-- dump date 20120504_134731 -- class Genbank::CDS -- table cds_note -- id note YP_002880029.1 PFAM: Bacterial dnaA protein helix-turn-helix domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_002880030.1 PFAM: DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_002880031.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_002880032.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_002880033.1 PFAM: Protein of unknown function (DUF721) YP_002880034.1 negatively supercoils closed circular double-stranded DNA YP_002880035.1 negatively supercoils closed circular double-stranded DNA YP_002880038.1 PFAM: YCII-related protein domain YP_002880039.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002880040.1 PFAM: Cupin domain YP_002880042.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880043.1 PFAM: Bacterial extracellular solute-binding protein YP_002880044.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880045.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880047.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_002880048.1 PFAM: Rhomboid family YP_002880049.1 PFAM: Uncharacterised protein family (UPF0233) YP_002880050.1 PFAM: Bacterial protein of unknown function (DUF881) YP_002880051.1 PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein YP_002880053.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_002880054.1 PFAM: Protein kinase domain; PASTA domain YP_002880055.1 PFAM: Protein kinase domain YP_002880056.1 PFAM: Penicillin binding protein transpeptidase domain YP_002880057.1 PFAM: Cell cycle protein YP_002880058.1 PFAM: Protein phosphatase 2C YP_002880059.1 PFAM: FHA domain YP_002880060.1 PFAM: FHA domain YP_002880061.1 PFAM: Helix-turn-helix YP_002880063.1 PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein YP_002880064.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880066.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002880067.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880068.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880069.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter YP_002880070.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter YP_002880071.1 PFAM: ROK family YP_002880072.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_002880073.1 PFAM: Aldo/keto reductase family YP_002880074.1 PFAM: Nitroreductase family YP_002880075.1 PFAM: Acetyltransferase (GNAT) family YP_002880076.1 PFAM: LD-carboxypeptidase YP_002880077.1 PFAM: Major Facilitator Superfamily YP_002880080.1 PFAM: Uncharacterized conserved protein (DUF2174) YP_002880082.1 PFAM: phosphoglycerate mutase family YP_002880083.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880084.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880085.1 PFAM: glycosyl hydrolase of unknown function (DUF1680) YP_002880087.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880088.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880089.1 PFAM: Protein of unknown function, DUF624 YP_002880090.1 PFAM: glycosyl hydrolase of unknown function (DUF1680) YP_002880091.1 PFAM: Acetyltransferase (GNAT) family YP_002880093.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_002880094.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_002880095.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH) YP_002880096.1 PFAM: Ankyrin repeat YP_002880097.1 PFAM: Amidohydrolase family; D-aminoacylase, C-terminal region; Amidohydrolase family YP_002880099.1 PFAM: FAD binding domain; Berberine and berberine like YP_002880100.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002880101.1 PFAM: RibD C-terminal domain YP_002880102.1 PFAM: YCII-related protein domain YP_002880103.1 PFAM: phosphoglycerate mutase family YP_002880104.1 PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; PEP-utilising enzyme, mobile domain YP_002880107.1 PFAM: phosphotransferase enzyme family YP_002880109.1 PFAM: Sugar-specific transcriptional regulator TrmB YP_002880110.1 PFAM: PA domain; Subtilase family; TIGRFAM: LPXTG-motif cell wall anchor domain YP_002880112.1 PFAM: alpha/beta hydrolase fold YP_002880113.1 PFAM: Acetyltransferase (GNAT) family YP_002880114.1 PFAM: Methyltransferase domain YP_002880115.1 PFAM: ASCH domain YP_002880116.1 PFAM: YceI-like domain YP_002880118.1 PFAM: Aldo/keto reductase family YP_002880119.1 PFAM: Alanine racemase, N-terminal domain YP_002880120.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP YP_002880122.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein NrdH YP_002880123.1 PFAM: NrdI Flavodoxin like; TIGRFAM: ribonucleoside-diphosphate reductase 2, operon protein nrdI YP_002880124.1 PFAM: Ribonucleotide reductase, barrel domain; Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase N-terminal; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit YP_002880125.1 TIGRFAM: group I intron endonuclease YP_002880126.1 PFAM: Ribonucleotide reductase, small chain YP_002880128.1 PFAM: Predicted membrane protein (DUF2078) YP_002880129.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002880130.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002880132.1 PFAM: phosphotransferase enzyme family YP_002880133.1 PFAM: Luciferase-like monooxygenase YP_002880134.1 PFAM: Bacterial regulatory proteins, gntR family YP_002880136.1 PFAM: Luciferase-like monooxygenase YP_002880137.1 PFAM: PAP2 superfamily YP_002880138.1 PFAM: phosphotransferase enzyme family YP_002880139.1 PFAM: Siderophore-interacting FAD-binding domain; Siderophore-interacting protein YP_002880140.1 PFAM: Polysaccharide deacetylase YP_002880141.1 PFAM: Amidohydrolase family YP_002880142.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_002880144.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002880145.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002880146.1 PFAM: phosphoribosyl transferase domain YP_002880148.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002880149.1 PFAM: short chain dehydrogenase YP_002880150.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_002880151.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002880152.1 PFAM: SMP-30/Gluconolaconase/LRE-like region YP_002880153.1 PFAM: short chain dehydrogenase YP_002880154.1 PFAM: Bacterial extracellular solute-binding protein YP_002880155.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880156.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880157.1 PFAM: Melibiase YP_002880158.1 PFAM: phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_002880159.1 PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I YP_002880160.1 PFAM: Domain of unknown function (DU1801) YP_002880161.1 PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, ; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002880162.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880163.1 PFAM: alpha/beta hydrolase fold YP_002880164.1 PFAM: Bacterial extracellular solute-binding protein YP_002880166.1 PFAM: esterase YP_002880167.1 PFAM: ABC transporter YP_002880168.1 PFAM: FecCD transport family YP_002880169.1 PFAM: FecCD transport family YP_002880170.1 with FepCDG is involved in the transport of ferric enterobactin YP_002880172.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880173.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880175.1 PFAM: HNH endonuclease YP_002880178.1 PFAM: Helix-turn-helix domain, rpiR family; SIS domain YP_002880179.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002880180.1 PFAM: HTH domain YP_002880181.1 PFAM: Epoxide hydrolase N terminus YP_002880183.1 PFAM: Bacterial protein of unknown function (DUF885) YP_002880184.1 PFAM: Luciferase-like monooxygenase YP_002880186.1 PFAM: Amidohydrolase family YP_002880187.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_002880188.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_002880189.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880190.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880191.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002880192.1 PFAM: Helix-turn-helix; Cupin domain YP_002880193.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002880195.1 PFAM: Aldo/keto reductase family YP_002880198.1 PFAM: Protein of unknown function (DUF1211) YP_002880200.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_002880201.1 PFAM: Polysaccharide lyase family 8, C-terminal beta-sandwich domain; Polysaccharide lyase family 8, N terminal alpha-helical domain; Polysaccharide lyase family 8, super-sandwich domain YP_002880203.1 PFAM: ROK family YP_002880204.1 PFAM: Sulfatase YP_002880205.1 PFAM: Bacterial extracellular solute-binding protein YP_002880206.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880207.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880208.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_002880210.1 PFAM: Glycosyl hydrolases family 15 YP_002880211.1 PFAM: 4Fe-4S binding domain; FAD linked oxidases, C-terminal domain; FAD binding domain YP_002880213.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002880214.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002880215.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002880217.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880218.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880219.1 PFAM: Bacterial extracellular solute-binding protein YP_002880220.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880221.1 PFAM: FAD dependent oxidoreductase YP_002880222.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_002880223.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_002880224.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_002880225.1 PFAM: Pentapeptide repeats (8 copies) YP_002880227.1 PFAM: Acetyltransferase (GNAT) family YP_002880228.1 PFAM: Beta-lactamase YP_002880229.1 PFAM: HxlR-like helix-turn-helix YP_002880230.1 PFAM: alpha/beta hydrolase fold YP_002880231.1 PFAM: RibD C-terminal domain YP_002880232.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase N terminus YP_002880233.1 PFAM: HTH domain YP_002880234.1 PFAM: RibD C-terminal domain YP_002880235.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_002880236.1 PFAM: Aldehyde dehydrogenase family YP_002880238.1 PFAM: Aldehyde dehydrogenase family YP_002880240.1 PFAM: Subtilase family YP_002880244.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain YP_002880245.1 PFAM: RNA methylase family UPF0020 YP_002880246.1 PFAM: TrkA-C domain; Citrate transporter YP_002880247.1 PFAM: alpha/beta hydrolase fold; TAP-like protein YP_002880248.1 PFAM: Domain of unknown function DUF20 YP_002880249.1 PFAM: Acetyltransferase (GNAT) family YP_002880250.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880252.1 PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain YP_002880253.1 PFAM: Cyclic nucleotide-binding domain; Mechanosensitive ion channel YP_002880255.1 PFAM: Domain of unknown function (DUF1605); Helicase associated domain (HA2); Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent helicase HrpA YP_002880256.1 PFAM: FAD dependent oxidoreductase; FAD binding domain YP_002880257.1 PFAM: Methyltransferase domain YP_002880258.1 PFAM: SMP-30/Gluconolaconase/LRE-like region YP_002880260.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_002880261.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily YP_002880262.1 PFAM: Histidine kinase YP_002880263.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002880264.1 PFAM: Acetyltransferase (GNAT) family YP_002880265.1 PFAM: Methylenetetrahydrofolate reductase YP_002880266.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_002880267.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: ATPase P; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002880269.1 PFAM: Rieske [2Fe-2S] domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002880272.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002880274.1 PFAM: Protein of unknown function (DUF664) YP_002880276.1 PFAM: Domain of unknown function DUF81 YP_002880278.1 PFAM: alpha/beta hydrolase fold YP_002880280.1 PFAM: Amino acid permease YP_002880281.1 PFAM: Integral membrane protein DUF125 YP_002880283.1 PFAM: ABC transporter YP_002880284.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880288.1 PFAM: Major Facilitator Superfamily YP_002880289.1 PFAM: Cupin domain YP_002880291.1 PFAM: NAD dependent epimerase/dehydratase family YP_002880292.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02957 family; RNA polymerase sigma factor, sigma-70 family YP_002880293.1 PFAM: MMPL family YP_002880294.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880295.1 PFAM: Acetyltransferase (GNAT) family YP_002880297.1 PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme YP_002880298.1 PFAM: RibD C-terminal domain YP_002880299.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_002880301.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_002880302.1 PFAM: Inosine-uridine preferring nucleoside hydrolase YP_002880303.1 PFAM: Bacterial extracellular solute-binding protein YP_002880304.