 74290 R 525909 CDS YP_003108719.1 256370895 8322123 complement(75157..75684) 1 NC_013124.1 PFAM: regulatory protein MarR; regulatory protein Crp; SMART: regulatory protein MarR; KEGG: esi:Exig_2989 MarR family transcriptional regulator; MarR family transcriptional regulator 75684 8322123 Afer_0075 Acidimicrobium ferrooxidans DSM 10331 MarR family transcriptional regulator YP_003108719.1 75157 R 525909 CDS YP_003108720.1 256370896 8322124 75804..77180 1 NC_013124.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: fra:Francci3_0279 pyridoxal-dependent decarboxylase; Pyridoxal-dependent decarboxylase 77180 8322124 Afer_0076 Acidimicrobium ferrooxidans DSM 10331 Pyridoxal-dependent decarboxylase YP_003108720.1 75804 D 525909 CDS YP_003108721.1 256370897 8322125 77177..77593 1 NC_013124.1 PFAM: histidine triad (HIT) protein; KEGG: pna:Pnap_4872 histidine triad (HIT) protein; histidine triad (HIT) protein 77593 8322125 Afer_0077 Acidimicrobium ferrooxidans DSM 10331 histidine triad (HIT) protein YP_003108721.1 77177 D 525909 CDS YP_003108722.1 256370898 8322126 complement(77770..78975) 1 NC_013124.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: saq:Sare_2891 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 78975 8322126 Afer_0078 Acidimicrobium ferrooxidans DSM 10331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003108722.1 77770 R 525909 CDS YP_003108723.1 256370899 8322127 complement(79073..79510) 1 NC_013124.1 PFAM: CoA-binding domain protein; KEGG: spe:Spro_1762 CoA-binding domain-containing protein; CoA-binding domain-containing protein 79510 8322127 Afer_0079 Acidimicrobium ferrooxidans DSM 10331 CoA-binding domain-containing protein YP_003108723.1 79073 R 525909 CDS YP_003108724.1 256370900 8322128 complement(79510..80421) 1 NC_013124.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: nca:Noca_1946 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 80421 8322128 Afer_0080 Acidimicrobium ferrooxidans DSM 10331 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_003108724.1 79510 R 525909 CDS YP_003108725.1 256370901 8322129 complement(81088..83178) 1 NC_013124.1 PFAM: Peptidase S53 propeptide; KEGG: cac:CAC0625 periplasmic aspartyl protease; peptidase S53 propeptide 83178 8322129 Afer_0081 Acidimicrobium ferrooxidans DSM 10331 peptidase S53 propeptide YP_003108725.1 81088 R 525909 CDS YP_003108726.1 256370902 8322130 complement(83357..84634) 1 NC_013124.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: cms:CMS_2457 histidyl-tRNA synthetase; Histidine--tRNA ligase 84634 8322130 Afer_0082 Acidimicrobium ferrooxidans DSM 10331 Histidine--tRNA ligase YP_003108726.1 83357 R 525909 CDS YP_003108727.1 256370903 8322131 84769..85296 1 NC_013124.1 PFAM: Secreted repeat of unknown function; KEGG: ace:Acel_0027 hypothetical protein; hypothetical protein 85296 8322131 Afer_0083 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108727.1 84769 D 525909 CDS YP_003108728.1 256370904 8322132 85398..87116 1 NC_013124.1 KEGG: chy:CHY_0699 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; adenine deaminase 87116 8322132 Afer_0084 Acidimicrobium ferrooxidans DSM 10331 adenine deaminase YP_003108728.1 85398 D 525909 CDS YP_003108729.1 256370905 8322133 87173..88348 1 NC_013124.1 KEGG: rrs:RoseRS_2545 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 88348 8322133 Afer_0085 Acidimicrobium ferrooxidans DSM 10331 acetyl-CoA acetyltransferase YP_003108729.1 87173 D 525909 CDS YP_003108730.1 256370906 8322134 88349..88942 1 NC_013124.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mem:Memar_0072 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 88942 8322134 Afer_0086 Acidimicrobium ferrooxidans DSM 10331 glutamine amidotransferase of anthranilate synthase YP_003108730.1 88349 D 525909 CDS YP_003108731.1 256370907 8322135 complement(89146..91083) 1 NC_013124.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: rxy:Rxyl_0021 serine/threonine protein kinase; serine/threonine protein kinase with PASTA sensor(s) 91083 8322135 Afer_0087 Acidimicrobium ferrooxidans DSM 10331 serine/threonine protein kinase with PASTA sensor(s) YP_003108731.1 89146 R 525909 CDS YP_003108732.1 256370908 8322136 complement(91136..92698) 1 NC_013124.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: kra:Krad_0072 protein kinase; serine/threonine protein kinase with PASTA sensor(s) 92698 8322136 Afer_0088 Acidimicrobium ferrooxidans DSM 10331 serine/threonine protein kinase with PASTA sensor(s) YP_003108732.1 91136 R 525909 CDS YP_003108733.1 256370909 8322137 complement(92695..94176) 1 NC_013124.1 PFAM: penicillin-binding protein transpeptidase; KEGG: ace:Acel_0020 peptidoglycan glycosyltransferase; penicillin-binding protein transpeptidase 94176 8322137 Afer_0089 Acidimicrobium ferrooxidans DSM 10331 penicillin-binding protein transpeptidase YP_003108733.1 92695 R 525909 CDS YP_003108734.1 256370910 8322138 complement(94169..95437) 1 NC_013124.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: nfa:nfa840 protein phosphatase; protein serine/threonine phosphatase 95437 8322138 Afer_0090 Acidimicrobium ferrooxidans DSM 10331 protein serine/threonine phosphatase YP_003108734.1 94169 R 525909 CDS YP_003108735.1 256370911 8322139 complement(95437..95949) 1 NC_013124.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: cef:CE0038 hypothetical protein; FHA domain-containing protein 95949 8322139 Afer_0091 Acidimicrobium ferrooxidans DSM 10331 FHA domain-containing protein YP_003108735.1 95437 R 525909 CDS YP_003108736.1 256370912 8322140 complement(95954..96613) 1 NC_013124.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: art:Arth_0026 FHA domain containing protein; FHA domain-containing protein 96613 8322140 Afer_0092 Acidimicrobium ferrooxidans DSM 10331 FHA domain-containing protein YP_003108736.1 95954 R 525909 CDS YP_003108737.1 256370913 8322142 96927..97475 1 NC_013124.1 KEGG: sma:SAV_5828 hypothetical protein; hypothetical protein 97475 8322142 Afer_0093 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108737.1 96927 D 525909 CDS YP_003108738.1 256370914 8322143 complement(97465..99531) 1 NC_013124.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 99531 8322143 Afer_0094 Acidimicrobium ferrooxidans DSM 10331 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase YP_003108738.1 97465 R 525909 CDS YP_003108739.1 256370915 8322145 100027..100710 1 NC_013124.1 KEGG: sai:Saci_2099 hypothetical protein; hypothetical protein 100710 8322145 Afer_0095 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108739.1 100027 D 525909 CDS YP_003108740.1 256370916 8322146 100769..101734 1 NC_013124.1 KEGG: mab:MAB_0355 ammonium transporter; hypothetical protein 101734 8322146 Afer_0096 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108740.1 100769 D 525909 CDS YP_003108741.1 256370917 8322148 complement(102542..103462) 1 NC_013124.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: ade:Adeh_1779 prephenate dehydratase; Prephenate dehydratase 103462 8322148 Afer_0097 Acidimicrobium ferrooxidans DSM 10331 Prephenate dehydratase YP_003108741.1 102542 R 525909 CDS YP_003108742.1 256370918 8322149 103515..104228 1 NC_013124.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; KEGG: mrd:Mrad2831_1356 circadian phase modifier CpmA-like protein; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 104228 8322149 Afer_0098 Acidimicrobium ferrooxidans DSM 10331 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003108742.1 103515 D 525909 CDS YP_003108743.1 256370919 8322150 104225..105385 1 NC_013124.1 PFAM: protein of unknown function DUF111; KEGG: mem:Memar_2158 hypothetical protein; hypothetical protein 105385 8322150 Afer_0099 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108743.1 104225 D 525909 CDS YP_003108744.1 256370920 8322151 105406..106413 1 NC_013124.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: acr:Acry_0942 alpha/beta hydrolase domain- containing protein; Alpha/beta hydrolase fold-3 domain-containing protein 106413 8322151 Afer_0100 Acidimicrobium ferrooxidans DSM 10331 Alpha/beta hydrolase fold-3 domain-containing protein YP_003108744.1 105406 D 525909 CDS YP_003108745.1 256370921 8322152 complement(106429..108747) 1 NC_013124.1 KEGG: afe:Lferr_1558 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 108747 8322152 Afer_0101 Acidimicrobium ferrooxidans DSM 10331 phosphoenolpyruvate carboxylase YP_003108745.1 106429 R 525909 CDS YP_003108746.1 256370922 8322155 109303..111210 1 NC_013124.1 KEGG: mta:Moth_0027 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 111210 8322155 Afer_0102 Acidimicrobium ferrooxidans DSM 10331 DNA polymerase III subunits gamma and tau YP_003108746.1 109303 D 525909 CDS YP_003108747.1 256370923 8322156 111207..111824 1 NC_013124.1 KEGG: tfu:Tfu_0044 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; recombination protein RecR 111824 8322156 Afer_0103 Acidimicrobium ferrooxidans DSM 10331 recombination protein RecR YP_003108747.1 111207 D 525909 CDS YP_003108748.1 256370924 8322157 complement(111825..112238) 1 NC_013124.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pho:PH0272 hypothetical protein; methylmalonyl-CoA epimerase 112238 8322157 Afer_0104 Acidimicrobium ferrooxidans DSM 10331 methylmalonyl-CoA epimerase YP_003108748.1 111825 R 525909 CDS YP_003108749.1 256370925 8322158 complement(112225..113619) 1 NC_013124.1 TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_3612 crotonyl-CoA reductase; crotonyl-CoA reductase 113619 8322158 Afer_0105 Acidimicrobium ferrooxidans DSM 10331 crotonyl-CoA reductase YP_003108749.1 112225 R 525909 CDS YP_003108750.1 256370926 8322159 113765..114961 1 NC_013124.1 KEGG: fal:FRAAL5910 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 114961 8322159 Afer_0106 Acidimicrobium ferrooxidans DSM 10331 acetyl-CoA acetyltransferase YP_003108750.1 113765 D 525909 CDS YP_003108751.1 256370927 8322160 115009..117996 1 NC_013124.1 PFAM: Methyltransferase type 11; glycosyl transferase group 1; Methionine biosynthesis MetW protein; Methyltransferase type 12; KEGG: pcu:pc1183 mannosyltransferase; type 11 methyltransferase 117996 8322160 Afer_0107 Acidimicrobium ferrooxidans DSM 10331 type 11 methyltransferase YP_003108751.1 115009 D 525909 CDS YP_003108752.1 256370928 8322161 complement(117974..118555) 1 NC_013124.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: dge:Dgeo_0070 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 118555 8322161 Afer_0108 Acidimicrobium ferrooxidans DSM 10331 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_003108752.1 117974 R 525909 CDS YP_003108753.1 256370929 8322162 complement(118617..119465) 1 NC_013124.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cya:CYA_1482 peptidylprolyl cis-trans isomerase, cyclophilin-type; cyclophilin type peptidyl-prolyl cis-trans isomerase 119465 8322162 Afer_0109 Acidimicrobium ferrooxidans DSM 10331 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_003108753.1 118617 R 525909 CDS YP_003108754.1 256370930 8322164 120908..122143 1 NC_013124.1 KEGG: kra:Krad_0463 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 122143 8322164 Afer_0111 Acidimicrobium ferrooxidans DSM 10331 aspartate kinase YP_003108754.1 120908 D 525909 CDS YP_003108755.1 256370931 8322165 122140..123165 1 NC_013124.1 KEGG: cms:CMS_0161 aspartate semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerization region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 123165 8322165 Afer_0112 Acidimicrobium ferrooxidans DSM 10331 aspartate-semialdehyde dehydrogenase YP_003108755.1 122140 D 525909 CDS YP_003108756.1 256370932 8322166 123288..124121 1 NC_013124.1 PFAM: flagellin domain protein; KEGG: sbn:Sbal195_3089 flagellin domain-containing protein; flagellin domain-containing protein 124121 8322166 Afer_0113 Acidimicrobium ferrooxidans DSM 10331 flagellin domain-containing protein YP_003108756.1 123288 D 525909 CDS YP_003108757.1 256370933 8322167 124213..126771 1 NC_013124.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: ace:Acel_0835 flagellar hook-associated 2 domain-containing protein; flagellar hook-associated 2 domain-containing protein 126771 8322167 Afer_0114 Acidimicrobium ferrooxidans DSM 10331 flagellar hook-associated 2 domain-containing protein YP_003108757.1 124213 D 525909 CDS YP_003108758.1 256370934 8322168 126819..127196 1 NC_013124.1 KEGG: ace:Acel_0836 flagellar protein FliS; flagellar protein FliS 127196 8322168 Afer_0115 Acidimicrobium ferrooxidans DSM 10331 flagellar protein FliS YP_003108758.1 126819 D 525909 CDS YP_003108759.1 256370935 8322169 127189..127476 1 NC_013124.1 hypothetical protein 127476 8322169 Afer_0116 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108759.1 127189 D 525909 CDS YP_003108760.1 256370936 8322171 128605..129324 1 NC_013124.1 KEGG: fal:FRAAL2980 ABC transporter transmembrane protein; ABC transporter transmembrane protein 129324 8322171 Afer_0118 Acidimicrobium ferrooxidans DSM 10331 ABC transporter transmembrane protein YP_003108760.1 128605 D 525909 CDS YP_003108761.1 256370937 8322172 129677..131098 1 NC_013124.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 131098 rbcL 8322172 rbcL Acidimicrobium ferrooxidans DSM 10331 ribulose bisophosphate carboxylase YP_003108761.1 129677 D 525909 CDS YP_003108762.1 256370938 8322173 131156..131494 1 NC_013124.1 PFAM: ribulose bisphosphate carboxylase small chain; KEGG: afe:Lferr_1388 ribulose-bisphosphate carboxylase; Ribulose-bisphosphate carboxylase 131494 8322173 Afer_0120 Acidimicrobium ferrooxidans DSM 10331 Ribulose-bisphosphate carboxylase YP_003108762.1 131156 D 525909 CDS YP_003108763.1 256370939 8322174 131672..133594 1 NC_013124.1 KEGG: afe:Lferr_1387 carboxysome structural protein CsoS2; carboxysome structural protein CsoS2 133594 8322174 Afer_0121 Acidimicrobium ferrooxidans DSM 10331 carboxysome structural protein CsoS2 YP_003108763.1 131672 D 525909 CDS YP_003108764.1 256370940 8322175 133623..135212 1 NC_013124.1 TIGRFAM: carboxysome shell carbonic anhydrase; KEGG: afe:Lferr_1386 carboxysome shell carbonic anhydrase; carboxysome shell carbonic anhydrase 135212 8322175 Afer_0122 Acidimicrobium ferrooxidans DSM 10331 carboxysome shell carbonic anhydrase YP_003108764.1 133623 D 525909 CDS YP_003108765.1 256370941 8322176 135209..135460 1 NC_013124.1 TIGRFAM: carboxysome peptide B; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: afe:Lferr_1385 carboxysome peptide A; carboxysome peptide B 135460 8322176 Afer_0123 Acidimicrobium ferrooxidans DSM 10331 carboxysome peptide B YP_003108765.1 135209 D 525909 CDS YP_003108766.1 256370942 8322177 135583..135894 1 NC_013124.1 PFAM: microcompartments protein; KEGG: tbd:Tbd_2645 carboxysome shell protein CsoS1A; microcompartments protein 135894 8322177 Afer_0124 Acidimicrobium ferrooxidans DSM 10331 microcompartments protein YP_003108766.1 135583 D 525909 CDS YP_003108767.1 256370943 8322178 135922..136233 1 NC_013124.1 PFAM: microcompartments protein; KEGG: tbd:Tbd_2645 carboxysome shell protein CsoS1A; microcompartments protein 136233 8322178 Afer_0125 Acidimicrobium ferrooxidans DSM 10331 microcompartments protein YP_003108767.1 135922 D 525909 CDS YP_003108768.1 256370944 8322179 136261..136584 1 NC_013124.1 PFAM: microcompartments protein; KEGG: tbd:Tbd_2645 carboxysome shell protein CsoS1A; microcompartments protein 136584 8322179 Afer_0126 Acidimicrobium ferrooxidans DSM 10331 microcompartments protein YP_003108768.1 136261 D 525909 CDS YP_003108769.1 256370945 8322180 136594..137049 1 NC_013124.1 PFAM: Ferritin Dps family protein; KEGG: afe:Lferr_1380 ferritin Dps family protein; Ferritin Dps family protein 137049 8322180 Afer_0127 Acidimicrobium ferrooxidans DSM 10331 Ferritin Dps family protein YP_003108769.1 136594 D 525909 CDS YP_003108770.1 256370946 8322181 137042..137302 1 NC_013124.1 KEGG: afe:Lferr_1379 hypothetical protein; hypothetical protein 137302 8322181 Afer_0128 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108770.1 137042 D 525909 CDS YP_003108771.1 256370947 8322182 137286..137939 1 NC_013124.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: afe:Lferr_1378 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase 137939 8322182 Afer_0129 Acidimicrobium ferrooxidans DSM 10331 Cobyrinic acid ac-diamide synthase YP_003108771.1 137286 D 525909 CDS YP_003108772.1 256370948 8322183 137939..138208 1 NC_013124.1 hypothetical protein 138208 8322183 Afer_0130 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108772.1 137939 D 525909 CDS YP_003108773.1 256370949 8322184 138312..139118 1 NC_013124.1 PFAM: CbbQ/NirQ/NorQ domain protein; ATPase associated with various cellular activities AAA_5; KEGG: afe:Lferr_1376 CbbQ/NirQ/NorQ domain protein; CbbQ/NirQ/NorQ domain-containing protein 139118 8322184 Afer_0131 Acidimicrobium ferrooxidans DSM 10331 CbbQ/NirQ/NorQ domain-containing protein YP_003108773.1 138312 D 525909 CDS YP_003108774.1 256370950 8322185 139131..141476 1 NC_013124.1 PFAM: von Willebrand factor A; SMART: von Willebrand factor A; KEGG: afe:Lferr_1375 von Willebrand factor A; von Willebrand factor A 141476 8322185 Afer_0132 Acidimicrobium ferrooxidans DSM 10331 von Willebrand factor A YP_003108774.1 139131 D 525909 CDS YP_003108775.1 256370951 8322186 141738..145886 1 NC_013124.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: afe:Lferr_1358 hypothetical protein; NADH dehydrogenase (quinone) 145886 8322186 Afer_0133 Acidimicrobium ferrooxidans DSM 10331 NADH dehydrogenase (quinone) YP_003108775.1 141738 D 525909 CDS YP_003108776.1 256370952 8322187 146084..146419 1 NC_013124.1 PFAM: flagellar basal body rod protein; KEGG: ace:Acel_0838 flagellar basal-body rod protein; flagellar basal body rod protein 146419 8322187 Afer_0134 Acidimicrobium ferrooxidans DSM 10331 flagellar basal body rod protein YP_003108776.1 146084 D 525909 CDS YP_003108777.1 256370953 8322188 146420..146854 1 NC_013124.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: kra:Krad_1648 hypothetical protein; hypothetical protein 146854 8322188 Afer_0135 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108777.1 146420 D 525909 CDS YP_003108778.1 256370954 8322189 146851..147147 1 NC_013124.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: ace:Acel_0840 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex protein FliE 147147 8322189 Afer_0136 Acidimicrobium ferrooxidans DSM 10331 flagellar hook-basal body complex protein FliE YP_003108778.1 146851 D 525909 CDS YP_003108779.1 256370955 8322190 147159..148700 1 NC_013124.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: ace:Acel_0841 flagellar M-ring protein FliF; flagellar M-ring protein FliF 148700 8322190 Afer_0137 Acidimicrobium ferrooxidans DSM 10331 flagellar M-ring protein FliF YP_003108779.1 147159 D 525909 CDS YP_003108780.1 256370956 8322191 148697..149710 1 NC_013124.1 TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: ace:Acel_0842 flagellar motor switch protein FliG; flagellar motor switch protein FliG 149710 8322191 Afer_0138 Acidimicrobium ferrooxidans DSM 10331 flagellar motor switch protein FliG YP_003108780.1 148697 D 525909 CDS YP_003108781.1 256370957 8322192 149707..150327 1 NC_013124.1 KEGG: dau:Daud_1763 flagellar biosynthesis/type III secretory pathway protein-like protein; hypothetical protein 150327 8322192 Afer_0139 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108781.1 149707 D 525909 CDS YP_003108782.1 256370958 8322193 150324..151634 1 NC_013124.1 KEGG: ace:Acel_0844 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; ATPase, FliI/YscN family 151634 8322193 Afer_0140 Acidimicrobium ferrooxidans DSM 10331 ATPase, FliI/YscN family YP_003108782.1 150324 D 525909 CDS YP_003108783.1 256370959 8322194 151631..152029 1 NC_013124.1 KEGG: rpt:Rpal_3033 hypothetical protein; hypothetical protein 152029 8322194 Afer_0141 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108783.1 151631 D 525909 CDS YP_003108784.1 256370960 8322195 152026..153138 1 NC_013124.1 PFAM: NLP/P60 protein; Lytic transglycosylase catalytic; Transglycosylase domain protein; KEGG: ace:Acel_0846 lytic transglycosylase, catalytic; NLP/P60 protein 153138 8322195 Afer_0142 Acidimicrobium ferrooxidans DSM 10331 NLP/P60 protein YP_003108784.1 152026 D 525909 CDS YP_003108785.1 256370961 8322196 153107..154495 1 NC_013124.1 KEGG: rci:RRC32 hypothetical protein; hypothetical protein 154495 8322196 Afer_0143 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108785.1 153107 D 525909 CDS YP_003108786.1 256370962 8322197 154521..155000 1 NC_013124.1 PFAM: flagellar hook capping protein; KEGG: rpc:RPC_0870 flagellar hook capping protein; flagellar hook capping protein 155000 8322197 Afer_0144 Acidimicrobium ferrooxidans DSM 10331 flagellar hook capping protein YP_003108786.1 154521 D 525909 CDS YP_003108787.1 256370963 8322198 155129..156424 1 NC_013124.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; KEGG: ace:Acel_0849 hypothetical protein; hypothetical protein 156424 8322198 Afer_0145 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108787.1 155129 D 525909 CDS YP_003108788.1 256370964 8322199 156521..156748 1 NC_013124.1 PFAM: flagellar FlbD family protein; KEGG: dsy:DSY2984 hypothetical protein; flagellar FlbD family protein 156748 8322199 Afer_0146 Acidimicrobium ferrooxidans DSM 10331 flagellar FlbD family protein YP_003108788.1 156521 D 525909 CDS YP_003108789.1 256370965 8322200 156752..157555 1 NC_013124.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ace:Acel_0851 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 157555 8322200 Afer_0147 Acidimicrobium ferrooxidans DSM 10331 MotA/TolQ/ExbB proton channel YP_003108789.1 156752 D 525909 CDS YP_003108790.1 256370966 8322201 157557..158333 1 NC_013124.1 PFAM: OmpA/MotB domain protein; KEGG: ace:Acel_0852 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 158333 8322201 Afer_0148 Acidimicrobium ferrooxidans DSM 10331 OmpA/MotB domain-containing protein YP_003108790.1 157557 D 525909 CDS YP_003108791.1 256370967 8322202 158394..158885 1 NC_013124.1 PFAM: flagellar basal body-associated protein FliL; KEGG: bpy:Bphyt_3776 flagellar basal body- associated protein FliL; flagellar basal body-associated protein FliL 158885 8322202 Afer_0149 Acidimicrobium ferrooxidans DSM 10331 flagellar basal body-associated protein FliL YP_003108791.1 158394 D 525909 CDS YP_003108792.1 256370968 8322203 158966..159874 1 NC_013124.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ace:Acel_0854 flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein 159874 8322203 Afer_0150 Acidimicrobium ferrooxidans DSM 10331 surface presentation of antigens (SPOA) protein YP_003108792.1 158966 D 525909 CDS YP_003108793.1 256370969 8322204 159867..160154 1 NC_013124.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: ace:Acel_0855 flagellar motor switch protein FliN; flagellar motor switch protein FliN 160154 8322204 Afer_0151 Acidimicrobium ferrooxidans DSM 10331 flagellar motor switch protein FliN YP_003108793.1 159867 D 525909 CDS YP_003108794.1 256370970 8322205 160160..160477 1 NC_013124.1 PFAM: flagellar biosynthesis protein FliO; KEGG: esa:ESA_01251 flagellar biosynthesis protein FliO; flagellar biosynthesis protein FliO 160477 8322205 Afer_0152 Acidimicrobium ferrooxidans DSM 10331 flagellar biosynthesis protein FliO YP_003108794.1 160160 D 525909 CDS YP_003108795.1 256370971 8322206 160499..160828 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 160828 8322206 Afer_0153 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003108795.1 160499 D 525909 CDS YP_003108796.1 256370972 8322207 160825..161703 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: amr:AM1_A0193 integrase, catalytic region; integrase catalytic subunit 161703 8322207 Afer_0154 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003108796.1 160825 D 525909 CDS YP_003108797.1 256370973 8322208 161843..162532 1 NC_013124.1 KEGG: ace:Acel_0857 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 162532 8322208 Afer_0155 Acidimicrobium ferrooxidans DSM 10331 flagellar biosynthetic protein FliP YP_003108797.1 161843 D 525909 CDS YP_003108798.1 256370974 8322209 162549..162824 1 NC_013124.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: dsy:DSY2977 hypothetical protein; flagellar biosynthetic protein FliQ 162824 8322209 Afer_0156 Acidimicrobium ferrooxidans DSM 10331 flagellar biosynthetic protein FliQ YP_003108798.1 162549 D 525909 CDS YP_003108799.1 256370975 8322210 162834..163574 1 NC_013124.1 KEGG: nca:Noca_0741 flagellar biosynthetic protein FliR; flagellar biosynthesis pathway protein 163574 8322210 Afer_0157 Acidimicrobium ferrooxidans DSM 10331 flagellar biosynthesis pathway protein YP_003108799.1 162834 D 525909 CDS YP_003108800.1 256370976 8322211 163577..164749 1 NC_013124.1 PFAM: type III secretion exporter; KEGG: ace:Acel_0860 type III secretion exporter; type III secretion exporter 164749 8322211 Afer_0158 Acidimicrobium ferrooxidans DSM 10331 type III secretion exporter YP_003108800.1 163577 D 525909 CDS YP_003108801.1 256370977 8322212 164830..166860 1 NC_013124.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: ace:Acel_0861 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 166860 8322212 Afer_0159 Acidimicrobium ferrooxidans DSM 10331 flagellar biosynthesis protein FlhA YP_003108801.1 164830 D 525909 CDS YP_003108802.1 256370978 8322213 166832..167770 1 NC_013124.1 KEGG: GE25240 gene product from transcript GE25240- RA; hypothetical protein 167770 8322213 Afer_0160 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108802.1 166832 D 525909 CDS YP_003108803.1 256370979 8322214 167773..168042 1 NC_013124.1 hypothetical protein 168042 8322214 Afer_0161 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108803.1 167773 D 525909 CDS YP_003108804.1 256370980 8322215 complement(168126..168452) 1 NC_013124.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: rha:RHA1_ro11237 sulfurtransferase, rhodanese related; Rhodanese domain-containing protein 168452 8322215 Afer_0162 Acidimicrobium ferrooxidans DSM 10331 Rhodanese domain-containing protein YP_003108804.1 168126 R 525909 CDS YP_003108805.1 256370981 8322216 complement(168652..169863) 1 NC_013124.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: lbf:LBF_2704 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 169863 8322216 Afer_0163 Acidimicrobium ferrooxidans DSM 10331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003108805.1 168652 R 525909 CDS YP_003108806.1 256370982 8322217 169989..171050 1 NC_013124.1 KEGG: fal:FRAAL5776 Fe-S-cluster redox enzyme; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM enzyme, Cfr family 171050 8322217 Afer_0164 Acidimicrobium ferrooxidans DSM 10331 radical SAM enzyme, Cfr family YP_003108806.1 169989 D 525909 CDS YP_003108807.1 256370983 8322218 171148..171822 1 NC_013124.1 KEGG: afw:Anae109_0447 ribulose-phosphate 3- epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 171822 8322218 Afer_0165 Acidimicrobium ferrooxidans DSM 10331 ribulose-phosphate 3-epimerase YP_003108807.1 171148 D 525909 CDS YP_003108808.1 256370984 8322219 171819..174749 1 NC_013124.1 TIGRFAM: transketolase; fructose-1,6- bisphosphatase, class II; PFAM: GlpX family protein; Transketolase domain protein; Transketolase central region; KEGG: ttj:TTHA0108 transketolase; transketolase 174749 8322219 Afer_0166 Acidimicrobium ferrooxidans DSM 10331 transketolase YP_003108808.1 171819 D 525909 CDS YP_003108809.1 256370985 8322220 174746..175714 1 NC_013124.1 Catalyzes a reaction in which the CO2 acceptor molecule, RuBP, is generated via the phosphorylation of ribulose 5-phosphate with ATP; phosphoribulokinase 175714 8322220 Afer_0167 Acidimicrobium ferrooxidans DSM 10331 phosphoribulokinase YP_003108809.1 174746 D 525909 CDS YP_003108810.1 256370986 8322221 complement(175731..176504) 1 NC_013124.1 PFAM: MgtC/SapB transporter; KEGG: cyb:CYB_2116 MgtC family protein; MgtC/SapB transporter 176504 8322221 Afer_0168 Acidimicrobium ferrooxidans DSM 10331 MgtC/SapB transporter YP_003108810.1 175731 R 525909 CDS YP_003108811.1 256370987 8322222 176834..177967 1 NC_013124.1 KEGG: sgr:SGR_2421 LacI family transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 177967 8322222 Afer_0169 Acidimicrobium ferrooxidans DSM 10331 LacI family transcriptional regulator YP_003108811.1 176834 D 525909 CDS YP_003108812.1 256370988 8322223 177964..179799 1 NC_013124.1 PFAM: glycoside hydrolase family 39; KEGG: xca:xccb100_4166 exported xylan 1,4-beta- xylosidase; Xylan 1,4-beta-xylosidase 179799 8322223 Afer_0170 Acidimicrobium ferrooxidans DSM 10331 Xylan 1,4-beta-xylosidase YP_003108812.1 177964 D 525909 CDS YP_003108813.1 256370989 8322224 179952..181574 1 NC_013124.1 PFAM: extracellular solute-binding protein family 5; KEGG: lxx:Lxx23050 ABC transporter, substrate binding protein; family 5 extracellular solute-binding protein 181574 8322224 Afer_0171 Acidimicrobium ferrooxidans DSM 10331 family 5 extracellular solute-binding protein YP_003108813.1 179952 D 525909 CDS YP_003108814.1 256370990 8322225 181635..182615 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_6552 oligopeptide/dipeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 182615 8322225 Afer_0172 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003108814.1 181635 D 525909 CDS YP_003108815.1 256370991 8322226 182612..183541 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lxx:Lxx23070 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 183541 8322226 Afer_0173 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003108815.1 182612 D 525909 CDS YP_003108816.1 256370992 8322227 183538..184509 1 NC_013124.1 KEGG: reh:H16_A1303 ABC-type transporter, ATPase component: PepT family; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 184509 8322227 Afer_0174 Acidimicrobium ferrooxidans DSM 10331 oligopeptide/dipeptide ABC transporter ATPase subunit YP_003108816.1 183538 D 525909 CDS YP_003108817.1 256370993 8322228 184506..185306 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6554 oligopeptide/dipeptide ABC transporter, ATP-binding protein; ABC transporter-like protein 185306 8322228 Afer_0175 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003108817.1 184506 D 525909 CDS YP_003108818.1 256370994 8322229 185338..186249 1 NC_013124.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_1827 LysR family transcriptional regulator; LysR family transcriptional regulator 186249 8322229 Afer_0176 Acidimicrobium ferrooxidans DSM 10331 LysR family transcriptional regulator YP_003108818.1 185338 D 525909 CDS YP_003108819.1 256370995 8322230 186361..187344 1 NC_013124.1 PFAM: fructose-bisphosphate aldolase class-I; KEGG: ter:Tery_1687 fructose-bisphosphate aldolase; Fructose-bisphosphate aldolase 187344 8322230 Afer_0177 Acidimicrobium ferrooxidans DSM 10331 Fructose-bisphosphate aldolase YP_003108819.1 186361 D 525909 CDS YP_003108820.1 256370996 8322231 187378..187575 1 NC_013124.1 hypothetical protein 187575 8322231 Afer_0178 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108820.1 187378 D 525909 CDS YP_003108821.1 256370997 8322232 187559..187810 1 NC_013124.1 PFAM: thiamineS protein; KEGG: afw:Anae109_1160 molybdopterin converting factor, subunit 1; sulfur transfer protein ThiS 187810 8322232 Afer_0179 Acidimicrobium ferrooxidans DSM 10331 sulfur transfer protein ThiS YP_003108821.1 187559 D 525909 CDS YP_003108822.1 256370998 8322233 187810..188460 1 NC_013124.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: mva:Mvan_1358 two component LuxR family transcriptional regulator; LuxR family two component transcriptional regulator 188460 8322233 Afer_0180 Acidimicrobium ferrooxidans DSM 10331 LuxR family two component transcriptional regulator YP_003108822.1 187810 D 525909 CDS YP_003108823.1 256370999 8322234 188457..189623 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase dimerization and phosphoacceptor region; SMART: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: mkm:Mkms_1071 GAF sensor signal transduction histidine kinase; GAF sensor signal transduction histidine kinase 189623 8322234 Afer_0181 Acidimicrobium ferrooxidans DSM 10331 GAF sensor signal transduction histidine kinase YP_003108823.1 188457 D 525909 CDS YP_003108824.1 256371000 8322235 189674..190645 1 NC_013124.1 KEGG: dge:Dgeo_2370 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 190645 8322235 Afer_0182 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase YP_003108824.1 189674 D 525909 CDS YP_003108825.1 256371001 8322236 190753..191730 1 NC_013124.1 PFAM: Transglycosylase domain protein; KEGG: fre:Franean1_0215 transglycosylase domain- containing protein; transglycosylase domain-containing protein 191730 8322236 Afer_0183 Acidimicrobium ferrooxidans DSM 10331 transglycosylase domain-containing protein YP_003108825.1 190753 D 525909 CDS YP_003108826.1 256371002 8322237 complement(191863..192150) 1 NC_013124.1 KEGG: ace:Acel_1424 hypothetical protein; hypothetical protein 192150 8322237 Afer_0184 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108826.1 191863 R 525909 CDS YP_003108827.1 256371003 8322238 complement(192153..192893) 1 NC_013124.1 PFAM: dienelactone hydrolase; KEGG: ace:Acel_1423 carboxymethylenebutenolidase; dienelactone hydrolase 192893 8322238 Afer_0185 Acidimicrobium ferrooxidans DSM 10331 dienelactone hydrolase YP_003108827.1 192153 R 525909 CDS YP_003108828.1 256371004 8322239 complement(193043..193543) 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_3058 hypothetical protein; GCN5-like N-acetyltransferase 193543 8322239 Afer_0186 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003108828.1 193043 R 525909 CDS YP_003108829.1 256371005 8322240 complement(193553..193930) 1 NC_013124.1 KEGG: fra:Francci3_0680 succinate dehydrogenase subunit D; succinate dehydrogenase subunit D 193930 8322240 Afer_0187 Acidimicrobium ferrooxidans DSM 10331 succinate dehydrogenase subunit D YP_003108829.1 193553 R 525909 CDS YP_003108830.1 256371006 8322241 complement(193932..194348) 1 NC_013124.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: kra:Krad_3952 succinate dehydrogenase cytochrome b556 subunit; succinate dehydrogenase, cytochrome b556 subunit 194348 8322241 Afer_0188 Acidimicrobium ferrooxidans DSM 10331 succinate dehydrogenase, cytochrome b556 subunit YP_003108830.1 193932 R 525909 CDS YP_003108831.1 256371007 8322242 complement(194345..194491) 1 NC_013124.1 hypothetical protein 194491 8322242 Afer_0189 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108831.1 194345 R 525909 CDS YP_003108832.1 256371008 8322243 complement(194661..195977) 1 NC_013124.1 KEGG: gtn:GTNG_0013 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like; seryl-tRNA synthetase 195977 8322243 Afer_0190 Acidimicrobium ferrooxidans DSM 10331 seryl-tRNA synthetase YP_003108832.1 194661 R 525909 CDS YP_003108833.1 256371009 8322244 196000..196917 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1989 ABC-type multidrug transport system ATPase componen; ABC transporter-like protein 196917 8322244 Afer_0191 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003108833.1 196000 D 525909 CDS YP_003108834.1 256371010 8322245 196914..197648 1 NC_013124.1 PFAM: ABC-2 type transporter; KEGG: fre:Franean1_2079 ABC-2 type transporter; ABC-2 type transporter 197648 8322245 Afer_0192 Acidimicrobium ferrooxidans DSM 10331 ABC-2 type transporter YP_003108834.1 196914 D 525909 CDS YP_003108835.1 256371011 8322246 197694..198659 1 NC_013124.1 PFAM: cytochrome oxidase assembly; KEGG: fra:Francci3_1653 cytochrome oxidase assembly; cytochrome oxidase assembly 198659 8322246 Afer_0193 Acidimicrobium ferrooxidans DSM 10331 cytochrome oxidase assembly YP_003108835.1 197694 D 525909 CDS YP_003108836.1 256371012 8322247 198714..199004 1 NC_013124.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rha:RHA1_ro01441 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 199004 8322247 Afer_0194 Acidimicrobium ferrooxidans DSM 10331 ATP-dependent Clp protease adaptor protein ClpS YP_003108836.1 198714 D 525909 CDS YP_003108837.1 256371013 8322248 199001..199426 1 NC_013124.1 hypothetical protein 199426 8322248 Afer_0195 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108837.1 199001 D 525909 CDS YP_003108838.1 256371014 8322249 complement(199581..201668) 1 NC_013124.1 PFAM: Peptidase S53 propeptide; KEGG: cac:CAC0625 periplasmic aspartyl protease; peptidase S53 propeptide 201668 8322249 Afer_0196 Acidimicrobium ferrooxidans DSM 10331 peptidase S53 propeptide YP_003108838.1 199581 R 525909 CDS YP_003108839.1 256371015 8322250 complement(202283..203239) 1 NC_013124.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tth:TTC1833 quinone oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 203239 8322250 Afer_0197 Acidimicrobium ferrooxidans DSM 10331 alcohol dehydrogenase zinc-binding domain-containing protein YP_003108839.1 202283 R 525909 CDS YP_003108840.1 256371016 8322251 203307..204533 1 NC_013124.1 PFAM: FAD dependent oxidoreductase; KEGG: tfu:Tfu_2797 D-amino-acid dehydrogenase; FAD dependent oxidoreductase 204533 8322251 Afer_0198 Acidimicrobium ferrooxidans DSM 10331 FAD dependent oxidoreductase YP_003108840.1 203307 D 525909 CDS YP_003108841.1 256371017 8322252 complement(204597..205049) 1 NC_013124.1 PFAM: ferric-uptake regulator; KEGG: fra:Francci3_2661 ferric uptake regulator family protein; Fur family ferric uptake regulator 205049 8322252 Afer_0199 Acidimicrobium ferrooxidans DSM 10331 Fur family ferric uptake regulator YP_003108841.1 204597 R 525909 CDS YP_003108842.1 256371018 8322253 complement(205042..205770) 1 NC_013124.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mab:MAB_4047c sensory transduction protein RegX3; winged helix family two component transcriptional regulator 205770 8322253 Afer_0200 Acidimicrobium ferrooxidans DSM 10331 winged helix family two component transcriptional regulator YP_003108842.1 205042 R 525909 CDS YP_003108843.1 256371019 8322254 complement(205760..206803) 1 NC_013124.1 KEGG: tfu:Tfu_2909 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase 206803 8322254 Afer_0201 Acidimicrobium ferrooxidans DSM 10331 histidine kinase YP_003108843.1 205760 R 525909 CDS YP_003108844.1 256371020 8322255 206934..207227 1 NC_013124.1 KEGG: fra:Francci3_0038 hypothetical protein; hypothetical protein 207227 8322255 Afer_0202 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108844.1 206934 D 525909 CDS YP_003108845.1 256371021 8322256 207231..208286 1 NC_013124.1 KEGG: sgr:SGR_3918 integral membrane protein; hypothetical protein 208286 8322256 Afer_0203 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108845.1 207231 D 525909 CDS YP_003108846.1 256371022 8322257 208283..209482 1 NC_013124.1 KEGG: fre:Franean1_1340 hypothetical protein; hypothetical protein 209482 8322257 Afer_0204 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108846.1 208283 D 525909 CDS YP_003108847.1 256371023 8322258 209473..210630 1 NC_013124.1 SMART: AAA ATPase; KEGG: sco:SCO6878 ATP-binding protein; AAA ATPase 210630 8322258 Afer_0205 Acidimicrobium ferrooxidans DSM 10331 AAA ATPase YP_003108847.1 209473 D 525909 CDS YP_003108848.1 256371024 8322259 210627..211787 1 NC_013124.1 KEGG: fre:Franean1_1381 type IV secretory pathway VirD4 protein-like protein; type IV secretory pathway VirD4 protein 211787 8322259 Afer_0206 Acidimicrobium ferrooxidans DSM 10331 type IV secretory pathway VirD4 protein YP_003108848.1 210627 D 525909 CDS YP_003108849.1 256371025 8322260 211818..212171 1 NC_013124.1 hypothetical protein 212171 8322260 Afer_0207 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108849.1 211818 D 525909 CDS YP_003108850.1 256371026 8322261 212168..213556 1 NC_013124.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: ace:Acel_0832 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 213556 8322261 Afer_0208 Acidimicrobium ferrooxidans DSM 10331 flagellar hook-associated protein FlgK YP_003108850.1 212168 D 525909 CDS YP_003108851.1 256371027 8322262 213565..214470 1 NC_013124.1 KEGG: ace:Acel_0831 flagellar hook-associated protein 3; flagellar hook-associated protein 3 214470 8322262 Afer_0209 Acidimicrobium ferrooxidans DSM 10331 flagellar hook-associated protein 3 YP_003108851.1 213565 D 525909 CDS YP_003108852.1 256371028 8322263 214508..214978 1 NC_013124.1 PFAM: protein of unknown function DUF180; KEGG: tte:TTE0497 flagellar assembly protein FliW; hypothetical protein 214978 8322263 Afer_0210 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108852.1 214508 D 525909 CDS YP_003108853.1 256371029 8322264 complement(215345..215587) 1 NC_013124.1 TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: hmo:HM1_1209 carbon storage regulator; carbon storage regulator CsrA 215587 8322264 Afer_0211 Acidimicrobium ferrooxidans DSM 10331 carbon storage regulator CsrA YP_003108853.1 215345 R 525909 CDS YP_003108854.1 256371030 8322265 215819..218005 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 218005 8322265 Afer_0212 Acidimicrobium ferrooxidans DSM 10331 CheA signal transduction histidine kinase YP_003108854.1 215819 D 525909 CDS YP_003108855.1 256371031 8322266 217998..218423 1 NC_013124.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: kra:Krad_0315 CheW protein; CheW protein 218423 8322266 Afer_0213 Acidimicrobium ferrooxidans DSM 10331 CheW protein YP_003108855.1 217998 D 525909 CDS YP_003108856.1 256371032 8322267 218420..219604 1 NC_013124.1 KEGG: nca:Noca_3599 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 219604 8322267 Afer_0214 Acidimicrobium ferrooxidans DSM 10331 response regulator receiver modulated CheB methylesterase YP_003108856.1 218420 D 525909 CDS YP_003108857.1 256371033 8322268 219604..220488 1 NC_013124.1 KEGG: bbt:BBta_0527 MCP methyltransferase, CheR- type; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; CheR-type MCP methyltransferase 220488 8322268 Afer_0215 Acidimicrobium ferrooxidans DSM 10331 CheR-type MCP methyltransferase YP_003108857.1 219604 D 525909 CDS YP_003108858.1 256371034 8322269 220475..221347 1 NC_013124.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: dau:Daud_0059 GntR family transcriptional regulator; GntR family transcriptional regulator 221347 8322269 Afer_0216 Acidimicrobium ferrooxidans DSM 10331 GntR family transcriptional regulator YP_003108858.1 220475 D 525909 CDS YP_003108859.1 256371035 8322270 221423..221791 1 NC_013124.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: kra:Krad_0325 response regulator receiver protein; response regulator receiver protein 221791 8322270 Afer_0217 Acidimicrobium ferrooxidans DSM 10331 response regulator receiver protein YP_003108859.1 221423 D 525909 CDS YP_003108860.1 256371036 8322271 221788..222276 1 NC_013124.1 KEGG: bvi:Bcep1808_5226 protease Do; hypothetical protein 222276 8322271 Afer_0218 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108860.1 221788 D 525909 CDS YP_003108861.1 256371037 8322272 222273..222773 1 NC_013124.1 KEGG: kra:Krad_0325 response regulator receiver protein; response regulator receiver protein 222773 8322272 Afer_0219 Acidimicrobium ferrooxidans DSM 10331 response regulator receiver protein YP_003108861.1 222273 D 525909 CDS YP_003108862.1 256371038 8322273 222773..224599 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: ank:AnaeK_2521 glycosyl transferase family 2; family 2 glycosyl transferase 224599 8322273 Afer_0220 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003108862.1 222773 D 525909 CDS YP_003108863.1 256371039 8322274 complement(225108..225797) 1 NC_013124.1 PFAM: peptidase S51 dipeptidase E; KEGG: cbe:Cbei_0392 cyanophycinase; peptidase S51 dipeptidase E 225797 8322274 Afer_0221 Acidimicrobium ferrooxidans DSM 10331 peptidase S51 dipeptidase E YP_003108863.1 225108 R 525909 CDS YP_003108864.1 256371040 8322275 225888..226757 1 NC_013124.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: fre:Franean1_1037 3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 226757 8322275 Afer_0222 Acidimicrobium ferrooxidans DSM 10331 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_003108864.1 225888 D 525909 CDS YP_003108865.1 256371041 8322276 226754..228697 1 NC_013124.1 KEGG: saq:Sare_4003 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12- binding domain protein; methylmalonyl-CoA mutase, large subunit 228697 8322276 Afer_0223 Acidimicrobium ferrooxidans DSM 10331 methylmalonyl-CoA mutase, large subunit YP_003108865.1 226754 D 525909 CDS YP_003108866.1 256371042 8322277 228734..229483 1 NC_013124.1 KEGG: xca:xccb100_3008 sensor protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 229483 8322277 Afer_0224 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase YP_003108866.1 228734 D 525909 CDS YP_003108867.1 256371043 8322278 229554..230066 1 NC_013124.1 PFAM: shikimate kinase; KEGG: tfu:Tfu_1091 shikimate kinase; Shikimate kinase 230066 8322278 Afer_0225 Acidimicrobium ferrooxidans DSM 10331 Shikimate kinase YP_003108867.1 229554 D 525909 CDS YP_003108868.1 256371044 8322279 complement(230035..230463) 1 NC_013124.1 PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; KEGG: ace:Acel_2066 vitamin K epoxide reductase; Vitamin K epoxide reductase 230463 8322279 Afer_0226 Acidimicrobium ferrooxidans DSM 10331 Vitamin K epoxide reductase YP_003108868.1 230035 R 525909 CDS YP_003108869.1 256371045 8322280 complement(230481..231332) 1 NC_013124.1 PFAM: protein of unknown function DUF929; KEGG: ace:Acel_2067 hypothetical protein; hypothetical protein 231332 8322280 Afer_0227 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108869.1 230481 R 525909 CDS YP_003108870.1 256371046 8322281 231475..231933 1 NC_013124.1 PFAM: Endoribonuclease L-PSP; KEGG: dau:Daud_1470 endoribonuclease L-PSP; Endoribonuclease L-PSP 231933 8322281 Afer_0228 Acidimicrobium ferrooxidans DSM 10331 Endoribonuclease L-PSP YP_003108870.1 231475 D 525909 CDS YP_003108871.1 256371047 8322282 complement(231930..232835) 1 NC_013124.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sma:SAV_7066 integral membrane protein; hypothetical protein 232835 8322282 Afer_0229 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108871.1 231930 R 525909 CDS YP_003108872.1 256371048 8322283 232925..233539 1 NC_013124.1 PFAM: BioY protein; KEGG: saq:Sare_4638 BioY protein; BioY protein 233539 8322283 Afer_0230 Acidimicrobium ferrooxidans DSM 10331 BioY protein YP_003108872.1 232925 D 525909 CDS YP_003108873.1 256371049 8322284 233536..235092 1 NC_013124.1 PFAM: carboxyl transferase; KEGG: rca:Rcas_4102 carboxyl transferase; carboxyl transferase 235092 8322284 Afer_0231 Acidimicrobium ferrooxidans DSM 10331 carboxyl transferase YP_003108873.1 233536 D 525909 CDS YP_003108874.1 256371050 8322285 235305..236723 1 NC_013124.1 PFAM: Amidase; KEGG: mxa:MXAN_6372 6-aminohexanoate-cyclic-dimer hydrolase; Amidase 236723 8322285 Afer_0232 Acidimicrobium ferrooxidans DSM 10331 Amidase YP_003108874.1 235305 D 525909 CDS YP_003108875.1 256371051 8322286 236735..238144 1 NC_013124.1 PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: mxa:MXAN_0543 peptidase, M20 (glutamate carboxypeptidase) family; peptidase M20 238144 8322286 Afer_0233 Acidimicrobium ferrooxidans DSM 10331 peptidase M20 YP_003108875.1 236735 D 525909 CDS YP_003108876.1 256371052 8322287 complement(238129..239235) 1 NC_013124.1 PFAM: protein of unknown function DUF59; KEGG: nca:Noca_2935 hypothetical protein; hypothetical protein 239235 8322287 Afer_0234 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108876.1 238129 R 525909 CDS YP_003108877.1 256371053 8322288 complement(239232..240014) 1 NC_013124.1 PFAM: NUDIX hydrolase; KEGG: maq:Maqu_3801 beta-lactamase domain- containing protein; NUDIX hydrolase 240014 8322288 Afer_0235 Acidimicrobium ferrooxidans DSM 10331 NUDIX hydrolase YP_003108877.1 239232 R 525909 CDS YP_003108878.1 256371054 8322290 complement(240137..240607) 1 NC_013124.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bur:Bcep18194_B3050 two component transcriptional regulator; response regulator receiver protein 240607 8322290 Afer_0236 Acidimicrobium ferrooxidans DSM 10331 response regulator receiver protein YP_003108878.1 240137 R 525909 CDS YP_003108879.1 256371055 8322291 complement(240620..241681) 1 NC_013124.1 PFAM: Anion-transporting ATPase; KEGG: rha:RHA1_ro04317 arsenate (2+)-transporting ATPase; Anion-transporting ATPase 241681 8322291 Afer_0237 Acidimicrobium ferrooxidans DSM 10331 Anion-transporting ATPase YP_003108879.1 240620 R 525909 CDS YP_003108880.1 256371056 8322292 complement(241678..242529) 1 NC_013124.1 PFAM: Anion-transporting ATPase; KEGG: ank:AnaeK_0988 chromosome partitioning-like ATPase; Anion-transporting ATPase 242529 8322292 Afer_0238 Acidimicrobium ferrooxidans DSM 10331 Anion-transporting ATPase YP_003108880.1 241678 R 525909 CDS YP_003108881.1 256371057 8322293 243093..243365 1 NC_013124.1 PFAM: transcription factor WhiB; KEGG: fal:FRAAL1135 WhiB family cell cycle control transcriptional regulator; transcription factor WhiB 243365 8322293 Afer_0239 Acidimicrobium ferrooxidans DSM 10331 transcription factor WhiB YP_003108881.1 243093 D 525909 CDS YP_003108882.1 256371058 8322294 243450..243812 1 NC_013124.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: cja:CJA_0888 HesB/YadR/YfhF family protein; iron-sulfur cluster assembly accessory protein 243812 8322294 Afer_0240 Acidimicrobium ferrooxidans DSM 10331 iron-sulfur cluster assembly accessory protein YP_003108882.1 243450 D 525909 CDS YP_003108883.1 256371059 8322295 complement(244047..244700) 1 NC_013124.1 PFAM: transcriptional regulator domain protein; KEGG: sma:SAV_4042 two-component system response regulator; winged helix family two component transcriptional regulator 244700 8322295 Afer_0241 Acidimicrobium ferrooxidans DSM 10331 winged helix family two component transcriptional regulator YP_003108883.1 244047 R 525909 CDS YP_003108884.1 256371060 8322296 complement(244702..246045) 1 NC_013124.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sat:SYN_01628 glutamine synthetase; glutamine synthetase catalytic subunit 246045 8322296 Afer_0242 Acidimicrobium ferrooxidans DSM 10331 glutamine synthetase catalytic subunit YP_003108884.1 244702 R 525909 CDS YP_003108885.1 256371061 8322297 246195..247622 1 NC_013124.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: fre:Franean1_1770 glutamine synthetase, type I; glutamine synthetase, type I 247622 8322297 Afer_0243 Acidimicrobium ferrooxidans DSM 10331 glutamine synthetase, type I YP_003108885.1 246195 D 525909 CDS YP_003108886.1 256371062 8322298 complement(247758..248327) 1 NC_013124.1 KEGG: kra:Krad_4317 hypothetical protein; hypothetical protein 248327 8322298 Afer_0244 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108886.1 247758 R 525909 CDS YP_003108887.1 256371063 8322299 complement(248321..249601) 1 NC_013124.1 KEGG: bwe:BcerKBAB4_1354 peptidase M23B; hypothetical protein 249601 8322299 Afer_0245 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108887.1 248321 R 525909 CDS YP_003108888.1 256371064 8322300 249903..251618 1 NC_013124.1 KEGG: rxy:Rxyl_2763 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 251618 8322300 Afer_0246 Acidimicrobium ferrooxidans DSM 10331 NAD+ synthetase YP_003108888.1 249903 D 525909 CDS YP_003108889.1 256371065 8322301 251615..252133 1 NC_013124.1 hypothetical protein 252133 8322301 Afer_0247 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108889.1 251615 D 525909 CDS YP_003108890.1 256371066 8322302 252139..253152 1 NC_013124.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: fra:Francci3_1283 sigma 38; RpoD subfamily RNA polymerase sigma-70 subunit 253152 8322302 Afer_0248 Acidimicrobium ferrooxidans DSM 10331 RpoD subfamily RNA polymerase sigma-70 subunit YP_003108890.1 252139 D 525909 CDS YP_003108891.1 256371067 8322303 253783..255015 1 NC_013124.1 KEGG: mxa:MXAN_2655 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; Shikimate/quinate 5- dehydrogenase; glutamyl-tRNA reductase 255015 8322303 Afer_0249 Acidimicrobium ferrooxidans DSM 10331 glutamyl-tRNA reductase YP_003108891.1 253783 D 525909 CDS YP_003108892.1 256371068 8322304 255015..255890 1 NC_013124.1 KEGG: ace:Acel_0237 hydroxymethylbilane synthase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 255890 8322304 Afer_0250 Acidimicrobium ferrooxidans DSM 10331 porphobilinogen deaminase YP_003108892.1 255015 D 525909 CDS YP_003108893.1 256371069 8322305 255890..257362 1 NC_013124.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: sus:Acid_3181 uroporphyrinogen-III C- methyltransferase / uroporphyrinogen-III synthase; uroporphyrin-III C-methyltransferase 257362 8322305 Afer_0251 Acidimicrobium ferrooxidans DSM 10331 uroporphyrin-III C-methyltransferase YP_003108893.1 255890 D 525909 CDS YP_003108894.1 256371070 8322306 257373..258350 1 NC_013124.1 PFAM: delta-aminolevulinic acid dehydratase; KEGG: krh:KRH_08550 delta-aminolevulinic acid dehydratase; Porphobilinogen synthase 258350 8322306 Afer_0252 Acidimicrobium ferrooxidans DSM 10331 Porphobilinogen synthase YP_003108894.1 257373 D 525909 CDS YP_003108895.1 256371071 8322307 258338..259630 1 NC_013124.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: dol:Dole_1545 glutamate-1-semialdehyde-2,1- aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 259630 8322307 Afer_0253 Acidimicrobium ferrooxidans DSM 10331 glutamate-1-semialdehyde-2,1-aminomutase YP_003108895.1 258338 D 525909 CDS YP_003108896.1 256371072 8322308 complement(259662..261050) 1 NC_013124.1 PFAM: Chloride channel core; KEGG: bvi:Bcep1808_4875 Cl-channel, voltage-gated family protein; Chloride channel core 261050 8322308 Afer_0254 Acidimicrobium ferrooxidans DSM 10331 Chloride channel core YP_003108896.1 259662 R 525909 CDS YP_003108897.1 256371073 8322309 complement(261313..262206) 1 NC_013124.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swd:Swoo_4886 naphthoate synthase; naphthoate synthase 262206 8322309 Afer_0255 Acidimicrobium ferrooxidans DSM 10331 naphthoate synthase YP_003108897.1 261313 R 525909 CDS YP_003108898.1 256371074 8322310 262397..263275 1 NC_013124.1 PFAM: metallophosphoesterase; KEGG: pzu:PHZ_c0307 3',5'-cyclic-nucleotide phosphodiesterase; metallophosphoesterase 263275 8322310 Afer_0256 Acidimicrobium ferrooxidans DSM 10331 metallophosphoesterase YP_003108898.1 262397 D 525909 CDS YP_003108899.1 256371075 8322311 263394..264182 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; KEGG: sru:SRU_2037 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 264182 8322311 Afer_0257 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003108899.1 263394 D 525909 CDS YP_003108900.1 256371076 8322312 complement(264161..264883) 1 NC_013124.1 KEGG: cef:CE1107 hypothetical protein; hypothetical protein 264883 8322312 Afer_0258 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108900.1 264161 R 525909 CDS YP_003108901.1 256371077 8322313 complement(264844..265347) 1 NC_013124.1 KEGG: kra:Krad_1834 hypothetical protein; hypothetical protein 265347 8322313 Afer_0259 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108901.1 264844 R 525909 CDS YP_003108902.1 256371078 8322314 complement(265344..265967) 1 NC_013124.1 PFAM: Phosphoglycerate mutase; KEGG: cgt:cgR_1141 hypothetical protein; phosphoglycerate mutase 265967 8322314 Afer_0260 Acidimicrobium ferrooxidans DSM 10331 phosphoglycerate mutase YP_003108902.1 265344 R 525909 CDS YP_003108903.1 256371079 8322315 complement(266046..267218) 1 NC_013124.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: tfu:Tfu_0436 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 267218 8322315 Afer_0261 Acidimicrobium ferrooxidans DSM 10331 acetyl-CoA acetyltransferase YP_003108903.1 266046 R 525909 CDS YP_003108904.1 256371080 8322316 complement(267215..267718) 1 NC_013124.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: saq:Sare_1005 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 267718 8322316 Afer_0262 Acidimicrobium ferrooxidans DSM 10331 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_003108904.1 267215 R 525909 CDS YP_003108905.1 256371081 8322317 267792..268178 1 NC_013124.1 hypothetical protein 268178 8322317 Afer_0263 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108905.1 267792 D 525909 CDS YP_003108906.1 256371082 8322318 268205..268927 1 NC_013124.1 PFAM: LmbE family protein; KEGG: ace:Acel_0374 LmbE family protein; LmbE family protein 268927 8322318 Afer_0264 Acidimicrobium ferrooxidans DSM 10331 LmbE family protein YP_003108906.1 268205 D 525909 CDS YP_003108907.1 256371083 8322319 269215..270252 1 NC_013124.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sma:SAV_6448 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 270252 8322319 Afer_0265 Acidimicrobium ferrooxidans DSM 10331 alcohol dehydrogenase GroES domain-containing protein YP_003108907.1 269215 D 525909 CDS YP_003108908.1 256371084 8322320 270316..271350 1 NC_013124.1 PFAM: aldo/keto reductase; KEGG: fre:Franean1_4232 aldo/keto reductase; aldo/keto reductase 271350 8322320 Afer_0266 Acidimicrobium ferrooxidans DSM 10331 aldo/keto reductase YP_003108908.1 270316 D 525909 CDS YP_003108909.1 256371085 8322321 complement(271559..272221) 1 NC_013124.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sen:SACE_4714 6-O-methylguanine DNA methyltransferase; type 11 methyltransferase 272221 8322321 Afer_0267 Acidimicrobium ferrooxidans DSM 10331 type 11 methyltransferase YP_003108909.1 271559 R 525909 CDS YP_003108910.1 256371086 8322322 272437..272880 1 NC_013124.1 hypothetical protein 272880 8322322 Afer_0268 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108910.1 272437 D 525909 CDS YP_003108911.1 256371087 8322323 272964..273959 1 NC_013124.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rxy:Rxyl_0463 pyridoxal-5'-phosphate- dependent enzyme, beta subunit; Pyridoxal-5'-phosphate-dependent protein beta subunit 273959 8322323 Afer_0269 Acidimicrobium ferrooxidans DSM 10331 Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003108911.1 272964 D 525909 CDS YP_003108912.1 256371088 8322324 complement(273928..275808) 1 NC_013124.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: hau:Haur_0337 ABC transporter related; ABC transporter-like protein 275808 8322324 Afer_0270 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003108912.1 273928 R 525909 CDS YP_003108913.1 256371089 8322325 275883..276584 1 NC_013124.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: fal:FRAAL4424 reductase; cob(II)yrinic acid a,c-diamide reductase 276584 8322325 Afer_0271 Acidimicrobium ferrooxidans DSM 10331 cob(II)yrinic acid a,c-diamide reductase YP_003108913.1 275883 D 525909 CDS YP_003108914.1 256371090 8322326 complement(276607..281163) 1 NC_013124.1 PFAM: NAD-glutamate dehydrogenase; KEGG: ace:Acel_1749 glutamate dehydrogenase (NAD); NAD-glutamate dehydrogenase 281163 8322326 Afer_0272 Acidimicrobium ferrooxidans DSM 10331 NAD-glutamate dehydrogenase YP_003108914.1 276607 R 525909 CDS YP_003108915.1 256371091 8322327 complement(281358..282311) 1 NC_013124.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: nca:Noca_3382 agmatinase; agmatinase 282311 8322327 Afer_0273 Acidimicrobium ferrooxidans DSM 10331 agmatinase YP_003108915.1 281358 R 525909 CDS YP_003108916.1 256371092 8322328 282415..283032 1 NC_013124.1 PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: art:Arth_0847 XRE family transcriptional regulator with cupin sensor; XRE family transcriptional regulator 283032 8322328 Afer_0274 Acidimicrobium ferrooxidans DSM 10331 XRE family transcriptional regulator YP_003108916.1 282415 D 525909 CDS YP_003108917.1 256371093 8322329 283067..283417 1 NC_013124.1 hypothetical protein 283417 8322329 Afer_0275 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108917.1 283067 D 525909 CDS YP_003108918.1 256371094 8322330 283417..284100 1 NC_013124.1 PFAM: protein of unknown function DUF1614; KEGG: bbt:BBta_0662 hypothetical protein; hypothetical protein 284100 8322330 Afer_0276 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108918.1 283417 D 525909 CDS YP_003108919.1 256371095 8322331 complement(284224..285093) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_5060 integrase catalytic subunit; integrase catalytic subunit 285093 8322331 Afer_0277 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003108919.1 284224 R 525909 CDS YP_003108920.1 256371096 8322332 complement(285093..285413) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 285413 8322332 Afer_0278 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003108920.1 285093 R 525909 CDS YP_003108921.1 256371097 8322333 285555..286163 1 NC_013124.1 KEGG: ace:Acel_0517 hypothetical protein; hypothetical protein 286163 8322333 Afer_0279 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108921.1 285555 D 525909 CDS YP_003108922.1 256371098 8322334 286409..289279 1 NC_013124.1 KEGG: spn:SP_1772 cell wall surface anchor family protein; hypothetical protein 289279 8322334 Afer_0280 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108922.1 286409 D 525909 CDS YP_003108923.1 256371099 8322335 289279..289737 1 NC_013124.1 KEGG: pcr:Pcryo_2115 hypothetical protein; hypothetical protein 289737 8322335 Afer_0281 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108923.1 289279 D 525909 CDS YP_003108924.1 256371100 8322336 290076..290981 1 NC_013124.1 KEGG: rha:RHA1_ro01864 mycothiol-dependent maleylpyruvate isomerase; hypothetical protein 290981 8322336 Afer_0282 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108924.1 290076 D 525909 CDS YP_003108925.1 256371101 8322337 291194..291706 1 NC_013124.1 KEGG: mab:MAB_2457c hypothetical protein; hypothetical protein 291706 8322337 Afer_0283 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108925.1 291194 D 525909 CDS YP_003108926.1 256371102 8322339 complement(291949..294183) 1 NC_013124.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: sus:Acid_4391 protein of unknown function DUF893, YccS/YhfK; hypothetical protein 294183 8322339 Afer_0284 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108926.1 291949 R 525909 CDS YP_003108927.1 256371103 8322340 complement(294180..294821) 1 NC_013124.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: rha:RHA1_ro02330 methylated-DNA--[protein]- cysteine S-methyltransferase; methylated-DNA/protein- cysteinemethyltransferase 294821 8322340 Afer_0285 Acidimicrobium ferrooxidans DSM 10331 methylated-DNA/protein- cysteinemethyltransferase YP_003108927.1 294180 R 525909 CDS YP_003108928.1 256371104 8322341 295176..296579 1 NC_013124.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase domain protein; KEGG: pac:PPA1787 ATP-dependent RNA helicase; DEAD/DEAH box helicase domain-containing protein 296579 8322341 Afer_0286 Acidimicrobium ferrooxidans DSM 10331 DEAD/DEAH box helicase domain-containing protein YP_003108928.1 295176 D 525909 CDS YP_003108929.1 256371105 8322342 complement(296576..297271) 1 NC_013124.1 PFAM: Negative transcriptional regulator; KEGG: sen:SACE_2130 hypothetical protein; FMN-binding negative transcriptional regulator 297271 8322342 Afer_0287 Acidimicrobium ferrooxidans DSM 10331 FMN-binding negative transcriptional regulator YP_003108929.1 296576 R 525909 CDS YP_003108930.1 256371106 8322343 297468..298355 1 NC_013124.1 KEGG: hypothetical protein; hypothetical protein 298355 8322343 Afer_0288 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108930.1 297468 D 525909 CDS YP_003108931.1 256371107 8322344 298440..299213 1 NC_013124.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 299213 8322344 Afer_0289 Acidimicrobium ferrooxidans DSM 10331 enoyl-CoA hydratase YP_003108931.1 298440 D 525909 CDS YP_003108932.1 256371108 8322345 complement(299207..299686) 1 NC_013124.1 PFAM: UspA domain protein; KEGG: sen:SACE_3386 universal stress protein; UspA domain-containing protein 299686 8322345 Afer_0290 Acidimicrobium ferrooxidans DSM 10331 UspA domain-containing protein YP_003108932.1 299207 R 525909 CDS YP_003108933.1 256371109 8322346 complement(299691..302129) 1 NC_013124.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; KEGG: afe:Lferr_2687 ATPase, P-type (transporting), HAD superfamily, subfamily IC; P-type HAD superfamily ATPase 302129 8322346 Afer_0291 Acidimicrobium ferrooxidans DSM 10331 P-type HAD superfamily ATPase YP_003108933.1 299691 R 525909 CDS YP_003108934.1 256371110 8322347 complement(302140..303051) 1 NC_013124.1 PFAM: UspA domain protein; KEGG: fal:FRAAL4243 stress-inducible protein; UspA domain-containing protein 303051 8322347 Afer_0292 Acidimicrobium ferrooxidans DSM 10331 UspA domain-containing protein YP_003108934.1 302140 R 525909 CDS YP_003108935.1 256371111 8322348 complement(303159..304547) 1 NC_013124.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 304547 8322348 Afer_0293 Acidimicrobium ferrooxidans DSM 10331 dihydrolipoamide dehydrogenase YP_003108935.1 303159 R 525909 CDS YP_003108936.1 256371112 8322349 304760..305272 1 NC_013124.1 PFAM: ferric-uptake regulator; KEGG: nfa:nfa3250 ferric uptake regulator; Fur family ferric uptake regulator 305272 8322349 Afer_0294 Acidimicrobium ferrooxidans DSM 10331 Fur family ferric uptake regulator YP_003108936.1 304760 D 525909 CDS YP_003108937.1 256371113 8322350 305260..307449 1 NC_013124.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: rha:RHA1_ro05275 catalase; catalase/peroxidase HPI 307449 8322350 Afer_0295 Acidimicrobium ferrooxidans DSM 10331 catalase/peroxidase HPI YP_003108937.1 305260 D 525909 CDS YP_003108938.1 256371114 8322351 complement(307584..308456) 1 NC_013124.1 PFAM: protein of unknown function DUF74; KEGG: afe:Lferr_1683 hypothetical protein; hypothetical protein 308456 8322351 Afer_0296 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108938.1 307584 R 525909 CDS YP_003108939.1 256371115 8322352 308548..309819 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: sma:SAV_3894 integral membrane efflux protein; major facilitator superfamily protein 309819 8322352 Afer_0297 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003108939.1 308548 D 525909 CDS YP_003108940.1 256371116 8322353 complement(309951..311264) 1 NC_013124.1 PFAM: NLP/P60 protein; KEGG: sgr:SGR_2734 NLP/P60 family secreted protein; NLP/P60 protein 311264 8322353 Afer_0298 Acidimicrobium ferrooxidans DSM 10331 NLP/P60 protein YP_003108940.1 309951 R 525909 CDS YP_003108941.1 256371117 8322354 311574..312389 1 NC_013124.1 KEGG: cyt:cce_4767 hypothetical protein; hypothetical protein 312389 8322354 Afer_0299 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108941.1 311574 D 525909 CDS YP_003108942.1 256371118 8322355 complement(312386..313198) 1 NC_013124.1 PFAM: ABC-2 type transporter; KEGG: mta:Moth_2298 daunorubicin resistance ABC transporter membrane protein; ABC-2 type transporter 313198 8322355 Afer_0300 Acidimicrobium ferrooxidans DSM 10331 ABC-2 type transporter YP_003108942.1 312386 R 525909 CDS YP_003108943.1 256371119 8322356 complement(313217..314095) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: amr:AM1_A0193 integrase, catalytic region; integrase catalytic subunit 314095 8322356 Afer_0301 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003108943.1 313217 R 525909 CDS YP_003108944.1 256371120 8322357 complement(314092..314421) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 314421 8322357 Afer_0302 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003108944.1 314092 R 525909 CDS YP_003108945.1 256371121 8322358 complement(314418..314546) 1 NC_013124.1 hypothetical protein 314546 8322358 Afer_0303 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108945.1 314418 R 525909 CDS YP_003108946.1 256371122 8322360 complement(315670..316884) 1 NC_013124.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: saq:Sare_0142 acyl-CoA dehydrogenase domain- containing protein; acyl-CoA dehydrogenase domain-containing protein 316884 8322360 Afer_0305 Acidimicrobium ferrooxidans DSM 10331 acyl-CoA dehydrogenase domain-containing protein YP_003108946.1 315670 R 525909 CDS YP_003108947.1 256371123 8322361 complement(316961..318301) 1 NC_013124.1 KEGG: hha:Hhal_0107 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; cysteinyl-tRNA synthetase 318301 8322361 Afer_0306 Acidimicrobium ferrooxidans DSM 10331 cysteinyl-tRNA synthetase YP_003108947.1 316961 R 525909 CDS YP_003108948.1 256371124 8322362 318455..321022 1 NC_013124.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 321022 valS 8322362 valS Acidimicrobium ferrooxidans DSM 10331 valyl-tRNA synthetase YP_003108948.1 318455 D 525909 CDS YP_003108949.1 256371125 8322363 321048..322394 1 NC_013124.1 KEGG: mav:MAV_4571 metal ion transporter, nramp family protein; metal ion transporter, nramp family protein 322394 8322363 Afer_0308 Acidimicrobium ferrooxidans DSM 10331 metal ion transporter, nramp family protein YP_003108949.1 321048 D 525909 CDS YP_003108950.1 256371126 8322364 complement(322410..322790) 1 NC_013124.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: tpe:Tpen_0466 regulatory protein, ArsR; ArsR family transcriptional regulator 322790 8322364 Afer_0309 Acidimicrobium ferrooxidans DSM 10331 ArsR family transcriptional regulator YP_003108950.1 322410 R 525909 CDS YP_003108951.1 256371127 8322365 complement(322801..324747) 1 NC_013124.1 SMART: von Willebrand factor A; KEGG: kra:Krad_1094 von Willebrand factor A; von Willebrand factor A 324747 8322365 Afer_0310 Acidimicrobium ferrooxidans DSM 10331 von Willebrand factor A YP_003108951.1 322801 R 525909 CDS YP_003108952.1 256371128 8322366 complement(324751..326133) 1 NC_013124.1 KEGG: fra:Francci3_3905 magnesium chelatase, ChlI subunit; magnesium chelatase, ChlI subunit 326133 8322366 Afer_0311 Acidimicrobium ferrooxidans DSM 10331 magnesium chelatase, ChlI subunit YP_003108952.1 324751 R 525909 CDS YP_003108953.1 256371129 8322367 326198..327955 1 NC_013124.1 KEGG: sgr:SGR_2689 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; succinate dehydrogenase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; succinate dehydrogenase or fumarate reductase, flavoprotein subunit 327955 8322367 Afer_0312 Acidimicrobium ferrooxidans DSM 10331 succinate dehydrogenase or fumarate reductase, flavoprotein subunit YP_003108953.1 326198 D 525909 CDS YP_003108954.1 256371130 8322368 327955..328701 1 NC_013124.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: fal:FRAAL1187 succinate dehydrogenase iron- sulfur subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein 328701 8322368 Afer_0313 Acidimicrobium ferrooxidans DSM 10331 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003108954.1 327955 D 525909 CDS YP_003108955.1 256371131 8322369 328676..328951 1 NC_013124.1 hypothetical protein 328951 8322369 Afer_0314 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108955.1 328676 D 525909 CDS YP_003108956.1 256371132 8322370 328955..329557 1 NC_013124.1 KEGG: mva:Mvan_0765 hypothetical protein; hypothetical protein 329557 8322370 Afer_0315 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108956.1 328955 D 525909 CDS YP_003108957.1 256371133 8322371 329629..329844 1 NC_013124.1 hypothetical protein 329844 8322371 Afer_0316 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108957.1 329629 D 525909 CDS YP_003108958.1 256371134 8322372 329951..330334 1 NC_013124.1 PFAM: transcription factor WhiB; KEGG: ace:Acel_0457 transcription factor WhiB; transcription factor WhiB 330334 8322372 Afer_0317 Acidimicrobium ferrooxidans DSM 10331 transcription factor WhiB YP_003108958.1 329951 D 525909 CDS YP_003108959.1 256371135 8322373 330385..330873 1 NC_013124.1 PFAM: cobalamin B12-binding domain protein; KEGG: sgr:SGR_2730 isobutyryl-CoA mutase, chain B; cobalamin B12-binding domain-containing protein 330873 8322373 Afer_0318 Acidimicrobium ferrooxidans DSM 10331 cobalamin B12-binding domain-containing protein YP_003108959.1 330385 D 525909 CDS YP_003108960.1 256371136 8322374 330876..332024 1 NC_013124.1 KEGG: rxy:Rxyl_1276 succinyl-CoA synthetase (ADP- forming) beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit beta 332024 8322374 Afer_0319 Acidimicrobium ferrooxidans DSM 10331 succinyl-CoA synthetase subunit beta YP_003108960.1 330876 D 525909 CDS YP_003108961.1 256371137 8322375 332021..332908 1 NC_013124.