-- dump date 20111121_010222 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 367737000001 SEQ_END SEQ_END NC_009850.1 2341251 2341251 DR NC_009850.1; contig end 2341251..2341251 Arcobacter butzleri RM4018 YP_001488955.1 CDS dnaA NC_009850.1 1 1317 D Pfam matches to PF00308 Bac_DnaA, score 404.1, E-value 1.9E-118, and to PF08299 Bac_DnaA_C, score 60, E-value 7.2E-015; chromosomal replication initiator protein DnaA 1..1317 Arcobacter butzleri RM4018 5624777 YP_001488956.1 CDS dnaN NC_009850.1 1475 2545 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1475..2545 Arcobacter butzleri RM4018 5623761 YP_001488957.1 CDS gyrB NC_009850.1 2567 4888 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 2567..4888 Arcobacter butzleri RM4018 5623762 YP_001488958.1 CDS Abu_0004 NC_009850.1 4897 5868 R Pfam matches to PF00070 Pyr_redox, score 52.8, E-value 5.8E-015, and to PF00890 FAD_binding_2, score 16.4, E-value 7.4E-005; thioredoxin reductase complement(4897..5868) Arcobacter butzleri RM4018 5623763 YP_001488959.1 CDS queF NC_009850.1 5984 6367 D NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 5984..6367 Arcobacter butzleri RM4018 5624763 YP_001488960.1 CDS Abu_0006 NC_009850.1 6377 6964 D hypothetical protein 6377..6964 Arcobacter butzleri RM4018 5625296 YP_001488961.1 CDS Abu_0007 NC_009850.1 7173 7580 D integral membrane protein 7173..7580 Arcobacter butzleri RM4018 5625297 YP_001488962.1 CDS Abu_0008 NC_009850.1 7573 8379 R Pfam match to PF08241 Methyltransf_11, score 34.3, E-value 1.3E-008; methyltransferase complement(7573..8379) Arcobacter butzleri RM4018 5625298 YP_001488963.1 CDS modD NC_009850.1 8381 9235 R Pfam match to PF00005 ABC_tran, score 202.3, E-value 1.1E-057; molybdenum ABC transporter, ATP-binding protein complement(8381..9235) Arcobacter butzleri RM4018 5625299 YP_001488964.1 CDS modB NC_009850.1 9222 9929 R Pfam match to PF00528 BPD_transp_1, score 69.5, E-value 1E-017; molybdenum ABC transporter, permease complement(9222..9929) Arcobacter butzleri RM4018 5625300 YP_001488965.1 CDS Abu_0011 NC_009850.1 9922 10323 R hypothetical protein complement(9922..10323) Arcobacter butzleri RM4018 5625301 YP_001488966.1 CDS modA NC_009850.1 10320 11066 R Pfam match to PF01547 SBP_bac_1, score 31.8, E-value 2.1E-006; molybdenum ABC transporter, periplasmic molybdate-binding protein complement(10320..11066) Arcobacter butzleri RM4018 5625302 YP_001488967.1 CDS modE NC_009850.1 11076 11858 R Pfam match to PF03459 TOBE, score 61, E-value 3.4E-015; N-terminal:molybdenum-pterin binding domain; molybdenum-binding protein complement(11076..11858) Arcobacter butzleri RM4018 5625303 YP_001488968.1 CDS Abu_0014 NC_009850.1 11985 13229 D hypothetical protein 11985..13229 Arcobacter butzleri RM4018 5625304 YP_001488969.1 CDS Abu_0015 NC_009850.1 13399 14226 R Pfam matches to PF00126 HTH_1, score 57.1, E-value 5.4E-014, and to PF03466 LysR_substrate, score 48.7, E-value 1.8E-011; LysR family transcriptional regulator complement(13399..14226) Arcobacter butzleri RM4018 5625305 YP_001488970.1 CDS Abu_0016 NC_009850.1 14324 15502 D Pfam match to PF07690 MFS_1, score 99.6, E-value 1.1E-027; MFS permease 14324..15502 Arcobacter butzleri RM4018 5625306 YP_001488971.1 CDS Abu_0017 NC_009850.1 15585 24281 D hypothetical protein 15585..24281 Arcobacter butzleri RM4018 5624571 YP_001488972.1 CDS Abu_0018 NC_009850.1 24340 25242 R Pfam match to PF00849 PseudoU_synth_2, score 141.6, E-value 2E-039; ribosomal large subunit pseudouridine synthase complement(24340..25242) Arcobacter butzleri RM4018 5624572 YP_001488973.1 CDS purB NC_009850.1 25356 26684 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 25356..26684 Arcobacter butzleri RM4018 5624573 YP_001488974.1 CDS nrdA NC_009850.1 26695 29079 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 26695..29079 Arcobacter butzleri RM4018 5624574 YP_001488975.1 CDS nrdF NC_009850.1 29209 30228 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 29209..30228 Arcobacter butzleri RM4018 5624575 YP_001488976.1 CDS Abu_0022 NC_009850.1 30386 31249 D hypothetical protein 30386..31249 Arcobacter butzleri RM4018 5624576 YP_001488977.1 CDS Abu_0023 NC_009850.1 31307 31720 D Pfam match to PF03061 4HBT, score 35, E-value 4.8E-009; hypothetical protein 31307..31720 Arcobacter butzleri RM4018 5624577 YP_001488978.1 CDS Abu_0024 NC_009850.1 31737 31988 D hypothetical protein 31737..31988 Arcobacter butzleri RM4018 5624578 YP_001488979.1 CDS Abu_0025 NC_009850.1 32050 33000 D Pfam match to PF00691 OmpA, score 75.9, E-value 1.2E-019; hypothetical protein 32050..33000 Arcobacter butzleri RM4018 5624579 YP_001488980.1 CDS Abu_0026 NC_009850.1 33004 33477 D hypothetical protein 33004..33477 Arcobacter butzleri RM4018 5624580 YP_001488981.1 CDS Abu_0027 NC_009850.1 33483 34469 R Pfam matches to PF00107 ADH_zinc_N, score 70.2, E-value 6E-018, and to PF08240 ADH_N, score 38.1, E-value 2.9E-008; zinc-containing alcohol dehydrogenase superfamily protein complement(33483..34469) Arcobacter butzleri RM4018 5624581 YP_001488982.1 CDS Abu_0028 NC_009850.1 34511 34918 D Pfam match to PF01638 DUF24, score 164.8, E-value 4E-052; hypothetical protein 34511..34918 Arcobacter butzleri RM4018 5623160 YP_001488983.1 CDS gpsA NC_009850.1 34920 35816 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(34920..35816) Arcobacter butzleri RM4018 5623161 YP_001488984.1 CDS gatB NC_009850.1 35818 37251 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(35818..37251) Arcobacter butzleri RM4018 5623162 YP_001488985.1 CDS Abu_0031 NC_009850.1 37261 38085 R hypothetical protein complement(37261..38085) Arcobacter butzleri RM4018 5623163 YP_001488986.1 CDS Abu_0032 NC_009850.1 38162 40999 R Pfam matches to PF02913 FAD-oxidase_C, score 231.9, E-value 1.2E-066, and to PF01565 FAD_binding_4, score 95.2, E-value 2.7E-026; oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein complement(38162..40999) Arcobacter butzleri RM4018 5623164 YP_001488987.1 CDS lctP NC_009850.1 41118 42758 R Pfam match to PF02652 Lactate_perm, score 950.5, E-value 6.1E-283; L-lactate permease complement(41118..42758) Arcobacter butzleri RM4018 5623165 YP_001488988.1 CDS Abu_0034 NC_009850.1 42849 43493 R Pfam matches to PF00072 Response_reg, score 81.2, E-value 2E-024, and to PF00486 Trans_reg_C, score 56.1, E-value 1.1E-013; two-component response regulator complement(42849..43493) Arcobacter butzleri RM4018 5623166 YP_001488989.1 CDS Abu_0035 NC_009850.1 43495 45687 R Pfam matches to PF02518 HATPase_c, score 74.1, E-value 3.9E-019, and to PF08448 PAS_4, score 54.9, E-value 1.4E-014; two-component sensor histidine kinase complement(43495..45687) Arcobacter butzleri RM4018 5623167 YP_001488990.1 CDS Abu_0036 NC_009850.1 45712 46299 R Pfam match to PF02589 DUF162, score 34.4, E-value 3.2E-008; hypothetical protein complement(45712..46299) Arcobacter butzleri RM4018 5623168 YP_001488991.1 CDS Abu_0037 NC_009850.1 46292 47671 R iron-sulfur cluster binding protein complement(46292..47671) Arcobacter butzleri RM4018 5623169 YP_001488992.1 CDS Abu_0038 NC_009850.1 47668 48417 R Pfam match to PF02754 CCG, score 55.2, E-value 2E-013; Fe-S oxidoreductase complement(47668..48417) Arcobacter butzleri RM4018 5623170 YP_001488993.1 CDS Abu_0039 NC_009850.1 48510 48953 R Pfam match to PF00383 dCMP_cyt_deam_1, score 125.7, E-value 1.2E-034; dCMP deaminase complement(48510..48953) Arcobacter butzleri RM4018 5624582 YP_001488994.1 CDS accB NC_009850.1 49110 49583 D Pfam match to PF00364 Biotin_lipoyl, score 94.5, E-value 2.8E-025; acetyl-CoA carboxylase, biotin carboxyl carrier protein 49110..49583 Arcobacter butzleri RM4018 5624583 YP_001488995.1 CDS accC1 NC_009850.1 49593 50945 D biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase 49593..50945 Arcobacter butzleri RM4018 5624584 YP_001488996.1 CDS Abu_0042 NC_009850.1 51167 52717 D Pfam matches to PF00270 DEAD, score 233.5, E-value 4.1E-067, and to PF00271 Helicase_C, score 128, E-value 1.8E-042; DEAD-box ATP dependent DNA helicase 51167..52717 Arcobacter butzleri RM4018 5624585 YP_001488997.1 CDS Abu_0043 NC_009850.1 52925 54520 D Pfam match to PF01384 PHO4, score 434.4, E-value 1.4E-127; phosphate permease 52925..54520 Arcobacter butzleri RM4018 5624586 YP_001488998.1 CDS Abu_0044 NC_009850.1 54761 55495 D Pfam match to PF03547 Auxin_eff, score 26.2, E-value 3.8E-008; permease 54761..55495 Arcobacter butzleri RM4018 5624587 YP_001488999.1 CDS asnB1 NC_009850.1 55500 57287 D Pfam matches to PF00733 Asn_synthase, score 243.7, E-value 3.6E-070, and to PF00310 GATase_2, score -22.4, E-value 2.4E-009; asparagine synthetase (glutamine-hydrolyzing) 55500..57287 Arcobacter butzleri RM4018 5624588 YP_001489000.1 CDS Abu_0046 NC_009850.1 57411 57848 R hypothetical protein complement(57411..57848) Arcobacter butzleri RM4018 5624589 YP_001489001.1 CDS Abu_0047 NC_009850.1 58145 59545 R Pfam match to PF02562 PhoH, score 56.8, E-value 6.5E-014; PhoH family protein complement(58145..59545) Arcobacter butzleri RM4018 5624590 YP_001489002.1 CDS Abu_0048 NC_009850.1 59538 60089 R Pfam match to PF03653 UPF0093, score 173.1, E-value 6.2E-049; hypothetical protein complement(59538..60089) Arcobacter butzleri RM4018 5624591 YP_001489003.1 CDS Abu_0049 NC_009850.1 60059 61243 R Pfam match to PF00004 AAA, score 57, E-value 5E-017; recombination factor protein RarA complement(60059..61243) Arcobacter butzleri RM4018 5624592 YP_001489004.1 CDS rluB NC_009850.1 61227 62054 R Pfam matches to PF01479 S4, score 54, E-value 4.5E-013, and to PF00849 PseudoU_synth_2, score 28, E-value 7.7E-009; ribosomal large subunit pseudouridine synthase B complement(61227..62054) Arcobacter butzleri RM4018 5625137 YP_001489005.1 CDS Abu_0051 NC_009850.1 62051 63013 R Pfam matches to PF01380 SIS, score 115.1, E-value 1.8E-031, and to PF00571 CBS, score 86.1, E-value 9.7E-023; carbohydrate isomerase KpsF/GutQ family protein complement(62051..63013) Arcobacter butzleri RM4018 5625138 YP_001489006.1 CDS Abu_0052 NC_009850.1 63026 64948 R Pfam matches to PF00753 Lactamase_B, score 93.1, E-value 7.8E-025, and to PF07521 RMMBL, score 51.7, E-value 2.2E-012; hypothetical protein complement(63026..64948) Arcobacter butzleri RM4018 5625139 YP_001489007.1 CDS ksgA NC_009850.1 64932 65729 R Pfam match to PF00398 RrnaAD, score 145.7, E-value 1.2E-040; dimethyladenosine transferase complement(64932..65729) Arcobacter butzleri RM4018 5625140 YP_001489008.1 CDS hisF1 NC_009850.1 65806 66567 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 65806..66567 Arcobacter butzleri RM4018 5625141 YP_001489009.1 CDS Abu_0055 NC_009850.1 66569 67252 D hypothetical protein 66569..67252 Arcobacter butzleri RM4018 5625142 YP_001489010.1 CDS Abu_0056 NC_009850.1 67249 67785 D purine nucleoside phosphorylase 67249..67785 Arcobacter butzleri RM4018 5625143 YP_001489011.1 CDS Abu_0057 NC_009850.1 67796 68878 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 67796..68878 Arcobacter butzleri RM4018 5625144 YP_001489012.1 CDS gltX NC_009850.1 68967 70376 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 68967..70376 Arcobacter butzleri RM4018 5625145 YP_001489013.1 CDS rbpA NC_009850.1 70400 70696 D Pfam match to PF00076 RRM_1, score 99, E-value 1.3E-026; RNA recognition motif-containing protein 70400..70696 Arcobacter butzleri RM4018 5625146 YP_001489014.1 CDS Abu_0060 NC_009850.1 70806 71465 D Pfam matches to PF00072 Response_reg, score 82.1, E-value 1.1E-024, and to PF00486 Trans_reg_C, score 69.6, E-value 9.2E-018; two-component response regulator 70806..71465 Arcobacter butzleri RM4018 5625147 YP_001489015.1 CDS Abu_0061 NC_009850.1 71440 72591 D Pfam matches to PF02518 HATPase_c, score 84.7, E-value 2.6E-022, and to PF00512 HisKA, score 35.1, E-value 2.2E-007; two-component sensor histidine kinase 71440..72591 Arcobacter butzleri RM4018 5623615 YP_001489016.1 CDS Abu_0062 NC_009850.1 72655 73038 D hypothetical protein 72655..73038 Arcobacter butzleri RM4018 5623616 YP_001489017.1 CDS Abu_0063 NC_009850.1 73038 74225 D Pfam match to PF02321 OEP, score 28.2, E-value 2.7E-005; hypothetical protein 73038..74225 Arcobacter butzleri RM4018 5623617 YP_001489018.1 CDS czcB NC_009850.1 74222 75226 D cation efflux system, membrane fusion protein 74222..75226 Arcobacter butzleri RM4018 5623618 YP_001489019.1 CDS czcA NC_009850.1 75233 78340 D Pfam match to PF00873 ACR_tran, score 599.9, E-value 2.1E-177; heavy metal efflux pump 75233..78340 Arcobacter butzleri RM4018 5623619 YP_001489020.1 CDS Abu_0066 NC_009850.1 78389 78952 D Pfam match to PF04264 YceI, score 234.1, E-value 2.7E-067; periplasmic protein 78389..78952 Arcobacter butzleri RM4018 5623620 YP_001489021.1 CDS Abu_0067 NC_009850.1 78983 80311 R Pfam match to PF05670 DUF814, score 73.9, E-value 4.8E-019; fibronectin/fibrinogen-binding protein complement(78983..80311) Arcobacter butzleri RM4018 5623621 YP_001489022.1 CDS Abu_0068 NC_009850.1 80405 80722 D hypothetical protein 80405..80722 Arcobacter butzleri RM4018 5623622 YP_001489023.1 CDS Abu_0069 NC_009850.1 80789 82393 D hypothetical protein 80789..82393 Arcobacter butzleri RM4018 5623623 YP_001489024.1 CDS Abu_0070 NC_009850.1 82420 82935 R hypothetical protein complement(82420..82935) Arcobacter butzleri RM4018 5623624 YP_001489025.1 CDS thrS NC_009850.1 83047 84855 D catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 83047..84855 Arcobacter butzleri RM4018 5623625 YP_001489026.1 CDS infC NC_009850.1 84852 85379 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 84852..85379 Arcobacter butzleri RM4018 5624414 YP_001489027.1 CDS rpmI NC_009850.1 85518 85715 D Pfam match to PF01632 Ribosomal_L35p, score 42.6, E-value 1E-005; 50S ribosomal protein L35 85518..85715 Arcobacter butzleri RM4018 5624415 YP_001489028.1 CDS rplT NC_009850.1 85814 86170 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 85814..86170 Arcobacter butzleri RM4018 5624416 YP_001489029.1 CDS Abu_0075 NC_009850.1 86243 87439 R Pfam match to PF00581 Rhodanese, score 57.4, E-value 4.4E-014; rhodanese-like sulfur transferase complement(86243..87439) Arcobacter butzleri RM4018 5624417 YP_001489030.1 CDS Abu_0076 NC_009850.1 87423 87659 R hypothetical protein complement(87423..87659) Arcobacter butzleri RM4018 5624418 YP_001489031.1 CDS Abu_0077 NC_009850.1 87669 89138 R Pfam match to PF07992 Pyr_redox_2, score 49.4, E-value 1.1E-011; sulfide:quinone reductase complement(87669..89138) Arcobacter butzleri RM4018 5624419 YP_001489032.1 CDS mobA NC_009850.1 89219 89821 R molybdopterin-guanine dinucleotide biosynthesis protein complement(89219..89821) Arcobacter butzleri RM4018 5624420 YP_001489033.1 CDS leuC NC_009850.1 89821 91101 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit complement(89821..91101) Arcobacter butzleri RM4018 5624421 YP_001489034.1 CDS lspA NC_009850.1 91170 91634 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(91170..91634) Arcobacter butzleri RM4018 5624422 YP_001489035.1 CDS glmM NC_009850.1 91631 92965 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(91631..92965) Arcobacter butzleri RM4018 5624423 YP_001489036.1 CDS rpsT NC_009850.1 93049 93309 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 93049..93309 Arcobacter butzleri RM4018 5624424 YP_001489037.1 CDS prfA NC_009850.1 93313 94380 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 93313..94380 Arcobacter butzleri RM4018 5623840 YP_001489038.1 CDS Abu_0084 NC_009850.1 94401 94589 D hypothetical protein 94401..94589 Arcobacter butzleri RM4018 5623841 YP_001489039.1 CDS pstS NC_009850.1 94665 95720 D phosphate ABC transporter, periplasmic phosphate-binding protein 94665..95720 Arcobacter butzleri RM4018 5623842 YP_001489040.1 CDS Abu_0086 NC_009850.1 95790 97520 D Pfam matches to PF00563 EAL, score 127.7, E-value 2.9E-035, and to PF00990 GGDEF, score -12, E-value 3.7E-006; EAL/GGDEF domain-containing protein 95790..97520 Arcobacter butzleri RM4018 5623843 YP_001489041.1 CDS pstC NC_009850.1 97552 98508 D Pfam match to PF00528 BPD_transp_1, score 60.3, E-value 5.9E-015; phosphate ABC transporter, permease 97552..98508 Arcobacter butzleri RM4018 5623844 YP_001489042.1 CDS pstA NC_009850.1 98505 99689 D Pfam match to PF00528 BPD_transp_1, score 48.7, E-value 1.8E-011; phosphate ABC transporter, permease 98505..99689 Arcobacter butzleri RM4018 5623845 YP_001489043.1 CDS pstB NC_009850.1 99705 100475 D Pfam match to PF00005 ABC_tran, score 187.1, E-value 3.8E-053; phosphate transporter, ATP-binding protein 99705..100475 Arcobacter butzleri RM4018 5623846 YP_001489044.1 CDS Abu_0090 NC_009850.1 100475 101143 D phosphate transport system regulatory protein PhoU 100475..101143 Arcobacter butzleri RM4018 5623847 YP_001489045.1 CDS Abu_0091 NC_009850.1 101167 101571 D hypothetical protein 101167..101571 Arcobacter butzleri RM4018 5623848 YP_001489046.1 CDS Abu_0092 NC_009850.1 101561 102238 D Pfam matches to PF00072 Response_reg, score 103.8, E-value 2.4E-031, and to PF00486 Trans_reg_C, score 42.4, E-value 1.4E-009; two-component response regulator 101561..102238 Arcobacter butzleri RM4018 5623849 YP_001489047.1 CDS Abu_0093 NC_009850.1 102232 103617 D Pfam matches to PF02518 HATPase_c, score 64.8, E-value 2.5E-016, and to PF00512 HisKA, score 59.4, E-value 1.1E-014; two-component sensor histidine kinase 102232..103617 Arcobacter butzleri RM4018 5623850 YP_001489048.1 CDS rplM NC_009850.1 103693 104112 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 103693..104112 Arcobacter butzleri RM4018 5624537 YP_001489049.1 CDS rpsI NC_009850.1 104118 104507 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 104118..104507 Arcobacter butzleri RM4018 5624538 YP_001489050.1 CDS appA NC_009850.1 104560 106110 D Pfam match to PF00496 SBP_bac_5, score 246.3, E-value 5.7E-071; oligopeptide ABC transporter, periplasmic substrate-binding protein 104560..106110 Arcobacter butzleri RM4018 5624539 YP_001489051.1 CDS Abu_0097 NC_009850.1 106120 106767 D Pfam match to PF00702 Hydrolase, score 70.1, E-value 1.2E-019; hypothetical protein 106120..106767 Arcobacter butzleri RM4018 5624540 YP_001489052.1 CDS Abu_0098 NC_009850.1 107081 108052 D Pfam match to PF03401 Bug, score -36.5, E-value 1.3E-008; tricarboxylic transport protein TctC 107081..108052 Arcobacter butzleri RM4018 5624541 YP_001489053.1 CDS Abu_0099 NC_009850.1 108089 108574 D tricarboxylic transport protein TctB 108089..108574 Arcobacter butzleri RM4018 5624542 YP_001489054.1 CDS Abu_0100 NC_009850.1 108571 110088 D Pfam match to PF01970 DUF112, score 629.2, E-value 3.2E-186; tricarboxylic transport protein TctA 108571..110088 Arcobacter butzleri RM4018 5624543 YP_001489055.1 CDS Abu_0101 NC_009850.1 110116 110796 D Pfam matches to PF00072 Response_reg, score 96.8, E-value 3.3E-029, and to PF00486 Trans_reg_C, score 46.6, E-value 7.5E-011; two-component response regulator 110116..110796 Arcobacter butzleri RM4018 5624544 YP_001489056.1 CDS Abu_0102 NC_009850.1 110786 112966 D Pfam match to PF02518 HATPase_c, score 51.7, E-value 2.2E-012; two-component sensor histidine kinase 110786..112966 Arcobacter butzleri RM4018 5624545 YP_001489057.1 CDS cynT1 NC_009850.1 113010 113663 D Pfam match to PF00484 Pro_CA, score 123.3, E-value 6.4E-034; carbonic anhydrase 113010..113663 Arcobacter butzleri RM4018 5624546 YP_001489058.1 CDS Abu_0104 NC_009850.1 113656 114741 D Pfam match to PF05145 AmoA, score 88.1, E-value 2.4E-023; ammonia monooxygenase 113656..114741 Arcobacter butzleri RM4018 5624547 YP_001489059.1 CDS Abu_0105 NC_009850.1 114718 115296 R hypothetical protein complement(114718..115296) Arcobacter butzleri RM4018 5624367 YP_001489060.1 CDS Abu_0106 NC_009850.1 115293 116201 R Pfam match to PF02470 MCE, score 70.7, E-value 4.3E-018; ABC transporter, periplasmic substrate-binding protein complement(115293..116201) Arcobacter butzleri RM4018 5624368 YP_001489061.1 CDS iamA NC_009850.1 116201 116938 R Pfam match to PF00005 ABC_tran, score 170.2, E-value 4.8E-048; ABC transporter, ATP-binding protein complement(116201..116938) Arcobacter butzleri RM4018 5624369 YP_001489062.1 CDS iamB NC_009850.1 116939 118051 R Pfam match to PF02405 DUF140, score 282.3, E-value 8.5E-082; ABC transporter, permease complement(116939..118051) Arcobacter butzleri RM4018 5624370 YP_001489063.1 CDS Abu_0109 NC_009850.1 118130 119041 R hypothetical protein complement(118130..119041) Arcobacter butzleri RM4018 5624371 YP_001489064.1 CDS Abu_0110 NC_009850.1 119034 120617 R hypothetical protein complement(119034..120617) Arcobacter butzleri RM4018 5624372 YP_001489065.1 CDS luxS NC_009850.1 120758 121273 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 120758..121273 Arcobacter butzleri RM4018 5624373 YP_001489066.1 CDS Abu_0112 NC_009850.1 121275 121715 D hypothetical protein 121275..121715 Arcobacter butzleri RM4018 5624374 YP_001489067.1 CDS Abu_0113 NC_009850.1 121697 122467 D Pfam match to PF05430 DUF752, score 83.4, E-value 6.6E-022; hypothetical protein 121697..122467 Arcobacter butzleri RM4018 5624375 YP_001489068.1 CDS dacA NC_009850.1 122506 123327 D Pfam match to PF00768 Peptidase_S11, score 153.4, E-value 5.5E-043; serine-type D-Ala-D-Ala carboxypeptidase 122506..123327 Arcobacter butzleri RM4018 5624376 YP_001489069.1 CDS Abu_0115 NC_009850.1 123339 123839 R hypothetical protein complement(123339..123839) Arcobacter butzleri RM4018 5624377 YP_001489070.1 CDS Abu_0116 NC_009850.1 123957 124397 D Pfam match to PF07681 DoxX, score 106.8, E-value 5.7E-029; DoxX family protein 123957..124397 Arcobacter butzleri RM4018 5624425 YP_001489071.1 CDS metH NC_009850.1 124421 127900 R Pfam matches to PF02574 S-methyl_trans, score 258, E-value 1.8E-074, and to PF02965 Met_synt_B12, score 150, E-value 5.9E-042, and to PF00809 Pterin_bind, score 130.4, E-value 4.7E-036, and to PF02310 B12-binding, score 91.2, E-value 2.9E-024, and to PF02607 B12-binding_2, score 87.1, E-value 5E-023; 5-methyltetrahydrofolate--homocysteine methyltransferase complement(124421..127900) Arcobacter butzleri RM4018 5624426 YP_001489072.1 CDS ilvE NC_009850.1 128095 129015 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 128095..129015 Arcobacter butzleri RM4018 5624427 YP_001489073.1 CDS Abu_0119 NC_009850.1 129060 130133 D Pfam match to PF01145 Band_7, score 108.4, E-value 1.8E-029; Band 7 family protein 129060..130133 Arcobacter butzleri RM4018 5624428 YP_001489074.1 CDS Abu_0120 NC_009850.1 130174 130461 D hypothetical protein 130174..130461 Arcobacter butzleri RM4018 5624429 YP_001489075.1 CDS hisI NC_009850.1 130461 131141 D Pfam matches to PF01502 PRA-CH, score 173.5, E-value 4.8E-049, and to PF01503 PRA-PH, score 98.2, E-value 2.2E-026; bifunctional phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphohydrolase 130461..131141 Arcobacter butzleri RM4018 5624430 YP_001489076.1 CDS Abu_0122 NC_009850.1 131234 131491 D hypothetical protein 131234..131491 Arcobacter butzleri RM4018 5624431 YP_001489077.1 CDS mrp NC_009850.1 131527 132708 R ATP/GTP-binding protein complement(131527..132708) Arcobacter butzleri RM4018 5624432 YP_001489078.1 CDS thiC NC_009850.1 132775 134127 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(132775..134127) Arcobacter butzleri RM4018 5624433 YP_001489079.1 CDS Abu_0125 NC_009850.1 134273 135115 D hypothetical protein 134273..135115 Arcobacter butzleri RM4018 5624434 YP_001489080.1 CDS ispDF NC_009850.1 135154 136278 D bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 135154..136278 Arcobacter butzleri RM4018 5624435 YP_001489081.1 CDS Abu_0127 NC_009850.1 136263 137165 D Pfam match to PF00072 Response_reg, score 27.6, E-value 5.3E-008; two-component response regulator 136263..137165 Arcobacter butzleri RM4018 5625043 YP_001489082.1 CDS pgpA NC_009850.1 137176 137652 D Pfam match to PF04608 PgpA, score 199.6, E-value 6.8E-057; phosphatidylglycerophosphatase A 137176..137652 Arcobacter butzleri RM4018 5625044 YP_001489083.1 CDS Abu_0129 NC_009850.1 137669 138382 D hypothetical protein 137669..138382 Arcobacter butzleri RM4018 5625045 YP_001489084.1 CDS carA NC_009850.1 138460 139578 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(138460..139578) Arcobacter butzleri RM4018 5625046 YP_001489085.1 CDS Abu_0131 NC_009850.1 139578 140129 R Pfam match to PF04368 DUF507, score 225.9, E-value 8E-065; hypothetical protein complement(139578..140129) Arcobacter butzleri RM4018 5625047 YP_001489086.1 CDS purA NC_009850.1 140134 141384 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(140134..141384) Arcobacter butzleri RM4018 5625048 YP_001489087.1 CDS hisZ NC_009850.1 141386 142231 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(141386..142231) Arcobacter butzleri RM4018 5625049 YP_001489088.1 CDS Abu_0134 NC_009850.1 142231 143343 R Pfam match to PF00266 Aminotran_5, score -54, E-value 5.4E-010; aminotransferase complement(142231..143343) Arcobacter butzleri RM4018 5625050 YP_001489089.1 CDS Abu_0135 NC_009850.1 143489 144118 D Pfam match to PF04264 YceI, score 156, E-value 8.9E-044; periplasmic protein 143489..144118 Arcobacter butzleri RM4018 5625051 YP_001489090.1 CDS Abu_0136 NC_009850.1 144274 144726 D Pfam match to PF01047 MarR, score 57.9, E-value 5.6E-016; MarR family transcriptional regulator 144274..144726 Arcobacter butzleri RM4018 5625052 YP_001489091.1 CDS Abu_0137 NC_009850.1 144782 145333 D Pfam match to PF04264 YceI, score 219.5, E-value 6.9E-063; periplasmic protein 144782..145333 Arcobacter butzleri RM4018 5625053 YP_001489092.1 CDS Abu_0138 NC_009850.1 145357 146133 D Pfam match to PF02900 LigB, score 166.6, E-value 5.6E-047; LigB family protein 145357..146133 Arcobacter butzleri RM4018 5623377 YP_001489093.1 CDS pirA NC_009850.1 146130 146828 D Pfam match to PF02678 Pirin, score 163.7, E-value 4.3E-046; pirin 146130..146828 Arcobacter butzleri RM4018 5623378 YP_001489094.1 CDS gapB NC_009850.1 146885 147913 D Pfam matches to PF00044 Gp_dh_N, score 85.9, E-value 1.1E-022, and to PF02800 Gp_dh_C, score 48.9, E-value 5.9E-012; glyceraldehyde-3-phosphate dehydrogenase B 146885..147913 Arcobacter butzleri RM4018 5623379 YP_001489095.1 CDS purM NC_009850.1 147953 148948 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(147953..148948) Arcobacter butzleri RM4018 5623380 YP_001489096.1 CDS speE NC_009850.1 149049 149597 D Pfam match to PF01564 Spermine_synth, score 19.5, E-value 8.3E-006; spermidine synthase 149049..149597 Arcobacter butzleri RM4018 5623381 YP_001489097.1 CDS coaE NC_009850.1 149641 150231 D Pfam match to PF01121 CoaE, score 157.3, E-value 3.7E-044; dephospho-CoA kinase 149641..150231 Arcobacter butzleri RM4018 5623382 YP_001489098.1 CDS dapF NC_009850.1 150228 150968 D Pfam match to PF01678 DAP_epimerase, score 74.9, E-value 2.3E-019; diaminopimelate epimerase 150228..150968 Arcobacter butzleri RM4018 5623383 YP_001489099.1 CDS purT NC_009850.1 150993 152162 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 150993..152162 Arcobacter butzleri RM4018 5623384 YP_001489100.1 CDS Abu_0146 NC_009850.1 152171 152641 D Pfam match to PF00583 Acetyltransf_1, score 55.2, E-value 2E-013; MarR family transcriptional regulator 152171..152641 Arcobacter butzleri RM4018 5623385 YP_001489101.1 CDS Abu_0147 NC_009850.1 152643 152951 R Pfam match to PF08238 Sel1, score 44.1, E-value 4.3E-010; hypothetical protein complement(152643..152951) Arcobacter butzleri RM4018 5623386 YP_001489102.1 CDS Abu_0148 NC_009850.1 153035 154255 R hypothetical protein complement(153035..154255) Arcobacter butzleri RM4018 5623387 YP_001489103.1 CDS ubiA NC_009850.1 154544 155392 R UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase complement(154544..155392) Arcobacter butzleri RM4018 5625220 YP_001489104.1 CDS Abu_0151 NC_009850.1 155484 155687 D hypothetical protein 155484..155687 Arcobacter butzleri RM4018 5625221 YP_001489105.1 CDS miaA NC_009850.1 155684 156559 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 155684..156559 Arcobacter butzleri RM4018 5625222 YP_001489106.1 CDS rpmE NC_009850.1 156640 156843 D Pfam match to PF01197 Ribosomal_L31, score 135.8, E-value 1.1E-037; 50S ribosomal protein L31 156640..156843 Arcobacter butzleri RM4018 5625223 YP_001489107.1 CDS Abu_0154 NC_009850.1 156856 157677 D Pfam match to PF00590 TP_methylase, score 75, E-value 2.1E-019; methyltransferase 156856..157677 Arcobacter butzleri RM4018 5625224 YP_001489108.1 CDS Abu_0155 NC_009850.1 157674 158363 D Pfam matches to PF00588 SpoU_methylase, score 161.9, E-value 1.5E-045, and to PF08032 SpoU_sub_bind, score 62.1, E-value 1.7E-015; TrmH family tRNA methyltransferase 157674..158363 Arcobacter butzleri RM4018 5625225 YP_001489109.1 CDS Abu_0156 NC_009850.1 158376 159185 D hypothetical protein 158376..159185 Arcobacter butzleri RM4018 5625226 YP_001489110.1 CDS aspB1 NC_009850.1 159189 160403 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 159189..160403 Arcobacter butzleri RM4018 5625227 YP_001489111.1 CDS hom NC_009850.1 160528 161790 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 160528..161790 Arcobacter butzleri RM4018 5625228 YP_001489112.1 CDS traT NC_009850.1 161886 162662 D Pfam match to PF05818 TraT, score 58.2, E-value 2.4E-014; TraT complement resistance protein precursor 161886..162662 Arcobacter butzleri RM4018 5625229 YP_001489113.1 CDS cdsA NC_009850.1 162796 163554 D Pfam match to PF01148 CTP_transf_1, score 209.9, E-value 5.3E-060; CDP-diglyceride synthetase CdsA 162796..163554 Arcobacter butzleri RM4018 5625230 YP_001489114.1 CDS dxr NC_009850.1 163551 164618 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 163551..164618 Arcobacter butzleri RM4018 5624871 YP_001489115.1 CDS Abu_0162 NC_009850.1 164608 164901 D hypothetical protein 164608..164901 Arcobacter butzleri RM4018 5624872 YP_001489116.1 CDS Abu_0163 NC_009850.1 164894 165460 D Pfam match to PF06821 DUF1234, score 33.4, E-value 1.5E-010; hypothetical protein 164894..165460 Arcobacter butzleri RM4018 5624873 YP_001489117.1 CDS gcp NC_009850.1 165463 166464 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 165463..166464 Arcobacter butzleri RM4018 5624874 YP_001489118.1 CDS Abu_0165 NC_009850.1 166465 166812 D Pfam match to PF01253 SUI1, score 33.1, E-value 2E-007; hypothetical protein 166465..166812 Arcobacter butzleri RM4018 5624875 YP_001489119.1 CDS Abu_0166 NC_009850.1 166844 168229 D Pfam matches to PF01256 Carb_kinase, score 189.8, E-value 5.9E-054, and to PF03853 YjeF_N, score 149.5, E-value 8.2E-042; carbohydrate kinase 166844..168229 Arcobacter butzleri RM4018 5624876 YP_001489120.1 CDS Abu_0167 NC_009850.1 168226 168537 D Pfam match to PF03091 CutA1, score 132.3, E-value 1E-037; periplasmic protein 168226..168537 Arcobacter butzleri RM4018 5624877 YP_001489121.1 CDS thiG NC_009850.1 168534 169313 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 168534..169313 Arcobacter butzleri RM4018 5624878 YP_001489122.1 CDS pycB1 NC_009850.1 170234 172066 R Pfam matches to PF00364 Biotin_lipoyl, score 83.9, E-value 4.4E-022, and to PF00682 HMGL-like, score -49.1, E-value 6.8E-005; pyruvate/oxaloacetate carboxyltransferase complement(170234..172066) Arcobacter butzleri RM4018 5624782 YP_001489123.1 CDS Abu_0177 NC_009850.1 172073 172339 R hypothetical protein complement(172073..172339) Arcobacter butzleri RM4018 5624783 YP_001489124.1 CDS Abu_0178 NC_009850.1 172487 173362 D Pfam matches to PF06445 AraC_E_bind, score 64.2, E-value 3.8E-016, and to PF00165 HTH_AraC, score 40.5, E-value 5.2E-009; AraC family transcriptional regulator 172487..173362 Arcobacter butzleri RM4018 5624784 YP_001489125.1 CDS Abu_0179 NC_009850.1 173409 174389 D Pfam match to PF01699 Na_Ca_ex, score 167.1, E-value 4.2E-047; calcium:sodium antiporter 173409..174389 Arcobacter butzleri RM4018 5624785 YP_001489126.1 CDS Abu_0180 NC_009850.1 174410 176431 R Pfam match to PF00015 MCPsignal, score 164.2, E-value 3E-046; methyl-accepting chemotaxis protein complement(174410..176431) Arcobacter butzleri RM4018 5624786 YP_001489127.1 CDS Abu_0181 NC_009850.1 176536 179310 D Pfam matches to PF04851 ResIII, score 178.2, E-value 1.9E-050, and to PF00271 Helicase_C, score 46.1, E-value 5.6E-015; DNA/RNA helicase 176536..179310 Arcobacter butzleri RM4018 5624787 YP_001489128.1 CDS tkt NC_009850.1 179388 181307 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 179388..181307 Arcobacter butzleri RM4018 5624788 YP_001489129.1 CDS lrgA NC_009850.1 181425 181778 D Pfam match to PF03788 LrgA, score 63.9, E-value 4.8E-016; LrgA family protein 181425..181778 Arcobacter butzleri RM4018 5623864 YP_001489130.1 CDS lrgB NC_009850.1 181768 182490 D Pfam match to PF04172 LrgB, score 270.7, E-value 2.6E-078; LrgB-like protein 181768..182490 Arcobacter butzleri RM4018 5623865 YP_001489131.1 CDS Abu_0185 NC_009850.1 182505 182858 D hypothetical protein 182505..182858 Arcobacter butzleri RM4018 5623866 YP_001489132.1 CDS Abu_0186 NC_009850.1 182873 183277 R Pfam match to PF03994 DUF350, score 31.5, E-value 2.8E-006; hypothetical protein complement(182873..183277) Arcobacter butzleri RM4018 5623867 YP_001489133.1 CDS dctA NC_009850.1 183341 184786 R Pfam match to PF00375 SDF, score 317, E-value 3.1E-092; C4-dicarboxylate transport protein complement(183341..184786) Arcobacter butzleri RM4018 5623868 YP_001489134.1 CDS Abu_0188 NC_009850.1 184871 185509 D hypothetical protein 184871..185509 Arcobacter butzleri RM4018 5623869 YP_001489135.1 CDS Abu_0189 NC_009850.1 185509 185883 D hypothetical protein 185509..185883 Arcobacter butzleri RM4018 5623870 YP_001489136.1 CDS Abu_0190 NC_009850.1 185873 186523 D Pfam match to PF01066 CDP-OH_P_transf, score 32.3, E-value 1.6E-006; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase-related protein 185873..186523 Arcobacter butzleri RM4018 5623871 YP_001489137.1 CDS Abu_0191 NC_009850.1 186523 187455 D Pfam match to PF01148 CTP_transf_1, score 276.5, E-value 4.9E-080; CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 186523..187455 Arcobacter butzleri RM4018 5623872 YP_001489138.1 CDS Abu_0192 NC_009850.1 187457 188083 D Pfam match to PF01553 Acyltransferase, score 65.2, E-value 7.2E-018; 1-acyl-sn-glycerol-3-phosphate acyltransferase 187457..188083 Arcobacter butzleri RM4018 5623873 YP_001489139.1 CDS aas NC_009850.1 188095 191577 D Pfam matches to PF00501 AMP-binding, score 238.2, E-value 1.6E-068, and to PF01553 Acyltransferase, score 94.1, E-value 5.5E-026, and to PF07690 MFS_1, score 41, E-value 2.5E-011; 2-acyl-glycerophospho-ethanolamine acyltransferase 188095..191577 Arcobacter butzleri RM4018 5623874 YP_001489140.1 CDS glnD NC_009850.1 191582 194113 R Pfam matches to PF08335 GlnD_UR_UTase, score 52.5, E-value 5.3E-013, and to PF01966 HD, score 35.5, E-value 1.6E-007; protein-P-II uridylyltransferase complement(191582..194113) Arcobacter butzleri RM4018 5624811 YP_001489141.1 CDS Abu_0195 NC_009850.1 194110 194862 R Pfam match to PF02954 HTH_8, score 22.9, E-value 1.7E-005; hypothetical protein complement(194110..194862) Arcobacter butzleri RM4018 5624812 YP_001489142.1 CDS Abu_0196 NC_009850.1 194924 195793 R hypothetical protein complement(194924..195793) Arcobacter butzleri RM4018 5624813 YP_001489143.1 CDS Abu_0197 NC_009850.1 195863 197797 R Pfam match to PF00023 Ank, score 28.6, E-value 5.2E-007; ankyrin repeat-containing protein complement(195863..197797) Arcobacter butzleri RM4018 5624814 YP_001489144.1 CDS glnB1 NC_009850.1 197999 198337 D Pfam match to PF00543 P-II, score 232.3, E-value 9.7E-076; nitrogen regulatory protein PII 197999..198337 Arcobacter butzleri RM4018 5624815 YP_001489145.1 CDS pyrC NC_009850.1 198338 199363 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 198338..199363 Arcobacter butzleri RM4018 5624816 YP_001489146.1 CDS fliM NC_009850.1 199381 200487 R with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM complement(199381..200487) Arcobacter butzleri RM4018 5624817 YP_001489147.1 CDS flgI NC_009850.1 200491 201540 R Pfam match to PF02119 FlgI, score 265.3, E-value 1.1E-076; flagellar P-ring protein FlgI complement(200491..201540) Arcobacter butzleri RM4018 5624818 YP_001489148.1 CDS Abu_0202 NC_009850.1 201645 202937 D hypothetical protein 201645..202937 Arcobacter butzleri RM4018 5624819 YP_001489149.1 CDS fliQ NC_009850.1 202940 203200 D Pfam match to PF01313 Bac_export_3, score 83.3, E-value 7E-022; flagellar basal body protein FliQ 202940..203200 Arcobacter butzleri RM4018 5624820 YP_001489150.1 CDS Abu_0204 NC_009850.1 203202 203606 D hypothetical protein 203202..203606 Arcobacter butzleri RM4018 5624821 YP_001489151.1 CDS Abu_0205 NC_009850.1 203615 204106 D hypothetical protein 203615..204106 Arcobacter butzleri RM4018 5623738 YP_001489152.1 CDS fliL NC_009850.1 204108 204635 D Pfam match to PF03748 FliL, score 70, E-value 6.7E-018; flagellar basal body-associated protein 204108..204635 Arcobacter butzleri RM4018 5623739 YP_001489153.1 CDS Abu_0207 NC_009850.1 204635 205063 D hypothetical protein 204635..205063 Arcobacter butzleri RM4018 5623740 YP_001489154.1 CDS flgH NC_009850.1 205060 205764 D Pfam match to PF02107 FlgH, score 95.6, E-value 1.3E-025; flagellar basal body L-ring protein FlgH 205060..205764 Arcobacter butzleri RM4018 5623741 YP_001489155.1 CDS flgK NC_009850.1 205818 207728 D Pfam matches to PF06429 DUF1078, score 45.5, E-value 1.6E-010, and to PF00460 Flg_bb_rod, score 40.6, E-value 4.8E-009; flagellar hook-associated protein FlgK 205818..207728 Arcobacter butzleri RM4018 5623742 YP_001489156.1 CDS fliD NC_009850.1 207749 209086 D Pfam matches to PF07195 FliD_C, score 76.5, E-value 7.8E-020, and to PF02465 FliD_N, score 41.3, E-value 3.1E-009; flagellar hook-associated protein 2 207749..209086 Arcobacter butzleri RM4018 5623743 YP_001489157.1 CDS fliS NC_009850.1 209158 209514 D flagellin specific chaperone; flagellar protein FliS 209158..209514 Arcobacter butzleri RM4018 5623744 YP_001489158.1 CDS Abu_0212 NC_009850.1 209490 209759 D hypothetical protein 209490..209759 Arcobacter butzleri RM4018 5623745 YP_001489159.1 CDS tilS NC_009850.1 209748 210728 R Pfam match to PF01171 ATP_bind_3, score 223, E-value 6.1E-064; tRNA(Ile)-lysidine synthase complement(209748..210728) Arcobacter butzleri RM4018 5623746 YP_001489160.1 CDS yliG NC_009850.1 210731 212071 R Pfam matches to PF00919 UPF0004, score 144.6, E-value 2.4E-040, and to PF04055 Radical_SAM, score 76, E-value 1.1E-019; MiaB-like tRNA modifying enzyme complement(210731..212071) Arcobacter butzleri RM4018 5623747 YP_001489161.1 CDS panC NC_009850.1 212139 212957 R Pfam match to PF02569 Pantoate_ligase, score 462.5, E-value 4.9E-136; pantoate--beta-alanine ligase complement(212139..212957) Arcobacter butzleri RM4018 5623748 YP_001489162.1 CDS Abu_0216 NC_009850.1 212977 213936 R Pfam match to PF00528 BPD_transp_1, score 154.1, E-value 3.4E-043; oligopeptide ABC transporter, permease complement(212977..213936) Arcobacter butzleri RM4018 5624356 YP_001489163.1 CDS acpS NC_009850.1 213966 214322 D Pfam match to PF01648 ACPS, score 56.5, E-value 7.9E-014; holo-(acyl-carrier-protein) synthase 213966..214322 Arcobacter butzleri RM4018 5624357 YP_001489164.1 CDS gltS NC_009850.1 214357 215583 R Pfam match to PF03616 Glt_symporter, score 680.5, E-value 1.1E-201; sodium:glutamate symporter complement(214357..215583) Arcobacter butzleri RM4018 5624358 YP_001489165.1 CDS Abu_0219 NC_009850.1 215607 215987 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(215607..215987) Arcobacter butzleri RM4018 5624359 YP_001489166.1 CDS metF NC_009850.1 215984 216895 R Pfam match to PF02219 MTHFR, score -39.4, E-value 4.1E-011; 5,10-methylenetetrahydrofolate reductase complement(215984..216895) Arcobacter butzleri RM4018 5624360 YP_001489167.1 CDS serB NC_009850.1 216976 217602 D Pfam match to PF00702 Hydrolase, score 77.7, E-value 8.1E-022; 3-phosphoserine phosphatase 216976..217602 Arcobacter butzleri RM4018 5624361 YP_001489168.1 CDS tal NC_009850.1 217605 218597 D Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase 217605..218597 Arcobacter butzleri RM4018 5624362 YP_001489169.1 CDS dhs NC_009850.1 218665 220017 D Pfam match to PF01474 DAHP_synth_2, score 863.2, E-value 1.2E-256; 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase (DAHP synthetase class II) 218665..220017 Arcobacter butzleri RM4018 5624363 YP_001489170.1 CDS tsx NC_009850.1 220083 220925 D Pfam match to PF03502 Channel_Tsx, score 145.8, E-value 1.1E-040; nucleoside-specific channel-forming protein 220083..220925 Arcobacter butzleri RM4018 5624364 YP_001489171.1 CDS Abu_0227 NC_009850.1 224501 225496 D DNA binding protein 224501..225496 Arcobacter butzleri RM4018 5624366 YP_001489172.1 CDS Abu_0228 NC_009850.1 225491 225832 R Pfam match to PF03960 ArsC, score 110.6, E-value 4.3E-030; hypothetical protein complement(225491..225832) Arcobacter butzleri RM4018 5623638 YP_001489173.1 CDS gatC NC_009850.1 225983 226273 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(225983..226273) Arcobacter butzleri RM4018 5623639 YP_001489174.1 CDS tgt NC_009850.1 226317 227438 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(226317..227438) Arcobacter butzleri RM4018 5623640 YP_001489175.1 CDS Abu_0231 NC_009850.1 227540 228982 D Pfam match to PF02080 TrkA_C, score 41.5, E-value 2.7E-009; hypothetical protein 227540..228982 Arcobacter butzleri RM4018 5623641 YP_001489176.1 CDS aspB2 NC_009850.1 228992 230122 D Pfam match to PF00155 Aminotran_1_2, score 82.4, E-value 6.7E-023; hypothetical protein 228992..230122 Arcobacter butzleri RM4018 5623642 YP_001489177.1 CDS Abu_0233 NC_009850.1 230115 230699 D hypothetical protein 230115..230699 Arcobacter butzleri RM4018 5623643 YP_001489178.1 CDS murC NC_009850.1 230699 232006 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 230699..232006 Arcobacter butzleri RM4018 5623708 YP_001489179.1 CDS dprA NC_009850.1 232015 232791 R Pfam match to PF02481 SMF, score 106.1, E-value 9.4E-029; SMF protein, DNA processing chain A complement(232015..232791) Arcobacter butzleri RM4018 5623709 YP_001489180.1 CDS Abu_0236 NC_009850.1 232834 233913 R Pfam match to PF04748 Polysacc_deac_2, score 199.5, E-value 7.2E-057; hypothetical protein complement(232834..233913) Arcobacter butzleri RM4018 5623710 YP_001489181.1 CDS ilvC NC_009850.1 233955 234977 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(233955..234977) Arcobacter butzleri RM4018 5623711 YP_001489182.1 CDS rnr NC_009850.1 235102 236955 D Pfam match to PF00773 RNB, score 249.9, E-value 4.9E-072; ribonuclease R 235102..236955 Arcobacter butzleri RM4018 5623712 YP_001489183.1 CDS Abu_0239 NC_009850.1 236945 237322 R Pfam match to PF02623 DUF180, score 26.4, E-value 5.4E-007; hypothetical protein complement(236945..237322) Arcobacter butzleri RM4018 5623713 YP_001489184.1 CDS Abu_0240 NC_009850.1 237387 238367 D required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 237387..238367 Arcobacter butzleri RM4018 5623714 YP_001489185.1 CDS rpsF NC_009850.1 238455 238811 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 238455..238811 Arcobacter butzleri RM4018 5623715 YP_001489186.1 CDS ssb NC_009850.1 238832 239344 D Pfam match to PF00436 SSB, score 90.8, E-value 3.8E-024; single-strand DNA binding protein 238832..239344 Arcobacter butzleri RM4018 5623716 YP_001489187.1 CDS rpsR NC_009850.1 239359 239625 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 239359..239625 Arcobacter butzleri RM4018 5623717 YP_001489188.1 CDS Abu_0244 NC_009850.1 239698 239898 D hypothetical protein 239698..239898 Arcobacter butzleri RM4018 5623644 YP_001489189.1 CDS cysS NC_009850.1 239893 241296 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(239893..241296) Arcobacter butzleri RM4018 5623590 YP_001489190.1 CDS nusA NC_009850.1 241301 242476 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(241301..242476) Arcobacter butzleri RM4018 5623591 YP_001489191.1 CDS Abu_0247 NC_009850.1 242630 242872 D hypothetical protein 242630..242872 Arcobacter butzleri RM4018 5623592 YP_001489192.1 CDS miaB NC_009850.1 242894 244204 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 242894..244204 Arcobacter butzleri RM4018 5623593 YP_001489193.1 CDS Abu_0249 NC_009850.1 244207 244821 D Pfam match to PF04028 DUF374, score 99.1, E-value 1.2E-026; lipoprotein 244207..244821 Arcobacter butzleri RM4018 5623594 YP_001489194.1 CDS Abu_0250 NC_009850.1 244832 246400 D hypothetical protein 244832..246400 Arcobacter butzleri RM4018 5623595 YP_001489195.1 CDS Abu_0251 NC_009850.1 246413 247474 R Pfam match to PF04055 Radical_SAM, score 77.9, E-value 2.9E-020; hypothetical protein complement(246413..247474) Arcobacter butzleri RM4018 5623596 YP_001489196.1 CDS Abu_0252 NC_009850.1 247480 247797 R hypothetical protein complement(247480..247797) Arcobacter butzleri RM4018 5623597 YP_001489197.1 CDS cynT2 NC_009850.1 247802 248440 R Pfam match to PF00484 Pro_CA, score 166.3, E-value 7.1E-047; carbonic anhydrase complement(247802..248440) Arcobacter butzleri RM4018 5623598 YP_001489198.1 CDS bioF NC_009850.1 248427 249533 R Pfam match to PF00155 Aminotran_1_2, score 78.2, E-value 1E-021; 8-amino-7-oxononanoate synthase complement(248427..249533) Arcobacter butzleri RM4018 5623599 YP_001489199.1 CDS Abu_0255 NC_009850.1 249711 250043 R Pfam match to PF02021 UPF0102, score 54.7, E-value 2.8E-013; hypothetical protein complement(249711..250043) Arcobacter butzleri RM4018 5623600 YP_001489200.1 CDS Abu_0256 NC_009850.1 250048 250248 R Pfam match to PF02597 ThiS, score 58, E-value 2.9E-014; hypothetical protein complement(250048..250248) Arcobacter butzleri RM4018 5624946 YP_001489201.1 CDS Abu_0257 NC_009850.1 250310 251035 R Pfam matches to PF00691 OmpA, score 77, E-value 5.3E-020, and to PF05433 Rick_17kDa_Anti, score 42.6, E-value 1.2E-009; OmpA domain-containing protein complement(250310..251035) Arcobacter butzleri RM4018 5624947 YP_001489202.1 CDS pyk NC_009850.1 251161 252636 D Pfam matches to PF00224 PK, score 492.1, E-value 1.2E-147, and to PF02887 PK_C, score 33.5, E-value 1.8E-008; pyruvate kinase 251161..252636 Arcobacter butzleri RM4018 5624948 YP_001489203.1 CDS argD1 NC_009850.1 252655 253845 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(252655..253845) Arcobacter butzleri RM4018 5624949 YP_001489204.1 CDS cti NC_009850.1 253905 256226 R Pfam match to PF06934 CTI, score 688.1, E-value 5.9E-204; fatty acid cis/trans isomerase complement(253905..256226) Arcobacter butzleri RM4018 5624950 YP_001489205.1 CDS pyrB NC_009850.1 256322 257209 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 256322..257209 Arcobacter butzleri RM4018 5624951 YP_001489206.1 CDS pabB NC_009850.1 257206 258165 D catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; para-aminobenzoate synthase component I 257206..258165 Arcobacter butzleri RM4018 5624952 YP_001489207.1 CDS Abu_0263 NC_009850.1 258228 258785 D Pfam match to PF00857 Isochorismatase, score 12.7, E-value 1.8E-008; isochorismatase hydrolase 258228..258785 Arcobacter butzleri RM4018 5624953 YP_001489208.1 CDS Abu_0264 NC_009850.1 258790 259461 D Pfam match to PF00486 Trans_reg_C, score 21.3, E-value 3.2E-005; two-component response regulator 258790..259461 Arcobacter butzleri RM4018 5624954 YP_001489209.1 CDS Abu_0265 NC_009850.1 259478 260056 D hypothetical protein 259478..260056 Arcobacter butzleri RM4018 5624955 YP_001489210.1 CDS phnA NC_009850.1 260053 260607 R Pfam matches to PF03831 PhnA, score 93.1, E-value 7.7E-025, and to PF08274 PhnA_Zn_Ribbon, score 43, E-value 9.3E-010; phosphonoacetate hydrolase complement(260053..260607) Arcobacter butzleri RM4018 5624956 YP_001489211.1 CDS Abu_0267 NC_009850.1 260665 261156 D metal-dependent hydrolase 260665..261156 Arcobacter butzleri RM4018 5624957 YP_001489212.1 CDS Abu_0268 NC_009850.1 261177 261926 D Pfam match to PF01925 DUF81, score 163.5, E-value 5E-046; membrane protein, permease 261177..261926 Arcobacter butzleri RM4018 5624958 YP_001489213.1 CDS Abu_0269 NC_009850.1 261999 262565 D Pfam match to PF04982 HPP, score 110.5, E-value 4.4E-030; hypothetical protein 261999..262565 Arcobacter butzleri RM4018 5624959 YP_001489214.1 CDS Abu_0270 NC_009850.1 262568 263773 R Pfam match to PF03734 ErfK_YbiS_YhnG, score 49.8, E-value 8.6E-012; periplasmic protein complement(262568..263773) Arcobacter butzleri RM4018 5624960 YP_001489215.1 CDS Abu_0271 NC_009850.1 263887 265086 D hypothetical protein 263887..265086 Arcobacter butzleri RM4018 5624961 YP_001489216.1 CDS Abu_0272 NC_009850.1 265093 266082 D periplasmic protein 265093..266082 Arcobacter butzleri RM4018 5624962 YP_001489217.1 CDS Abu_0273 NC_009850.1 266079 266201 D hypothetical protein 266079..266201 Arcobacter butzleri RM4018 5624963 YP_001489218.1 CDS Abu_0274 NC_009850.1 266185 267117 R Pfam matches to PF02826 2-Hacid_dh_C, score 212.9, E-value 6.8E-061, and to PF00389 2-Hacid_dh, score 69.8, E-value 1.2E-019; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding complement(266185..267117) Arcobacter butzleri RM4018 5624964 YP_001489219.1 CDS Abu_0275 NC_009850.1 267133 268110 R hypothetical protein complement(267133..268110) Arcobacter butzleri RM4018 5624965 YP_001489220.1 CDS prpB NC_009850.1 268288 269175 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 268288..269175 Arcobacter butzleri RM4018 5624966 YP_001489221.1 CDS prpC NC_009850.1 269232 270377 D catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 269232..270377 Arcobacter butzleri RM4018 5624967 YP_001489222.1 CDS acnA NC_009850.1 270479 273070 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 270479..273070 Arcobacter butzleri RM4018 5624267 YP_001489223.1 CDS Abu_0279 NC_009850.1 273160 274335 D Pfam match to PF04303 DUF453, score 740, E-value 1.4E-219; hypothetical protein 273160..274335 Arcobacter butzleri RM4018 5624268 YP_001489224.1 CDS Abu_0280 NC_009850.1 274409 274900 D hypothetical protein 274409..274900 Arcobacter butzleri RM4018 5624269 YP_001489225.1 CDS Abu_0281 NC_009850.1 274929 275471 R Pfam match to PF00857 Isochorismatase, score -18.7, E-value 6.8E-006; isochorismatase hydrolase complement(274929..275471) Arcobacter butzleri RM4018 5624270 YP_001489226.1 CDS Abu_0282 NC_009850.1 275531 277279 R hypothetical protein complement(275531..277279) Arcobacter butzleri RM4018 5624271 YP_001489227.1 CDS hemC NC_009850.1 277305 278243 R Pfam matches to PF01379 Porphobil_deam, score 397.4, E-value 2E-116, and to PF03900 Porphobil_deamC, score 70.3, E-value 5.7E-018; porphobilinogen deaminase complement(277305..278243) Arcobacter butzleri RM4018 5624272 YP_001489228.1 CDS Abu_0284 NC_009850.1 278259 279089 R Pfam match to PF01323 DSBA, score 9.9, E-value 1.5E-005; DSBA oxidoreductase complement(278259..279089) Arcobacter butzleri RM4018 5624273 YP_001489229.1 CDS dnaX NC_009850.1 279151 281082 R Pfam match to PF00004 AAA, score 32.4, E-value 1.3E-009; DNA polymerase III, gamma and tau subunits complement(279151..281082) Arcobacter butzleri RM4018 5624274 YP_001489230.1 CDS murI NC_009850.1 281079 281864 R Pfam match to PF01177 Asp_Glu_race, score 219.5, E-value 6.8E-063; glutamate racemase complement(281079..281864) Arcobacter butzleri RM4018 5624275 YP_001489231.1 CDS gdhA NC_009850.1 282089 283441 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(282089..283441) Arcobacter butzleri RM4018 5624276 YP_001489232.1 CDS rho NC_009850.1 283581 284903 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(283581..284903) Arcobacter butzleri RM4018 5624277 YP_001489233.1 CDS tsaA NC_009850.1 285063 285659 R Pfam match to PF00578 AhpC-TSA, score 325.3, E-value 9.9E-095; alkyl hydroperoxide reductase/ Thiol specific antioxidant complement(285063..285659) Arcobacter butzleri RM4018 5623987 YP_001489234.1 CDS fdxA NC_009850.1 285865 286137 D Pfam match to PF00037 Fer4, score 25.7, E-value 3E-005; ferredoxin 285865..286137 Arcobacter butzleri RM4018 5623988 YP_001489235.1 CDS ndk NC_009850.1 286249 286662 D Pfam match to PF00334 NDK, score 279.7, E-value 5.3E-081; nucleoside diphosphate kinase 286249..286662 Arcobacter butzleri RM4018 5623989 YP_001489236.1 CDS Abu_0292 NC_009850.1 286690 287067 D hypothetical protein 286690..287067 Arcobacter butzleri RM4018 5623990 YP_001489237.1 CDS rpmF NC_009850.1 287079 287231 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 287079..287231 Arcobacter butzleri RM4018 5623991 YP_001489238.1 CDS plsX NC_009850.1 287231 288232 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 287231..288232 Arcobacter butzleri RM4018 5623992 YP_001489239.1 CDS fabH NC_009850.1 288259 289260 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 288259..289260 Arcobacter butzleri RM4018 5623993 YP_001489240.1 CDS Abu_0296 NC_009850.1 289277 289711 R hypothetical protein complement(289277..289711) Arcobacter butzleri RM4018 5623994 YP_001489241.1 CDS Abu_0297 NC_009850.1 289713 291737 R Pfam match to PF00350 Dynamin_N, score 113, E-value 7.6E-031; ATP/GTP-binding protein complement(289713..291737) Arcobacter butzleri RM4018 5623995 YP_001489242.1 CDS Abu_0298 NC_009850.1 291737 294088 R Pfam match to PF00350 Dynamin_N, score 140, E-value 5.8E-039; ATP/GTP-binding protein complement(291737..294088) Arcobacter butzleri RM4018 5623996 YP_001489243.1 CDS frdB NC_009850.1 294188 294919 R part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit complement(294188..294919) Arcobacter butzleri RM4018 5623997 YP_001489244.1 CDS frdA NC_009850.1 294919 296904 R part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit complement(294919..296904) Arcobacter butzleri RM4018 5624800 YP_001489245.1 CDS frdC NC_009850.1 296904 297704 R part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit complement(296904..297704) Arcobacter butzleri RM4018 5624801 YP_001489246.1 CDS nuoN NC_009850.1 297902 299422 R Pfam match to PF00361 Oxidored_q1, score 192.1, E-value 8.5E-056; NADH-quinone oxidoreductase, N subunit complement(297902..299422) Arcobacter butzleri RM4018 5624802 YP_001489247.1 CDS nuoM NC_009850.1 299419 300906 R Pfam match to PF00361 Oxidored_q1, score 196.1, E-value 5.9E-057; NADH-quinone oxidoreductase, M subunit complement(299419..300906) Arcobacter butzleri RM4018 5624803 YP_001489248.1 CDS nuoL NC_009850.1 300908 302794 R Pfam matches to PF00361 Oxidored_q1, score 322.2, E-value 8.4E-094, and to PF00662 Oxidored_q1_N, score 79, E-value 1.4E-020; NADH-quinone oxidoreductase, L subunit complement(300908..302794) Arcobacter butzleri RM4018 