-- dump date 20120504_133753 -- class Genbank::CDS -- table cds_note -- id note YP_005548003.1 COG0593 ATPase involved in DNA replication initiation YP_005548004.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005548005.1 COG2501 Uncharacterized conserved protein YP_005548006.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005548007.1 Uncharacterized protein yaaB YP_005548008.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005548009.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005548010.1 hypothetical protein YaaC YP_005548011.1 COG0516 IMP dehydrogenase/GMP reductase YP_005548012.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005548013.1 COG0214 Pyridoxine biosynthesis enzyme YP_005548014.1 COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis YP_005548015.1 COG0172 Seryl-tRNA synthetase YP_005548016.1 COG1929 Glycerate kinase YP_005548018.1 COG1428 Deoxynucleoside kinases YP_005548019.1 COG1428 Deoxynucleoside kinases YP_005548020.1 COG3858 Predicted glycosyl hydrolase YP_005548021.1 COG1335 Amidases related to nicotinamidase YP_005548022.1 COG0590 Cytosine/adenosine deaminases YP_005548024.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005548025.1 COG0718 Uncharacterized protein conserved in bacteria YP_005548026.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005548030.1 COG4915 5-bromo-4-chloroindolyl phosphate hydrolysis protein YP_005548031.1 COG3853 Uncharacterized protein involved in tellurite resistance YP_005548032.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_005548033.1 COG0125 Thymidylate kinase YP_005548034.1 COG3870 Uncharacterized protein conserved in bacteria YP_005548035.1 COG1728 Uncharacterized protein conserved in bacteria YP_005548036.1 COG0470 ATPase involved in DNA replication YP_005548037.1 COG1774 Uncharacterized homolog of PSP1 YP_005548038.1 COG4467 Uncharacterized protein conserved in bacteria YP_005548039.1 COG4123 Predicted O-methyltransferase YP_005548040.1 COG2827 Predicted endonuclease containing a URI domain YP_005548041.1 COG0313 Predicted methyltransferases YP_005548042.1 COG2002 Regulators of stationary/sporulation gene expression YP_005548043.1 COG0143 Methionyl-tRNA synthetase YP_005548044.1 COG0084 Mg-dependent DNase YP_005548046.1 COG3583 Uncharacterized protein conserved in bacteria YP_005548047.1 COG1658 Small primase-like proteins (Toprim domain) YP_005548048.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005548050.1 COG4466 Uncharacterized protein conserved in bacteria YP_005548052.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005548053.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005548054.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005548055.1 COG2088 Uncharacterized protein, involved in the regulation of septum location YP_005548056.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005548057.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005548058.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005548059.1 COG0193 Peptidyl-tRNA hydrolase YP_005548061.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005548062.1 COG2002 Regulators of stationary/sporulation gene expression YP_005548063.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005548064.1 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain YP_005548065.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_005548068.1 COG2919 Septum formation initiator YP_005548069.1 COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) YP_005548070.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005548071.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_005548072.1 COG0515 Serine/threonine protein kinase YP_005548073.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005548074.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_005548075.1 COG0465 ATP-dependent Zn proteases YP_005548076.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_005548077.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_005548078.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005548079.1 COG0031 Cysteine synthase YP_005548080.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005548081.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005548082.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005548083.1 COG0294 Dihydropteroate synthase and related enzymes YP_005548084.1 COG1539 Dihydroneopterin aldolase YP_005548085.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005548086.1 COG1396 Predicted transcriptional regulators YP_005548087.1 COG0042 tRNA-dihydrouridine synthase YP_005548088.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005548089.1 COG4463 Transcriptional repressor of class III stress genes YP_005548090.1 COG3880 Uncharacterized protein with conserved CXXC pairs YP_005548091.1 COG3869 Arginine kinase YP_005548092.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005548093.1 COG1066 Predicted ATP-dependent serine protease YP_005548094.1 COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) YP_005548095.1 COG4956 Integral membrane protein (PIN domain superfamily) YP_005548096.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005548097.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005548098.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005548099.1 COG1492 Cobyric acid synthase YP_005548100.1 COG1045 Serine acetyltransferase YP_005548101.1 COG0215 Cysteinyl-tRNA synthetase YP_005548102.1 COG1939 Uncharacterized protein conserved in bacteria YP_005548103.1 COG0566 rRNA methylases YP_005548104.1 COG3688 Predicted RNA-binding protein containing a PIN domain YP_005548105.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005548106.1 COG0267 Ribosomal protein L33 YP_005548107.1 COG0690 Preprotein translocase subunit SecE YP_005548108.1 COG0250 Transcription antiterminator YP_005548109.1 COG0080 Ribosomal protein L11 YP_005548110.1 COG0081 Ribosomal protein L1 YP_005548111.1 COG0244 Ribosomal protein L10 YP_005548112.1 COG0222 Ribosomal protein L7/L12 YP_005548113.1 COG2813 16S RNA G1207 methylase RsmC YP_005548114.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005548115.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005548116.1 COG1358 Ribosomal protein HS6-type (S12/L30/L7a) YP_005548117.1 COG0049 Ribosomal protein S7 YP_005548118.1 COG0480 Translation elongation factors (GTPases) YP_005548119.1 COG0050 GTPases - translation elongation factors YP_005548120.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005548121.1 COG5557 Polysulphide reductase YP_005548122.1 COG0087 Ribosomal protein L3 YP_005548123.1 COG0088 Ribosomal protein L4 YP_005548124.1 COG0089 Ribosomal protein L23 YP_005548125.1 COG0090 Ribosomal protein L2 YP_005548126.1 COG0185 Ribosomal protein S19 YP_005548127.1 COG0092 Ribosomal protein S3 YP_005548128.1 COG0197 Ribosomal protein L16/L10E YP_005548129.1 COG0255 Ribosomal protein L29 YP_005548130.1 COG0186 Ribosomal protein S17 YP_005548131.1 COG0198 Ribosomal protein L24 YP_005548132.1 COG0094 Ribosomal protein L5 YP_005548133.1 COG0096 Ribosomal protein S8 YP_005548134.1 COG0097 Ribosomal protein L6P/L9E YP_005548135.1 COG0256 Ribosomal protein L18 YP_005548136.1 COG0098 Ribosomal protein S5 YP_005548137.1 COG1841 Ribosomal protein L30/L7E YP_005548138.1 COG0200 Ribosomal protein L15 YP_005548139.1 COG0201 Preprotein translocase subunit SecY YP_005548140.1 COG0563 Adenylate kinase and related kinases YP_005548141.1 COG0024 Methionine aminopeptidase YP_005548142.1 COG0257 Ribosomal protein L36 YP_005548143.1 COG0099 Ribosomal protein S13 YP_005548144.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005548145.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005548146.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005548147.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters YP_005548148.1 COG0101 Pseudouridylate synthase YP_005548149.1 COG0102 Ribosomal protein L13 YP_005548151.1 COG0500 SAM-dependent methyltransferases YP_005548153.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005548154.1 COG0489 ATPases involved in chromosome partitioning YP_005548157.1 COG0726 Predicted xylanase/chitin deacetylase YP_005548159.1 COG0738 Fucose permease YP_005548160.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_005548161.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005548162.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005548163.1 COG3513 Uncharacterized protein conserved in bacteria YP_005548164.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005548165.1 COG0385 Predicted Na+-dependent transporter YP_005548166.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_005548167.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005548168.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005548169.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005548170.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005548171.1 COG3876 Uncharacterized protein conserved in bacteria YP_005548172.1 COG1472 Beta-glucosidase-related glycosidases YP_005548173.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005548174.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005548176.1 COG2103 Predicted sugar phosphate isomerase YP_005548177.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005548178.1 COG1683 Uncharacterized conserved protein YP_005548179.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005548180.1 COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor) YP_005548181.1 COG1624 Uncharacterized conserved protein YP_005548182.1 COG4856 Uncharacterized protein conserved in bacteria YP_005548183.1 COG1109 Phosphomannomutase YP_005548186.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005548188.1 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005548189.1 COG1295 Predicted membrane protein YP_005548192.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005548193.1 COG1346 Putative effector of murein hydrolase YP_005548194.1 COG1380 Putative effector of murein hydrolase LrgA YP_005548195.1 COG1846 Transcriptional regulators YP_005548196.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005548197.1 COG1011 Predicted hydrolase (HAD superfamily) YP_005548198.1 COG4585 Signal transduction histidine kinase YP_005548199.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005548200.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005548201.1 COG0842 ABC-type multidrug transport system, permease component YP_005548202.1 COG0842 ABC-type multidrug transport system, permease component YP_005548207.1 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 YP_005548208.1 COG0531 Amino acid transporters YP_005548210.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005548211.1 COG2271 Sugar phosphate permease YP_005548212.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005548214.1 COG2368 Aromatic ring hydroxylase YP_005548217.1 COG1476 Predicted transcriptional regulators YP_005548218.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005548219.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) YP_005548221.1 COG1183 Phosphatidylserine synthase YP_005548222.1 COG0586 Uncharacterized membrane-associated protein YP_005548223.1 COG0688 Phosphatidylserine decarboxylase YP_005548225.1 COG1054 Predicted sulfurtransferase YP_005548226.1 COG1301 Na+/H+-dicarboxylate symporters YP_005548228.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005548229.1 COG0833 Amino acid transporters YP_005548230.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_005548231.1 COG1115 Na+/alanine symporter YP_005548232.1 COG2066 Glutaminase YP_005548233.1 COG0642 Signal transduction histidine kinase YP_005548234.1 COG0784 FOG: CheY-like receiver YP_005548235.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005548237.1 COG3666 Transposase and inactivated derivatives YP_005548238.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005548239.1 COG0778 Nitroreductase YP_005548240.1 COG0346 Lactoylglutathione lyase and related lyases YP_005548241.1 COG2259 Predicted membrane protein YP_005548242.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005548243.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_005548247.1 COG3773 Cell wall hydrolyses involved in spore germination YP_005548249.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_005548250.1 COG1826 Sec-independent protein secretion pathway components YP_005548251.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005548252.1 COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) YP_005548253.1 COG0520 Selenocysteine lyase YP_005548254.1 COG0477 Permeases of the major facilitator superfamily YP_005548255.1 COG1309 Transcriptional regulator YP_005548256.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_005548257.1 COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA YP_005548258.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005548263.1 COG0457 FOG: TPR repeat YP_005548264.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005548265.1 COG0366 Glycosidases YP_005548267.1 COG1695 Predicted transcriptional regulators YP_005548268.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005548269.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005548270.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005548271.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005548272.1 COG2319 FOG: WD40 repeat YP_005548273.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_005548274.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_005548275.1 COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_005548276.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005548278.1 COG3853 Uncharacterized protein involved in tellurite resistance YP_005548279.1 COG0477 Permeases of the major facilitator superfamily YP_005548280.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_005548281.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_005548282.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_005548283.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005548284.1 COG1288 Predicted membrane protein YP_005548285.1 COG1288 Predicted membrane protein YP_005548286.1 COG1714 Predicted membrane protein/domain YP_005548287.1 COG0039 Malate/lactate dehydrogenases YP_005548288.1 COG0477 Permeases of the major facilitator superfamily YP_005548289.1 COG1846 Transcriptional regulators YP_005548290.1 COG1280 Putative threonine efflux protein YP_005548291.1 COG3403 Uncharacterized conserved protein YP_005548292.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005548293.1 COG3665 Uncharacterized conserved protein YP_005548294.1 COG0171 NAD synthase YP_005548295.1 COG3623 Putative L-xylulose-5-phosphate 3-epimerase YP_005548296.1 COG0477 Permeases of the major facilitator superfamily YP_005548297.1 COG0703 Shikimate kinase YP_005548298.1 COG3458 Acetyl esterase (deacetylase) YP_005548299.1 COG3541 Predicted nucleotidyltransferase YP_005548300.1 COG0506 Proline dehydrogenase YP_005548301.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005548302.1 COG0591 Na+/proline symporter YP_005548303.1 COG2508 Regulator of polyketide synthase expression YP_005548304.1 COG0492 Thioredoxin reductase YP_005548305.1 COG0007 Uroporphyrinogen-III methylase YP_005548306.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_005548307.1 COG1251 NAD(P)H-nitrite reductase YP_005548308.1 COG2223 Nitrate/nitrite transporter YP_005548309.1 COG0523 Putative GTPases (G3E family) YP_005548310.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005548311.1 COG1714 Predicted membrane protein/domain YP_005548313.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005548316.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005548317.1 COG0269 3-hexulose-6-phosphate synthase and related proteins YP_005548318.1 COG1733 Predicted transcriptional regulators YP_005548320.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005548321.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005548322.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005548323.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_005548325.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005548326.1 COG2091 Phosphopantetheinyl transferase YP_005548327.1 COG2364 Predicted membrane protein YP_005548328.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005548329.1 COG0765 ABC-type amino acid transport system, permease component YP_005548330.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005548331.1 COG0583 Transcriptional regulator YP_005548332.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005548333.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005548336.1 COG3104 Dipeptide/tripeptide permease YP_005548343.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005548344.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005548345.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005548346.1 COG0765 ABC-type amino acid transport system, permease component YP_005548347.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005548348.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005548349.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_005548350.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005548351.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005548352.1 COG0845 Membrane-fusion protein YP_005548353.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005548354.1 COG0642 Signal transduction histidine kinase YP_005548356.1 COG0457 FOG: TPR repeat YP_005548360.1 COG0527 Aspartokinases YP_005548362.1 COG4606 ABC-type enterochelin transport system, permease component YP_005548363.1 COG4605 ABC-type enterochelin transport system, permease component YP_005548364.1 COG4604 ABC-type enterochelin transport system, ATPase component YP_005548365.1 COG4607 ABC-type enterochelin transport system, periplasmic component YP_005548366.1 COG0477 Permeases of the major facilitator superfamily YP_005548367.1 COG1309 Transcriptional regulator YP_005548368.1 COG0778 Nitroreductase YP_005548369.1 COG1359 Uncharacterized conserved protein YP_005548370.1 COG0640 Predicted transcriptional regulators YP_005548371.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005548372.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_005548373.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005548374.1 COG4975 Putative glucose uptake permease YP_005548375.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005548376.1 COG4549 Uncharacterized protein conserved in bacteria YP_005548377.1 COG1276 Putative copper export protein YP_005548378.1 COG1349 Transcriptional regulators of sugar metabolism YP_005548381.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component YP_005548382.1 COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain YP_005548383.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_005548384.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005548386.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005548387.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_005548388.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_005548389.1 COG4336 Uncharacterized conserved protein YP_005548390.1 COG2049 Allophanate hydrolase subunit 1 YP_005548391.1 COG1984 Allophanate hydrolase subunit 2 YP_005548392.1 COG1414 Transcriptional regulator YP_005548393.1 COG2755 Lysophospholipase L1 and related esterases YP_005548395.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_005548396.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005548397.1 COG4989 Predicted oxidoreductase YP_005548398.1 COG3711 Transcriptional antiterminator YP_005548399.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005548401.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005548402.1 COG3822 ABC-type sugar transport system, auxiliary component YP_005548403.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005548404.1 COG3871 Uncharacterized stress protein (general stress protein 26) YP_005548407.1 COG1522 Transcriptional regulators YP_005548408.1 COG0550 Topoisomerase IA YP_005548409.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_005548411.1 COG2199 FOG: GGDEF domain YP_005548412.1 COG5298 Uncharacterized protein conserved in bacteria YP_005548414.1 COG0531 Amino acid transporters YP_005548415.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase YP_005548416.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005548418.1 COG1388 FOG: LysM repeat YP_005548419.1 COG4477 Negative regulator of septation ring formation YP_005548421.1 COG0457 FOG: TPR repeat YP_005548424.1 COG2205 Osmosensitive K+ channel histidine kinase YP_005548425.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_005548426.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_005548428.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005548429.1 COG4876 Uncharacterized protein conserved in bacteria YP_005548431.1 COG2076 Membrane transporters of cations and cationic drugs YP_005548433.1 COG3729 General stress protein YP_005548434.1 COG0662 Mannose-6-phosphate isomerase YP_005548436.1 COG3546 Mn-containing catalase YP_005548437.1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component YP_005548438.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005548439.1 COG4565 Response regulator of citrate/malate metabolism YP_005548440.1 COG1301 Na+/H+-dicarboxylate symporters YP_005548441.1 COG0628 Predicted permease YP_005548442.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005548443.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_005548445.1 COG1960 Acyl-CoA dehydrogenases YP_005548448.1 COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain YP_005548449.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005548450.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005548451.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005548452.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005548454.1 COG0513 Superfamily II DNA and RNA helicases YP_005548455.1 COG3402 Uncharacterized conserved protein YP_005548456.1 COG3428 Predicted membrane protein YP_005548457.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_005548458.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005548459.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005548461.1 COG0787 Alanine racemase YP_005548462.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005548463.1 COG2337 Growth inhibitor YP_005548464.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005548465.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005548466.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_005548467.