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA- binding domain protein; KEGG: afw:Anae109_3723 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 332908 8322375 Afer_0320 Acidimicrobium ferrooxidans DSM 10331 succinyl-CoA synthetase subunit alpha YP_003108961.1 332021 D 525909 CDS YP_003108962.1 256371138 8322376 332934..333572 1 NC_013124.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: LOC100083317; similar to glycinamide ribonucleotide formyltransferase ; K01945 phosphoribosylamine--glycine ligase; phosphoribosylglycinamide formyltransferase 333572 8322376 Afer_0321 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylglycinamide formyltransferase YP_003108962.1 332934 D 525909 CDS YP_003108963.1 256371139 8322377 333557..335050 1 NC_013124.1 KEGG: kra:Krad_3995 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region; IMP cyclohydrolase 335050 8322377 Afer_0322 Acidimicrobium ferrooxidans DSM 10331 IMP cyclohydrolase YP_003108963.1 333557 D 525909 CDS YP_003108964.1 256371140 8322378 335059..335928 1 NC_013124.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: tfu:Tfu_2571 methenyltetrahydrofolate cyclohydrolase; methenyltetrahydrofolate cyclohydrolase 335928 8322378 Afer_0323 Acidimicrobium ferrooxidans DSM 10331 methenyltetrahydrofolate cyclohydrolase YP_003108964.1 335059 D 525909 CDS YP_003108965.1 256371141 8322379 335925..336779 1 NC_013124.1 PFAM: methylenetetrahydrofolate reductase; KEGG: ttj:TTHA0327 5,10-methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase (NAD(P)H) 336779 8322379 Afer_0324 Acidimicrobium ferrooxidans DSM 10331 methylenetetrahydrofolate reductase (NAD(P)H) YP_003108965.1 335925 D 525909 CDS YP_003108966.1 256371142 8322380 336915..338348 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: acr:Acry_3608 general substrate transporter; major facilitator superfamily protein 338348 8322380 Afer_0325 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003108966.1 336915 D 525909 CDS YP_003108967.1 256371143 8322381 338748..339341 1 NC_013124.1 KEGG: nph:NP0440A homolog 3 to rad50 ATPase; hypothetical protein 339341 8322381 Afer_0326 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108967.1 338748 D 525909 CDS YP_003108968.1 256371144 8322382 complement(339515..339775) 1 NC_013124.1 hypothetical protein 339775 8322382 Afer_0327 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108968.1 339515 R 525909 CDS YP_003108969.1 256371145 8322383 339913..340206 1 NC_013124.1 PFAM: transcription factor WhiB; KEGG: bad:BAD_0659 WhiB-type transcription regulator; transcription factor WhiB 340206 8322383 Afer_0328 Acidimicrobium ferrooxidans DSM 10331 transcription factor WhiB YP_003108969.1 339913 D 525909 CDS YP_003108970.1 256371146 8322384 340216..341022 1 NC_013124.1 PFAM: Formiminotransferase domain protein; KEGG: sat:SYN_00461 glutamate formiminotransferase; Formiminotransferase domain-containing protein 341022 8322384 Afer_0329 Acidimicrobium ferrooxidans DSM 10331 Formiminotransferase domain-containing protein YP_003108970.1 340216 D 525909 CDS YP_003108971.1 256371147 8322385 complement(340976..341677) 1 NC_013124.1 PFAM: regulatory protein TetR; KEGG: rsa:RSal33209_1214 TetR family transcriptional regulator; TetR family transcriptional regulator 341677 8322385 Afer_0330 Acidimicrobium ferrooxidans DSM 10331 TetR family transcriptional regulator YP_003108971.1 340976 R 525909 CDS YP_003108972.1 256371148 8322386 341830..342798 1 NC_013124.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_3928 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 342798 8322386 Afer_0331 Acidimicrobium ferrooxidans DSM 10331 GDP-mannose 4,6-dehydratase YP_003108972.1 341830 D 525909 CDS YP_003108973.1 256371149 8322387 342804..343457 1 NC_013124.1 KEGG: nca:Noca_1952 ABC transporter related; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 343457 8322387 Afer_0332 Acidimicrobium ferrooxidans DSM 10331 heme exporter protein CcmA YP_003108973.1 342804 D 525909 CDS YP_003108974.1 256371150 8322388 343451..344116 1 NC_013124.1 PFAM: cytochrome c-type biogenesis protein CcmB; ABC-2 type transporter; KEGG: nca:Noca_1953 cytochrome c-type biogenesis protein CcmB; cytochrome c-type biogenesis protein CcmB 344116 8322388 Afer_0333 Acidimicrobium ferrooxidans DSM 10331 cytochrome c-type biogenesis protein CcmB YP_003108974.1 343451 D 525909 CDS YP_003108975.1 256371151 8322389 344120..344854 1 NC_013124.1 PFAM: cytochrome c assembly protein; KEGG: nca:Noca_1955 cytochrome c assembly protein; cytochrome c assembly protein 344854 8322389 Afer_0334 Acidimicrobium ferrooxidans DSM 10331 cytochrome c assembly protein YP_003108975.1 344120 D 525909 CDS YP_003108976.1 256371152 8322390 344851..344988 1 NC_013124.1 hypothetical protein 344988 8322390 Afer_0335 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108976.1 344851 D 525909 CDS YP_003108977.1 256371153 8322391 344981..345469 1 NC_013124.1 KEGG: cak:Caul_3892 CcmE/CycJ protein; CcmE/CycJ protein 345469 8322391 Afer_0336 Acidimicrobium ferrooxidans DSM 10331 CcmE/CycJ protein YP_003108977.1 344981 D 525909 CDS YP_003108978.1 256371154 8322392 345466..347448 1 NC_013124.1 PFAM: cytochrome c assembly protein; KEGG: nca:Noca_1958 cytochrome c assembly protein; cytochrome c assembly protein 347448 8322392 Afer_0337 Acidimicrobium ferrooxidans DSM 10331 cytochrome c assembly protein YP_003108978.1 345466 D 525909 CDS YP_003108979.1 256371155 8322393 347441..347983 1 NC_013124.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mgm:Mmc1_3503 periplasmic protein thiol-- disulphide oxidoreductase DsbE; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 347983 8322393 Afer_0338 Acidimicrobium ferrooxidans DSM 10331 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_003108979.1 347441 D 525909 CDS YP_003108980.1 256371156 8322394 347980..349065 1 NC_013124.1 PFAM: cytochrome C biogenesis protein; KEGG: eba:ebA3525 cytochrome c biogenesis protein; cytochrome C biogenesis protein 349065 8322394 Afer_0339 Acidimicrobium ferrooxidans DSM 10331 cytochrome C biogenesis protein YP_003108980.1 347980 D 525909 CDS YP_003108981.1 256371157 8322395 349190..349807 1 NC_013124.1 PFAM: oxidoreductase molybdopterin binding; KEGG: rca:Rcas_2793 oxidoreductase molybdopterin binding; molybdopterin binding oxidoreductase 349807 8322395 Afer_0340 Acidimicrobium ferrooxidans DSM 10331 molybdopterin binding oxidoreductase YP_003108981.1 349190 D 525909 CDS YP_003108982.1 256371158 8322396 349948..351474 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: afe:Lferr_1484 major facilitator superfamily MFS_1; major facilitator superfamily protein 351474 8322396 Afer_0341 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003108982.1 349948 D 525909 CDS YP_003108983.1 256371159 8322397 complement(351648..352238) 1 NC_013124.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: sco:SCO4072 LuxR family two component system response regulator; LuxR family two component transcriptional regulator 352238 8322397 Afer_0342 Acidimicrobium ferrooxidans DSM 10331 LuxR family two component transcriptional regulator YP_003108983.1 351648 R 525909 CDS YP_003108984.1 256371160 8322398 complement(352229..353302) 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO2307 two-component sensor kinase; signal transduction histidine kinase 353302 8322398 Afer_0343 Acidimicrobium ferrooxidans DSM 10331 signal transduction histidine kinase YP_003108984.1 352229 R 525909 CDS YP_003108985.1 256371161 8322399 complement(353299..354084) 1 NC_013124.1 PFAM: ABC-2 type transporter; KEGG: dra:DR_A0008 hypothetical protein; ABC-2 type transporter 354084 8322399 Afer_0344 Acidimicrobium ferrooxidans DSM 10331 ABC-2 type transporter YP_003108985.1 353299 R 525909 CDS YP_003108986.1 256371162 8322400 complement(354081..354989) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2305 ABC transporter ATP-binding subunit; ABC transporter-like protein 354989 8322400 Afer_0345 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003108986.1 354081 R 525909 CDS YP_003108987.1 256371163 8322401 complement(355580..356317) 1 NC_013124.1 KEGG: saq:Sare_3145 transcriptional regulator, TrmB; transcriptional regulator 356317 8322401 Afer_0346 Acidimicrobium ferrooxidans DSM 10331 transcriptional regulator YP_003108987.1 355580 R 525909 CDS YP_003108988.1 256371164 8322402 356412..357521 1 NC_013124.1 PFAM: protein of unknown function DUF59; KEGG: sgr:SGR_2373 ATP-binding protein; hypothetical protein 357521 8322402 Afer_0347 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108988.1 356412 D 525909 CDS YP_003108989.1 256371165 8322403 357560..357793 1 NC_013124.1 KEGG: lxx:Lxx09210 hypothetical protein; hypothetical protein 357793 8322403 Afer_0348 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108989.1 357560 D 525909 CDS YP_003108990.1 256371166 8322404 357806..358726 1 NC_013124.1 KEGG: ade:Adeh_0929 chromosome partitioning-like ATPase; chromosome partitioning-like ATPase 358726 8322404 Afer_0349 Acidimicrobium ferrooxidans DSM 10331 chromosome partitioning-like ATPase YP_003108990.1 357806 D 525909 CDS YP_003108991.1 256371167 8322405 358723..359850 1 NC_013124.1 KEGG: fre:Franean1_0335 anion-transporting ATPase; chromosome partitioning ATPase 359850 8322405 Afer_0350 Acidimicrobium ferrooxidans DSM 10331 chromosome partitioning ATPase YP_003108991.1 358723 D 525909 CDS YP_003108992.1 256371168 8322406 359862..360728 1 NC_013124.1 PFAM: PHP domain protein; KEGG: tpd:Teth39_0146 HisJ family histidinol phosphate phosphatase; PHP domain-containing protein 360728 8322406 Afer_0351 Acidimicrobium ferrooxidans DSM 10331 PHP domain-containing protein YP_003108992.1 359862 D 525909 CDS YP_003108993.1 256371169 8322407 360734..362161 1 NC_013124.1 PFAM: histidine kinase dimerization/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ace:Acel_0559 signal transduction histidine kinase; signal transduction histidine kinase 362161 8322407 Afer_0352 Acidimicrobium ferrooxidans DSM 10331 signal transduction histidine kinase YP_003108993.1 360734 D 525909 CDS YP_003108994.1 256371170 8322408 362240..362995 1 NC_013124.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: sen:SACE_6197 electron transfer flavoprotein, beta subunit; Electron transfer flavoprotein alpha/beta- subunit 362995 8322408 Afer_0353 Acidimicrobium ferrooxidans DSM 10331 Electron transfer flavoprotein alpha/beta- subunit YP_003108994.1 362240 D 525909 CDS YP_003108995.1 256371171 8322409 363006..363974 1 NC_013124.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ace:Acel_0685 electron transfer flavoprotein, alpha subunit; Electron transfer flavoprotein alpha subunit 363974 8322409 Afer_0354 Acidimicrobium ferrooxidans DSM 10331 Electron transfer flavoprotein alpha subunit YP_003108995.1 363006 D 525909 CDS YP_003108996.1 256371172 8322410 complement(364102..364518) 1 NC_013124.1 KEGG: ace:Acel_0566 superoxide dismutase; TIGRFAM: superoxide dismutase, Ni; PFAM: Superoxide dismutase Ni-type; superoxide dismutase, Ni 364518 8322410 Afer_0355 Acidimicrobium ferrooxidans DSM 10331 superoxide dismutase, Ni YP_003108996.1 364102 R 525909 CDS YP_003108997.1 256371173 8322411 complement(365098..365262) 1 NC_013124.1 hypothetical protein 365262 8322411 Afer_0356 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003108997.1 365098 R 525909 CDS YP_003108998.1 256371174 8322412 complement(365286..366110) 1 NC_013124.1 KEGG: sfu:Sfum_0197 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 366110 8322412 Afer_0357 Acidimicrobium ferrooxidans DSM 10331 pyrroline-5-carboxylate reductase YP_003108998.1 365286 R 525909 CDS YP_003108999.1 256371175 8322413 complement(366120..367337) 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: kra:Krad_0890 glycosyl transferase group 1; group 1 glycosyl transferase 367337 8322413 Afer_0358 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003108999.1 366120 R 525909 CDS YP_003109000.1 256371176 8322414 complement(367392..367928) 1 NC_013124.1 KEGG: hypothetical protein; hypothetical protein 367928 8322414 Afer_0359 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109000.1 367392 R 525909 CDS YP_003109001.1 256371177 8322415 complement(367959..370163) 1 NC_013124.1 KEGG: npu:Npun_F1793 amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase 370163 8322415 Afer_0360 Acidimicrobium ferrooxidans DSM 10331 amylo-alpha-1,6-glucosidase YP_003109001.1 367959 R 525909 CDS YP_003109002.1 256371178 8322416 complement(370160..371320) 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: art:Arth_3461 glycosyl transferase, group 1; group 1 glycosyl transferase 371320 8322416 Afer_0361 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003109002.1 370160 R 525909 CDS YP_003109003.1 256371179 8322417 complement(371416..372726) 1 NC_013124.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mkm:Mkms_0784 geranylgeranyl reductase; geranylgeranyl reductase 372726 8322417 Afer_0362 Acidimicrobium ferrooxidans DSM 10331 geranylgeranyl reductase YP_003109003.1 371416 R 525909 CDS YP_003109004.1 256371180 8322418 372882..373340 1 NC_013124.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: gbm:Gbem_3926 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 373340 8322418 Afer_0363 Acidimicrobium ferrooxidans DSM 10331 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_003109004.1 372882 D 525909 CDS YP_003109005.1 256371181 8322419 373342..373884 1 NC_013124.1 KEGG: ace:Acel_0268 NADH dehydrogenase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 373884 8322419 Afer_0364 Acidimicrobium ferrooxidans DSM 10331 NADH-quinone oxidoreductase subunit B YP_003109005.1 373342 D 525909 CDS YP_003109006.1 256371182 8322420 373881..374321 1 NC_013124.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: aba:Acid345_1314 NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase (ubiquinone) 30 kDa subunit 374321 8322420 Afer_0365 Acidimicrobium ferrooxidans DSM 10331 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_003109006.1 373881 D 525909 CDS YP_003109007.1 256371183 8322421 374421..375674 1 NC_013124.1 KEGG: fra:Francci3_0541 NADH dehydrogenase subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I, D subunit 375674 8322421 Afer_0366 Acidimicrobium ferrooxidans DSM 10331 NADH dehydrogenase I, D subunit YP_003109007.1 374421 D 525909 CDS YP_003109008.1 256371184 8322422 375675..376301 1 NC_013124.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: msm:MSMEG_2059 NADH-quinone oxidoreductase chain E; NADH-quinone oxidoreductase, E subunit 376301 8322422 Afer_0367 Acidimicrobium ferrooxidans DSM 10331 NADH-quinone oxidoreductase, E subunit YP_003109008.1 375675 D 525909 CDS YP_003109009.1 256371185 8322423 376298..377596 1 NC_013124.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mxa:MXAN_1085 NADH dehydrogenase I, F subunit; NADH dehydrogenase (quinone) 377596 8322423 Afer_0368 Acidimicrobium ferrooxidans DSM 10331 NADH dehydrogenase (quinone) YP_003109009.1 376298 D 525909 CDS YP_003109010.1 256371186 8322424 377589..380090 1 NC_013124.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; ferredoxin; KEGG: tfu:Tfu_2689 NADH dehydrogenase subunit G; NADH-quinone oxidoreductase subunit G 380090 8322424 Afer_0369 Acidimicrobium ferrooxidans DSM 10331 NADH-quinone oxidoreductase subunit G YP_003109010.1 377589 D 525909 CDS YP_003109011.1 256371187 8322425 380080..381342 1 NC_013124.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: ace:Acel_0274 NADH dehydrogenase subunit H; NADH dehydrogenase (quinone) 381342 8322425 Afer_0370 Acidimicrobium ferrooxidans DSM 10331 NADH dehydrogenase (quinone) YP_003109011.1 380080 D 525909 CDS YP_003109012.1 256371188 8322426 381323..382012 1 NC_013124.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: fre:Franean1_6086 NADH dehydrogenase subunit I; NADH-quinone oxidoreductase subunit I 382012 8322426 Afer_0371 Acidimicrobium ferrooxidans DSM 10331 NADH-quinone oxidoreductase subunit I YP_003109012.1 381323 D 525909 CDS YP_003109013.1 256371189 8322427 382009..382587 1 NC_013124.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: sen:SACE_6893 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 382587 8322427 Afer_0372 Acidimicrobium ferrooxidans DSM 10331 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_003109013.1 382009 D 525909 CDS YP_003109014.1 256371190 8322428 382584..382886 1 NC_013124.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rrs:RoseRS_2233 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 382886 8322428 Afer_0373 Acidimicrobium ferrooxidans DSM 10331 NADH-ubiquinone oxidoreductase chain 4L YP_003109014.1 382584 D 525909 CDS YP_003109015.1 256371191 8322429 382893..384770 1 NC_013124.1 KEGG: glo:Glov_3127 proton-translocating NADH- quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 384770 8322429 Afer_0374 Acidimicrobium ferrooxidans DSM 10331 proton-translocating NADH-quinone oxidoreductase subunit L YP_003109015.1 382893 D 525909 CDS YP_003109016.1 256371192 8322430 384786..386324 1 NC_013124.1 KEGG: fre:Franean1_6082 proton-translocating NADH- quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 386324 8322430 Afer_0375 Acidimicrobium ferrooxidans DSM 10331 proton-translocating NADH-quinone oxidoreductase subunit M YP_003109016.1 384786 D 525909 CDS YP_003109017.1 256371193 8322431 386321..387892 1 NC_013124.1 KEGG: rrs:RoseRS_2230 proton-translocating NADH- quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 387892 8322431 Afer_0376 Acidimicrobium ferrooxidans DSM 10331 proton-translocating NADH-quinone oxidoreductase subunit N YP_003109017.1 386321 D 525909 CDS YP_003109018.1 256371194 8322432 complement(387910..388701) 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: stp:Strop_0725 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 388701 8322432 Afer_0377 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003109018.1 387910 R 525909 CDS YP_003109019.1 256371195 8322433 complement(388694..391510) 1 NC_013124.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: sma:SAV_4673 hypothetical protein; hypothetical protein 391510 8322433 Afer_0378 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109019.1 388694 R 525909 CDS YP_003109020.1 256371196 8322434 complement(391512..392006) 1 NC_013124.1 PFAM: protein of unknown function DUF520; KEGG: saq:Sare_0477 nucleotide-binding protein; hypothetical protein 392006 8322434 Afer_0379 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109020.1 391512 R 525909 CDS YP_003109021.1 256371197 8322436 392231..393799 1 NC_013124.1 KEGG: sen:SACE_2172 hypothetical protein; hypothetical protein 393799 8322436 Afer_0380 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109021.1 392231 D 525909 CDS YP_003109022.1 256371198 8322437 393790..394542 1 NC_013124.1 PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: met:M446_4878 HhH-GPD family protein; HhH-GPD family protein 394542 8322437 Afer_0381 Acidimicrobium ferrooxidans DSM 10331 HhH-GPD family protein YP_003109022.1 393790 D 525909 CDS YP_003109023.1 256371199 8322438 complement(394432..394932) 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pzu:PHZ_c2723 phosphinothricin N- acetyltransferase; GCN5-like N-acetyltransferase 394932 8322438 Afer_0382 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003109023.1 394432 R 525909 CDS YP_003109024.1 256371200 8322441 395174..395338 1 NC_013124.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: dau:Daud_0208 ribosomal protein L33; 50S ribosomal protein L33 395338 8322441 Afer_0383 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L33 YP_003109024.1 395174 D 525909 CDS YP_003109025.1 256371201 8322442 395455..395994 1 NC_013124.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: scl:sce8793 ECF family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 395994 8322442 Afer_0384 Acidimicrobium ferrooxidans DSM 10331 ECF subfamily RNA polymerase sigma-24 subunit YP_003109025.1 395455 D 525909 CDS YP_003109026.1 256371202 8322444 396162..396422 1 NC_013124.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: nfa:nfa51170 preprotein translocase subunit SecE; preprotein translocase subunit SecE 396422 8322444 Afer_0385 Acidimicrobium ferrooxidans DSM 10331 preprotein translocase subunit SecE YP_003109026.1 396162 D 525909 CDS YP_003109027.1 256371203 8322445 396466..397197 1 NC_013124.1 KEGG: fre:Franean1_6062 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor 397197 8322445 Afer_0386 Acidimicrobium ferrooxidans DSM 10331 NusG antitermination factor YP_003109027.1 396466 D 525909 CDS YP_003109028.1 256371204 8322446 397324..397755 1 NC_013124.1 KEGG: nca:Noca_0696 50S ribosomal protein L11P; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 397755 8322446 Afer_0387 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L11 YP_003109028.1 397324 D 525909 CDS YP_003109029.1 256371205 8322447 397781..398506 1 NC_013124.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: tfu:Tfu_2657 50S ribosomal protein L1P; 50S ribosomal protein L1 398506 8322447 Afer_0388 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L1 YP_003109029.1 397781 D 525909 CDS YP_003109030.1 256371206 8322448 398655..399179 1 NC_013124.1 PFAM: ribosomal protein L10; KEGG: pac:PPA1887 50S ribosomal protein L10; 50S ribosomal protein L10 399179 8322448 Afer_0389 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L10 YP_003109030.1 398655 D 525909 CDS YP_003109031.1 256371207 8322449 399213..399599 1 NC_013124.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: fra:Francci3_0572 50S ribosomal protein L7/L12; 50S ribosomal protein L7/L12 399599 8322449 Afer_0390 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L7/L12 YP_003109031.1 399213 D 525909 CDS YP_003109032.1 256371208 8322450 399848..403393 1 NC_013124.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; KEGG: fal:FRAAL1072 DNA-directed RNA polymerase subunit beta; DNA-directed RNA polymerase subunit beta 403393 8322450 Afer_0391 Acidimicrobium ferrooxidans DSM 10331 DNA-directed RNA polymerase subunit beta YP_003109032.1 399848 D 525909 CDS YP_003109033.1 256371209 8322451 403393..407256 1 NC_013124.1 KEGG: ace:Acel_0300 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 407256 8322451 Afer_0392 Acidimicrobium ferrooxidans DSM 10331 DNA-directed RNA polymerase subunit beta' YP_003109033.1 403393 D 525909 CDS YP_003109034.1 256371210 8322452 407427..407798 1 NC_013124.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: ace:Acel_0301 30S ribosomal protein S12; 30S ribosomal protein S12 407798 8322452 Afer_0393 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S12 YP_003109034.1 407427 D 525909 CDS YP_003109035.1 256371211 8322453 407802..408272 1 NC_013124.1 TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: msm:MSMEG_1399 ribosomal protein S7; 30S ribosomal protein S7 408272 8322453 Afer_0394 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S7 YP_003109035.1 407802 D 525909 CDS YP_003109036.1 256371212 8322454 408289..410376 1 NC_013124.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: mta:Moth_2463 elongation factor G; translation elongation factor G 410376 8322454 Afer_0395 Acidimicrobium ferrooxidans DSM 10331 translation elongation factor G YP_003109036.1 408289 D 525909 CDS YP_003109037.1 256371213 8322455 410452..411639 1 NC_013124.1 KEGG: ace:Acel_0304 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; translation elongation factor Tu 411639 8322455 Afer_0396 Acidimicrobium ferrooxidans DSM 10331 translation elongation factor Tu YP_003109037.1 410452 D 525909 CDS YP_003109038.1 256371214 8322456 411720..412046 1 NC_013124.1 TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: saq:Sare_4316 30S ribosomal protein S10; 30S ribosomal protein S10 412046 8322456 Afer_0397 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S10 YP_003109038.1 411720 D 525909 CDS YP_003109039.1 256371215 8322457 412223..412864 1 NC_013124.1 PFAM: ribosomal protein L3; KEGG: ace:Acel_0306 50S ribosomal protein L3P; 50S ribosomal protein L3 412864 8322457 Afer_0398 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L3 YP_003109039.1 412223 D 525909 CDS YP_003109040.1 256371216 8322458 412865..413509 1 NC_013124.1 PFAM: ribosomal protein L4/L1e; KEGG: saq:Sare_4314 ribosomal protein L4/L1e; 50S ribosomal protein L4/L1e 413509 8322458 Afer_0399 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L4/L1e YP_003109040.1 412865 D 525909 CDS YP_003109041.1 256371217 8322459 413506..413802 1 NC_013124.1 PFAM: Ribosomal protein L25/L23; KEGG: pac:PPA1861 50S ribosomal protein L23; 50S ribosomal protein L25/L23 413802 8322459 Afer_0400 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L25/L23 YP_003109041.1 413506 D 525909 CDS YP_003109042.1 256371218 8322460 413806..414642 1 NC_013124.1 TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: nfa:nfa7360 50S ribosomal protein L2; 50S ribosomal protein L2 414642 8322460 Afer_0401 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L2 YP_003109042.1 413806 D 525909 CDS YP_003109043.1 256371219 8322461 414646..414927 1 NC_013124.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: sen:SACE_6832 30S ribosomal protein S19; 30S ribosomal protein S19 414927 8322461 Afer_0402 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S19 YP_003109043.1 414646 D 525909 CDS YP_003109044.1 256371220 8322462 414927..415583 1 NC_013124.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: mkm:Mkms_1035 50S ribosomal protein L22; 50S ribosomal protein L22 415583 8322462 Afer_0403 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L22 YP_003109044.1 414927 D 525909 CDS YP_003109045.1 256371221 8322463 415587..416453 1 NC_013124.1 KEGG: tfu:Tfu_2640 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 416453 8322463 Afer_0404 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S3 YP_003109045.1 415587 D 525909 CDS YP_003109046.1 256371222 8322464 416456..416893 1 NC_013124.1 TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: rxy:Rxyl_2148 50S ribosomal protein L16; 50S ribosomal protein L16 416893 8322464 Afer_0405 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L16 YP_003109046.1 416456 D 525909 CDS YP_003109047.1 256371223 8322465 416890..417126 1 NC_013124.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: cak:Caul_1622 ribosomal protein L29; 50S ribosomal protein L29 417126 8322465 Afer_0406 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L29 YP_003109047.1 416890 D 525909 CDS YP_003109048.1 256371224 8322466 417123..417395 1 NC_013124.1 PFAM: ribosomal protein S17; KEGG: ace:Acel_0315 SSU ribosomal protein S17P; 30S ribosomal protein S17 417395 8322466 Afer_0407 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S17 YP_003109048.1 417123 D 525909 CDS YP_003109049.1 256371225 8322467 417392..417760 1 NC_013124.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: saq:Sare_4305 50S ribosomal protein L14; 50S ribosomal protein L14 417760 8322467 Afer_0408 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L14 YP_003109049.1 417392 D 525909 CDS YP_003109050.1 256371226 8322468 417761..418066 1 NC_013124.1 KEGG: chy:CHY_2298 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; 50S ribosomal protein L24 418066 8322468 Afer_0409 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L24 YP_003109050.1 417761 D 525909 CDS YP_003109051.1 256371227 8322469 418066..418635 1 NC_013124.1 PFAM: ribosomal protein L5; KEGG: fra:Francci3_0594 50S ribosomal protein L5; 50S ribosomal protein L5 418635 8322469 Afer_0410 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L5 YP_003109051.1 418066 D 525909 CDS YP_003109052.1 256371228 8322470 418635..418820 1 NC_013124.1 PFAM: ribosomal protein S14; KEGG: tfu:Tfu_2633 SSU ribosomal protein S14P; 30S ribosomal protein S14 418820 8322470 Afer_0411 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S14 YP_003109052.1 418635 D 525909 CDS YP_003109053.1 256371229 8322471 418833..419243 1 NC_013124.1 PFAM: ribosomal protein S8; KEGG: cjk:jk1797 30S ribosomal protein S8; 30S ribosomal protein S8 419243 8322471 Afer_0412 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S8 YP_003109053.1 418833 D 525909 CDS YP_003109054.1 256371230 8322472 419252..419791 1 NC_013124.1 PFAM: ribosomal protein L6; KEGG: ace:Acel_0321 50S ribosomal protein L6P; 50S ribosomal protein L6 419791 8322472 Afer_0413 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L6 YP_003109054.1 419252 D 525909 CDS YP_003109055.1 256371231 8322473 419802..420161 1 NC_013124.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: rrs:RoseRS_1169 ribosomal protein L18; 50S ribosomal protein L18 420161 8322473 Afer_0414 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L18 YP_003109055.1 419802 D 525909 CDS YP_003109056.1 256371232 8322474 420162..420713 1 NC_013124.1 TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; KEGG: cur:cur_0351 30S ribosomal protein S5; 30S ribosomal protein S5 420713 8322474 Afer_0415 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S5 YP_003109056.1 420162 D 525909 CDS YP_003109057.1 256371233 8322475 420706..420897 1 NC_013124.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: rxy:Rxyl_2137 LSU ribosomal protein L30P; 50S ribosomal protein L30 420897 8322475 Afer_0416 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L30 YP_003109057.1 420706 D 525909 CDS YP_003109058.1 256371234 8322476 420894..421394 1 NC_013124.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: kra:Krad_0707 50S ribosomal protein L15; 50S ribosomal protein L15 421394 8322476 Afer_0417 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L15 YP_003109058.1 420894 D 525909 CDS YP_003109059.1 256371235 8322477 421417..422712 1 NC_013124.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: fre:Franean1_6029 preprotein translocase subunit SecY; preprotein translocase subunit SecY 422712 8322477 Afer_0418 Acidimicrobium ferrooxidans DSM 10331 preprotein translocase subunit SecY YP_003109059.1 421417 D 525909 CDS YP_003109060.1 256371236 8322478 422713..423390 1 NC_013124.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: mta:Moth_2439 adenylate kinase; adenylate kinase 423390 8322478 Afer_0419 Acidimicrobium ferrooxidans DSM 10331 adenylate kinase YP_003109060.1 422713 D 525909 CDS YP_003109061.1 256371237 8322479 423387..424142 1 NC_013124.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: sma:SAV_4948 methionine aminopeptidase; methionine aminopeptidase, type I 424142 8322479 Afer_0420 Acidimicrobium ferrooxidans DSM 10331 methionine aminopeptidase, type I YP_003109061.1 423387 D 525909 CDS YP_003109062.1 256371238 8322480 424236..424460 1 NC_013124.1 KEGG: bha:BH0158 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; SMART: RNA binding S1 domain protein; translation initiation factor IF-1 424460 8322480 Afer_0421 Acidimicrobium ferrooxidans DSM 10331 translation initiation factor IF-1 YP_003109062.1 424236 D 525909 CDS YP_003109063.1 256371239 8322481 424535..424648 1 NC_013124.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: lwe:lwe2559 50S ribosomal protein L36; 50S ribosomal protein L36 424648 8322481 Afer_0422 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L36 YP_003109063.1 424535 D 525909 CDS YP_003109064.1 256371240 8322482 424652..425029 1 NC_013124.1 PFAM: ribosomal protein S13; KEGG: ace:Acel_0331 30S ribosomal protein S13; 30S ribosomal protein S13 425029 8322482 Afer_0423 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S13 YP_003109064.1 424652 D 525909 CDS YP_003109065.1 256371241 8322483 425195..425593 1 NC_013124.1 PFAM: ribosomal protein S11; ribosomal protein L18P/L5E; KEGG: tte:TTE2265 30S ribosomal protein S11; 30S ribosomal protein S11 425593 8322483 Afer_0424 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S11 YP_003109065.1 425195 D 525909 CDS YP_003109066.1 256371242 8322484 425594..426220 1 NC_013124.1 KEGG: sth:STH3048 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 426220 8322484 Afer_0425 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S4 YP_003109066.1 425594 D 525909 CDS YP_003109067.1 256371243 8322485 426272..427210 1 NC_013124.1 KEGG: mjl:Mjls_1142 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerization; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 427210 8322485 Afer_0426 Acidimicrobium ferrooxidans DSM 10331 DNA-directed RNA polymerase subunit alpha YP_003109067.1 426272 D 525909 CDS YP_003109068.1 256371244 8322486 427212..427568 1 NC_013124.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: sma:SAV_4954 50S ribosomal protein L17; 50S ribosomal protein L17 427568 8322486 Afer_0427 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L17 YP_003109068.1 427212 D 525909 CDS YP_003109069.1 256371245 8322487 427642..428526 1 NC_013124.1 PFAM: tRNA pseudouridine synthase; KEGG: tfu:Tfu_2616 tRNA pseudouridine synthase A; tRNA pseudouridine synthase 428526 8322487 Afer_0428 Acidimicrobium ferrooxidans DSM 10331 tRNA pseudouridine synthase YP_003109069.1 427642 D 525909 CDS YP_003109070.1 256371246 8322488 428721..429185 1 NC_013124.1 TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: sen:SACE_6781 50S ribosomal protein L13; 50S ribosomal protein L13 429185 8322488 Afer_0429 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L13 YP_003109070.1 428721 D 525909 CDS YP_003109071.1 256371247 8322489 429182..429574 1 NC_013124.1 PFAM: ribosomal protein S9; KEGG: bsu:BSU01500 30S ribosomal protein S9; 30S ribosomal protein S9 429574 8322489 Afer_0430 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S9 YP_003109071.1 429182 D 525909 CDS YP_003109072.1 256371248 8322490 429574..430902 1 NC_013124.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: dau:Daud_0359 phosphoglucosamine mutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 430902 8322490 Afer_0431 Acidimicrobium ferrooxidans DSM 10331 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_003109072.1 429574 D 525909 CDS YP_003109073.1 256371249 8322491 430963..432804 1 NC_013124.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: tfu:Tfu_2611 D-fructose-6-phosphate amidotransferase; glucosamine/fructose-6-phosphate aminotransferase 432804 8322491 Afer_0432 Acidimicrobium ferrooxidans DSM 10331 glucosamine/fructose-6-phosphate aminotransferase YP_003109073.1 430963 D 525909 CDS YP_003109074.1 256371250 8322492 complement(432964..434064) 1 NC_013124.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: rce:RC1_0015 C4-dicarboxylate transporter; C4-dicarboxylate transporter/malic acid transport protein 434064 8322492 Afer_0433 Acidimicrobium ferrooxidans DSM 10331 C4-dicarboxylate transporter/malic acid transport protein YP_003109074.1 432964 R 525909 CDS YP_003109075.1 256371251 8322493 434176..435108 1 NC_013124.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dge:Dgeo_2840 LysR family transcriptional regulator; LysR family transcriptional regulator 435108 8322493 Afer_0434 Acidimicrobium ferrooxidans DSM 10331 LysR family transcriptional regulator YP_003109075.1 434176 D 525909 CDS YP_003109076.1 256371252 8322494 435109..435474 1 NC_013124.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: saq:Sare_4249 holo-acyl-carrier-protein synthase; holo-acyl-carrier-protein synthase 435474 8322494 Afer_0435 Acidimicrobium ferrooxidans DSM 10331 holo-acyl-carrier-protein synthase YP_003109076.1 435109 D 525909 CDS YP_003109077.1 256371253 8322495 435558..437000 1 NC_013124.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF- family domain protein; KEGG: ace:Acel_0345 carbohydrate kinase, YjeF related protein; carbohydrate kinase, YjeF-like protein 437000 8322495 Afer_0436 Acidimicrobium ferrooxidans DSM 10331 carbohydrate kinase, YjeF-like protein YP_003109077.1 435558 D 525909 CDS YP_003109078.1 256371254 8322496 436997..438088 1 NC_013124.1 KEGG: ace:Acel_0355 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 438088 8322496 Afer_0437 Acidimicrobium ferrooxidans DSM 10331 alanine racemase YP_003109078.1 436997 D 525909 CDS YP_003109079.1 256371255 8322497 438075..438644 1 NC_013124.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: eba:ebA6487 DNA polymerase-related protein,bacteriophage-type; phage SPO1 DNA polymerase-like protein 438644 8322497 Afer_0438 Acidimicrobium ferrooxidans DSM 10331 phage SPO1 DNA polymerase-like protein YP_003109079.1 438075 D 525909 CDS YP_003109080.1 256371256 8322498 438641..439102 1 NC_013124.1 PFAM: protein of unknown function UPF0079; KEGG: xfn:XfasM23_2004 hypothetical protein; hypothetical protein 439102 8322498 Afer_0439 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109080.1 438641 D 525909 CDS YP_003109081.1 256371257 8322499 439099..439746 1 NC_013124.1 PFAM: peptidase M22 glycoprotease; KEGG: mag:amb4455 hypothetical protein; peptidase M22 glycoprotease 439746 8322499 Afer_0440 Acidimicrobium ferrooxidans DSM 10331 peptidase M22 glycoprotease YP_003109081.1 439099 D 525909 CDS YP_003109082.1 256371258 8322500 439743..440246 1 NC_013124.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: tte:TTE0537 acetyltransferase; ribosomal-protein-alanine acetyltransferase 440246 8322500 Afer_0441 Acidimicrobium ferrooxidans DSM 10331 ribosomal-protein-alanine acetyltransferase YP_003109082.1 439743 D 525909 CDS YP_003109083.1 256371259 8322501 440243..441286 1 NC_013124.1 KEGG: sma:SAV_4974 O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; metalloendopeptidase, glycoprotease family 441286 8322501 Afer_0442 Acidimicrobium ferrooxidans DSM 10331 metalloendopeptidase, glycoprotease family YP_003109083.1 440243 D 525909 CDS YP_003109084.1 256371260 8322502 441360..441653 1 NC_013124.1 PFAM: chaperonin Cpn10; KEGG: kra:Krad_0735 co-chaperonin GroES; chaperonin Cpn10 441653 8322502 Afer_0443 Acidimicrobium ferrooxidans DSM 10331 chaperonin Cpn10 YP_003109084.1 441360 D 525909 CDS YP_003109085.1 256371261 8322503 441656..443290 1 NC_013124.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: sco:SCO4762 chaperonin GroEL; chaperonin GroEL 443290 8322503 Afer_0444 Acidimicrobium ferrooxidans DSM 10331 chaperonin GroEL YP_003109085.1 441656 D 525909 CDS YP_003109086.1 256371262 8322504 complement(443590..444081) 1 NC_013124.1 PFAM: membrane protein of uknown function UCP014873; KEGG: bcs:BCAN_B0338 hypothetical protein; hypothetical protein 444081 8322504 Afer_0445 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109086.1 443590 R 525909 CDS YP_003109087.1 256371263 8322505 444888..445208 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 445208 8322505 Afer_0446 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109087.1 444888 D 525909 CDS YP_003109088.1 256371264 8322506 445208..446077 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_5060 integrase catalytic subunit; integrase catalytic subunit 446077 8322506 Afer_0447 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109088.1 445208 D 525909 CDS YP_003109089.1 256371265 8322507 446155..446712 1 NC_013124.1 KEGG: hypothetical protein; hypothetical protein 446712 8322507 Afer_0448 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109089.1 446155 D 525909 CDS YP_003109090.1 256371266 8322508 446709..447626 1 NC_013124.1 KEGG: bca:BCE_2353 triple helix repeat-containing collagen; hypothetical protein 447626 8322508 Afer_0449 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109090.1 446709 D 525909 CDS YP_003109091.1 256371267 8322509 447623..449665 1 NC_013124.1 KEGG: sma:SAV_2331 hypothetical protein; integral membrane protein 449665 8322509 Afer_0450 Acidimicrobium ferrooxidans DSM 10331 integral membrane protein YP_003109091.1 447623 D 525909 CDS YP_003109092.1 256371268 8322510 449667..451736 1 NC_013124.1 KEGG: stp:Strop_0191 hypothetical protein; hypothetical protein 451736 8322510 Afer_0451 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109092.1 449667 D 525909 CDS YP_003109093.1 256371269 8322511 451746..452804 1 NC_013124.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bha:BH4010 hypothetical protein; sortase family protein 452804 8322511 Afer_0452 Acidimicrobium ferrooxidans DSM 10331 sortase family protein YP_003109093.1 451746 D 525909 CDS YP_003109094.1 256371270 8322512 453006..453779 1 NC_013124.1 PFAM: NUDIX hydrolase; KEGG: afw:Anae109_0164 NUDIX hydrolase; NUDIX hydrolase 453779 8322512 Afer_0453 Acidimicrobium ferrooxidans DSM 10331 NUDIX hydrolase YP_003109094.1 453006 D 525909 CDS YP_003109095.1 256371271 8322513 complement(453758..454534) 1 NC_013124.1 KEGG: tfu:Tfu_2983 hypothetical protein; hypothetical protein 454534 8322513 Afer_0454 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109095.1 453758 R 525909 CDS YP_003109096.1 256371272 8322514 complement(454578..454955) 1 NC_013124.1 PFAM: Camphor resistance CrcB protein; KEGG: msm:MSMEG_2134 CrcB protein; Camphor resistance CrcB protein 454955 8322514 Afer_0455 Acidimicrobium ferrooxidans DSM 10331 Camphor resistance CrcB protein YP_003109096.1 454578 R 525909 CDS YP_003109097.1 256371273 8322515 complement(454952..455290) 1 NC_013124.1 PFAM: protein of unknown function DUF190; KEGG: nca:Noca_2956 hypothetical protein; hypothetical protein 455290 8322515 Afer_0456 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109097.1 454952 R 525909 CDS YP_003109098.1 256371274 8322516 complement(455287..455736) 1 NC_013124.1 PFAM: Camphor resistance CrcB protein; KEGG: cms:CMS_0830 integral membrane protein; Camphor resistance CrcB protein 455736 8322516 Afer_0457 Acidimicrobium ferrooxidans DSM 10331 Camphor resistance CrcB protein YP_003109098.1 455287 R 525909 CDS YP_003109099.1 256371275 8322517 complement(455733..456641) 1 NC_013124.1 KEGG: cyt:cce_0886 phosphate ABC transporter, periplasmic phosphate-binding protein; hypothetical protein 456641 8322517 Afer_0458 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109099.1 455733 R 525909 CDS YP_003109100.1 256371276 8322518 456752..457915 1 NC_013124.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 457915 8322518 Afer_0459 Acidimicrobium ferrooxidans DSM 10331 inosine 5-monophosphate dehydrogenase YP_003109100.1 456752 D 525909 CDS YP_003109101.1 256371277 8322519 457915..459468 1 NC_013124.1 KEGG: fre:Franean1_5989 bifunctional GMP synthase/glutamine amidotransferase protein; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; ExsB family protein; glutamine amidotransferase class-I; GMP synthase, large subunit 459468 8322519 Afer_0460 Acidimicrobium ferrooxidans DSM 10331 GMP synthase, large subunit YP_003109101.1 457915 D 525909 CDS YP_003109102.1 256371278 8322520 459473..461620 1 NC_013124.1 PFAM: UvrD/REP helicase; KEGG: tfu:Tfu_2580 ATP-dependent DNA helicase PcrA; UvrD/REP helicase 461620 8322520 Afer_0461 Acidimicrobium ferrooxidans DSM 10331 UvrD/REP helicase YP_003109102.1 459473 D 525909 CDS YP_003109103.1 256371279 8322521 462017..463270 1 NC_013124.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_0861 NAD-dependent epimerase/dehydratase; UDP-sulfoquinovose synthase 463270 8322521 Afer_0462 Acidimicrobium ferrooxidans DSM 10331 UDP-sulfoquinovose synthase YP_003109103.1 462017 D 525909 CDS YP_003109104.1 256371280 8322522 463307..464821 1 NC_013124.1 KEGG: ace:Acel_1450 RND family efflux transporter MFP subunit; hypothetical protein 464821 8322522 Afer_0463 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109104.1 463307 D 525909 CDS YP_003109105.1 256371281 8322523 464818..466713 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: mkm:Mkms_4650 glycosyl transferase, family 2; family 2 glycosyl transferase 466713 8322523 Afer_0464 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003109105.1 464818 D 525909 CDS YP_003109106.1 256371282 8322524 466697..467563 1 NC_013124.1 hypothetical protein 467563 8322524 Afer_0465 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109106.1 466697 D 525909 CDS YP_003109107.1 256371283 8322525 467599..468441 1 NC_013124.1 hypothetical protein 468441 8322525 Afer_0466 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109107.1 467599 D 525909 CDS YP_003109108.1 256371284 8322526 468506..468910 1 NC_013124.1 hypothetical protein 468910 8322526 Afer_0467 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109108.1 468506 D 525909 CDS YP_003109109.1 256371285 8322528 complement(470047..470931) 1 NC_013124.1 PFAM: Squalene/phytoene synthase; KEGG: saq:Sare_4931 squalene/phytoene synthase; Squalene/phytoene synthase 470931 8322528 Afer_0469 Acidimicrobium ferrooxidans DSM 10331 Squalene/phytoene synthase YP_003109109.1 470047 R 525909 CDS YP_003109110.1 256371286 8322529 complement(470928..472418) 1 NC_013124.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nfa:nfa43990 phytoene desaturase; phytoene desaturase 472418 8322529 Afer_0470 Acidimicrobium ferrooxidans DSM 10331 phytoene desaturase YP_003109110.1 470928 R 525909 CDS YP_003109111.1 256371287 8322530 complement(472422..473510) 1 NC_013124.1 PFAM: Polyprenyl synthetase; KEGG: saq:Sare_3478 polyprenyl synthetase; polyprenyl synthetase 473510 8322530 Afer_0471 Acidimicrobium ferrooxidans DSM 10331 polyprenyl synthetase YP_003109111.1 472422 R 525909 CDS YP_003109112.1 256371288 8322531 473643..475022 1 NC_013124.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: hmo:HM1_0268 modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 475022 8322531 Afer_0472 Acidimicrobium ferrooxidans DSM 10331 peptidase U62 modulator of DNA gyrase YP_003109112.1 473643 D 525909 CDS YP_003109113.1 256371289 8322532 475015..476352 1 NC_013124.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: pth:PTH_1159 Zn-dependent protease; peptidase U62 modulator of DNA gyrase 476352 8322532 Afer_0473 Acidimicrobium ferrooxidans DSM 10331 peptidase U62 modulator of DNA gyrase YP_003109113.1 475015 D 525909 CDS YP_003109114.1 256371290 8322533 476353..476988 1 NC_013124.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dge:Dgeo_2010 PHP-like protein; PHP domain-containing protein 476988 8322533 Afer_0474 Acidimicrobium ferrooxidans DSM 10331 PHP domain-containing protein YP_003109114.1 476353 D 525909 CDS YP_003109115.1 256371291 8322534 477021..478262 1 NC_013124.1 PFAM: MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mav:MAV_2122 MgtE intracellular domain family protein; MgtE intracellular region 478262 8322534 Afer_0475 Acidimicrobium ferrooxidans DSM 10331 MgtE intracellular region YP_003109115.1 477021 D 525909 CDS YP_003109116.1 256371292 8322535 complement(478345..479928) 1 NC_013124.1 KEGG: ace:Acel_0596 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 479928 8322535 Afer_0476 Acidimicrobium ferrooxidans DSM 10331 natural resistance-associated macrophage protein YP_003109116.1 478345 R 525909 CDS YP_003109117.1 256371293 8322536 complement(480108..480815) 1 NC_013124.1 PFAM: Methyltransferase type 11; methyltransferase small; Methyltransferase type 12; KEGG: hsl:OE2833R hypothetical protein; type 11 methyltransferase 480815 8322536 Afer_0477 Acidimicrobium ferrooxidans DSM 10331 type 11 methyltransferase YP_003109117.1 480108 R 525909 CDS YP_003109118.1 256371294 8322537 480859..481488 1 NC_013124.1 PFAM: protein of unknown function DUF159; KEGG: scl:sce8138 hypothetical protein; hypothetical protein 481488 8322537 Afer_0478 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109118.1 480859 D 525909 CDS YP_003109119.1 256371295 8322538 complement(481469..483376) 1 NC_013124.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: mab:MAB_2990c 1-deoxy-D-xylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase 483376 8322538 Afer_0479 Acidimicrobium ferrooxidans DSM 10331 deoxyxylulose-5-phosphate synthase YP_003109119.1 481469 R 525909 CDS YP_003109120.1 256371296 8322539 483457..483783 1 NC_013124.1 TIGRFAM: lycopene cyclase domain protein; KEGG: mjl:Mjls_5456 hypothetical protein; lycopene cyclase domain-containing protein 483783 8322539 Afer_0480 Acidimicrobium ferrooxidans DSM 10331 lycopene cyclase domain-containing protein YP_003109120.1 483457 D 525909 CDS YP_003109121.1 256371297 8322540 483780..484088 1 NC_013124.1 TIGRFAM: lycopene cyclase domain protein; KEGG: mmi:MMAR_4809 lycopene cyclase, CrtYd; lycopene cyclase domain-containing protein 484088 8322540 Afer_0481 Acidimicrobium ferrooxidans DSM 10331 lycopene cyclase domain-containing protein YP_003109121.1 483780 D 525909 CDS YP_003109122.1 256371298 8322541 484153..484614 1 NC_013124.1 PFAM: fatty acid hydroxylase; KEGG: xau:Xaut_4535 carotene hydroxylase; fatty acid hydroxylase 484614 8322541 Afer_0482 Acidimicrobium ferrooxidans DSM 10331 fatty acid hydroxylase YP_003109122.1 484153 D 525909 CDS YP_003109123.1 256371299 8322542 484684..485247 1 NC_013124.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pto:PTO1077 protease I; intracellular protease, PfpI family 485247 8322542 Afer_0483 Acidimicrobium ferrooxidans DSM 10331 intracellular protease, PfpI family YP_003109123.1 484684 D 525909 CDS YP_003109124.1 256371300 8322543 complement(485596..486060) 1 NC_013124.1 KEGG: fra:Francci3_2745 hypothetical protein; hypothetical protein 486060 8322543 Afer_0484 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109124.1 485596 R 525909 CDS YP_003109125.1 256371301 8322544 complement(486123..486617) 1 NC_013124.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: acr:Acry_1918 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated region 486617 8322544 Afer_0485 Acidimicrobium ferrooxidans DSM 10331 YbaK/prolyl-tRNA synthetase associated region YP_003109125.1 486123 R 525909 CDS YP_003109126.1 256371302 8322545 complement(486614..487867) 1 NC_013124.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: ace:Acel_0167 molybdopterin molybdochelatase; molybdenum cofactor synthesis domain-containing protein 487867 8322545 Afer_0486 Acidimicrobium ferrooxidans DSM 10331 molybdenum cofactor synthesis domain-containing protein YP_003109126.1 486614 R 525909 CDS YP_003109127.1 256371303 8322546 complement(487851..488741) 1 NC_013124.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sma:SAV_3673 UTP:glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 488741 8322546 Afer_0487 Acidimicrobium ferrooxidans DSM 10331 UTP-glucose-1-phosphate uridylyltransferase YP_003109127.1 487851 R 525909 CDS YP_003109128.1 256371304 8322547 488906..489229 1 NC_013124.1 TIGRFAM: regulatory protein, FmdB family; KEGG: kra:Krad_3694 FmdB family regulatory protein; FmdB family regulatory protein 489229 8322547 Afer_0488 Acidimicrobium ferrooxidans DSM 10331 FmdB family regulatory protein YP_003109128.1 488906 D 525909 CDS YP_003109129.1 256371305 8322548 489340..490569 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: sgr:SGR_5187 glycosyl transferase; group 1 glycosyl transferase 490569 8322548 Afer_0489 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003109129.1 489340 D 525909 CDS YP_003109130.1 256371306 8322549 490566..491234 1 NC_013124.1 PFAM: Methyltransferase type 11; Methionine biosynthesis MetW protein; Methyltransferase type 12; KEGG: tfu:Tfu_0572 hypothetical protein; type 11 methyltransferase 491234 8322549 Afer_0490 Acidimicrobium ferrooxidans DSM 10331 type 11 methyltransferase YP_003109130.1 490566 D 525909 CDS YP_003109131.1 256371307 8322550 491228..492223 1 NC_013124.1 KEGG: nfa:nfa25760 hypothetical protein; hypothetical protein 492223 8322550 Afer_0491 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109131.1 491228 D 525909 CDS YP_003109132.1 256371308 8322551 complement(492195..492998) 1 NC_013124.1 KEGG: sgr:SGR_5196 hypothetical protein; hypothetical protein 492998 8322551 Afer_0492 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109132.1 492195 R 525909 CDS YP_003109133.1 256371309 8322552 complement(493006..495564) 1 NC_013124.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: ank:AnaeK_2441 peptidase M1 membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 495564 8322552 Afer_0493 Acidimicrobium ferrooxidans DSM 10331 peptidase M1 membrane alanine aminopeptidase YP_003109133.1 493006 R 525909 CDS YP_003109134.1 256371310 8322553 495618..496700 1 NC_013124.1 PFAM: PfkB domain protein; KEGG: rru:Rru_A0149 PfkB; PfkB domain-containing protein 496700 8322553 Afer_0494 Acidimicrobium ferrooxidans DSM 10331 PfkB domain-containing protein YP_003109134.1 495618 D 525909 CDS YP_003109135.1 256371311 8322554 497334..499886 1 NC_013124.1 PFAM: glycoside hydrolase 15-related; KEGG: ote:Oter_3331 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein 499886 8322554 Afer_0495 Acidimicrobium ferrooxidans DSM 10331 glycoside hydrolase 15-like protein YP_003109135.1 497334 D 525909 CDS YP_003109136.1 256371312 8322555 499929..501305 1 NC_013124.1 KEGG: afw:Anae109_0597 glucose-6-phosphate 1- dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 501305 8322555 Afer_0496 Acidimicrobium ferrooxidans DSM 10331 glucose-6-phosphate 1-dehydrogenase YP_003109136.1 499929 D 525909 CDS YP_003109137.1 256371313 8322556 501336..502205 1 NC_013124.1 PFAM: ROK family protein; KEGG: gka:GK2442 glucokinase; ROK family protein 502205 8322556 Afer_0497 Acidimicrobium ferrooxidans DSM 10331 ROK family protein YP_003109137.1 501336 D 525909 CDS YP_003109138.1 256371314 8322557 502202..503371 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: pto:PTO1267 transporter; major facilitator superfamily protein 503371 8322557 Afer_0498 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109138.1 502202 D 525909 CDS YP_003109139.1 256371315 8322558 complement(503385..504383) 1 NC_013124.1 KEGG: trq:TRQ2_0031 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase 504383 8322558 Afer_0499 Acidimicrobium ferrooxidans DSM 10331 galactose-1-phosphate uridylyltransferase YP_003109139.1 503385 R 525909 CDS YP_003109140.1 256371316 8322559 504505..505647 1 NC_013124.1 PFAM: aminotransferase class V; KEGG: ank:AnaeK_1104 aminotransferase class V; Cysteine desulfurase 505647 8322559 Afer_0500 Acidimicrobium ferrooxidans DSM 10331 Cysteine desulfurase YP_003109140.1 504505 D 525909 CDS YP_003109141.1 256371317 8322560 505644..506117 1 NC_013124.1 hypothetical protein 506117 8322560 Afer_0501 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109141.1 505644 D 525909 CDS YP_003109142.1 256371318 8322561 complement(506074..506796) 1 NC_013124.1 hypothetical protein 506796 8322561 Afer_0502 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109142.1 506074 R 525909 CDS YP_003109143.1 256371319 8322562 complement(507051..508340) 1 NC_013124.1 PFAM: Extracellular ligand-binding receptor; KEGG: hwa:HQ3303A ABC-type branched-chain amino acid transport systems, substrate-binding protein; Extracellular ligand-binding receptor 508340 8322562 Afer_0503 Acidimicrobium ferrooxidans DSM 10331 Extracellular ligand-binding receptor YP_003109143.1 507051 R 525909 CDS YP_003109144.1 256371320 8322563 complement(508361..509125) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cya:CYA_2623 hydrophobic amino acid ABC transporter ATP-binding protein; ABC transporter-like protein 509125 8322563 Afer_0504 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109144.1 508361 R 525909 CDS YP_003109145.1 256371321 8322564 complement(509106..509903) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hwa:HQ2964A ABC-type branched-chain amino acid transport systems, ATP-binding protein I; ABC transporter-like protein 509903 8322564 Afer_0505 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109145.1 509106 R 525909 CDS YP_003109146.1 256371322 8322565 complement(509890..510909) 1 NC_013124.1 PFAM: inner-membrane translocator; KEGG: cya:CYA_2478 hydrophobic amino acid ABC transporter permease; inner-membrane translocator 510909 8322565 Afer_0506 Acidimicrobium ferrooxidans DSM 10331 inner-membrane translocator YP_003109146.1 509890 R 525909 CDS YP_003109147.1 256371323 8322566 complement(510920..511795) 1 NC_013124.1 PFAM: inner-membrane translocator; KEGG: csa:Csal_1420 inner-membrane translocator; inner-membrane translocator 511795 8322566 Afer_0507 Acidimicrobium ferrooxidans DSM 10331 inner-membrane translocator YP_003109147.1 510920 R 525909 CDS YP_003109148.1 256371324 8322567 complement(513386..514060) 1 NC_013124.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sgr:SGR_1695 two-component system response regulator; response regulator receiver and unknown domain-containing protein 514060 8322567 Afer_0508 Acidimicrobium ferrooxidans DSM 10331 response regulator receiver and unknown domain-containing protein YP_003109148.1 513386 R 525909 CDS YP_003109149.1 256371325 8322568 514253..514573 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 514573 8322568 Afer_0509 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109149.1 514253 D 525909 CDS YP_003109150.1 256371326 8322569 514573..515442 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_5060 integrase catalytic subunit; integrase catalytic subunit 515442 8322569 Afer_0510 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109150.1 514573 D 525909 CDS YP_003109151.1 256371327 8322570 complement(515385..516950) 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: aau:AAur_0705 two component sensor histidine kinase; signal transduction histidine kinase regulating citrate/malate metabolism 516950 8322570 Afer_0511 Acidimicrobium ferrooxidans DSM 10331 signal transduction histidine kinase regulating citrate/malate metabolism YP_003109151.1 515385 R 525909 CDS YP_003109152.1 256371328 8322572 517643..518077 1 NC_013124.1 hypothetical protein 518077 8322572 Afer_0513 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109152.1 517643 D 525909 CDS YP_003109153.1 256371329 8322578 complement(520658..521536) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: amr:AM1_A0193 integrase, catalytic region; integrase catalytic subunit 521536 8322578 Afer_0519 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109153.1 520658 R 525909 CDS YP_003109154.1 256371330 8322579 complement(521533..521862) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 521862 8322579 Afer_0520 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109154.1 521533 R 525909 CDS YP_003109155.1 256371331 8322580 complement(522269..523873) 1 NC_013124.1 PFAM: phosphoesterase; KEGG: sai:Saci_1769 membrane associated phosphoesterase; phosphoesterase 523873 8322580 Afer_0521 Acidimicrobium ferrooxidans DSM 10331 phosphoesterase YP_003109155.1 522269 R 525909 CDS YP_003109156.1 256371332 8322581 complement(524486..526147) 1 NC_013124.1 KEGG: sgr:SGR_3644 ABC transporter ATP- binding protein and permease component; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase; Sigma 54 interacting domain-containing protein 526147 8322581 Afer_0522 Acidimicrobium ferrooxidans DSM 10331 Sigma 54 interacting domain-containing protein YP_003109156.1 524486 R 525909 CDS YP_003109157.1 256371333 8322582 complement(526144..527814) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_4258 ABC transporter ATP-binding protein; ABC transporter-like protein 527814 8322582 Afer_0523 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109157.1 526144 R 525909 CDS YP_003109158.1 256371334 8322583 complement(527811..528857) 1 NC_013124.1 KEGG: hau:Haur_3758 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 528857 8322583 Afer_0524 Acidimicrobium ferrooxidans DSM 10331 cytochrome d ubiquinol oxidase subunit II YP_003109158.1 527811 R 525909 CDS YP_003109159.1 256371335 8322584 complement(528867..530258) 1 NC_013124.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: ace:Acel_0600 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 530258 8322584 Afer_0525 Acidimicrobium ferrooxidans DSM 10331 cytochrome bd ubiquinol oxidase subunit I YP_003109159.1 528867 R 525909 CDS YP_003109160.1 256371336 8322585 complement(530644..531525) 1 NC_013124.1 PFAM: GHMP kinase; KEGG: pde:Pden_0423 4-diphosphocytidyl-2C-methyl-D- erythritol kinase; GHMP kinase 531525 8322585 Afer_0526 Acidimicrobium ferrooxidans DSM 10331 GHMP kinase YP_003109160.1 530644 R 525909 CDS YP_003109161.1 256371337 8322586 complement(531522..532361) 1 NC_013124.1 PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase; KEGG: gtn:GTNG_0035 dimethyladenosine transferase; ribosomal RNA adenine methylase transferase 532361 8322586 Afer_0527 Acidimicrobium ferrooxidans DSM 10331 ribosomal RNA adenine methylase transferase YP_003109161.1 531522 R 525909 CDS YP_003109162.1 256371338 8322587 complement(532367..533167) 1 NC_013124.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: scl:sce3778 TatD family deoxyribonuclease; hydrolase, TatD family 533167 8322587 Afer_0528 Acidimicrobium ferrooxidans DSM 10331 hydrolase, TatD family YP_003109162.1 532367 R 525909 CDS YP_003109163.1 256371339 8322588 complement(533164..534675) 1 NC_013124.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: ace:Acel_0175 methionyl-tRNA synthetase; methionyl-tRNA synthetase 534675 8322588 Afer_0529 Acidimicrobium ferrooxidans DSM 10331 methionyl-tRNA synthetase YP_003109163.1 533164 R 525909 CDS YP_003109164.1 256371340 8322589 complement(534716..535576) 1 NC_013124.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: aau:AAur_1330 tetrapyrrole methylase family protein; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 535576 8322589 Afer_0530 Acidimicrobium ferrooxidans DSM 10331 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003109164.1 534716 R 525909 CDS YP_003109165.1 256371341 8322590 complement(535573..535893) 1 NC_013124.1 hypothetical protein 535893 8322590 Afer_0531 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109165.1 535573 R 525909 CDS YP_003109166.1 256371342 8322591 complement(535890..536963) 1 NC_013124.1 TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related; KEGG: kra:Krad_1124 translation-associated GTPase; GTP-binding protein YchF 536963 8322591 Afer_0532 Acidimicrobium ferrooxidans DSM 10331 GTP-binding protein YchF YP_003109166.1 535890 R 525909 CDS YP_003109167.1 256371343 8322592 complement(537104..538216) 1 NC_013124.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; magnesium chelatase ChlI subunit; SMART: AAA ATPase; KEGG: rxy:Rxyl_1040 recombination factor protein RarA; AAA ATPase central domain-containing protein 538216 8322592 Afer_0533 Acidimicrobium ferrooxidans DSM 10331 AAA ATPase central domain-containing protein YP_003109167.1 537104 R 525909 CDS YP_003109168.1 256371344 8322593 complement(538213..539979) 1 NC_013124.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase- type; KEGG: fra:Francci3_0692 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 539979 8322593 Afer_0534 Acidimicrobium ferrooxidans DSM 10331 aspartyl-tRNA synthetase YP_003109168.1 538213 R 525909 CDS YP_003109169.1 256371345 8322594 540051..540773 1 NC_013124.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sco:SCO1853 precorrin-2 C20-methyltransferase; precorrin-2 C20-methyltransferase 540773 8322594 Afer_0535 Acidimicrobium ferrooxidans DSM 10331 precorrin-2 C20-methyltransferase YP_003109169.1 540051 D 525909 CDS YP_003109170.1 256371346 8322595 540770..541267 1 NC_013124.1 PFAM: cobalbumin biosynthesis protein; KEGG: nfa:nfa17010 cobinamide kinase/cobinamide phosphate guanylyltransferase; cobalbumin biosynthesis protein 541267 8322595 Afer_0536 Acidimicrobium ferrooxidans DSM 10331 cobalbumin biosynthesis protein YP_003109170.1 540770 D 525909 CDS YP_003109171.1 256371347 8322596 541268..541996 1 NC_013124.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cak:Caul_2743 cobalamin 5'-phosphate synthase; cobalamin-5-phosphate synthase CobS 541996 8322596 Afer_0537 Acidimicrobium ferrooxidans DSM 10331 cobalamin-5-phosphate synthase CobS YP_003109171.1 541268 D 525909 CDS YP_003109172.1 256371348 8322597 541983..542882 1 NC_013124.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: tfu:Tfu_2224 cobalamin biosynthesis protein; cobalamin biosynthesis protein CobD 542882 8322597 Afer_0538 Acidimicrobium ferrooxidans DSM 10331 cobalamin biosynthesis protein CobD YP_003109172.1 541983 D 525909 CDS YP_003109173.1 256371349 8322598 542892..543365 1 NC_013124.1 PFAM: protein of unknown function UPF0047; KEGG: ace:Acel_1034 hypothetical protein; hypothetical protein 543365 8322598 Afer_0539 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109173.1 542892 D 525909 CDS YP_003109174.1 256371350 8322599 complement(543362..543904) 1 NC_013124.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: chu:CHU_3843 dTDP-4-dehydrorhamnose 3,5- epimerase; dTDP-4-dehydrorhamnose 35-epimerase-like protein 543904 8322599 Afer_0540 Acidimicrobium ferrooxidans DSM 10331 dTDP-4-dehydrorhamnose 35-epimerase-like protein YP_003109174.1 543362 R 525909 CDS YP_003109175.1 256371351 8322600 544042..545217 1 NC_013124.1 KEGG: acr:Acry_1011 hypothetical protein; hypothetical protein 545217 8322600 Afer_0541 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109175.1 544042 D 525909 CDS YP_003109176.1 256371352 8322601 complement(545214..547286) 1 NC_013124.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: cmi:CMM_2114 protease II (oligopeptidase B); Oligopeptidase B 547286 8322601 Afer_0542 Acidimicrobium ferrooxidans DSM 10331 Oligopeptidase B YP_003109176.1 545214 R 525909 CDS YP_003109177.1 256371353 8322602 547369..548769 1 NC_013124.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: rxy:Rxyl_0170 iron-regulated ABC transporter membrane component SufB; FeS assembly protein SufB 548769 8322602 Afer_0543 Acidimicrobium ferrooxidans DSM 10331 FeS assembly protein SufB YP_003109177.1 547369 D 525909 CDS YP_003109178.1 256371354 8322603 549282..550685 1 NC_013124.1 KEGG: GSVIVT00021647001; assembled CDS; hypothetical protein 550685 8322603 Afer_0544 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109178.1 549282 D 525909 CDS YP_003109179.1 256371355 8322604 550718..551188 1 NC_013124.1 KEGG: hau:Haur_1465 hypothetical protein; hypothetical protein 551188 8322604 Afer_0545 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109179.1 550718 D 525909 CDS YP_003109180.1 256371356 8322608 552385..552618 1 NC_013124.1 hypothetical protein 552618 8322608 Afer_0549 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109180.1 552385 D 525909 CDS YP_003109181.1 256371357 8322609 552745..553074 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 553074 8322609 Afer_0550 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109181.1 552745 D 525909 CDS YP_003109182.1 256371358 8322613 556487..557377 1 NC_013124.1 PFAM: restriction endonuclease; KEGG: ace:Acel_0036 restriction endonuclease; restriction endonuclease 557377 8322613 Afer_0554 Acidimicrobium ferrooxidans DSM 10331 restriction endonuclease YP_003109182.1 556487 D 525909 CDS YP_003109183.1 256371359 8322615 complement(558732..559259) 1 NC_013124.1 PFAM: protein of unknown function DUF1707; KEGG: sco:SCO5045 hypothetical protein; hypothetical protein 559259 8322615 Afer_0556 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109183.1 558732 R 525909 CDS YP_003109184.1 256371360 8322616 complement(559344..561023) 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: fra:Francci3_0309 periplasmic sensor signal transduction histidine kinase; histidine kinase 561023 8322616 Afer_0557 Acidimicrobium ferrooxidans DSM 10331 histidine kinase YP_003109184.1 559344 R 525909 CDS YP_003109185.1 256371361 8322617 complement(561004..561717) 1 NC_013124.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: kra:Krad_3036 two component transcriptional regulator; winged helix family two component transcriptional regulator 561717 8322617 Afer_0558 Acidimicrobium ferrooxidans DSM 10331 winged helix family two component transcriptional regulator YP_003109185.1 561004 R 525909 CDS YP_003109186.1 256371362 8322618 complement(561769..563232) 1 NC_013124.1 PFAM: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: ace:Acel_1716 peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain-containing protein 563232 8322618 Afer_0559 Acidimicrobium ferrooxidans DSM 10331 PDZ/DHR/GLGF domain-containing protein YP_003109186.1 561769 R 525909 CDS YP_003109187.1 256371363 8322619 complement(563311..564051) 1 NC_013124.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dge:Dgeo_0145 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 564051 8322619 Afer_0560 Acidimicrobium ferrooxidans DSM 10331 enoyl-CoA hydratase/isomerase YP_003109187.1 563311 R 525909 CDS YP_003109188.1 256371364 8322620 564139..565320 1 NC_013124.1 PFAM: SufBD protein; KEGG: rxy:Rxyl_0168 iron-regulated ABC transporter permease protein SufD; SufBD protein 565320 8322620 Afer_0561 Acidimicrobium ferrooxidans DSM 10331 SufBD protein YP_003109188.1 564139 D 525909 CDS YP_003109189.1 256371365 8322621 565308..565628 1 NC_013124.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: sgr:SGR_5597 ferredoxin subunit of phenylpropionate dioxygenase; Rieske (2Fe-2S) domain-containing protein 565628 8322621 Afer_0562 Acidimicrobium ferrooxidans DSM 10331 Rieske (2Fe-2S) domain-containing protein YP_003109189.1 565308 D 525909 CDS YP_003109190.1 256371366 8322622 565625..566374 1 NC_013124.1 KEGG: rce:RC1_0492 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 566374 8322622 Afer_0563 Acidimicrobium ferrooxidans DSM 10331 FeS assembly ATPase SufC YP_003109190.1 565625 D 525909 CDS YP_003109191.1 256371367 8322623 complement(566367..567485) 1 NC_013124.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV_1609 ferredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 567485 8322623 Afer_0564 Acidimicrobium ferrooxidans DSM 10331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003109191.1 566367 R 525909 CDS YP_003109192.1 256371368 8322624 complement(567500..567691) 1 NC_013124.1 KEGG: mjl:Mjls_0441 ferredoxin (3Fe-4S); ferredoxin (3Fe-4S) 567691 8322624 Afer_0565 Acidimicrobium ferrooxidans DSM 10331 ferredoxin (3Fe-4S) YP_003109192.1 567500 R 525909 CDS YP_003109193.1 256371369 8322625 567810..568571 1 NC_013124.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: rxy:Rxyl_0171 FeS assembly ATPase SufC; FeS assembly ATPase SufC 568571 8322625 Afer_0566 Acidimicrobium ferrooxidans DSM 10331 FeS assembly ATPase SufC YP_003109193.1 567810 D 525909 CDS YP_003109194.1 256371370 8322626 568568..569818 1 NC_013124.1 KEGG: ace:Acel_1138 SufS subfamily cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SufS subfamily cysteine desulfurase 569818 8322626 Afer_0567 Acidimicrobium ferrooxidans DSM 10331 SufS subfamily cysteine desulfurase YP_003109194.1 568568 D 525909 CDS YP_003109195.1 256371371 8322627 569827..570288 1 NC_013124.