5624804 YP_001489249.1 CDS nuoK NC_009850.1 302796 303107 R Pfam match to PF00420 Oxidored_q2, score 89.8, E-value 7.5E-024; NADH-quinone oxidoreductase, K subunit complement(302796..303107) Arcobacter butzleri RM4018 5624805 YP_001489250.1 CDS nuoJ NC_009850.1 303111 303632 R Pfam match to PF00499 Oxidored_q3, score 107.5, E-value 3.6E-029; NADH-quinone oxidoreductase, J subunit complement(303111..303632) Arcobacter butzleri RM4018 5624806 YP_001489251.1 CDS nuoI NC_009850.1 303632 304132 R Pfam match to PF00037 Fer4, score 32.9, E-value 1E-006; NADH-quinone oxidoreductase, I subunit complement(303632..304132) Arcobacter butzleri RM4018 5624807 YP_001489252.1 CDS nuoH NC_009850.1 304134 305408 R Pfam match to PF00146 NADHdh, score 338.9, E-value 8.1E-099; NADH-quinone oxidoreductase, H subunit complement(304134..305408) Arcobacter butzleri RM4018 5624808 YP_001489253.1 CDS nuoG NC_009850.1 305405 306841 R Pfam match to PF00111 Fer2, score 35, E-value 5.5E-009; NADH-quinone oxidoreductase, G subunit complement(305405..306841) Arcobacter butzleri RM4018 5624809 YP_001489254.1 CDS gltA NC_009850.1 306878 308164 R Pfam match to PF00285 Citrate_synt, score 541.9, E-value 6.2E-160; citrate synthase complement(306878..308164) Arcobacter butzleri RM4018 5624810 YP_001489255.1 CDS nuoF NC_009850.1 308189 309439 R Pfam match to PF01512 Complex1_51K, score 349.9, E-value 3.9E-102; NADH-quinone oxidoreductase, F subunit complement(308189..309439) Arcobacter butzleri RM4018 5624548 YP_001489256.1 CDS nuoE NC_009850.1 309429 309914 R Pfam match to PF01257 Complex1_24kDa, score 232, E-value 1.2E-066; NADH-quinone oxidoreductase, E subunit complement(309429..309914) Arcobacter butzleri RM4018 5624549 YP_001489257.1 CDS nuoCD NC_009850.1 309914 311548 R Pfam matches to PF00346 Complex1_49kDa, score 278.5, E-value 3.7E-096, and to PF00329 Complex1_30kDa, score 99.1, E-value 1.2E-026; NADH-quinone oxidoreductase, C/D subunit complement(309914..311548) Arcobacter butzleri RM4018 5624550 YP_001489258.1 CDS nuoB NC_009850.1 311541 312056 R Pfam match to PF01058 Oxidored_q6, score 170.9, E-value 2.9E-048; NADH-quinone oxidoreductase, B subunit complement(311541..312056) Arcobacter butzleri RM4018 5624551 YP_001489259.1 CDS nuoA NC_009850.1 312047 312409 R Pfam match to PF00507 Oxidored_q4, score 116.7, E-value 5.9E-032; NADH-quinone oxidoreductase, A subunit complement(312047..312409) Arcobacter butzleri RM4018 5624552 YP_001489260.1 CDS Abu_0316 NC_009850.1 312542 313708 R Pfam match to PF00155 Aminotran_1_2, score 101.4, E-value 3.3E-028; aminotransferase/L-cysteine desulfhydrase complement(312542..313708) Arcobacter butzleri RM4018 5624553 YP_001489261.1 CDS Abu_0317 NC_009850.1 313793 315604 D Pfam match to PF01977 UbiD, score 503.1, E-value 2.9E-148; carboxylyase-related protein 313793..315604 Arcobacter butzleri RM4018 5624554 YP_001489262.1 CDS Abu_0318 NC_009850.1 315626 316093 R hypothetical protein complement(315626..316093) Arcobacter butzleri RM4018 5624555 YP_001489263.1 CDS Abu_0319 NC_009850.1 316095 316868 R Pfam match to PF06738 DUF1212, score 166, E-value 8.7E-047; hypothetical protein complement(316095..316868) Arcobacter butzleri RM4018 5624556 YP_001489264.1 CDS Abu_0320 NC_009850.1 316929 317261 D hypothetical protein 316929..317261 Arcobacter butzleri RM4018 5624557 YP_001489265.1 CDS Abu_0321 NC_009850.1 317230 317874 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 317230..317874 Arcobacter butzleri RM4018 5624558 YP_001489266.1 CDS hisG NC_009850.1 317852 318460 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 317852..318460 Arcobacter butzleri RM4018 5624789 YP_001489267.1 CDS Abu_0323 NC_009850.1 318460 319152 D Pfam match to PF08242 Methyltransf_12, score 50.5, E-value 5.3E-012; methyltransferase 318460..319152 Arcobacter butzleri RM4018 5624790 YP_001489268.1 CDS Abu_0324 NC_009850.1 319275 321203 D Pfam match to PF00015 MCPsignal, score 136, E-value 9.4E-038; methyl-accepting chemotaxis protein 319275..321203 Arcobacter butzleri RM4018 5624791 YP_001489269.1 CDS Abu_0325 NC_009850.1 321178 322050 D Pfam match to PF06977 SdiA-regulated, score 49, E-value 1.5E-011; hypothetical protein 321178..322050 Arcobacter butzleri RM4018 5624792 YP_001489270.1 CDS Abu_0326 NC_009850.1 322146 322751 D hypothetical protein 322146..322751 Arcobacter butzleri RM4018 5624793 YP_001489271.1 CDS trpS NC_009850.1 322769 323734 R Pfam match to PF00579 tRNA-synt_1b, score 187.6, E-value 2.8E-053; tryptophanyl-tRNA synthetase complement(322769..323734) Arcobacter butzleri RM4018 5624794 YP_001489272.1 CDS Abu_0328 NC_009850.1 323774 325879 R Pfam matches to PF00593 TonB_dep_Rec, score 101.5, E-value 2.3E-027, and to PF07715 Plug, score 67.1, E-value 5.2E-017; TonB-dependent receptor protein complement(323774..325879) Arcobacter butzleri RM4018 5624795 YP_001489273.1 CDS Abu_0329 NC_009850.1 326001 327164 R hypothetical protein complement(326001..327164) Arcobacter butzleri RM4018 5624796 YP_001489274.1 CDS Abu_0330 NC_009850.1 327248 328423 R Pfam match to PF07690 MFS_1, score 94.5, E-value 2.9E-026; major facilitator superfamily AmpG-like permease complement(327248..328423) Arcobacter butzleri RM4018 5624797 YP_001489275.1 CDS Abu_0331 NC_009850.1 328427 329416 R Pfam match to PF08242 Methyltransf_12, score 53.2, E-value 8E-013; O-methyltransferase complement(328427..329416) Arcobacter butzleri RM4018 5624798 YP_001489276.1 CDS Abu_0332 NC_009850.1 329419 329643 R hypothetical protein complement(329419..329643) Arcobacter butzleri RM4018 5624799 YP_001489277.1 CDS Abu_0333 NC_009850.1 329652 331721 R Pfam matches to PF00593 TonB_dep_Rec, score 86.1, E-value 1E-022, and to PF07715 Plug, score 68.4, E-value 2.1E-017; TonB-dependent receptor protein complement(329652..331721) Arcobacter butzleri RM4018 5623149 YP_001489278.1 CDS Abu_0334 NC_009850.1 331763 332692 D transcriptional regulator 331763..332692 Arcobacter butzleri RM4018 5623150 YP_001489279.1 CDS Abu_0335 NC_009850.1 332681 333220 R Pfam match to PF02659 DUF204, score 70.3, E-value 5.8E-018; hypothetical protein complement(332681..333220) Arcobacter butzleri RM4018 5623151 YP_001489280.1 CDS Abu_0336 NC_009850.1 333214 334389 R Pfam match to PF07690 MFS_1, score 159.7, E-value 7.1E-045; major facilitator superfamily transporter complement(333214..334389) Arcobacter butzleri RM4018 5623152 YP_001489281.1 CDS Abu_0337 NC_009850.1 334386 335594 R Pfam match to PF07690 MFS_1, score 67.7, E-value 8.6E-019; major facilitator superfamily transporter complement(334386..335594) Arcobacter butzleri RM4018 5623153 YP_001489282.1 CDS Abu_0338 NC_009850.1 335591 337372 R Pfam matches to PF00005 ABC_tran, score 208, E-value 2E-059, and to PF00664 ABC_membrane, score 34, E-value 8.3E-009; ABC transporter, ATP-binding/permease complement(335591..337372) Arcobacter butzleri RM4018 5623154 YP_001489283.1 CDS Abu_0339 NC_009850.1 337365 339158 R Pfam matches to PF00005 ABC_tran, score 210.6, E-value 3.3E-060, and to PF00664 ABC_membrane, score 36.2, E-value 2.2E-009; ABC transporter, ATP-binding/permease complement(337365..339158) Arcobacter butzleri RM4018 5623155 YP_001489284.1 CDS Abu_0340 NC_009850.1 339261 341348 R Pfam matches to PF00593 TonB_dep_Rec, score 86.1, E-value 9.6E-023, and to PF07715 Plug, score 76.7, E-value 6.5E-020; TonB-dependent receptor protein complement(339261..341348) Arcobacter butzleri RM4018 5623156 YP_001489285.1 CDS Abu_0341 NC_009850.1 341462 342424 D Pfam match to PF00165 HTH_AraC, score 26.4, E-value 9.1E-005; AraC family transcriptional regulator 341462..342424 Arcobacter butzleri RM4018 5623157 YP_001489286.1 CDS Abu_0342 NC_009850.1 342451 344481 R Pfam matches to PF00593 TonB_dep_Rec, score 93.2, E-value 7E-025, and to PF07715 Plug, score 36.2, E-value 1E-007; TonB-dependent receptor protein complement(342451..344481) Arcobacter butzleri RM4018 5623158 YP_001489287.1 CDS Abu_0343 NC_009850.1 344649 344948 D hypothetical protein 344649..344948 Arcobacter butzleri RM4018 5623159 YP_001489288.1 CDS Abu_0344 NC_009850.1 344960 346015 D Pfam match to PF01545 Cation_efflux, score 295.2, E-value 1.1E-085; cation efflux system, membrane protein 344960..346015 Arcobacter butzleri RM4018 5624526 YP_001489289.1 CDS serS NC_009850.1 346070 347308 D Pfam matches to PF00587 tRNA-synt_2b, score 227.1, E-value 3.5E-065, and to PF02403 Seryl_tRNA_N, score 91, E-value 3.3E-024; seryl-tRNA synthetase 346070..347308 Arcobacter butzleri RM4018 5624527 YP_001489290.1 CDS nrfI NC_009850.1 347580 350705 R Pfam match to PF01578 Cytochrom_C_asm, score 146.5, E-value 6.5E-041; cytochrome c biogenesis protein complement(347580..350705) Arcobacter butzleri RM4018 5624528 YP_001489291.1 CDS nrfA NC_009850.1 350755 352245 R catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 complement(350755..352245) Arcobacter butzleri RM4018 5624529 YP_001489292.1 CDS nrfH NC_009850.1 352259 352789 R Pfam match to PF03264 Cytochrom_NNT, score 94.8, E-value 2.4E-025; cytochrome c nitrite reductase, small subunit NrfH complement(352259..352789) Arcobacter butzleri RM4018 5624530 YP_001489293.1 CDS Abu_0349 NC_009850.1 352914 353300 R hypothetical protein complement(352914..353300) Arcobacter butzleri RM4018 5624531 YP_001489294.1 CDS Abu_0350 NC_009850.1 353307 354923 R Pfam matches to PF00563 EAL, score 233.5, E-value 4.2E-067, and to PF00990 GGDEF, score 38.4, E-value 9.4E-011, and to PF08448 PAS_4, score 35.5, E-value 1.6E-007; EAL/GGDEF/PAS domain-containing protein complement(353307..354923) Arcobacter butzleri RM4018 5624532 YP_001489295.1 CDS Abu_0351 NC_009850.1 355015 355458 R Pfam match to PF08447 PAS_3, score 53, E-value 5.4E-014; methyl-accepting chemotaxis protein complement(355015..355458) Arcobacter butzleri RM4018 5624533 YP_001489296.1 CDS napD NC_009850.1 355460 355843 R Pfam match to PF03927 NapD, score 27, E-value 4.5E-006; periplasmic nitrate reductase assembly protein NapD complement(355460..355843) Arcobacter butzleri RM4018 5624534 YP_001489297.1 CDS napL NC_009850.1 355845 356804 R periplasmic protein complement(355845..356804) Arcobacter butzleri RM4018 5624535 YP_001489298.1 CDS napF NC_009850.1 356813 357289 R Pfam match to PF00037 Fer4, score 30.3, E-value 5.7E-006; ferredoxin-type protein NapF complement(356813..357289) Arcobacter butzleri RM4018 5624536 YP_001489299.1 CDS napB NC_009850.1 357289 357894 R Pfam match to PF03892 NapB, score 87.9, E-value 2.9E-023; periplasmic nitrate reductase, small subunit, cytochrome c-type protein NapB complement(357289..357894) Arcobacter butzleri RM4018 5623258 YP_001489300.1 CDS napH NC_009850.1 357896 358702 R part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component complement(357896..358702) Arcobacter butzleri RM4018 5623259 YP_001489301.1 CDS napG NC_009850.1 358699 359511 R part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component complement(358699..359511) Arcobacter butzleri RM4018 5623260 YP_001489302.1 CDS napA NC_009850.1 359529 362339 R periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit complement(359529..362339) Arcobacter butzleri RM4018 5623261 YP_001489303.1 CDS dctP NC_009850.1 362606 363598 D Pfam match to PF03480 SBP_bac_7, score 419.7, E-value 3.8E-123; C4-dicarboxylate-binding periplasmic protein 362606..363598 Arcobacter butzleri RM4018 5623262 YP_001489304.1 CDS dctQ NC_009850.1 363612 364157 D Pfam match to PF04290 DctQ, score 144.5, E-value 2.6E-040; C4-dicarboxylate transport system, permease small subunit 363612..364157 Arcobacter butzleri RM4018 5623263 YP_001489305.1 CDS dctM NC_009850.1 364160 365440 D Pfam match to PF06808 DctM, score 532.1, E-value 5.4E-157; C4-dicarboxylate transport protein 364160..365440 Arcobacter butzleri RM4018 5623264 YP_001489306.1 CDS Abu_0362 NC_009850.1 365467 367029 R Pfam match to PF02518 HATPase_c, score 69.3, E-value 1.1E-017; two-component sensor histidine kinase complement(365467..367029) Arcobacter butzleri RM4018 5623265 YP_001489307.1 CDS Abu_0363 NC_009850.1 367096 367794 D Pfam matches to PF00072 Response_reg, score 82.6, E-value 7.2E-025, and to PF00486 Trans_reg_C, score 33.2, E-value 8.4E-007; two-component response regulator 367096..367794 Arcobacter butzleri RM4018 5623266 YP_001489308.1 CDS menG NC_009850.1 367813 368295 R Pfam match to PF03737 Methyltransf_6, score 113.2, E-value 7.1E-031; S-adenosylmethionine:2-demethylmenaquinone methyltransferase complement(367813..368295) Arcobacter butzleri RM4018 5623267 YP_001489309.1 CDS cysG NC_009850.1 368451 369182 R Pfam match to PF00590 TP_methylase, score 265.7, E-value 8.7E-077; non-fusion protein; does not contain precorrin-2 dehydrogenase or sirohydrochlorin ferrochelatase activity; uroporphyrin III C-methyltransferase complement(368451..369182) Arcobacter butzleri RM4018 5623268 YP_001489310.1 CDS Abu_0366 NC_009850.1 369238 370239 R hypothetical protein complement(369238..370239) Arcobacter butzleri RM4018 5625257 YP_001489311.1 CDS Abu_0367 NC_009850.1 370236 370901 R Pfam match to PF00027 cNMP_binding, score 37.2, E-value 5.3E-008; transcriptional regulator complement(370236..370901) Arcobacter butzleri RM4018 5625258 YP_001489312.1 CDS Abu_0368 NC_009850.1 370987 371904 D Pfam match to PF02885 Glycos_trans_3N, score 51.9, E-value 2E-012; glycosyltransferase 370987..371904 Arcobacter butzleri RM4018 5625259 YP_001489313.1 CDS moaA NC_009850.1 371920 372891 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 371920..372891 Arcobacter butzleri RM4018 5625260 YP_001489314.1 CDS rpsO NC_009850.1 372988 373260 D Pfam match to PF00312 Ribosomal_S15, score 118.9, E-value 9.5E-034; 30S ribosomal protein S15 372988..373260 Arcobacter butzleri RM4018 5625261 YP_001489315.1 CDS Abu_0371 NC_009850.1 373389 373787 D Pfam match to PF02082 Rrf2, score 113.1, E-value 4.4E-034; BadM/Rrf2 family transcriptional regulator 373389..373787 Arcobacter butzleri RM4018 5625262 YP_001489316.1 CDS Abu_0372 NC_009850.1 373787 374824 D hypothetical protein 373787..374824 Arcobacter butzleri RM4018 5625263 YP_001489317.1 CDS Abu_0373 NC_009850.1 374835 375266 D Pfam match to PF02629 CoA_binding, score 45.6, E-value 1.6E-012; CoA-binding domain-containing protein 374835..375266 Arcobacter butzleri RM4018 5625264 YP_001489318.1 CDS Abu_0374 NC_009850.1 375263 376540 R Pfam matches to PF02518 HATPase_c, score 75.7, E-value 1.3E-019, and to PF00512 HisKA, score 46.2, E-value 1E-010, and to PF00672 HAMP, score 37.1, E-value 5.7E-008; two-component sensor histidine kinase complement(375263..376540) Arcobacter butzleri RM4018 5625265 YP_001489319.1 CDS Abu_0375 NC_009850.1 376565 377245 R Pfam matches to PF00072 Response_reg, score 116.6, E-value 2.8E-035, and to PF00486 Trans_reg_C, score 78, E-value 2.7E-020; two-component response regulator complement(376565..377245) Arcobacter butzleri RM4018 5625266 YP_001489320.1 CDS ppiC NC_009850.1 377442 378251 D Pfam match to PF00639 Rotamase, score 91, E-value 3.4E-024; peptidyl-prolyl cis-trans isomerase 377442..378251 Arcobacter butzleri RM4018 5625267 YP_001489321.1 CDS fba NC_009850.1 378262 379329 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 378262..379329 Arcobacter butzleri RM4018 5624846 YP_001489322.1 CDS ald NC_009850.1 379481 380977 D Pfam match to PF00171 Aldedh, score 701.9, E-value 4.1E-208; aldehyde dehydrogenase 379481..380977 Arcobacter butzleri RM4018 5624847 YP_001489323.1 CDS Abu_0379 NC_009850.1 381031 381420 D Pfam match to PF05610 DUF779, score 128.1, E-value 2.2E-035; hypothetical protein 381031..381420 Arcobacter butzleri RM4018 5624848 YP_001489324.1 CDS exbD1 NC_009850.1 381421 381810 R Pfam match to PF02472 ExbD, score 87.4, E-value 4.1E-023; biopolymer transport protein ExbD complement(381421..381810) Arcobacter butzleri RM4018 5624849 YP_001489325.1 CDS exbB1 NC_009850.1 381810 382283 R Pfam match to PF01618 MotA_ExbB, score 59.5, E-value 1E-014; biopolymer transport protein ExbB complement(381810..382283) Arcobacter butzleri RM4018 5624850 YP_001489326.1 CDS Abu_0382 NC_009850.1 382302 383210 D hypothetical protein 382302..383210 Arcobacter butzleri RM4018 5624851 YP_001489327.1 CDS aroK NC_009850.1 383297 383773 D Pfam match to PF01202 SKI, score 115.2, E-value 1.7E-031; shikimate kinase 383297..383773 Arcobacter butzleri RM4018 5624852 YP_001489328.1 CDS hisD NC_009850.1 383775 385067 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 383775..385067 Arcobacter butzleri RM4018 5624853 YP_001489329.1 CDS Abu_0385 NC_009850.1 385077 385379 D hypothetical protein 385077..385379 Arcobacter butzleri RM4018 5624854 YP_001489330.1 CDS ispB NC_009850.1 385390 386289 D Pfam match to PF00348 polyprenyl_synt, score 136.9, E-value 5.1E-038; octaprenyl-diphosphate synthase 385390..386289 Arcobacter butzleri RM4018 5624855 YP_001489331.1 CDS hemA NC_009850.1 386289 387587 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 386289..387587 Arcobacter butzleri RM4018 5624856 YP_001489332.1 CDS proS NC_009850.1 387604 389310 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 387604..389310 Arcobacter butzleri RM4018 5624714 YP_001489333.1 CDS mscS NC_009850.1 389322 390212 D Pfam match to PF00924 MS_channel, score 234.2, E-value 2.6E-067; mechanosensitive ion channel 389322..390212 Arcobacter butzleri RM4018 5624715 YP_001489334.1 CDS Abu_0390 NC_009850.1 390424 391398 D Pfam match to PF01743 PolyA_pol, score 120.4, E-value 4.8E-033; tRNA nucleotidyltransferase/poly(A) polymerase 390424..391398 Arcobacter butzleri RM4018 5624716 YP_001489335.1 CDS Abu_0391 NC_009850.1 391455 391895 D hypothetical protein 391455..391895 Arcobacter butzleri RM4018 5624717 YP_001489336.1 CDS Abu_0392 NC_009850.1 391879 393678 D hypothetical protein 391879..393678 Arcobacter butzleri RM4018 5624718 YP_001489337.1 CDS lnt NC_009850.1 393688 394920 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(393688..394920) Arcobacter butzleri RM4018 5624719 YP_001489338.1 CDS yajC NC_009850.1 394949 395212 D Pfam match to PF02699 YajC, score 131, E-value 3E-036; preprotein translocase subunit 394949..395212 Arcobacter butzleri RM4018 5624720 YP_001489339.1 CDS secD NC_009850.1 395279 396844 D Pfam match to PF02355 SecD_SecF, score -26.1, E-value 6.5E-007; protein-export membrane protein SecD 395279..396844 Arcobacter butzleri RM4018 5624721 YP_001489340.1 CDS secF NC_009850.1 396844 397812 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 396844..397812 Arcobacter butzleri RM4018 5624722 YP_001489341.1 CDS Abu_0397 NC_009850.1 397881 398060 D hypothetical protein 397881..398060 Arcobacter butzleri RM4018 5624723 YP_001489342.1 CDS Abu_0398 NC_009850.1 398053 398457 R hypothetical protein complement(398053..398457) Arcobacter butzleri RM4018 5624724 YP_001489343.1 CDS motB NC_009850.1 398463 399218 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(398463..399218) Arcobacter butzleri RM4018 5624636 YP_001489344.1 CDS motA NC_009850.1 399222 399980 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(399222..399980) Arcobacter butzleri RM4018 5624637 YP_001489345.1 CDS Abu_0401 NC_009850.1 400128 400472 D hypothetical protein 400128..400472 Arcobacter butzleri RM4018 5624638 YP_001489346.1 CDS leuS NC_009850.1 400472 402937 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 400472..402937 Arcobacter butzleri RM4018 5624639 YP_001489347.1 CDS Abu_0403 NC_009850.1 402940 403464 D hypothetical protein 402940..403464 Arcobacter butzleri RM4018 5624640 YP_001489348.1 CDS folC NC_009850.1 403467 404639 D bifunctional folylpolyglutamate synthase/dihydrofolate synthase 403467..404639 Arcobacter butzleri RM4018 5624641 YP_001489349.1 CDS Abu_0405 NC_009850.1 404626 406746 D Pfam matches to PF04851 ResIII, score 99, E-value 1.3E-026, and to PF00271 Helicase_C, score 45.4, E-value 9.9E-015; helicase 404626..406746 Arcobacter butzleri RM4018 5624642 YP_001489350.1 CDS Abu_0406 NC_009850.1 406747 408450 R Pfam match to PF01553 Acyltransferase, score 32.2, E-value 1.3E-008; phospholipid/glycerol acyltransferase, hemolysin complement(406747..408450) Arcobacter butzleri RM4018 5624643 YP_001489351.1 CDS Abu_0407 NC_009850.1 408556 409263 D hypothetical protein 408556..409263 Arcobacter butzleri RM4018 5624644 YP_001489352.1 CDS Abu_0408 NC_009850.1 409281 409658 R hypothetical protein complement(409281..409658) Arcobacter butzleri RM4018 5624645 YP_001489353.1 CDS Abu_0409 NC_009850.1 409789 410094 D hypothetical protein 409789..410094 Arcobacter butzleri RM4018 5624646 YP_001489354.1 CDS mfd NC_009850.1 410094 413081 D Pfam matches to PF00270 DEAD, score 126.4, E-value 7.5E-035, and to PF02559 CarD_TRCF, score 120.6, E-value 4.1E-033, and to PF03461 TRCF, score 99.5, E-value 9E-027, and to PF00271 Helicase_C, score 71.7, E-value 1.5E-023; transcription-repair coupling factor 410094..413081 Arcobacter butzleri RM4018 5623875 YP_001489355.1 CDS Abu_0411 NC_009850.1 413093 413611 D Pfam match to PF00583 Acetyltransf_1, score 39.4, E-value 1.1E-008; acetyltransferase 413093..413611 Arcobacter butzleri RM4018 5623876 YP_001489356.1 CDS Abu_0412 NC_009850.1 413608 414549 R Pfam match to PF03372 Exo_endo_phos, score 36.3, E-value 4.6E-010; hypothetical protein complement(413608..414549) Arcobacter butzleri RM4018 5623877 YP_001489357.1 CDS Abu_0413 NC_009850.1 414654 415100 D periplasmic protein 414654..415100 Arcobacter butzleri RM4018 5623878 YP_001489358.1 CDS ompR NC_009850.1 415134 415814 D Pfam matches to PF00072 Response_reg, score 118.1, E-value 9.6E-036, and to PF00486 Trans_reg_C, score 52.4, E-value 1.4E-012; two-component response regulator 415134..415814 Arcobacter butzleri RM4018 5623879 YP_001489359.1 CDS Abu_0415 NC_009850.1 415811 417046 D Pfam match to PF02518 HATPase_c, score 24.6, E-value 1.5E-006; two-component sensor histidine kinase 415811..417046 Arcobacter butzleri RM4018 5623880 YP_001489360.1 CDS Abu_0416 NC_009850.1 417092 418198 D Pfam match to PF03486 HI0933_like, score 248.6, E-value 1.2E-071; hypothetical protein 417092..418198 Arcobacter butzleri RM4018 5623881 YP_001489361.1 CDS Abu_0417 NC_009850.1 418249 419661 D Pfam match to PF00015 MCPsignal, score 137, E-value 4.8E-038; methyl-accepting chemotaxis protein 418249..419661 Arcobacter butzleri RM4018 5623882 YP_001489362.1 CDS Abu_0418 NC_009850.1 419654 420031 D Pfam match to PF00072 Response_reg, score 108.6, E-value 8.3E-033; two-component response regulator 419654..420031 Arcobacter butzleri RM4018 5623883 YP_001489363.1 CDS Abu_0419 NC_009850.1 420032 422074 D Pfam match to PF08447 PAS_3, score 63.8, E-value 5.9E-017; two-component sensor histidine kinase 420032..422074 Arcobacter butzleri RM4018 5623884 YP_001489364.1 CDS Abu_0420 NC_009850.1 422071 424494 D Pfam matches to PF02518 HATPase_c, score 69.6, E-value 8.8E-018, and to PF00989 PAS, score 43.6, E-value 1.1E-012, and to PF00512 HisKA, score 36.7, E-value 7.1E-008, and to PF00989 PAS, score 22.5, E-value 2.5E-006; two-component sensor histidine kinase 422071..424494 Arcobacter butzleri RM4018 5623885 YP_001489365.1 CDS Abu_0421 NC_009850.1 424495 425307 D Pfam match to PF00149 Metallophos, score 41.3, E-value 3E-009; hypothetical protein 424495..425307 Arcobacter butzleri RM4018 5623185 YP_001489366.1 CDS Abu_0422 NC_009850.1 425354 426148 D hypothetical protein 425354..426148 Arcobacter butzleri RM4018 5623186 YP_001489367.1 CDS Abu_0423 NC_009850.1 426145 426393 D hypothetical protein 426145..426393 Arcobacter butzleri RM4018 5623187 YP_001489368.1 CDS ubiE NC_009850.1 426531 427241 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 426531..427241 Arcobacter butzleri RM4018 5623188 YP_001489369.1 CDS xseA NC_009850.1 427266 428453 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 427266..428453 Arcobacter butzleri RM4018 5623189 YP_001489370.1 CDS cheW NC_009850.1 428527 429006 D Pfam match to PF01584 CheW, score 85.3, E-value 1.8E-022; chemotaxis protein CheW 428527..429006 Arcobacter butzleri RM4018 5623190 YP_001489371.1 CDS Abu_0427 NC_009850.1 429034 429567 R Pfam match to PF00160 Pro_isomerase, score 206.1, E-value 7.3E-059; peptidyl-prolyl cis-trans isomerase-like protein complement(429034..429567) Arcobacter butzleri RM4018 5623191 YP_001489372.1 CDS panD NC_009850.1 429721 430104 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 429721..430104 Arcobacter butzleri RM4018 5623192 YP_001489373.1 CDS Abu_0429 NC_009850.1 430097 430417 D Pfam match to PF02575 DUF149, score 99.8, E-value 7.7E-027; hypothetical protein 430097..430417 Arcobacter butzleri RM4018 5623193 YP_001489374.1 CDS ispA NC_009850.1 430422 431282 D Pfam match to PF00348 polyprenyl_synt, score 251, E-value 2.3E-072; geranyltranstransferase 430422..431282 Arcobacter butzleri RM4018 5623194 YP_001489375.1 CDS groES NC_009850.1 431419 431676 D Pfam match to PF00166 Cpn10, score 135.9, E-value 1E-037; 10 kDa chaperonin 431419..431676 Arcobacter butzleri RM4018 5623195 YP_001489376.1 CDS groEL NC_009850.1 431676 433310 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 431676..433310 Arcobacter butzleri RM4018 5623196 YP_001489377.1 CDS Abu_0433 NC_009850.1 433660 435036 R Pfam matches to PF02518 HATPase_c, score 122.1, E-value 1.4E-033, and to PF00512 HisKA, score 65.1, E-value 2.1E-016, and to PF00672 HAMP, score 36.1, E-value 1.1E-007; two-component sensor histidine kinase complement(433660..435036) Arcobacter butzleri RM4018 5623645 YP_001489378.1 CDS Abu_0434 NC_009850.1 435026 435703 R Pfam matches to PF00072 Response_reg, score 131.1, E-value 1.1E-039, and to PF00486 Trans_reg_C, score 66.7, E-value 6.7E-017; two-component response regulator complement(435026..435703) Arcobacter butzleri RM4018 5623646 YP_001489379.1 CDS Abu_0435 NC_009850.1 435700 436431 R Pfam match to PF00149 Metallophos, score 59.2, E-value 1.2E-014; Ser/Thr protein phosphatase complement(435700..436431) Arcobacter butzleri RM4018 5623647 YP_001489380.1 CDS Abu_0436 NC_009850.1 436428 436883 R hypothetical protein complement(436428..436883) Arcobacter butzleri RM4018 5623648 YP_001489381.1 CDS Abu_0437 NC_009850.1 436887 437411 R periplasmic protein complement(436887..437411) Arcobacter butzleri RM4018 5623649 YP_001489382.1 CDS Abu_0438 NC_009850.1 437404 438369 R hypothetical protein complement(437404..438369) Arcobacter butzleri RM4018 5623650 YP_001489383.1 CDS Abu_0439 NC_009850.1 438357 439928 R hypothetical protein complement(438357..439928) Arcobacter butzleri RM4018 5623651 YP_001489384.1 CDS Abu_0440 NC_009850.1 439912 440535 R Pfam match to PF00005 ABC_tran, score 213.2, E-value 5.5E-061; ABC transporter, ATP-binding protein complement(439912..440535) Arcobacter butzleri RM4018 5623652 YP_001489385.1 CDS Abu_0441 NC_009850.1 440532 441614 R Pfam match to PF02687 FtsX, score 120.8, E-value 3.4E-033; ABC transporter, permease complement(440532..441614) Arcobacter butzleri RM4018 5623653 YP_001489386.1 CDS Abu_0442 NC_009850.1 441706 442293 R Pfam match to PF03692 UPF0153, score 45.6, E-value 1.6E-010; hypothetical protein complement(441706..442293) Arcobacter butzleri RM4018 5623654 YP_001489387.1 CDS suhB NC_009850.1 442328 443101 D Pfam match to PF00459 Inositol_P, score 240, E-value 4.6E-069; inositol-1-monophosphatase 442328..443101 Arcobacter butzleri RM4018 5623655 YP_001489388.1 CDS glmS NC_009850.1 443151 444953 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 443151..444953 Arcobacter butzleri RM4018 5623656 YP_001489389.1 CDS metK NC_009850.1 445082 446341 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 445082..446341 Arcobacter butzleri RM4018 5624514 YP_001489390.1 CDS accD NC_009850.1 446443 447306 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 446443..447306 Arcobacter butzleri RM4018 5624515 YP_001489391.1 CDS thiE NC_009850.1 447310 447921 D Pfam match to PF02581 TMP-TENI, score 60.4, E-value 4.3E-020; thiamine-phosphate pyrophosphorylase 447310..447921 Arcobacter butzleri RM4018 5624516 YP_001489392.1 CDS Abu_0448 NC_009850.1 447887 448366 D Pfam match to PF02590 DUF163, score 133.8, E-value 9.7E-055; hypothetical protein 447887..448366 Arcobacter butzleri RM4018 5624517 YP_001489393.1 CDS Abu_0449 NC_009850.1 448426 449433 D hypothetical protein 448426..449433 Arcobacter butzleri RM4018 5624518 YP_001489394.1 CDS Abu_0450 NC_009850.1 449434 450363 D Pfam match to PF01207 Dus, score 290.2, E-value 3.7E-084; tRNA-dihydrouridine synthase 449434..450363 Arcobacter butzleri RM4018 5624519 YP_001489395.1 CDS prmA NC_009850.1 450445 451263 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 450445..451263 Arcobacter butzleri RM4018 5624520 YP_001489396.1 CDS ftsH1 NC_009850.1 451268 453253 D Pfam matches to PF00004 AAA, score 318.8, E-value 4.1E-096, and to PF01434 Peptidase_M41, score 326.4, E-value 4.6E-095, and to PF06480 FtsH_ext, score 129.7, E-value 7.2E-036; cell division protein FtsH 451268..453253 Arcobacter butzleri RM4018 5624521 YP_001489397.1 CDS Abu_0453 NC_009850.1 453372 455198 D Pfam matches to PF00072 Response_reg, score 108.1, E-value 1.1E-032, and to PF01966 HD, score 105.3, E-value 1.6E-028, and to PF08447 PAS_3, score 52.1, E-value 9.9E-014, and to PF00989 PAS, score 39.4, E-value 2.1E-011; two-component response regulator 453372..455198 Arcobacter butzleri RM4018 5624522 YP_001489398.1 CDS Abu_0454 NC_009850.1 455185 455592 D Pfam match to PF00072 Response_reg, score 108.5, E-value 8.6E-033; two-component response regulator 455185..455592 Arcobacter butzleri RM4018 5624523 YP_001489399.1 CDS Abu_0455 NC_009850.1 455594 458167 D Pfam matches to PF02518 HATPase_c, score 99.3, E-value 1E-026, and to PF00672 HAMP, score 58.6, E-value 1.8E-014; two-component sensor histidine kinase 455594..458167 Arcobacter butzleri RM4018 5624524 YP_001489400.1 CDS leuA1 NC_009850.1 458444 459997 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 458444..459997 Arcobacter butzleri RM4018 5624525 YP_001489401.1 CDS Abu_0457 NC_009850.1 460037 460369 D hypothetical protein 460037..460369 Arcobacter butzleri RM4018 5625071 YP_001489402.1 CDS Abu_0458 NC_009850.1 460366 460785 D hypothetical protein 460366..460785 Arcobacter butzleri RM4018 5625177 YP_001489403.1 CDS mutS1 NC_009850.1 460764 463742 D Pfam matches to PF00488 MutS_V, score 106.8, E-value 5.8E-029, and to PF05192 MutS_III, score 62.8, E-value 1.1E-015, and to PF01624 MutS_I, score 32.7, E-value 8.4E-009; mismatch repair ATPase 460764..463742 Arcobacter butzleri RM4018 5625178 YP_001489404.1 CDS Abu_0460 NC_009850.1 463782 466808 R Pfam match to PF00873 ACR_tran, score 866.5, E-value 1.2E-257; outer membrane component of efflux system complement(463782..466808) Arcobacter butzleri RM4018 5625179 YP_001489405.1 CDS Abu_0461 NC_009850.1 466810 467502 R Pfam match to PF00529 HlyD, score 23, E-value 7.8E-006; membrane fusion component of efflux system complement(466810..467502) Arcobacter butzleri RM4018 5625180 YP_001489406.1 CDS Abu_0462 NC_009850.1 467504 468724 R Pfam match to PF02321 OEP, score 47.4, E-value 4.3E-011; outer membrane component of efflux system complement(467504..468724) Arcobacter butzleri RM4018 5625181 YP_001489407.1 CDS Abu_0463 NC_009850.1 468735 469331 R Pfam match to PF00440 TetR_N, score 31.1, E-value 2.9E-008; hypothetical protein complement(468735..469331) Arcobacter butzleri RM4018 5625072 YP_001489408.1 CDS Abu_0464 NC_009850.1 469422 470234 R hypothetical protein complement(469422..470234) Arcobacter butzleri RM4018 5625231 YP_001489409.1 CDS Abu_0465 NC_009850.1 470416 472023 D quinohemoprotein amine dehydrogenase, 60 kDa subunit 470416..472023 Arcobacter butzleri RM4018 5625320 YP_001489410.1 CDS Abu_0466 NC_009850.1 472033 473406 D Pfam match to PF04055 Radical_SAM, score 70.4, E-value 5.3E-018; quinohemoprotein amine dehydrogenase, SAM-radical dependent activating subunit 472033..473406 Arcobacter butzleri RM4018 5625321 YP_001489411.1 CDS Abu_0467 NC_009850.1 473417 473737 D quinohemoprotein amine dehydrogenase, 9 kDa subunit 473417..473737 Arcobacter butzleri RM4018 5625322 YP_001489412.1 CDS Abu_0468 NC_009850.1 473755 474888 D quinohemoprotein amine dehydrogenase, 40 kDa subunit 473755..474888 Arcobacter butzleri RM4018 5625323 YP_001489413.1 CDS Abu_0469 NC_009850.1 474903 476540 D Pfam matches to PF00005 ABC_tran, score 140.3, E-value 4.9E-039, and to PF00664 ABC_membrane, score 115.2, E-value 1.7E-031; ABC transporter, ATP-binding protein 474903..476540 Arcobacter butzleri RM4018 5625324 YP_001489414.1 CDS Abu_0470 NC_009850.1 476533 477162 D hypothetical protein 476533..477162 Arcobacter butzleri RM4018 5625325 YP_001489415.1 CDS Abu_0471 NC_009850.1 477159 478484 D Pfam match to PF01266 DAO, score 31, E-value 1.3E-008; hypothetical protein 477159..478484 Arcobacter butzleri RM4018 5625326 YP_001489416.1 CDS Abu_0472 NC_009850.1 478493 480352 R Pfam match to PF00990 GGDEF, score 192, E-value 1.3E-054; GGDEF domain-containing protein complement(478493..480352) Arcobacter butzleri RM4018 5625327 YP_001489417.1 CDS hisA NC_009850.1 480423 481130 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(480423..481130) Arcobacter butzleri RM4018 5625328 YP_001489418.1 CDS Abu_0474 NC_009850.1 481142 481993 R Pfam matches to PF08338 DUF1731, score 71.9, E-value 1.8E-018, and to PF01370 Epimerase, score 18.5, E-value 1.8E-007; hypothetical protein complement(481142..481993) Arcobacter butzleri RM4018 5625329 YP_001489419.1 CDS hisH1 NC_009850.1 482014 482622 R Pfam match to PF00117 GATase, score 131.9, E-value 1.6E-036; glutamine amidotransferase HisH complement(482014..482622) Arcobacter butzleri RM4018 5625330 YP_001489420.1 CDS ctsW NC_009850.1 482665 483237 R transformation system protein complement(482665..483237) Arcobacter butzleri RM4018 5625331 YP_001489421.1 CDS Abu_0477 NC_009850.1 483387 483794 D hypothetical protein 483387..483794 Arcobacter butzleri RM4018 5623683 YP_001489422.1 CDS lepA NC_009850.1 483936 485723 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(483936..485723) Arcobacter butzleri RM4018 5623684 YP_001489423.1 CDS Abu_0479 NC_009850.1 485898 486164 D Pfam match to PF02583 DUF156, score 70, E-value 7.2E-018; hypothetical protein 485898..486164 Arcobacter butzleri RM4018 5623685 YP_001489424.1 CDS Abu_0480 NC_009850.1 486176 488695 D Pfam matches to PF00122 E1-E2_ATPase, score 352.3, E-value 1.4E-106, and to PF00702 Hydrolase, score 125.1, E-value 2.5E-035, and to PF00403 HMA; heavy-metal transporting P-type ATPase 486176..488695 Arcobacter butzleri RM4018 5623686 YP_001489425.1 CDS cadF NC_009850.1 488761 489777 R Pfam match to PF00691 OmpA, score 131.5, E-value 2.1E-036; outer membrane fibronectin-binding protein complement(488761..489777) Arcobacter butzleri RM4018 5623687 YP_001489426.1 CDS prsA NC_009850.1 489857 490789 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(489857..490789) Arcobacter butzleri RM4018 5623688 YP_001489427.1 CDS Abu_0483 NC_009850.1 491053 492234 D hypothetical protein 491053..492234 Arcobacter butzleri RM4018 5623689 YP_001489428.1 CDS mnmA NC_009850.1 492280 493317 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(492280..493317) Arcobacter butzleri RM4018 5623690 YP_001489429.1 CDS trmU2 NC_009850.1 493329 494432 R Pfam match to PF03054 tRNA_Me_trans, score 568.7, E-value 3.6E-172; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase complement(493329..494432) Arcobacter butzleri RM4018 5623691 YP_001489430.1 CDS folK NC_009850.1 494480 494965 R Pfam match to PF01288 HPPK, score 123.9, E-value 4.1E-034; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(494480..494965) Arcobacter butzleri RM4018 5623692 YP_001489431.1 CDS pepQ NC_009850.1 494996 496021 R Pfam match to PF00557 Peptidase_M24, score 149.1, E-value 1.1E-041; prolidase (Xaa-Pro dipeptidase) (pepQ) complement(494996..496021) Arcobacter butzleri RM4018 5623693 YP_001489432.1 CDS aroQ NC_009850.1 496099 496593 D Pfam match to PF01220 DHquinase_II, score 258.2, E-value 1.6E-074; 3-dehydroquinate dehydratase 496099..496593 Arcobacter butzleri RM4018 5623694 YP_001489433.1 CDS Abu_0489 NC_009850.1 496541 497821 D Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase 496541..497821 Arcobacter butzleri RM4018 5624593 YP_001489434.1 CDS pspA NC_009850.1 497814 498698 D Pfam match to PF01343 Peptidase_S49, score 204.8, E-value 1.8E-058; protease IV (PspA) 497814..498698 Arcobacter butzleri RM4018 5624594 YP_001489435.1 CDS Abu_0491 NC_009850.1 498781 499443 R hypothetical protein complement(498781..499443) Arcobacter butzleri RM4018 5624595 YP_001489436.1 CDS ackA1 NC_009850.1 499680 500894 R Pfam match to PF00871 Acetate_kinase, score 692, E-value 4.9E-211; acetate kinase complement(499680..500894) Arcobacter butzleri RM4018 5624596 YP_001489437.1 CDS pta NC_009850.1 500921 501916 R Pfam match to PF01515 PTA_PTB, score 517.1, E-value 1.8E-152; phosphate acetyltransferase complement(500921..501916) Arcobacter butzleri RM4018 5624597 YP_001489438.1 CDS ackA2 NC_009850.1 502160 503350 R Pfam match to PF00871 Acetate_kinase, score 697.6, E-value 9.2E-213; acetate kinase complement(502160..503350) Arcobacter butzleri RM4018 5624598 YP_001489439.1 CDS Abu_0495 NC_009850.1 503454 504392 R Pfam match to PF01545 Cation_efflux, score 8.6, E-value 2.6E-009; cation efflux protein complement(503454..504392) Arcobacter butzleri RM4018 5624599 YP_001489440.1 CDS ackA3 NC_009850.1 504450 505640 R Pfam match to PF00871 Acetate_kinase, score 680.8, E-value 1.2E-207; acetate kinase complement(504450..505640) Arcobacter butzleri RM4018 5624600 YP_001489441.1 CDS dnaQ1 NC_009850.1 505661 506269 R Pfam match to PF00929 Exonuc_X-T, score 100.8, E-value 3.7E-027; DNA polymerase III, epsilon subunit complement(505661..506269) Arcobacter butzleri RM4018 5624601 YP_001489442.1 CDS Abu_0498 NC_009850.1 506262 508103 R Pfam matches to PF03445 DUF294, score 204, E-value 3.2E-058, and to PF00571 CBS, score 57.2, E-value 4.7E-015, and to PF00027 cNMP_binding, score 49.8, E-value 8.5E-012; hypothetical protein complement(506262..508103) Arcobacter butzleri RM4018 5624602 YP_001489443.1 CDS Abu_0499 NC_009850.1 508154 509821 R Pfam match to PF00474 SSF, score 451.9, E-value 7.6E-133; sodium:solute symporter family protein complement(508154..509821) Arcobacter butzleri RM4018 5624603 YP_001489444.1 CDS Abu_0500 NC_009850.1 509821 510135 R Pfam match to PF04341 DUF485, score 100.1, E-value 6E-027; hypothetical protein complement(509821..510135) Arcobacter butzleri RM4018 5624604 YP_001489445.1 CDS Abu_0501 NC_009850.1 510362 512011 R Pfam match to PF00474 SSF, score 467.5, E-value 1.5E-137; sodium:solute symporter family protein complement(510362..512011) Arcobacter butzleri RM4018 5624822 YP_001489446.1 CDS Abu_0502 NC_009850.1 512011 512379 R Pfam match to PF04341 DUF485, score 114.6, E-value 2.5E-031; hypothetical protein complement(512011..512379) Arcobacter butzleri RM4018 5624823 YP_001489447.1 CDS dnaQ2 NC_009850.1 512451 513062 R Pfam match to PF00929 Exonuc_X-T, score 95, E-value 2E-025; DNA polymerase III, epsilon subunit complement(512451..513062) Arcobacter butzleri RM4018 5624824 YP_001489448.1 CDS Abu_0504 NC_009850.1 513062 514882 R Pfam matches to PF03445 DUF294, score 180.7, E-value 3.3E-051, and to PF00571 CBS, score 57.3, E-value 4.4E-015, and to PF00027 cNMP_binding, score 37.1, E-value 5.6E-008; cyclic nucleotide-binding domain-containing protein complement(513062..514882) Arcobacter butzleri RM4018 5624825 YP_001489449.1 CDS Abu_0505 NC_009850.1 514902 516671 R Pfam match to PF00474 SSF, score 66.4, E-value 3E-019; sodium/solute symporter family protein complement(514902..516671) Arcobacter butzleri RM4018 5624826 YP_001489450.1 CDS Abu_0506 NC_009850.1 516677 516931 R hypothetical protein complement(516677..516931) Arcobacter butzleri RM4018 5624827 YP_001489451.1 CDS Abu_0507 NC_009850.1 517007 517669 R Pfam matches to PF00072 Response_reg, score 80.2, E-value 4.1E-024, and to PF00486 Trans_reg_C, score 51.7, E-value 2.2E-012; two-component response regulator complement(517007..517669) Arcobacter butzleri RM4018 5624828 YP_001489452.1 CDS Abu_0508 NC_009850.1 517650 519233 R Pfam matches to PF02518 HATPase_c, score 51.2, E-value 3.1E-012, and to PF00512 HisKA, score 28.3, E-value 2.5E-005; two-component sensor histidine kinase complement(517650..519233) Arcobacter butzleri RM4018 5624829 YP_001489453.1 CDS Abu_0517 NC_009850.1 520163 520669 R Pfam match to PF02464 CinA, score 209.8, E-value 5.7E-060; CinA-like protein complement(520163..520669) Arcobacter butzleri RM4018 5625336 YP_001489454.1 CDS mqo NC_009850.1 520766 522124 R Pfam match to PF01266 DAO, score 44.9, E-value 1.5E-012; malate:quinone oxidoreductase complement(520766..522124) Arcobacter butzleri RM4018 5625337 YP_001489455.1 CDS ileS NC_009850.1 522392 525151 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 522392..525151 Arcobacter butzleri RM4018 5625338 YP_001489456.1 CDS Abu_0520 NC_009850.1 525275 525553 D Pfam match to PF01106 NifU, score 72, E-value 1.7E-018; NifU-like protein 525275..525553 Arcobacter butzleri RM4018 5625339 YP_001489457.1 CDS Abu_0521 NC_009850.1 525556 526152 D hypothetical protein 525556..526152 Arcobacter butzleri RM4018 5625340 YP_001489458.1 CDS murE NC_009850.1 526130 527419 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 526130..527419 Arcobacter butzleri RM4018 5625341 YP_001489459.1 CDS Abu_0523 NC_009850.1 527751 528728 D Pfam match to PF03595 C4dic_mal_tran, score 256.2, E-value 6.3E-074; C4-dicarboxylate transporter/malic acid transport protein 527751..528728 Arcobacter butzleri RM4018 5625342 YP_001489460.1 CDS tas NC_009850.1 528768 529787 D Pfam match to PF00248 Aldo_ket_red, score 184.6, E-value 2.2E-052; aldo/keto reductase family oxidoreductase TAS 528768..529787 Arcobacter butzleri RM4018 5625343 YP_001489461.1 CDS pitA NC_009850.1 529857 531344 D Pfam match to PF01384 PHO4, score 196.2, E-value 7E-056; phosphate transporter family protein 529857..531344 Arcobacter butzleri RM4018 5624255 YP_001489462.1 CDS Abu_0526 NC_009850.1 531631 534174 D Pfam matches to PF00015 MCPsignal, score 149.4, E-value 8.7E-042, and to PF00672 HAMP, score 52.8, E-value 1E-012; methyl-accepting chemotaxis protein 531631..534174 Arcobacter butzleri RM4018 5624256 YP_001489463.1 CDS Abu_0527 NC_009850.1 534237 534638 R hypothetical protein complement(534237..534638) Arcobacter butzleri RM4018 5624257 YP_001489464.1 CDS Abu_0528 NC_009850.1 534781 536682 R Pfam match to PF00015 MCPsignal, score 161.4, E-value 2.2E-045; methyl-accepting chemotaxis protein complement(534781..536682) Arcobacter butzleri RM4018 5624258 YP_001489465.1 CDS Abu_0529 NC_009850.1 536838 537200 D Pfam match to PF03061 4HBT, score 58.8, E-value 1.1E-015; hypothetical protein 536838..537200 Arcobacter butzleri RM4018 5624259 YP_001489466.1 CDS Abu_0530 NC_009850.1 537210 537680 D membrane-associated cation-independent thermostable nuclease; preferentially cleaves ss-DNA; involved in DNA transformation; nuclease NucT 537210..537680 Arcobacter butzleri RM4018 5624260 YP_001489467.1 CDS Abu_0531 NC_009850.1 537720 538940 D Pfam match to PF01435 Peptidase_M48, score 164, E-value 1.4E-048; M48 family peptidase 537720..538940 Arcobacter butzleri RM4018 5624261 YP_001489468.1 CDS Abu_0532 NC_009850.1 538937 540136 D Pfam match to PF02646 RmuC, score 408.3, E-value 1E-119; DNA recombination protein RmuC-like protein 538937..540136 Arcobacter butzleri RM4018 5624262 YP_001489469.1 CDS Abu_0533 NC_009850.1 540149 541048 R Pfam match to PF00892 DUF6, score 62.3, E-value 1.5E-015; integral membrane domain-containing protein complement(540149..541048) Arcobacter butzleri RM4018 5624263 YP_001489470.1 CDS moeA2 NC_009850.1 541048 542268 R Pfam matches to PF03453 MoeA_N, score 166.3, E-value 7.3E-047, and to PF00994 MoCF_biosynth, score 143.5, E-value 1.7E-041; molybdenum cofactor biosynthesis protein A complement(541048..542268) Arcobacter butzleri RM4018 5624264 YP_001489471.1 CDS Abu_0535 NC_009850.1 542279 542476 R hypothetical protein complement(542279..542476) Arcobacter butzleri RM4018 5624265 YP_001489472.1 CDS Abu_0536 NC_009850.1 542584 543369 D Pfam match to PF01171 ATP_bind_3, score 49, E-value 1.5E-011; hypothetical protein 542584..543369 Arcobacter butzleri RM4018 5624266 YP_001489473.1 CDS Abu_0537 NC_009850.1 543366 543866 D Pfam match to PF04463 DUF523, score 164.4, E-value 2.7E-046; hypothetical protein 543366..543866 Arcobacter butzleri RM4018 5623427 YP_001489474.1 CDS Abu_0538 NC_009850.1 543869 544108 R hypothetical protein complement(543869..544108) Arcobacter butzleri RM4018 5623428 YP_001489475.1 CDS Abu_0539 NC_009850.1 544092 544589 R hypothetical protein complement(544092..544589) Arcobacter butzleri RM4018 5623429 YP_001489476.1 CDS rpsB NC_009850.1 544832 545629 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 544832..545629 Arcobacter butzleri RM4018 5623430 YP_001489477.1 CDS tsf NC_009850.1 545629 546675 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 545629..546675 Arcobacter butzleri RM4018 5623431 YP_001489478.1 CDS Abu_0542 NC_009850.1 546721 547401 D Pfam match to PF00005 ABC_tran, score 166.6, E-value 5.9E-047; ABC transporter, ATP-binding protein 546721..547401 Arcobacter butzleri RM4018 5623432 YP_001489479.1 CDS Abu_0543 NC_009850.1 547398 548219 D hypothetical protein 547398..548219 Arcobacter butzleri RM4018 5623433 YP_001489480.1 CDS gmk NC_009850.1 548216 548833 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 548216..548833 Arcobacter butzleri RM4018 5623434 YP_001489481.1 CDS Abu_0545 NC_009850.1 548834 550459 R Pfam matches to PF00563 EAL, score 162.7, E-value 8.4E-046, and to PF00072 Response_reg, score 97.6, E-value 1.9E-029, and to PF00990 GGDEF, score -14, E-value 5.2E-006; EAL/GGDEF domain-containing protein complement(548834..550459) Arcobacter butzleri RM4018 5623435 YP_001489482.1 CDS Abu_0546 NC_009850.1 550556 552994 D Pfam matches to PF00122 E1-E2_ATPase, score 235.2, E-value 4.2E-071, and to PF00702 Hydrolase, score 89.6, E-value 3.3E-025; cation-transporting ATPase, P-type 550556..552994 Arcobacter butzleri RM4018 5623436 YP_001489483.1 CDS Abu_0547 NC_009850.1 553011 553238 D Pfam match to PF03597 CcoS, score 38.6, E-value 1.9E-008; hypothetical protein 553011..553238 Arcobacter butzleri RM4018 5623437 YP_001489484.1 CDS Abu_0548 NC_009850.1 553268 553558 R cytochrome c-553 complement(553268..553558) Arcobacter butzleri RM4018 5623438 YP_001489485.1 CDS Abu_0549 NC_009850.1 553758 554360 D Pfam match to PF00005 ABC_tran, score 156.8, E-value 5E-044; oligopeptide ABC transporter, ATP-binding protein 553758..554360 Arcobacter butzleri RM4018 5624559 YP_001489486.1 CDS hemH NC_009850.1 554347 555276 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 554347..555276 Arcobacter butzleri RM4018 5624560 YP_001489487.1 CDS feoB1 NC_009850.1 555304 557412 R Pfam matches to PF02421 FeoB_N, score 137.3, E-value 3.8E-038, and to PF01926 MMR_HSR1, score 121, E-value 3.1E-033, and to PF07664 FeoB_C, score 70.2, E-value 6.1E-018, and to PF07670 Gate, score 69.8, E-value 7.8E-018; ferrous iron transport protein B complement(555304..557412) Arcobacter butzleri RM4018 5624561 YP_001489488.1 CDS Abu_0552 NC_009850.1 557402 557629 R Pfam match to PF04023 FeoA, score 61, E-value 3.6E-015; hypothetical protein complement(557402..557629) Arcobacter butzleri RM4018 5624562 YP_001489489.1 CDS Abu_0553 NC_009850.1 557827 558573 D Pfam match to PF02698 DUF218, score 119, E-value 1.2E-032; hypothetical protein 557827..558573 Arcobacter butzleri RM4018 5624563 YP_001489490.1 CDS Abu_0554 NC_009850.1 558630 559370 D Pfam match to PF00005 ABC_tran, score 181.4, E-value 2E-051; ABC transporter, ATP-binding protein 558630..559370 Arcobacter butzleri RM4018 5624564 YP_001489491.1 CDS Abu_0555 NC_009850.1 559384 560184 D Pfam match to PF00950 ABC-3, score 272, E-value 1.1E-078; ABC transporter, permease 559384..560184 Arcobacter butzleri RM4018 5624565 YP_001489492.1 CDS Abu_0556 NC_009850.1 560208 561032 D hypothetical protein 560208..561032 Arcobacter butzleri RM4018 5624566 YP_001489493.1 CDS tpx NC_009850.1 561113 561652 D Pfam match to PF08534 Redoxin, score 141.3, E-value 2.4E-039; thiol peroxidase 561113..561652 Arcobacter butzleri RM4018 5624567 YP_001489494.1 CDS Abu_0558 NC_009850.1 561764 562492 D Pfam match to PF08238 Sel1, score 43, E-value 9.1E-010; hypothetical protein 561764..562492 Arcobacter butzleri RM4018 5624568 YP_001489495.1 CDS Abu_0559 NC_009850.1 562512 563489 R Pfam match to PF01758 SBF, score 23, E-value 2.5E-006; efflux protein bile acid:sodium symporter family protein complement(562512..563489) Arcobacter butzleri RM4018 5624569 YP_001489496.1 CDS Abu_0560 NC_009850.1 563572 564762 D hypothetical protein 563572..564762 Arcobacter butzleri RM4018 5624570 YP_001489497.1 CDS Abu_0561 NC_009850.1 565013 565939 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 565013..565939 Arcobacter butzleri RM4018 5624378 YP_001489498.1 CDS Abu_0562 NC_009850.1 565939 566505 D Pfam match to PF01794 Ferric_reduct, score 50.3, E-value 2E-013; hypothetical protein 565939..566505 Arcobacter butzleri RM4018 5624379 YP_001489499.1 CDS rep NC_009850.1 566755 568800 D Pfam match to PF00580 UvrD-helicase, score 311.6, E-value 1.3E-090; ATP-dependent DNA helicase UvrD 566755..568800 Arcobacter butzleri RM4018 5624380 YP_001489500.1 CDS Abu_0564 NC_009850.1 568847 570004 D Pfam match to PF00999 Na_H_Exchanger, score 148.1, E-value 2.1E-041; sodium/hydrogen antiporter 568847..570004 Arcobacter butzleri RM4018 5624381 YP_001489501.1 CDS soxC NC_009850.1 570246 571580 D Pfam matches to PF00174 Oxidored_molyb, score 200.4, E-value 3.7E-057, and to PF03404 Mo-co_dimer, score 56.6, E-value 7.7E-014; sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit 570246..571580 Arcobacter butzleri RM4018 5624382 YP_001489502.1 CDS soxD NC_009850.1 571549 572733 D sulfur oxidation protein SoxCD, diheme cytochrome c subunit 571549..572733 Arcobacter butzleri RM4018 5624383 YP_001489503.1 CDS soxX NC_009850.1 572748 573101 D Pfam match to PF00034 Cytochrom_C, score 33.7, E-value 5.9E-007; sulfur oxidation protein SoxXA, monoheme cytochrome c subunit 572748..573101 Arcobacter butzleri RM4018 5624384 YP_001489504.1 CDS soxY NC_009850.1 573117 573569 D sulfur oxidation protein SoxYZ, sulfur covalently binding protein 573117..573569 Arcobacter butzleri RM4018 5624385 YP_001489505.1 CDS soxZ NC_009850.1 573627 573932 D sulfur oxidation protein SoxYZ, sulfur compound chelating protein 573627..573932 Arcobacter butzleri RM4018 5624386 YP_001489506.1 CDS soxA NC_009850.1 573970 574884 D sulfur oxidation protein SoxXA, diheme cytochrome c subunit 573970..574884 Arcobacter butzleri RM4018 5624387 YP_001489507.1 CDS Abu_0571 NC_009850.1 574898 575317 D hypothetical protein 574898..575317 Arcobacter butzleri RM4018 5624388 YP_001489508.1 CDS soxB NC_009850.1 575449 577215 D Pfam match to PF02872 5_nucleotid_C, score 75.8, E-value 1.2E-019; sulfur oxidation protein, sulfate thiol esterase 575449..577215 Arcobacter butzleri RM4018 5624389 YP_001489509.1 CDS Abu_0573 NC_009850.1 577302 578096 D hypothetical protein 577302..578096 Arcobacter butzleri RM4018 5624053 YP_001489510.1 CDS Abu_0574 NC_009850.1 578093 578527 D hypothetical protein 578093..578527 Arcobacter butzleri RM4018 5624054 YP_001489511.1 CDS Abu_0575 NC_009850.1 578531 578971 D hypothetical protein 578531..578971 Arcobacter butzleri RM4018 5624055 YP_001489512.1 CDS Abu_0576 NC_009850.1 578989 579780 D Pfam match to PF00561 Abhydrolase_1, score 30.7, E-value 2.2E-008; hypothetical protein 578989..579780 Arcobacter butzleri RM4018 5624056 YP_001489513.1 CDS pfpI NC_009850.1 579811 580377 R Pfam match to PF01965 DJ-1_PfpI, score 94.3, E-value 9E-021; peptidase, ThiJ/PfpI family protein complement(579811..580377) Arcobacter butzleri RM4018 5624057 YP_001489514.1 CDS Abu_0578 NC_009850.1 580452 581369 R Pfam match to PF00753 Lactamase_B, score 97.5, E-value 3.6E-026; beta-lactamase-like protein complement(580452..581369) Arcobacter butzleri RM4018 5624058 YP_001489515.1 CDS Abu_0579 NC_009850.1 581459 582511 D hypothetical protein 581459..582511 Arcobacter butzleri RM4018 5624059 YP_001489516.1 CDS Abu_0580 NC_009850.1 582535 583209 R rhodanese-like protein complement(582535..583209) Arcobacter butzleri RM4018 5624060 YP_001489517.1 CDS valS NC_009850.1 583395 586010 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 583395..586010 Arcobacter butzleri RM4018 5624061 YP_001489518.1 CDS Abu_0582 NC_009850.1 586038 586856 D hypothetical protein 586038..586856 Arcobacter butzleri RM4018 5624062 YP_001489519.1 CDS Abu_0583 NC_009850.1 587017 587211 D hypothetical protein 587017..587211 Arcobacter butzleri RM4018 5624063 YP_001489520.1 CDS Abu_0584 NC_009850.1 587249 588103 R hypothetical protein complement(587249..588103) Arcobacter butzleri RM4018 5624064 YP_001489521.1 CDS Abu_0585 NC_009850.1 588110 589423 R Pfam match to PF07690 MFS_1, score 215.8, E-value 8.7E-062; major facilitator superfamily transporter complement(588110..589423) Arcobacter butzleri RM4018 5623749 YP_001489522.1 CDS Abu_0586 NC_009850.1 589501 590100 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 589501..590100 Arcobacter butzleri RM4018 5623750 YP_001489523.1 CDS Abu_0587 NC_009850.1 590090 590410 R hypothetical protein complement(590090..590410) Arcobacter butzleri RM4018 5623751 YP_001489524.1 CDS Abu_0588 NC_009850.1 590407 590748 R hypothetical protein complement(590407..590748) Arcobacter butzleri RM4018 5623752 YP_001489525.1 CDS Abu_0589 NC_009850.1 590738 591025 R hypothetical protein complement(590738..591025) Arcobacter butzleri RM4018 5623753 YP_001489526.1 CDS proC NC_009850.1 591012 591776 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(591012..591776) Arcobacter butzleri RM4018 5623754 YP_001489527.1 CDS Abu_0591 NC_009850.1 591846 592526 D hypothetical protein 591846..592526 Arcobacter butzleri RM4018 5623755 YP_001489528.1 CDS lon NC_009850.1 592569 594986 D Pfam matches to PF05362 Lon_C, score 325.6, E-value 8.2E-095, and to PF00004 AAA, score 159.6, E-value 4.9E-048, and to PF02190 LON, score 18.5, E-value 1.2E-007; ATP-dependent protease La 592569..594986 Arcobacter butzleri RM4018 5623756 YP_001489529.1 CDS Abu_0593 NC_009850.1 594990 595553 D Pfam match to PF01694 Rhomboid, score 102.1, E-value 1.5E-027; rhomboid-like protein 594990..595553 Arcobacter butzleri