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005548468.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005548469.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_005548470.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005548472.1 COG2183 Transcriptional accessory protein YP_005548474.1 COG3091 Uncharacterized protein conserved in bacteria YP_005548475.1 COG0657 Esterase/lipase YP_005548476.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005548477.1 COG1846 Transcriptional regulators YP_005548478.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005548479.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005548480.1 COG0477 Permeases of the major facilitator superfamily YP_005548481.1 COG4124 Beta-mannanase YP_005548482.1 COG2946 Putative phage replication protein RstA YP_005548484.1 COG1959 Predicted transcriptional regulator YP_005548485.1 COG1182 Acyl carrier protein phosphodiesterase YP_005548486.1 COG1278 Cold shock proteins YP_005548490.1 COG1794 Aspartate racemase YP_005548493.1 COG1695 Predicted transcriptional regulators YP_005548495.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005548496.1 COG0477 Permeases of the major facilitator superfamily YP_005548497.1 COG3621 Patatin YP_005548499.1 COG0277 FAD/FMN-containing dehydrogenases YP_005548501.1 COG0346 Lactoylglutathione lyase and related lyases YP_005548503.1 COG1230 Co/Zn/Cd efflux system component YP_005548504.1 COG0586 Uncharacterized membrane-associated protein YP_005548505.1 COG0662 Mannose-6-phosphate isomerase YP_005548506.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005548507.1 COG3708 Uncharacterized protein conserved in bacteria YP_005548508.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005548509.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005548511.1 COG0642 Signal transduction histidine kinase YP_005548512.1 COG0798 Arsenite efflux pump ACR3 and related permeases YP_005548513.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005548515.1 COG0789 Predicted transcriptional regulators YP_005548517.1 COG1757 Na+/H+ antiporter YP_005548518.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005548520.1 COG2808 Transcriptional regulator YP_005548521.1 COG0477 Permeases of the major facilitator superfamily YP_005548522.1 COG1309 Transcriptional regulator YP_005548523.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005548524.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005548525.1 COG5577 Spore coat protein YP_005548527.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005548528.1 COG5577 Spore coat protein YP_005548529.1 COG5577 Spore coat protein YP_005548530.1 COG2409 Predicted drug exporters of the RND superfamily YP_005548531.1 COG2071 Predicted glutamine amidotransferases YP_005548532.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005548533.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005548534.1 COG1284 Uncharacterized conserved protein YP_005548535.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005548536.1 COG0477 Permeases of the major facilitator superfamily YP_005548537.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005548538.1 COG1396 Predicted transcriptional regulators YP_005548539.1 COG0730 Predicted permeases YP_005548540.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005548541.1 COG4978 Transcriptional regulator, effector-binding domain/component YP_005548542.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005548543.1 COG1051 ADP-ribose pyrophosphatase YP_005548544.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005548545.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005548546.1 COG1802 Transcriptional regulators YP_005548548.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_005548553.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005548555.1 COG0863 DNA modification methylase YP_005548557.1 COG2814 Arabinose efflux permease YP_005548558.1 COG2188 Transcriptional regulators YP_005548559.1 COG2186 Transcriptional regulators YP_005548560.1 COG2807 Cyanate permease YP_005548561.1 COG2076 Membrane transporters of cations and cationic drugs YP_005548562.1 COG2076 Membrane transporters of cations and cationic drugs YP_005548563.1 COG1309 Transcriptional regulator YP_005548564.1 COG0531 Amino acid transporters YP_005548565.1 COG3546 Mn-containing catalase YP_005548566.1 COG3832 Uncharacterized conserved protein YP_005548567.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005548568.1 COG0477 Permeases of the major facilitator superfamily YP_005548569.1 COG0611 Thiamine monophosphate kinase YP_005548570.1 COG0802 Predicted ATPase or kinase YP_005548571.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005548572.1 COG0456 Acetyltransferases YP_005548573.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005548574.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005548575.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_005548576.1 COG2344 AT-rich DNA-binding protein YP_005548577.1 COG1826 Sec-independent protein secretion pathway components YP_005548578.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005548580.1 COG1266 Predicted metal-dependent membrane protease YP_005548581.1 COG0234 Co-chaperonin GroES (HSP10) YP_005548582.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005548583.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_005548585.1 COG0457 FOG: TPR repeat YP_005548586.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005548587.1 COG2211 Na+/melibiose symporter and related transporters YP_005548588.1 COG0524 Sugar kinases, ribokinase family YP_005548590.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_005548592.1 COG1512 Beta-propeller domains of methanol dehydrogenase type YP_005548593.1 COG4260 Putative virion core protein (lumpy skin disease virus) YP_005548594.1 COG1835 Predicted acyltransferases YP_005548595.1 COG4961 Flp pilus assembly protein TadG YP_005548597.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005548598.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005548603.1 COG2132 Putative multicopper oxidases YP_005548604.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005548606.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005548607.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005548608.1 COG0714 MoxR-like ATPases YP_005548609.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_005548610.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_005548611.1 COG0519 GMP synthase, PP-ATPase domain/subunit YP_005548612.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005548613.1 COG1520 FOG: WD40-like repeat YP_005548614.1 COG2252 Permeases YP_005548618.1 COG4843 Uncharacterized protein conserved in bacteria YP_005548621.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_005548622.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_005548623.1 COG0015 Adenylosuccinate lyase YP_005548624.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_005548625.1 COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component YP_005548626.1 COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain YP_005548627.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_005548628.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_005548629.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_005548630.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_005548631.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_005548632.1 COG0151 Phosphoribosylamine-glycine ligase YP_005548633.1 COG1522 Transcriptional regulators YP_005548634.1 COG0531 Amino acid transporters YP_005548636.1 COG1001 Adenine deaminase YP_005548638.1 COG4496 Uncharacterized protein conserved in bacteria YP_005548639.1 COG0069 Glutamate synthase domain 2 YP_005548641.1 COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold YP_005548642.1 COG0210 Superfamily I DNA and RNA helicases YP_005548643.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005548644.1 COG4851 Protein involved in sex pheromone biosynthesis YP_005548645.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_005548646.1 COG1285 Uncharacterized membrane protein YP_005548647.1 COG0591 Na+/proline symporter YP_005548648.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005548649.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005548650.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005548651.1 COG1309 Transcriptional regulator YP_005548652.1 COG0841 Cation/multidrug efflux pump YP_005548653.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_005548654.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005548655.1 COG3410 Uncharacterized conserved protein YP_005548656.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005548657.1 COG0842 ABC-type multidrug transport system, permease component YP_005548658.1 COG5444 Uncharacterized conserved protein YP_005548659.1 COG5444 Uncharacterized conserved protein YP_005548660.1 COG5444 Uncharacterized conserved protein YP_005548661.1 COG5444 Uncharacterized conserved protein YP_005548662.1 COG5444 Uncharacterized conserved protein YP_005548663.1 COG0217 Uncharacterized conserved protein YP_005548668.1 COG3546 Mn-containing catalase YP_005548669.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005548670.1 COG2202 FOG: PAS/PAC domain YP_005548672.1 COG2323 Predicted membrane protein YP_005548673.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_005548674.1 COG0346 Lactoylglutathione lyase and related lyases YP_005548675.1 COG1035 Coenzyme F420-reducing hydrogenase, beta subunit YP_005548677.1 COG5583 Uncharacterized small protein YP_005548678.1 COG0196 FAD synthase YP_005548679.1 COG0670 Integral membrane protein, interacts with FtsH YP_005548680.1 COG1846 Transcriptional regulators YP_005548681.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005548683.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_005548685.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005548687.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_005548688.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005548690.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005548692.1 COG0477 Permeases of the major facilitator superfamily YP_005548693.1 COG0531 Amino acid transporters YP_005548694.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005548695.1 COG0840 Methyl-accepting chemotaxis protein YP_005548696.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005548697.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005548698.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005548700.1 COG0789 Predicted transcriptional regulators YP_005548701.1 COG0477 Permeases of the major facilitator superfamily YP_005548702.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005548703.1 COG0513 Superfamily II DNA and RNA helicases YP_005548704.1 COG2130 Putative NADP-dependent oxidoreductases YP_005548707.1 COG3866 Pectate lyase YP_005548708.1 COG0471 Di- and tricarboxylate transporters YP_005548709.1 COG2373 Large extracellular alpha-helical protein YP_005548714.1 COG2972 Predicted signal transduction protein with a C-terminal ATPase domain YP_005548715.1 COG3947 Response regulator containing CheY-like receiver and SARP domains YP_005548716.1 COG4932 Predicted outer membrane protein YP_005548717.1 COG3764 Sortase (surface protein transpeptidase) YP_005548719.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005548720.1 COG4565 Response regulator of citrate/malate metabolism YP_005548721.1 COG3181 Uncharacterized protein conserved in bacteria YP_005548722.1 COG2851 H+/citrate symporter YP_005548723.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005548724.1 COG4362 Nitric oxide synthase, oxygenase domain YP_005548725.1 COG1254 Acylphosphatases YP_005548726.1 COG2258 Uncharacterized protein conserved in bacteria YP_005548730.1 COG0024 Methionine aminopeptidase YP_005548731.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005548733.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005548735.1 COG0071 Molecular chaperone (small heat shock protein) YP_005548738.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005548739.1 COG0366 Glycosidases YP_005548740.1 COG2188 Transcriptional regulators YP_005548741.1 COG0778 Nitroreductase YP_005548742.1 COG5438 Predicted multitransmembrane protein YP_005548743.1 COG5438 Predicted multitransmembrane protein YP_005548744.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005548745.1 COG0693 Putative intracellular protease/amidase YP_005548746.1 COG1609 Transcriptional regulators YP_005548748.1 COG0169 Shikimate 5-dehydrogenase YP_005548749.1 COG0710 3-dehydroquinate dehydratase YP_005548750.1 COG0477 Permeases of the major facilitator superfamily YP_005548751.1 COG4840 Uncharacterized protein conserved in bacteria YP_005548752.1 COG0394 Protein-tyrosine-phosphatase YP_005548754.1 COG1295 Predicted membrane protein YP_005548756.1 COG0477 Permeases of the major facilitator superfamily YP_005548757.1 COG0387 Ca2+/H+ antiporter YP_005548759.1 COG0668 Small-conductance mechanosensitive channel YP_005548762.1 COG0726 Predicted xylanase/chitin deacetylase YP_005548763.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005548764.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005548765.1 COG0598 Mg2+ and Co2+ transporters YP_005548766.1 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase YP_005548767.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005548769.1 COG1404 Subtilisin-like serine proteases YP_005548770.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005548771.1 COG0515 Serine/threonine protein kinase YP_005548774.1 COG0042 tRNA-dihydrouridine synthase YP_005548777.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005548778.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005548779.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005548780.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005548781.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_005548783.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_005548784.1 COG1737 Transcriptional regulators YP_005548785.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005548787.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005548788.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005548789.1 COG2259 Predicted membrane protein YP_005548790.1 COG2514 Predicted ring-cleavage extradiol dioxygenase YP_005548792.1 COG1695 Predicted transcriptional regulators YP_005548793.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005548794.1 COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation YP_005548796.1 COG2732 Barstar, RNAse (barnase) inhibitor YP_005548798.1 COG0477 Permeases of the major facilitator superfamily YP_005548799.1 COG1846 Transcriptional regulators YP_005548800.1 COG2898 Uncharacterized conserved protein YP_005548801.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_005548802.1 COG0778 Nitroreductase YP_005548805.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_005548806.1 COG2137 Uncharacterized protein conserved in bacteria YP_005548808.1 COG2814 Arabinose efflux permease YP_005548810.1 COG3591 V8-like Glu-specific endopeptidase YP_005548815.1 COG5658 Predicted integral membrane protein YP_005548816.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005548817.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005548818.1 COG4485 Predicted membrane protein YP_005548819.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_005548820.1 COG1194 A/G-specific DNA glycosylase YP_005548821.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005548824.1 COG3557 Uncharacterized domain/protein associated with RNAses G and E YP_005548825.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005548826.1 COG4129 Predicted membrane protein YP_005548827.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005548828.1 COG1225 Peroxiredoxin YP_005548829.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005548833.1 COG1757 Na+/H+ antiporter YP_005548834.1 COG3340 Peptidase E YP_005548835.1 COG0422 Thiamine biosynthesis protein ThiC YP_005548836.1 COG0277 FAD/FMN-containing dehydrogenases YP_005548838.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005548839.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005548840.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005548841.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005548842.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005548843.1 COG0753 Catalase YP_005548844.1 COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_005548846.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005548847.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005548848.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005548849.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005548852.1 COG0199 Ribosomal protein S14 YP_005548854.1 COG1476 Predicted transcriptional regulators YP_005548855.1 COG3382 Uncharacterized conserved protein YP_005548856.1 COG1600 Uncharacterized Fe-S protein YP_005548858.1 COG0219 Predicted rRNA methylase (SpoU class) YP_005548860.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005548861.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005548863.1 COG2766 Putative Ser protein kinase YP_005548865.1 COG2718 Uncharacterized conserved protein YP_005548866.1 COG1846 Transcriptional regulators YP_005548867.1 COG1566 Multidrug resistance efflux pump YP_005548868.1 COG0477 Permeases of the major facilitator superfamily YP_005548869.1 COG0655 Multimeric flavodoxin WrbA YP_005548872.1 COG1725 Predicted transcriptional regulators YP_005548873.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005548874.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005548875.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_005548876.1 COG1278 Cold shock proteins YP_005548877.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005548878.1 COG2199 FOG: GGDEF domain YP_005548879.1 COG1823 Predicted Na+/dicarboxylate symporter YP_005548880.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005548884.1 COG5577 Spore coat protein YP_005548885.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005548886.1 COG3764 Sortase (surface protein transpeptidase) YP_005548887.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005548889.1 COG0517 FOG: CBS domain YP_005548890.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005548891.1 COG0388 Predicted amidohydrolase YP_005548892.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005548893.1 COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) YP_005548894.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_005548895.1 COG0554 Glycerol kinase YP_005548896.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_005548897.1 COG1109 Phosphomannomutase YP_005548898.1 COG4585 Signal transduction histidine kinase YP_005548899.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005548900.1 COG0431 Predicted flavoprotein YP_005548903.1 COG1388 FOG: LysM repeat YP_005548904.1 COG1959 Predicted transcriptional regulator YP_005548906.1 COG2719 Uncharacterized conserved protein YP_005548907.1 COG1785 Alkaline phosphatase YP_005548909.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005548910.1 COG0583 Transcriptional regulator YP_005548911.1 COG0372 Citrate synthase YP_005548912.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005548913.1 COG0531 Amino acid transporters YP_005548914.1 COG0733 Na+-dependent transporters of the SNF family YP_005548917.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005548918.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005548919.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005548920.1 COG0789 Predicted transcriptional regulators YP_005548921.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005548922.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005548924.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005548925.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005548926.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005548927.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005548929.1 COG0668 Small-conductance mechanosensitive channel YP_005548930.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005548931.1 COG0726 Predicted xylanase/chitin deacetylase YP_005548932.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005548933.1 COG1309 Transcriptional regulator YP_005548936.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005548939.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005548940.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005548941.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005548949.1 COG4399 Uncharacterized protein conserved in bacteria YP_005548950.1 COG3679 Uncharacterized conserved protein YP_005548951.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005548952.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005548953.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005548954.1 COG3486 Lysine/ornithine N-monooxygenase YP_005548955.1 COG0475 Kef-type K+ transport systems, membrane components YP_005548956.1 COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels YP_005548958.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005548960.1 COG4152 ABC-type uncharacterized transport system, ATPase component YP_005548961.1 COG1668 ABC-type Na+ efflux pump, permease component YP_005548962.1 COG0420 DNA repair exonuclease YP_005548963.1 COG4717 Uncharacterized conserved protein YP_005548964.1 COG3481 Predicted HD-superfamily hydrolase YP_005548966.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005548972.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_005548974.1 COG4980 Gas vesicle protein YP_005548977.1 COG1932 Phosphoserine aminotransferase YP_005548978.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005548979.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005548980.1 COG4473 Predicted ABC-type exoprotein transport system, permease component YP_005548982.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005548984.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_005548985.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005548986.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005548987.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005548988.1 COG1232 Protoporphyrinogen oxidase YP_005548989.1 COG1309 Transcriptional regulator YP_005548990.1 COG1511 Predicted membrane protein YP_005548992.1 COG0332 3-oxoacyl-[acyl-carrier-protein YP_005548994.1 COG1363 Cellulase M and related proteins YP_005548995.1 COG1301 Na+/H+-dicarboxylate symporters YP_005548997.