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: tth:TTC1374 IscU protein; SUF system FeS assembly protein, NifU family 570288 8322627 Afer_0568 Acidimicrobium ferrooxidans DSM 10331 SUF system FeS assembly protein, NifU family YP_003109195.1 569827 D 525909 CDS YP_003109196.1 256371372 8322628 complement(570742..571362) 1 NC_013124.1 hypothetical protein 571362 8322628 Afer_0569 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109196.1 570742 R 525909 CDS YP_003109197.1 256371373 8322629 complement(572014..573825) 1 NC_013124.1 KEGG: rrs:RoseRS_4277 Ig domain-containing protein; hypothetical protein 573825 8322629 Afer_0570 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109197.1 572014 R 525909 CDS YP_003109198.1 256371374 8322630 574304..575689 1 NC_013124.1 PFAM: ATPase; KEGG: sen:SACE_7308 hypothetical protein; ATPase 575689 8322630 Afer_0571 Acidimicrobium ferrooxidans DSM 10331 ATPase YP_003109198.1 574304 D 525909 CDS YP_003109199.1 256371375 8322631 575805..576959 1 NC_013124.1 KEGG: rha:RHA1_ro03229 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; glycerate kinase 576959 8322631 Afer_0572 Acidimicrobium ferrooxidans DSM 10331 glycerate kinase YP_003109199.1 575805 D 525909 CDS YP_003109200.1 256371376 8322632 complement(576984..578414) 1 NC_013124.1 PFAM: Aldehyde Dehydrogenase; KEGG: ace:Acel_1285 aldehyde dehydrogenase; aldehyde dehydrogenase 578414 8322632 Afer_0573 Acidimicrobium ferrooxidans DSM 10331 aldehyde dehydrogenase YP_003109200.1 576984 R 525909 CDS YP_003109201.1 256371377 8322633 578672..579226 1 NC_013124.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: sgr:SGR_1846 AsnC family transcriptional regulator; AsnC family transcriptional regulator 579226 8322633 Afer_0574 Acidimicrobium ferrooxidans DSM 10331 AsnC family transcriptional regulator YP_003109201.1 578672 D 525909 CDS YP_003109202.1 256371378 8322634 579326..580690 1 NC_013124.1 PFAM: aminotransferase class-III; KEGG: ace:Acel_1287 hypothetical protein; hypothetical protein 580690 8322634 Afer_0575 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109202.1 579326 D 525909 CDS YP_003109203.1 256371379 8322635 580736..582745 1 NC_013124.1 PFAM: TrwC relaxase; KEGG: fal:FRAAL6333 conjugal transfer protein TraA; TrwC relaxase 582745 8322635 Afer_0576 Acidimicrobium ferrooxidans DSM 10331 TrwC relaxase YP_003109203.1 580736 D 525909 CDS YP_003109204.1 256371380 8322636 582820..583704 1 NC_013124.1 KEGG: oih:OB1441 hypothetical protein; hypothetical protein 583704 8322636 Afer_0577 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109204.1 582820 D 525909 CDS YP_003109205.1 256371381 8322637 583734..585563 1 NC_013124.1 TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: fra:Francci3_3865 GTP-binding protein TypA; GTP-binding protein TypA 585563 8322637 Afer_0578 Acidimicrobium ferrooxidans DSM 10331 GTP-binding protein TypA YP_003109205.1 583734 D 525909 CDS YP_003109206.1 256371382 8322638 complement(585531..585881) 1 NC_013124.1 hypothetical protein 585881 8322638 Afer_0579 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109206.1 585531 R 525909 CDS YP_003109207.1 256371383 8322639 complement(585868..586857) 1 NC_013124.1 PFAM: conserved hypothetical protein; KEGG: fal:FRAAL0333 hypothetical protein; hypothetical protein 586857 8322639 Afer_0580 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109207.1 585868 R 525909 CDS YP_003109208.1 256371384 8322640 586907..588148 1 NC_013124.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: stp:Strop_3418 amine oxidase; amine oxidase 588148 8322640 Afer_0581 Acidimicrobium ferrooxidans DSM 10331 amine oxidase YP_003109208.1 586907 D 525909 CDS YP_003109209.1 256371385 8322641 588145..589488 1 NC_013124.1 PFAM: carboxyl transferase; KEGG: saq:Sare_0802 carboxyl transferase; carboxyl transferase 589488 8322641 Afer_0582 Acidimicrobium ferrooxidans DSM 10331 carboxyl transferase YP_003109209.1 588145 D 525909 CDS YP_003109210.1 256371386 8322642 589495..591291 1 NC_013124.1 KEGG: art:Arth_2181 transcriptional regulator-like protein; hypothetical protein 591291 8322642 Afer_0583 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109210.1 589495 D 525909 CDS YP_003109211.1 256371387 8322643 591281..591706 1 NC_013124.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: nfa:nfa31580 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN- binding protein 591706 8322643 Afer_0584 Acidimicrobium ferrooxidans DSM 10331 pyridoxamine 5'-phosphate oxidase-like FMN- binding protein YP_003109211.1 591281 D 525909 CDS YP_003109212.1 256371388 8322644 591747..592289 1 NC_013124.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sma:SAP1p77 MarR family transcriptional regulator; MarR family transcriptional regulator 592289 8322644 Afer_0585 Acidimicrobium ferrooxidans DSM 10331 MarR family transcriptional regulator YP_003109212.1 591747 D 525909 CDS YP_003109213.1 256371389 8322645 592449..594785 1 NC_013124.1 PFAM: MMPL domain protein; KEGG: sco:SCO5084 hypothetical protein; MMPL domain-containing protein 594785 8322645 Afer_0586 Acidimicrobium ferrooxidans DSM 10331 MMPL domain-containing protein YP_003109213.1 592449 D 525909 CDS YP_003109214.1 256371390 8322646 594796..595593 1 NC_013124.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_2620 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 595593 8322646 Afer_0587 Acidimicrobium ferrooxidans DSM 10331 enoyl-CoA hydratase/isomerase YP_003109214.1 594796 D 525909 CDS YP_003109215.1 256371391 8322647 595607..597154 1 NC_013124.1 PFAM: AMP-dependent synthetase and ligase; KEGG: fra:Francci3_2165 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 597154 8322647 Afer_0588 Acidimicrobium ferrooxidans DSM 10331 AMP-dependent synthetase and ligase YP_003109215.1 595607 D 525909 CDS YP_003109216.1 256371392 8322648 complement(597151..597948) 1 NC_013124.1 PFAM: LmbE family protein; KEGG: rca:Rcas_1145 LmbE family protein; LmbE family protein 597948 8322648 Afer_0589 Acidimicrobium ferrooxidans DSM 10331 LmbE family protein YP_003109216.1 597151 R 525909 CDS YP_003109217.1 256371393 8322649 complement(597945..598565) 1 NC_013124.1 PFAM: protein of unknown function DUF121; KEGG: nfa:nfa42070 hypothetical protein; hypothetical protein 598565 8322649 Afer_0590 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109217.1 597945 R 525909 CDS YP_003109218.1 256371394 8322650 598595..599197 1 NC_013124.1 PFAM: ribonuclease HII/HIII; KEGG: hha:Hhal_1454 ribonuclease H; Ribonuclease H 599197 8322650 Afer_0591 Acidimicrobium ferrooxidans DSM 10331 Ribonuclease H YP_003109218.1 598595 D 525909 CDS YP_003109219.1 256371395 8322651 599995..600897 1 NC_013124.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: fal:FRAAL1392 hypothetical protein; hypothetical protein 600897 8322651 Afer_0592 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109219.1 599995 D 525909 CDS YP_003109220.1 256371396 8322652 600925..601038 1 NC_013124.1 hypothetical protein 601038 8322652 Afer_0593 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109220.1 600925 D 525909 CDS YP_003109221.1 256371397 8322653 complement(601035..601829) 1 NC_013124.1 hypothetical protein 601829 8322653 Afer_0594 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109221.1 601035 R 525909 CDS YP_003109222.1 256371398 8322654 complement(601924..602163) 1 NC_013124.1 hypothetical protein 602163 8322654 Afer_0595 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109222.1 601924 R 525909 CDS YP_003109223.1 256371399 8322655 602409..602633 1 NC_013124.1 hypothetical protein 602633 8322655 Afer_0596 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109223.1 602409 D 525909 CDS YP_003109224.1 256371400 8322656 602630..603475 1 NC_013124.1 PFAM: alpha/beta hydrolase fold; KEGG: sru:SRU_2341 alpha/beta fold family hydrolase; alpha/beta hydrolase fold protein 603475 8322656 Afer_0597 Acidimicrobium ferrooxidans DSM 10331 alpha/beta hydrolase fold protein YP_003109224.1 602630 D 525909 CDS YP_003109225.1 256371401 8322657 603468..605048 1 NC_013124.1 PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: sru:SRU_2342 Mur ligase family protein; Mur ligase middle domain-containing protein 605048 8322657 Afer_0598 Acidimicrobium ferrooxidans DSM 10331 Mur ligase middle domain-containing protein YP_003109225.1 603468 D 525909 CDS YP_003109226.1 256371402 8322658 605094..606203 1 NC_013124.1 PFAM: D-alanine--D-alanine ligase domain protein; KEGG: sru:SRU_2197 D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 606203 8322658 Afer_0599 Acidimicrobium ferrooxidans DSM 10331 D-alanine--D-alanine ligase YP_003109226.1 605094 D 525909 CDS YP_003109227.1 256371403 8322659 606241..606939 1 NC_013124.1 PFAM: membrane-flanked domain; KEGG: hau:Haur_2709 membrane-flanked domain- containing protein; membrane-flanked domain-containing protein 606939 8322659 Afer_0600 Acidimicrobium ferrooxidans DSM 10331 membrane-flanked domain-containing protein YP_003109227.1 606241 D 525909 CDS YP_003109228.1 256371404 8322660 606936..607736 1 NC_013124.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: esa:ESA_03129 hypothetical protein; type 11 methyltransferase 607736 8322660 Afer_0601 Acidimicrobium ferrooxidans DSM 10331 type 11 methyltransferase YP_003109228.1 606936 D 525909 CDS YP_003109229.1 256371405 8322661 607720..608490 1 NC_013124.1 PFAM: alpha/beta hydrolase fold; KEGG: fra:Francci3_3910 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 608490 8322661 Afer_0602 Acidimicrobium ferrooxidans DSM 10331 alpha/beta hydrolase fold protein YP_003109229.1 607720 D 525909 CDS YP_003109230.1 256371406 8322662 608487..609608 1 NC_013124.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mav:MAV_1284 Mcr protein; L-carnitine dehydratase/bile acid-inducible protein F 609608 8322662 Afer_0603 Acidimicrobium ferrooxidans DSM 10331 L-carnitine dehydratase/bile acid-inducible protein F YP_003109230.1 608487 D 525909 CDS YP_003109231.1 256371407 8322663 609610..610809 1 NC_013124.1 KEGG: fra:Francci3_2361 hypothetical protein; hypothetical protein 610809 8322663 Afer_0604 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109231.1 609610 D 525909 CDS YP_003109232.1 256371408 8322664 610869..611849 1 NC_013124.1 PFAM: Ion transport 2 domain protein ; TrkA-N domain protein; KEGG: sru:SRU_0409 potassium channel; Ion transport 2 domain-containing protein 611849 8322664 Afer_0605 Acidimicrobium ferrooxidans DSM 10331 Ion transport 2 domain-containing protein YP_003109232.1 610869 D 525909 CDS YP_003109233.1 256371409 8322665 complement(611816..613477) 1 NC_013124.1 KEGG: fra:Francci3_2206 hypothetical protein; hypothetical protein 613477 8322665 Afer_0606 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109233.1 611816 R 525909 CDS YP_003109234.1 256371410 8322666 complement(613545..614225) 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: art:Arth_1175 GCN5-related N- acetyltransferase; GCN5-like N-acetyltransferase 614225 8322666 Afer_0607 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003109234.1 613545 R 525909 CDS YP_003109235.1 256371411 8322667 614273..614986 1 NC_013124.1 PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: mta:Moth_2164 peptidase C26; peptidase C26 614986 8322667 Afer_0608 Acidimicrobium ferrooxidans DSM 10331 peptidase C26 YP_003109235.1 614273 D 525909 CDS YP_003109236.1 256371412 8322668 614983..615732 1 NC_013124.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tbd:Tbd_0690 HAD family hydrolase; HAD-superfamily hydrolase 615732 8322668 Afer_0609 Acidimicrobium ferrooxidans DSM 10331 HAD-superfamily hydrolase YP_003109236.1 614983 D 525909 CDS YP_003109237.1 256371413 8322669 615856..616260 1 NC_013124.1 PFAM: peptidase S24 and S26 domain protein; KEGG: sde:Sde_2043 folylpolyglutamate synthetase; phage repressor 616260 8322669 Afer_0610 Acidimicrobium ferrooxidans DSM 10331 phage repressor YP_003109237.1 615856 D 525909 CDS YP_003109238.1 256371414 8322670 complement(616591..616956) 1 NC_013124.1 KEGG: mpo:Mpop_0738 hypothetical protein; hypothetical protein 616956 8322670 Afer_0611 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109238.1 616591 R 525909 CDS YP_003109239.1 256371415 8322671 complement(616953..619400) 1 NC_013124.1 PFAM: peptidase S45 penicillin amidase; KEGG: tac:Ta1462 penicillin amidase precursor related protein; peptidase S45 penicillin amidase 619400 8322671 Afer_0612 Acidimicrobium ferrooxidans DSM 10331 peptidase S45 penicillin amidase YP_003109239.1 616953 R 525909 CDS YP_003109240.1 256371416 8322672 complement(619456..619830) 1 NC_013124.1 KEGG: cti:RALTA_B0059 conserved hypothetical protein; exported protein; contains cristalline beta-sheet repeat similar to EBV nuclear antigen 1 (EBNA- 1) and fibroin; hypothetical protein 619830 8322672 Afer_0613 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109240.1 619456 R 525909 CDS YP_003109241.1 256371417 8322673 619887..620657 1 NC_013124.1 KEGG: pap:PSPA7_5451 hypothetical protein; hypothetical protein 620657 8322673 Afer_0614 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109241.1 619887 D 525909 CDS YP_003109242.1 256371418 8322674 620658..621488 1 NC_013124.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: kra:Krad_0255 HAD family hydrolase; HAD-superfamily hydrolase 621488 8322674 Afer_0615 Acidimicrobium ferrooxidans DSM 10331 HAD-superfamily hydrolase YP_003109242.1 620658 D 525909 CDS YP_003109243.1 256371419 8322675 621516..622175 1 NC_013124.1 hypothetical protein 622175 8322675 Afer_0616 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109243.1 621516 D 525909 CDS YP_003109244.1 256371420 8322676 622196..622969 1 NC_013124.1 PFAM: inositol monophosphatase; KEGG: mth:MTH871 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; inositol monophosphatase 622969 8322676 Afer_0617 Acidimicrobium ferrooxidans DSM 10331 inositol monophosphatase YP_003109244.1 622196 D 525909 CDS YP_003109245.1 256371421 8322677 622966..623433 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: afw:Anae109_1562 GCN5-related N- acetyltransferase; GCN5-like N-acetyltransferase 623433 8322677 Afer_0618 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003109245.1 622966 D 525909 CDS YP_003109246.1 256371422 8322678 complement(624057..625013) 1 NC_013124.1 KEGG: maq:Maqu_0232 hypothetical protein; hypothetical protein 625013 8322678 Afer_0619 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109246.1 624057 R 525909 CDS YP_003109247.1 256371423 8322679 625457..626605 1 NC_013124.1 KEGG: mem:Memar_0869 hypothetical protein; hypothetical protein 626605 8322679 Afer_0620 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109247.1 625457 D 525909 CDS YP_003109248.1 256371424 8322681 complement(626952..627884) 1 NC_013124.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: lpl:lp_2959 transport protein; hypothetical protein 627884 8322681 Afer_0621 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109248.1 626952 R 525909 CDS YP_003109249.1 256371425 8322682 627962..629344 1 NC_013124.1 PFAM: malic protein NAD-binding; amino acid-binding ACT domain protein; malic protein domain protein; KEGG: nca:Noca_0113 malate dehydrogenase; Malate dehydrogenase 629344 8322682 Afer_0622 Acidimicrobium ferrooxidans DSM 10331 Malate dehydrogenase YP_003109249.1 627962 D 525909 CDS YP_003109250.1 256371426 8322683 complement(629331..630053) 1 NC_013124.1 KEGG: SILV; silver homolog (mouse); hypothetical protein 630053 8322683 Afer_0623 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109250.1 629331 R 525909 CDS YP_003109251.1 256371427 8322684 630128..631126 1 NC_013124.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sew:SeSA_A4159 tyrosine recombinase XerC; integrase family protein 631126 8322684 Afer_0624 Acidimicrobium ferrooxidans DSM 10331 integrase family protein YP_003109251.1 630128 D 525909 CDS YP_003109252.1 256371428 8322685 631123..631887 1 NC_013124.1 KEGG: ace:Acel_1546 RNA polymerase sigma factor WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 3 domain protein; RNA polymerase sigma-28 subunit FliA/WhiG 631887 8322685 Afer_0625 Acidimicrobium ferrooxidans DSM 10331 RNA polymerase sigma-28 subunit FliA/WhiG YP_003109252.1 631123 D 525909 CDS YP_003109253.1 256371429 8322686 632016..632729 1 NC_013124.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: msm:MSMEG_2519 ribosomal protein S2; 30S ribosomal protein S2 632729 8322686 Afer_0626 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S2 YP_003109253.1 632016 D 525909 CDS YP_003109254.1 256371430 8322687 632762..633553 1 NC_013124.1 TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerization; ubiquitin-associated- domain-containing protein; KEGG: ace:Acel_1541 elongation factor Ts; translation elongation factor Ts 633553 8322687 Afer_0627 Acidimicrobium ferrooxidans DSM 10331 translation elongation factor Ts YP_003109254.1 632762 D 525909 CDS YP_003109255.1 256371431 8322688 633556..634275 1 NC_013124.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: hypothetical protein; K09903 uridylate kinase; uridylate kinase 634275 8322688 Afer_0628 Acidimicrobium ferrooxidans DSM 10331 uridylate kinase YP_003109255.1 633556 D 525909 CDS YP_003109256.1 256371432 8322689 634275..634847 1 NC_013124.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: ace:Acel_1539 ribosome recycling factor; ribosome recycling factor 634847 8322689 Afer_0629 Acidimicrobium ferrooxidans DSM 10331 ribosome recycling factor YP_003109256.1 634275 D 525909 CDS YP_003109257.1 256371433 8322690 634856..636283 1 NC_013124.1 PFAM: phosphatidate cytidylyltransferase; KEGG: sth:STH1497 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 636283 8322690 Afer_0630 Acidimicrobium ferrooxidans DSM 10331 phosphatidate cytidylyltransferase YP_003109257.1 634856 D 525909 CDS YP_003109258.1 256371434 8322691 636303..637460 1 NC_013124.1 KEGG: dau:Daud_0615 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 637460 8322691 Afer_0631 Acidimicrobium ferrooxidans DSM 10331 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003109258.1 636303 D 525909 CDS YP_003109259.1 256371435 8322692 637453..638739 1 NC_013124.1 PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: ace:Acel_1523 peptidase M50; peptidase M50 638739 8322692 Afer_0632 Acidimicrobium ferrooxidans DSM 10331 peptidase M50 YP_003109259.1 637453 D 525909 CDS YP_003109260.1 256371436 8322693 638754..639941 1 NC_013124.1 KEGG: ace:Acel_1522 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 639941 8322693 Afer_0633 Acidimicrobium ferrooxidans DSM 10331 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_003109260.1 638754 D 525909 CDS YP_003109261.1 256371437 8322694 639953..641671 1 NC_013124.1 KEGG: mta:Moth_1044 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon- binding domain protein; prolyl-tRNA synthetase 641671 8322694 Afer_0634 Acidimicrobium ferrooxidans DSM 10331 prolyl-tRNA synthetase YP_003109261.1 639953 D 525909 CDS YP_003109262.1 256371438 8322695 641774..642253 1 NC_013124.1 KEGG: maq:Maqu_3350 hypothetical protein; hypothetical protein 642253 8322695 Afer_0635 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109262.1 641774 D 525909 CDS YP_003109263.1 256371439 8322696 642243..643235 1 NC_013124.1 KEGG: hmo:HM1_2310 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; NusA antitermination factor 643235 8322696 Afer_0636 Acidimicrobium ferrooxidans DSM 10331 NusA antitermination factor YP_003109263.1 642243 D 525909 CDS YP_003109264.1 256371440 8322697 643298..643510 1 NC_013124.1 KEGG: pmj:P9211_16151 nucleic-acid-binding protein implicated in transcription termination; hypothetical protein 643510 8322697 Afer_0637 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109264.1 643298 D 525909 CDS YP_003109265.1 256371441 8322698 643567..646224 1 NC_013124.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; GTP-binding protein HSR1-related; translation initiation factor IF-2 domain protein; KEGG: ace:Acel_1515 translation initiation factor IF-2; translation initiation factor IF-2 646224 8322698 Afer_0638 Acidimicrobium ferrooxidans DSM 10331 translation initiation factor IF-2 YP_003109265.1 643567 D 525909 CDS YP_003109266.1 256371442 8322699 646227..646610 1 NC_013124.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: csa:Csal_3073 ribosome-binding factor A; ribosome-binding factor A 646610 8322699 Afer_0639 Acidimicrobium ferrooxidans DSM 10331 ribosome-binding factor A YP_003109266.1 646227 D 525909 CDS YP_003109267.1 256371443 8322700 646582..647478 1 NC_013124.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: ace:Acel_1512 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 647478 8322700 Afer_0640 Acidimicrobium ferrooxidans DSM 10331 tRNA pseudouridine synthase B YP_003109267.1 646582 D 525909 CDS YP_003109268.1 256371444 8322701 647475..648419 1 NC_013124.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; KEGG: lxx:Lxx07280 riboflavin kinase/FMN adenyltransferase; riboflavin biosynthesis protein RibF 648419 8322701 Afer_0641 Acidimicrobium ferrooxidans DSM 10331 riboflavin biosynthesis protein RibF YP_003109268.1 647475 D 525909 CDS YP_003109269.1 256371445 8322702 648497..648754 1 NC_013124.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: cbe:Cbei_1207 30S ribosomal protein S15; 30S ribosomal protein S15 648754 8322702 Afer_0642 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S15 YP_003109269.1 648497 D 525909 CDS YP_003109270.1 256371446 8322703 648815..651193 1 NC_013124.1 KEGG: ace:Acel_1508 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; RNA binding S1 domain protein; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polyribonucleotide nucleotidyltransferase 651193 8322703 Afer_0643 Acidimicrobium ferrooxidans DSM 10331 polyribonucleotide nucleotidyltransferase YP_003109270.1 648815 D 525909 CDS YP_003109271.1 256371447 8322704 651374..652195 1 NC_013124.1 PFAM: inositol monophosphatase; KEGG: stp:Strop_1476 inositol-phosphate phosphatase; Inositol-phosphate phosphatase 652195 8322704 Afer_0644 Acidimicrobium ferrooxidans DSM 10331 Inositol-phosphate phosphatase YP_003109271.1 651374 D 525909 CDS YP_003109272.1 256371448 8322705 652206..653006 1 NC_013124.1 KEGG: hmo:HM1_2327 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 653006 8322705 Afer_0645 Acidimicrobium ferrooxidans DSM 10331 dihydrodipicolinate reductase YP_003109272.1 652206 D 525909 CDS YP_003109273.1 256371449 8322706 653026..653955 1 NC_013124.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: cvi:CV_2048 dihydrodipicolinate synthase; dihydrodipicolinate synthase 653955 8322706 Afer_0646 Acidimicrobium ferrooxidans DSM 10331 dihydrodipicolinate synthase YP_003109273.1 653026 D 525909 CDS YP_003109274.1 256371450 8322707 653942..655597 1 NC_013124.1 PFAM: beta-lactamase domain protein; RNA- metabolising metallo-beta-lactamase; KEGG: swo:Swol_1268 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 655597 8322707 Afer_0647 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase domain-containing protein YP_003109274.1 653942 D 525909 CDS YP_003109275.1 256371451 8322708 655745..657919 1 NC_013124.1 PFAM: cell division FtsK/SpoIIIE; SMART: AAA ATPase; KEGG: ace:Acel_1501 cell division FtsK/SpoIIIE; cell division FtsK/SpoIIIE 657919 8322708 Afer_0648 Acidimicrobium ferrooxidans DSM 10331 cell division FtsK/SpoIIIE YP_003109275.1 655745 D 525909 CDS YP_003109276.1 256371452 8322709 658001..659251 1 NC_013124.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: sco:SCO4439 D-alanyl-D-alanine carboxypeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 659251 8322709 Afer_0649 Acidimicrobium ferrooxidans DSM 10331 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_003109276.1 658001 D 525909 CDS YP_003109277.1 256371453 8322710 659251..660186 1 NC_013124.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mta:Moth_1305 homoserine kinase; Homoserine kinase 660186 8322710 Afer_0650 Acidimicrobium ferrooxidans DSM 10331 Homoserine kinase YP_003109277.1 659251 D 525909 CDS YP_003109278.1 256371454 8322711 660188..660760 1 NC_013124.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mbb:BCG_2762c pgp synthase pgsA3; CDP-alcohol phosphatidyltransferase 660760 8322711 Afer_0651 Acidimicrobium ferrooxidans DSM 10331 CDP-alcohol phosphatidyltransferase YP_003109278.1 660188 D 525909 CDS YP_003109279.1 256371455 8322712 660772..662034 1 NC_013124.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: fal:FRAAL5732 competence-inducible (CinA- like) protein; competence/damage-inducible protein CinA 662034 8322712 Afer_0652 Acidimicrobium ferrooxidans DSM 10331 competence/damage-inducible protein CinA YP_003109279.1 660772 D 525909 CDS YP_003109280.1 256371456 8322713 662101..663141 1 NC_013124.1 KEGG: saq:Sare_1389 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 663141 8322713 Afer_0653 Acidimicrobium ferrooxidans DSM 10331 recA protein YP_003109280.1 662101 D 525909 CDS YP_003109281.1 256371457 8322714 663185..664648 1 NC_013124.1 KEGG: mkm:Mkms_2203 RNA modification enzyme, MiaB family; TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 664648 8322714 Afer_0654 Acidimicrobium ferrooxidans DSM 10331 MiaB family RNA modification protein YP_003109281.1 663185 D 525909 CDS YP_003109282.1 256371458 8322715 complement(664588..665721) 1 NC_013124.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: gtn:GTNG_0815 N-acylamino acid racemase; Mandelate racemase/muconate lactonizing protein 665721 8322715 Afer_0655 Acidimicrobium ferrooxidans DSM 10331 Mandelate racemase/muconate lactonizing protein YP_003109282.1 664588 R 525909 CDS YP_003109283.1 256371459 8322716 665735..666667 1 NC_013124.1 PFAM: tRNA isopentenyltransferase; KEGG: blj:BLD_0277 tRNA delta-2-isopentenyl pyrophosphate transferase; tRNA isopentenyltransferase 666667 8322716 Afer_0656 Acidimicrobium ferrooxidans DSM 10331 tRNA isopentenyltransferase YP_003109283.1 665735 D 525909 CDS YP_003109284.1 256371460 8322717 666664..667428 1 NC_013124.1 KEGG: msm:MSMEG_2735 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 667428 8322717 Afer_0657 Acidimicrobium ferrooxidans DSM 10331 diaminopimelate epimerase YP_003109284.1 666664 D 525909 CDS YP_003109285.1 256371461 8322718 667425..668702 1 NC_013124.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: pth:PTH_2120 GTPase; GTP-binding proten HflX 668702 8322718 Afer_0658 Acidimicrobium ferrooxidans DSM 10331 GTP-binding proten HflX YP_003109285.1 667425 D 525909 CDS YP_003109286.1 256371462 8322719 668707..669792 1 NC_013124.1 PFAM: aminotransferase class I and II; KEGG: fre:Franean1_0872 N-succinyldiaminopimelate aminotransferase; class I and II aminotransferase 669792 8322719 Afer_0659 Acidimicrobium ferrooxidans DSM 10331 class I and II aminotransferase YP_003109286.1 668707 D 525909 CDS YP_003109287.1 256371463 8322720 669789..670604 1 NC_013124.1 KEGG: ace:Acel_1844 2,3,4,5-tetrahydropyridine-2- carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-su ccinyltransferase 670604 8322720 Afer_0660 Acidimicrobium ferrooxidans DSM 10331 2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-su ccinyltransferase YP_003109287.1 669789 D 525909 CDS YP_003109288.1 256371464 8322721 670601..671635 1 NC_013124.1 PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: tfu:Tfu_0495 dipeptidase; peptidase M20 671635 8322721 Afer_0661 Acidimicrobium ferrooxidans DSM 10331 peptidase M20 YP_003109288.1 670601 D 525909 CDS YP_003109289.1 256371465 8322722 complement(671886..672755) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_5060 integrase catalytic subunit; integrase catalytic subunit 672755 8322722 Afer_0662 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109289.1 671886 R 525909 CDS YP_003109290.1 256371466 8322723 complement(672755..673075) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 673075 8322723 Afer_0663 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109290.1 672755 R 525909 CDS YP_003109291.1 256371467 8322724 674017..674343 1 NC_013124.1 KEGG: chy:CHY_1117 ISChy4, transposase; ISChy4, transposase 674343 8322724 Afer_0664 Acidimicrobium ferrooxidans DSM 10331 ISChy4, transposase YP_003109291.1 674017 D 525909 CDS YP_003109292.1 256371468 8322725 complement(675023..676024) 1 NC_013124.1 PFAM: NMT1/THI5 like domain protein; KEGG: rpc:RPC_0844 ABC transporter substrate- binding protein; NMT1/THI5 like domain-containing protein 676024 8322725 Afer_0665 Acidimicrobium ferrooxidans DSM 10331 NMT1/THI5 like domain-containing protein YP_003109292.1 675023 R 525909 CDS YP_003109293.1 256371469 8322726 complement(676056..676871) 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eba:p2A122 taurine transport system permease protein; binding-protein-dependent transport systems inner membrane component 676871 8322726 Afer_0666 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109293.1 676056 R 525909 CDS YP_003109294.1 256371470 8322727 complement(676868..677689) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mem:Memar_0849 ABC transporter-related protein; ABC transporter-like protein 677689 8322727 Afer_0667 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109294.1 676868 R 525909 CDS YP_003109295.1 256371471 8322728 complement(677703..678326) 1 NC_013124.1 KEGG: nfa:nfa38000 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein; SOS-response transcriptional repressor, LexA 678326 8322728 Afer_0668 Acidimicrobium ferrooxidans DSM 10331 SOS-response transcriptional repressor, LexA YP_003109295.1 677703 R 525909 CDS YP_003109296.1 256371472 8322729 678436..678918 1 NC_013124.1 PFAM: ATP-cone domain protein; KEGG: xau:Xaut_4277 ATP-cone domain-containing protein; ATP-cone domain-containing protein 678918 8322729 Afer_0669 Acidimicrobium ferrooxidans DSM 10331 ATP-cone domain-containing protein YP_003109296.1 678436 D 525909 CDS YP_003109297.1 256371473 8322730 678947..679411 1 NC_013124.1 KEGG: tfu:Tfu_0325 hypothetical protein; hypothetical protein 679411 8322730 Afer_0670 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109297.1 678947 D 525909 CDS YP_003109298.1 256371474 8322731 679421..679735 1 NC_013124.1 KEGG: reh:H16_A1148 predicted NADH:ubiquinone oxidoreductase,subunit RnfB; NADH:ubiquinone oxidoreductase,subunit RnfB 679735 8322731 Afer_0671 Acidimicrobium ferrooxidans DSM 10331 NADH:ubiquinone oxidoreductase,subunit RnfB YP_003109298.1 679421 D 525909 CDS YP_003109299.1 256371475 8322732 680268..680867 1 NC_013124.1 KEGG: fra:Francci3_0169 kelch repeat-containing protein; hypothetical protein 680867 8322732 Afer_0672 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109299.1 680268 D 525909 CDS YP_003109300.1 256371476 8322733 complement(681103..681972) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_5060 integrase catalytic subunit; integrase catalytic subunit 681972 8322733 Afer_0673 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109300.1 681103 R 525909 CDS YP_003109301.1 256371477 8322734 complement(681972..682292) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 682292 8322734 Afer_0674 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109301.1 681972 R 525909 CDS YP_003109302.1 256371478 8322736 complement(682871..683311) 1 NC_013124.1 PFAM: PilT protein domain protein; KEGG: mtf:TBFG_10560 hypothetical protein; PilT protein domain-containing protein 683311 8322736 Afer_0676 Acidimicrobium ferrooxidans DSM 10331 PilT protein domain-containing protein YP_003109302.1 682871 R 525909 CDS YP_003109303.1 256371479 8322738 complement(683886..684215) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 684215 8322738 Afer_0678 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109303.1 683886 R 525909 CDS YP_003109304.1 256371480 8322739 684428..685435 1 NC_013124.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: afw:Anae109_3740 threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase 685435 8322739 Afer_0679 Acidimicrobium ferrooxidans DSM 10331 aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003109304.1 684428 D 525909 CDS YP_003109305.1 256371481 8322740 685452..686156 1 NC_013124.1 PFAM: LmbE family protein; KEGG: cau:Caur_0355 LmbE family protein; LmbE family protein 686156 8322740 Afer_0680 Acidimicrobium ferrooxidans DSM 10331 LmbE family protein YP_003109305.1 685452 D 525909 CDS YP_003109306.1 256371482 8322741 686168..686548 1 NC_013124.1 KEGG: afw:Anae109_0918 TfuA domain-containing protein; hypothetical protein 686548 8322741 Afer_0681 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109306.1 686168 D 525909 CDS YP_003109307.1 256371483 8322742 686663..687019 1 NC_013124.1 KEGG: fra:Francci3_1402 hypothetical protein; hypothetical protein 687019 8322742 Afer_0682 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109307.1 686663 D 525909 CDS YP_003109308.1 256371484 8322743 687016..687258 1 NC_013124.1 hypothetical protein 687258 8322743 Afer_0683 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109308.1 687016 D 525909 CDS YP_003109309.1 256371485 8322744 687301..687900 1 NC_013124.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sgr:SGR_4876 endonuclease; HNH endonuclease 687900 8322744 Afer_0684 Acidimicrobium ferrooxidans DSM 10331 HNH endonuclease YP_003109309.1 687301 D 525909 CDS YP_003109310.1 256371486 8322745 688423..688866 1 NC_013124.1 KEGG: rpa:RPA4458 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 688866 8322745 Afer_0685 Acidimicrobium ferrooxidans DSM 10331 isoprenylcysteine carboxyl methyltransferase YP_003109310.1 688423 D 525909 CDS YP_003109311.1 256371487 8322746 complement(688818..689579) 1 NC_013124.1 TIGRFAM: conserved hypothetical protein; KEGG: afw:Anae109_3061 hypothetical protein; hypothetical protein 689579 8322746 Afer_0686 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109311.1 688818 R 525909 CDS YP_003109312.1 256371488 8322747 complement(689866..690744) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: rha:RHA1_ro11026 transposase; integrase catalytic subunit 690744 8322747 Afer_0687 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109312.1 689866 R 525909 CDS YP_003109313.1 256371489 8322750 692423..692743 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 692743 8322750 Afer_0690 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109313.1 692423 D 525909 CDS YP_003109314.1 256371490 8322751 692743..693612 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_5060 integrase catalytic subunit; integrase catalytic subunit 693612 8322751 Afer_0691 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109314.1 692743 D 525909 CDS YP_003109315.1 256371491 8322752 complement(693816..694745) 1 NC_013124.1 KEGG: lxx:Lxx09720 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase 694745 8322752 Afer_0692 Acidimicrobium ferrooxidans DSM 10331 thiamine-monophosphate kinase YP_003109315.1 693816 R 525909 CDS YP_003109316.1 256371492 8322753 694852..696648 1 NC_013124.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 696648 8322753 Afer_0693 Acidimicrobium ferrooxidans DSM 10331 phosphoenolpyruvate carboxykinase YP_003109316.1 694852 D 525909 CDS YP_003109317.1 256371493 8322754 complement(696670..697917) 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: ace:Acel_1472 major facilitator transporter; major facilitator superfamily protein 697917 8322754 Afer_0694 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109317.1 696670 R 525909 CDS YP_003109318.1 256371494 8322755 complement(697966..698352) 1 NC_013124.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: fra:Francci3_4252 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN- binding protein 698352 8322755 Afer_0695 Acidimicrobium ferrooxidans DSM 10331 pyridoxamine 5'-phosphate oxidase-like FMN- binding protein YP_003109318.1 697966 R 525909 CDS YP_003109319.1 256371495 8322756 complement(698346..701786) 1 NC_013124.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: ttj:TTHB116 acyl-CoA dehydrogenase, short- chain specific ( AidB protein); acyl-CoA dehydrogenase domain-containing protein 701786 8322756 Afer_0696 Acidimicrobium ferrooxidans DSM 10331 acyl-CoA dehydrogenase domain-containing protein YP_003109319.1 698346 R 525909 CDS YP_003109320.1 256371496 8322757 complement(701780..703354) 1 NC_013124.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bbr:BB0978 gamma-glutamyltranspeptidase precursor; Gamma-glutamyltransferase 703354 8322757 Afer_0697 Acidimicrobium ferrooxidans DSM 10331 Gamma-glutamyltransferase YP_003109320.1 701780 R 525909 CDS YP_003109321.1 256371497 8322758 703638..704693 1 NC_013124.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: gtn:GTNG_2677 alanine dehydrogenase; alanine dehydrogenase/PNT domain-containing protein 704693 8322758 Afer_0698 Acidimicrobium ferrooxidans DSM 10331 alanine dehydrogenase/PNT domain-containing protein YP_003109321.1 703638 D 525909 CDS YP_003109322.1 256371498 8322759 704693..706063 1 NC_013124.1 PFAM: FAD dependent oxidoreductase; KEGG: ace:Acel_1280 FAD dependent oxidoreductase; FAD dependent oxidoreductase 706063 8322759 Afer_0699 Acidimicrobium ferrooxidans DSM 10331 FAD dependent oxidoreductase YP_003109322.1 704693 D 525909 CDS YP_003109323.1 256371499 8322760 706139..707404 1 NC_013124.1 PFAM: aminotransferase class-III; KEGG: rca:Rcas_3219 aminotransferase class-III; class III aminotransferase 707404 8322760 Afer_0700 Acidimicrobium ferrooxidans DSM 10331 class III aminotransferase YP_003109323.1 706139 D 525909 CDS YP_003109324.1 256371500 8322761 complement(707541..708734) 1 NC_013124.1 KEGG: scl:sce3939 hypothetical protein; hypothetical protein 708734 8322761 Afer_0701 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109324.1 707541 R 525909 CDS YP_003109325.1 256371501 8322762 complement(708731..710302) 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: nca:Noca_1614 ATPase domain-containing protein; histidine kinase 710302 8322762 Afer_0702 Acidimicrobium ferrooxidans DSM 10331 histidine kinase YP_003109325.1 708731 R 525909 CDS YP_003109326.1 256371502 8322763 complement(710312..711022) 1 NC_013124.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rha:RHA1_ro08012 response regulator, two- component system; winged helix family two component transcriptional regulator 711022 8322763 Afer_0703 Acidimicrobium ferrooxidans DSM 10331 winged helix family two component transcriptional regulator YP_003109326.1 710312 R 525909 CDS YP_003109327.1 256371503 8322764 complement(711072..711668) 1 NC_013124.1 PFAM: nitroreductase; KEGG: sdn:Sden_2315 nitroreductase; nitroreductase 711668 8322764 Afer_0704 Acidimicrobium ferrooxidans DSM 10331 nitroreductase YP_003109327.1 711072 R 525909 CDS YP_003109328.1 256371504 8322765 complement(711665..712270) 1 NC_013124.1 PFAM: beta-lactamase domain protein; KEGG: sen:SACE_5316 metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 712270 8322765 Afer_0705 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase domain-containing protein YP_003109328.1 711665 R 525909 CDS YP_003109329.1 256371505 8322766 712403..712822 1 NC_013124.1 hypothetical protein 712822 8322766 Afer_0706 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109329.1 712403 D 525909 CDS YP_003109330.1 256371506 8322767 713011..713370 1 NC_013124.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rha:RHA1_ro11235 carboxymuconolactone decarboxylase; alkylhydroperoxidase-like protein 713370 8322767 Afer_0707 Acidimicrobium ferrooxidans DSM 10331 alkylhydroperoxidase-like protein YP_003109330.1 713011 D 525909 CDS YP_003109331.1 256371507 8322768 complement(713352..714143) 1 NC_013124.1 PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; KEGG: mpn:MPN015 hypothetical protein; RimK domain-containing protein ATP-grasp 714143 8322768 Afer_0708 Acidimicrobium ferrooxidans DSM 10331 RimK domain-containing protein ATP-grasp YP_003109331.1 713352 R 525909 CDS YP_003109332.1 256371508 8322769 complement(714140..714979) 1 NC_013124.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; KEGG: oih:OB2059 hypothetical protein; RimK family alpha-L-glutamate ligase 714979 8322769 Afer_0709 Acidimicrobium ferrooxidans DSM 10331 RimK family alpha-L-glutamate ligase YP_003109332.1 714140 R 525909 CDS YP_003109333.1 256371509 8322770 715064..715720 1 NC_013124.1 KEGG: reh:H16_A3625 predicted alpha/beta hydrolase BEM46; hypothetical protein 715720 8322770 Afer_0710 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109333.1 715064 D 525909 CDS YP_003109334.1 256371510 8322771 complement(715717..716412) 1 NC_013124.1 KEGG: ace:Acel_0990 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 716412 8322771 Afer_0711 Acidimicrobium ferrooxidans DSM 10331 thiamine-phosphate pyrophosphorylase YP_003109334.1 715717 R 525909 CDS YP_003109335.1 256371511 8322772 complement(716409..716996) 1 NC_013124.1 TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD family protein; KEGG: sma:SAV_4172 hypothetical protein; HhH-GPD family protein 716996 8322772 Afer_0712 Acidimicrobium ferrooxidans DSM 10331 HhH-GPD family protein YP_003109335.1 716409 R 525909 CDS YP_003109336.1 256371512 8322773 complement(717041..719779) 1 NC_013124.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 719779 aceE 8322773 aceE Acidimicrobium ferrooxidans DSM 10331 pyruvate dehydrogenase subunit E1 YP_003109336.1 717041 R 525909 CDS YP_003109337.1 256371513 8322774 719836..720282 1 NC_013124.1 PFAM: ribonuclease H; KEGG: nca:Noca_0418 ribonuclease H; ribonuclease H 720282 8322774 Afer_0714 Acidimicrobium ferrooxidans DSM 10331 ribonuclease H YP_003109337.1 719836 D 525909 CDS YP_003109338.1 256371514 8322775 720319..721077 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_4664 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 721077 8322775 Afer_0715 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003109338.1 720319 D 525909 CDS YP_003109339.1 256371515 8322776 721122..722042 1 NC_013124.1 PFAM: aldo/keto reductase; KEGG: mpa:MAP3260 hypothetical protein; aldo/keto reductase 722042 8322776 Afer_0716 Acidimicrobium ferrooxidans DSM 10331 aldo/keto reductase YP_003109339.1 721122 D 525909 CDS YP_003109340.1 256371516 8322777 722123..723502 1 NC_013124.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: ace:Acel_0936 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 723502 8322777 Afer_0717 Acidimicrobium ferrooxidans DSM 10331 dihydrolipoamide dehydrogenase YP_003109340.1 722123 D 525909 CDS YP_003109341.1 256371517 8322778 723495..725117 1 NC_013124.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: fre:Franean1_1779 2-oxoglutarate dehydrogenase E2 component; hypothetical protein 725117 8322778 Afer_0718 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109341.1 723495 D 525909 CDS YP_003109342.1 256371518 8322779 725114..726721 1 NC_013124.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 726721 8322779 Afer_0719 Acidimicrobium ferrooxidans DSM 10331 lipoyl synthase YP_003109342.1 725114 D 525909 CDS YP_003109343.1 256371519 8322780 726718..727839 1 NC_013124.1 PFAM: peptidase M24; creatinase; KEGG: sma:SAV_2161 peptidase; peptidase M24 727839 8322780 Afer_0720 Acidimicrobium ferrooxidans DSM 10331 peptidase M24 YP_003109343.1 726718 D 525909 CDS YP_003109344.1 256371520 8322781 727905..729083 1 NC_013124.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: mxa:MXAN_2995 peptidase, S1C (protease Do) subfamily; peptidase S1 and S6 chymotrypsin/Hap 729083 8322781 Afer_0721 Acidimicrobium ferrooxidans DSM 10331 peptidase S1 and S6 chymotrypsin/Hap YP_003109344.1 727905 D 525909 CDS YP_003109345.1 256371521 8322782 complement(729095..729664) 1 NC_013124.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: pzu:PHZ_c3149 hypothetical protein; ATP/cobalamin adenosyltransferase 729664 8322782 Afer_0722 Acidimicrobium ferrooxidans DSM 10331 ATP/cobalamin adenosyltransferase YP_003109345.1 729095 R 525909 CDS YP_003109346.1 256371522 8322783 729699..733154 1 NC_013124.1 TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS; Vitamin B12 dependent methionine synthase activation region; KEGG: saq:Sare_2325 methionine synthase; methionine synthase 733154 8322783 Afer_0723 Acidimicrobium ferrooxidans DSM 10331 methionine synthase YP_003109346.1 729699 D 525909 CDS YP_003109347.1 256371523 8322784 733236..734603 1 NC_013124.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: rba:RB12107 cytosol aminopeptidase; Leucyl aminopeptidase 734603 8322784 Afer_0724 Acidimicrobium ferrooxidans DSM 10331 Leucyl aminopeptidase YP_003109347.1 733236 D 525909 CDS YP_003109348.1 256371524 8322785 complement(734551..735135) 1 NC_013124.1 hypothetical protein 735135 8322785 Afer_0725 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109348.1 734551 R 525909 CDS YP_003109349.1 256371525 8322786 complement(735270..736850) 1 NC_013124.1 KEGG: rxy:Rxyl_1283 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase, large subunit 736850 8322786 Afer_0726 Acidimicrobium ferrooxidans DSM 10331 methylmalonyl-CoA mutase, large subunit YP_003109349.1 735270 R 525909 CDS YP_003109350.1 256371526 8322787 737019..737324 1 NC_013124.1 KEGG: cau:Caur_3165 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 737324 8322787 Afer_0727 Acidimicrobium ferrooxidans DSM 10331 transcriptional coactivator/pterin dehydratase YP_003109350.1 737019 D 525909 CDS YP_003109351.1 256371527 8322788 complement(737364..738530) 1 NC_013124.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 738530 8322788 Afer_0728 Acidimicrobium ferrooxidans DSM 10331 molybdopterin biosynthesis protein MoeB YP_003109351.1 737364 R 525909 CDS YP_003109352.1 256371528 8322789 complement(738533..739195) 1 NC_013124.1 PFAM: nitroreductase; KEGG: kra:Krad_1547 nitroreductase; nitroreductase 739195 8322789 Afer_0729 Acidimicrobium ferrooxidans DSM 10331 nitroreductase YP_003109352.1 738533 R 525909 CDS YP_003109353.1 256371529 8322790 complement(739200..740966) 1 NC_013124.1 PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: kra:Krad_3912 carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthase L chain ATP- binding 740966 8322790 Afer_0730 Acidimicrobium ferrooxidans DSM 10331 carbamoyl-phosphate synthase L chain ATP- binding YP_003109353.1 739200 R 525909 CDS YP_003109354.1 256371530 8322791 741031..741807 1 NC_013124.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: rpb:RPB_3299 biotin--acetyl-CoA-carboxylase ligase; biotin/acetyl-CoA-carboxylase ligase 741807 8322791 Afer_0731 Acidimicrobium ferrooxidans DSM 10331 biotin/acetyl-CoA-carboxylase ligase YP_003109354.1 741031 D 525909 CDS YP_003109355.1 256371531 8322792 741804..742943 1 NC_013124.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: ace:Acel_0405 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 742943 8322792 Afer_0732 Acidimicrobium ferrooxidans DSM 10331 acyl-CoA dehydrogenase domain-containing protein YP_003109355.1 741804 D 525909 CDS YP_003109356.1 256371532 8322793 742973..744040 1 NC_013124.1 TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: fal:FRAAL1228 glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP- glucose pyrophosphorylase) (sugar-nucleotidylation enzyme); glucose-1-phosphate thymidyltransferase 744040 8322793 Afer_0733 Acidimicrobium ferrooxidans DSM 10331 glucose-1-phosphate thymidyltransferase YP_003109356.1 742973 D 525909 CDS YP_003109357.1 256371533 8322794 744117..745124 1 NC_013124.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: fra:Francci3_1669 dTDP-glucose 4,6- dehydratase; dTDP-glucose 4,6-dehydratase 745124 8322794 Afer_0734 Acidimicrobium ferrooxidans DSM 10331 dTDP-glucose 4,6-dehydratase YP_003109357.1 744117 D 525909 CDS YP_003109358.1 256371534 8322795 745121..745981 1 NC_013124.1 KEGG: ace:Acel_0416 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase 745981 8322795 Afer_0735 Acidimicrobium ferrooxidans DSM 10331 dTDP-4-dehydrorhamnose reductase YP_003109358.1 745121 D 525909 CDS YP_003109359.1 256371535 8322796 745974..746819 1 NC_013124.1 KEGG: sen:SACE_6472 dTDP-rhamnosyl transferase; dTDP-rhamnosyl transferase 746819 8322796 Afer_0736 Acidimicrobium ferrooxidans DSM 10331 dTDP-rhamnosyl transferase YP_003109359.1 745974 D 525909 CDS YP_003109360.1 256371536 8322797 746840..747478 1 NC_013124.1 KEGG: similar to nucleoporin 214kDa; hypothetical protein 747478 8322797 Afer_0737 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109360.1 746840 D 525909 CDS YP_003109361.1 256371537 8322798 747517..748557 1 NC_013124.1 PFAM: Nucleotidyl transferase; KEGG: rxy:Rxyl_1624 nucleotidyl transferase; Nucleotidyl transferase 748557 8322798 Afer_0738 Acidimicrobium ferrooxidans DSM 10331 Nucleotidyl transferase YP_003109361.1 747517 D 525909 CDS YP_003109362.1 256371538 8322799 748554..749534 1 NC_013124.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: sth:STH2715 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 749534 8322799 Afer_0739 Acidimicrobium ferrooxidans DSM 10331 NAD-dependent epimerase/dehydratase YP_003109362.1 748554 D 525909 CDS YP_003109363.1 256371539 8322800 complement(749682..750380) 1 NC_013124.1 TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: sco:SCO3037 F420-0--gamma-glutamyl ligase; F420-dependent oxidoreductase 750380 8322800 Afer_0740 Acidimicrobium ferrooxidans DSM 10331 F420-dependent oxidoreductase YP_003109363.1 749682 R 525909 CDS YP_003109364.1 256371540 8322801 complement(750377..751342) 1 NC_013124.1 catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); 2-phospho-L-lactate transferase 751342 8322801 Afer_0741 Acidimicrobium ferrooxidans DSM 10331 2-phospho-L-lactate transferase YP_003109364.1 750377 R 525909 CDS YP_003109365.1 256371541 8322802 751402..752505 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: fre:Franean1_5894 glycosyl transferase group 1; group 1 glycosyl transferase 752505 8322802 Afer_0742 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003109365.1 751402 D 525909 CDS YP_003109366.1 256371542 8322803 752502..753566 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: ace:Acel_0448 glycosyl transferase, group 1; group 1 glycosyl transferase 753566 8322803 Afer_0743 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003109366.1 752502 D 525909 CDS YP_003109367.1 256371543 8322804 753559..754650 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: fra:Francci3_0735 glycosyl transferase, group 1; group 1 glycosyl transferase 754650 8322804 Afer_0744 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003109367.1 753559 D 525909 CDS YP_003109368.1 256371544 8322805 754662..755588 1 NC_013124.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; KEGG: afe:Lferr_2889 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 755588 8322805 Afer_0745 Acidimicrobium ferrooxidans DSM 10331 NAD-dependent epimerase/dehydratase YP_003109368.1 754662 D 525909 CDS YP_003109369.1 256371545 8322806 755601..758456 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: ace:Acel_0460 glycosyl transferase family protein; family 2 glycosyl transferase 758456 8322806 Afer_0746 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003109369.1 755601 D 525909 CDS YP_003109370.1 256371546 8322807 758453..759871 1 NC_013124.1 KEGG: aau:AAur_1312 hypothetical protein; hypothetical protein 759871 8322807 Afer_0747 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109370.1 758453 D 525909 CDS YP_003109371.1 256371547 8322808 complement(759868..760368) 1 NC_013124.1 KEGG: LOC100072155; hypothetical protein LOC100072155; hypothetical protein 760368 8322808 Afer_0748 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109371.1 759868 R 525909 CDS YP_003109372.1 256371548 8322809 complement(760365..761030) 1 NC_013124.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ace:Acel_1375 deaminase-reductase domain- containing protein; bifunctional deaminase-reductase domain-containing protein 761030 8322809 Afer_0749 Acidimicrobium ferrooxidans DSM 10331 bifunctional deaminase-reductase domain-containing protein YP_003109372.1 760365 R 525909 CDS YP_003109373.1 256371549 8322812 763226..764257 1 NC_013124.1 KEGG: sfu:Sfum_1834 hypothetical protein; hypothetical protein 764257 8322812 Afer_0752 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109373.1 763226 D 525909 CDS YP_003109374.1 256371550 8322813 764333..766009 1 NC_013124.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: nca:Noca_2984 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 766009 8322813 Afer_0753 Acidimicrobium ferrooxidans DSM 10331 methyl-accepting chemotaxis sensory transducer YP_003109374.1 764333 D 525909 CDS YP_003109375.1 256371551 8322814 complement(765990..766589) 1 NC_013124.1 PFAM: DSBA oxidoreductase; KEGG: fal:FRAAL2315 hypothetical protein; DSBA oxidoreductase 766589 8322814 Afer_0754 Acidimicrobium ferrooxidans DSM 10331 DSBA oxidoreductase YP_003109375.1 765990 R 525909 CDS YP_003109376.1 256371552 8322815 complement(766645..767064) 1 NC_013124.1 PFAM: NUDIX hydrolase; KEGG: stp:Strop_1261 NUDIX hydrolase; NUDIX hydrolase 767064 8322815 Afer_0755 Acidimicrobium ferrooxidans DSM 10331 NUDIX hydrolase YP_003109376.1 766645 R 525909 CDS YP_003109377.1 256371553 8322816 complement(767057..767629) 1 NC_013124.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: fra:Francci3_3059 phosphoesterase, PA- phosphatase related; PA-phosphatase-like phosphoesterase 767629 8322816 Afer_0756 Acidimicrobium ferrooxidans DSM 10331 PA-phosphatase-like phosphoesterase YP_003109377.1 767057 R 525909 CDS YP_003109378.1 256371554 8322817 complement(767626..768405) 1 NC_013124.1 KEGG: sgr:SGR_5851 hypothetical protein; hypothetical protein 768405 8322817 Afer_0757 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109378.1 767626 R 525909 CDS YP_003109379.1 256371555 8322818 complement(768415..769314) 1 NC_013124.1 PFAM: alpha/beta hydrolase fold; KEGG: predicted protein; alpha/beta hydrolase fold protein 769314 8322818 Afer_0758 Acidimicrobium ferrooxidans DSM 10331 alpha/beta hydrolase fold protein YP_003109379.1 768415 R 525909 CDS YP_003109380.1 256371556 8322819 769322..769930 1 NC_013124.1 PFAM: SNARE associated Golgi protein; KEGG: ank:AnaeK_1303 SNARE associated Golgi protein; hypothetical protein 769930 8322819 Afer_0759 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109380.1 769322 D 525909 CDS YP_003109381.1 256371557 8322822 770477..770869 1 NC_013124.1 PFAM: protein of unknown function DUF156; KEGG: ace:Acel_0543 hypothetical protein; hypothetical protein 770869 8322822 Afer_0760 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109381.1 770477 D 525909 CDS YP_003109382.1 256371558 8322823 770911..772419 1 NC_013124.1 TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein; KEGG: bcl:ABC2637 trigger factor; trigger factor 772419 8322823 Afer_0761 Acidimicrobium ferrooxidans DSM 10331 trigger factor YP_003109382.1 770911 D 525909 CDS YP_003109383.1 256371559 8322824 772430..773044 1 NC_013124.1 PFAM: peptidase S14 ClpP; KEGG: chy:CHY_0325 ATP-dependent Clp protease, proteolytic subunit ClpP; Endopeptidase Clp 773044 8322824 Afer_0762 Acidimicrobium ferrooxidans DSM 10331 Endopeptidase Clp YP_003109383.1 772430 D 525909 CDS YP_003109384.1 256371560 8322825 773122..774381 1 NC_013124.1 KEGG: fre:Franean1_5272 ATP-dependent protease ATP- binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; AAA ATPase central domain protein; SMART: AAA ATPase; ATP-dependent Clp protease, ATP-binding subunit ClpX 774381 8322825 Afer_0763 Acidimicrobium ferrooxidans DSM 10331 ATP-dependent Clp protease, ATP-binding subunit ClpX YP_003109384.1 773122 D 525909 CDS YP_003109385.1 256371561 8322826 774378..775679 1 NC_013124.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: dra:DR_2575 folyl-polyglutamate synthetase; FolC bifunctional protein 775679 8322826 Afer_0764 Acidimicrobium ferrooxidans DSM 10331 FolC bifunctional protein YP_003109385.1 774378 D 525909 CDS YP_003109386.1 256371562 8322827 775694..776104 1 NC_013124.1 KEGG: ace:Acel_0747 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; Nucleoside-diphosphate kinase 776104 8322827 Afer_0765 Acidimicrobium ferrooxidans DSM 10331 Nucleoside-diphosphate kinase YP_003109386.1 775694 D 525909 CDS YP_003109387.1 256371563 8322828 776161..777189 1 NC_013124.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 777189 8322828 Afer_0766 Acidimicrobium ferrooxidans DSM 10331 rod shape-determining protein MreB YP_003109387.1 776161 D 525909 CDS YP_003109388.1 256371564 8322829 777198..778040 1 NC_013124.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: drm:Dred_2547 rod shape-determining protein MreC; rod shape-determining protein MreC 778040 8322829 Afer_0767 Acidimicrobium ferrooxidans DSM 10331 rod shape-determining protein MreC YP_003109388.1 777198 D 525909 CDS YP_003109389.1 256371565 8322830 778037..778540 1 NC_013124.1 TIGRFAM: rod shape-determining protein MreD; KEGG: aoe:Clos_1763 hypothetical protein; rod shape-determining protein MreD 778540 8322830 Afer_0768 Acidimicrobium ferrooxidans DSM 10331 rod shape-determining protein MreD YP_003109389.1 778037 D 525909 CDS YP_003109390.1 256371566 8322831 778627..780561 1 NC_013124.1 KEGG: fre:Franean1_5266 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerization domain; penicillin-binding protein 2 780561 8322831 Afer_0769 Acidimicrobium ferrooxidans DSM 10331 penicillin-binding protein 2 YP_003109390.1 778627 D 525909 CDS YP_003109391.1 256371567 8322832 781317..782690 1 NC_013124.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: tfu:Tfu_2183 ribonuclease E and G; Rne/Rng family ribonuclease 782690 8322832 Afer_0770 Acidimicrobium ferrooxidans DSM 10331 Rne/Rng family ribonuclease YP_003109391.1 781317 D 525909 CDS YP_003109392.1 256371568 8322833 782704..783039 1 NC_013124.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: pac:PPA0827 50S ribosomal protein L21; 50S ribosomal protein L21 783039 8322833 Afer_0771 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L21 YP_003109392.1 782704 D 525909 CDS YP_003109393.1 256371569 8322834 783042..783308 1 NC_013124.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: krh:KRH_11310 50S ribosomal protein L27; 50S ribosomal protein L27 783308 8322834 Afer_0772 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L27 YP_003109393.1 783042 D 525909 CDS YP_003109394.1 256371570 8322835 783322..784590 1 NC_013124.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; KEGG: ace:Acel_0758 GTPase ObgE; GTP-binding protein Obg/CgtA 784590 8322835 Afer_0773 Acidimicrobium ferrooxidans DSM 10331 GTP-binding protein Obg/CgtA YP_003109394.1 783322 D 525909 CDS YP_003109395.1 256371571 8322836 784587..785675 1 NC_013124.1 KEGG: neu:NE1290 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein; glutamate 5-kinase 785675 8322836 Afer_0774 Acidimicrobium ferrooxidans DSM 10331 glutamate 5-kinase YP_003109395.1 784587 D 525909 CDS YP_003109396.1 256371572 8322837 complement(785807..786187) 1 NC_013124.1 KEGG: mse:Msed_0347 hypothetical protein; hypothetical protein 786187 8322837 Afer_0775 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109396.1 785807 R 525909 CDS YP_003109397.1 256371573 8322838 complement(786270..786791) 1 NC_013124.1 PFAM: protein of unknown function DUF664; KEGG: sco:SCO1340 hypothetical protein; hypothetical protein 786791 8322838 Afer_0776 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109397.1 786270 R 525909 CDS YP_003109398.1 256371574 8322839 complement(786934..787659) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_2201 ABC transporter related; ABC transporter-like protein 787659 8322839 Afer_0777 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109398.1 786934 R 525909 CDS YP_003109399.1 256371575 8322840 complement(787634..788350) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_2202 ABC transporter related; ABC transporter-like protein 788350 8322840 Afer_0778 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109399.1 787634 R 525909 CDS YP_003109400.1 256371576 8322841 complement(788337..789347) 1 NC_013124.1 PFAM: inner-membrane translocator; KEGG: acr:Acry_2203 inner-membrane translocator; inner-membrane translocator 789347 8322841 Afer_0779 Acidimicrobium ferrooxidans DSM 10331 inner-membrane translocator YP_003109400.1 788337 R 525909 CDS YP_003109401.1 256371577 8322842 complement(789340..790218) 1 NC_013124.1 PFAM: inner-membrane translocator; KEGG: acr:Acry_2204 inner-membrane translocator; inner-membrane translocator 790218 8322842 Afer_0780 Acidimicrobium ferrooxidans DSM 10331 inner-membrane translocator YP_003109401.1 789340 R 525909 CDS YP_003109402.1 256371578 8322843 complement(790295..791584) 1 NC_013124.1 KEGG: acr:Acry_2205 extracellular ligand-binding receptor; extracellular ligand-binding receptor 791584 8322843 Afer_0781 Acidimicrobium ferrooxidans DSM 10331 extracellular ligand-binding receptor YP_003109402.1 790295 R 525909 CDS YP_003109403.1 256371579 8322844 791924..793201 1 NC_013124.1 TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; KEGG: ace:Acel_0761 gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 793201 8322844 Afer_0782 Acidimicrobium ferrooxidans DSM 10331 gamma-glutamyl phosphate reductase YP_003109403.1 791924 D 525909 CDS YP_003109404.1 256371580 8322845 793227..794078 1 NC_013124.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; KEGG: sma:SAV_1448 MoxR-like ATPase; ATPase 794078 8322845 Afer_0783 Acidimicrobium ferrooxidans DSM 10331 ATPase YP_003109404.1 793227 D 525909 CDS YP_003109405.1 256371581 8322846 794075..795409 1 NC_013124.1 PFAM: VWA containing CoxE family protein; KEGG: fre:Franean1_5254 VWA containing CoxE family protein; VWA containing CoxE family protein 795409 8322846 Afer_0784 Acidimicrobium ferrooxidans DSM 10331 VWA containing CoxE family protein YP_003109405.1 794075 D 525909 CDS YP_003109406.1 256371582 8322847 complement(795514..797391) 1 NC_013124.1 KEGG: cbe:Cbei_2588 collagen triple helix repeat; hypothetical protein 797391 8322847 Afer_0785 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109406.1 795514 R 525909 CDS YP_003109407.1 256371583 8322848 complement(797518..798378) 1 NC_013124.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: fal:FRAAL6170 2-hydroxyhepta-2,4-diene-1,7- dioate isomerase (HhdD isomerase)/5-carboxymethyl-2-oxo- hex-3-ene-1,7-dioate decarboxylase (OPET decarboxylase); 5-carboxymethyl-2-hydroxymuconate delta-isomerase 798378 8322848 Afer_0786 Acidimicrobium ferrooxidans DSM 10331 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_003109407.1 797518 R 525909 CDS YP_003109408.1 256371584 8322849 complement(798417..798770) 1 NC_013124.1 hypothetical protein 798770 8322849 Afer_0787 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109408.1 798417 R 525909 CDS YP_003109409.1 256371585 8322850 798910..799479 1 NC_013124.1 TIGRFAM: yecA family protein; KEGG: cli:Clim_0950 YecA family protein; yecA family protein 799479 8322850 Afer_0788 Acidimicrobium ferrooxidans DSM 10331 yecA family protein YP_003109409.1 798910 D 525909 CDS YP_003109410.1 256371586 8322851 complement(799476..799994) 1 NC_013124.1 PFAM: Iojap-related protein; KEGG: ank:AnaeK_0226 iojap-like protein; Iojap-like protein 799994 8322851 Afer_0789 Acidimicrobium ferrooxidans DSM 10331 Iojap-like protein YP_003109410.1 799476 R 525909 CDS YP_003109411.1 256371587 8322852 complement(800216..800836) 1 NC_013124.1 KEGG: dsy:DSY3161 nicotinic acid mononucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 800836 8322852 Afer_0790 Acidimicrobium ferrooxidans DSM 10331 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_003109411.1 800216 R 525909 CDS YP_003109412.1 256371588 8322853 complement(800836..801759) 1 NC_013124.1 PFAM: Luciferase-like monooxygenase; KEGG: fal:FRAAL2800 hypothetical protein; Luciferase-like monooxygenase 801759 8322853 Afer_0791 Acidimicrobium ferrooxidans DSM 10331 Luciferase-like monooxygenase YP_003109412.1 800836 R 525909 CDS YP_003109413.1 256371589 8322854 801844..803199 1 NC_013124.1 KEGG: ace:Acel_0984 3-deoxy-D-arabinoheptulosonate- 7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase 803199 8322854 Afer_0792 Acidimicrobium ferrooxidans DSM 10331 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003109413.1 801844 D 525909 CDS YP_003109414.1 256371590 8322855 complement(803273..804466) 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: pto:PTO1278 transporter; major facilitator superfamily protein 804466 8322855 Afer_0793 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109414.1 803273 R 525909 CDS YP_003109415.1 256371591 8322856 complement(804528..804899) 1 NC_013124.1 KEGG: mmi:MMAR_0699 hypothetical protein; hypothetical protein 804899 8322856 Afer_0794 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109415.1 804528 R 525909 CDS YP_003109416.1 256371592 8322857 complement(805156..805932) 1 NC_013124.1 hypothetical protein 805932 8322857 Afer_0795 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109416.1 805156 R 525909 CDS YP_003109417.1 256371593 8322859 806430..807950 1 NC_013124.1 KEGG: eba:ebA5742 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 807950 8322859 Afer_0796 Acidimicrobium ferrooxidans DSM 10331 histidine ammonia-lyase YP_003109417.1 806430 D 525909 CDS YP_003109418.1 256371594 8322860 complement(807962..808711) 1 NC_013124.1 PFAM: acyl-ACP thioesterase; KEGG: nfa:nfa20140 hypothetical protein; acyl-ACP thioesterase 808711 8322860 Afer_0797 Acidimicrobium ferrooxidans DSM 10331 acyl-ACP thioesterase YP_003109418.1 807962 R 525909 CDS YP_003109419.1 256371595 8322861 complement(808721..810379) 1 NC_013124.1 PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce5736 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 810379 8322861 Afer_0798 Acidimicrobium ferrooxidans DSM 10331 AMP-dependent synthetase and ligase YP_003109419.1 808721 R 525909 CDS YP_003109420.1 256371596 8322862 complement(810437..811624) 1 NC_013124.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: sco:SCO1858 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 811624 8322862 Afer_0799 Acidimicrobium ferrooxidans DSM 10331 cobalamin (vitamin B12) biosynthesis CbiX protein YP_003109420.1 810437 R 525909 CDS YP_003109421.1 256371597 8322863 complement(811621..812205) 1 NC_013124.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: rxy:Rxyl_0645 precorrin-8X methylmutase; Precorrin-8X methylmutase CbiC/CobH 812205 8322863 Afer_0800 Acidimicrobium ferrooxidans DSM 10331 Precorrin-8X methylmutase CbiC/CobH YP_003109421.1 811621 R 525909 CDS YP_003109422.1 256371598 8322865 complement(812384..814027) 1 NC_013124.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: stp:Strop_2520 precorrin-3B C17- methyltransferase; precorrin-3B C17-methyltransferase 814027 8322865 Afer_0802 Acidimicrobium ferrooxidans DSM 10331 precorrin-3B C17-methyltransferase YP_003109422.1 812384 R 525909 CDS YP_003109423.1 256371599 8322866 814215..815426 1 NC_013124.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: fre:Franean1_3789 fumarylacetoacetase; Fumarylacetoacetase 815426 8322866 Afer_0803 Acidimicrobium ferrooxidans DSM 10331 Fumarylacetoacetase YP_003109423.1 814215 D 525909 CDS YP_003109424.1 256371600 8322867 815481..816002 1 NC_013124.1 KEGG: tth:TT_P0002 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 816002 8322867 Afer_0804 Acidimicrobium ferrooxidans DSM 10331 cob(I)alamin adenosyltransferase YP_003109424.1 815481 D 525909 CDS YP_003109425.1 256371601 8322868 815999..817324 1 NC_013124.1 PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rxy:Rxyl_0638 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase 817324 8322868 Afer_0805 Acidimicrobium ferrooxidans DSM 10331 Cobyrinic acid ac-diamide synthase YP_003109425.1 815999 D 525909 CDS YP_003109426.1 256371602 8322869 817335..818156 1 NC_013124.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rxy:Rxyl_0640 precorrin-4 C11- methyltransferase; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 818156 8322869 Afer_0806 Acidimicrobium ferrooxidans DSM 10331 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003109426.1 817335 D 525909 CDS YP_003109427.1 256371603 8322870 818164..819225 1 NC_013124.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: rxy:Rxyl_0641 cobalt-precorrin-6A synthase; cobalamin biosynthesis protein CbiD 819225 8322870 Afer_0807 Acidimicrobium ferrooxidans DSM 10331 cobalamin biosynthesis protein CbiD YP_003109427.1 818164 D 525909 CDS YP_003109428.1 256371604 8322871 819222..820394 1 NC_013124.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; protein-L- isoaspartate(D-aspartate) O-methyltransferase; KEGG: syx:SynWH7803_1707 precorrin-6Y methylase; precorrin-6y C5,15-methyltransferase subunit CbiE 820394 8322871 Afer_0808 Acidimicrobium ferrooxidans DSM 10331 precorrin-6y C5,15-methyltransferase subunit CbiE YP_003109428.1 819222 D 525909 CDS YP_003109429.1 256371605 8322872 820955..821617 1 NC_013124.1 KEGG: rha:RHA1_ro01772 hypothetical protein; hypothetical protein 821617 8322872 Afer_0809 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109429.1 820955 D 525909 CDS YP_003109430.1 256371606 8322874 822464..824440 1 NC_013124.1 PFAM: peptidase M13; peptidase M13 neprilysin; KEGG: lxx:Lxx01010 metallopeptidase; Endothelin-converting enzyme 1 824440 8322874 Afer_0811 Acidimicrobium ferrooxidans DSM 10331 Endothelin-converting enzyme 1 YP_003109430.1 822464 D 525909 CDS YP_003109431.1 256371607 8322875 824531..825712 1 NC_013124.1 PFAM: homogentisate 12-dioxygenase; KEGG: stp:Strop_4258 homogentisate 1,2-dioxygenase; homogentisate 12-dioxygenase 825712 8322875 Afer_0812 Acidimicrobium ferrooxidans DSM 10331 homogentisate 12-dioxygenase YP_003109431.1 824531 D 525909 CDS YP_003109432.1 256371608 8322876 825709..826677 1 NC_013124.1 PFAM: beta-lactamase domain protein; KEGG: sen:SACE_4081 beta lactamase; beta-lactamase domain-containing protein 826677 8322876 Afer_0813 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase domain-containing protein YP_003109432.1 825709 D 525909 CDS YP_003109433.1 256371609 8322877 826674..828251 1 NC_013124.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sen:SACE_3057 pentachlorophenol monooxygenase; FAD-binding monooxygenase 828251 8322877 Afer_0814 Acidimicrobium ferrooxidans DSM 10331 FAD-binding monooxygenase YP_003109433.1 826674 D 525909 CDS YP_003109434.1 256371610 8322878 828263..829714 1 NC_013124.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase; KEGG: rha:RHA1_ro06605 cobyric acid synthase; cobyric acid synthase CobQ 829714 8322878 Afer_0815 Acidimicrobium ferrooxidans DSM 10331 cobyric acid synthase CobQ YP_003109434.1 828263 D 525909 CDS YP_003109435.1 256371611 8322879 829765..833292 1 NC_013124.1 KEGG: rxy:Rxyl_0635 cobaltochelatase; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase, CobN subunit 833292 8322879 Afer_0816 Acidimicrobium ferrooxidans DSM 10331 cobaltochelatase, CobN subunit YP_003109435.1 829765 D 525909 CDS YP_003109436.1 256371612 8322880 833289..835112 1 NC_013124.1 KEGG: nfa:nfa40830 magnesium chelatase subunit; PFAM: ATPase associated with various cellular activities AAA_5; AAA ATPase central domain protein; von Willebrand factor A; magnesium chelatase ChlI subunit; SMART: von Willebrand factor A; AAA ATPase; Magnesium chelatase 835112 8322880 Afer_0817 Acidimicrobium ferrooxidans DSM 10331 Magnesium chelatase YP_003109436.1 833289 D 525909 CDS YP_003109437.1 256371613 8322881 complement(835088..835735) 1 NC_013124.