RM4018 5623757 YP_001489530.1 CDS Abu_0594 NC_009850.1 595550 596008 D Pfam match to PF01451 LMWPc, score 128, E-value 2.4E-035; protein tyrosine phosphatase 595550..596008 Arcobacter butzleri RM4018 5623758 YP_001489531.1 CDS Abu_0595 NC_009850.1 596048 597337 D hypothetical protein 596048..597337 Arcobacter butzleri RM4018 5623759 YP_001489532.1 CDS Abu_0596 NC_009850.1 597340 599022 D Pfam match to PF00515 TPR_1, score 27.8, E-value 3.6E-005; TPR repeat-containing protein 597340..599022 Arcobacter butzleri RM4018 5623760 YP_001489533.1 CDS Abu_0597 NC_009850.1 599075 599506 R Pfam match to PF01047 MarR, score 80.9, E-value 1.3E-022; MarR family transcriptional regulator complement(599075..599506) Arcobacter butzleri RM4018 5623549 YP_001489534.1 CDS Abu_0598 NC_009850.1 599645 599968 D hypothetical protein 599645..599968 Arcobacter butzleri RM4018 5623550 YP_001489535.1 CDS Abu_0599 NC_009850.1 600032 600280 R Pfam match to PF01381 HTH_3, score 26.9, E-value 1.4E-006; hypothetical protein complement(600032..600280) Arcobacter butzleri RM4018 5623551 YP_001489536.1 CDS Abu_0602 NC_009850.1 602083 603621 R Pfam matches to PF00015 MCPsignal, score 116, E-value 9.9E-032, and to PF08447 PAS_3, score 71, E-value 6E-019; methyl-accepting chemotaxis protein complement(602083..603621) Arcobacter butzleri RM4018 5623553 YP_001489537.1 CDS Abu_0603 NC_009850.1 603754 603978 D hypothetical protein 603754..603978 Arcobacter butzleri RM4018 5623554 YP_001489538.1 CDS Abu_0604 NC_009850.1 604006 604878 D Pfam match to PF00892 DUF6, score 47.8, E-value 7.7E-012; hypothetical protein 604006..604878 Arcobacter butzleri RM4018 5623555 YP_001489539.1 CDS accC2 NC_009850.1 605069 606520 R Pfam matches to PF02786 CPSase_L_D2, score 350.1, E-value 3.4E-102, and to PF02785 Biotin_carb_C, score 211.5, E-value 1.7E-060, and to PF00289 CPSase_L_chain, score 135.4, E-value 1.4E-037; acetyl CoA carboxylase, biotin carboxylase subunit complement(605069..606520) Arcobacter butzleri RM4018 5623556 YP_001489540.1 CDS Abu_0606 NC_009850.1 606769 607122 R Pfam match to PF01883 DUF59, score 79.8, E-value 7.9E-021; hypothetical protein complement(606769..607122) Arcobacter butzleri RM4018 5623557 YP_001489541.1 CDS sufE NC_009850.1 607132 607542 R Pfam match to PF02657 SufE, score 90.5, E-value 4.7E-024; SUF regulatory protein complement(607132..607542) Arcobacter butzleri RM4018 5623558 YP_001489542.1 CDS sufS NC_009850.1 607544 608728 R Pfam match to PF00266 Aminotran_5, score 476, E-value 4.3E-140; selenocysteine lyase/cysteine desulfurase complement(607544..608728) Arcobacter butzleri RM4018 5623559 YP_001489543.1 CDS sufD NC_009850.1 608721 609752 R Pfam match to PF01458 UPF0051, score 56.8, E-value 6.6E-014; Fe-S assembly protein complement(608721..609752) Arcobacter butzleri RM4018 5623560 YP_001489544.1 CDS sufC NC_009850.1 609739 610509 R Pfam match to PF00005 ABC_tran, score 105.8, E-value 1.2E-028; Fe-S assembly ABC transporter, ATP-binding protein complement(609739..610509) Arcobacter butzleri RM4018 5623092 YP_001489545.1 CDS sufB NC_009850.1 610513 611982 R Pfam match to PF01458 UPF0051, score 449.6, E-value 3.7E-132; Fe-S assembly ABC transporter, permease complement(610513..611982) Arcobacter butzleri RM4018 5623093 YP_001489546.1 CDS iscS NC_009850.1 612179 613375 D Pfam match to PF00266 Aminotran_5, score 321, E-value 1.9E-093; cysteine desulfurase/aminotransferase (IscS/NifS) 612179..613375 Arcobacter butzleri RM4018 5623094 YP_001489547.1 CDS iscU NC_009850.1 613406 614386 D Pfam matches to PF01592 NifU_N, score 203.6, E-value 4.1E-058, and to PF01106 NifU, score 92.6, E-value 1.1E-024, and to PF04324 Fer2_BFD, score 46.3, E-value 9.5E-011; NifU-like protein 613406..614386 Arcobacter butzleri RM4018 5623095 YP_001489548.1 CDS Abu_0614 NC_009850.1 614517 615140 D Pfam match to PF00571 CBS, score 94.2, E-value 3.6E-025; hypothetical protein 614517..615140 Arcobacter butzleri RM4018 5623096 YP_001489549.1 CDS Abu_0615 NC_009850.1 615142 616389 R Pfam match to PF00990 GGDEF, score 142, E-value 1.3E-040; GGDEF domain-containing protein complement(615142..616389) Arcobacter butzleri RM4018 5623097 YP_001489550.1 CDS argH NC_009850.1 616464 617864 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 616464..617864 Arcobacter butzleri RM4018 5623098 YP_001489551.1 CDS cheV NC_009850.1 617884 618792 R Pfam matches to PF00072 Response_reg, score 45.7, E-value 1.5E-013, and to PF01584 CheW, score 36.7, E-value 7.4E-008; chemotaxis signal transduction protein CheV complement(617884..618792) Arcobacter butzleri RM4018 5623099 YP_001489552.1 CDS Abu_0618 NC_009850.1 618843 619502 R Pfam match to PF00899 ThiF, score 101.6, E-value 2.2E-027; MoeB/ThiF family protein complement(618843..619502) Arcobacter butzleri RM4018 5623100 YP_001489553.1 CDS greA NC_009850.1 619565 620050 D Pfam matches to PF01272 GreA_GreB, score 117.5, E-value 3.5E-032, and to PF03449 GreA_GreB_N, score 99.7, E-value 7.8E-027; transcription elongation factor GreA 619565..620050 Arcobacter butzleri RM4018 5623101 YP_001489554.1 CDS Abu_0620 NC_009850.1 620063 620761 D Pfam match to PF00149 Metallophos, score 30.7, E-value 4.8E-006; hypothetical protein 620063..620761 Arcobacter butzleri RM4018 5623102 YP_001489555.1 CDS uvrB NC_009850.1 620773 622746 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 620773..622746 Arcobacter butzleri RM4018 5623103 YP_001489556.1 CDS Abu_0622 NC_009850.1 622837 624720 D Pfam match to PF00015 MCPsignal, score 153.2, E-value 6E-043; methyl-accepting chemotaxis protein 622837..624720 Arcobacter butzleri RM4018 5623626 YP_001489557.1 CDS nth NC_009850.1 624727 625371 R Pfam match to PF00730 HhH-GPD, score 74, E-value 4.2E-019; endonuclease III complement(624727..625371) Arcobacter butzleri RM4018 5623627 YP_001489558.1 CDS Abu_0624 NC_009850.1 625368 625778 R hypothetical protein complement(625368..625778) Arcobacter butzleri RM4018 5623628 YP_001489559.1 CDS Abu_0625 NC_009850.1 625939 627921 D Pfam matches to PF00593 TonB_dep_Rec, score 68.2, E-value 2.4E-017, and to PF07715 Plug, score 40.8, E-value 4.4E-009; TonB-dependent receptor protein 625939..627921 Arcobacter butzleri RM4018 5623629 YP_001489560.1 CDS Abu_0626 NC_009850.1 628024 630180 D Pfam matches to PF00593 TonB_dep_Rec, score 86.3, E-value 8.5E-023, and to PF07715 Plug, score 67.8, E-value 3.2E-017; TonB-dependent receptor protein 628024..630180 Arcobacter butzleri RM4018 5623630 YP_001489561.1 CDS Abu_0627 NC_009850.1 630232 631623 R Pfam match to PF00015 MCPsignal, score 116.1, E-value 9E-032; methyl-accepting chemotaxis protein complement(630232..631623) Arcobacter butzleri RM4018 5623631 YP_001489562.1 CDS Abu_0628 NC_009850.1 631716 632813 R hypothetical protein complement(631716..632813) Arcobacter butzleri RM4018 5623632 YP_001489563.1 CDS Abu_0629 NC_009850.1 633356 633541 D hypothetical protein 633356..633541 Arcobacter butzleri RM4018 5623633 YP_001489564.1 CDS Abu_0630 NC_009850.1 633654 634346 D Pfam matches to PF00072 Response_reg, score 92.3, E-value 7.7E-028, and to PF00486 Trans_reg_C, score 74.2, E-value 3.6E-019; two-component response regulator 633654..634346 Arcobacter butzleri RM4018 5623634 YP_001489565.1 CDS Abu_0631 NC_009850.1 634351 637332 D Pfam matches to PF02518 HATPase_c, score 50.2, E-value 6.5E-012, and to PF08447 PAS_3, score 23.2, E-value 9.5E-006, and to PF00989 PAS, score 20.4, E-value 1.1E-005; two-component sensor histidine kinase 634351..637332 Arcobacter butzleri RM4018 5623635 YP_001489566.1 CDS Abu_0632 NC_009850.1 637521 639824 D Pfam match to PF00015 MCPsignal, score 152.6, E-value 9.6E-043; methyl-accepting chemotaxis protein 637521..639824 Arcobacter butzleri RM4018 5623636 YP_001489567.1 CDS Abu_0633 NC_009850.1 639938 641944 D Pfam match to PF00015 MCPsignal, score 163.7, E-value 4.4E-046; methyl-accepting chemotaxis protein 639938..641944 Arcobacter butzleri RM4018 5623637 YP_001489568.1 CDS Abu_0634 NC_009850.1 641969 643198 R hypothetical protein complement(641969..643198) Arcobacter butzleri RM4018 5623110 YP_001489569.1 CDS rpiB NC_009850.1 643460 643915 R catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B complement(643460..643915) Arcobacter butzleri RM4018 5623111 YP_001489570.1 CDS lepP NC_009850.1 643915 644697 R Pfam match to PF00717 Peptidase_S24, score 74.6, E-value 2.9E-019; signal peptidase I complement(643915..644697) Arcobacter butzleri RM4018 5623112 YP_001489571.1 CDS folD NC_009850.1 644691 645554 R Pfam matches to PF02882 THF_DHG_CYH_C, score 345, E-value 1.1E-100, and to PF00763 THF_DHG_CYH, score 201.6, E-value 1.7E-057; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase complement(644691..645554) Arcobacter butzleri RM4018 5623113 YP_001489572.1 CDS rplY NC_009850.1 645702 646238 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 645702..646238 Arcobacter butzleri RM4018 5623114 YP_001489573.1 CDS pth NC_009850.1 646247 646798 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 646247..646798 Arcobacter butzleri RM4018 5623115 YP_001489574.1 CDS Abu_0640 NC_009850.1 646801 647868 D Pfam match to PF03739 YjgP_YjgQ, score 111.7, E-value 1.9E-030; hypothetical protein 646801..647868 Arcobacter butzleri RM4018 5623116 YP_001489575.1 CDS Abu_0641 NC_009850.1 647882 648328 D Pfam match to PF00293 NUDIX, score 30.6, E-value 4.9E-006; hypothetical protein 647882..648328 Arcobacter butzleri RM4018 5623117 YP_001489576.1 CDS amiA NC_009850.1 648291 649751 R Pfam match to PF01520 Amidase_3, score 258.9, E-value 9.3E-075; N-acetylmuramoyl-L-alanine amidase complement(648291..649751) Arcobacter butzleri RM4018 5623118 YP_001489577.1 CDS npd NC_009850.1 649757 650788 R Pfam match to PF03060 NPD, score 358.2, E-value 1.7E-105; 2-nitropropane dioxygenase complement(649757..650788) Arcobacter butzleri RM4018 5623119 YP_001489578.1 CDS tyrS NC_009850.1 650849 652057 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(650849..652057) Arcobacter butzleri RM4018 5623120 YP_001489579.1 CDS spoT NC_009850.1 652076 654220 R Pfam matches to PF04607 RelA_SpoT, score 163.9, E-value 3.7E-046, and to PF02824 TGS, score 51.4, E-value 2.8E-012, and to PF01966 HD, score 36.2, E-value 1E-007; bifunctional ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase complement(652076..654220) Arcobacter butzleri RM4018 5623121 YP_001489580.1 CDS rpoZ NC_009850.1 654254 654472 R Pfam match to PF01192 RNA_pol_Rpb6, score 37.2, E-value 5.1E-008; DNA-directed RNA polymerase, omega chain complement(654254..654472) Arcobacter butzleri RM4018 5623197 YP_001489581.1 CDS pyrH NC_009850.1 654495 655202 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(654495..655202) Arcobacter butzleri RM4018 5623198 YP_001489582.1 CDS Abu_0648 NC_009850.1 655259 656326 R hypothetical protein complement(655259..656326) Arcobacter butzleri RM4018 5623199 YP_001489583.1 CDS pdxA NC_009850.1 656323 657258 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(656323..657258) Arcobacter butzleri RM4018 5623200 YP_001489584.1 CDS pdxJ NC_009850.1 657251 658036 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(657251..658036) Arcobacter butzleri RM4018 5623201 YP_001489585.1 CDS trpE NC_009850.1 658046 659461 R Pfam matches to PF00425 Chorismate_bind, score 421.5, E-value 1.1E-123, and to PF04715 Anth_synt_I_N, score 50.4, E-value 1.2E-014; anthranilate synthase, component I complement(658046..659461) Arcobacter butzleri RM4018 5623202 YP_001489586.1 CDS Abu_0652 NC_009850.1 659472 660500 R Pfam match to PF05036 SPOR, score 32.8, E-value 3.7E-009; hypothetical protein complement(659472..660500) Arcobacter butzleri RM4018 5623203 YP_001489587.1 CDS glyA NC_009850.1 660526 661788 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(660526..661788) Arcobacter butzleri RM4018 5623204 YP_001489588.1 CDS lysS NC_009850.1 661802 663316 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(661802..663316) Arcobacter butzleri RM4018 5623205 YP_001489589.1 CDS Abu_0655 NC_009850.1 663329 664033 R Pfam match to PF02674 Colicin_V, score 95.9, E-value 1.1E-025; colicin V production protein complement(663329..664033) Arcobacter butzleri RM4018 5623206 YP_001489590.1 CDS ispG NC_009850.1 664132 665193 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 664132..665193 Arcobacter butzleri RM4018 5623207 YP_001489591.1 CDS Abu_0657 NC_009850.1 665193 666494 D Pfam match to PF00990 GGDEF, score 135.9, E-value 7.2E-039; GGDEF domain-containing protein 665193..666494 Arcobacter butzleri RM4018 5623208 YP_001489592.1 CDS dnaB NC_009850.1 666557 667999 D unwinds double stranded DNA; replicative DNA helicase 666557..667999 Arcobacter butzleri RM4018 5625125 YP_001489593.1 CDS ugd NC_009850.1 668065 669231 D Pfam matches to PF03721 UDPG_MGDP_dh_N, score 182.6, E-value 8.9E-052, and to PF00984 UDPG_MGDP_dh, score 132.5, E-value 1.1E-036, and to PF03720 UDPG_MGDP_dh_C, score 27, E-value 2.1E-006; UDP-glucose 6-dehydrogenase 668065..669231 Arcobacter butzleri RM4018 5625126 YP_001489594.1 CDS Abu_0660 NC_009850.1 669242 670333 D Pfam match to PF01370 Epimerase, score 214.5, E-value 2.2E-061; NAD-dependent epimerase/dehydratase 669242..670333 Arcobacter butzleri RM4018 5625127 YP_001489595.1 CDS Abu_0661 NC_009850.1 670330 671574 D Pfam matches to PF03721 UDPG_MGDP_dh_N, score 239.8, E-value 5.3E-069, and to PF00984 UDPG_MGDP_dh, score 149.4, E-value 8.5E-042, and to PF03720 UDPG_MGDP_dh_C, score 98.5, E-value 1.9E-026; UDP-hexose dehydrogenase 670330..671574 Arcobacter butzleri RM4018 5625128 YP_001489596.1 CDS Abu_0662 NC_009850.1 671577 672545 D Pfam match to PF01408 GFO_IDH_MocA, score 51.9, E-value 5.4E-014; hypothetical protein 671577..672545 Arcobacter butzleri RM4018 5625129 YP_001489597.1 CDS Abu_0663 NC_009850.1 672550 673128 D hypothetical protein 672550..673128 Arcobacter butzleri RM4018 5625130 YP_001489598.1 CDS Abu_0664 NC_009850.1 673131 674219 D Pfam match to PF01041 DegT_DnrJ_EryC1, score 493.3, E-value 2.7E-145; DegT/DnrJ/EryC1/StrS aminotransferase 673131..674219 Arcobacter butzleri RM4018 5625131 YP_001489599.1 CDS Abu_0665 NC_009850.1 674219 675397 D Pfam match to PF01266 DAO, score 146.4, E-value 3.9E-041; FAD-dependent oxidoreductase 674219..675397 Arcobacter butzleri RM4018 5625132 YP_001489600.1 CDS Abu_0666 NC_009850.1 675363 676370 D Pfam match to PF01370 Epimerase, score 220.8, E-value 2.7E-063; NAD-dependent epimerase/dehydratase 675363..676370 Arcobacter butzleri RM4018 5625133 YP_001489601.1 CDS Abu_0667 NC_009850.1 676375 677565 D Pfam match to PF01041 DegT_DnrJ_EryC1, score 330.4, E-value 2.9E-096; DegT/DnrJ/EryC1/StrS aminotransferase 676375..677565 Arcobacter butzleri RM4018 5625134 YP_001489602.1 CDS asnB2 NC_009850.1 677567 679564 D Pfam matches to PF00733 Asn_synthase, score 260.9, E-value 2.4E-075, and to PF00310 GATase_2, score 55.8, E-value 7.4E-018; asparagine synthetase 677567..679564 Arcobacter butzleri RM4018 5625135 YP_001489603.1 CDS Abu_0669 NC_009850.1 679515 680075 D hypothetical protein 679515..680075 Arcobacter butzleri RM4018 5625136 YP_001489604.1 CDS wbpG1 NC_009850.1 680075 681247 D LPS biosynthesis protein WbpG 680075..681247 Arcobacter butzleri RM4018 5625113 YP_001489605.1 CDS hisH NC_009850.1 681244 681861 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 681244..681861 Arcobacter butzleri RM4018 5625114 YP_001489606.1 CDS hisF2 NC_009850.1 681864 682625 D Pfam match to PF00977 His_biosynth, score 262.6, E-value 7.2E-076; imidazoleglycerol phosphate synthase, cyclase subunit 681864..682625 Arcobacter butzleri RM4018 5625115 YP_001489607.1 CDS Abu_0673 NC_009850.1 682622 684136 D hypothetical protein 682622..684136 Arcobacter butzleri RM4018 5625116 YP_001489608.1 CDS Abu_0674 NC_009850.1 684136 685311 D Pfam match to PF00534 Glycos_transf_1, score 27.1, E-value 4.4E-007; hypothetical protein 684136..685311 Arcobacter butzleri RM4018 5625117 YP_001489609.1 CDS Abu_0675 NC_009850.1 685396 687096 D Pfam matches to PF00005 ABC_tran, score 208.3, E-value 1.6E-059, and to PF00664 ABC_membrane, score 23.1, E-value 7E-006; ABC transporter, ATP-binding/permease 685396..687096 Arcobacter butzleri RM4018 5625118 YP_001489610.1 CDS Abu_0676 NC_009850.1 687100 689106 D Pfam match to PF01757 Acyl_transf_3, score 230.1, E-value 4.5E-066; O-antigen acyltransferase 687100..689106 Arcobacter butzleri RM4018 5625119 YP_001489611.1 CDS pglJ NC_009850.1 689103 690233 D Pfam match to PF00534 Glycos_transf_1, score 153.7, E-value 4.3E-043; glycosyltransferase 689103..690233 Arcobacter butzleri RM4018 5625120 YP_001489612.1 CDS asnB NC_009850.1 690221 692119 D Pfam matches to PF00733 Asn_synthase, score 295.3, E-value 1.1E-085, and to PF00310 GATase_2, score 17.8, E-value 2.2E-012; asparagine synthetase 690221..692119 Arcobacter butzleri RM4018 5625121 YP_001489613.1 CDS Abu_0679 NC_009850.1 692112 693218 D Pfam match to PF00534 Glycos_transf_1, score 122.3, E-value 1.2E-033; glycosyltransferase 692112..693218 Arcobacter butzleri RM4018 5625122 YP_001489614.1 CDS Abu_0680 NC_009850.1 693277 694047 D Pfam match to PF00953 Glycos_transf_4, score 121.2, E-value 2.7E-033; hypothetical protein 693277..694047 Arcobacter butzleri RM4018 5625123 YP_001489615.1 CDS Abu_0681 NC_009850.1 694138 694272 D hypothetical protein 694138..694272 Arcobacter butzleri RM4018 5625124 YP_001489616.1 CDS Abu_0682 NC_009850.1 694296 695534 D Pfam match to PF01943 Polysacc_synt, score 27.1, E-value 9.9E-006; O-antigen translocase 694296..695534 Arcobacter butzleri RM4018 5624091 YP_001489617.1 CDS wbpG2 NC_009850.1 695534 696661 D LPS biosynthesis protein WbpG 695534..696661 Arcobacter butzleri RM4018 5624092 YP_001489618.1 CDS Abu_0684 NC_009850.1 696658 697191 D hypothetical protein 696658..697191 Arcobacter butzleri RM4018 5624093 YP_001489619.1 CDS Abu_0685 NC_009850.1 697188 698333 D hypothetical protein 697188..698333 Arcobacter butzleri RM4018 5624094 YP_001489620.1 CDS Abu_0686 NC_009850.1 698326 699528 D hypothetical protein 698326..699528 Arcobacter butzleri RM4018 5624095 YP_001489621.1 CDS Abu_0687 NC_009850.1 699534 700697 D Pfam match to PF00534 Glycos_transf_1, score 151.5, E-value 2E-042; glycosyltransferase 699534..700697 Arcobacter butzleri RM4018 5624096 YP_001489622.1 CDS wbpG3 NC_009850.1 700687 701832 D Pfam match to PF01171 ATP_bind_3, score 18, E-value 3.8E-005; LPS biosynthesis protein WbpG 700687..701832 Arcobacter butzleri RM4018 5624097 YP_001489623.1 CDS hisH NC_009850.1 701841 702446 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 701841..702446 Arcobacter butzleri RM4018 5624098 YP_001489624.1 CDS hisF3 NC_009850.1 702443 703213 D Pfam match to PF00977 His_biosynth, score 306.8, E-value 3.6E-089; imidazoleglycerol phosphate synthase, cyclase subunit 702443..703213 Arcobacter butzleri RM4018 5624099 YP_001489625.1 CDS Abu_0691 NC_009850.1 703213 704322 D Pfam match to PF00534 Glycos_transf_1, score 41.1, E-value 5.7E-011; glycosyltransferase 703213..704322 Arcobacter butzleri RM4018 5624100 YP_001489626.1 CDS Abu_0692 NC_009850.1 704319 705389 D Pfam match to PF02350 Epimerase_2, score 481.9, E-value 6.9E-142; hexose epimerase 704319..705389 Arcobacter butzleri RM4018 5623542 YP_001489627.1 CDS Abu_0693 NC_009850.1 705382 706380 D Pfam match to PF00535 Glycos_transf_2, score 106, E-value 2.5E-031; glycosyltransferase 705382..706380 Arcobacter butzleri RM4018 5623543 YP_001489628.1 CDS Abu_0694 NC_009850.1 706377 707339 D Pfam match to PF00953 Glycos_transf_4, score 66.6, E-value 7.5E-017; glycosyltransferase 706377..707339 Arcobacter butzleri RM4018 5623544 YP_001489629.1 CDS Abu_0695 NC_009850.1 707339 707911 D Pfam match to PF00908 dTDP_sugar_isom, score 191.8, E-value 1.5E-054; hexose epimerase 707339..707911 Arcobacter butzleri RM4018 5623545 YP_001489630.1 CDS pglF NC_009850.1 707921 709663 D Pfam match to PF02719 Polysacc_synt_2, score 584.2, E-value 1.1E-172; sugar epimerase/dehydratase 707921..709663 Arcobacter butzleri RM4018 5623546 YP_001489631.1 CDS Abu_0697 NC_009850.1 709725 710123 D hypothetical protein 709725..710123 Arcobacter butzleri RM4018 5623547 YP_001489632.1 CDS ligA NC_009850.1 710127 710981 R catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase complement(710127..710981) Arcobacter butzleri RM4018 5623548 YP_001489633.1 CDS apt NC_009850.1 711046 711603 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 711046..711603 Arcobacter butzleri RM4018 5624101 YP_001489634.1 CDS trpB1 NC_009850.1 711620 712828 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 711620..712828 Arcobacter butzleri RM4018 5623998 YP_001489635.1 CDS Abu_0701 NC_009850.1 712846 713547 D hypothetical protein 712846..713547 Arcobacter butzleri RM4018 5625194 YP_001489636.1 CDS pepA NC_009850.1 713537 714949 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 713537..714949 Arcobacter butzleri RM4018 5625195 YP_001489637.1 CDS Abu_0703 NC_009850.1 714977 715660 R Pfam match to PF03544 TonB, score 42.7, E-value 1.1E-009; TonB-dependent receptor protein complement(714977..715660) Arcobacter butzleri RM4018 5625196 YP_001489638.1 CDS exbD2 NC_009850.1 715668 716045 R Pfam match to PF02472 ExbD, score 135.5, E-value 1.3E-037; biopolymer transport protein ExbD complement(715668..716045) Arcobacter butzleri RM4018 5625197 YP_001489639.1 CDS exbB2 NC_009850.1 716026 716454 R Pfam match to PF01618 MotA_ExbB, score 142.4, E-value 1.1E-039; biopolymer transport protein ExbB complement(716026..716454) Arcobacter butzleri RM4018 5625198 YP_001489640.1 CDS Abu_0706 NC_009850.1 716612 717826 D Pfam match to PF02321 OEP, score 33.9, E-value 5.2E-007; hypothetical protein 716612..717826 Arcobacter butzleri RM4018 5625199 YP_001489641.1 CDS Abu_0707 NC_009850.1 717833 719095 D Pfam match to PF00529 HlyD, score 38.7, E-value 5E-010; HlyD family secretion protein 717833..719095 Arcobacter butzleri RM4018 5625200 YP_001489642.1 CDS Abu_0708 NC_009850.1 719082 719789 D Pfam match to PF00005 ABC_tran, score 204.7, E-value 2E-058; ABC transporter, ATP-binding protein 719082..719789 Arcobacter butzleri RM4018 5625201 YP_001489643.1 CDS Abu_0709 NC_009850.1 719789 721000 D Pfam match to PF02687 FtsX, score 169.8, E-value 6.2E-048; ABC transporter, permease 719789..721000 Arcobacter butzleri RM4018 5625202 YP_001489644.1 CDS Abu_0710 NC_009850.1 721026 721505 R Pfam match to PF00023 Ank, score 26.1, E-value 2.7E-006; hypothetical protein complement(721026..721505) Arcobacter butzleri RM4018 5625203 YP_001489645.1 CDS Abu_0711 NC_009850.1 721990 724101 R Pfam matches to PF00122 E1-E2_ATPase, score 100.8, E-value 2.2E-030, and to PF00702 Hydrolase, score 105.1, E-value 1.2E-029; heavy metal translocating P-type ATPase complement(721990..724101) Arcobacter butzleri RM4018 5625204 YP_001489646.1 CDS Abu_0712 NC_009850.1 724103 724465 R hypothetical protein complement(724103..724465) Arcobacter butzleri RM4018 5625205 YP_001489647.1 CDS Abu_0713 NC_009850.1 724466 724816 R hypothetical protein complement(724466..724816) Arcobacter butzleri RM4018 5624152 YP_001489648.1 CDS Abu_0714 NC_009850.1 724816 725070 R hypothetical protein complement(724816..725070) Arcobacter butzleri RM4018 5624153 YP_001489649.1 CDS Abu_0715 NC_009850.1 725074 725760 R hypothetical protein complement(725074..725760) Arcobacter butzleri RM4018 5624154 YP_001489650.1 CDS Abu_0716 NC_009850.1 725757 726071 R hypothetical protein complement(725757..726071) Arcobacter butzleri RM4018 5624155 YP_001489651.1 CDS fur1 NC_009850.1 726132 726599 R Pfam match to PF01475 FUR, score 118.7, E-value 1.5E-032; ferric uptake regulation protein complement(726132..726599) Arcobacter butzleri RM4018 5624156 YP_001489652.1 CDS Abu_0718 NC_009850.1 726750 727142 D hypothetical protein 726750..727142 Arcobacter butzleri RM4018 5624157 YP_001489653.1 CDS fumC NC_009850.1 727165 728562 D Pfam match to PF00206 Lyase_1, score 518.7, E-value 6.1E-153; fumarate hydratase, class II 727165..728562 Arcobacter butzleri RM4018 5624158 YP_001489654.1 CDS Abu_0720 NC_009850.1 728584 728829 D hypothetical protein 728584..728829 Arcobacter butzleri RM4018 5624159 YP_001489655.1 CDS Abu_0721 NC_009850.1 728867 730720 R Pfam matches to PF07568 HisKA_2, score 95, E-value 2.1E-025, and to PF00672 HAMP, score 38.9, E-value 1.6E-008, and to PF02518 HATPase_c, score 31.1, E-value 3.6E-006; two-component sensor histidine kinase complement(728867..730720) Arcobacter butzleri RM4018 5624160 YP_001489656.1 CDS Abu_0722 NC_009850.1 730704 731558 R Pfam matches to PF00072 Response_reg, score 54, E-value 4.4E-016, and to PF00486 Trans_reg_C, score 35.1, E-value 2.2E-007; two-component response regulator complement(730704..731558) Arcobacter butzleri RM4018 5624161 YP_001489657.1 CDS bfrE NC_009850.1 731681 733828 D Pfam matches to PF00593 TonB_dep_Rec, score 87.2, E-value 4.7E-023, and to PF07715 Plug, score 54.4, E-value 3.5E-013; TonB-dependent receptor 731681..733828 Arcobacter butzleri RM4018 5624162 YP_001489658.1 CDS Abu_0724 NC_009850.1 733912 734592 D Pfam match to PF03171 2OG-FeII_Oxy, score 41.9, E-value 2E-009; hypothetical protein 733912..734592 Arcobacter butzleri RM4018 5624163 YP_001489659.1 CDS Abu_0725 NC_009850.1 734589 735665 D Pfam match to PF01070 FMN_dh, score 408.1, E-value 1.1E-119; FMN-dependent alpha-hydroxy acid dehydrogenase 734589..735665 Arcobacter butzleri RM4018 5623789 YP_001489660.1 CDS irgA NC_009850.1 735880 737970 D Pfam matches to PF07715 Plug, score 117.4, E-value 3.8E-032, and to PF00593 TonB_dep_Rec, score 95.4, E-value 1.6E-025; iron-regulated outer membrane virulence protein 735880..737970 Arcobacter butzleri RM4018 5623790 YP_001489661.1 CDS Abu_0727 NC_009850.1 738049 738918 D Pfam match to PF00756 Esterase, score -3.2, E-value 1.3E-005; IroE protein 738049..738918 Arcobacter butzleri RM4018 5623791 YP_001489662.1 CDS Abu_0728 NC_009850.1 738931 740211 D Pfam match to PF08242 Methyltransf_12, score 39.1, E-value 1.4E-008; SAM-dependent methyltransferase 738931..740211 Arcobacter butzleri RM4018 5623792 YP_001489663.1 CDS Abu_0729 NC_009850.1 740310 740975 D hypothetical protein 740310..740975 Arcobacter butzleri RM4018 5623793 YP_001489664.1 CDS cysJ NC_009850.1 740987 742231 D Pfam match to PF03929 DUF337, score 135, E-value 1E-032; sulfite reductase, flavoprotein component 740987..742231 Arcobacter butzleri RM4018 5623794 YP_001489665.1 CDS Abu_0731 NC_009850.1 742316 742513 R Pfam match to PF04328 DUF466, score 110.9, E-value 3.3E-030; hypothetical protein complement(742316..742513) Arcobacter butzleri RM4018 5623795 YP_001489666.1 CDS cstA NC_009850.1 742516 744615 R Pfam match to PF02554 CstA, score 845.6, E-value 2.4E-251; carbon starvation protein A complement(742516..744615) Arcobacter butzleri RM4018 5623796 YP_001489667.1 CDS Abu_0733 NC_009850.1 744810 745913 D Pfam matches to PF06071 DUF933, score 211.3, E-value 2E-060, and to PF01926 MMR_HSR1, score 121.9, E-value 1.6E-033; GTP-binding protein 744810..745913 Arcobacter butzleri RM4018 5623797 YP_001489668.1 CDS Abu_0734 NC_009850.1 745923 746747 D hypothetical protein 745923..746747 Arcobacter butzleri RM4018 5623798 YP_001489669.1 CDS Abu_0735 NC_009850.1 746742 747359 R recombination protein RecO complement(746742..747359) Arcobacter butzleri RM4018 5623799 YP_001489670.1 CDS Abu_0736 NC_009850.1 747359 747613 R hypothetical protein complement(747359..747613) Arcobacter butzleri RM4018 5623800 YP_001489671.1 CDS Abu_0737 NC_009850.1 747730 748044 D Pfam match to PF06865 DUF1255, score 122.4, E-value 1.2E-033; hypothetical protein 747730..748044 Arcobacter butzleri RM4018 5623949 YP_001489672.1 CDS Abu_0738 NC_009850.1 748084 748785 R Pfam match to PF05573 NosL, score 35.5, E-value 3.5E-010; hypothetical protein complement(748084..748785) Arcobacter butzleri RM4018 5623950 YP_001489673.1 CDS Abu_0739 NC_009850.1 748829 750220 R Pfam matches to PF00990 GGDEF, score 201.8, E-value 1.5E-057, and to PF08447 PAS_3, score 64.1, E-value 4.7E-017; GGDEF/PAS domain-containing protein complement(748829..750220) Arcobacter butzleri RM4018 5623951 YP_001489674.1 CDS thiL NC_009850.1 750338 751159 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 750338..751159 Arcobacter butzleri RM4018 5623952 YP_001489675.1 CDS truD NC_009850.1 751293 752357 D catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 751293..752357 Arcobacter butzleri RM4018 5623953 YP_001489676.1 CDS Abu_0742 NC_009850.1 752410 752763 D hypothetical protein 752410..752763 Arcobacter butzleri RM4018 5623954 YP_001489677.1 CDS Abu_0743 NC_009850.1 752789 754981 R Pfam matches to PF00015 MCPsignal, score 122.4, E-value 1.1E-033, and to PF00672 HAMP, score 44.4, E-value 3.6E-010; methyl-accepting chemotaxis protein complement(752789..754981) Arcobacter butzleri RM4018 5623955 YP_001489678.1 CDS ruvA NC_009850.1 755090 755647 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 755090..755647 Arcobacter butzleri RM4018 5623956 YP_001489679.1 CDS ddl NC_009850.1 755666 756709 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 755666..756709 Arcobacter butzleri RM4018 5623957 YP_001489680.1 CDS Abu_0746 NC_009850.1 756712 757431 D Pfam match to PF00561 Abhydrolase_1, score 27.7, E-value 1.5E-007; 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 756712..757431 Arcobacter butzleri RM4018 5623958 YP_001489681.1 CDS murF NC_009850.1 757418 758854 D Pfam match to PF08245 Mur_ligase_M, score 35.6, E-value 6.3E-010; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase 757418..758854 Arcobacter butzleri RM4018 5623959 YP_001489682.1 CDS Abu_0748 NC_009850.1 758865 759353 D Pfam match to PF01230 HIT, score 21.6, E-value 3.4E-006; HIT family protein 758865..759353 Arcobacter butzleri RM4018 5623960 YP_001489683.1 CDS Abu_0749 NC_009850.1 759461 760453 D hypothetical protein 759461..760453 Arcobacter butzleri RM4018 5623269 YP_001489684.1 CDS Abu_0750 NC_009850.1 760564 761784 D hypothetical protein 760564..761784 Arcobacter butzleri RM4018 5623270 YP_001489685.1 CDS rpsJ NC_009850.1 761991 762305 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 761991..762305 Arcobacter butzleri RM4018 5623271 YP_001489686.1 CDS rplC NC_009850.1 762324 762899 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 762324..762899 Arcobacter butzleri RM4018 5623272 YP_001489687.1 CDS rplD NC_009850.1 762896 763507 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 762896..763507 Arcobacter butzleri RM4018 5623273 YP_001489688.1 CDS rplW NC_009850.1 763509 763790 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 763509..763790 Arcobacter butzleri RM4018 5623274 YP_001489689.1 CDS rplB NC_009850.1 763801 764628 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 763801..764628 Arcobacter butzleri RM4018 5623275 YP_001489690.1 CDS rpsS NC_009850.1 764638 764913 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 764638..764913 Arcobacter butzleri RM4018 5623276 YP_001489691.1 CDS rplV NC_009850.1 764916 765248 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 764916..765248 Arcobacter butzleri RM4018 5623277 YP_001489692.1 CDS rpsC NC_009850.1 765248 765952 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 765248..765952 Arcobacter butzleri RM4018 5623278 YP_001489693.1 CDS rplP NC_009850.1 765955 766380 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 765955..766380 Arcobacter butzleri RM4018 5623279 YP_001489694.1 CDS rpmC NC_009850.1 766367 766558 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 766367..766558 Arcobacter butzleri RM4018 5623280 YP_001489695.1 CDS rpsQ NC_009850.1 766569 766820 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 766569..766820 Arcobacter butzleri RM4018 5625358 YP_001489696.1 CDS rplN NC_009850.1 766820 767188 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 766820..767188 Arcobacter butzleri RM4018 5625359 YP_001489697.1 CDS rplX NC_009850.1 767188 767427 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 767188..767427 Arcobacter butzleri RM4018 5625360 YP_001489698.1 CDS rplE NC_009850.1 767420 767977 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 767420..767977 Arcobacter butzleri RM4018 5625361 YP_001489699.1 CDS rpsN NC_009850.1 767977 768162 D Pfam match to PF00253 Ribosomal_S14, score 80.5, E-value 4.7E-021; 30S ribosomal protein S14 767977..768162 Arcobacter butzleri RM4018 5625362 YP_001489700.1 CDS rpsH NC_009850.1 768175 768573 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 768175..768573 Arcobacter butzleri RM4018 5625363 YP_001489701.1 CDS rplF NC_009850.1 768583 769119 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 768583..769119 Arcobacter butzleri RM4018 5625364 YP_001489702.1 CDS rplR NC_009850.1 769129 769488 D Pfam match to PF00861 Ribosomal_L18p, score 132.5, E-value 1.1E-036; 50S ribosomal protein L18 769129..769488 Arcobacter butzleri RM4018 5625365 YP_001489703.1 CDS rpsE NC_009850.1 769498 769938 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 769498..769938 Arcobacter butzleri RM4018 5625366 YP_001489704.1 CDS rplO NC_009850.1 769942 770340 D late assembly protein; 50S ribosomal protein L15 769942..770340 Arcobacter butzleri RM4018 5625367 YP_001489705.1 CDS secY NC_009850.1 770343 771605 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 770343..771605 Arcobacter butzleri RM4018 5625368 YP_001489706.1 CDS map NC_009850.1 771607 772371 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 771607..772371 Arcobacter butzleri RM4018 5625369 YP_001489707.1 CDS infA NC_009850.1 772381 772599 D Pfam match to PF01176 eIF-1a, score 116.4, E-value 7.7E-032; translation initiation factor IF-1 772381..772599 Arcobacter butzleri RM4018 5624896 YP_001489708.1 CDS Abu_0774 NC_009850.1 772688 773356 D Pfam match to PF03167 UDG, score 39.4, E-value 1.1E-008; hypothetical protein 772688..773356 Arcobacter butzleri RM4018 5624897 YP_001489709.1 CDS Abu_0775 NC_009850.1 773353 774546 D hypothetical protein 773353..774546 Arcobacter butzleri RM4018 5624898 YP_001489710.1 CDS aspS NC_009850.1 774590 776359 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 774590..776359 Arcobacter butzleri RM4018 5624899 YP_001489711.1 CDS Abu_0777 NC_009850.1 776500 779085 D Pfam match to PF01584 CheW, score 34.8, E-value 2.8E-007; CheW-like chemotaxis protein 776500..779085 Arcobacter butzleri RM4018 5624900 YP_001489712.1 CDS Abu_0778 NC_009850.1 779146 780903 D Pfam match to PF08497 Radical_SAM_N, score 562.1, E-value 5.2E-166; radical SAM domain-containing protein 779146..780903 Arcobacter butzleri RM4018 5624901 YP_001489713.1 CDS adk1 NC_009850.1 780939 781580 R Pfam matches to PF00406 ADK, score 297.6, E-value 2.1E-086, and to PF05191 ADK_lid, score 76, E-value 1.1E-019; adenylate kinase complement(780939..781580) Arcobacter butzleri RM4018 5624902 YP_001489714.1 CDS adk NC_009850.1 781710 782279 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 781710..782279 Arcobacter butzleri RM4018 5624903 YP_001489715.1 CDS Abu_0781 NC_009850.1 782279 783046 D Pfam match to PF00994 MoCF_biosynth, score 52.3, E-value 6E-015; molybdopterin binding domain-containing protein 782279..783046 Arcobacter butzleri RM4018 5624904 YP_001489716.1 CDS cat NC_009850.1 783072 783716 D Pfam match to PF00302 CAT, score 378.6, E-value 8.5E-111; chloramphenicol O-acetyltransferase 783072..783716 Arcobacter butzleri RM4018 5624905 YP_001489717.1 CDS Abu_0783 NC_009850.1 783841 784983 D Pfam matches to PF08240 ADH_N, score 113.4, E-value 5.8E-031, and to PF00107 ADH_zinc_N, score 69.6, E-value 9.1E-018; zinc-containing NADP-dependent alcohol dehydrogenase 783841..784983 Arcobacter butzleri RM4018 5624906 YP_001489718.1 CDS Abu_0784 NC_009850.1 785021 786148 D Pfam match to PF00465 Fe-ADH, score 45.4, E-value 7.6E-016; iron-containing NADP-dependent alcohol dehydrogenase 785021..786148 Arcobacter butzleri RM4018 5624907 YP_001489719.1 CDS Abu_0785 NC_009850.1 786197 788458 R Pfam match to PF00015 MCPsignal, score 167.9, E-value 2.4E-047; methyl-accepting chemotaxis protein complement(786197..788458) Arcobacter butzleri RM4018 5624140 YP_001489720.1 CDS alr NC_009850.1 788583 789605 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(788583..789605) Arcobacter butzleri RM4018 5624141 YP_001489721.1 CDS uvrC NC_009850.1 789608 791458 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(789608..791458) Arcobacter butzleri RM4018 5624142 YP_001489722.1 CDS Abu_0788 NC_009850.1 791614 794010 D Pfam matches to PF00015 MCPsignal, score 163.8, E-value 4.1E-046, and to PF02743 Cache_1, score 58, E-value 2.8E-014; methyl-accepting chemotaxis protein 791614..794010 Arcobacter butzleri RM4018 5624143 YP_001489723.1 CDS Abu_0789 NC_009850.1 794444 796447 D Pfam match to PF00015 MCPsignal, score 172.2, E-value 1.2E-048; methyl-accepting chemotaxis protein 794444..796447 Arcobacter butzleri RM4018 5624144 YP_001489724.1 CDS Abu_0790 NC_009850.1 796489 798483 D Pfam match to PF00015 MCPsignal, score 163.8, E-value 4.1E-046; methyl-accepting chemotaxis protein 796489..798483 Arcobacter butzleri RM4018 5624145 YP_001489725.1 CDS Abu_0791 NC_009850.1 798834 800858 D Pfam match to PF00015 MCPsignal, score 156.2, E-value 7.9E-044; methyl-accepting chemotaxis protein 798834..800858 Arcobacter butzleri RM4018 5624146 YP_001489726.1 CDS Abu_0792 NC_009850.1 800866 801528 R Pfam matches to PF00072 Response_reg, score 89.4, E-value 6.1E-027, and to PF00486 Trans_reg_C, score 48.1, E-value 2.7E-011; two-component response regulator complement(800866..801528) Arcobacter butzleri RM4018 5624147 YP_001489727.1 CDS Abu_0793 NC_009850.1 801525 802589 R Pfam matches to PF00072 Response_reg, score 103.8, E-value 2.4E-031, and to PF02518 HATPase_c, score 69.7, E-value 8.7E-018, and to PF00512 HisKA, score 36.2, E-value 1E-007; two component system histidine kinase/response regulator fusion protein complement(801525..802589) Arcobacter butzleri RM4018 5624148 YP_001489728.1 CDS Abu_0794 NC_009850.1 802655 804952 D Pfam matches to PF02518 HATPase_c, score 132.7, E-value 9.5E-037, and to PF00072 Response_reg, score 120.7, E-value 1.6E-036, and to PF00512 HisKA, score 88.8, E-value 1.5E-023; two-component sensor histidine kinase 802655..804952 Arcobacter butzleri RM4018 5624149 YP_001489729.1 CDS Abu_0795 NC_009850.1 804929 805339 R Pfam match to PF00293 NUDIX, score 67.6, E-value 3.6E-017; MutT/nudix family protein complement(804929..805339) Arcobacter butzleri RM4018 5624150 YP_001489730.1 CDS Abu_0796 NC_009850.1 805416 806186 R hypothetical protein complement(805416..806186) Arcobacter butzleri RM4018 5624151 YP_001489731.1 CDS Abu_0797 NC_009850.1 806179 806541 R hypothetical protein complement(806179..806541) Arcobacter butzleri RM4018 5623764 YP_001489732.1 CDS Abu_0798 NC_009850.1 806534 806890 R hypothetical protein complement(806534..806890) Arcobacter butzleri RM4018 5623765 YP_001489733.1 CDS Abu_0799 NC_009850.1 806999 808273 D Pfam match to PF01094 ANF_receptor, score 48.2, E-value 2E-006; urea/short-chain amide ABC transporter, periplasmic urea/short-chain amide-binding protein 806999..808273 Arcobacter butzleri RM4018 5623766 YP_001489734.1 CDS Abu_0800 NC_009850.1 808330 809934 D Pfam match to PF02653 BPD_transp_2, score 99.1, E-value 3E-021; urea/short-chain amide ABC transporter, permease 808330..809934 Arcobacter butzleri RM4018 5623767 YP_001489735.1 CDS Abu_0801 NC_009850.1 809938 811044 D Pfam match to PF02653 BPD_transp_2, score 73, E-value 6E-014; ABC transporter, permease 809938..811044 Arcobacter butzleri RM4018 5623768 YP_001489736.1 CDS Abu_0802 NC_009850.1 811046 811834 D Pfam match to PF00005 ABC_tran, score 154.2, E-value 3.1E-043; ABC transporter, ATP-binding protein 811046..811834 Arcobacter butzleri RM4018 5623769 YP_001489737.1 CDS Abu_0803 NC_009850.1 811964 812659 D Pfam match to PF00005 ABC_tran, score 140.3, E-value 4.9E-039; ABC transporter, ATP-binding protein 811964..812659 Arcobacter butzleri RM4018 5623770 YP_001489738.1 CDS Abu_0804 NC_009850.1 812786 813775 D hypothetical protein 812786..813775 Arcobacter butzleri RM4018 5623771 YP_001489739.1 CDS ureD NC_009850.1 813947 814699 D Pfam match to PF01774 UreD, score 64.7, E-value 1.4E-019; urease accessory protein UreD 813947..814699 Arcobacter butzleri RM4018 5623772 YP_001489740.1 CDS ureAB NC_009850.1 814709 815386 D Pfam matches to PF00547 Urease_gamma, score 222.2, E-value 1E-063, and to PF00699 Urease_beta, score 220.9, E-value 2.5E-063; fusion of urease beta and gamma subunits 814709..815386 Arcobacter butzleri RM4018 5623773 YP_001489741.1 CDS ureC NC_009850.1 815388 817088 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 815388..817088 Arcobacter butzleri RM4018 5623774 YP_001489742.1 CDS ureE NC_009850.1 817098 817544 D urease accessory protein 817098..817544 Arcobacter butzleri RM4018 5623775 YP_001489743.1 CDS ureF NC_009850.1 817489 818232 D Pfam match to PF01730 UreF, score -23.9, E-value 9.1E-005; urease complex component 817489..818232 Arcobacter butzleri RM4018 5623402 YP_001489744.1 CDS ureG NC_009850.1 818368 818955 D Pfam match to PF02492 cobW, score 193.7, E-value 6.7E-056; urease accessory protein UreG 818368..818955 Arcobacter butzleri RM4018 5623403 YP_001489745.1 CDS Abu_0811 NC_009850.1 819152 819715 R hypothetical protein complement(819152..819715) Arcobacter butzleri RM4018 5623404 YP_001489746.1 CDS Abu_0812 NC_009850.1 819827 820420 D Pfam match to PF00440 TetR_N, score 31.5, E-value 2.2E-008; TetR family transcriptional regulator 819827..820420 Arcobacter butzleri RM4018 5623405 YP_001489747.1 CDS Abu_0813 NC_009850.1 820430 823558 R hydrophobe/amphiphile efflux-1 family protein complement(820430..823558) Arcobacter butzleri RM4018 5623406 YP_001489748.1 CDS Abu_0814 NC_009850.1 823561 824619 R Pfam match to PF00529 HlyD, score 70.6, E-value 1.5E-018; multidrug efflux RND membrane fusion protein complement(823561..824619) Arcobacter butzleri RM4018 5623407 YP_001489749.1 CDS Abu_0815 NC_009850.1 824616 825851 R Pfam match to PF02321 OEP, score 76.7, E-value 6.5E-020; outer membrane efflux protein complement(824616..825851) Arcobacter butzleri RM4018 5623408 YP_001489750.1 CDS Abu_0816 NC_009850.1 825933 826436 D Pfam match to PF01047 MarR, score 36.1, E-value 1E-009; MarR family transcriptional regulator 825933..826436 Arcobacter butzleri RM4018 5623409 YP_001489751.1 CDS Abu_0817 NC_009850.1 826517 826735 D hypothetical protein 826517..826735 Arcobacter butzleri RM4018 5623410 YP_001489752.1 CDS Abu_0818 NC_009850.1 826753 826941 R hypothetical protein complement(826753..826941) Arcobacter butzleri RM4018 5623411 YP_001489753.1 CDS Abu_0819 NC_009850.1 826954 827073 R hypothetical protein complement(826954..827073) Arcobacter butzleri RM4018 5623412 YP_001489754.1 CDS Abu_0820 NC_009850.1 827157 828812 D Pfam match to PF00990 GGDEF, score 183.2, E-value 5.9E-052; GGDEF domain-containing protein 827157..828812 Arcobacter butzleri RM4018 5623413 YP_001489755.1 CDS xth NC_009850.1 828809 829597 R Pfam match to PF03372 Exo_endo_phos, score 173.8, E-value 3.9E-049; exodeoxyribonuclease complement(828809..829597) Arcobacter butzleri RM4018 5623365 YP_001489756.1 CDS Abu_0822 NC_009850.1 829597 829845 R hypothetical protein complement(829597..829845) Arcobacter butzleri RM4018 5623366 YP_001489757.1 CDS Abu_0823 NC_009850.1 829944 830666 D Pfam match to PF01925 DUF81, score 19.5, E-value 1.2E-006; hypothetical protein 829944..830666 Arcobacter butzleri RM4018 5623367 YP_001489758.1 CDS Abu_0824 NC_009850.1 830707 831003 R hypothetical protein complement(830707..831003) Arcobacter butzleri RM4018 5623368 YP_001489759.1 CDS Abu_0825 NC_009850.1 831007 831531 R Pfam match to PF08212 Lipocalin_2, score 220.3, E-value 3.9E-063; outer membrane lipoprotein complement(831007..831531) Arcobacter butzleri RM4018 5623369 YP_001489760.1 CDS Abu_0826 NC_009850.1 831694 832929 D Pfam match to PF04055 Radical_SAM, score 35.9, E-value 1.3E-007; hypothetical protein 831694..832929 Arcobacter butzleri RM4018 5623370 YP_001489761.1 CDS Abu_0827 NC_009850.1 832926 833657 D hypothetical protein 832926..833657 Arcobacter butzleri RM4018 5623371 YP_001489762.1 CDS Abu_0828 NC_009850.1 833647 834978 R Pfam match to PF03109 ABC1, score 84.6, E-value 2.8E-022; ABC transporter protein complement(833647..834978) Arcobacter butzleri RM4018 5623372 YP_001489763.1 CDS Abu_0829 NC_009850.1 835203 835550 R hypothetical protein complement(835203..835550) Arcobacter butzleri RM4018 5623373 YP_001489764.1 CDS Abu_0830 NC_009850.1 835477 836547 R Pfam match to PF00563 EAL, score 170.5, E-value 3.8E-048; EAL domain-containing protein complement(835477..836547) Arcobacter butzleri RM4018 5623374 YP_001489765.1 CDS Abu_0831 NC_009850.1 836612 837319 R Pfam matches to PF00072 Response_reg, score 107.9, E-value 1.3E-032, and to PF04397 LytTR, score 84.9, E-value 2.3E-022; two-component response regulator complement(836612..837319) Arcobacter butzleri RM4018 5623375 YP_001489766.1 CDS Abu_0832 NC_009850.1 837316 838311 R Pfam match to PF06580 His_kinase, score 100, E-value 6.4E-027; two-component sensor histidine kinase complement(837316..838311) Arcobacter butzleri RM4018 5623376 YP_001489767.1 CDS Abu_0833 NC_009850.1 838339 839754 R carotenoid isomerase complement(838339..839754) Arcobacter butzleri RM4018 5624489 YP_001489768.1 CDS phrB NC_009850.1 839741 841093 R Pfam matches to PF03441 FAD_binding_7, score 272.4, E-value 8.4E-079, and to PF00875 DNA_photolyase, score 37.7, E-value 1.5E-008; deoxyribodipyrimidine photolyase complement(839741..841093) Arcobacter butzleri RM4018 5624490 YP_001489769.1 CDS Abu_0835 NC_009850.1 841090 842043 R Pfam matches to PF08349 DUF1722, score 144.6, E-value 2.5E-040, and to PF04463 DUF523, score 72.3, E-value 1.4E-018; hypothetical protein complement(841090..842043) Arcobacter butzleri RM4018 5624491 YP_001489770.1 CDS Abu_0836 NC_009850.1 842169 843080 R Pfam match to PF03547 Auxin_eff, score 52.2, E-value 4.4E-016; auxin efflux carrier protein complement(842169..843080) Arcobacter butzleri RM4018 5624492 YP_001489771.1 CDS Abu_0837 NC_009850.1 843082 843570 R Pfam match to PF04074 DUF386, score 64.7, E-value 2.8E-016; hypothetical protein complement(843082..843570) Arcobacter butzleri RM4018 5624493 YP_001489772.1 CDS pgi NC_009850.1 843579 844811 R catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase complement(843579..844811) Arcobacter butzleri RM4018 5624494 YP_001489773.1 CDS galU NC_009850.1 844811 845668 R Pfam match to PF00483 NTP_transferase, score 48.4, E-value 2.7E-013; UTP--glucose-1-phosphate uridylyltransferase complement(844811..845668) Arcobacter butzleri RM4018 5624495 YP_001489774.1 CDS Abu_0840 NC_009850.1 845670 847046 R Pfam matches to PF02878 PGM_PMM_I, score 130.5, E-value 4.3E-036, and to PF02879 PGM_PMM_II, score 121, E-value 3.1E-033, and to PF00408 PGM_PMM_IV, score 66, E-value 4.5E-018, and to PF02880 PGM_PMM_III, score 60.4, E-value 5.3E-015; phosphohexosemutase complement(845670..847046) Arcobacter butzleri RM4018 5624496 YP_001489775.1 CDS Abu_0846 NC_009850.1 853283 854683 D Pfam match to PF00015 MCPsignal, score 171.9, E-value 1.5E-048; methyl-accepting chemotaxis protein 853283..854683 Arcobacter butzleri RM4018 5623454 YP_001489776.1 CDS Abu_0847 NC_009850.1 854693 855097 D Pfam match to PF08447 PAS_3, score 46.7, E-value 3.1E-012; methyl-accepting chemotaxis protein 854693..855097 Arcobacter butzleri RM4018 5623455 YP_001489777.1 CDS Abu_0848 NC_009850.1 855121 855333 R Pfam match to PF01361 Tautomerase, score 61.5, E-value 1.4E-018; tautomerase complement(855121..855333) Arcobacter butzleri RM4018 5623456 YP_001489778.1 CDS Abu_0849 NC_009850.1 855424 856254 D Pfam matches to PF00126 HTH_1, score 65.2, E-value 1.9E-016, and to PF03466 LysR_substrate, score 38.7, E-value 1.9E-008; LysR family transcriptional regulator 855424..856254 Arcobacter butzleri RM4018 5623457 YP_001489779.1 CDS trpC NC_009850.1 856251 857042 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase complement(856251..857042) Arcobacter butzleri RM4018 5623458 YP_001489780.1 CDS Abu_0851 NC_009850.1 857039 858346 R hypothetical protein complement(857039..858346) Arcobacter butzleri RM4018 5623459 YP_001489781.1 CDS Abu_0852 NC_009850.1 858322 858705 R Pfam match to PF03692 UPF0153, score 53.4, E-value 6.8E-013; hypothetical protein complement(858322..858705) Arcobacter butzleri RM4018 5623460 YP_001489782.1 CDS Abu_0853 NC_009850.1 858698 859414 R hypothetical protein complement(858698..859414) Arcobacter butzleri RM4018 5623461 YP_001489783.1 CDS oorD NC_009850.1 859644 859967 D Pfam match to PF00037 Fer4, score 29.5, E-value 7.6E-006; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 859644..859967 Arcobacter butzleri RM4018 5623462 YP_001489784.1 CDS oorA NC_009850.1 859976 861106 D Pfam match to PF01855 POR_N, score 303, E-value 4.9E-088; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 859976..861106 Arcobacter butzleri RM4018 5623463 YP_001489785.1 CDS oorB NC_009850.1 861108 861941 D Pfam match to PF02775 TPP_enzyme_C, score 176.5, E-value 6.3E-055; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 861108..861941 Arcobacter butzleri RM4018 5623464 YP_001489786.1 CDS oorC NC_009850.1 861949 862533 D Pfam match to PF01558 POR, score 95.2, E-value 1.8E-025; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 861949..862533 Arcobacter butzleri RM4018 5625165 YP_001489787.1 CDS dnaQ3 NC_009850.1 862557 863375 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(862557..863375) Arcobacter butzleri RM4018 5625166 YP_001489788.1 CDS trpF NC_009850.1 863362 863955 R Pfam match to PF00697 PRAI, score 130.6, E-value 3.9E-036; N-(5'phosphoribosyl)anthranilate isomerase complement(863362..863955) Arcobacter butzleri RM4018 5625167 YP_001489789.1 CDS rpe NC_009850.1 863952 864593 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(863952..864593) Arcobacter butzleri RM4018 5625168 YP_001489790.1 CDS pldA NC_009850.1 864701 865711 D Pfam match to PF02253 PLA1, score 173.8, E-value 4E-049; outer membrane phospholipase A 864701..865711 Arcobacter butzleri RM4018 5625169 YP_001489791.1 CDS Abu_0862 NC_009850.1 865721 866143 R hypothetical protein complement(865721..866143) Arcobacter butzleri RM4018 5625170 YP_001489792.1 CDS Abu_0863 NC_009850.1 866146 866727 R Pfam match to PF00293 NUDIX, score 55.6, E-value 1.5E-013; hypothetical protein complement(866146..866727) Arcobacter butzleri RM4018 5625171 YP_001489793.1 CDS Abu_0864 NC_009850.1 866739 867239 R Pfam match to PF04461 DUF520, score 198.8, E-value 1.2E-056; hypothetical protein complement(866739..867239) Arcobacter butzleri RM4018 5625172 YP_001489794.1 CDS Abu_0865 NC_009850.1 867289 868044 R hypothetical protein complement(867289..868044) Arcobacter butzleri RM4018 5625173 YP_001489795.1 CDS Abu_0866 NC_009850.1 868045 868428 R Pfam match to PF04241 DUF423, score 122.3, E-value 1.2E-033; hypothetical protein complement(868045..868428) Arcobacter butzleri RM4018 5625174 YP_001489796.1 CDS Abu_0867 NC_009850.1 868441 868887 R Pfam match to PF00156 Pribosyltran, score 36.6, E-value 8E-008; nucleotide phosphoribosyltransferase complement(868441..868887) Arcobacter butzleri RM4018 5625175 YP_001489797.1 CDS Abu_0868 NC_009850.1 869002 869646 D hypothetical protein 869002..869646 Arcobacter butzleri RM4018 5625176 YP_001489798.1 CDS Abu_0869 NC_009850.1 869649 869849 R hypothetical protein complement(869649..869849) Arcobacter butzleri RM4018 5625232 YP_001489799.1 CDS Abu_0870 NC_009850.1 869853 870533 R Pfam match to PF01168 Ala_racemase_N, score 19.7, E-value 4.3E-008; hypothetical protein complement(869853..870533) Arcobacter butzleri RM4018 5625233 YP_001489800.1 CDS Abu_0871 NC_009850.1 870545 871603 R Pfam match to PF02163 Peptidase_M50, score 251.6, E-value 1.5E-072; membrane-associated zinc metalloprotease complement(870545..871603) Arcobacter butzleri RM4018 5625234 YP_001489801.1 CDS pgsA NC_009850.1 871613 872158 R Pfam match to PF01066 CDP-OH_P_transf, score 106.9, E-value 5.6E-029; CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyltransferase complement(871613..872158) Arcobacter butzleri RM4018 5625235 YP_001489802.1 CDS Abu_0873 NC_009850.1 872158 872937 R Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase complement(872158..872937) Arcobacter butzleri RM4018 5625236 YP_001489803.1 CDS dapA NC_009850.1 872937 873824 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(872937..873824) Arcobacter butzleri RM4018 5625237 YP_001489804.1 CDS Abu_0875 NC_009850.1 873848 875182 R Pfam matches to PF05193 Peptidase_M16_C, score 151.8, E-value 1.7E-042, and to PF00675 Peptidase_M16, score 79.1, E-value 1.1E-021; zinc protease complement(873848..875182) Arcobacter butzleri RM4018 5625238 YP_001489805.1 CDS pyrD NC_009850.1 875182 876240 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(875182..876240) Arcobacter butzleri RM4018 5625239 YP_001489806.1 CDS msbA NC_009850.1 876284 877993 R Pfam matches to PF00005 ABC_tran, score 182.4, E-value 1E-051, and to PF00664 ABC_membrane, score 135.5, E-value 1.4E-037; multidrug resistance protein MsbA complement(876284..877993) Arcobacter butzleri RM4018 5625240 YP_001489807.1 CDS mviN NC_009850.1 878051 879352 R Pfam match to PF03023 MVIN, score 317, E-value 3.1E-092; virulence factor MviN protein complement(878051..879352) Arcobacter butzleri RM4018 5625241 YP_001489808.1 CDS Abu_0879 NC_009850.1 879352 880932 R Pfam match to PF03372 Exo_endo_phos, score 62.1, E-value 2.4E-017; endonuclease/exonuclease/phosphatase complement(879352..880932) Arcobacter butzleri RM4018 5625242 YP_001489809.1 CDS perR NC_009850.1 881116 881520 D Pfam match to PF01475 FUR, score 86, E-value 1E-022; peroxide stress regulator 881116..881520 Arcobacter butzleri RM4018 5625243 YP_001489810.1 CDS Abu_0881 NC_009850.1 881545 881967 R Pfam match to PF02130 UPF0054, score 137.4, E-value 3.6E-038; metalloprotease complement(881545..881967) Arcobacter butzleri RM4018 5624980 YP_001489811.1 CDS Abu_0882 NC_009850.1 882058 882462 D hypothetical protein 882058..882462 Arcobacter butzleri RM4018 5624981 YP_001489812.1 CDS Abu_0883 NC_009850.1 882468 883094 R Pfam match to PF03575 Peptidase_S51, score 217.4, E-value 2.8E-062; S51 family peptidase complement(882468..883094) Arcobacter butzleri RM4018 5624982 YP_001489813.1 CDS radA NC_009850.1 883110 884459 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(883110..884459) Arcobacter