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_005548998.1 COG0095 Lipoate-protein ligase A YP_005548999.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_005549000.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005549002.1 COG0501 Zn-dependent protease with chaperone function YP_005549003.1 COG1404 Subtilisin-like serine proteases YP_005549004.1 COG4594 ABC-type Fe3+-citrate transport system, periplasmic component YP_005549005.1 COG0406 Fructose-2,6-bisphosphatase YP_005549006.1 COG0183 Acetyl-CoA acetyltransferase YP_005549007.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005549008.1 COG1268 Uncharacterized conserved protein YP_005549009.1 COG0840 Methyl-accepting chemotaxis protein YP_005549010.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005549011.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005549013.1 COG4903 Genetic competence transcription factor YP_005549014.1 COG5646 Uncharacterized conserved protein YP_005549015.1 COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases YP_005549018.1 COG0393 Uncharacterized conserved protein YP_005549019.1 COG0591 Na+/proline symporter YP_005549022.1 COG0398 Uncharacterized conserved protein YP_005549023.1 COG0681 Signal peptidase I YP_005549025.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005549026.1 COG1846 Transcriptional regulators YP_005549027.1 COG3180 Putative ammonia monooxygenase YP_005549028.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005549029.1 COG1309 Transcriptional regulator YP_005549031.1 COG1633 Uncharacterized conserved protein YP_005549032.1 COG2323 Predicted membrane protein YP_005549033.1 COG3857 ATP-dependent nuclease, subunit B YP_005549034.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005549035.1 COG0420 DNA repair exonuclease YP_005549036.1 COG0419 ATPase involved in DNA repair YP_005549037.1 COG1403 Restriction endonuclease YP_005549047.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_005549050.1 COG1404 Subtilisin-like serine proteases YP_005549052.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_005549053.1 COG1562 Phytoene/squalene synthetase YP_005549054.1 COG0534 Na+-driven multidrug efflux pump YP_005549055.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005549056.1 COG1609 Transcriptional regulators YP_005549058.1 COG0673 Predicted dehydrogenases and related proteins YP_005549059.1 COG2318 Uncharacterized protein conserved in bacteria YP_005549060.1 COG1279 Lysine efflux permease YP_005549061.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005549062.1 COG1357 Uncharacterized low-complexity proteins YP_005549063.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005549064.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_005549065.1 COG1666 Uncharacterized protein conserved in bacteria YP_005549066.1 COG2996 Uncharacterized protein conserved in bacteria YP_005549067.1 COG0305 Replicative DNA helicase YP_005549068.1 COG0840 Methyl-accepting chemotaxis protein YP_005549069.1 COG2124 Cytochrome P450 YP_005549071.1 COG1307 Uncharacterized protein conserved in bacteria YP_005549072.1 COG1284 Uncharacterized conserved protein YP_005549074.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005549075.1 COG0642 Signal transduction histidine kinase YP_005549076.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005549077.1 COG1073 Hydrolases of the alpha/beta superfamily YP_005549078.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_005549079.1 COG0346 Lactoylglutathione lyase and related lyases YP_005549080.1 COG0277 FAD/FMN-containing dehydrogenases YP_005549081.1 COG1015 Phosphopentomutase YP_005549082.1 COG0005 Purine nucleoside phosphorylase YP_005549083.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005549084.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005549085.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_005549086.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005549094.1 COG0019 Diaminopimelate decarboxylase YP_005549095.1 COG4086 Predicted secreted protein YP_005549096.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005549097.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005549098.1 COG4846 Membrane protein involved in cytochrome C biogenesis YP_005549100.1 COG0681 Signal peptidase I YP_005549103.1 COG1985 Pyrimidine reductase, riboflavin biosynthesis YP_005549104.1 COG0307 Riboflavin synthase alpha chain YP_005549105.1 COG0807 GTP cyclohydrolase II YP_005549106.1 COG0054 Riboflavin synthase beta-chain YP_005549108.1 COG1547 Uncharacterized conserved protein YP_005549109.1 COG1354 Uncharacterized conserved protein YP_005549110.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_005549112.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005549113.1 COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. YP_005549114.1 COG0700 Uncharacterized membrane protein YP_005549115.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005549116.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005549117.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_005549118.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005549119.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005549120.1 COG0642 Signal transduction histidine kinase YP_005549121.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005549123.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005549125.1 COG3601 Predicted membrane protein YP_005549127.1 COG1141 Ferredoxin YP_005549128.1 COG4955 Uncharacterized protein conserved in bacteria YP_005549129.1 COG0514 Superfamily II DNA helicase YP_005549130.1 COG1266 Predicted metal-dependent membrane protease YP_005549134.1 COG1408 Predicted phosphohydrolases YP_005549136.1 COG2109 ATP:corrinoid adenosyltransferase YP_005549137.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005549138.1 COG0492 Thioredoxin reductase YP_005549139.1 COG2339 Predicted membrane protein YP_005549140.1 COG3773 Cell wall hydrolyses involved in spore germination YP_005549142.1 COG5581 Predicted glycosyltransferase YP_005549144.1 COG0283 Cytidylate kinase YP_005549145.1 COG0539 Ribosomal protein S1 YP_005549146.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005549149.1 COG1160 Predicted GTPases YP_005549150.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005549154.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005549155.1 COG0302 GTP cyclohydrolase I YP_005549158.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005549159.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005549160.1 COG0105 Nucleoside diphosphate kinase YP_005549161.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_005549162.1 COG0082 Chorismate synthase YP_005549163.1 COG0337 3-dehydroquinate synthetase YP_005549164.1 COG4401 Chorismate mutase YP_005549165.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005549166.1 COG0547 Anthranilate phosphoribosyltransferase YP_005549167.1 COG0134 Indole-3-glycerol phosphate synthase YP_005549168.1 COG0135 Phosphoribosylanthranilate isomerase YP_005549169.1 COG0133 Tryptophan synthase beta chain YP_005549170.1 COG0159 Tryptophan synthase alpha chain YP_005549171.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_005549172.1 COG0287 Prephenate dehydrogenase YP_005549173.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005549175.1 COG0457 FOG: TPR repeat YP_005549176.1 COG5582 Uncharacterized conserved protein YP_005549179.1 COG0723 Rieske Fe-S protein YP_005549180.1 COG1290 Cytochrome b subunit of the bc complex YP_005549181.1 COG2010 Cytochrome c, mono- and diheme variants YP_005549182.1 COG4347 Predicted membrane protein YP_005549184.1 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes YP_005549185.1 COG4347 Predicted membrane protein YP_005549186.1 COG1694 Predicted pyrophosphatase YP_005549187.1 COG0289 Dihydrodipicolinate reductase YP_005549188.1 COG1803 Methylglyoxal synthase YP_005549189.1 COG2120 Uncharacterized proteins, LmbE homologs YP_005549190.1 COG0438 Glycosyltransferase YP_005549191.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005549192.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005549193.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005549194.1 COG0414 Panthothenate synthetase YP_005549195.1 COG0853 Aspartate 1-decarboxylase YP_005549196.1 COG1199 Rad3-related DNA helicases YP_005549199.1 COG5353 Uncharacterized protein conserved in bacteria YP_005549200.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005549201.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_005549202.1 COG3935 Putative primosome component and related proteins YP_005549203.1 COG0177 Predicted EndoIII-related endonuclease YP_005549205.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005549206.1 COG3331 Penicillin-binding protein-related factor A, putative recombinase YP_005549215.1 COG2190 Phosphotransferase system IIA components YP_005549216.1 COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster YP_005549217.1 COG3359 Predicted exonuclease YP_005549218.1 COG4474 Uncharacterized protein conserved in bacteria YP_005549219.1 COG3599 Cell division initiation protein YP_005549220.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_005549224.1 COG1199 Rad3-related DNA helicases YP_005549225.1 COG2317 Zn-dependent carboxypeptidase YP_005549226.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005549227.1 COG2233 Xanthine/uracil permeases YP_005549228.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005549229.1 COG1525 Micrococcal nuclease (thermonuclease) homologs YP_005549232.1 COG5444 Uncharacterized conserved protein YP_005549233.1 COG2319 FOG: WD40 repeat YP_005549236.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005549238.1 COG0457 FOG: TPR repeat YP_005549239.1 COG0457 FOG: TPR repeat YP_005549241.1 COG0274 Deoxyribose-phosphate aldolase YP_005549242.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005549246.1 COG4722 Phage-related protein YP_005549248.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005549250.1 COG0515 Serine/threonine protein kinase YP_005549252.1 COG0464 ATPases of the AAA+ class YP_005549253.1 COG0582 Integrase YP_005549256.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005549257.1 COG1536 Flagellar motor switch protein YP_005549260.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005549265.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005549266.1 COG0158 Fructose-1,6-bisphosphatase YP_005549268.1 COG0013 Alanyl-tRNA synthetase YP_005549269.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_005549271.1 COG1372 Intein/homing endonuclease YP_005549277.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005549278.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005549281.1 COG1476 Predicted transcriptional regulators YP_005549282.1 COG0206 Cell division GTPase YP_005549287.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005549288.1 COG0210 Superfamily I DNA and RNA helicases YP_005549289.1 COG3646 Uncharacterized phage-encoded protein YP_005549290.1 COG0328 Ribonuclease HI YP_005549292.1 COG1835 Predicted acyltransferases YP_005549294.1 COG0009 Putative translation factor (SUA5) YP_005549295.1 COG2225 Malate synthase YP_005549296.1 COG1586 S-adenosylmethionine decarboxylase YP_005549297.1 COG0148 Enolase YP_005549299.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_005549301.1 COG1566 Multidrug resistance efflux pump YP_005549306.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005549311.1 COG1396 Predicted transcriptional regulators YP_005549312.1 COG0582 Integrase YP_005549319.1 COG3387 Glucoamylase and related glycosyl hydrolases YP_005549320.1 COG1741 Pirin-related protein YP_005549322.1 COG3646 Uncharacterized phage-encoded protein YP_005549323.1 COG3920 Signal transduction histidine kinase YP_005549325.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_005549326.1 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) YP_005549327.1 COG0863 DNA modification methylase YP_005549329.1 COG0515 Serine/threonine protein kinase YP_005549330.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005549332.1 COG1793 ATP-dependent DNA ligase YP_005549333.1 COG2135 Uncharacterized conserved protein YP_005549336.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005549337.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005549339.1 COG4195 Phage-related replication protein YP_005549341.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_005549347.1 COG0305 Replicative DNA helicase YP_005549348.1 COG0358 DNA primase (bacterial type) YP_005549349.1 COG0608 Single-stranded DNA-specific exonuclease YP_005549350.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_005549351.1 COG3584 Uncharacterized protein conserved in bacteria YP_005549356.1 COG4502 Uncharacterized protein conserved in bacteria YP_005549358.1 COG0270 Site-specific DNA methylase YP_005549361.1 COG2352 Phosphoenolpyruvate carboxylase YP_005549362.1 COG4581 Superfamily II RNA helicase YP_005549368.1 COG0724 RNA-binding proteins (RRM domain) YP_005549370.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005549371.1 COG4728 Uncharacterized protein conserved in bacteria YP_005549374.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005549375.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005549376.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005549378.1 COG0208 Ribonucleotide reductase, beta subunit YP_005549380.1 COG1990 Uncharacterized conserved protein YP_005549381.1 COG0756 dUTPase YP_005549382.1 COG3391 Uncharacterized conserved protein YP_005549383.1 COG0414 Panthothenate synthetase YP_005549384.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005549386.1 COG0207 Thymidylate synthase YP_005549387.1 COG0262 Dihydrofolate reductase YP_005549390.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005549393.1 COG3331 Penicillin-binding protein-related factor A, putative recombinase YP_005549395.1 COG2233 Xanthine/uracil permeases YP_005549396.1 COG1729 Uncharacterized protein conserved in bacteria YP_005549397.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase YP_005549398.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005549400.1 COG3424 Predicted naringenin-chalcone synthase YP_005549401.1 COG1755 Uncharacterized protein conserved in bacteria YP_005549404.1 COG0699 Predicted GTPases (dynamin-related) YP_005549407.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005549409.1 COG0328 Ribonuclease HI YP_005549410.1 COG1738 Uncharacterized conserved protein YP_005549415.1 COG1278 Cold shock proteins YP_005549417.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005549418.1 COG1897 Homoserine trans-succinylase YP_005549420.1 COG0386 Glutathione peroxidase YP_005549421.1 COG1418 Predicted HD superfamily hydrolase YP_005549423.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005549425.1 COG0500 SAM-dependent methyltransferases YP_005549427.1 COG0207 Thymidylate synthase YP_005549428.1 COG0262 Dihydrofolate reductase YP_005549430.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_005549431.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_005549432.1 COG1171 Threonine dehydratase YP_005549434.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005549435.1 COG2755 Lysophospholipase L1 and related esterases YP_005549436.1 COG4698 Uncharacterized protein conserved in bacteria YP_005549437.1 COG1846 Transcriptional regulators YP_005549438.1 COG0225 Peptide methionine sulfoxide reductase YP_005549439.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_005549440.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005549441.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005549442.1 COG0765 ABC-type amino acid transport system, permease component YP_005549444.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005549447.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005549448.1 COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_005549449.1 COG4641 Uncharacterized protein conserved in bacteria YP_005549452.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005549453.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005549456.1 COG3449 DNA gyrase inhibitor YP_005549458.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005549459.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005549460.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005549461.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005549463.1 COG1509 Lysine 2,3-aminomutase YP_005549465.1 COG4479 Uncharacterized protein conserved in bacteria YP_005549466.1 COG0346 Lactoylglutathione lyase and related lyases YP_005549470.1 COG0671 Membrane-associated phospholipid phosphatase YP_005549473.1 COG0813 Purine-nucleoside phosphorylase YP_005549474.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_005549476.1 COG0500 SAM-dependent methyltransferases YP_005549477.1 COG0793 Periplasmic protease YP_005549478.1 COG2188 Transcriptional regulators YP_005549479.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005549480.1 COG5520 O-Glycosyl hydrolase YP_005549481.1 COG0591 Na+/proline symporter YP_005549483.1 COG0346 Lactoylglutathione lyase and related lyases YP_005549484.1 COG0400 Predicted esterase YP_005549485.1 COG0778 Nitroreductase YP_005549486.1 COG1733 Predicted transcriptional regulators YP_005549490.1 COG0071 Molecular chaperone (small heat shock protein) YP_005549491.1 COG2962 Predicted permeases YP_005549492.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005549494.1 COG2120 Uncharacterized proteins, LmbE homologs YP_005549496.1 COG0534 Na+-driven multidrug efflux pump YP_005549498.1 COG1624 Uncharacterized conserved protein YP_005549499.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005549500.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_005549502.1 COG1388 FOG: LysM repeat YP_005549503.1 COG2032 Cu/Zn superoxide dismutase YP_005549504.1 COG0714 MoxR-like ATPases YP_005549505.1 COG4548 Nitric oxide reductase activation protein YP_005549506.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005549507.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005549508.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005549509.1 COG0385 Predicted Na+-dependent transporter YP_005549510.1 COG0733 Na+-dependent transporters of the SNF family YP_005549511.1 COG0605 Superoxide dismutase YP_005549512.1 COG1657 Squalene cyclase YP_005549513.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005549515.1 COG5223 Uncharacterized conserved protein YP_005549519.1 COG0071 Molecular chaperone (small heat shock protein) YP_005549522.1 COG1734 DnaK suppressor protein YP_005549523.1 COG1182 Acyl carrier protein phosphodiesterase YP_005549525.1 COG0514 Superfamily II DNA helicase YP_005549527.1 COG1388 FOG: LysM repeat YP_005549528.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005549529.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005549532.1 COG2322 Predicted membrane protein YP_005549533.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005549535.1 COG0640 Predicted transcriptional regulators YP_005549538.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005549539.1 COG1309 Transcriptional regulator YP_005549540.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005549541.1 COG0073 EMAP domain YP_005549542.1 COG5294 Uncharacterized protein conserved in bacteria YP_005549543.1 COG2064 Flp pilus assembly protein TadC YP_005549544.1 COG1846 Transcriptional regulators YP_005549545.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005549547.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005549548.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005549549.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005549550.1 COG0477 Permeases of the major facilitator superfamily YP_005549552.1 COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain YP_005549553.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005549555.1 COG0345 Pyrroline-5-carboxylate reductase YP_005549556.1 COG0263 Glutamate 5-kinase YP_005549557.1 COG0583 Transcriptional regulator YP_005549558.1 COG0069 Glutamate synthase domain 2 YP_005549559.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_005549560.1 COG2193 Bacterioferritin (cytochrome b1) YP_005549561.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_005549563.1 COG0583 Transcriptional regulator YP_005549565.1 COG0441 Threonyl-tRNA synthetase YP_005549566.1 COG0640 Predicted transcriptional regulators YP_005549567.1 COG2814 Arabinose efflux permease YP_005549568.1 COG0405 Gamma-glutamyltransferase YP_005549570.1 COG0582 Integrase YP_005549573.1 COG0534 Na+-driven multidrug efflux pump YP_005549574.1 COG2017 Galactose mutarotase and related enzymes YP_005549575.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005549577.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005549578.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005549580.1 COG1649 Uncharacterized protein conserved in bacteria YP_005549582.1 COG1960 Acyl-CoA dehydrogenases YP_005549583.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005549584.1 COG0439 Biotin carboxylase YP_005549585.1 COG0511 Biotin carboxyl carrier protein YP_005549586.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_005549587.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005549588.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005549589.1 COG0586 Uncharacterized membrane-associated protein YP_005549590.1 COG1210 UDP-glucose pyrophosphorylase YP_005549591.1 COG2246 Predicted membrane protein YP_005549592.1 COG1424 Pimeloyl-CoA synthetase YP_005549593.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005549594.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005549595.1 COG0132 Dethiobiotin synthetase YP_005549596.1 COG0502 Biotin synthase and related enzymes YP_005549597.1 COG2124 Cytochrome P450 YP_005549598.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005549599.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005549600.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005549603.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005549604.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005549605.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005549607.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005549610.1 COG5520 O-Glycosyl hydrolase YP_005549611.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005549612.1 COG0642 Signal transduction histidine kinase YP_005549614.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005549619.1 COG1115 Na+/alanine symporter YP_005549622.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005549623.