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: ank:AnaeK_3689 uracil-DNA glycosylase superfamily protein; Uracil-DNA glycosylase superfamily protein 835735 8322881 Afer_0818 Acidimicrobium ferrooxidans DSM 10331 Uracil-DNA glycosylase superfamily protein YP_003109437.1 835088 R 525909 CDS YP_003109438.1 256371614 8322882 835827..836162 1 NC_013124.1 KEGG: cno:NT01CX_1670 hypothetical protein; hypothetical protein 836162 8322882 Afer_0819 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109438.1 835827 D 525909 CDS YP_003109439.1 256371615 8322883 complement(836177..839371) 1 NC_013124.1 KEGG: met:M446_2712 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 839371 8322883 Afer_0820 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase/phosphodiesterase YP_003109439.1 836177 R 525909 CDS YP_003109440.1 256371616 8322884 839502..842459 1 NC_013124.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: dge:Dgeo_2746 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 842459 8322884 Afer_0821 Acidimicrobium ferrooxidans DSM 10331 formate dehydrogenase subunit alpha YP_003109440.1 839502 D 525909 CDS YP_003109441.1 256371617 8322885 842452..842844 1 NC_013124.1 KEGG: sgr:SGR_1901 chromosome segregation protein; chromosome segregation protein 842844 8322885 Afer_0822 Acidimicrobium ferrooxidans DSM 10331 chromosome segregation protein YP_003109441.1 842452 D 525909 CDS YP_003109442.1 256371618 8322886 843062..844138 1 NC_013124.1 KEGG: hsl:OE4113F branched-chain amino acid dehydrogenase E1 component alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 844138 8322886 Afer_0823 Acidimicrobium ferrooxidans DSM 10331 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha YP_003109442.1 843062 D 525909 CDS YP_003109443.1 256371619 8322887 844138..845118 1 NC_013124.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gka:GK3216 pyruvate dehydrogenase E1 (lipoamide) beta subunit; transketolase 845118 8322887 Afer_0824 Acidimicrobium ferrooxidans DSM 10331 transketolase YP_003109443.1 844138 D 525909 CDS YP_003109444.1 256371620 8322888 845184..846467 1 NC_013124.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: sth:STH413 pyruvate dehydrogenase E2; hypothetical protein 846467 8322888 Afer_0825 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109444.1 845184 D 525909 CDS YP_003109445.1 256371621 8322889 846467..847897 1 NC_013124.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: gka:GK1061 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 847897 8322889 Afer_0826 Acidimicrobium ferrooxidans DSM 10331 dihydrolipoamide dehydrogenase YP_003109445.1 846467 D 525909 CDS YP_003109446.1 256371622 8322890 complement(847928..849166) 1 NC_013124.1 KEGG: fal:FRAAL3473 acetyl-CoA hydrolase; acetyl-CoA hydrolase 849166 8322890 Afer_0827 Acidimicrobium ferrooxidans DSM 10331 acetyl-CoA hydrolase YP_003109446.1 847928 R 525909 CDS YP_003109447.1 256371623 8322891 complement(849190..850209) 1 NC_013124.1 PFAM: conserved hypothetical protein; KEGG: rxy:Rxyl_2377 conserved hypothetical protein 374; hypothetical protein 850209 8322891 Afer_0828 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109447.1 849190 R 525909 CDS YP_003109448.1 256371624 8322892 850508..851776 1 NC_013124.1 PFAM: protein of unknown function UPF0118; KEGG: kra:Krad_0518 hypothetical protein; hypothetical protein 851776 8322892 Afer_0829 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109448.1 850508 D 525909 CDS YP_003109449.1 256371625 8322893 complement(852279..854060) 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: nca:Noca_1551 hypothetical protein; group 1 glycosyl transferase 854060 8322893 Afer_0830 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003109449.1 852279 R 525909 CDS YP_003109450.1 256371626 8322894 854100..854945 1 NC_013124.1 KEGG: cjk:jk1999 hypothetical protein; hypothetical protein 854945 8322894 Afer_0831 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109450.1 854100 D 525909 CDS YP_003109451.1 256371627 8322895 854942..855619 1 NC_013124.1 PFAM: alpha/beta hydrolase fold; KEGG: mjl:Mjls_4806 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 855619 8322895 Afer_0832 Acidimicrobium ferrooxidans DSM 10331 alpha/beta hydrolase fold protein YP_003109451.1 854942 D 525909 CDS YP_003109452.1 256371628 8322896 855765..856058 1 NC_013124.1 PFAM: transcription factor WhiB; KEGG: ace:Acel_0560 transcription factor WhiB; transcription factor WhiB 856058 8322896 Afer_0833 Acidimicrobium ferrooxidans DSM 10331 transcription factor WhiB YP_003109452.1 855765 D 525909 CDS YP_003109453.1 256371629 8322897 complement(856305..857114) 1 NC_013124.1 PFAM: formate dehydrogenase subunit FdhD; KEGG: ttj:TTHB196 protein required for formate dehydrogenase activity; formate dehydrogenase subunit FdhD 857114 8322897 Afer_0834 Acidimicrobium ferrooxidans DSM 10331 formate dehydrogenase subunit FdhD YP_003109453.1 856305 R 525909 CDS YP_003109454.1 256371630 8322898 857193..857801 1 NC_013124.1 KEGG: saq:Sare_3891 hypothetical protein; hypothetical protein 857801 8322898 Afer_0835 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109454.1 857193 D 525909 CDS YP_003109455.1 256371631 8322899 complement(857812..858513) 1 NC_013124.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: afw:Anae109_0752 hypothetical protein; hypothetical protein 858513 8322899 Afer_0836 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109455.1 857812 R 525909 CDS YP_003109456.1 256371632 8322900 858579..858950 1 NC_013124.1 hypothetical protein 858950 8322900 Afer_0837 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109456.1 858579 D 525909 CDS YP_003109457.1 256371633 8322901 complement(859218..860342) 1 NC_013124.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bcm:Bcenmc03_1911 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 860342 8322901 Afer_0838 Acidimicrobium ferrooxidans DSM 10331 mechanosensitive ion channel MscS YP_003109457.1 859218 R 525909 CDS YP_003109458.1 256371634 8322902 860438..860899 1 NC_013124.1 PFAM: MaoC domain protein dehydratase; KEGG: sma:SAV_6603 hypothetical protein; MaoC domain-containing protein dehydratase 860899 8322902 Afer_0839 Acidimicrobium ferrooxidans DSM 10331 MaoC domain-containing protein dehydratase YP_003109458.1 860438 D 525909 CDS YP_003109459.1 256371635 8322903 860933..861787 1 NC_013124.1 PFAM: protein of unknown function DUF344; KEGG: mpt:Mpe_A3289 polyphosphate:AMP phosphotransferase; polyphosphate:AMP phosphotransferase 861787 8322903 Afer_0840 Acidimicrobium ferrooxidans DSM 10331 polyphosphate:AMP phosphotransferase YP_003109459.1 860933 D 525909 CDS YP_003109460.1 256371636 8322904 861784..861984 1 NC_013124.1 hypothetical protein 861984 8322904 Afer_0841 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109460.1 861784 D 525909 CDS YP_003109461.1 256371637 8322905 862040..862747 1 NC_013124.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: Methyltransferase type 11; Methionine biosynthesis MetW protein; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: sru:SRU_0824 ubiquinone/menaquinone biosynthesis methyltransferase UbiE; ubiquinone/menaquinone biosynthesis methyltransferase 862747 8322905 Afer_0842 Acidimicrobium ferrooxidans DSM 10331 ubiquinone/menaquinone biosynthesis methyltransferase YP_003109461.1 862040 D 525909 CDS YP_003109462.1 256371638 8322906 862744..863898 1 NC_013124.1 PFAM: Chorismate binding-like; KEGG: bcj:BCAM2235 pyochelin biosynthetic protein PchA; Chorismate binding-like protein 863898 8322906 Afer_0843 Acidimicrobium ferrooxidans DSM 10331 Chorismate binding-like protein YP_003109462.1 862744 D 525909 CDS YP_003109463.1 256371639 8322907 863891..866728 1 NC_013124.1 KEGG: mbb:BCG_1676 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 866728 8322907 Afer_0844 Acidimicrobium ferrooxidans DSM 10331 excinuclease ABC subunit A YP_003109463.1 863891 D 525909 CDS YP_003109464.1 256371640 8322908 866725..868587 1 NC_013124.1 KEGG: mbb:BCG_1481 excinuclease ABC subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C 868587 8322908 Afer_0845 Acidimicrobium ferrooxidans DSM 10331 excinuclease ABC subunit C YP_003109464.1 866725 D 525909 CDS YP_003109465.1 256371641 8322909 868584..869339 1 NC_013124.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bbt:BBta_2180 methyltransferase; type 11 methyltransferase 869339 8322909 Afer_0846 Acidimicrobium ferrooxidans DSM 10331 type 11 methyltransferase YP_003109465.1 868584 D 525909 CDS YP_003109466.1 256371642 8322910 869336..870193 1 NC_013124.1 PFAM: conserved hypothetical protein; KEGG: ace:Acel_1111 hypothetical protein; hypothetical protein 870193 8322910 Afer_0847 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109466.1 869336 D 525909 CDS YP_003109467.1 256371643 8322911 870190..871086 1 NC_013124.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: fal:FRAAL4591 hypothetical protein; hypothetical protein 871086 8322911 Afer_0848 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109467.1 870190 D 525909 CDS YP_003109468.1 256371644 8322912 871180..872205 1 NC_013124.1 KEGG: kra:Krad_2931 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 872205 8322912 Afer_0849 Acidimicrobium ferrooxidans DSM 10331 glyceraldehyde-3-phosphate dehydrogenase, type I YP_003109468.1 871180 D 525909 CDS YP_003109469.1 256371645 8322913 872205..873341 1 NC_013124.1 PFAM: phosphoglycerate kinase; KEGG: rxy:Rxyl_2004 phosphoglycerate kinase; phosphoglycerate kinase 873341 8322913 Afer_0850 Acidimicrobium ferrooxidans DSM 10331 phosphoglycerate kinase YP_003109469.1 872205 D 525909 CDS YP_003109470.1 256371646 8322914 873338..874165 1 NC_013124.1 KEGG: ace:Acel_1115 phosphoglycerate kinase., triose-phosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase 874165 8322914 Afer_0851 Acidimicrobium ferrooxidans DSM 10331 triosephosphate isomerase YP_003109470.1 873338 D 525909 CDS YP_003109471.1 256371647 8322915 874195..874422 1 NC_013124.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: cmi:CMM_1741 preprotein translocase subunit SecG; preprotein translocase subunit SecG 874422 8322915 Afer_0852 Acidimicrobium ferrooxidans DSM 10331 preprotein translocase subunit SecG YP_003109471.1 874195 D 525909 CDS YP_003109472.1 256371648 8322916 874801..875496 1 NC_013124.1 KEGG: kra:Krad_1568 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS sensor protein 875496 8322916 Afer_0853 Acidimicrobium ferrooxidans DSM 10331 PAS sensor protein YP_003109472.1 874801 D 525909 CDS YP_003109473.1 256371649 8322917 875503..876174 1 NC_013124.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: kra:Krad_1569 signal transduction protein; signal transduction protein 876174 8322917 Afer_0854 Acidimicrobium ferrooxidans DSM 10331 signal transduction protein YP_003109473.1 875503 D 525909 CDS YP_003109474.1 256371650 8322918 complement(876211..877836) 1 NC_013124.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: afe:Lferr_1745 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 877836 8322918 Afer_0855 Acidimicrobium ferrooxidans DSM 10331 ErfK/YbiS/YcfS/YnhG family protein YP_003109474.1 876211 R 525909 CDS YP_003109475.1 256371651 8322919 877952..878551 1 NC_013124.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ace:Acel_1795 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like protein 878551 8322919 Afer_0856 Acidimicrobium ferrooxidans DSM 10331 multiple antibiotic resistance (MarC)-like protein YP_003109475.1 877952 D 525909 CDS YP_003109476.1 256371652 8322921 complement(879458..880375) 1 NC_013124.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gsu:GSU0487 cation efflux family protein; cation diffusion facilitator family transporter 880375 8322921 Afer_0858 Acidimicrobium ferrooxidans DSM 10331 cation diffusion facilitator family transporter YP_003109476.1 879458 R 525909 CDS YP_003109477.1 256371653 8322922 880595..881257 1 NC_013124.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: xau:Xaut_2363 peroxidase; Peroxidase 881257 8322922 Afer_0859 Acidimicrobium ferrooxidans DSM 10331 Peroxidase YP_003109477.1 880595 D 525909 CDS YP_003109478.1 256371654 8322923 881462..882490 1 NC_013124.1 PFAM: Luciferase-like monooxygenase; KEGG: sco:SCO6786 oxidoreductase; Luciferase-like monooxygenase 882490 8322923 Afer_0860 Acidimicrobium ferrooxidans DSM 10331 Luciferase-like monooxygenase YP_003109478.1 881462 D 525909 CDS YP_003109479.1 256371655 8322924 882508..883581 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: fal:FRAAL2169 glycosyl transferase; family 2 glycosyl transferase 883581 8322924 Afer_0861 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003109479.1 882508 D 525909 CDS YP_003109480.1 256371656 8322925 883551..884030 1 NC_013124.1 KEGG: mar:MAE_29540 hypothetical protein; hypothetical protein 884030 8322925 Afer_0862 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109480.1 883551 D 525909 CDS YP_003109481.1 256371657 8322926 complement(884753..885319) 1 NC_013124.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cjk:jk0518 oligoribonuclease; Exonuclease RNase T and DNA polymerase III 885319 8322926 Afer_0863 Acidimicrobium ferrooxidans DSM 10331 Exonuclease RNase T and DNA polymerase III YP_003109481.1 884753 R 525909 CDS YP_003109482.1 256371658 8322927 885376..886191 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: sen:SACE_2289 dolichyl-phosphate beta-D- mannosyltransferase; Dolichyl-phosphate beta-D-mannosyltransferase 886191 8322927 Afer_0864 Acidimicrobium ferrooxidans DSM 10331 Dolichyl-phosphate beta-D-mannosyltransferase YP_003109482.1 885376 D 525909 CDS YP_003109483.1 256371659 8322928 886173..886613 1 NC_013124.1 KEGG: ckl:CKL_1144 hypothetical protein; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 886613 8322928 Afer_0865 Acidimicrobium ferrooxidans DSM 10331 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_003109483.1 886173 D 525909 CDS YP_003109484.1 256371660 8322930 886963..887133 1 NC_013124.1 hypothetical protein 887133 8322930 Afer_0866 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109484.1 886963 D 525909 CDS YP_003109485.1 256371661 8322931 887140..888603 1 NC_013124.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bph:Bphy_6281 permease for cytosine/purines uracil thiamine allantoin; cytosine/purines uracil thiamine allantoin permease 888603 8322931 Afer_0867 Acidimicrobium ferrooxidans DSM 10331 cytosine/purines uracil thiamine allantoin permease YP_003109485.1 887140 D 525909 CDS YP_003109486.1 256371662 8322932 888735..889127 1 NC_013124.1 PFAM: DoxX family protein; KEGG: dge:Dgeo_2087 DoxX; DoxX family protein 889127 8322932 Afer_0868 Acidimicrobium ferrooxidans DSM 10331 DoxX family protein YP_003109486.1 888735 D 525909 CDS YP_003109487.1 256371663 8322933 889332..889511 1 NC_013124.1 hypothetical protein 889511 8322933 Afer_0869 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109487.1 889332 D 525909 CDS YP_003109488.1 256371664 8322934 889525..890511 1 NC_013124.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mbn:Mboo_0434 protein kinase; serine/threonine protein kinase 890511 8322934 Afer_0870 Acidimicrobium ferrooxidans DSM 10331 serine/threonine protein kinase YP_003109488.1 889525 D 525909 CDS YP_003109489.1 256371665 8322935 890539..891753 1 NC_013124.1 PFAM: glutamine synthetase catalytic region; KEGG: blj:BLD_0159 glutamine synthetase; glutamine synthetase catalytic subunit 891753 8322935 Afer_0871 Acidimicrobium ferrooxidans DSM 10331 glutamine synthetase catalytic subunit YP_003109489.1 890539 D 525909 CDS YP_003109490.1 256371666 8322936 891937..893514 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: mbn:Mboo_0439 amino acid permease-associated region; amino acid permease-associated protein 893514 8322936 Afer_0872 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003109490.1 891937 D 525909 CDS YP_003109491.1 256371667 8322937 893598..894446 1 NC_013124.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: dra:DR_2513 hypothetical protein; protein serine/threonine phosphatase 894446 8322937 Afer_0873 Acidimicrobium ferrooxidans DSM 10331 protein serine/threonine phosphatase YP_003109491.1 893598 D 525909 CDS YP_003109492.1 256371668 8322938 complement(894443..896053) 1 NC_013124.1 PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: cmi:CMM_0968 phosphoenolpyruvate--protein phosphatase; PEP-utilizing protein 896053 8322938 Afer_0874 Acidimicrobium ferrooxidans DSM 10331 PEP-utilizing protein YP_003109492.1 894443 R 525909 CDS YP_003109493.1 256371669 8322939 896232..897119 1 NC_013124.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: sco:SCO4057 transport integral membrane protein; MIP family channel protein 897119 8322939 Afer_0875 Acidimicrobium ferrooxidans DSM 10331 MIP family channel protein YP_003109493.1 896232 D 525909 CDS YP_003109494.1 256371670 8322940 897116..898609 1 NC_013124.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: chy:CHY_1839 glycerol kinase; glycerol kinase 898609 8322940 Afer_0876 Acidimicrobium ferrooxidans DSM 10331 glycerol kinase YP_003109494.1 897116 D 525909 CDS YP_003109495.1 256371671 8322941 898632..899633 1 NC_013124.1 KEGG: hmo:HM1_0840 dihydroxyacetone kinase, dhak subunit; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase; dihydroxyacetone kinase, DhaK subunit 899633 8322941 Afer_0877 Acidimicrobium ferrooxidans DSM 10331 dihydroxyacetone kinase, DhaK subunit YP_003109495.1 898632 D 525909 CDS YP_003109496.1 256371672 8322942 899630..900259 1 NC_013124.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: lxx:Lxx09880 dihydroxyacetone kinase; dihydroxyacetone kinase, L subunit 900259 8322942 Afer_0878 Acidimicrobium ferrooxidans DSM 10331 dihydroxyacetone kinase, L subunit YP_003109496.1 899630 D 525909 CDS YP_003109497.1 256371673 8322943 900270..900653 1 NC_013124.1 PFAM: PTS system fructose subfamily IIA component; KEGG: rsa:RSal33209_3182 dihydroxyacetone kinase phosphotransfer protein; PTS system fructose subfamily IIA component 900653 8322943 Afer_0879 Acidimicrobium ferrooxidans DSM 10331 PTS system fructose subfamily IIA component YP_003109497.1 900270 D 525909 CDS YP_003109498.1 256371674 8322944 900650..902110 1 NC_013124.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rca:Rcas_4111 FAD dependent oxidoreductase; FAD dependent oxidoreductase 902110 8322944 Afer_0880 Acidimicrobium ferrooxidans DSM 10331 FAD dependent oxidoreductase YP_003109498.1 900650 D 525909 CDS YP_003109499.1 256371675 8322945 902107..903138 1 NC_013124.1 KEGG: rca:Rcas_4112 anaerobic glycerol-3-phosphate dehydrogenase subunit B; hypothetical protein 903138 8322945 Afer_0881 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109499.1 902107 D 525909 CDS YP_003109500.1 256371676 8322946 903132..904292 1 NC_013124.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: yen:YE0214 sn-glycerol-3-phosphate dehydrogenase subunit C; hypothetical protein 904292 8322946 Afer_0882 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109500.1 903132 D 525909 CDS YP_003109501.1 256371677 8322947 904289..904900 1 NC_013124.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: tte:TTE2004 glycerol-3-phosphate responsive antiterminator (mRNA-binding); glycerol-3-phosphate responsive antiterminator, GlpP 904900 8322947 Afer_0883 Acidimicrobium ferrooxidans DSM 10331 glycerol-3-phosphate responsive antiterminator, GlpP YP_003109501.1 904289 D 525909 CDS YP_003109502.1 256371678 8322948 904897..905217 1 NC_013124.1 PFAM: phosphoryl transfer system HPr; KEGG: lsp:Bsph_2351 phosphocarrier protein HPr (histidine-containing protein); phosphotransferase system, phosphocarrier protein HPr 905217 8322948 Afer_0884 Acidimicrobium ferrooxidans DSM 10331 phosphotransferase system, phosphocarrier protein HPr YP_003109502.1 904897 D 525909 CDS YP_003109503.1 256371679 8322949 905398..906279 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saq:Sare_4780 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 906279 8322949 Afer_0885 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109503.1 905398 D 525909 CDS YP_003109504.1 256371680 8322950 906312..908144 1 NC_013124.1 PFAM: extracellular solute-binding protein family 5; KEGG: saq:Sare_4778 extracellular solute-binding protein; family 5 extracellular solute-binding protein 908144 8322950 Afer_0886 Acidimicrobium ferrooxidans DSM 10331 family 5 extracellular solute-binding protein YP_003109504.1 906312 D 525909 CDS YP_003109505.1 256371681 8322951 908148..909089 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO6113 peptide ABC transporter integral membrane protein; binding-protein-dependent transport systems inner membrane component 909089 8322951 Afer_0887 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109505.1 908148 D 525909 CDS YP_003109506.1 256371682 8322952 909086..909967 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saq:Sare_4780 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 909967 8322952 Afer_0888 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109506.1 909086 D 525909 CDS YP_003109507.1 256371683 8322953 909964..911427 1 NC_013124.1 PFAM: FAD dependent oxidoreductase; KEGG: sgr:SGR_1833 FAD-dependent oxidoreductase; FAD dependent oxidoreductase 911427 8322953 Afer_0889 Acidimicrobium ferrooxidans DSM 10331 FAD dependent oxidoreductase YP_003109507.1 909964 D 525909 CDS YP_003109508.1 256371684 8322954 911440..913512 1 NC_013124.1 KEGG: stp:Strop_4339 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 913512 8322954 Afer_0890 Acidimicrobium ferrooxidans DSM 10331 oligopeptide/dipeptide ABC transporter ATPase subunit YP_003109508.1 911440 D 525909 CDS YP_003109509.1 256371685 8322955 complement(913434..914612) 1 NC_013124.1 PFAM: acyltransferase 3; KEGG: mxa:MXAN_1049 acyltransferase family protein; acyltransferase 3 914612 8322955 Afer_0891 Acidimicrobium ferrooxidans DSM 10331 acyltransferase 3 YP_003109509.1 913434 R 525909 CDS YP_003109510.1 256371686 8322956 complement(914841..915791) 1 NC_013124.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mpa:MAP0820 hypothetical protein; tRNA/rRNA methyltransferase SpoU 915791 8322956 Afer_0892 Acidimicrobium ferrooxidans DSM 10331 tRNA/rRNA methyltransferase SpoU YP_003109510.1 914841 R 525909 CDS YP_003109511.1 256371687 8322957 complement(915788..916633) 1 NC_013124.1 PFAM: CHAD domain containing protein; KEGG: afw:Anae109_0571 CHAD domain-containing protein; CHAD domain-containing protein 916633 8322957 Afer_0893 Acidimicrobium ferrooxidans DSM 10331 CHAD domain-containing protein YP_003109511.1 915788 R 525909 CDS YP_003109512.1 256371688 8322958 complement(916676..917458) 1 NC_013124.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pfu:PF0432 sugar-catabolism phosphotransferase; HAD-superfamily hydrolase 917458 8322958 Afer_0894 Acidimicrobium ferrooxidans DSM 10331 HAD-superfamily hydrolase YP_003109512.1 916676 R 525909 CDS YP_003109513.1 256371689 8322959 917563..918612 1 NC_013124.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 918612 8322959 Afer_0895 Acidimicrobium ferrooxidans DSM 10331 fructose-bisphosphate aldolase YP_003109513.1 917563 D 525909 CDS YP_003109514.1 256371690 8322960 complement(918632..919336) 1 NC_013124.1 PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; KEGG: stp:Strop_1906 tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat-containing protein 919336 8322960 Afer_0896 Acidimicrobium ferrooxidans DSM 10331 Tetratricopeptide TPR_2 repeat-containing protein YP_003109514.1 918632 R 525909 CDS YP_003109515.1 256371691 8322961 919409..920080 1 NC_013124.1 KEGG: predicted protein; hypothetical protein 920080 8322961 Afer_0897 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109515.1 919409 D 525909 CDS YP_003109516.1 256371692 8322962 920111..920842 1 NC_013124.1 KEGG: LOC100146717; hypothetical protein LOC100146717; hypothetical protein 920842 8322962 Afer_0898 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109516.1 920111 D 525909 CDS YP_003109517.1 256371693 8322963 complement(920802..921824) 1 NC_013124.1 PFAM: conserved hypothetical protein; KEGG: cya:CYA_0770 hypothetical protein; hypothetical protein 921824 8322963 Afer_0899 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109517.1 920802 R 525909 CDS YP_003109518.1 256371694 8322964 complement(921821..924094) 1 NC_013124.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rxy:Rxyl_0975 FO synthase; Radical SAM domain-containing protein 924094 8322964 Afer_0900 Acidimicrobium ferrooxidans DSM 10331 Radical SAM domain-containing protein YP_003109518.1 921821 R 525909 CDS YP_003109519.1 256371695 8322965 complement(924104..924826) 1 NC_013124.1 KEGG: ace:Acel_1122 6-phosphogluconolactonase; 6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase-like protein 924826 8322965 Afer_0901 Acidimicrobium ferrooxidans DSM 10331 6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase-like protein YP_003109519.1 924104 R 525909 CDS YP_003109520.1 256371696 8322966 924936..925235 1 NC_013124.1 hypothetical protein 925235 8322966 Afer_0902 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109520.1 924936 D 525909 CDS YP_003109521.1 256371697 8322967 925249..925455 1 NC_013124.1 hypothetical protein 925455 8322967 Afer_0903 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109521.1 925249 D 525909 CDS YP_003109522.1 256371698 8322968 925455..925667 1 NC_013124.1 hypothetical protein 925667 8322968 Afer_0904 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109522.1 925455 D 525909 CDS YP_003109523.1 256371699 8322969 925664..926554 1 NC_013124.1 PFAM: tRNA methyltransferase complex GCD14 subunit; protein-L-isoaspartate(D-aspartate) O-methyltransferase; SMART: ribosomal RNA adenine methylase transferase; KEGG: cmi:CMM_1691 methyltransferase; tRNA methyltransferase complex GCD14 subunit 926554 8322969 Afer_0905 Acidimicrobium ferrooxidans DSM 10331 tRNA methyltransferase complex GCD14 subunit YP_003109523.1 925664 D 525909 CDS YP_003109524.1 256371700 8322970 complement(926802..927038) 1 NC_013124.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: saq:Sare_2357 hypothetical protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 927038 8322970 Afer_0906 Acidimicrobium ferrooxidans DSM 10331 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003109524.1 926802 R 525909 CDS YP_003109525.1 256371701 8322971 927175..928914 1 NC_013124.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: tfu:Tfu_1809 vesicle-fusing ATPase; AAA ATPase central domain-containing protein 928914 8322971 Afer_0907 Acidimicrobium ferrooxidans DSM 10331 AAA ATPase central domain-containing protein YP_003109525.1 927175 D 525909 CDS YP_003109526.1 256371702 8322972 928935..930428 1 NC_013124.1 PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: fra:Francci3_2629 hypothetical protein; hypothetical protein 930428 8322972 Afer_0908 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109526.1 928935 D 525909 CDS YP_003109527.1 256371703 8322973 930451..930645 1 NC_013124.1 PFAM: protein of unknown function DUF797; KEGG: tfu:Tfu_1791 hypothetical protein; hypothetical protein 930645 8322973 Afer_0909 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109527.1 930451 D 525909 CDS YP_003109528.1 256371704 8322974 930722..931543 1 NC_013124.1 PFAM: 20S proteasome A and B subunits; KEGG: nca:Noca_2645 proteasome subunit beta; 20S proteasome subunits A and B 931543 8322974 Afer_0910 Acidimicrobium ferrooxidans DSM 10331 20S proteasome subunits A and B YP_003109528.1 930722 D 525909 CDS YP_003109529.1 256371705 8322975 931540..932238 1 NC_013124.1 PFAM: 20S proteasome A and B subunits; KEGG: kra:Krad_1874 20S proteasome A and B subunits; 20S proteasome subunits A and B 932238 8322975 Afer_0911 Acidimicrobium ferrooxidans DSM 10331 20S proteasome subunits A and B YP_003109529.1 931540 D 525909 CDS YP_003109530.1 256371706 8322976 932239..933606 1 NC_013124.1 PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: ace:Acel_1191 hypothetical protein; hypothetical protein 933606 8322976 Afer_0912 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109530.1 932239 D 525909 CDS YP_003109531.1 256371707 8322977 933606..934136 1 NC_013124.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: pth:PTH_1717 signal peptidase I; signal peptidase I 934136 8322977 Afer_0913 Acidimicrobium ferrooxidans DSM 10331 signal peptidase I YP_003109531.1 933606 D 525909 CDS YP_003109532.1 256371708 8322978 complement(934150..934494) 1 NC_013124.1 KEGG: ace:Acel_1202 hypothetical protein; hypothetical protein 934494 8322978 Afer_0914 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109532.1 934150 R 525909 CDS YP_003109533.1 256371709 8322979 934656..935627 1 NC_013124.1 KEGG: mab:MAB_3683c tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 935627 8322979 Afer_0915 Acidimicrobium ferrooxidans DSM 10331 tryptophanyl-tRNA synthetase YP_003109533.1 934656 D 525909 CDS YP_003109534.1 256371710 8322980 935648..936001 1 NC_013124.1 KEGG: bid:Bind_2704 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein, TatB subunit 936001 8322980 Afer_0916 Acidimicrobium ferrooxidans DSM 10331 twin-arginine translocation protein, TatB subunit YP_003109534.1 935648 D 525909 CDS YP_003109535.1 256371711 8322981 936001..936777 1 NC_013124.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: fre:Franean1_4868 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase, TatC subunit 936777 8322981 Afer_0917 Acidimicrobium ferrooxidans DSM 10331 Sec-independent protein translocase, TatC subunit YP_003109535.1 936001 D 525909 CDS YP_003109536.1 256371712 8322982 936851..939298 1 NC_013124.1 PFAM: DEAD/DEAH box helicase domain protein; DSH domain protein; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein; KEGG: ace:Acel_1206 DSH domain-containing protein; DEAD/DEAH box helicase domain-containing protein 939298 8322982 Afer_0918 Acidimicrobium ferrooxidans DSM 10331 DEAD/DEAH box helicase domain-containing protein YP_003109536.1 936851 D 525909 CDS YP_003109537.1 256371713 8322983 939310..940908 1 NC_013124.1 PFAM: thymidylate synthase complementing protein ThyX; KEGG: rrs:RoseRS_0926 thymidylate synthase complementing protein ThyX; thymidylate synthase complementing protein ThyX 940908 8322983 Afer_0919 Acidimicrobium ferrooxidans DSM 10331 thymidylate synthase complementing protein ThyX YP_003109537.1 939310 D 525909 CDS YP_003109538.1 256371714 8322984 complement(940905..941495) 1 NC_013124.1 KEGG: hypothetical protein LOC100012673; hypothetical protein 941495 8322984 Afer_0920 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109538.1 940905 R 525909 CDS YP_003109539.1 256371715 8322985 941529..942128 1 NC_013124.1 hypothetical protein 942128 8322985 Afer_0921 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109539.1 941529 D 525909 CDS YP_003109540.1 256371716 8322986 complement(942154..942564) 1 NC_013124.1 PFAM: NUDIX hydrolase; KEGG: smr:Smar_1194 NUDIX hydrolase; NUDIX hydrolase 942564 8322986 Afer_0922 Acidimicrobium ferrooxidans DSM 10331 NUDIX hydrolase YP_003109540.1 942154 R 525909 CDS YP_003109541.1 256371717 8322987 complement(942575..942898) 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A4157 MarR family transcriptional regulator; GCN5-like N-acetyltransferase 942898 8322987 Afer_0923 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003109541.1 942575 R 525909 CDS YP_003109542.1 256371718 8322988 complement(942906..944570) 1 NC_013124.1 KEGG: Hypothetical protein CBG02561; hypothetical protein 944570 8322988 Afer_0924 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109542.1 942906 R 525909 CDS YP_003109543.1 256371719 8322991 946623..948158 1 NC_013124.1 PFAM: Curculin domain protein (mannose-binding) lectin; SMART: Curculin domain protein (mannose-binding) lectin; KEGG: bam:Bamb_0766 curculin domain-containing protein; Curculin domain-containing protein (mannose-binding) lectin 948158 8322991 Afer_0927 Acidimicrobium ferrooxidans DSM 10331 Curculin domain-containing protein (mannose-binding) lectin YP_003109543.1 946623 D 525909 CDS YP_003109544.1 256371720 8322992 948187..948939 1 NC_013124.1 hypothetical protein 948939 8322992 Afer_0928 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109544.1 948187 D 525909 CDS YP_003109545.1 256371721 8322994 complement(950500..950742) 1 NC_013124.1 PFAM: CopG domain protein DNA-binding domain protein; CopG domain-containing protein DNA-binding domain-containing protein 950742 8322994 Afer_0930 Acidimicrobium ferrooxidans DSM 10331 CopG domain-containing protein DNA-binding domain-containing protein YP_003109545.1 950500 R 525909 CDS YP_003109546.1 256371722 8322995 950826..951344 1 NC_013124.1 KEGG: bpl:BURPS1106A_2451 S-adenosylhomocysteine hydrolase; hypothetical protein 951344 8322995 Afer_0931 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109546.1 950826 D 525909 CDS YP_003109547.1 256371723 8322998 952797..953024 1 NC_013124.1 KEGG: nca:Noca_3127 hypothetical protein; hypothetical protein 953024 8322998 Afer_0934 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109547.1 952797 D 525909 CDS YP_003109548.1 256371724 8322999 953021..953776 1 NC_013124.1 PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: afw:Anae109_1054 oxidoreductase FAD/NAD(P)- binding subunit; Oxidoreductase FAD-binding domain-containing protein 953776 8322999 Afer_0935 Acidimicrobium ferrooxidans DSM 10331 Oxidoreductase FAD-binding domain-containing protein YP_003109548.1 953021 D 525909 CDS YP_003109549.1 256371725 8323001 954769..955878 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_0383 glycosyl transferase, group 1; group 1 glycosyl transferase 955878 8323001 Afer_0937 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003109549.1 954769 D 525909 CDS YP_003109550.1 256371726 8323002 955891..956373 1 NC_013124.1 PFAM: cyclase/dehydrase; KEGG: fal:FRAAL0171 hypothetical protein; cyclase/dehydrase 956373 8323002 Afer_0938 Acidimicrobium ferrooxidans DSM 10331 cyclase/dehydrase YP_003109550.1 955891 D 525909 CDS YP_003109551.1 256371727 8323003 956464..957786 1 NC_013124.1 PFAM: aminotransferase class I and II; KEGG: aae:aq_2094 aminotransferase; class I and II aminotransferase 957786 8323003 Afer_0939 Acidimicrobium ferrooxidans DSM 10331 class I and II aminotransferase YP_003109551.1 956464 D 525909 CDS YP_003109552.1 256371728 8323004 complement(957757..959145) 1 NC_013124.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: fal:FRAAL1414 GntR family transcriptional regulator; GntR family transcriptional regulator 959145 8323004 Afer_0940 Acidimicrobium ferrooxidans DSM 10331 GntR family transcriptional regulator YP_003109552.1 957757 R 525909 CDS YP_003109553.1 256371729 8323005 959275..960570 1 NC_013124.1 PFAM: aminotransferase class-III; KEGG: sen:SACE_3418 aminotransferase class III; class III aminotransferase 960570 8323005 Afer_0941 Acidimicrobium ferrooxidans DSM 10331 class III aminotransferase YP_003109553.1 959275 D 525909 CDS YP_003109554.1 256371730 8323006 960570..962057 1 NC_013124.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sen:SACE_5185 methylmalonate-semialdehyde dehydrogenase (acylating); methylmalonate-semialdehyde dehydrogenase 962057 8323006 Afer_0942 Acidimicrobium ferrooxidans DSM 10331 methylmalonate-semialdehyde dehydrogenase YP_003109554.1 960570 D 525909 CDS YP_003109555.1 256371731 8323007 962159..963208 1 NC_013124.1 TIGRFAM:S-adenosylmethionine/tRNA- ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; KEGG: mta:Moth_1695 S-adenosylmethionine; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 963208 8323007 Afer_0943 Acidimicrobium ferrooxidans DSM 10331 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_003109555.1 962159 D 525909 CDS YP_003109556.1 256371732 8323008 963205..964341 1 NC_013124.1 KEGG: rxy:Rxyl_1330 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 964341 8323008 Afer_0944 Acidimicrobium ferrooxidans DSM 10331 queuine tRNA-ribosyltransferase YP_003109556.1 963205 D 525909 CDS YP_003109557.1 256371733 8323009 964371..965861 1 NC_013124.1 TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; KEGG: sen:SACE_2025 preprotein translocase subunit SecD; protein-export membrane protein SecD 965861 8323009 Afer_0945 Acidimicrobium ferrooxidans DSM 10331 protein-export membrane protein SecD YP_003109557.1 964371 D 525909 CDS YP_003109558.1 256371734 8323010 965858..966907 1 NC_013124.1 TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: ace:Acel_1340 preprotein translocase subunit SecF; protein-export membrane protein SecF 966907 8323010 Afer_0946 Acidimicrobium ferrooxidans DSM 10331 protein-export membrane protein SecF YP_003109558.1 965858 D 525909 CDS YP_003109559.1 256371735 8323011 966917..969082 1 NC_013124.1 KEGG: ace:Acel_1338 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 969082 8323011 Afer_0947 Acidimicrobium ferrooxidans DSM 10331 (p)ppGpp synthetase I SpoT/RelA YP_003109559.1 966917 D 525909 CDS YP_003109560.1 256371736 8323012 969247..970887 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: tac:Ta0427 L-asparagine permease related protein; amino acid permease-associated protein 970887 8323012 Afer_0948 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003109560.1 969247 D 525909 CDS YP_003109561.1 256371737 8323013 971013..971369 1 NC_013124.1 hypothetical protein 971369 8323013 Afer_0949 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109561.1 971013 D 525909 CDS YP_003109562.1 256371738 8323014 971366..971587 1 NC_013124.1 hypothetical protein 971587 8323014 Afer_0950 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109562.1 971366 D 525909 CDS YP_003109563.1 256371739 8323015 971587..974151 1 NC_013124.1 KEGG: mca:MCA0389 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase class IIc; Threonyl/alanyl tRNA synthetase SAD; alanyl-tRNA synthetase 974151 8323015 Afer_0951 Acidimicrobium ferrooxidans DSM 10331 alanyl-tRNA synthetase YP_003109563.1 971587 D 525909 CDS YP_003109564.1 256371740 8323016 974148..974564 1 NC_013124.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: ade:Adeh_1232 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF 974564 8323016 Afer_0952 Acidimicrobium ferrooxidans DSM 10331 Holliday junction resolvase YqgF YP_003109564.1 974148 D 525909 CDS YP_003109565.1 256371741 8323017 974561..975568 1 NC_013124.1 PFAM: aminodeoxychorismate lyase; KEGG: ace:Acel_1328 aminodeoxychorismate lyase; aminodeoxychorismate lyase 975568 8323017 Afer_0953 Acidimicrobium ferrooxidans DSM 10331 aminodeoxychorismate lyase YP_003109565.1 974561 D 525909 CDS YP_003109566.1 256371742 8323018 975565..976401 1 NC_013124.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: rxy:Rxyl_1362 shikimate dehydrogenase; shikimate 5-dehydrogenase 976401 8323018 Afer_0954 Acidimicrobium ferrooxidans DSM 10331 shikimate 5-dehydrogenase YP_003109566.1 975565 D 525909 CDS YP_003109567.1 256371743 8323019 complement(976557..977675) 1 NC_013124.1 PFAM: PspA/IM30 family protein; KEGG: ace:Acel_0950 phage shock protein A, PspA; phage shock protein A, PspA 977675 8323019 Afer_0955 Acidimicrobium ferrooxidans DSM 10331 phage shock protein A, PspA YP_003109567.1 976557 R 525909 CDS YP_003109568.1 256371744 8323020 977838..978986 1 NC_013124.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: nca:Noca_3461 rod shape-determining protein RodA; rod shape-determining protein RodA 978986 8323020 Afer_0956 Acidimicrobium ferrooxidans DSM 10331 rod shape-determining protein RodA YP_003109568.1 977838 D 525909 CDS YP_003109569.1 256371745 8323021 978976..979437 1 NC_013124.1 PFAM: protein of unknown function DUF151; KEGG: sth:STH3179 hypothetical protein; hypothetical protein 979437 8323021 Afer_0957 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109569.1 978976 D 525909 CDS YP_003109570.1 256371746 8323022 complement(979447..980298) 1 NC_013124.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: dac:Daci_1541 nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 980298 8323022 Afer_0958 Acidimicrobium ferrooxidans DSM 10331 nicotinate-nucleotide pyrophosphorylase YP_003109570.1 979447 R 525909 CDS YP_003109571.1 256371747 8323023 complement(980295..981770) 1 NC_013124.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: ret:RHE_PE00440 L-aspartate oxidase; L-aspartate oxidase 981770 8323023 Afer_0959 Acidimicrobium ferrooxidans DSM 10331 L-aspartate oxidase YP_003109571.1 980295 R 525909 CDS YP_003109572.1 256371748 8323024 complement(981767..982777) 1 NC_013124.1 KEGG: ace:Acel_1145 quinolinate synthetase; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 982777 8323024 Afer_0960 Acidimicrobium ferrooxidans DSM 10331 quinolinate synthetase complex subunit A YP_003109572.1 981767 R 525909 CDS YP_003109573.1 256371749 8323025 complement(982764..983465) 1 NC_013124.1 KEGG: nha:Nham_2818 hypothetical protein; hypothetical protein 983465 8323025 Afer_0961 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109573.1 982764 R 525909 CDS YP_003109574.1 256371750 8323026 983626..983904 1 NC_013124.1 PFAM: SirA family protein; KEGG: sso:SSO8861 hypothetical protein; SirA family protein 983904 8323026 Afer_0962 Acidimicrobium ferrooxidans DSM 10331 SirA family protein YP_003109574.1 983626 D 525909 CDS YP_003109575.1 256371751 8323027 984162..984545 1 NC_013124.1 PFAM: DsrE family protein; KEGG: afu:AF0187 hypothetical protein; DsrE family protein 984545 8323027 Afer_0963 Acidimicrobium ferrooxidans DSM 10331 DsrE family protein YP_003109575.1 984162 D 525909 CDS YP_003109576.1 256371752 8323028 984545..985264 1 NC_013124.1 KEGG: cts:Ctha_0138 hypothetical protein; hypothetical protein 985264 8323028 Afer_0964 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109576.1 984545 D 525909 CDS YP_003109577.1 256371753 8323029 985261..986451 1 NC_013124.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: cts:Ctha_0137 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein 986451 8323029 Afer_0965 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109577.1 985261 D 525909 CDS YP_003109578.1 256371754 8323030 986461..987516 1 NC_013124.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: cts:Ctha_0136 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 987516 8323030 Afer_0966 Acidimicrobium ferrooxidans DSM 10331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003109578.1 986461 D 525909 CDS YP_003109579.1 256371755 8323031 987513..988205 1 NC_013124.1 KEGG: cts:Ctha_0134 hypothetical protein; hypothetical protein 988205 8323031 Afer_0967 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109579.1 987513 D 525909 CDS YP_003109580.1 256371756 8323032 988205..989518 1 NC_013124.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: cts:Ctha_0133 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein 989518 8323032 Afer_0968 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109580.1 988205 D 525909 CDS YP_003109581.1 256371757 8323033 989529..990302 1 NC_013124.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: cts:Ctha_0132 electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha/beta- subunit 990302 8323033 Afer_0969 Acidimicrobium ferrooxidans DSM 10331 Electron transfer flavoprotein alpha/beta- subunit YP_003109581.1 989529 D 525909 CDS YP_003109582.1 256371758 8323034 990314..991264 1 NC_013124.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: cts:Ctha_0131 electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha subunit 991264 8323034 Afer_0970 Acidimicrobium ferrooxidans DSM 10331 Electron transfer flavoprotein alpha subunit YP_003109582.1 990314 D 525909 CDS YP_003109583.1 256371759 8323035 991273..993444 1 NC_013124.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: bph:Bphy_5959 hypothetical protein; hypothetical protein 993444 8323035 Afer_0971 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109583.1 991273 D 525909 CDS YP_003109584.1 256371760 8323036 993441..993782 1 NC_013124.1 hypothetical protein 993782 8323036 Afer_0972 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109584.1 993441 D 525909 CDS YP_003109585.1 256371761 8323037 993881..994315 1 NC_013124.1 PFAM: glycine cleavage H-protein; KEGG: aae:aq_1657 glycine cleavage system protein H; glycine cleavage H-protein 994315 8323037 Afer_0973 Acidimicrobium ferrooxidans DSM 10331 glycine cleavage H-protein YP_003109585.1 993881 D 525909 CDS YP_003109586.1 256371762 8323038 994325..994801 1 NC_013124.1 PFAM: glycine cleavage H-protein; KEGG: aae:aq_944 glycine cleavage system protein H; glycine cleavage H-protein 994801 8323038 Afer_0974 Acidimicrobium ferrooxidans DSM 10331 glycine cleavage H-protein YP_003109586.1 994325 D 525909 CDS YP_003109587.1 256371763 8323039 complement(994826..994933) 1 NC_013124.1 hypothetical protein 994933 8323039 Afer_0975 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109587.1 994826 R 525909 CDS YP_003109588.1 256371764 8323040 995142..995633 1 NC_013124.1 KEGG: nca:Noca_2931 NADH dehydrogenase; NADH dehydrogenase 995633 8323040 Afer_0976 Acidimicrobium ferrooxidans DSM 10331 NADH dehydrogenase YP_003109588.1 995142 D 525909 CDS YP_003109589.1 256371765 8323041 995633..996271 1 NC_013124.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: stp:Strop_1655 Rieske (2Fe-2S) domain- containing protein; Rieske (2Fe-2S) domain-containing protein 996271 8323041 Afer_0977 Acidimicrobium ferrooxidans DSM 10331 Rieske (2Fe-2S) domain-containing protein YP_003109589.1 995633 D 525909 CDS YP_003109590.1 256371766 8323042 complement(998345..999175) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: amr:AM1_A0193 integrase, catalytic region; integrase catalytic subunit 999175 8323042 Afer_0978 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109590.1 998345 R 525909 CDS YP_003109591.1 256371767 8323043 complement(999194..1000072) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: amr:AM1_A0193 integrase, catalytic region; integrase catalytic subunit 1000072 8323043 Afer_0979 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109591.1 999194 R 525909 CDS YP_003109592.1 256371768 8323044 complement(1000069..1000398) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 1000398 8323044 Afer_0980 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109592.1 1000069 R 525909 CDS YP_003109593.1 256371769 8323045 complement(1000505..1000834) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 1000834 8323045 Afer_0981 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109593.1 1000505 R 525909 CDS YP_003109594.1 256371770 8323046 complement(1003367..1003645) 1 NC_013124.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: sgr:SGR_3548 CRISPR-associated Cas2 family protein; CRISPR-associated protein Cas2 1003645 8323046 Afer_0982 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated protein Cas2 YP_003109594.1 1003367 R 525909 CDS YP_003109595.1 256371771 8323047 complement(1003642..1004586) 1 NC_013124.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: saq:Sare_2578 CRISPR-associated Cas1 family protein; CRISPR-associated protein Cas1 1004586 8323047 Afer_0983 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated protein Cas1 YP_003109595.1 1003642 R 525909 CDS YP_003109596.1 256371772 8323048 complement(1004583..1005263) 1 NC_013124.1 TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: saq:Sare_2577 CRISPR-associated CSE3 family protein; CRISPR-associated protein, Cse3 family 1005263 8323048 Afer_0984 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated protein, Cse3 family YP_003109596.1 1004583 R 525909 CDS YP_003109597.1 256371773 8323049 complement(1005265..1006026) 1 NC_013124.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: fra:Francci3_0021 CRISPR-associated Cas5e family protein; CRISPR-associated protein Cas5 family 1006026 8323049 Afer_0985 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated protein Cas5 family YP_003109597.1 1005265 R 525909 CDS YP_003109598.1 256371774 8323050 complement(1006023..1007183) 1 NC_013124.1 TIGRFAM: CRISPR-associated protein, Cse4 family; KEGG: saq:Sare_2575 CRISPR-associated CSE4 family protein; CRISPR-associated protein, Cse4 family 1007183 8323050 Afer_0986 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated protein, Cse4 family YP_003109598.1 1006023 R 525909 CDS YP_003109599.1 256371775 8323051 complement(1007180..1007752) 1 NC_013124.1 TIGRFAM: CRISPR-associated protein, Cse2 family; KEGG: fra:Francci3_0019 hypothetical protein; CRISPR-associated protein, Cse2 family 1007752 8323051 Afer_0987 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated protein, Cse2 family YP_003109599.1 1007180 R 525909 CDS YP_003109600.1 256371776 8323052 complement(1007749..1009371) 1 NC_013124.1 TIGRFAM: CRISPR-associated protein, Cse1 family; KEGG: sgr:SGR_3542 CRISPR-associated helicase Cas3 family protein protein; CRISPR-associated protein, Cse1 family 1009371 8323052 Afer_0988 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated protein, Cse1 family YP_003109600.1 1007749 R 525909 CDS YP_003109601.1 256371777 8323053 complement(1009361..1012129) 1 NC_013124.1 KEGG: fal:FRAAL0452 hypothetical protein; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases; CRISPR-associated helicase Cas3 1012129 8323053 Afer_0989 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated helicase Cas3 YP_003109601.1 1009361 R 525909 CDS YP_003109602.1 256371778 8323054 1012347..1013483 1 NC_013124.1 KEGG: mkm:Mkms_5906 integrase, catalytic region; hypothetical protein 1013483 8323054 Afer_0990 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109602.1 1012347 D 525909 CDS YP_003109603.1 256371779 8323056 complement(1014610..1015383) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msm:MSMEG_1372 ABC transporter ATP-binding protein; ABC transporter-like protein 1015383 8323056 Afer_0992 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109603.1 1014610 R 525909 CDS YP_003109604.1 256371780 8323057 complement(1015380..1016426) 1 NC_013124.1 PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0947 inner-membrane translocator; Monosaccharide-transporting ATPase 1016426 8323057 Afer_0993 Acidimicrobium ferrooxidans DSM 10331 Monosaccharide-transporting ATPase YP_003109604.1 1015380 R 525909 CDS YP_003109605.1 256371781 8323058 complement(1016522..1017571) 1 NC_013124.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: acr:Acry_1366 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 1017571 8323058 Afer_0994 Acidimicrobium ferrooxidans DSM 10331 periplasmic binding protein/LacI transcriptional regulator YP_003109605.1 1016522 R 525909 CDS YP_003109606.1 256371782 8323059 complement(1017650..1018699) 1 NC_013124.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: cmi:CMM_2841 LacI family transcriptional regulator; LacI family transcriptional regulator 1018699 8323059 Afer_0995 Acidimicrobium ferrooxidans DSM 10331 LacI family transcriptional regulator YP_003109606.1 1017650 R 525909 CDS YP_003109607.1 256371783 8323060 complement(1018822..1019718) 1 NC_013124.1 PFAM: PfkB domain protein; KEGG: saq:Sare_3490 ribokinase-like domain- containing protein; PfkB domain-containing protein 1019718 8323060 Afer_0996 Acidimicrobium ferrooxidans DSM 10331 PfkB domain-containing protein YP_003109607.1 1018822 R 525909 CDS YP_003109608.1 256371784 8323061 complement(1019748..1019963) 1 NC_013124.1 KEGG: nca:Noca_4428 oxidoreductase; oxidoreductase 1019963 8323061 Afer_0997 Acidimicrobium ferrooxidans DSM 10331 oxidoreductase YP_003109608.1 1019748 R 525909 CDS YP_003109609.1 256371785 8323062 complement(1019956..1021182) 1 NC_013124.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: sco:SCP1.160c oxidoreductase; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit 1021182 8323062 Afer_0998 Acidimicrobium ferrooxidans DSM 10331 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_003109609.1 1019956 R 525909 CDS YP_003109610.1 256371786 8323063 complement(1021179..1022285) 1 NC_013124.1 KEGG: nca:Noca_3830 ferric reductase domain- containing protein; hypothetical protein 1022285 8323063 Afer_0999 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109610.1 1021179 R 525909 CDS YP_003109611.1 256371787 8323064 complement(1022279..1023145) 1 NC_013124.1 PFAM: ApbE family lipoprotein; KEGG: fal:FRAAL3949 thiamine biosynthesis lipoprotein, ApbE-like; ApbE family lipoprotein 1023145 8323064 Afer_1000 Acidimicrobium ferrooxidans DSM 10331 ApbE family lipoprotein YP_003109611.1 1022279 R 525909 CDS YP_003109612.1 256371788 8323065 complement(1023147..1023431) 1 NC_013124.1 KEGG: K11245 mating pheromone-induced death protein 2; hypothetical protein 1023431 8323065 Afer_1001 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109612.1 1023147 R 525909 CDS YP_003109613.1 256371789 8323066 complement(1023549..1024637) 1 NC_013124.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: cts:Ctha_0125 biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 1024637 8323066 Afer_1002 Acidimicrobium ferrooxidans DSM 10331 biotin/lipoate A/B protein ligase YP_003109613.1 1023549 R 525909 CDS YP_003109614.1 256371790 8323067 complement(1024634..1025968) 1 NC_013124.1 PFAM: cell cycle protein; KEGG: fal:FRAAL6752 cell division protein FtsW; cell cycle protein 1025968 8323067 Afer_1003 Acidimicrobium ferrooxidans DSM 10331 cell cycle protein YP_003109614.1 1024634 R 525909 CDS YP_003109615.1 256371791 8323068 1026092..1028161 1 NC_013124.1 PFAM: Polyphosphate kinase; KEGG: saq:Sare_1153 polyphosphate kinase; polyphosphate kinase 1028161 8323068 Afer_1004 Acidimicrobium ferrooxidans DSM 10331 polyphosphate kinase YP_003109615.1 1026092 D 525909 CDS YP_003109616.1 256371792 8323069 1028158..1028853 1 NC_013124.1 PFAM: adenylate cyclase; KEGG: sma:SAV_5460 hypothetical protein; adenylate cyclase 1028853 8323069 Afer_1005 Acidimicrobium ferrooxidans DSM 10331 adenylate cyclase YP_003109616.1 1028158 D 525909 CDS YP_003109617.1 256371793 8323070 1028841..1030415 1 NC_013124.1 PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; KEGG: gfo:GFO_3499 exopolyphosphatase; Ppx/GppA phosphatase 1030415 8323070 Afer_1006 Acidimicrobium ferrooxidans DSM 10331 Ppx/GppA phosphatase YP_003109617.1 1028841 D 525909 CDS YP_003109618.1 256371794 8323071 complement(1030439..1031776) 1 NC_013124.1 PFAM: FAD linked oxidase domain protein; KEGG: mmi:MMAR_0388 oxidoreductase; FAD linked oxidase domain-containing protein 1031776 8323071 Afer_1007 Acidimicrobium ferrooxidans DSM 10331 FAD linked oxidase domain-containing protein YP_003109618.1 1030439 R 525909 CDS YP_003109619.1 256371795 8323072 1031982..1033643 1 NC_013124.1 PFAM: phosphoglucose isomerase (PGI); KEGG: nfa:nfa49980 glucose-6-phosphate isomerase; Glucose-6-phosphate isomerase 1033643 8323072 Afer_1008 Acidimicrobium ferrooxidans DSM 10331 Glucose-6-phosphate isomerase YP_003109619.1 1031982 D 525909 CDS YP_003109620.1 256371796 8323073 1033640..1034713 1 NC_013124.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 1034713 8323073 Afer_1009 Acidimicrobium ferrooxidans DSM 10331 transaldolase YP_003109620.1 1033640 D 525909 CDS YP_003109621.1 256371797 8323074 1034710..1035699 1 NC_013124.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dsh:Dshi_2319 quinone oxidoreductase YhdH/YhfP; quinone oxidoreductase, YhdH/YhfP family 1035699 8323074 Afer_1010 Acidimicrobium ferrooxidans DSM 10331 quinone oxidoreductase, YhdH/YhfP family YP_003109621.1 1034710 D 525909 CDS YP_003109622.1 256371798 8323075 1035703..1036317 1 NC_013124.1 TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; KEGG: cdi:DIP1152 dephospho-CoA kinase; dephospho-CoA kinase 1036317 8323075 Afer_1011 Acidimicrobium ferrooxidans DSM 10331 dephospho-CoA kinase YP_003109622.1 1035703 D 525909 CDS YP_003109623.1 256371799 8323076 1036342..1037199 1 NC_013124.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: dar:Daro_1978 HDIG; signal transduction protein 1037199 8323076 Afer_1012 Acidimicrobium ferrooxidans DSM 10331 signal transduction protein YP_003109623.1 1036342 D 525909 CDS YP_003109624.1 256371800 8323077 1037212..1039215 1 NC_013124.1 KEGG: chy:CHY_0258 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; SMART: DEAD-like helicases ; helicase domain protein; excinuclease ABC subunit B 1039215 8323077 Afer_1013 Acidimicrobium ferrooxidans DSM 10331 excinuclease ABC subunit B YP_003109624.1 1037212 D 525909 CDS YP_003109625.1 256371801 8323078 1039302..1040666 1 NC_013124.1 PFAM: beta-lactamase domain protein; KEGG: nca:Noca_2937 beta-lactamase domain- containing protein; beta-lactamase domain-containing protein 1040666 8323078 Afer_1014 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase domain-containing protein YP_003109625.1 1039302 D 525909 CDS YP_003109626.1 256371802 8323079 1040709..1041209 1 NC_013124.1 KEGG: rxy:Rxyl_1675 carbohydrate kinase, FGGY; hypothetical protein 1041209 8323079 Afer_1015 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109626.1 1040709 D 525909 CDS YP_003109627.1 256371803 8323080 complement(1041191..1041532) 1 NC_013124.1 PFAM: Domain of unknown function DUF1791; KEGG: aau:AAur_pTC10239 hypothetical protein; hypothetical protein 1041532 8323080 Afer_1016 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109627.1 1041191 R 525909 CDS YP_003109628.1 256371804 8323081 complement(1041529..1042020) 1 NC_013124.1 KEGG: ace:Acel_0440 hypothetical protein; hypothetical protein 1042020 8323081 Afer_1017 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109628.1 1041529 R 525909 CDS YP_003109629.1 256371805 8323082 1042229..1043167 1 NC_013124.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: sen:SACE_5693 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1043167 8323082 Afer_1018 Acidimicrobium ferrooxidans DSM 10331 NAD-dependent epimerase/dehydratase YP_003109629.1 1042229 D 525909 CDS YP_003109630.1 256371806 8323083 complement(1043463..1044311) 1 NC_013124.1 KEGG: cau:Caur_3200 uncharacterized component of anaerobic dehydrogenase-like protein; hypothetical protein 1044311 8323083 Afer_1019 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109630.1 1043463 R 525909 CDS YP_003109631.1 256371807 8323084 complement(1044292..1047225) 1 NC_013124.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: cau:Caur_3201 nitrate reductase; molydopterin dinucleotide-binding subunit 1047225 8323084 Afer_1020 Acidimicrobium ferrooxidans DSM 10331 molydopterin dinucleotide-binding subunit YP_003109631.1 1044292 R 525909 CDS YP_003109632.1 256371808 8323085 complement(1047246..1048784) 1 NC_013124.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Polysulphide reductase NrfD; KEGG: nca:Noca_2933 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1048784 8323085 Afer_1021 Acidimicrobium ferrooxidans DSM 10331 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003109632.1 1047246 R 525909 CDS YP_003109633.1 256371809 8323086 complement(1049066..1049311) 1 NC_013124.1 KEGG: ajs:Ajs_3417 hypothetical protein; hypothetical protein 1049311 8323086 Afer_1022 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109633.1 1049066 R 525909 CDS YP_003109634.1 256371810 8323087 complement(1049398..1051941) 1 NC_013124.1 KEGG: afw:Anae109_1828 hypothetical protein; hypothetical protein 1051941 8323087 Afer_1023 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109634.1 1049398 R 525909 CDS YP_003109635.1 256371811 8323088 complement(1051923..1052729) 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: ace:Acel_0441 glycosyl transferase family protein; family 2 glycosyl transferase 1052729 8323088 Afer_1024 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003109635.1 1051923 R 525909 CDS YP_003109636.1 256371812 8323089 1053128..1057123 1 NC_013124.1 KEGG: ace:Acel_1476 vitamin B12-dependent ribonucleotide reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase class II vitamin B12- dependent; ribonucleotide reductase large subunit; SMART: Hedgehog/intein hint domain protein; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 1057123 8323089 Afer_1025 Acidimicrobium ferrooxidans DSM 10331 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_003109636.1 1053128 D 525909 CDS YP_003109637.1 256371813 8323090 1057527..1059215 1 NC_013124.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerization region; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: cef:CE0339 pyridine nucleotide- disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1059215 8323090 Afer_1026 Acidimicrobium ferrooxidans DSM 10331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003109637.1 1057527 D 525909 CDS YP_003109638.1 256371814 8323091 complement(1059265..1060884) 1 NC_013124.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpi:Rpic_0109 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1060884 8323091 Afer_1027 Acidimicrobium ferrooxidans DSM 10331 AMP-dependent synthetase and ligase YP_003109638.1 1059265 R 525909 CDS YP_003109639.1 256371815 8323092 complement(1061064..1061666) 1 NC_013124.1 PFAM: regulatory protein TetR; KEGG: nca:Noca_4111 regulatory protein, TetR; TetR family transcriptional regulator 1061666 8323092 Afer_1028 Acidimicrobium ferrooxidans DSM 10331 TetR family transcriptional regulator YP_003109639.1 1061064 R 525909 CDS YP_003109640.1 256371816 8323093 1061852..1062997 1 NC_013124.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mab:MAB_1851 acyl-CoA dehydrogenase FadE; acyl-CoA dehydrogenase domain-containing protein 1062997 8323093 Afer_1029 Acidimicrobium ferrooxidans DSM 10331 acyl-CoA dehydrogenase domain-containing protein YP_003109640.1 1061852 D 525909 CDS YP_003109641.1 256371817 8323094 1062994..1063803 1 NC_013124.1 KEGG: sen:SACE_3125 hypothetical protein; hypothetical protein 1063803 8323094 Afer_1030 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109641.1 1062994 D 525909 CDS YP_003109642.1 256371818 8323095 1063807..1065450 1 NC_013124.1 PFAM: carboxyl transferase; KEGG: stp:Strop_4327 propionyl-CoA carboxylase; Propionyl-CoA carboxylase 1065450 8323095 Afer_1031 Acidimicrobium ferrooxidans DSM 10331 Propionyl-CoA carboxylase YP_003109642.1 1063807 D 525909 CDS YP_003109643.1 256371819 8323096 1065447..1067387 1 NC_013124.1 PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: fal:FRAAL1668 acetyl-/propionyl-coenzyme A carboxylase alpha chain; carbamoyl-phosphate synthase L chain ATP- binding 1067387 8323096 Afer_1032 Acidimicrobium ferrooxidans DSM 10331 carbamoyl-phosphate synthase L chain ATP- binding YP_003109643.1 1065447 D 525909 CDS YP_003109644.1 256371820 8323097 1067388..1069154 1 NC_013124.1 PFAM: protein of unknown function DUF1446; KEGG: mjl:Mjls_3217 hypothetical protein; hypothetical protein 1069154 8323097 Afer_1033 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109644.1 1067388 D 525909 CDS YP_003109645.1 256371821 8323098 1069151..1069939 1 NC_013124.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_3459 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1069939 8323098 Afer_1034 Acidimicrobium ferrooxidans DSM 10331 enoyl-CoA hydratase/isomerase YP_003109645.1 1069151 D 525909 CDS YP_003109646.1 256371822 8323099 1070303..1071736 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: acr:Acry_0648 amino acid permease-associated region; amino acid permease-associated protein 1071736 8323099 Afer_1035 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003109646.1 1070303 D 525909 CDS YP_003109647.1 256371823 8323100 complement(1071821..1073839) 1 NC_013124.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: sma:SAV_5831 multidrug-efflux transporter; EmrB/QacA subfamily drug resistance transporter 1073839 8323100 Afer_1036 Acidimicrobium ferrooxidans DSM 10331 EmrB/QacA subfamily drug resistance transporter YP_003109647.1 1071821 R 525909 CDS YP_003109648.1 256371824 8323101 complement(1073836..1074360) 1 NC_013124.1 PFAM: regulatory protein MarR; regulatory protein ArsR; SMART: regulatory protein MarR; KEGG: rsa:RSal33209_0720 MarR family transcriptional regulator; MarR family transcriptional regulator 1074360 8323101 Afer_1037 Acidimicrobium ferrooxidans DSM 10331 MarR family transcriptional regulator YP_003109648.1 1073836 R 525909 CDS YP_003109649.1 256371825 8323102 1074603..1075166 1 NC_013124.1 PFAM: PEBP family protein; KEGG: mpo:Mpop_0898 PEBP family protein; PEBP family protein 1075166 8323102 Afer_1038 Acidimicrobium ferrooxidans DSM 10331 PEBP family protein YP_003109649.1 1074603 D 525909 CDS YP_003109650.1 256371826 8323103 complement(1075206..1076567) 1 NC_013124.1 PFAM: Chloride channel core; KEGG: rha:RHA1_ro05905 chloride channel transporter; Chloride channel core 1076567 8323103 Afer_1039 Acidimicrobium ferrooxidans DSM 10331 Chloride channel core YP_003109650.1 1075206 R 525909 CDS YP_003109651.1 256371827 8323104 complement(1076665..1077324) 1 NC_013124.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: ace:Acel_0040 TetR family transcriptional regulator; regulatory protein TetR 1077324 8323104 Afer_1040 Acidimicrobium ferrooxidans DSM 10331 regulatory protein TetR YP_003109651.1 1076665 R 525909 CDS YP_003109652.1 256371828 8323105 complement(1077491..1078867) 1 NC_013124.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: sen:SACE_5887 L-lactate dehydrogenase; L-lactate dehydrogenase (cytochrome) 1078867 8323105 Afer_1041 Acidimicrobium ferrooxidans DSM 10331 L-lactate dehydrogenase (cytochrome) YP_003109652.1 1077491 R 525909 CDS YP_003109653.1 256371829 8323106 complement(1078900..1079178) 1 NC_013124.1 hypothetical protein 1079178 8323106 Afer_1042 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109653.1 1078900 R 525909 CDS YP_003109654.1 256371830 8323107 complement(1079347..1080111) 1 NC_013124.1 KEGG: cau:Caur_0271 ABC-2 type transporter; ABC-2 type transporter 1080111 8323107 Afer_1043 Acidimicrobium ferrooxidans DSM 10331 ABC-2 type transporter YP_003109654.1 1079347 R 525909 CDS YP_003109655.1 256371831 8323108 complement(1080108..1081103) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4617 ABC transporter related; ABC transporter-like protein 1081103 8323108 Afer_1044 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109655.1 1080108 R 525909 CDS YP_003109656.1 256371832 8323109 1081290..1081400 1 NC_013124.1 hypothetical protein 1081400 8323109 Afer_1045 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109656.1 1081290 D 525909 CDS YP_003109657.1 256371833 8323110 complement(1081552..1083783) 1 NC_013124.1 KEGG: spv:SPH_1885 cell wall surface anchor family protein; hypothetical protein 1083783 8323110 Afer_1046 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109657.1 1081552 R 525909 CDS YP_003109658.1 256371834 8323113 1084894..1086231 1 NC_013124.1 hypothetical protein 1086231 8323113 Afer_1049 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109658.1 1084894 D 525909 CDS YP_003109659.1 256371835 8323115 1086673..1087668 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: rha:RHA1_ro11026 transposase; integrase catalytic subunit 1087668 8323115 Afer_1051 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109659.1 1086673 D 525909 CDS YP_003109660.1 256371836 8323116 complement(1088132..1089232) 1 NC_013124.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cts:Ctha_0126 radical SAM domain protein; Radical SAM domain-containing protein 1089232 8323116 Afer_1052 Acidimicrobium ferrooxidans DSM 10331 Radical SAM domain-containing protein YP_003109660.1 1088132 R 525909 CDS YP_003109661.1 256371837 8323117 complement(1089229..1090302) 1 NC_013124.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: cts:Ctha_0128 biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 1090302 8323117 Afer_1053 Acidimicrobium ferrooxidans DSM 10331 biotin/lipoate A/B protein ligase YP_003109661.1 1089229 R 525909 CDS YP_003109662.1 256371838 8323118 complement(1090299..1091270) 1 NC_013124.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cts:Ctha_0127 radical SAM domain protein; Radical SAM domain-containing protein 1091270 8323118 Afer_1054 Acidimicrobium ferrooxidans DSM 10331 Radical SAM domain-containing protein YP_003109662.1 1090299 R 525909 CDS YP_003109663.1 256371839 8323119 complement(1091270..1091713) 1 NC_013124.1 PFAM: glycine cleavage H-protein; KEGG: sto:ST1894 glycine cleavage system H protein; glycine cleavage H-protein 1091713 8323119 Afer_1055 Acidimicrobium ferrooxidans DSM 10331 glycine cleavage H-protein YP_003109663.1 1091270 R 525909 CDS YP_003109664.1 256371840 8323120 complement(1091685..1092764) 1 NC_013124.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: cts:Ctha_0125 biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 1092764 8323120 Afer_1056 Acidimicrobium ferrooxidans DSM 10331 biotin/lipoate A/B protein ligase YP_003109664.1 1091685 R 525909 CDS YP_003109665.1 256371841 8323121 1092910..1093650 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gtn:GTNG_0470 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 1093650 8323121 Afer_1057 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003109665.1 1092910 D 525909 CDS YP_003109666.1 256371842 8323122 1094217..1097450 1 NC_013124.1 PFAM: protein of unknown function DUF214; KEGG: nca:Noca_2867 hypothetical protein; hypothetical protein 1097450 8323122 Afer_1058 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109666.1 1094217 D 525909 CDS YP_003109667.1 256371843 8323123 1097447..1098298 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_2866 ABC transporter related; ABC transporter-like protein 1098298 8323123 Afer_1059 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109667.1 1097447 D 525909 CDS YP_003109668.1 256371844 8323124 1098295..1098987 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_3233 ABC-transporter ATP- binding protein; ABC transporter-like protein 1098987 8323124 Afer_1060 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109668.1 1098295 D 525909 CDS YP_003109669.1 256371845 8323125 complement(1098992..1100473) 1 NC_013124.