butzleri RM4018 5624983 YP_001489814.1 CDS Abu_0885 NC_009850.1 884577 885140 D Pfam match to PF05728 UPF0227, score 139.8, E-value 6.6E-039; hypothetical protein 884577..885140 Arcobacter butzleri RM4018 5624984 YP_001489815.1 CDS Abu_0886 NC_009850.1 885240 886157 D Pfam match to PF03150 CCP_MauG, score 224.8, E-value 1.7E-064; cytochrome c peroxidase 885240..886157 Arcobacter butzleri RM4018 5624985 YP_001489816.1 CDS Abu_0887 NC_009850.1 886135 888615 D Pfam matches to PF00563 EAL, score 345.5, E-value 8E-101, and to PF00990 GGDEF, score 187, E-value 4.3E-053, and to PF00989 PAS, score 39.9, E-value 1.4E-011; EAL/GGDEF/PAS domain-containing protein 886135..888615 Arcobacter butzleri RM4018 5624986 YP_001489817.1 CDS Abu_0888 NC_009850.1 888617 889459 R hypothetical protein complement(888617..889459) Arcobacter butzleri RM4018 5624987 YP_001489818.1 CDS ftsY NC_009850.1 889477 890406 R Pfam match to PF00448 SRP54, score 373.5, E-value 3E-109; signal recognition particle-docking GTPase FtsY complement(889477..890406) Arcobacter butzleri RM4018 5624988 YP_001489819.1 CDS Abu_0890 NC_009850.1 890419 890970 R Pfam match to PF08534 Redoxin, score 72.9, E-value 9.1E-019; lipoprotein thiredoxin complement(890419..890970) Arcobacter butzleri RM4018 5624989 YP_001489820.1 CDS Abu_0891 NC_009850.1 891032 891568 D Pfam match to PF01812 5-FTHF_cyc-lig, score 73.7, E-value 5.3E-019; 5-formyltetrahydrofolate cyclo-ligase 891032..891568 Arcobacter butzleri RM4018 5624990 YP_001489821.1 CDS Abu_0892 NC_009850.1 891581 893125 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 891581..893125 Arcobacter butzleri RM4018 5624991 YP_001489822.1 CDS Abu_0893 NC_009850.1 893144 893737 D Pfam match to PF03602 Cons_hypoth95, score 131.7, E-value 1.9E-036; methyltransferase 893144..893737 Arcobacter butzleri RM4018 5624834 YP_001489823.1 CDS Abu_0894 NC_009850.1 893697 894542 D Pfam match to PF00528 BPD_transp_1, score 113.6, E-value 5.3E-031; ABC transporter, permease 893697..894542 Arcobacter butzleri RM4018 5624835 YP_001489824.1 CDS Abu_0895 NC_009850.1 894582 895013 D hypothetical protein 894582..895013 Arcobacter butzleri RM4018 5624836 YP_001489825.1 CDS Abu_0896 NC_009850.1 895010 895345 R hypothetical protein complement(895010..895345) Arcobacter butzleri RM4018 5624837 YP_001489826.1 CDS Abu_0897 NC_009850.1 895423 895563 D hypothetical protein 895423..895563 Arcobacter butzleri RM4018 5624838 YP_001489827.1 CDS Abu_0898 NC_009850.1 895563 895790 D Pfam match to PF07927 YcfA, score 58.5, E-value 2E-014; hypothetical protein 895563..895790 Arcobacter butzleri RM4018 5624839 YP_001489828.1 CDS Abu_0899 NC_009850.1 895885 896706 R Pfam match to PF00106 adh_short, score 17.5, E-value 2.5E-007; short chain dehydrogenase/reductase family oxidoreductase complement(895885..896706) Arcobacter butzleri RM4018 5624840 YP_001489829.1 CDS Abu_0900 NC_009850.1 896778 897560 D hypothetical protein 896778..897560 Arcobacter butzleri RM4018 5624841 YP_001489830.1 CDS Abu_0901 NC_009850.1 897584 898894 D hypothetical protein 897584..898894 Arcobacter butzleri RM4018 5624842 YP_001489831.1 CDS Abu_0902 NC_009850.1 898912 899988 D cytochrome c family protein 898912..899988 Arcobacter butzleri RM4018 5624843 YP_001489832.1 CDS Abu_0903 NC_009850.1 900004 900948 D methyl-accepting chemotaxis protein 900004..900948 Arcobacter butzleri RM4018 5624844 YP_001489833.1 CDS Abu_0904 NC_009850.1 900945 901607 D Pfam matches to PF00072 Response_reg, score 104.3, E-value 1.6E-031, and to PF00486 Trans_reg_C, score 43.7, E-value 5.7E-010; two-component response regulator 900945..901607 Arcobacter butzleri RM4018 5624845 YP_001489834.1 CDS Abu_0905 NC_009850.1 901594 902742 D Pfam match to PF02518 HATPase_c, score 92.2, E-value 1.5E-024; two-component sensor histidine kinase 901594..902742 Arcobacter butzleri RM4018 5624390 YP_001489835.1 CDS Abu_0906 NC_009850.1 902800 903645 D Pfam matches to PF01729 QRPTase_C, score 112, E-value 1.6E-030, and to PF02749 QRPTase_N, score 38.1, E-value 2.7E-008; molybdenum transport system protein ModD 902800..903645 Arcobacter butzleri RM4018 5624391 YP_001489836.1 CDS Abu_0907 NC_009850.1 903659 904774 R Pfam match to PF00990 GGDEF, score 164.2, E-value 5E-047; GGDEF domain-containing protein complement(903659..904774) Arcobacter butzleri RM4018 5624392 YP_001489837.1 CDS Abu_0908 NC_009850.1 904796 905239 R Pfam match to PF02637 GatB_Yqey, score 99.2, E-value 1.1E-026; GatB/YqeY family protein complement(904796..905239) Arcobacter butzleri RM4018 5624393 YP_001489838.1 CDS Abu_0909 NC_009850.1 905278 907227 R Pfam match to PF00005 ABC_tran, score 169.8, E-value 6.1E-048; ABC transporter, ATP-binding protein complement(905278..907227) Arcobacter butzleri RM4018 5624394 YP_001489839.1 CDS Abu_0910 NC_009850.1 907385 907993 D hypothetical protein 907385..907993 Arcobacter butzleri RM4018 5624395 YP_001489840.1 CDS Abu_0911 NC_009850.1 908008 908601 R Pfam match to PF03486 HI0933_like, score 23.5, E-value 1.5E-006; hypothetical protein complement(908008..908601) Arcobacter butzleri RM4018 5624396 YP_001489841.1 CDS Abu_0912 NC_009850.1 908683 909384 R Pfam match to PF00561 Abhydrolase_1, score 27.6, E-value 1.6E-007; hypothetical protein complement(908683..909384) Arcobacter butzleri RM4018 5624397 YP_001489842.1 CDS Abu_0913 NC_009850.1 909766 911067 R hypothetical protein complement(909766..911067) Arcobacter butzleri RM4018 5624398 YP_001489843.1 CDS Abu_0914 NC_009850.1 911155 911502 R hypothetical protein complement(911155..911502) Arcobacter butzleri RM4018 5624399 YP_001489844.1 CDS Abu_0915 NC_009850.1 911511 912020 R hypothetical protein complement(911511..912020) Arcobacter butzleri RM4018 5624400 YP_001489845.1 CDS Abu_0916 NC_009850.1 912108 913811 D Pfam match to PF02696 UPF0061, score 58.7, E-value 1.1E-015; hypothetical protein 912108..913811 Arcobacter butzleri RM4018 5624401 YP_001489846.1 CDS Abu_0917 NC_009850.1 914024 914365 R Pfam match to PF07883 Cupin_2, score 78.7, E-value 1.7E-020; hypothetical protein complement(914024..914365) Arcobacter butzleri RM4018 5624674 YP_001489847.1 CDS Abu_0918 NC_009850.1 914443 914805 R hypothetical protein complement(914443..914805) Arcobacter butzleri RM4018 5624675 YP_001489848.1 CDS Abu_0919 NC_009850.1 914821 915606 R hypothetical protein complement(914821..915606) Arcobacter butzleri RM4018 5624676 YP_001489849.1 CDS Abu_0920 NC_009850.1 915954 916547 R hypothetical protein complement(915954..916547) Arcobacter butzleri RM4018 5624677 YP_001489850.1 CDS guaA NC_009850.1 916582 918117 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(916582..918117) Arcobacter butzleri RM4018 5624678 YP_001489851.1 CDS nadB NC_009850.1 918182 919633 R Pfam match to PF00890 FAD_binding_2, score 229, E-value 9.4E-066; L-aspartate oxidase complement(918182..919633) Arcobacter butzleri RM4018 5624679 YP_001489852.1 CDS Abu_0923 NC_009850.1 919732 920148 D hypothetical protein 919732..920148 Arcobacter butzleri RM4018 5624680 YP_001489853.1 CDS Abu_0924 NC_009850.1 920132 920725 R Pfam match to PF01863 DUF45, score 148.9, E-value 1.2E-041; hypothetical protein complement(920132..920725) Arcobacter butzleri RM4018 5624681 YP_001489854.1 CDS aspB3 NC_009850.1 920807 921973 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 920807..921973 Arcobacter butzleri RM4018 5623344 YP_001489855.1 CDS Abu_0926 NC_009850.1 921977 922870 D Pfam match to PF01545 Cation_efflux, score 271, E-value 2.2E-078; cation efflux protein 921977..922870 Arcobacter butzleri RM4018 5623345 YP_001489856.1 CDS Abu_0927 NC_009850.1 922929 925262 D Pfam matches to PF01966 HD, score 39.4, E-value 1.2E-009, and to PF01590 GAF, score 35.5, E-value 1.7E-007, and to PF00753 Lactamase_B, score 22.8, E-value 1.9E-006; hypothetical protein 922929..925262 Arcobacter butzleri RM4018 5623346 YP_001489857.1 CDS cyaA NC_009850.1 925249 927420 D Pfam matches to PF00211 Guanylate_cyc, score 119.1, E-value 1.2E-032, and to PF05226 CHASE2, score 109.4, E-value 9.4E-030; adenylate/guanylate cyclase 925249..927420 Arcobacter butzleri RM4018 5623347 YP_001489858.1 CDS Abu_0929 NC_009850.1 927417 928730 R hypothetical protein complement(927417..928730) Arcobacter butzleri RM4018 5623348 YP_001489859.1 CDS Abu_0930 NC_009850.1 928739 929929 R hypothetical protein complement(928739..929929) Arcobacter butzleri RM4018 5623349 YP_001489860.1 CDS Abu_0931 NC_009850.1 930114 931301 D Pfam match to PF01757 Acyl_transf_3, score 3.3, E-value 2.3E-005; hypothetical protein 930114..931301 Arcobacter butzleri RM4018 5623350 YP_001489861.1 CDS Abu_0932 NC_009850.1 931348 932262 D hypothetical protein 931348..932262 Arcobacter butzleri RM4018 5623351 YP_001489862.1 CDS Abu_0933 NC_009850.1 932302 933549 D Pfam match to PF07690 MFS_1, score 127.6, E-value 3.2E-035; major facilitator superfamily protein, oxalate:formate antiporter 932302..933549 Arcobacter butzleri RM4018 5623352 YP_001489863.1 CDS Abu_0934 NC_009850.1 933647 934372 D hypothetical protein 933647..934372 Arcobacter butzleri RM4018 5624682 YP_001489864.1 CDS cbiM NC_009850.1 934374 934976 D Pfam match to PF01891 CbiM, score 63.2, E-value 8E-016; cobalamin (vitamin B12) biosynthesis protein 934374..934976 Arcobacter butzleri RM4018 5623122 YP_001489865.1 CDS Abu_0936 NC_009850.1 934973 935449 D hypothetical protein 934973..935449 Arcobacter butzleri RM4018 5623503 YP_001489866.1 CDS Abu_0937 NC_009850.1 935446 936090 D Pfam match to PF02361 CbiQ, score 9.9, E-value 8E-005; cobalt ABC transporter, permease 935446..936090 Arcobacter butzleri RM4018 5623517 YP_001489867.1 CDS Abu_0938 NC_009850.1 936087 936737 D Pfam match to PF00005 ABC_tran, score 189.9, E-value 5.7E-054; cobalt ABC transporter, ATP-binding protein 936087..936737 Arcobacter butzleri RM4018 5623518 YP_001489868.1 CDS Abu_0939 NC_009850.1 936838 938466 D Pfam matches to PF08479 POTRA_2, score 98.6, E-value 1.7E-026, and to PF03865 ShlB, score -85.3, E-value 4.8E-011; hemolysin activation protein HecB 936838..938466 Arcobacter butzleri RM4018 5623519 YP_001489869.1 CDS Abu_0940 NC_009850.1 938478 947579 D Pfam match to PF05860 Haemagg_act, score 134.4, E-value 2.9E-037; adhesin/hemagglutinin 938478..947579 Arcobacter butzleri RM4018 5623520 YP_001489870.1 CDS Abu_0941 NC_009850.1 947591 948460 D hypothetical protein 947591..948460 Arcobacter butzleri RM4018 5623521 YP_001489871.1 CDS Abu_0942 NC_009850.1 948482 949264 D hypothetical protein 948482..949264 Arcobacter butzleri RM4018 5623522 YP_001489872.1 CDS Abu_0943 NC_009850.1 949266 951644 D hypothetical protein 949266..951644 Arcobacter butzleri RM4018 5623523 YP_001489873.1 CDS Abu_0944 NC_009850.1 951646 952374 D hypothetical protein 951646..952374 Arcobacter butzleri RM4018 5623524 YP_001489874.1 CDS Abu_0945 NC_009850.1 952410 952658 D hypothetical protein 952410..952658 Arcobacter butzleri RM4018 5623525 YP_001489875.1 CDS Abu_0946 NC_009850.1 952661 953377 D hypothetical protein 952661..953377 Arcobacter butzleri RM4018 5623526 YP_001489876.1 CDS Abu_0947 NC_009850.1 953396 954052 D hypothetical protein 953396..954052 Arcobacter butzleri RM4018 5623527 YP_001489877.1 CDS Abu_0948 NC_009850.1 954128 954688 D hypothetical protein 954128..954688 Arcobacter butzleri RM4018 5623528 YP_001489878.1 CDS Abu_0949 NC_009850.1 954747 955133 R hypothetical protein complement(954747..955133) Arcobacter butzleri RM4018 5624751 YP_001489879.1 CDS Abu_0950 NC_009850.1 955144 955962 R hypothetical protein complement(955144..955962) Arcobacter butzleri RM4018 5624752 YP_001489880.1 CDS Abu_0951 NC_009850.1 956182 956934 R hypothetical protein complement(956182..956934) Arcobacter butzleri RM4018 5624753 YP_001489881.1 CDS Abu_0952 NC_009850.1 957100 958230 D hypothetical protein 957100..958230 Arcobacter butzleri RM4018 5624754 YP_001489882.1 CDS Abu_0953 NC_009850.1 958265 959350 D Pfam match to PF01594 UPF0118, score 117.8, E-value 2.9E-032; permease 958265..959350 Arcobacter butzleri RM4018 5624755 YP_001489883.1 CDS Abu_0954 NC_009850.1 959381 959944 D hypothetical protein 959381..959944 Arcobacter butzleri RM4018 5624756 YP_001489884.1 CDS Abu_0955 NC_009850.1 959953 960357 D hypothetical protein 959953..960357 Arcobacter butzleri RM4018 5624757 YP_001489885.1 CDS Abu_0956 NC_009850.1 960373 962736 R hypothetical protein complement(960373..962736) Arcobacter butzleri RM4018 5624758 YP_001489886.1 CDS Abu_0957 NC_009850.1 962866 963222 D hypothetical protein 962866..963222 Arcobacter butzleri RM4018 5624759 YP_001489887.1 CDS uvrA NC_009850.1 963270 966083 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(963270..966083) Arcobacter butzleri RM4018 5624760 YP_001489888.1 CDS Abu_0959 NC_009850.1 966185 966736 R hypothetical protein complement(966185..966736) Arcobacter butzleri RM4018 5624761 YP_001489889.1 CDS Abu_0960 NC_009850.1 967016 967426 D Pfam match to PF08447 PAS_3, score 41.7, E-value 7.5E-011; methyl-accepting chemotaxis protein 967016..967426 Arcobacter butzleri RM4018 5624762 YP_001489890.1 CDS ggt NC_009850.1 967475 969232 R Pfam match to PF01019 G_glu_transpept, score 637.4, E-value 1.1E-188; gamma-glutamyltranspeptidase complement(967475..969232) Arcobacter butzleri RM4018 5624921 YP_001489891.1 CDS Abu_0962 NC_009850.1 969416 970015 R Pfam match to PF01925 DUF81, score -3.2, E-value 1.8E-005; hypothetical protein complement(969416..970015) Arcobacter butzleri RM4018 5624922 YP_001489892.1 CDS cysE NC_009850.1 970156 970890 R serine acetyltransferase complement(970156..970890) Arcobacter butzleri RM4018 5624923 YP_001489893.1 CDS speA NC_009850.1 970880 972691 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(970880..972691) Arcobacter butzleri RM4018 5624924 YP_001489894.1 CDS hisS NC_009850.1 972692 973933 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(972692..973933) Arcobacter butzleri RM4018 5624925 YP_001489895.1 CDS tmk NC_009850.1 973923 974492 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(973923..974492) Arcobacter butzleri RM4018 5624926 YP_001489896.1 CDS coaD NC_009850.1 974483 974977 R Pfam match to PF01467 CTP_transf_2, score 105.1, E-value 9.2E-030; phosphopantetheine adenylyltransferase complement(974483..974977) Arcobacter butzleri RM4018 5624927 YP_001489897.1 CDS ubiD NC_009850.1 974982 975536 R Pfam match to PF02441 Flavoprotein, score 127.7, E-value 3E-035; phenylacrylic acid decarboxylase complement(974982..975536) Arcobacter butzleri RM4018 5624928 YP_001489898.1 CDS Abu_0969 NC_009850.1 975747 976373 D resolvase family site-specific recombinase 975747..976373 Arcobacter butzleri RM4018 5624929 YP_001489899.1 CDS rplI NC_009850.1 976447 976893 D Pfam matches to PF01281 Ribosomal_L9_N, score 73.5, E-value 6.1E-019, and to PF03948 Ribosomal_L9_C, score 65.5, E-value 2.7E-018; 50S ribosomal protein L9 976447..976893 Arcobacter butzleri RM4018 5624930 YP_001489900.1 CDS hslV NC_009850.1 976899 977435 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 976899..977435 Arcobacter butzleri RM4018 5624931 YP_001489901.1 CDS hslU NC_009850.1 977443 978771 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 977443..978771 Arcobacter butzleri RM4018 5624932 YP_001489902.1 CDS Abu_0973 NC_009850.1 978824 979129 D hypothetical protein 978824..979129 Arcobacter butzleri RM4018 5623353 YP_001489903.1 CDS Abu_0974 NC_009850.1 979287 979931 D Pfam match to PF01026 TatD_DNase, score 239.5, E-value 6.7E-069. Possible pseudogene/truncated protein. G:A transition (Met:Ile) at bp 979145 results in a potential start codon shift to bp 979287. N-terminal sequence downstream of ly mutated start codon at 979143 corresponds to N-terminal sequences of similar proteins in T. denitrificans and W. succinogenes. Good RBS present at bp 979132-979137.; TatD-related deoxyribonuclease 979287..979931 Arcobacter butzleri RM4018 5623354 YP_001489904.1 CDS Abu_0975 NC_009850.1 979967 981226 D Pfam matches to PF01464 SLT, score 74.5, E-value 3.1E-019, and to PF01476 LysM, score 52, E-value 1.9E-012; lytic murein transglycosylase 979967..981226 Arcobacter butzleri RM4018 5623355 YP_001489905.1 CDS rlpA NC_009850.1 981210 982154 D Pfam matches to PF03330 DPBB_1, score 151.8, E-value 1.7E-042, and to PF05036 SPOR, score 36.6, E-value 2.7E-010; rare lipoprotein A 981210..982154 Arcobacter butzleri RM4018 5623356 YP_001489906.1 CDS hisB NC_009850.1 982164 982736 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 982164..982736 Arcobacter butzleri RM4018 5623357 YP_001489907.1 CDS Abu_0978 NC_009850.1 982733 983230 D Pfam match to PF08282 Hydrolase_3, score 29.9, E-value 3.1E-009; HAD-superfamily phosphatase 982733..983230 Arcobacter butzleri RM4018 5623358 YP_001489908.1 CDS Abu_0979 NC_009850.1 983221 983763 D hypothetical protein 983221..983763 Arcobacter butzleri RM4018 5623359 YP_001489909.1 CDS Abu_0980 NC_009850.1 983763 984257 D Pfam match to PF03968 OstA, score 62.4, E-value 1.4E-015; OstA family protein 983763..984257 Arcobacter butzleri RM4018 5623360 YP_001489910.1 CDS Abu_0981 NC_009850.1 984257 984859 D Pfam match to PF01926 MMR_HSR1, score 88.3, E-value 2.1E-023; ATP /GTP binding protein 984257..984859 Arcobacter butzleri RM4018 5623361 YP_001489911.1 CDS Abu_0982 NC_009850.1 984849 985310 D catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 984849..985310 Arcobacter butzleri RM4018 5623362 YP_001489912.1 CDS Abu_0983 NC_009850.1 985376 985852 D Pfam matches to PF08281 Sigma70_r4_2, score 61.6, E-value 3.4E-017, and to PF04542 Sigma70_r2, score 32, E-value 1.9E-006; ECF subfamily RNA polymerase sigma factor 985376..985852 Arcobacter butzleri RM4018 5623363 YP_001489913.1 CDS Abu_0984 NC_009850.1 985853 986821 D Pfam match to PF04773 FecR, score 80.4, E-value 5.2E-021; sigma factor regulatory protein FecR/PupR family 985853..986821 Arcobacter butzleri RM4018 5623364 YP_001489914.1 CDS Abu_0985 NC_009850.1 986960 989317 D Pfam matches to PF00593 TonB_dep_Rec, score 79.6, E-value 8.7E-021, and to PF07715 Plug, score 41.8, E-value 2.2E-009; TonB-dependent receptor protein 986960..989317 Arcobacter butzleri RM4018 5624102 YP_001489915.1 CDS argC NC_009850.1 989362 990318 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase complement(989362..990318) Arcobacter butzleri RM4018 5624103 YP_001489916.1 CDS Abu_0987 NC_009850.1 990374 991738 R Pfam match to PF00392 GntR, score 54.6, E-value 1E-015; GntR family transcriptional regulator complement(990374..991738) Arcobacter butzleri RM4018 5624104 YP_001489917.1 CDS Abu_0988 NC_009850.1 991829 992194 D FMN-binding protein 991829..992194 Arcobacter butzleri RM4018 5624105 YP_001489918.1 CDS Abu_0989 NC_009850.1 992207 992806 D Pfam match to PF01243 Pyridox_oxidase, score 28.3, E-value 2.5E-005; antibiotic resistance protein 992207..992806 Arcobacter butzleri RM4018 5624106 YP_001489919.1 CDS Abu_0990 NC_009850.1 992814 994469 R Pfam match to PF00873 ACR_tran, score 35, E-value 1E-009; AcrB/AcrD/AcrF family protein complement(992814..994469) Arcobacter butzleri RM4018 5624107 YP_001489920.1 CDS Abu_0991 NC_009850.1 994466 996028 R Pfam match to PF00873 ACR_tran, score 62.2, E-value 4.6E-017; AcrB/AcrD/AcrF family protein complement(994466..996028) Arcobacter butzleri RM4018 5624108 YP_001489921.1 CDS Abu_0992 NC_009850.1 996015 996740 R Pfam match to PF00529 HlyD, score 38.2, E-value 6.7E-010; AcrA/AcrE family protein complement(996015..996740) Arcobacter butzleri RM4018 5624109 YP_001489922.1 CDS Abu_0993 NC_009850.1 996737 998089 R Pfam match to PF02321 OEP, score 60.5, E-value 5E-015; outer membrane efflux protein complement(996737..998089) Arcobacter butzleri RM4018 5624110 YP_001489923.1 CDS Abu_0994 NC_009850.1 998218 1000161 R Pfam matches to PF01966 HD, score 111.9, E-value 1.7E-030, and to PF08447 PAS_3, score 68.1, E-value 3.9E-018; response regulator receiver complement(998218..1000161) Arcobacter butzleri RM4018 5624111 YP_001489924.1 CDS fliP NC_009850.1 1000190 1000915 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(1000190..1000915) Arcobacter butzleri RM4018 5624112 YP_001489925.1 CDS pbpC NC_009850.1 1000991 1002772 R Pfam matches to PF00905 Transpeptidase, score 230.4, E-value 3.5E-066, and to PF03717 PBP_dimer, score 108.6, E-value 1.7E-029; penicillin-binding protein complement(1000991..1002772) Arcobacter butzleri RM4018 5624113 YP_001489926.1 CDS Abu_0997 NC_009850.1 1002769 1003197 R hypothetical protein complement(1002769..1003197) Arcobacter butzleri RM4018 5624725 YP_001489927.1 CDS Abu_0998 NC_009850.1 1003206 1004480 R Pfam match to PF01551 Peptidase_M23, score 63.9, E-value 2.3E-020; hypothetical protein complement(1003206..1004480) Arcobacter butzleri RM4018 5624726 YP_001489928.1 CDS ftsX NC_009850.1 1004473 1005285 R cell division protein FtsX complement(1004473..1005285) Arcobacter butzleri RM4018 5624727 YP_001489929.1 CDS ftsE NC_009850.1 1005272 1005934 R Pfam match to PF00005 ABC_tran, score 166.3, E-value 7.1E-047; cell division ATP-binding protein FtsE complement(1005272..1005934) Arcobacter butzleri RM4018 5624728 YP_001489930.1 CDS trmB NC_009850.1 1005931 1007124 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1005931..1007124) Arcobacter butzleri RM4018 5624729 YP_001489931.1 CDS Abu_1002 NC_009850.1 1007132 1008394 R Pfam match to PF00041 fn3, score 31.5, E-value 2.1E-008; fibronectin type III domain-containing protein complement(1007132..1008394) Arcobacter butzleri RM4018 5624730 YP_001489932.1 CDS rluD NC_009850.1 1008342 1009328 R Pfam matches to PF00849 PseudoU_synth_2, score 177.2, E-value 3.8E-050, and to PF01479 S4, score 39.1, E-value 1.4E-008; ribosomal large subunit pseudouridine synthase D complement(1008342..1009328) Arcobacter butzleri RM4018 5624731 YP_001489933.1 CDS mrdB NC_009850.1 1009348 1010457 D Pfam match to PF01098 FTSW_RODA_SPOVE, score 300.1, E-value 3.8E-087; rod shape-determining protein RodA 1009348..1010457 Arcobacter butzleri RM4018 5624732 YP_001489934.1 CDS Abu_1005 NC_009850.1 1010481 1011260 R hypothetical protein complement(1010481..1011260) Arcobacter butzleri RM4018 5624733 YP_001489935.1 CDS hemL NC_009850.1 1011293 1012573 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1011293..1012573 Arcobacter butzleri RM4018 5624734 YP_001489936.1 CDS Abu_1007 NC_009850.1 1012587 1012901 D Pfam match to PF06865 DUF1255, score 168.4, E-value 1.7E-047; hypothetical protein 1012587..1012901 Arcobacter butzleri RM4018 5624735 YP_001489937.1 CDS Abu_1008 NC_009850.1 1012912 1013220 D hypothetical protein 1012912..1013220 Arcobacter butzleri RM4018 5624736 YP_001489938.1 CDS Abu_1009 NC_009850.1 1013159 1013755 D hypothetical protein 1013159..1013755 Arcobacter butzleri RM4018 5625153 YP_001489939.1 CDS Abu_1010 NC_009850.1 1013764 1014450 R hypothetical protein complement(1013764..1014450) Arcobacter butzleri RM4018 5625154 YP_001489940.1 CDS rpoD NC_009850.1 1014453 1016333 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(1014453..1016333) Arcobacter butzleri RM4018 5625155 YP_001489941.1 CDS leuD NC_009850.1 1016501 1017001 D Pfam match to PF00694 Aconitase_C, score 68.1, E-value 2.5E-017; 3-isopropylmalate dehydratase, small subunit 1016501..1017001 Arcobacter butzleri RM4018 5625156 YP_001489942.1 CDS leuB NC_009850.1 1017002 1018069 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1017002..1018069 Arcobacter butzleri RM4018 5625157 YP_001489943.1 CDS Abu_1014 NC_009850.1 1018091 1019020 D Pfam match to PF02272 DHHA1, score 19.7, E-value 7.2E-005; exopolyphosphatase-related protein 1018091..1019020 Arcobacter butzleri RM4018 5625158 YP_001489944.1 CDS Abu_1015 NC_009850.1 1019031 1019390 R Pfam match to PF01230 HIT, score 25.1, E-value 8E-008; HIT family protein complement(1019031..1019390) Arcobacter butzleri RM4018 5625159 YP_001489945.1 CDS rpmJ NC_009850.1 1019615 1019728 D Pfam match to PF00444 Ribosomal_L36, score 34.9, E-value 2E-003; 50S ribosomal protein L36 1019615..1019728 Arcobacter butzleri RM4018 5625160 YP_001489946.1 CDS rpsM NC_009850.1 1019734 1020102 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1019734..1020102 Arcobacter butzleri RM4018 5625161 YP_001489947.1 CDS rpsK NC_009850.1 1020113 1020505 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1020113..1020505 Arcobacter butzleri RM4018 5625162 YP_001489948.1 CDS rpsD NC_009850.1 1020516 1021142 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1020516..1021142 Arcobacter butzleri RM4018 5625163 YP_001489949.1 CDS rpoA NC_009850.1 1021160 1022158 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1021160..1022158 Arcobacter butzleri RM4018 5625164 YP_001489950.1 CDS rplQ NC_009850.1 1022173 1022523 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1022173..1022523 Arcobacter butzleri RM4018 5624164 YP_001489951.1 CDS gatA NC_009850.1 1022677 1024038 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1022677..1024038 Arcobacter butzleri RM4018 5624165 YP_001489952.1 CDS guaB NC_009850.1 1024058 1025503 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 1024058..1025503 Arcobacter butzleri RM4018 5624166 YP_001489953.1 CDS Abu_1024 NC_009850.1 1025653 1026105 D Pfam match to PF07883 Cupin_2, score 33.9, E-value 5E-007; hypothetical protein 1025653..1026105 Arcobacter butzleri RM4018 5624167 YP_001489954.1 CDS Abu_1025 NC_009850.1 1026129 1026626 R hypothetical protein complement(1026129..1026626) Arcobacter butzleri RM4018 5624168 YP_001489955.1 CDS Abu_1026 NC_009850.1 1026680 1028254 R Pfam match to PF00497 SBP_bac_3, score 74.6, E-value 2.8E-019; two-component sensor histidine kinase complement(1026680..1028254) Arcobacter butzleri RM4018 5624169 YP_001489956.1 CDS Abu_1027 NC_009850.1 1028265 1028939 R Pfam matches to PF00072 Response_reg, score 76.1, E-value 7.3E-023, and to PF00486 Trans_reg_C, score 57.5, E-value 4.1E-014; two-component response regulator complement(1028265..1028939) Arcobacter butzleri RM4018 5624170 YP_001489957.1 CDS Abu_1028 NC_009850.1 1029118 1030917 D Pfam match to PF02321 OEP, score 27.4, E-value 4.6E-005; outer membrane efflux protein 1029118..1030917 Arcobacter butzleri RM4018 5624171 YP_001489958.1 CDS Abu_1029 NC_009850.1 1030927 1031640 D hypothetical protein 1030927..1031640 Arcobacter butzleri RM4018 5624172 YP_001489959.1 CDS Abu_1030 NC_009850.1 1031657 1039210 D Pfam matches to PF05345 He_PIG, score 40.6, E-value 7.8E-011, and to PF00028 Cadherin, score 38.5, E-value 1.9E-010; hypothetical protein 1031657..1039210 Arcobacter butzleri RM4018 5624173 YP_001489960.1 CDS Abu_1031 NC_009850.1 1039230 1040576 D hypothetical protein 1039230..1040576 Arcobacter butzleri RM4018 5624174 YP_001489961.1 CDS Abu_1032 NC_009850.1 1040576 1042696 D Pfam match to PF02163 Peptidase_M50, score 10.4, E-value 8.8E-005; M50 family peptidase 1040576..1042696 Arcobacter butzleri RM4018 5624175 YP_001489962.1 CDS Abu_1033 NC_009850.1 1042726 1043208 R Pfam match to PF00226 DnaJ, score 39.7, E-value 3.4E-011; DnaJ domain-containing protein complement(1042726..1043208) Arcobacter butzleri RM4018 5624013 YP_001489963.1 CDS Abu_1034 NC_009850.1 1043296 1043562 D Pfam match to PF00226 DnaJ, score 27.6, E-value 1.3E-007; DnaJ domain-containing protein 1043296..1043562 Arcobacter butzleri RM4018 5624014 YP_001489964.1 CDS Abu_1035 NC_009850.1 1043575 1044669 D Pfam match to PF00933 Glyco_hydro_3, score 108.8, E-value 3.9E-031; glycosyl hydrolase 1043575..1044669 Arcobacter butzleri RM4018 5624015 YP_001489965.1 CDS Abu_1036 NC_009850.1 1044673 1046580 R Pfam matches to PF02518 HATPase_c, score 58.7, E-value 1.8E-014, and to PF07695 7TMR-DISM_7TM, score 35, E-value 2.4E-007; two-component sensor histidine kinase complement(1044673..1046580) Arcobacter butzleri RM4018 5624016 YP_001489966.1 CDS Abu_1037 NC_009850.1 1046583 1047254 R Pfam matches to PF00072 Response_reg, score 61.6, E-value 2.1E-018, and to PF00486 Trans_reg_C, score 33.6, E-value 6.4E-007; two-component response regulator complement(1046583..1047254) Arcobacter butzleri RM4018 5624017 YP_001489967.1 CDS Abu_1038 NC_009850.1 1047373 1047885 R hypothetical protein complement(1047373..1047885) Arcobacter butzleri RM4018 5624018 YP_001489968.1 CDS Abu_1039 NC_009850.1 1048005 1048793 R Pfam match to PF00005 ABC_tran, score 79.8, E-value 7.6E-021; ABC transporter, ATP-binding protein complement(1048005..1048793) Arcobacter butzleri RM4018 5624019 YP_001489969.1 CDS Abu_1040 NC_009850.1 1048932 1049411 D Pfam match to PF08281 Sigma70_r4_2, score 50.3, E-value 6.8E-014; ECF subfamily RNA polymerase sigma factor 1048932..1049411 Arcobacter butzleri RM4018 5624020 YP_001489970.1 CDS Abu_1041 NC_009850.1 1049408 1050346 D Pfam match to PF04773 FecR, score 56.7, E-value 7.1E-014; sigma factor regulatory protein FecR/PupR family 1049408..1050346 Arcobacter butzleri RM4018 5624021 YP_001489971.1 CDS Abu_1042 NC_009850.1 1050422 1051477 D Pfam matches to PF00107 ADH_zinc_N, score 117.2, E-value 4.1E-032, and to PF08240 ADH_N, score 74.1, E-value 4E-019; NADP-dependent alcohol dehydrogenase 1050422..1051477 Arcobacter butzleri RM4018 5624022 YP_001489972.1 CDS Abu_1043 NC_009850.1 1051503 1052123 D hypothetical protein 1051503..1052123 Arcobacter butzleri RM4018 5624023 YP_001489973.1 CDS Abu_1044 NC_009850.1 1052120 1052713 R Pfam match to PF00027 cNMP_binding, score 27.1, E-value 5.7E-005; cyclic nucleotide-binding protein complement(1052120..1052713) Arcobacter butzleri RM4018 5624024 YP_001489974.1 CDS Abu_1045 NC_009850.1 1052826 1053707 D Pfam match to PF00892 DUF6, score 73.2, E-value 7.5E-019; hypothetical protein 1052826..1053707 Arcobacter butzleri RM4018 5623575 YP_001489975.1 CDS Abu_1046 NC_009850.1 1053711 1054076 R Pfam match to PF01638 DUF24, score 126.6, E-value 5.9E-040; hypothetical protein complement(1053711..1054076) Arcobacter butzleri RM4018 5623576 YP_001489976.1 CDS Abu_1047 NC_009850.1 1054174 1054713 D Pfam match to PF02525 Flavodoxin_2, score 148.1, E-value 3.9E-044; hypothetical protein 1054174..1054713 Arcobacter butzleri RM4018 5623577 YP_001489977.1 CDS Abu_1048 NC_009850.1 1054736 1056091 R Pfam match to PF00939 Na_sulph_symp, score -198.5, E-value 4.2E-006; sodium:sulfate symporter complement(1054736..1056091) Arcobacter butzleri RM4018 5623578 YP_001489978.1 CDS sugE NC_009850.1 1056125 1056442 R Pfam match to PF00893 Multi_Drug_Res, score 157.1, E-value 4.2E-044; suppresses groEL, may be chaperone complement(1056125..1056442) Arcobacter butzleri RM4018 5623579 YP_001489979.1 CDS Abu_1050 NC_009850.1 1056578 1057459 D Pfam match to PF00892 DUF6, score 61.1, E-value 3.2E-015; transporter 1056578..1057459 Arcobacter butzleri RM4018 5623580 YP_001489980.1 CDS Abu_1051 NC_009850.1 1057474 1058280 D Pfam match to PF00165 HTH_AraC, score 43.7, E-value 5.6E-010; AraC family transcriptional regulator 1057474..1058280 Arcobacter butzleri RM4018 5623581 YP_001489981.1 CDS Abu_1052 NC_009850.1 1058345 1058869 D Pfam match to PF01161 PBP, score 33.2, E-value 8.1E-008; hypothetical protein 1058345..1058869 Arcobacter butzleri RM4018 5623582 YP_001489982.1 CDS Abu_1053 NC_009850.1 1058872 1059741 R Pfam matches to PF03466 LysR_substrate, score 82.5, E-value 1.2E-021, and to PF00126 HTH_1, score 49.9, E-value 2.1E-012; LysR family transcriptional regulator complement(1058872..1059741) Arcobacter butzleri RM4018 5623583 YP_001489983.1 CDS Abu_1054 NC_009850.1 1059841 1060863 D Pfam match to PF03601 Cons_hypoth698, score 364.4, E-value 1.6E-106; integral membrane protein 1059841..1060863 Arcobacter butzleri RM4018 5623584 YP_001489984.1 CDS Abu_1055 NC_009850.1 1060882 1061622 R periplasmic protein complement(1060882..1061622) Arcobacter butzleri RM4018 5623585 YP_001489985.1 CDS Abu_1056 NC_009850.1 1061709 1062611 R Pfam match to PF03547 Auxin_eff, score 112.8, E-value 1.3E-034; auxin efflux carrier protein complement(1061709..1062611) Arcobacter butzleri RM4018 5623586 YP_001489986.1 CDS Abu_1057 NC_009850.1 1062615 1062986 R Pfam match to PF01638 DUF24, score 119.1, E-value 1.4E-037; hypothetical protein complement(1062615..1062986) Arcobacter butzleri RM4018 5623332 YP_001489987.1 CDS Abu_1058 NC_009850.1 1063121 1063702 D Pfam match to PF02525 Flavodoxin_2, score 127.4, E-value 6.2E-038; flavodoxin-like fold domain-containing protein 1063121..1063702 Arcobacter butzleri RM4018 5623333 YP_001489988.1 CDS Abu_1059 NC_009850.1 1063712 1064008 D Pfam match to PF03992 ABM, score 48.2, E-value 2.5E-011; hypothetical protein 1063712..1064008 Arcobacter butzleri RM4018 5623334 YP_001489989.1 CDS Abu_1060 NC_009850.1 1064021 1065046 D Pfam match to PF00724 Oxidored_FMN, score 270.5, E-value 3E-078; NADH:flavin oxidoreductase/NADH oxidase 1064021..1065046 Arcobacter butzleri RM4018 5623335 YP_001489990.1 CDS Abu_1061 NC_009850.1 1065064 1065960 D Pfam match to PF00892 DUF6, score 79.5, E-value 9.8E-021; hypothetical protein 1065064..1065960 Arcobacter butzleri RM4018 5623336 YP_001489991.1 CDS Abu_1062 NC_009850.1 1065988 1066623 D Pfam match to PF00881 Nitroreductase, score 173.4, E-value 5.3E-049; NAD(P)H-flavin nitroreductase 1065988..1066623 Arcobacter butzleri RM4018 5623337 YP_001489992.1 CDS Abu_1063 NC_009850.1 1066736 1068229 D hypothetical protein 1066736..1068229 Arcobacter butzleri RM4018 5623338 YP_001489993.1 CDS Abu_1064 NC_009850.1 1068311 1069909 D Pfam match to PF00005 ABC_tran, score 156.9, E-value 4.8E-044; ABC transporter, ATP-binding protein 1068311..1069909 Arcobacter butzleri RM4018 5623339 YP_001489994.1 CDS Abu_1065 NC_009850.1 1069964 1070440 R Pfam match to PF03061 4HBT, score 68.7, E-value 1.8E-018; acyl-CoA thioester hydrolase complement(1069964..1070440) Arcobacter butzleri RM4018 5623340 YP_001489995.1 CDS Abu_1066 NC_009850.1 1070530 1072491 R Pfam match to PF00015 MCPsignal, score 160.7, E-value 3.4E-045; methyl-accepting chemotaxis protein complement(1070530..1072491) Arcobacter butzleri RM4018 5623341 YP_001489996.1 CDS ligA NC_009850.1 1072587 1074533 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(1072587..1074533) Arcobacter butzleri RM4018 5623342 YP_001489997.1 CDS Abu_1068 NC_009850.1 1074549 1075727 R Pfam match to PF03738 GSP_synth, score 594.4, E-value 9.8E-176; glutathionylspermidine synthase complement(1074549..1075727) Arcobacter butzleri RM4018 5623343 YP_001489998.1 CDS Abu_1069 NC_009850.1 1075731 1076372 R hypothetical protein complement(1075731..1076372) Arcobacter butzleri RM4018 5624316 YP_001489999.1 CDS dgt NC_009850.1 1076506 1077951 D Pfam match to PF01966 HD, score 25.8, E-value 4.9E-005; deoxyguanosinetriphosphate triphosphohydrolase 1076506..1077951 Arcobacter butzleri RM4018 5624317 YP_001490000.1 CDS mloA NC_009850.1 1078224 1079300 D Pfam match to PF02661 Fic, score 72.3, E-value 7E-014; similar to MloA; hypothetical protein 1078224..1079300 Arcobacter butzleri RM4018 5624318 YP_001490001.1 CDS Abu_1072 NC_009850.1 1079392 1080663 D hypothetical protein 1079392..1080663 Arcobacter butzleri RM4018 5624319 YP_001490002.1 CDS aroE NC_009850.1 1081122 1081916 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(1081122..1081916) Arcobacter butzleri RM4018 5624320 YP_001490003.1 CDS Abu_1074 NC_009850.1 1081919 1082530 R Pfam match to PF08241 Methyltransf_11, score 82.1, E-value 1.6E-021; methyltransferase complement(1081919..1082530) Arcobacter butzleri RM4018 5624321 YP_001490004.1 CDS Abu_1075 NC_009850.1 1082591 1083259 D Pfam match to PF02578 DUF152, score 167.4, E-value 3.3E-047; hypothetical protein 1082591..1083259 Arcobacter butzleri RM4018 5624322 YP_001490005.1 CDS maeA NC_009850.1 1083354 1084613 D Pfam matches to PF03949 Malic_M, score 344.3, E-value 1.8E-100, and to PF00390 malic, score 255.6, E-value 9.5E-074; NAD-dependent malic enzyme 1083354..1084613 Arcobacter butzleri RM4018 5624323 YP_001490006.1 CDS purU NC_009850.1 1084681 1085514 D Pfam match to PF00551 Formyl_trans_N, score 187.6, E-value 2.8E-053; formyltetrahydrofolate deformylase 1084681..1085514 Arcobacter butzleri RM4018 5624324 YP_001490007.1 CDS Abu_1078 NC_009850.1 1085516 1085980 D Pfam match to PF00588 SpoU_methylase, score 148.3, E-value 1.8E-041; RNA methylase 1085516..1085980 Arcobacter butzleri RM4018 5624325 YP_001490008.1 CDS Abu_1079 NC_009850.1 1085973 1086200 R hypothetical protein complement(1085973..1086200) Arcobacter butzleri RM4018 5624326 YP_001490009.1 CDS Abu_1080 NC_009850.1 1086187 1087950 R Pfam match to PF02690 Na_Pi_cotrans, score 89.9, E-value 6.9E-024; sodium:phosphate cotransporter complement(1086187..1087950) Arcobacter butzleri RM4018 5624327 YP_001490010.1 CDS Abu_1081 NC_009850.1 1088081 1088461 D hypothetical protein 1088081..1088461 Arcobacter butzleri RM4018 5625384 YP_001490011.1 CDS Abu_1082 NC_009850.1 1088464 1088805 D hypothetical protein 1088464..1088805 Arcobacter butzleri RM4018 5625385 YP_001490012.1 CDS Abu_1083 NC_009850.1 1088806 1089468 D Pfam matches to PF00072 Response_reg, score 101.6, E-value 1.1E-030, and to PF00486 Trans_reg_C, score 52.1, E-value 1.7E-012; two-component response regulator 1088806..1089468 Arcobacter butzleri RM4018 5625386 YP_001490013.1 CDS Abu_1084 NC_009850.1 1089458 1090312 D Pfam match to PF02518 HATPase_c, score 45.6, E-value 1.5E-010; two-component sensor histidine kinase 1089458..1090312 Arcobacter butzleri RM4018 5625387 YP_001490014.1 CDS Abu_1085 NC_009850.1 1090356 1091285 D Pfam match to PF01145 Band_7, score 241.4, E-value 1.8E-069; protease 1090356..1091285 Arcobacter butzleri RM4018 5625388 YP_001490015.1 CDS Abu_1086 NC_009850.1 1091263 1091703 D Pfam match to PF01957 NfeD, score 25.3, E-value 2.9E-006; hypothetical protein 1091263..1091703 Arcobacter butzleri RM4018 5625389 YP_001490016.1 CDS Abu_1087 NC_009850.1 1091734 1092114 R Pfam match to PF02579 Nitro_FeMo-Co, score 28.6, E-value 2E-005; hypothetical protein complement(1091734..1092114) Arcobacter butzleri RM4018 5625390 YP_001490017.1 CDS cydB NC_009850.1 1092225 1093355 R Pfam match to PF02322 Cyto_ox_2, score 27.3, E-value 1.1E-013; cytochrome bd oxidase, subunit II complement(1092225..1093355) Arcobacter butzleri RM4018 5625391 YP_001490018.1 CDS cydA NC_009850.1 1093357 1094883 R Pfam match to PF01654 Bac_Ubq_Cox, score 600.9, E-value 1.1E-177; cytochrome bd oxidase, subunit I complement(1093357..1094883) Arcobacter butzleri RM4018 5625392 YP_001490019.1 CDS Abu_1090 NC_009850.1 1094899 1095105 R hypothetical protein complement(1094899..1095105) Arcobacter butzleri RM4018 5625393 YP_001490020.1 CDS Abu_1091 NC_009850.1 1095264 1095692 R hypothetical protein complement(1095264..1095692) Arcobacter butzleri RM4018 5625394 YP_001490021.1 CDS Abu_1092 NC_009850.1 1095715 1096875 R hypothetical protein complement(1095715..1096875) Arcobacter butzleri RM4018 5625395 YP_001490022.1 CDS Abu_1093 NC_009850.1 1096978 1097520 R Pfam match to PF08238 Sel1, score 53, E-value 9.3E-013; TPR repeat-containing SEL1 subfamily protein complement(1096978..1097520) Arcobacter butzleri RM4018 5624968 YP_001490023.1 CDS Abu_1094 NC_009850.1 1097735 1097956 D hypothetical protein 1097735..1097956 Arcobacter butzleri RM4018 5624969 YP_001490024.1 CDS aat NC_009850.1 1097953 1098621 R Pfam match to PF03588 Leu_Phe_trans, score 253.4, E-value 4.3E-073; leucyl/phenylalanyl-tRNA--protein transferase complement(1097953..1098621) Arcobacter butzleri RM4018 5624970 YP_001490025.1 CDS rsuA NC_009850.1 1098680 1099366 D Pfam match to PF00849 PseudoU_synth_2, score 63.7, E-value 5.4E-016; ribosomal small subunit pseudouridine synthase A 1098680..1099366 Arcobacter butzleri RM4018 5624971 YP_001490026.1 CDS Abu_1097 NC_009850.1 1099363 1099989 R Pfam match to PF00702 Hydrolase, score 98.3, E-value 1E-027; HAD-superfamily hydrolase complement(1099363..1099989) Arcobacter butzleri RM4018 5624972 YP_001490027.1 CDS Abu_1098 NC_009850.1 1100305 1100808 D hypothetical protein 1100305..1100808 Arcobacter butzleri RM4018 5624973 YP_001490028.1 CDS Abu_1099 NC_009850.1 1100808 1101518 D hypothetical protein 1100808..1101518 Arcobacter butzleri RM4018 5624974 YP_001490029.1 CDS Abu_1100 NC_009850.1 1101546 1101731 D hypothetical protein 1101546..1101731 Arcobacter butzleri RM4018 5624975 YP_001490030.1 CDS Abu_1101 NC_009850.1 1101751 1103670 D Pfam matches to PF07715 Plug, score 71.3, E-value 2.8E-018, and to PF00593 TonB_dep_Rec, score 55.6, E-value 1.5E-013; TonB-dependent receptor protein 1101751..1103670 Arcobacter butzleri RM4018 5624976 YP_001490031.1 CDS Abu_1102 NC_009850.1 1103672 1104502 D Pfam match to PF01497 Peripla_BP_2, score 63.1, E-value 3.4E-017; iron compound ABC transporter, periplasmic substrate-binding protein 1103672..1104502 Arcobacter butzleri RM4018 5624977 YP_001490032.1 CDS Abu_1103 NC_009850.1 1104480 1105181 D Pfam match to PF00005 ABC_tran, score 84.7, E-value 3.4E-023; iron compound ABC transporter, ATP-binding protein 1104480..1105181 Arcobacter butzleri RM4018 5624978 YP_001490033.1 CDS Abu_1104 NC_009850.1 1105178 1106140 D Pfam match to PF01032 FecCD, score 173.7, E-value 4.2E-049; iron compound ABC transporter, permease 1105178..1106140 Arcobacter butzleri RM4018 5624979 YP_001490034.1 CDS Abu_1105 NC_009850.1 1106134 1106625 R Pfam match to PF00300 PGAM, score 76.4, E-value 8E-020; phosphohistidine phosphatase complement(1106134..1106625) Arcobacter butzleri RM4018 5623671 YP_001490035.1 CDS Abu_1106 NC_009850.1 1106638 1108407 R Pfam match to PF00005 ABC_tran, score 166.4, E-value 6.6E-047; ABC transporter, ATP-binding protein complement(1106638..1108407) Arcobacter butzleri RM4018 5623672 YP_001490036.1 CDS Abu_1107 NC_009850.1 1108503 1108751 D hypothetical protein 1108503..1108751 Arcobacter butzleri RM4018 5623673 YP_001490037.1 CDS Abu_1108 NC_009850.1 1108741 1109406 D Pfam matches to PF00072 Response_reg, score 82.5, E-value 8.1E-025, and to PF00486 Trans_reg_C, score 79.5, E-value 9.6E-021; two-component response regulator 1108741..1109406 Arcobacter butzleri RM4018 5623674 YP_001490038.1 CDS Abu_1109 NC_009850.1 1109363 1110550 D Pfam matches to PF02518 HATPase_c, score 84.1, E-value 3.9E-022, and to PF00512 HisKA, score 41.7, E-value 2.4E-009; two-component sensor histidine kinase 1109363..1110550 Arcobacter butzleri RM4018 5623675 YP_001490039.1 CDS Abu_1110 NC_009850.1 1110544 1110885 D hypothetical protein 1110544..1110885 Arcobacter butzleri RM4018 5623676 YP_001490040.1 CDS Abu_1111 NC_009850.1 1110956 1111414 D Pfam match to PF05433 Rick_17kDa_Anti, score 31.8, E-value 2.1E-006; hypothetical protein 1110956..1111414 Arcobacter butzleri RM4018 5623677 YP_001490041.1 CDS Abu_1112 NC_009850.1 1111442 1112257 R hypothetical protein complement(1111442..1112257) Arcobacter butzleri RM4018 5623678 YP_001490042.1 CDS Abu_1113 NC_009850.1 1112315 1112830 D Pfam match to PF00929 Exonuc_X-T, score 20.6, E-value 1.7E-005; hypothetical protein 1112315..1112830 Arcobacter butzleri RM4018 5623679 YP_001490043.1 CDS Abu_1114 NC_009850.1 1112840 1113715 R Pfam match to PF00990 GGDEF, score 149.7, E-value 7.3E-043; GGDEF domain-containing protein complement(1112840..1113715) Arcobacter butzleri RM4018 5623680 YP_001490044.1 CDS Abu_1115 NC_009850.1 1113909 1114223 D Pfam match to PF01381 HTH_3, score 64.1, E-value 8.2E-017; hypothetical protein 1113909..1114223 Arcobacter butzleri RM4018 5623681 YP_001490045.1 CDS Abu_1116 NC_009850.1 1114230 1115285 R Pfam matches to PF00270 DEAD, score 144.4, E-value 2.7E-040, and to PF00271 Helicase_C, score 105.8, E-value 5.3E-035. Possible pseudogene/truncated protein. G:A transition (Met:Ile) at bp 1115517 results in a potential start codon shift to bp 1115285. Possible RBS present at bp 1115527-1115532.; ATP-dependent RNA helicase RhlE complement(1114230..1115285) Arcobacter butzleri RM4018 5623682 YP_001490046.1 CDS Abu_1117 NC_009850.1 1115668 1117047 D Pfam match to PF02518 HATPase_c, score 82.4, E-value 1.3E-021; two-component sensor histidine kinase 1115668..1117047 Arcobacter butzleri RM4018 5623937 YP_001490047.1 CDS Abu_1118 NC_009850.1 1117044 1117733 D Pfam matches to PF00072 Response_reg, score 107.8, E-value 1.4E-032, and to PF00486 Trans_reg_C, score 44.4, E-value 3.5E-010; two-component response regulator 1117044..1117733 Arcobacter butzleri RM4018 5623938 YP_001490048.1 CDS Abu_1119 NC_009850.1 1118036 1120600 D Pfam matches to PF00691 OmpA, score 87.6, E-value 3.5E-023, and to PF02321 OEP, score 78.1, E-value 2.6E-020; hypothetical protein 1118036..1120600 Arcobacter butzleri RM4018 5623939 YP_001490049.1 CDS Abu_1120 NC_009850.1 1120626 1122788 D Pfam matches to PF00005 ABC_tran, score 185, E-value 1.6E-052, and to PF00664 ABC_membrane, score 33.5, E-value 1.1E-008; ABC transporter, transmembrane region 1120626..1122788 Arcobacter butzleri RM4018 5623940 YP_001490050.1 CDS Abu_1121 NC_009850.1 1122781 1124250 D Pfam match to PF00529 HlyD, score 46.2, E-value 9.8E-011; HlyD family secretion protein 1122781..1124250 Arcobacter butzleri RM4018 5623941 YP_001490051.1 CDS Abu_1122 NC_009850.1 1124257 1124850 D Pfam match to PF00196 GerE, score 59.3, E-value 5E-016; two-component response regulator 1124257..1124850 Arcobacter butzleri RM4018 5623942 YP_001490052.1 CDS Abu_1123 NC_009850.1 1124920 1125519 D hypothetical protein 1124920..1125519 Arcobacter butzleri RM4018 5623943 YP_001490053.1 CDS Abu_1124 NC_009850.1 1125516 1127390 D Pfam matches to PF00563 EAL, score -66.7, E-value 3.1E-006, and to PF00990 GGDEF, score -26.6, E-value 4.6E-005, and to PF00672 HAMP, score 26.5, E-value 8.8E-005; EAL/GGDEF/HAMP domain-containing protein 1125516..1127390 Arcobacter butzleri RM4018 5623944 YP_001490054.1 CDS aroB NC_009850.1 1127464 1128498 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1127464..1128498 Arcobacter butzleri RM4018 5623945 YP_001490055.1 CDS Abu_1126 NC_009850.1 1128500 1130239 D Pfam match to PF00924 MS_channel, score 102.1, E-value 1.6E-027; hypothetical protein 1128500..1130239 Arcobacter butzleri RM4018 5623946 YP_001490056.1 CDS Abu_1127 NC_009850.1 1130243 1131511 D Pfam matches to PF00919 UPF0004, score 109.3, E-value 9.9E-030, and to PF04055 Radical_SAM, score 79.4, E-value 1E-020; MiaB-like tRNA modifying enzyme 1130243..1131511 Arcobacter butzleri RM4018 5623947 YP_001490057.1 CDS ftsH2 NC_009850.1 1131492 1132964 D Pfam match to PF00004 AAA, score 265.9, E-value 4E-080; cell division protein FtsH 1131492..1132964 Arcobacter butzleri RM4018 5623948 YP_001490058.1 CDS Abu_1129 NC_009850.1 1132951 1133469 D hypothetical protein 1132951..1133469 Arcobacter butzleri RM4018 5623209 YP_001490059.1 CDS mog NC_009850.1 1133466 1134002 D Pfam match to PF00994 MoCF_biosynth, score 126.2, E-value 1.9E-036; molybdenum cofactor biosynthesis protein Mog 1133466..1134002 Arcobacter butzleri RM4018 5623210 YP_001490060.1 CDS ribB NC_009850.1 1134017 1134631 R Pfam match to PF00926 DHBP_synthase, score 338.4, E-value 1.1E-098; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(1134017..1134631) Arcobacter butzleri RM4018 5623211 YP_001490061.1 CDS Abu_1132 NC_009850.1 1134991 1135575 D hypothetical protein 1134991..1135575 Arcobacter butzleri RM4018 5623212 YP_001490062.1 CDS Abu_1133 NC_009850.1 1135585 1136109 D Pfam match to PF00300 PGAM, score 36.5, E-value 8.7E-008; hypothetical protein 1135585..1136109 Arcobacter butzleri RM4018 5623213 YP_001490063.1 CDS Abu_1134 NC_009850.1 1136127 1136366 D hypothetical protein 1136127..1136366 Arcobacter butzleri RM4018 5623214 YP_001490064.1 CDS Abu_1135 NC_009850.1 1136363 1139695 D hypothetical protein 1136363..1139695 Arcobacter butzleri RM4018 5623215 YP_001490065.1 CDS Abu_1136 NC_009850.1 1139700 1140113 D hypothetical protein 1139700..1140113 Arcobacter butzleri RM4018 5623216 YP_001490066.1 CDS Abu_1137 NC_009850.1 1140127 1140372 R Pfam match to PF01381 HTH_3, score 31.9, E-value 6.1E-008; hypothetical protein complement(1140127..1140372) Arcobacter butzleri RM4018 5623217 YP_001490067.1 CDS Abu_1138 NC_009850.1 1140468 1140710 D hypothetical protein 1140468..1140710 Arcobacter butzleri RM4018 5623218 YP_001490068.1 CDS Abu_1139 NC_009850.1 1140762 1141241 D hypothetical protein 1140762..1141241 Arcobacter butzleri RM4018 5623219 YP_001490069.1 CDS Abu_1140 NC_009850.1 1141351 1142838 D Pfam match to PF00005 ABC_tran, score 82.3, E-value 1E-016; ABC transporter, ATP-binding protein 1141351..1142838 Arcobacter butzleri RM4018 5623220 YP_001490070.1 CDS Abu_1141 NC_009850.1 1142902 1143348 D Pfam match to PF06445 AraC_E_bind, score 57.7, E-value 3.5E-014; hypothetical protein 1142902..1143348 Arcobacter butzleri RM4018 5623912 YP_001490071.1 CDS torC NC_009850.1 1143508 1144101 D cytochrome c-type protein TorC 1143508..1144101 Arcobacter butzleri RM4018 5623913 YP_001490072.1 CDS bisC NC_009850.1 1144098 1146581 D Pfam matches to PF00384 Molybdopterin, score 440.3, E-value 2.3E-129, and to PF01568 Molydop_binding, score 119.2, E-value 1.1E-032; biotin sulfoxide reductase 1144098..1146581 Arcobacter butzleri RM4018 5623914 YP_001490073.1 CDS Abu_1144 NC_009850.1 1146607 1147428 R Pfam match to PF00561 Abhydrolase_1, score 53.4, E-value 8.5E-015; alpha/beta hydrolase fold protein complement(1146607..1147428) Arcobacter butzleri RM4018 5623915 YP_001490074.1 CDS Abu_1145 NC_009850.1 1147505 1148098 D Pfam match to PF00440 TetR_N, score 31.1, E-value 3E-008; TetR family transcriptional regulator 1147505..1148098 Arcobacter butzleri RM4018 5623916 YP_001490075.1 CDS mutS2 NC_009850.1 1148145 1150346 D MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1148145..1150346 Arcobacter butzleri RM4018 5623917 YP_001490076.1 CDS Abu_1147 NC_009850.1 1150336 1151673 R Pfam matches to PF01595 DUF21, score 278.3, E-value 1.3E-080, and to PF00571 CBS, score 107.3, E-value 4.2E-029, and to PF03471 CorC_HlyC, score 66.9, E-value 3.6E-018; efflux protein complement(1150336..1151673) Arcobacter butzleri RM4018 5623918 YP_001490077.1 CDS Abu_1148 NC_009850.1 1151764 1152318 R hypothetical protein complement(1151764..1152318) Arcobacter butzleri RM4018 5623919 YP_001490078.1 CDS Abu_1149 NC_009850.1 1152405 1155164 R Pfam match to PF05359 DUF748, score 53.5, E-value 6.5E-013; hypothetical protein complement(1152405..1155164) Arcobacter butzleri RM4018 5623920 YP_001490079.1 CDS dapE NC_009850.1 1155252 1156352 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1155252..1156352 Arcobacter butzleri RM4018 5623921 YP_001490080.1 CDS amtB NC_009850.1 1156461 1157780 D Pfam match to PF00909 Ammonium_transp, score 471.1, E-value 1.3E-138; ammonium transporter 1156461..1157780 Arcobacter butzleri RM4018 5623922 YP_001490081.1 CDS glnB2 NC_009850.1 1157800 1158138 D Pfam match to PF00543 P-II, score 211.9, E-value 4.3E-069; nitrogen regulatory protein PII 1157800..1158138 Arcobacter butzleri RM4018 5623923 YP_001490082.1 CDS pssA NC_009850.1 1158301 1158858 D Pfam match to PF01066 CDP-OH_P_transf, score 44.3, E-value 3.8E-010; CDP-diacylglycerol--serine O-phosphatidyltransferase 1158301..1158858 Arcobacter butzleri RM4018 5623587 YP_001490083.1 CDS Abu_1154 NC_009850.1 1158866 1159786 D Pfam match to PF02541 Ppx-GppA, score 29.8, E-value 1.7E-008; Ppx/GppA phosphatase 1158866..1159786 Arcobacter butzleri RM4018 5623588 YP_001490084.1 CDS Abu_1155 NC_009850.1 1159783 1160571 R hypothetical protein complement(1159783..1160571) Arcobacter butzleri RM4018 5624683 YP_001490085.1 CDS ilvI NC_009850.1 1160732 1162429 D catalyzes the formation of 2-acetolactate from pyruvate, leucine resistant; also known as acetolactate synthase 3 large subunit; acetolactate synthase 3 catalytic subunit 1160732..1162429 Arcobacter butzleri RM4018 5624684 YP_001490086.1 CDS ilvH NC_009850.1 1162429 1162926 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1162429..1162926 Arcobacter butzleri RM4018 5624685 YP_001490087.1 CDS lpxD NC_009850.1 1162945 1163892 D Pfam match to PF04613 LpxD, score 85.1, E-value 2E-022; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1162945..1163892 Arcobacter butzleri RM4018 5624686 YP_001490088.1 CDS Abu_1159 NC_009850.1 1164050 1166110 D Pfam match to PF01580 FtsK_SpoIIIE, score 282.8, E-value 6.1E-082. Possible pseudogene/truncated protein. G:A transition (Met:Ile) at bp 1163905 results in a potential start codon shift to bp 1264050. Possible RBS present at bp 1163891-1163895.; cell division protein FtsK 1164050..1166110 Arcobacter butzleri RM4018 5624687 YP_001490089.1 CDS Abu_1160 NC_009850.1 1166175 1166861 D Pfam matches to PF00072 Response_reg, score 112, E-value 7.1E-034, and to PF00486 Trans_reg_C, score 56.1, E-value 1E-013; two-component response regulator 1166175..1166861 Arcobacter butzleri RM4018 5623589 YP_001490090.1 CDS Abu_1161 NC_009850.1 1166977 1168173 D Pfam matches to PF02518 HATPase_c, score 22.7, E-value 5.5E-006, and to PF00672 HAMP, score 29.1, E-value 1.4E-005; two-component sensor histidine kinase 1166977..1168173 Arcobacter butzleri RM4018 5625182 YP_001490091.1 CDS Abu_1162 NC_009850.1 1168235 1169101 D hypothetical protein 1168235..1169101 Arcobacter butzleri RM4018 5625183 YP_001490092.1 CDS Abu_1163 NC_009850.1 1169171 1171018 D Pfam matches to PF07568 HisKA_2, score 109.8, E-value 7E-030, and to PF07695 7TMR-DISM_7TM, score 78.4, E-value 2.1E-020, and to PF02518 HATPase_c, score 44.8, E-value 2.7E-010; two-component sensor histidine kinase 1169171..1171018 Arcobacter butzleri RM4018 5625184 YP_001490093.1 CDS Abu_1164 NC_009850.1 1171011 1171700 D Pfam matches to PF00072 Response_reg, score 74.3, E-value 2.7E-022, and to PF00486 Trans_reg_C, score 63.7, E-value 5.6E-016; two-component response regulator 1171011..1171700 Arcobacter butzleri RM4018 5625185 YP_001490094.1 CDS Abu_1165 NC_009850.1 1171772 1172533 D hypothetical protein 1171772..1172533 Arcobacter butzleri RM4018 5625186 YP_001490095.1 CDS Abu_1166 NC_009850.1 1172599 1173264 D Pfam matches to PF00072 Response_reg, score 70.9, E-value 2.9E-021, and to PF00486 Trans_reg_C, score 32.4, E-value 1.4E-006; two-component response regulator 1172599..1173264 Arcobacter butzleri RM4018 5625187 YP_001490096.1 CDS Abu_1167 NC_009850.1 1173293 1173913 D hypothetical protein 1173293..1173913 Arcobacter butzleri RM4018 5625188 YP_001490097.1 CDS Abu_1168 NC_009850.1 1174011 1174712 D hypothetical protein 1174011..1174712 Arcobacter butzleri RM4018 5625189 YP_001490098.1 CDS Abu_1169 NC_009850.1 1174743 1175354 D hypothetical protein 1174743..1175354 Arcobacter butzleri RM4018 5625190 YP_001490099.1 CDS Abu_1170 NC_009850.1 1175437 1175874 R Pfam