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005549625.1 COG1832 Predicted CoA-binding protein YP_005549626.1 COG0344 Predicted membrane protein YP_005549627.1 COG4841 Uncharacterized protein conserved in bacteria YP_005549629.1 COG0824 Predicted thioesterase YP_005549630.1 COG0840 Methyl-accepting chemotaxis protein YP_005549633.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005549634.1 COG1048 Aconitase A YP_005549637.1 COG0071 Molecular chaperone (small heat shock protein) YP_005549639.1 COG4846 Membrane protein involved in cytochrome C biogenesis YP_005549640.1 COG0784 FOG: CheY-like receiver YP_005549641.1 COG0785 Cytochrome c biogenesis protein YP_005549643.1 COG3763 Uncharacterized protein conserved in bacteria YP_005549645.1 COG0021 Transketolase YP_005549646.1 COG4224 Uncharacterized protein conserved in bacteria YP_005549647.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005549648.1 COG1388 FOG: LysM repeat YP_005549649.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_005549652.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005549654.1 COG4195 Phage-related replication protein YP_005549656.1 COG0756 dUTPase YP_005549657.1 COG2314 Predicted membrane protein YP_005549661.1 COG3397 Uncharacterized protein conserved in bacteria YP_005549663.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005549668.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005549670.1 COG0471 Di- and tricarboxylate transporters YP_005549674.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005549675.1 COG2318 Uncharacterized protein conserved in bacteria YP_005549678.1 COG0457 FOG: TPR repeat YP_005549679.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005549680.1 COG1309 Transcriptional regulator YP_005549681.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005549682.1 COG2314 Predicted membrane protein YP_005549683.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005549684.1 COG2115 Xylose isomerase YP_005549685.1 COG1940 Transcriptional regulator/sugar kinase YP_005549686.1 COG3507 Beta-xylosidase YP_005549687.1 COG2211 Na+/melibiose symporter and related transporters YP_005549688.1 COG5253 Phosphatidylinositol-4-phosphate 5-kinase YP_005549689.1 COG2124 Cytochrome P450 YP_005549690.1 COG5444 Uncharacterized conserved protein YP_005549692.1 COG3028 Uncharacterized protein conserved in bacteria YP_005549693.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005549695.1 COG0174 Glutamine synthetase YP_005549696.1 COG0789 Predicted transcriptional regulators YP_005549697.1 COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance YP_005549698.1 COG2262 GTPases YP_005549699.1 COG0464 ATPases of the AAA+ class YP_005549701.1 COG4112 Predicted phosphoesterase (MutT family) YP_005549702.1 COG0208 Ribonucleotide reductase, beta subunit YP_005549703.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005549704.1 COG1780 Protein involved in ribonucleotide reduction YP_005549707.1 COG1923 Uncharacterized host factor I protein YP_005549708.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005549711.1 COG2076 Membrane transporters of cations and cationic drugs YP_005549712.1 COG2076 Membrane transporters of cations and cationic drugs YP_005549713.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005549714.1 COG4195 Phage-related replication protein YP_005549718.1 COG1404 Subtilisin-like serine proteases YP_005549721.1 COG3619 Predicted membrane protein YP_005549723.1 COG2124 Cytochrome P450 YP_005549724.1 COG3321 Polyketide synthase modules and related proteins YP_005549725.1 COG3321 Polyketide synthase modules and related proteins YP_005549726.1 COG3321 Polyketide synthase modules and related proteins YP_005549727.1 COG3321 Polyketide synthase modules and related proteins YP_005549728.1 COG3321 Polyketide synthase modules and related proteins YP_005549729.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005549730.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005549731.1 COG3425 3-hydroxy-3-methylglutaryl CoA synthase YP_005549732.1 COG0236 Acyl carrier protein YP_005549733.1 COG0236 Acyl carrier protein YP_005549734.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005549735.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005549737.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005549738.1 COG0249 Mismatch repair ATPase (MutS family) YP_005549740.1 COG4550 Predicted membrane protein YP_005549741.1 COG0621 2-methylthioadenine synthetase YP_005549742.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005549743.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_005549744.1 COG2359 Uncharacterized protein conserved in bacteria YP_005549745.1 COG1692 Uncharacterized protein conserved in bacteria YP_005549746.1 COG1418 Predicted HD superfamily hydrolase YP_005549747.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005549748.1 COG0468 RecA/RadA recombinase YP_005549749.1 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA YP_005549750.1 COG0558 Phosphatidylglycerophosphate synthase YP_005549751.1 COG1426 Uncharacterized protein conserved in bacteria YP_005549754.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005549755.1 COG0612 Predicted Zn-dependent peptidases YP_005549756.1 COG0612 Predicted Zn-dependent peptidases YP_005549757.1 COG2409 Predicted drug exporters of the RND superfamily YP_005549758.1 COG1846 Transcriptional regulators YP_005549759.1 COG0477 Permeases of the major facilitator superfamily YP_005549760.1 COG2188 Transcriptional regulators YP_005549761.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005549763.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005549764.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005549765.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005549766.1 COG0527 Aspartokinases YP_005549767.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005549768.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005549770.1 COG1873 Uncharacterized conserved protein YP_005549771.1 COG0612 Predicted Zn-dependent peptidases YP_005549772.1 COG0726 Predicted xylanase/chitin deacetylase YP_005549773.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005549774.1 COG0196 FAD synthase YP_005549775.1 COG0130 Pseudouridine synthase YP_005549776.1 COG0858 Ribosome-binding factor A YP_005549777.1 COG1550 Uncharacterized protein conserved in bacteria YP_005549778.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005549779.1 COG1358 Ribosomal protein HS6-type (S12/L30/L7a) YP_005549780.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_005549781.1 COG0195 Transcription elongation factor YP_005549782.1 COG0779 Uncharacterized protein conserved in bacteria YP_005549783.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_005549784.1 COG0442 Prolyl-tRNA synthetase YP_005549785.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005549786.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005549787.1 COG0575 CDP-diglyceride synthetase YP_005549788.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005549789.1 COG0233 Ribosome recycling factor YP_005549790.1 COG0528 Uridylate kinase YP_005549791.1 COG0264 Translation elongation factor Ts YP_005549792.1 COG0052 Ribosomal protein S2 YP_005549794.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005549795.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_005549796.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005549797.1 COG0835 Chemotaxis signal transduction protein YP_005549798.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_005549799.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_005549800.1 COG0455 ATPases involved in chromosome partitioning YP_005549801.1 COG1419 Flagellar GTP-binding protein YP_005549802.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005549803.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005549804.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005549805.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005549806.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_005549807.1 COG3190 Flagellar biogenesis protein YP_005549808.1 COG0784 FOG: CheY-like receiver YP_005549809.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005549810.1 COG1868 Flagellar motor switch protein YP_005549811.1 COG1580 Flagellar basal body-associated protein YP_005549812.1 COG1582 Uncharacterized protein, possibly involved in motility YP_005549813.1 COG1582 Uncharacterized protein, possibly involved in motility YP_005549814.1 COG1843 Flagellar hook capping protein YP_005549815.1 COG3144 Flagellar hook-length control protein YP_005549816.1 COG3334 Uncharacterized conserved protein YP_005549817.1 COG2882 Flagellar biosynthesis chaperone YP_005549818.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005549819.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005549820.1 COG1536 Flagellar motor switch protein YP_005549821.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_005549822.1 COG1677 Flagellar hook-basal body protein YP_005549823.1 COG1558 Flagellar basal body rod protein YP_005549824.1 COG1815 Flagellar basal body protein YP_005549825.1 COG4465 Pleiotropic transcriptional repressor YP_005549826.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005549827.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005549828.1 COG4974 Site-specific recombinase XerD YP_005549829.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005549830.1 COG0550 Topoisomerase IA YP_005549831.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005549832.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005549833.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005549834.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_005549836.1 COG0164 Ribonuclease HII YP_005549837.1 COG1161 Predicted GTPases YP_005549839.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005549840.1 COG0806 RimM protein, required for 16S rRNA processing YP_005549842.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_005549843.1 COG0228 Ribosomal protein S16 YP_005549844.1 COG0541 Signal recognition particle GTPase YP_005549845.1 COG2739 Uncharacterized protein conserved in bacteria YP_005549846.1 COG0552 Signal recognition particle GTPase YP_005549847.1 COG1196 Chromosome segregation ATPases YP_005549848.1 COG0571 dsRNA-specific ribonuclease YP_005549849.1 COG0236 Acyl carrier protein YP_005549850.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005549851.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005549852.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005549853.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005549854.1 COG1200 RecG-like helicase YP_005549855.1 COG1760 L-serine deaminase YP_005549856.1 COG1760 L-serine deaminase YP_005549857.1 COG1461 Predicted kinase related to dihydroxyacetone kinase YP_005549858.1 COG1302 Uncharacterized protein conserved in bacteria YP_005549859.1 COG0227 Ribosomal protein L28 YP_005549861.1 COG1564 Thiamine pyrophosphokinase YP_005549862.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005549863.1 COG1162 Predicted GTPases YP_005549864.1 COG0515 Serine/threonine protein kinase YP_005549865.1 COG0631 Serine/threonine protein phosphatase YP_005549866.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005549867.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_005549868.1 COG0223 Methionyl-tRNA formyltransferase YP_005549869.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005549870.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005549871.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005549872.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005549873.1 COG0194 Guanylate kinase YP_005549874.1 COG2052 Uncharacterized protein conserved in bacteria YP_005549875.1 COG1561 Uncharacterized stress-induced protein YP_005549876.1 COG0474 Cation transport ATPase YP_005549877.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_005549878.1 COG0366 Glycosidases YP_005549879.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_005549880.1 COG2138 Uncharacterized conserved protein YP_005549881.1 COG0007 Uroporphyrinogen-III methylase YP_005549882.1 COG0529 Adenylylsulfate kinase and related kinases YP_005549883.1 COG2046 ATP sulfurylase (sulfate adenylyltransferase) YP_005549884.1 COG0306 Phosphate/sulphate permeases YP_005549885.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_005549886.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005549887.1 COG0461 Orotate phosphoribosyltransferase YP_005549888.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005549889.1 COG0167 Dihydroorotate dehydrogenase YP_005549890.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_005549891.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005549892.1 COG0505 Carbamoylphosphate synthase small subunit YP_005549893.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005549894.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005549895.1 COG2233 Xanthine/uracil permeases YP_005549897.1 COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase YP_005549898.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005549899.1 COG0597 Lipoprotein signal peptidase YP_005549900.1 COG1734 DnaK suppressor protein YP_005549901.1 COG0060 Isoleucyl-tRNA synthetase YP_005549902.1 COG3599 Cell division initiation protein YP_005549903.1 COG2302 Uncharacterized conserved protein, contains S4-like domain YP_005549904.1 COG0762 Predicted integral membrane protein YP_005549905.1 COG1799 Uncharacterized protein conserved in bacteria YP_005549906.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005549907.1 COG1496 Uncharacterized conserved protein YP_005549908.1 COG1873 Uncharacterized conserved protein YP_005549909.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005549911.1 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA YP_005549912.1 COG0500 SAM-dependent methyltransferases YP_005549913.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005549914.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005549916.1 COG4412 Uncharacterized protein conserved in bacteria YP_005549917.1 COG0206 Cell division GTPase YP_005549918.1 COG0849 Actin-like ATPase involved in cell division YP_005549921.1 COG1589 Cell division septal protein YP_005549923.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005549924.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005549925.1 COG0772 Bacterial cell division membrane protein YP_005549926.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005549927.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005549928.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005549929.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005549930.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005549931.1 COG4839 Protein required for the initiation of cell division YP_005549932.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005549933.1 COG2001 Uncharacterized protein conserved in bacteria YP_005549934.1 COG4365 Uncharacterized protein conserved in bacteria YP_005549935.1 COG1893 Ketopantoate reductase YP_005549936.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005549938.1 COG0333 Ribosomal protein L32 YP_005549939.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_005549940.1 COG1323 Predicted nucleotidyltransferase YP_005549941.1 COG3480 Predicted secreted protein containing a PDZ domain YP_005549942.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005549943.1 COG3314 Uncharacterized protein conserved in bacteria YP_005549944.1 COG0669 Phosphopantetheine adenylyltransferase YP_005549945.1 COG0742 N6-adenine-specific methylase YP_005549947.1 COG4471 Uncharacterized protein conserved in bacteria YP_005549948.1 COG3679 Uncharacterized conserved protein YP_005549951.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_005549952.1 COG0517 FOG: CBS domain YP_005549954.1 COG3336 Predicted membrane protein YP_005549955.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_005549956.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005549957.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005549958.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005549960.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005549961.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_005549962.1 COG1038 Pyruvate carboxylase YP_005549963.1 COG0772 Bacterial cell division membrane protein YP_005549964.1 COG4838 Uncharacterized protein conserved in bacteria YP_005549965.1 COG2066 Glutaminase YP_005549967.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_005549969.1 COG4896 Uncharacterized protein conserved in bacteria YP_005549971.1 COG1217 Predicted membrane GTPase involved in stress response YP_005549974.1 COG5660 Predicted integral membrane protein YP_005549976.1 COG3227 Zinc metalloprotease (elastase) YP_005549978.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005549980.1 COG4493 Uncharacterized protein conserved in bacteria YP_005549981.1 COG4476 Uncharacterized protein conserved in bacteria YP_005549983.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_005549985.1 COG0726 Predicted xylanase/chitin deacetylase YP_005549987.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005549988.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005549989.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005549990.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005549993.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005549994.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005549995.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005549996.1 COG5503 Uncharacterized conserved small protein YP_005549997.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005549998.1 COG1001 Adenine deaminase YP_005549999.1 COG0569 K+ transport systems, NAD-binding component YP_005550000.1 COG3703 Uncharacterized protein involved in cation transport YP_005550001.1 COG0642 Signal transduction histidine kinase YP_005550002.1 COG2002 Regulators of stationary/sporulation gene expression YP_005550003.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005550005.1 COG2309 Leucyl aminopeptidase (aminopeptidase T) YP_005550006.1 COG1893 Ketopantoate reductase YP_005550007.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005550009.1 COG0681 Signal peptidase I YP_005550010.1 COG1299 Phosphotransferase system, fructose-specific IIC component YP_005550011.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) YP_005550012.1 COG1349 Transcriptional regulators of sugar metabolism YP_005550013.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005550014.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005550015.1 COG0845 Membrane-fusion protein YP_005550018.1 COG1977 Molybdopterin converting factor, small subunit YP_005550019.1 COG0314 Molybdopterin converting factor, large subunit YP_005550020.1 COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein YP_005550021.1 COG0303 Molybdopterin biosynthesis enzyme YP_005550022.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005550023.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_005550027.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005550028.1 COG0450 Peroxiredoxin YP_005550029.1 COG0668 Small-conductance mechanosensitive channel YP_005550031.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005550032.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005550033.1 COG0716 Flavodoxins YP_005550035.1 COG0716 Flavodoxins YP_005550036.1 COG0583 Transcriptional regulator YP_005550037.1 COG0517 FOG: CBS domain YP_005550039.1 COG1978 Uncharacterized protein conserved in bacteria YP_005550040.1 COG4703 Uncharacterized protein conserved in bacteria YP_005550041.1 COG2200 FOG: EAL domain YP_005550043.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005550044.1 COG1408 Predicted phosphohydrolases YP_005550045.1 COG1376 Uncharacterized protein conserved in bacteria YP_005550046.1 COG0477 Permeases of the major facilitator superfamily YP_005550048.1 COG0835 Chemotaxis signal transduction protein YP_005550049.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_005550050.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005550051.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005550052.1 COG2202 FOG: PAS/PAC domain YP_005550053.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005550054.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_005550055.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005550056.1 COG0840 Methyl-accepting chemotaxis protein YP_005550057.1 COG1533 DNA repair photolyase YP_005550059.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_005550060.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005550061.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005550062.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005550063.1 COG3711 Transcriptional antiterminator YP_005550064.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005550065.1 COG1609 Transcriptional regulators YP_005550067.1 COG0006 Xaa-Pro aminopeptidase YP_005550068.1 COG2217 Cation transport ATPase YP_005550069.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005550070.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005550071.1 COG3773 Cell wall hydrolyses involved in spore germination YP_005550073.1 COG4873 Uncharacterized protein conserved in bacteria YP_005550075.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_005550076.1 COG0602 Organic radical activating enzymes YP_005550077.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005550078.1 COG0603 Predicted PP-loop superfamily ATPase YP_005550079.1 COG0060 Isoleucyl-tRNA synthetase YP_005550082.1 COG3949 Uncharacterized membrane protein YP_005550083.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005550085.1 COG1291 Flagellar motor component YP_005550086.1 COG1360 Flagellar motor protein YP_005550087.1 COG1846 Transcriptional regulators YP_005550089.1 COG0642 Signal transduction histidine kinase YP_005550091.1 COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005550092.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005550093.1 COG4359 Uncharacterized conserved protein, possibly involved in methylthioadenosine recycling YP_005550094.1 COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit YP_005550095.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005550096.1 COG0388 Predicted amidohydrolase YP_005550097.1 COG4857 Predicted kinase YP_005550098.1 COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family YP_005550100.