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880305.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880306.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_002880307.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002880308.1 PFAM: Cupin domain YP_002880309.1 PFAM: Bacterial protein of unknown function (DUF899) YP_002880310.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880311.1 PFAM: Carboxymuconolactone decarboxylase family YP_002880312.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02957 family; RNA polymerase sigma factor, sigma-70 family YP_002880313.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_002880314.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002880315.1 PFAM: ABC-2 type transporter YP_002880316.1 PFAM: ABC transporter YP_002880317.1 PFAM: Acetyltransferase (GNAT) family YP_002880318.1 PFAM: peptidoglycan binding domain YP_002880319.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_002880320.1 PFAM: alpha/beta hydrolase fold YP_002880322.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_002880323.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002880325.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_002880327.1 PFAM: AsnC family YP_002880328.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002880329.1 PFAM: Alpha-N-acetylglucosaminidase (NAGLU) YP_002880330.1 PFAM: Sulfatase YP_002880332.1 PFAM: Bacterial extracellular solute-binding protein YP_002880333.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880334.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880335.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880336.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002880337.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880338.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880339.1 PFAM: ADP-ribosylglycohydrolase YP_002880340.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_002880341.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002880342.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002880343.1 PFAM: Glucose inhibited division protein A YP_002880344.1 PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_002880346.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880347.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880348.1 PFAM: Bacterial extracellular solute-binding protein YP_002880349.1 PFAM: Protein of unknown function (DUF1470) YP_002880350.1 PFAM: Major Facilitator Superfamily YP_002880352.1 PFAM: DSBA-like thioredoxin domain YP_002880353.1 PFAM: phosphotransferase enzyme family YP_002880355.1 PFAM: Beta-eliminating lyase YP_002880356.1 TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; Tat (twin-arginine translocation) pathway signal sequence YP_002880358.1 PFAM: Protein of unknown function (DUF664) YP_002880359.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_002880360.1 TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083 YP_002880361.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_002880363.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002880364.1 PFAM: GlcNAc-PI de-N-acetylase; Response regulator receiver domain YP_002880365.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box YP_002880367.1 PFAM: Glycosyl transferase family 2 YP_002880368.1 PFAM: ATP-grasp domain YP_002880369.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002880370.1 PFAM: Bacterial regulatory protein, arsR family YP_002880372.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer YP_002880373.1 PFAM: HNH endonuclease YP_002880374.1 PFAM: Acetyltransferase (GNAT) family YP_002880377.1 TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002880381.1 TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002880384.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002880386.1 PFAM: Transcriptional regulator PadR-like family; TIGRFAM: transcriptional regulator, Acidobacterial, PadR-family YP_002880387.1 PFAM: ABC transporter YP_002880389.1 PFAM: Bacterial regulatory proteins, luxR family YP_002880390.1 PFAM: Endonuclease/Exonuclease/phosphatase family; 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase YP_002880391.1 PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family YP_002880393.1 catalyzes the formation of acetate from pyruvate YP_002880394.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_002880395.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_002880396.1 PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase YP_002880397.1 PFAM: Major Facilitator Superfamily YP_002880399.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_002880401.1 PFAM: Glycosyl transferase family 2 YP_002880403.1 PFAM: ACT domain; Prephenate dehydratase YP_002880404.1 PFAM: Diacylglycerol kinase catalytic domain YP_002880405.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002880406.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily YP_002880407.1 PFAM: Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat YP_002880408.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002880409.1 PFAM: YCII-related protein domain YP_002880410.1 PFAM: Protein of unknown function (DUF2587) YP_002880411.1 PFAM: Adenylate and Guanylate cyclase catalytic domain YP_002880412.1 PFAM: Cyclic nucleotide-binding domain YP_002880414.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) YP_002880415.1 PFAM: Penicillin binding protein transpeptidase domain YP_002880416.1 PFAM: Sulfatase YP_002880417.1 PFAM: Aminoglycoside 3-N-acetyltransferase YP_002880418.1 PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit YP_002880419.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002880420.1 PFAM: Transcriptional regulatory protein, C terminal; Bacterial transcriptional activator domain YP_002880421.1 PFAM: Luciferase-like monooxygenase YP_002880422.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_002880423.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family YP_002880425.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002880426.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002880427.1 PFAM: Major Facilitator Superfamily YP_002880429.1 PFAM: NAD dependent epimerase/dehydratase family YP_002880430.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_002880431.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_002880436.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_002880442.1 PFAM: FAD binding domain YP_002880443.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002880445.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_002880446.1 PFAM: ABC transporter; NIL domain YP_002880447.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880448.1 PFAM: FAD dependent oxidoreductase YP_002880449.1 PFAM: Aminotransferase class I and II YP_002880450.1 PFAM: Aldo/keto reductase family YP_002880452.1 PFAM: NADPH-dependent FMN reductase YP_002880454.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880456.1 PFAM: Integral membrane protein DUF125 YP_002880457.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002880458.1 PFAM: UTRA domain; Bacterial regulatory proteins, gntR family YP_002880459.1 PFAM: Bacterial extracellular solute-binding protein YP_002880460.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880461.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880462.1 PFAM: N-acetylmannosamine-6-phosphate epimerase YP_002880463.1 PFAM: ROK family YP_002880465.1 PFAM: Protein of unknown function, DUF488 YP_002880466.1 PFAM: Predicted permease YP_002880467.1 PFAM: ABC transporter YP_002880468.1 PFAM: Domain of unknown function DUF87 YP_002880469.1 PFAM: Bacterial regulatory proteins, luxR family YP_002880470.1 PFAM: AraC-like ligand binding domain YP_002880471.1 PFAM: RibD C-terminal domain YP_002880472.1 PFAM: Domain of unknown function (DU1801) YP_002880473.1 PFAM: Major Facilitator Superfamily YP_002880474.1 PFAM: Protein of unknown function (DUF1222) YP_002880475.1 PFAM: ABC transporter YP_002880476.1 PFAM: NMT1/THI5 like YP_002880477.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880478.1 PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106 YP_002880480.1 PFAM: Gram positive anchor; TIGRFAM: LPXTG-motif cell wall anchor domain YP_002880482.1 PFAM: Predicted permease YP_002880483.1 PFAM: ABC transporter YP_002880488.1 PFAM: HTH domain YP_002880489.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_002880490.1 PFAM: MarR family YP_002880491.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002880492.1 PFAM: alpha/beta hydrolase fold YP_002880494.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002880495.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880496.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880497.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_002880498.1 PFAM: Glycosyl hydrolases family 43 YP_002880499.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002880501.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002880502.1 PFAM: Protein of unknown function (DUF664) YP_002880503.1 PFAM: Domain of unknown function (DUF1876) YP_002880505.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth YP_002880506.1 PFAM: ABC-2 type transporter YP_002880507.1 PFAM: ABC transporter YP_002880510.1 PFAM: ABC transporter YP_002880511.1 PFAM: Bacterial regulatory proteins, gntR family YP_002880513.1 PFAM: Protein of unknown function (DUF328) YP_002880515.1 PFAM: Major Facilitator Superfamily YP_002880516.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA polymerase LigD, polymerase domain YP_002880517.1 PFAM: Protein of unknown function (DUF541) YP_002880519.1 PFAM: Transcriptional regulator PadR-like family YP_002880521.1 PFAM: Acylphosphatase YP_002880522.1 PFAM: Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; Pyridoxamine 5'-phosphate oxidase YP_002880523.1 PFAM: CAAX amino terminal protease family YP_002880524.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002880526.1 PFAM: MarR family YP_002880527.1 PFAM: Type III restriction enzyme, res subunit; Type I restriction enzyme R protein N terminus (HSDR_N); TIGRFAM: type I site-specific deoxyribonuclease, HsdR family YP_002880528.1 PFAM: GIY-YIG catalytic domain YP_002880529.1 PFAM: Type I restriction modification DNA specificity domain YP_002880530.1 PFAM: N-6 DNA Methylase; TIGRFAM: type I restriction system adenine methylase (hsdM) YP_002880532.1 E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component YP_002880533.1 PFAM: Aminotransferase class-V YP_002880535.1 TIGRFAM: LPXTG-motif cell wall anchor domain YP_002880536.1 PFAM: Domain of unknown function (DUF1737) YP_002880538.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase YP_002880539.1 PFAM: Domain of unknown function (DUF307) YP_002880540.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_002880541.1 PFAM: short chain dehydrogenase YP_002880542.1 PFAM: Acetyltransferase (GNAT) family YP_002880543.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_002880544.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_002880545.1 TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_002880546.1 PFAM: Bacterial regulatory protein, arsR family YP_002880547.1 PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat YP_002880548.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_002880549.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_002880550.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_002880551.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_002880553.1 PFAM: Sir2 family YP_002880556.1 PFAM: Acetyltransferase (GNAT) family YP_002880560.1 PFAM: Siderophore-interacting protein; O-methyltransferase; Siderophore-interacting FAD-binding domain YP_002880562.1 PFAM: ABC transporter YP_002880563.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880564.1 PFAM: Bacterial regulatory protein, arsR family YP_002880565.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: ATPase P; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002880566.1 PFAM: RibD C-terminal domain YP_002880567.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880568.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase YP_002880569.1 PFAM: Glycosyl hydrolases family 16 YP_002880570.1 PFAM: Protein of unknown function (DUF990) YP_002880571.1 PFAM: Protein of unknown function (DUF990) YP_002880572.1 PFAM: ABC transporter YP_002880573.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, subunits gamma and tau YP_002880574.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_002880577.1 PFAM: ABC transporter YP_002880578.1 PFAM: Domain of unknown function DUF81 YP_002880579.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880580.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880581.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002880582.1 PFAM: Aldo/keto reductase family; Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002880583.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880584.