match to PF02810 SEC-C, score 29.3, E-value 1.2E-005; hypothetical protein complement(1175437..1175874) Arcobacter butzleri RM4018 5625191 YP_001490100.1 CDS Abu_1171 NC_009850.1 1176074 1176364 D hypothetical protein 1176074..1176364 Arcobacter butzleri RM4018 5625192 YP_001490101.1 CDS Abu_1172 NC_009850.1 1176351 1179053 D DNA helicase 1176351..1179053 Arcobacter butzleri RM4018 5625193 YP_001490102.1 CDS Abu_1173 NC_009850.1 1179144 1179242 D hypothetical protein 1179144..1179242 Arcobacter butzleri RM4018 5624764 YP_001490103.1 CDS Abu_1174 NC_009850.1 1179437 1179979 D Pfam match to PF02482 Ribosomal_S30AE, score 43.8, E-value 5.4E-010; hypothetical protein 1179437..1179979 Arcobacter butzleri RM4018 5624765 YP_001490104.1 CDS engA NC_009850.1 1180064 1181521 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1180064..1181521 Arcobacter butzleri RM4018 5624766 YP_001490105.1 CDS Abu_1176 NC_009850.1 1181548 1183122 D Pfam matches to PF00916 Sulfate_transp, score 277, E-value 3.3E-080, and to PF01740 STAS, score 41, E-value 1.9E-011; sulfate permease 1181548..1183122 Arcobacter butzleri RM4018 5624767 YP_001490106.1 CDS hemD NC_009850.1 1183119 1183748 D Pfam match to PF02602 HEM4, score 50.6, E-value 4.8E-012; uroporphyrinogen III cosynthase HemD 1183119..1183748 Arcobacter butzleri RM4018 5624768 YP_001490107.1 CDS Abu_1178 NC_009850.1 1183807 1184019 D hypothetical protein 1183807..1184019 Arcobacter butzleri RM4018 5624769 YP_001490108.1 CDS purD NC_009850.1 1183988 1185250 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1183988..1185250 Arcobacter butzleri RM4018 5624770 YP_001490109.1 CDS Abu_1180 NC_009850.1 1185257 1185694 D Pfam match to PF06271 RDD, score 83.1, E-value 7.7E-022; hypothetical protein 1185257..1185694 Arcobacter butzleri RM4018 5624771 YP_001490110.1 CDS Abu_1181 NC_009850.1 1185687 1187864 D hypothetical protein 1185687..1187864 Arcobacter butzleri RM4018 5624772 YP_001490111.1 CDS Abu_1182 NC_009850.1 1187864 1188517 D hypothetical protein 1187864..1188517 Arcobacter butzleri RM4018 5624773 YP_001490112.1 CDS pnp NC_009850.1 1188524 1190701 D Pfam matches to PF01138 RNase_PH, score 138.9, E-value 1.2E-038, and to PF03725 RNase_PH_C, score 75.3, E-value 1.8E-019, and to PF00575 S1, score 55.5, E-value 1.6E-013, and to PF00013 KH_1, score 48.3, E-value 2.4E-011, and to PF03725 RNase_PH_C, score 30.9, E-value 4E-006, and to PF03726 PNPase, score 30.3, E-value 6.4E-006; polynucleotide phosphorylase/polyadenylase 1188524..1190701 Arcobacter butzleri RM4018 5624774 YP_001490113.1 CDS cheY1 NC_009850.1 1190831 1191199 D Pfam match to PF00072 Response_reg, score 126.3, E-value 3.1E-038; chemotaxis protein CheY 1190831..1191199 Arcobacter butzleri RM4018 5624775 YP_001490114.1 CDS cheA NC_009850.1 1191212 1193269 D Pfam matches to PF02518 HATPase_c, score 98.9, E-value 1.4E-026, and to PF01584 CheW, score 76.8, E-value 6.2E-020, and to PF02895 H-kinase_dim, score 54.3, E-value 3.6E-013, and to PF01627 Hpt, score 41.3, E-value 3E-009; chemotaxis protein CheA 1191212..1193269 Arcobacter butzleri RM4018 5624776 YP_001490115.1 CDS cheR NC_009850.1 1193275 1194117 D Pfam match to PF01739 CheR, score 176.7, E-value 5.2E-050; chemotaxis protein methyltransferase 1193275..1194117 Arcobacter butzleri RM4018 5624344 YP_001490116.1 CDS cheD NC_009850.1 1194114 1194803 D Pfam match to PF03975 CheD, score 64.9, E-value 2.4E-016; chemotaxis protein CheD 1194114..1194803 Arcobacter butzleri RM4018 5624345 YP_001490117.1 CDS cheB NC_009850.1 1194836 1195915 D Pfam matches to PF01339 CheB_methylest, score 277.4, E-value 2.6E-080, and to PF00072 Response_reg, score 96.5, E-value 4E-029; protein-glutamate methylesterase CheB 1194836..1195915 Arcobacter butzleri RM4018 5624346 YP_001490118.1 CDS Abu_1189 NC_009850.1 1195916 1196509 D hypothetical protein 1195916..1196509 Arcobacter butzleri RM4018 5624347 YP_001490119.1 CDS fsr NC_009850.1 1196519 1197673 D Pfam match to PF07690 MFS_1, score 159.2, E-value 9.5E-045; fosmidomycin resistance protein 1196519..1197673 Arcobacter butzleri RM4018 5624348 YP_001490120.1 CDS xerD NC_009850.1 1197782 1198834 D Pfam match to PF00589 Phage_integrase, score 112.2, E-value 2.5E-031; integrase/recombinase XerD 1197782..1198834 Arcobacter butzleri RM4018 5624349 YP_001490121.1 CDS Abu_1192 NC_009850.1 1198836 1199180 D Pfam match to PF01903 CbiX, score 93.5, E-value 2.7E-026; hypothetical protein 1198836..1199180 Arcobacter butzleri RM4018 5624350 YP_001490122.1 CDS Abu_1193 NC_009850.1 1199186 1199464 R hypothetical protein complement(1199186..1199464) Arcobacter butzleri RM4018 5624351 YP_001490123.1 CDS Abu_1194 NC_009850.1 1199483 1199959 R hypothetical protein complement(1199483..1199959) Arcobacter butzleri RM4018 5624352 YP_001490124.1 CDS prlC NC_009850.1 1200012 1201982 R Pfam match to PF01432 Peptidase_M3, score 467.9, E-value 1.1E-137; oligopeptidase A complement(1200012..1201982) Arcobacter butzleri RM4018 5624353 YP_001490125.1 CDS hemK NC_009850.1 1201985 1202818 R Pfam match to PF08241 Methyltransf_11, score 32.8, E-value 3.3E-008; modification methylase complement(1201985..1202818) Arcobacter butzleri RM4018 5624354 YP_001490126.1 CDS hemN1 NC_009850.1 1202861 1203934 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1202861..1203934) Arcobacter butzleri RM4018 5624355 YP_001490127.1 CDS nudH NC_009850.1 1203990 1204487 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 1203990..1204487 Arcobacter butzleri RM4018 5624611 YP_001490128.1 CDS lysC NC_009850.1 1204505 1205716 D Pfam matches to PF00696 AA_kinase, score 224.8, E-value 1.7E-064, and to PF01842 ACT, score 40.7, E-value 1.1E-010; aspartokinase 1204505..1205716 Arcobacter butzleri RM4018 5624612 YP_001490129.1 CDS Abu_1200 NC_009850.1 1205719 1206270 D hypothetical protein 1205719..1206270 Arcobacter butzleri RM4018 5624613 YP_001490130.1 CDS holB NC_009850.1 1206267 1206902 D DNA polymerase III delta prime subunit HolB 1206267..1206902 Arcobacter butzleri RM4018 5624614 YP_001490131.1 CDS folP NC_009850.1 1206914 1208053 D Pfam match to PF00809 Pterin_bind, score 285.7, E-value 8.1E-083; dihydropteroate synthase 1206914..1208053 Arcobacter butzleri RM4018 5624615 YP_001490132.1 CDS Abu_1203 NC_009850.1 1208112 1208639 R hypothetical protein complement(1208112..1208639) Arcobacter butzleri RM4018 5624616 YP_001490133.1 CDS cfa NC_009850.1 1208636 1209862 R Pfam match to PF02353 CMAS, score 359.4, E-value 5.4E-105; cyclopropane-fatty-acyl-phospholipid synthase complement(1208636..1209862) Arcobacter butzleri RM4018 5624617 YP_001490134.1 CDS Abu_1205 NC_009850.1 1209865 1210617 R Pfam match to PF07103 DUF1365, score 52.3, E-value 4.7E-015; hypothetical protein complement(1209865..1210617) Arcobacter butzleri RM4018 5624618 YP_001490135.1 CDS Abu_1206 NC_009850.1 1210619 1211857 R Pfam match to PF01593 Amino_oxidase, score 32.5, E-value 3.5E-009; hypothetical protein complement(1210619..1211857) Arcobacter butzleri RM4018 5624619 YP_001490136.1 CDS Abu_1207 NC_009850.1 1211854 1212342 R Pfam match to PF08212 Lipocalin_2, score 91.4, E-value 1E-025; lipoprotein complement(1211854..1212342) Arcobacter butzleri RM4018 5624620 YP_001490137.1 CDS Abu_1208 NC_009850.1 1212400 1213662 R Pfam match to PF07690 MFS_1, score 30.9, E-value 1.6E-008; sugar transporter complement(1212400..1213662) Arcobacter butzleri RM4018 5624621 YP_001490138.1 CDS Abu_1209 NC_009850.1 1213703 1214461 R Pfam match to PF00106 adh_short, score -4, E-value 6.8E-006; short chain dehydrogenase/reductase family oxidoreductase complement(1213703..1214461) Arcobacter butzleri RM4018 5624622 YP_001490139.1 CDS tyrA NC_009850.1 1214561 1215397 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(1214561..1215397) Arcobacter butzleri RM4018 5623281 YP_001490140.1 CDS Abu_1211 NC_009850.1 1215469 1217775 D Pfam matches to PF01103 Bac_surface_Ag, score 132.3, E-value 1.2E-036, and to PF07244 Surf_Ag_VNR, score 60.8, E-value 4E-015; outer membrane surface antigen protein 1215469..1217775 Arcobacter butzleri RM4018 5623282 YP_001490141.1 CDS Abu_1212 NC_009850.1 1217775 1218848 D Pfam match to PF04055 Radical_SAM, score 77.3, E-value 4.3E-020; hypothetical protein 1217775..1218848 Arcobacter butzleri RM4018 5623283 YP_001490142.1 CDS Abu_1213 NC_009850.1 1218852 1220144 D Pfam match to PF05193 Peptidase_M16_C, score 101.5, E-value 3.1E-028; M16 family peptidase 1218852..1220144 Arcobacter butzleri RM4018 5623284 YP_001490143.1 CDS gltX2 NC_009850.1 1220147 1221448 D charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase 1220147..1221448 Arcobacter butzleri RM4018 5623285 YP_001490144.1 CDS Abu_1215 NC_009850.1 1221445 1221717 D Pfam match to PF02325 YGGT, score 66.9, E-value 5.8E-017; hypothetical protein 1221445..1221717 Arcobacter butzleri RM4018 5623286 YP_001490145.1 CDS slt NC_009850.1 1221727 1223385 D Pfam match to PF01464 SLT, score 51.5, E-value 2.6E-012; soluble lytic murein transglycosylase (slt) 1221727..1223385 Arcobacter butzleri RM4018 5623287 YP_001490146.1 CDS Abu_1217 NC_009850.1 1223354 1223851 R hypothetical protein complement(1223354..1223851) Arcobacter butzleri RM4018 5623288 YP_001490147.1 CDS mobB NC_009850.1 1223949 1224446 D Pfam match to PF03205 MobB, score 85.6, E-value 1.4E-022; molybdopterin-guanine dinucleotide biosynthesis protein 1223949..1224446 Arcobacter butzleri RM4018 5623289 YP_001490148.1 CDS fbp NC_009850.1 1224450 1225292 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1224450..1225292 Arcobacter butzleri RM4018 5623290 YP_001490149.1 CDS Abu_1220 NC_009850.1 1225285 1225491 D hypothetical protein 1225285..1225491 Arcobacter butzleri RM4018 5623291 YP_001490150.1 CDS metS NC_009850.1 1225506 1227458 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1225506..1227458 Arcobacter butzleri RM4018 5623292 YP_001490151.1 CDS Abu_1222 NC_009850.1 1227458 1228456 D hypothetical protein 1227458..1228456 Arcobacter butzleri RM4018 5623246 YP_001490152.1 CDS Abu_1223 NC_009850.1 1228459 1229115 R Pfam match to PF00717 Peptidase_S24, score 54.3, E-value 3.8E-013; S24 family peptidase complement(1228459..1229115) Arcobacter butzleri RM4018 5623247 YP_001490153.1 CDS Abu_1224 NC_009850.1 1229225 1229320 D hypothetical protein 1229225..1229320 Arcobacter butzleri RM4018 5623248 YP_001490154.1 CDS Abu_1225 NC_009850.1 1229441 1229716 D hypothetical protein 1229441..1229716 Arcobacter butzleri RM4018 5623249 YP_001490155.1 CDS pycB2 NC_009850.1 1229723 1231555 D Pfam matches to PF00364 Biotin_lipoyl, score 83.9, E-value 4.4E-022, and to PF00682 HMGL-like, score -49.1, E-value 6.8E-005; pyruvate/oxaloacetate carboxyltransferase 1229723..1231555 Arcobacter butzleri RM4018 5623250 YP_001490156.1 CDS pckA NC_009850.1 1231629 1233206 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1231629..1233206 Arcobacter butzleri RM4018 5623251 YP_001490157.1 CDS ribAB NC_009850.1 1233243 1234274 R bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(1233243..1234274) Arcobacter butzleri RM4018 5623252 YP_001490158.1 CDS glyS NC_009850.1 1234734 1236749 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(1234734..1236749) Arcobacter butzleri RM4018 5623256 YP_001490159.1 CDS Abu_1233 NC_009850.1 1236742 1236900 R hypothetical protein complement(1236742..1236900) Arcobacter butzleri RM4018 5623257 YP_001490160.1 CDS Abu_1234 NC_009850.1 1236929 1237312 R hypothetical protein complement(1236929..1237312) Arcobacter butzleri RM4018 5624189 YP_001490161.1 CDS Abu_1235 NC_009850.1 1237319 1237531 R hypothetical protein complement(1237319..1237531) Arcobacter butzleri RM4018 5624190 YP_001490162.1 CDS gidB NC_009850.1 1237528 1238112 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(1237528..1238112) Arcobacter butzleri RM4018 5624191 YP_001490163.1 CDS ribA NC_009850.1 1238112 1238687 R Pfam match to PF00925 GTP_cyclohydro2, score 284.8, E-value 1.5E-082; GTP cyclohydrolase II complement(1238112..1238687) Arcobacter butzleri RM4018 5624192 YP_001490164.1 CDS hemB NC_009850.1 1238749 1239723 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1238749..1239723 Arcobacter butzleri RM4018 5624193 YP_001490165.1 CDS Abu_1239 NC_009850.1 1239732 1240811 D Pfam matches to PF02518 HATPase_c, score 82.2, E-value 1.4E-021, and to PF08447 PAS_3, score 57.3, E-value 3.5E-015; two-component sensor histidine kinase 1239732..1240811 Arcobacter butzleri RM4018 5624194 YP_001490166.1 CDS Abu_1240 NC_009850.1 1240808 1241470 D Pfam matches to PF00072 Response_reg, score 118.4, E-value 8.3E-036, and to PF00486 Trans_reg_C, score 31.3, E-value 3.2E-006; two-component response regulator 1240808..1241470 Arcobacter butzleri RM4018 5624195 YP_001490167.1 CDS Abu_1241 NC_009850.1 1241447 1242151 R Pfam match to PF04055 Radical_SAM, score 69.9, E-value 7.4E-018; radical SAM domain-containing protein complement(1241447..1242151) Arcobacter butzleri RM4018 5624196 YP_001490168.1 CDS Abu_1242 NC_009850.1 1242102 1242266 R hypothetical protein complement(1242102..1242266) Arcobacter butzleri RM4018 5624197 YP_001490169.1 CDS nrdD NC_009850.1 1242244 1244358 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(1242244..1244358) Arcobacter butzleri RM4018 5624198 YP_001490170.1 CDS argF NC_009850.1 1244572 1245501 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1244572..1245501 Arcobacter butzleri RM4018 5624199 YP_001490171.1 CDS hemN2 NC_009850.1 1245502 1246869 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1245502..1246869 Arcobacter butzleri RM4018 5624200 YP_001490172.1 CDS Abu_1246 NC_009850.1 1246915 1247385 R hypothetical protein complement(1246915..1247385) Arcobacter butzleri RM4018 5624402 YP_001490173.1 CDS Abu_1247 NC_009850.1 1247386 1247598 R hypothetical protein complement(1247386..1247598) Arcobacter butzleri RM4018 5624403 YP_001490174.1 CDS lpxK NC_009850.1 1247607 1248551 R transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(1247607..1248551) Arcobacter butzleri RM4018 5624404 YP_001490175.1 CDS Abu_1249 NC_009850.1 1248558 1249694 R Pfam match to PF01041 DegT_DnrJ_EryC1, score 245.6, E-value 9.3E-071; DegT/DnrJ/EryC1/StrS aminotransferase complement(1248558..1249694) Arcobacter butzleri RM4018 5624405 YP_001490176.1 CDS nadE NC_009850.1 1249691 1250455 R Pfam match to PF02540 NAD_synthase, score 364, E-value 2.2E-106; NH(3)-dependent NAD+ synthetase complement(1249691..1250455) Arcobacter butzleri RM4018 5624406 YP_001490177.1 CDS Abu_1251 NC_009850.1 1250483 1250695 R hypothetical protein complement(1250483..1250695) Arcobacter butzleri RM4018 5624407 YP_001490178.1 CDS Abu_1252 NC_009850.1 1250703 1250927 R Pfam match to PF04324 Fer2_BFD, score 34.9, E-value 2.6E-007; hypothetical protein complement(1250703..1250927) Arcobacter butzleri RM4018 5624408 YP_001490179.1 CDS Abu_1253 NC_009850.1 1250928 1251683 R Pfam match to PF00226 DnaJ, score 51.8, E-value 9E-015; DnaJ domain-containing protein complement(1250928..1251683) Arcobacter butzleri RM4018 5624409 YP_001490180.1 CDS Abu_1254 NC_009850.1 1252683 1252997 D hypothetical protein 1252683..1252997 Arcobacter butzleri RM4018 5624410 YP_001490181.1 CDS Abu_1255 NC_009850.1 1253269 1253625 D Pfam match to PF02416 MttA_Hcf106, score 23.2, E-value 1.5E-005; hypothetical protein 1253269..1253625 Arcobacter butzleri RM4018 5624411 YP_001490182.1 CDS tatC NC_009850.1 1253625 1254365 D Pfam match to PF00902 TatC, score 287, E-value 3.2E-083; Sec-independent protein secretion pathway component TatC 1253625..1254365 Arcobacter butzleri RM4018 5624412 YP_001490183.1 CDS queA NC_009850.1 1254369 1255391 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1254369..1255391 Arcobacter butzleri RM4018 5624413 YP_001490184.1 CDS dnaQ4 NC_009850.1 1255402 1256145 D Pfam match to PF00929 Exonuc_X-T, score 51.6, E-value 2.4E-012; DNA polymerase III, epsilon subunit 1255402..1256145 Arcobacter butzleri RM4018 5624463 YP_001490185.1 CDS Abu_1259 NC_009850.1 1256146 1256901 D hypothetical protein 1256146..1256901 Arcobacter butzleri RM4018 5624464 YP_001490186.1 CDS comE NC_009850.1 1256890 1258125 R Pfam match to PF03772 Competence, score 112.5, E-value 1.1E-030; competence locus E complement(1256890..1258125) Arcobacter butzleri RM4018 5624465 YP_001490187.1 CDS Abu_1261 NC_009850.1 1258157 1258633 D hypothetical protein 1258157..1258633 Arcobacter butzleri RM4018 5624466 YP_001490188.1 CDS Abu_1262 NC_009850.1 1258642 1260654 R Pfam match to PF08241 Methyltransf_11, score 32.8, E-value 1.1E-006; hypothetical protein complement(1258642..1260654) Arcobacter butzleri RM4018 5624467 YP_001490189.1 CDS Abu_1263 NC_009850.1 1260665 1262899 R hypothetical protein complement(1260665..1262899) Arcobacter butzleri RM4018 5624468 YP_001490190.1 CDS Abu_1264 NC_009850.1 1262886 1263461 R hypothetical protein complement(1262886..1263461) Arcobacter butzleri RM4018 5624469 YP_001490191.1 CDS Abu_1265 NC_009850.1 1263533 1264525 D hypothetical protein 1263533..1264525 Arcobacter butzleri RM4018 5624470 YP_001490192.1 CDS glpC NC_009850.1 1264624 1265922 D Pfam match to PF02754 CCG, score 53.3, E-value 7.2E-013; anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) 1264624..1265922 Arcobacter butzleri RM4018 5624471 YP_001490193.1 CDS lgt NC_009850.1 1265927 1266745 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1265927..1266745 Arcobacter butzleri RM4018 5624472 YP_001490194.1 CDS Abu_1268 NC_009850.1 1266746 1266943 R hypothetical protein complement(1266746..1266943) Arcobacter butzleri RM4018 5624473 YP_001490195.1 CDS Abu_1269 NC_009850.1 1266977 1267669 R Pfam match to PF00072 Response_reg, score 25.3, E-value 2.7E-007; two-component response regulator complement(1266977..1267669) Arcobacter butzleri RM4018 5624474 YP_001490196.1 CDS polA NC_009850.1 1267741 1270431 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(1267741..1270431) Arcobacter butzleri RM4018 5625031 YP_001490197.1 CDS Abu_1271 NC_009850.1 1270509 1271042 D acetyltransferase 1270509..1271042 Arcobacter butzleri RM4018 5625032 YP_001490198.1 CDS kdsB NC_009850.1 1271065 1271796 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1271065..1271796 Arcobacter butzleri RM4018 5625033 YP_001490199.1 CDS Abu_1273 NC_009850.1 1271800 1273734 D Pfam matches to PF00563 EAL, score 237.7, E-value 2.3E-068, and to PF00990 GGDEF, score 45.7, E-value 7.3E-013; EAL/GGDEF domain-containing protein 1271800..1273734 Arcobacter butzleri RM4018 5625034 YP_001490200.1 CDS Abu_1274 NC_009850.1 1273746 1274468 R Pfam match to PF00005 ABC_tran, score 231.2, E-value 2.1E-066; ABC transporter, ATP-binding protein complement(1273746..1274468) Arcobacter butzleri RM4018 5625035 YP_001490201.1 CDS Abu_1275 NC_009850.1 1274461 1274877 R Pfam match to PF02367 UPF0079, score 82.7, E-value 1E-021; hypothetical protein complement(1274461..1274877) Arcobacter butzleri RM4018 5625036 YP_001490202.1 CDS trpD NC_009850.1 1274888 1275871 R Pfam match to PF00591 Glycos_transf_3, score 362.7, E-value 5.5E-106; anthranilate phosphoribosyltransferase complement(1274888..1275871) Arcobacter butzleri RM4018 5625037 YP_001490203.1 CDS Abu_1277 NC_009850.1 1276083 1276961 D hypothetical protein 1276083..1276961 Arcobacter butzleri RM4018 5625038 YP_001490204.1 CDS Abu_1278 NC_009850.1 1276971 1277219 R Pfam match to PF01479 S4, score 36.1, E-value 1.1E-007; S4 domain-containing protein complement(1276971..1277219) Arcobacter butzleri RM4018 5625039 YP_001490205.1 CDS argG NC_009850.1 1277301 1278542 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1277301..1278542 Arcobacter butzleri RM4018 5625040 YP_001490206.1 CDS dltA NC_009850.1 1278586 1280022 R Pfam match to PF00501 AMP-binding, score 298.6, E-value 1.1E-086; D-alanine activating enzyme complement(1278586..1280022) Arcobacter butzleri RM4018 5625041 YP_001490207.1 CDS dltB NC_009850.1 1280019 1281155 R Pfam match to PF03062 MBOAT, score 119.9, E-value 6.4E-033; D-alanyl transfer protein complement(1280019..1281155) Arcobacter butzleri RM4018 5625042 YP_001490208.1 CDS Abu_1282 NC_009850.1 1281155 1281295 R hypothetical protein complement(1281155..1281295) Arcobacter butzleri RM4018 5623234 YP_001490209.1 CDS dltD NC_009850.1 1281306 1282433 R poly D-alanine transfer protein complement(1281306..1282433) Arcobacter butzleri RM4018 5623235 YP_001490210.1 CDS dltC NC_009850.1 1282433 1282660 R D-alanyl carrier protein complement(1282433..1282660) Arcobacter butzleri RM4018 5623236 YP_001490211.1 CDS Abu_1285 NC_009850.1 1282806 1283306 D hypothetical protein 1282806..1283306 Arcobacter butzleri RM4018 5623237 YP_001490212.1 CDS Abu_1286 NC_009850.1 1283686 1285182 D Pfam matches to PF00916 Sulfate_transp, score 325.2, E-value 1.1E-094, and to PF01740 STAS, score 38, E-value 1.5E-010; sulfate permease 1283686..1285182 Arcobacter butzleri RM4018 5623238 YP_001490213.1 CDS uspA NC_009850.1 1285185 1286024 D Pfam match to PF00582 Usp, score 67.4, E-value 4.2E-017; universal stress protein 1285185..1286024 Arcobacter butzleri RM4018 5623239 YP_001490214.1 CDS ktrA NC_009850.1 1286688 1287338 R Pfam match to PF02254 TrkA_N, score 117.3, E-value 4.1E-032; TRK system potassium uptake protein TrkA complement(1286688..1287338) Arcobacter butzleri RM4018 5623240 YP_001490215.1 CDS ktrB NC_009850.1 1287335 1288663 R Pfam match to PF02386 TrkH, score 287.3, E-value 2.7E-083; TRK system potassium uptake protein TrkB complement(1287335..1288663) Arcobacter butzleri RM4018 5623241 YP_001490216.1 CDS kdpE NC_009850.1 1288670 1289356 R Pfam matches to PF00072 Response_reg, score 88, E-value 1.7E-026, and to PF00486 Trans_reg_C, score 68.5, E-value 1.9E-017; two component system transcriptional regulatory protein complement(1288670..1289356) Arcobacter butzleri RM4018 5623242 YP_001490217.1 CDS kdpD NC_009850.1 1289353 1290381 R Pfam matches to PF02518 HATPase_c, score 99, E-value 1.3E-026, and to PF00512 HisKA, score 52.2, E-value 1.6E-012; two-component regulatory protein sensor kinase KdpD complement(1289353..1290381) Arcobacter butzleri RM4018 5623243 YP_001490218.1 CDS dut NC_009850.1 1290565 1291491 R deoxyuridinetriphosphatase complement(1290565..1291491) Arcobacter butzleri RM4018 5623244 YP_001490219.1 CDS recR NC_009850.1 1291683 1292255 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(1291683..1292255) Arcobacter butzleri RM4018 5623245 YP_001490220.1 CDS dnaJ NC_009850.1 1292355 1293473 D Pfam matches to PF01556 DnaJ_C, score 216.3, E-value 6.4E-062, and to PF00226 DnaJ, score 135.2, E-value 1.5E-039, and to PF00684 DnaJ_CXXCXGXG, score 89.8, E-value 7.8E-024; co-chaperone and heat shock protein DnaJ 1292355..1293473 Arcobacter butzleri RM4018 5623975 YP_001490221.1 CDS trpB2 NC_009850.1 1293505 1294722 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1293505..1294722 Arcobacter butzleri RM4018 5623976 YP_001490222.1 CDS Abu_1296 NC_009850.1 1294733 1295323 D hypothetical protein 1294733..1295323 Arcobacter butzleri RM4018 5623977 YP_001490223.1 CDS Abu_1297 NC_009850.1 1295324 1295983 R hypothetical protein complement(1295324..1295983) Arcobacter butzleri RM4018 5623978 YP_001490224.1 CDS Abu_1298 NC_009850.1 1295984 1296802 R Pfam match to PF04305 DUF455, score 215.6, E-value 1.1E-061; hypothetical protein complement(1295984..1296802) Arcobacter butzleri RM4018 5623979 YP_001490225.1 CDS Abu_1299 NC_009850.1 1296857 1297450 D Pfam match to PF00753 Lactamase_B, score 96.5, E-value 7.1E-026; beta-lactamase-like protein 1296857..1297450 Arcobacter butzleri RM4018 5623980 YP_001490226.1 CDS Abu_1300 NC_009850.1 1297450 1298352 D Pfam match to PF00990 GGDEF, score 100.8, E-value 9.7E-029; GGDEF domain-containing protein 1297450..1298352 Arcobacter butzleri RM4018 5623981 YP_001490227.1 CDS Abu_1301 NC_009850.1 1298360 1299328 D Pfam match to PF00990 GGDEF, score 79.7, E-value 1.2E-022; GGDEF domain-containing protein 1298360..1299328 Arcobacter butzleri RM4018 5623982 YP_001490228.1 CDS Abu_1302 NC_009850.1 1299331 1300245 R Pfam match to PF08003 Methyltransf_9, score 320.1, E-value 3.6E-093; hypothetical protein complement(1299331..1300245) Arcobacter butzleri RM4018 5623983 YP_001490229.1 CDS Abu_1303 NC_009850.1 1300314 1300811 D hypothetical protein 1300314..1300811 Arcobacter butzleri RM4018 5623984 YP_001490230.1 CDS Abu_1304 NC_009850.1 1300915 1303662 D Pfam match to PF01578 Cytochrom_C_asm, score 147, E-value 4.6E-041; cytochrome c biogenesis protein 1300915..1303662 Arcobacter butzleri RM4018 5623985 YP_001490231.1 CDS pepD NC_009850.1 1303701 1304987 D Pfam match to PF01546, Peptidase_M20, score 57.1, E-value 4E-009; aminoacyl-histidine dipeptidase PepD 1303701..1304987 Arcobacter butzleri RM4018 5623986 YP_001490232.1 CDS Abu_1306 NC_009850.1 1304989 1305285 R hypothetical protein complement(1304989..1305285) Arcobacter butzleri RM4018 5623293 YP_001490233.1 CDS Abu_1307 NC_009850.1 1305348 1307831 R Pfam matches to PF00015 MCPsignal, score 148.4, E-value 1.8E-041, and to PF08269 Cache_2, score 58, E-value 2.9E-014; methyl-accepting chemotaxis protein complement(1305348..1307831) Arcobacter butzleri RM4018 5623294 YP_001490234.1 CDS Abu_1308 NC_009850.1 1308062 1308316 D hypothetical protein 1308062..1308316 Arcobacter butzleri RM4018 5623295 YP_001490235.1 CDS lolA NC_009850.1 1308303 1308833 R Pfam match to PF03548 LolA, score 93.8, E-value 4.8E-025; outer membrane lipoprotein carrier protein LolA complement(1308303..1308833) Arcobacter butzleri RM4018 5623296 YP_001490236.1 CDS secA NC_009850.1 1308890 1311508 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 1308890..1311508 Arcobacter butzleri RM4018 5623297 YP_001490237.1 CDS Abu_1311 NC_009850.1 1311510 1312715 D Pfam match to PF02687 FtsX, score 148.1, E-value 2.2E-041; hypothetical protein 1311510..1312715 Arcobacter butzleri RM4018 5623298 YP_001490238.1 CDS Abu_1312 NC_009850.1 1312731 1315649 R hypothetical protein complement(1312731..1315649) Arcobacter butzleri RM4018 5623299 YP_001490239.1 CDS Abu_1313 NC_009850.1 1315570 1316691 D Pfam match to PF02618 ADC_lyase, score 202.8, E-value 7.3E-058; 4-amino-4-deoxychorismate lyase PabC 1315570..1316691 Arcobacter butzleri RM4018 5623300 YP_001490240.1 CDS icd NC_009850.1 1316810 1319002 D Pfam match to PF03971 IDH, score 1106, E-value 0.0; isocitrate dehydrogenase 1316810..1319002 Arcobacter butzleri RM4018 5623301 YP_001490241.1 CDS mdh NC_009850.1 1319102 1320046 D Pfam matches to PF00056 Ldh_1_N, score 128.6, E-value 1.6E-035, and to PF02866 Ldh_1_C, score 126, E-value 9.9E-035; malate dehydrogenase 1319102..1320046 Arcobacter butzleri RM4018 5623302 YP_001490242.1 CDS Abu_1316 NC_009850.1 1320146 1320424 D cytochrome c 1320146..1320424 Arcobacter butzleri RM4018 5623303 YP_001490243.1 CDS Abu_1317 NC_009850.1 1320446 1320850 R hypothetical protein complement(1320446..1320850) Arcobacter butzleri RM4018 5623304 YP_001490244.1 CDS Abu_1318 NC_009850.1 1320937 1322214 D Pfam match to PF00877 NLPC_P60, score 20.7, E-value 3.4E-006; hypothetical protein 1320937..1322214 Arcobacter butzleri RM4018 5624291 YP_001490245.1 CDS Abu_1319 NC_009850.1 1322235 1322513 R hypothetical protein complement(1322235..1322513) Arcobacter butzleri RM4018 5624292 YP_001490246.1 CDS mraW NC_009850.1 1322506 1323408 R Pfam match to PF01795 Methyltransf_5, score 409.5, E-value 4.2E-120; S-adenosyl-methyltransferase MraW complement(1322506..1323408) Arcobacter butzleri RM4018 5624293 YP_001490247.1 CDS Abu_1321 NC_009850.1 1323468 1324046 D hypothetical protein 1323468..1324046 Arcobacter butzleri RM4018 5624294 YP_001490248.1 CDS hup NC_009850.1 1324160 1324435 D Pfam match to PF00216 Bac_DNA_binding, score 143.2, E-value 6.4E-040; DNA-binding protein HU 1324160..1324435 Arcobacter butzleri RM4018 5624295 YP_001490249.1 CDS Abu_1324 NC_009850.1 1324763 1325980 D Pfam match to PF00589 Phage_integrase, score 24.4, E-value 1.2E-006; phage integrase 1324763..1325980 Arcobacter butzleri RM4018 5624297 YP_001490250.1 CDS Abu_1325 NC_009850.1 1326728 1326940 R hypothetical protein complement(1326728..1326940) Arcobacter butzleri RM4018 5624298 YP_001490251.1 CDS Abu_1326 NC_009850.1 1327010 1327564 R hypothetical protein complement(1327010..1327564) Arcobacter butzleri RM4018 5624299 YP_001490252.1 CDS Abu_1327 NC_009850.1 1327649 1327987 R hypothetical protein complement(1327649..1327987) Arcobacter butzleri RM4018 5624300 YP_001490253.1 CDS Abu_1328 NC_009850.1 1328133 1328930 R hypothetical protein complement(1328133..1328930) Arcobacter butzleri RM4018 5624301 YP_001490254.1 CDS Abu_1329 NC_009850.1 1329234 1330316 D hypothetical protein 1329234..1330316 Arcobacter butzleri RM4018 5624302 YP_001490255.1 CDS Abu_1330 NC_009850.1 1330422 1330694 D hypothetical protein 1330422..1330694 Arcobacter butzleri RM4018 5623828 YP_001490256.1 CDS Abu_1331 NC_009850.1 1330793 1332832 R Pfam match to PF00270 DEAD, score 27.5, E-value 2.3E-007; DEAD/DEAH box helicase domain-containing protein complement(1330793..1332832) Arcobacter butzleri RM4018 5623829 YP_001490257.1 CDS Abu_1332 NC_009850.1 1332825 1333994 R hypothetical protein complement(1332825..1333994) Arcobacter butzleri RM4018 5623830 YP_001490258.1 CDS Abu_1333 NC_009850.1 1334418 1334747 R hypothetical protein complement(1334418..1334747) Arcobacter butzleri RM4018 5623831 YP_001490259.1 CDS Abu_1334 NC_009850.1 1334980 1336623 D hypothetical protein 1334980..1336623 Arcobacter butzleri RM4018 5623832 YP_001490260.1 CDS Abu_1335 NC_009850.1 1336697 1337893 D hypothetical protein 1336697..1337893 Arcobacter butzleri RM4018 5623833 YP_001490261.1 CDS Abu_1336 NC_009850.1 1338169 1341051 R hypothetical protein complement(1338169..1341051) Arcobacter butzleri RM4018 5623834 YP_001490262.1 CDS Abu_1337 NC_009850.1 1341053 1341355 R hypothetical protein complement(1341053..1341355) Arcobacter butzleri RM4018 5623835 YP_001490263.1 CDS Abu_1338 NC_009850.1 1341378 1341731 R hypothetical protein complement(1341378..1341731) Arcobacter butzleri RM4018 5623836 YP_001490264.1 CDS Abu_1339 NC_009850.1 1341703 1342188 R hypothetical protein complement(1341703..1342188) Arcobacter butzleri RM4018 5623837 YP_001490265.1 CDS Abu_1340 NC_009850.1 1342190 1342699 R hypothetical protein complement(1342190..1342699) Arcobacter butzleri RM4018 5623838 YP_001490266.1 CDS Abu_1341 NC_009850.1 1342701 1344776 R hypothetical protein complement(1342701..1344776) Arcobacter butzleri RM4018 5623839 YP_001490267.1 CDS Abu_1342 NC_009850.1 1344778 1345620 R hypothetical protein complement(1344778..1345620) Arcobacter butzleri RM4018 5625206 YP_001490268.1 CDS Abu_1343 NC_009850.1 1345621 1346544 R hypothetical protein complement(1345621..1346544) Arcobacter butzleri RM4018 5625207 YP_001490269.1 CDS Abu_1344 NC_009850.1 1346688 1347140 R hypothetical protein complement(1346688..1347140) Arcobacter butzleri RM4018 5625208 YP_001490270.1 CDS Abu_1345 NC_009850.1 1347152 1347553 R hypothetical protein complement(1347152..1347553) Arcobacter butzleri RM4018 5625209 YP_001490271.1 CDS Abu_1346 NC_009850.1 1347563 1348354 R hypothetical protein complement(1347563..1348354) Arcobacter butzleri RM4018 5625210 YP_001490272.1 CDS Abu_1347 NC_009850.1 1348534 1349172 R hypothetical protein complement(1348534..1349172) Arcobacter butzleri RM4018 5625211 YP_001490273.1 CDS Abu_1348 NC_009850.1 1349250 1349483 R hypothetical protein complement(1349250..1349483) Arcobacter butzleri RM4018 5625212 YP_001490274.1 CDS Abu_1349 NC_009850.1 1349495 1349716 R hypothetical protein complement(1349495..1349716) Arcobacter butzleri RM4018 5625213 YP_001490275.1 CDS Abu_1350 NC_009850.1 1349713 1350192 R hypothetical protein complement(1349713..1350192) Arcobacter butzleri RM4018 5625214 YP_001490276.1 CDS Abu_1351 NC_009850.1 1350231 1350605 R hypothetical protein complement(1350231..1350605) Arcobacter butzleri RM4018 5625215 YP_001490277.1 CDS Abu_1352 NC_009850.1 1350938 1351390 D Pfam match to PF07022 Phage_CI_repr, score 21.8, E-value 1.8E-005; hypothetical protein 1350938..1351390 Arcobacter butzleri RM4018 5625216 YP_001490278.1 CDS Abu_1353 NC_009850.1 1351526 1351933 R Pfam match to PF02082 Rrf2, score 101.2, E-value 1.9E-030; hypothetical protein complement(1351526..1351933) Arcobacter butzleri RM4018 5625217 YP_001490279.1 CDS norB NC_009850.1 1352079 1354313 D nitric oxide reductase, cytochrome b subunit 1352079..1354313 Arcobacter butzleri RM4018 5625218 YP_001490280.1 CDS Abu_1355 NC_009850.1 1354345 1354914 R hypothetical protein complement(1354345..1354914) Arcobacter butzleri RM4018 5623136 YP_001490281.1 CDS Abu_1356 NC_009850.1 1354911 1356080 R Pfam match to PF01266 DAO, score 50.6, E-value 3.7E-014; D-amino acid oxidase domain-containing protein complement(1354911..1356080) Arcobacter butzleri RM4018 5623137 YP_001490282.1 CDS Abu_1357 NC_009850.1 1356077 1356391 R hypothetical protein complement(1356077..1356391) Arcobacter butzleri RM4018 5623138 YP_001490283.1 CDS Abu_1358 NC_009850.1 1356506 1356874 D Pfam match to PF00072 Response_reg, score 70.9, E-value 2.9E-021; response regulator receiver domain-containing protein 1356506..1356874 Arcobacter butzleri RM4018 5623139 YP_001490284.1 CDS Abu_1359 NC_009850.1 1356874 1357491 D Pfam match to PF04509 CheC, score 28.7, E-value 1.9E-005; inhibitor of MCP methylation, CheC 1356874..1357491 Arcobacter butzleri RM4018 5623140 YP_001490285.1 CDS Abu_1360 NC_009850.1 1357488 1358981 D Pfam matches to PF02518 HATPase_c, score 66.6, E-value 7.1E-017, and to PF00989 PAS, score 21.4, E-value 5.5E-006; two-component sensor histidine kinase 1357488..1358981 Arcobacter butzleri RM4018 5623141 YP_001490286.1 CDS cbpA NC_009850.1 1359058 1359927 D Pfam matches to PF00226 DnaJ, score 127.4, E-value 3.1E-037, and to PF01556 DnaJ_C, score 67.4, E-value 4.1E-017; curved DNA-binding protein CbpA 1359058..1359927 Arcobacter butzleri RM4018 5623142 YP_001490287.1 CDS Abu_1362 NC_009850.1 1359939 1360319 D Pfam match to PF00376 MerR, score 42.3, E-value 6.8E-011; MerR family transcriptional regulator 1359939..1360319 Arcobacter butzleri RM4018 5623143 YP_001490288.1 CDS Abu_1363 NC_009850.1 1360392 1361384 D Pfam match to PF00529 HlyD, score 28.9, E-value 2E-007; HlyD family secretion protein 1360392..1361384 Arcobacter butzleri RM4018 5623144 YP_001490289.1 CDS Abu_1364 NC_009850.1 1361371 1363071 D Pfam match to PF00005 ABC_tran, score 173, E-value 6.8E-049; ABC transporter, ATP-binding protein 1361371..1363071 Arcobacter butzleri RM4018 5623145 YP_001490290.1 CDS Abu_1365 NC_009850.1 1363072 1364160 D Pfam match to PF01061 ABC2_membrane, score 85.3, E-value 1.7E-023; ABC transporter, permease 1363072..1364160 Arcobacter butzleri RM4018 5623146 YP_001490291.1 CDS Abu_1366 NC_009850.1 1364160 1365251 D Pfam match to PF01061 ABC2_membrane, score 117.5, E-value 1.8E-032; ABC transporter, permease 1364160..1365251 Arcobacter butzleri RM4018 5623147 YP_001490292.1 CDS Abu_1367 NC_009850.1 1365252 1366331 R Pfam match to PF04332 DUF475, score 282.4, E-value 8.2E-082; hypothetical protein complement(1365252..1366331) Arcobacter butzleri RM4018 5623148 YP_001490293.1 CDS brnQ NC_009850.1 1366420 1367712 R Pfam match to PF05525 Branch_AA_trans, score 392.7, E-value 2.3E-117; branched-chain amino acid transport system II carrier protein complement(1366420..1367712) Arcobacter butzleri RM4018 5624688 YP_001490294.1 CDS Abu_1369 NC_009850.1 1367763 1368620 R hypothetical protein complement(1367763..1368620) Arcobacter butzleri RM4018 5624689 YP_001490295.1 CDS Abu_1371 NC_009850.1 1368801 1369244 R hypothetical protein complement(1368801..1369244) Arcobacter butzleri RM4018 5624691 YP_001490296.1 CDS carB NC_009850.1 1369244 1372489 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(1369244..1372489) Arcobacter butzleri RM4018 5624692 YP_001490297.1 CDS Abu_1373 NC_009850.1 1372604 1373422 D Pfam match to PF01522 Polysacc_deac_1, score 66.6, E-value 1.7E-018; polysaccharide deacetylase 1372604..1373422 Arcobacter butzleri RM4018 5624693 YP_001490298.1 CDS nhaA NC_009850.1 1373437 1374732 R exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter complement(1373437..1374732) Arcobacter butzleri RM4018 5624694 YP_001490299.1 CDS Abu_1375 NC_009850.1 1374755 1374952 R hypothetical protein complement(1374755..1374952) Arcobacter butzleri RM4018 5624695 YP_001490300.1 CDS metX NC_009850.1 1374949 1376058 R Pfam match to PF00561 Abhydrolase_1, score 43.6, E-value 5E-012; homoserine O-acetyltransferase complement(1374949..1376058) Arcobacter butzleri RM4018 5624696 YP_001490301.1 CDS Abu_1377 NC_009850.1 1376169 1378526 R Pfam matches to PF00593 TonB_dep_Rec, score 82.5, E-value 1.2E-021, and to PF07715 Plug, score 63.2, E-value 7.7E-016; TonB-dependent receptor protein complement(1376169..1378526) Arcobacter butzleri RM4018 5624697 YP_001490302.1 CDS Abu_1378 NC_009850.1 1378839 1379102 D hypothetical protein 1378839..1379102 Arcobacter butzleri RM4018 5624698 YP_001490303.1 CDS ftsZ NC_009850.1 1379134 1380267 R Pfam matches to PF00091 Tubulin, score 255, E-value 2.7E-075, and to PF03953 Tubulin_C, score 60.8, E-value 6E-017; cell division protein FtsZ complement(1379134..1380267) Arcobacter butzleri RM4018 5624699 YP_001490304.1 CDS ftsA NC_009850.1 1380267 1381658 R Pfam match to PF02491 FtsA, score 103, E-value 8E-028; cell division protein FtsA complement(1380267..1381658) Arcobacter butzleri RM4018 5624700 YP_001490305.1 CDS Abu_1381 NC_009850.1 1381663 1383120 R hypothetical protein complement(1381663..1383120) Arcobacter butzleri RM4018 5624992 YP_001490306.1 CDS recD NC_009850.1 1383183 1385510 R exodeoxyribonuclease V, alpha subunit complement(1383183..1385510) Arcobacter butzleri RM4018 5624993 YP_001490307.1 CDS Abu_1383 NC_009850.1 1385510 1385875 R hypothetical protein complement(1385510..1385875) Arcobacter butzleri RM4018 5624994 YP_001490308.1 CDS Abu_1384 NC_009850.1 1385872 1386222 R Pfam match to PF03960 ArsC, score 86.7, E-value 7E-019; arsenate reductase complement(1385872..1386222) Arcobacter butzleri RM4018 5624995 YP_001490309.1 CDS Abu_1385 NC_009850.1 1386337 1387161 R hypothetical protein complement(1386337..1387161) Arcobacter butzleri RM4018 5624996 YP_001490310.1 CDS Abu_1386 NC_009850.1 1387218 1387508 R Pfam match to PF05016 Plasmid_stabil, score 40.2, E-value 2.6E-010; hypothetical protein complement(1387218..1387508) Arcobacter butzleri RM4018 5624997 YP_001490311.1 CDS Abu_1387 NC_009850.1 1387495 1387725 R hypothetical protein complement(1387495..1387725) Arcobacter butzleri RM4018 5624998 YP_001490312.1 CDS Abu_1388 NC_009850.1 1387896 1389587 D hypothetical protein 1387896..1389587 Arcobacter butzleri RM4018 5624999 YP_001490313.1 CDS Abu_1389 NC_009850.1 1389590 1389874 D Pfam match to PF01312 Bac_export_2, score 43.9, E-value 7E-013; FlhB domain-containing protein 1389590..1389874 Arcobacter butzleri RM4018 5625000 YP_001490314.1 CDS Abu_1390 NC_009850.1 1389885 1391621 R Pfam match to PF00005 ABC_tran, score 150, E-value 5.6E-042; ABC transporter, ATP-binding protein complement(1389885..1391621) Arcobacter butzleri RM4018 5625001 YP_001490315.1 CDS Abu_1391 NC_009850.1 1391727 1392236 D Pfam match to PF08020 DUF1706, score 256.7, E-value 4.5E-074; hypothetical protein 1391727..1392236 Arcobacter butzleri RM4018 5625002 YP_001490316.1 CDS dapD NC_009850.1 1392273 1393460 R 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD complement(1392273..1393460) Arcobacter butzleri RM4018 5625003 YP_001490317.1 CDS Abu_1393 NC_009850.1 1393562 1395565 R Pfam matches to PF00702 Hydrolase, score 100.9, E-value 2E-028, and to PF08125 Mannitol_dh_C, score 27.5, E-value 2.8E-007; HAD-superfamily hydrolase complement(1393562..1395565) Arcobacter butzleri RM4018 5625004 YP_001490318.1 CDS Abu_1394 NC_009850.1 1395870 1396241 D hypothetical protein 1395870..1396241 Arcobacter butzleri RM4018 5625396 YP_001490319.1 CDS priA NC_009850.1 1396292 1398139 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(1396292..1398139) Arcobacter butzleri RM4018 5625397 YP_001490320.1 CDS Abu_1396 NC_009850.1 1398139 1398534 R hypothetical protein complement(1398139..1398534) Arcobacter butzleri RM4018 5623104 YP_001490321.1 CDS Abu_1397 NC_009850.1 1398569 1398781 R hypothetical protein complement(1398569..1398781) Arcobacter butzleri RM4018 5623105 YP_001490322.1 CDS Abu_1398 NC_009850.1 1398778 1398972 R hypothetical protein complement(1398778..1398972) Arcobacter butzleri RM4018 5623106 YP_001490323.1 CDS Abu_1399 NC_009850.1 1399022 1399435 R hypothetical protein complement(1399022..1399435) Arcobacter butzleri RM4018 5623107 YP_001490324.1 CDS hypA NC_009850.1 1399509 1399880 R Pfam match to PF01155 HypA, score 168.2, E-value 1.9E-047; hydrogenase expression/formation protein HypA complement(1399509..1399880) Arcobacter butzleri RM4018 5623108 YP_001490325.1 CDS hypE NC_009850.1 1399984 1400982 R Pfam matches to PF02769 AIRS_C, score 103.6, E-value 5.2E-028, and to PF00586 AIRS, score 100.6, E-value 4.2E-027; hydrogenase expression/formation protein HypE complement(1399984..1400982) Arcobacter butzleri RM4018 5623109 YP_001490326.1 CDS Abu_1402 NC_009850.1 1400983 1401339 R hypothetical protein complement(1400983..1401339) Arcobacter butzleri RM4018 5624933 YP_001490327.1 CDS Abu_1403 NC_009850.1 1401349 1402197 R Pfam match to PF03446 NAD_binding_2, score 259.5, E-value 6.1E-075; 3-hydroxyisobutyrate dehydrogenase complement(1401349..1402197) Arcobacter butzleri RM4018 5624934 YP_001490328.1 CDS Abu_1404 NC_009850.1 1402194 1403705 R Pfam match to PF07728 AAA_5, score 39.6, E-value 2.5E-011; McrBC endonuclease McrB complement(1402194..1403705) Arcobacter butzleri RM4018 5624935 YP_001490329.1 CDS Abu_1405 NC_009850.1 1403698 1404861 R McrBC catalytic subunit McrC complement(1403698..1404861) Arcobacter butzleri RM4018 5624936 YP_001490330.1 CDS hypD NC_009850.1 1404870 1405994 R Pfam match to PF01924 HypD, score 696.6, E-value 1.7E-206; hydrogenase expression/formation protein HypD complement(1404870..1405994) Arcobacter butzleri RM4018 5624937 YP_001490331.1 CDS hypC NC_009850.1 1406008 1406289 R Pfam match to PF01455 HupF_HypC, score 90.7, E-value 3.9E-024; hydrogenase expression/formation protein HypC complement(1406008..1406289) Arcobacter butzleri RM4018 5624938 YP_001490332.1 CDS hypB NC_009850.1 1406415 1407236 R Pfam match to PF02492 cobW, score 191.4, E-value 3.1E-055; hydrogenase expression/formation protein HypB complement(1406415..1407236) Arcobacter butzleri RM4018 5624939 YP_001490333.1 CDS Abu_1409 NC_009850.1 1407348 1407989 D hypothetical protein 1407348..1407989 Arcobacter butzleri RM4018 5624940 YP_001490334.1 CDS Abu_1410 NC_009850.1 1408077 1410050 D Pfam match to PF00015 MCPsignal, score 145.6, E-value 1.2E-040; methyl-accepting chemotaxis protein 1408077..1410050 Arcobacter butzleri RM4018 5624941 YP_001490335.1 CDS Abu_1411 NC_009850.1 1410068 1410910 R Pfam match to PF02588 DUF161, score 61.4, E-value 2.6E-015; hypothetical protein complement(1410068..1410910) Arcobacter butzleri RM4018 5624942 YP_001490336.1 CDS Abu_1412 NC_009850.1 1410925 1412160 R Pfam match to PF03486 HI0933_like, score 402.1, E-value 7.2E-118; HI0933-like protein complement(1410925..1412160) Arcobacter butzleri RM4018 5624943 YP_001490337.1 CDS Abu_1413 NC_009850.1 1412237 1413343 D Pfam match to PF05661 DUF808, score 281.5, E-value 1.5E-081; hypothetical protein 1412237..1413343 Arcobacter butzleri RM4018 5624944 YP_001490338.1 CDS Abu_1414 NC_009850.1 1413487 1414068 R hypothetical protein complement(1413487..1414068) Arcobacter butzleri RM4018 5624945 YP_001490339.1 CDS Abu_1415 NC_009850.1 1414101 1414880 R hypothetical protein complement(1414101..1414880) Arcobacter butzleri RM4018 5623079 YP_001490340.1 CDS Abu_1416 NC_009850.1 1414987 1415691 R Pfam match to PF04338 DUF481, score 37, E-value 1.1E-011; hypothetical protein complement(1414987..1415691) Arcobacter butzleri RM4018 5623080 YP_001490341.1 CDS Abu_1417 NC_009850.1 1415828 1416130 D hypothetical protein 1415828..1416130 Arcobacter butzleri RM4018 5623081 YP_001490342.1 CDS Abu_1418 NC_009850.1 1416159 1418066 R hypothetical protein complement(1416159..1418066) Arcobacter butzleri RM4018 5623082 YP_001490343.1 CDS thiI NC_009850.1 1418151 1419617 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(1418151..1419617) Arcobacter butzleri RM4018 5623083 YP_001490344.1 CDS Abu_1420 NC_009850.1 1419705 1419962 D hypothetical protein 1419705..1419962 Arcobacter butzleri RM4018 5623084 YP_001490345.1 CDS Abu_1421 NC_009850.1 1419972 1420454 R hypothetical protein complement(1419972..1420454) Arcobacter butzleri RM4018 5623085 YP_001490346.1 CDS Abu_1422 NC_009850.1 1420480 1421739 R Pfam match to PF07399 DUF1504, score 630.7, E-value 1.1E-186; hypothetical protein complement(1420480..1421739) Arcobacter butzleri RM4018 5623086 YP_001490347.1 CDS hypF NC_009850.1 1422129 1424378 R Pfam matches to PF01300 Sua5_yciO_yrdC, score 161.8, E-value 1.6E-045, and to PF07503 zf-HYPF, score 67.8, E-value 3.2E-017, and to PF00708 Acylphosphatase, score 30.1, E-value 2.4E-008; transcriptional regulatory protein HypF complement(1422129..1424378) Arcobacter butzleri RM4018 5623087 YP_001490348.1 CDS Abu_1424 NC_009850.1 1424409 1426028 R hypothetical protein complement(1424409..1426028) Arcobacter butzleri RM4018 5623088 YP_001490349.1 CDS hydD NC_009850.1 1426012 1426590 R Pfam match to PF01750 HycI, score 78.2, E-value 2.4E-020; Ni/Fe hydrogenase, expression/formation protein complement(1426012..1426590) Arcobacter butzleri RM4018 5623089 YP_001490350.1 CDS hydC NC_009850.1 1426572 1427237 R Pfam match to PF01292 Ni_hydr_CYTB, score 86.9, E-value 5.5E-023; Ni/Fe hydrogenase, cytochrome b subunit complement(1426572..1427237) Arcobacter butzleri RM4018 5623090 YP_001490351.1 CDS hydB NC_009850.1 1427259 1428989 R Pfam match to PF00374 NiFeSe_Hases, score 888.5, E-value 2.7E-264; Ni/Fe-hydrogenase, large subunit complement(1427259..1428989) Arcobacter butzleri RM4018 5623091 YP_001490352.1 CDS hydA NC_009850.1 1428979 1430157 R Pfam matches to PF08425 NiFe_dehyd_N, score 166.1, E-value 7.9E-047, and to PF01058 Oxidored_q6, score 6.3, E-value 1.3E-005; Ni/Fe-hydrogenase, small subunit complement(1428979..1430157) Arcobacter butzleri RM4018 5623319 YP_001490353.1 CDS Abu_1429 NC_009850.1 1430395 1431354 R Pfam match to PF04773 FecR, score 78.5, E-value 1.9E-020; sigma factor regulatory protein FecR/PupR family complement(1430395..1431354) Arcobacter butzleri RM4018 5623320 YP_001490354.1 CDS Abu_1430 NC_009850.1 1431357 1431833 R Pfam match to PF08281 Sigma70_r4_2, score 33.9, E-value 4.4E-009; ECF subfamily RNA polymerase sigma factor complement(1431357..1431833) Arcobacter butzleri RM4018 5623321 YP_001490355.1 CDS Abu_1431 NC_009850.1 1431933 1433483 R hypothetical protein complement(1431933..1433483) Arcobacter butzleri RM4018 5623322 YP_001490356.1 CDS hyaD NC_009850.1 1433449 1434039 R Pfam match to PF01750 HycI, score 68.4, E-value 4.1E-018; Ni/Fe hydrogenase, expression/formation protein complement(1433449..1434039) Arcobacter butzleri RM4018 5623323 YP_001490357.1 CDS hyaC NC_009850.1 1434128 1434856 R Ni/Fe hydrogenase, cytochrome b subunit complement(1434128..1434856) Arcobacter butzleri RM4018 5623324 YP_001490358.1 CDS hyaB NC_009850.1 1434834 1436576 R Pfam match to PF00374 NiFeSe_Hases, score 863.9, E-value 7.3E-257; Ni/Fe-hydrogenase, large subunit complement(1434834..1436576) Arcobacter butzleri RM4018 5623325 YP_001490359.1 CDS hyaA NC_009850.1 1436576 1437811 R Pfam matches to PF08425 NiFe_dehyd_N, score 140.7, E-value 3.7E-039, and to PF01058 Oxidored_q6, score 7.4, E-value 1E-005; Ni/Fe-hydrogenase, small subunit complement(1436576..1437811) Arcobacter butzleri RM4018 5623326 YP_001490360.1 CDS hupL NC_009850.1 1438045 1439394 R Pfam match to PF00374 NiFeSe_Hases, score -0.8, E-value 1.1E-014; Ni/Fe-dependent hydrogenase, large subunit complement(1438045..1439394) Arcobacter butzleri RM4018 5623327 YP_001490361.1 CDS hupS NC_009850.1 1439397 1440290 R Ni/Fe-dependent hydrogenase, small subunit complement(1439397..1440290) Arcobacter butzleri RM4018 5623328 YP_001490362.1 CDS Abu_1438 NC_009850.1 1440280 1440744 R TetR family transcriptional regulator complement(1440280..1440744) Arcobacter butzleri RM4018 5623329 YP_001490363.1 CDS acnB NC_009850.1 1440982 1443558 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(1440982..1443558) Arcobacter butzleri RM4018 5623330 YP_001490364.1 CDS Abu_1440 NC_009850.1 1443817 1444257 D thioesterase/acetyltransferase 1443817..1444257 Arcobacter butzleri RM4018 5623331 YP_001490365.1 CDS Abu_1441 NC_009850.1 1444247 1445242 R Pfam matches to PF00990 GGDEF, score 151, E-value 3.3E-043, and to PF08448 PAS_4, score 24, E-value 4.9E-006; GGDEF/PAS domain-containing protein complement(1444247..1445242) Arcobacter butzleri RM4018 5624242 YP_001490366.1 CDS Abu_1442 NC_009850.1 1445461 1446207 R Pfam match to PF01709 DUF28, score 342.7, E-value 5.6E-100; hypothetical protein complement(1445461..1446207) Arcobacter butzleri RM4018 5624243 YP_001490367.1 CDS Abu_1443 NC_009850.1 1446307 1447050 D Pfam match to PF04333 VacJ, score 232.5, E-value 8.6E-067; VacJ-like lipoprotein 1446307..1447050 Arcobacter butzleri RM4018 5624244 YP_001490368.1 CDS Abu_1444 NC_009850.1 1447054 1447644 D Pfam match to PF05494 Tol_Tol_Ttg2, score 108, E-value 2.5E-029; periplasmic protein 1447054..1447644 Arcobacter butzleri RM4018 5624245 YP_001490369.1 CDS Abu_1445 NC_009850.1 1447644 1450130 D hypothetical protein 1447644..1450130 Arcobacter butzleri RM4018 5624246 YP_001490370.1 CDS Abu_1446 NC_009850.1 1450130 1450693 D Pfam match to PF03641 Lysine_decarbox, score 162.4, E-value 1.1E-045; lysine decarboxylase-like protein 1450130..1450693 Arcobacter butzleri RM4018 5624247 YP_001490371.1 CDS Abu_1447 NC_009850.1 1450870 1451505 D Pfam match to PF00702 Hydrolase, score 94.5, E-value 1.3E-026; HAD-superfamily hydrolase 1450870..1451505 Arcobacter butzleri RM4018 5624248 YP_001490372.1 CDS Abu_1448 NC_009850.1 1451502 1452068 R Pfam match to PF08534 Redoxin, score 68.4, E-value 2.1E-017; lipoprotein thiredoxin complement(1451502..1452068) Arcobacter butzleri RM4018 5624249 YP_001490373.1 CDS dsbA NC_009850.1 1452081 1452728 R Pfam match to PF01323 DSBA, score 9.4, E-value 1.6E-005; DSBA-like thioredoxin domain-containing protein complement(1452081..1452728) Arcobacter butzleri RM4018 5624250 YP_001490374.1 CDS dsbB NC_009850.1 1452718 1453128 R Pfam match to PF02600 DsbB, score 92.8, E-value 9.7E-025; DsbB family disulfide bond formation protein complement(1452718..1453128) Arcobacter butzleri RM4018 5624251 YP_001490375.1 CDS Abu_1451 NC_009850.1 1453217 1455742 D Pfam match to PF00535 Glycos_transf_2, score 78.2, E-value 4.8E-023; glycosyltransferase 1453217..1455742 Arcobacter butzleri RM4018 5624252 YP_001490376.1 CDS Abu_1452 NC_009850.1 1455844 1456317 D Pfam matches to PF08281 Sigma70_r4_2, score 46.6, E-value 8.1E-013, and to PF04542 Sigma70_r2, score 27.3, E-value 4.9E-005; ECF subfamily RNA polymerase sigma factor 1455844..1456317 Arcobacter butzleri RM4018 5624253 YP_001490377.1 CDS Abu_1453 NC_009850.1 1456317 1457156 D Pfam match to PF04773 FecR, score 78.6, E-value 1.8E-020; sigma factor regulatory protein FecR/PupR family 1456317..1457156 Arcobacter butzleri RM4018 5624254 YP_001490378.1 CDS Abu_1454 NC_009850.1 1457255 1459570 D Pfam matches to PF00593 TonB_dep_Rec, score 84.9, E-value 2.3E-022, and to PF07715 Plug, score 71.6, E-value 2.2E-018, and to PF07660 STN, score 33, E-value 9.3E-007; TonB-dependent receptor protein 1457255..1459570 Arcobacter butzleri RM4018 5623801 YP_001490379.1 CDS Abu_1455 NC_009850.1 1459749 1461188 D Pfam match to PF00990 GGDEF, score 183.5, E-value 4.8E-052; GGDEF domain-containing protein 1459749..1461188 Arcobacter butzleri RM4018 5623802 YP_001490380.1 CDS Abu_1456 NC_009850.1 1461133 1462083 D Pfam match to PF01988 DUF125, score 93.5, E-value 5.8E-025; hypothetical protein 1461133..1462083 Arcobacter butzleri RM4018 5623803 YP_001490381.1 CDS betT NC_009850.1 1462103 1464088 R Pfam match to PF02028 BCCT, score 772.5, E-value 2.4E-229; high-affinity choline transport complement(1462103..1464088) Arcobacter butzleri RM4018 5623804 YP_001490382.1 CDS kefB NC_009850.1 1464222 1465838 R Pfam matches to PF00999 Na_H_Exchanger, score 204.3, E-value 2.5E-058, and to PF02254 TrkA_N, score 53.1, E-value 1.1E-013; glutathione-regulated potassium-efflux system protein KefB complement(1464222..1465838) Arcobacter butzleri RM4018 5623805 YP_001490383.1 CDS Abu_1459 NC_009850.1 1465956 1466261 D hypothetical protein 1465956..1466261 Arcobacter butzleri RM4018 5623806 YP_001490384.1 CDS glyA2 NC_009850.1 1466335 1467597 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1466335..1467597 Arcobacter butzleri RM4018 5623807 YP_001490385.1 CDS ada NC_009850.1 1467624 1468451 D Pfam matches to PF01035 DNA_binding_1, score 119.1, E-value 1.1E-032, and to PF00165 HTH_AraC, score 56.9, E-value 6.1E-014; O6-methylguanine-DNA methyltransferase 1467624..1468451 Arcobacter butzleri RM4018 5623808 YP_001490386.1 CDS Abu_1462 NC_009850.1 1468452 1469165 D Pfam match to PF00633 HHH, score 22.1, E-value 1.2E-005; endonuclease III 1468452..1469165 Arcobacter butzleri RM4018 5623809 YP_001490387.1 CDS Abu_1463 NC_009850.1 1469145 1469624 R ribonuclease H-like protein complement(1469145..1469624) Arcobacter butzleri RM4018 5623810 YP_001490388.1 CDS Abu_1464 NC_009850.1 1469661 1469954 R hypothetical protein complement(1469661..1469954) Arcobacter butzleri RM4018 5623811 YP_001490389.1 CDS Abu_1465 NC_009850.1 1469951 1470157 R hypothetical protein complement(1469951..1470157) Arcobacter butzleri RM4018 5623812 YP_001490390.1 CDS Abu_1466 NC_009850.1 1470264 1470737 R Pfam match to PF01243 Pyridox_oxidase, score 28.2, E-value 2.6E-005; pyridoxamine 5'-phosphate oxidase-related, FMN-binding complement(1470264..1470737) Arcobacter butzleri RM4018 5623813 YP_001490391.1 CDS benE NC_009850.1 1470917 1472086 D Pfam match to PF03594 BenE, score 592.5, E-value 3.5E-175; benzoate membrane transport protein 1470917..1472086 Arcobacter butzleri RM4018 5624278 YP_001490392.1 CDS argD2 NC_009850.1 1472128 1473300 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(1472128..1473300) Arcobacter butzleri RM4018 5624279 YP_001490393.1 CDS Abu_1469 NC_009850.1 