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1162 multidrug resistance protein; EmrB/QacA subfamily drug resistance transporter 1100473 8323125 Afer_1061 Acidimicrobium ferrooxidans DSM 10331 EmrB/QacA subfamily drug resistance transporter YP_003109669.1 1098992 R 525909 CDS YP_003109670.1 256371846 8323127 1101669..1102940 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: sgr:SGR_3045 major facilitator superfamily permease; major facilitator superfamily protein 1102940 8323127 Afer_1062 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109670.1 1101669 D 525909 CDS YP_003109671.1 256371847 8323128 1103041..1103385 1 NC_013124.1 KEGG: ooe:OEOE_0191 hypothetical protein; hypothetical protein 1103385 8323128 Afer_1063 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109671.1 1103041 D 525909 CDS YP_003109672.1 256371848 8323129 1103495..1104931 1 NC_013124.1 PFAM: protein of unknown function DUF1212; KEGG: rha:RHA1_ro04718 amino acid export carrier protein; hypothetical protein 1104931 8323129 Afer_1064 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109672.1 1103495 D 525909 CDS YP_003109673.1 256371849 8323130 1105109..1106323 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: nca:Noca_3966 major facilitator transporter; major facilitator superfamily protein 1106323 8323130 Afer_1065 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109673.1 1105109 D 525909 CDS YP_003109674.1 256371850 8323131 complement(1106342..1107205) 1 NC_013124.1 hypothetical protein 1107205 8323131 Afer_1066 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109674.1 1106342 R 525909 CDS YP_003109675.1 256371851 8323132 complement(1107202..1108083) 1 NC_013124.1 KEGG: fre:Franean1_0904 hypothetical protein; hypothetical protein 1108083 8323132 Afer_1067 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109675.1 1107202 R 525909 CDS YP_003109676.1 256371852 8323133 complement(1108080..1109081) 1 NC_013124.1 PFAM: aminoglycoside phosphotransferase; KEGG: azc:AZC_2708 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1109081 8323133 Afer_1068 Acidimicrobium ferrooxidans DSM 10331 aminoglycoside phosphotransferase YP_003109676.1 1108080 R 525909 CDS YP_003109677.1 256371853 8323134 1109129..1109830 1 NC_013124.1 KEGG: scl:sce5793 hypothetical protein; hypothetical protein 1109830 8323134 Afer_1069 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109677.1 1109129 D 525909 CDS YP_003109678.1 256371854 8323135 1109911..1110840 1 NC_013124.1 PFAM: peptidase T2 asparaginase 2; KEGG: rca:Rcas_4430 asparaginase; Asparaginase 1110840 8323135 Afer_1070 Acidimicrobium ferrooxidans DSM 10331 Asparaginase YP_003109678.1 1109911 D 525909 CDS YP_003109679.1 256371855 8323136 1110869..1112392 1 NC_013124.1 PFAM: Peptidase S53 propeptide; KEGG: bph:Bphy_5054 peptidase S53 propeptide; peptidase S53 propeptide 1112392 8323136 Afer_1071 Acidimicrobium ferrooxidans DSM 10331 peptidase S53 propeptide YP_003109679.1 1110869 D 525909 CDS YP_003109680.1 256371856 8323137 complement(1112482..1112889) 1 NC_013124.1 PFAM: OsmC family protein; KEGG: rha:RHA1_ro05070 hypothetical protein; OsmC family protein 1112889 8323137 Afer_1072 Acidimicrobium ferrooxidans DSM 10331 OsmC family protein YP_003109680.1 1112482 R 525909 CDS YP_003109681.1 256371857 8323138 1113015..1113476 1 NC_013124.1 KEGG: ppg:PputGB1_0814 hypothetical protein; hypothetical protein 1113476 8323138 Afer_1073 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109681.1 1113015 D 525909 CDS YP_003109682.1 256371858 8323144 1118886..1119404 1 NC_013124.1 KEGG: fra:Francci3_1316 hypothetical protein; hypothetical protein 1119404 8323144 Afer_1075 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109682.1 1118886 D 525909 CDS YP_003109683.1 256371859 8323145 complement(1119374..1120192) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pac:PPA1530 ABC transporter ATP-binding protein; ABC transporter-like protein 1120192 8323145 Afer_1076 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109683.1 1119374 R 525909 CDS YP_003109684.1 256371860 8323146 complement(1120213..1120623) 1 NC_013124.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sco:SCO5851 integral membrane protein; hypothetical protein 1120623 8323146 Afer_1077 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109684.1 1120213 R 525909 CDS YP_003109685.1 256371861 8323147 1120705..1121694 1 NC_013124.1 KEGG: azo:azo2612 GAF/GGDEF-domain containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1121694 8323147 Afer_1078 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase YP_003109685.1 1120705 D 525909 CDS YP_003109686.1 256371862 8323148 complement(1121926..1123209) 1 NC_013124.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: saq:Sare_3369 30S ribosomal protein S1; RNA binding S1 domain-containing protein 1123209 8323148 Afer_1079 Acidimicrobium ferrooxidans DSM 10331 RNA binding S1 domain-containing protein YP_003109686.1 1121926 R 525909 CDS YP_003109687.1 256371863 8323149 complement(1123306..1125966) 1 NC_013124.1 KEGG: mtf:TBFG_11645 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; Helix-hairpin-helix domain protein class 2; DNA polymerase I 1125966 8323149 Afer_1080 Acidimicrobium ferrooxidans DSM 10331 DNA polymerase I YP_003109687.1 1123306 R 525909 CDS YP_003109688.1 256371864 8323150 complement(1125935..1126546) 1 NC_013124.1 PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver; KEGG: fre:Franean1_2035 response regulator receiver/ANTAR domain-containing protein; response regulator receiver and ANTAR domain-containing protein 1126546 8323150 Afer_1081 Acidimicrobium ferrooxidans DSM 10331 response regulator receiver and ANTAR domain-containing protein YP_003109688.1 1125935 R 525909 CDS YP_003109689.1 256371865 8323151 1126622..1127290 1 NC_013124.1 PFAM: beta-lactamase domain protein; KEGG: saq:Sare_1808 beta-lactamase domain- containing protein; beta-lactamase domain-containing protein 1127290 8323151 Afer_1082 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase domain-containing protein YP_003109689.1 1126622 D 525909 CDS YP_003109690.1 256371866 8323154 complement(1129004..1130389) 1 NC_013124.1 PFAM: FAD linked oxidase domain protein; molybdopterin dehydrogenase FAD-binding; KEGG: mtf:TBFG_12303 dehydrogenase; FAD linked oxidase domain-containing protein 1130389 8323154 Afer_1084 Acidimicrobium ferrooxidans DSM 10331 FAD linked oxidase domain-containing protein YP_003109690.1 1129004 R 525909 CDS YP_003109691.1 256371867 8323155 1130777..1132015 1 NC_013124.1 PFAM: Acyl transferase; KEGG: bsu:BSU15900 acyl-carrier-protein S- malonyltransferase; acyl transferase 1132015 8323155 Afer_1085 Acidimicrobium ferrooxidans DSM 10331 acyl transferase YP_003109691.1 1130777 D 525909 CDS YP_003109692.1 256371868 8323156 1132024..1132944 1 NC_013124.1 KEGG: dau:Daud_0639 3-oxoacyl-(acyl-carrier- protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1132944 8323156 Afer_1086 Acidimicrobium ferrooxidans DSM 10331 3-oxoacyl-(acyl-carrier-protein) synthase III YP_003109692.1 1132024 D 525909 CDS YP_003109693.1 256371869 8323157 1132941..1133660 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ace:Acel_1151 3-oxoacyl-[acyl-carrier- protein] reductase; short-chain dehydrogenase/reductase SDR 1133660 8323157 Afer_1087 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003109693.1 1132941 D 525909 CDS YP_003109694.1 256371870 8323158 1133768..1134010 1 NC_013124.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: syn:ssl2084 acyl carrier protein; acyl carrier protein 1134010 8323158 Afer_1088 Acidimicrobium ferrooxidans DSM 10331 acyl carrier protein YP_003109694.1 1133768 D 525909 CDS YP_003109695.1 256371871 8323159 1134007..1135212 1 NC_013124.1 PFAM: Beta-ketoacyl synthase; KEGG: drm:Dred_2070 beta-ketoacyl synthase; beta-ketoacyl synthase 1135212 8323159 Afer_1089 Acidimicrobium ferrooxidans DSM 10331 beta-ketoacyl synthase YP_003109695.1 1134007 D 525909 CDS YP_003109696.1 256371872 8323160 complement(1135170..1135403) 1 NC_013124.1 hypothetical protein 1135403 8323160 Afer_1090 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109696.1 1135170 R 525909 CDS YP_003109697.1 256371873 8323161 complement(1135482..1137038) 1 NC_013124.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: nfa:nfa26120 oxidoreductase; glucose-methanol-choline oxidoreductase 1137038 8323161 Afer_1091 Acidimicrobium ferrooxidans DSM 10331 glucose-methanol-choline oxidoreductase YP_003109697.1 1135482 R 525909 CDS YP_003109698.1 256371874 8323162 complement(1137048..1138727) 1 NC_013124.1 PFAM: ABC-1 domain protein; aminoglycoside phosphotransferase; KEGG: mab:MAB_2393c hypothetical protein; ABC-1 domain-containing protein 1138727 8323162 Afer_1092 Acidimicrobium ferrooxidans DSM 10331 ABC-1 domain-containing protein YP_003109698.1 1137048 R 525909 CDS YP_003109699.1 256371875 8323163 complement(1138708..1139721) 1 NC_013124.1 KEGG: bxe:Bxe_B1341 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase 1139721 8323163 Afer_1093 Acidimicrobium ferrooxidans DSM 10331 6-phosphogluconate dehydrogenase YP_003109699.1 1138708 R 525909 CDS YP_003109700.1 256371876 8323164 complement(1139745..1140554) 1 NC_013124.1 KEGG: fal:FRAAL4682 tryptophan synthase, alpha protein; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 1140554 8323164 Afer_1094 Acidimicrobium ferrooxidans DSM 10331 tryptophan synthase subunit alpha YP_003109700.1 1139745 R 525909 CDS YP_003109701.1 256371877 8323165 complement(1140551..1141738) 1 NC_013124.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1141738 8323165 Afer_1095 Acidimicrobium ferrooxidans DSM 10331 tryptophan synthase subunit beta YP_003109701.1 1140551 R 525909 CDS YP_003109702.1 256371878 8323166 complement(1141719..1142360) 1 NC_013124.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: dau:Daud_1187 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 1142360 8323166 Afer_1096 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylanthranilate isomerase YP_003109702.1 1141719 R 525909 CDS YP_003109703.1 256371879 8323167 complement(1142323..1143138) 1 NC_013124.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: bvu:BVU_4091 indole-3-glycerol-phosphate synthase; Indole-3-glycerol-phosphate synthase 1143138 8323167 Afer_1097 Acidimicrobium ferrooxidans DSM 10331 Indole-3-glycerol-phosphate synthase YP_003109703.1 1142323 R 525909 CDS YP_003109704.1 256371880 8323168 1143309..1145084 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: fal:FRAAL4785 mutidrug efflux permease; major facilitator superfamily protein 1145084 8323168 Afer_1098 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109704.1 1143309 D 525909 CDS YP_003109705.1 256371881 8323169 1145125..1145802 1 NC_013124.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: fre:Franean1_6145 two component transcriptional regulator; winged helix family two component transcriptional regulator 1145802 8323169 Afer_1099 Acidimicrobium ferrooxidans DSM 10331 winged helix family two component transcriptional regulator YP_003109705.1 1145125 D 525909 CDS YP_003109706.1 256371882 8323170 1145804..1147189 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bha:BH1945 two-component sensor histidine kinase; histidine kinase 1147189 8323170 Afer_1100 Acidimicrobium ferrooxidans DSM 10331 histidine kinase YP_003109706.1 1145804 D 525909 CDS YP_003109707.1 256371883 8323171 complement(1147145..1150423) 1 NC_013124.1 KEGG: saq:Sare_1110 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase 1150423 8323171 Afer_1101 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase/phosphodiesterase YP_003109707.1 1147145 R 525909 CDS YP_003109708.1 256371884 8323172 1150478..1151302 1 NC_013124.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: ade:Adeh_2848 LigA; folate-binding protein YgfZ 1151302 8323172 Afer_1102 Acidimicrobium ferrooxidans DSM 10331 folate-binding protein YgfZ YP_003109708.1 1150478 D 525909 CDS YP_003109709.1 256371885 8323173 complement(1151433..1152920) 1 NC_013124.1 PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: sco:SCO2043 anthranilate synthase component I; Anthranilate synthase 1152920 8323173 Afer_1103 Acidimicrobium ferrooxidans DSM 10331 Anthranilate synthase YP_003109709.1 1151433 R 525909 CDS YP_003109710.1 256371886 8323174 complement(1152917..1153279) 1 NC_013124.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: swo:Swol_1764 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; phosphoribosyl-AMP cyclohydrolase 1153279 8323174 Afer_1104 Acidimicrobium ferrooxidans DSM 10331 phosphoribosyl-AMP cyclohydrolase YP_003109710.1 1152917 R 525909 CDS YP_003109711.1 256371887 8323175 complement(1153276..1153596) 1 NC_013124.1 PFAM: chaperonin Cpn10; KEGG: ace:Acel_1680 chaperonin Cpn10; chaperonin Cpn10 1153596 8323175 Afer_1105 Acidimicrobium ferrooxidans DSM 10331 chaperonin Cpn10 YP_003109711.1 1153276 R 525909 CDS YP_003109712.1 256371888 8323176 complement(1153619..1154383) 1 NC_013124.1 KEGG: gdj:Gdia_1623 imidazoleglycerol phosphate synthase, cyclase subunit; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; imidazoleglycerol phosphate synthase, cyclase subunit 1154383 8323176 Afer_1106 Acidimicrobium ferrooxidans DSM 10331 imidazoleglycerol phosphate synthase, cyclase subunit YP_003109712.1 1153619 R 525909 CDS YP_003109713.1 256371889 8323177 complement(1154371..1155111) 1 NC_013124.1 PFAM: histidine biosynthesis protein; KEGG: mta:Moth_2032 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase; histidine biosynthesis protein 1155111 8323177 Afer_1107 Acidimicrobium ferrooxidans DSM 10331 histidine biosynthesis protein YP_003109713.1 1154371 R 525909 CDS YP_003109714.1 256371890 8323178 complement(1155114..1155731) 1 NC_013124.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rxy:Rxyl_1104 imidazole glycerol phosphate synthase subunit HisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1155731 8323178 Afer_1108 Acidimicrobium ferrooxidans DSM 10331 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_003109714.1 1155114 R 525909 CDS YP_003109715.1 256371891 8323179 complement(1155728..1156324) 1 NC_013124.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: tth:TTC0061 imidazoleglycerol-phosphate dehydratase; Imidazoleglycerol-phosphate dehydratase 1156324 8323179 Afer_1109 Acidimicrobium ferrooxidans DSM 10331 Imidazoleglycerol-phosphate dehydratase YP_003109715.1 1155728 R 525909 CDS YP_003109716.1 256371892 8323180 complement(1156321..1157355) 1 NC_013124.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: fra:Francci3_3026 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 1157355 8323180 Afer_1110 Acidimicrobium ferrooxidans DSM 10331 histidinol-phosphate aminotransferase YP_003109716.1 1156321 R 525909 CDS YP_003109717.1 256371893 8323181 complement(1157349..1158647) 1 NC_013124.1 KEGG: csa:Csal_2212 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase; histidinol dehydrogenase 1158647 8323181 Afer_1111 Acidimicrobium ferrooxidans DSM 10331 histidinol dehydrogenase YP_003109717.1 1157349 R 525909 CDS YP_003109718.1 256371894 8323182 1158739..1158930 1 NC_013124.1 hypothetical protein 1158930 8323182 Afer_1112 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109718.1 1158739 D 525909 CDS YP_003109719.1 256371895 8323183 1158999..1159811 1 NC_013124.1 PFAM: SNARE associated Golgi protein; KEGG: cmi:CMM_1412 hypothetical protein; hypothetical protein 1159811 8323183 Afer_1113 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109719.1 1158999 D 525909 CDS YP_003109720.1 256371896 8323184 complement(1160037..1161497) 1 NC_013124.1 KEGG: tth:TTC1611 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 1161497 8323184 Afer_1114 Acidimicrobium ferrooxidans DSM 10331 pyruvate kinase YP_003109720.1 1160037 R 525909 CDS YP_003109721.1 256371897 8323185 complement(1161524..1162033) 1 NC_013124.1 KEGG: ace:Acel_0515 hypothetical protein; hypothetical protein 1162033 8323185 Afer_1115 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109721.1 1161524 R 525909 CDS YP_003109722.1 256371898 8323186 complement(1162162..1163049) 1 NC_013124.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: tpd:Teth39_1647 hypothetical protein; hypothetical protein 1163049 8323186 Afer_1116 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109722.1 1162162 R 525909 CDS YP_003109723.1 256371899 8323187 1163076..1163585 1 NC_013124.1 KEGG: rci:RCIX2228 hypothetical protein; hypothetical protein 1163585 8323187 Afer_1117 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109723.1 1163076 D 525909 CDS YP_003109724.1 256371900 8323188 complement(1163506..1165029) 1 NC_013124.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 1165029 8323188 Afer_1118 Acidimicrobium ferrooxidans DSM 10331 glycine dehydrogenase subunit 2 YP_003109724.1 1163506 R 525909 CDS YP_003109725.1 256371901 8323189 complement(1165030..1166352) 1 NC_013124.1 PFAM: glycine cleavage system P-protein; KEGG: mta:Moth_1943 glycine dehydrogenase subunit 1; Glycine dehydrogenase 1166352 8323189 Afer_1119 Acidimicrobium ferrooxidans DSM 10331 Glycine dehydrogenase YP_003109725.1 1165030 R 525909 CDS YP_003109726.1 256371902 8323190 complement(1166370..1167419) 1 NC_013124.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mgi:Mflv_2939 glycine cleavage system aminomethyltransferase T; glycine cleavage system T protein 1167419 8323190 Afer_1120 Acidimicrobium ferrooxidans DSM 10331 glycine cleavage system T protein YP_003109726.1 1166370 R 525909 CDS YP_003109727.1 256371903 8323191 complement(1167454..1167891) 1 NC_013124.1 hypothetical protein 1167891 8323191 Afer_1121 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109727.1 1167454 R 525909 CDS YP_003109728.1 256371904 8323192 1167955..1168533 1 NC_013124.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: kra:Krad_3101 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1168533 8323192 Afer_1122 Acidimicrobium ferrooxidans DSM 10331 CDP-alcohol phosphatidyltransferase YP_003109728.1 1167955 D 525909 CDS YP_003109729.1 256371905 8323193 1168572..1171136 1 NC_013124.1 PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; KEGG: tfu:Tfu_1394 mannose-1-phosphate guanylyltransferase / phosphomannomutase; nucleotidyl transferase 1171136 8323193 Afer_1123 Acidimicrobium ferrooxidans DSM 10331 nucleotidyl transferase YP_003109729.1 1168572 D 525909 CDS YP_003109730.1 256371906 8323194 1171148..1171537 1 NC_013124.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ace:Acel_1227 glycine cleavage system H protein; glycine cleavage system H protein 1171537 8323194 Afer_1124 Acidimicrobium ferrooxidans DSM 10331 glycine cleavage system H protein YP_003109730.1 1171148 D 525909 CDS YP_003109731.1 256371907 8323195 1171534..1172028 1 NC_013124.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: ace:Acel_1226 FHA domain-containing protein; FHA domain-containing protein 1172028 8323195 Afer_1125 Acidimicrobium ferrooxidans DSM 10331 FHA domain-containing protein YP_003109731.1 1171534 D 525909 CDS YP_003109732.1 256371908 8323196 1172025..1172813 1 NC_013124.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sma:SAV_6982 hypothetical protein; MerR family transcriptional regulator 1172813 8323196 Afer_1126 Acidimicrobium ferrooxidans DSM 10331 MerR family transcriptional regulator YP_003109732.1 1172025 D 525909 CDS YP_003109733.1 256371909 8323197 complement(1172888..1173115) 1 NC_013124.1 hypothetical protein 1173115 8323197 Afer_1127 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109733.1 1172888 R 525909 CDS YP_003109734.1 256371910 8323198 complement(1173210..1173716) 1 NC_013124.1 PFAM: protein of unknown function DUF151; KEGG: tfu:Tfu_1396 hypothetical protein; hypothetical protein 1173716 8323198 Afer_1128 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109734.1 1173210 R 525909 CDS YP_003109735.1 256371911 8323199 complement(1173771..1174583) 1 NC_013124.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mgm:Mmc1_0245 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane protein 1174583 8323199 Afer_1129 Acidimicrobium ferrooxidans DSM 10331 cytochrome c biogenesis protein transmembrane protein YP_003109735.1 1173771 R 525909 CDS YP_003109736.1 256371912 8323200 1174682..1176157 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: sgr:SGR_469 major facilitator superfamily permease; major facilitator superfamily protein 1176157 8323200 Afer_1130 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109736.1 1174682 D 525909 CDS YP_003109737.1 256371913 8323201 1176227..1177210 1 NC_013124.1 KEGG: sco:SCO1215 integral membrane protein; integral membrane protein 1177210 8323201 Afer_1131 Acidimicrobium ferrooxidans DSM 10331 integral membrane protein YP_003109737.1 1176227 D 525909 CDS YP_003109738.1 256371914 8323202 complement(1177293..1178033) 1 NC_013124.1 PFAM: peptidase M50; KEGG: eli:ELI_03495 hypothetical protein; peptidase M50 1178033 8323202 Afer_1132 Acidimicrobium ferrooxidans DSM 10331 peptidase M50 YP_003109738.1 1177293 R 525909 CDS YP_003109739.1 256371915 8323203 complement(1178033..1178932) 1 NC_013124.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dau:Daud_1282 tyrosine recombinase XerD; integrase family protein 1178932 8323203 Afer_1133 Acidimicrobium ferrooxidans DSM 10331 integrase family protein YP_003109739.1 1178033 R 525909 CDS YP_003109740.1 256371916 8323204 complement(1178916..1179518) 1 NC_013124.1 PFAM: NUDIX hydrolase; KEGG: stp:Strop_1921 NUDIX hydrolase; NUDIX hydrolase 1179518 8323204 Afer_1134 Acidimicrobium ferrooxidans DSM 10331 NUDIX hydrolase YP_003109740.1 1178916 R 525909 CDS YP_003109741.1 256371917 8323205 complement(1179515..1181122) 1 NC_013124.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1181122 pyrG 8323205 pyrG Acidimicrobium ferrooxidans DSM 10331 CTP synthetase YP_003109741.1 1179515 R 525909 CDS YP_003109742.1 256371918 8323206 complement(1181168..1182775) 1 NC_013124.1 PFAM: SMC domain protein; SMART: AAA ATPase; KEGG: ttj:TTHA1525 DNA repair protein RecN; SMC domain-containing protein 1182775 8323206 Afer_1136 Acidimicrobium ferrooxidans DSM 10331 SMC domain-containing protein YP_003109742.1 1181168 R 525909 CDS YP_003109743.1 256371919 8323207 complement(1182769..1183584) 1 NC_013124.1 PFAM: ATP-NAD/AcoX kinase; KEGG: ace:Acel_1246 NAD(+) kinase; ATP-NAD/AcoX kinase 1183584 8323207 Afer_1137 Acidimicrobium ferrooxidans DSM 10331 ATP-NAD/AcoX kinase YP_003109743.1 1182769 R 525909 CDS YP_003109744.1 256371920 8323208 complement(1183595..1184344) 1 NC_013124.1 KEGG: ttj:TTHA0546 hemolysin; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein; hemolysin A 1184344 8323208 Afer_1138 Acidimicrobium ferrooxidans DSM 10331 hemolysin A YP_003109744.1 1183595 R 525909 CDS YP_003109745.1 256371921 8323209 1184385..1185014 1 NC_013124.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: sma:SAV_7489 hypothetical protein; PA-phosphatase-like phosphoesterase 1185014 8323209 Afer_1139 Acidimicrobium ferrooxidans DSM 10331 PA-phosphatase-like phosphoesterase YP_003109745.1 1184385 D 525909 CDS YP_003109746.1 256371922 8323210 complement(1184923..1186098) 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2414 major facilitator superfamily MFS_1; major facilitator superfamily protein 1186098 8323210 Afer_1140 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109746.1 1184923 R 525909 CDS YP_003109747.1 256371923 8323211 1186377..1188215 1 NC_013124.1 PFAM: extracellular solute-binding protein family 5; KEGG: saq:Sare_2145 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1188215 8323211 Afer_1141 Acidimicrobium ferrooxidans DSM 10331 family 5 extracellular solute-binding protein YP_003109747.1 1186377 D 525909 CDS YP_003109748.1 256371924 8323212 1188389..1189336 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_4337 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1189336 8323212 Afer_1142 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109748.1 1188389 D 525909 CDS YP_003109749.1 256371925 8323213 1189365..1190324 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_4338 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1190324 8323213 Afer_1143 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109749.1 1189365 D 525909 CDS YP_003109750.1 256371926 8323214 1190525..1192351 1 NC_013124.1 PFAM: extracellular solute-binding protein family 5; KEGG: saq:Sare_2145 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1192351 8323214 Afer_1144 Acidimicrobium ferrooxidans DSM 10331 family 5 extracellular solute-binding protein YP_003109750.1 1190525 D 525909 CDS YP_003109751.1 256371927 8323215 1192447..1194078 1 NC_013124.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: ace:Acel_0412 cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 1194078 8323215 Afer_1145 Acidimicrobium ferrooxidans DSM 10331 cell envelope-related transcriptional attenuator YP_003109751.1 1192447 D 525909 CDS YP_003109752.1 256371928 8323216 1194111..1195046 1 NC_013124.1 PFAM: pyruvate carboxyltransferase; KEGG: fre:Franean1_3719 pyruvate carboxyltransferase; pyruvate carboxyltransferase 1195046 8323216 Afer_1146 Acidimicrobium ferrooxidans DSM 10331 pyruvate carboxyltransferase YP_003109752.1 1194111 D 525909 CDS YP_003109753.1 256371929 8323217 complement(1195043..1197073) 1 NC_013124.1 KEGG: saq:Sare_4781 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase subunit 1197073 8323217 Afer_1147 Acidimicrobium ferrooxidans DSM 10331 oligopeptide/dipeptide ABC transporter ATPase subunit YP_003109753.1 1195043 R 525909 CDS YP_003109754.1 256371930 8323219 1197811..1198938 1 NC_013124.1 PFAM: Radical SAM domain protein; KEGG: nca:Noca_1430 radical SAM domain-containing protein; Radical SAM domain-containing protein 1198938 8323219 Afer_1148 Acidimicrobium ferrooxidans DSM 10331 Radical SAM domain-containing protein YP_003109754.1 1197811 D 525909 CDS YP_003109755.1 256371931 8323220 complement(1199120..1201084) 1 NC_013124.1 TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: mgi:Mflv_3863 acetoacetyl-CoA synthase; acetoacetyl-CoA synthase 1201084 8323220 Afer_1149 Acidimicrobium ferrooxidans DSM 10331 acetoacetyl-CoA synthase YP_003109755.1 1199120 R 525909 CDS YP_003109756.1 256371932 8323221 complement(1201074..1201277) 1 NC_013124.1 hypothetical protein 1201277 8323221 Afer_1150 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109756.1 1201074 R 525909 CDS YP_003109757.1 256371933 8323222 complement(1201302..1202960) 1 NC_013124.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sen:SACE_6960 acyl-CoA synthetase; AMP-dependent synthetase and ligase 1202960 8323222 Afer_1151 Acidimicrobium ferrooxidans DSM 10331 AMP-dependent synthetase and ligase YP_003109757.1 1201302 R 525909 CDS YP_003109758.1 256371934 8323223 1203084..1204166 1 NC_013124.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: saq:Sare_4279 glycine oxidase ThiO; glycine oxidase ThiO 1204166 8323223 Afer_1152 Acidimicrobium ferrooxidans DSM 10331 glycine oxidase ThiO YP_003109758.1 1203084 D 525909 CDS YP_003109759.1 256371935 8323224 1204163..1204369 1 NC_013124.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: stp:Strop_3887 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 1204369 8323224 Afer_1153 Acidimicrobium ferrooxidans DSM 10331 thiamine biosynthesis protein ThiS YP_003109759.1 1204163 D 525909 CDS YP_003109760.1 256371936 8323225 1204366..1205133 1 NC_013124.1 PFAM: thiazole biosynthesis family protein; KEGG: mmi:MMAR_0720 thiamin biosynthesis protein ThiG; thiazole biosynthesis family protein 1205133 8323225 Afer_1154 Acidimicrobium ferrooxidans DSM 10331 thiazole biosynthesis family protein YP_003109760.1 1204366 D 525909 CDS YP_003109761.1 256371937 8323226 1205169..1205987 1 NC_013124.1 KEGG: afw:Anae109_1765 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1205987 8323226 Afer_1155 Acidimicrobium ferrooxidans DSM 10331 phosphomethylpyrimidine kinase YP_003109761.1 1205169 D 525909 CDS YP_003109762.1 256371938 8323227 1206095..1207975 1 NC_013124.1 KEGG: afe:Lferr_2664 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase 1207975 8323227 Afer_1156 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase/phosphodiesterase YP_003109762.1 1206095 D 525909 CDS YP_003109763.1 256371939 8323228 complement(1208044..1209018) 1 NC_013124.1 PFAM: Prephenate dehydrogenase; KEGG: krh:KRH_15220 prephenate dehydrogenase; Prephenate dehydrogenase 1209018 8323228 Afer_1157 Acidimicrobium ferrooxidans DSM 10331 Prephenate dehydrogenase YP_003109763.1 1208044 R 525909 CDS YP_003109764.1 256371940 8323229 complement(1209011..1209886) 1 NC_013124.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: bvi:Bcep1808_0964 chorismate mutase / prephenate dehydratase; prephenate dehydratase 1209886 8323229 Afer_1158 Acidimicrobium ferrooxidans DSM 10331 prephenate dehydratase YP_003109764.1 1209011 R 525909 CDS YP_003109765.1 256371941 8323230 complement(1209937..1210506) 1 NC_013124.1 PFAM: NADPH-dependent FMN reductase; KEGG: hau:Haur_2685 NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase 1210506 8323230 Afer_1159 Acidimicrobium ferrooxidans DSM 10331 NADPH-dependent FMN reductase YP_003109765.1 1209937 R 525909 CDS YP_003109766.1 256371942 8323231 1210635..1211192 1 NC_013124.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: scl:sce2276 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN- binding protein 1211192 8323231 Afer_1160 Acidimicrobium ferrooxidans DSM 10331 pyridoxamine 5'-phosphate oxidase-like FMN- binding protein YP_003109766.1 1210635 D 525909 CDS YP_003109767.1 256371943 8323232 complement(1211108..1212397) 1 NC_013124.1 TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; monooxygenase FAD-binding; KEGG: fre:Franean1_5969 geranylgeranyl reductase; geranylgeranyl reductase 1212397 8323232 Afer_1161 Acidimicrobium ferrooxidans DSM 10331 geranylgeranyl reductase YP_003109767.1 1211108 R 525909 CDS YP_003109768.1 256371944 8323233 complement(1212420..1212938) 1 NC_013124.1 hypothetical protein 1212938 8323233 Afer_1162 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109768.1 1212420 R 525909 CDS YP_003109769.1 256371945 8323235 1213444..1213656 1 NC_013124.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mjl:Mjls_4497 heavy metal transport/detoxification protein; Heavy metal transport/detoxification protein 1213656 8323235 Afer_1163 Acidimicrobium ferrooxidans DSM 10331 Heavy metal transport/detoxification protein YP_003109769.1 1213444 D 525909 CDS YP_003109770.1 256371946 8323236 1213640..1215799 1 NC_013124.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ace:Acel_1652 heavy metal translocating P- type ATPase; heavy metal translocating P-type ATPase 1215799 8323236 Afer_1164 Acidimicrobium ferrooxidans DSM 10331 heavy metal translocating P-type ATPase YP_003109770.1 1213640 D 525909 CDS YP_003109771.1 256371947 8323239 1217520..1217819 1 NC_013124.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: fra:Francci3_2678 prevent-host-death protein; prevent-host-death family protein 1217819 8323239 Afer_1166 Acidimicrobium ferrooxidans DSM 10331 prevent-host-death family protein YP_003109771.1 1217520 D 525909 CDS YP_003109772.1 256371948 8323240 1217816..1218079 1 NC_013124.1 PFAM: plasmid stabilization system; KEGG: neu:NE0476 hypothetical protein; plasmid stabilization system 1218079 8323240 Afer_1167 Acidimicrobium ferrooxidans DSM 10331 plasmid stabilization system YP_003109772.1 1217816 D 525909 CDS YP_003109773.1 256371949 8323241 1218809..1219612 1 NC_013124.1 PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: mav:MAV_0854 methyltransferase-UbiE family protein; type 11 methyltransferase 1219612 8323241 Afer_1168 Acidimicrobium ferrooxidans DSM 10331 type 11 methyltransferase YP_003109773.1 1218809 D 525909 CDS YP_003109774.1 256371950 8323242 complement(1219825..1220331) 1 NC_013124.1 KEGG: efa:EF1339 hypothetical protein; hypothetical protein 1220331 8323242 Afer_1169 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109774.1 1219825 R 525909 CDS YP_003109775.1 256371951 8323243 complement(1220823..1221827) 1 NC_013124.1 KEGG: ckl:CKL_3030 hypothetical protein; hypothetical protein 1221827 8323243 Afer_1170 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109775.1 1220823 R 525909 CDS YP_003109776.1 256371952 8323244 complement(1221965..1223239) 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: mva:Mvan_5862 major facilitator superfamily transporter; major facilitator superfamily protein 1223239 8323244 Afer_1171 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109776.1 1221965 R 525909 CDS YP_003109777.1 256371953 8323245 complement(1223279..1223977) 1 NC_013124.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; Rhodanese domain protein; KEGG: rha:RHA1_ro11220 ArsR family transcriptional regulator; ArsR family transcriptional regulator 1223977 8323245 Afer_1172 Acidimicrobium ferrooxidans DSM 10331 ArsR family transcriptional regulator YP_003109777.1 1223279 R 525909 CDS YP_003109778.1 256371954 8323246 complement(1223974..1224672) 1 NC_013124.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: smd:Smed_5362 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1224672 8323246 Afer_1173 Acidimicrobium ferrooxidans DSM 10331 winged helix family two component transcriptional regulator YP_003109778.1 1223974 R 525909 CDS YP_003109779.1 256371955 8323247 complement(1224669..1226135) 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: smd:Smed_5361 osmosensitive K+ channel signal transduction histidine kinase; histidine kinase 1226135 8323247 Afer_1174 Acidimicrobium ferrooxidans DSM 10331 histidine kinase YP_003109779.1 1224669 R 525909 CDS YP_003109780.1 256371956 8323248 1226154..1227323 1 NC_013124.1 PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: nfa:nfa15690 two-component system sensor kinase; osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD 1227323 8323248 Afer_1175 Acidimicrobium ferrooxidans DSM 10331 osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD YP_003109780.1 1226154 D 525909 CDS YP_003109781.1 256371957 8323249 complement(1227313..1227864) 1 NC_013124.1 PFAM: K transporting ATPase KdpC subunit; KEGG: acr:Acry_3490 potassium-transporting ATPase, C subunit; Potassium-transporting ATPase 1227864 8323249 Afer_1176 Acidimicrobium ferrooxidans DSM 10331 Potassium-transporting ATPase YP_003109781.1 1227313 R 525909 CDS YP_003109782.1 256371958 8323250 complement(1227861..1229918) 1 NC_013124.1 TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: fra:Francci3_3286 potassium-transporting ATPase subunit B; K+-transporting ATPase subunit B 1229918 8323250 Afer_1177 Acidimicrobium ferrooxidans DSM 10331 K+-transporting ATPase subunit B YP_003109782.1 1227861 R 525909 CDS YP_003109783.1 256371959 8323251 complement(1229915..1231609) 1 NC_013124.1 KEGG: mlo:mll3133 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 1231609 8323251 Afer_1178 Acidimicrobium ferrooxidans DSM 10331 potassium-transporting ATPase subunit A YP_003109783.1 1229915 R 525909 CDS YP_003109784.1 256371960 8323252 1231739..1232191 1 NC_013124.1 KEGG: mtf:TBFG_13922 transmembrane protein; hypothetical protein 1232191 8323252 Afer_1179 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109784.1 1231739 D 525909 CDS YP_003109785.1 256371961 8323253 complement(1232188..1233444) 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: nca:Noca_3966 major facilitator transporter; major facilitator superfamily protein 1233444 8323253 Afer_1180 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109785.1 1232188 R 525909 CDS YP_003109786.1 256371962 8323254 1233610..1235019 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: afe:Lferr_0867 amino acid permease-associated region; amino acid permease-associated protein 1235019 8323254 Afer_1181 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003109786.1 1233610 D 525909 CDS YP_003109787.1 256371963 8323255 complement(1235050..1235838) 1 NC_013124.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mkm:Mkms_5833 4-oxalocrotonate decarboxylase; fumarylacetoacetate (FAA) hydrolase 1235838 8323255 Afer_1182 Acidimicrobium ferrooxidans DSM 10331 fumarylacetoacetate (FAA) hydrolase YP_003109787.1 1235050 R 525909 CDS YP_003109788.1 256371964 8323256 complement(1235964..1237127) 1 NC_013124.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: afw:Anae109_0026 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 1237127 8323256 Afer_1183 Acidimicrobium ferrooxidans DSM 10331 UBA/THIF-type NAD/FAD binding protein YP_003109788.1 1235964 R 525909 CDS YP_003109789.1 256371965 8323257 1237348..1237470 1 NC_013124.1 KEGG: mkm:Mkms_0862 transposase IS3/IS911 family protein; hypothetical protein 1237470 8323257 Afer_1184 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109789.1 1237348 D 525909 CDS YP_003109790.1 256371966 8323259 1238279..1238782 1 NC_013124.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rha:RHA1_ro01261 RNA polymerase sigma factor SigL; ECF subfamily RNA polymerase sigma-24 subunit 1238782 8323259 Afer_1185 Acidimicrobium ferrooxidans DSM 10331 ECF subfamily RNA polymerase sigma-24 subunit YP_003109790.1 1238279 D 525909 CDS YP_003109791.1 256371967 8323260 1238769..1239431 1 NC_013124.1 KEGG: art:Arth_3788 transmembrane anti- sigma factor; transmembrane anti-sigma factor 1239431 8323260 Afer_1186 Acidimicrobium ferrooxidans DSM 10331 transmembrane anti-sigma factor YP_003109791.1 1238769 D 525909 CDS YP_003109792.1 256371968 8323261 1239535..1240038 1 NC_013124.1 PFAM: Phosphoglycerate mutase; KEGG: ape:APE_2484.1 phosphohistidine phosphatase SixA; phosphohistidine phosphatase SixA 1240038 8323261 Afer_1187 Acidimicrobium ferrooxidans DSM 10331 phosphohistidine phosphatase SixA YP_003109792.1 1239535 D 525909 CDS YP_003109793.1 256371969 8323262 1240048..1241637 1 NC_013124.1 PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dsh:Dshi_2727 exodeoxyribonuclease VII, large subunit; Exodeoxyribonuclease VII 1241637 8323262 Afer_1188 Acidimicrobium ferrooxidans DSM 10331 Exodeoxyribonuclease VII YP_003109793.1 1240048 D 525909 CDS YP_003109794.1 256371970 8323263 1241627..1241914 1 NC_013124.1 hypothetical protein 1241914 8323263 Afer_1189 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109794.1 1241627 D 525909 CDS YP_003109795.1 256371971 8323264 complement(1241911..1243164) 1 NC_013124.1 PFAM: aminotransferase class-III; KEGG: sen:SACE_3329 adenosylmethionine-8-amino-7- oxononanoate transaminase; class III aminotransferase 1243164 8323264 Afer_1190 Acidimicrobium ferrooxidans DSM 10331 class III aminotransferase YP_003109795.1 1241911 R 525909 CDS YP_003109796.1 256371972 8323265 complement(1243187..1244839) 1 NC_013124.1 KEGG: npu:Npun_F1553 diguanylate cyclase with PAS/PAC and GAF sensors; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF sensor-containing diguanylate cyclase 1244839 8323265 Afer_1191 Acidimicrobium ferrooxidans DSM 10331 GAF sensor-containing diguanylate cyclase YP_003109796.1 1243187 R 525909 CDS YP_003109797.1 256371973 8323266 complement(1244953..1246050) 1 NC_013124.1 PFAM: NLP/P60 protein; KEGG: ace:Acel_2144 NLP/P60 protein; NLP/P60 protein 1246050 8323266 Afer_1192 Acidimicrobium ferrooxidans DSM 10331 NLP/P60 protein YP_003109797.1 1244953 R 525909 CDS YP_003109798.1 256371974 8323267 1246147..1247331 1 NC_013124.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: sen:SACE_1910 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1247331 8323267 Afer_1193 Acidimicrobium ferrooxidans DSM 10331 L-carnitine dehydratase/bile acid-inducible protein F YP_003109798.1 1246147 D 525909 CDS YP_003109799.1 256371975 8323268 complement(1247250..1248431) 1 NC_013124.1 PFAM: Amidase; KEGG: bmj:BMULJ_03430 amidase; Amidase 1248431 8323268 Afer_1194 Acidimicrobium ferrooxidans DSM 10331 Amidase YP_003109799.1 1247250 R 525909 CDS YP_003109800.1 256371976 8323269 complement(1248415..1249284) 1 NC_013124.1 KEGG: scl:sce0507 hypothetical protein; hypothetical protein 1249284 8323269 Afer_1195 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109800.1 1248415 R 525909 CDS YP_003109801.1 256371977 8323270 complement(1249484..1249954) 1 NC_013124.1 KEGG: csc:Csac_1200 RpiB/LacA/LacB family sugar- phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 1249954 8323270 Afer_1196 Acidimicrobium ferrooxidans DSM 10331 RpiB/LacA/LacB family sugar-phosphate isomerase YP_003109801.1 1249484 R 525909 CDS YP_003109802.1 256371978 8323271 complement(1249951..1250427) 1 NC_013124.1 KEGG: msm:MSMEG_6365 hypothetical protein; hypothetical protein 1250427 8323271 Afer_1197 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109802.1 1249951 R 525909 CDS YP_003109803.1 256371979 8323272 complement(1250484..1251608) 1 NC_013124.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; PglZ domain protein; KEGG: tfu:Tfu_2126 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 1251608 8323272 Afer_1198 Acidimicrobium ferrooxidans DSM 10331 type I phosphodiesterase/nucleotide pyrophosphatase YP_003109803.1 1250484 R 525909 CDS YP_003109804.1 256371980 8323273 1251921..1252376 1 NC_013124.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: abb:ABBFA_001864 rrf2 family protein (transcriptional regulator) family protein; BadM/Rrf2 family transcriptional regulator 1252376 8323273 Afer_1199 Acidimicrobium ferrooxidans DSM 10331 BadM/Rrf2 family transcriptional regulator YP_003109804.1 1251921 D 525909 CDS YP_003109805.1 256371981 8323274 1252376..1254979 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: sen:SACE_1780 acetyl-CoA synthetase; GCN5-like N-acetyltransferase 1254979 8323274 Afer_1200 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003109805.1 1252376 D 525909 CDS YP_003109806.1 256371982 8323275 complement(1255059..1255541) 1 NC_013124.1 PFAM: glutathione peroxidase; KEGG: nfa:nfa46650 glutathione peroxidase; Glutathione peroxidase 1255541 8323275 Afer_1201 Acidimicrobium ferrooxidans DSM 10331 Glutathione peroxidase YP_003109806.1 1255059 R 525909 CDS YP_003109807.1 256371983 8323276 complement(1255626..1257089) 1 NC_013124.1 PFAM: Aldehyde Dehydrogenase; KEGG: aau:AAur_1331 succinate-semialdehyde dehydrogenase; aldehyde dehydrogenase 1257089 8323276 Afer_1202 Acidimicrobium ferrooxidans DSM 10331 aldehyde dehydrogenase YP_003109807.1 1255626 R 525909 CDS YP_003109808.1 256371984 8323277 1257214..1258827 1 NC_013124.1 PFAM: protein of unknown function DUF885; KEGG: sen:SACE_1720 hypothetical protein; hypothetical protein 1258827 8323277 Afer_1203 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109808.1 1257214 D 525909 CDS YP_003109809.1 256371985 8323278 complement(1258866..1259048) 1 NC_013124.1 hypothetical protein 1259048 8323278 Afer_1204 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109809.1 1258866 R 525909 CDS YP_003109810.1 256371986 8323279 complement(1259134..1259934) 1 NC_013124.1 KEGG: sco:SCO4586 ABC transporter integral membrane protein; ABC transporter integral membrane protein 1259934 8323279 Afer_1205 Acidimicrobium ferrooxidans DSM 10331 ABC transporter integral membrane protein YP_003109810.1 1259134 R 525909 CDS YP_003109811.1 256371987 8323280 complement(1259924..1260832) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2052 antibiotic ABC transporter, ATP-binding protein; ABC transporter-like protein 1260832 8323280 Afer_1206 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109811.1 1259924 R 525909 CDS YP_003109812.1 256371988 8323281 complement(1260829..1262007) 1 NC_013124.1 KEGG: sma:SAV_4866 hypothetical protein; hypothetical protein 1262007 8323281 Afer_1207 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109812.1 1260829 R 525909 CDS YP_003109813.1 256371989 8323282 1262859..1263767 1 NC_013124.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: efa:EF1522 RNA polymerase sigma factor RpoD; RpoD subfamily RNA polymerase sigma-70 subunit 1263767 8323282 Afer_1208 Acidimicrobium ferrooxidans DSM 10331 RpoD subfamily RNA polymerase sigma-70 subunit YP_003109813.1 1262859 D 525909 CDS YP_003109814.1 256371990 8323283 complement(1264007..1264936) 1 NC_013124.1 KEGG: tfu:Tfu_1123 ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 1264936 8323283 Afer_1209 Acidimicrobium ferrooxidans DSM 10331 RluA family pseudouridine synthase YP_003109814.1 1264007 R 525909 CDS YP_003109815.1 256371991 8323284 complement(1264929..1265414) 1 NC_013124.1 PFAM: peptidase A8 signal peptidase II; KEGG: mgi:Mflv_3640 lipoprotein signal peptidase; peptidase A8 signal peptidase II 1265414 8323284 Afer_1210 Acidimicrobium ferrooxidans DSM 10331 peptidase A8 signal peptidase II YP_003109815.1 1264929 R 525909 CDS YP_003109816.1 256371992 8323285 1265462..1265881 1 NC_013124.1 hypothetical protein 1265881 8323285 Afer_1211 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109816.1 1265462 D 525909 CDS YP_003109817.1 256371993 8323286 1265951..1269169 1 NC_013124.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: kra:Krad_3498 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1269169 8323286 Afer_1212 Acidimicrobium ferrooxidans DSM 10331 isoleucyl-tRNA synthetase YP_003109817.1 1265951 D 525909 CDS YP_003109818.1 256371994 8323287 complement(1269343..1270968) 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: tac:Ta0427 L-asparagine permease related protein; amino acid permease-associated protein 1270968 8323287 Afer_1213 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003109818.1 1269343 R 525909 CDS YP_003109819.1 256371995 8323289 complement(1272791..1273846) 1 NC_013124.1 KEGG: gka:GK2591 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 1273846 8323289 Afer_1215 Acidimicrobium ferrooxidans DSM 10331 Holliday junction DNA helicase RuvB YP_003109819.1 1272791 R 525909 CDS YP_003109820.1 256371996 8323290 complement(1273843..1274412) 1 NC_013124.1 KEGG: afw:Anae109_0993 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; SMART: Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA 1274412 8323290 Afer_1216 Acidimicrobium ferrooxidans DSM 10331 Holliday junction DNA helicase RuvA YP_003109820.1 1273843 R 525909 CDS YP_003109821.1 256371997 8323291 complement(1274409..1274903) 1 NC_013124.1 KEGG: mbn:Mboo_0111 crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1274903 8323291 Afer_1217 Acidimicrobium ferrooxidans DSM 10331 crossover junction endodeoxyribonuclease RuvC YP_003109821.1 1274409 R 525909 CDS YP_003109822.1 256371998 8323292 complement(1274896..1275357) 1 NC_013124.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: fre:Franean1_6190 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1275357 8323292 Afer_1218 Acidimicrobium ferrooxidans DSM 10331 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_003109822.1 1274896 R 525909 CDS YP_003109823.1 256371999 8323293 complement(1275354..1276106) 1 NC_013124.1 PFAM: protein of unknown function DUF28; KEGG: gme:Gmet_0743 hypothetical protein; hypothetical protein 1276106 8323293 Afer_1219 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109823.1 1275354 R 525909 CDS YP_003109824.1 256372000 8323294 complement(1276153..1276791) 1 NC_013124.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: saq:Sare_1778 SNO glutamine amidotransferase; SNO glutamine amidotransferase 1276791 8323294 Afer_1220 Acidimicrobium ferrooxidans DSM 10331 SNO glutamine amidotransferase YP_003109824.1 1276153 R 525909 CDS YP_003109825.1 256372001 8323295 complement(1276796..1277683) 1 NC_013124.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 1277683 8323295 Afer_1221 Acidimicrobium ferrooxidans DSM 10331 pyridoxal biosynthesis lyase PdxS YP_003109825.1 1276796 R 525909 CDS YP_003109826.1 256372002 8323296 complement(1277754..1278539) 1 NC_013124.1 KEGG: saq:Sare_0473 NADH dehydrogenase (quinone); hypothetical protein 1278539 8323296 Afer_1222 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109826.1 1277754 R 525909 CDS YP_003109827.1 256372003 8323297 complement(1278536..1279603) 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_4290 phosphatidylinositol alpha- mannosyltransferase; group 1 glycosyl transferase 1279603 8323297 Afer_1223 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003109827.1 1278536 R 525909 CDS YP_003109828.1 256372004 8323298 complement(1279614..1280318) 1 NC_013124.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: tfu:Tfu_2102 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 1280318 8323298 Afer_1224 Acidimicrobium ferrooxidans DSM 10331 lipid A biosynthesis acyltransferase YP_003109828.1 1279614 R 525909 CDS YP_003109829.1 256372005 8323299 complement(1280514..1281248) 1 NC_013124.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: saq:Sare_1773 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1281248 8323299 Afer_1225 Acidimicrobium ferrooxidans DSM 10331 CDP-alcohol phosphatidyltransferase YP_003109829.1 1280514 R 525909 CDS YP_003109830.1 256372006 8323300 1281423..1283423 1 NC_013124.1 KEGG: rha:RHA1_ro05886 elongation factor EF2; TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; elongation factor G domain protein; Miro domain protein; GTP-binding protein HSR1-related; protein synthesis factor GTP- binding; SMART: AAA ATPase; small GTP-binding protein 1283423 8323300 Afer_1226 Acidimicrobium ferrooxidans DSM 10331 small GTP-binding protein YP_003109830.1 1281423 D 525909 CDS YP_003109831.1 256372007 8323301 complement(1284125..1284496) 1 NC_013124.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_C_1212 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 1284496 8323301 Afer_1227 Acidimicrobium ferrooxidans DSM 10331 Glyoxalase/bleomycin resistance protein/dioxygenase YP_003109831.1 1284125 R 525909 CDS YP_003109832.1 256372008 8323302 complement(1284902..1285393) 1 NC_013124.1 PFAM: histidine triad (HIT) protein; KEGG: sus:Acid_4300 histidine triad (HIT) protein; histidine triad (HIT) protein 1285393 8323302 Afer_1228 Acidimicrobium ferrooxidans DSM 10331 histidine triad (HIT) protein YP_003109832.1 1284902 R 525909 CDS YP_003109833.1 256372009 8323303 complement(1285393..1287264) 1 NC_013124.1 KEGG: fal:FRAAL5168 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; threonyl-tRNA synthetase 1287264 8323303 Afer_1229 Acidimicrobium ferrooxidans DSM 10331 threonyl-tRNA synthetase YP_003109833.1 1285393 R 525909 CDS YP_003109834.1 256372010 8323304 complement(1287261..1288379) 1 NC_013124.1 PFAM: Cysteinyl-tRNA synthetase class Ia ; tRNA synthetase class I (M); KEGG: sma:SAV_6647 cysteinyl-tRNA synthetase; Cysteine--tRNA ligase 1288379 8323304 Afer_1230 Acidimicrobium ferrooxidans DSM 10331 Cysteine--tRNA ligase YP_003109834.1 1287261 R 525909 CDS YP_003109835.1 256372011 8323305 complement(1288376..1289044) 1 NC_013124.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: fra:Francci3_3151 reduced coenzyme F420:NADP oxidoreductase; NADP oxidoreductase coenzyme F420-dependent 1289044 8323305 Afer_1231 Acidimicrobium ferrooxidans DSM 10331 NADP oxidoreductase coenzyme F420-dependent YP_003109835.1 1288376 R 525909 CDS YP_003109836.1 256372012 8323306 1289143..1289916 1 NC_013124.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 1289916 8323306 Afer_1232 Acidimicrobium ferrooxidans DSM 10331 enoyl-(acyl carrier protein) reductase YP_003109836.1 1289143 D 525909 CDS YP_003109837.1 256372013 8323307 1289985..1290752 1 NC_013124.1 KEGG: predicted gene, 100039767; hypothetical protein 1290752 8323307 Afer_1233 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109837.1 1289985 D 525909 CDS YP_003109838.1 256372014 8323308 complement(1290842..1291798) 1 NC_013124.1 PFAM: Pirin domain protein; KEGG: ace:Acel_1948 pirin domain-containing protein; Pirin domain-containing protein 1291798 8323308 Afer_1234 Acidimicrobium ferrooxidans DSM 10331 Pirin domain-containing protein YP_003109838.1 1290842 R 525909 CDS YP_003109839.1 256372015 8323309 complement(1291824..1292660) 1 NC_013124.1 KEGG: tfu:Tfu_1956 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; apurinic endonuclease Apn1 1292660 8323309 Afer_1235 Acidimicrobium ferrooxidans DSM 10331 apurinic endonuclease Apn1 YP_003109839.1 1291824 R 525909 CDS YP_003109840.1 256372016 8323310 complement(1292790..1293713) 1 NC_013124.1 PFAM: DivIVA family protein; KEGG: nfa:nfa17740 hypothetical protein; DivIVA family protein 1293713 8323310 Afer_1236 Acidimicrobium ferrooxidans DSM 10331 DivIVA family protein YP_003109840.1 1292790 R 525909 CDS YP_003109841.1 256372017 8323311 complement(1293765..1294034) 1 NC_013124.1 PFAM: protein of unknown function YGGT; KEGG: azc:AZC_3317 hypothetical protein; hypothetical protein 1294034 8323311 Afer_1237 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109841.1 1293765 R 525909 CDS YP_003109842.1 256372018 8323312 complement(1294024..1294563) 1 NC_013124.1 PFAM: protein of unknown function DUF552; KEGG: rxy:Rxyl_1486 protein of unknown function DUF552; hypothetical protein 1294563 8323312 Afer_1238 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109842.1 1294024 R 525909 CDS YP_003109843.1 256372019 8323313 complement(1294560..1295252) 1 NC_013124.1 PFAM: alanine racemase domain protein; KEGG: afw:Anae109_1365 alanine racemase domain- containing protein; alanine racemase domain-containing protein 1295252 8323313 Afer_1239 Acidimicrobium ferrooxidans DSM 10331 alanine racemase domain-containing protein YP_003109843.1 1294560 R 525909 CDS YP_003109844.1 256372020 8323314 complement(1295249..1295878) 1 NC_013124.1 PFAM: protein of unknown function DUF152; KEGG: rxy:Rxyl_1488 protein of unknown function DUF152; hypothetical protein 1295878 8323314 Afer_1240 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109844.1 1295249 R 525909 CDS YP_003109845.1 256372021 8323315 complement(1295885..1296973) 1 NC_013124.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: sgr:SGR_5423 cell division protein FtsZ; cell division protein FtsZ 1296973 8323315 Afer_1241 Acidimicrobium ferrooxidans DSM 10331 cell division protein FtsZ YP_003109845.1 1295885 R 525909 CDS YP_003109846.1 256372022 8323316 complement(1297038..1297646) 1 NC_013124.1 KEGG: sen:SACE_5302 sugar transport integral membrane protein; hypothetical protein 1297646 8323316 Afer_1242 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109846.1 1297038 R 525909 CDS YP_003109847.1 256372023 8323317 complement(1297709..1298662) 1 NC_013124.1 KEGG: hmo:HM1_2061 udp-N- acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 1298662 8323317 Afer_1243 Acidimicrobium ferrooxidans DSM 10331 UDP-N-acetylenolpyruvoylglucosamine reductase YP_003109847.1 1297709 R 525909 CDS YP_003109848.1 256372024 8323318 complement(1298659..1300026) 1 NC_013124.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: pth:PTH_1860 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate/alanine ligase 1300026 8323318 Afer_1244 Acidimicrobium ferrooxidans DSM 10331 UDP-N-acetylmuramate/alanine ligase YP_003109848.1 1298659 R 525909 CDS YP_003109849.1 256372025 8323319 complement(1300014..1301066) 1 NC_013124.1 PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28; KEGG: pzu:PHZ_c2323 UDP-N-acetylglucosamine--N- acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; Undecaprenyldiphospho-muramoylpentapeptide beta-N -acetylglucosaminyltransferase 1301066 8323319 Afer_1245 Acidimicrobium ferrooxidans DSM 10331 Undecaprenyldiphospho-muramoylpentapeptide beta-N -acetylglucosaminyltransferase YP_003109849.1 1300014 R 525909 CDS YP_003109850.1 256372026 8323320 complement(1301063..1302202) 1 NC_013124.1 PFAM: cell cycle protein; KEGG: nfa:nfa17650 cell division protein; cell cycle protein 1302202 8323320 Afer_1246 Acidimicrobium ferrooxidans DSM 10331 cell cycle protein YP_003109850.1 1301063 R 525909 CDS YP_003109851.1 256372027 8323321 complement(1302208..1303521) 1 NC_013124.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: pth:PTH_1863 UDP-N-acetylmuramoylalanine-D- glutamate ligase; UDP-N-acetylmuramoylalanine/D-glutamate ligase 1303521 8323321 Afer_1247 Acidimicrobium ferrooxidans DSM 10331 UDP-N-acetylmuramoylalanine/D-glutamate ligase YP_003109851.1 1302208 R 525909 CDS YP_003109852.1 256372028 8323322 complement(1303518..1304552) 1 NC_013124.1 KEGG: fal:FRAAL2193 phospho-N-acetylmuramoyl- pentapeptide-transferase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-transf erase; PFAM: glycosyl transferase family 4; phospho-N-acetylmuramoyl-pentapeptide- transferase 1304552 8323322 Afer_1248 Acidimicrobium ferrooxidans DSM 10331 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_003109852.1 1303518 R 525909 CDS YP_003109853.1 256372029 8323323 complement(1304549..1306048) 1 NC_013124.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: kra:Krad_3204 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase 1306048 8323323 Afer_1249 Acidimicrobium ferrooxidans DSM 10331 UDP-N-acetylmuramyl-tripeptide synthetase YP_003109853.1 1304549 R 525909 CDS YP_003109854.1 256372030 8323324 complement(1306045..1307823) 1 NC_013124.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerization domain; KEGG: ace:Acel_1004 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 1307823 8323324 Afer_1250 Acidimicrobium ferrooxidans DSM 10331 peptidoglycan glycosyltransferase YP_003109854.1 1306045 R 525909 CDS YP_003109855.1 256372031 8323325 complement(1307816..1308244) 1 NC_013124.1 hypothetical protein 1308244 8323325 Afer_1251 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109855.1 1307816 R 525909 CDS YP_003109856.1 256372032 8323326 complement(1308226..1309185) 1 NC_013124.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: ace:Acel_1002 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 1309185 8323326 Afer_1252 Acidimicrobium ferrooxidans DSM 10331 S-adenosyl-methyltransferase MraW YP_003109856.1 1308226 R 525909 CDS YP_003109857.1 256372033 8323327 complement(1309178..1309600) 1 NC_013124.1 PFAM: protein of unknown function UPF0040; KEGG: cth:Cthe_0982 MraZ protein; hypothetical protein 1309600 8323327 Afer_1253 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109857.1 1309178 R 525909 CDS YP_003109858.1 256372034 8323328 complement(1309909..1310565) 1 NC_013124.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: cau:Caur_3882 biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 1310565 8323328 Afer_1254 Acidimicrobium ferrooxidans DSM 10331 biotin/lipoate A/B protein ligase YP_003109858.1 1309909 R 525909 CDS YP_003109859.1 256372035 8323329 1310687..1310962 1 NC_013124.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sma:SAV_2677 hypothetical protein; AsnC family transcriptional regulator 1310962 8323329 Afer_1255 Acidimicrobium ferrooxidans DSM 10331 AsnC family transcriptional regulator YP_003109859.1 1310687 D 525909 CDS YP_003109860.1 256372036 8323330 complement(1310925..1311473) 1 NC_013124.1 hypothetical protein 1311473 8323330 Afer_1256 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109860.1 1310925 R 525909 CDS YP_003109861.1 256372037 8323331 1311587..1312831 1 NC_013124.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: hya:HY04AAS1_1111 peptidase S11 D-alanyl-D- alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 1312831 8323331 Afer_1257 Acidimicrobium ferrooxidans DSM 10331 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_003109861.1 1311587 D 525909 CDS YP_003109862.1 256372038 8323332 complement(1313001..1315055) 1 NC_013124.1 KEGG: hypothetical LOC798921; hypothetical protein 1315055 8323332 Afer_1258 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109862.1 1313001 R 525909 CDS YP_003109863.1 256372039 8323335 complement(1315637..1316272) 1 NC_013124.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: nca:Noca_2059 undecaprenyl-diphosphatase; PA-phosphatase-like phosphoesterase 1316272 8323335 Afer_1259 Acidimicrobium ferrooxidans DSM 10331 PA-phosphatase-like phosphoesterase YP_003109863.1 1315637 R 525909 CDS YP_003109864.1 256372040 8323336 complement(1316365..1317249) 1 NC_013124.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; KEGG: cau:Caur_3583 RNA polymerase sigma factor RpoD; RNA polymerase sigma-32 subunit RpoH 1317249 8323336 Afer_1260 Acidimicrobium ferrooxidans DSM 10331 RNA polymerase sigma-32 subunit RpoH YP_003109864.1 1316365 R 525909 CDS YP_003109865.1 256372041 8323337 complement(1317246..1319012) 1 NC_013124.1 KEGG: fra:Francci3_1282 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; DNA primase 1319012 8323337 Afer_1261 Acidimicrobium ferrooxidans DSM 10331 DNA primase YP_003109865.1 1317246 R 525909 CDS YP_003109866.1 256372042 8323338 complement(1319023..1321656) 1 NC_013124.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1321656 8323338 Afer_1262 Acidimicrobium ferrooxidans DSM 10331 pyruvate phosphate dikinase YP_003109866.1 1319023 R 525909 CDS YP_003109867.1 256372043 8323339 complement(1321747..1323093) 1 NC_013124.1 TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: deb:DehaBAV1_0713 glycyl-tRNA synthetase; glycyl-tRNA synthetase 1323093 8323339 Afer_1263 Acidimicrobium ferrooxidans DSM 10331 glycyl-tRNA synthetase YP_003109867.1 1321747 R 525909 CDS YP_003109868.1 256372044 8323340 complement(1323122..1323871) 1 NC_013124.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: nca:Noca_1930 DNA repair protein RecO; DNA repair protein RecO 1323871 8323340 Afer_1264 Acidimicrobium ferrooxidans DSM 10331 DNA repair protein RecO YP_003109868.1 1323122 R 525909 CDS YP_003109869.1 256372045 8323341 complement(1323868..1324068) 1 NC_013124.1 hypothetical protein 1324068 8323341 Afer_1265 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109869.1 1323868 R 525909 CDS YP_003109870.1 256372046 8323342 complement(1324065..1324790) 1 NC_013124.1 KEGG: tfu:Tfu_0853 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1324790 8323342 Afer_1266 Acidimicrobium ferrooxidans DSM 10331 undecaprenyl diphosphate synthase YP_003109870.1 1324065 R 525909 CDS YP_003109871.1 256372047 8323343 complement(1324801..1325256) 1 NC_013124.1 PFAM: Domain of unknown function DUF1794; KEGG: cef:CE1476 hypothetical protein; hypothetical protein 1325256 8323343 Afer_1267 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109871.1 1324801 R 525909 CDS YP_003109872.1 256372048 8323344 complement(1325322..1326185) 1 NC_013124.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: mpo:Mpop_2233 GTP-binding protein Era; GTP-binding protein Era 1326185 8323344 Afer_1268 Acidimicrobium ferrooxidans DSM 10331 GTP-binding protein Era YP_003109872.1 1325322 R 525909 CDS YP_003109873.1 256372049 8323345 complement(1326175..1327437) 1 NC_013124.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: cpf:CPF_0036 transporter; CBS domain-containing protein 1327437 8323345 Afer_1269 Acidimicrobium ferrooxidans DSM 10331 CBS domain-containing protein YP_003109873.1 1326175 R 525909 CDS YP_003109874.1 256372050 8323346 complement(1327434..1327979) 1 NC_013124.1 PFAM: protein of unknown function UPF0054; KEGG: saq:Sare_3831 metalloprotease; hypothetical protein 1327979 8323346 Afer_1270 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109874.1 1327434 R 525909 CDS YP_003109875.1 256372051 8323347 complement(1327972..1328961) 1 NC_013124.1 PFAM: PhoH family protein; KEGG: stp:Strop_3453 PhoH family protein; PhoH family protein 1328961 8323347 Afer_1271 Acidimicrobium ferrooxidans DSM 10331 PhoH family protein YP_003109875.1 1327972 R 525909 CDS YP_003109876.1 256372052 8323348 1329022..1329486 1 NC_013124.1 KEGG: hypothetical protein; hypothetical protein 1329486 8323348 Afer_1272 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109876.1 1329022 D 525909 CDS YP_003109877.1 256372053 8323349 complement(1329546..1329785) 1 NC_013124.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: hypothetical protein; excisionase family DNA binding domain-containing protein 1329785 8323349 Afer_1273 Acidimicrobium ferrooxidans DSM 10331 excisionase family DNA binding domain-containing protein YP_003109877.1 1329546 R 525909 CDS YP_003109878.1 256372054 8323350 1329958..1330671 1 NC_013124.1 PFAM: SAF domain protein; KEGG: aau:AAur_pTC10012 hypothetical protein; SAF domain-containing protein 1330671 8323350 Afer_1274 Acidimicrobium ferrooxidans DSM 10331 SAF domain-containing protein YP_003109878.1 1329958 D 525909 CDS YP_003109879.1 256372055 8323351 1330664..1331893 1 NC_013124.1 hypothetical protein 1331893 8323351 Afer_1275 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109879.1 1330664 D 525909 CDS YP_003109880.1 256372056 8323352 complement(1331857..1332729) 1 NC_013124.1 PFAM: beta-lactamase domain protein; KEGG: sco:SCO3572 hydrolase; beta-lactamase domain-containing protein 1332729 8323352 Afer_1276 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase domain-containing protein YP_003109880.1 1331857 R 525909 CDS YP_003109881.1 256372057 8323353 1332746..1333942 1 NC_013124.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: kra:Krad_3789 type II secretion system protein E; type II secretion system protein E 1333942 8323353 Afer_1277 Acidimicrobium ferrooxidans DSM 10331 type II secretion system protein E YP_003109881.1 1332746 D 525909 CDS YP_003109882.1 256372058 8323354 1333939..1334757 1 NC_013124.1 KEGG: mul:MUL_4231 hypothetical protein; hypothetical protein 1334757 8323354 Afer_1278 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109882.1 1333939 D 525909 CDS YP_003109883.1 256372059 8323355 1334754..1335557 1 NC_013124.1 KEGG: kra:Krad_3788 type II secretion system protein; hypothetical protein 1335557 8323355 Afer_1279 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109883.1 1334754 D 525909 CDS YP_003109884.1 256372060 8323357 1337417..1337689 1 NC_013124.1 hypothetical protein 1337689 8323357 Afer_1281 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109884.1 1337417 D 525909 CDS YP_003109885.1 256372061 8323358 1337736..1338032 1 NC_013124.1 KEGG: hypothetical protein; hypothetical protein 1338032 8323358 Afer_1282 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109885.1 1337736 D 525909 CDS YP_003109886.1 256372062 8323359 1338106..1338417 1 NC_013124.1 hypothetical protein 1338417 8323359 Afer_1283 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109886.1 1338106 D 525909 CDS YP_003109887.1 256372063 8323360 1338407..1338829 1 NC_013124.1 KEGG: rso:RS05070 hemagglutinin/hemolysin- related protein; hypothetical protein 1338829 8323360 Afer_1284 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109887.1 1338407 D 525909 CDS YP_003109888.1 256372064 8323361 1338839..1339708 1 NC_013124.1 KEGG: fre:Franean1_3861 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 1339708 8323361 Afer_1285 Acidimicrobium ferrooxidans DSM 10331 protein tyrosine/serine phosphatase YP_003109888.1 1338839 D 525909 CDS YP_003109889.1 256372065 8323362 1339925..1341901 1 NC_013124.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: ace:Acel_1984 acetyl-coenzyme A synthetase; acetate/CoA ligase 1341901 8323362 Afer_1286 Acidimicrobium ferrooxidans DSM 10331 acetate/CoA ligase YP_003109889.1 1339925 D 525909 CDS YP_003109890.1 256372066 8323363 1341916..1342683 1 NC_013124.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: pth:PTH_2591 hypothetical protein; GPR1/FUN34/yaaH family protein 1342683 8323363 Afer_1287 Acidimicrobium ferrooxidans DSM 10331 GPR1/FUN34/yaaH family protein YP_003109890.1 1341916 D 525909 CDS YP_003109891.1 256372067 8323364 complement(1342658..1342963) 1 NC_013124.1 hypothetical protein 1342963 8323364 Afer_1288 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109891.1 1342658 R 525909 CDS YP_003109892.1 256372068 8323365 complement(1343204..1343464) 1 NC_013124.1 hypothetical protein 1343464 8323365 Afer_1289 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109892.1 1343204 R 525909 CDS YP_003109893.1 256372069 8323366 complement(1343475..1344566) 1 NC_013124.1 KEGG: ace:Acel_0781 coproporphyrinogen III oxidase, anaerobic; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; Coproporphyrinogen dehydrogenase 1344566 8323366 Afer_1290 Acidimicrobium ferrooxidans DSM 10331 Coproporphyrinogen dehydrogenase YP_003109893.1 1343475 R 525909 CDS YP_003109894.1 256372070 8323367 complement(1344563..1345147) 1 NC_013124.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: fre:Franean1_2773 XRE family transcriptional regulator; helix-turn-helix domain-containing protein 1345147 8323367 Afer_1291 Acidimicrobium ferrooxidans DSM 10331 helix-turn-helix domain-containing protein YP_003109894.1 1344563 R 525909 CDS YP_003109895.1 256372071 8323368 complement(1345199..1345924) 1 NC_013124.1 PFAM: protein of unknown function DUF558; KEGG: afw:Anae109_0268 hypothetical protein; hypothetical protein 1345924 8323368 Afer_1292 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109895.1 1345199 R 525909 CDS YP_003109896.1 256372072 8323369 complement(1345927..1347045) 1 NC_013124.1 KEGG: sth:STH505 heat shock protein, DnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ 1347045 8323369 Afer_1293 Acidimicrobium ferrooxidans DSM 10331 chaperone protein DnaJ YP_003109896.1 1345927 R 525909 CDS YP_003109897.1 256372073 8323370 complement(1347078..1348088) 1 NC_013124.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: eli:ELI_06015 heat-inducible transcription repressor; heat-inducible transcription repressor HrcA 1348088 8323370 Afer_1294 Acidimicrobium ferrooxidans DSM 10331 heat-inducible transcription repressor HrcA YP_003109897.1 1347078 R 525909 CDS YP_003109898.1 256372074 8323371 complement(1348204..1348473) 1 NC_013124.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: fre:Franean1_2105 ribosomal protein S20; 30S ribosomal protein S20 1348473 8323371 Afer_1295 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S20 YP_003109898.1 1348204 R 525909 CDS YP_003109899.1 256372075 8323372 1348673..1350460 1 NC_013124.1 TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; protein synthesis factor GTP-binding; KEGG: ace:Acel_0778 GTP-binding protein LepA; GTP-binding protein LepA 1350460 8323372 Afer_1296 Acidimicrobium ferrooxidans DSM 10331 GTP-binding protein LepA YP_003109899.1 1348673 D 525909 CDS YP_003109900.1 256372076 8323373 1350498..1351256 1 NC_013124.1 KEGG: fre:Franean1_3800 heat shock protein 70; hypothetical protein 1351256 8323373 Afer_1297 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109900.1 1350498 D 525909 CDS YP_003109901.1 256372077 8323374 complement(1351219..1351737) 1 NC_013124.1 hypothetical protein 1351737 8323374 Afer_1298 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109901.1 1351219 R 525909 CDS YP_003109902.1 256372078 8323375 complement(1351914..1352633) 1 NC_013124.1 PFAM: ApbE family lipoprotein; KEGG: sma:SAV_6768 thiamine biosynthesis lipoprotein precursor; ApbE family lipoprotein 1352633 8323375 Afer_1299 Acidimicrobium ferrooxidans DSM 10331 ApbE family lipoprotein YP_003109902.1 1351914 R 525909 CDS YP_003109903.1 256372079 8323376 complement(1352630..1353097) 1 NC_013124.1 PFAM: FMN-binding domain protein; KEGG: ace:Acel_0050 FMN-binding domain-containing protein; FMN-binding domain-containing protein 1353097 8323376 Afer_1300 Acidimicrobium ferrooxidans DSM 10331 FMN-binding domain-containing protein YP_003109903.1 1352630 R 525909 CDS YP_003109904.1 256372080 8323377 complement(1353107..1354450) 1 NC_013124.1 PFAM: Ferric reductase domain protein transmembrane component domain; FAD-binding 8 domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sma:SAV_2194 oxidoreductase; ferric reductase domain-containing protein transmembrane component 1354450 8323377 Afer_1301 Acidimicrobium ferrooxidans DSM 10331 ferric reductase domain-containing protein transmembrane component YP_003109904.1 1353107 R 525909 CDS YP_003109905.1 256372081 8323378 1354539..1355909 1 NC_013124.1 PFAM: DNA photolyase FAD-binding; KEGG: fal:FRAAL0101 deoxyribodipyrimidine photo- lyase; deoxyribodipyrimidine photo-lyase 1355909 8323378 Afer_1302 Acidimicrobium ferrooxidans DSM 10331 deoxyribodipyrimidine photo-lyase YP_003109905.1 1354539 D 525909 CDS YP_003109906.1 256372082 8323379 complement(1355809..1356816) 1 NC_013124.1 KEGG: rha:RHA1_ro01286 DNA polymerase III delta subunit; DNA polymerase III delta subunit-like protein 1356816 8323379 Afer_1303 Acidimicrobium ferrooxidans DSM 10331 DNA polymerase III delta subunit-like protein YP_003109906.1 1355809 R 525909 CDS YP_003109907.1 256372083 8323380 complement(1356819..1357664) 1 NC_013124.1 KEGG: ace:Acel_1839 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 1357664 8323380 Afer_1304 Acidimicrobium ferrooxidans DSM 10331 dihydropteroate synthase YP_003109907.1 1356819 R 525909 CDS YP_003109908.1 256372084 8323381 complement(1357667..1358374) 1 NC_013124.