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_002880585.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_002880587.1 PFAM: Aminotransferase class I and II YP_002880588.1 PFAM: Major Facilitator Superfamily YP_002880589.1 PFAM: Major Facilitator Superfamily YP_002880590.1 PFAM: Prolyl oligopeptidase family YP_002880591.1 PFAM: Copper resistance protein CopC YP_002880592.1 PFAM: MmgE/PrpD family YP_002880593.1 PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase YP_002880594.1 PFAM: Sulfatase YP_002880595.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880596.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880597.1 PFAM: Bacterial extracellular solute-binding protein YP_002880598.1 PFAM: sugar-binding domain YP_002880599.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate YP_002880600.1 PFAM: NUDIX domain YP_002880601.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_002880602.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_002880603.1 PFAM: Major Facilitator Superfamily YP_002880604.1 multicopy suppressor of dominant negative ftsH mutations YP_002880605.1 PFAM: Protein of unknown function (DUF1116) YP_002880607.1 PFAM: Major Facilitator Superfamily YP_002880608.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP YP_002880609.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_002880610.1 PFAM: RibD C-terminal domain YP_002880611.1 PFAM: alpha/beta hydrolase fold YP_002880613.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002880614.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002880615.1 PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus; SAF domain YP_002880616.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate YP_002880617.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_002880618.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880619.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002880620.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002880621.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880622.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880623.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_002880625.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002880626.1 PFAM: Mannitol dehydrogenase Rossmann domain; Mannitol dehydrogenase C-terminal domain YP_002880627.1 PFAM: Calcineurin-like phosphoesterase YP_002880628.1 PFAM: Transglycosylase; Penicillin binding protein transpeptidase domain; PASTA domain YP_002880629.1 PFAM: Transcription factor WhiB YP_002880631.1 PFAM: Endoribonuclease L-PSP YP_002880632.1 PFAM: Cyclic nucleotide-binding domain YP_002880633.1 PFAM: Methyltransferase domain YP_002880634.1 PFAM: alpha/beta hydrolase fold YP_002880635.1 PFAM: AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_002880636.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002880641.1 PFAM: PAS fold; GAF domain; Stage II sporulation protein E (SpoIIE); TIGRFAM: PAS domain S-box YP_002880643.1 PFAM: Type II/IV secretion system protein YP_002880645.1 PFAM: Bacterial type II secretion system protein F domain YP_002880649.1 PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Domain of unknown function (DUF1998) YP_002880650.1 PFAM: Transcriptional regulatory protein, C terminal YP_002880651.1 PFAM: Cna protein B-type domain; Subtilase family YP_002880652.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_002880654.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002880657.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002880658.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_002880659.1 PFAM: Major Facilitator Superfamily YP_002880661.1 PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form YP_002880662.1 PFAM: Methyltransferase small domain YP_002880664.1 PFAM: NUDIX domain YP_002880666.1 PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase YP_002880667.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate YP_002880668.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002880669.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_002880670.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880671.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880672.1 PFAM: Bacterial extracellular solute-binding protein YP_002880673.1 PFAM: Acetyltransferase (GNAT) family YP_002880674.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002880676.1 PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic YP_002880677.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity YP_002880678.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880679.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002880680.1 PFAM: PAP2 superfamily YP_002880681.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_002880682.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002880683.1 PFAM: Protein of unknown function (DUF664) YP_002880685.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_002880687.1 PFAM: alpha/beta hydrolase fold YP_002880688.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain YP_002880690.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family YP_002880691.1 PFAM: MerR, DNA binding; MerR family regulatory protein YP_002880692.1 PFAM: 'Cold-shock' DNA-binding domain YP_002880693.1 PFAM: Fatty acid desaturase YP_002880695.1 PFAM: NUDIX domain YP_002880696.1 PFAM: Bacterial regulatory proteins, tetR family; Tetracyclin repressor, C-terminal all-alpha domain YP_002880697.1 PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit YP_002880698.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002880699.1 PFAM: NAD dependent epimerase/dehydratase family YP_002880700.1 PFAM: Aldo/keto reductase family YP_002880701.1 PFAM: Bacterial protein of unknown function (DUF839); TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002880704.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002880706.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002880709.1 PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain YP_002880712.1 PFAM: alpha/beta hydrolase fold YP_002880713.1 TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_002880714.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase YP_002880715.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_002880717.1 PFAM: NlpC/P60 family YP_002880719.1 PFAM: Inorganic pyrophosphatase YP_002880720.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family YP_002880722.1 PFAM: Uncharacterised conserved protein (DUF2342) YP_002880723.1 PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain YP_002880724.1 PFAM: phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_002880725.1 PFAM: ATPase family associated with various cellular activities (AAA); FtsH Extracellular; Peptidase family M41; TIGRFAM: ATP-dependent metalloprotease FtsH YP_002880726.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_002880727.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_002880728.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_002880730.1 PFAM: Bacterial membrane flanked domain YP_002880731.1 PFAM: Bacterial membrane flanked domain YP_002880732.1 PFAM: Protein of unknown function (DUF1684) YP_002880734.1 PFAM: NUDIX domain YP_002880736.1 PFAM: MarR family YP_002880737.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880738.1 PFAM: alpha/beta hydrolase fold YP_002880739.1 PFAM: Rossmann-like domain; Pantoate-beta-alanine ligase; Domain of unknown function (DUF2520); TIGRFAM: pantoate--beta-alanine ligase YP_002880740.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002880741.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002880742.1 PFAM: Protein of unknown function (DUF418); Protein of unknown function (DUF405) YP_002880743.1 PFAM: OB-fold nucleic acid binding domain; tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_002880746.1 PFAM: Domain of unknown function (DUF2394) YP_002880747.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_002880748.1 PFAM: pfkB family carbohydrate kinase YP_002880750.1 PFAM: Myo-inositol catabolism protein IolB YP_002880751.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain YP_002880752.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_002880753.1 PFAM: Xylose isomerase-like TIM barrel YP_002880754.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002880755.1 PFAM: phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1 YP_002880756.1 PFAM: Sulfatase YP_002880757.1 PFAM: Protein of unknown function (DUF1254); Protein of unknown function (DUF1214) YP_002880758.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_002880761.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: redox-sensitive transcriptional activator SoxR YP_002880762.1 PFAM: Major Facilitator Superfamily YP_002880764.1 PFAM: Protein of unknown function (DUF664) YP_002880766.1 PFAM: HTH domain YP_002880767.1 PFAM: Metallo-beta-lactamase superfamily YP_002880768.1 PFAM: Bacterial regulatory proteins, luxR family YP_002880771.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1 YP_002880772.1 PFAM: Ion channel YP_002880773.1 PFAM: Mechanosensitive ion channel YP_002880774.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1 YP_002880779.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_002880782.1 PFAM: Protein of unknown function (DUF1269) YP_002880783.1 PFAM: Domain of unknown function (DUF323) YP_002880784.1 PFAM: Sulfatase; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002880785.1 PFAM: Sulfatase YP_002880786.1 PFAM: Sulfatase YP_002880788.1 PFAM: Sulfate transporter family; STAS domain YP_002880789.1 PFAM: Bacterial regulatory proteins, luxR family YP_002880790.1 TIGRFAM: conserved repeat domain; LPXTG-motif cell wall anchor domain YP_002880792.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_002880793.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002880794.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_002880796.1 PFAM: CarD-like/TRCF domain YP_002880797.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002880798.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_002880799.1 PFAM: MarR family YP_002880800.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002880802.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_002880803.1 PFAM: DALR domain; tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase YP_002880804.1 PFAM: RNA 2'-O ribose methyltransferase substrate binding; SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, , group 3 YP_002880807.1 PFAM: ABC transporter YP_002880808.1 PFAM: ABC transporter; TOBE domain YP_002880809.1 PFAM: Aldehyde dehydrogenase family YP_002880810.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002880811.1 PFAM: Dihydrodipicolinate synthetase family YP_002880812.1 PFAM: NAD dependent epimerase/dehydratase family YP_002880813.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002880814.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880815.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880816.1 PFAM: Bacterial extracellular solute-binding protein YP_002880817.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880818.1 PFAM: Trehalose-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase YP_002880819.1 PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming] YP_002880820.1 PFAM: Protein kinase domain YP_002880822.1 PFAM: DSBA-like thioredoxin domain YP_002880823.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002880824.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880825.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880826.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002880828.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002880829.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002880830.1 PFAM: short chain dehydrogenase YP_002880831.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002880833.1 PFAM: WD40-like Beta Propeller Repeat; Prolyl oligopeptidase family YP_002880834.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_002880836.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_002880839.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_002880840.1 PFAM: Glycosyl hydrolases family 15 YP_002880841.1 PFAM: FAD dependent oxidoreductase YP_002880844.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_002880845.1 PFAM: Beta-lactamase YP_002880846.1 PFAM: MgtC family YP_002880847.1 PFAM: CBS domain pair YP_002880848.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002880849.1 PFAM: Glycosyl hydrolases family 32 N terminal YP_002880850.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880851.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880852.1 PFAM: Bacterial extracellular solute-binding protein YP_002880855.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002880856.1 PFAM: short chain dehydrogenase YP_002880857.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2087) YP_002880858.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_002880859.