1473313 1474014 R Pfam match to PF03473 MOSC, score 98.3, E-value 2.1E-026; hypothetical protein complement(1473313..1474014) Arcobacter butzleri RM4018 5624280 YP_001490394.1 CDS lipA NC_009850.1 1474095 1474970 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(1474095..1474970) Arcobacter butzleri RM4018 5624281 YP_001490395.1 CDS Abu_1471 NC_009850.1 1474982 1475686 R Pfam match to PF03099 BPL_LipA_LipB, score 24.1, E-value 5.3E-006; biotin/lipoate A/B protein ligase complement(1474982..1475686) Arcobacter butzleri RM4018 5624282 YP_001490396.1 CDS aceE NC_009850.1 1475844 1478516 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 1475844..1478516 Arcobacter butzleri RM4018 5624283 YP_001490397.1 CDS aceF NC_009850.1 1478527 1480182 D Pfam matches to PF00198 2-oxoacid_dh, score 382, E-value 8.2E-112, and to PF00364 Biotin_lipoyl, score 62.8, E-value 1.1E-016, and to PF02817 E3_binding, score 65.2, E-value 1.9E-016, and to PF00364 Biotin_lipoyl, score 54.9, E-value 1.8E-014; dihydrolipoamide acetyltransferase 1478527..1480182 Arcobacter butzleri RM4018 5624284 YP_001490398.1 CDS lpdA NC_009850.1 1480192 1481625 D Pfam matches to PF07992 Pyr_redox_2, score 220.2, E-value 4.2E-063, and to PF02852 Pyr_redox_dim, score 164.9, E-value 1.9E-046; dihydrolipoamide dehydrogenase 1480192..1481625 Arcobacter butzleri RM4018 5624285 YP_001490399.1 CDS Abu_1475 NC_009850.1 1481727 1482392 D Pfam match to PF00117 GATase, score 32.6, E-value 6.3E-008; glutamine amidotransferase, class I 1481727..1482392 Arcobacter butzleri RM4018 5624286 YP_001490400.1 CDS Abu_1476 NC_009850.1 1482503 1484842 R Pfam matches to PF00593 TonB_dep_Rec, score 90.8, E-value 3.8E-024, and to PF07715 Plug, score 72.1, E-value 1.6E-018, and to PF07660 STN, score 34, E-value 4.8E-007; TonB-dependent receptor protein complement(1482503..1484842) Arcobacter butzleri RM4018 5624287 YP_001490401.1 CDS Abu_1477 NC_009850.1 1485112 1485960 R Pfam match to PF01263 Aldose_epim, score 71.2, E-value 2.2E-020; aldose 1-epimerase, LacX complement(1485112..1485960) Arcobacter butzleri RM4018 5624288 YP_001490402.1 CDS Abu_1478 NC_009850.1 1485957 1486718 R Pfam match to PF00905 Transpeptidase, score 180.5, E-value 3.8E-051; beta-lactamase complement(1485957..1486718) Arcobacter butzleri RM4018 5624289 YP_001490403.1 CDS rhlE NC_009850.1 1486769 1488076 R Pfam matches to PF00270 DEAD, score 244.2, E-value 2.6E-070, and to PF00271 Helicase_C, score 115.1, E-value 3.9E-038; ATP-dependent RNA helicase RhlE complement(1486769..1488076) Arcobacter butzleri RM4018 5624290 YP_001490404.1 CDS Abu_1480 NC_009850.1 1488347 1489540 D hypothetical protein 1488347..1489540 Arcobacter butzleri RM4018 5624127 YP_001490405.1 CDS Abu_1481 NC_009850.1 1489715 1490695 D Pfam match to PF00145 DNA_methylase, score 475.9, E-value 4.5E-140; DNA (cytosine-5-)-methyltransferase 1489715..1490695 Arcobacter butzleri RM4018 5624128 YP_001490406.1 CDS Abu_1482 NC_009850.1 1490703 1491710 D hypothetical protein 1490703..1491710 Arcobacter butzleri RM4018 5624129 YP_001490407.1 CDS Abu_1483 NC_009850.1 1491861 1492169 R Pfam match to PF01381 HTH_3, score 30.6, E-value 1.4E-007; transcriptional regulator complement(1491861..1492169) Arcobacter butzleri RM4018 5624130 YP_001490408.1 CDS Abu_1484 NC_009850.1 1492319 1493944 D Pfam match to PF02624 YcaO, score 194.5, E-value 2.3E-055; hypothetical protein 1492319..1493944 Arcobacter butzleri RM4018 5624131 YP_001490409.1 CDS Abu_1485 NC_009850.1 1493979 1494356 D Pfam match to PF03625 DUF302, score 55.2, E-value 2E-013; hypothetical protein 1493979..1494356 Arcobacter butzleri RM4018 5624132 YP_001490410.1 CDS Abu_1486 NC_009850.1 1494359 1494832 D hypothetical protein 1494359..1494832 Arcobacter butzleri RM4018 5624133 YP_001490411.1 CDS Abu_1487 NC_009850.1 1494858 1497098 R Pfam matches to PF08376 NIT, score 229.8, E-value 5.6E-066, and to PF00015 MCPsignal, score 163.4, E-value 5.5E-046; methyl-accepting chemotaxis protein complement(1494858..1497098) Arcobacter butzleri RM4018 5624134 YP_001490412.1 CDS rnhA NC_009850.1 1497253 1498059 D Pfam match to PF00075 RnaseH, score 126.3, E-value 3E-037; ribonuclease HI 1497253..1498059 Arcobacter butzleri RM4018 5624135 YP_001490413.1 CDS Abu_1489 NC_009850.1 1498111 1499079 D Pfam match to PF00682 HMGL-like, score 44.1, E-value 8.9E-012; HMGL family protein 1498111..1499079 Arcobacter butzleri RM4018 5624136 YP_001490414.1 CDS Abu_1490 NC_009850.1 1499107 1499409 R hypothetical protein complement(1499107..1499409) Arcobacter butzleri RM4018 5624137 YP_001490415.1 CDS Abu_1491 NC_009850.1 1499449 1499859 R hypothetical protein complement(1499449..1499859) Arcobacter butzleri RM4018 5624138 YP_001490416.1 CDS dinP NC_009850.1 1499985 1501250 R Pfam match to PF00817 IMS, score 111.8, E-value 1.9E-030; DNA polymerase IV complement(1499985..1501250) Arcobacter butzleri RM4018 5624139 YP_001490417.1 CDS moeA1 NC_009850.1 1501325 1502560 R Pfam matches to PF03453 MoeA_N, score 169.7, E-value 6.9E-048, and to PF00994 MoCF_biosynth, score 143.6, E-value 1.6E-041; molybdenum cofactor biosynthesis protein A complement(1501325..1502560) Arcobacter butzleri RM4018 5625086 YP_001490418.1 CDS Abu_1494 NC_009850.1 1502570 1503553 R similar to NifS; cysteine desulfurase complement(1502570..1503553) Arcobacter butzleri RM4018 5625087 YP_001490419.1 CDS fdhD NC_009850.1 1503546 1504379 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(1503546..1504379) Arcobacter butzleri RM4018 5625088 YP_001490420.1 CDS fdhC NC_009850.1 1504376 1505335 R FdhC protein complement(1504376..1505335) Arcobacter butzleri RM4018 5625089 YP_001490421.1 CDS fdhB1 NC_009850.1 1505344 1505937 R Pfam match to PF00037 Fer4, score 37.6, E-value 3.9E-008; formate dehydrogenase, iron-sulfur subunit FdhB complement(1505344..1505937) Arcobacter butzleri RM4018 5625090 YP_001490422.1 CDS Abu_1498 NC_009850.1 1505948 1508749 R Pfam match to PF00384 Molybdopterin, score 142, E-value 2E-034; formate dehydrogenase, large subunit FdhA complement(1505948..1508749) Arcobacter butzleri RM4018 5625091 YP_001490423.1 CDS Abu_1499 NC_009850.1 1508775 1508999 R hypothetical protein complement(1508775..1508999) Arcobacter butzleri RM4018 5625092 YP_001490424.1 CDS Abu_1500 NC_009850.1 1509082 1509693 R hypothetical protein complement(1509082..1509693) Arcobacter butzleri RM4018 5625093 YP_001490425.1 CDS Abu_1501 NC_009850.1 1509686 1511359 R 4Fe-4S ferredoxin, iron-sulfur binding complement(1509686..1511359) Arcobacter butzleri RM4018 5625094 YP_001490426.1 CDS livJ NC_009850.1 1511506 1512660 D leucine/isoleucine/valine-binding protein 1511506..1512660 Arcobacter butzleri RM4018 5625095 YP_001490427.1 CDS Abu_1503 NC_009850.1 1512657 1514228 D Pfam match to PF02518 HATPase_c, score 79.5, E-value 9.7E-021; two-component sensor histidine kinase 1512657..1514228 Arcobacter butzleri RM4018 5625096 YP_001490428.1 CDS Abu_1504 NC_009850.1 1514236 1514895 D Pfam match to PF00072 Response_reg, score 59.4, E-value 9.6E-018; two-component response regulator 1514236..1514895 Arcobacter butzleri RM4018 5625097 YP_001490429.1 CDS Abu_1505 NC_009850.1 1514888 1516141 D Mn2+/Fe2+ transporter 1514888..1516141 Arcobacter butzleri RM4018 5625098 YP_001490430.1 CDS Abu_1506 NC_009850.1 1516142 1516423 R Pfam match to PF00403 HMA, score 52.2, E-value 1.6E-012; heavy-metal transporting ATPase complement(1516142..1516423) Arcobacter butzleri RM4018 5623221 YP_001490431.1 CDS Abu_1507 NC_009850.1 1516427 1516753 R similar to MerT; heavy-metal transport protein complement(1516427..1516753) Arcobacter butzleri RM4018 5623222 YP_001490432.1 CDS Abu_1508 NC_009850.1 1516750 1517844 R Pfam match to PF01841 Transglut_core, score 62.8, E-value 9.9E-016; transglutaminase complement(1516750..1517844) Arcobacter butzleri RM4018 5623223 YP_001490433.1 CDS Abu_1509 NC_009850.1 1518048 1518992 R FdhC protein complement(1518048..1518992) Arcobacter butzleri RM4018 5623224 YP_001490434.1 CDS fdhB2 NC_009850.1 1519001 1519594 R Pfam match to PF00037 Fer4, score 37.6, E-value 3.9E-008; formate dehydrogenase, iron-sulfur subunit FdhB complement(1519001..1519594) Arcobacter butzleri RM4018 5623225 YP_001490435.1 CDS fdhA2 NC_009850.1 1519605 1522403 R Pfam matches to PF00384 Molybdopterin, score 181.1, E-value 1.2E-051, and to PF01568 Molydop_binding, score 60.5, E-value 3.7E-016, and to PF04879 Molybdop_Fe4S4, score 62.3, E-value 1.4E-015, and to PF00384 Molybdopterin, score 43.1, E-value 2.1E-012; formate dehydrogenase, large subunit FdhA (cysteine containing) complement(1519605..1522403) Arcobacter butzleri RM4018 5623226 YP_001490436.1 CDS Abu_1512 NC_009850.1 1522425 1522649 R formate dehydrogenase subunit E complement(1522425..1522649) Arcobacter butzleri RM4018 5623227 YP_001490437.1 CDS selD NC_009850.1 1523138 1524175 D Pfam matches to PF02769 AIRS_C, score 47.9, E-value 3.1E-011, and to PF00586 AIRS, score 20.2, E-value 2.7E-005; selenide, water dikinase 1523138..1524175 Arcobacter butzleri RM4018 5623228 YP_001490438.1 CDS Abu_1514 NC_009850.1 1524217 1524771 R hypothetical protein complement(1524217..1524771) Arcobacter butzleri RM4018 5623229 YP_001490439.1 CDS Abu_1515 NC_009850.1 1524949 1525527 D hypothetical protein 1524949..1525527 Arcobacter butzleri RM4018 5623230 YP_001490440.1 CDS Abu_1516 NC_009850.1 1525578 1526207 D hypothetical protein 1525578..1526207 Arcobacter butzleri RM4018 5623231 YP_001490441.1 CDS Abu_1517 NC_009850.1 1526219 1526482 D hypothetical protein 1526219..1526482 Arcobacter butzleri RM4018 5623232 YP_001490442.1 CDS Abu_1518 NC_009850.1 1526484 1526858 D hypothetical protein 1526484..1526858 Arcobacter butzleri RM4018 5623233 YP_001490443.1 CDS Abu_1519 NC_009850.1 1526869 1527921 D hypothetical protein 1526869..1527921 Arcobacter butzleri RM4018 5624661 YP_001490444.1 CDS Abu_1520 NC_009850.1 1527931 1528416 D Pfam match to PF00959 Phage_lysozyme, score 28.2, E-value 2.6E-005; phage-related lysozyme 1527931..1528416 Arcobacter butzleri RM4018 5624662 YP_001490445.1 CDS Abu_1521 NC_009850.1 1528474 1528848 R hypothetical protein complement(1528474..1528848) Arcobacter butzleri RM4018 5624663 YP_001490446.1 CDS Abu_1522 NC_009850.1 1528907 1529317 R Pfam match to PF08238 Sel1, score 54, E-value 4.5E-013; Sel1 repeat-containing protein complement(1528907..1529317) Arcobacter butzleri RM4018 5624664 YP_001490447.1 CDS selA NC_009850.1 1529610 1530965 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 1529610..1530965 Arcobacter butzleri RM4018 5624666 YP_001490448.1 CDS selB NC_009850.1 1530965 1532794 D Pfam match to PF00009 GTP_EFTU, score 116.5, E-value 7.2E-032; selenocysteine-specific elongation factor 1530965..1532794 Arcobacter butzleri RM4018 5624667 YP_001490449.1 CDS Abu_1526 NC_009850.1 1532798 1534312 D DNA helicase 1532798..1534312 Arcobacter butzleri RM4018 5624668 YP_001490450.1 CDS Abu_1527 NC_009850.1 1534309 1535247 D hypothetical protein 1534309..1535247 Arcobacter butzleri RM4018 5624669 YP_001490451.1 CDS Abu_1528 NC_009850.1 1535244 1537307 D hypothetical protein 1535244..1537307 Arcobacter butzleri RM4018 5624670 YP_001490452.1 CDS Abu_1529 NC_009850.1 1537354 1538280 D hypothetical protein 1537354..1538280 Arcobacter butzleri RM4018 5624671 YP_001490453.1 CDS Abu_1530 NC_009850.1 1538365 1540536 D hypothetical protein 1538365..1540536 Arcobacter butzleri RM4018 5624672 YP_001490454.1 CDS Abu_1531 NC_009850.1 1540576 1541322 D hypothetical protein 1540576..1541322 Arcobacter butzleri RM4018 5624673 YP_001490455.1 CDS Abu_1536 NC_009850.1 1541809 1543707 R Pfam matches to PF02518 HATPase_c, score 56.5, E-value 8.3E-014, and to PF08269 Cache_2, score 39, E-value 1.5E-008; two-component sensor histidine kinase complement(1541809..1543707) Arcobacter butzleri RM4018 5623566 YP_001490456.1 CDS Abu_1537 NC_009850.1 1543848 1544357 D Pfam match to PF03358 FMN_red, score 27.2, E-value 1.6E-007; FMN reductase 1543848..1544357 Arcobacter butzleri RM4018 5623567 YP_001490457.1 CDS Abu_1538 NC_009850.1 1544415 1545791 D Pfam match to PF02562 PhoH, score 23, E-value 3.7E-006; PhoH family protein 1544415..1545791 Arcobacter butzleri RM4018 5623568 YP_001490458.1 CDS Abu_1539 NC_009850.1 1545860 1547476 D hypothetical protein 1545860..1547476 Arcobacter butzleri RM4018 5623569 YP_001490459.1 CDS Abu_1540 NC_009850.1 1547479 1549326 R Pfam matches to PF00563 EAL, score 200.3, E-value 4.3E-057, and to PF00989 PAS, score 44.3, E-value 6.6E-013, and to PF00990 GGDEF, score -16.3, E-value 7.7E-006; EAL/PAS/GGDEF domain-containing protein complement(1547479..1549326) Arcobacter butzleri RM4018 5623570 YP_001490460.1 CDS pdxH NC_009850.1 1549302 1549940 D Pfam match to PF01243 Pyridox_oxidase, score 92.7, E-value 1E-024; pyridoxamine 5'-phosphate oxidase 1549302..1549940 Arcobacter butzleri RM4018 5623571 YP_001490461.1 CDS Abu_1542 NC_009850.1 1549946 1552063 R Pfam matches to PF00990 GGDEF, score 207.3, E-value 3.3E-059, and to PF08447 PAS_3, score 33.5, E-value 1.3E-008; GGDEF/PAS domain-containing protein complement(1549946..1552063) Arcobacter butzleri RM4018 5623572 YP_001490462.1 CDS dbpA NC_009850.1 1552101 1553465 R Pfam matches to PF00270 DEAD, score 234.8, E-value 1.7E-067, and to PF00271 Helicase_C, score 104.1, E-value 1.9E-034, and to PF03880 DbpA, score 31.3, E-value 1.3E-006; ATP-dependent RNA helicase DbpA complement(1552101..1553465) Arcobacter butzleri RM4018 5623573 YP_001490463.1 CDS Abu_1544 NC_009850.1 1553468 1554001 R hypothetical protein complement(1553468..1554001) Arcobacter butzleri RM4018 5623574 YP_001490464.1 CDS Abu_1545 NC_009850.1 1554096 1554953 D hypothetical protein 1554096..1554953 Arcobacter butzleri RM4018 5623899 YP_001490465.1 CDS Abu_1546 NC_009850.1 1554974 1555558 R hypothetical protein complement(1554974..1555558) Arcobacter butzleri RM4018 5623900 YP_001490466.1 CDS htpG NC_009850.1 1555695 1557605 R molecular chaperone; heat shock protein 90 complement(1555695..1557605) Arcobacter butzleri RM4018 5623901 YP_001490467.1 CDS katG NC_009850.1 1557824 1560031 D Pfam match to PF00141 peroxidase, score 358.7, E-value 8.7E-105; catalase/peroxidase HPI 1557824..1560031 Arcobacter butzleri RM4018 5623902 YP_001490468.1 CDS ciaB NC_009850.1 1560142 1562025 D CiaB protein 1560142..1562025 Arcobacter butzleri RM4018 5623903 YP_001490469.1 CDS Abu_1550 NC_009850.1 1562038 1562508 R Pfam match to PF00023 Ank, score 37.6, E-value 1.6E-009; ankyrin repeat-containing protein complement(1562038..1562508) Arcobacter butzleri RM4018 5623904 YP_001490470.1 CDS pqiB NC_009850.1 1562530 1565184 R Pfam match to PF02470 MCE, score 78.6, E-value 1.8E-020; paraquat-inducible protein B complement(1562530..1565184) Arcobacter butzleri RM4018 5623905 YP_001490471.1 CDS Abu_1553 NC_009850.1 1566462 1566896 D Pfam match to PF01152 Bac_globin, score 29.6, E-value 2.1E-007; hypothetical protein 1566462..1566896 Arcobacter butzleri RM4018 5623907 YP_001490472.1 CDS Abu_1554 NC_009850.1 1566969 1569524 D Pfam matches to PF00563 EAL, score 264, E-value 2.8E-076, and to PF00990 GGDEF, score 213, E-value 6.4E-061; EAL/GGDEF domain-containing protein 1566969..1569524 Arcobacter butzleri RM4018 5623908 YP_001490473.1 CDS Abu_1555 NC_009850.1 1569535 1570017 R hypothetical protein complement(1569535..1570017) Arcobacter butzleri RM4018 5623909 YP_001490474.1 CDS Abu_1556 NC_009850.1 1570121 1571062 D hypothetical protein 1570121..1571062 Arcobacter butzleri RM4018 5623910 YP_001490475.1 CDS Abu_1557 NC_009850.1 1571397 1571864 R Pfam match to PF00892 DUF6, score 64.7, E-value 2.8E-016; hypothetical protein complement(1571397..1571864) Arcobacter butzleri RM4018 5623911 YP_001490476.1 CDS Abu_1558 NC_009850.1 1571993 1572580 D Pfam match to PF04073 YbaK, score 205.6, E-value 1.1E-058; hypothetical protein 1571993..1572580 Arcobacter butzleri RM4018 5623466 YP_001490477.1 CDS Abu_1559 NC_009850.1 1572582 1573655 R DNA alkylation repair enzyme complement(1572582..1573655) Arcobacter butzleri RM4018 5623467 YP_001490478.1 CDS Abu_1560 NC_009850.1 1573664 1574524 R DNA-binding protein complement(1573664..1574524) Arcobacter butzleri RM4018 5623468 YP_001490479.1 CDS Abu_1561 NC_009850.1 1574592 1575956 R hypothetical protein complement(1574592..1575956) Arcobacter butzleri RM4018 5623469 YP_001490480.1 CDS Abu_1562 NC_009850.1 1575967 1576611 R Pfam match to PF01965 DJ-1_PfpI, score 50.3, E-value 5.8E-012; ThiJ/PfpI family transcriptional regulator complement(1575967..1576611) Arcobacter butzleri RM4018 5623470 YP_001490481.1 CDS Abu_1563 NC_009850.1 1576789 1577448 D hypothetical protein 1576789..1577448 Arcobacter butzleri RM4018 5623471 YP_001490482.1 CDS Abu_1564 NC_009850.1 1577728 1580109 R Pfam matches to PF00593 TonB_dep_Rec, score 92.1, E-value 1.5E-024, and to PF07715 Plug, score 75.7, E-value 1.3E-019; TonB-dependent receptor protein complement(1577728..1580109) Arcobacter butzleri RM4018 5623472 YP_001490483.1 CDS hicA NC_009850.1 1580277 1580501 D Hif-contiguous protein A 1580277..1580501 Arcobacter butzleri RM4018 5623473 YP_001490484.1 CDS hicB NC_009850.1 1580525 1580869 D Pfam match to PF05534 HicB, score 70.8, E-value 2.4E-019; Hif-contiguous protein B 1580525..1580869 Arcobacter butzleri RM4018 5623474 YP_001490485.1 CDS Abu_1567 NC_009850.1 1580874 1581848 R Pfam match to PF04773 FecR, score 70.8, E-value 4E-018; sigma factor regulatory protein FecR/PupR family complement(1580874..1581848) Arcobacter butzleri RM4018 5623475 YP_001490486.1 CDS Abu_1568 NC_009850.1 1581849 1582322 R Pfam matches to PF08281 Sigma70_r4_2, score 49, E-value 1.7E-013, and to PF04542 Sigma70_r2, score 36.8, E-value 6.9E-008; ECF subfamily RNA polymerase sigma factor complement(1581849..1582322) Arcobacter butzleri RM4018 5623476 YP_001490487.1 CDS speB NC_009850.1 1582459 1583520 D Pfam match to PF00491 Arginase, score 70.5, E-value 4.8E-018; arginase 1582459..1583520 Arcobacter butzleri RM4018 5623477 YP_001490488.1 CDS leuA2 NC_009850.1 1583543 1584844 R Pfam match to PF00682 HMGL-like, score 273.4, E-value 4E-079; 2-isopropylmalate synthase complement(1583543..1584844) Arcobacter butzleri RM4018 5623478 YP_001490489.1 CDS Abu_1571 NC_009850.1 1585025 1585810 R Pfam match to PF00165 HTH_AraC, score 47.4, E-value 4.5E-011; AraC family transcriptional regulator complement(1585025..1585810) Arcobacter butzleri RM4018 5623924 YP_001490490.1 CDS Abu_1572 NC_009850.1 1585820 1586149 R Pfam match to PF02452 PemK, score 36.5, E-value 8.2E-008; PemK family transcriptional regulator complement(1585820..1586149) Arcobacter butzleri RM4018 5623925 YP_001490491.1 CDS Abu_1573 NC_009850.1 1586143 1586403 R Pfam match to PF04014 SpoVT_AbrB, score 30.9, E-value 4E-006; hypothetical protein complement(1586143..1586403) Arcobacter butzleri RM4018 5623926 YP_001490492.1 CDS Abu_1574 NC_009850.1 1586472 1587425 R Pfam match to PF00165 HTH_AraC, score 35.2, E-value 2E-007; AraC family transcriptional regulator complement(1586472..1587425) Arcobacter butzleri RM4018 5623927 YP_001490493.1 CDS Abu_1575 NC_009850.1 1587544 1589661 D Pfam matches to PF00593 TonB_dep_Rec, score 93.6, E-value 5.4E-025, and to PF07715 Plug, score 78.4, E-value 2E-020; TonB-dependent receptor protein 1587544..1589661 Arcobacter butzleri RM4018 5623928 YP_001490494.1 CDS sodB NC_009850.1 1589687 1590262 R Pfam matches to PF02777 Sod_Fe_C, score 215.5, E-value 8.7E-072, and to PF00081 Sod_Fe_N, score 157.7, E-value 2.8E-044; superoxide dismutase complement(1589687..1590262) Arcobacter butzleri RM4018 5623929 YP_001490495.1 CDS Abu_1577 NC_009850.1 1590340 1591548 R Pfam match to PF00924 MS_channel, score 127.3, E-value 3.9E-035; hypothetical protein complement(1590340..1591548) Arcobacter butzleri RM4018 5623930 YP_001490496.1 CDS ppa NC_009850.1 1591620 1592540 R catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase complement(1591620..1592540) Arcobacter butzleri RM4018 5623931 YP_001490497.1 CDS Abu_1579 NC_009850.1 1592660 1593259 R Pfam match to PF06555 DUF1121, score 105.8, E-value 1.1E-028; hypothetical protein complement(1592660..1593259) Arcobacter butzleri RM4018 5623932 YP_001490498.1 CDS Abu_1580 NC_009850.1 1593265 1593804 R asparaginase complement(1593265..1593804) Arcobacter butzleri RM4018 5623933 YP_001490499.1 CDS aspA NC_009850.1 1593755 1595161 R Pfam match to PF00206 Lyase_1, score 463.1, E-value 3.2E-136; aspartate ammonia-lyase complement(1593755..1595161) Arcobacter butzleri RM4018 5623934 YP_001490500.1 CDS Abu_1582 NC_009850.1 1595227 1595907 R Pfam match to PF00072 Response_reg, score 93.7, E-value 3E-028; two-component response regulator complement(1595227..1595907) Arcobacter butzleri RM4018 5623935 YP_001490501.1 CDS Abu_1583 NC_009850.1 1595910 1597034 R Pfam match to PF02518 HATPase_c, score 78.4, E-value 2.1E-020; two-component sensor histidine kinase complement(1595910..1597034) Arcobacter butzleri RM4018 5623936 YP_001490502.1 CDS Abu_1584 NC_009850.1 1597106 1598542 R Pfam match to PF01235 Na_Ala_symp, score 544.4, E-value 1.1E-160; sodium:alanine symporter complement(1597106..1598542) Arcobacter butzleri RM4018 5623414 YP_001490503.1 CDS pfs NC_009850.1 1598675 1599370 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(1598675..1599370) Arcobacter butzleri RM4018 5623415 YP_001490504.1 CDS fabD NC_009850.1 1599363 1600292 R Pfam match to PF00698 Acyl_transf_1, score -7.6, E-value 1.1E-009; malonyl coenzyme A-(acyl carrier protein) transacylase complement(1599363..1600292) Arcobacter butzleri RM4018 5623416 YP_001490505.1 CDS slyD NC_009850.1 1600427 1601014 R Pfam match to PF00254 FKBP_C, score 32, E-value 1.9E-008; peptidyl-prolyl cis-trans isomerase complement(1600427..1601014) Arcobacter butzleri RM4018 5623417 YP_001490506.1 CDS Abu_1588 NC_009850.1 1601036 1601980 R hypothetical protein complement(1601036..1601980) Arcobacter butzleri RM4018 5623418 YP_001490507.1 CDS Abu_1589 NC_009850.1 1601982 1602506 R Pfam match to PF00691 OmpA, score 94.9, E-value 2.2E-025; OmpA/MotB precursor complement(1601982..1602506) Arcobacter butzleri RM4018 5623419 YP_001490508.1 CDS tolB NC_009850.1 1602667 1603959 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(1602667..1603959) Arcobacter butzleri RM4018 5623420 YP_001490509.1 CDS Abu_1591 NC_009850.1 1603964 1604695 R hypothetical protein complement(1603964..1604695) Arcobacter butzleri RM4018 5623421 YP_001490510.1 CDS exbD3 NC_009850.1 1604701 1605090 R Pfam match to PF02472 ExbD, score 39.7, E-value 9.1E-009; biopolymer transport protein ExbD complement(1604701..1605090) Arcobacter butzleri RM4018 5623422 YP_001490511.1 CDS exbB3 NC_009850.1 1605095 1605655 R Pfam match to PF01618 MotA_ExbB, score 95, E-value 2.1E-025; biopolymer transport protein ExbB complement(1605095..1605655) Arcobacter butzleri RM4018 5623423 YP_001490512.1 CDS atpC NC_009850.1 1605662 1606039 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(1605662..1606039) Arcobacter butzleri RM4018 5623424 YP_001490513.1 CDS atpD NC_009850.1 1606063 1607457 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1606063..1607457) Arcobacter butzleri RM4018 5623425 YP_001490514.1 CDS atpG NC_009850.1 1607477 1608364 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(1607477..1608364) Arcobacter butzleri RM4018 5623426 YP_001490515.1 CDS atpA NC_009850.1 1608375 1609892 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(1608375..1609892) Arcobacter butzleri RM4018 5625244 YP_001490516.1 CDS atpH NC_009850.1 1609914 1610444 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(1609914..1610444) Arcobacter butzleri RM4018 5625245 YP_001490517.1 CDS atpF NC_009850.1 1610444 1610956 R Pfam match to PF00430 ATP-synt_B, score 38.7, E-value 4E-004; ATP synthase F0 sector, subunit B complement(1610444..1610956) Arcobacter butzleri RM4018 5625246 YP_001490518.1 CDS atpF' NC_009850.1 1610970 1611392 R Pfam match to PF00430 ATP-synt_B, score 30.8, E-value 4.3E-006; ATP synthase F0 sector, B' subunit complement(1610970..1611392) Arcobacter butzleri RM4018 5625247 YP_001490519.1 CDS parB NC_009850.1 1611511 1612365 R Pfam match to PF02195 ParBc, score 115.7, E-value 1.2E-031; transcriptional regulator involved in chromosome partitioning ParB complement(1611511..1612365) Arcobacter butzleri RM4018 5625248 YP_001490520.1 CDS parA NC_009850.1 1612386 1613162 R Pfam match to PF01656 CbiA, score 189.8, E-value 6.1E-054; chromosome partitioning ATPase ParA complement(1612386..1613162) Arcobacter butzleri RM4018 5625249 YP_001490521.1 CDS birA NC_009850.1 1613159 1613794 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(1613159..1613794) Arcobacter butzleri RM4018 5625250 YP_001490522.1 CDS Abu_1604 NC_009850.1 1613888 1614589 R hypothetical protein complement(1613888..1614589) Arcobacter butzleri RM4018 5625251 YP_001490523.1 CDS Abu_1605 NC_009850.1 1614821 1615714 D Pfam match to PF03547 Auxin_eff, score 74.6, E-value 6.4E-023; auxin efflux carrier protein 1614821..1615714 Arcobacter butzleri RM4018 5625252 YP_001490524.1 CDS fmt NC_009850.1 1615719 1616639 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(1615719..1616639) Arcobacter butzleri RM4018 5625253 YP_001490525.1 CDS proB NC_009850.1 1616649 1617413 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(1616649..1617413) Arcobacter butzleri RM4018 5625254 YP_001490526.1 CDS obg NC_009850.1 1617410 1618501 R Pfam matches to PF01018 GTP1_OBG, score 257.2, E-value 3.2E-074, and to PF01926 MMR_HSR1, score 127, E-value 4.8E-035; GTP-binding protein complement(1617410..1618501) Arcobacter butzleri RM4018 5625255 YP_001490527.1 CDS rpmA NC_009850.1 1618631 1618888 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(1618631..1618888) Arcobacter butzleri RM4018 5625256 YP_001490528.1 CDS rplU NC_009850.1 1618913 1619230 R Pfam match to PF00829 Ribosomal_L21p, score 132.1, E-value 1.4E-036; 50S ribosomal protein L21 complement(1618913..1619230) Arcobacter butzleri RM4018 5624623 YP_001490529.1 CDS dnaG NC_009850.1 1619364 1620998 R Pfam matches to PF01807 zf-CHC2, score 189.2, E-value 9.2E-054, and to PF08275 Toprim_N, score 153.4, E-value 5.3E-043, and to PF01751 Toprim, score 70.8, E-value 3.9E-018; DNA primase complement(1619364..1620998) Arcobacter butzleri RM4018 5624624 YP_001490530.1 CDS Abu_1612 NC_009850.1 1621080 1622129 D hypothetical protein 1621080..1622129 Arcobacter butzleri RM4018 5624625 YP_001490531.1 CDS rnc NC_009850.1 1622177 1622851 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1622177..1622851 Arcobacter butzleri RM4018 5624626 YP_001490532.1 CDS aroC NC_009850.1 1622855 1623931 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1622855..1623931 Arcobacter butzleri RM4018 5624627 YP_001490533.1 CDS Abu_1615 NC_009850.1 1623921 1624673 D hypothetical protein 1623921..1624673 Arcobacter butzleri RM4018 5624628 YP_001490534.1 CDS Abu_1616 NC_009850.1 1624748 1625599 R Pfam match to PF01435 Peptidase_M48, score 95.8, E-value 2.7E-028; M48 family peptidase complement(1624748..1625599) Arcobacter butzleri RM4018 5624629 YP_001490535.1 CDS Abu_1617 NC_009850.1 1625653 1626339 R hypothetical protein complement(1625653..1626339) Arcobacter butzleri RM4018 5624630 YP_001490536.1 CDS Abu_1618 NC_009850.1 1626436 1626915 D Pfam match to PF00300 PGAM, score 68.6, E-value 1.9E-017; phosphoglycerate/bisphosphoglycerate mutase 1626436..1626915 Arcobacter butzleri RM4018 5624631 YP_001490537.1 CDS Abu_1619 NC_009850.1 1626931 1627344 R hypothetical protein complement(1626931..1627344) Arcobacter butzleri RM4018 5624632 YP_001490538.1 CDS trmE NC_009850.1 1627346 1628686 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(1627346..1628686) Arcobacter butzleri RM4018 5624633 YP_001490539.1 CDS Abu_1621 NC_009850.1 1628689 1629564 R hypothetical protein complement(1628689..1629564) Arcobacter butzleri RM4018 5624634 YP_001490540.1 CDS oxaA NC_009850.1 1629585 1631186 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(1629585..1631186) Arcobacter butzleri RM4018 5624635 YP_001490541.1 CDS Abu_1623 NC_009850.1 1631179 1631511 R Pfam match to PF01809 DUF37, score 80.4, E-value 5.2E-021; hypothetical protein complement(1631179..1631511) Arcobacter butzleri RM4018 5624079 YP_001490542.1 CDS rpmH NC_009850.1 1631831 1631965 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(1631831..1631965) Arcobacter butzleri RM4018 5624081 YP_001490543.1 CDS clpB NC_009850.1 1632040 1634619 R Pfam matches to PF07724 AAA_2, score 376.3, E-value 4.4E-110, and to PF00004 AAA, score 85.3, E-value 1.3E-025, and to PF02861 Clp_N, score 41.6, E-value 2.4E-009; ATP-dependent Clp protease, ATP-binding subunit complement(1632040..1634619) Arcobacter butzleri RM4018 5624082 YP_001490544.1 CDS rnhB NC_009850.1 1634738 1635316 D Pfam match to PF01351 RNase_HII, score 174, E-value 3.5E-049; ribonuclease HII 1634738..1635316 Arcobacter butzleri RM4018 5624083 YP_001490545.1 CDS Abu_1628 NC_009850.1 1635318 1635632 R Pfam match to PF01910 DUF77, score 60.8, E-value 4.2E-015; hypothetical protein complement(1635318..1635632) Arcobacter butzleri RM4018 5624084 YP_001490546.1 CDS Abu_1629 NC_009850.1 1635642 1636535 R Pfam match to PF03976 PPK2, score 383.4, E-value 3E-112; hypothetical protein complement(1635642..1636535) Arcobacter butzleri RM4018 5624085 YP_001490547.1 CDS Abu_1630 NC_009850.1 1636655 1636996 D hypothetical protein 1636655..1636996 Arcobacter butzleri RM4018 5624086 YP_001490548.1 CDS msrA NC_009850.1 1636993 1637487 R Pfam match to PF01625 PMSR, score 228.5, E-value 1.3E-065; peptide methionine sulfoxide reductase complement(1636993..1637487) Arcobacter butzleri RM4018 5624087 YP_001490549.1 CDS msrB NC_009850.1 1637490 1637849 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; a fusion protein of this enzyme with MsrA and thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase B complement(1637490..1637849) Arcobacter butzleri RM4018 5624088 YP_001490550.1 CDS Abu_1633 NC_009850.1 1637861 1638475 R Pfam match to PF01557 FAA_hydrolase, score 78.6, E-value 1.8E-020; fumarylacetoacetate (FAA) hydrolase complement(1637861..1638475) Arcobacter butzleri RM4018 5624089 YP_001490551.1 CDS Abu_1634 NC_009850.1 1638538 1638879 D Pfam match to PF06948 DUF1291, score 21.8, E-value 8.1E-007; hypothetical protein 1638538..1638879 Arcobacter butzleri RM4018 5623493 YP_001490552.1 CDS Abu_1635 NC_009850.1 1638876 1639532 R phosphohydrolase (MUTT/NUDIX family protein) complement(1638876..1639532) Arcobacter butzleri RM4018 5623494 YP_001490553.1 CDS bioA NC_009850.1 1639533 1640801 R Pfam match to PF00202 Aminotran_3, score 446.9, E-value 2.4E-131; 7,8-diaminopelargonic acid synthetase complement(1639533..1640801) Arcobacter butzleri RM4018 5623495 YP_001490554.1 CDS Abu_1637 NC_009850.1 1640849 1643446 R Pfam match to PF02518 HATPase_c, score 75, E-value 2.2E-019; two-component sensor histidine kinase complement(1640849..1643446) Arcobacter butzleri RM4018 5623496 YP_001490555.1 CDS purH NC_009850.1 1643562 1645094 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(1643562..1645094) Arcobacter butzleri RM4018 5623497 YP_001490556.1 CDS purL NC_009850.1 1645294 1647507 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II complement(1645294..1647507) Arcobacter butzleri RM4018 5623498 YP_001490557.1 CDS Abu_1640 NC_009850.1 1647572 1648543 R hypothetical protein complement(1647572..1648543) Arcobacter butzleri RM4018 5623499 YP_001490558.1 CDS Abu_1641 NC_009850.1 1648614 1649804 D Pfam match to PF01551 Peptidase_M23, score 168.6, E-value 4.4E-054; M24/M37 family peptidase 1648614..1649804 Arcobacter butzleri RM4018 5623500 YP_001490559.1 CDS folE NC_009850.1 1649846 1650418 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(1649846..1650418) Arcobacter butzleri RM4018 5623501 YP_001490560.1 CDS corA NC_009850.1 1650441 1651394 R Pfam match to PF01544 CorA, score 180.5, E-value 3.9E-051; magnesium and cobalt transport protein complement(1650441..1651394) Arcobacter butzleri RM4018 5623502 YP_001490561.1 CDS ctsF NC_009850.1 1651410 1652600 R Pfam match to PF00482 GSPII_F, score 54.4, E-value 3.3E-013; transformation system protein CtsF complement(1651410..1652600) Arcobacter butzleri RM4018 5623561 YP_001490562.1 CDS ctsE NC_009850.1 1652602 1653603 R Pfam match to PF00437 GSPII_E, score 252.2, E-value 1E-072; transformation system protein CtsE complement(1652602..1653603) Arcobacter butzleri RM4018 5623171 YP_001490563.1 CDS Abu_1646 NC_009850.1 1653875 1654447 R Pfam match to PF03692 UPF0153, score 40.4, E-value 5.7E-009; hypothetical protein complement(1653875..1654447) Arcobacter butzleri RM4018 5624090 YP_001490564.1 CDS Abu_1647 NC_009850.1 1654459 1655106 R Pfam match to PF00717 Peptidase_S24, score 40.3, E-value 6.1E-009; hypothetical protein complement(1654459..1655106) Arcobacter butzleri RM4018 5625005 YP_001490565.1 CDS Abu_1648 NC_009850.1 1655167 1655820 D hypothetical protein 1655167..1655820 Arcobacter butzleri RM4018 5625006 YP_001490566.1 CDS Abu_1649 NC_009850.1 1655848 1656423 R hypothetical protein complement(1655848..1656423) Arcobacter butzleri RM4018 5625007 YP_001490567.1 CDS Abu_1650 NC_009850.1 1656508 1657290 R Pfam match to PF02086 MethyltransfD12, score 100.5, E-value 4.6E-027; N6 adenine-specific DNA methyltransferase, D12 class complement(1656508..1657290) Arcobacter butzleri RM4018 5625008 YP_001490568.1 CDS Abu_1651 NC_009850.1 1657398 1658345 R Pfam match to PF05954 Phage_GPD, score 140.1, E-value 5.6E-039; phage tail protein D complement(1657398..1658345) Arcobacter butzleri RM4018 5625009 YP_001490569.1 CDS Abu_1652 NC_009850.1 1658339 1658545 R hypothetical protein complement(1658339..1658545) Arcobacter butzleri RM4018 5625010 YP_001490570.1 CDS Abu_1653 NC_009850.1 1658542 1658910 R hypothetical protein complement(1658542..1658910) Arcobacter butzleri RM4018 5625011 YP_001490571.1 CDS Abu_1654 NC_009850.1 1658910 1660814 R TP901 family phage tail tape measure protein complement(1658910..1660814) Arcobacter butzleri RM4018 5625012 YP_001490572.1 CDS Abu_1655 NC_009850.1 1660960 1661235 R hypothetical protein complement(1660960..1661235) Arcobacter butzleri RM4018 5625013 YP_001490573.1 CDS Abu_1656 NC_009850.1 1661249 1661740 R phage major tail tube protein complement(1661249..1661740) Arcobacter butzleri RM4018 5625014 YP_001490574.1 CDS Abu_1657 NC_009850.1 1661742 1662926 R phage tail sheath protein complement(1661742..1662926) Arcobacter butzleri RM4018 5625015 YP_001490575.1 CDS Abu_1658 NC_009850.1 1662954 1663199 R hypothetical protein complement(1662954..1663199) Arcobacter butzleri RM4018 5625016 YP_001490576.1 CDS Abu_1659 NC_009850.1 1663189 1663794 R Pfam match to PF02413 Caudo_TAP, score 20.8, E-value 6.9E-006; tail fiber assembly protein complement(1663189..1663794) Arcobacter butzleri RM4018 5625017 YP_001490577.1 CDS Abu_1660 NC_009850.1 1663807 1664916 R hypothetical protein complement(1663807..1664916) Arcobacter butzleri RM4018 5623529 YP_001490578.1 CDS Abu_1661 NC_009850.1 1664913 1665551 R tail protein I complement(1664913..1665551) Arcobacter butzleri RM4018 5623530 YP_001490579.1 CDS Abu_1662 NC_009850.1 1665523 1666698 R Pfam match to PF04865 Baseplate_J, score 79.6, E-value 9.1E-021; baseplate assembly protein J complement(1665523..1666698) Arcobacter butzleri RM4018 5623531 YP_001490580.1 CDS Abu_1663 NC_009850.1 1666695 1667012 R Pfam match to PF04965 GPW_gp25, score 26.4, E-value 1E-007; baseplate assembly protein W complement(1666695..1667012) Arcobacter butzleri RM4018 5623532 YP_001490581.1 CDS Abu_1664 NC_009850.1 1667012 1667743 R Pfam match to PF04717 Phage_base_V, score 63.3, E-value 7.1E-016; baseplate assembly protein V complement(1667012..1667743) Arcobacter butzleri RM4018 5623533 YP_001490582.1 CDS Abu_1665 NC_009850.1 1667740 1668057 R hypothetical protein complement(1667740..1668057) Arcobacter butzleri RM4018 5623534 YP_001490583.1 CDS Abu_1666 NC_009850.1 1668155 1668382 R hypothetical protein complement(1668155..1668382) Arcobacter butzleri RM4018 5623535 YP_001490584.1 CDS Abu_1667 NC_009850.1 1668375 1668701 R hypothetical protein complement(1668375..1668701) Arcobacter butzleri RM4018 5623536 YP_001490585.1 CDS Abu_1668 NC_009850.1 1668877 1669317 D hypothetical protein 1668877..1669317 Arcobacter butzleri RM4018 5623537 YP_001490586.1 CDS Abu_1669 NC_009850.1 1669310 1670110 D Mu-like prophage I protein 1669310..1670110 Arcobacter butzleri RM4018 5623538 YP_001490587.1 CDS Abu_1670 NC_009850.1 1670123 1670560 D hypothetical protein 1670123..1670560 Arcobacter butzleri RM4018 5623539 YP_001490588.1 CDS Abu_1671 NC_009850.1 1670570 1671553 D hypothetical protein 1670570..1671553 Arcobacter butzleri RM4018 5623540 YP_001490589.1 CDS Abu_1672 NC_009850.1 1671676 1672077 D hypothetical protein 1671676..1672077 Arcobacter butzleri RM4018 5623541 YP_001490590.1 CDS Abu_1673 NC_009850.1 1672077 1672583 D hypothetical protein 1672077..1672583 Arcobacter butzleri RM4018 5623725 YP_001490591.1 CDS Abu_1674 NC_009850.1 1672570 1674291 D phage uncharacterized protein 1672570..1674291 Arcobacter butzleri RM4018 5623726 YP_001490592.1 CDS Abu_1675 NC_009850.1 1674292 1675683 D Pfam match to PF06074 DUF935, score 26.3, E-value 1.5E-007; phage uncharacterized protein 1674292..1675683 Arcobacter butzleri RM4018 5623727 YP_001490593.1 CDS Abu_1676 NC_009850.1 1675676 1676851 D Pfam match to PF04233 Phage_Mu_F, score 136.8, E-value 5.2E-038; Mu-like prophage F protein 1675676..1676851 Arcobacter butzleri RM4018 5623728 YP_001490594.1 CDS Abu_1677 NC_009850.1 1676951 1677436 D Mu-like prophage G protein 1676951..1677436 Arcobacter butzleri RM4018 5623729 YP_001490595.1 CDS Abu_1678 NC_009850.1 1677428 1677703 R hypothetical protein complement(1677428..1677703) Arcobacter butzleri RM4018 5623730 YP_001490596.1 CDS Abu_1679 NC_009850.1 1677853 1679139 D hypothetical protein 1677853..1679139 Arcobacter butzleri RM4018 5623731 YP_001490597.1 CDS Abu_1680 NC_009850.1 1679284 1680456 D hypothetical protein 1679284..1680456 Arcobacter butzleri RM4018 5623732 YP_001490598.1 CDS Abu_1681 NC_009850.1 1680925 1681830 R DnaB-like helicase-like protein complement(1680925..1681830) Arcobacter butzleri RM4018 5623733 YP_001490599.1 CDS Abu_1682 NC_009850.1 1681823 1682128 R hypothetical protein complement(1681823..1682128) Arcobacter butzleri RM4018 5623734 YP_001490600.1 CDS Abu_1683 NC_009850.1 1682109 1682321 R hypothetical protein complement(1682109..1682321) Arcobacter butzleri RM4018 5623735 YP_001490601.1 CDS Abu_1684 NC_009850.1 1682691 1683281 R hypothetical protein complement(1682691..1683281) Arcobacter butzleri RM4018 5623736 YP_001490602.1 CDS Abu_1685 NC_009850.1 1683268 1683924 R phage uncharacterized protein complement(1683268..1683924) Arcobacter butzleri RM4018 5623737 YP_001490603.1 CDS Abu_1686 NC_009850.1 1683987 1684238 R hypothetical protein complement(1683987..1684238) Arcobacter butzleri RM4018 5623695 YP_001490604.1 CDS Abu_1687 NC_009850.1 1684342 1684581 R hypothetical protein complement(1684342..1684581) Arcobacter butzleri RM4018 5623696 YP_001490605.1 CDS Abu_1688 NC_009850.1 1684551 1685216 R hypothetical protein complement(1684551..1685216) Arcobacter butzleri RM4018 5623697 YP_001490606.1 CDS Abu_1689 NC_009850.1 1685206 1685904 R prophage Mu, DNA transposition protein B complement(1685206..1685904) Arcobacter butzleri RM4018 5623698 YP_001490607.1 CDS Abu_1690 NC_009850.1 1685976 1688081 R Pfam match to PF00665 rve, score 47.4, E-value 9.5E-013; prophage Mu, DNA transposition protein A complement(1685976..1688081) Arcobacter butzleri RM4018 5623699 YP_001490608.1 CDS Abu_1691 NC_009850.1 1688083 1688310 R hypothetical protein complement(1688083..1688310) Arcobacter butzleri RM4018 5623700 YP_001490609.1 CDS Abu_1692 NC_009850.1 1688706 1689383 D Pfam match to PF00717 Peptidase_S24, score 47.6, E-value 3.9E-011; phage repressor protein 1688706..1689383 Arcobacter butzleri RM4018 5623701 YP_001490610.1 CDS Abu_1693 NC_009850.1 1689400 1690149 D hypothetical protein 1689400..1690149 Arcobacter butzleri RM4018 5623702 YP_001490611.1 CDS Abu_1694 NC_009850.1 1690554 1691051 R hypothetical protein complement(1690554..1691051) Arcobacter butzleri RM4018 5623703 YP_001490612.1 CDS Abu_1695 NC_009850.1 1691032 1691910 R hypothetical protein complement(1691032..1691910) Arcobacter butzleri RM4018 5623704 YP_001490613.1 CDS era NC_009850.1 1691983 1692867 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1691983..1692867) Arcobacter butzleri RM4018 5623705 YP_001490614.1 CDS Abu_1697 NC_009850.1 1692943 1693653 R hypothetical protein complement(1692943..1693653) Arcobacter butzleri RM4018 5623706 YP_001490615.1 CDS Abu_1698 NC_009850.1 1693660 1695165 R Pfam match to PF01078 Mg_chelatase, score 348, E-value 1.5E-101; Mg chelatase-related protein complement(1693660..1695165) Arcobacter butzleri RM4018 5623707 YP_001490616.1 CDS Abu_1699 NC_009850.1 1695366 1695740 D hypothetical protein 1695366..1695740 Arcobacter butzleri RM4018 5624501 YP_001490617.1 CDS def NC_009850.1 1695745 1696260 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(1695745..1696260) Arcobacter butzleri RM4018 5624502 YP_001490618.1 CDS clpP NC_009850.1 1696269 1696853 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(1696269..1696853) Arcobacter butzleri RM4018 5624503 YP_001490619.1 CDS tig NC_009850.1 1696868 1698169 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1696868..1698169) Arcobacter butzleri RM4018 5624504 YP_001490620.1 CDS Abu_1703 NC_009850.1 1698317 1699453 R Pfam match to PF03976 PPK2, score 391, E-value 1.6E-114; hypothetical protein complement(1698317..1699453) Arcobacter butzleri RM4018 5624505 YP_001490621.1 CDS Abu_1704 NC_009850.1 1699454 1700410 R Pfam match to PF03976 PPK2, score 543.6, E-value 1.9E-160; hypothetical protein complement(1699454..1700410) Arcobacter butzleri RM4018 5624506 YP_001490622.1 CDS nspC NC_009850.1 1700434 1701579 R Pfam match to PF00278 Orn_DAP_Arg_deC, score 103.5, E-value 7.1E-029; carboxynorspermidine decarboxylase complement(1700434..1701579) Arcobacter butzleri RM4018 5624507 YP_001490623.1 CDS Abu_1706 NC_009850.1 1701583 1702785 R Pfam match to PF03435 Saccharop_dh, score 564.4, E-value 1E-166; saccharopine dehydrogenase (L-lysine-forming) complement(1701583..1702785) Arcobacter butzleri RM4018 5624508 YP_001490624.1 CDS Abu_1707 NC_009850.1 1703478 1704638 D Pfam match to PF00589 Phage_integrase, score 60.2, E-value 6E-015; phage integrase family site specific recombinase 1703478..1704638 Arcobacter butzleri RM4018 5624509 YP_001490625.1 CDS Abu_1708 NC_009850.1 1704660 1705388 D hypothetical protein 1704660..1705388 Arcobacter butzleri RM4018 5624510 YP_001490626.1 CDS Abu_1709 NC_009850.1 1705737 1705988 D hypothetical protein 1705737..1705988 Arcobacter butzleri RM4018 5624511 YP_001490627.1 CDS Abu_1710 NC_009850.1 1705912 1706658 D hypothetical protein 1705912..1706658 Arcobacter butzleri RM4018 5624512 YP_001490628.1 CDS Abu_1711 NC_009850.1 1706658 1707335 D hypothetical protein 1706658..1707335 Arcobacter butzleri RM4018 5624513 YP_001490629.1 CDS Abu_1712 NC_009850.1 1707337 1708872 D hypothetical protein 1707337..1708872 Arcobacter butzleri RM4018 5623851 YP_001490630.1 CDS Abu_1713 NC_009850.1 1708884 1709549 D hypothetical protein 1708884..1709549 Arcobacter butzleri RM4018 5623852 YP_001490631.1 CDS Abu_1714 NC_009850.1 1710030 1711844 R ATPase complement(1710030..1711844) Arcobacter butzleri RM4018 5623853 YP_001490632.1 CDS Abu_1715 NC_009850.1 1711841 1713613 R Pfam match to PF02463 SMC_N, score -68.5, E-value 1.1E-006; hypothetical protein complement(1711841..1713613) Arcobacter butzleri RM4018 5623854 YP_001490633.1 CDS hsdS NC_009850.1 1713603 1714949 R Pfam match to PF01420 Methylase_S, score 123.1, E-value 7.3E-034; Type I restriction-modification system specificity determinant complement(1713603..1714949) Arcobacter butzleri RM4018 5623855 YP_001490634.1 CDS hsdM NC_009850.1 1714946 1717261 R Pfam match to PF02384 N6_Mtase, score 52.8, E-value 9.4E-016; Type I restriction-modification system, M subunit complement(1714946..1717261) Arcobacter butzleri RM4018 5623856 YP_001490635.1 CDS Abu_1718 NC_009850.1 1717694 1718158 D Pfam match to PF00226 DnaJ, score 22.5, E-value 4.2E-006; hypothetical protein 1717694..1718158 Arcobacter butzleri RM4018 5623857 YP_001490636.1 CDS Abu_1719 NC_009850.1 1718372 1718671 R hypothetical protein complement(1718372..1718671) Arcobacter butzleri RM4018 5623858 YP_001490637.1 CDS Abu_1720 NC_009850.1 1719297 1719665 R hypothetical protein complement(1719297..1719665) Arcobacter butzleri RM4018 5623859 YP_001490638.1 CDS Abu_1721 NC_009850.1 1719679 1720416 R Pfam match to PF03734 ErfK_YbiS_YhnG, score 32.6, E-value 9.9E-007; ErfK/YbiS/YcfS/YnhG family protein complement(1719679..1720416) Arcobacter butzleri RM4018 5623860 YP_001490639.1 CDS Abu_1722 NC_009850.1 1720413 1720577 R hypothetical protein complement(1720413..1720577) Arcobacter butzleri RM4018 5623861 YP_001490640.1 CDS metC1 NC_009850.1 1720707 1721858 D Pfam match to PF01053 Cys_Met_Meta_PP, score 370.5, E-value 2.4E-108; cystathionine gamma-synthase 1720707..1721858 Arcobacter butzleri RM4018 5623862 YP_001490641.1 CDS metC2 NC_009850.1 1721860 1723356 D Pfam match to PF01053 Cys_Met_Meta_PP, score -144.4, E-value 4.7E-011; cystathionine gamma-synthase 1721860..1723356 Arcobacter butzleri RM4018 5623863 YP_001490642.1 CDS Abu_1725 NC_009850.1 1723369 1724034 R Pfam matches to PF00072 Response_reg, score 114.9, E-value 9.6E-035, and to PF00486 Trans_reg_C, score 55.8, E-value 1.3E-013; DNA-binding response regulator complement(1723369..1724034) Arcobacter butzleri RM4018 5624328 YP_001490643.1 CDS Abu_1726 NC_009850.1 1724123 1726129 D Pfam match to PF00015 MCPsignal, score 163.7, E-value 4.4E-046; methyl-accepting chemotaxis protein 1724123..1726129 Arcobacter butzleri RM4018 5624329 YP_001490644.1 CDS Abu_1727 NC_009850.1 1726149 1726742 D hypothetical protein 1726149..1726742 Arcobacter butzleri RM4018 5624330 YP_001490645.1 CDS Abu_1728 NC_009850.1 1726759 1728954 D Pfam matches to PF01966 HD, score 104.9, E-value 2.1E-028, and to PF08447 PAS_3, score 82.2, E-value 1.5E-021, and to PF00072 Response_reg, score 67, E-value 4.5E-020, and to PF08447 PAS_3, score 48.4, E-value 1E-012; response regulator receiver 1726759..1728954 Arcobacter butzleri RM4018 5624331 YP_001490646.1 CDS Abu_1729 NC_009850.1 1729094 1731208 D Pfam match to PF00015 MCPsignal, score 163.7, E-value 4.4E-046; methyl-accepting chemotaxis protein 1729094..1731208 Arcobacter butzleri RM4018 5624332 YP_001490647.1 CDS Abu_1730 NC_009850.1 1731313 1734165 D Pfam match to PF02518 HATPase_c, score 77.5, E-value 4E-020; two-component sensor histidine kinase 1731313..1734165 Arcobacter butzleri RM4018 5624333 YP_001490648.1 CDS Abu_1731 NC_009850.1 1734186 1735061 R Pfam match to PF03547 Auxin_eff, score 54, E-value 1.2E-016; auxin efflux carrier protein complement(1734186..1735061) Arcobacter butzleri RM4018 5624334 YP_001490649.1 CDS Abu_1732 NC_009850.1 1735261 1736130 R hypothetical protein complement(1735261..1736130) Arcobacter butzleri RM4018 5624335 YP_001490650.1 CDS Abu_1733 NC_009850.1 1736109 1736582 R hypothetical protein complement(1736109..1736582) Arcobacter butzleri RM4018 5624336 YP_001490651.1 CDS Abu_1734 NC_009850.1 1736582 1737907 R hypothetical protein complement(1736582..1737907) Arcobacter butzleri RM4018 5624337 YP_001490652.1 CDS Abu_1735 NC_009850.1 1737904 1739304 R cytochrome complement(1737904..1739304) Arcobacter butzleri RM4018 5624338 YP_001490653.1 CDS Abu_1736 NC_009850.1 1739386 1740051 R two-component response regulator complement(1739386..1740051) Arcobacter butzleri RM4018 5624339 YP_001490654.1 CDS Abu_1737 NC_009850.1 1740161 1740715 D Pfam match to PF00583 Acetyltransf_1, score 71.1, E-value 3.2E-018; acetyltransferase 1740161..1740715 Arcobacter butzleri RM4018 5624340 YP_001490655.1 CDS Abu_1738 NC_009850.1 1740712 1742154 R Pfam match to PF03824 NicO, score 42.1, E-value 1.8E-009; nickel transporter complement(1740712..1742154) Arcobacter butzleri RM4018 5623776 YP_001490656.1 CDS Abu_1739 NC_009850.1 1742151 1743077 R Pfam match to PF01297 SBP_bac_9, score 244.7, E-value 1.8E-070; cation ABC transporter, periplasmic-binding protein complement(1742151..1743077) Arcobacter butzleri RM4018 5623777 YP_001490657.1 CDS Abu_1740 NC_009850.1 1743200 1743574 D Pfam match to PF01475 FUR, score 34.5, E-value 5.9E-008; FUR family transcriptional regulator 1743200..1743574 Arcobacter butzleri RM4018 5623778 YP_001490658.1 CDS nhaA NC_009850.1 1743564 1744754 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1743564..1744754 Arcobacter butzleri RM4018 5623779 YP_001490659.1 CDS Abu_1742 NC_009850.1 1744767 1745903 R Pfam match to PF03150 CCP_MauG, score 169.3, E-value 8.6E-048; diheme cytochrome c peroxidase complement(1744767..1745903) Arcobacter butzleri RM4018 5623780 YP_001490660.1 CDS Abu_1743 NC_009850.1 1745903 1746808 R Pfam match to PF01598 Sterol_desat, score 29.4, E-value 7.4E-008; sterol desaturase-related protein complement(1745903..1746808) Arcobacter butzleri RM4018 5623781 YP_001490661.1 CDS Abu_1744 NC_009850.1 1746816 1747760 R hypothetical protein complement(1746816..1747760) Arcobacter butzleri RM4018 5623782 YP_001490662.1 CDS Abu_1745 NC_009850.1 1747757 1749157 R Pfam match to PF06537 DUF1111, score 480.2, E-value 2.3E-141; hypothetical protein complement(1747757..1749157) Arcobacter butzleri RM4018 5623783 YP_001490663.1 CDS Abu_1746 NC_009850.1 1749123 1750478 R hypothetical protein complement(1749123..1750478) Arcobacter butzleri RM4018 5623784 YP_001490664.1 CDS Abu_1747 NC_009850.1 1750576 1752654 R hypothetical protein complement(1750576..1752654) Arcobacter butzleri RM4018 5623785 YP_001490665.1 CDS atpE NC_009850.1 1752826 1753140 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 1752826..1753140 Arcobacter butzleri RM4018 5623786 YP_001490666.1 CDS Abu_1749 NC_009850.1 1753279 1755402 D Pfam matches to PF00015 MCPsignal, score 132, E-value 1.5E-036, and to PF02743 Cache_1, score 80.4, E-value 5.2E-021; methyl-accepting chemotaxis protein 1753279..1755402 Arcobacter butzleri RM4018 5623787 YP_001490667.1 CDS Abu_1751 NC_009850.1 1755661 1756704 R Pfam match to PF01594 UPF0118, score 158.1, E-value 2E-044; hypothetical protein complement(1755661..1756704) Arcobacter butzleri RM4018 5624114 YP_001490668.1 CDS Abu_1752 NC_009850.1 1756791 1757594 R Pfam match to PF00520 Ion_trans, score 145.1, E-value 1.7E-040; ion transport protein complement(1756791..1757594) Arcobacter butzleri RM4018 5624115 YP_001490669.1 CDS Abu_1753 NC_009850.1 1757654 1758037 R hypothetical protein complement(1757654..1758037) Arcobacter butzleri RM4018 5624116 YP_001490670.1 CDS Abu_1754 NC_009850.1 1758047 1758361 R hypothetical protein complement(1758047..1758361) Arcobacter butzleri RM4018 5624117 YP_001490671.1 CDS Abu_1755 NC_009850.1 1758647 1758865 D hypothetical protein 1758647..1758865 Arcobacter butzleri RM4018 5624118 YP_001490672.1 CDS thiD NC_009850.1 1758877 1759632 D Pfam match to PF08543 Phos_pyr_kin, score 324.9, E-value 1.3E-094; phosphomethylpyrimidine kinase 1758877..1759632 Arcobacter butzleri RM4018 5624119 YP_001490673.1 CDS proA NC_009850.1 1759707 1760945 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1759707..1760945 Arcobacter butzleri RM4018 5624120 YP_001490674.1 CDS Abu_1758 NC_009850.1 1760948 1762837 D glycosyl hydrolase 1760948..1762837 Arcobacter butzleri RM4018 5624121 YP_001490675.1 CDS Abu_1759 NC_009850.1 1762865 1763512 R hypothetical protein complement(1762865..1763512) Arcobacter butzleri RM4018 5624122 YP_001490676.1 CDS Abu_1760 NC_009850.1 1763645 1764958 D ferredoxin-like protein 1763645..1764958 Arcobacter butzleri RM4018 5624123 YP_001490677.1 CDS Abu_1761 NC_009850.1 1764960 1766279 R Pfam match to PF02518 HATPase_c, score 83.9, E-value 4.5E-022; two-component sensor histidine kinase complement(1764960..1766279) Arcobacter butzleri RM4018 5624124 YP_001490678.1 CDS Abu_1762 NC_009850.1 1766269 1766949 R Pfam match to PF00072 Response_reg, score 84.2, E-value 2.4E-025; two-component response regulator complement(1766269..1766949) Arcobacter butzleri RM4018 5624125 YP_001490679.1 CDS ogt NC_009850.1 1766992 1767510 D Pfam match to PF01035 DNA_binding_1, score 124.5, E-value 2.7E-034; methylated-DNA-protein-cysteine methyltransferase 1766992..1767510 Arcobacter butzleri RM4018 5624126 YP_001490680.1 CDS Abu_1764 NC_009850.1 1767500 1768909 D Pfam matches to PF02878 PGM_PMM_I, score 105.7, E-value 1.3E-028, and to PF02879 PGM_PMM_II, score 72, E-value 1.7E-018, and to PF02880 PGM_PMM_III, score 43.1, E-value 8.6E-010; phosphohexosemutase 1767500..1768909 Arcobacter butzleri RM4018 5625307 YP_001490681.1 CDS Abu_1765 NC_009850.1 1768884 1769609 D Pfam match to PF00795 CN_hydrolase, score 53.1, E-value 8.5E-013; nitrilase/cyanide hydratase 1768884..1769609 Arcobacter butzleri RM4018 5625308 YP_001490682.1 CDS Abu_1766 NC_009850.1 1769686 1770183 D hypothetical protein 1769686..1770183 Arcobacter butzleri RM4018 5625309 YP_001490683.1 CDS Abu_1767 NC_009850.1 1770421 1770759 D hypothetical protein 1770421..1770759 Arcobacter butzleri RM4018 5625310 YP_001490684.1 CDS Abu_1768 NC_009850.1 1770753 1771511 D hypothetical protein 1770753..1771511 Arcobacter butzleri RM4018 5625311 YP_001490685.1 CDS fldA NC_009850.1 1771524 1772021 D Pfam match to PF00258 Flavodoxin_1, score 148.3, E-value 1.9E-041; flavodoxin 1771524..1772021 Arcobacter butzleri RM4018 5625312 YP_001490686.1 CDS fur2 NC_009850.1 1772045 1772494 R Pfam match to PF01475 FUR, score 187.5, E-value 2.9E-053; ferric uptake regulation protein complement(1772045..1772494) Arcobacter butzleri RM4018 5625313 YP_001490687.1 CDS Abu_1771 NC_009850.1 1772580 1772954 R hypothetical protein complement(1772580..1772954) Arcobacter butzleri RM4018 5625314 YP_001490688.1 CDS ate NC_009850.1 1773029 1773766 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1773029..1773766) Arcobacter butzleri RM4018 5625315 YP_001490689.1 CDS trpA NC_009850.1 1773769 1774509 R Pfam match to PF00290 Trp_syntA, score 190.2, E-value 4.6E-054; tryptophan synthase, alpha chain complement(1773769..1774509) Arcobacter butzleri RM4018 5625316 YP_001490690.1 CDS Abu_1774 NC_009850.1 1774563 