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: cau:Caur_0205 thioredoxin domain-containing protein; thioredoxin 1358374 8323381 Afer_1305 Acidimicrobium ferrooxidans DSM 10331 thioredoxin YP_003109908.1 1357667 R 525909 CDS YP_003109909.1 256372085 8323382 1358450..1359313 1 NC_013124.1 PFAM: aldo/keto reductase; KEGG: nca:Noca_0658 aldo/keto reductase; aldo/keto reductase 1359313 8323382 Afer_1306 Acidimicrobium ferrooxidans DSM 10331 aldo/keto reductase YP_003109909.1 1358450 D 525909 CDS YP_003109910.1 256372086 8323383 1359310..1360089 1 NC_013124.1 PFAM: alpha/beta hydrolase fold; KEGG: met:M446_4655 3-oxoadipate enol-lactonase; alpha/beta hydrolase fold protein 1360089 8323383 Afer_1307 Acidimicrobium ferrooxidans DSM 10331 alpha/beta hydrolase fold protein YP_003109910.1 1359310 D 525909 CDS YP_003109911.1 256372087 8323384 complement(1360086..1360790) 1 NC_013124.1 KEGG: kra:Krad_3260 leucyl/phenylalanyl-tRNA-- protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 1360790 8323384 Afer_1308 Acidimicrobium ferrooxidans DSM 10331 leucyl/phenylalanyl-tRNA/protein transferase YP_003109911.1 1360086 R 525909 CDS YP_003109912.1 256372088 8323385 complement(1360801..1361451) 1 NC_013124.1 KEGG: mva:Mvan_4367 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN- binding protein 1361451 8323385 Afer_1309 Acidimicrobium ferrooxidans DSM 10331 pyridoxamine 5'-phosphate oxidase-like FMN- binding protein YP_003109912.1 1360801 R 525909 CDS YP_003109913.1 256372089 8323386 complement(1361495..1362241) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_5911 ABC transporter ATP-binding protein; ABC transporter-like protein 1362241 8323386 Afer_1310 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109913.1 1361495 R 525909 CDS YP_003109914.1 256372090 8323387 complement(1362271..1363677) 1 NC_013124.1 PFAM: protein of unknown function DUF214; KEGG: lxx:Lxx03110 integral membrane protein; hypothetical protein 1363677 8323387 Afer_1311 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109914.1 1362271 R 525909 CDS YP_003109915.1 256372091 8323391 1366433..1367374 1 NC_013124.1 KEGG: ank:AnaeK_3975 restriction endonuclease-like protein; restriction endonuclease-like protein 1367374 8323391 Afer_1314 Acidimicrobium ferrooxidans DSM 10331 restriction endonuclease-like protein YP_003109915.1 1366433 D 525909 CDS YP_003109916.1 256372092 8323392 1367396..1367725 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 1367725 8323392 Afer_1315 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109916.1 1367396 D 525909 CDS YP_003109917.1 256372093 8323393 1367722..1368600 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: amr:AM1_A0193 integrase, catalytic region; integrase catalytic subunit 1368600 8323393 Afer_1316 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109917.1 1367722 D 525909 CDS YP_003109918.1 256372094 8323396 complement(1369292..1370170) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: rha:RHA1_ro11026 transposase; integrase catalytic subunit 1370170 8323396 Afer_1319 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003109918.1 1369292 R 525909 CDS YP_003109919.1 256372095 8323397 complement(1370167..1370496) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_2226 transposase IS3/IS911; transposase IS3/IS911 family protein 1370496 8323397 Afer_1320 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003109919.1 1370167 R 525909 CDS YP_003109920.1 256372096 8323398 complement(1371434..1372252) 1 NC_013124.1 KEGG: fre:Franean1_5518 integrase family protein; integrase family protein 1372252 8323398 Afer_1321 Acidimicrobium ferrooxidans DSM 10331 integrase family protein YP_003109920.1 1371434 R 525909 CDS YP_003109921.1 256372097 8323400 1372485..1374932 1 NC_013124.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: dau:Daud_1865 leucyl-tRNA synthetase; leucyl-tRNA synthetase 1374932 8323400 Afer_1322 Acidimicrobium ferrooxidans DSM 10331 leucyl-tRNA synthetase YP_003109921.1 1372485 D 525909 CDS YP_003109922.1 256372098 8323401 1375029..1376555 1 NC_013124.1 PFAM: transposase IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein; transposase IS4 family protein 1376555 8323401 Afer_1323 Acidimicrobium ferrooxidans DSM 10331 transposase IS4 family protein YP_003109922.1 1375029 D 525909 CDS YP_003109923.1 256372099 8323403 complement(1377379..1378044) 1 NC_013124.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: sco:SCO2328 dipeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 1378044 8323403 Afer_1324 Acidimicrobium ferrooxidans DSM 10331 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_003109923.1 1377379 R 525909 CDS YP_003109924.1 256372100 8323404 complement(1378106..1379500) 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: mmi:MMAR_2052 amino acid transporter; amino acid permease-associated protein 1379500 8323404 Afer_1325 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003109924.1 1378106 R 525909 CDS YP_003109925.1 256372101 8323405 1379635..1380429 1 NC_013124.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: msm:MSMEG_2682 transcriptional regulator; GntR family transcriptional regulator 1380429 8323405 Afer_1326 Acidimicrobium ferrooxidans DSM 10331 GntR family transcriptional regulator YP_003109925.1 1379635 D 525909 CDS YP_003109926.1 256372102 8323406 complement(1380597..1381763) 1 NC_013124.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tfu:Tfu_1763 ABC-type sugar transport systems ATPase components; ABC transporter-like protein 1381763 8323406 Afer_1327 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109926.1 1380597 R 525909 CDS YP_003109927.1 256372103 8323407 complement(1381772..1383412) 1 NC_013124.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bra:BRADO0511 alpha-glucosidase; alpha amylase catalytic subunit 1383412 8323407 Afer_1328 Acidimicrobium ferrooxidans DSM 10331 alpha amylase catalytic subunit YP_003109927.1 1381772 R 525909 CDS YP_003109928.1 256372104 8323408 complement(1383428..1384267) 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sen:SACE_6264 multiple sugar transport system permease protein; binding-protein-dependent transport systems inner membrane component 1384267 8323408 Afer_1329 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109928.1 1383428 R 525909 CDS YP_003109929.1 256372105 8323409 complement(1384267..1385217) 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sen:SACE_6263 ABC sugar transporter, permease component; binding-protein-dependent transport systems inner membrane component 1385217 8323409 Afer_1330 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109929.1 1384267 R 525909 CDS YP_003109930.1 256372106 8323410 complement(1385356..1386750) 1 NC_013124.1 PFAM: extracellular solute-binding protein family 1; KEGG: sen:SACE_6262 ABC transporter substrate-binding protein; family 1 extracellular solute-binding protein 1386750 8323410 Afer_1331 Acidimicrobium ferrooxidans DSM 10331 family 1 extracellular solute-binding protein YP_003109930.1 1385356 R 525909 CDS YP_003109931.1 256372107 8323411 complement(1386814..1387947) 1 NC_013124.1 KEGG: nca:Noca_3918 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1387947 8323411 Afer_1332 Acidimicrobium ferrooxidans DSM 10331 LacI family transcriptional regulator YP_003109931.1 1386814 R 525909 CDS YP_003109932.1 256372108 8323412 complement(1388637..1389095) 1 NC_013124.1 KEGG: glo:Glov_2391 drug resistance transporter, EmrB/QacA subfamily; hypothetical protein 1389095 8323412 Afer_1333 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109932.1 1388637 R 525909 CDS YP_003109933.1 256372109 8323413 1389178..1390185 1 NC_013124.1 KEGG: rso:RSc1428 hypothetical protein; hypothetical protein 1390185 8323413 Afer_1334 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109933.1 1389178 D 525909 CDS YP_003109934.1 256372110 8323415 complement(1390837..1391454) 1 NC_013124.1 TIGRFAM: serine O-acetyltransferase; KEGG: mmi:MMAR_3646 serine acetyltransferase CysE; serine O-acetyltransferase 1391454 8323415 Afer_1335 Acidimicrobium ferrooxidans DSM 10331 serine O-acetyltransferase YP_003109934.1 1390837 R 525909 CDS YP_003109935.1 256372111 8323416 complement(1391454..1392389) 1 NC_013124.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: fal:FRAAL3350 subunit of cysteine synthase A and O-acetylserine sulfhydrolase A, PLP-dependent enzyme; cysteine synthase A 1392389 8323416 Afer_1336 Acidimicrobium ferrooxidans DSM 10331 cysteine synthase A YP_003109935.1 1391454 R 525909 CDS YP_003109936.1 256372112 8323417 complement(1392480..1393364) 1 NC_013124.1 PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: mjl:Mjls_5132 HhH-GPD family protein; HhH-GPD family protein 1393364 8323417 Afer_1337 Acidimicrobium ferrooxidans DSM 10331 HhH-GPD family protein YP_003109936.1 1392480 R 525909 CDS YP_003109937.1 256372113 8323418 1393608..1394300 1 NC_013124.1 SMART: regulatory protein ArsR; KEGG: stp:Strop_2302 regulatory protein, ArsR; transcriptional regulator 1394300 8323418 Afer_1338 Acidimicrobium ferrooxidans DSM 10331 transcriptional regulator YP_003109937.1 1393608 D 525909 CDS YP_003109938.1 256372114 8323419 1394297..1395586 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_2289 major facilitator transporter; major facilitator superfamily protein 1395586 8323419 Afer_1339 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109938.1 1394297 D 525909 CDS YP_003109939.1 256372115 8323420 complement(1395785..1396729) 1 NC_013124.1 KEGG: MUC17; mucin 17, cell surface associated; hypothetical protein 1396729 8323420 Afer_1340 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109939.1 1395785 R 525909 CDS YP_003109940.1 256372116 8323421 complement(1397197..1397580) 1 NC_013124.1 PFAM: protein of unknown function DUF86; KEGG: mla:Mlab_0885 hypothetical protein; hypothetical protein 1397580 8323421 Afer_1341 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109940.1 1397197 R 525909 CDS YP_003109941.1 256372117 8323422 complement(1397549..1397884) 1 NC_013124.1 PFAM: DNA polymerase beta domain protein region; KEGG: rca:Rcas_2416 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein 1397884 8323422 Afer_1342 Acidimicrobium ferrooxidans DSM 10331 DNA polymerase beta domain-containing protein YP_003109941.1 1397549 R 525909 CDS YP_003109942.1 256372118 8323424 complement(1398363..1399463) 1 NC_013124.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: glo:Glov_1832 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1399463 8323424 Afer_1343 Acidimicrobium ferrooxidans DSM 10331 methyl-accepting chemotaxis sensory transducer YP_003109942.1 1398363 R 525909 CDS YP_003109943.1 256372119 8323425 complement(1399614..1400549) 1 NC_013124.1 PFAM: beta-lactamase domain protein; KEGG: sma:SAV_6616 polyketide cyclase; beta-lactamase domain-containing protein 1400549 8323425 Afer_1344 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase domain-containing protein YP_003109943.1 1399614 R 525909 CDS YP_003109944.1 256372120 8323426 complement(1400539..1400736) 1 NC_013124.1 hypothetical protein 1400736 8323426 Afer_1345 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109944.1 1400539 R 525909 CDS YP_003109945.1 256372121 8323427 complement(1400775..1402301) 1 NC_013124.1 PFAM: carboxyl transferase; KEGG: saq:Sare_0033 propionyl-CoA carboxylase; Propionyl-CoA carboxylase 1402301 8323427 Afer_1346 Acidimicrobium ferrooxidans DSM 10331 Propionyl-CoA carboxylase YP_003109945.1 1400775 R 525909 CDS YP_003109946.1 256372122 8323428 complement(1402317..1403606) 1 NC_013124.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: ace:Acel_1233 small GTP-binding protein; small GTP-binding protein 1403606 8323428 Afer_1347 Acidimicrobium ferrooxidans DSM 10331 small GTP-binding protein YP_003109946.1 1402317 R 525909 CDS YP_003109947.1 256372123 8323429 complement(1403603..1404955) 1 NC_013124.1 PFAM: protein of unknown function DUF512; KEGG: syw:SYNW2188 Fe-S oxidoreductase; hypothetical protein 1404955 8323429 Afer_1348 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109947.1 1403603 R 525909 CDS YP_003109948.1 256372124 8323430 1405015..1406049 1 NC_013124.1 KEGG: ace:Acel_1858 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 1406049 8323430 Afer_1349 Acidimicrobium ferrooxidans DSM 10331 hydroxymethylbutenyl pyrophosphate reductase YP_003109948.1 1405015 D 525909 CDS YP_003109949.1 256372125 8323431 complement(1406073..1406840) 1 NC_013124.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: syn:sll1848 1-acyl-sn-glycerol-3- phosphate acyltransferase; phospholipid/glycerol acyltransferase 1406840 8323431 Afer_1350 Acidimicrobium ferrooxidans DSM 10331 phospholipid/glycerol acyltransferase YP_003109949.1 1406073 R 525909 CDS YP_003109950.1 256372126 8323432 complement(1406837..1407439) 1 NC_013124.1 PFAM: cytidylate kinase region; KEGG: mul:MUL_3233 cytidylate kinase; cytidylate kinase 1407439 8323432 Afer_1351 Acidimicrobium ferrooxidans DSM 10331 cytidylate kinase YP_003109950.1 1406837 R 525909 CDS YP_003109951.1 256372127 8323433 1407631..1408584 1 NC_013124.1 metalloprotease; heat shock protein HtpX 1408584 8323433 Afer_1352 Acidimicrobium ferrooxidans DSM 10331 heat shock protein HtpX YP_003109951.1 1407631 D 525909 CDS YP_003109952.1 256372128 8323434 1408587..1409192 1 NC_013124.1 KEGG: ace:Acel_0953 hypothetical protein; hypothetical protein 1409192 8323434 Afer_1353 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109952.1 1408587 D 525909 CDS YP_003109953.1 256372129 8323435 complement(1409189..1410493) 1 NC_013124.1 KEGG: syr:SynRCC307_1150 3-phosphoshikimate 1- carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 1410493 8323435 Afer_1354 Acidimicrobium ferrooxidans DSM 10331 3-phosphoshikimate 1-carboxyvinyltransferase YP_003109953.1 1409189 R 525909 CDS YP_003109954.1 256372130 8323436 complement(1410503..1410865) 1 NC_013124.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: nca:Noca_2499 chorismate mutase; chorismate mutase 1410865 8323436 Afer_1355 Acidimicrobium ferrooxidans DSM 10331 chorismate mutase YP_003109954.1 1410503 R 525909 CDS YP_003109955.1 256372131 8323437 complement(1410828..1411592) 1 NC_013124.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: krh:KRH_15230 pseudouridine synthase; pseudouridine synthase 1411592 8323437 Afer_1356 Acidimicrobium ferrooxidans DSM 10331 pseudouridine synthase YP_003109955.1 1410828 R 525909 CDS YP_003109956.1 256372132 8323438 complement(1411589..1412155) 1 NC_013124.1 PFAM: chromosome segregation and condensation protein ScpB; KEGG: ace:Acel_1237 condensin subunit ScpB; chromosome segregation and condensation protein ScpB 1412155 8323438 Afer_1357 Acidimicrobium ferrooxidans DSM 10331 chromosome segregation and condensation protein ScpB YP_003109956.1 1411589 R 525909 CDS YP_003109957.1 256372133 8323439 complement(1412148..1412843) 1 NC_013124.1 KEGG: cmi:CMM_1979 hypothetical protein; hypothetical protein 1412843 8323439 Afer_1358 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109957.1 1412148 R 525909 CDS YP_003109958.1 256372134 8323440 complement(1412821..1413324) 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_3222 acetyltransferase, GNAT family; GCN5-like N-acetyltransferase 1413324 8323440 Afer_1359 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003109958.1 1412821 R 525909 CDS YP_003109959.1 256372135 8323441 complement(1413377..1414636) 1 NC_013124.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ank:AnaeK_2951 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein 1414636 8323441 Afer_1360 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109959.1 1413377 R 525909 CDS YP_003109960.1 256372136 8323442 complement(1414633..1415724) 1 NC_013124.1 PFAM: FAD linked oxidase domain protein; KEGG: cyb:CYB_2695 FAD-binding protein; FAD linked oxidase domain-containing protein 1415724 8323442 Afer_1361 Acidimicrobium ferrooxidans DSM 10331 FAD linked oxidase domain-containing protein YP_003109960.1 1414633 R 525909 CDS YP_003109961.1 256372137 8323443 complement(1415718..1417184) 1 NC_013124.1 PFAM: FAD linked oxidase domain protein; KEGG: sen:SACE_6366 glycolate oxidase subunit; FAD linked oxidase domain-containing protein 1417184 8323443 Afer_1362 Acidimicrobium ferrooxidans DSM 10331 FAD linked oxidase domain-containing protein YP_003109961.1 1415718 R 525909 CDS YP_003109962.1 256372138 8323444 1417237..1417989 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: afw:Anae109_1109 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1417989 8323444 Afer_1363 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003109962.1 1417237 D 525909 CDS YP_003109963.1 256372139 8323445 1418126..1419160 1 NC_013124.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pac:PPA0955 deoxyguanosinetriphosphate triphosphohydrolase; metal-dependent phosphohydrolase HD subdomain-containing protein 1419160 8323445 Afer_1364 Acidimicrobium ferrooxidans DSM 10331 metal-dependent phosphohydrolase HD subdomain-containing protein YP_003109963.1 1418126 D 525909 CDS YP_003109964.1 256372140 8323446 1419197..1419748 1 NC_013124.1 PFAM: transcriptional regulator PadR family protein; KEGG: sgr:SGR_6165 PadR-like family transcriptional regulator; PadR family transcriptional regulator 1419748 8323446 Afer_1365 Acidimicrobium ferrooxidans DSM 10331 PadR family transcriptional regulator YP_003109964.1 1419197 D 525909 CDS YP_003109965.1 256372141 8323447 complement(1419836..1420177) 1 NC_013124.1 PFAM: protein of unknown function DUF1291; KEGG: sto:ST0089 hypothetical protein; hypothetical protein 1420177 8323447 Afer_1366 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109965.1 1419836 R 525909 CDS YP_003109966.1 256372142 8323448 1420430..1421938 1 NC_013124.1 PFAM: AMP-dependent synthetase and ligase; KEGG: abo:ABO_0184 long-chain-fatty-acid-CoA ligase; AMP-dependent synthetase and ligase 1421938 8323448 Afer_1367 Acidimicrobium ferrooxidans DSM 10331 AMP-dependent synthetase and ligase YP_003109966.1 1420430 D 525909 CDS YP_003109967.1 256372143 8323449 1422011..1422334 1 NC_013124.1 PFAM: protein of unknown function DUF74; KEGG: mmi:MMAR_5292 hypothetical protein; hypothetical protein 1422334 8323449 Afer_1368 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109967.1 1422011 D 525909 CDS YP_003109968.1 256372144 8323450 complement(1422417..1422665) 1 NC_013124.1 KEGG: nfa:pnf2670 hypothetical protein; hypothetical protein 1422665 8323450 Afer_1369 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109968.1 1422417 R 525909 CDS YP_003109969.1 256372145 8323451 complement(1422819..1424018) 1 NC_013124.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: stp:Strop_1359 beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase 1424018 8323451 Afer_1370 Acidimicrobium ferrooxidans DSM 10331 acetyl-CoA acetyltransferase YP_003109969.1 1422819 R 525909 CDS YP_003109970.1 256372146 8323452 complement(1424015..1424452) 1 NC_013124.1 TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: pde:Pden_4800 phenylacetic acid degradation protein PaaD; phenylacetic acid degradation protein PaaD 1424452 8323452 Afer_1371 Acidimicrobium ferrooxidans DSM 10331 phenylacetic acid degradation protein PaaD YP_003109970.1 1424015 R 525909 CDS YP_003109971.1 256372147 8323453 complement(1424449..1425081) 1 NC_013124.1 PFAM: regulatory protein TetR; KEGG: lch:Lcho_2402 TetR family transcriptional regulator; TetR family transcriptional regulator 1425081 8323453 Afer_1372 Acidimicrobium ferrooxidans DSM 10331 TetR family transcriptional regulator YP_003109971.1 1424449 R 525909 CDS YP_003109972.1 256372148 8323454 complement(1425078..1425878) 1 NC_013124.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: krh:KRH_02100 enoyl-CoA hydratase PaaG; enoyl-CoA hydratase/isomerase 1425878 8323454 Afer_1373 Acidimicrobium ferrooxidans DSM 10331 enoyl-CoA hydratase/isomerase YP_003109972.1 1425078 R 525909 CDS YP_003109973.1 256372149 8323455 complement(1425884..1426672) 1 NC_013124.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_0164 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1426672 8323455 Afer_1374 Acidimicrobium ferrooxidans DSM 10331 enoyl-CoA hydratase/isomerase YP_003109973.1 1425884 R 525909 CDS YP_003109974.1 256372150 8323456 complement(1426666..1427532) 1 NC_013124.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: ace:Acel_0147 3-hydroxyacyl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 1427532 8323456 Afer_1375 Acidimicrobium ferrooxidans DSM 10331 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_003109974.1 1426666 R 525909 CDS YP_003109975.1 256372151 8323457 complement(1427505..1428512) 1 NC_013124.1 KEGG: dar:Daro_0369 hypothetical protein; hypothetical protein 1428512 8323457 Afer_1376 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109975.1 1427505 R 525909 CDS YP_003109976.1 256372152 8323458 1428619..1429653 1 NC_013124.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dar:Daro_0368 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; ferredoxin 1429653 8323458 Afer_1377 Acidimicrobium ferrooxidans DSM 10331 ferredoxin YP_003109976.1 1428619 D 525909 CDS YP_003109977.1 256372153 8323459 1429676..1432603 1 NC_013124.1 PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; KEGG: ote:Oter_0715 aldehyde dehydrogenase; aldehyde dehydrogenase 1432603 8323459 Afer_1378 Acidimicrobium ferrooxidans DSM 10331 aldehyde dehydrogenase YP_003109977.1 1429676 D 525909 CDS YP_003109978.1 256372154 8323460 1432739..1434055 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_3709 major facilitator transporter; major facilitator superfamily protein 1434055 8323460 Afer_1379 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003109978.1 1432739 D 525909 CDS YP_003109979.1 256372155 8323461 1434355..1435503 1 NC_013124.1 KEGG: msm:MSMEG_6524 ABC polyamine/opine/phosphonate transporter, periplasmic ligand binding protein; ABC polyamine/opine/phosphonate transporter, periplasmic ligand binding protein 1435503 8323461 Afer_1380 Acidimicrobium ferrooxidans DSM 10331 ABC polyamine/opine/phosphonate transporter, periplasmic ligand binding protein YP_003109979.1 1434355 D 525909 CDS YP_003109980.1 256372156 8323462 1435488..1436390 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_0983 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1436390 8323462 Afer_1381 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109980.1 1435488 D 525909 CDS YP_003109981.1 256372157 8323463 1436387..1437166 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_0516 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1437166 8323463 Afer_1382 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003109981.1 1436387 D 525909 CDS YP_003109982.1 256372158 8323464 1437175..1438281 1 NC_013124.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mva:Mvan_5739 ABC transporter-related protein; ABC transporter-like protein 1438281 8323464 Afer_1383 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003109982.1 1437175 D 525909 CDS YP_003109983.1 256372159 8323465 1438278..1439918 1 NC_013124.1 PFAM: metallophosphoesterase; KEGG: nca:Noca_3235 metallophosphoesterase; metallophosphoesterase 1439918 8323465 Afer_1384 Acidimicrobium ferrooxidans DSM 10331 metallophosphoesterase YP_003109983.1 1438278 D 525909 CDS YP_003109984.1 256372160 8323466 complement(1439915..1442722) 1 NC_013124.1 KEGG: afe:Lferr_1405 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 1442722 8323466 Afer_1385 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase/phosphodiesterase YP_003109984.1 1439915 R 525909 CDS YP_003109985.1 256372161 8323468 1443317..1443865 1 NC_013124.1 KEGG: predicted gene, 100039767; hypothetical protein 1443865 8323468 Afer_1386 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109985.1 1443317 D 525909 CDS YP_003109986.1 256372162 8323469 complement(1444024..1445550) 1 NC_013124.1 PFAM: transposase IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein; transposase IS4 family protein 1445550 8323469 Afer_1387 Acidimicrobium ferrooxidans DSM 10331 transposase IS4 family protein YP_003109986.1 1444024 R 525909 CDS YP_003109987.1 256372163 8323470 complement(1445636..1446256) 1 NC_013124.1 KEGG: nfa:nfa2450 hypothetical protein; hypothetical protein 1446256 8323470 Afer_1388 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109987.1 1445636 R 525909 CDS YP_003109988.1 256372164 8323472 1447912..1448160 1 NC_013124.1 hypothetical protein 1448160 8323472 Afer_1390 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109988.1 1447912 D 525909 CDS YP_003109989.1 256372165 8323473 complement(1448275..1448463) 1 NC_013124.1 hypothetical protein 1448463 8323473 Afer_1391 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109989.1 1448275 R 525909 CDS YP_003109990.1 256372166 8323475 complement(1449743..1452724) 1 NC_013124.1 PFAM: type III restriction protein res subunit; KEGG: cte:CT0911 type III restriction system endonuclease; type III restriction protein res subunit 1452724 8323475 Afer_1393 Acidimicrobium ferrooxidans DSM 10331 type III restriction protein res subunit YP_003109990.1 1449743 R 525909 CDS YP_003109991.1 256372167 8323476 complement(1452724..1454679) 1 NC_013124.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bpt:Bpet4236 type III restriction system methylase; DNA methylase N-4/N-6 domain-containing protein 1454679 8323476 Afer_1394 Acidimicrobium ferrooxidans DSM 10331 DNA methylase N-4/N-6 domain-containing protein YP_003109991.1 1452724 R 525909 CDS YP_003109992.1 256372168 8323477 complement(1454691..1455449) 1 NC_013124.1 KEGG: pph:Ppha_1127 hypothetical protein; hypothetical protein 1455449 8323477 Afer_1395 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109992.1 1454691 R 525909 CDS YP_003109993.1 256372169 8323478 complement(1455446..1458643) 1 NC_013124.1 PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicases; KEGG: cte:CT0906 DNA-dependent ATPase, SNF2 family protein; helicase domain-containing protein 1458643 8323478 Afer_1396 Acidimicrobium ferrooxidans DSM 10331 helicase domain-containing protein YP_003109993.1 1455446 R 525909 CDS YP_003109994.1 256372170 8323479 complement(1458651..1459880) 1 NC_013124.1 hypothetical protein 1459880 8323479 Afer_1397 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109994.1 1458651 R 525909 CDS YP_003109995.1 256372171 8323480 complement(1460181..1460696) 1 NC_013124.1 PFAM: GETHR pentapeptide repeat-containing protein; KEGG: fal:FRAAL3726 pentapeptide repeat-containing protein; GETHR pentapeptide repeat-containing protein 1460696 8323480 Afer_1398 Acidimicrobium ferrooxidans DSM 10331 GETHR pentapeptide repeat-containing protein YP_003109995.1 1460181 R 525909 CDS YP_003109996.1 256372172 8323481 complement(1460962..1462488) 1 NC_013124.1 PFAM: transposase IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein; transposase IS4 family protein 1462488 8323481 Afer_1399 Acidimicrobium ferrooxidans DSM 10331 transposase IS4 family protein YP_003109996.1 1460962 R 525909 CDS YP_003109997.1 256372173 8323482 complement(1462585..1463679) 1 NC_013124.1 KEGG: ace:Acel_1702 secreted protein; hypothetical protein 1463679 8323482 Afer_1400 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003109997.1 1462585 R 525909 CDS YP_003109998.1 256372174 8323483 complement(1463720..1464679) 1 NC_013124.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: azo:azo1486 conserved hypothetical signaling protein; diguanylate phosphodiesterase 1464679 8323483 Afer_1401 Acidimicrobium ferrooxidans DSM 10331 diguanylate phosphodiesterase YP_003109998.1 1463720 R 525909 CDS YP_003109999.1 256372175 8323484 complement(1464676..1465794) 1 NC_013124.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: fal:FRAAL5844 hypothetical protein; diguanylate phosphodiesterase 1465794 8323484 Afer_1402 Acidimicrobium ferrooxidans DSM 10331 diguanylate phosphodiesterase YP_003109999.1 1464676 R 525909 CDS YP_003110000.1 256372176 8323485 1466256..1466705 1 NC_013124.1 KEGG: cma:Cmaq_0484 hypothetical protein; hypothetical protein 1466705 8323485 Afer_1403 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110000.1 1466256 D 525909 CDS YP_003110001.1 256372177 8323486 1466762..1467019 1 NC_013124.1 KEGG: kcr:Kcr_1535 SirA family protein; SirA family protein 1467019 8323486 Afer_1404 Acidimicrobium ferrooxidans DSM 10331 SirA family protein YP_003110001.1 1466762 D 525909 CDS YP_003110002.1 256372178 8323487 1467021..1468199 1 NC_013124.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cma:Cmaq_0486 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1468199 8323487 Afer_1405 Acidimicrobium ferrooxidans DSM 10331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003110002.1 1467021 D 525909 CDS YP_003110003.1 256372179 8323488 complement(1468240..1468497) 1 NC_013124.1 hypothetical protein 1468497 8323488 Afer_1406 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110003.1 1468240 R 525909 CDS YP_003110004.1 256372180 8323490 complement(1469510..1469899) 1 NC_013124.1 PFAM: protein of unknown function DUF488; KEGG: afe:Lferr_0982 protein of unknown function DUF488; hypothetical protein 1469899 8323490 Afer_1407 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110004.1 1469510 R 525909 CDS YP_003110005.1 256372181 8323491 complement(1469921..1472188) 1 NC_013124.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1472188 8323491 Afer_1408 Acidimicrobium ferrooxidans DSM 10331 aconitate hydratase YP_003110005.1 1469921 R 525909 CDS YP_003110006.1 256372182 8323492 1472262..1473020 1 NC_013124.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sgr:SGR_1276 GntR family transcriptional regulator; GntR family transcriptional regulator 1473020 8323492 Afer_1409 Acidimicrobium ferrooxidans DSM 10331 GntR family transcriptional regulator YP_003110006.1 1472262 D 525909 CDS YP_003110007.1 256372183 8323493 1473106..1474482 1 NC_013124.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: acr:Acry_2484 permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease 1474482 8323493 Afer_1410 Acidimicrobium ferrooxidans DSM 10331 cytosine/purines uracil thiamine allantoin permease YP_003110007.1 1473106 D 525909 CDS YP_003110008.1 256372184 8323494 1474479..1475327 1 NC_013124.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rxy:Rxyl_0574 RpiR family transcriptional regulator; RpiR family transcriptional regulator 1475327 8323494 Afer_1411 Acidimicrobium ferrooxidans DSM 10331 RpiR family transcriptional regulator YP_003110008.1 1474479 D 525909 CDS YP_003110009.1 256372185 8323495 1475324..1476505 1 NC_013124.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1476505 8323495 Afer_1412 Acidimicrobium ferrooxidans DSM 10331 allantoate amidohydrolase YP_003110009.1 1475324 D 525909 CDS YP_003110010.1 256372186 8323496 1476502..1477812 1 NC_013124.1 PFAM: amidohydrolase; KEGG: kra:Krad_4451 N-formimino-L-glutamate deiminase; amidohydrolase 1477812 8323496 Afer_1413 Acidimicrobium ferrooxidans DSM 10331 amidohydrolase YP_003110010.1 1476502 D 525909 CDS YP_003110011.1 256372187 8323497 1477809..1479467 1 NC_013124.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1479467 8323497 Afer_1414 Acidimicrobium ferrooxidans DSM 10331 urocanate hydratase YP_003110011.1 1477809 D 525909 CDS YP_003110012.1 256372188 8323498 1479455..1480654 1 NC_013124.1 KEGG: mmr:Mmar10_1604 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3; imidazolonepropionase 1480654 8323498 Afer_1415 Acidimicrobium ferrooxidans DSM 10331 imidazolonepropionase YP_003110012.1 1479455 D 525909 CDS YP_003110013.1 256372189 8323499 complement(1480972..1481496) 1 NC_013124.1 TIGRFAM: phage tail protein; KEGG: fre:Franean1_3826 phage tail protein; phage tail protein 1481496 8323499 Afer_1416 Acidimicrobium ferrooxidans DSM 10331 phage tail protein YP_003110013.1 1480972 R 525909 CDS YP_003110014.1 256372190 8323500 complement(1481505..1483457) 1 NC_013124.1 KEGG: sco:SCO4244 hypothetical protein; hypothetical protein 1483457 8323500 Afer_1417 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110014.1 1481505 R 525909 CDS YP_003110015.1 256372191 8323501 complement(1483457..1483894) 1 NC_013124.1 PFAM: GPW/gp25 family protein; KEGG: sgr:SGR_2075 hypothetical protein; GPW/gp25 family protein 1483894 8323501 Afer_1418 Acidimicrobium ferrooxidans DSM 10331 GPW/gp25 family protein YP_003110015.1 1483457 R 525909 CDS YP_003110016.1 256372192 8323502 complement(1483925..1486573) 1 NC_013124.1 KEGG: ade:Adeh_0244 LigA; hypothetical protein 1486573 8323502 Afer_1419 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110016.1 1483925 R 525909 CDS YP_003110017.1 256372193 8323503 complement(1486570..1487046) 1 NC_013124.1 TIGRFAM: conserved hypothetical protein; KEGG: gsu:GSU0979 hypothetical protein; hypothetical protein 1487046 8323503 Afer_1420 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110017.1 1486570 R 525909 CDS YP_003110018.1 256372194 8323504 complement(1487043..1487216) 1 NC_013124.1 KEGG: mlo:msr6553 hypothetical protein; hypothetical protein 1487216 8323504 Afer_1421 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110018.1 1487043 R 525909 CDS YP_003110019.1 256372195 8323505 complement(1487213..1487686) 1 NC_013124.1 KEGG: fre:Franean1_3818 secreted protein; hypothetical protein 1487686 8323505 Afer_1422 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110019.1 1487213 R 525909 CDS YP_003110020.1 256372196 8323506 complement(1487690..1488172) 1 NC_013124.1 TIGRFAM: conserved hypothetical protein; KEGG: fre:Franean1_3817 phage tail protein; hypothetical protein 1488172 8323506 Afer_1423 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110020.1 1487690 R 525909 CDS YP_003110021.1 256372197 8323507 complement(1488188..1489756) 1 NC_013124.1 PFAM: tail sheath protein; KEGG: fre:Franean1_3816 tail sheath protein; tail sheath protein 1489756 8323507 Afer_1424 Acidimicrobium ferrooxidans DSM 10331 tail sheath protein YP_003110021.1 1488188 R 525909 CDS YP_003110022.1 256372198 8323508 1490131..1490511 1 NC_013124.1 KEGG: mbb:BCG_0973 resolvase; resolvase 1490511 8323508 Afer_1425 Acidimicrobium ferrooxidans DSM 10331 resolvase YP_003110022.1 1490131 D 525909 CDS YP_003110023.1 256372199 8323509 1490508..1490753 1 NC_013124.1 KEGG: blj:BLD_1224 site-specific integrase- resolvase; site-specific integrase-resolvase-like protein 1490753 8323509 Afer_1426 Acidimicrobium ferrooxidans DSM 10331 site-specific integrase-resolvase-like protein YP_003110023.1 1490508 D 525909 CDS YP_003110024.1 256372200 8323510 1490770..1492458 1 NC_013124.1 TIGRFAM: transposase, IS605 OrfB family; KEGG: sma:SAV_5958 hypothetical protein; transposase, IS605 OrfB family 1492458 8323510 Afer_1427 Acidimicrobium ferrooxidans DSM 10331 transposase, IS605 OrfB family YP_003110024.1 1490770 D 525909 CDS YP_003110025.1 256372201 8323511 1492877..1493941 1 NC_013124.1 KEGG: gw1.XVI.1206.1.; hypothetical protein 1493941 8323511 Afer_1428 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110025.1 1492877 D 525909 CDS YP_003110026.1 256372202 8323512 complement(1493948..1494859) 1 NC_013124.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: fre:Franean1_4167 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1494859 8323512 Afer_1429 Acidimicrobium ferrooxidans DSM 10331 phospholipid/glycerol acyltransferase YP_003110026.1 1493948 R 525909 CDS YP_003110027.1 256372203 8323513 complement(1494856..1496454) 1 NC_013124.1 KEGG: nca:Noca_2000 hypothetical protein; hypothetical protein 1496454 8323513 Afer_1430 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110027.1 1494856 R 525909 CDS YP_003110028.1 256372204 8323514 complement(1496455..1497657) 1 NC_013124.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: fre:Franean1_4169 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 1497657 8323514 Afer_1431 Acidimicrobium ferrooxidans DSM 10331 alcohol dehydrogenase zinc-binding domain-containing protein YP_003110028.1 1496455 R 525909 CDS YP_003110029.1 256372205 8323515 complement(1497654..1499966) 1 NC_013124.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Male sterility domain; Haloacid dehalogenase domain protein hydrolase; NAD-dependent epimerase/dehydratase; KEGG: fal:FRAAL3759 fatty acyl CoA reductase; HAD-superfamily hydrolase 1499966 8323515 Afer_1432 Acidimicrobium ferrooxidans DSM 10331 HAD-superfamily hydrolase YP_003110029.1 1497654 R 525909 CDS YP_003110030.1 256372206 8323516 complement(1500025..1500579) 1 NC_013124.1 hypothetical protein 1500579 8323516 Afer_1433 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110030.1 1500025 R 525909 CDS YP_003110031.1 256372207 8323517 1500713..1502095 1 NC_013124.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mse:Msed_0866 general substrate transporter; General substrate transporter 1502095 8323517 Afer_1434 Acidimicrobium ferrooxidans DSM 10331 General substrate transporter YP_003110031.1 1500713 D 525909 CDS YP_003110032.1 256372208 8323518 complement(1502521..1503120) 1 NC_013124.1 PFAM: ThiJ/PfpI domain protein; KEGG: cjk:jk0046 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 1503120 8323518 Afer_1435 Acidimicrobium ferrooxidans DSM 10331 ThiJ/PfpI domain-containing protein YP_003110032.1 1502521 R 525909 CDS YP_003110033.1 256372209 8323519 1503464..1504183 1 NC_013124.1 hypothetical protein 1504183 8323519 Afer_1436 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110033.1 1503464 D 525909 CDS YP_003110034.1 256372210 8323520 complement(1504235..1505797) 1 NC_013124.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: fal:FRAAL2360 transmembrane efflux protein; EmrB/QacA subfamily drug resistance transporter 1505797 8323520 Afer_1437 Acidimicrobium ferrooxidans DSM 10331 EmrB/QacA subfamily drug resistance transporter YP_003110034.1 1504235 R 525909 CDS YP_003110035.1 256372211 8323521 1505941..1506558 1 NC_013124.1 PFAM: regulatory protein TetR; KEGG: sco:SCO4167 TetR family transcriptional regulator; TetR family transcriptional regulator 1506558 8323521 Afer_1438 Acidimicrobium ferrooxidans DSM 10331 TetR family transcriptional regulator YP_003110035.1 1505941 D 525909 CDS YP_003110036.1 256372212 8323522 complement(1506512..1506889) 1 NC_013124.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: mmi:MMAR_p13 transcriptional repressor protein, MerR; ArsR family transcriptional regulator 1506889 8323522 Afer_1439 Acidimicrobium ferrooxidans DSM 10331 ArsR family transcriptional regulator YP_003110036.1 1506512 R 525909 CDS YP_003110037.1 256372213 8323524 complement(1508166..1508873) 1 NC_013124.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: nfa:nfa3010 cobyric acid synthase; CobB/CobQ domain-containing protein glutamine amidotransferase 1508873 8323524 Afer_1441 Acidimicrobium ferrooxidans DSM 10331 CobB/CobQ domain-containing protein glutamine amidotransferase YP_003110037.1 1508166 R 525909 CDS YP_003110038.1 256372214 8323525 complement(1508870..1510096) 1 NC_013124.1 PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: mjl:Mjls_5269 hypothetical protein; hypothetical protein 1510096 8323525 Afer_1442 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110038.1 1508870 R 525909 CDS YP_003110039.1 256372215 8323526 1510408..1511352 1 NC_013124.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: fal:FRAAL4491 oxidative stress transcriptional regulator; LysR family transcriptional regulator 1511352 8323526 Afer_1443 Acidimicrobium ferrooxidans DSM 10331 LysR family transcriptional regulator YP_003110039.1 1510408 D 525909 CDS YP_003110040.1 256372216 8323527 1511491..1512420 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nca:Noca_4120 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1512420 8323527 Afer_1444 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003110040.1 1511491 D 525909 CDS YP_003110041.1 256372217 8323528 1512454..1513101 1 NC_013124.1 PFAM: PhoU family protein; KEGG: sco:SCO4228 phosphate transport system regulator; phosphate uptake regulator PhoU 1513101 8323528 Afer_1445 Acidimicrobium ferrooxidans DSM 10331 phosphate uptake regulator PhoU YP_003110041.1 1512454 D 525909 CDS YP_003110042.1 256372218 8323529 complement(1513109..1513780) 1 NC_013124.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sgr:SGR_3764 two-component system response regulator; LuxR family two component transcriptional regulator 1513780 8323529 Afer_1446 Acidimicrobium ferrooxidans DSM 10331 LuxR family two component transcriptional regulator YP_003110042.1 1513109 R 525909 CDS YP_003110043.1 256372219 8323530 complement(1513836..1514279) 1 NC_013124.1 PFAM: UspA domain protein; KEGG: saq:Sare_1532 UspA domain-containing protein; UspA domain-containing protein 1514279 8323530 Afer_1447 Acidimicrobium ferrooxidans DSM 10331 UspA domain-containing protein YP_003110043.1 1513836 R 525909 CDS YP_003110044.1 256372220 8323531 1514384..1515664 1 NC_013124.1 KEGG: fre:Franean1_0153 major facilitator transporter; major facilitator transporter 1515664 8323531 Afer_1448 Acidimicrobium ferrooxidans DSM 10331 major facilitator transporter YP_003110044.1 1514384 D 525909 CDS YP_003110045.1 256372221 8323532 1515721..1516893 1 NC_013124.1 KEGG: afw:Anae109_1816 hypothetical protein; hypothetical protein 1516893 8323532 Afer_1449 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110045.1 1515721 D 525909 CDS YP_003110046.1 256372222 8323533 complement(1517617..1519905) 1 NC_013124.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY3404 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1519905 8323533 Afer_1450 Acidimicrobium ferrooxidans DSM 10331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003110046.1 1517617 R 525909 CDS YP_003110047.1 256372223 8323534 complement(1519917..1521467) 1 NC_013124.1 KEGG: mse:Msed_0469 hypothetical protein; cyclic nucleotide-binding protein 1521467 8323534 Afer_1451 Acidimicrobium ferrooxidans DSM 10331 cyclic nucleotide-binding protein YP_003110047.1 1519917 R 525909 CDS YP_003110048.1 256372224 8323535 1521568..1522389 1 NC_013124.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: glo:Glov_1241 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 1522389 8323535 Afer_1452 Acidimicrobium ferrooxidans DSM 10331 BadM/Rrf2 family transcriptional regulator YP_003110048.1 1521568 D 525909 CDS YP_003110049.1 256372225 8323536 complement(1522334..1522789) 1 NC_013124.1 PFAM: ferric-uptake regulator; KEGG: cts:Ctha_1302 ferric uptake regulator, Fur family; Fur family ferric uptake regulator 1522789 8323536 Afer_1453 Acidimicrobium ferrooxidans DSM 10331 Fur family ferric uptake regulator YP_003110049.1 1522334 R 525909 CDS YP_003110050.1 256372226 8323537 complement(1522782..1523720) 1 NC_013124.1 KEGG: hya:HY04AAS1_0184 hypothetical protein; hypothetical protein 1523720 8323537 Afer_1454 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110050.1 1522782 R 525909 CDS YP_003110051.1 256372227 8323538 1523920..1524888 1 NC_013124.1 PFAM: aldo/keto reductase; KEGG: bac:BamMC406_2130 aldo/keto reductase; aldo/keto reductase 1524888 8323538 Afer_1455 Acidimicrobium ferrooxidans DSM 10331 aldo/keto reductase YP_003110051.1 1523920 D 525909 CDS YP_003110052.1 256372228 8323539 1524999..1525724 1 NC_013124.1 KEGG: bpa:BPP4333 integral membrane protein; hypothetical protein 1525724 8323539 Afer_1456 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110052.1 1524999 D 525909 CDS YP_003110053.1 256372229 8323540 1525748..1526494 1 NC_013124.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: sco:SCO3340 hypothetical protein; type 12 methyltransferase 1526494 8323540 Afer_1457 Acidimicrobium ferrooxidans DSM 10331 type 12 methyltransferase YP_003110053.1 1525748 D 525909 CDS YP_003110054.1 256372230 8323541 1526496..1527896 1 NC_013124.1 PFAM: Amidase; KEGG: sen:SACE_2834 secreted amidase; Amidase 1527896 8323541 Afer_1458 Acidimicrobium ferrooxidans DSM 10331 Amidase YP_003110054.1 1526496 D 525909 CDS YP_003110055.1 256372231 8323542 1527893..1528360 1 NC_013124.1 KEGG: stp:Strop_0704 hypothetical protein; hypothetical protein 1528360 8323542 Afer_1459 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110055.1 1527893 D 525909 CDS YP_003110056.1 256372232 8323543 1528357..1530657 1 NC_013124.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein; KEGG: dau:Daud_0816 DEAD/DEAH box helicase domain- containing protein; DEAD/DEAH box helicase domain-containing protein 1530657 8323543 Afer_1460 Acidimicrobium ferrooxidans DSM 10331 DEAD/DEAH box helicase domain-containing protein YP_003110056.1 1528357 D 525909 CDS YP_003110057.1 256372233 8323544 complement(1530654..1531304) 1 NC_013124.1 KEGG: cya:CYA_0912 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; endonuclease III 1531304 8323544 Afer_1461 Acidimicrobium ferrooxidans DSM 10331 endonuclease III YP_003110057.1 1530654 R 525909 CDS YP_003110058.1 256372234 8323545 1531335..1532267 1 NC_013124.1 TIGRFAM: mycothiol biosynthesis acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: ace:Acel_2026 GCN5-related N- acetyltransferase; mycothiol biosynthesis acetyltransferase 1532267 8323545 Afer_1462 Acidimicrobium ferrooxidans DSM 10331 mycothiol biosynthesis acetyltransferase YP_003110058.1 1531335 D 525909 CDS YP_003110059.1 256372235 8323546 1532289..1533347 1 NC_013124.1 PFAM: aminotransferase class V; KEGG: stp:Strop_1799 aminotransferase, class V; class V aminotransferase 1533347 8323546 Afer_1463 Acidimicrobium ferrooxidans DSM 10331 class V aminotransferase YP_003110059.1 1532289 D 525909 CDS YP_003110060.1 256372236 8323547 complement(1534011..1534190) 1 NC_013124.1 hypothetical protein 1534190 8323547 Afer_1464 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110060.1 1534011 R 525909 CDS YP_003110061.1 256372237 8323548 complement(1534201..1534602) 1 NC_013124.1 KEGG: sgl:SG1539 hemin ABC transporter permease component; hypothetical protein 1534602 8323548 Afer_1465 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110061.1 1534201 R 525909 CDS YP_003110062.1 256372238 8323549 complement(1534563..1535081) 1 NC_013124.1 KEGG: bcj:BCAM0375 major facilitator superfamily protein; major facilitator superfamily protein 1535081 8323549 Afer_1466 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003110062.1 1534563 R 525909 CDS YP_003110063.1 256372239 8323550 1535224..1536651 1 NC_013124.1 PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Exonuclease; Excinuclease ABC C subunit domain protein; KEGG: ace:Acel_0968 hypothetical protein; Exonuclease RNase T and DNA polymerase III 1536651 8323550 Afer_1467 Acidimicrobium ferrooxidans DSM 10331 Exonuclease RNase T and DNA polymerase III YP_003110063.1 1535224 D 525909 CDS YP_003110064.1 256372240 8323551 complement(1536601..1537665) 1 NC_013124.1 KEGG: hmo:HM1_1918 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 1537665 8323551 Afer_1468 Acidimicrobium ferrooxidans DSM 10331 anthranilate phosphoribosyltransferase YP_003110064.1 1536601 R 525909 CDS YP_003110065.1 256372241 8323552 complement(1537652..1540072) 1 NC_013124.1 KEGG: eba:ebA6041 signal transducer protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 1540072 8323552 Afer_1469 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase/phosphodiesterase YP_003110065.1 1537652 R 525909 CDS YP_003110066.1 256372242 8323553 1540170..1542065 1 NC_013124.1 KEGG: cti:RALTA_B0100 diguanylate cyclase (GGDEAF) and C-di-GMP phosphodiesterase (EAL domain) with CHASE and PAS domains; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1542065 8323553 Afer_1470 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase YP_003110066.1 1540170 D 525909 CDS YP_003110067.1 256372243 8323554 complement(1542049..1543254) 1 NC_013124.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: sth:STH1253 acyl-CoA dehydrogenase, short- chain specific; acyl-CoA dehydrogenase domain-containing protein 1543254 8323554 Afer_1471 Acidimicrobium ferrooxidans DSM 10331 acyl-CoA dehydrogenase domain-containing protein YP_003110067.1 1542049 R 525909 CDS YP_003110068.1 256372244 8323555 1543397..1544803 1 NC_013124.1 PFAM: carbohydrate kinase FGGY; KEGG: rsq:Rsph17025_1200 glycerol kinase; Glycerol kinase 1544803 8323555 Afer_1472 Acidimicrobium ferrooxidans DSM 10331 Glycerol kinase YP_003110068.1 1543397 D 525909 CDS YP_003110069.1 256372245 8323556 complement(1544821..1545804) 1 NC_013124.1 KEGG: sus:Acid_7587 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1545804 8323556 Afer_1473 Acidimicrobium ferrooxidans DSM 10331 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003110069.1 1544821 R 525909 CDS YP_003110070.1 256372246 8323557 1545903..1546994 1 NC_013124.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: cms:CMS_0622 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK; phosphoribosylaminoimidazole carboxylase 1546994 8323557 Afer_1474 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylaminoimidazole carboxylase YP_003110070.1 1545903 D 525909 CDS YP_003110071.1 256372247 8323558 1546991..1547482 1 NC_013124.1 KEGG: mva:Mvan_1714 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit 1547482 8323558 Afer_1475 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_003110071.1 1546991 D 525909 CDS YP_003110072.1 256372248 8323559 1547451..1548200 1 NC_013124.1 KEGG: saq:Sare_3286 hypothetical protein; hypothetical protein 1548200 8323559 Afer_1476 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110072.1 1547451 D 525909 CDS YP_003110073.1 256372249 8323560 complement(1548704..1550230) 1 NC_013124.1 PFAM: transposase IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein; transposase IS4 family protein 1550230 8323560 Afer_1477 Acidimicrobium ferrooxidans DSM 10331 transposase IS4 family protein YP_003110073.1 1548704 R 525909 CDS YP_003110074.1 256372250 8323561 complement(1550436..1550789) 1 NC_013124.1 PFAM: carbon storage regulator; KEGG: lxx:Lxx06470 carbon storage regulator CsrA; carbon storage regulator CsrA 1550789 8323561 Afer_1478 Acidimicrobium ferrooxidans DSM 10331 carbon storage regulator CsrA YP_003110074.1 1550436 R 525909 CDS YP_003110075.1 256372251 8323562 complement(1550789..1551061) 1 NC_013124.1 hypothetical protein 1551061 8323562 Afer_1479 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110075.1 1550789 R 525909 CDS YP_003110076.1 256372252 8323563 complement(1551179..1552132) 1 NC_013124.1 hypothetical protein 1552132 8323563 Afer_1480 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110076.1 1551179 R 525909 CDS YP_003110077.1 256372253 8323564 complement(1552322..1553242) 1 NC_013124.1 hypothetical protein 1553242 8323564 Afer_1481 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110077.1 1552322 R 525909 CDS YP_003110078.1 256372254 8323565 complement(1553258..1554154) 1 NC_013124.1 hypothetical protein 1554154 8323565 Afer_1482 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110078.1 1553258 R 525909 CDS YP_003110079.1 256372255 8323566 complement(1554151..1554957) 1 NC_013124.1 hypothetical protein 1554957 8323566 Afer_1483 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110079.1 1554151 R 525909 CDS YP_003110080.1 256372256 8323567 complement(1554962..1555657) 1 NC_013124.1 KEGG: cms:CMS_pCSL0080 hypothetical protein; hypothetical protein 1555657 8323567 Afer_1484 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110080.1 1554962 R 525909 CDS YP_003110081.1 256372257 8323568 1555746..1556066 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1556066 8323568 Afer_1485 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003110081.1 1555746 D 525909 CDS YP_003110082.1 256372258 8323569 1556066..1556935 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_5060 integrase catalytic subunit; integrase catalytic subunit 1556935 8323569 Afer_1486 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003110082.1 1556066 D 525909 CDS YP_003110083.1 256372259 8323570 complement(1557180..1558706) 1 NC_013124.1 PFAM: transposase IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein; transposase IS4 family protein 1558706 8323570 Afer_1487 Acidimicrobium ferrooxidans DSM 10331 transposase IS4 family protein YP_003110083.1 1557180 R 525909 CDS YP_003110084.1 256372260 8323572 complement(1559146..1559853) 1 NC_013124.1 KEGG: mva:Mvan_3619 hypothetical protein; Zn-ribbon protein 1559853 8323572 Afer_1488 Acidimicrobium ferrooxidans DSM 10331 Zn-ribbon protein YP_003110084.1 1559146 R 525909 CDS YP_003110085.1 256372261 8323573 complement(1560010..1560477) 1 NC_013124.1 PFAM: RDD domain containing protein; KEGG: pca:Pcar_2416 hypothetical protein; RDD domain-containing protein 1560477 8323573 Afer_1489 Acidimicrobium ferrooxidans DSM 10331 RDD domain-containing protein YP_003110085.1 1560010 R 525909 CDS YP_003110086.1 256372262 8323574 complement(1560606..1561853) 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: fal:FRAAL2900 major facilitator superfamily permease; major facilitator superfamily protein 1561853 8323574 Afer_1490 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003110086.1 1560606 R 525909 CDS YP_003110087.1 256372263 8323575 1561927..1562436 1 NC_013124.1 PFAM: Inorganic pyrophosphatase; KEGG: msm:MSMEG_6114 inorganic pyrophosphatase; Inorganic diphosphatase 1562436 8323575 Afer_1491 Acidimicrobium ferrooxidans DSM 10331 Inorganic diphosphatase YP_003110087.1 1561927 D 525909 CDS YP_003110088.1 256372264 8323576 1562501..1562830 1 NC_013124.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: sat:SYN_02452 NifU-like domain-containing protein; nitrogen-fixing NifU domain-containing protein 1562830 8323576 Afer_1492 Acidimicrobium ferrooxidans DSM 10331 nitrogen-fixing NifU domain-containing protein YP_003110088.1 1562501 D 525909 CDS YP_003110089.1 256372265 8323577 1562832..1563566 1 NC_013124.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV_3829 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 1563566 8323577 Afer_1493 Acidimicrobium ferrooxidans DSM 10331 enoyl-CoA hydratase/isomerase YP_003110089.1 1562832 D 525909 CDS YP_003110090.1 256372266 8323578 1563557..1563802 1 NC_013124.1 KEGG: mva:Mvan_4307 hypothetical protein; hypothetical protein 1563802 8323578 Afer_1494 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110090.1 1563557 D 525909 CDS YP_003110091.1 256372267 8323579 complement(1563814..1564899) 1 NC_013124.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: kra:Krad_1362 Cys/Met metabolism pyridoxal- phosphate-dependent protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein 1564899 8323579 Afer_1495 Acidimicrobium ferrooxidans DSM 10331 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003110091.1 1563814 R 525909 CDS YP_003110092.1 256372268 8323580 complement(1564923..1565219) 1 NC_013124.1 KEGG: kra:Krad_1406 hypothetical protein; hypothetical protein 1565219 8323580 Afer_1496 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110092.1 1564923 R 525909 CDS YP_003110093.1 256372269 8323581 complement(1565244..1565585) 1 NC_013124.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: sen:SACE_6049 50S ribosomal protein L19; 50S ribosomal protein L19 1565585 8323581 Afer_1497 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L19 YP_003110093.1 1565244 R 525909 CDS YP_003110094.1 256372270 8323582 complement(1565582..1566349) 1 NC_013124.1 KEGG: gka:GK1201 tRNA (guanine-N(1)-)- methyltransferase (M1G-methyltransferase); TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 1566349 8323582 Afer_1498 Acidimicrobium ferrooxidans DSM 10331 tRNA (guanine-N1)-methyltransferase YP_003110094.1 1565582 R 525909 CDS YP_003110095.1 256372271 8323583 complement(1566358..1566828) 1 NC_013124.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; KEGG: sth:STH1469 16S rRNA processing protein; 16S rRNA processing protein RimM 1566828 8323583 Afer_1499 Acidimicrobium ferrooxidans DSM 10331 16S rRNA processing protein RimM YP_003110095.1 1566358 R 525909 CDS YP_003110096.1 256372272 8323584 complement(1566825..1567199) 1 NC_013124.1 KEGG: nca:Noca_3259 hypothetical protein; hypothetical protein 1567199 8323584 Afer_1500 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110096.1 1566825 R 525909 CDS YP_003110097.1 256372273 8323585 complement(1567199..1567450) 1 NC_013124.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: nth:Nther_1369 SSU ribosomal protein S16P; 30S ribosomal protein S16 1567450 8323585 Afer_1501 Acidimicrobium ferrooxidans DSM 10331 30S ribosomal protein S16 YP_003110097.1 1567199 R 525909 CDS YP_003110098.1 256372274 8323586 complement(1567527..1568858) 1 NC_013124.1 KEGG: sth:STH1465 signal recognition particle; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 1568858 8323586 Afer_1502 Acidimicrobium ferrooxidans DSM 10331 signal recognition particle protein YP_003110098.1 1567527 R 525909 CDS YP_003110099.1 256372275 8323587 complement(1568851..1569954) 1 NC_013124.1 KEGG: mav:MAV_3776 signal recognition particle- docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 1569954 8323587 Afer_1503 Acidimicrobium ferrooxidans DSM 10331 signal recognition particle-docking protein FtsY YP_003110099.1 1568851 R 525909 CDS YP_003110100.1 256372276 8323588 complement(1570332..1570574) 1 NC_013124.1 KEGG: hypothetical protein LOC100148517; hypothetical protein 1570574 8323588 Afer_1504 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110100.1 1570332 R 525909 CDS YP_003110101.1 256372277 8323589 1570853..1571410 1 NC_013124.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sco:SCO4866 ECF sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 1571410 8323589 Afer_1505 Acidimicrobium ferrooxidans DSM 10331 ECF subfamily RNA polymerase sigma-24 subunit YP_003110101.1 1570853 D 525909 CDS YP_003110102.1 256372278 8323590 1571407..1572258 1 NC_013124.1 KEGG: YALI0C15532p; hypothetical protein 1572258 8323590 Afer_1506 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110102.1 1571407 D 525909 CDS YP_003110103.1 256372279 8323591 complement(1572307..1575654) 1 NC_013124.1 PFAM: SMC domain protein; KEGG: sen:SACE_6071 chromosome segregation ATPase; SMC domain-containing protein 1575654 8323591 Afer_1507 Acidimicrobium ferrooxidans DSM 10331 SMC domain-containing protein YP_003110103.1 1572307 R 525909 CDS YP_003110104.1 256372280 8323592 complement(1575655..1576482) 1 NC_013124.1 KEGG: sen:SACE_6099 formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; zinc finger Fpg domain protein; formamidopyrimidine-DNA glycosylase 1576482 8323592 Afer_1508 Acidimicrobium ferrooxidans DSM 10331 formamidopyrimidine-DNA glycosylase YP_003110104.1 1575655 R 525909 CDS YP_003110105.1 256372281 8323593 complement(1576466..1577257) 1 NC_013124.1 KEGG: bba:Bd1941 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 1577257 8323593 Afer_1509 Acidimicrobium ferrooxidans DSM 10331 ribonuclease III YP_003110105.1 1576466 R 525909 CDS YP_003110106.1 256372282 8323594 complement(1577254..1577538) 1 NC_013124.1 PFAM: phosphopantetheine-binding; KEGG: csc:Csac_1606 acyl carrier protein; phosphopantetheine-binding protein 1577538 8323594 Afer_1510 Acidimicrobium ferrooxidans DSM 10331 phosphopantetheine-binding protein YP_003110106.1 1577254 R 525909 CDS YP_003110107.1 256372283 8323595 complement(1577531..1578511) 1 NC_013124.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: emi:Emin_0658 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX 1578511 8323595 Afer_1511 Acidimicrobium ferrooxidans DSM 10331 fatty acid/phospholipid synthesis protein PlsX YP_003110107.1 1577531 R 525909 CDS YP_003110108.1 256372284 8323596 complement(1578742..1579263) 1 NC_013124.1 PFAM: protein of unknown function DUF177; KEGG: nca:Noca_3282 hypothetical protein; hypothetical protein 1579263 8323596 Afer_1512 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110108.1 1578742 R 525909 CDS YP_003110109.1 256372285 8323597 complement(1579256..1579789) 1 NC_013124.1 KEGG: ace:Acel_1577 hypothetical protein; hypothetical protein 1579789 8323597 Afer_1513 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110109.1 1579256 R 525909 CDS YP_003110110.1 256372286 8323598 complement(1579786..1580271) 1 NC_013124.1 KEGG: gvi:glr0847 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 1580271 8323598 Afer_1514 Acidimicrobium ferrooxidans DSM 10331 pantetheine-phosphate adenylyltransferase YP_003110110.1 1579786 R 525909 CDS YP_003110111.1 256372287 8323599 complement(1580313..1580846) 1 NC_013124.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase KEGG: aeh:Mlg_2656 methyltransferase; methyltransferase 1580846 8323599 Afer_1515 Acidimicrobium ferrooxidans DSM 10331 methyltransferase YP_003110111.1 1580313 R 525909 CDS YP_003110112.1 256372288 8323600 complement(1580849..1583011) 1 NC_013124.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicases ; helicase domain protein; KEGG: rca:Rcas_0601 ATP-dependent DNA helicase RecG; DEAD/DEAH box helicase domain-containing protein 1583011 8323600 Afer_1516 Acidimicrobium ferrooxidans DSM 10331 DEAD/DEAH box helicase domain-containing protein YP_003110112.1 1580849 R 525909 CDS YP_003110113.1 256372289 8323601 complement(1583008..1584627) 1 NC_013124.1 PFAM: Dak phosphatase; KEGG: nca:Noca_3286 Dak phosphatase; Dak phosphatase 1584627 8323601 Afer_1517 Acidimicrobium ferrooxidans DSM 10331 Dak phosphatase YP_003110113.1 1583008 R 525909 CDS YP_003110114.1 256372290 8323602 1584701..1584889 1 NC_013124.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: fre:Franean1_1131 50S ribosomal protein L28; 50S ribosomal protein L28 1584889 8323602 Afer_1518 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L28 YP_003110114.1 1584701 D 525909 CDS YP_003110115.1 256372291 8323603 1584895..1585911 1 NC_013124.1 PFAM: ferrochelatase; KEGG: nfa:nfa34750 ferrochelatase; Ferrochelatase 1585911 8323603 Afer_1519 Acidimicrobium ferrooxidans DSM 10331 Ferrochelatase YP_003110115.1 1584895 D 525909 CDS YP_003110116.1 256372292 8323604 1586019..1587851 1 NC_013124.1 PFAM: extracellular solute-binding protein family 5; KEGG: saq:Sare_4778 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1587851 8323604 Afer_1520 Acidimicrobium ferrooxidans DSM 10331 family 5 extracellular solute-binding protein YP_003110116.1 1586019 D 525909 CDS YP_003110117.1 256372293 8323605 complement(1587848..1589260) 1 NC_013124.1 KEGG: mbo:Mb1152 glucose-6-phosphate 1- dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1589260 8323605 Afer_1521 Acidimicrobium ferrooxidans DSM 10331 glucose-6-phosphate 1-dehydrogenase YP_003110117.1 1587848 R 525909 CDS YP_003110118.1 256372294 8323606 complement(1589236..1590117) 1 NC_013124.1 PFAM: Aldose 1-epimerase; KEGG: saq:Sare_0514 aldose 1-epimerase; Aldose 1-epimerase 1590117 8323606 Afer_1522 Acidimicrobium ferrooxidans DSM 10331 Aldose 1-epimerase YP_003110118.1 1589236 R 525909 CDS YP_003110119.1 256372295 8323608 complement(1590852..1592462) 1 NC_013124.1 PFAM: Cytochrome b/b6 domain; KEGG: ace:Acel_1781 hypothetical protein; cytochrome b/b6 domain-containing protein 1592462 8323608 Afer_1523 Acidimicrobium ferrooxidans DSM 10331 cytochrome b/b6 domain-containing protein YP_003110119.1 1590852 R 525909 CDS YP_003110120.1 256372296 8323609 complement(1592459..1592635) 1 NC_013124.1 KEGG: ace:Acel_1781 hypothetical protein; hypothetical protein 1592635 8323609 Afer_1524 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110120.1 1592459 R 525909 CDS YP_003110121.1 256372297 8323610 complement(1592754..1596257) 1 NC_013124.1 KEGG: ajs:Ajs_2017 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: GGDEF domain containing protein; EAL domain protein; diguanylate cyclase/phosphodiesterase 1596257 8323610 Afer_1525 Acidimicrobium ferrooxidans DSM 10331 diguanylate cyclase/phosphodiesterase YP_003110121.1 1592754 R 525909 CDS YP_003110122.1 256372298 8323611 1596404..1597618 1 NC_013124.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0934 acyl-CoA dehydrogenase domain- containing protein; acyl-CoA dehydrogenase domain-containing protein 1597618 8323611 Afer_1526 Acidimicrobium ferrooxidans DSM 10331 acyl-CoA dehydrogenase domain-containing protein YP_003110122.1 1596404 D 525909 CDS YP_003110123.1 256372299 8323612 1597615..1598499 1 NC_013124.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: nca:Noca_4392 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 1598499 8323612 Afer_1527 Acidimicrobium ferrooxidans DSM 10331 3-hydroxybutyryl-CoA dehydrogenase YP_003110123.1 1597615 D 525909 CDS YP_003110124.1 256372300 8323613 1598539..1599945 1 NC_013124.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: fra:Francci3_3219 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 1599945 8323613 Afer_1528 Acidimicrobium ferrooxidans DSM 10331 glutamyl-tRNA synthetase YP_003110124.1 1598539 D 525909 CDS YP_003110125.1 256372301 8323615 complement(1600431..1601981) 1 NC_013124.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerization) domain; KEGG: rxy:Rxyl_3129 2-isopropylmalate synthase; 2-isopropylmalate synthase 1601981 8323615 Afer_1529 Acidimicrobium ferrooxidans DSM 10331 2-isopropylmalate synthase YP_003110125.1 1600431 R 525909 CDS YP_003110126.1 256372302 8323616 complement(1602182..1603765) 1 NC_013124.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1603765 8323616 Afer_1530 Acidimicrobium ferrooxidans DSM 10331 D-3-phosphoglycerate dehydrogenase YP_003110126.1 1602182 R 525909 CDS YP_003110127.1 256372303 8323617 complement(1603792..1604988) 1 NC_013124.1 PFAM: aminotransferase class I and II; KEGG: rsa:RSal33209_0984 aspartate aminotransferase; class I and II aminotransferase 1604988 8323617 Afer_1531 Acidimicrobium ferrooxidans DSM 10331 class I and II aminotransferase YP_003110127.1 1603792 R 525909 CDS YP_003110128.1 256372304 8323618 1605110..1606258 1 NC_013124.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 1606258 8323618 Afer_1532 Acidimicrobium ferrooxidans DSM 10331 phosphoserine aminotransferase YP_003110128.1 1605110 D 525909 CDS YP_003110129.1 256372305 8323619 complement(1606268..1606876) 1 NC_013124.1 KEGG: fre:Franean1_1114 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase, small subunit 1606876 8323619 Afer_1533 Acidimicrobium ferrooxidans DSM 10331 3-isopropylmalate dehydratase, small subunit YP_003110129.1 1606268 R 525909 CDS YP_003110130.1 256372306 8323620 complement(1606879..1608285) 1 NC_013124.1 KEGG: ace:Acel_1591 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase, large subunit 1608285 8323620 Afer_1534 Acidimicrobium ferrooxidans DSM 10331 3-isopropylmalate dehydratase, large subunit YP_003110130.1 1606879 R 525909 CDS YP_003110131.1 256372307 8323621 complement(1608313..1608795) 1 NC_013124.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: fra:Francci3_3904 GreA/GreB family elongation factor; GreA/GreB family elongation factor 1608795 8323621 Afer_1535 Acidimicrobium ferrooxidans DSM 10331 GreA/GreB family elongation factor YP_003110131.1 1608313 R 525909 CDS YP_003110132.1 256372308 8323622 1608970..1609998 1 NC_013124.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: nca:Noca_3368 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1609998 8323622 Afer_1536 Acidimicrobium ferrooxidans DSM 10331 3-isopropylmalate dehydrogenase YP_003110132.1 1608970 D 525909 CDS YP_003110133.1 256372309 8323623 1609985..1610911 1 NC_013124.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: fre:Franean1_1099 branched-chain amino acid aminotransferase; branched-chain amino acid aminotransferase 1610911 8323623 Afer_1537 Acidimicrobium ferrooxidans DSM 10331 branched-chain amino acid aminotransferase YP_003110133.1 1609985 D 525909 CDS YP_003110134.1 256372310 8323624 1610918..1612510 1 NC_013124.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerization) domain; KEGG: tfu:Tfu_0617 alpha- isopropylmalate/homocitrate synthase family transferase; alpha-isopropylmalate/homocitrate synthase family transferase 1612510 8323624 Afer_1538 Acidimicrobium ferrooxidans DSM 10331 alpha-isopropylmalate/homocitrate synthase family transferase YP_003110134.1 1610918 D 525909 CDS YP_003110135.1 256372311 8323625 1612524..1612985 1 NC_013124.1 hypothetical protein 1612985 8323625 Afer_1539 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110135.1 1612524 D 525909 CDS YP_003110136.1 256372312 8323626 complement(1612982..1613539) 1 NC_013124.1 hypothetical protein 1613539 8323626 Afer_1540 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110136.1 1612982 R 525909 CDS YP_003110137.1 256372313 8323632 complement(1620173..1621471) 1 NC_013124.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pac:PPA0152 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1621471 8323632 Afer_1542 Acidimicrobium ferrooxidans DSM 10331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003110137.1 1620173 R 525909 CDS YP_003110138.1 256372314 8323633 complement(1621508..1622149) 1 NC_013124.1 KEGG: scl:sce8592 hypothetical protein; hypothetical protein 1622149 8323633 Afer_1543 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110138.1 1621508 R 525909 CDS YP_003110139.1 256372315 8323634 complement(1622133..1623368) 1 NC_013124.1 KEGG: cmi:CMM_1462 hypothetical protein; hypothetical protein 1623368 8323634 Afer_1544 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110139.1 1622133 R 525909 CDS YP_003110140.1 256372316 8323635 complement(1623365..1624387) 1 NC_013124.1 KEGG: ava:Ava_0133 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 1624387 8323635 Afer_1545 Acidimicrobium ferrooxidans DSM 10331 ketol-acid reductoisomerase YP_003110140.1 1623365 R 525909 CDS YP_003110141.1 256372317 8323636 complement(1624391..1624963) 1 NC_013124.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: ace:Acel_0707 acetolactate synthase 3 regulatory subunit; acetolactate synthase, small subunit 1624963 8323636 Afer_1546 Acidimicrobium ferrooxidans DSM 10331 acetolactate synthase, small subunit YP_003110141.1 1624391 R 525909 CDS YP_003110142.1 256372318 8323637 complement(1624960..1626669) 1 NC_013124.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: kra:Krad_1335 acetolactate synthase 1 catalytic subunit; acetolactate synthase, large subunit, biosynthetic type 1626669 8323637 Afer_1547 Acidimicrobium ferrooxidans DSM 10331 acetolactate synthase, large subunit, biosynthetic type YP_003110142.1 1624960 R 525909 CDS YP_003110143.1 256372319 8323638 complement(1626838..1628541) 1 NC_013124.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1628541 8323638 Afer_1548 Acidimicrobium ferrooxidans DSM 10331 dihydroxy-acid dehydratase YP_003110143.1 1626838 R 525909 CDS YP_003110144.1 256372320 8323639 complement(1628621..1630072) 1 NC_013124.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB/Yqey domain protein; GatB central domain protein; KEGG: pth:PTH_2521 aspartyl/glutamyl-tRNA amidotransferase subunit B; glutamyl-tRNA(Gln) amidotransferase subunit B 1630072 8323639 Afer_1549 Acidimicrobium ferrooxidans DSM 10331 glutamyl-tRNA(Gln) amidotransferase subunit B YP_003110144.1 1628621 R 525909 CDS YP_003110145.1 256372321 8323640 complement(1630069..1631508) 1 NC_013124.1 KEGG: fre:Franean1_1085 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 1631508 8323640 Afer_1550 Acidimicrobium ferrooxidans DSM 10331 glutamyl-tRNA(Gln) amidotransferase subunit A YP_003110145.1 1630069 R 525909 CDS YP_003110146.1 256372322 8323641 complement(1631505..1631807) 1 NC_013124.