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase YP_002880860.1 PFAM: Proteins of 100 residues with WXG YP_002880862.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; HAMP domain YP_002880863.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_002880865.1 PFAM: PspA/IM30 family YP_002880866.1 PFAM: Domain of unknown function (DUF477) YP_002880867.1 PFAM: Glutamine amidotransferase class-I YP_002880868.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002880869.1 PFAM: Type III restriction enzyme, res subunit; Helicase conserved C-terminal domain YP_002880871.1 PFAM: 'Cold-shock' DNA-binding domain YP_002880873.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002880875.1 PFAM: VTC domain YP_002880877.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_002880878.1 PFAM: Hpt domain YP_002880879.1 PFAM: Response regulator receiver domain YP_002880880.1 PFAM: PAS fold; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box YP_002880881.1 PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent YP_002880883.1 PFAM: phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_002880884.1 PFAM: Major Facilitator Superfamily YP_002880887.1 PFAM: Permease family YP_002880889.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_002880890.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_002880891.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_002880892.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family; Demethylmenaquinone methyltransferase YP_002880893.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase family; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component YP_002880894.1 PFAM: Flavin reductase like domain YP_002880895.1 PFAM: IclR helix-turn-helix domain YP_002880896.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain YP_002880897.1 PFAM: MarR family YP_002880898.1 PFAM: Major Facilitator Superfamily YP_002880901.1 PFAM: Ankyrin repeat YP_002880902.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2185) YP_002880903.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_002880904.1 forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle YP_002880905.1 PFAM: Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, metal binding and dimerisation domain; FeoA domain YP_002880906.1 PFAM: NlpC/P60 family YP_002880907.1 PFAM: Universal stress protein family YP_002880908.1 PFAM: Domain of unknown function (DUF305) YP_002880909.1 PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase YP_002880910.1 PFAM: Amidinotransferase YP_002880911.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_002880912.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_002880914.1 PFAM: BNR/Asp-box repeat YP_002880915.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002880916.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002880917.1 PFAM: Bacterial extracellular solute-binding protein; TAT (twin-arginine translocation) pathway signal sequence YP_002880918.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880919.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880920.1 PFAM: Major Facilitator Superfamily YP_002880921.1 PFAM: Subtilase family YP_002880923.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_002880924.1 PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB YP_002880925.1 PFAM: regulatory protein (CxxC_CxxC_SSSS); TIGRFAM: regulatory protein, FmdB family YP_002880926.1 PFAM: Penicillin amidase YP_002880927.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_002880928.1 PFAM: MoeA C-terminal region (domain IV); Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); TIGRFAM: molybdenum cofactor synthesis domain YP_002880929.1 PFAM: Acetyltransferase (GNAT) family YP_002880931.1 PFAM: NAD dependent epimerase/dehydratase family YP_002880932.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002880933.1 PFAM: Bacterial extracellular solute-binding protein YP_002880934.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880935.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880936.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002880937.1 TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002880938.1 TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002880939.1 PFAM: Xylose isomerase-like TIM barrel YP_002880940.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_002880941.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002880942.1 PFAM: Bacterial extracellular solute-binding protein YP_002880943.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880944.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880945.1 PFAM: Bacterial regulatory proteins, luxR family YP_002880946.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_002880947.1 PFAM: Dioxygenase YP_002880948.1 PFAM: Glycosyl transferase family 2 YP_002880949.1 PFAM: Luciferase-like monooxygenase; FAD binding domain; Berberine and berberine like YP_002880950.1 PFAM: MarR family YP_002880951.1 PFAM: Bacterial regulatory proteins, tetR family YP_002880952.1 PFAM: Aldo/keto reductase family YP_002880953.1 TIGRFAM: conserved hypothetical protein TIGR00026 YP_002880956.1 PFAM: Aminotransferase class-V YP_002880958.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH) YP_002880959.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002880960.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_002880961.1 PFAM: Tetratricopeptide repeat YP_002880963.1 PFAM: Bacterial extracellular solute-binding protein YP_002880964.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880965.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002880966.1 PFAM: Melibiase YP_002880968.1 PFAM: von Willebrand factor A domain YP_002880969.1 PFAM: Transposase YP_002880970.1 PFAM: Glycosyl hydrolase family 20, catalytic domain YP_002880973.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_002880974.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: conserved hypothetical protein TIGR00096 YP_002880975.1 PFAM: Chain length determinant protein; TIGRFAM: capsular exopolysaccharide family YP_002880976.1 PFAM: Glycosyl transferases group 1 YP_002880978.1 PFAM: Glycosyl transferases group 1 YP_002880980.1 PFAM: PA14 domain; Fibronectin type III domain YP_002880981.1 PFAM: Isochorismatase family YP_002880982.1 PFAM: Aminotransferase class I and II YP_002880983.1 PFAM: Tryptophan 2,3-dioxygenase; TIGRFAM: tryptophan 2,3-dioxygenase YP_002880984.1 PFAM: Aminotransferase class-V YP_002880985.1 PFAM: UvrD/REP helicase YP_002880988.1 PFAM: Glucose / Sorbosone dehydrogenase YP_002880990.1 PFAM: MMPL family YP_002880991.1 PFAM: MarR family YP_002880992.1 catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate YP_002880993.1 PFAM: Polyprenyl synthetase YP_002880994.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_002880995.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_002880996.1 PFAM: Domain of unknown function (DUF348); G5 domain YP_002880997.1 PFAM: G5 domain; Transglycosylase-like domain; Domain of unknown function (DUF348) YP_002880998.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_002880999.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_002881000.1 PFAM: ABC transporter YP_002881001.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_002881002.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_002881003.1 PFAM: MarR family YP_002881005.1 PFAM: ABC transporter YP_002881006.1 PFAM: Bacterial regulatory proteins, gntR family YP_002881007.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881008.1 PFAM: Glycosyl transferase family 2 YP_002881009.1 PFAM: Bacterial transferase hexapeptide (three repeats); Uncharacterized protein family UPF0007; Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_002881010.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_002881011.1 PFAM: Protein of unknown function (DUF820) YP_002881012.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_002881013.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_002881015.1 PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related protein domain; glycerol-3-phosphate cytidylyltransferase YP_002881016.1 PFAM: Glycosyl transferase family 2 YP_002881017.1 PFAM: CDP-alcohol phosphatidyltransferase YP_002881018.1 PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF1972) YP_002881020.1 PFAM: PKD domain YP_002881021.1 PFAM: Glycosyl transferase family 2 YP_002881024.1 PFAM: Glycosyl transferases group 1 YP_002881026.1 PFAM: Chain length determinant protein; TIGRFAM: capsular exopolysaccharide family YP_002881027.1 PFAM: MviN-like protein YP_002881028.1 PFAM: Glycosyl transferase family 2 YP_002881029.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_002881030.1 PFAM: GtrA-like protein; Glycosyl transferase family 2 YP_002881032.1 PFAM: Acyltransferase family YP_002881033.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002881035.1 PFAM: AIG2-like family YP_002881036.1 PFAM: TRCF domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase; CarD-like/TRCF domain; TIGRFAM: transcription-repair coupling factor (mfd) YP_002881037.1 PFAM: Calcineurin-like phosphoesterase YP_002881039.1 PFAM: phosphoglycerate mutase family YP_002881040.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era YP_002881041.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_002881042.1 PFAM: Septum formation initiator YP_002881043.1 PFAM: Protein of unknown function (DUF501) YP_002881044.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_002881045.1 PFAM: Ppx/GppA phosphatase family YP_002881048.1 PFAM: Transcriptional regulator PadR-like family YP_002881050.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_002881051.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_002881052.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_002881054.1 PFAM: Transcriptional regulator PadR-like family YP_002881055.1 PFAM: Protein of unknown function (DUF1048) YP_002881056.1 PFAM: ABC transporter YP_002881057.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002881059.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_002881062.1 PFAM: NAD dependent epimerase/dehydratase family YP_002881063.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002881064.1 PFAM: DNA polymerase family A YP_002881065.1 PFAM: Protein of unknown function DUF88 YP_002881066.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; ATPase P; copper-(or silver)-translocating P-type ATPase YP_002881071.1 PFAM: Acetyltransferase (GNAT) family YP_002881072.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002881073.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002881075.1 PFAM: ABC transporter YP_002881076.1 PFAM: Protein of unknown function (DUF1112) YP_002881077.1 PFAM: CBS domain pair; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase YP_002881078.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_002881079.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002881080.1 PFAM: Bacterial regulatory protein, arsR family YP_002881081.1 PFAM: Acetyl xylan esterase (AXE1) YP_002881082.1 PFAM: Major Facilitator Superfamily YP_002881083.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_002881084.1 PFAM: Protein of unknown function (DUF664) YP_002881085.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002881086.1 PFAM: Bacterial regulatory protein, arsR family YP_002881087.1 PFAM: PHP domain YP_002881088.1 PFAM: Calcineurin-like phosphoesterase; Bacterial Ig-like domain (group 2) YP_002881089.1 PFAM: phosphotransferase enzyme family YP_002881090.1 PFAM: Protein of unknown function (DUF503) YP_002881091.1 PFAM: CAAX amino terminal protease family YP_002881092.1 TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083 YP_002881093.1 PFAM: NmrA-like family YP_002881094.1 PFAM: HxlR-like helix-turn-helix YP_002881095.1 PFAM: Methyltransferase domain YP_002881096.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_002881097.1 PFAM: ACT domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form YP_002881098.1 PFAM: Prokaryotic transcription elongation factor, GreA/GreB, N-terminal domain; Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain; TIGRFAM: transcription elongation factor GreA YP_002881100.1 PFAM: Protein of unknown function (DUF418); Protein of unknown function (DUF405) YP_002881101.1 PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: mycothiol conjugate amidase Mca YP_002881103.1 PFAM: Carbon-nitrogen hydrolase YP_002881104.1 PFAM: Polyphosphate kinase 2 YP_002881105.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_002881106.1 PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_002881107.1 PFAM: PhoH-like protein YP_002881108.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_002881109.1 PFAM: FAD dependent oxidoreductase YP_002881110.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_002881111.1 PFAM: Chlorite dismutase YP_002881112.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881114.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881115.1 PFAM: FAD dependent oxidoreductase YP_002881116.1 PFAM: Carbonic anhydrase YP_002881117.1 PFAM: Bacterial extracellular solute-binding protein YP_002881118.