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005550101.1 COG0642 Signal transduction histidine kinase YP_005550102.1 COG3594 Fucose 4-O-acetylase and related acetyltransferases YP_005550104.1 COG2323 Predicted membrane protein YP_005550105.1 COG0168 Trk-type K+ transport systems, membrane components YP_005550106.1 COG0501 Zn-dependent protease with chaperone function YP_005550110.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005550111.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005550112.1 COG0586 Uncharacterized membrane-associated protein YP_005550113.1 COG2200 FOG: EAL domain YP_005550114.1 COG1273 Uncharacterized conserved protein YP_005550115.1 COG3285 Predicted eukaryotic-type DNA primase YP_005550118.1 COG1846 Transcriptional regulators YP_005550120.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005550122.1 COG0789 Predicted transcriptional regulators YP_005550123.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005550125.1 COG3858 Predicted glycosyl hydrolase YP_005550127.1 COG4721 Predicted membrane protein YP_005550128.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005550129.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters YP_005550131.1 COG1404 Subtilisin-like serine proteases YP_005550132.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005550133.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_005550134.1 COG0477 Permeases of the major facilitator superfamily YP_005550135.1 COG0590 Cytosine/adenosine deaminases YP_005550137.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005550138.1 COG1244 Predicted Fe-S oxidoreductase YP_005550140.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005550141.1 COG1846 Transcriptional regulators YP_005550142.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_005550143.1 COG0014 Gamma-glutamyl phosphate reductase YP_005550144.1 COG0263 Glutamate 5-kinase YP_005550145.1 COG0788 Formyltetrahydrofolate hydrolase YP_005550146.1 COG2076 Membrane transporters of cations and cationic drugs YP_005550147.1 COG2076 Membrane transporters of cations and cationic drugs YP_005550148.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005550149.1 COG1607 Acyl-CoA hydrolase YP_005550151.1 COG1834 N-Dimethylarginine dimethylaminohydrolase YP_005550152.1 COG2706 3-carboxymuconate cyclase YP_005550153.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005550154.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005550155.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005550156.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005550157.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005550158.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005550159.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005550160.1 COG2362 D-aminopeptidase YP_005550161.1 COG0477 Permeases of the major facilitator superfamily YP_005550162.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005550164.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005550165.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_005550166.1 COG0346 Lactoylglutathione lyase and related lyases YP_005550167.1 COG0531 Amino acid transporters YP_005550168.1 COG1392 Phosphate transport regulator (distant homolog of PhoU) YP_005550169.1 COG0306 Phosphate/sulphate permeases YP_005550173.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005550182.1 COG3299 Uncharacterized homolog of phage Mu protein gp47 YP_005550186.1 COG1652 Uncharacterized protein containing LysM domain YP_005550199.1 COG5518 Bacteriophage capsid portal protein YP_005550200.1 COG1783 Phage terminase, large subunit YP_005550201.1 COG3728 Phage terminase, small subunit YP_005550202.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_005550206.1 COG0009 Putative translation factor (SUA5) YP_005550207.1 COG1484 DNA replication protein YP_005550210.1 COG1396 Predicted transcriptional regulators YP_005550211.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_005550213.1 COG4195 Phage-related replication protein YP_005550215.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005550217.1 COG0457 FOG: TPR repeat YP_005550218.1 COG1204 Superfamily II helicase YP_005550219.1 COG2318 Uncharacterized protein conserved in bacteria YP_005550220.1 COG0730 Predicted permeases YP_005550221.1 COG1115 Na+/alanine symporter YP_005550222.1 COG0642 Signal transduction histidine kinase YP_005550223.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005550224.1 COG2721 Altronate dehydratase YP_005550225.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_005550226.1 COG1609 Transcriptional regulators YP_005550227.1 COG1904 Glucuronate isomerase YP_005550228.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_005550229.1 COG2427 Uncharacterized conserved protein YP_005550231.1 COG4297 Uncharacterized protein containing double-stranded beta helix domain YP_005550233.1 COG1117 ABC-type phosphate transport system, ATPase component YP_005550234.1 COG0390 ABC-type uncharacterized transport system, permease component YP_005550235.1 COG1587 Uroporphyrinogen-III synthase YP_005550236.1 COG0551 Zn-finger domain associated with topoisomerase type I YP_005550237.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_005550238.1 COG2124 Cytochrome P450 YP_005550239.1 COG2427 Uncharacterized conserved protein YP_005550240.1 COG3383 Uncharacterized anaerobic dehydrogenase YP_005550244.1 COG1285 Uncharacterized membrane protein YP_005550245.1 COG1846 Transcriptional regulators YP_005550247.1 COG0637 Predicted phosphatase/phosphohexomutase YP_005550248.1 COG1349 Transcriptional regulators of sugar metabolism YP_005550249.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005550250.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_005550251.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005550252.1 COG4468 Galactose-1-phosphate uridyltransferase YP_005550253.1 COG3867 Arabinogalactan endo-1,4-beta-galactosidase YP_005550254.1 COG1846 Transcriptional regulators YP_005550255.1 COG0477 Permeases of the major facilitator superfamily YP_005550256.1 COG1359 Uncharacterized conserved protein YP_005550257.1 COG2367 Beta-lactamase class A YP_005550258.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_005550261.1 COG5492 Bacterial surface proteins containing Ig-like domains YP_005550263.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005550271.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005550273.1 COG1893 Ketopantoate reductase YP_005550275.1 COG0582 Integrase YP_005550277.1 COG0527 Aspartokinases YP_005550278.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005550280.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_005550282.1 COG5444 Uncharacterized conserved protein YP_005550285.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005550288.1 COG0038 Chloride channel protein EriC YP_005550289.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005550296.1 COG3299 Uncharacterized homolog of phage Mu protein gp47 YP_005550302.1 COG3953 SLT domain proteins YP_005550310.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_005550311.1 COG2369 Uncharacterized protein, homolog of phage Mu protein gp30 YP_005550312.1 COG0130 Pseudouridine synthase YP_005550314.1 COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster YP_005550318.1 COG5484 Uncharacterized conserved protein YP_005550319.1 COG2164 Uncharacterized conserved protein YP_005550324.1 COG1856 Uncharacterized homolog of biotin synthetase YP_005550325.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005550326.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_005550327.1 COG0500 SAM-dependent methyltransferases YP_005550331.1 COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain YP_005550332.1 COG0681 Signal peptidase I YP_005550337.1 COG4570 Holliday junction resolvase YP_005550339.1 COG1484 DNA replication protein YP_005550342.1 COG1452 Organic solvent tolerance protein OstA YP_005550347.1 COG1396 Predicted transcriptional regulators YP_005550348.1 COG1396 Predicted transcriptional regulators YP_005550349.1 COG1525 Micrococcal nuclease (thermonuclease) homologs YP_005550352.1 COG0582 Integrase YP_005550353.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005550354.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005550355.1 COG2382 Enterochelin esterase and related enzymes YP_005550356.1 COG1514 2'-5' RNA ligase YP_005550357.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005550358.1 COG2002 Regulators of stationary/sporulation gene expression YP_005550359.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005550360.1 COG0842 ABC-type multidrug transport system, permease component YP_005550361.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005550362.1 COG3728 Phage terminase, small subunit YP_005550363.1 COG0210 Superfamily I DNA and RNA helicases YP_005550375.1 COG0623 Enoyl-[acyl-carrier-protein YP_005550376.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005550377.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005550378.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_005550379.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_005550380.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005550381.1 COG0352 Thiamine monophosphate synthase YP_005550382.1 COG0819 Putative transcription activator YP_005550383.1 COG0475 Kef-type K+ transport systems, membrane components YP_005550385.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_005550386.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005550387.1 COG0061 Predicted sugar kinase YP_005550388.1 COG2357 Uncharacterized protein conserved in bacteria YP_005550390.1 COG4116 Uncharacterized protein conserved in bacteria YP_005550391.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005550392.1 COG2346 Truncated hemoglobins YP_005550393.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_005550395.1 COG1164 Oligoendopeptidase F YP_005550396.1 COG4469 Competence protein YP_005550398.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005550399.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005550401.1 COG1306 Uncharacterized conserved protein YP_005550402.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005550403.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005550404.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005550405.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005550406.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005550407.1 COG0180 Tryptophanyl-tRNA synthetase YP_005550409.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005550410.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005550411.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005550412.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005550413.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005550414.1 COG5504 Predicted Zn-dependent protease YP_005550415.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005550416.1 COG0332 3-oxoacyl-[acyl-carrier-protein YP_005550419.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein YP_005550424.1 COG0078 Ornithine carbamoyltransferase YP_005550425.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005550426.1 COG0505 Carbamoylphosphate synthase small subunit YP_005550427.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005550428.1 COG0548 Acetylglutamate kinase YP_005550429.1 COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) YP_005550430.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_005550431.1 COG0477 Permeases of the major facilitator superfamily YP_005550432.1 COG0277 FAD/FMN-containing dehydrogenases YP_005550433.1 COG1015 Phosphopentomutase YP_005550434.1 COG4974 Site-specific recombinase XerD YP_005550436.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005550437.1 COG1300 Uncharacterized membrane protein YP_005550440.1 COG0281 Malic enzyme YP_005550441.1 COG1757 Na+/H+ antiporter YP_005550442.1 COG1027 Aspartate ammonia-lyase YP_005550443.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_005550444.1 COG1396 Predicted transcriptional regulators YP_005550445.1 COG1379 Uncharacterized conserved protein YP_005550446.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005550448.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005550450.1 COG1073 Hydrolases of the alpha/beta superfamily YP_005550452.1 COG4918 Uncharacterized protein conserved in bacteria YP_005550453.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005550455.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005550456.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005550459.1 COG0628 Predicted permease YP_005550461.1 COG1072 Panthothenate kinase YP_005550462.1 COG3048 D-serine dehydratase YP_005550463.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_005550464.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005550465.1 COG0345 Pyrroline-5-carboxylate reductase YP_005550466.1 COG3210 Large exoproteins involved in heme utilization or adhesion YP_005550467.1 COG0583 Transcriptional regulator YP_005550468.1 COG3136 Uncharacterized membrane protein required for alginate biosynthesis YP_005550469.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005550470.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005550472.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_005550473.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005550475.1 COG0362 6-phosphogluconate dehydrogenase YP_005550476.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005550477.1 COG2200 FOG: EAL domain YP_005550478.1 COG0706 Preprotein translocase subunit YidC YP_005550479.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005550480.1 COG0346 Lactoylglutathione lyase and related lyases YP_005550481.1 COG1376 Uncharacterized protein conserved in bacteria YP_005550482.1 COG4129 Predicted membrane protein YP_005550483.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005550484.1 COG0765 ABC-type amino acid transport system, permease component YP_005550485.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005550487.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_005550488.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005550489.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005550490.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005550491.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005550492.1 COG3426 Butyrate kinase YP_005550493.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005550494.1 COG0280 Phosphotransacetylase YP_005550495.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_005550497.1 COG2513 PEP phosphonomutase and related enzymes YP_005550498.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_005550499.1 COG0372 Citrate synthase YP_005550500.1 COG1960 Acyl-CoA dehydrogenases YP_005550501.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005550502.1 COG0183 Acetyl-CoA acetyltransferase YP_005550503.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005550504.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005550507.1 COG1971 Predicted membrane protein YP_005550508.1 COG3339 Uncharacterized conserved protein YP_005550511.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_005550514.1 COG0787 Alanine racemase YP_005550516.1 COG0784 FOG: CheY-like receiver YP_005550517.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005550518.1 COG0497 ATPase involved in DNA repair YP_005550519.1 COG1438 Arginine repressor YP_005550520.1 COG1189 Predicted rRNA methylase YP_005550521.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005550522.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005550523.1 COG1722 Exonuclease VII small subunit YP_005550524.1 COG1570 Exonuclease VII, large subunit YP_005550525.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005550526.1 COG0781 Transcription termination factor YP_005550528.1 COG1302 Uncharacterized protein conserved in bacteria YP_005550529.1 COG0439 Biotin carboxylase YP_005550530.1 COG0511 Biotin carboxyl carrier protein YP_005550538.1 COG3854 Uncharacterized protein conserved in bacteria YP_005550540.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005550541.1 COG0006 Xaa-Pro aminopeptidase YP_005550543.1 COG3872 Predicted metal-dependent enzyme YP_005550545.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005550546.1 COG1321 Mn-dependent transcriptional regulator YP_005550547.1 COG0095 Lipoate-protein ligase A YP_005550549.1 COG0607 Rhodanese-related sulfurtransferase YP_005550550.1 COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain YP_005550551.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_005550552.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_005550553.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005550557.1 COG1396 Predicted transcriptional regulators YP_005550559.1 COG0681 Signal peptidase I YP_005550564.1 COG4940 Competence protein ComGF YP_005550566.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_005550567.1 COG4537 Competence protein ComGC YP_005550568.1 COG1459 Type II secretory pathway, component PulF YP_005550569.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_005550570.1 COG0775 Nucleoside phosphorylase YP_005550571.1 COG0598 Mg2+ and Co2+ transporters YP_005550572.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005550573.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005550574.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005550576.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005550578.1 COG0011 Uncharacterized conserved protein YP_005550579.1 COG2866 Predicted carboxypeptidase YP_005550580.1 COG1940 Transcriptional regulator/sugar kinase YP_005550581.1 COG4483 Uncharacterized protein conserved in bacteria YP_005550582.1 COG1757 Na+/H+ antiporter YP_005550584.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005550589.1 COG1117 ABC-type phosphate transport system, ATPase component YP_005550590.1 COG1117 ABC-type phosphate transport system, ATPase component YP_005550591.1 COG0581 ABC-type phosphate transport system, permease component YP_005550592.1 COG0573 ABC-type phosphate transport system, permease component YP_005550593.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_005550594.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005550595.1 COG0477 Permeases of the major facilitator superfamily YP_005550596.1 COG0605 Superoxide dismutase YP_005550598.1 COG2839 Uncharacterized protein conserved in bacteria YP_005550601.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005550603.1 COG5663 Uncharacterized conserved protein YP_005550604.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005550605.1 COG1284 Uncharacterized conserved protein YP_005550607.1 COG0648 Endonuclease IV YP_005550608.1 COG0513 Superfamily II DNA and RNA helicases YP_005550610.1 COG0761 Penicillin tolerance protein YP_005550611.1 COG0327 Uncharacterized conserved protein YP_005550612.1 COG2384 Predicted SAM-dependent methyltransferase YP_005550613.1 COG2010 Cytochrome c, mono- and diheme variants YP_005550614.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005550616.1 COG0358 DNA primase (bacterial type) YP_005550617.1 COG1671 Uncharacterized protein conserved in bacteria YP_005550618.1 COG1806 Uncharacterized protein conserved in bacteria YP_005550619.1 COG0517 FOG: CBS domain YP_005550620.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005550621.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005550622.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_005550624.1 COG1159 GTPase YP_005550625.1 COG0295 Cytidine deaminase YP_005550626.1 COG0818 Diacylglycerol kinase YP_005550627.1 COG0319 Predicted metal-dependent hydrolase YP_005550628.1 COG1480 Predicted membrane-associated HD superfamily hydrolase YP_005550629.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_005550633.1 COG4864 Uncharacterized protein conserved in bacteria YP_005550634.1 COG1030 Membrane-bound serine protease (ClpP class) YP_005550635.1 COG1610 Uncharacterized conserved protein YP_005550636.1 COG0828 Ribosomal protein S21 YP_005550637.1 COG1283 Na+/phosphate symporter YP_005550638.1 COG0621 2-methylthioadenine synthetase YP_005550639.1 COG1385 Uncharacterized protein conserved in bacteria YP_005550640.1 COG2264 Ribosomal protein L11 methylase YP_005550641.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005550642.1 COG0443 Molecular chaperone YP_005550643.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005550644.1 COG1420 Transcriptional regulator of heat shock gene YP_005550645.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005550646.1 COG0481 Membrane GTPase LepA YP_005550650.1 COG0268 Ribosomal protein S20 YP_005550651.1 COG1466 DNA polymerase III, delta subunit YP_005550653.1 COG0658 Predicted membrane metal-binding protein YP_005550654.1 COG2131 Deoxycytidylate deaminase YP_005550655.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_005550656.1 COG0345 Pyrroline-5-carboxylate reductase YP_005550657.1 COG0500 SAM-dependent methyltransferases YP_005550658.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005550659.1 COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism YP_005550660.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005550661.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_005550662.1 COG0169 Shikimate 5-dehydrogenase YP_005550663.1 COG1161 Predicted GTPases YP_005550664.1 COG2179 Predicted hydrolase of the HAD superfamily YP_005550667.1 COG2755 Lysophospholipase L1 and related esterases YP_005550668.1 COG0726 Predicted xylanase/chitin deacetylase YP_005550669.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005550670.1 COG0398 Uncharacterized conserved protein YP_005550671.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005550672.1 COG0477 Permeases of the major facilitator superfamily YP_005550674.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005550678.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005550679.1 COG0563 Adenylate kinase and related kinases YP_005550682.1 COG0477 Permeases of the major facilitator superfamily YP_005550683.1 COG2318 Uncharacterized protein conserved in bacteria YP_005550684.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005550685.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005550686.1 COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains YP_005550687.1 COG1737 Transcriptional regulators YP_005550688.1 COG1482 Phosphomannose isomerase YP_005550689.1 COG1299 Phosphotransferase system, fructose-specific IIC component YP_005550690.1 COG3711 Transcriptional antiterminator YP_005550692.