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; KEGG: dps:DP0644 Glu-tRNA(Gln) amidotransferase, subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C 1631807 8323641 Afer_1551 Acidimicrobium ferrooxidans DSM 10331 glutamyl-tRNA(Gln) amidotransferase subunit C YP_003110146.1 1631505 R 525909 CDS YP_003110147.1 256372323 8323642 complement(1631840..1632277) 1 NC_013124.1 KEGG: prw:PsycPRwf_1743 hypothetical protein; hypothetical protein 1632277 8323642 Afer_1552 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110147.1 1631840 R 525909 CDS YP_003110148.1 256372324 8323643 complement(1632312..1634204) 1 NC_013124.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: ace:Acel_0986 serine/threonine protein kinase; serine/threonine protein kinase with PASTA sensor(s) 1634204 8323643 Afer_1553 Acidimicrobium ferrooxidans DSM 10331 serine/threonine protein kinase with PASTA sensor(s) YP_003110148.1 1632312 R 525909 CDS YP_003110149.1 256372325 8323644 complement(1634259..1636253) 1 NC_013124.1 KEGG: cau:Caur_0241 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; helix-hairpin-helix motif; zinc-finger NAD- dependent DNA ligase C4-type; NAD-dependent DNA ligase OB- fold; SMART: NAD-dependent DNA ligase ; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase 1636253 8323644 Afer_1554 Acidimicrobium ferrooxidans DSM 10331 NAD-dependent DNA ligase YP_003110149.1 1634259 R 525909 CDS YP_003110150.1 256372326 8323645 complement(1636246..1637271) 1 NC_013124.1 PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; ExsB family protein; KEGG: scl:sce7297 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase 1637271 8323645 Afer_1555 Acidimicrobium ferrooxidans DSM 10331 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase YP_003110150.1 1636246 R 525909 CDS YP_003110151.1 256372327 8323646 complement(1637298..1638056) 1 NC_013124.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ade:Adeh_3985 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1638056 8323646 Afer_1556 Acidimicrobium ferrooxidans DSM 10331 glycerophosphoryl diester phosphodiesterase YP_003110151.1 1637298 R 525909 CDS YP_003110152.1 256372328 8323647 1638094..1638687 1 NC_013124.1 hypothetical protein 1638687 8323647 Afer_1557 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110152.1 1638094 D 525909 CDS YP_003110153.1 256372329 8323648 1638749..1639558 1 NC_013124.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rxy:Rxyl_1139 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 1639558 8323648 Afer_1558 Acidimicrobium ferrooxidans DSM 10331 prolipoprotein diacylglyceryl transferase YP_003110153.1 1638749 D 525909 CDS YP_003110154.1 256372330 8323649 1639555..1640886 1 NC_013124.1 TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: ace:Acel_1692 nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase 1640886 8323649 Afer_1559 Acidimicrobium ferrooxidans DSM 10331 nicotinate phosphoribosyltransferase YP_003110154.1 1639555 D 525909 CDS YP_003110155.1 256372331 8323650 1640896..1642134 1 NC_013124.1 PFAM: beta-lactamase; KEGG: sen:SACE_2212 beta-lactamase; beta-lactamase 1642134 8323650 Afer_1560 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase YP_003110155.1 1640896 D 525909 CDS YP_003110156.1 256372332 8323651 complement(1642187..1642567) 1 NC_013124.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: tfu:Tfu_0172 thioredoxin; thioredoxin 1642567 8323651 Afer_1561 Acidimicrobium ferrooxidans DSM 10331 thioredoxin YP_003110156.1 1642187 R 525909 CDS YP_003110157.1 256372333 8323653 complement(1642754..1643212) 1 NC_013124.1 PFAM: protein of unknown function DUF501; KEGG: rxy:Rxyl_0915 hypothetical protein; hypothetical protein 1643212 8323653 Afer_1562 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110157.1 1642754 R 525909 CDS YP_003110158.1 256372334 8323654 complement(1643202..1643906) 1 NC_013124.1 PFAM: carbon monoxide dehydrogenase subunit G; Activator of Hsp90 ATPase 1 family protein; KEGG: fre:Franean1_3210 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G 1643906 8323654 Afer_1563 Acidimicrobium ferrooxidans DSM 10331 carbon monoxide dehydrogenase subunit G YP_003110158.1 1643202 R 525909 CDS YP_003110159.1 256372335 8323655 complement(1643909..1644502) 1 NC_013124.1 KEGG: rxy:Rxyl_0118 4-diphosphocytidyl-2C-methyl-D- erythritol synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1644502 8323655 Afer_1564 Acidimicrobium ferrooxidans DSM 10331 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003110159.1 1643909 R 525909 CDS YP_003110160.1 256372336 8323656 complement(1644499..1645707) 1 NC_013124.1 PFAM: protein of unknown function DUF182; KEGG: sgr:SGR_1805 xanthine dehydrogenase; hypothetical protein 1645707 8323656 Afer_1565 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110160.1 1644499 R 525909 CDS YP_003110161.1 256372337 8323657 complement(1645700..1646794) 1 NC_013124.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor A; KEGG: rha:RHA1_ro04978 hypothetical protein; VWA containing CoxE family protein 1646794 8323657 Afer_1566 Acidimicrobium ferrooxidans DSM 10331 VWA containing CoxE family protein YP_003110161.1 1645700 R 525909 CDS YP_003110162.1 256372338 8323658 complement(1646778..1647746) 1 NC_013124.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rha:RHA1_ro04979 MoxR family ATPase; ATPase 1647746 8323658 Afer_1567 Acidimicrobium ferrooxidans DSM 10331 ATPase YP_003110162.1 1646778 R 525909 CDS YP_003110163.1 256372339 8323659 complement(1647733..1648542) 1 NC_013124.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sen:SACE_1160 carbon monoxide dehydrogenase, medium chain; FAD-binding molybdopterin dehydrogenase 1648542 8323659 Afer_1568 Acidimicrobium ferrooxidans DSM 10331 FAD-binding molybdopterin dehydrogenase YP_003110163.1 1647733 R 525909 CDS YP_003110164.1 256372340 8323660 complement(1648555..1650942) 1 NC_013124.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rxy:Rxyl_0112 xanthine dehydrogenase, molybdenum binding subunit apoprotein; carbon-monoxide dehydrogenase (acceptor) 1650942 8323660 Afer_1569 Acidimicrobium ferrooxidans DSM 10331 carbon-monoxide dehydrogenase (acceptor) YP_003110164.1 1648555 R 525909 CDS YP_003110165.1 256372341 8323661 complement(1650939..1651412) 1 NC_013124.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sen:SACE_1161 carbon monoxide dehydrogenase small chain; (2Fe-2S)-binding domain-containing protein 1651412 8323661 Afer_1570 Acidimicrobium ferrooxidans DSM 10331 (2Fe-2S)-binding domain-containing protein YP_003110165.1 1650939 R 525909 CDS YP_003110166.1 256372342 8323662 1651662..1652141 1 NC_013124.1 PFAM: protein of unknown function DUF107; KEGG: cpc:Cpar_0823 protein of unknown function DUF107; hypothetical protein 1652141 8323662 Afer_1571 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110166.1 1651662 D 525909 CDS YP_003110167.1 256372343 8323663 1652155..1653078 1 NC_013124.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: tpe:Tpen_0832 band 7 protein; hypothetical protein 1653078 8323663 Afer_1572 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110167.1 1652155 D 525909 CDS YP_003110168.1 256372344 8323664 complement(1653735..1655069) 1 NC_013124.1 PFAM: inner-membrane translocator; KEGG: saq:Sare_4238 monosaccharide-transporting ATPase; inner-membrane translocator 1655069 8323664 Afer_1573 Acidimicrobium ferrooxidans DSM 10331 inner-membrane translocator YP_003110168.1 1653735 R 525909 CDS YP_003110169.1 256372345 8323665 complement(1655069..1655854) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_5292 ABC transporter-related protein; ABC transporter-like protein 1655854 8323665 Afer_1574 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003110169.1 1655069 R 525909 CDS YP_003110170.1 256372346 8323666 complement(1655929..1657143) 1 NC_013124.1 KEGG: ace:Acel_1132 solute-binding protein; solute-binding protein 1657143 8323666 Afer_1575 Acidimicrobium ferrooxidans DSM 10331 solute-binding protein YP_003110170.1 1655929 R 525909 CDS YP_003110171.1 256372347 8323667 complement(1657259..1657951) 1 NC_013124.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: hau:Haur_2262 two component transcriptional regulator; winged helix family two component transcriptional regulator 1657951 8323667 Afer_1576 Acidimicrobium ferrooxidans DSM 10331 winged helix family two component transcriptional regulator YP_003110171.1 1657259 R 525909 CDS YP_003110172.1 256372348 8323668 complement(1657948..1660200) 1 NC_013124.1 PFAM: ABC transporter related; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; AAA ATPase; KEGG: sgr:SGR_1497 ABC transporter ATP- binding protein; histidine kinase 1660200 8323668 Afer_1577 Acidimicrobium ferrooxidans DSM 10331 histidine kinase YP_003110172.1 1657948 R 525909 CDS YP_003110173.1 256372349 8323669 1660234..1662495 1 NC_013124.1 KEGG: ade:Adeh_2512 UvrD/REP helicase; hypothetical protein 1662495 8323669 Afer_1578 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110173.1 1660234 D 525909 CDS YP_003110174.1 256372350 8323670 1662495..1665464 1 NC_013124.1 PFAM: UvrD/REP helicase; KEGG: syf:Synpcc7942_1157 hypothetical protein; UvrD/REP helicase 1665464 8323670 Afer_1579 Acidimicrobium ferrooxidans DSM 10331 UvrD/REP helicase YP_003110174.1 1662495 D 525909 CDS YP_003110175.1 256372351 8323671 1665474..1666040 1 NC_013124.1 hypothetical protein 1666040 8323671 Afer_1580 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110175.1 1665474 D 525909 CDS YP_003110176.1 256372352 8323672 1666076..1666636 1 NC_013124.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: sma:SAV_6582 RNA polymerase sigma factor SigK; ECF subfamily RNA polymerase sigma-24 subunit 1666636 8323672 Afer_1581 Acidimicrobium ferrooxidans DSM 10331 ECF subfamily RNA polymerase sigma-24 subunit YP_003110176.1 1666076 D 525909 CDS YP_003110177.1 256372353 8323673 1666636..1667370 1 NC_013124.1 KEGG: fal:FRAAL3631 hypothetical protein; hypothetical protein 1667370 8323673 Afer_1582 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110177.1 1666636 D 525909 CDS YP_003110178.1 256372354 8323674 complement(1667476..1667937) 1 NC_013124.1 hypothetical protein 1667937 8323674 Afer_1583 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110178.1 1667476 R 525909 CDS YP_003110179.1 256372355 8323675 complement(1668068..1668790) 1 NC_013124.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ttj:TTHB141 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1668790 8323675 Afer_1584 Acidimicrobium ferrooxidans DSM 10331 glycerophosphoryl diester phosphodiesterase YP_003110179.1 1668068 R 525909 CDS YP_003110180.1 256372356 8323676 complement(1669078..1671366) 1 NC_013124.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sen:SACE_5140 carbon monoxide dehydrogenase large chain; carbon-monoxide dehydrogenase (acceptor) 1671366 8323676 Afer_1585 Acidimicrobium ferrooxidans DSM 10331 carbon-monoxide dehydrogenase (acceptor) YP_003110180.1 1669078 R 525909 CDS YP_003110181.1 256372357 8323677 complement(1671575..1672048) 1 NC_013124.1 KEGG: mva:Mvan_5241 FHA domain-containing protein; hypothetical protein 1672048 8323677 Afer_1586 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110181.1 1671575 R 525909 CDS YP_003110182.1 256372358 8323678 complement(1672085..1672849) 1 NC_013124.1 PFAM: protein of unknown function DUF124; KEGG: azc:AZC_0415 hypothetical protein; hypothetical protein 1672849 8323678 Afer_1587 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110182.1 1672085 R 525909 CDS YP_003110183.1 256372359 8323679 complement(1672925..1673281) 1 NC_013124.1 hypothetical protein 1673281 8323679 Afer_1588 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110183.1 1672925 R 525909 CDS YP_003110184.1 256372360 8323680 complement(1673278..1674567) 1 NC_013124.1 KEGG: dar:Daro_2364 phosphopyruvate hydratase; TIGRFAM: enolase; PFAM: enolase; enolase 1674567 8323680 Afer_1589 Acidimicrobium ferrooxidans DSM 10331 enolase YP_003110184.1 1673278 R 525909 CDS YP_003110185.1 256372361 8323681 complement(1674596..1675888) 1 NC_013124.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: gvi:gll2594 tetrapyrrole methylase family protein / MazG family protein; MazG nucleotide pyrophosphohydrolase 1675888 8323681 Afer_1590 Acidimicrobium ferrooxidans DSM 10331 MazG nucleotide pyrophosphohydrolase YP_003110185.1 1674596 R 525909 CDS YP_003110186.1 256372362 8323682 complement(1676008..1676511) 1 NC_013124.1 KEGG: predicted protein; hypothetical protein 1676511 8323682 Afer_1591 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110186.1 1676008 R 525909 CDS YP_003110187.1 256372363 8323683 complement(1676731..1676859) 1 NC_013124.1 hypothetical protein 1676859 8323683 Afer_1592 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110187.1 1676731 R 525909 CDS YP_003110188.1 256372364 8323684 complement(1677075..1678088) 1 NC_013124.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dra:DR_1063 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 1678088 8323684 Afer_1593 Acidimicrobium ferrooxidans DSM 10331 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003110188.1 1677075 R 525909 CDS YP_003110189.1 256372365 8323685 complement(1678116..1681511) 1 NC_013124.1 KEGG: fal:FRAAL6237 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; TRCF domain protein; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein; transcription-repair coupling factor 1681511 8323685 Afer_1594 Acidimicrobium ferrooxidans DSM 10331 transcription-repair coupling factor YP_003110189.1 1678116 R 525909 CDS YP_003110190.1 256372366 8323686 complement(1681489..1682067) 1 NC_013124.1 KEGG: mmi:MMAR_4473 peptidyl-tRNA hydrolase Pth; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1682067 8323686 Afer_1595 Acidimicrobium ferrooxidans DSM 10331 peptidyl-tRNA hydrolase YP_003110190.1 1681489 R 525909 CDS YP_003110191.1 256372367 8323687 complement(1682096..1682614) 1 NC_013124.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: tbd:Tbd_0388 50S ribosomal protein L25/general stress protein Ctc; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 1682614 8323687 Afer_1596 Acidimicrobium ferrooxidans DSM 10331 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 YP_003110191.1 1682096 R 525909 CDS YP_003110192.1 256372368 8323688 complement(1682698..1683669) 1 NC_013124.1 KEGG: ace:Acel_1946 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 1683669 8323688 Afer_1597 Acidimicrobium ferrooxidans DSM 10331 ribose-phosphate pyrophosphokinase YP_003110192.1 1682698 R 525909 CDS YP_003110193.1 256372369 8323689 complement(1684616..1685230) 1 NC_013124.1 PFAM: metallophosphoesterase; KEGG: mpa:MAP0859c hypothetical protein; metallophosphoesterase 1685230 8323689 Afer_1598 Acidimicrobium ferrooxidans DSM 10331 metallophosphoesterase YP_003110193.1 1684616 R 525909 CDS YP_003110194.1 256372370 8323690 complement(1685728..1686822) 1 NC_013124.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: tfu:Tfu_0414 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N- acetyltransferase; Nucleotidyl transferase 1686822 8323690 Afer_1599 Acidimicrobium ferrooxidans DSM 10331 Nucleotidyl transferase YP_003110194.1 1685728 R 525909 CDS YP_003110195.1 256372371 8323691 complement(1686846..1688405) 1 NC_013124.1 KEGG: glycoside hydrolase family 5 protein; hypothetical protein 1688405 8323691 Afer_1600 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110195.1 1686846 R 525909 CDS YP_003110196.1 256372372 8323692 1688498..1690018 1 NC_013124.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 1690018 8323692 Afer_1601 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110196.1 1688498 D 525909 CDS YP_003110197.1 256372373 8323693 complement(1690055..1692121) 1 NC_013124.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: hypothetical protein; K01278 dipeptidyl- peptidase 4; peptidase S9 prolyl oligopeptidase active site domain-containing protein 1692121 8323693 Afer_1602 Acidimicrobium ferrooxidans DSM 10331 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003110197.1 1690055 R 525909 CDS YP_003110198.1 256372374 8323694 complement(1692457..1692975) 1 NC_013124.1 PFAM: MaoC domain protein dehydratase; KEGG: saq:Sare_0676 dehydratase; MaoC domain-containing protein dehydratase 1692975 8323694 Afer_1603 Acidimicrobium ferrooxidans DSM 10331 MaoC domain-containing protein dehydratase YP_003110198.1 1692457 R 525909 CDS YP_003110199.1 256372375 8323695 complement(1692980..1693465) 1 NC_013124.1 KEGG: ace:Acel_1395 hypothetical protein; hypothetical protein 1693465 8323695 Afer_1604 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110199.1 1692980 R 525909 CDS YP_003110200.1 256372376 8323696 complement(1693513..1694274) 1 NC_013124.1 PFAM: Abortive infection protein; KEGG: mtu:Rv0658c integral membrane protein; abortive infection protein 1694274 8323696 Afer_1605 Acidimicrobium ferrooxidans DSM 10331 abortive infection protein YP_003110200.1 1693513 R 525909 CDS YP_003110201.1 256372377 8323697 1694496..1696478 1 NC_013124.1 KEGG: dde:Dde_1513 FtsH peptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 1696478 8323697 Afer_1606 Acidimicrobium ferrooxidans DSM 10331 ATP-dependent metalloprotease FtsH YP_003110201.1 1694496 D 525909 CDS YP_003110202.1 256372378 8323698 1696486..1697349 1 NC_013124.1 PFAM: YdjC family protein; KEGG: ttj:TTHB029 hypothetical protein; YdjC family protein 1697349 8323698 Afer_1607 Acidimicrobium ferrooxidans DSM 10331 YdjC family protein YP_003110202.1 1696486 D 525909 CDS YP_003110203.1 256372379 8323699 complement(1697273..1697668) 1 NC_013124.1 KEGG: csa:Csal_1939 sterol-binding; hypothetical protein 1697668 8323699 Afer_1608 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110203.1 1697273 R 525909 CDS YP_003110204.1 256372380 8323700 complement(1697679..1698572) 1 NC_013124.1 PFAM: LmbE family protein; KEGG: sen:SACE_0909 N- acetylglucosaminylphosphatidylinositol deacetylase; LmbE family protein 1698572 8323700 Afer_1609 Acidimicrobium ferrooxidans DSM 10331 LmbE family protein YP_003110204.1 1697679 R 525909 CDS YP_003110205.1 256372381 8323701 complement(1698627..1699658) 1 NC_013124.1 KEGG: GK23692; hypothetical protein 1699658 8323701 Afer_1610 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110205.1 1698627 R 525909 CDS YP_003110206.1 256372382 8323702 complement(1699682..1702843) 1 NC_013124.1 KEGG: fal:FRAAL2180 error-prone DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1702843 8323702 Afer_1611 Acidimicrobium ferrooxidans DSM 10331 DNA polymerase III subunit alpha YP_003110206.1 1699682 R 525909 CDS YP_003110207.1 256372383 8323703 complement(1702816..1704369) 1 NC_013124.1 KEGG: fal:FRAAL2179 DNA-directed DNA polymerase; DNA-directed DNA polymerase 1704369 8323703 Afer_1612 Acidimicrobium ferrooxidans DSM 10331 DNA-directed DNA polymerase YP_003110207.1 1702816 R 525909 CDS YP_003110208.1 256372384 8323704 complement(1704366..1704953) 1 NC_013124.1 KEGG: cur:cur_0403 hypothetical protein; hypothetical protein 1704953 8323704 Afer_1613 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110208.1 1704366 R 525909 CDS YP_003110209.1 256372385 8323705 complement(1704983..1705735) 1 NC_013124.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dsy:DSY4747 hypothetical protein; GntR family transcriptional regulator 1705735 8323705 Afer_1614 Acidimicrobium ferrooxidans DSM 10331 GntR family transcriptional regulator YP_003110209.1 1704983 R 525909 CDS YP_003110210.1 256372386 8323706 complement(1706030..1707220) 1 NC_013124.1 PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein; KEGG: mca:MCA2378 ribonuclease D; 3'-5' exonuclease 1707220 8323706 Afer_1615 Acidimicrobium ferrooxidans DSM 10331 3'-5' exonuclease YP_003110210.1 1706030 R 525909 CDS YP_003110211.1 256372387 8323707 1707874..1708281 1 NC_013124.1 PFAM: histidine triad (HIT) protein; KEGG: scl:sce6886 histidine triad, HIT-like protein; histidine triad (HIT) protein 1708281 8323707 Afer_1616 Acidimicrobium ferrooxidans DSM 10331 histidine triad (HIT) protein YP_003110211.1 1707874 D 525909 CDS YP_003110212.1 256372388 8323711 complement(1709907..1710299) 1 NC_013124.1 PFAM: PilT protein domain protein; KEGG: mva:Mvan_1717 PilT domain-containing protein; PilT protein domain-containing protein 1710299 8323711 Afer_1620 Acidimicrobium ferrooxidans DSM 10331 PilT protein domain-containing protein YP_003110212.1 1709907 R 525909 CDS YP_003110213.1 256372389 8323712 complement(1710299..1710574) 1 NC_013124.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: mbb:BCG_3454c hypothetical protein; prevent-host-death family protein 1710574 8323712 Afer_1621 Acidimicrobium ferrooxidans DSM 10331 prevent-host-death family protein YP_003110213.1 1710299 R 525909 CDS YP_003110214.1 256372390 8323715 complement(1711461..1712696) 1 NC_013124.1 KEGG: rrs:RoseRS_2069 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA- binding S4 domain protein; tyrosyl-tRNA synthetase 1712696 8323715 Afer_1624 Acidimicrobium ferrooxidans DSM 10331 tyrosyl-tRNA synthetase YP_003110214.1 1711461 R 525909 CDS YP_003110215.1 256372391 8323716 complement(1712709..1714349) 1 NC_013124.1 KEGG: gka:GK2875 2-succinyl-6-hydroxy-2,4- cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; 2-oxoglutarate decarboxylase 1714349 8323716 Afer_1625 Acidimicrobium ferrooxidans DSM 10331 2-oxoglutarate decarboxylase YP_003110215.1 1712709 R 525909 CDS YP_003110216.1 256372392 8323717 1714385..1715221 1 NC_013124.1 KEGG: cch:Cag_1720 thioesterase, menaquinone synthesis protein; thioesterase, menaquinone synthesis protein 1715221 8323717 Afer_1626 Acidimicrobium ferrooxidans DSM 10331 thioesterase, menaquinone synthesis protein YP_003110216.1 1714385 D 525909 CDS YP_003110217.1 256372393 8323718 complement(1715218..1716105) 1 NC_013124.1 TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: tfu:Tfu_0788 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase 1716105 8323718 Afer_1627 Acidimicrobium ferrooxidans DSM 10331 1,4-dihydroxy-2-naphthoateoctaprenyltransferase YP_003110217.1 1715218 R 525909 CDS YP_003110218.1 256372394 8323719 1716164..1717351 1 NC_013124.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mkm:Mkms_0740 O-succinylbenzoic acid--CoA ligase; AMP-dependent synthetase and ligase 1717351 8323719 Afer_1628 Acidimicrobium ferrooxidans DSM 10331 AMP-dependent synthetase and ligase YP_003110218.1 1716164 D 525909 CDS YP_003110219.1 256372395 8323720 complement(1717348..1718805) 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: rso:RS02383 amino acid transporter transmembrane protein; amino acid permease-associated protein 1718805 8323720 Afer_1629 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003110219.1 1717348 R 525909 CDS YP_003110220.1 256372396 8323721 complement(1718934..1719680) 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cur:cur_1752 dehydrogenase related to short- chain alcohol dehydrogenases; short-chain dehydrogenase/reductase SDR 1719680 8323721 Afer_1630 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003110220.1 1718934 R 525909 CDS YP_003110221.1 256372397 8323722 1719747..1721699 1 NC_013124.1 PFAM: protein of unknown function DUF255; KEGG: nfa:nfa48210 hypothetical protein; hypothetical protein 1721699 8323722 Afer_1631 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110221.1 1719747 D 525909 CDS YP_003110222.1 256372398 8323723 1721971..1722585 1 NC_013124.1 hypothetical protein 1722585 8323723 Afer_1632 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110222.1 1721971 D 525909 CDS YP_003110223.1 256372399 8323724 1722615..1723199 1 NC_013124.1 TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll3817 hypothetical protein; peroxidase-like protein 1723199 8323724 Afer_1633 Acidimicrobium ferrooxidans DSM 10331 peroxidase-like protein YP_003110223.1 1722615 D 525909 CDS YP_003110224.1 256372400 8323726 1724970..1725524 1 NC_013124.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: fra:Francci3_1856 excisionase/Xis, DNA- binding; excisionase family DNA binding domain-containing protein 1725524 8323726 Afer_1635 Acidimicrobium ferrooxidans DSM 10331 excisionase family DNA binding domain-containing protein YP_003110224.1 1724970 D 525909 CDS YP_003110225.1 256372401 8323727 1725529..1726089 1 NC_013124.1 KEGG: sbl:Sbal_4436 hypothetical protein; hypothetical protein 1726089 8323727 Afer_1636 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110225.1 1725529 D 525909 CDS YP_003110226.1 256372402 8323728 complement(1726886..1727332) 1 NC_013124.1 PFAM: protein of unknown function DUF1707; KEGG: sco:SCO2893 hypothetical protein; hypothetical protein 1727332 8323728 Afer_1637 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110226.1 1726886 R 525909 CDS YP_003110227.1 256372403 8323729 1727456..1731025 1 NC_013124.1 KEGG: ace:Acel_1054 DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1731025 8323729 Afer_1638 Acidimicrobium ferrooxidans DSM 10331 DNA polymerase III subunit alpha YP_003110227.1 1727456 D 525909 CDS YP_003110228.1 256372404 8323730 1731015..1731719 1 NC_013124.1 PFAM: peptidase S51 dipeptidase E; KEGG: smt:Smal_0740 peptidase S51 dipeptidase E; peptidase S51 dipeptidase E 1731719 8323730 Afer_1639 Acidimicrobium ferrooxidans DSM 10331 peptidase S51 dipeptidase E YP_003110228.1 1731015 D 525909 CDS YP_003110229.1 256372405 8323731 complement(1731735..1733147) 1 NC_013124.1 TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: bca:BCE_2691 glutamate decarboxylase; glutamate decarboxylase 1733147 8323731 Afer_1640 Acidimicrobium ferrooxidans DSM 10331 glutamate decarboxylase YP_003110229.1 1731735 R 525909 CDS YP_003110230.1 256372406 8323732 complement(1733518..1735488) 1 NC_013124.1 PFAM: AMP-dependent synthetase and ligase; KEGG: tac:Ta0769 acetyl-coenzyme A synthetase; AMP-dependent synthetase and ligase 1735488 8323732 Afer_1641 Acidimicrobium ferrooxidans DSM 10331 AMP-dependent synthetase and ligase YP_003110230.1 1733518 R 525909 CDS YP_003110231.1 256372407 8323733 complement(1735524..1736732) 1 NC_013124.1 KEGG: rha:RHA1_ro04406 amidase; hypothetical protein 1736732 8323733 Afer_1642 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110231.1 1735524 R 525909 CDS YP_003110232.1 256372408 8323734 complement(1736742..1737422) 1 NC_013124.1 hypothetical protein 1737422 8323734 Afer_1643 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110232.1 1736742 R 525909 CDS YP_003110233.1 256372409 8323735 1737516..1737983 1 NC_013124.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I; KEGG: hpa:HPAG1_1339 7-cyano-7-deazaguanine reductase; 7-cyano-7-deazaguanine reductase 1737983 8323735 Afer_1644 Acidimicrobium ferrooxidans DSM 10331 7-cyano-7-deazaguanine reductase YP_003110233.1 1737516 D 525909 CDS YP_003110234.1 256372410 8323736 1737980..1738552 1 NC_013124.1 PFAM: protein of unknown function DUF165; KEGG: kra:Krad_4383 hypothetical protein; hypothetical protein 1738552 8323736 Afer_1645 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110234.1 1737980 D 525909 CDS YP_003110235.1 256372411 8323737 1738549..1739496 1 NC_013124.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gtn:GTNG_1176 transporter, EamA family; hypothetical protein 1739496 8323737 Afer_1646 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110235.1 1738549 D 525909 CDS YP_003110236.1 256372412 8323738 complement(1740085..1740447) 1 NC_013124.1 PFAM: Resolvase domain; KEGG: ppd:Ppro_1125 resolvase domain-containing protein; resolvase domain-containing protein 1740447 8323738 Afer_1647 Acidimicrobium ferrooxidans DSM 10331 resolvase domain-containing protein YP_003110236.1 1740085 R 525909 CDS YP_003110237.1 256372413 8323739 complement(1740464..1740904) 1 NC_013124.1 TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: rca:Rcas_2210 death-on-curing family protein; death-on-curing family protein 1740904 8323739 Afer_1648 Acidimicrobium ferrooxidans DSM 10331 death-on-curing family protein YP_003110237.1 1740464 R 525909 CDS YP_003110238.1 256372414 8323740 complement(1741185..1741583) 1 NC_013124.1 KEGG: rci:RCIX1146 hypothetical protein; hypothetical protein 1741583 8323740 Afer_1649 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110238.1 1741185 R 525909 CDS YP_003110239.1 256372415 8323741 complement(1741693..1742190) 1 NC_013124.1 hypothetical protein 1742190 8323741 Afer_1650 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110239.1 1741693 R 525909 CDS YP_003110240.1 256372416 8323742 complement(1742252..1742500) 1 NC_013124.1 hypothetical protein 1742500 8323742 Afer_1651 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110240.1 1742252 R 525909 CDS YP_003110241.1 256372417 8323743 complement(1742666..1742980) 1 NC_013124.1 PFAM: CopG domain protein DNA-binding domain protein; CopG domain-containing protein DNA-binding domain-containing protein 1742980 8323743 Afer_1652 Acidimicrobium ferrooxidans DSM 10331 CopG domain-containing protein DNA-binding domain-containing protein YP_003110241.1 1742666 R 525909 CDS YP_003110242.1 256372418 8323744 complement(1742977..1743273) 1 NC_013124.1 hypothetical protein 1743273 8323744 Afer_1653 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110242.1 1742977 R 525909 CDS YP_003110243.1 256372419 8323745 1743533..1744555 1 NC_013124.1 KEGG: mkm:Mkms_5755 transposase, mutator type; hypothetical protein 1744555 8323745 Afer_1654 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110243.1 1743533 D 525909 CDS YP_003110244.1 256372420 8323746 1744560..1744829 1 NC_013124.1 KEGG: mva:Mvan_0585 transposase, mutator type; hypothetical protein 1744829 8323746 Afer_1655 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110244.1 1744560 D 525909 CDS YP_003110245.1 256372421 8323747 1745009..1745224 1 NC_013124.1 hypothetical protein 1745224 8323747 Afer_1656 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110245.1 1745009 D 525909 CDS YP_003110246.1 256372422 8323748 complement(1745265..1745771) 1 NC_013124.1 PFAM: methylpurine-DNA glycosylase (MPG); KEGG: rpt:Rpal_2856 DNA-3-methyladenine glycosylase; methylpurine-DNA glycosylase (MPG) 1745771 8323748 Afer_1657 Acidimicrobium ferrooxidans DSM 10331 methylpurine-DNA glycosylase (MPG) YP_003110246.1 1745265 R 525909 CDS YP_003110247.1 256372423 8323749 complement(1745743..1747143) 1 NC_013124.1 KEGG: rca:Rcas_3075 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 1747143 8323749 Afer_1658 Acidimicrobium ferrooxidans DSM 10331 argininosuccinate lyase YP_003110247.1 1745743 R 525909 CDS YP_003110248.1 256372424 8323750 complement(1747140..1748336) 1 NC_013124.1 KEGG: fra:Francci3_3169 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; ExsB family protein; argininosuccinate synthase 1748336 8323750 Afer_1659 Acidimicrobium ferrooxidans DSM 10331 argininosuccinate synthase YP_003110248.1 1747140 R 525909 CDS YP_003110249.1 256372425 8323751 complement(1748492..1748974) 1 NC_013124.1 TIGRFAM: arginine repressor; PFAM: arginine repressor; KEGG: msm:MSMEG_3771 arginine repressor; arginine repressor, ArgR 1748974 8323751 Afer_1660 Acidimicrobium ferrooxidans DSM 10331 arginine repressor, ArgR YP_003110249.1 1748492 R 525909 CDS YP_003110250.1 256372426 8323752 complement(1748980..1749924) 1 NC_013124.1 PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: ace:Acel_1259 ornithine carbamoyltransferase; aspartate/ornithine carbamoyltransferase Asp/Orn- binding region 1749924 8323752 Afer_1661 Acidimicrobium ferrooxidans DSM 10331 aspartate/ornithine carbamoyltransferase Asp/Orn- binding region YP_003110250.1 1748980 R 525909 CDS YP_003110251.1 256372427 8323753 complement(1749927..1751093) 1 NC_013124.1 PFAM: aminotransferase class-III; KEGG: art:Arth_1499 acetylornithine and succinylornithine aminotransferases; class III aminotransferase 1751093 8323753 Afer_1662 Acidimicrobium ferrooxidans DSM 10331 class III aminotransferase YP_003110251.1 1749927 R 525909 CDS YP_003110252.1 256372428 8323754 complement(1751090..1751965) 1 NC_013124.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: predicted protein; K00930 acetylglutamate kinase; acetylglutamate kinase 1751965 8323754 Afer_1663 Acidimicrobium ferrooxidans DSM 10331 acetylglutamate kinase YP_003110252.1 1751090 R 525909 CDS YP_003110253.1 256372429 8323755 complement(1751962..1753149) 1 NC_013124.1 KEGG: sen:SACE_5261 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 1753149 8323755 Afer_1664 Acidimicrobium ferrooxidans DSM 10331 arginine biosynthesis bifunctional protein ArgJ YP_003110253.1 1751962 R 525909 CDS YP_003110254.1 256372430 8323756 complement(1753140..1754153) 1 NC_013124.1 KEGG: pmy:Pmen_3933 N-acetyl-gamma-glutamyl- phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerization region; N-acetyl-gamma-glutamyl-phosphate reductase 1754153 8323756 Afer_1665 Acidimicrobium ferrooxidans DSM 10331 N-acetyl-gamma-glutamyl-phosphate reductase YP_003110254.1 1753140 R 525909 CDS YP_003110255.1 256372431 8323757 1754247..1754618 1 NC_013124.1 PFAM: protein of unknown function DUF805; KEGG: saq:Sare_1608 hypothetical protein; hypothetical protein 1754618 8323757 Afer_1666 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110255.1 1754247 D 525909 CDS YP_003110256.1 256372432 8323758 1754755..1756080 1 NC_013124.1 KEGG: stp:Strop_4549 hypothetical protein; hypothetical protein 1756080 8323758 Afer_1667 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110256.1 1754755 D 525909 CDS YP_003110257.1 256372433 8323759 1756184..1757710 1 NC_013124.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: fre:Franean1_2098 hypothetical protein; hypothetical protein 1757710 8323759 Afer_1668 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110257.1 1756184 D 525909 CDS YP_003110258.1 256372434 8323760 1757707..1758648 1 NC_013124.1 PFAM: protein of unknown function DUF403; KEGG: cms:CMS_0253 hypothetical protein; hypothetical protein 1758648 8323760 Afer_1669 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110258.1 1757707 D 525909 CDS YP_003110259.1 256372435 8323761 1758645..1759478 1 NC_013124.1 PFAM: transglutaminase; transglutaminase; SMART: transglutaminase; KEGG: rha:RHA1_ro01282 transglutaminase-like enzyme; transglutaminase 1759478 8323761 Afer_1670 Acidimicrobium ferrooxidans DSM 10331 transglutaminase YP_003110259.1 1758645 D 525909 CDS YP_003110260.1 256372436 8323762 complement(1760162..1760566) 1 NC_013124.1 PFAM: protein of unknown function DUF1634; KEGG: sus:Acid_5631 hypothetical protein; hypothetical protein 1760566 8323762 Afer_1671 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110260.1 1760162 R 525909 CDS YP_003110261.1 256372437 8323763 complement(1760563..1761408) 1 NC_013124.1 PFAM: protein of unknown function DUF81; KEGG: mxa:MXAN_4782 hypothetical protein; hypothetical protein 1761408 8323763 Afer_1672 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110261.1 1760563 R 525909 CDS YP_003110262.1 256372438 8323764 complement(1761430..1763805) 1 NC_013124.1 KEGG: ade:Adeh_1971 phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 1763805 8323764 Afer_1673 Acidimicrobium ferrooxidans DSM 10331 phenylalanyl-tRNA synthetase subunit beta YP_003110262.1 1761430 R 525909 CDS YP_003110263.1 256372439 8323765 complement(1763802..1764902) 1 NC_013124.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: afw:Anae109_1883 phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1764902 8323765 Afer_1674 Acidimicrobium ferrooxidans DSM 10331 phenylalanyl-tRNA synthetase subunit alpha YP_003110263.1 1763802 R 525909 CDS YP_003110264.1 256372440 8323766 complement(1764944..1765642) 1 NC_013124.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: sru:SRU_0504 RNA methyltransferase; tRNA/rRNA methyltransferase SpoU 1765642 8323766 Afer_1675 Acidimicrobium ferrooxidans DSM 10331 tRNA/rRNA methyltransferase SpoU YP_003110264.1 1764944 R 525909 CDS YP_003110265.1 256372441 8323767 complement(1765707..1766075) 1 NC_013124.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: kra:Krad_3167 ribosomal protein L20; 50S ribosomal protein L20 1766075 8323767 Afer_1676 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L20 YP_003110265.1 1765707 R 525909 CDS YP_003110266.1 256372442 8323768 complement(1766096..1766293) 1 NC_013124.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: dau:Daud_1382 ribosomal protein L35; 50S ribosomal protein L35 1766293 8323768 Afer_1677 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L35 YP_003110266.1 1766096 R 525909 CDS YP_003110267.1 256372443 8323769 complement(1766488..1767000) 1 NC_013124.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: saq:Sare_1875 translation initiation factor IF-3; translation initiation factor IF-3 1767000 8323769 Afer_1678 Acidimicrobium ferrooxidans DSM 10331 translation initiation factor IF-3 YP_003110267.1 1766488 R 525909 CDS YP_003110268.1 256372444 8323770 complement(1767145..1767528) 1 NC_013124.1 hypothetical protein 1767528 8323770 Afer_1679 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110268.1 1767145 R 525909 CDS YP_003110269.1 256372445 8323771 complement(1767554..1767832) 1 NC_013124.1 hypothetical protein 1767832 8323771 Afer_1680 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110269.1 1767554 R 525909 CDS YP_003110270.1 256372446 8323772 complement(1767839..1768714) 1 NC_013124.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 1768714 hisG 8323772 hisG Acidimicrobium ferrooxidans DSM 10331 ATP phosphoribosyltransferase YP_003110270.1 1767839 R 525909 CDS YP_003110271.1 256372447 8323773 complement(1768708..1769196) 1 NC_013124.1 KEGG: ent:Ent638_0883 riboflavin synthase subunit beta; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 1769196 8323773 Afer_1682 Acidimicrobium ferrooxidans DSM 10331 6,7-dimethyl-8-ribityllumazine synthase YP_003110271.1 1768708 R 525909 CDS YP_003110272.1 256372448 8323774 complement(1769193..1770446) 1 NC_013124.1 KEGG: Os02g0572400; hypothetical protein ; K01497 GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2- butanone 4-phosphate synthase; PFAM: GTP cyclohydrolase II; 34-dihydroxy-2- butanone 4-phosphate synthase; GTP cyclohydrolase II 1770446 8323774 Afer_1683 Acidimicrobium ferrooxidans DSM 10331 GTP cyclohydrolase II YP_003110272.1 1769193 R 525909 CDS YP_003110273.1 256372449 8323775 complement(1770443..1771033) 1 NC_013124.1 PFAM: Lumazine-binding protein; KEGG: tfu:Tfu_1078 riboflavin synthase subunit alpha; Lumazine-binding protein 1771033 8323775 Afer_1684 Acidimicrobium ferrooxidans DSM 10331 Lumazine-binding protein YP_003110273.1 1770443 R 525909 CDS YP_003110274.1 256372450 8323776 complement(1771084..1772136) 1 NC_013124.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: gme:Gmet_1624 5-amino-6-(5- phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; riboflavin biosynthesis protein RibD 1772136 8323776 Afer_1685 Acidimicrobium ferrooxidans DSM 10331 riboflavin biosynthesis protein RibD YP_003110274.1 1771084 R 525909 CDS YP_003110275.1 256372451 8323777 complement(1772133..1772624) 1 NC_013124.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: fra:Francci3_4037 molybdopterin adenylyltransferase; molybdenum cofactor synthesis domain-containing protein 1772624 8323777 Afer_1686 Acidimicrobium ferrooxidans DSM 10331 molybdenum cofactor synthesis domain-containing protein YP_003110275.1 1772133 R 525909 CDS YP_003110276.1 256372452 8323778 complement(1772625..1773515) 1 NC_013124.1 PFAM: formyl transferase domain protein; KEGG: nca:Noca_2442 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 1773515 8323778 Afer_1687 Acidimicrobium ferrooxidans DSM 10331 methionyl-tRNA formyltransferase YP_003110276.1 1772625 R 525909 CDS YP_003110277.1 256372453 8323779 complement(1773518..1774012) 1 NC_013124.1 KEGG: ace:Acel_1279 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 1774012 8323779 Afer_1688 Acidimicrobium ferrooxidans DSM 10331 peptide deformylase YP_003110277.1 1773518 R 525909 CDS YP_003110278.1 256372454 8323780 complement(1774048..1775172) 1 NC_013124.1 KEGG: GK21128; hypothetical protein 1775172 8323780 Afer_1689 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110278.1 1774048 R 525909 CDS YP_003110279.1 256372455 8323781 complement(1775173..1776933) 1 NC_013124.1 KEGG: lch:Lcho_0048 electron transport protein SCO1/SenC; hypothetical protein 1776933 8323781 Afer_1690 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110279.1 1775173 R 525909 CDS YP_003110280.1 256372456 8323782 complement(1777062..1778807) 1 NC_013124.1 KEGG: afw:Anae109_0770 primosomal protein N'; Primosomal protein N' 1778807 8323782 Afer_1691 Acidimicrobium ferrooxidans DSM 10331 Primosomal protein N' YP_003110280.1 1777062 R 525909 CDS YP_003110281.1 256372457 8323783 complement(1778809..1780002) 1 NC_013124.1 KEGG: kra:Krad_2989 methionine adenosyltransferase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 1780002 8323783 Afer_1692 Acidimicrobium ferrooxidans DSM 10331 S-adenosylmethionine synthetase YP_003110281.1 1778809 R 525909 CDS YP_003110282.1 256372458 8323784 complement(1780035..1781237) 1 NC_013124.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; KEGG: ace:Acel_1291 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 1781237 8323784 Afer_1693 Acidimicrobium ferrooxidans DSM 10331 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_003110282.1 1780035 R 525909 CDS YP_003110283.1 256372459 8323785 complement(1781242..1781526) 1 NC_013124.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; KEGG: fra:Francci3_3194 DNA-directed RNA polymerase subunit omega; DNA-directed RNA polymerase subunit omega 1781526 8323785 Afer_1694 Acidimicrobium ferrooxidans DSM 10331 DNA-directed RNA polymerase subunit omega YP_003110283.1 1781242 R 525909 CDS YP_003110284.1 256372460 8323786 complement(1781571..1782113) 1 NC_013124.1 KEGG: syw:SYNW1837 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; Guanylate kinase 1782113 8323786 Afer_1695 Acidimicrobium ferrooxidans DSM 10331 Guanylate kinase YP_003110284.1 1781571 R 525909 CDS YP_003110285.1 256372461 8323787 complement(1782110..1782430) 1 NC_013124.1 KEGG: saq:Sare_1853 hypothetical protein; hypothetical protein 1782430 8323787 Afer_1696 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110285.1 1782110 R 525909 CDS YP_003110286.1 256372462 8323788 complement(1782489..1783190) 1 NC_013124.1 KEGG: nfa:pnf11210 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 1783190 8323788 Afer_1697 Acidimicrobium ferrooxidans DSM 10331 orotidine 5'-phosphate decarboxylase YP_003110286.1 1782489 R 525909 CDS YP_003110287.1 256372463 8323789 complement(1783187..1784116) 1 NC_013124.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: gur:Gura_2150 dihydroorotate dehydrogenase family protein; dihydroorotate dehydrogenase family protein 1784116 8323789 Afer_1698 Acidimicrobium ferrooxidans DSM 10331 dihydroorotate dehydrogenase family protein YP_003110287.1 1783187 R 525909 CDS YP_003110288.1 256372464 8323790 complement(1784117..1787419) 1 NC_013124.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl- phosphate synthetase large chain domain protein; KEGG: gvi:gll1769 carbamoyl phosphate synthetase large chain; carbamoyl-phosphate synthase, large subunit 1787419 8323790 Afer_1699 Acidimicrobium ferrooxidans DSM 10331 carbamoyl-phosphate synthase, large subunit YP_003110288.1 1784117 R 525909 CDS YP_003110289.1 256372465 8323791 complement(1787412..1788557) 1 NC_013124.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl- phosphate synthase small chain; KEGG: ade:Adeh_1620 carbamoyl phosphate synthase small subunit; carbamoyl-phosphate synthase, small subunit 1788557 8323791 Afer_1700 Acidimicrobium ferrooxidans DSM 10331 carbamoyl-phosphate synthase, small subunit YP_003110289.1 1787412 R 525909 CDS YP_003110290.1 256372466 8323792 complement(1788544..1789875) 1 NC_013124.1 PFAM: amidohydrolase; KEGG: ser:SERP0767 dihydroorotase; amidohydrolase 1789875 8323792 Afer_1701 Acidimicrobium ferrooxidans DSM 10331 amidohydrolase YP_003110290.1 1788544 R 525909 CDS YP_003110291.1 256372467 8323793 complement(1789863..1790795) 1 NC_013124.1 PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: ttj:TTHA0782 aspartate carbamoyltransferase catalytic subunit; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein 1790795 8323793 Afer_1702 Acidimicrobium ferrooxidans DSM 10331 aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein YP_003110291.1 1789863 R 525909 CDS YP_003110292.1 256372468 8323794 complement(1790792..1791301) 1 NC_013124.1 PFAM: phosphoribosyltransferase; KEGG: tfu:Tfu_1053 pyrimidine regulatory protein PyrR; Uracil phosphoribosyltransferase 1791301 8323794 Afer_1703 Acidimicrobium ferrooxidans DSM 10331 Uracil phosphoribosyltransferase YP_003110292.1 1790792 R 525909 CDS YP_003110293.1 256372469 8323795 complement(1791480..1791605) 1 NC_013124.1 hypothetical protein 1791605 8323795 Afer_1704 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110293.1 1791480 R 525909 CDS YP_003110294.1 256372470 8323796 complement(1791752..1792519) 1 NC_013124.1 KEGG: sus:Acid_6905 hypothetical protein; hypothetical protein 1792519 8323796 Afer_1705 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110294.1 1791752 R 525909 CDS YP_003110295.1 256372471 8323797 complement(1792661..1793314) 1 NC_013124.1 KEGG: bpm:BURPS1710b_0944 cytochrome c oxidase subunit I; hypothetical protein 1793314 8323797 Afer_1706 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110295.1 1792661 R 525909 CDS YP_003110296.1 256372472 8323798 complement(1793314..1795263) 1 NC_013124.1 PFAM: cytochrome c oxidase subunit I; KEGG: syp:SYNPCC7002_A0726 cytochrome oxidase II large subunit; Cytochrome-c oxidase 1795263 8323798 Afer_1707 Acidimicrobium ferrooxidans DSM 10331 Cytochrome-c oxidase YP_003110296.1 1793314 R 525909 CDS YP_003110297.1 256372473 8323799 complement(1795289..1796251) 1 NC_013124.1 PFAM: cytochrome c oxidase subunit II; KEGG: gvi:glr0739 cytochrome c oxidase subunit II; cytochrome c oxidase subunit II 1796251 8323799 Afer_1708 Acidimicrobium ferrooxidans DSM 10331 cytochrome c oxidase subunit II YP_003110297.1 1795289 R 525909 CDS YP_003110298.1 256372474 8323800 complement(1796248..1796961) 1 NC_013124.1 KEGG: tvo:TVN0360 hypothetical protein; hypothetical protein 1796961 8323800 Afer_1709 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110298.1 1796248 R 525909 CDS YP_003110299.1 256372475 8323801 complement(1797029..1797655) 1 NC_013124.1 PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; KEGG: ttj:TTHA1728 hypothetical protein; Redoxin domain-containing protein 1797655 8323801 Afer_1710 Acidimicrobium ferrooxidans DSM 10331 Redoxin domain-containing protein YP_003110299.1 1797029 R 525909 CDS YP_003110300.1 256372476 8323802 complement(1797652..1798545) 1 NC_013124.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: kra:Krad_2921 protoheme IX farnesyltransferase; protoheme IX farnesyltransferase 1798545 8323802 Afer_1711 Acidimicrobium ferrooxidans DSM 10331 protoheme IX farnesyltransferase YP_003110300.1 1797652 R 525909 CDS YP_003110301.1 256372477 8323803 1798662..1799837 1 NC_013124.1 PFAM: peptidase M24; KEGG: cef:CE1738 cytoplasmic peptidase; peptidase M24 1799837 8323803 Afer_1712 Acidimicrobium ferrooxidans DSM 10331 peptidase M24 YP_003110301.1 1798662 D 525909 CDS YP_003110302.1 256372478 8323804 1799909..1800478 1 NC_013124.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; KEGG: tfu:Tfu_1093 elongation factor P; translation elongation factor P 1800478 8323804 Afer_1713 Acidimicrobium ferrooxidans DSM 10331 translation elongation factor P YP_003110302.1 1799909 D 525909 CDS YP_003110303.1 256372479 8323805 1800471..1800908 1 NC_013124.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: kra:Krad_3008 NusB antitermination factor; NusB antitermination factor 1800908 8323805 Afer_1714 Acidimicrobium ferrooxidans DSM 10331 NusB antitermination factor YP_003110303.1 1800471 D 525909 CDS YP_003110304.1 256372480 8323806 complement(1800905..1801573) 1 NC_013124.1 hypothetical protein 1801573 8323806 Afer_1715 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110304.1 1800905 R 525909 CDS YP_003110305.1 256372481 8323807 complement(1801661..1802122) 1 NC_013124.1 KEGG: sth:STH1866 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase, type II 1802122 8323807 Afer_1716 Acidimicrobium ferrooxidans DSM 10331 3-dehydroquinate dehydratase, type II YP_003110305.1 1801661 R 525909 CDS YP_003110306.1 256372482 8323808 complement(1802119..1803183) 1 NC_013124.1 PFAM: 3-dehydroquinate synthase; KEGG: saq:Sare_1253 3-dehydroquinate synthase; 3-dehydroquinate synthase 1803183 8323808 Afer_1717 Acidimicrobium ferrooxidans DSM 10331 3-dehydroquinate synthase YP_003110306.1 1802119 R 525909 CDS YP_003110307.1 256372483 8323809 complement(1803183..1804361) 1 NC_013124.1 KEGG: stp:Strop_1845 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1804361 8323809 Afer_1718 Acidimicrobium ferrooxidans DSM 10331 chorismate synthase YP_003110307.1 1803183 R 525909 CDS YP_003110308.1 256372484 8323810 complement(1804366..1805031) 1 NC_013124.1 KEGG: kra:Krad_4652 hypothetical protein; hypothetical protein 1805031 8323810 Afer_1719 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110308.1 1804366 R 525909 CDS YP_003110309.1 256372485 8323811 1805110..1805829 1 NC_013124.1 KEGG: mul:MUL_4739 phosphotyrosine protein phosphatase PtpB; protein tyrosine/serine phosphatase 1805829 8323811 Afer_1720 Acidimicrobium ferrooxidans DSM 10331 protein tyrosine/serine phosphatase YP_003110309.1 1805110 D 525909 CDS YP_003110310.1 256372486 8323812 complement(1805910..1806392) 1 NC_013124.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: msm:MSMEG_5595 MarR-family protein transcriptional regulator; MarR family transcriptional regulator 1806392 8323812 Afer_1721 Acidimicrobium ferrooxidans DSM 10331 MarR family transcriptional regulator YP_003110310.1 1805910 R 525909 CDS YP_003110311.1 256372487 8323813 1806454..1807005 1 NC_013124.1 PFAM: YceI family protein; KEGG: ace:Acel_0530 YceI family protein; YceI family protein 1807005 8323813 Afer_1722 Acidimicrobium ferrooxidans DSM 10331 YceI family protein YP_003110311.1 1806454 D 525909 CDS YP_003110312.1 256372488 8323814 complement(1807159..1807773) 1 NC_013124.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: pcr:Pcryo_2202 HesB/YadR/YfhF; nitrogen-fixing NifU domain-containing protein 1807773 8323814 Afer_1723 Acidimicrobium ferrooxidans DSM 10331 nitrogen-fixing NifU domain-containing protein YP_003110312.1 1807159 R 525909 CDS YP_003110313.1 256372489 8323815 1807813..1809018 1 NC_013124.1 KEGG: ank:AnaeK_1423 protein of unknown function DUF201; hypothetical protein 1809018 8323815 Afer_1724 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110313.1 1807813 D 525909 CDS YP_003110314.1 256372490 8323816 1809029..1810345 1 NC_013124.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ade:Adeh_2438 radical SAM family protein; Radical SAM domain-containing protein 1810345 8323816 Afer_1725 Acidimicrobium ferrooxidans DSM 10331 Radical SAM domain-containing protein YP_003110314.1 1809029 D 525909 CDS YP_003110315.1 256372491 8323817 1810342..1812123 1 NC_013124.1 PFAM: UvrD/REP helicase; HRDC domain protein; KEGG: sen:SACE_1092 ATP-dependent DNA helicase; UvrD/REP helicase 1812123 8323817 Afer_1726 Acidimicrobium ferrooxidans DSM 10331 UvrD/REP helicase YP_003110315.1 1810342 D 525909 CDS YP_003110316.1 256372492 8323818 complement(1812120..1812896) 1 NC_013124.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ace:Acel_1469 exodeoxyribonuclease III; exodeoxyribonuclease III Xth 1812896 8323818 Afer_1727 Acidimicrobium ferrooxidans DSM 10331 exodeoxyribonuclease III Xth YP_003110316.1 1812120 R 525909 CDS YP_003110317.1 256372493 8323819 complement(1812893..1813321) 1 NC_013124.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rxy:Rxyl_1380 3-hydroxyacyl-[acyl-carrier- protein] dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1813321 8323819 Afer_1728 Acidimicrobium ferrooxidans DSM 10331 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003110317.1 1812893 R 525909 CDS YP_003110318.1 256372494 8323820 complement(1813400..1813576) 1 NC_013124.1 PFAM: Protein of unknown function DUF1059; KEGG: rec:RHECIAT_CH0003208 hypothetical protein; hypothetical protein 1813576 8323820 Afer_1729 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110318.1 1813400 R 525909 CDS YP_003110319.1 256372495 8323821 complement(1813573..1813749) 1 NC_013124.1 hypothetical protein 1813749 8323821 Afer_1730 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110319.1 1813573 R 525909 CDS YP_003110320.1 256372496 8323822 complement(1813805..1814941) 1 NC_013124.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: kra:Krad_2441 diguanylate phosphodiesterase; diguanylate phosphodiesterase 1814941 8323822 Afer_1731 Acidimicrobium ferrooxidans DSM 10331 diguanylate phosphodiesterase YP_003110320.1 1813805 R 525909 CDS YP_003110321.1 256372497 8323823 1815072..1818905 1 NC_013124.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; alpha-ketoglutarate decarboxylase 1818905 kgd 8323823 kgd Acidimicrobium ferrooxidans DSM 10331 alpha-ketoglutarate decarboxylase YP_003110321.1 1815072 D 525909 CDS YP_003110322.1 256372498 8323824 complement(1818936..1819691) 1 NC_013124.1 PFAM: alpha/beta hydrolase fold; KEGG: fre:Franean1_2175 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1819691 8323824 Afer_1733 Acidimicrobium ferrooxidans DSM 10331 alpha/beta hydrolase fold protein YP_003110322.1 1818936 R 525909 CDS YP_003110323.1 256372499 8323825 1819745..1821019 1 NC_013124.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: rxy:Rxyl_1713 hypothetical protein; diacylglycerol kinase catalytic protein 1821019 8323825 Afer_1734 Acidimicrobium ferrooxidans DSM 10331 diacylglycerol kinase catalytic protein YP_003110323.1 1819745 D 525909 CDS YP_003110324.1 256372500 8323826 complement(1821000..1821923) 1 NC_013124.1 PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: ote:Oter_2666 hypothetical protein; hypothetical protein 1821923 8323826 Afer_1735 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110324.1 1821000 R 525909 CDS YP_003110325.1 256372501 8323827 complement(1822115..1822546) 1 NC_013124.1 PFAM: heat shock protein Hsp20; KEGG: rha:RHA1_ro08348 heat shock protein (18 kDa antigen-like protein); heat shock protein Hsp20 1822546 8323827 Afer_1736 Acidimicrobium ferrooxidans DSM 10331 heat shock protein Hsp20 YP_003110325.1 1822115 R 525909 CDS YP_003110326.1 256372502 8323828 1822698..1824062 1 NC_013124.1 PFAM: ABC-1 domain protein; KEGG: fal:FRAAL6034 ABC transporter, ATP-binding protein; ABC-1 domain-containing protein 1824062 8323828 Afer_1737 Acidimicrobium ferrooxidans DSM 10331 ABC-1 domain-containing protein YP_003110326.1 1822698 D 525909 CDS YP_003110327.1 256372503 8323829 1824059..1824997 1 NC_013124.1 KEGG: lbr:LVIS_2016 hypothetical protein; hypothetical protein 1824997 8323829 Afer_1738 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110327.1 1824059 D 525909 CDS YP_003110328.1 256372504 8323830 1825039..1825968 1 NC_013124.1 PFAM: UbiA prenyltransferase; KEGG: cdi:DIP2196 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; UbiA prenyltransferase 1825968 8323830 Afer_1739 Acidimicrobium ferrooxidans DSM 10331 UbiA prenyltransferase YP_003110328.1 1825039 D 525909 CDS YP_003110329.1 256372505 8323831 1825973..1827361 1 NC_013124.1 PFAM: FAD linked oxidase domain protein; KEGG: sco:SCO4842 oxidoreductase; FAD linked oxidase domain-containing protein 1827361 8323831 Afer_1740 Acidimicrobium ferrooxidans DSM 10331 FAD linked oxidase domain-containing protein YP_003110329.1 1825973 D 525909 CDS YP_003110330.1 256372506 8323832 1827371..1828129 1 NC_013124.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sco:SCO4841 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1828129 8323832 Afer_1741 Acidimicrobium ferrooxidans DSM 10331 short-chain dehydrogenase/reductase SDR YP_003110330.1 1827371 D 525909 CDS YP_003110331.1 256372507 8323833 complement(1828145..1831243) 1 NC_013124.1 TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; Two component regulator propeller; KEGG: ace:Acel_0423 SpoIID/LytB domain-containing protein; SpoIID/LytB domain-containing protein 1831243 8323833 Afer_1742 Acidimicrobium ferrooxidans DSM 10331 SpoIID/LytB domain-containing protein YP_003110331.1 1828145 R 525909 CDS YP_003110332.1 256372508 8323834 1831382..1832335 1 NC_013124.1 KEGG: azo:azo3908 serine/threonine protein kinase; hypothetical protein 1832335 8323834 Afer_1743 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110332.1 1831382 D 525909 CDS YP_003110333.1 256372509 8323835 1832335..1833381 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_4614 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 1833381 8323835 Afer_1744 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003110333.1 1832335 D 525909 CDS YP_003110334.1 256372510 8323836 1833378..1834454 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: met:M446_6932 glycosyl transferase group 1; group 1 glycosyl transferase 1834454 8323836 Afer_1745 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003110334.1 1833378 D 525909 CDS YP_003110335.1 256372511 8323837 1834451..1835602 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2677 glycosyl transferase family protein; group 1 glycosyl transferase 1835602 8323837 Afer_1746 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003110335.1 1834451 D 525909 CDS YP_003110336.1 256372512 8323838 complement(1835583..1836785) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL1238 ABC transporter ATP-binding protein (partial match); ABC transporter-like protein 1836785 8323838 Afer_1747 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003110336.1 1835583 R 525909 CDS YP_003110337.1 256372513 8323839 complement(1836788..1837738) 1 NC_013124.1 PFAM: ABC-2 type transporter; KEGG: fra:Francci3_0724 hypothetical protein; ABC-2 type transporter 1837738 8323839 Afer_1748 Acidimicrobium ferrooxidans DSM 10331 ABC-2 type transporter YP_003110337.1 1836788 R 525909 CDS YP_003110338.1 256372514 8323840 complement(1837747..1838382) 1 NC_013124.1 PFAM: peptidase S14 ClpP; KEGG: stp:Strop_3499 endopeptidase Clp; Endopeptidase Clp 1838382 8323840 Afer_1749 Acidimicrobium ferrooxidans DSM 10331 Endopeptidase Clp YP_003110338.1 1837747 R 525909 CDS YP_003110339.1 256372515 8323842 complement(1838566..1839132) 1 NC_013124.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: sth:STH344 hypothetical protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1839132 8323842 Afer_1750 Acidimicrobium ferrooxidans DSM 10331 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_003110339.1 1838566 R 525909 CDS YP_003110340.1 256372516 8323843 complement(1839129..1839845) 1 NC_013124.1 KEGG: hha:Hhal_0973 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 1839845 8323843 Afer_1751 Acidimicrobium ferrooxidans DSM 10331 ribonuclease PH YP_003110340.1 1839129 R 525909 CDS YP_003110341.1 256372517 8323844 complement(1839877..1840707) 1 NC_013124.1 KEGG: fal:FRAAL1505 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 1840707 8323844 Afer_1752 Acidimicrobium ferrooxidans DSM 10331 glutamate racemase YP_003110341.1 1839877 R 525909 CDS YP_003110342.1 256372518 8323845 complement(1840697..1841110) 1 NC_013124.1 PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; KEGG: sth:STH1150 hypothetical protein; Mov34/MPN/PAD-1 family protein 1841110 8323845 Afer_1753 Acidimicrobium ferrooxidans DSM 10331 Mov34/MPN/PAD-1 family protein YP_003110342.1 1840697 R 525909 CDS YP_003110343.1 256372519 8323846 1841209..1841724 1 NC_013124.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: sfu:Sfum_0771 SsrA-binding protein; SsrA-binding protein 1841724 8323846 Afer_1754 Acidimicrobium ferrooxidans DSM 10331 SsrA-binding protein YP_003110343.1 1841209 D 525909 CDS YP_003110344.1 256372520 8323848 1842188..1842631 1 NC_013124.1 hypothetical protein 1842631 8323848 Afer_1755 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110344.1 1842188 D 525909 CDS YP_003110345.1 256372521 8323851 1843500..1844258 1 NC_013124.1 KEGG: tcx:Tcr_0902 hypothetical protein; hypothetical protein 1844258 8323851 Afer_1758 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110345.1 1843500 D 525909 CDS YP_003110346.1 256372522 8323852 complement(1844282..1845316) 1 NC_013124.1 KEGG: scl:sce3939 hypothetical protein; hypothetical protein 1845316 8323852 Afer_1759 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110346.1 1844282 R 525909 CDS YP_003110347.1 256372523 8323853 complement(1845354..1846238) 1 NC_013124.1 PFAM: protein of unknown function DUF214; KEGG: tfu:Tfu_2477 cell division protein FtsX; hypothetical protein 1846238 8323853 Afer_1760 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110347.1 1845354 R 525909 CDS YP_003110348.1 256372524 8323854 complement(1846235..1846930) 1 NC_013124.1 KEGG: ace:Acel_1731 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 1846930 8323854 Afer_1761 Acidimicrobium ferrooxidans DSM 10331 cell division ATP-binding protein FtsE YP_003110348.1 1846235 R 525909 CDS YP_003110349.1 256372525 8323855 complement(1846995..1848104) 1 NC_013124.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: rxy:Rxyl_1620 bacterial peptide chain release factor 2 (bRF-2); peptide chain release factor 2 1848104 8323855 Afer_1762 Acidimicrobium ferrooxidans DSM 10331 peptide chain release factor 2 YP_003110349.1 1846995 R 525909 CDS YP_003110350.1 256372526 8323856 complement(1848101..1850719) 1 NC_013124.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: ace:Acel_1759 preprotein translocase subunit SecA; preprotein translocase subunit SecA 1850719 8323856 Afer_1763 Acidimicrobium ferrooxidans DSM 10331 preprotein translocase subunit SecA YP_003110350.1 1848101 R 525909 CDS YP_003110351.1 256372527 8323857 complement(1850741..1851289) 1 NC_013124.1 TIGRFAM: ribosomal subunit interface protein; KEGG: rxy:Rxyl_1622 sigma 54 modulation protein / SSU ribosomal protein S30P; sigma 54 modulation protein/30S ribosomal protein S30EA 1851289 8323857 Afer_1764 Acidimicrobium ferrooxidans DSM 10331 sigma 54 modulation protein/30S ribosomal protein S30EA YP_003110351.1 1850741 R 525909 CDS YP_003110352.1 256372528 8323858 complement(1851300..1852577) 1 NC_013124.1 KEGG: gvi:glr3183 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD- binding; S-adenosyl-L-homocysteine hydrolase; adenosylhomocysteinase 1852577 8323858 Afer_1765 Acidimicrobium ferrooxidans DSM 10331 adenosylhomocysteinase YP_003110352.1 1851300 R 525909 CDS YP_003110353.1 256372529 8323859 complement(1852618..1853643) 1 NC_013124.1 PFAM: sugar isomerase (SIS); KEGG: dau:Daud_0299 bifunctional phosphoglucose/phosphomannose isomerase; Mannose-6-phosphate isomerase 1853643 8323859 Afer_1766 Acidimicrobium ferrooxidans DSM 10331 Mannose-6-phosphate isomerase YP_003110353.1 1852618 R 525909 CDS YP_003110354.1 256372530 8323860 complement(1853631..1853900) 1 NC_013124.1 PFAM: protein of unknown function DUF343; KEGG: mva:Mvan_3299 hypothetical protein; hypothetical protein 1853900 8323860 Afer_1767 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110354.1 1853631 R 525909 CDS YP_003110355.1 256372531 8323861 complement(1853897..1855252) 1 NC_013124.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: fre:Franean1_5858 phosphomannomutase/phosphoglucomutase; phosphomannomutase 1855252 8323861 Afer_1768 Acidimicrobium ferrooxidans DSM 10331 phosphomannomutase YP_003110355.1 1853897 R 525909 CDS YP_003110356.1 256372532 8323862 complement(1855360..1855569) 1 NC_013124.1 hypothetical protein 1855569 8323862 Afer_1769 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110356.1 1855360 R 525909 CDS YP_003110357.1 256372533 8323863 1855712..1857250 1 NC_013124.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: lic:LIC13009 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1857250 8323863 Afer_1770 Acidimicrobium ferrooxidans DSM 10331 acyl-CoA dehydrogenase domain-containing protein YP_003110357.1 1855712 D 525909 CDS YP_003110358.1 256372534 8323864 1857247..1858053 1 NC_013124.1 hypothetical protein 1858053 8323864 Afer_1771 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110358.1 1857247 D 525909 CDS YP_003110359.1 256372535 8323865 complement(1858058..1858744) 1 NC_013124.1 PFAM: peptidase C60 sortase A and B; KEGG: kra:Krad_3106 peptidase C60 sortase A and B; peptidase C60 sortase A and B 1858744 8323865 Afer_1772 Acidimicrobium ferrooxidans DSM 10331 peptidase C60 sortase A and B YP_003110359.1 1858058 R 525909 CDS YP_003110360.1 256372536 8323866 1858822..1859094 1 NC_013124.1 hypothetical protein 1859094 8323866 Afer_1773 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110360.1 1858822 D 525909 CDS YP_003110361.1 256372537 8323867 1859091..1859420 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_1861 transposase IS3/IS911; transposase IS3/IS911 family protein 1859420 8323867 Afer_1774 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003110361.1 1859091 D 525909 CDS YP_003110362.1 256372538 8323868 1859417..1860295 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: amr:AM1_A0193 integrase, catalytic region; integrase catalytic subunit 1860295 8323868 Afer_1775 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003110362.1 1859417 D 525909 CDS YP_003110363.1 256372539 8323869 complement(1860298..1861944) 1 NC_013124.1 KEGG: H02F09.3; hypothetical protein 1861944 8323869 Afer_1776 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110363.1 1860298 R 525909 CDS YP_003110364.1 256372540 8323870 complement(1862263..1863201) 1 NC_013124.1 PFAM: HpcH/HpaI aldolase; KEGG: sgr:SGR_1172 lyase; Citrate (pro-3S)-lyase 1863201 8323870 Afer_1777 Acidimicrobium ferrooxidans DSM 10331 Citrate (pro-3S)-lyase YP_003110364.1 1862263 R 525909 CDS YP_003110365.1 256372541 8323871 complement(1863240..1864916) 1 NC_013124.1 KEGG: fal:FRAAL5900 trehalose synthase (maltose alpha-D-glucosyltransferase); TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase 1864916 8323871 Afer_1778 Acidimicrobium ferrooxidans DSM 10331 trehalose synthase YP_003110365.1 1863240 R 525909 CDS YP_003110366.1 256372542 8323872 complement(1864916..1865689) 1 NC_013124.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sen:SACE_6207 enoyl-CoA hydratase-isomerase; enoyl-CoA hydratase/isomerase 1865689 8323872 Afer_1779 Acidimicrobium ferrooxidans DSM 10331 enoyl-CoA hydratase/isomerase YP_003110366.1 1864916 R 525909 CDS YP_003110367.1 256372543 8323873 complement(1865682..1866647) 1 NC_013124.1 TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: saq:Sare_3990 LAO/AO transport system ATPase; LAO/AO transport system ATPase 1866647 8323873 Afer_1780 Acidimicrobium ferrooxidans DSM 10331 LAO/AO transport system ATPase YP_003110367.1 1865682 R 525909 CDS YP_003110368.1 256372544 8323874 complement(1866644..1867915) 1 NC_013124.1 TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); KEGG: nfa:nfa10690 UDP-N-acetylglucosamine 1- carboxyvinyltransferase; UDP-N-acetylglucosamine1- carboxyvinyltransferase 1867915 8323874 Afer_1781 Acidimicrobium ferrooxidans DSM 10331 UDP-N-acetylglucosamine1- carboxyvinyltransferase YP_003110368.1 1866644 R 525909 CDS YP_003110369.1 256372545 8323875 complement(1867955..1869430) 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce1439 major facilitator superfamily permease; major facilitator superfamily protein 1869430 8323875 Afer_1782 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003110369.1 1867955 R 525909 CDS YP_003110370.1 256372546 8323876 complement(1869447..1870130) 1 NC_013124.1 PFAM: dienelactone hydrolase; BAAT/Acyl-CoA thioester hydrolase; KEGG: scl:sce0062 carboxymethylenebutenolidase; carboxymethylenebutenolidase 1870130 8323876 Afer_1783 Acidimicrobium ferrooxidans DSM 10331 carboxymethylenebutenolidase YP_003110370.1 1869447 R 525909 CDS YP_003110371.1 256372547 8323877 complement(1870163..1870621) 1 NC_013124.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: mab:MAB_3296 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN- binding protein 1870621 8323877 Afer_1784 Acidimicrobium ferrooxidans DSM 10331 pyridoxamine 5'-phosphate oxidase-like FMN- binding protein YP_003110371.1 1870163 R 525909 CDS YP_003110372.1 256372548 8323878 complement(1870605..1871138) 1 NC_013124.1 hypothetical protein 1871138 8323878 Afer_1785 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110372.1 1870605 R 525909 CDS YP_003110373.1 256372549 8323879 complement(1871138..1872529) 1 NC_013124.1 PFAM: fumarate lyase; KEGG: sgr:SGR_2491 fumarate hydratase C; fumarate lyase 1872529 8323879 Afer_1786 Acidimicrobium ferrooxidans DSM 10331 fumarate lyase YP_003110373.1 1871138 R 525909 CDS YP_003110374.1 256372550 8323880 1872585..1873523 1 NC_013124.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: msm:MSMEG_3306 zinc-binding alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 1873523 8323880 Afer_1787 Acidimicrobium ferrooxidans DSM 10331 alcohol dehydrogenase GroES domain-containing protein YP_003110374.1 1872585 D 525909 CDS YP_003110375.1 256372551 8323881 complement(1873460..1873795) 1 NC_013124.1 hypothetical protein 1873795 8323881 Afer_1788 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110375.1 1873460 R 525909 CDS YP_003110376.1 256372552 8323882 1874059..1874643 1 NC_013124.1 PFAM: regulatory protein TetR; KEGG: sgr:SGR_6910 TetR family transcriptional regulator; TetR family transcriptional regulator 1874643 8323882 Afer_1789 Acidimicrobium ferrooxidans DSM 10331 TetR family transcriptional regulator YP_003110376.1 1874059 D 525909 CDS YP_003110377.1 256372553 8323883 complement(1874738..1876351) 1 NC_013124.1 KEGG: pmy:Pmen_1970 peptidase S9 prolyl oligopeptidase; dipeptidylaminopeptidase/acylaminoacyl- peptidase-like protein 1876351 8323883 Afer_1790 Acidimicrobium ferrooxidans DSM 10331 dipeptidylaminopeptidase/acylaminoacyl- peptidase-like protein YP_003110377.1 1874738 R 525909 CDS YP_003110378.1 256372554 8323884 complement(1876348..1878018) 1 NC_013124.1 KEGG: ace:Acel_0674 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase, large subunit 1878018 8323884 Afer_1791 Acidimicrobium ferrooxidans DSM 10331 methylmalonyl-CoA mutase, large subunit YP_003110378.1 1876348 R 525909 CDS YP_003110379.1 256372555 8323885 1878111..1879100 1 NC_013124.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 1879100 glpX 8323885 glpX Acidimicrobium ferrooxidans DSM 10331 fructose 1,6-bisphosphatase II YP_003110379.1 1878111 D 525909 CDS YP_003110380.1 256372556 8323886 complement(1879061..1879963) 1 NC_013124.1 PFAM: Phosphoesterase HXTX; KEGG: sco:SCO4840 secreted protein; phosphoesterase HXTX 1879963 8323886 Afer_1793 Acidimicrobium ferrooxidans DSM 10331 phosphoesterase HXTX YP_003110380.1 1879061 R 525909 CDS YP_003110381.1 256372557 8323887 complement(1879960..1880352) 1 NC_013124.