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881119.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881120.1 PFAM: ABC transporter YP_002881121.1 PFAM: pfkB family carbohydrate kinase YP_002881122.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_002881123.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_002881124.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_002881125.1 PFAM: RmuC family YP_002881126.1 PFAM: phosphotransferase enzyme family YP_002881127.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_002881131.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002881136.1 PFAM: Bacterial-like globin YP_002881137.1 TIGRFAM: conserved hypothetical protein TIGR00026 YP_002881138.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002881139.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881140.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881142.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_002881143.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_002881144.1 PFAM: Elongation factor Tu GTP binding domain; Elongation factor G C-terminus; Elongation factor Tu domain 2; TIGRFAM: small GTP-binding protein domain; GTP-binding protein TypA/BipA YP_002881145.1 PFAM: Bacterial transcription activator, effector binding domain YP_002881146.1 PFAM: GlcNAc-PI de-N-acetylase YP_002881147.1 PFAM: Flavin reductase like domain YP_002881148.1 PFAM: VanW like protein YP_002881150.1 PFAM: 4Fe-4S binding domain YP_002881151.1 PFAM: Aminotransferase class I and II YP_002881152.1 PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_002881155.1 PFAM: Major Facilitator Superfamily YP_002881156.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002881157.1 PFAM: META domain YP_002881158.1 PFAM: NUDIX domain YP_002881159.1 PFAM: Biotin carboxylase C-terminal domain; Biotin-requiring enzyme; Carbamoyl-phosphate synthase L chain, N-terminal domain; phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YP_002881160.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002881161.1 PFAM: Acetyltransferase (GNAT) family YP_002881162.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_002881163.1 PFAM: NUDIX domain YP_002881164.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881165.1 PFAM: NAD dependent epimerase/dehydratase family YP_002881166.1 PFAM: Bacterial protein of unknown function (DUF885) YP_002881167.1 PFAM: Protein of unknown function (DUF1037) YP_002881168.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002881169.1 PFAM: short chain dehydrogenase YP_002881170.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881172.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine YP_002881174.1 PFAM: Carboxyl transferase domain YP_002881175.1 PFAM: Biotin/lipoate A/B protein ligase family; Biotin protein ligase C terminal domain; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_002881176.1 PFAM: Adenylate and Guanylate cyclase catalytic domain YP_002881177.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_002881178.1 PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002881179.1 PFAM: GtrA-like protein YP_002881180.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_002881181.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_002881182.1 PFAM: Acyltransferase family YP_002881183.1 PFAM: Glycosyl transferase family 2 YP_002881185.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; TIGRFAM: nucleotide sugar dehydrogenase YP_002881186.1 PFAM: CoA binding domain YP_002881187.1 PFAM: Cell envelope-related protein transcriptional attenuator domain; TIGRFAM: cell envelope-related protein function transcriptional attenuator common domain YP_002881188.1 PFAM: Cell envelope-related protein transcriptional attenuator domain; TIGRFAM: cell envelope-related protein function transcriptional attenuator common domain YP_002881189.1 PFAM: Cell envelope-related protein transcriptional attenuator domain; TIGRFAM: cell envelope-related protein function transcriptional attenuator common domain YP_002881190.1 PFAM: NAD dependent epimerase/dehydratase family YP_002881191.1 PFAM: Glycosyl transferase family 2 YP_002881192.1 PFAM: Acyltransferase family YP_002881193.1 PFAM: FAD dependent oxidoreductase; UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase YP_002881194.1 PFAM: phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_002881197.1 PFAM: Methyltransferase domain; LICD Protein Family YP_002881200.1 PFAM: Glycosyl transferase family 2 YP_002881201.1 PFAM: Stage II sporulation protein; FG-GAP repeat; TIGRFAM: SpoIID/LytB domain YP_002881202.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_002881203.1 PFAM: NAD dependent epimerase/dehydratase family YP_002881204.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_002881205.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002881206.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_002881207.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_002881209.1 PFAM: FAD dependent oxidoreductase YP_002881210.1 PFAM: FG-GAP repeat; N-acetylmuramoyl-L-alanine amidase YP_002881211.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_002881212.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_002881213.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_002881214.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Glycosyl transferase family 2; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002881215.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Glycosyl transferase family 2 YP_002881216.1 PFAM: Glycosyl transferases group 1; TIGRFAM: methyltransferase, FkbM family YP_002881217.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_002881218.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_002881219.1 PFAM: Glycosyl transferase family 2 YP_002881220.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_002881221.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Glycosyl transferase family 2 YP_002881222.1 PFAM: Glycosyl transferases group 1 YP_002881223.1 PFAM: Methyltransferase domain YP_002881224.1 PFAM: LICD Protein Family YP_002881225.1 PFAM: Macrocin-O-methyltransferase (TylF) YP_002881226.1 PFAM: Methyltransferase domain YP_002881227.1 TIGRFAM: conserved hypothetical protein TIGR03089 YP_002881228.1 PFAM: Transcription factor WhiB YP_002881231.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_002881234.1 PFAM: Bacterial regulatory protein, arsR family YP_002881235.1 PFAM: Major Facilitator Superfamily YP_002881238.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase YP_002881239.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002881242.1 PFAM: ABC-2 type transporter YP_002881243.1 PFAM: ABC transporter YP_002881244.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_002881245.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_002881246.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH) YP_002881247.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_002881248.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881249.1 PFAM: CBS domain pair; ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_002881250.1 PFAM: phosphotransferase enzyme family YP_002881251.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_002881252.1 PFAM: TOBE domain; MerR family regulatory protein; TIGRFAM: molybdenum-pterin binding domain; DNA binding domain, excisionase family YP_002881253.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_002881254.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; NifC-like ABC-type porter YP_002881255.1 PFAM: ABC transporter; TOBE domain YP_002881256.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_002881257.1 PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit YP_002881258.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002881260.1 PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA YP_002881262.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_002881263.1 PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002881264.1 PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination YP_002881265.1 PFAM: phosphoribosyl transferase domain YP_002881266.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_002881267.1 PFAM: Protein of unknown function (DUF1006) YP_002881268.1 PFAM: SecA Wing and Scaffold domain; SecA DEAD-like domain; TIGRFAM: preprotein translocase, SecA subunit YP_002881269.1 PFAM: Bacterial regulatory proteins, luxR family YP_002881274.1 PFAM: Carbohydrate binding domain; Glycosyl hydrolase family 10; Domain of unknown function (DUF1083) YP_002881276.1 PFAM: LysM domain YP_002881278.1 PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family YP_002881279.1 PFAM: SAF domain YP_002881283.1 PFAM: Inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family YP_002881284.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: GTP-binding conserved hypothetical protein; ribosome small subunit-dependent GTPase A YP_002881285.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002881286.1 PFAM: DoxX YP_002881287.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family YP_002881288.1 TIGRFAM: anti-sigma factor, TIGR02949 family YP_002881289.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_002881293.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DJ-1/PfpI family YP_002881294.1 PFAM: Bacterial regulatory proteins, luxR family YP_002881296.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth YP_002881297.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; HAMP domain YP_002881298.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_002881299.1 PFAM: Peptidase family M23 YP_002881300.1 PFAM: Aldose 1-epimerase YP_002881302.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_002881303.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain YP_002881304.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_002881305.1 PFAM: GHMP kinases N terminal domain; TIGRFAM: homoserine kinase YP_002881306.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho YP_002881307.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_002881308.1 PFAM: RF-1 domain; PCRF domain; TIGRFAM: peptide chain release factor 1 YP_002881309.1 PFAM: Methyltransferase domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; HemK family methylases YP_002881311.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_002881312.1 PFAM: Glycosyl transferase family 4 YP_002881314.1 PFAM: Glycosyl hydrolase family 20, catalytic domain YP_002881315.1 PFAM: PhoD-like phosphatase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881316.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002881317.1 PFAM: Bacterial extracellular solute-binding protein YP_002881318.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881319.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881320.1 PFAM: FAD binding domain YP_002881321.1 can hydrolyze p-nitrophenyl sulfate; contains a specific cysteine that is converted into C{alpha]-formylglycine upon activation with the anaerobic sulfatase-maturase YP_002881322.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_002881323.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_002881324.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_002881325.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_002881326.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002881327.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_002881328.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002881329.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_002881330.1 PFAM: Protein of unknown function (DUF2550) YP_002881331.1 PFAM: Protein of unknown function DUF91 YP_002881332.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881334.1 PFAM: Domain of unknown function (DUF1990) YP_002881335.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_002881337.1 PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain YP_002881338.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002881339.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_002881340.1 PFAM: Bacterial extracellular solute-binding protein YP_002881341.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881342.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881343.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002881344.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides YP_002881346.1 PFAM: ABC transporter YP_002881347.1 PFAM: alpha/beta hydrolase fold YP_002881350.1 PFAM: Acetyltransferase (GNAT) family YP_002881354.1 PFAM: Thioredoxin YP_002881355.1 PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, C-terminal all-beta domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase YP_002881356.1 PFAM: phosphotransferase enzyme family; TIGRFAM: trehalose synthase-fused probable maltokinase YP_002881357.1 PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase YP_002881358.1 PFAM: Alpha amylase, catalytic domain YP_002881359.