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005550693.1 COG2606 Uncharacterized conserved protein YP_005550696.1 COG0583 Transcriptional regulator YP_005550697.1 COG0477 Permeases of the major facilitator superfamily YP_005550698.1 COG2124 Cytochrome P450 YP_005550699.1 COG1309 Transcriptional regulator YP_005550701.1 COG0500 SAM-dependent methyltransferases YP_005550702.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005550704.1 COG2116 Formate/nitrite family of transporters YP_005550705.1 COG5609 Uncharacterized conserved protein YP_005550706.1 COG3383 Uncharacterized anaerobic dehydrogenase YP_005550707.1 COG2427 Uncharacterized conserved protein YP_005550709.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005550710.1 COG0031 Cysteine synthase YP_005550711.1 COG0775 Nucleoside phosphorylase YP_005550712.1 COG0500 SAM-dependent methyltransferases YP_005550715.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005550716.1 COG0782 Transcription elongation factor YP_005550717.1 COG0572 Uridine kinase YP_005550718.1 COG0826 Collagenase and related proteases YP_005550719.1 COG0826 Collagenase and related proteases YP_005550720.1 COG4122 Predicted O-methyltransferase YP_005550721.1 COG1559 Predicted periplasmic solute-binding protein YP_005550722.1 COG3906 Uncharacterized protein conserved in bacteria YP_005550723.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005550724.1 COG4472 Uncharacterized protein conserved in bacteria YP_005550725.1 COG0013 Alanyl-tRNA synthetase YP_005550726.1 COG0628 Predicted permease YP_005550727.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005550728.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005550729.1 COG0765 ABC-type amino acid transport system, permease component YP_005550730.1 COG0765 ABC-type amino acid transport system, permease component YP_005550733.1 COG3881 Uncharacterized protein conserved in bacteria YP_005550734.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005550735.1 COG0457 FOG: TPR repeat YP_005550736.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005550737.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005550738.1 COG1959 Predicted transcriptional regulator YP_005550740.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_005550742.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_005550743.1 COG0173 Aspartyl-tRNA synthetase YP_005550744.1 COG0124 Histidyl-tRNA synthetase YP_005550747.1 COG3103 SH3 domain protein YP_005550748.1 COG1490 D-Tyr-tRNAtyr deacylase YP_005550749.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005550750.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005550751.1 COG0608 Single-stranded DNA-specific exonuclease YP_005550752.1 COG5416 Uncharacterized integral membrane protein YP_005550753.1 COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels YP_005550754.1 COG0342 Preprotein translocase subunit SecD YP_005550756.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005550757.1 COG2323 Predicted membrane protein YP_005550759.1 COG1862 Preprotein translocase subunit YajC YP_005550760.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005550761.1 COG2017 Galactose mutarotase and related enzymes YP_005550762.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005550763.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005550768.1 COG1388 FOG: LysM repeat YP_005550769.1 COG0379 Quinolinate synthase YP_005550770.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_005550771.1 COG0029 Aspartate oxidase YP_005550772.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005550773.1 COG1827 Predicted small molecule binding protein (contains 3H domain) YP_005550774.1 COG0077 Prephenate dehydratase YP_005550775.1 COG4492 ACT domain-containing protein YP_005550776.1 COG0536 Predicted GTPase YP_005550778.1 COG0211 Ribosomal protein L27 YP_005550779.1 COG2868 Predicted ribosomal protein YP_005550780.1 COG0261 Ribosomal protein L21 YP_005550781.1 COG1994 Zn-dependent proteases YP_005550782.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005550783.1 COG2894 Septum formation inhibitor-activating ATPase YP_005550784.1 COG0850 Septum formation inhibitor YP_005550785.1 COG2891 Cell shape-determining protein YP_005550786.1 COG1792 Cell shape-determining protein YP_005550787.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005550788.1 COG2003 DNA repair proteins YP_005550789.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005550791.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_005550792.1 COG0285 Folylpolyglutamate synthase YP_005550793.1 COG0525 Valyl-tRNA synthetase YP_005550797.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005550798.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005550799.1 COG1587 Uroporphyrinogen-III synthase YP_005550800.1 COG0181 Porphobilinogen deaminase YP_005550801.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005550802.1 COG0373 Glutamyl-tRNA reductase YP_005550804.1 COG0218 Predicted GTPase YP_005550805.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005550806.1 COG1067 Predicted ATP-dependent protease YP_005550808.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005550809.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005550810.1 COG0457 FOG: TPR repeat YP_005550812.1 COG0066 3-isopropylmalate dehydratase small subunit YP_005550813.1 COG0065 3-isopropylmalate dehydratase large subunit YP_005550814.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005550815.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_005550816.1 COG0059 Ketol-acid reductoisomerase YP_005550817.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_005550818.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase YP_005550819.1 COG0210 Superfamily I DNA and RNA helicases YP_005550820.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005550821.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005550822.1 COG0622 Predicted phosphoesterase YP_005550823.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_005550824.1 COG0689 RNase PH YP_005550825.1 COG5401 Spore germination protein YP_005550826.1 COG0796 Glutamate racemase YP_005550827.1 COG1846 Transcriptional regulators YP_005550829.1 COG2771 DNA-binding HTH domain-containing proteins YP_005550830.1 COG0824 Predicted thioesterase YP_005550831.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005550832.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005550833.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005550835.1 COG0527 Aspartokinases YP_005550836.1 COG0322 Nuclease subunit of the excinuclease complex YP_005550837.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005550838.1 COG3534 Alpha-L-arabinofuranosidase YP_005550839.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_005550840.1 COG2086 Electron transfer flavoprotein, beta subunit YP_005550841.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_005550842.1 COG1309 Transcriptional regulator YP_005550843.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005550846.1 COG0069 Glutamate synthase domain 2 YP_005550847.1 COG3766 Predicted membrane protein YP_005550848.1 COG1193 Mismatch repair ATPase (MutS family) YP_005550849.1 COG1796 DNA polymerase IV (family X) YP_005550850.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005550851.1 COG3027 Uncharacterized protein conserved in bacteria YP_005550852.1 COG1039 Ribonuclease HIII YP_005550853.1 COG0072 Phenylalanyl-tRNA synthetase beta subunit YP_005550854.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005550856.1 COG0566 rRNA methylases YP_005550858.1 COG3835 Sugar diacid utilization regulator YP_005550859.1 COG0277 FAD/FMN-containing dehydrogenases YP_005550860.1 COG0247 Fe-S oxidoreductase YP_005550861.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005550862.1 COG3534 Alpha-L-arabinofuranosidase YP_005550863.1 COG0395 ABC-type sugar transport system, permease component YP_005550864.1 COG1175 ABC-type sugar transport systems, permease components YP_005550865.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005550866.1 COG0371 Glycerol dehydrogenase and related enzymes YP_005550867.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005550868.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005550869.1 COG1069 Ribulose kinase YP_005550870.1 COG2160 L-arabinose isomerase YP_005550871.1 COG3507 Beta-xylosidase YP_005550872.1 COG1363 Cellulase M and related proteins YP_005550874.1 COG3326 Predicted membrane protein YP_005550875.1 COG0292 Ribosomal protein L20 YP_005550876.1 COG0290 Translation initiation factor 3 (IF-3) YP_005550877.1 COG1346 Putative effector of murein hydrolase YP_005550878.1 COG1380 Putative effector of murein hydrolase LrgA YP_005550879.1 COG3279 Response regulator of the LytR/AlgR family YP_005550880.1 COG3275 Putative regulator of cell autolysis YP_005550881.1 COG1011 Predicted hydrolase (HAD superfamily) YP_005550882.1 COG0441 Threonyl-tRNA synthetase YP_005550883.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_005550885.1 COG0398 Uncharacterized conserved protein YP_005550886.1 COG1484 DNA replication protein YP_005550887.1 COG3611 Replication initiation/membrane attachment protein YP_005550888.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_005550889.1 COG1586 S-adenosylmethionine decarboxylase YP_005550890.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005550891.1 COG1733 Predicted transcriptional regulators YP_005550892.1 COG2814 Arabinose efflux permease YP_005550893.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005550894.1 COG0237 Dephospho-CoA kinase YP_005550895.1 COG1971 Predicted membrane protein YP_005550896.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005550897.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_005550898.1 COG0642 Signal transduction histidine kinase YP_005550899.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005550900.1 COG0039 Malate/lactate dehydrogenases YP_005550901.1 COG0538 Isocitrate dehydrogenases YP_005550902.1 COG0372 Citrate synthase YP_005550903.1 COG2707 Predicted membrane protein YP_005550904.1 COG0628 Predicted permease YP_005550905.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_005550906.1 COG0469 Pyruvate kinase YP_005550907.1 COG0205 6-phosphofructokinase YP_005550908.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_005550909.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005550911.1 COG0281 Malic enzyme YP_005550912.1 COG0587 DNA polymerase III, alpha subunit YP_005550916.1 COG0618 Exopolyphosphatase-related proteins YP_005550917.1 COG0618 Exopolyphosphatase-related proteins YP_005550918.1 COG4109 Predicted transcriptional regulator containing CBS domains YP_005550919.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005550920.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005550922.1 COG0165 Argininosuccinate lyase YP_005550923.1 COG0137 Argininosuccinate synthase YP_005550924.1 COG0521 Molybdopterin biosynthesis enzymes YP_005550925.1 COG0282 Acetate kinase YP_005550926.1 COG0827 Adenine-specific DNA methylase YP_005550927.1 COG2077 Peroxiredoxin YP_005550928.1 COG3874 Uncharacterized conserved protein YP_005550930.1 COG1714 Predicted membrane protein/domain YP_005550931.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005550932.1 COG0061 Predicted sugar kinase YP_005550933.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_005550934.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005550936.1 COG0301 Thiamine biosynthesis ATP pyrophosphatase YP_005550937.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005550938.1 COG1114 Branched-chain amino acid permeases YP_005550940.1 COG4477 Negative regulator of septation ring formation YP_005550942.1 COG1387 Histidinol phosphatase and related hydrolases of the PHP family YP_005550943.1 COG1309 Transcriptional regulator YP_005550944.1 COG1956 GAF domain-containing protein YP_005550946.1 COG2706 3-carboxymuconate cyclase YP_005550947.1 COG0522 Ribosomal protein S4 and related proteins YP_005550948.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_005550949.1 COG0013 Alanyl-tRNA synthetase YP_005550950.1 COG0693 Putative intracellular protease/amidase YP_005550952.1 COG2755 Lysophospholipase L1 and related esterases YP_005550954.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005550955.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005550956.1 COG1378 Predicted transcriptional regulators YP_005550958.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_005550959.1 COG4392 Predicted membrane protein YP_005550961.1 COG0162 Tyrosyl-tRNA synthetase YP_005550962.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005550964.1 COG0517 FOG: CBS domain YP_005550965.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_005550966.1 COG1360 Flagellar motor protein YP_005550967.1 COG1291 Flagellar motor component YP_005550968.1 COG1609 Transcriptional regulators YP_005550970.1 COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005550972.1 COG4980 Gas vesicle protein YP_005550973.1 COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain YP_005550974.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005550976.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005550977.1 COG0073 EMAP domain YP_005550978.1 COG4848 Uncharacterized protein conserved in bacteria YP_005550979.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005550981.1 COG1363 Cellulase M and related proteins YP_005550982.1 COG5584 Predicted small secreted protein YP_005550983.1 COG0281 Malic enzyme YP_005550984.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005550985.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005550987.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_005550988.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_005550990.1 COG1514 2'-5' RNA ligase YP_005550991.1 COG0031 Cysteine synthase YP_005550992.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005550993.1 COG2252 Permeases YP_005550994.1 COG4473 Predicted ABC-type exoprotein transport system, permease component YP_005550995.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005550996.1 COG1349 Transcriptional regulators of sugar metabolism YP_005550997.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005550998.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005550999.1 COG2081 Predicted flavoproteins YP_005551001.1 COG1292 Choline-glycine betaine transporter YP_005551004.1 COG1609 Transcriptional regulators YP_005551005.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005551006.1 COG1175 ABC-type sugar transport systems, permease components YP_005551007.1 COG0395 ABC-type sugar transport system, permease component YP_005551008.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_005551009.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005551010.1 COG0607 Rhodanese-related sulfurtransferase YP_005551011.1 COG0495 Leucyl-tRNA synthetase YP_005551014.1 COG2202 FOG: PAS/PAC domain YP_005551015.1 COG0477 Permeases of the major facilitator superfamily YP_005551016.1 COG5522 Predicted integral membrane protein YP_005551017.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005551018.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005551019.1 COG0642 Signal transduction histidine kinase YP_005551020.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005551021.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005551022.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005551026.1 COG1725 Predicted transcriptional regulators YP_005551027.1 COG0642 Signal transduction histidine kinase YP_005551029.1 COG1242 Predicted Fe-S oxidoreductase YP_005551030.1 COG0500 SAM-dependent methyltransferases YP_005551031.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005551033.1 COG2267 Lysophospholipase YP_005551034.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_005551035.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005551036.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_005551037.1 COG0192 S-adenosylmethionine synthetase YP_005551038.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_005551040.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005551041.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005551042.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005551043.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_005551044.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005551045.1 COG4824 Phage-related holin (Lysis protein) YP_005551046.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005551049.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_005551050.1 COG0759 Uncharacterized conserved protein YP_005551051.1 COG0288 Carbonic anhydrase YP_005551052.1 COG0254 Ribosomal protein L31 YP_005551053.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005551054.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005551057.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_005551058.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005551059.1 COG0447 Dihydroxynaphthoic acid synthase YP_005551060.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005551061.1 COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_005551062.1 COG1169 Isochorismate synthase YP_005551063.1 COG1734 DnaK suppressor protein YP_005551064.1 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) YP_005551066.1 COG3859 Predicted membrane protein YP_005551067.1 COG2268 Uncharacterized protein conserved in bacteria YP_005551071.1 COG1454 Alcohol dehydrogenase, class IV YP_005551072.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005551073.1 COG1510 Predicted transcriptional regulators YP_005551076.1 COG0569 K+ transport systems, NAD-binding component YP_005551077.1 COG1705 Muramidase (flagellum-specific) YP_005551078.1 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) YP_005551079.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_005551080.1 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes YP_005551081.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005551084.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005551085.1 COG0457 FOG: TPR repeat YP_005551088.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005551090.1 COG3655 Predicted transcriptional regulator YP_005551095.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005551096.1 COG1048 Aconitase A YP_005551102.1 COG5280 Phage-related minor tail protein YP_005551104.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005551106.1 COG4993 Glucose dehydrogenase YP_005551107.1 COG0100 Ribosomal protein S11 YP_005551108.1 COG5614 Bacteriophage head-tail adaptor YP_005551110.1 COG3740 Phage head maturation protease YP_005551111.1 COG4695 Phage-related protein YP_005551112.1 COG4626 Phage terminase-like protein, large subunit YP_005551113.1 COG3747 Phage terminase, small subunit YP_005551114.1 COG2217 Cation transport ATPase YP_005551115.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_005551118.1 COG1371 Uncharacterized conserved protein YP_005551120.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005551122.1 COG3617 Prophage antirepressor YP_005551127.1 COG1396 Predicted transcriptional regulators YP_005551128.1 COG0582 Integrase YP_005551129.1 COG1968 Uncharacterized bacitracin resistance protein YP_005551130.1 COG0628 Predicted permease YP_005551132.1 COG0673 Predicted dehydrogenases and related proteins YP_005551133.1 COG0693 Putative intracellular protease/amidase YP_005551134.1 COG0840 Methyl-accepting chemotaxis protein YP_005551135.1 COG0840 Methyl-accepting chemotaxis protein YP_005551136.1 COG0840 Methyl-accepting chemotaxis protein YP_005551138.1 COG0840 Methyl-accepting chemotaxis protein YP_005551140.1 COG0060 Isoleucyl-tRNA synthetase YP_005551141.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_005551142.1 COG0366 Glycosidases YP_005551143.1 COG0443 Molecular chaperone YP_005551144.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005551145.1 COG2738 Predicted Zn-dependent protease YP_005551146.1 COG0471 Di- and tricarboxylate transporters YP_005551148.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_005551151.1 COG0166 Glucose-6-phosphate isomerase YP_005551153.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_005551154.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_005551155.1 COG2155 Uncharacterized conserved protein YP_005551156.1 COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) YP_005551157.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005551158.1 COG1522 Transcriptional regulators YP_005551159.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005551161.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_005551162.1 COG0642 Signal transduction histidine kinase YP_005551164.1 COG5018 Inhibitor of the KinA pathway to sporulation, predicted exonuclease YP_005551165.1 COG0477 Permeases of the major facilitator superfamily YP_005551166.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005551167.1 COG3011 Uncharacterized protein conserved in bacteria YP_005551169.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_005551170.1 COG4565 Response regulator of citrate/malate metabolism YP_005551171.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein YP_005551173.1 COG4603 ABC-type uncharacterized transport system, permease component YP_005551174.1 COG1079 Uncharacterized ABC-type transport system, permease component YP_005551176.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005551177.1 COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit YP_005551178.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_005551179.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005551180.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_005551181.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_005551182.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_005551183.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005551184.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005551186.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005551190.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_005551191.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_005551192.1 COG1335 Amidases related to nicotinamidase YP_005551193.1 COG5506 Uncharacterized conserved protein YP_005551196.1 COG0628 Predicted permease YP_005551198.1 COG1418 Predicted HD superfamily hydrolase YP_005551199.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551201.1 COG1511 Predicted membrane protein YP_005551202.