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: cbe:Cbei_0419 ATP synthase F1, epsilon subunit; ATP synthase F1 subunit epsilon 1880352 8323887 Afer_1794 Acidimicrobium ferrooxidans DSM 10331 ATP synthase F1 subunit epsilon YP_003110381.1 1879960 R 525909 CDS YP_003110382.1 256372558 8323888 complement(1880355..1881770) 1 NC_013124.1 KEGG: fra:Francci3_3707 F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; ATP synthase F1 subunit beta 1881770 8323888 Afer_1795 Acidimicrobium ferrooxidans DSM 10331 ATP synthase F1 subunit beta YP_003110382.1 1880355 R 525909 CDS YP_003110383.1 256372559 8323889 complement(1881767..1882657) 1 NC_013124.1 TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: fre:Franean1_1023 ATP synthase F1, gamma subunit; ATP synthase F1 subunit gamma 1882657 8323889 Afer_1796 Acidimicrobium ferrooxidans DSM 10331 ATP synthase F1 subunit gamma YP_003110383.1 1881767 R 525909 CDS YP_003110384.1 256372560 8323890 complement(1882661..1884175) 1 NC_013124.1 KEGG: ace:Acel_0651 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha 1884175 8323890 Afer_1797 Acidimicrobium ferrooxidans DSM 10331 ATP synthase F1 subunit alpha YP_003110384.1 1882661 R 525909 CDS YP_003110385.1 256372561 8323891 complement(1884191..1885057) 1 NC_013124.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: pac:PPA1242 ATP synthase delta chain; ATP synthase F1 subunit delta 1885057 8323891 Afer_1798 Acidimicrobium ferrooxidans DSM 10331 ATP synthase F1 subunit delta YP_003110385.1 1884191 R 525909 CDS YP_003110386.1 256372562 8323892 complement(1885057..1885578) 1 NC_013124.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: cmi:CMM_1165 F0F1 ATP synthase subunit B; ATP synthase F0 subunit B 1885578 8323892 Afer_1799 Acidimicrobium ferrooxidans DSM 10331 ATP synthase F0 subunit B YP_003110386.1 1885057 R 525909 CDS YP_003110387.1 256372563 8323893 complement(1885583..1885858) 1 NC_013124.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: sgr:SGR_2168 ATP synthase C chain; ATP synthase F0 subunit C 1885858 8323893 Afer_1800 Acidimicrobium ferrooxidans DSM 10331 ATP synthase F0 subunit C YP_003110387.1 1885583 R 525909 CDS YP_003110388.1 256372564 8323894 complement(1885963..1886736) 1 NC_013124.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: fal:FRAAL5937 F0F1 ATP synthase subunit A; ATP synthase F0 subunit A 1886736 8323894 Afer_1801 Acidimicrobium ferrooxidans DSM 10331 ATP synthase F0 subunit A YP_003110388.1 1885963 R 525909 CDS YP_003110389.1 256372565 8323895 complement(1886733..1887149) 1 NC_013124.1 KEGG: pde:Pden_5097 inner-membrane translocator; inner-membrane translocator 1887149 8323895 Afer_1802 Acidimicrobium ferrooxidans DSM 10331 inner-membrane translocator YP_003110389.1 1886733 R 525909 CDS YP_003110390.1 256372566 8323896 complement(1887146..1887547) 1 NC_013124.1 hypothetical protein 1887547 8323896 Afer_1803 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110390.1 1887146 R 525909 CDS YP_003110391.1 256372567 8323897 complement(1887591..1888694) 1 NC_013124.1 PFAM: glycosyl transferase family 4; KEGG: kra:Krad_1261 glycosyl transferase family protein; glycosyl transferase family protein 1888694 8323897 Afer_1804 Acidimicrobium ferrooxidans DSM 10331 glycosyl transferase family protein YP_003110391.1 1887591 R 525909 CDS YP_003110392.1 256372568 8323898 complement(1888694..1889968) 1 NC_013124.1 PFAM: glycine hydroxymethyltransferase; Orn/Lys/Arg decarboxylase major region; aromatic amino acid beta- eliminating lyase/threonine aldolase; KEGG: afw:Anae109_2733 serine hydroxymethyltransferase; Glycine hydroxymethyltransferase 1889968 8323898 Afer_1805 Acidimicrobium ferrooxidans DSM 10331 Glycine hydroxymethyltransferase YP_003110392.1 1888694 R 525909 CDS YP_003110393.1 256372569 8323899 complement(1890015..1890692) 1 NC_013124.1 PFAM: SUA5/yciO/yrdC domain; KEGG: lpl:lp_2376 SUA5 family translation factor; SUA5/yciO/yrdC domain-containing protein 1890692 8323899 Afer_1806 Acidimicrobium ferrooxidans DSM 10331 SUA5/yciO/yrdC domain-containing protein YP_003110393.1 1890015 R 525909 CDS YP_003110394.1 256372570 8323900 complement(1890679..1891446) 1 NC_013124.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 12; RNA methylase; KEGG: gsu:GSU3103 HemK family modification methylase; modification methylase, HemK family 1891446 8323900 Afer_1807 Acidimicrobium ferrooxidans DSM 10331 modification methylase, HemK family YP_003110394.1 1890679 R 525909 CDS YP_003110395.1 256372571 8323901 complement(1891455..1892528) 1 NC_013124.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: ace:Acel_0641 peptide chain release factor 1; peptide chain release factor 1 1892528 8323901 Afer_1808 Acidimicrobium ferrooxidans DSM 10331 peptide chain release factor 1 YP_003110395.1 1891455 R 525909 CDS YP_003110396.1 256372572 8323902 complement(1892525..1893454) 1 NC_013124.1 hypothetical protein 1893454 8323902 Afer_1809 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110396.1 1892525 R 525909 CDS YP_003110397.1 256372573 8323903 complement(1893420..1893644) 1 NC_013124.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: ppd:Ppro_2650 50S ribosomal protein L31; 50S ribosomal protein L31 1893644 8323903 Afer_1810 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L31 YP_003110397.1 1893420 R 525909 CDS YP_003110398.1 256372574 8323904 complement(1893705..1895489) 1 NC_013124.1 KEGG: tfu:Tfu_2421 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA- binding; SMART: AAA ATPase; Cold shock protein; transcription termination factor Rho 1895489 8323904 Afer_1811 Acidimicrobium ferrooxidans DSM 10331 transcription termination factor Rho YP_003110398.1 1893705 R 525909 CDS YP_003110399.1 256372575 8323905 complement(1895539..1896609) 1 NC_013124.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: chy:CHY_1911 threonine synthase; threonine synthase 1896609 8323905 Afer_1812 Acidimicrobium ferrooxidans DSM 10331 threonine synthase YP_003110399.1 1895539 R 525909 CDS YP_003110400.1 256372576 8323906 complement(1896621..1897898) 1 NC_013124.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: fal:FRAAL5951 homoserine dehydrogenase; Homoserine dehydrogenase 1897898 8323906 Afer_1813 Acidimicrobium ferrooxidans DSM 10331 Homoserine dehydrogenase YP_003110400.1 1896621 R 525909 CDS YP_003110401.1 256372577 8323907 complement(1897895..1899175) 1 NC_013124.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: sco:SCO5353 diaminopimelate decarboxylase; diaminopimelate decarboxylase 1899175 8323907 Afer_1814 Acidimicrobium ferrooxidans DSM 10331 diaminopimelate decarboxylase YP_003110401.1 1897895 R 525909 CDS YP_003110402.1 256372578 8323908 complement(1899178..1900800) 1 NC_013124.1 KEGG: mva:Mvan_4350 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 1900800 8323908 Afer_1815 Acidimicrobium ferrooxidans DSM 10331 arginyl-tRNA synthetase YP_003110402.1 1899178 R 525909 CDS YP_003110403.1 256372579 8323910 complement(1901140..1902603) 1 NC_013124.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: hmo:HM1_2054 udp-N-acetylmuramoylalanyl-D- glutamate--2,6-diaminopimelate ligase; UDP-N-acetylmuramyl-tripeptide synthetase 1902603 8323910 Afer_1816 Acidimicrobium ferrooxidans DSM 10331 UDP-N-acetylmuramyl-tripeptide synthetase YP_003110403.1 1901140 R 525909 CDS YP_003110404.1 256372580 8323911 1902656..1903582 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_3100 glycosyl transferase family protein; family 2 glycosyl transferase 1903582 8323911 Afer_1817 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003110404.1 1902656 D 525909 CDS YP_003110405.1 256372581 8323912 complement(1903551..1904180) 1 NC_013124.1 PFAM: SNARE associated Golgi protein; KEGG: ace:Acel_0915 hypothetical protein; hypothetical protein 1904180 8323912 Afer_1818 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110405.1 1903551 R 525909 CDS YP_003110406.1 256372582 8323913 1904227..1904439 1 NC_013124.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ttj:TTHA0628 sec-independent protein translocase protein; twin-arginine translocation protein, TatA/E family subunit 1904439 8323913 Afer_1819 Acidimicrobium ferrooxidans DSM 10331 twin-arginine translocation protein, TatA/E family subunit YP_003110406.1 1904227 D 525909 CDS YP_003110407.1 256372583 8323914 1904908..1905825 1 NC_013124.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: art:Arth_0066 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase GroES domain-containing protein 1905825 8323914 Afer_1820 Acidimicrobium ferrooxidans DSM 10331 alcohol dehydrogenase GroES domain-containing protein YP_003110407.1 1904908 D 525909 CDS YP_003110408.1 256372584 8323915 1905822..1906700 1 NC_013124.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: saq:Sare_1353 ornithine cyclodeaminase/mu- crystallin; ornithine cyclodeaminase/mu-crystallin 1906700 8323915 Afer_1821 Acidimicrobium ferrooxidans DSM 10331 ornithine cyclodeaminase/mu-crystallin YP_003110408.1 1905822 D 525909 CDS YP_003110409.1 256372585 8323916 complement(1906975..1907403) 1 NC_013124.1 KEGG: fal:FRAAL5121 integral membrane protein; hypothetical protein 1907403 8323916 Afer_1822 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110409.1 1906975 R 525909 CDS YP_003110410.1 256372586 8323917 complement(1907393..1909084) 1 NC_013124.1 KEGG: ace:Acel_0490 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1909084 8323917 Afer_1823 Acidimicrobium ferrooxidans DSM 10331 cytochrome c oxidase subunit I YP_003110410.1 1907393 R 525909 CDS YP_003110411.1 256372587 8323918 complement(1909081..1909854) 1 NC_013124.1 PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; KEGG: fre:Franean1_1801 cytochrome c oxidase subunit II; cytochrome c oxidase subunit II 1909854 8323918 Afer_1824 Acidimicrobium ferrooxidans DSM 10331 cytochrome c oxidase subunit II YP_003110411.1 1909081 R 525909 CDS YP_003110412.1 256372588 8323919 complement(1909847..1911415) 1 NC_013124.1 PFAM: Cytochrome b/b6 domain; KEGG: fre:Franean1_1812 cytochrome b/b6 domain- containing protein; cytochrome b/b6 domain-containing protein 1911415 8323919 Afer_1825 Acidimicrobium ferrooxidans DSM 10331 cytochrome b/b6 domain-containing protein YP_003110412.1 1909847 R 525909 CDS YP_003110413.1 256372589 8323920 complement(1911412..1912314) 1 NC_013124.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: fal:FRAAL5110 ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein); Rieske (2Fe-2S) domain-containing protein 1912314 8323920 Afer_1826 Acidimicrobium ferrooxidans DSM 10331 Rieske (2Fe-2S) domain-containing protein YP_003110413.1 1911412 R 525909 CDS YP_003110414.1 256372590 8323921 complement(1912311..1913153) 1 NC_013124.1 PFAM: cytochrome c class I; KEGG: fre:Franean1_1810 cytochrome c class I; cytochrome c class I 1913153 8323921 Afer_1827 Acidimicrobium ferrooxidans DSM 10331 cytochrome c class I YP_003110414.1 1912311 R 525909 CDS YP_003110415.1 256372591 8323922 complement(1913172..1913768) 1 NC_013124.1 PFAM: cytochrome c oxidase subunit III; KEGG: mjl:Mjls_3302 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 1913768 8323922 Afer_1828 Acidimicrobium ferrooxidans DSM 10331 cytochrome c oxidase subunit III YP_003110415.1 1913172 R 525909 CDS YP_003110416.1 256372592 8323923 complement(1913796..1915916) 1 NC_013124.1 KEGG: sen:SACE_5730 ATP-dependent DNA helicase; ATP-dependent DNA helicase 1915916 8323923 Afer_1829 Acidimicrobium ferrooxidans DSM 10331 ATP-dependent DNA helicase YP_003110416.1 1913796 R 525909 CDS YP_003110417.1 256372593 8323924 1915955..1917025 1 NC_013124.1 KEGG: stp:Strop_1532 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 1917025 8323924 Afer_1830 Acidimicrobium ferrooxidans DSM 10331 uroporphyrinogen decarboxylase YP_003110417.1 1915955 D 525909 CDS YP_003110418.1 256372594 8323925 1917022..1918365 1 NC_013124.1 KEGG: ace:Acel_1381 UDP-galactopyranose mutase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase; protoporphyrinogen oxidase 1918365 8323925 Afer_1831 Acidimicrobium ferrooxidans DSM 10331 protoporphyrinogen oxidase YP_003110418.1 1917022 D 525909 CDS YP_003110419.1 256372595 8323926 complement(1918374..1919450) 1 NC_013124.1 KEGG: rxy:Rxyl_0647 nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazolep hosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 1919450 8323926 Afer_1832 Acidimicrobium ferrooxidans DSM 10331 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase YP_003110419.1 1918374 R 525909 CDS YP_003110420.1 256372596 8323927 complement(1919450..1919929) 1 NC_013124.1 KEGG: ace:Acel_0440 hypothetical protein; hypothetical protein 1919929 8323927 Afer_1833 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110420.1 1919450 R 525909 CDS YP_003110421.1 256372597 8323928 1920005..1920856 1 NC_013124.1 KEGG: sen:SACE_5719 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 1920856 8323928 Afer_1834 Acidimicrobium ferrooxidans DSM 10331 acyl-CoA thioesterase II YP_003110421.1 1920005 D 525909 CDS YP_003110422.1 256372598 8323929 complement(1920888..1922156) 1 NC_013124.1 KEGG: fre:Franean1_7227 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 1922156 8323929 Afer_1835 Acidimicrobium ferrooxidans DSM 10331 citrate synthase I YP_003110422.1 1920888 R 525909 CDS YP_003110423.1 256372599 8323930 complement(1922171..1922671) 1 NC_013124.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpt:Bpet3221 acetyltransferase; GCN5-like N-acetyltransferase 1922671 8323930 Afer_1836 Acidimicrobium ferrooxidans DSM 10331 GCN5-like N-acetyltransferase YP_003110423.1 1922171 R 525909 CDS YP_003110424.1 256372600 8323931 1922745..1923599 1 NC_013124.1 PFAM: protein of unknown function DUF75; KEGG: kra:Krad_1842 hypothetical protein; hypothetical protein 1923599 8323931 Afer_1837 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110424.1 1922745 D 525909 CDS YP_003110425.1 256372601 8323932 complement(1923586..1924278) 1 NC_013124.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_5418 hydrolase, NUDIX family; NUDIX hydrolase 1924278 8323932 Afer_1838 Acidimicrobium ferrooxidans DSM 10331 NUDIX hydrolase YP_003110425.1 1923586 R 525909 CDS YP_003110426.1 256372602 8323933 complement(1924651..1925070) 1 NC_013124.1 hypothetical protein 1925070 8323933 Afer_1839 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110426.1 1924651 R 525909 CDS YP_003110427.1 256372603 8323934 complement(1925076..1925315) 1 NC_013124.1 KEGG: tye:THEYE_A1680 ferredoxin; ferredoxin 1925315 8323934 Afer_1840 Acidimicrobium ferrooxidans DSM 10331 ferredoxin YP_003110427.1 1925076 R 525909 CDS YP_003110428.1 256372604 8323935 complement(1925273..1926070) 1 NC_013124.1 KEGG: scl:sce5850 hypothetical protein; hypothetical protein 1926070 8323935 Afer_1841 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110428.1 1925273 R 525909 CDS YP_003110429.1 256372605 8323936 complement(1926308..1927834) 1 NC_013124.1 PFAM: transposase IS4 family protein; KEGG: mva:Mvan_4071 transposase, IS4 family protein; transposase IS4 family protein 1927834 8323936 Afer_1842 Acidimicrobium ferrooxidans DSM 10331 transposase IS4 family protein YP_003110429.1 1926308 R 525909 CDS YP_003110430.1 256372606 8323937 complement(1927931..1928638) 1 NC_013124.1 PFAM: Chlorite dismutase; KEGG: ttj:TTHA1714 heme peroxidase; Chlorite dismutase 1928638 8323937 Afer_1843 Acidimicrobium ferrooxidans DSM 10331 Chlorite dismutase YP_003110430.1 1927931 R 525909 CDS YP_003110431.1 256372607 8323938 complement(1928635..1931037) 1 NC_013124.1 PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; KEGG: fre:Franean1_1258 ATPase central domain- containing protein; AAA ATPase central domain-containing protein 1931037 8323938 Afer_1844 Acidimicrobium ferrooxidans DSM 10331 AAA ATPase central domain-containing protein YP_003110431.1 1928635 R 525909 CDS YP_003110432.1 256372608 8323939 complement(1931034..1931711) 1 NC_013124.1 hypothetical protein 1931711 8323939 Afer_1845 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110432.1 1931034 R 525909 CDS YP_003110433.1 256372609 8323940 complement(1931994..1933616) 1 NC_013124.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: ace:Acel_0101 chaperonin GroEL; chaperonin GroEL 1933616 8323940 Afer_1846 Acidimicrobium ferrooxidans DSM 10331 chaperonin GroEL YP_003110433.1 1931994 R 525909 CDS YP_003110434.1 256372610 8323941 complement(1933741..1934031) 1 NC_013124.1 PFAM: thiamineS protein; KEGG: hya:HY04AAS1_0115 MoaD family protein; sulfur transfer protein ThiS 1934031 8323941 Afer_1847 Acidimicrobium ferrooxidans DSM 10331 sulfur transfer protein ThiS YP_003110434.1 1933741 R 525909 CDS YP_003110435.1 256372611 8323942 complement(1934052..1935296) 1 NC_013124.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gvi:gll2062 threonine synthase; threonine synthase 1935296 8323942 Afer_1848 Acidimicrobium ferrooxidans DSM 10331 threonine synthase YP_003110435.1 1934052 R 525909 CDS YP_003110436.1 256372612 8323943 1935485..1936831 1 NC_013124.1 PFAM: glycosyl transferase family 20; KEGG: sco:SCO4290 trehalose-phosphate synthase; glycosyl transferase family protein 1936831 8323943 Afer_1849 Acidimicrobium ferrooxidans DSM 10331 glycosyl transferase family protein YP_003110436.1 1935485 D 525909 CDS YP_003110437.1 256372613 8323944 1936828..1937631 1 NC_013124.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase; PFAM: trehalose-phosphatase; KEGG: saq:Sare_0810 HAD family hydrolase; HAD-superfamily hydrolase 1937631 8323944 Afer_1850 Acidimicrobium ferrooxidans DSM 10331 HAD-superfamily hydrolase YP_003110437.1 1936828 D 525909 CDS YP_003110438.1 256372614 8323945 1937663..1938151 1 NC_013124.1 PFAM: regulatory protein TetR; KEGG: msm:MSMEG_5282 transcriptional regulator; TetR family transcriptional regulator 1938151 8323945 Afer_1851 Acidimicrobium ferrooxidans DSM 10331 TetR family transcriptional regulator YP_003110438.1 1937663 D 525909 CDS YP_003110439.1 256372615 8323946 complement(1938101..1938688) 1 NC_013124.1 KEGG: mmr:Mmar10_2710 molybdenum cofactor guanylyltransferase; hypothetical protein 1938688 8323946 Afer_1852 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110439.1 1938101 R 525909 CDS YP_003110440.1 256372616 8323947 1938706..1939713 1 NC_013124.1 KEGG: fre:Franean1_3201 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 1939713 8323947 Afer_1853 Acidimicrobium ferrooxidans DSM 10331 molybdenum cofactor biosynthesis protein A YP_003110440.1 1938706 D 525909 CDS YP_003110441.1 256372617 8323948 1939775..1940266 1 NC_013124.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: hmo:HM1_0063 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 1940266 8323948 Afer_1854 Acidimicrobium ferrooxidans DSM 10331 molybdenum cofactor biosynthesis protein C YP_003110441.1 1939775 D 525909 CDS YP_003110442.1 256372618 8323949 1940263..1940676 1 NC_013124.1 KEGG: lfe:LAF_1457 hypothetical protein; hypothetical protein 1940676 8323949 Afer_1855 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110442.1 1940263 D 525909 CDS YP_003110443.1 256372619 8323951 complement(1941560..1941973) 1 NC_013124.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: stp:Strop_0126 regulatory protein, ArsR; ArsR family transcriptional regulator 1941973 8323951 Afer_1856 Acidimicrobium ferrooxidans DSM 10331 ArsR family transcriptional regulator YP_003110443.1 1941560 R 525909 CDS YP_003110444.1 256372620 8323952 1942381..1943697 1 NC_013124.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rpa:RPA2258 arsenical pump membrane protein; Arsenical pump membrane protein 1943697 8323952 Afer_1857 Acidimicrobium ferrooxidans DSM 10331 Arsenical pump membrane protein YP_003110444.1 1942381 D 525909 CDS YP_003110445.1 256372621 8323953 1943911..1945311 1 NC_013124.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: mab:MAB_4865 pyridine nucleotide- disulphide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase dimerization subunit 1945311 8323953 Afer_1858 Acidimicrobium ferrooxidans DSM 10331 pyridine nucleotide-disulfide oxidoreductase dimerization subunit YP_003110445.1 1943911 D 525909 CDS YP_003110446.1 256372622 8323954 1945777..1947426 1 NC_013124.1 TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: fal:FRAAL0800 thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 1947426 8323954 Afer_1859 Acidimicrobium ferrooxidans DSM 10331 thiamine biosynthesis protein ThiC YP_003110446.1 1945777 D 525909 CDS YP_003110447.1 256372623 8323955 1947801..1948745 1 NC_013124.1 KEGG: dau:Daud_1971 hypothetical protein; hypothetical protein 1948745 8323955 Afer_1860 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110447.1 1947801 D 525909 CDS YP_003110448.1 256372624 8323956 1949088..1949360 1 NC_013124.1 KEGG: saq:Sare_2580 integrase catalytic region; hypothetical protein 1949360 8323956 Afer_1861 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110448.1 1949088 D 525909 CDS YP_003110449.1 256372625 8323958 complement(1950258..1950578) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1950578 8323958 Afer_1863 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003110449.1 1950258 R 525909 CDS YP_003110450.1 256372626 8323959 complement(1950701..1951513) 1 NC_013124.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: chy:CHY_1116 ISChy4, transposition helper protein; IstB domain-containing protein ATP-binding protein 1951513 8323959 Afer_1864 Acidimicrobium ferrooxidans DSM 10331 IstB domain-containing protein ATP-binding protein YP_003110450.1 1950701 R 525909 CDS YP_003110451.1 256372627 8323960 complement(1951506..1952747) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: chy:CHY_1117 ISChy4, transposase; integrase catalytic subunit 1952747 8323960 Afer_1865 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003110451.1 1951506 R 525909 CDS YP_003110452.1 256372628 8323961 complement(1952844..1953452) 1 NC_013124.1 PFAM: restriction endonuclease XhoI; KEGG: mbn:Mboo_2338 type II site-specific deoxyribonuclease; Type II site-specific deoxyribonuclease 1953452 8323961 Afer_1866 Acidimicrobium ferrooxidans DSM 10331 Type II site-specific deoxyribonuclease YP_003110452.1 1952844 R 525909 CDS YP_003110453.1 256372629 8323963 1954517..1954951 1 NC_013124.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: mta:Moth_2333 hypothetical protein; PilT protein domain-containing protein 1954951 8323963 Afer_1868 Acidimicrobium ferrooxidans DSM 10331 PilT protein domain-containing protein YP_003110453.1 1954517 D 525909 CDS YP_003110454.1 256372630 8323964 complement(1955006..1955395) 1 NC_013124.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dth:DICTH_1248 single-strand DNA-binding protein; single-strand binding protein 1955395 8323964 Afer_1869 Acidimicrobium ferrooxidans DSM 10331 single-strand binding protein YP_003110454.1 1955006 R 525909 CDS YP_003110455.1 256372631 8323967 complement(1956309..1959158) 1 NC_013124.1 PFAM: protein of unknown function UPF0182; KEGG: pth:PTH_1387 hypothetical protein; hypothetical protein 1959158 8323967 Afer_1871 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110455.1 1956309 R 525909 CDS YP_003110456.1 256372632 8323968 complement(1959171..1961621) 1 NC_013124.1 KEGG: sco:SCO5397 large Ala/Glu-rich protein; hypothetical protein 1961621 8323968 Afer_1872 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110456.1 1959171 R 525909 CDS YP_003110457.1 256372633 8323969 complement(1961630..1962652) 1 NC_013124.1 KEGG: sen:SACE_1100 PDZ/DHR/GLGF; hypothetical protein 1962652 8323969 Afer_1873 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110457.1 1961630 R 525909 CDS YP_003110458.1 256372634 8323970 1962731..1963396 1 NC_013124.1 PFAM: class II aldolase/adducin family protein; KEGG: sth:STH188 sugar isomerase; class II aldolase/adducin family protein 1963396 8323970 Afer_1874 Acidimicrobium ferrooxidans DSM 10331 class II aldolase/adducin family protein YP_003110458.1 1962731 D 525909 CDS YP_003110459.1 256372635 8323971 1963393..1963788 1 NC_013124.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mmw:Mmwyl1_1812 alkylhydroperoxidase; carboxymuconolactone decarboxylase 1963788 8323971 Afer_1875 Acidimicrobium ferrooxidans DSM 10331 carboxymuconolactone decarboxylase YP_003110459.1 1963393 D 525909 CDS YP_003110460.1 256372636 8323972 1963763..1964218 1 NC_013124.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sen:SACE_7045 MarR family transcriptional regulator; MarR family transcriptional regulator 1964218 8323972 Afer_1876 Acidimicrobium ferrooxidans DSM 10331 MarR family transcriptional regulator YP_003110460.1 1963763 D 525909 CDS YP_003110461.1 256372637 8323973 1964295..1964624 1 NC_013124.1 hypothetical protein 1964624 8323973 Afer_1877 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110461.1 1964295 D 525909 CDS YP_003110462.1 256372638 8323974 complement(1964621..1965442) 1 NC_013124.1 PFAM: ABC-2 type transporter; KEGG: fra:Francci3_1473 hypothetical protein; ABC-2 type transporter 1965442 8323974 Afer_1878 Acidimicrobium ferrooxidans DSM 10331 ABC-2 type transporter YP_003110462.1 1964621 R 525909 CDS YP_003110463.1 256372639 8323975 complement(1965439..1966389) 1 NC_013124.1 KEGG: ace:Acel_0339 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; daunorubicin resistance ABC transporter ATPase subunit 1966389 8323975 Afer_1879 Acidimicrobium ferrooxidans DSM 10331 daunorubicin resistance ABC transporter ATPase subunit YP_003110463.1 1965439 R 525909 CDS YP_003110464.1 256372640 8323976 complement(1966429..1967418) 1 NC_013124.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 1967418 8323976 Afer_1880 Acidimicrobium ferrooxidans DSM 10331 malate dehydrogenase YP_003110464.1 1966429 R 525909 CDS YP_003110465.1 256372641 8323977 complement(1967432..1968655) 1 NC_013124.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: afl:Aflv_0505 isocitrate dehydrogenase; isocitrate dehydrogenase, NADP-dependent 1968655 8323977 Afer_1881 Acidimicrobium ferrooxidans DSM 10331 isocitrate dehydrogenase, NADP-dependent YP_003110465.1 1967432 R 525909 CDS YP_003110466.1 256372642 8323978 complement(1968692..1969870) 1 NC_013124.1 KEGG: ace:Acel_0470 hypothetical protein; hypothetical protein 1969870 8323978 Afer_1882 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110466.1 1968692 R 525909 CDS YP_003110467.1 256372643 8323979 1969965..1970663 1 NC_013124.1 KEGG: mul:MUL_2524 lipase LipV; hypothetical protein 1970663 8323979 Afer_1883 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110467.1 1969965 D 525909 CDS YP_003110468.1 256372644 8323980 1970820..1971314 1 NC_013124.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mem:Memar_1334 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE protein 1971314 8323980 Afer_1884 Acidimicrobium ferrooxidans DSM 10331 molybdopterin biosynthesis MoaE protein YP_003110468.1 1970820 D 525909 CDS YP_003110469.1 256372645 8323981 1971311..1971517 1 NC_013124.1 hypothetical protein 1971517 8323981 Afer_1885 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110469.1 1971311 D 525909 CDS YP_003110470.1 256372646 8323982 1971514..1972494 1 NC_013124.1 KEGG: cbf:CLI_0218 mbl protein; actin-like ATPase 1972494 8323982 Afer_1886 Acidimicrobium ferrooxidans DSM 10331 actin-like ATPase YP_003110470.1 1971514 D 525909 CDS YP_003110471.1 256372647 8323983 1972948..1974684 1 NC_013124.1 KEGG: cbe:Cbei_2588 collagen triple helix repeat; hypothetical protein 1974684 8323983 Afer_1887 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110471.1 1972948 D 525909 CDS YP_003110472.1 256372648 8323984 1974821..1976602 1 NC_013124.1 KEGG: art:Arth_4271 hypothetical protein; hypothetical protein 1976602 8323984 Afer_1888 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110472.1 1974821 D 525909 CDS YP_003110473.1 256372649 8323990 complement(1979904..1980224) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1980224 8323990 Afer_1894 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003110473.1 1979904 R 525909 CDS YP_003110474.1 256372650 8323992 complement(1982271..1982924) 1 NC_013124.1 PFAM: PBS lyase HEAT domain protein repeat- containing protein; KEGG: rrs:RoseRS_1736 heat repeat-containing PBS lyase; PBS lyase HEAT domain-containing protein repeat-containing protein 1982924 8323992 Afer_1896 Acidimicrobium ferrooxidans DSM 10331 PBS lyase HEAT domain-containing protein repeat-containing protein YP_003110474.1 1982271 R 525909 CDS YP_003110475.1 256372651 8323993 complement(1982969..1984483) 1 NC_013124.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: rha:RHA1_ro01635 permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease 1984483 8323993 Afer_1897 Acidimicrobium ferrooxidans DSM 10331 cytosine/purines uracil thiamine allantoin permease YP_003110475.1 1982969 R 525909 CDS YP_003110476.1 256372652 8323994 complement(1984538..1986109) 1 NC_013124.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pmy:Pmen_4599 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 1986109 8323994 Afer_1898 Acidimicrobium ferrooxidans DSM 10331 nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003110476.1 1984538 R 525909 CDS YP_003110477.1 256372653 8323995 complement(1986121..1986876) 1 NC_013124.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gur:Gura_2796 RNA methyltransferase; TrmH family RNA methyltransferase 1986876 8323995 Afer_1899 Acidimicrobium ferrooxidans DSM 10331 TrmH family RNA methyltransferase YP_003110477.1 1986121 R 525909 CDS YP_003110478.1 256372654 8323996 complement(1986863..1987957) 1 NC_013124.1 KEGG: lxx:Lxx18250 2-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl- D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1987957 8323996 Afer_1900 Acidimicrobium ferrooxidans DSM 10331 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_003110478.1 1986863 R 525909 CDS YP_003110479.1 256372655 8323997 complement(1987964..1988443) 1 NC_013124.1 PFAM: transcription factor CarD; KEGG: mjl:Mjls_5126 CarD family transcriptional regulator; CarD family transcriptional regulator 1988443 8323997 Afer_1901 Acidimicrobium ferrooxidans DSM 10331 CarD family transcriptional regulator YP_003110479.1 1987964 R 525909 CDS YP_003110480.1 256372656 8323998 complement(1988541..1989611) 1 NC_013124.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA 1989611 8323998 Afer_1902 Acidimicrobium ferrooxidans DSM 10331 DNA integrity scanning protein DisA YP_003110480.1 1988541 R 525909 CDS YP_003110481.1 256372657 8323999 complement(1989702..1992191) 1 NC_013124.1 PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: fal:FRAAL6680 ATP-dependent protease, HSP 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE; ATPase AAA-2 domain-containing protein 1992191 8323999 Afer_1903 Acidimicrobium ferrooxidans DSM 10331 ATPase AAA-2 domain-containing protein YP_003110481.1 1989702 R 525909 CDS YP_003110482.1 256372658 8324000 complement(1992408..1994294) 1 NC_013124.1 KEGG: fre:Franean1_6445 hypothetical protein; hypothetical protein 1994294 8324000 Afer_1904 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110482.1 1992408 R 525909 CDS YP_003110483.1 256372659 8324001 1994391..1995407 1 NC_013124.1 PFAM: Polyprenyl synthetase; KEGG: sma:SAV_4864 polyprenyl diphosphate synthase; polyprenyl synthetase 1995407 8324001 Afer_1905 Acidimicrobium ferrooxidans DSM 10331 polyprenyl synthetase YP_003110483.1 1994391 D 525909 CDS YP_003110484.1 256372660 8324002 complement(1995658..1997154) 1 NC_013124.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type; KEGG: cya:CYA_0333 lysyl-tRNA synthetase; lysyl-tRNA synthetase 1997154 8324002 Afer_1906 Acidimicrobium ferrooxidans DSM 10331 lysyl-tRNA synthetase YP_003110484.1 1995658 R 525909 CDS YP_003110485.1 256372661 8324003 complement(1997194..1998006) 1 NC_013124.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: mta:Moth_0146 pantothenate kinase; transcriptional acitvator, Baf family 1998006 8324003 Afer_1907 Acidimicrobium ferrooxidans DSM 10331 transcriptional acitvator, Baf family YP_003110485.1 1997194 R 525909 CDS YP_003110486.1 256372662 8324004 complement(1997999..1998844) 1 NC_013124.1 KEGG: rsh:Rsph17029_0403 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantoate/beta-alanine ligase 1998844 8324004 Afer_1908 Acidimicrobium ferrooxidans DSM 10331 pantoate/beta-alanine ligase YP_003110486.1 1997999 R 525909 CDS YP_003110487.1 256372663 8324005 complement(1998832..1999317) 1 NC_013124.1 TIGRFAM:2-amino-4-hydroxy-6- hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK; KEGG: dra:DR_0170 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1999317 8324005 Afer_1909 Acidimicrobium ferrooxidans DSM 10331 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_003110487.1 1998832 R 525909 CDS YP_003110488.1 256372664 8324006 complement(1999314..1999691) 1 NC_013124.1 PFAM: dihydroneopterin aldolase; KEGG: rxy:Rxyl_2579 dihydroneopterin aldolase; dihydroneopterin aldolase 1999691 8324006 Afer_1910 Acidimicrobium ferrooxidans DSM 10331 dihydroneopterin aldolase YP_003110488.1 1999314 R 525909 CDS YP_003110489.1 256372665 8324007 complement(1999682..2000488) 1 NC_013124.1 KEGG: mmr:Mmar10_2410 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 2000488 8324007 Afer_1911 Acidimicrobium ferrooxidans DSM 10331 dihydropteroate synthase YP_003110489.1 1999682 R 525909 CDS YP_003110490.1 256372666 8324008 complement(2000485..2001057) 1 NC_013124.1 PFAM: GTP cyclohydrolase I; KEGG: paa:Paes_0859 GTP cyclohydrolase I; GTP cyclohydrolase I 2001057 8324008 Afer_1912 Acidimicrobium ferrooxidans DSM 10331 GTP cyclohydrolase I YP_003110490.1 2000485 R 525909 CDS YP_003110491.1 256372667 8324009 complement(2001054..2001599) 1 NC_013124.1 KEGG: fre:Franean1_0299 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 2001599 8324009 Afer_1913 Acidimicrobium ferrooxidans DSM 10331 hypoxanthine phosphoribosyltransferase YP_003110491.1 2001054 R 525909 CDS YP_003110492.1 256372668 8324010 complement(2001596..2002516) 1 NC_013124.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: nfa:nfa3880 hypothetical protein; tRNA(Ile)-lysidine synthetase 2002516 8324010 Afer_1914 Acidimicrobium ferrooxidans DSM 10331 tRNA(Ile)-lysidine synthetase YP_003110492.1 2001596 R 525909 CDS YP_003110493.1 256372669 8324011 complement(2002506..2003483) 1 NC_013124.1 KEGG: kra:Krad_0528 hypothetical protein; hypothetical protein 2003483 8324011 Afer_1915 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110493.1 2002506 R 525909 CDS YP_003110494.1 256372670 8324012 complement(2003503..2003700) 1 NC_013124.1 hypothetical protein 2003700 8324012 Afer_1916 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110494.1 2003503 R 525909 CDS YP_003110495.1 256372671 8324013 complement(2003730..2004062) 1 NC_013124.1 TIGRFAM: anti-sigma factor; KEGG: saq:Sare_4094 anti-sigma factor RshA; anti-sigma factor 2004062 8324013 Afer_1917 Acidimicrobium ferrooxidans DSM 10331 anti-sigma factor YP_003110495.1 2003730 R 525909 CDS YP_003110496.1 256372672 8324014 complement(2004063..2004638) 1 NC_013124.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: ace:Acel_0538 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 2004638 8324014 Afer_1918 Acidimicrobium ferrooxidans DSM 10331 ECF subfamily RNA polymerase sigma-24 subunit YP_003110496.1 2004063 R 525909 CDS YP_003110497.1 256372673 8324017 complement(2005603..2006187) 1 NC_013124.1 KEGG: xau:Xaut_4325 dTMP kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 2006187 8324017 Afer_1920 Acidimicrobium ferrooxidans DSM 10331 thymidylate kinase YP_003110497.1 2005603 R 525909 CDS YP_003110498.1 256372674 8324018 complement(2006202..2008754) 1 NC_013124.1 KEGG: fra:Francci3_4305 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase I 2008754 8324018 Afer_1921 Acidimicrobium ferrooxidans DSM 10331 DNA topoisomerase I YP_003110498.1 2006202 R 525909 CDS YP_003110499.1 256372675 8324019 complement(2008773..2011106) 1 NC_013124.1 PFAM: nucleic acid binding OB-fold tRNA/helicase- type; amino acid permease-associated region; KEGG: ace:Acel_1194 nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 2011106 8324019 Afer_1922 Acidimicrobium ferrooxidans DSM 10331 OB-fold tRNA/helicase-type nucleic acid binding protein YP_003110499.1 2008773 R 525909 CDS YP_003110500.1 256372676 8324020 2011277..2011939 1 NC_013124.1 PFAM: TrkA-N domain protein; KEGG: sgr:SGR_1656 potassium transporter; TrkA-N domain-containing protein 2011939 8324020 Afer_1923 Acidimicrobium ferrooxidans DSM 10331 TrkA-N domain-containing protein YP_003110500.1 2011277 D 525909 CDS YP_003110501.1 256372677 8324021 2011944..2012639 1 NC_013124.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: fre:Franean1_5192 TrkA domain-containing protein; TrkA-N domain-containing protein 2012639 8324021 Afer_1924 Acidimicrobium ferrooxidans DSM 10331 TrkA-N domain-containing protein YP_003110501.1 2011944 D 525909 CDS YP_003110502.1 256372678 8324022 2012691..2013512 1 NC_013124.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: stp:Strop_4041 HAD family hydrolase; HAD-superfamily hydrolase 2013512 8324022 Afer_1925 Acidimicrobium ferrooxidans DSM 10331 HAD-superfamily hydrolase YP_003110502.1 2012691 D 525909 CDS YP_003110503.1 256372679 8324023 2013946..2015577 1 NC_013124.1 KEGG: sma:SAV_74 hypothetical protein; hypothetical protein 2015577 8324023 Afer_1926 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110503.1 2013946 D 525909 CDS YP_003110504.1 256372680 8324024 complement(2016887..2017720) 1 NC_013124.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: msm:MSMEG_2639 integral membrane protein; hypothetical protein 2017720 8324024 Afer_1927 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110504.1 2016887 R 525909 CDS YP_003110505.1 256372681 8324025 2017783..2018580 1 NC_013124.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: nfa:nfa43360 hypothetical protein; Extradiol ring-cleavage dioxygenase class III protein subunit B 2018580 8324025 Afer_1928 Acidimicrobium ferrooxidans DSM 10331 Extradiol ring-cleavage dioxygenase class III protein subunit B YP_003110505.1 2017783 D 525909 CDS YP_003110506.1 256372682 8324026 2018698..2020341 1 NC_013124.1 KEGG: aba:Acid345_0662 parallel beta-helix repeat protein; hypothetical protein 2020341 8324026 Afer_1929 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110506.1 2018698 D 525909 CDS YP_003110507.1 256372683 8324027 complement(2020457..2020957) 1 NC_013124.1 KEGG: rrs:RoseRS_3572 hypothetical protein; hypothetical protein 2020957 8324027 Afer_1930 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110507.1 2020457 R 525909 CDS YP_003110508.1 256372684 8324028 complement(2021012..2022070) 1 NC_013124.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: scl:sce1136 regulator of molybdate uptake; transcriptional regulator of molybdate metabolism, XRE family 2022070 8324028 Afer_1931 Acidimicrobium ferrooxidans DSM 10331 transcriptional regulator of molybdate metabolism, XRE family YP_003110508.1 2021012 R 525909 CDS YP_003110509.1 256372685 8324029 complement(2022067..2023005) 1 NC_013124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cms:CMS_2522 ABC transporter ATP- binding subunit; ABC transporter-like protein 2023005 8324029 Afer_1932 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003110509.1 2022067 R 525909 CDS YP_003110510.1 256372686 8324030 complement(2022992..2023810) 1 NC_013124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_7295 tungstate/molybdate transport system permease protein; binding-protein-dependent transport systems inner membrane component 2023810 8324030 Afer_1933 Acidimicrobium ferrooxidans DSM 10331 binding-protein-dependent transport systems inner membrane component YP_003110510.1 2022992 R 525909 CDS YP_003110511.1 256372687 8324031 complement(2023773..2024726) 1 NC_013124.1 KEGG: bvi:Bcep1808_7294 tungstate/molybdate binding protein; tungstate/molybdate binding protein 2024726 8324031 Afer_1934 Acidimicrobium ferrooxidans DSM 10331 tungstate/molybdate binding protein YP_003110511.1 2023773 R 525909 CDS YP_003110512.1 256372688 8324032 2024874..2026025 1 NC_013124.1 PFAM: aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sgr:SGR_3424 aminotransferase; class I and II aminotransferase 2026025 8324032 Afer_1935 Acidimicrobium ferrooxidans DSM 10331 class I and II aminotransferase YP_003110512.1 2024874 D 525909 CDS YP_003110513.1 256372689 8324033 complement(2026080..2026679) 1 NC_013124.1 PFAM: Methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; Methyltransferase type 12; KEGG: ace:Acel_0489 methyltransferase type 12; type 11 methyltransferase 2026679 8324033 Afer_1936 Acidimicrobium ferrooxidans DSM 10331 type 11 methyltransferase YP_003110513.1 2026080 R 525909 CDS YP_003110514.1 256372690 8324034 2026747..2027874 1 NC_013124.1 PFAM: metallophosphoesterase; KEGG: mbo:Mb1308 hypothetical protein; metallophosphoesterase 2027874 8324034 Afer_1937 Acidimicrobium ferrooxidans DSM 10331 metallophosphoesterase YP_003110514.1 2026747 D 525909 CDS YP_003110515.1 256372691 8324035 2027871..2030711 1 NC_013124.1 PFAM: SMC domain protein; KEGG: mab:MAB_1421 hypothetical protein; SMC domain-containing protein 2030711 8324035 Afer_1938 Acidimicrobium ferrooxidans DSM 10331 SMC domain-containing protein YP_003110515.1 2027871 D 525909 CDS YP_003110516.1 256372692 8324036 complement(2031298..2032554) 1 NC_013124.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_0861 NAD-dependent epimerase/dehydratase; UDP-sulfoquinovose synthase 2032554 8324036 Afer_1939 Acidimicrobium ferrooxidans DSM 10331 UDP-sulfoquinovose synthase YP_003110516.1 2031298 R 525909 CDS YP_003110517.1 256372693 8324037 2032804..2033913 1 NC_013124.1 KEGG: ace:Acel_2052 cysteinyl-tRNA synthetase-like; cysteinyl-tRNA synthetase-like protein 2033913 8324037 Afer_1940 Acidimicrobium ferrooxidans DSM 10331 cysteinyl-tRNA synthetase-like protein YP_003110517.1 2032804 D 525909 CDS YP_003110518.1 256372694 8324039 2034719..2035588 1 NC_013124.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: chy:CHY_2227 phosphotransferase domain- containing protein; PHP domain-containing protein 2035588 8324039 Afer_1941 Acidimicrobium ferrooxidans DSM 10331 PHP domain-containing protein YP_003110518.1 2034719 D 525909 CDS YP_003110519.1 256372695 8324042 2036028..2037464 1 NC_013124.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: fal:FRAAL0128 amidophosphoribosyltransferase; amidophosphoribosyltransferase 2037464 8324042 Afer_1942 Acidimicrobium ferrooxidans DSM 10331 amidophosphoribosyltransferase YP_003110519.1 2036028 D 525909 CDS YP_003110520.1 256372696 8324043 2037552..2038580 1 NC_013124.1 KEGG: aeh:Mlg_0516 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine cyclo-ligase 2038580 8324043 Afer_1943 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylformylglycinamidine cyclo-ligase YP_003110520.1 2037552 D 525909 CDS YP_003110521.1 256372697 8324044 2038556..2039116 1 NC_013124.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: cms:CMS_0233 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 2039116 8324044 Afer_1944 Acidimicrobium ferrooxidans DSM 10331 orotate phosphoribosyltransferase YP_003110521.1 2038556 D 525909 CDS YP_003110522.1 256372698 8324045 2039162..2040082 1 NC_013124.1 KEGG: spw:SPCG_1750 cell wall surface anchor family protein; hypothetical protein 2040082 8324045 Afer_1945 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110522.1 2039162 D 525909 CDS YP_003110523.1 256372699 8324046 complement(2040357..2041364) 1 NC_013124.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 2041364 8324046 Afer_1946 Acidimicrobium ferrooxidans DSM 10331 type IV pilus assembly PilZ YP_003110523.1 2040357 R 525909 CDS YP_003110524.1 256372700 8324047 complement(2041370..2042782) 1 NC_013124.1 PFAM: malic protein NAD-binding; amino acid-binding ACT domain protein; malic protein domain protein; UBA/THIF- type NAD/FAD binding protein; KEGG: rxy:Rxyl_1110 malate dehydrogenase (oxaloacetate decarboxylating); Malate dehydrogenase 2042782 8324047 Afer_1947 Acidimicrobium ferrooxidans DSM 10331 Malate dehydrogenase YP_003110524.1 2041370 R 525909 CDS YP_003110525.1 256372701 8324048 2042827..2044137 1 NC_013124.1 KEGG: fal:FRAAL1199 phosphomannomutase; hypothetical protein 2044137 8324048 Afer_1948 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110525.1 2042827 D 525909 CDS YP_003110526.1 256372702 8324049 2044208..2046046 1 NC_013124.1 PFAM: General secretory system II protein E domain protein; glycosyl transferase family 2; KEGG: ttj:TTHA0743 glycosyltransferase related protein; General secretory system II protein E domain-containing protein 2046046 8324049 Afer_1949 Acidimicrobium ferrooxidans DSM 10331 General secretory system II protein E domain-containing protein YP_003110526.1 2044208 D 525909 CDS YP_003110527.1 256372703 8324050 2046043..2046963 1 NC_013124.1 KEGG: ret:RHE_CH02708 hypothetical protein; hypothetical protein 2046963 8324050 Afer_1950 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110527.1 2046043 D 525909 CDS YP_003110528.1 256372704 8324051 complement(2046960..2047391) 1 NC_013124.1 hypothetical protein 2047391 8324051 Afer_1951 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110528.1 2046960 R 525909 CDS YP_003110529.1 256372705 8324052 2047971..2050175 1 NC_013124.1 KEGG: mta:Moth_2048 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase II 2050175 8324052 Afer_1952 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylformylglycinamidine synthase II YP_003110529.1 2047971 D 525909 CDS YP_003110530.1 256372706 8324053 complement(2050172..2050825) 1 NC_013124.1 KEGG: rxy:Rxyl_0995 phosphoribosylformylglycinamidine synthase subunit I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; phosphoribosylformylglycinamidine synthase I 2050825 8324053 Afer_1953 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylformylglycinamidine synthase I YP_003110530.1 2050172 R 525909 CDS YP_003110531.1 256372707 8324054 complement(2050822..2051091) 1 NC_013124.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; KEGG: syg:sync_1700 phosphoribosylformylglycinamidine synthase, PurS protein; phosphoribosylformylglycinamidine synthase PurS 2051091 8324054 Afer_1954 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylformylglycinamidine synthase PurS YP_003110531.1 2050822 R 525909 CDS YP_003110532.1 256372708 8324055 complement(2051088..2051966) 1 NC_013124.1 PFAM: SAICAR synthetase; KEGG: mva:Mvan_5138 phosphoribosylaminoimidazole- succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 2051966 8324055 Afer_1955 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_003110532.1 2051088 R 525909 CDS YP_003110533.1 256372709 8324056 complement(2051963..2053267) 1 NC_013124.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: tth:TTC1149 adenylosuccinate lyase protein; adenylosuccinate lyase 2053267 8324056 Afer_1956 Acidimicrobium ferrooxidans DSM 10331 adenylosuccinate lyase YP_003110533.1 2051963 R 525909 CDS YP_003110534.1 256372710 8324057 complement(2053365..2054591) 1 NC_013124.1 KEGG: fra:Francci3_4370 phosphoribosylamine-- glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; ATP- dependent carboxylate-amine ligase domain protein ATP- grasp; phosphoribosylamine/glycine ligase 2054591 8324057 Afer_1957 Acidimicrobium ferrooxidans DSM 10331 phosphoribosylamine/glycine ligase YP_003110534.1 2053365 R 525909 CDS YP_003110535.1 256372711 8324058 complement(2054597..2055874) 1 NC_013124.1 KEGG: fal:FRAAL6660 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase; adenylosuccinate synthetase 2055874 8324058 Afer_1958 Acidimicrobium ferrooxidans DSM 10331 adenylosuccinate synthetase YP_003110535.1 2054597 R 525909 CDS YP_003110536.1 256372712 8324059 complement(2055907..2056560) 1 NC_013124.1 KEGG: cur:cur_0215 phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1 family 2056560 8324059 Afer_1959 Acidimicrobium ferrooxidans DSM 10331 phosphoglycerate mutase 1 family YP_003110536.1 2055907 R 525909 CDS YP_003110537.1 256372713 8324060 2056798..2058639 1 NC_013124.1 KEGG: ace:Acel_2115 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 2058639 8324060 Afer_1960 Acidimicrobium ferrooxidans DSM 10331 chaperone protein DnaK YP_003110537.1 2056798 D 525909 CDS YP_003110538.1 256372714 8324061 2058643..2059260 1 NC_013124.1 PFAM: GrpE protein; KEGG: ace:Acel_2116 GrpE protein; GrpE protein 2059260 8324061 Afer_1961 Acidimicrobium ferrooxidans DSM 10331 GrpE protein YP_003110538.1 2058643 D 525909 CDS YP_003110539.1 256372715 8324062 2059315..2060400 1 NC_013124.1 KEGG: ace:Acel_2117 chaperone protein DnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ 2060400 8324062 Afer_1962 Acidimicrobium ferrooxidans DSM 10331 chaperone protein DnaJ YP_003110539.1 2059315 D 525909 CDS YP_003110540.1 256372716 8324063 2060429..2060845 1 NC_013124.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sen:SACE_7207 heat shock regulator; MerR family transcriptional regulator 2060845 8324063 Afer_1963 Acidimicrobium ferrooxidans DSM 10331 MerR family transcriptional regulator YP_003110540.1 2060429 D 525909 CDS YP_003110541.1 256372717 8324064 2060927..2063413 1 NC_013124.1 KEGG: nfa:nfa54020 Clp protease ATP- binding subunit; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 2063413 8324064 Afer_1964 Acidimicrobium ferrooxidans DSM 10331 ATP-dependent chaperone ClpB YP_003110541.1 2060927 D 525909 CDS YP_003110542.1 256372718 8324065 complement(2063460..2064635) 1 NC_013124.1 PFAM: amidohydrolase 2; KEGG: sen:SACE_3096 amidohydrolase 2; amidohydrolase 2 2064635 8324065 Afer_1965 Acidimicrobium ferrooxidans DSM 10331 amidohydrolase 2 YP_003110542.1 2063460 R 525909 CDS YP_003110543.1 256372719 8324066 complement(2064632..2065471) 1 NC_013124.1 PFAM: sugar isomerase (SIS); KEGG: bbt:BBta_3194 RpiR family transcriptional regulator; RpiR family transcriptional regulator 2065471 8324066 Afer_1966 Acidimicrobium ferrooxidans DSM 10331 RpiR family transcriptional regulator YP_003110543.1 2064632 R 525909 CDS YP_003110544.1 256372720 8324067 complement(2065468..2066835) 1 NC_013124.1 PFAM: glutamine synthetase catalytic region; KEGG: fra:Francci3_0315 L-glutamine synthetase; glutamine synthetase catalytic subunit 2066835 8324067 Afer_1967 Acidimicrobium ferrooxidans DSM 10331 glutamine synthetase catalytic subunit YP_003110544.1 2065468 R 525909 CDS YP_003110545.1 256372721 8324068 2066979..2068466 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: mva:Mvan_2919 amino acid permease-associated region; amino acid permease-associated protein 2068466 8324068 Afer_1968 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003110545.1 2066979 D 525909 CDS YP_003110546.1 256372722 8324069 2068560..2070023 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: acr:Acry_0648 amino acid permease-associated region; amino acid permease-associated protein 2070023 8324069 Afer_1969 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003110546.1 2068560 D 525909 CDS YP_003110547.1 256372723 8324070 2070025..2071053 1 NC_013124.1 PFAM: Acetamidase/Formamidase; KEGG: mva:Mvan_0644 acetamidase/formamidase; acetamidase/Formamidase 2071053 8324070 Afer_1970 Acidimicrobium ferrooxidans DSM 10331 acetamidase/Formamidase YP_003110547.1 2070025 D 525909 CDS YP_003110548.1 256372724 8324071 2071341..2074595 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: mpo:Mpop_1840 glycosyl transferase family 2; family 2 glycosyl transferase 2074595 8324071 Afer_1971 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003110548.1 2071341 D 525909 CDS YP_003110549.1 256372725 8324073 complement(2075991..2076323) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: rxy:Rxyl_2226 transposase IS3/IS911; transposase IS3/IS911 family protein 2076323 8324073 Afer_1973 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003110549.1 2075991 R 525909 CDS YP_003110550.1 256372726 8324074 2076556..2079117 1 NC_013124.1 PFAM: glycosyl transferase family 2; KEGG: met:M446_0315 glycosyl transferase family protein; family 2 glycosyl transferase 2079117 8324074 Afer_1974 Acidimicrobium ferrooxidans DSM 10331 family 2 glycosyl transferase YP_003110550.1 2076556 D 525909 CDS YP_003110551.1 256372727 8324075 complement(2079503..2081794) 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: jan:Jann_4283 glycosyl transferase, group 1; group 1 glycosyl transferase 2081794 8324075 Afer_1975 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003110551.1 2079503 R 525909 CDS YP_003110552.1 256372728 8324076 complement(2081796..2083421) 1 NC_013124.1 PFAM: glycosyl transferase group 1; KEGG: pap:PSPA7_6239 glycosyltransferase WbpX; group 1 glycosyl transferase 2083421 8324076 Afer_1976 Acidimicrobium ferrooxidans DSM 10331 group 1 glycosyl transferase YP_003110552.1 2081796 R 525909 CDS YP_003110553.1 256372729 8324077 complement(2083700..2085667) 1 NC_013124.1 KEGG: aba:Acid345_3948 NHL repeat protein; hypothetical protein 2085667 8324077 Afer_1977 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110553.1 2083700 R 525909 CDS YP_003110554.1 256372730 8324078 complement(2085882..2087294) 1 NC_013124.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: art:Arth_4084 NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase (AB-specific) 2087294 8324078 Afer_1978 Acidimicrobium ferrooxidans DSM 10331 NAD(P)(+) transhydrogenase (AB-specific) YP_003110554.1 2085882 R 525909 CDS YP_003110555.1 256372731 8324079 complement(2087291..2087584) 1 NC_013124.1 KEGG: ace:Acel_2021 NAD/NADP transhydrogenase alpha subunit-like; NAD/NADP transhydrogenase alpha subunit-like protein 2087584 8324079 Afer_1979 Acidimicrobium ferrooxidans DSM 10331 NAD/NADP transhydrogenase alpha subunit-like protein YP_003110555.1 2087291 R 525909 CDS YP_003110556.1 256372732 8324080 complement(2087614..2088711) 1 NC_013124.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: ade:Adeh_3005 alanine dehydrogenase/PNT-like protein; alanine dehydrogenase/PNT domain-containing protein 2088711 8324080 Afer_1980 Acidimicrobium ferrooxidans DSM 10331 alanine dehydrogenase/PNT domain-containing protein YP_003110556.1 2087614 R 525909 CDS YP_003110557.1 256372733 8324081 complement(2088763..2089431) 1 NC_013124.1 PFAM: response regulator receiver; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; response regulator receiver; KEGG: cms:CMS_0994 two-component system response regulator; LuxR family two component transcriptional regulator 2089431 8324081 Afer_1981 Acidimicrobium ferrooxidans DSM 10331 LuxR family two component transcriptional regulator YP_003110557.1 2088763 R 525909 CDS YP_003110558.1 256372734 8324082 complement(2089419..2090699) 1 NC_013124.1 PFAM: ATP-binding region ATPase domain protein; KEGG: kra:Krad_1351 integral membrane sensor signal transduction histidine kinase; signal transduction histidine kinase 2090699 8324082 Afer_1982 Acidimicrobium ferrooxidans DSM 10331 signal transduction histidine kinase YP_003110558.1 2089419 R 525909 CDS YP_003110559.1 256372735 8324083 2090776..2092131 1 NC_013124.1 PFAM: aminotransferase class-III; KEGG: nca:Noca_3921 aminotransferase; aminotransferase 2092131 8324083 Afer_1983 Acidimicrobium ferrooxidans DSM 10331 aminotransferase YP_003110559.1 2090776 D 525909 CDS YP_003110560.1 256372736 8324084 complement(2092133..2093584) 1 NC_013124.1 catalyzes the formation of 2-oxoglutarate from isocitrate; isocitrate dehydrogenase 2093584 8324084 Afer_1984 Acidimicrobium ferrooxidans DSM 10331 isocitrate dehydrogenase YP_003110560.1 2092133 R 525909 CDS YP_003110561.1 256372737 8324085 2093812..2094228 1 NC_013124.1 KEGG: sen:SACE_3654 hypothetical protein; hypothetical protein 2094228 8324085 Afer_1985 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110561.1 2093812 D 525909 CDS YP_003110562.1 256372738 8324086 complement(2094200..2096026) 1 NC_013124.1 PFAM: Ig family protein; KEGG: sus:Acid_0470 Ig family protein; hypothetical protein 2096026 8324086 Afer_1986 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110562.1 2094200 R 525909 CDS YP_003110563.1 256372739 8324087 complement(2096121..2097578) 1 NC_013124.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mkm:Mkms_5153 glutamate synthase subunit beta; glutamate synthase, NADH/NADPH, small subunit 2097578 8324087 Afer_1987 Acidimicrobium ferrooxidans DSM 10331 glutamate synthase, NADH/NADPH, small subunit YP_003110563.1 2096121 R 525909 CDS YP_003110564.1 256372740 8324088 complement(2097644..2102137) 1 NC_013124.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: ace:Acel_1078 glutamate synthase (NADH) large subunit; Glutamate synthase (ferredoxin) 2102137 8324088 Afer_1988 Acidimicrobium ferrooxidans DSM 10331 Glutamate synthase (ferredoxin) YP_003110564.1 2097644 R 525909 CDS YP_003110565.1 256372741 8324089 complement(2102212..2102625) 1 NC_013124.1 KEGG: ace:Acel_0502 hypothetical protein; hypothetical protein 2102625 8324089 Afer_1989 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110565.1 2102212 R 525909 CDS YP_003110566.1 256372742 8324090 2102808..2104004 1 NC_013124.1 PFAM: Colicin V production protein; peptidase S1 and S6 chymotrypsin/Hap; KEGG: ace:Acel_1988 peptidase S1 and S6, chymotrypsin/Hap; Colicin V production protein 2104004 8324090 Afer_1990 Acidimicrobium ferrooxidans DSM 10331 Colicin V production protein YP_003110566.1 2102808 D 525909 CDS YP_003110567.1 256372743 8324091 2104102..2105034 1 NC_013124.1 PFAM: beta-lactamase domain protein; KEGG: tfu:Tfu_2040 Zn-dependent hydrolase; beta-lactamase domain-containing protein 2105034 8324091 Afer_1991 Acidimicrobium ferrooxidans DSM 10331 beta-lactamase domain-containing protein YP_003110567.1 2104102 D 525909 CDS YP_003110568.1 256372744 8324092 2105031..2106215 1 NC_013124.1 KEGG: nar:Saro_2348 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerization domain protein; amidohydrolase 2106215 8324092 Afer_1992 Acidimicrobium ferrooxidans DSM 10331 amidohydrolase YP_003110568.1 2105031 D 525909 CDS YP_003110569.1 256372745 8324093 2106212..2107651 1 NC_013124.1 PFAM: protein of unknown function DUF195; KEGG: psa:PST_2781 hypothetical protein; hypothetical protein 2107651 8324093 Afer_1993 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110569.1 2106212 D 525909 CDS YP_003110570.1 256372746 8324094 2107648..2108508 1 NC_013124.1 KEGG: tfu:Tfu_0354 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; 3-mercaptopyruvate sulfurtransferase 2108508 8324094 Afer_1994 Acidimicrobium ferrooxidans DSM 10331 3-mercaptopyruvate sulfurtransferase YP_003110570.1 2107648 D 525909 CDS YP_003110571.1 256372747 8324095 2108845..2110290 1 NC_013124.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: afe:Lferr_2531 ammonium transporter; ammonium transporter 2110290 8324095 Afer_1995 Acidimicrobium ferrooxidans DSM 10331 ammonium transporter YP_003110571.1 2108845 D 525909 CDS YP_003110572.1 256372748 8324096 2110440..2111162 1 NC_013124.1 SMART: Rhodanese domain protein; KEGG: mpa:MAP2046 SseB; Rhodanese domain-containing protein 2111162 8324096 Afer_1996 Acidimicrobium ferrooxidans DSM 10331 Rhodanese domain-containing protein YP_003110572.1 2110440 D 525909 CDS YP_003110573.1 256372749 8324097 2111775..2112827 1 NC_013124.1 PFAM: ribonuclease BN; KEGG: ace:Acel_1654 ribonuclease BN; ribonuclease BN 2112827 8324097 Afer_1997 Acidimicrobium ferrooxidans DSM 10331 ribonuclease BN YP_003110573.1 2111775 D 525909 CDS YP_003110574.1 256372750 8324099 complement(2114775..2115791) 1 NC_013124.1 KEGG: art:Arth_4396 hypothetical protein; hypothetical protein 2115791 8324099 Afer_1999 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110574.1 2114775 R 525909 CDS YP_003110575.1 256372751 8324100 complement(2115940..2117583) 1 NC_013124.1 PFAM: amino acid permease-associated region; KEGG: msm:MSMEG_6701 amino acid permease; amino acid permease-associated protein 2117583 8324100 Afer_2000 Acidimicrobium ferrooxidans DSM 10331 amino acid permease-associated protein YP_003110575.1 2115940 R 525909 CDS YP_003110576.1 256372752 8324101 complement(2117776..2118048) 1 NC_013124.1 hypothetical protein 2118048 8324101 Afer_2001 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110576.1 2117776 R 525909 CDS YP_003110577.1 256372753 8324102 complement(2118045..2119559) 1 NC_013124.1 PFAM: FAD linked oxidase domain protein; KEGG: pth:PTH_2230 FAD/FMN-containing dehydrogenases; FAD linked oxidase domain-containing protein 2119559 8324102 Afer_2002 Acidimicrobium ferrooxidans DSM 10331 FAD linked oxidase domain-containing protein YP_003110577.1 2118045 R 525909 CDS YP_003110578.1 256372754 8324103 complement(2119556..2120794) 1 NC_013124.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: afu:AF0506 iron-sulfur binding reductase; hypothetical protein 2120794 8324103 Afer_2003 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110578.1 2119556 R 525909 CDS YP_003110579.1 256372755 8324104 2120900..2121637 1 NC_013124.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: msm:MSMEG_6700 regulatory protein; GntR family transcriptional regulator 2121637 8324104 Afer_2004 Acidimicrobium ferrooxidans DSM 10331 GntR family transcriptional regulator YP_003110579.1 2120900 D 525909 CDS YP_003110580.1 256372756 8324105 2121634..2122296 1 NC_013124.1 KEGG: mva:Mvan_1847 hypothetical protein; hypothetical protein 2122296 8324105 Afer_2005 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110580.1 2121634 D 525909 CDS YP_003110581.1 256372757 8324106 complement(2122293..2125877) 1 NC_013124.1 PFAM: cellulose-binding family II; glycoside hydrolase family 5; SMART: cellulose-binding family II; KEGG: bte:BTH_I2402 glycosy hydrolase family protein; cellulose-binding family protein 2125877 8324106 Afer_2006 Acidimicrobium ferrooxidans DSM 10331 cellulose-binding family protein YP_003110581.1 2122293 R 525909 CDS YP_003110582.1 256372758 8324107 complement(2126001..2127155) 1 NC_013124.1 TIGRFAM: CRISPR-associated protein, NE0113 family; KEGG: neu:NE0113 hypothetical protein; CRISPR-associated protein 2127155 8324107 Afer_2007 Acidimicrobium ferrooxidans DSM 10331 CRISPR-associated protein YP_003110582.1 2126001 R 525909 CDS YP_003110583.1 256372759 8324108 complement(2127470..2127916) 1 NC_013124.1 PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: nca:Noca_1646 MerR family transcriptional regulator; MerR family transcriptional regulator 2127916 8324108 Afer_2008 Acidimicrobium ferrooxidans DSM 10331 MerR family transcriptional regulator YP_003110583.1 2127470 R 525909 CDS YP_003110584.1 256372760 8324109 2128009..2129424 1 NC_013124.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: ace:Acel_0690 mercuric reductase; pyridine nucleotide-disulfide oxidoreductase dimerization subunit 2129424 8324109 Afer_2009 Acidimicrobium ferrooxidans DSM 10331 pyridine nucleotide-disulfide oxidoreductase dimerization subunit YP_003110584.1 2128009 D 525909 CDS YP_003110585.1 256372761 8324110 complement(2129668..2130090) 1 NC_013124.1 KEGG: cms:CMS_2164 hypothetical protein; hypothetical protein 2130090 8324110 Afer_2010 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110585.1 2129668 R 525909 CDS YP_003110586.1 256372762 8324111 complement(2130157..2130372) 1 NC_013124.1 hypothetical protein 2130372 8324111 Afer_2011 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110586.1 2130157 R 525909 CDS YP_003110587.1 256372763 8324112 2130796..2132304 1 NC_013124.1 PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; KEGG: cyb:CYB_1949 deoxyribodipyrimidine photolyase family protein; deoxyribodipyrimidine photolyase-like protein 2132304 8324112 Afer_2012 Acidimicrobium ferrooxidans DSM 10331 deoxyribodipyrimidine photolyase-like protein YP_003110587.1 2130796 D 525909 CDS YP_003110588.1 256372764 8324114 complement(2133070..2133963) 1 NC_013124.1 PFAM: Integrase catalytic region; KEGG: mva:Mvan_1111 integrase catalytic subunit; integrase catalytic subunit 2133963 8324114 Afer_2014 Acidimicrobium ferrooxidans DSM 10331 integrase catalytic subunit YP_003110588.1 2133070 R 525909 CDS YP_003110589.1 256372765 8324115 complement(2134014..2134292) 1 NC_013124.1 PFAM: transposase IS3/IS911 family protein; KEGG: mjl:Mjls_4451 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2134292 8324115 Afer_2015 Acidimicrobium ferrooxidans DSM 10331 transposase IS3/IS911 family protein YP_003110589.1 2134014 R 525909 CDS YP_003110590.1 256372766 8324116 complement(2134353..2134691) 1 NC_013124.1 KEGG: mbb:BCG_0673 hypothetical protein; hypothetical protein 2134691 8324116 Afer_2016 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110590.1 2134353 R 525909 CDS YP_003110591.1 256372767 8324117 complement(2134688..2134915) 1 NC_013124.1 KEGG: mpa:MAP2028c hypothetical protein; hypothetical protein 2134915 8324117 Afer_2017 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110591.1 2134688 R 525909 CDS YP_003110592.1 256372768 8324120 complement(2135403..2135873) 1 NC_013124.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: vei:Veis_2620 CMP/dCMP deaminase, zinc- binding; zinc-binding CMP/dCMP deaminase 2135873 8324120 Afer_2018 Acidimicrobium ferrooxidans DSM 10331 zinc-binding CMP/dCMP deaminase YP_003110592.1 2135403 R 525909 CDS YP_003110593.1 256372769 8324121 complement(2135860..2136243) 1 NC_013124.1 KEGG: spl:Spea_0584 CutA1 divalent ion tolerance protein; hypothetical protein 2136243 8324121 Afer_2019 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110593.1 2135860 R 525909 CDS YP_003110594.1 256372770 8324123 complement(2137295..2137657) 1 NC_013124.1 hypothetical protein 2137657 8324123 Afer_2020 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110594.1 2137295 R 525909 CDS YP_003110595.1 256372771 8324124 complement(2137654..2138517) 1 NC_013124.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: pas:Pars_0521 extradiol ring-cleavage dioxygenase III subunit B; Extradiol ring-cleavage dioxygenase class III protein subunit B 2138517 8324124 Afer_2021 Acidimicrobium ferrooxidans DSM 10331 Extradiol ring-cleavage dioxygenase class III protein subunit B YP_003110595.1 2137654 R 525909 CDS YP_003110596.1 256372772 8324125 complement(2138539..2139342) 1 NC_013124.1 KEGG: msm:MSMEG_4035 citrate synthase; citrate synthase 2139342 8324125 Afer_2022 Acidimicrobium ferrooxidans DSM 10331 citrate synthase YP_003110596.1 2138539 R 525909 CDS YP_003110597.1 256372773 8324126 complement(2139339..2140523) 1 NC_013124.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: krh:KRH_05070 L-carnitine dehydratase/bile acid-inducible protein F family protein; L-carnitine dehydratase/bile acid-inducible protein F 2140523 8324126 Afer_2023 Acidimicrobium ferrooxidans DSM 10331 L-carnitine dehydratase/bile acid-inducible protein F YP_003110597.1 2139339 R 525909 CDS YP_003110598.1 256372774 8324127 complement(2140632..2141477) 1 NC_013124.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: cgt:cgR_2273 hypothetical protein; IclR family transcriptional regulator 2141477 8324127 Afer_2024 Acidimicrobium ferrooxidans DSM 10331 IclR family transcriptional regulator YP_003110598.1 2140632 R 525909 CDS YP_003110599.1 256372775 8324128 2141653..2143167 1 NC_013124.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rxy:Rxyl_0206 hypothetical protein; amidohydrolase 2143167 8324128 Afer_2025 Acidimicrobium ferrooxidans DSM 10331 amidohydrolase YP_003110599.1 2141653 D 525909 CDS YP_003110600.1 256372776 8324129 2143594..2144061 1 NC_013124.1 KEGG: sma:SAV_6532 hypothetical protein; hypothetical protein 2144061 8324129 Afer_2026 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110600.1 2143594 D 525909 CDS YP_003110601.1 256372777 8324130 2144096..2145616 1 NC_013124.1 PFAM: major facilitator superfamily MFS_1; KEGG: ace:Acel_1673 EmrB/QacA family drug resistance transporter; major facilitator superfamily protein 2145616 8324130 Afer_2027 Acidimicrobium ferrooxidans DSM 10331 major facilitator superfamily protein YP_003110601.1 2144096 D 525909 CDS YP_003110602.1 256372778 8324131 complement(2145675..2145911) 1 NC_013124.1 KEGG: GI22175 gene product from transcript GI22175- RA; hypothetical protein 2145911 8324131 Afer_2028 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110602.1 2145675 R 525909 CDS YP_003110603.1 256372779 8324132 complement(2146066..2149758) 1 NC_013124.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: kra:Krad_1516 ABC transporter-related protein; ABC transporter-like protein 2149758 8324132 Afer_2029 Acidimicrobium ferrooxidans DSM 10331 ABC transporter-like protein YP_003110603.1 2146066 R 525909 CDS YP_003110604.1 256372780 8324133 complement(2150078..2150998) 1 NC_013124.1 KEGG: ace:Acel_2154 chromosome segregation DNA- binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 2150998 8324133 Afer_2030 Acidimicrobium ferrooxidans DSM 10331 parB-like partition protein YP_003110604.1 2150078 R 525909 CDS YP_003110605.1 256372781 8324134 complement(2150991..2151752) 1 NC_013124.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cth:Cthe_2377 chromosome segregation ATPase; Cobyrinic acid ac-diamide synthase 2151752 8324134 Afer_2031 Acidimicrobium ferrooxidans DSM 10331 Cobyrinic acid ac-diamide synthase YP_003110605.1 2150991 R 525909 CDS YP_003110606.1 256372782 8324135 complement(2152455..2153981) 1 NC_013124.1 PFAM: transposase IS4 family protein; KEGG: mgi:Mflv_2204 transposase, IS4 family protein; transposase IS4 family protein 2153981 8324135 Afer_2032 Acidimicrobium ferrooxidans DSM 10331 transposase IS4 family protein YP_003110606.1 2152455 R 525909 CDS YP_003110607.1 256372783 8324136 complement(2154799..2155455) 1 NC_013124.1 PFAM: glucose inhibited division protein; KEGG: similar to glucose inhibited division protein B (gidB); K03501 glucose inhibited division protein B; glucose inhibited division protein 2155455 8324136 Afer_2033 Acidimicrobium ferrooxidans DSM 10331 glucose inhibited division protein YP_003110607.1 2154799 R 525909 CDS YP_003110608.1 256372784 8324137 complement(2155430..2156275) 1 NC_013124.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: efa:EF3330 jag protein; single-stranded nucleic acid binding R3H domain-containing protein 2156275 8324137 Afer_2034 Acidimicrobium ferrooxidans DSM 10331 single-stranded nucleic acid binding R3H domain-containing protein YP_003110608.1 2155430 R 525909 CDS YP_003110609.1 256372785 8324138 complement(2156307..2157317) 1 NC_013124.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: rrs:RoseRS_3965 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 2157317 8324138 Afer_2035 Acidimicrobium ferrooxidans DSM 10331 60 kDa inner membrane insertion protein YP_003110609.1 2156307 R 525909 CDS YP_003110610.1 256372786 8324139 complement(2157314..2157580) 1 NC_013124.1 PFAM: protein of unknown function DUF37; KEGG: abb:ABBFA_003529 hypothetical protein; hypothetical protein 2157580 8324139 Afer_2036 Acidimicrobium ferrooxidans DSM 10331 hypothetical protein YP_003110610.1 2157314 R 525909 CDS YP_003110611.1 256372787 8324140 complement(2157577..2157930) 1 NC_013124.1 KEGG: rec:RHECIAT_CH0000479 ribonuclease P protein; ribonuclease P protein 2157930 8324140 Afer_2037 Acidimicrobium ferrooxidans DSM 10331 ribonuclease P protein YP_003110611.1 2157577 R 525909 CDS YP_003110612.1 256372788 8324141 complement(2157931..2158065) 1 NC_013124.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: fra:Francci3_4548 50S ribosomal protein L34; 50S ribosomal protein L34 2158065 8324141 Afer_2038 Acidimicrobium ferrooxidans DSM 10331 50S ribosomal protein L34 YP_003110612.1 2157931 R 525909 CDS