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases YP_002881361.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_002881364.1 PFAM: RDD family YP_002881365.1 PFAM: FAD dependent oxidoreductase YP_002881366.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX YP_002881367.1 PFAM: Electron transfer flavoprotein domain YP_002881368.1 PFAM: Electron transfer flavoprotein FAD-binding domain; Electron transfer flavoprotein domain YP_002881369.1 PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_002881370.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881371.1 PFAM: ROK family YP_002881372.1 PFAM: ABC transporter YP_002881373.1 PFAM: Branched-chain amino acid transport system / permease component YP_002881374.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family YP_002881375.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002881376.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_002881378.1 PFAM: phosphotransferase enzyme family YP_002881380.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002881381.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002881382.1 PFAM: Aminotransferase class-V YP_002881383.1 PFAM: NAD dependent epimerase/dehydratase family YP_002881384.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002881390.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002881391.1 PFAM: Bacterial regulatory proteins, tetR family; Tetracyclin repressor, C-terminal all-alpha domain YP_002881396.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB YP_002881398.1 PFAM: LamB/YcsF family YP_002881399.1 PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370 YP_002881400.1 PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain YP_002881402.1 PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: glycosyltransferase, MGT family YP_002881403.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881404.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit YP_002881405.1 PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit YP_002881406.1 PFAM: PET112 family, C terminal region; GatB domain; PET112 family, N terminal region; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit YP_002881408.1 PFAM: Acetyltransferase (GNAT) family YP_002881409.1 PFAM: Periplasmic solute binding protein family YP_002881410.1 PFAM: ABC transporter YP_002881411.1 PFAM: ABC 3 transport family YP_002881412.1 PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_002881414.1 PFAM: Protein of unknown function (DUF1343) YP_002881415.1 PFAM: Helix-turn-helix domain, rpiR family; SIS domain YP_002881416.1 PFAM: GlcNAc-PI de-N-acetylase YP_002881417.1 PFAM: Acetyltransferase (GNAT) family YP_002881418.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002881419.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002881420.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881421.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; Binding-protein-dependent transport system inner membrane component; ABC transporter YP_002881422.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_002881423.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_002881424.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_002881426.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002881427.1 PFAM: Pterin 4 alpha carbinolamine dehydratase YP_002881428.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate YP_002881429.1 PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit YP_002881430.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002881431.1 PFAM: alpha/beta hydrolase fold YP_002881432.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: endonuclease III YP_002881434.1 PFAM: SMP-30/Gluconolaconase/LRE-like region YP_002881435.1 PFAM: ASCH domain YP_002881437.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_002881438.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II YP_002881439.1 PFAM: Luciferase-like monooxygenase YP_002881440.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881442.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein YP_002881443.1 PFAM: Helix-turn-helix; Cupin domain YP_002881444.1 PFAM: FAD dependent oxidoreductase YP_002881446.1 PFAM: Uncharacterised BCR (COG3801) YP_002881448.1 PFAM: Biotin/lipoate A/B protein ligase family YP_002881449.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: uncharacterized HhH-GPD family protein YP_002881450.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002881451.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_002881452.1 PFAM: Pentapeptide repeats (8 copies) YP_002881454.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_002881455.1 PFAM: Dihydrodipicolinate synthetase family YP_002881457.1 PFAM: Bacterial extracellular solute-binding protein YP_002881458.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881459.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881461.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_002881462.1 PFAM: Protein of unknown function (DUF2510) YP_002881463.1 PFAM: Protein of unknown function (DUF2510); Bacterial pre-peptidase C-terminal domain YP_002881464.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_002881465.1 PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family YP_002881467.1 PFAM: Alpha-L-fucosidase YP_002881468.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA YP_002881469.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_002881470.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_002881471.1 PFAM: Amidohydrolase family YP_002881472.1 PFAM: SMP-30/Gluconolaconase/LRE-like region YP_002881473.1 PFAM: short chain dehydrogenase YP_002881474.1 PFAM: Bacterial extracellular solute-binding protein YP_002881475.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881476.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881477.1 PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain YP_002881478.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_002881479.1 PFAM: Protein of unknown function (DUF1485); MlrC C-terminus YP_002881480.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002881481.1 PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase YP_002881482.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_002881483.1 PFAM: Major Facilitator Superfamily YP_002881484.1 PFAM: Methyltransferase domain YP_002881486.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_002881487.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002881488.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881489.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881490.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881492.1 PFAM: ADP-ribosylglycohydrolase YP_002881493.1 PFAM: ADP-ribosylglycohydrolase YP_002881494.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002881497.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_002881498.1 PFAM: glycosyl hydrolase of unknown function (DUF1680) YP_002881499.1 PFAM: Alpha amylase, catalytic domain YP_002881500.1 PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: hydrolase, CocE/NonD family YP_002881501.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881502.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881503.1 PFAM: Bacterial extracellular solute-binding protein YP_002881504.1 PFAM: short chain dehydrogenase YP_002881505.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_002881506.1 PFAM: phosphotransferase enzyme family YP_002881507.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_002881508.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_002881509.1 PFAM: ROK family YP_002881510.1 PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain YP_002881513.1 PFAM: N-6 DNA Methylase YP_002881514.1 PFAM: Type I restriction modification DNA specificity domain YP_002881515.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002881516.1 PFAM: MTH538 TIR-like domain (DUF1863) YP_002881517.1 PFAM: HIT domain YP_002881518.1 PFAM: Protein of unknown function DUF262 YP_002881519.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881520.1 PFAM: PhoD-like phosphatase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881521.1 PFAM: 3-dehydroquinate synthase YP_002881522.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA YP_002881523.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_002881524.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881525.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881526.1 PFAM: Bacterial extracellular solute-binding protein YP_002881527.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002881528.1 PFAM: FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain; TIGRFAM: L-ribulokinase; FGGY-family pentulose kinase YP_002881529.1 PFAM: DeoR-like helix-turn-helix domain; Bacterial regulatory proteins, deoR family YP_002881530.1 PFAM: Dihydrodipicolinate synthetase family YP_002881532.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881533.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881534.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881535.1 PFAM: FCD domain; Bacterial regulatory proteins, gntR family YP_002881537.1 PFAM: MarR family YP_002881538.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002881540.1 PFAM: Bacterial extracellular solute-binding protein YP_002881541.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881542.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881543.1 PFAM: ABC transporter YP_002881544.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_002881545.1 PFAM: Bacterial extracellular solute-binding protein YP_002881546.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881547.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881548.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_002881549.1 PFAM: Glucose inhibited division protein A YP_002881550.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881551.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881552.1 PFAM: Bacterial extracellular solute-binding protein YP_002881553.1 PFAM: Helix-turn-helix; Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002881554.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002881555.1 PFAM: NUDIX domain YP_002881556.1 PFAM: FCD domain; Bacterial regulatory proteins, gntR family YP_002881557.1 PFAM: Glycosyl hydrolases family 39 YP_002881558.1 PFAM: Aldo/keto reductase family YP_002881559.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881560.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881561.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881562.1 PFAM: short chain dehydrogenase YP_002881563.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YP_002881564.1 PFAM: Xylose isomerase-like TIM barrel YP_002881565.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_002881566.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase YP_002881567.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002881568.1 PFAM: Inositol monophosphatase family YP_002881569.1 PFAM: Beta-lactamase YP_002881571.1 PFAM: YCII-related protein domain YP_002881572.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002881573.1 PFAM: ABC transporter YP_002881574.1 PFAM: ABC transporter YP_002881575.1 PFAM: Predicted permease YP_002881576.1 PFAM: Predicted permease YP_002881579.1 PFAM: Methyltransferase domain YP_002881581.1 PFAM: MerR family regulatory protein YP_002881582.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family; Domain of unknown function (DUF2437) YP_002881583.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002881584.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-haloalkanoic acid dehalogenase, type II YP_002881585.1 PFAM: Acetyltransferase (GNAT) family YP_002881586.1 TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_002881587.1 PFAM: Acetyltransferase (GNAT) family YP_002881589.1 PFAM: UvrD/REP helicase YP_002881590.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_002881591.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_002881592.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_002881593.1 PFAM: Bacterial NAD-glutamate dehydrogenase YP_002881595.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002881596.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002881597.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881598.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881599.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881601.1 PFAM: Luciferase-like monooxygenase YP_002881603.1 PFAM: ABC transporter YP_002881604.1 PFAM: ABC-2 type transporter YP_002881605.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_002881606.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002881607.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_002881608.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YP_002881609.1 PFAM: Glycosyl hydrolases family 2, sugar binding domain YP_002881610.1 PFAM: Major Facilitator Superfamily YP_002881612.