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005551203.1 COG4499 Predicted membrane protein YP_005551204.1 COG5417 Uncharacterized small protein YP_005551205.1 COG4842 Uncharacterized protein conserved in bacteria YP_005551208.1 COG2508 Regulator of polyketide synthase expression YP_005551209.1 COG0686 Alanine dehydrogenase YP_005551210.1 COG3251 Uncharacterized protein conserved in bacteria YP_005551211.1 COG3251 Uncharacterized protein conserved in bacteria YP_005551212.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005551213.1 COG1535 Isochorismate hydrolase YP_005551214.1 COG1021 Peptide arylation enzymes YP_005551215.1 COG1169 Isochorismate synthase YP_005551216.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551217.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_005551218.1 COG2041 Sulfite oxidase and related enzymes YP_005551219.1 COG1268 Uncharacterized conserved protein YP_005551220.1 COG2056 Predicted permease YP_005551221.1 COG0260 Leucyl aminopeptidase YP_005551222.1 COG1963 Uncharacterized protein conserved in bacteria YP_005551223.1 COG3584 Uncharacterized protein conserved in bacteria YP_005551226.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_005551228.1 COG0492 Thioredoxin reductase YP_005551230.1 COG0516 IMP dehydrogenase/GMP reductase YP_005551231.1 COG2199 FOG: GGDEF domain YP_005551232.1 COG1300 Uncharacterized membrane protein YP_005551233.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005551234.1 COG0772 Bacterial cell division membrane protein YP_005551236.1 COG0248 Exopolyphosphatase YP_005551237.1 COG3967 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) YP_005551240.1 COG5632 N-acetylmuramoyl-L-alanine amidase YP_005551241.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_005551246.1 COG1705 Muramidase (flagellum-specific) YP_005551247.1 COG5283 Phage-related tail protein YP_005551248.1 COG5283 Phage-related tail protein YP_005551249.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551250.1 COG5492 Bacterial surface proteins containing Ig-like domains YP_005551251.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005551252.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_005551259.1 COG1520 FOG: WD40-like repeat YP_005551262.1 COG0582 Integrase YP_005551266.1 COG0520 Selenocysteine lyase YP_005551268.1 COG1802 Transcriptional regulators YP_005551269.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005551270.1 COG0058 Glucan phosphorylase YP_005551272.1 COG0294 Dihydropteroate synthase and related enzymes YP_005551273.1 COG1160 Predicted GTPases YP_005551274.1 COG1301 Na+/H+-dicarboxylate symporters YP_005551275.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_005551276.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005551278.1 COG1981 Predicted membrane protein YP_005551279.1 COG3264 Small-conductance mechanosensitive channel YP_005551280.1 COG3655 Predicted transcriptional regulator YP_005551281.1 COG3355 Predicted transcriptional regulator YP_005551282.1 COG4974 Site-specific recombinase XerD YP_005551283.1 COG0316 Uncharacterized conserved protein YP_005551284.1 COG0253 Diaminopimelate epimerase YP_005551285.1 COG1972 Nucleoside permease YP_005551286.1 COG4844 Uncharacterized protein conserved in bacteria YP_005551287.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_005551288.1 COG4837 Uncharacterized protein conserved in bacteria YP_005551289.1 COG0694 Thioredoxin-like proteins and domains YP_005551290.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005551291.1 COG0083 Homoserine kinase YP_005551292.1 COG0498 Threonine synthase YP_005551293.1 COG0460 Homoserine dehydrogenase YP_005551296.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005551297.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005551298.1 COG2445 Uncharacterized conserved protein YP_005551299.1 COG4470 Uncharacterized protein conserved in bacteria YP_005551300.1 COG0320 Lipoate synthase YP_005551301.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005551303.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005551304.1 COG0730 Predicted permeases YP_005551305.1 COG1801 Uncharacterized conserved protein YP_005551307.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005551308.1 COG2508 Regulator of polyketide synthase expression YP_005551310.1 COG3648 Uricase (urate oxidase) YP_005551311.1 COG2264 Ribosomal protein L11 methylase YP_005551312.1 COG0477 Permeases of the major facilitator superfamily YP_005551313.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_005551314.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005551315.1 COG2356 Endonuclease I YP_005551316.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005551317.1 COG2188 Transcriptional regulators YP_005551318.1 COG0524 Sugar kinases, ribokinase family YP_005551319.1 COG0395 ABC-type sugar transport system, permease component YP_005551320.1 COG1175 ABC-type sugar transport systems, permease components YP_005551321.1 COG1653 ABC-type sugar transport system, periplasmic component YP_005551322.1 COG2222 Predicted phosphosugar isomerases YP_005551323.1 COG0789 Predicted transcriptional regulators YP_005551327.1 COG5658 Predicted integral membrane protein YP_005551328.1 COG0322 Nuclease subunit of the excinuclease complex YP_005551329.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005551330.1 COG0500 SAM-dependent methyltransferases YP_005551335.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005551336.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005551337.1 COG0520 Selenocysteine lyase YP_005551338.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005551339.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_005551341.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_005551342.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005551343.1 COG2011 ABC-type metal ion transport system, permease component YP_005551344.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005551347.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005551348.1 COG1658 Small primase-like proteins (Toprim domain) YP_005551350.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_005551351.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_005551352.1 COG1960 Acyl-CoA dehydrogenases YP_005551353.1 COG0183 Acetyl-CoA acetyltransferase YP_005551354.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005551355.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005551357.1 COG0506 Proline dehydrogenase YP_005551360.1 COG1846 Transcriptional regulators YP_005551361.1 COG0477 Permeases of the major facilitator superfamily YP_005551362.1 COG1496 Uncharacterized conserved protein YP_005551363.1 COG1396 Predicted transcriptional regulators YP_005551364.1 COG0863 DNA modification methylase YP_005551366.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005551368.1 COG1164 Oligoendopeptidase F YP_005551369.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551370.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005551371.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005551373.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005551374.1 COG0642 Signal transduction histidine kinase YP_005551375.1 COG3100 Uncharacterized protein conserved in bacteria YP_005551376.1 COG1309 Transcriptional regulator YP_005551377.1 COG0114 Fumarase YP_005551378.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005551382.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005551383.1 COG4585 Signal transduction histidine kinase YP_005551384.1 COG4758 Predicted membrane protein YP_005551385.1 COG3595 Uncharacterized conserved protein YP_005551386.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_005551388.1 COG0477 Permeases of the major facilitator superfamily YP_005551389.1 COG2096 Uncharacterized conserved protein YP_005551390.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005551391.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005551392.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005551393.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551394.1 COG3386 Gluconolactonase YP_005551395.1 COG0642 Signal transduction histidine kinase YP_005551396.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005551397.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005551400.1 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes YP_005551402.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005551403.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005551404.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005551405.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005551406.1 COG3315 O-Methyltransferase involved in polyketide biosynthesis YP_005551407.1 COG0531 Amino acid transporters YP_005551409.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_005551410.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005551411.1 COG1910 Periplasmic molybdate-binding protein/domain YP_005551412.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005551413.1 COG4149 ABC-type molybdate transport system, permease component YP_005551414.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005551415.1 COG4585 Signal transduction histidine kinase YP_005551416.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005551417.1 COG0842 ABC-type multidrug transport system, permease component YP_005551418.1 COG0842 ABC-type multidrug transport system, permease component YP_005551419.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005551421.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_005551422.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_005551423.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_005551424.1 COG3973 Superfamily I DNA and RNA helicases YP_005551425.1 COG2860 Predicted membrane protein YP_005551426.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005551427.1 COG1495 Disulfide bond formation protein DsbB YP_005551428.1 COG1651 Protein-disulfide isomerase YP_005551429.1 COG2217 Cation transport ATPase YP_005551430.1 COG2217 Cation transport ATPase YP_005551431.1 COG2608 Copper chaperone YP_005551432.1 COG1937 Uncharacterized protein conserved in bacteria YP_005551433.1 COG0673 Predicted dehydrogenases and related proteins YP_005551434.1 COG1182 Acyl carrier protein phosphodiesterase YP_005551435.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005551436.1 COG0695 Glutaredoxin and related proteins YP_005551437.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005551438.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005551439.1 COG0765 ABC-type amino acid transport system, permease component YP_005551440.1 COG0765 ABC-type amino acid transport system, permease component YP_005551441.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005551442.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005551443.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005551444.1 COG0583 Transcriptional regulator YP_005551445.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551446.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551447.1 COG2732 Barstar, RNAse (barnase) inhibitor YP_005551448.1 COG0691 tmRNA-binding protein YP_005551449.1 COG0557 Exoribonuclease R YP_005551450.1 COG1647 Esterase/lipase YP_005551451.1 COG1314 Preprotein translocase subunit SecG YP_005551452.1 COG1396 Predicted transcriptional regulators YP_005551453.1 COG1396 Predicted transcriptional regulators YP_005551454.1 COG1396 Predicted transcriptional regulators YP_005551455.1 COG1733 Predicted transcriptional regulators YP_005551456.1 COG0642 Signal transduction histidine kinase YP_005551457.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005551460.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005551461.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005551462.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_005551463.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005551464.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005551465.1 COG1510 Predicted transcriptional regulators YP_005551466.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005551467.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_005551468.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005551469.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005551471.1 COG1510 Predicted transcriptional regulators YP_005551472.1 COG2095 Multiple antibiotic transporter YP_005551475.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005551476.1 COG0477 Permeases of the major facilitator superfamily YP_005551478.1 COG2120 Uncharacterized proteins, LmbE homologs YP_005551480.1 COG2348 Uncharacterized protein involved in methicillin resistance YP_005551481.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005551482.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005551483.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005551484.1 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase YP_005551485.1 COG2234 Predicted aminopeptidases YP_005551487.1 COG0148 Enolase YP_005551488.1 COG0696 Phosphoglyceromutase YP_005551489.1 COG0149 Triosephosphate isomerase YP_005551490.1 COG0126 3-phosphoglycerate kinase YP_005551491.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005551492.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_005551493.1 COG0477 Permeases of the major facilitator superfamily YP_005551494.1 COG1609 Transcriptional regulators YP_005551495.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005551496.1 COG0583 Transcriptional regulator YP_005551497.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005551498.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005551500.1 COG3858 Predicted glycosyl hydrolase YP_005551502.1 COG1737 Transcriptional regulators YP_005551503.1 COG1070 Sugar (pentulose and hexulose) kinases YP_005551504.1 COG2610 H+/gluconate symporter and related permeases YP_005551505.1 COG1556 Uncharacterized conserved protein YP_005551506.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_005551507.1 COG0247 Fe-S oxidoreductase YP_005551508.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005551509.1 COG2186 Transcriptional regulators YP_005551510.1 COG1620 L-lactate permease YP_005551511.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005551513.1 COG5039 Exopolysaccharide biosynthesis protein YP_005551514.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005551515.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005551516.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_005551518.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005551519.1 COG5039 Exopolysaccharide biosynthesis protein YP_005551520.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005551522.1 COG0438 Glycosyltransferase YP_005551523.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005551524.1 COG0438 Glycosyltransferase YP_005551525.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005551526.1 COG0489 ATPases involved in chromosome partitioning YP_005551527.1 COG3944 Capsular polysaccharide biosynthesis protein YP_005551528.1 COG1396 Predicted transcriptional regulators YP_005551529.1 COG2272 Carboxylesterase type B YP_005551530.1 COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit YP_005551531.1 COG0262 Dihydrofolate reductase YP_005551532.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005551533.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005551534.1 COG2364 Predicted membrane protein YP_005551535.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005551536.1 COG3479 Phenolic acid decarboxylase YP_005551542.1 COG0438 Glycosyltransferase YP_005551543.1 COG1621 Beta-fructosidases (levanase/invertase) YP_005551544.1 COG0477 Permeases of the major facilitator superfamily YP_005551546.1 COG1609 Transcriptional regulators YP_005551547.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005551548.1 COG0583 Transcriptional regulator YP_005551549.1 COG2828 Uncharacterized protein conserved in bacteria YP_005551550.1 COG0477 Permeases of the major facilitator superfamily YP_005551552.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_005551553.1 COG1694 Predicted pyrophosphatase YP_005551554.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005551555.1 COG0288 Carbonic anhydrase YP_005551556.1 COG0457 FOG: TPR repeat YP_005551557.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005551559.1 COG2162 Arylamine N-acetyltransferase YP_005551560.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005551561.1 COG1481 Uncharacterized protein conserved in bacteria YP_005551562.1 COG0391 Uncharacterized conserved protein YP_005551563.1 COG1660 Predicted P-loop-containing kinase YP_005551564.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005551566.1 COG0492 Thioredoxin reductase YP_005551567.1 COG3883 Uncharacterized protein conserved in bacteria YP_005551570.1 COG0457 FOG: TPR repeat YP_005551571.1 COG0642 Signal transduction histidine kinase YP_005551572.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005551573.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005551574.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_005551575.1 COG0107 Imidazoleglycerol-phosphate synthase YP_005551576.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_005551577.1 COG0118 Glutamine amidotransferase YP_005551578.1 COG0131 Imidazoleglycerol-phosphate dehydratase YP_005551579.1 COG0141 Histidinol dehydrogenase YP_005551580.1 COG0040 ATP phosphoribosyltransferase YP_005551581.1 COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis YP_005551582.1 COG4990 Uncharacterized protein conserved in bacteria YP_005551583.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005551584.1 COG0546 Predicted phosphatases YP_005551585.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005551586.1 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism YP_005551587.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase YP_005551588.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005551589.1 COG2188 Transcriptional regulators YP_005551590.1 COG1309 Transcriptional regulator YP_005551591.1 COG1409 Predicted phosphohydrolases YP_005551592.1 COG1950 Predicted membrane protein YP_005551593.1 COG1983 Putative stress-responsive transcriptional regulator YP_005551594.1 COG3595 Uncharacterized conserved protein YP_005551597.1 COG0178 Excinuclease ATPase subunit YP_005551598.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005551599.1 COG4897 Uncharacterized protein conserved in bacteria YP_005551600.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005551601.1 COG1309 Transcriptional regulator YP_005551602.1 COG0477 Permeases of the major facilitator superfamily YP_005551604.1 COG3391 Uncharacterized conserved protein YP_005551605.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005551607.1 COG0793 Periplasmic protease YP_005551609.1 COG2177 Cell division protein YP_005551610.1 COG2884 Predicted ATPase involved in cell division YP_005551611.1 COG2010 Cytochrome c, mono- and diheme variants YP_005551612.1 COG1284 Uncharacterized conserved protein YP_005551613.1 COG1186 Protein chain release factor B YP_005551614.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005551615.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005551618.1 COG1516 Flagellin-specific chaperone FliS YP_005551619.1 COG1345 Flagellar capping protein YP_005551620.1 COG1344 Flagellin and related hook-associated proteins YP_005551621.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005551622.1 COG1699 Uncharacterized protein conserved in bacteria YP_005551624.1 COG1344 Flagellin and related hook-associated proteins YP_005551625.1 COG1256 Flagellar hook-associated protein YP_005551627.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_005551629.1 COG1040 Predicted amidophosphoribosyltransferases YP_005551631.1 COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) YP_005551632.1 COG1307 Uncharacterized protein conserved in bacteria YP_005551633.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005551634.1 COG4585 Signal transduction histidine kinase YP_005551635.1 COG1739 Uncharacterized conserved protein YP_005551636.1 COG1316 Transcriptional regulator YP_005551637.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005551638.1 COG0438 Glycosyltransferase YP_005551639.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005551642.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005551643.1 COG0438 Glycosyltransferase YP_005551644.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_005551645.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_005551646.1 COG2247 Putative cell wall-binding domain YP_005551647.1 COG2247 Putative cell wall-binding domain YP_005551649.1 COG1316 Transcriptional regulator YP_005551650.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005551652.1 COG1210 UDP-glucose pyrophosphorylase YP_005551653.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005551654.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005551655.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_005551656.1 COG0438 Glycosyltransferase YP_005551657.1 COG0615 Cytidylyltransferase YP_005551658.1 COG1922 Teichoic acid biosynthesis proteins YP_005551659.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_005551661.1 COG1482 Phosphomannose isomerase YP_005551666.1 COG1216 Predicted glycosyltransferases YP_005551667.1 COG0477 Permeases of the major facilitator superfamily YP_005551668.1 COG1316 Transcriptional regulator YP_005551670.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005551672.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005551674.1 COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) YP_005551681.1 COG1609 Transcriptional regulators YP_005551682.1 COG0524 Sugar kinases, ribokinase family YP_005551683.1 COG1869 ABC-type ribose transport system, auxiliary component YP_005551684.1 COG1129 ABC-type sugar transport system, ATPase component YP_005551685.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005551686.1 COG1879 ABC-type sugar transport system, periplasmic component YP_005551688.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005551689.1 COG3527 Alpha-acetolactate decarboxylase YP_005551690.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase YP_005551691.1 COG0583 Transcriptional regulator YP_005551692.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_005551695.1 COG5337 Spore coat assembly protein YP_005551697.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase YP_005551699.