1775960 R Pfam match to PF00654 Voltage_CLC, score 140.3, E-value 4.8E-039; voltage-gated chloride channel family protein complement(1774563..1775960) Arcobacter butzleri RM4018 5625317 YP_001490691.1 CDS panB NC_009850.1 1776133 1776942 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1776133..1776942 Arcobacter butzleri RM4018 5625318 YP_001490692.1 CDS ruvB NC_009850.1 1776946 1777983 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1776946..1777983 Arcobacter butzleri RM4018 5625319 YP_001490693.1 CDS amaA NC_009850.1 1777980 1779026 D Pfam match to PF01594 UPF0118, score 164.2, E-value 3.1E-046; acid membrane antigen A 1777980..1779026 Arcobacter butzleri RM4018 5624857 YP_001490694.1 CDS Abu_1778 NC_009850.1 1779023 1779757 R hypothetical protein complement(1779023..1779757) Arcobacter butzleri RM4018 5624858 YP_001490695.1 CDS Abu_1785 NC_009850.1 1785709 1786635 R Pfam match to PF04055 Radical_SAM, score 52.4, E-value 1.4E-012; radical SAM domain-containing protein complement(1785709..1786635) Arcobacter butzleri RM4018 5624865 YP_001490696.1 CDS hemE NC_009850.1 1786713 1787753 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(1786713..1787753) Arcobacter butzleri RM4018 5624866 YP_001490697.1 CDS Abu_1787 NC_009850.1 1787766 1788278 R Pfam match to PF03350 UPF0114, score 146.2, E-value 8E-041; integral membrane protein complement(1787766..1788278) Arcobacter butzleri RM4018 5624867 YP_001490698.1 CDS asd NC_009850.1 1788278 1789315 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(1788278..1789315) Arcobacter butzleri RM4018 5624868 YP_001490699.1 CDS gyrA NC_009850.1 1789318 1791900 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(1789318..1791900) Arcobacter butzleri RM4018 5624869 YP_001490700.1 CDS Abu_1790 NC_009850.1 1792039 1792254 R hypothetical protein complement(1792039..1792254) Arcobacter butzleri RM4018 5624870 YP_001490701.1 CDS argJ NC_009850.1 1792338 1793519 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(1792338..1793519) Arcobacter butzleri RM4018 5624450 YP_001490702.1 CDS Abu_1792 NC_009850.1 1793521 1794648 R Pfam matches to PF02254 TrkA_N, score 50.1, E-value 7E-013, and to PF02080 TrkA_C, score 40.5, E-value 5.4E-009; potassium channel protein complement(1793521..1794648) Arcobacter butzleri RM4018 5624451 YP_001490703.1 CDS rpmB NC_009850.1 1794672 1794860 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(1794672..1794860) Arcobacter butzleri RM4018 5624452 YP_001490704.1 CDS Abu_1794 NC_009850.1 1794926 1795792 R hypothetical protein complement(1794926..1795792) Arcobacter butzleri RM4018 5624453 YP_001490705.1 CDS Abu_1795 NC_009850.1 1796039 1796407 D Possible pseudogene/truncated protein. G:A transition (Met:Ile) at bp 1795888 results in a potential start codon shift to bp 1796039. N-terminal sequence downstream of ly mutated start codon at 1795886 corresponds to N-terminal sequences of similar protein in P. haloplanktis. Good RBS present at bp 1795874-1795879.; heptose phosphatase 1796039..1796407 Arcobacter butzleri RM4018 5624454 YP_001490706.1 CDS waaD NC_009850.1 1796416 1797423 D Pfam match to PF01370 Epimerase, score 109.1, E-value 1.1E-029; ADP-L-glycero-D-manno-heptose-6-epimerase 1796416..1797423 Arcobacter butzleri RM4018 5624455 YP_001490707.1 CDS waaE NC_009850.1 1797424 1798860 D Pfam matches to PF00294 PfkB, score 126.7, E-value 5.8E-035, and to PF01467 CTP_transf_2, score 57.6, E-value 3.7E-016; ADP-heptose synthase 1797424..1798860 Arcobacter butzleri RM4018 5624456 YP_001490708.1 CDS gmhA NC_009850.1 1798841 1799410 D catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1798841..1799410 Arcobacter butzleri RM4018 5624457 YP_001490709.1 CDS Abu_1799 NC_009850.1 1799500 1801398 D Pfam match to PF00884 Sulfatase, score 128.1, E-value 2.3E-035; sulfatase 1799500..1801398 Arcobacter butzleri RM4018 5624458 YP_001490710.1 CDS waaF NC_009850.1 1801417 1802355 R Pfam match to PF01075 Glyco_transf_9, score 115.2, E-value 1.3E-032; lipopolysaccharide heptosyltransferase II complement(1801417..1802355) Arcobacter butzleri RM4018 5624459 YP_001490711.1 CDS Abu_1801 NC_009850.1 1802348 1803409 R hypothetical protein complement(1802348..1803409) Arcobacter butzleri RM4018 5624460 YP_001490712.1 CDS Abu_1802 NC_009850.1 1803402 1804322 R heptosyltransferase complement(1803402..1804322) Arcobacter butzleri RM4018 5624461 YP_001490713.1 CDS Abu_1803 NC_009850.1 1804322 1805071 R hypothetical protein complement(1804322..1805071) Arcobacter butzleri RM4018 5624462 YP_001490714.1 CDS Abu_1804 NC_009850.1 1805206 1806852 D Pfam match to PF00884 Sulfatase, score 117.6, E-value 3.3E-032; hypothetical protein 1805206..1806852 Arcobacter butzleri RM4018 5624201 YP_001490715.1 CDS Abu_1805 NC_009850.1 1806870 1807427 R hypothetical protein complement(1806870..1807427) Arcobacter butzleri RM4018 5624202 YP_001490716.1 CDS Abu_1806 NC_009850.1 1807436 1808329 R hypothetical protein complement(1807436..1808329) Arcobacter butzleri RM4018 5624203 YP_001490717.1 CDS Abu_1807 NC_009850.1 1808338 1809795 R Pfam match to PF03062 MBOAT, score 262.2, E-value 9.6E-076; acetyltransferase complement(1808338..1809795) Arcobacter butzleri RM4018 5624204 YP_001490718.1 CDS Abu_1808 NC_009850.1 1809801 1810928 R Pfam match to PF00534 Glycos_transf_1, score 153.8, E-value 4.1E-043; glycosyltransferase complement(1809801..1810928) Arcobacter butzleri RM4018 5624205 YP_001490719.1 CDS Abu_1809 NC_009850.1 1810891 1811640 R Pfam match to PF00535 Glycos_transf_2, score 49.9, E-value 1.3E-014; glycosyltransferase complement(1810891..1811640) Arcobacter butzleri RM4018 5624206 YP_001490720.1 CDS Abu_1810 NC_009850.1 1811720 1812790 D Pfam match to PF00534 Glycos_transf_1, score 88.9, E-value 3.2E-024; hypothetical protein 1811720..1812790 Arcobacter butzleri RM4018 5624207 YP_001490721.1 CDS Abu_1811 NC_009850.1 1812813 1813826 D Pfam match to PF00535 Glycos_transf_2, score 119, E-value 3.5E-035; glycosyltransferase 1812813..1813826 Arcobacter butzleri RM4018 5624208 YP_001490722.1 CDS Abu_1812 NC_009850.1 1813836 1814426 R hypothetical protein complement(1813836..1814426) Arcobacter butzleri RM4018 5624209 YP_001490723.1 CDS Abu_1813 NC_009850.1 1814423 1815547 R Pfam match to PF00534 Glycos_transf_1, score 78.6, E-value 2.4E-021; glycosyltransferase complement(1814423..1815547) Arcobacter butzleri RM4018 5624210 YP_001490724.1 CDS Abu_1814 NC_009850.1 1815544 1816881 R Pfam match to PF04932 Wzy_C, score 38, E-value 3E-008; O-antigen polymerase complement(1815544..1816881) Arcobacter butzleri RM4018 5624211 YP_001490725.1 CDS Abu_1815 NC_009850.1 1816893 1817966 R Pfam match to PF01041 DegT_DnrJ_EryC1, score 270.9, E-value 2.3E-078; aminotransferase complement(1816893..1817966) Arcobacter butzleri RM4018 5624212 YP_001490726.1 CDS Abu_1816 NC_009850.1 1817968 1818996 R Pfam match to PF01370 Epimerase, score 271.8, E-value 1.2E-078; dTDP-glucose 4,6-dehydratase complement(1817968..1818996) Arcobacter butzleri RM4018 5624213 YP_001490727.1 CDS Abu_1817 NC_009850.1 1818986 1819867 R Pfam match to PF00483 NTP_transferase, score 377.5, E-value 1.9E-110; glucose-1-phosphate thymidylyltransferase complement(1818986..1819867) Arcobacter butzleri RM4018 5624303 YP_001490728.1 CDS Abu_1818 NC_009850.1 1819867 1821870 R Pfam match to PF00884 Sulfatase, score 85.3, E-value 2.4E-023; phosphoglycerol transferase complement(1819867..1821870) Arcobacter butzleri RM4018 5624304 YP_001490729.1 CDS dgkA NC_009850.1 1821884 1822237 R Pfam match to PF01219 DAGK_prokar, score 100.7, E-value 3.9E-027; diacylglycerol kinase complement(1821884..1822237) Arcobacter butzleri RM4018 5624305 YP_001490730.1 CDS Abu_1820 NC_009850.1 1822239 1823012 R hypothetical protein complement(1822239..1823012) Arcobacter butzleri RM4018 5624306 YP_001490731.1 CDS waaM NC_009850.1 1823009 1823923 R Pfam match to PF03279 Lip_A_acyltrans, score 126.8, E-value 5.4E-035; lipid A biosynthesis lauroyl acyltransferase complement(1823009..1823923) Arcobacter butzleri RM4018 5624307 YP_001490732.1 CDS waaC NC_009850.1 1823916 1824920 R Pfam match to PF01075 Glyco_transf_9, score 139.5, E-value 1.6E-039; lipopolysaccharide heptosyltransferase I complement(1823916..1824920) Arcobacter butzleri RM4018 5624308 YP_001490733.1 CDS gppA NC_009850.1 1824917 1826386 R Pfam match to PF02541 Ppx-GppA, score 225.4, E-value 1.1E-064; guanosine pentaphosphate phosphohydrolase (gppA) complement(1824917..1826386) Arcobacter butzleri RM4018 5624309 YP_001490734.1 CDS fdxB NC_009850.1 1826386 1826640 R Pfam match to PF00037 Fer4, score 22.6, E-value 9.1E-005; ferredoxin complement(1826386..1826640) Arcobacter butzleri RM4018 5624310 YP_001490735.1 CDS Abu_1825 NC_009850.1 1826684 1827433 R Pfam match to PF00459 Inositol_P, score 31.9, E-value 1.3E-008; inositol monophosphatase complement(1826684..1827433) Arcobacter butzleri RM4018 5624311 YP_001490736.1 CDS gltD NC_009850.1 1827436 1828812 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(1827436..1828812) Arcobacter butzleri RM4018 5624312 YP_001490737.1 CDS gltB NC_009850.1 1828818 1833257 R Pfam matches to PF01645 Glu_synthase, score 688.8, E-value 3.6E-204, and to PF00310 GATase_2, score 484.4, E-value 1.2E-142, and to PF04898 Glu_syn_central, score 323.9, E-value 2.7E-094, and to PF01493 GXGXG, score 280.5, E-value 2.9E-081; glutamate synthase, large chain complement(1828818..1833257) Arcobacter butzleri RM4018 5624313 YP_001490738.1 CDS Abu_1828 NC_009850.1 1833452 1834246 R hypothetical protein complement(1833452..1834246) Arcobacter butzleri RM4018 5624314 YP_001490739.1 CDS Abu_1829 NC_009850.1 1834250 1835035 R hypothetical protein complement(1834250..1835035) Arcobacter butzleri RM4018 5624315 YP_001490740.1 CDS Abu_1830 NC_009850.1 1835231 1837615 R Pfam matches to PF00015 MCPsignal, score 152.6, E-value 9.6E-043, and to PF02743 Cache_1, score 69.3, E-value 1.1E-017; methyl-accepting chemotaxis protein complement(1835231..1837615) Arcobacter butzleri RM4018 5623172 YP_001490741.1 CDS Abu_1831 NC_009850.1 1838229 1840184 R Pfam match to PF00015 MCPsignal, score 160.5, E-value 3.9E-045; methyl-accepting chemotaxis protein complement(1838229..1840184) Arcobacter butzleri RM4018 5623173 YP_001490742.1 CDS Abu_1832 NC_009850.1 1840197 1840367 R hypothetical protein complement(1840197..1840367) Arcobacter butzleri RM4018 5623174 YP_001490743.1 CDS gspD NC_009850.1 1840718 1842154 R Pfam matches to PF00263 Secretin, score 162.6, E-value 9.2E-046, and to PF03958 Secretin_N, score 34, E-value 9.5E-009; general secretion pathway protein D complement(1840718..1842154) Arcobacter butzleri RM4018 5623175 YP_001490744.1 CDS Abu_1834 NC_009850.1 1842184 1842756 R Pfam match to PF01205 UPF0029, score 171.8, E-value 1.6E-048; hypothetical protein complement(1842184..1842756) Arcobacter butzleri RM4018 5623176 YP_001490745.1 CDS tlyA NC_009850.1 1842783 1843481 D Pfam matches to PF01479 S4, score 38, E-value 3E-008, and to PF01728 FtsJ, score -14.9, E-value 1.1E-005; hemolysin A 1842783..1843481 Arcobacter butzleri RM4018 5623177 YP_001490746.1 CDS ribF NC_009850.1 1843450 1844295 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1843450..1844295 Arcobacter butzleri RM4018 5623178 YP_001490747.1 CDS Abu_1837 NC_009850.1 1844327 1845034 D Pfam match to PF08241 Methyltransf_11, score 43.6, E-value 6E-010; methyltransferase 1844327..1845034 Arcobacter butzleri RM4018 5623179 YP_001490748.1 CDS bcp NC_009850.1 1845047 1845553 D Pfam match to PF00578 AhpC-TSA, score 14.5, E-value 8.7E-013; bacterioferritin comigratory protein, alkyl hydroperoxide reductase/thiol specific antioxidant 1845047..1845553 Arcobacter butzleri RM4018 5623180 YP_001490749.1 CDS Abu_1839 NC_009850.1 1845565 1846569 D hypothetical protein 1845565..1846569 Arcobacter butzleri RM4018 5623181 YP_001490750.1 CDS glcD NC_009850.1 1846569 1847957 D Pfam matches to PF02913 FAD-oxidase_C, score 290.5, E-value 2.9E-084, and to PF01565 FAD_binding_4, score 198.5, E-value 1.4E-056; glycolate oxidase 1846569..1847957 Arcobacter butzleri RM4018 5623182 YP_001490751.1 CDS rbn NC_009850.1 1847965 1848750 D Pfam match to PF03631 Ribonuclease_BN, score 79.6, E-value 3.3E-023; tRNA-processing ribonuclease BN 1847965..1848750 Arcobacter butzleri RM4018 5623183 YP_001490752.1 CDS Abu_1842 NC_009850.1 1848747 1849313 R hypothetical protein complement(1848747..1849313) Arcobacter butzleri RM4018 5623184 YP_001490753.1 CDS murA NC_009850.1 1849316 1850584 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(1849316..1850584) Arcobacter butzleri RM4018 5623504 YP_001490754.1 CDS Abu_1844 NC_009850.1 1850702 1851586 D Pfam match to PF00892 DUF6, score 81.6, E-value 2.2E-021; hypothetical protein 1850702..1851586 Arcobacter butzleri RM4018 5623505 YP_001490755.1 CDS kdsA NC_009850.1 1851599 1852402 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1851599..1852402 Arcobacter butzleri RM4018 5623506 YP_001490756.1 CDS ribH NC_009850.1 1852436 1852906 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1852436..1852906 Arcobacter butzleri RM4018 5623507 YP_001490757.1 CDS nusB NC_009850.1 1852909 1853304 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1852909..1853304 Arcobacter butzleri RM4018 5623508 YP_001490758.1 CDS pyrF NC_009850.1 1853306 1854004 D type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1853306..1854004 Arcobacter butzleri RM4018 5623509 YP_001490759.1 CDS Abu_1851 NC_009850.1 1854561 1855403 D Pfam match to PF00005 ABC_tran, score 109.5, E-value 8.9E-030; ABC transporter, ATP-binding protein 1854561..1855403 Arcobacter butzleri RM4018 5623512 YP_001490760.1 CDS Abu_1852 NC_009850.1 1855403 1857016 D hypothetical protein 1855403..1857016 Arcobacter butzleri RM4018 5623513 YP_001490761.1 CDS feoA NC_009850.1 1857030 1857254 D Pfam match to PF04023 FeoA, score 79, E-value 1.3E-020; ferrous iron transport protein A 1857030..1857254 Arcobacter butzleri RM4018 5623514 YP_001490762.1 CDS feoB2 NC_009850.1 1857251 1859707 D Pfam matches to PF01926 MMR_HSR1, score 126.5, E-value 6.6E-035, and to PF02421 FeoB_N, score 85.3, E-value 1.7E-022, and to PF07670 Gate, score 60.4, E-value 1.1E-015, and to PF07664 FeoB_C, score 55.5, E-value 1.7E-013, and to PF07670 Gate, score 51.5, E-value 2.7E-013; ferrous iron transport protein B 1857251..1859707 Arcobacter butzleri RM4018 5623515 YP_001490763.1 CDS Abu_1855 NC_009850.1 1859751 1860053 D hypothetical protein 1859751..1860053 Arcobacter butzleri RM4018 5623516 YP_001490764.1 CDS Abu_1856 NC_009850.1 1860074 1860565 R hypothetical protein complement(1860074..1860565) Arcobacter butzleri RM4018 5624908 YP_001490765.1 CDS Abu_1857 NC_009850.1 1860576 1862159 R hypothetical protein complement(1860576..1862159) Arcobacter butzleri RM4018 5624909 YP_001490766.1 CDS Abu_1858 NC_009850.1 1862168 1862473 R hypothetical protein complement(1862168..1862473) Arcobacter butzleri RM4018 5624910 YP_001490767.1 CDS Abu_1859 NC_009850.1 1862602 1864725 R Pfam matches to PF00122 E1-E2_ATPase, score 211.3, E-value 7.2E-064, and to PF00702 Hydrolase, score 92.9, E-value 3.8E-026, and to PF00403 HMA, score 26.9, E-value 6.5E-005; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase complement(1862602..1864725) Arcobacter butzleri RM4018 5624911 YP_001490768.1 CDS Abu_1860 NC_009850.1 1864730 1865071 R Pfam match to PF01022 HTH_5, score 58.5, E-value 2.9E-016; ArsR family transcriptional regulator complement(1864730..1865071) Arcobacter butzleri RM4018 5624912 YP_001490769.1 CDS Abu_1861 NC_009850.1 1865186 1867312 R Pfam matches to PF00593 TonB_dep_Rec, score 92, E-value 1.7E-024, and to PF07715 Plug, score 48.8, E-value 1.6E-011; TonB-dependent receptor protein complement(1865186..1867312) Arcobacter butzleri RM4018 5624913 YP_001490770.1 CDS Abu_1862 NC_009850.1 1867525 1868079 D hypothetical protein 1867525..1868079 Arcobacter butzleri RM4018 5624914 YP_001490771.1 CDS Abu_1863 NC_009850.1 1868079 1871159 D Pfam match to PF00873 ACR_tran, score 79.4, E-value 1.1E-020; AcrB/AcrD/AcrF family protein 1868079..1871159 Arcobacter butzleri RM4018 5624915 YP_001490772.1 CDS Abu_1864 NC_009850.1 1871162 1871860 D hypothetical protein 1871162..1871860 Arcobacter butzleri RM4018 5624916 YP_001490773.1 CDS Abu_1865 NC_009850.1 1871860 1873017 D hypothetical protein 1871860..1873017 Arcobacter butzleri RM4018 5624917 YP_001490774.1 CDS cspA NC_009850.1 1873224 1873442 D Pfam match to PF00313 CSD, score 104.9, E-value 2.1E-028; cold-shock protein, DNA-binding 1873224..1873442 Arcobacter butzleri RM4018 5624918 YP_001490775.1 CDS Abu_1867 NC_009850.1 1873476 1873616 D hypothetical protein 1873476..1873616 Arcobacter butzleri RM4018 5624919 YP_001490776.1 CDS Abu_1868 NC_009850.1 1873640 1874335 R Pfam matches to PF00072 Response_reg, score 90.4, E-value 3.1E-027, and to PF00486 Trans_reg_C, score 43.3, E-value 7.5E-010; two-component response regulator complement(1873640..1874335) Arcobacter butzleri RM4018 5624920 YP_001490777.1 CDS Abu_1869 NC_009850.1 1874396 1876099 D Pfam matches to PF07695 7TMR-DISM_7TM, score 62.8, E-value 1E-015, and to PF02518 HATPase_c, score 47.1, E-value 5.2E-011; two-component sensor histidine kinase 1874396..1876099 Arcobacter butzleri RM4018 5623123 YP_001490778.1 CDS Abu_1872 NC_009850.1 1876559 1878094 D hypothetical protein 1876559..1878094 Arcobacter butzleri RM4018 5623126 YP_001490779.1 CDS Abu_1873 NC_009850.1 1878625 1879419 D Pfam match to PF01051 Rep_3, score 110.7, E-value 4E-030; replication protein 1878625..1879419 Arcobacter butzleri RM4018 5623127 YP_001490780.1 CDS Abu_1874 NC_009850.1 1879442 1880161 R hypothetical protein complement(1879442..1880161) Arcobacter butzleri RM4018 5623128 YP_001490781.1 CDS Abu_1875 NC_009850.1 1880425 1881894 D hypothetical protein 1880425..1881894 Arcobacter butzleri RM4018 5623129 YP_001490782.1 CDS ahpC NC_009850.1 1882550 1883146 D Pfam match to PF00578 AhpC-TSA, score 325.3, E-value 9.9E-095; alkyl hydroperoxide reductase/ Thiol specific antioxidant 1882550..1883146 Arcobacter butzleri RM4018 5623133 YP_001490783.1 CDS trx1 NC_009850.1 1883158 1883475 D Pfam match to PF00085 Thioredoxin, score 139.3, E-value 9.7E-039; thioredoxin 1883158..1883475 Arcobacter butzleri RM4018 5623134 YP_001490784.1 CDS Abu_1881 NC_009850.1 1883528 1883815 R Pfam match to PF03795 YCII, score 46.8, E-value 6.6E-011; hypothetical protein complement(1883528..1883815) Arcobacter butzleri RM4018 5623135 YP_001490785.1 CDS Abu_1882 NC_009850.1 1883858 1884241 R hypothetical protein complement(1883858..1884241) Arcobacter butzleri RM4018 5624341 YP_001490786.1 CDS rpoC NC_009850.1 1884277 1888812 R Pfam matches to PF04997 RNA_pol_Rpb1_1, score 459.7, E-value 3.3E-135, and to PF00623 RNA_pol_Rpb1_2, score 282.5, E-value 7.3E-082, and to PF04998 RNA_pol_Rpb1_5, score 267, E-value 3.3E-077, and to PF04983 RNA_pol_Rpb1_3, score 166.3, E-value 1.3E-049, and to PF05000 RNA_pol_Rpb1_4, score 114, E-value 4E-031; DNA-directed RNA polymerase, beta' chain complement(1884277..1888812) Arcobacter butzleri RM4018 5624342 YP_001490787.1 CDS rpoB NC_009850.1 1888802 1892950 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(1888802..1892950) Arcobacter butzleri RM4018 5624343 YP_001490788.1 CDS rplL NC_009850.1 1893107 1893478 R Pfam match to PF00542 Ribosomal_L12, score 130.9, E-value 3.2E-036; 50S ribosomal protein L7/L12 complement(1893107..1893478) Arcobacter butzleri RM4018 5623718 YP_001490789.1 CDS rplJ NC_009850.1 1893530 1894018 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(1893530..1894018) Arcobacter butzleri RM4018 5623719 YP_001490790.1 CDS rplA NC_009850.1 1894179 1894877 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(1894179..1894877) Arcobacter butzleri RM4018 5623720 YP_001490791.1 CDS rplK NC_009850.1 1894953 1895378 R Pfam matches to PF03946 Ribosomal_L11_N, score 124.3, E-value 3.2E-034, and to PF00298 Ribosomal_L11, score 73.2, E-value 7.7E-019; 50S ribosomal protein L11 complement(1894953..1895378) Arcobacter butzleri RM4018 5623721 YP_001490792.1 CDS nusG NC_009850.1 1895473 1896000 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(1895473..1896000) Arcobacter butzleri RM4018 5623722 YP_001490793.1 CDS secE NC_009850.1 1896010 1896192 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(1896010..1896192) Arcobacter butzleri RM4018 5623723 YP_001490794.1 CDS rpmG NC_009850.1 1896387 1896557 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(1896387..1896557) Arcobacter butzleri RM4018 5623657 YP_001490795.1 CDS tufA NC_009850.1 1896570 1897778 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(1896570..1897778) Arcobacter butzleri RM4018 5623658 YP_001490796.1 CDS murD NC_009850.1 1898417 1899595 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(1898417..1899595) Arcobacter butzleri RM4018 5623663 YP_001490797.1 CDS mraY NC_009850.1 1899605 1900666 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1899605..1900666) Arcobacter butzleri RM4018 5623664 YP_001490798.1 CDS pgm NC_009850.1 1900736 1902211 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1900736..1902211 Arcobacter butzleri RM4018 5623665 YP_001490799.1 CDS Abu_1901 NC_009850.1 1902211 1902900 D Pfam match to PF00005 ABC_tran, score 143.7, E-value 4.4E-040; ABC transporter, ATP-binding protein 1902211..1902900 Arcobacter butzleri RM4018 5623666 YP_001490800.1 CDS pbpA NC_009850.1 1902904 1904883 D Pfam matches to PF00912 Transgly, score 281.2, E-value 1.9E-081, and to PF00905 Transpeptidase, score 115.2, E-value 1.7E-031; penicillin-binding protein 1A 1902904..1904883 Arcobacter butzleri RM4018 5623667 YP_001490801.1 CDS glnA NC_009850.1 1905094 1906521 R Pfam matches to PF00120 Gln-synt_C, score 540.9, E-value 1.2E-159, and to PF03951 Gln-synt_N, score 134.6, E-value 2.5E-037; glutamine synthetase complement(1905094..1906521) Arcobacter butzleri RM4018 5623668 YP_001490802.1 CDS hisJ NC_009850.1 1906619 1907410 R Pfam match to PF02811 PHP, score 66.9, E-value 2.2E-019; histidinol-phosphate phosphatase complement(1906619..1907410) Arcobacter butzleri RM4018 5623669 YP_001490803.1 CDS moaE NC_009850.1 1907407 1907844 R molybdopterin converting factor, subunit 2 complement(1907407..1907844) Arcobacter butzleri RM4018 5623670 YP_001490804.1 CDS moaD NC_009850.1 1907847 1908068 R Pfam match to PF02597 ThiS, score 45.3, E-value 1.9E-010; molybdopterin converting factor, subunit 1 complement(1907847..1908068) Arcobacter butzleri RM4018 5623439 YP_001490805.1 CDS Abu_1907 NC_009850.1 1908138 1908797 D Pfam match to PF02621 DUF178, score 94.1, E-value 3.8E-025; hypothetical protein 1908138..1908797 Arcobacter butzleri RM4018 5623440 YP_001490806.1 CDS uppP NC_009850.1 1908794 1909564 D Pfam match to PF02673 BacA, score 345.1, E-value 1.1E-100; UDP diphosphatase 1908794..1909564 Arcobacter butzleri RM4018 5623441 YP_001490807.1 CDS murG NC_009850.1 1909553 1910575 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(1909553..1910575) Arcobacter butzleri RM4018 5623442 YP_001490808.1 CDS pbpB NC_009850.1 1910572 1911861 R Pfam match to PF00905 Transpeptidase, score 248.9, E-value 9.6E-072; penicillin-binding protein complement(1910572..1911861) Arcobacter butzleri RM4018 5623443 YP_001490809.1 CDS ftsW NC_009850.1 1911890 1913752 D Pfam match to PF01098 FTSW_RODA_SPOVE, score 272, E-value 1.1E-078; cell division protein FtsW 1911890..1913752 Arcobacter butzleri RM4018 5623444 YP_001490810.1 CDS ppi NC_009850.1 1913773 1914279 D Pfam match to PF00160 Pro_isomerase, score 160.6, E-value 3.6E-045; peptidyl-prolyl cis-trans isomerase 1913773..1914279 Arcobacter butzleri RM4018 5623445 YP_001490811.1 CDS Abu_1919 NC_009850.1 1920621 1921127 R Pfam match to PF00034 Cytochrom_C, score 32.6, E-value 1.3E-006; cytochrome c complement(1920621..1921127) Arcobacter butzleri RM4018 5623452 YP_001490812.1 CDS clpA NC_009850.1 1921196 1923409 R Pfam matches to PF07724 AAA_2, score 284, E-value 2.6E-082, and to PF00004 AAA, score 52.3, E-value 1.3E-015, and to PF02861 Clp_N, score 32.2, E-value 1.6E-006; ATP-dependent Clp protease, ATP-binding subunit complement(1921196..1923409) Arcobacter butzleri RM4018 5625073 YP_001490813.1 CDS clpS NC_009850.1 1923411 1923710 R Pfam match to PF02617 ClpS, score 149.4, E-value 8.4E-042; ATP-dependent Clp protease adaptor protein ClpS complement(1923411..1923710) Arcobacter butzleri RM4018 5625074 YP_001490814.1 CDS bioD NC_009850.1 1923788 1924426 D dethiobiotin synthetase 1923788..1924426 Arcobacter butzleri RM4018 5625075 YP_001490815.1 CDS Abu_1923 NC_009850.1 1924443 1924607 R hypothetical protein complement(1924443..1924607) Arcobacter butzleri RM4018 5625076 YP_001490816.1 CDS Abu_1924 NC_009850.1 1924710 1925843 D hypothetical protein 1924710..1925843 Arcobacter butzleri RM4018 5625077 YP_001490817.1 CDS Abu_1925 NC_009850.1 1925860 1928379 D Pfam matches to PF00501 AMP-binding, score 380.6, E-value 2.2E-111, and to PF03328 HpcH_HpaI, score 82.5, E-value 7.9E-023; AMP-dependent synthetase and ligase 1925860..1928379 Arcobacter butzleri RM4018 5625078 YP_001490818.1 CDS Abu_1926 NC_009850.1 1928389 1929447 D Pfam match to PF01575 MaoC_dehydratas, score 27.2, E-value 1.3E-007; MaoC family protein 1928389..1929447 Arcobacter butzleri RM4018 5625079 YP_001490819.1 CDS Abu_1927 NC_009850.1 1929480 1930463 D citrate lyase 1929480..1930463 Arcobacter butzleri RM4018 5625080 YP_001490820.1 CDS fumA NC_009850.1 1930640 1932133 D Pfam matches to PF05681 Fumerase, score 485.6, E-value 5.4E-143, and to PF05683 Fumerase_C, score 326.2, E-value 5.4E-095; fumarate hydratase, class I 1930640..1932133 Arcobacter butzleri RM4018 5625081 YP_001490821.1 CDS Abu_1929 NC_009850.1 1932293 1933129 D hypothetical protein 1932293..1933129 Arcobacter butzleri RM4018 5625082 YP_001490822.1 CDS Abu_1930 NC_009850.1 1933140 1936052 R Pfam match to PF00015 MCPsignal, score 122, E-value 1.5E-033; methyl-accepting chemotaxis protein complement(1933140..1936052) Arcobacter butzleri RM4018 5625083 YP_001490823.1 CDS arsB NC_009850.1 1936233 1937483 R Pfam match to PF02040 ArsB, score 642.1, E-value 4.1E-190; arsenical pump membrane protein complement(1936233..1937483) Arcobacter butzleri RM4018 5625084 YP_001490824.1 CDS arsR NC_009850.1 1937477 1937788 R Pfam match to PF01022 HTH_5, score 43.4, E-value 7.8E-012; ArsR family transcriptional regulator complement(1937477..1937788) Arcobacter butzleri RM4018 5625085 YP_001490825.1 CDS Abu_1933 NC_009850.1 1937788 1938024 R redox-active disulfide protein complement(1937788..1938024) Arcobacter butzleri RM4018 5624701 YP_001490826.1 CDS Abu_1934 NC_009850.1 1938029 1938994 R Pfam match to PF03773 DUF318, score 246.7, E-value 4.5E-071; hypothetical protein complement(1938029..1938994) Arcobacter butzleri RM4018 5624702 YP_001490827.1 CDS arsC NC_009850.1 1938995 1939393 R Pfam match to PF01451 LMWPc, score 86.9, E-value 5.7E-023; arsenate reductase complement(1938995..1939393) Arcobacter butzleri RM4018 5624703 YP_001490828.1 CDS Abu_1936 NC_009850.1 1939502 1940110 R hypothetical protein complement(1939502..1940110) Arcobacter butzleri RM4018 5624704 YP_001490829.1 CDS Abu_1937 NC_009850.1 1940191 1941375 R Pfam match to PF07690 MFS_1, score 91.6, E-value 1.8E-025; integral membrane protein complement(1940191..1941375) Arcobacter butzleri RM4018 5624705 YP_001490830.1 CDS flhA NC_009850.1 1941409 1943520 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(1941409..1943520) Arcobacter butzleri RM4018 5624706 YP_001490831.1 CDS flgL NC_009850.1 1943540 1944670 R flagellar hook-associated protein FlgL complement(1943540..1944670) Arcobacter butzleri RM4018 5624707 YP_001490832.1 CDS fliI NC_009850.1 1944667 1945974 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(1944667..1945974) Arcobacter butzleri RM4018 5624708 YP_001490833.1 CDS pflA NC_009850.1 1945971 1947971 R TPR repeat-containing protein complement(1945971..1947971) Arcobacter butzleri RM4018 5624709 YP_001490834.1 CDS flhB NC_009850.1 1947975 1949024 R Pfam match to PF01312 Bac_export_2, score 394.4, E-value 1.6E-115; flagellar biosynthetic protein FlhB complement(1947975..1949024) Arcobacter butzleri RM4018 5624710 YP_001490835.1 CDS fliR NC_009850.1 1949036 1949785 R Pfam match to PF01311 Bac_export_1, score 72.3, E-value 1.4E-018; flagellar biosynthetic protein FliR complement(1949036..1949785) Arcobacter butzleri RM4018 5624711 YP_001490836.1 CDS Abu_1944 NC_009850.1 1949785 1951722 R hypothetical protein complement(1949785..1951722) Arcobacter butzleri RM4018 5624712 YP_001490837.1 CDS flgC NC_009850.1 1951735 1952199 R flagellar basal body rod protein FlgC complement(1951735..1952199) Arcobacter butzleri RM4018 5624713 YP_001490838.1 CDS fliE NC_009850.1 1952214 1952534 R Pfam match to PF02049 FliE, score 64.8, E-value 2.5E-016; flagellar hook-basal body protein FliE complement(1952214..1952534) Arcobacter butzleri RM4018 5623886 YP_001490839.1 CDS Abu_1947 NC_009850.1 1952547 1952930 R hypothetical protein complement(1952547..1952930) Arcobacter butzleri RM4018 5623887 YP_001490840.1 CDS Abu_1948 NC_009850.1 1952994 1953818 R Pfam match to PF01656 CbiA, score 57.4, E-value 4.2E-014; ATP-binding protein complement(1952994..1953818) Arcobacter butzleri RM4018 5623888 YP_001490841.1 CDS flhF NC_009850.1 1953821 1954972 R Pfam match to PF00448 SRP54, score 115.1, E-value 1.8E-031; flagellar biosynthesis (GTP-binding) protein FlhF complement(1953821..1954972) Arcobacter butzleri RM4018 5623889 YP_001490842.1 CDS Abu_1950 NC_009850.1 1954969 1955364 R hypothetical protein complement(1954969..1955364) Arcobacter butzleri RM4018 5623890 YP_001490843.1 CDS Abu_1951 NC_009850.1 1955348 1955725 R hypothetical protein complement(1955348..1955725) Arcobacter butzleri RM4018 5623891 YP_001490844.1 CDS Abu_1952 NC_009850.1 1955741 1956043 R hypothetical protein complement(1955741..1956043) Arcobacter butzleri RM4018 5623892 YP_001490845.1 CDS fliY NC_009850.1 1956045 1956914 R Pfam match to PF01052 SpoA, score 66.7, E-value 6.6E-017; flagellar motor switch protein FliY complement(1956045..1956914) Arcobacter butzleri RM4018 5623893 YP_001490846.1 CDS flaG NC_009850.1 1956932 1957243 R polar flagellin complement(1956932..1957243) Arcobacter butzleri RM4018 5623894 YP_001490847.1 CDS Abu_1955 NC_009850.1 1957291 1959381 R Pfam match to PF00515 TPR_1, score 28, E-value 3E-005; TPR repeat-containing protein complement(1957291..1959381) Arcobacter butzleri RM4018 5623895 YP_001490848.1 CDS Abu_1956 NC_009850.1 1959344 1959670 R hypothetical protein complement(1959344..1959670) Arcobacter butzleri RM4018 5623896 YP_001490849.1 CDS flgE1 NC_009850.1 1959724 1961895 R Pfam matches to PF06429 DUF1078, score 64.4, E-value 3.4E-016, and to PF00460 Flg_bb_rod, score 41.1, E-value 3.4E-009; flagellar hook protein FlgE complement(1959724..1961895) Arcobacter butzleri RM4018 5623897 YP_001490850.1 CDS flgE2 NC_009850.1 1961989 1963740 R Pfam matches to PF06429 DUF1078, score 50.3, E-value 6E-012, and to PF00460 Flg_bb_rod, score 28.8, E-value 1.7E-005; flagellar hook protein FlgE complement(1961989..1963740) Arcobacter butzleri RM4018 5623898 YP_001490851.1 CDS flgD NC_009850.1 1963760 1964440 R Pfam match to PF03963 FlgD, score 46.8, E-value 6.6E-011; flagellar hook assembly protein FlgD complement(1963760..1964440) Arcobacter butzleri RM4018 5624176 YP_001490852.1 CDS fliN NC_009850.1 1964452 1964739 R Pfam match to PF01052 SpoA, score 63.5, E-value 6.1E-016; flagellar motor switch protein FliN complement(1964452..1964739) Arcobacter butzleri RM4018 5624177 YP_001490853.1 CDS fliH NC_009850.1 1964789 1965514 R flagellar assembly protein FliH complement(1964789..1965514) Arcobacter butzleri RM4018 5624178 YP_001490854.1 CDS fliG NC_009850.1 1965517 1966527 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(1965517..1966527) Arcobacter butzleri RM4018 5624179 YP_001490855.1 CDS fliF NC_009850.1 1966540 1968264 R Pfam matches to PF01514 YscJ_FliF, score 116.6, E-value 6.7E-032, and to PF08345 YscJ_FliF_C, score 105.2, E-value 1.7E-028; flagellar M-ring protein FliF complement(1966540..1968264) Arcobacter butzleri RM4018 5624180 YP_001490856.1 CDS flgB NC_009850.1 1968282 1968680 R Pfam match to PF00460 Flg_bb_rod, score 29.2, E-value 9.4E-007; flagellar basal body rod protein FlgB complement(1968282..1968680) Arcobacter butzleri RM4018 5624181 YP_001490857.1 CDS flgG1 NC_009850.1 1968680 1969399 R Pfam match to PF00460 Flg_bb_rod, score 24, E-value 2.4E-005; flagellar distal rod protein FlgG complement(1968680..1969399) Arcobacter butzleri RM4018 5624182 YP_001490858.1 CDS Abu_1966 NC_009850.1 1969414 1970352 R hypothetical protein complement(1969414..1970352) Arcobacter butzleri RM4018 5624183 YP_001490859.1 CDS cheY2 NC_009850.1 1970367 1970738 R Pfam match to PF00072 Response_reg, score 138.9, E-value 4.3E-042; chemotaxis protein CheY complement(1970367..1970738) Arcobacter butzleri RM4018 5624184 YP_001490860.1 CDS flgG2 NC_009850.1 1970900 1971688 D Pfam matches to PF06429 DUF1078, score 75.9, E-value 1.2E-019, and to PF00460 Flg_bb_rod, score 56.7, E-value 6.9E-014; flagellar distal rod protein FlgG 1970900..1971688 Arcobacter butzleri RM4018 5624185 YP_001490861.1 CDS Abu_1969 NC_009850.1 1971708 1972079 D hypothetical protein 1971708..1972079 Arcobacter butzleri RM4018 5624186 YP_001490862.1 CDS Abu_1970 NC_009850.1 1972082 1973020 D hypothetical protein 1972082..1973020 Arcobacter butzleri RM4018 5624187 YP_001490863.1 CDS rimM NC_009850.1 1973017 1973553 R Pfam matches to PF01782 RimM, score 54.8, E-value 2.7E-013, and to PF05239 PRC, score 34.1, E-value 4.3E-007; 16S rRNA processing protein complement(1973017..1973553) Arcobacter butzleri RM4018 5624188 YP_001490864.1 CDS Abu_1972 NC_009850.1 1973554 1973793 R hypothetical protein complement(1973554..1973793) Arcobacter butzleri RM4018 5625018 YP_001490865.1 CDS rpsP NC_009850.1 1973807 1974034 R Pfam match to PF00886 Ribosomal_S16, score 121.7, E-value 1.9E-033; 30S ribosomal protein S16 complement(1973807..1974034) Arcobacter butzleri RM4018 5625019 YP_001490866.1 CDS ffh NC_009850.1 1974115 1975467 R Pfam matches to PF00448 SRP54, score 338.2, E-value 1.3E-098, and to PF02978 SRP_SPB, score 160.3, E-value 4.5E-045, and to PF02881 SRP54_N, score 46.6, E-value 7.9E-011; signal recognition particle protein complement(1974115..1975467) Arcobacter butzleri RM4018 5625020 YP_001490867.1 CDS Abu_1975 NC_009850.1 1975618 1976373 R Pfam match to PF00849 PseudoU_synth_2, score 111.5, E-value 2.2E-030; ribosomal large subunit pseudouridine synthase complement(1975618..1976373) Arcobacter butzleri RM4018 5625021 YP_001490868.1 CDS kdtA NC_009850.1 1976364 1977515 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(1976364..1977515) Arcobacter butzleri RM4018 5625022 YP_001490869.1 CDS Abu_1977 NC_009850.1 1977518 1978243 R Pfam match to PF02591 DUF164, score 152.1, E-value 1.4E-042; hypothetical protein complement(1977518..1978243) Arcobacter butzleri RM4018 5625023 YP_001490870.1 CDS Abu_1978 NC_009850.1 1978236 1978991 R Pfam match to PF01784 NIF3, score 193.2, E-value 5.6E-055; hypothetical protein complement(1978236..1978991) Arcobacter butzleri RM4018 5625024 YP_001490871.1 CDS glyQ NC_009850.1 1978994 1979875 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(1978994..1979875) Arcobacter butzleri RM4018 5625025 YP_001490872.1 CDS Abu_1980 NC_009850.1 1979872 1980102 R Pfam match to PF00462 Glutaredoxin, score 31.8, E-value 1.1E-008; glutaredoxin-like protein complement(1979872..1980102) Arcobacter butzleri RM4018 5625026 YP_001490873.1 CDS purE NC_009850.1 1980102 1980596 R Pfam match to PF00731 AIRC, score 214.4, E-value 2.4E-061; phosphoribosylaminoimidazole carboxylase, catalytic subunit complement(1980102..1980596) Arcobacter butzleri RM4018 5625027 YP_001490874.1 CDS Abu_1982 NC_009850.1 1980637 1981881 R hypothetical protein complement(1980637..1981881) Arcobacter butzleri RM4018 5625028 YP_001490875.1 CDS Abu_1983 NC_009850.1 1981904 1983193 R Pfam match to PF01136 Peptidase_U32, score 357.2, E-value 2.4E-104; U32 family peptidase complement(1981904..1983193) Arcobacter butzleri RM4018 5625029 YP_001490876.1 CDS Abu_1984 NC_009850.1 1983304 1985706 R Pfam matches to PF00015 MCPsignal, score 133.3, E-value 6E-037, and to PF08269 Cache_2, score 119.7, E-value 7.8E-033, and to PF00672 HAMP, score 43.1, E-value 8.8E-010; methyl-accepting chemotaxis protein complement(1983304..1985706) Arcobacter butzleri RM4018 5625030 YP_001490877.1 CDS recN NC_009850.1 1985761 1987293 R Pfam match to PF02463 SMC_N, score -52.7, E-value 7.5E-008; DNA repair protein RecN complement(1985761..1987293) Arcobacter butzleri RM4018 5625054 YP_001490878.1 CDS Abu_1986 NC_009850.1 1987297 1988163 R Pfam match to PF01513 NAD_kinase, score 232.3, E-value 9.4E-067; NAD(+) kinase complement(1987297..1988163) Arcobacter butzleri RM4018 5625055 YP_001490879.1 CDS fus NC_009850.1 1988357 1990465 R Pfam matches to PF00009 GTP_EFTU, score 377.4, E-value 2.1E-110, and to PF03764 EFG_IV, score 223.9, E-value 3.2E-064, and to PF00679 EFG_C, score 177.9, E-value 2.3E-050, and to PF03144 GTP_EFTU_D2, score 71.7, E-value 2.2E-018; translational elongation factor G complement(1988357..1990465) Arcobacter butzleri RM4018 5625056 YP_001490880.1 CDS rpsG NC_009850.1 1990475 1990942 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(1990475..1990942) Arcobacter butzleri RM4018 5625057 YP_001490881.1 CDS rpsL NC_009850.1 1990959 1991342 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(1990959..1991342) Arcobacter butzleri RM4018 5625058 YP_001490882.1 CDS Abu_1990 NC_009850.1 1991564 1992325 D Pfam match to PF00561 Abhydrolase_1, score 41.1, E-value 2.5E-011; alpha/beta hydrolase 1991564..1992325 Arcobacter butzleri RM4018 5625059 YP_001490883.1 CDS araJ NC_009850.1 1992399 1993544 D Pfam match to PF07690 MFS_1, score 161.4, E-value 2.2E-045; transport protein AraJ 1992399..1993544 Arcobacter butzleri RM4018 5625060 YP_001490884.1 CDS Abu_1992 NC_009850.1 1993587 1995650 R Pfam matches to PF00593 TonB_dep_Rec, score 110.2, E-value 5.3E-030, and to PF07715 Plug, score 92.1, E-value 1.5E-024; TonB-dependent receptor protein complement(1993587..1995650) Arcobacter butzleri RM4018 5625061 YP_001490885.1 CDS Abu_1993 NC_009850.1 1995739 1996707 R sulfonate/nitrate transport system substrate-binding protein complement(1995739..1996707) Arcobacter butzleri RM4018 5625062 YP_001490886.1 CDS Abu_1994 NC_009850.1 1996728 1997963 R Pfam match to PF05940 NnrS, score -13.7, E-value 9.1E-010; nitrite/nitric oxide reductase-related protein NnrS complement(1996728..1997963) Arcobacter butzleri RM4018 5625063 YP_001490887.1 CDS Abu_1995 NC_009850.1 1997960 1998709 R Pfam match to PF00005 ABC_tran, score 135.8, E-value 1.1E-037; ABC transporter, ATP-binding protein complement(1997960..1998709) Arcobacter butzleri RM4018 5625064 YP_001490888.1 CDS Abu_1996 NC_009850.1 1998697 1999479 R Pfam match to PF00528 BPD_transp_1, score 44.5, E-value 3.2E-010; ABC transporter, permease complement(1998697..1999479) Arcobacter butzleri RM4018 5625065 YP_001490889.1 CDS Abu_2002 NC_009850.1 2005441 2006055 R hypothetical protein complement(2005441..2006055) Arcobacter butzleri RM4018 5623818 YP_001490890.1 CDS Abu_2003 NC_009850.1 2006052 2007260 R hypothetical protein complement(2006052..2007260) Arcobacter butzleri RM4018 5623819 YP_001490891.1 CDS trpG NC_009850.1 2007268 2007837 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(2007268..2007837) Arcobacter butzleri RM4018 5623820 YP_001490892.1 CDS fbpA NC_009850.1 2007996 2009003 D Pfam match to PF01547 SBP_bac_1, score 57, E-value 5.7E-014; iron-uptake ABC transporter, periplasmic iron-binding protein 2007996..2009003 Arcobacter butzleri RM4018 5623821 YP_001490893.1 CDS fbpB NC_009850.1 2008994 2010562 D iron-uptake ABC transporter, permease 2008994..2010562 Arcobacter butzleri RM4018 5623822 YP_001490894.1 CDS Abu_2007 NC_009850.1 2010559 2011491 D Pfam match to PF00005 ABC_tran, score 208.9, E-value 1.1E-059; ABC transporter, ATP-binding protein 2010559..2011491 Arcobacter butzleri RM4018 5623823 YP_001490895.1 CDS Abu_2008 NC_009850.1 2011510 2012490 D Pfam match to PF00165 HTH_AraC, score 37.8, E-value 3.3E-008; AraC family transcriptional regulator 2011510..2012490 Arcobacter butzleri RM4018 5623824 YP_001490896.1 CDS Abu_2009 NC_009850.1 2012593 2014677 D Pfam matches to PF00593 TonB_dep_Rec, score 104.3, E-value 3.3E-028, and to PF07715 Plug, score 68.3, E-value 2.3E-017; ferrichrome-iron receptor 2012593..2014677 Arcobacter butzleri RM4018 5623825 YP_001490897.1 CDS Abu_2010 NC_009850.1 2014689 2014991 D hypothetical protein 2014689..2014991 Arcobacter butzleri RM4018 5623826 YP_001490898.1 CDS Abu_2011 NC_009850.1 2015001 2016575 D hypothetical protein 2015001..2016575 Arcobacter butzleri RM4018 5623827 YP_001490899.1 CDS Abu_2012 NC_009850.1 2016559 2017062 D hypothetical protein 2016559..2017062 Arcobacter butzleri RM4018 5624436 YP_001490900.1 CDS nirA NC_009850.1 2017087 2018673 R Pfam matches to PF01077 NIR_SIR, score 147.2, E-value 3.9E-041, and to PF03460 NIR_SIR_ferr, score 39.1, E-value 1.4E-008, and to PF01077 NIR_SIR, score 35.8, E-value 1.4E-007; ferredoxin-nitrite reductase complement(2017087..2018673) Arcobacter butzleri RM4018 5624437 YP_001490901.1 CDS Abu_2014 NC_009850.1 2018884 2019975 D hypothetical protein 2018884..2019975 Arcobacter butzleri RM4018 5624438 YP_001490902.1 CDS Abu_2015 NC_009850.1 2020004 2020231 D hypothetical protein 2020004..2020231 Arcobacter butzleri RM4018 5624439 YP_001490903.1 CDS Abu_2016 NC_009850.1 2020215 2020619 D Pfam match to PF07366 SnoaL, score 89.4, E-value 1E-023; hypothetical protein 2020215..2020619 Arcobacter butzleri RM4018 5624440 YP_001490904.1 CDS Abu_2017 NC_009850.1 2020695 2022803 D Pfam match to PF00575 S1, score 76.7, E-value 6.6E-020; S1 RNA-binding domain-containing protein 2020695..2022803 Arcobacter butzleri RM4018 5624441 YP_001490905.1 CDS Abu_2018 NC_009850.1 2022813 2023169 R hypothetical protein complement(2022813..2023169) Arcobacter butzleri RM4018 5624442 YP_001490906.1 CDS Abu_2019 NC_009850.1 2023179 2023562 R Pfam match to PF01042 Ribonuc_L-PSP, score 209, E-value 9.8E-060; hypothetical protein complement(2023179..2023562) Arcobacter butzleri RM4018 5624443 YP_001490907.1 CDS Abu_2020 NC_009850.1 2023603 2024376 R Pfam match to PF00293 NUDIX, score 62.2, E-value 1.5E-015; MutT/nudix family protein complement(2023603..2024376) Arcobacter butzleri RM4018 5624444 YP_001490908.1 CDS Abu_2021 NC_009850.1 2024389 2025267 R Pfam matches to PF06445 AraC_E_bind, score 89.9, E-value 7.2E-024, and to PF00165 HTH_AraC, score 38, E-value 3E-008; AraC family transcriptional regulator complement(2024389..2025267) Arcobacter butzleri RM4018 5624445 YP_001490909.1 CDS Abu_2022 NC_009850.1 2025397 2026509 D Pfam match to PF00155 Aminotran_1_2, score 43.6, E-value 4.7E-012; aminotransferase, classes I and II 2025397..2026509 Arcobacter butzleri RM4018 5624446 YP_001490910.1 CDS Abu_2023 NC_009850.1 2026521 2027063 R hypothetical protein complement(2026521..2027063) Arcobacter butzleri RM4018 5624447 YP_001490911.1 CDS Abu_2024 NC_009850.1 2027067 2027669 R similar to DedA; hypothetical protein complement(2027067..2027669) Arcobacter butzleri RM4018 5624448 YP_001490912.1 CDS rplS NC_009850.1 2027771 2028127 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2027771..2028127) Arcobacter butzleri RM4018 5624449 YP_001490913.1 CDS trmD NC_009850.1 2028183 2028872 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2028183..2028872) Arcobacter butzleri RM4018 5625099 YP_001490914.1 CDS Abu_2027 NC_009850.1 2028979 2029329 D hypothetical protein 2028979..2029329 Arcobacter butzleri RM4018 5625100 YP_001490915.1 CDS metE NC_009850.1 2029494 2031761 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 2029494..2031761 Arcobacter butzleri RM4018 5625101 YP_001490916.1 CDS ilvA NC_009850.1 2031867 2033072 D Pfam match to PF00291 PALP, score 266.2, E-value 6.1E-077; threonine deaminase 2031867..2033072 Arcobacter butzleri RM4018 5625102 YP_001490917.1 CDS atpB NC_009850.1 2033163 2033849 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 2033163..2033849 Arcobacter butzleri RM4018 5625103 YP_001490918.1 CDS Abu_2031 NC_009850.1 2033911 2034465 D Pfam match to PF02581 TMP-TENI, score 38.7, E-value 7.9E-013; thiamine monophosphate synthase 2033911..2034465 Arcobacter butzleri RM4018 5625104 YP_001490919.1 CDS porA NC_009850.1 2034541 2035842 R Pfam match to PF05538 Campylo_MOMP, score 58.3, E-value 3.4E-017; major outer membrane protein complement(2034541..2035842) Arcobacter butzleri RM4018 5625105 YP_001490920.1 CDS folB NC_009850.1 2036134 2036445 R Pfam match to PF02152 FolB, score 72.1, E-value 1.6E-018; dihydroneopterin aldolase complement(2036134..2036445) Arcobacter butzleri RM4018 5625106 YP_001490921.1 CDS Abu_2034 NC_009850.1 2036442 2037065 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY complement(2036442..2037065) Arcobacter butzleri RM4018 5625107 YP_001490922.1 CDS nadA NC_009850.1 2037154 2038143 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2037154..2038143 Arcobacter butzleri RM4018 5625108 YP_001490923.1 CDS nadC NC_009850.1 2038140 2038961 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 2038140..2038961 Arcobacter butzleri RM4018 5625109 YP_001490924.1 CDS Abu_2037 NC_009850.1 2039015 2040001 D Pfam matches to PF01368 DHH, score 110.4, E-value 3.3E-032, and to PF02272 DHHA1, score 38.9, E-value 1.6E-008; exopolyphosphatase-related protein 2039015..2040001 Arcobacter butzleri RM4018 5625110 YP_001490925.1 CDS Abu_2038 NC_009850.1 2039985 2041370 D Pfam match to PF01551 Peptidase_M23, score 89, E-value 1.9E-028; M24/M37 family peptidase 2039985..2041370 Arcobacter butzleri RM4018 5625111 YP_001490926.1 CDS lpxC NC_009850.1 2041374 2042279 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2041374..2042279 Arcobacter butzleri RM4018 5625112 YP_001490927.1 CDS Abu_2040 NC_009850.1 2042286 2042738 D hypothetical protein 2042286..2042738 Arcobacter butzleri RM4018 5625282 YP_001490928.1 CDS thrB NC_009850.1 2042753 2043634 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 2042753..2043634 Arcobacter butzleri RM4018 5625283 YP_001490929.1 CDS Abu_2042 NC_009850.1 2043671 2043958 D Pfam match to PF04296 DUF448, score 26.2, E-value 4.8E-007; hypothetical protein 2043671..2043958 Arcobacter butzleri RM4018 5625284 YP_001490930.1 CDS infB NC_009850.1 2043933 2046605 D Pfam matches to PF00009 GTP_EFTU, score 160.1, E-value 5.3E-045, and to PF04760 IF2_N, score 66.2, E-value 9.7E-017, and to PF03144 GTP_EFTU_D2, score 43.4, E-value 7.1E-010, and to PF04760 IF2_N, score 39.1, E-value 1.4E-008, and to PF03144 GTP_EFTU_D2, score 30.9, E-value 4.1E-006; translation initiation factor IF-2 2043933..2046605 Arcobacter butzleri RM4018 5625285 YP_001490931.1 CDS rbfA NC_009850.1 2046607 2046966 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2046607..2046966 Arcobacter butzleri RM4018 5625286 YP_001490932.1 CDS Abu_2045 NC_009850.1 2046963 2047391 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 2046963..2047391 Arcobacter butzleri RM4018 5625287 YP_001490933.1 CDS ribD NC_009850.1 2047406 2048410 D Pfam match to PF00383 dCMP_cyt_deam_1, score 117.5, E-value 3.5E-032; bifunctional riboflavin biosynthesis protein RibD 2047406..2048410 Arcobacter butzleri RM4018 5625288 YP_001490934.1 CDS efp NC_009850.1 2048422 2048982 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(2048422..2048982) Arcobacter butzleri RM4018 5625289 YP_001490935.1 CDS serA NC_009850.1 2048996 2050582 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(2048996..2050582) Arcobacter butzleri RM4018 5625290 YP_001490936.1 CDS rpsA NC_009850.1 2050593 2052245 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(2050593..2052245) Arcobacter butzleri RM4018 5625291 YP_001490937.1 CDS ispH NC_009850.1 2052312 2053151 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2052312..2053151) Arcobacter butzleri RM4018 5625292 YP_001490938.1 CDS aroA NC_009850.1 2053230 2054507 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(2053230..2054507) Arcobacter butzleri RM4018 5625293 YP_001490939.1 CDS pheT NC_009850.1 2054521 2056845 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(2054521..2056845) Arcobacter butzleri RM4018 5625294 YP_001490940.1 CDS pheS NC_009850.1 2056842 2057834 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2056842..2057834) Arcobacter butzleri RM4018 5625295 YP_001490941.1 CDS Abu_2054 NC_009850.1 2057950 2058294 D Pfam match to PF01230 HIT, score 125.2, E-value 1.7E-034; HIT family protein 2057950..2058294 Arcobacter butzleri RM4018 5625344 YP_001490942.1 CDS accA NC_009850.1 2058305 2059240 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2058305..2059240) Arcobacter butzleri RM4018 5625345 YP_001490943.1 CDS fabF NC_009850.1 2059298 2060557 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(2059298..2060557) Arcobacter butzleri RM4018 5625346 YP_001490944.1 CDS acpP NC_009850.1 2060674 2060904 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2060674..2060904) Arcobacter butzleri RM4018 5625347 YP_001490945.1 CDS fabG NC_009850.1 2061001 2061744 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(2061001..2061744) Arcobacter butzleri RM4018 5625348 YP_001490946.1 CDS Abu_2059 NC_009850.1 2061802 2062566 R radical SAM domain-containing protein complement(2061802..2062566) Arcobacter butzleri RM4018 5625349 YP_001490947.1 CDS Abu_2060 NC_009850.1 2062559 2063083 R hypothetical protein complement(2062559..2063083) Arcobacter butzleri RM4018 5625350 YP_001490948.1 CDS exsB NC_009850.1 2063080 2063766 R Pfam match to PF06508 ExsB, score 289, E-value 2.1E-085; ExsB family transcriptional regulator complement(2063080..2063766) Arcobacter butzleri RM4018 5625351 YP_001490949.1 CDS Abu_2062 NC_009850.1 2063878 2064282 D hypothetical protein 2063878..2064282 Arcobacter butzleri RM4018 5625352 YP_001490950.1 CDS Abu_2063 NC_009850.1 2064282 2064953 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2064282..2064953 Arcobacter butzleri RM4018 5625353 YP_001490951.1 CDS petC NC_009850.1 2065012 2066040 R ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit complement(2065012..2066040) Arcobacter butzleri RM4018 5625354 YP_001490952.1 CDS petB NC_009850.1 2066037 2067287 R Pfam matches to PF00033 Cytochrom_B_N, score 223, E-value 1.2E-069, and to PF00032 Cytochrom_B_C, score 37.1, E-value 5.6E-010; ubiquinol cytochrome c oxidoreductase, cytochrome b subunit complement(2066037..2067287) Arcobacter butzleri RM4018 5625355 YP_001490953.1 CDS petA NC_009850.1 2067298 2067798 R Pfam match to PF00355 Rieske, score 35.7, E-value 1.5E-007; ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit complement(2067298..2067798) Arcobacter butzleri RM4018 5625356 YP_001490954.1 CDS thrC NC_009850.1 2067956 2069437 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2067956..2069437) Arcobacter butzleri RM4018 5625357 YP_001490955.1 CDS argB NC_009850.1 2069456 2070361 R Pfam match to PF00696 AA_kinase, score 163.6, E-value 4.6E-046; acetylglutamate kinase complement(2069456..2070361) Arcobacter butzleri RM4018 5624882 YP_001490956.1 CDS Abu_2069 NC_009850.1 2070447 2073179 D Pfam match to PF00580 UvrD-helicase, score 88.5, E-value 3.1E-024; recombination protein RecB 2070447..2073179 Arcobacter butzleri RM4018 5624883 YP_001490957.1 CDS Abu_2070 NC_009850.1 2073216 2073878 D hypothetical protein 2073216..2073878 Arcobacter butzleri RM4018 5624884 YP_001490958.1 CDS prfB NC_009850.1 2073957 2075054 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 2073957..2075054 Arcobacter butzleri RM4018 5624885 YP_001490959.1 CDS Abu_2072 NC_009850.1 2075051 2075431 R hypothetical protein complement(2075051..2075431) Arcobacter butzleri RM4018 5624886 YP_001490960.1 CDS Abu_2073 NC_009850.1 2075433 2077784 R hypothetical protein complement(2075433..2077784) Arcobacter butzleri RM4018 5624887 YP_001490961.1 CDS Abu_2074 NC_009850.1 2077774 2078331 R hypothetical protein complement(2077774..2078331) Arcobacter butzleri RM4018 5624888 YP_001490962.1 CDS Abu_2075 NC_009850.1 2078335 2078964 R hypothetical protein complement(2078335..2078964) Arcobacter butzleri RM4018 5624889 YP_001490963.1 CDS Abu_2076 NC_009850.1 2078965 2079057 R hypothetical protein complement(2078965..2079057) Arcobacter butzleri RM4018 5624890 YP_001490964.1 CDS Abu_2077 NC_009850.1 2079068 2079310 R hypothetical protein complement(2079068..2079310) Arcobacter butzleri RM4018 5624891 YP_001490965.1 CDS ccoP NC_009850.1 2079312 2080202 R cytochrome c oxidase, cbb3-type, subunit III complement(2079312..2080202) Arcobacter butzleri RM4018 5624892 YP_001490966.1 CDS ccoQ NC_009850.1 2080204 2080428 R cytochrome c oxidase, cbb3-type, subunit IV complement(2080204..2080428) Arcobacter butzleri RM4018 5624893 YP_001490967.1 CDS ccoO NC_009850.1 2080439 2081104 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(2080439..2081104) Arcobacter butzleri RM4018 5624894 YP_001490968.1 CDS ccoN NC_009850.1 2081119 2082588 R CcoN; FixN; cbb3-type cytochrome c oxidase subunit I complement(2081119..2082588) Arcobacter butzleri RM4018 5624895 YP_001490969.1 CDS smpB NC_009850.1 2082750 2083226 R Pfam match to PF01668 SmpB, score 134.8, E-value 2.2E-037; tmRNA-binding protein SmpB complement(2082750..2083226) Arcobacter butzleri RM4018 5623601 YP_001490970.1 CDS ispE NC_009850.1 2083216 2083980 R catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(2083216..2083980) Arcobacter butzleri RM4018 5623602 YP_001490971.1 CDS truB NC_009850.1 2083982 2084839 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(2083982..2084839) Arcobacter butzleri RM4018 5623603 YP_001490972.1 CDS Abu_2085 NC_009850.1 2084856 2086910 R Pfam match to PF00580 UvrD-helicase, score 578.8, E-value 4.9E-171; ATP-dependent DNA helicase UvrD complement(2084856..2086910) Arcobacter butzleri RM4018 5623604 YP_001490973.1 CDS Abu_2086 NC_009850.1 2087027 2087923 D Pfam matches to PF00126 HTH_1, score 70.6, E-value 4.5E-018, and to PF03466 LysR_substrate, score 44, E-value 4.8E-010; LysR family transcriptional regulator 2087027..2087923 Arcobacter butzleri RM4018 5623605 YP_001490974.1 CDS Abu_2087 NC_009850.1 2087940 