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_002881613.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_002881615.1 PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_002881616.1 PFAM: Acetyltransferase (GNAT) family YP_002881617.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_002881618.1 PFAM: OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase RecG YP_002881619.1 PFAM: ABC transporter YP_002881621.1 PFAM: Major Facilitator Superfamily YP_002881622.1 PFAM: RNA methylase family UPF0020; TIGRFAM: methyltransferase YP_002881623.1 PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related protein domain; pantetheine-phosphate adenylyltransferase, bacterial YP_002881625.1 PFAM: Uncharacterized ACR, COG1399 YP_002881626.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_002881627.1 PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial YP_002881628.1 PFAM: Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase H2TH domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_002881629.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002881631.1 PFAM: Histidine kinase; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002881632.1 PFAM: ABC transporter; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YP_002881633.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YP_002881634.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_002881635.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_002881636.1 PFAM: Ribonuclease E/G family; TIGRFAM: ribonuclease, Rne/Rng family YP_002881638.1 PFAM: Peptidase family S51 YP_002881639.1 PFAM: Protein of unknown function (DUF1458) YP_002881640.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_002881641.1 involved in the peptidyltransferase reaction during translation YP_002881642.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_002881643.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_002881644.1 PFAM: pfkB family carbohydrate kinase YP_002881645.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: Entner-Doudoroff aldolase YP_002881647.1 PFAM: MerR family regulatory protein YP_002881648.1 PFAM: Transglutaminase-like superfamily YP_002881652.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related protein domain YP_002881654.1 PFAM: Domain of Unknown Function (DUF1080); Glycerophosphoryl diester phosphodiesterase family YP_002881655.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein protein YP_002881656.1 PFAM: phosphoglycerate mutase family YP_002881657.1 PFAM: Methyltransferase domain YP_002881664.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_002881667.1 PFAM: Calcineurin-like phosphoesterase YP_002881668.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_002881669.1 PFAM: LysE type translocator; TIGRFAM: L-lysine exporter YP_002881670.1 PFAM: Methyltransferase domain YP_002881671.1 PFAM: Acetyltransferase (GNAT) family YP_002881672.1 PFAM: ROK family YP_002881673.1 PFAM: Bacterial extracellular solute-binding protein YP_002881674.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881675.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881676.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002881677.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002881678.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002881680.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB YP_002881681.1 PFAM: Ankyrin repeat YP_002881682.1 PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881683.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_002881684.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002881685.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family methylases YP_002881686.1 PFAM: phosphotransferase enzyme family YP_002881687.1 PFAM: GAF domain; ANTAR domain YP_002881688.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_002881689.1 PFAM: FAD binding domain YP_002881690.1 PFAM: ROK family YP_002881692.1 PFAM: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain YP_002881693.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_002881694.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_002881695.1 PFAM: Luciferase-like monooxygenase YP_002881696.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain YP_002881697.1 PFAM: Amidohydrolase family YP_002881698.1 PFAM: Bacterial extracellular solute-binding protein YP_002881699.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881700.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881701.1 PFAM: Amidohydrolase family YP_002881702.1 PFAM: Major Facilitator Superfamily YP_002881703.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_002881704.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_002881705.1 PFAM: Luciferase-like monooxygenase YP_002881706.1 PFAM: XdhC and CoxI family YP_002881708.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_002881709.1 PFAM: ThiS family YP_002881711.1 PFAM: MoaE protein YP_002881712.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_002881713.1 PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family YP_002881714.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002881716.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881717.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881718.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881719.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002881720.1 PFAM: YCII-related protein domain YP_002881721.1 PFAM: RbsD / FucU transport protein family YP_002881722.1 PFAM: SIS domain; TIGRFAM: KpsF/GutQ family protein YP_002881723.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_002881726.1 PFAM: Bacterial extracellular solute-binding protein YP_002881727.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881728.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881729.1 PFAM: Bacterial extracellular solute-binding protein YP_002881730.1 PFAM: Protein of unknown function, DUF608 YP_002881733.1 PFAM: Calcineurin-like phosphoesterase YP_002881734.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_002881737.1 PFAM: Vitamin K epoxide reductase family YP_002881739.1 PFAM: Domain of unknown function DUF21; CBS domain pair YP_002881740.1 PFAM: CBS domain pair; Domain of unknown function DUF21; Transporter associated domain YP_002881741.1 PFAM: Luciferase-like monooxygenase YP_002881742.1 PFAM: MarR family YP_002881743.1 PFAM: NADPH-dependent FMN reductase YP_002881744.1 PFAM: MarR family YP_002881746.1 PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026 YP_002881747.1 PFAM: Ferritin-like domain YP_002881748.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_002881749.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002881750.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002881751.1 PFAM: alpha/beta hydrolase fold YP_002881752.1 PFAM: RibD C-terminal domain YP_002881753.1 PFAM: alpha/beta hydrolase fold YP_002881754.1 PFAM: Bacterial protein of unknown function (DUF853) YP_002881755.1 PFAM: SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_002881756.1 PFAM: Metallo-beta-lactamase superfamily; Competence protein; TIGRFAM: DNA internalization-related protein competence protein ComEC/Rec2; ComEC/Rec2-related protein protein YP_002881757.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_002881758.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002881762.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002881763.1 PFAM: HemN C-terminal region; Radical SAM superfamily; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_002881766.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_002881767.1 PFAM: DnaJ domain; DnaJ central domain (4 repeats); DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ YP_002881768.1 PFAM: PhoH-like protein YP_002881769.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043 YP_002881770.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; GTP-binding conserved hypothetical protein; small GTP-binding protein domain YP_002881773.1 PFAM: Protein phosphatase 2C YP_002881774.1 PFAM: FHA domain YP_002881775.1 PFAM: Protein kinase domain YP_002881777.1 PFAM: Fibronectin type III domain YP_002881778.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_002881779.1 PFAM: Protein of unknown function DUF58 YP_002881780.1 PFAM: Transglutaminase-like superfamily YP_002881781.1 PFAM: FHA domain YP_002881782.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type YP_002881783.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_002881784.1 PFAM: Recombination protein O; TIGRFAM: DNA repair protein RecO YP_002881785.1 PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_002881786.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002881787.1 PFAM: RibD C-terminal domain YP_002881788.1 PFAM: Uncharacterised BCR, COG1649; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881790.1 PFAM: Ferric uptake regulator family YP_002881791.1 PFAM: ABC 3 transport family YP_002881792.1 PFAM: ABC transporter YP_002881793.1 PFAM: Periplasmic solute binding protein family YP_002881794.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002881795.1 PFAM: YibE/F-like protein YP_002881797.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family YP_002881798.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002881799.1 PFAM: Bacterial extracellular solute-binding protein YP_002881800.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881801.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881802.1 PFAM: Uncharacterized conserved protein (DUF2277) YP_002881803.1 PFAM: Alpha amylase, catalytic domain YP_002881804.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, ; uncharacterized domain HDIG YP_002881806.1 synthesizes RNA primers at the replication forks YP_002881807.1 PFAM: Acetyltransferase (GNAT) family YP_002881811.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain YP_002881812.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_002881813.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881814.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881815.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002881817.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_002881821.1 PFAM: Acetyltransferase (GNAT) family YP_002881822.1 PFAM: Beta-ketoacyl synthase, C-terminal domain; Beta-ketoacyl synthase, N-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2 YP_002881823.1 carries the fatty acid chain in fatty acid biosynthesis YP_002881824.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_002881828.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_002881830.1 PFAM: AhpC/TSA family YP_002881831.1 PFAM: CAAX amino terminal protease family YP_002881833.1 PFAM: Predicted integral membrane protein (DUF2266) YP_002881834.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002881835.1 PFAM: RibD C-terminal domain YP_002881836.1 PFAM: RibD C-terminal domain YP_002881838.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002881839.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002881840.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_002881841.1 TIGRFAM: conserved hypothetical protein TIGR00026 YP_002881842.1 PFAM: Protein of unknown function (DUF1089) YP_002881844.1 PFAM: Methyltransferase domain YP_002881846.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486 YP_002881848.1 PFAM: phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_002881851.1 PFAM: Helix-turn-helix YP_002881852.1 PFAM: Protein of unknown function (DUF328) YP_002881853.1 PFAM: Arginase family YP_002881854.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_002881855.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_002881856.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_002881857.1 catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_002881858.1 TIGRFAM: conserved hypothetical protein YP_002881859.1 PFAM: MarR family YP_002881861.1 PFAM: DNA alkylation repair enzyme YP_002881862.1 PFAM: Metallo-beta-lactamase superfamily YP_002881863.1 PFAM: ROK family YP_002881865.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002881866.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_002881867.1 PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I YP_002881868.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme YP_002881869.1 PFAM: Bacterial regulatory proteins, luxR family YP_002881872.1 PFAM: SNARE associated Golgi protein YP_002881873.1 PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I YP_002881874.1 PFAM: RDD family YP_002881876.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002881877.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_002881878.1 PFAM: Protein kinase domain YP_002881879.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777 YP_002881880.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase YP_002881881.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_002881884.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002881885.1 PFAM: FAD binding domain; FAD dependent oxidoreductase YP_002881886.