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005551700.1 COG2832 Uncharacterized protein conserved in bacteria YP_005551701.1 COG0405 Gamma-glutamyltransferase YP_005551703.1 COG1522 Transcriptional regulators YP_005551704.1 COG2059 Chromate transport protein ChrA YP_005551705.1 COG2059 Chromate transport protein ChrA YP_005551706.1 COG0263 Glutamate 5-kinase YP_005551709.1 COG5444 Uncharacterized conserved protein YP_005551712.1 COG5444 Uncharacterized conserved protein YP_005551716.1 COG3878 Uncharacterized protein conserved in bacteria YP_005551717.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005551718.1 COG4464 Capsular polysaccharide biosynthesis protein YP_005551719.1 COG0489 ATPases involved in chromosome partitioning YP_005551720.1 COG3944 Capsular polysaccharide biosynthesis protein YP_005551721.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005551723.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005551724.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005551725.1 COG1349 Transcriptional regulators of sugar metabolism YP_005551726.1 COG0629 Single-stranded DNA-binding protein YP_005551729.1 COG1970 Large-conductance mechanosensitive channel YP_005551730.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005551731.1 COG0457 FOG: TPR repeat YP_005551732.1 COG4786 Flagellar basal body rod protein YP_005551733.1 COG4786 Flagellar basal body rod protein YP_005551735.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005551737.1 COG1846 Transcriptional regulators YP_005551738.1 COG0477 Permeases of the major facilitator superfamily YP_005551739.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_005551740.1 COG1335 Amidases related to nicotinamidase YP_005551741.1 COG0004 Ammonia permease YP_005551742.1 COG0347 Nitrogen regulatory protein PII YP_005551743.1 COG0772 Bacterial cell division membrane protein YP_005551744.1 COG0671 Membrane-associated phospholipid phosphatase YP_005551747.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005551748.1 COG1247 Sortase and related acyltransferases YP_005551752.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005551754.1 COG2910 Putative NADH-flavin reductase YP_005551755.1 COG1959 Predicted transcriptional regulator YP_005551756.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_005551757.1 COG0832 Urea amidohydrolase (urease) beta subunit YP_005551758.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_005551760.1 COG3237 Uncharacterized protein conserved in bacteria YP_005551762.1 COG0457 FOG: TPR repeat YP_005551763.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_005551764.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_005551766.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_005551767.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_005551768.1 COG2385 Sporulation protein and related proteins YP_005551769.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005551771.1 COG4836 Predicted membrane protein YP_005551773.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005551774.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005551775.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005551776.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005551777.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005551778.1 COG0711 F0F1-type ATP synthase, subunit b YP_005551779.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005551780.1 COG0356 F0F1-type ATP synthase, subunit a YP_005551783.1 COG0035 Uracil phosphoribosyltransferase YP_005551784.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005551785.1 COG4475 Uncharacterized protein conserved in bacteria YP_005551786.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005551787.1 COG0394 Protein-tyrosine-phosphatase YP_005551788.1 COG1971 Predicted membrane protein YP_005551789.1 COG0009 Putative translation factor (SUA5) YP_005551791.1 COG1246 N-acetylglutamate synthase and related acetyltransferases YP_005551795.1 COG2890 Methylase of polypeptide chain release factors YP_005551796.1 COG0216 Protein chain release factor A YP_005551797.1 COG0346 Lactoylglutathione lyase and related lyases YP_005551798.1 COG0789 Predicted transcriptional regulators YP_005551799.1 COG0679 Predicted permeases YP_005551800.1 COG0281 Malic enzyme YP_005551801.1 COG1435 Thymidine kinase YP_005551802.1 COG0254 Ribosomal protein L31 YP_005551804.1 COG1158 Transcription termination factor YP_005551805.1 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins YP_005551806.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005551807.1 COG0176 Transaldolase YP_005551808.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005551809.1 COG0784 FOG: CheY-like receiver YP_005551811.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005551812.1 COG3343 DNA-directed RNA polymerase, delta subunit YP_005551813.1 COG0247 Fe-S oxidoreductase YP_005551814.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005551815.1 COG4294 UV damage repair endonuclease YP_005551817.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005551818.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005551819.1 COG2181 Nitrate reductase gamma subunit YP_005551820.1 COG2180 Nitrate reductase delta subunit YP_005551821.1 COG1140 Nitrate reductase beta subunit YP_005551822.1 COG5013 Nitrate reductase alpha subunit YP_005551825.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_005551826.1 COG2223 Nitrate/nitrite transporter YP_005551827.1 COG0018 Arginyl-tRNA synthetase YP_005551828.1 COG4506 Uncharacterized protein conserved in bacteria YP_005551830.1 COG3391 Uncharacterized conserved protein YP_005551831.1 COG0457 FOG: TPR repeat YP_005551833.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005551834.1 COG0421 Spermidine synthase YP_005551835.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005551836.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005551838.1 COG1994 Zn-dependent proteases YP_005551839.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005551840.1 COG1846 Transcriptional regulators YP_005551841.1 COG0531 Amino acid transporters YP_005551843.1 COG3465 Uncharacterized conserved protein YP_005551844.1 COG1078 HD superfamily phosphohydrolases YP_005551845.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005551848.1 COG1695 Predicted transcriptional regulators YP_005551849.1 COG4709 Predicted membrane protein YP_005551850.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_005551851.1 COG5635 Predicted NTPase (NACHT family) YP_005551852.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005551853.1 COG0183 Acetyl-CoA acetyltransferase YP_005551855.1 COG0095 Lipoate-protein ligase A YP_005551856.1 COG0583 Transcriptional regulator YP_005551857.1 COG2855 Predicted membrane protein YP_005551858.1 COG0280 Phosphotransacetylase YP_005551859.1 COG3253 Uncharacterized conserved protein YP_005551860.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551861.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005551862.1 COG0477 Permeases of the major facilitator superfamily YP_005551863.1 COG0439 Biotin carboxylase YP_005551864.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551867.1 COG2814 Arabinose efflux permease YP_005551868.1 COG0477 Permeases of the major facilitator superfamily YP_005551869.1 COG0833 Amino acid transporters YP_005551870.1 COG4187 Arginine degradation protein (predicted deacylase) YP_005551871.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005551872.1 COG3014 Uncharacterized protein conserved in bacteria YP_005551873.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005551875.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_005551876.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_005551877.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_005551878.1 COG1209 dTDP-glucose pyrophosphorylase YP_005551879.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_005551880.1 COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog YP_005551881.1 COG2089 Sialic acid synthase YP_005551882.1 COG0456 Acetyltransferases YP_005551883.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005551884.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_005551885.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005551887.1 COG2363 Uncharacterized small membrane protein YP_005551888.1 COG2233 Xanthine/uracil permeases YP_005551890.1 COG0692 Uracil DNA glycosylase YP_005551891.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005551893.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005551895.1 COG1621 Beta-fructosidases (levanase/invertase) YP_005551896.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005551897.1 COG3711 Transcriptional antiterminator YP_005551899.1 COG0644 Dehydrogenases (flavoproteins) YP_005551900.1 COG1404 Subtilisin-like serine proteases YP_005551901.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_005551902.1 COG2378 Predicted transcriptional regulator YP_005551903.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005551906.1 COG5022 Myosin heavy chain YP_005551907.1 COG0778 Nitroreductase YP_005551908.1 COG0772 Bacterial cell division membrane protein YP_005551909.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005551910.1 COG0358 DNA primase (bacterial type) YP_005551912.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_005551913.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005551914.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005551915.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005551916.1 COG2261 Predicted membrane protein YP_005551917.1 COG4468 Galactose-1-phosphate uridyltransferase YP_005551918.1 COG0153 Galactokinase YP_005551919.1 COG2246 Predicted membrane protein YP_005551920.1 COG1309 Transcriptional regulator YP_005551923.1 COG0500 SAM-dependent methyltransferases YP_005551924.1 COG1216 Predicted glycosyltransferases YP_005551925.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_005551926.1 COG2837 Predicted iron-dependent peroxidase YP_005551927.1 COG2822 Predicted periplasmic lipoprotein involved in iron transport YP_005551928.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005551929.1 COG0352 Thiamine monophosphate synthase YP_005551930.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005551931.1 COG0583 Transcriptional regulator YP_005551932.1 COG1380 Putative effector of murein hydrolase LrgA YP_005551933.1 COG1346 Putative effector of murein hydrolase YP_005551935.1 COG4895 Uncharacterized conserved protein YP_005551936.1 COG0789 Predicted transcriptional regulators YP_005551937.1 COG5504 Predicted Zn-dependent protease YP_005551938.1 COG1092 Predicted SAM-dependent methyltransferases YP_005551939.1 COG0346 Lactoylglutathione lyase and related lyases YP_005551940.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005551941.1 COG1404 Subtilisin-like serine proteases YP_005551942.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005551946.1 COG2357 Uncharacterized protein conserved in bacteria YP_005551947.1 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_005551948.1 COG2513 PEP phosphonomutase and related enzymes YP_005551950.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_005551951.1 COG1696 Predicted membrane protein involved in D-alanine export YP_005551952.1 COG0236 Acyl carrier protein YP_005551953.1 COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) YP_005551954.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005551955.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_005551956.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_005551957.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005551958.1 COG1440 Phosphotransferase system cellobiose-specific component IIB YP_005551959.1 COG3711 Transcriptional antiterminator YP_005551961.1 COG2094 3-methyladenine DNA glycosylase YP_005551963.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005551964.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005551965.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005551966.1 COG0640 Predicted transcriptional regulators YP_005551967.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_005551968.1 COG1440 Phosphotransferase system cellobiose-specific component IIB YP_005551969.1 COG1447 Phosphotransferase system cellobiose-specific component IIA YP_005551970.1 COG1455 Phosphotransferase system cellobiose-specific component IIC YP_005551971.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005551972.1 COG1940 Transcriptional regulator/sugar kinase YP_005551973.1 COG1482 Phosphomannose isomerase YP_005551974.1 COG4124 Beta-mannanase YP_005551975.1 COG0753 Catalase YP_005551976.1 COG3049 Penicillin V acylase and related amidases YP_005551977.1 COG1457 Purine-cytosine permease and related proteins YP_005551978.1 COG0063 Predicted sugar kinase YP_005551979.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_005551980.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_005551981.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005551982.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005551983.1 COG3493 Na+/citrate symporter YP_005551984.1 COG0726 Predicted xylanase/chitin deacetylase YP_005551985.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005551986.1 COG2508 Regulator of polyketide synthase expression YP_005551987.1 COG1284 Uncharacterized conserved protein YP_005551989.1 COG1087 UDP-glucose 4-epimerase YP_005551991.1 COG2195 Di- and tripeptidases YP_005551995.1 COG4894 Uncharacterized conserved protein YP_005551996.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005551997.1 COG0500 SAM-dependent methyltransferases YP_005551999.1 COG1972 Nucleoside permease YP_005552002.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005552003.1 COG0753 Catalase YP_005552004.1 COG2851 H+/citrate symporter YP_005552005.1 COG2273 Beta-glucanase/Beta-glucan synthetase YP_005552006.1 COG3711 Transcriptional antiterminator YP_005552007.1 COG2270 Permeases of the major facilitator superfamily YP_005552008.1 COG0513 Superfamily II DNA and RNA helicases YP_005552009.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_005552013.1 COG3262 Ni,Fe-hydrogenase III component G YP_005552017.1 COG1256 Flagellar hook-associated protein YP_005552018.1 COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme YP_005552019.1 COG3866 Pectate lyase YP_005552020.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005552021.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005552022.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005552023.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005552024.1 COG3727 DNA G:T-mismatch repair endonuclease YP_005552026.1 COG0270 Site-specific DNA methylase YP_005552027.1 COG0326 Molecular chaperone, HSP90 family YP_005552029.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005552030.1 COG3451 Type IV secretory pathway, VirB4 components YP_005552031.1 COG3507 Beta-xylosidase YP_005552033.1 COG2986 Histidine ammonia-lyase YP_005552034.1 COG2987 Urocanate hydratase YP_005552035.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_005552036.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005552037.1 COG0833 Amino acid transporters YP_005552038.1 COG0213 Thymidine phosphorylase YP_005552039.1 COG1972 Nucleoside permease YP_005552040.1 COG0274 Deoxyribose-phosphate aldolase YP_005552041.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_005552042.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005552048.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005552049.1 COG5294 Uncharacterized protein conserved in bacteria YP_005552050.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005552051.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component; efflux of cationic peptides YP_005552052.1 COG0642 Signal transduction histidine kinase YP_005552053.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005552054.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005552055.1 COG1082 Sugar phosphate isomerases/epimerases YP_005552056.1 COG1082 Sugar phosphate isomerases/epimerases YP_005552057.1 COG0673 Predicted dehydrogenases and related proteins YP_005552058.1 COG0477 Permeases of the major facilitator superfamily YP_005552059.1 COG1082 Sugar phosphate isomerases/epimerases YP_005552060.1 COG3962 Acetolactate synthase YP_005552061.1 COG0524 Sugar kinases, ribokinase family YP_005552062.1 COG3718 Uncharacterized enzyme involved in inositol metabolism YP_005552063.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005552064.1 COG1349 Transcriptional regulators of sugar metabolism YP_005552065.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005552066.1 COG0477 Permeases of the major facilitator superfamily YP_005552067.1 COG0326 Molecular chaperone, HSP90 family YP_005552068.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005552069.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005552070.1 COG4585 Signal transduction histidine kinase YP_005552071.1 COG3239 Fatty acid desaturase YP_005552073.1 COG1309 Transcriptional regulator YP_005552074.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005552075.1 COG1520 FOG: WD40-like repeat YP_005552078.1 COG0640 Predicted transcriptional regulators YP_005552079.1 COG2814 Arabinose efflux permease YP_005552080.1 COG1714 Predicted membrane protein/domain YP_005552081.1 COG2514 Predicted ring-cleavage extradiol dioxygenase YP_005552082.1 COG0450 Peroxiredoxin YP_005552083.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_005552084.1 COG3386 Gluconolactonase YP_005552085.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_005552086.1 COG2378 Predicted transcriptional regulator YP_005552087.1 COG3708 Uncharacterized protein conserved in bacteria YP_005552090.1 COG3855 Uncharacterized protein conserved in bacteria YP_005552091.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_005552092.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs YP_005552093.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_005552094.1 COG2068 Uncharacterized MobA-related protein YP_005552095.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_005552097.1 COG3501 Uncharacterized protein conserved in bacteria YP_005552098.1 COG0349 Ribonuclease D YP_005552099.1 COG0210 Superfamily I DNA and RNA helicases YP_005552100.1 COG3593 Predicted ATP-dependent endonuclease of the OLD family YP_005552101.1 COG1576 Uncharacterized conserved protein YP_005552105.1 COG3863 Uncharacterized distant relative of cell wall-associated hydrolases YP_005552106.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005552107.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005552108.1 COG4412 Uncharacterized protein conserved in bacteria YP_005552109.1 COG0457 FOG: TPR repeat YP_005552110.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005552111.1 COG0833 Amino acid transporters YP_005552112.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005552113.1 COG5658 Predicted integral membrane protein YP_005552114.1 COG0640 Predicted transcriptional regulators YP_005552115.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_005552116.1 COG0477 Permeases of the major facilitator superfamily YP_005552117.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005552118.1 COG0642 Signal transduction histidine kinase YP_005552119.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005552120.1 COG3212 Predicted membrane protein YP_005552122.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005552123.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005552124.1 COG4853 Uncharacterized protein conserved in bacteria YP_005552125.1 COG4863 Uncharacterized protein conserved in bacteria YP_005552126.1 COG5002 Signal transduction histidine kinase YP_005552127.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005552129.1 COG0104 Adenylosuccinate synthase YP_005552130.1 COG0346 Lactoylglutathione lyase and related lyases YP_005552132.1 COG0305 Replicative DNA helicase YP_005552137.1 COG0438 Glycosyltransferase YP_005552139.1 COG3919 Predicted ATP-grasp enzyme YP_005552140.1 COG0438 Glycosyltransferase YP_005552141.1 COG2120 Uncharacterized proteins, LmbE homologs YP_005552142.1 COG0515 Serine/threonine protein kinase YP_005552143.1 COG0359 Ribosomal protein L9 YP_005552144.1 COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain YP_005552145.1 COG4241 Predicted membrane protein YP_005552147.1 COG5577 Spore coat protein YP_005552148.1 COG1733 Predicted transcriptional regulators YP_005552149.1 COG1227 Inorganic pyrophosphatase/exopolyphosphatase YP_005552150.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005552152.1 COG1621 Beta-fructosidases (levanase/invertase) YP_005552153.1 COG1802 Transcriptional regulators YP_005552154.1 COG2318 Uncharacterized protein conserved in bacteria YP_005552155.1 COG0477 Permeases of the major facilitator superfamily YP_005552156.1 COG3759 Predicted membrane protein YP_005552157.1 COG0778 Nitroreductase YP_005552158.1 COG1846 Transcriptional regulators YP_005552159.1 COG1284 Uncharacterized conserved protein YP_005552160.1 COG1846 Transcriptional regulators YP_005552161.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005552162.1 COG2318 Uncharacterized protein conserved in bacteria YP_005552163.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_005552164.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005552165.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005552166.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_005552167.1 COG1266 Predicted metal-dependent membrane protease YP_005552168.1 COG0477 Permeases of the major facilitator superfamily YP_005552169.1 COG0346 Lactoylglutathione lyase and related lyases YP_005552170.1 COG1609 Transcriptional regulators YP_005552171.1 COG0708 Exonuclease III YP_005552172.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005552173.1 COG2169 Adenosine deaminase YP_005552175.1 COG0629 Single-stranded DNA-binding protein YP_005552176.1 COG0360 Ribosomal protein S6 YP_005552177.1 COG0012 Predicted GTPase, probable translation factor YP_005552178.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005552179.1 COG4481 Uncharacterized protein conserved in bacteria YP_005552180.1 COG3949 Uncharacterized membrane protein YP_005552181.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005552183.1 COG1475 Predicted transcriptional regulators YP_005552184.1 COG1192 ATPases involved in chromosome partitioning YP_005552185.1 COG1475 Predicted transcriptional regulators YP_005552186.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005552187.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005552188.1 COG0486 Predicted GTPase YP_005552189.1 COG1847 Predicted RNA-binding protein YP_005552190.1 COG0706 Preprotein translocase subunit YidC YP_005552191.1 COG0594 RNase P protein component