2088902 R Pfam match to PF04055 Radical_SAM, score 33.8, E-value 5.6E-007; hypothetical protein complement(2087940..2088902) Arcobacter butzleri RM4018 5623606 YP_001490975.1 CDS purF NC_009850.1 2088902 2090248 R Pfam matches to PF00310 GATase_2, score 64.7, E-value 1.2E-020, and to PF00156 Pribosyltran, score 42.6, E-value 1.2E-009; amidophosphoribosyltransferase complement(2088902..2090248) Arcobacter butzleri RM4018 5623607 YP_001490976.1 CDS dapB NC_009850.1 2090260 2091033 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2090260..2091033) Arcobacter butzleri RM4018 5623608 YP_001490977.1 CDS trxB NC_009850.1 2091047 2091976 R Pfam match to PF07992 Pyr_redox_2, score 142.8, E-value 8.4E-040; thioredoxin reductase complement(2091047..2091976) Arcobacter butzleri RM4018 5623609 YP_001490978.1 CDS trx2 NC_009850.1 2092193 2092510 R Pfam match to PF00085 Thioredoxin, score 138.1, E-value 2.1E-038; thioredoxin complement(2092193..2092510) Arcobacter butzleri RM4018 5623610 YP_001490979.1 CDS alaS NC_009850.1 2092690 2095245 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2092690..2095245 Arcobacter butzleri RM4018 5623611 YP_001490980.1 CDS Abu_2093 NC_009850.1 2095273 2095989 R Pfam match to PF04402 DUF541, score 145.8, E-value 1E-040; hypothetical protein complement(2095273..2095989) Arcobacter butzleri RM4018 5623612 YP_001490981.1 CDS Abu_2094 NC_009850.1 2096019 2097152 R Pfam match to PF07690 MFS_1, score 126.7, E-value 6.1E-035; major facilitator superfamily transporter complement(2096019..2097152) Arcobacter butzleri RM4018 5623613 YP_001490982.1 CDS Abu_2095 NC_009850.1 2097142 2097705 R hypothetical protein complement(2097142..2097705) Arcobacter butzleri RM4018 5623614 YP_001490983.1 CDS Abu_2096 NC_009850.1 2097788 2098207 D hypothetical protein 2097788..2098207 Arcobacter butzleri RM4018 5624065 YP_001490984.1 CDS Abu_2097 NC_009850.1 2098208 2099431 R Pfam matches to PF00512 HisKA, score 41.2, E-value 3.2E-009, and to PF02518 HATPase_c, score 26.2, E-value 5.5E-007, and to PF00672 HAMP, score 32.6, E-value 1.3E-006; two-component sensor histidine kinase complement(2098208..2099431) Arcobacter butzleri RM4018 5624066 YP_001490985.1 CDS Abu_2098 NC_009850.1 2099428 2100090 R Pfam matches to PF00072 Response_reg, score 90.9, E-value 2.2E-027, and to PF00486 Trans_reg_C, score 63.9, E-value 4.8E-016; two-component response regulator complement(2099428..2100090) Arcobacter butzleri RM4018 5624067 YP_001490986.1 CDS htrA NC_009850.1 2100118 2101545 R Pfam matches to PF00089 Trypsin, score 89.1, E-value 8.1E-028, and to PF00595 PDZ, score 33.4, E-value 9.7E-009; periplasmic serine protease DO; heat shock protein HtrA complement(2100118..2101545) Arcobacter butzleri RM4018 5624068 YP_001490987.1 CDS ilvD NC_009850.1 2101660 2103348 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(2101660..2103348) Arcobacter butzleri RM4018 5624069 YP_001490988.1 CDS int NC_009850.1 2104088 2105320 D Pfam match to PF00589 Phage_integrase, score 4, E-value 5.9E-005; phage integrase 2104088..2105320 Arcobacter butzleri RM4018 5624073 YP_001490989.1 CDS Abu_2105 NC_009850.1 2105749 2106120 R hypothetical protein complement(2105749..2106120) Arcobacter butzleri RM4018 5624074 YP_001490990.1 CDS Abu_2106 NC_009850.1 2106412 2106576 R hypothetical protein complement(2106412..2106576) Arcobacter butzleri RM4018 5624075 YP_001490991.1 CDS Abu_2107 NC_009850.1 2106622 2106738 R hypothetical protein complement(2106622..2106738) Arcobacter butzleri RM4018 5624076 YP_001490992.1 CDS Abu_2108 NC_009850.1 2106738 2107421 R hypothetical protein complement(2106738..2107421) Arcobacter butzleri RM4018 5624077 YP_001490993.1 CDS Abu_2109 NC_009850.1 2107584 2107907 R hypothetical protein complement(2107584..2107907) Arcobacter butzleri RM4018 5624078 YP_001490994.1 CDS Abu_2110 NC_009850.1 2107885 2108187 R hypothetical protein complement(2107885..2108187) Arcobacter butzleri RM4018 5623961 YP_001490995.1 CDS Abu_2111 NC_009850.1 2108187 2108399 R hypothetical protein complement(2108187..2108399) Arcobacter butzleri RM4018 5623962 YP_001490996.1 CDS Abu_2112 NC_009850.1 2109171 2109425 D hypothetical protein 2109171..2109425 Arcobacter butzleri RM4018 5623963 YP_001490997.1 CDS Abu_2113 NC_009850.1 2109457 2110437 R hypothetical protein complement(2109457..2110437) Arcobacter butzleri RM4018 5623964 YP_001490998.1 CDS Abu_2114 NC_009850.1 2110418 2111089 R Pfam match to PF00005 ABC_tran, score 191.9, E-value 1.4E-054; ABC transporter, ATP-binding protein complement(2110418..2111089) Arcobacter butzleri RM4018 5623965 YP_001490999.1 CDS Abu_2115 NC_009850.1 2111086 2112264 R Pfam match to PF02687 FtsX, score 41.3, E-value 3E-009; hypothetical protein complement(2111086..2112264) Arcobacter butzleri RM4018 5623966 YP_001491000.1 CDS dksA NC_009850.1 2112651 2113022 D Pfam match to PF01258 zf-dskA_traR, score 35.7, E-value 1.5E-007; DnaK suppressor protein DksA 2112651..2113022 Arcobacter butzleri RM4018 5623967 YP_001491001.1 CDS Abu_2117 NC_009850.1 2113019 2114017 D Pfam match to PF01142 TruD, score 241.5, E-value 1.6E-069; tRNA pseudouridine synthase 2113019..2114017 Arcobacter butzleri RM4018 5623968 YP_001491002.1 CDS Abu_2118 NC_009850.1 2114051 2115034 R hypothetical protein complement(2114051..2115034) Arcobacter butzleri RM4018 5623969 YP_001491003.1 CDS Abu_2119 NC_009850.1 2115044 2115622 R hypothetical protein complement(2115044..2115622) Arcobacter butzleri RM4018 5623970 YP_001491004.1 CDS ctpA NC_009850.1 2115740 2117050 D Pfam matches to PF03572 Peptidase_S41, score 262.6, E-value 7.1E-076, and to PF00595 PDZ, score 55.2, E-value 7.3E-015; carboxyl-terminal protease 2115740..2117050 Arcobacter butzleri RM4018 5623971 YP_001491005.1 CDS purC NC_009850.1 2117062 2118015 D Pfam match to PF01259 SAICAR_synt, score 73.6, E-value 5.8E-019; phosphoribosylaminoimidazole-succinocarboxamide synthase 2117062..2118015 Arcobacter butzleri RM4018 5623972 YP_001491006.1 CDS purS NC_009850.1 2118072 2118317 D Pfam match to PF02700 PurS, score 111.1, E-value 2.9E-030; phosphoribosylformylglycinamidine synthetase 2118072..2118317 Arcobacter butzleri RM4018 5623973 YP_001491007.1 CDS purQ NC_009850.1 2118319 2118990 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 2118319..2118990 Arcobacter butzleri RM4018 5623974 YP_001491008.1 CDS Abu_2124 NC_009850.1 2119019 2120089 D hypothetical protein 2119019..2120089 Arcobacter butzleri RM4018 5625067 YP_001491009.1 CDS plsC NC_009850.1 2120076 2120762 D Pfam match to PF01553 Acyltransferase, score 68.1, E-value 1.1E-018; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC 2120076..2120762 Arcobacter butzleri RM4018 5625068 YP_001491010.1 CDS crcB NC_009850.1 2120734 2121138 D Pfam match to PF02537 CRCB, score 93.5, E-value 5.7E-025; camphor resistance CrcB protein 2120734..2121138 Arcobacter butzleri RM4018 5625069 YP_001491011.1 CDS Abu_2127 NC_009850.1 2121205 2121429 D Pfam match to PF02416 MttA_Hcf106, score 71.9, E-value 1.8E-018; twin arginine-targeting protein translocase 2121205..2121429 Arcobacter butzleri RM4018 5625070 YP_001491012.1 CDS Abu_2128 NC_009850.1 2121450 2121686 D Pfam match to PF02416 MttA_Hcf106, score 75.7, E-value 1.3E-019; twin arginine-targeting protein translocase 2121450..2121686 Arcobacter butzleri RM4018 5624605 YP_001491013.1 CDS argS NC_009850.1 2121696 2123285 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2121696..2123285 Arcobacter butzleri RM4018 5624606 YP_001491014.1 CDS Abu_2130 NC_009850.1 2123300 2123626 R Pfam match to PF02410 DUF143, score 114, E-value 4E-031; hypothetical protein complement(2123300..2123626) Arcobacter butzleri RM4018 5624607 YP_001491015.1 CDS nadD NC_009850.1 2123623 2124171 R Pfam match to PF01467 CTP_transf_2, score 125.1, E-value 1.7E-035; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(2123623..2124171) Arcobacter butzleri RM4018 5624608 YP_001491016.1 CDS gapA NC_009850.1 2124262 2125257 D Pfam matches to PF02800 Gp_dh_C, score 305.1, E-value 1.2E-088, and to PF00044 Gp_dh_N, score 256.8, E-value 4.2E-074; glyceraldehyde 3-phosphate dehydrogenase A 2124262..2125257 Arcobacter butzleri RM4018 5624609 YP_001491017.1 CDS pgk NC_009850.1 2125275 2126477 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2125275..2126477 Arcobacter butzleri RM4018 5624610 YP_001491018.1 CDS tpiA NC_009850.1 2126477 2127187 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 2126477..2127187 Arcobacter butzleri RM4018 5623465 YP_001491019.1 CDS fabI NC_009850.1 2127189 2128010 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 2127189..2128010 Arcobacter butzleri RM4018 5623999 YP_001491020.1 CDS lysA NC_009850.1 2128106 2129314 D Pfam matches to PF02784 Orn_Arg_deC_N, score 256.6, E-value 6.1E-076, and to PF00278 Orn_DAP_Arg_deC, score 121.9, E-value 4.6E-034; diaminopimelate decarboxylase 2128106..2129314 Arcobacter butzleri RM4018 5624000 YP_001491021.1 CDS pheA NC_009850.1 2129326 2130405 D Pfam matches to PF00800 PDT, score 149.3, E-value 9.1E-042, and to PF01817 CM_2, score 87.3, E-value 4.2E-023, and to PF01842 ACT, score 27.3, E-value 6.3E-007; bifunctional chorismate mutase/prephenate dehydratase 2129326..2130405 Arcobacter butzleri RM4018 5624001 YP_001491022.1 CDS hisC NC_009850.1 2130417 2131520 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2130417..2131520 Arcobacter butzleri RM4018 5624002 YP_001491023.1 CDS dxs NC_009850.1 2131532 2133337 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2131532..2133337 Arcobacter butzleri RM4018 5624003 YP_001491024.1 CDS Abu_2140 NC_009850.1 2133488 2134507 D Pfam match to PF03150 CCP_MauG, score 300.9, E-value 2.2E-087; cytochrome c551 peroxidase 2133488..2134507 Arcobacter butzleri RM4018 5624004 YP_001491025.1 CDS Abu_2141 NC_009850.1 2134536 2135081 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(2134536..2135081) Arcobacter butzleri RM4018 5624005 YP_001491026.1 CDS Abu_2142 NC_009850.1 2135164 2136114 D Pfam matches to PF02558 ApbA, score 85, E-value 2E-022, and to PF08546 ApbA_C, score 76.6, E-value 7.1E-020; ketopantoate reductase 2135164..2136114 Arcobacter butzleri RM4018 5624006 YP_001491027.1 CDS Abu_2143 NC_009850.1 2136111 2137400 D hypothetical protein 2136111..2137400 Arcobacter butzleri RM4018 5624007 YP_001491028.1 CDS Abu_2144 NC_009850.1 2137459 2138046 R Pfam match to PF00877 NLPC_P60, score 136.5, E-value 6.8E-038; lipoprotein NlpC complement(2137459..2138046) Arcobacter butzleri RM4018 5624008 YP_001491029.1 CDS Abu_2145 NC_009850.1 2138121 2138774 R Pfam match to PF00027 cNMP_binding, score 57.8, E-value 3.3E-014; CRP/FNR family transcriptional regulator complement(2138121..2138774) Arcobacter butzleri RM4018 5624009 YP_001491030.1 CDS Abu_2146 NC_009850.1 2138858 2139205 D hypothetical protein 2138858..2139205 Arcobacter butzleri RM4018 5624010 YP_001491031.1 CDS ung NC_009850.1 2139206 2139853 R Pfam match to PF03167 UDG, score 215.5, E-value 1.1E-061; uracil-DNA glycosylase complement(2139206..2139853) Arcobacter butzleri RM4018 5624011 YP_001491032.1 CDS Abu_2148 NC_009850.1 2139970 2141361 R Pfam match to PF00171 Aldedh, score 471.2, E-value 1.2E-138; aldehyde dehydrogenase complement(2139970..2141361) Arcobacter butzleri RM4018 5624012 YP_001491033.1 CDS ilvB NC_009850.1 2141382 2143028 R catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase complement(2141382..2143028) Arcobacter butzleri RM4018 5624228 YP_001491034.1 CDS lemA NC_009850.1 2143265 2143855 D Pfam match to PF04011 LemA, score 304.7, E-value 1.5E-088; LemA protein 2143265..2143855 Arcobacter butzleri RM4018 5624229 YP_001491035.1 CDS Abu_2151 NC_009850.1 2143855 2144475 D Pfam match to PF04536 DUF477, score 25.1, E-value 2.8E-005; hypothetical protein 2143855..2144475 Arcobacter butzleri RM4018 5624230 YP_001491036.1 CDS Abu_2152 NC_009850.1 2144472 2145371 D Pfam match to PF04536 DUF477, score 151.3, E-value 2.4E-042; hypothetical protein 2144472..2145371 Arcobacter butzleri RM4018 5624231 YP_001491037.1 CDS gph NC_009850.1 2145340 2146011 D Pfam match to PF00702 Hydrolase, score 95.4, E-value 7.1E-027; phosphoglycolate phosphatase 2145340..2146011 Arcobacter butzleri RM4018 5624232 YP_001491038.1 CDS Abu_2154 NC_009850.1 2146100 2146537 D Pfam match to PF00210 Ferritin, score 78.5, E-value 3.1E-021; DNA-binding ferritin-like protein (Dps/NapA) 2146100..2146537 Arcobacter butzleri RM4018 5624233 YP_001491039.1 CDS Abu_2155 NC_009850.1 2146583 2148217 R hypothetical protein complement(2146583..2148217) Arcobacter butzleri RM4018 5624234 YP_001491040.1 CDS Abu_2156 NC_009850.1 2148218 2148595 R hypothetical protein complement(2148218..2148595) Arcobacter butzleri RM4018 5624235 YP_001491041.1 CDS Abu_2157 NC_009850.1 2148823 2149914 D Pfam match to PF07690 MFS_1, score 132, E-value 9.7E-037; major facilitator superfamily transporter 2148823..2149914 Arcobacter butzleri RM4018 5624236 YP_001491042.1 CDS Abu_2158 NC_009850.1 2149922 2150278 R hypothetical protein complement(2149922..2150278) Arcobacter butzleri RM4018 5624237 YP_001491043.1 CDS Abu_2159 NC_009850.1 2150374 2152119 D Pfam matches to PF00990 GGDEF, score 210.7, E-value 3E-060, and to PF00672 HAMP, score 26.7, E-value 7.5E-005; GGDEF/HAMP domain-containing protein 2150374..2152119 Arcobacter butzleri RM4018 5624238 YP_001491044.1 CDS Abu_2160 NC_009850.1 2152186 2153322 D Pfam match to PF00529 HlyD, score 162.7, E-value 8.6E-046; HlyD family multidrug efflux protein 2152186..2153322 Arcobacter butzleri RM4018 5624239 YP_001491045.1 CDS Abu_2161 NC_009850.1 2153326 2156451 D AcrB/AcrD/AcrF family multidrug efflux protein 2153326..2156451 Arcobacter butzleri RM4018 5624240 YP_001491046.1 CDS Abu_2162 NC_009850.1 2156444 2157844 D Pfam match to PF02321 OEP, score 146.9, E-value 4.8E-041; RND efflux system, outer membrane lipoprotein 2156444..2157844 Arcobacter butzleri RM4018 5624241 YP_001491047.1 CDS Abu_2163 NC_009850.1 2157975 2160305 R Pfam matches to PF00593 TonB_dep_Rec, score 67, E-value 5.4E-017, and to PF07660 STN, score 38.4, E-value 2.3E-008, and to PF07715 Plug, score 37.1, E-value 5.6E-008; TonB-dependent receptor protein complement(2157975..2160305) Arcobacter butzleri RM4018 5624475 YP_001491048.1 CDS Abu_2164 NC_009850.1 2160457 2161413 R Pfam match to PF04773 FecR, score 92.8, E-value 9.4E-025; sigma factor regulatory protein FecR/PupR family complement(2160457..2161413) Arcobacter butzleri RM4018 5624476 YP_001491049.1 CDS Abu_2165 NC_009850.1 2161403 2161882 R Pfam matches to PF08281 Sigma70_r4_2, score 62.6, E-value 1.7E-017, and to PF04542 Sigma70_r2, score 40.8, E-value 4.4E-009; ECF subfamily RNA polymerase sigma factor complement(2161403..2161882) Arcobacter butzleri RM4018 5624477 YP_001491050.1 CDS Abu_2166 NC_009850.1 2162024 2163133 R hypothetical protein complement(2162024..2163133) Arcobacter butzleri RM4018 5624478 YP_001491051.1 CDS Abu_2167 NC_009850.1 2163133 2164362 R Pfam match to PF03486 HI0933_like, score 351.2, E-value 1.5E-102; HI0933-like protein complement(2163133..2164362) Arcobacter butzleri RM4018 5624479 YP_001491052.1 CDS Abu_2168 NC_009850.1 2164373 2164690 R hypothetical protein complement(2164373..2164690) Arcobacter butzleri RM4018 5624480 YP_001491053.1 CDS metY NC_009850.1 2164898 2166169 D Pfam match to PF01053 Cys_Met_Meta_PP, score 560.2, E-value 2E-165; O-acetylhomoserine sulfhydrylase 2164898..2166169 Arcobacter butzleri RM4018 5624481 YP_001491054.1 CDS iscR NC_009850.1 2166176 2166589 D Pfam match to PF02082 Rrf2, score 123.9, E-value 2.1E-037; BadM/Rrf2 family transcriptional regulator 2166176..2166589 Arcobacter butzleri RM4018 5624482 YP_001491055.1 CDS cysK1 NC_009850.1 2166620 2167552 D Pfam match to PF00291 PALP, score 420.1, E-value 2.8E-123; cysteine synthase 2166620..2167552 Arcobacter butzleri RM4018 5624483 YP_001491056.1 CDS Abu_2172 NC_009850.1 2167586 2167816 D hypothetical protein 2167586..2167816 Arcobacter butzleri RM4018 5624484 YP_001491057.1 CDS cysH NC_009850.1 2167825 2168529 D Pfam match to PF01507 PAPS_reduct, score 210.2, E-value 4.5E-060; phosphoadenosine phosphosulfate reductase 2167825..2168529 Arcobacter butzleri RM4018 5624485 YP_001491058.1 CDS cysD NC_009850.1 2168546 2169457 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2168546..2169457 Arcobacter butzleri RM4018 5624486 YP_001491059.1 CDS cysNC NC_009850.1 2169459 2170868 D Pfam matches to PF00009 GTP_EFTU, score 249.9, E-value 4.9E-072, and to PF03144 GTP_EFTU_D2, score 35.6, E-value 1.6E-007; bifunctional ATP sulfurylase, subunit 1/adenylyl-sulfate kinase 2169459..2170868 Arcobacter butzleri RM4018 5624487 YP_001491060.1 CDS cysI NC_009850.1 2170878 2171969 D Pfam match to PF01077 NIR_SIR, score 49.1, E-value 1.4E-011; sulfite reductase, iron-sulfur subunit 2170878..2171969 Arcobacter butzleri RM4018 5624488 YP_001491061.1 CDS Abu_2177 NC_009850.1 2171982 2173280 D hypothetical protein 2171982..2173280 Arcobacter butzleri RM4018 5625370 YP_001491062.1 CDS Abu_2178 NC_009850.1 2173366 2174667 D Pfam match to PF00266 Aminotran_5, score 96.1, E-value 9.6E-026; aminotransferase, NifS-like protein 2173366..2174667 Arcobacter butzleri RM4018 5625371 YP_001491063.1 CDS Abu_2179 NC_009850.1 2174711 2180311 R Pfam match to PF00092 VWA, score 47.8, E-value 1.1E-014; hypothetical protein complement(2174711..2180311) Arcobacter butzleri RM4018 5625372 YP_001491064.1 CDS Abu_2180 NC_009850.1 2180415 2181020 R hypothetical protein complement(2180415..2181020) Arcobacter butzleri RM4018 5625373 YP_001491065.1 CDS cobS NC_009850.1 2181020 2181766 R Pfam match to PF02654 CobS, score -10.6, E-value 2.3E-008; cobalamin (vitamin B12) synthase complement(2181020..2181766) Arcobacter butzleri RM4018 5625374 YP_001491066.1 CDS cobP NC_009850.1 2181763 2182257 R bifunctional cobinamide kinase / cobinamide phosphate guanylyltransferase complement(2181763..2182257) Arcobacter butzleri RM4018 5625375 YP_001491067.1 CDS Abu_2183 NC_009850.1 2182285 2182947 R Pfam match to PF00657 Lipase_GDSL, score 66.8, E-value 6.4E-017; lipolytic protein complement(2182285..2182947) Arcobacter butzleri RM4018 5625376 YP_001491068.1 CDS Abu_2184 NC_009850.1 2182949 2184016 R Pfam match to PF02277 DBI_PRT, score -33, E-value 1.1E-008; hypothetical protein complement(2182949..2184016) Arcobacter butzleri RM4018 5625377 YP_001491069.1 CDS Abu_2185 NC_009850.1 2184155 2185561 D Pfam match to PF00939 Na_sulph_symp, score 612.5, E-value 3.4E-181; sodium:sulfate symporter family protein 2184155..2185561 Arcobacter butzleri RM4018 5625378 YP_001491070.1 CDS Abu_2186 NC_009850.1 2185591 2186337 R Pfam match to PF01925 DUF81, score 23.6, E-value 7.6E-007; hypothetical protein complement(2185591..2186337) Arcobacter butzleri RM4018 5625379 YP_001491071.1 CDS dsbD NC_009850.1 2186381 2188138 R Pfam matches to PF02683 DsbD, score 40.6, E-value 4.8E-009, and to PF00085 Thioredoxin, score 18.8, E-value 4.4E-006; thiol:disulfide interchange protein DsbD complement(2186381..2188138) Arcobacter butzleri RM4018 5625380 YP_001491072.1 CDS rimK NC_009850.1 2188138 2189067 R Pfam match to PF08443 RimK, score 283.6, E-value 3.5E-082; ribosomal protein S6 modification protein complement(2188138..2189067) Arcobacter butzleri RM4018 5625381 YP_001491073.1 CDS Abu_2189 NC_009850.1 2189079 2189501 R Pfam match to PF05618 DUF785, score 56.6, E-value 7.3E-014; hypothetical protein complement(2189079..2189501) Arcobacter butzleri RM4018 5625382 YP_001491074.1 CDS Abu_2190 NC_009850.1 2189551 2189775 R hypothetical protein complement(2189551..2189775) Arcobacter butzleri RM4018 5625383 YP_001491075.1 CDS Abu_2191 NC_009850.1 2189837 2191207 R Pfam matches to PF00563 EAL, score 199, E-value 1E-056, and to PF00990 GGDEF, score 13.2, E-value 4.6E-008; EAL/GGDEF domain-containing protein complement(2189837..2191207) Arcobacter butzleri RM4018 5625268 YP_001491076.1 CDS psd NC_009850.1 2191182 2191985 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(2191182..2191985) Arcobacter butzleri RM4018 5625269 YP_001491077.1 CDS Abu_2193 NC_009850.1 2192091 2192333 D hypothetical protein 2192091..2192333 Arcobacter butzleri RM4018 5625270 YP_001491078.1 CDS mltA NC_009850.1 2192344 2193432 R Pfam matches to PF03562 MltA, score 243.2, E-value 4.9E-070, and to PF06725 3D, score 102.7, E-value 1E-027; peptidoglycan N-acetylmuramoylhydrolase complement(2192344..2193432) Arcobacter butzleri RM4018 5625271 YP_001491079.1 CDS dnaK NC_009850.1 2193495 2195381 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(2193495..2195381) Arcobacter butzleri RM4018 5625272 YP_001491080.1 CDS grpE NC_009850.1 2195570 2196127 R Pfam match to PF01025 GrpE, score 212, E-value 1.2E-060; heat shock protein GrpE complement(2195570..2196127) Arcobacter butzleri RM4018 5625273 YP_001491081.1 CDS hrcA NC_009850.1 2196137 2196928 R heat shock regulator complement(2196137..2196928) Arcobacter butzleri RM4018 5625274 YP_001491082.1 CDS Abu_2198 NC_009850.1 2197044 2197685 R hypothetical protein complement(2197044..2197685) Arcobacter butzleri RM4018 5625275 YP_001491083.1 CDS truA NC_009850.1 2197689 2198411 R Pfam match to PF01416 PseudoU_synth_1, score 77.3, E-value 4.3E-020; tRNA pseudouridine synthase A complement(2197689..2198411) Arcobacter butzleri RM4018 5625276 YP_001491084.1 CDS Abu_2200 NC_009850.1 2198418 2199434 R Pfam match to PF03739 YjgP_YjgQ, score 135.4, E-value 1.5E-037; hypothetical protein complement(2198418..2199434) Arcobacter butzleri RM4018 5625277 YP_001491085.1 CDS Abu_2201 NC_009850.1 2199434 2200027 R Pfam match to PF01478 Peptidase_A24, score 46.9, E-value 6.3E-011; A24 family peptidase complement(2199434..2200027) Arcobacter butzleri RM4018 5625278 YP_001491086.1 CDS uppS NC_009850.1 2199987 2200691 R catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase complement(2199987..2200691) Arcobacter butzleri RM4018 5625279 YP_001491087.1 CDS dfp NC_009850.1 2200678 2201901 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(2200678..2201901) Arcobacter butzleri RM4018 5625280 YP_001491088.1 CDS glmU NC_009850.1 2201904 2203202 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(2201904..2203202) Arcobacter butzleri RM4018 5625281 YP_001491089.1 CDS Abu_2205 NC_009850.1 2203205 2205142 R Pfam match to PF00023 Ank, score 27.5, E-value 1.1E-006; ankyrin repeat-containing protein complement(2203205..2205142) Arcobacter butzleri RM4018 5623479 YP_001491090.1 CDS Abu_2206 NC_009850.1 2205184 2206818 R Pfam match to PF00271 Helicase_C, score 62.5, E-value 1.7E-020; ATP-dependent RNA helicase complement(2205184..2206818) Arcobacter butzleri RM4018 5623480 YP_001491091.1 CDS trmA NC_009850.1 2206842 2207969 D catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 2206842..2207969 Arcobacter butzleri RM4018 5623481 YP_001491092.1 CDS Abu_2208 NC_009850.1 2207980 2208561 R Pfam match to PF00293 NUDIX, score 53.6, E-value 5.9E-013; hypothetical protein complement(2207980..2208561) Arcobacter butzleri RM4018 5623482 YP_001491093.1 CDS gidA NC_009850.1 2209876 2211753 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(2209876..2211753) Arcobacter butzleri RM4018 5623484 YP_001491094.1 CDS ribE NC_009850.1 2211898 2212509 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2211898..2212509 Arcobacter butzleri RM4018 5623485 YP_001491095.1 CDS mreC NC_009850.1 2212503 2213309 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(2212503..2213309) Arcobacter butzleri RM4018 5623486 YP_001491096.1 CDS mreB NC_009850.1 2213314 2214357 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(2213314..2214357) Arcobacter butzleri RM4018 5623487 YP_001491097.1 CDS clpX NC_009850.1 2214361 2215584 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(2214361..2215584) Arcobacter butzleri RM4018 5623488 YP_001491098.1 CDS lpxA NC_009850.1 2215595 2216377 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(2215595..2216377) Arcobacter butzleri RM4018 5623489 YP_001491099.1 CDS fabZ NC_009850.1 2216387 2216830 R Pfam match to PF07977 FabA, score 192.8, E-value 7.6E-055; (3R)-hydroxymyristoyl-ACP dehydratase complement(2216387..2216830) Arcobacter butzleri RM4018 5623490 YP_001491100.1 CDS lpxB NC_009850.1 2216928 2217971 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(2216928..2217971) Arcobacter butzleri RM4018 5623491 YP_001491101.1 CDS Abu_2218 NC_009850.1 2217968 2219041 R Pfam match to PF02677 DUF208, score 307.8, E-value 1.8E-089; hypothetical protein complement(2217968..2219041) Arcobacter butzleri RM4018 5623492 YP_001491102.1 CDS Abu_2219 NC_009850.1 2219226 2219501 D hypothetical protein 2219226..2219501 Arcobacter butzleri RM4018 5624025 YP_001491103.1 CDS ndh NC_009850.1 2219510 2220712 R Pfam match to PF07992 Pyr_redox_2, score 76.7, E-value 6.5E-020; NADH dehydrogenase complement(2219510..2220712) Arcobacter butzleri RM4018 5624026 YP_001491104.1 CDS nfo NC_009850.1 2220918 2221760 D Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 2220918..2221760 Arcobacter butzleri RM4018 5624027 YP_001491105.1 CDS Abu_2222 NC_009850.1 2221775 2223163 R Pfam match to PF02321 OEP, score 144.3, E-value 3E-040; outer membrane efflux lipoprotein complement(2221775..2223163) Arcobacter butzleri RM4018 5624028 YP_001491106.1 CDS Abu_2223 NC_009850.1 2223156 2226323 R Acr family multidrug efflux protein complement(2223156..2226323) Arcobacter butzleri RM4018 5624029 YP_001491107.1 CDS Abu_2224 NC_009850.1 2226320 2227474 R Pfam match to PF00529 HlyD, score 123, E-value 7.8E-034; HlyD family multidrug efflux protein complement(2226320..2227474) Arcobacter butzleri RM4018 5624030 YP_001491108.1 CDS Abu_2225 NC_009850.1 2227583 2228122 D Pfam match to PF00440 TetR_N, score 26, E-value 9.2E-007; TetR family transcriptional regulator 2227583..2228122 Arcobacter butzleri RM4018 5624031 YP_001491109.1 CDS Abu_2226 NC_009850.1 2228197 2229387 D Pfam match to PF07690 MFS_1, score 156.6, E-value 5.9E-044; major facilitator transporter 2228197..2229387 Arcobacter butzleri RM4018 5624032 YP_001491110.1 CDS Abu_2227 NC_009850.1 2229392 2231017 R Pfam matches to PF00916 Sulfate_transp, score 245.1, E-value 1.4E-070, and to PF01740 STAS, score 64.3, E-value 3E-018; sulfate permease complement(2229392..2231017) Arcobacter butzleri RM4018 5624033 YP_001491111.1 CDS Abu_2228 NC_009850.1 2231076 2231723 R hypothetical protein complement(2231076..2231723) Arcobacter butzleri RM4018 5624034 YP_001491112.1 CDS Abu_2229 NC_009850.1 2231724 2232347 R hypothetical protein complement(2231724..2232347) Arcobacter butzleri RM4018 5624035 YP_001491113.1 CDS Abu_2230 NC_009850.1 2232419 2232817 D hypothetical protein 2232419..2232817 Arcobacter butzleri RM4018 5624036 YP_001491114.1 CDS Abu_2231 NC_009850.1 2232814 2234547 D Pfam match to PF00004 AAA, score 121.7, E-value 1.3E-036; AAA ATPase 2232814..2234547 Arcobacter butzleri RM4018 5624037 YP_001491115.1 CDS Abu_2232 NC_009850.1 2234557 2235348 D hypothetical protein 2234557..2235348 Arcobacter butzleri RM4018 5624038 YP_001491116.1 CDS Abu_2233 NC_009850.1 2235352 2236221 D Pfam match to PF02642 DUF191, score 413.9, E-value 2.1E-121; hypothetical protein 2235352..2236221 Arcobacter butzleri RM4018 5624737 YP_001491117.1 CDS murB NC_009850.1 2236218 2237000 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2236218..2237000 Arcobacter butzleri RM4018 5624738 YP_001491118.1 CDS topA NC_009850.1 2237216 2239486 D Pfam matches to PF01131 Topoisom_bac, score 546.6, E-value 2.4E-161, and to PF01751 Toprim, score 126.9, E-value 5E-035; DNA topoisomerase I 2237216..2239486 Arcobacter butzleri RM4018 5624739 YP_001491119.1 CDS Abu_2236 NC_009850.1 2239486 2239998 D Pfam match to PF00149 Metallophos, score 45.3, E-value 1.9E-010; hypothetical protein 2239486..2239998 Arcobacter butzleri RM4018 5624740 YP_001491120.1 CDS bioB NC_009850.1 2239988 2240836 D catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 2239988..2240836 Arcobacter butzleri RM4018 5624741 YP_001491121.1 CDS Abu_2238 NC_009850.1 2240859 2241569 R hypothetical protein complement(2240859..2241569) Arcobacter butzleri RM4018 5624742 YP_001491122.1 CDS Abu_2239 NC_009850.1 2241566 2241811 R hypothetical protein complement(2241566..2241811) Arcobacter butzleri RM4018 5624743 YP_001491123.1 CDS eno NC_009850.1 2241815 2243095 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2241815..2243095) Arcobacter butzleri RM4018 5624744 YP_001491124.1 CDS recA NC_009850.1 2243216 2244265 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2243216..2244265) Arcobacter butzleri RM4018 5624745 YP_001491125.1 CDS Abu_2242 NC_009850.1 2244366 2244560 R hypothetical protein complement(2244366..2244560) Arcobacter butzleri RM4018 5624746 YP_001491126.1 CDS pseB NC_009850.1 2244685 2245677 D Pfam match to PF02719 Polysacc_synt_2, score 540, E-value 2.3E-159; UDP GlcNAc dehydratase/reductase PseB 2244685..2245677 Arcobacter butzleri RM4018 5624747 YP_001491127.1 CDS Abu_2244 NC_009850.1 2245674 2246804 D Pfam match to PF01041 DegT_DnrJ_EryC1, score 371.6, E-value 1.1E-108; DegT/DnrJ/EryC1/StrS aminotransferase 2245674..2246804 Arcobacter butzleri RM4018 5624748 YP_001491128.1 CDS neuA NC_009850.1 2246797 2247495 D Pfam match to PF02348 CTP_transf_3, score 138.9, E-value 2.6E-039; acylneuraminate cytidylyltransferase 2246797..2247495 Arcobacter butzleri RM4018 5624749 YP_001491129.1 CDS neuB NC_009850.1 2247492 2248517 D Pfam matches to PF03102 NeuB, score 419.9, E-value 3.3E-123, and to PF01354 Antifreeze, score 52.3, E-value 1.4E-012; N-acetylneuraminic acid synthetase 2247492..2248517 Arcobacter butzleri RM4018 5624750 YP_001491130.1 CDS Abu_2247 NC_009850.1 2248514 2249536 D glycosyltransferase 2248514..2249536 Arcobacter butzleri RM4018 5624039 YP_001491131.1 CDS Abu_2248 NC_009850.1 2249523 2250386 D hypothetical protein 2249523..2250386 Arcobacter butzleri RM4018 5624040 YP_001491132.1 CDS flmE NC_009850.1 2250389 2251054 D flagellin modification protein FlmE 2250389..2251054 Arcobacter butzleri RM4018 5624041 YP_001491133.1 CDS Abu_2250 NC_009850.1 2251036 2252157 D Pfam match to PF02222 ATP-grasp, score 26.3, E-value 5.8E-008; ATP-grasp domain-containing protein 2251036..2252157 Arcobacter butzleri RM4018 5624042 YP_001491134.1 CDS Abu_2251 NC_009850.1 2252154 2253026 D Pfam match to PF04991 LicD, score 23.1, E-value 3.7E-007; hypothetical protein 2252154..2253026 Arcobacter butzleri RM4018 5624043 YP_001491135.1 CDS Abu_2252 NC_009850.1 2253047 2253667 D hypothetical protein 2253047..2253667 Arcobacter butzleri RM4018 5624044 YP_001491136.1 CDS Abu_2253 NC_009850.1 2253682 2255712 D Pfam match to PF01973 DUF115, score 50.6, E-value 4.7E-012; hypothetical protein 2253682..2255712 Arcobacter butzleri RM4018 5624045 YP_001491137.1 CDS flaA NC_009850.1 2255759 2256682 R Pfam matches to PF00669 Flagellin_N, score 135.7, E-value 1.2E-037, and to PF00700 Flagellin_C, score 95.3, E-value 1.7E-025; flagellin complement(2255759..2256682) Arcobacter butzleri RM4018 5624046 YP_001491138.1 CDS flaB NC_009850.1 2256842 2257765 R Pfam matches to PF00669 Flagellin_N, score 135.5, E-value 1.4E-037, and to PF00700 Flagellin_C, score 85.6, E-value 1.4E-022; flagellin complement(2256842..2257765) Arcobacter butzleri RM4018 5624047 YP_001491139.1 CDS Abu_2256 NC_009850.1 2258098 2259480 D 4Fe-4S ferredoxin, iron-sulfur binding 2258098..2259480 Arcobacter butzleri RM4018 5624048 YP_001491140.1 CDS pyrG NC_009850.1 2259594 2261210 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2259594..2261210 Arcobacter butzleri RM4018 5624049 YP_001491141.1 CDS recJ NC_009850.1 2261210 2262778 D Pfam matches to PF01368 DHH, score 166.2, E-value 1.4E-048, and to PF02272 DHHA1, score 74.8, E-value 2.6E-019; single-stranded DNA-specific exonuclease 2261210..2262778 Arcobacter butzleri RM4018 5624050 YP_001491142.1 CDS Abu_2259 NC_009850.1 2262773 2263375 R hypothetical protein complement(2262773..2263375) Arcobacter butzleri RM4018 5624051 YP_001491143.1 CDS Abu_2260 NC_009850.1 2263380 2264009 R hypothetical protein complement(2263380..2264009) Arcobacter butzleri RM4018 5624052 YP_001491144.1 CDS thiJ NC_009850.1 2264130 2264669 D Pfam match to PF01965 DJ-1_PfpI, score 124, E-value 3.8E-034; 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein ThiJ 2264130..2264669 Arcobacter butzleri RM4018 5624647 YP_001491145.1 CDS dnaE NC_009850.1 2264743 2268306 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 2264743..2268306 Arcobacter butzleri RM4018 5624648 YP_001491146.1 CDS surE NC_009850.1 2268281 2269069 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 2268281..2269069 Arcobacter butzleri RM4018 5624649 YP_001491147.1 CDS Abu_2264 NC_009850.1 2269087 2269356 D hypothetical protein 2269087..2269356 Arcobacter butzleri RM4018 5624650 YP_001491148.1 CDS Abu_2265 NC_009850.1 2269366 2269629 R hypothetical protein complement(2269366..2269629) Arcobacter butzleri RM4018 5624651 YP_001491149.1 CDS moaC NC_009850.1 2269632 2270102 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(2269632..2270102) Arcobacter butzleri RM4018 5624652 YP_001491150.1 CDS rpsU NC_009850.1 2270208 2270429 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2270208..2270429 Arcobacter butzleri RM4018 5624653 YP_001491151.1 CDS Abu_2273 NC_009850.1 2276717 2277418 D Pfam match to PF01027 UPF0005, score 135.4, E-value 1.5E-037; hypothetical protein 2276717..2277418 Arcobacter butzleri RM4018 5624659 YP_001491152.1 CDS Abu_2274 NC_009850.1 2277452 2277859 D hypothetical protein 2277452..2277859 Arcobacter butzleri RM4018 5624660 YP_001491153.1 CDS Abu_2275 NC_009850.1 2277811 2278503 R Pfam match to PF08242 Methyltransf_12, score 29.1, E-value 1.4E-005; methyltransferase complement(2277811..2278503) Arcobacter butzleri RM4018 5624214 YP_001491154.1 CDS secG NC_009850.1 2278590 2278937 D Pfam match to PF03840 SecG, score 93.5, E-value 5.9E-025; protein-export membrane protein SecG 2278590..2278937 Arcobacter butzleri RM4018 5624215 YP_001491155.1 CDS frr NC_009850.1 2278998 2279555 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2278998..2279555 Arcobacter butzleri RM4018 5624216 YP_001491156.1 CDS pyrE NC_009850.1 2279552 2280166 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 2279552..2280166 Arcobacter butzleri RM4018 5624217 YP_001491157.1 CDS Abu_2279 NC_009850.1 2280166 2280645 D Pfam match to PF06271 RDD, score 72.7, E-value 1.1E-018; hypothetical protein 2280166..2280645 Arcobacter butzleri RM4018 5624218 YP_001491158.1 CDS Abu_2280 NC_009850.1 2280645 2281727 D major facilitator transporter 2280645..2281727 Arcobacter butzleri RM4018 5624219 YP_001491159.1 CDS Abu_2281 NC_009850.1 2281724 2282689 R Pfam match to PF01544 CorA, score -12.3, E-value 1.1E-005; CorA-like Mg2+ transporter protein complement(2281724..2282689) Arcobacter butzleri RM4018 5624220 YP_001491160.1 CDS Abu_2282 NC_009850.1 2282700 2283437 R Pfam match to PF03883 DUF328, score 173.5, E-value 5E-049; hypothetical protein complement(2282700..2283437) Arcobacter butzleri RM4018 5624221 YP_001491161.1 CDS Abu_2283 NC_009850.1 2283521 2283892 R Pfam match to PF00633 HHH, score 36.2, E-value 7.2E-010; competence protein ComEA complement(2283521..2283892) Arcobacter butzleri RM4018 5624222 YP_001491162.1 CDS Abu_2284 NC_009850.1 2283959 2284741 R hypothetical protein complement(2283959..2284741) Arcobacter butzleri RM4018 5624223 YP_001491163.1 CDS Abu_2285 NC_009850.1 2284914 2286032 D Pfam match to PF00149 Metallophos, score 73.5, E-value 6.1E-019; metallophosphoesterase 2284914..2286032 Arcobacter butzleri RM4018 5624224 YP_001491164.1 CDS Abu_2286 NC_009850.1 2286088 2286981 R hypothetical protein complement(2286088..2286981) Arcobacter butzleri RM4018 5624225 YP_001491165.1 CDS Abu_2287 NC_009850.1 2287006 2289111 R Pfam matches to PF00593 TonB_dep_Rec, score 74.4, E-value 3.2E-019, and to PF07715 Plug, score 62.8, E-value 1E-015; TonB-dependent receptor protein complement(2287006..2289111) Arcobacter butzleri RM4018 5624226 YP_001491166.1 CDS Abu_2288 NC_009850.1 2289208 2290170 D Pfam match to PF00165 HTH_AraC, score 35.3, E-value 2E-007; AraC family transcriptional regulator 2289208..2290170 Arcobacter butzleri RM4018 5624227 YP_001491167.1 CDS Abu_2289 NC_009850.1 2290174 2290587 R Pfam match to PF00011 HSP20, score 105.8, E-value 1.2E-028; heat shock protein Hsp20 complement(2290174..2290587) Arcobacter butzleri RM4018 5623065 YP_001491168.1 CDS Abu_2290 NC_009850.1 2290749 2291189 R hypothetical protein complement(2290749..2291189) Arcobacter butzleri RM4018 5623066 YP_001491169.1 CDS Abu_2291 NC_009850.1 2291286 2293646 R Pfam match to PF00015 MCPsignal, score 158.4, E-value 1.7E-044; methyl-accepting chemotaxis protein complement(2291286..2293646) Arcobacter butzleri RM4018 5623067 YP_001491170.1 CDS moeB NC_009850.1 2293840 2294982 R Pfam matches to PF00899 ThiF, score 243.6, E-value 3.7E-070, and to PF05237 MoeZ_MoeB, score 182.4, E-value 1E-051, and to PF00581 Rhodanese, score 70.9, E-value 3.8E-018; molybdopterin biosynthesis protein complement(2293840..2294982) Arcobacter butzleri RM4018 5623068 YP_001491171.1 CDS Abu_2293 NC_009850.1 2295191 2298559 D Pfam matches to PF08379 Bact_transglu_N, score 120.2, E-value 5.5E-033, and to PF01841 Transglut_core, score 82.6, E-value 1.1E-021; hypothetical protein 2295191..2298559 Arcobacter butzleri RM4018 5623069 YP_001491172.1 CDS Abu_2294 NC_009850.1 2298560 2301049 D Pfam matches to PF04169 DUF404, score 358.8, E-value 8E-105, and to PF04174 DUF407, score 146.9, E-value 5E-041, and to PF04168 DUF403, score -73.3, E-value 6.3E-008; hypothetical protein 2298560..2301049 Arcobacter butzleri RM4018 5623070 YP_001491173.1 CDS Abu_2295 NC_009850.1 2301052 2301939 D Pfam matches to PF01841 Transglut_core, score 67.6, E-value 3.8E-017, and to PF08379 Bact_transglu_N, score 67.4, E-value 4.2E-017; hypothetical protein 2301052..2301939 Arcobacter butzleri RM4018 5623071 YP_001491174.1 CDS cysA NC_009850.1 2301952 2302998 R Pfam match to PF00005 ABC_tran, score 245.5, E-value 1.1E-070; sulfate ABC transporter ATP-binding protein complement(2301952..2302998) Arcobacter butzleri RM4018 5623072 YP_001491175.1 CDS cysW NC_009850.1 2303014 2303874 R Pfam match to PF00528 BPD_transp_1, score 68.2, E-value 2.3E-017; sulfate transport system permease complement(2303014..2303874) Arcobacter butzleri RM4018 5623073 YP_001491176.1 CDS cysT NC_009850.1 2303871 2304725 R Pfam match to PF00528 BPD_transp_1, score 129.8, E-value 6.8E-036; sulfate transport system permease complement(2303871..2304725) Arcobacter butzleri RM4018 5623074 YP_001491177.1 CDS cysK2 NC_009850.1 2304917 2305849 R Pfam match to PF00291 PALP, score 420.1, E-value 2.8E-123; cysteine synthase complement(2304917..2305849) Arcobacter butzleri RM4018 5623075 YP_001491178.1 CDS Abu_2300 NC_009850.1 2305865 2307088 R Pfam match to PF00563 EAL, score 195.9, E-value 8.7E-056; EAL domain-containing protein complement(2305865..2307088) Arcobacter butzleri RM4018 5623076 YP_001491179.1 CDS Abu_2301 NC_009850.1 2307195 2307464 R hypothetical protein complement(2307195..2307464) Arcobacter butzleri RM4018 5623077 YP_001491180.1 CDS sbp NC_009850.1 2307496 2308575 R Pfam match to PF01547 SBP_bac_1, score 32.1, E-value 1.8E-006; sulfate-binding protein precursor complement(2307496..2308575) Arcobacter butzleri RM4018 5623078 YP_001491181.1 CDS Abu_2303 NC_009850.1 2308850 2309308 R Pfam match to PF02082 Rrf2, score 144.8, E-value 9E-044; BadM/Rrf2 family transcriptional regulator complement(2308850..2309308) Arcobacter butzleri RM4018 5623388 YP_001491182.1 CDS Abu_2304 NC_009850.1 2309400 2310332 R succinylglutamate desuccinylase/aspartoacylase complement(2309400..2310332) Arcobacter butzleri RM4018 5623389 YP_001491183.1 CDS Abu_2305 NC_009850.1 2310319 2311278 R Pfam match to PF04952 AstE_AspA, score 55.4, E-value 1.7E-013; succinylglutamate desuccinylase/aspartoacylase complement(2310319..2311278) Arcobacter butzleri RM4018 5623390 YP_001491184.1 CDS Abu_2306 NC_009850.1 2311275 2311943 R hypothetical protein complement(2311275..2311943) Arcobacter butzleri RM4018 5623391 YP_001491185.1 CDS Abu_2307 NC_009850.1 2311945 2313309 R Pfam matches to PF04169 DUF404, score 263, E-value 5.4E-076, and to PF04174 DUF407, score 149.8, E-value 6.6E-042; hypothetical protein complement(2311945..2313309) Arcobacter butzleri RM4018 5623392 YP_001491186.1 CDS typA NC_009850.1 2313528 2315342 R Pfam matches to PF00009 GTP_EFTU, score 240.6, E-value 3E-069, and to PF00679 EFG_C, score 89.3, E-value 1.1E-023, and to PF03144 GTP_EFTU_D2, score 52.6, E-value 1.2E-012; GTP-binding elongation factor family protein complement(2313528..2315342) Arcobacter butzleri RM4018 5623393 YP_001491187.1 CDS Abu_2309 NC_009850.1 2315612 2316808 D Pfam match to PF04143 DUF395, score 80.3, E-value 5.4E-021; inner membrane protein 2315612..2316808 Arcobacter butzleri RM4018 5623394 YP_001491188.1 CDS Abu_2310 NC_009850.1 2316819 2317058 D Pfam match to PF01206 SirA, score 131, E-value 3E-036; hypothetical protein 2316819..2317058 Arcobacter butzleri RM4018 5623395 YP_001491189.1 CDS Abu_2311 NC_009850.1 2317080 2317568 R hypothetical protein complement(2317080..2317568) Arcobacter butzleri RM4018 5623396 YP_001491190.1 CDS Abu_2312 NC_009850.1 2317578 2317883 R hypothetical protein complement(2317578..2317883) Arcobacter butzleri RM4018 5623397 YP_001491191.1 CDS Abu_2313 NC_009850.1 2317880 2319466 R hypothetical protein complement(2317880..2319466) Arcobacter butzleri RM4018 5623398 YP_001491192.1 CDS Abu_2314 NC_009850.1 2319516 2321864 R Pfam matches to PF00593 TonB_dep_Rec, score 83.9, E-value 4.7E-022, and to PF07715 Plug, score 74.4, E-value 3.4E-019, and to PF07660 STN, score 21, E-value 1.4E-005; TonB-dependent receptor protein complement(2319516..2321864) Arcobacter butzleri RM4018 5623399 YP_001491193.1 CDS Abu_2315 NC_009850.1 2321963 2322910 R Pfam match to PF04773 FecR, score 73.9, E-value 4.6E-019; sigma factor regulatory protein FecR/PupR family complement(2321963..2322910) Arcobacter butzleri RM4018 5623400 YP_001491194.1 CDS Abu_2316 NC_009850.1 2322900 2323379 R Pfam matches to PF08281 Sigma70_r4_2, score 59.8, E-value 1.1E-016, and to PF04542 Sigma70_r2, score 26.7, E-value 7.4E-005; ECF subfamily RNA polymerase sigma factor complement(2322900..2323379) Arcobacter butzleri RM4018 5623401 YP_001491195.1 CDS Abu_2317 NC_009850.1 2323547 2326915 D Pfam matches to PF00990 GGDEF, score 164.3, E-value 4.5E-047, and to PF08447 PAS_3, score 101.3, E-value 2.7E-027; GGDEF/PAS domain-containing protein 2323547..2326915 Arcobacter butzleri RM4018 5623305 YP_001491196.1 CDS Abu_2318 NC_009850.1 2326992 2328617 D Pfam matches to PF00884 Sulfatase, score 205.8, E-value 9.1E-059, and to PF08019 DUF1705, score 201.9, E-value 1.4E-057; sulfatase 2326992..2328617 Arcobacter butzleri RM4018 5623306 YP_001491197.1 CDS Abu_2319 NC_009850.1 2328595 2329311 D PAP2 superfamily protein 2328595..2329311 Arcobacter butzleri RM4018 5623307 YP_001491198.1 CDS Abu_2320 NC_009850.1 2329407 2329808 D cytochrome c-type protein 2329407..2329808 Arcobacter butzleri RM4018 5623308 YP_001491199.1 CDS Abu_2321 NC_009850.1 2329818 2330324 D diheme cytochrome c precursor 2329818..2330324 Arcobacter butzleri RM4018 5623309 YP_001491200.1 CDS Abu_2322 NC_009850.1 2330334 2331107 D Pfam match to PF01292 Ni_hydr_CYTB, score 70.3, E-value 5.6E-018; cytochrome b 2330334..2331107 Arcobacter butzleri RM4018 5623310 YP_001491201.1 CDS Abu_2323 NC_009850.1 2331127 2331450 D hypothetical protein 2331127..2331450 Arcobacter butzleri RM4018 5623311 YP_001491202.1 CDS Abu_2324 NC_009850.1 2331410 2331796 D hypothetical protein 2331410..2331796 Arcobacter butzleri RM4018 5623312 YP_001491203.1 CDS Abu_2325 NC_009850.1 2331789 2332454 D Pfam matches to PF00072 Response_reg, score 116.3, E-value 3.5E-035, and to PF00486 Trans_reg_C, score 47.5, E-value 4E-011; two-component response regulator 2331789..2332454 Arcobacter butzleri RM4018 5623313 YP_001491204.1 CDS Abu_2326 NC_009850.1 2332456 2333646 D Pfam matches to PF00672 HAMP, score 56.7, E-value 7.1E-014, and to PF02518 HATPase_c, score 28.9, E-value 1.6E-005; two-component sensor histidine kinase 2332456..2333646 Arcobacter butzleri RM4018 5623314 YP_001491205.1 CDS Abu_2327 NC_009850.1 2333641 2334390 R Pfam match to PF08241 Methyltransf_11, score 124.7, E-value 2.4E-034; methyltransferase complement(2333641..2334390) Arcobacter butzleri RM4018 5623315 YP_001491206.1 CDS Abu_2328 NC_009850.1 2334454 2335305 R Pfam match to PF00165 HTH_AraC, score 46.5, E-value 7.9E-011; AraC family transcriptional regulator complement(2334454..2335305) Arcobacter butzleri RM4018 5623316 YP_001491207.1 CDS Abu_2329 NC_009850.1 2335317 2336894 R Pfam match to PF01966 HD, score 109.4, E-value 9.7E-030; HD_GYP domain-containing response regulator complement(2335317..2336894) Arcobacter butzleri RM4018 5623317 YP_001491208.1 CDS thyX NC_009850.1 2337020 2337847 D Pfam match to PF02511 Thy1, score -37.9, E-value 4.9E-006; thymidylate synthase ThyX 2337020..2337847 Arcobacter butzleri RM4018 5623318 YP_001491209.1 CDS glsA NC_009850.1 2337847 2338764 D Pfam match to PF04960 Glutaminase, score 515.8, E-value 8E-165; glutaminase A 2337847..2338764 Arcobacter butzleri RM4018 5625148 YP_001491210.1 CDS Abu_2332 NC_009850.1 2338783 2339400 D Pfam match to PF03458 UPF0126, score 95, E-value 2.1E-025; hypothetical protein 2338783..2339400 Arcobacter butzleri RM4018 5625149 YP_001491211.1 CDS Abu_2333 NC_009850.1 2339459 2339920 D hypothetical protein 2339459..2339920 Arcobacter butzleri RM4018 5625150 YP_001491212.1 CDS purN NC_009850.1 2339932 2340510 R Pfam match to PF00551 Formyl_trans_N, score 120.3, E-value 4.9E-033; phosphoribosylglycinamide formyltransferase complement(2339932..2340510) Arcobacter butzleri RM4018 5625151 YP_001491213.1 CDS ruvC NC_009850.1 2340558 2341022 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(2340558..2341022) Arcobacter butzleri RM4018 5625152 Abu_0149 tRNA Abu_0149 NC_009850.1 154425 154501 R tRNA-Arg complement(154425..154501) Arcobacter butzleri RM4018 5625219 Abu_0169 tRNA Abu_0169 NC_009850.1 169427 169504 D tRNA-Pro 169427..169504 Arcobacter butzleri RM4018 5624879 Abu_0170 tRNA Abu_0170 NC_009850.1 169523 169599 D tRNA-His 169523..169599 Arcobacter butzleri RM4018 5624880 Abu_0171 tRNA Abu_0171 NC_009850.1 169617 169693 D tRNA-Arg 169617..169693 Arcobacter butzleri RM4018 5624881 Abu_0172 tRNA Abu_0172 NC_009850.1 169698 169782 D tRNA-Leu 169698..169782 Arcobacter butzleri RM4018 5624778 Abu_0173 tRNA Abu_0173 NC_009850.1 169790 169866 D tRNA-Gly 169790..169866 Arcobacter butzleri RM4018 5624779 Abu_0174 tRNA Abu_0174 NC_009850.1 169935 170011 D tRNA-Arg 169935..170011 Arcobacter butzleri RM4018 5624780 Abu_0175 tRNA Abu_0175 NC_009850.1 170018 170094 D tRNA-Gly 170018..170094 Arcobacter butzleri RM4018 5624781 Abu_0509 tRNA Abu_0509 NC_009850.1 519310 519386 R tRNA-Asp complement(519310..519386) Arcobacter butzleri RM4018 5624830 Abu_0510 tRNA Abu_0510 NC_009850.1 519407 519482 R tRNA-Val complement(519407..519482) Arcobacter butzleri RM4018 5624831 Abu_0511 tRNA Abu_0511 NC_009850.1 519502 519576 R tRNA-Glu complement(519502..519576) Arcobacter butzleri RM4018 5624832 Abu_0512 tRNA Abu_0512 NC_009850.1 519599 519674 R tRNA-Lys complement(519599..519674) Arcobacter butzleri RM4018 5624833 Abu_0513 tRNA Abu_0513 NC_009850.1 519692 519768 R tRNA-Asp complement(519692..519768) Arcobacter butzleri RM4018 5625332 Abu_0514 tRNA Abu_0514 NC_009850.1 519832 519907 R tRNA-Val complement(519832..519907) Arcobacter butzleri RM4018 5625333 Abu_0515 tRNA Abu_0515 NC_009850.1 519927 520001 R tRNA-Glu complement(519927..520001) Arcobacter butzleri RM4018 5625334 Abu_0516 tRNA Abu_0516 NC_009850.1 520024 520099 R tRNA-Lys complement(520024..520099) Arcobacter butzleri RM4018 5625335 Abu_0842 tRNA Abu_0842 NC_009850.1 849083 849159 D tRNA-Ile 849083..849159 Arcobacter butzleri RM4018 5624498 Abu_0843 tRNA Abu_0843 NC_009850.1 849214 849289 D tRNA-Ala 849214..849289 Arcobacter butzleri RM4018 5624499 Abu_1229 tRNA Abu_1229 NC_009850.1 1234393 1234467 D tRNA-Gln 1234393..1234467 Arcobacter butzleri RM4018 5623253 Abu_1230 tRNA Abu_1230 NC_009850.1 1234492 1234568 D tRNA-Met 1234492..1234568 Arcobacter butzleri RM4018 5623254 Abu_1231 tRNA Abu_1231 NC_009850.1 1234645 1234721 D tRNA-Thr 1234645..1234721 Arcobacter butzleri RM4018 5623255 Abu_1323 tRNA Abu_1323 NC_009850.1 1324502 1324585 D tRNA-Leu 1324502..1324585 Arcobacter butzleri RM4018 5624296 Abu_1370 tRNA Abu_1370 NC_009850.1 1368656 1368731 R tRNA-Glu complement(1368656..1368731) Arcobacter butzleri RM4018 5624690 Abu_1523 tRNA Abu_1523 NC_009850.1 1529456 1529553 R tRNA-Sec complement(1529456..1529553) Arcobacter butzleri RM4018 5624665 Abu_1532 tRNA Abu_1532 NC_009850.1 1541409 1541483 D tRNA-Gln 1541409..1541483 Arcobacter butzleri RM4018 5623562 Abu_1533 tRNA Abu_1533 NC_009850.1 1541505 1541589 D tRNA-Tyr 1541505..1541589 Arcobacter butzleri RM4018 5623563 Abu_1534 tRNA Abu_1534 NC_009850.1 1541607 1541682 D tRNA-Phe 1541607..1541682 Arcobacter butzleri RM4018 5623564 Abu_1535 tRNA Abu_1535 NC_009850.1 1541707 1541793 D tRNA-Leu 1541707..1541793 Arcobacter butzleri RM4018 5623565 Abu_1750 tRNA Abu_1750 NC_009850.1 1755477 1755561 D tRNA-Leu 1755477..1755561 Arcobacter butzleri RM4018 5623788 Abu_1781 tRNA Abu_1781 NC_009850.1 1783515 1783590 R tRNA-Ala complement(1783515..1783590) Arcobacter butzleri RM4018 5624861 Abu_1782 tRNA Abu_1782 NC_009850.1 1783645 1783721 R tRNA-Ile complement(1783645..1783721) Arcobacter butzleri RM4018 5624862 Abu_1784 tRNA Abu_1784 NC_009850.1 1785562 1785636 R tRNA-Asn complement(1785562..1785636) Arcobacter butzleri RM4018 5624864 Abu_1849 tRNA Abu_1849 NC_009850.1 1854100 1854190 D tRNA-Ser 1854100..1854190 Arcobacter butzleri RM4018 5623510 Abu_1850 tRNA Abu_1850 NC_009850.1 1854195 1854271 D tRNA-Met 1854195..1854271 Arcobacter butzleri RM4018 5623511 Abu_1870 tRNA Abu_1870 NC_009850.1 1876219 1876295 D tRNA-Gly 1876219..1876295 Arcobacter butzleri RM4018 5623124 Abu_1871 tRNA Abu_1871 NC_009850.1 1876329 1876405 D tRNA-Met 1876329..1876405 Arcobacter butzleri RM4018 5623125 Abu_1876 tRNA Abu_1876 NC_009850.1 1882130 1882206 D tRNA-Met 1882130..1882206 Arcobacter butzleri RM4018 5623130 Abu_1877 tRNA Abu_1877 NC_009850.1 1882217 1882293 D tRNA-Thr 1882217..1882293 Arcobacter butzleri RM4018 5623131 Abu_1878 tRNA Abu_1878 NC_009850.1 1882311 1882385 D tRNA-Gln 1882311..1882385 Arcobacter butzleri RM4018 5623132 Abu_1891 tRNA Abu_1891 NC_009850.1 1896272 1896347 R tRNA-Trp complement(1896272..1896347) Arcobacter butzleri RM4018 5623724 Abu_1894 tRNA Abu_1894 NC_009850.1 1897989 1898065 R tRNA-Gly complement(1897989..1898065) Arcobacter butzleri RM4018 5623659 Abu_1895 tRNA Abu_1895 NC_009850.1 1898075 1898159 R tRNA-Tyr complement(1898075..1898159) Arcobacter butzleri RM4018 5623660 Abu_1896 tRNA Abu_1896 NC_009850.1 1898217 1898293 R tRNA-Thr complement(1898217..1898293) Arcobacter butzleri RM4018 5623661 Abu_1897 tRNA Abu_1897 NC_009850.1 1898305 1898380 R tRNA-Phe complement(1898305..1898380) Arcobacter butzleri RM4018 5623662 Abu_1915 tRNA Abu_1915 NC_009850.1 1918357 1918432 R tRNA-Ala complement(1918357..1918432) Arcobacter butzleri RM4018 5623448 Abu_1916 tRNA Abu_1916 NC_009850.1 1918487 1918563 R tRNA-Ile complement(1918487..1918563) Arcobacter butzleri RM4018 5623449 Abu_1918 tRNA Abu_1918 NC_009850.1 1920403 1920477 R tRNA-Asn complement(1920403..1920477) Arcobacter butzleri RM4018 5623451 Abu_1999 tRNA Abu_1999 NC_009850.1 2003298 2003373 R tRNA-Ala complement(2003298..2003373) Arcobacter butzleri RM4018 5623815 Abu_2000 tRNA Abu_2000 NC_009850.1 2003428 2003504 R tRNA-Ile complement(2003428..2003504) Arcobacter butzleri RM4018 5623816 Abu_2101 tRNA Abu_2101 NC_009850.1 2103541 2103627 D tRNA-Leu 2103541..2103627 Arcobacter butzleri RM4018 5624070 Abu_2102 tRNA Abu_2102 NC_009850.1 2103637 2103725 D tRNA-Ser 2103637..2103725 Arcobacter butzleri RM4018 5624071 Abu_2103 tRNA Abu_2103 NC_009850.1 2103791 2103866 D tRNA-Cys 2103791..2103866 Arcobacter butzleri RM4018 5624072 Abu_2270 tRNA Abu_2270 NC_009850.1 2274501 2274576 R tRNA-Ala complement(2274501..2274576) Arcobacter butzleri RM4018 5624656 Abu_2271 tRNA Abu_2271 NC_009850.1 2274631 2274707 R tRNA-Ile complement(2274631..2274707) Arcobacter butzleri RM4018 5624657 Abu_0841 rRNA Abu_0841 NC_009850.1 847461 848975 D 16S ribosomal RNA 847461..848975 Arcobacter butzleri RM4018 5624497 Abu_0844 rRNA Abu_0844 NC_009850.1 849680 852580 D 23S ribosomal RNA 849680..852580 Arcobacter butzleri RM4018 5624500 Abu_0845 rRNA Abu_0845 NC_009850.1 852738 852860 D 5S ribosomal RNA 852738..852860 Arcobacter butzleri RM4018 5623453 Abu_1779 rRNA Abu_1779 NC_009850.1 1779942 1780064 R 5S ribosomal RNA complement(1779942..1780064) Arcobacter butzleri RM4018 5624859 Abu_1780 rRNA Abu_1780 NC_009850.1 1780223 1783123 R 23S ribosomal RNA complement(1780223..1783123) Arcobacter butzleri RM4018 5624860 Abu_1783 rRNA Abu_1783 NC_009850.1 1783827 1785341 R 16S ribosomal RNA complement(1783827..1785341) Arcobacter butzleri RM4018 5624863 Abu_1913 rRNA Abu_1913 NC_009850.1 1914784 1914906 R 5S ribosomal RNA complement(1914784..1914906) Arcobacter butzleri RM4018 5623446 Abu_1914 rRNA Abu_1914 NC_009850.1 1915065 1917965 R 23S ribosomal RNA complement(1915065..1917965) Arcobacter butzleri RM4018 5623447 Abu_1917 rRNA Abu_1917 NC_009850.1 1918669 1920183 R 16S ribosomal RNA complement(1918669..1920183) Arcobacter butzleri RM4018 5623450 Abu_1997 rRNA Abu_1997 NC_009850.1 1999725 1999847 R 5S ribosomal RNA complement(1999725..1999847) Arcobacter butzleri RM4018 5625066 Abu_1998 rRNA Abu_1998 NC_009850.1 2000006 2002906 R 23S ribosomal RNA complement(2000006..2002906) Arcobacter butzleri RM4018 5623814 Abu_2001 rRNA Abu_2001 NC_009850.1 2003610 2005124 R 16S ribosomal RNA complement(2003610..2005124) Arcobacter butzleri RM4018 5623817 Abu_2268 rRNA Abu_2268 NC_009850.1 2270928 2271050 R 5S ribosomal RNA complement(2270928..2271050) Arcobacter butzleri RM4018 5624654 Abu_2269 rRNA Abu_2269 NC_009850.1 2271209 2274109 R 23S ribosomal RNA complement(2271209..2274109) Arcobacter butzleri RM4018 5624655 Abu_2272 rRNA Abu_2272 NC_009850.1 2274813 2276327 R 16S ribosomal RNA complement(2274813..2276327) Arcobacter butzleri RM4018 5624658