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_002881887.1 PFAM: sugar-binding domain YP_002881888.1 PFAM: Bacterial extracellular solute-binding protein YP_002881889.1 PFAM: Protein of unknown function, DUF624 YP_002881890.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881891.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881892.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain YP_002881895.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_002881897.1 PFAM: Aldo/keto reductase family YP_002881899.1 PFAM: Peptidase family M20/M25/M40 YP_002881900.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_002881901.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_002881902.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_002881903.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome c oxidase, subunit II YP_002881904.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I YP_002881906.1 PFAM: Iron/manganese superoxide dismutases, C-terminal domain; Iron/manganese superoxide dismutases, alpha-hairpin domain YP_002881907.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_002881908.1 PFAM: Rieske [2Fe-2S] domain YP_002881909.1 PFAM: Cytochrome c YP_002881910.1 PFAM: Cytochrome c oxidase subunit III YP_002881911.1 PFAM: Response regulator receiver domain YP_002881912.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_002881913.1 PFAM: AsnC family YP_002881914.1 NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate YP_002881915.1 PFAM: Bacterial regulatory proteins, tetR family YP_002881916.1 PFAM: Alanine racemase, N-terminal domain YP_002881917.1 PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain; TIGRFAM: FAD-linked oxidoreductase YP_002881918.1 contains 3'-5'exonuclease domain YP_002881919.1 PFAM: AMP-binding enzyme YP_002881920.1 PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase) YP_002881922.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_002881923.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate YP_002881924.1 PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II YP_002881925.1 PFAM: Oxidoreductase molybdopterin binding domain YP_002881926.1 PFAM: Protein kinase domain; PASTA domain YP_002881929.1 PFAM: Polyprenyl synthetase YP_002881931.1 PFAM: Universal stress protein family YP_002881932.1 PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: glycine cleavage system T protein; sarcosine oxidase, gamma subunit family, heterotetrameric form YP_002881933.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_002881934.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_002881935.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released YP_002881936.1 PFAM: LysR substrate binding domain YP_002881938.1 PFAM: Acetyltransferase (GNAT) family YP_002881940.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002881941.1 PFAM: Methyltransferase domain YP_002881942.1 PFAM: Acetyltransferase (GNAT) family YP_002881943.1 PFAM: Acetyltransferase (GNAT) family YP_002881944.1 PFAM: Peptidase family M20/M25/M40 YP_002881945.1 PFAM: C4-dicarboxylate anaerobic carrier YP_002881946.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002881947.1 PFAM: Acetyltransferase (GNAT) family YP_002881949.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_002881950.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_002881952.1 PFAM: Inositol monophosphatase family YP_002881955.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_002881957.1 PFAM: OB-fold nucleic acid binding domain YP_002881958.1 PFAM: TrkA-N domain; TrkA-C domain YP_002881959.1 PFAM: TrkA-N domain; TrkA-C domain YP_002881961.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_002881962.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002881963.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1 YP_002881964.1 PFAM: Serpin (serine protease inhibitor) YP_002881965.1 PFAM: phosphotransferase enzyme family YP_002881966.1 PFAM: NUDIX domain YP_002881967.1 PFAM: UPF0126 domain YP_002881968.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_002881969.1 PFAM: YCII-related protein domain YP_002881970.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881971.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002881972.1 PFAM: Bacterial extracellular solute-binding protein YP_002881973.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002881974.1 PFAM: Amylo-alpha-1,6-glucosidase YP_002881975.1 PFAM: Transketolase, pyrimidine binding domain; Transketolase, C-terminal domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_002881977.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_002881978.1 PFAM: Thiolase, N-terminal domain; Thiolase, C-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_002881979.1 PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D YP_002881980.1 PFAM: Domain of unknown function (DUF1905) YP_002881985.1 PFAM: AFG1-like ATPase YP_002881987.1 PFAM: HIT domain YP_002881988.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose trehalohydrolase YP_002881989.1 PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase YP_002881990.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX YP_002881992.1 PFAM: Predicted membrane protein (DUF2319) YP_002881994.1 PFAM: Aminotransferase class IV YP_002881995.1 PFAM: Dihydrodipicolinate synthetase family YP_002881996.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_002881997.1 PFAM: HIT domain YP_002881998.1 PFAM: CDP-alcohol phosphatidyltransferase YP_002881999.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_002882000.1 PFAM: Glycosyl transferases group 1 YP_002882003.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002882004.1 PFAM: NUDIX domain YP_002882005.1 PFAM: SNO glutamine amidotransferase family YP_002882006.1 PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033 YP_002882008.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_002882009.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_002882010.1 PFAM: RuvA N terminal domain; RuvA, C-terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_002882011.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; ATPase family associated with various cellular activities (AAA); Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_002882012.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_002882013.1 PFAM: SecD/SecF GG Motif; PT repeat; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_002882014.1 PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_002882015.1 PFAM: phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_002882016.1 PFAM: Region found in RelA / SpoT proteins; HD domain; ACT domain; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_002882018.1 PFAM: Domain of Unknown Function (DUF349) YP_002882019.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_002882020.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_002882021.1 PFAM: Radical SAM superfamily YP_002882022.1 PFAM: DbpA RNA binding domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_002882023.1 PFAM: Aminotransferase class I and II YP_002882024.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_002882025.1 PFAM: Acetyltransferase (GNAT) family YP_002882027.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_002882028.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_002882029.1 PFAM: Bacterial protein of unknown function (DUF948) YP_002882031.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002882032.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250 YP_002882033.1 PFAM: Aminodeoxychorismate lyase YP_002882034.1 PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase YP_002882035.1 PFAM: Type IV leader peptidase family YP_002882036.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002882037.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_002882038.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_002882039.1 PFAM: Bacterial regulatory protein, arsR family YP_002882042.1 PFAM: alpha/beta hydrolase fold YP_002882044.1 PFAM: RibD C-terminal domain YP_002882045.1 PFAM: Beta-lactamase YP_002882048.1 PFAM: Elongation factor P (EF-P) OB domain; Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; TIGRFAM: translation elongation factor P YP_002882049.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_002882050.1 PFAM: phosphoribosyl transferase domain YP_002882051.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_002882052.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_002882054.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_002882055.1 PFAM: MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_002882056.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_002882059.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_002882060.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_002882061.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_002882062.1 PFAM: S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, C-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_002882063.1 TIGRFAM: primosomal protein N' YP_002882064.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_002882065.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_002882066.1 PFAM: NusB family; NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_002882067.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_002882068.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882069.1 PFAM: NMT1/THI5 like YP_002882070.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis YP_002882071.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_002882072.1 PFAM: Protein of unknown function (DUF2581) YP_002882073.1 PFAM: Protein of unknown function (DUF952) YP_002882077.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_002882078.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_002882079.1 PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU) YP_002882080.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DSHCT (NUC185) domain YP_002882081.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_002882082.1 PFAM: Glycosyl transferase family 2 YP_002882086.1 PFAM: HIT domain YP_002882087.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002882088.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002882089.1 PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026 YP_002882090.1 PFAM: Domain of unknown function (DUF1905) YP_002882091.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_002882094.1 PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family YP_002882095.1 PFAM: phosphotransferase enzyme family YP_002882097.1 PFAM: Beta-lactamase YP_002882098.1 PFAM: HxlR-like helix-turn-helix YP_002882100.1 PFAM: Protein of unknown function (DUF664) YP_002882102.1 PFAM: Methyltransferase domain YP_002882103.1 PFAM: RibD C-terminal domain YP_002882104.1 PFAM: YCII-related protein domain YP_002882105.1 PFAM: YCII-related protein domain YP_002882106.1 PFAM: Sigma-70 region 2; Tetratricopeptide repeat; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002882109.1 PFAM: Domain of unknown function (DUF323) YP_002882110.1 PFAM: Sulfatase YP_002882111.1 PFAM: Protein of unknown function (DUF1697) YP_002882112.1 PFAM: pfkB family carbohydrate kinase YP_002882113.1 PFAM: Metallo-beta-lactamase superfamily YP_002882115.1 PFAM: Uncharacterised ACR, COG1259 YP_002882116.1 PFAM: MerR family regulatory protein YP_002882117.1 PFAM: FHA domain YP_002882118.1 PFAM: Bacterial protein of unknown function (DUF881) YP_002882119.1 PFAM: Protein of unknown function (DUF1290) YP_002882120.1 PFAM: Bacterial protein of unknown function (DUF881) YP_002882122.1 PFAM: Luciferase-like monooxygenase YP_002882126.1 PFAM: UTP--glucose-1-phosphate uridylyltransferase YP_002882127.1 PFAM: RNase H YP_002882128.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_002882130.1 PFAM: peptidoglycan binding domain; SCP-like extracellular protein YP_002882131.1 PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain YP_002882132.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_002882134.1 PFAM: CAAX amino terminal protease family YP_002882135.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_002882136.1 PFAM: PhoD-like phosphatase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002882139.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_002882140.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882141.1 PFAM: Aldo/keto reductase family YP_002882142.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH) YP_002882143.1 PFAM: Methyltransferase domain YP_002882144.1 PFAM: Carboxylesterase YP_002882146.1 PFAM: Acetyltransferase (GNAT) family YP_002882147.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DJ-1/PfpI family YP_002882148.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_002882150.1 PFAM: alpha/beta hydrolase fold YP_002882151.1 PFAM: RF-1 domain YP_002882152.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_002882154.1 PFAM: C-5 cytosine-specific DNA methylase YP_002882155.1 PFAM: Phage integrase family YP_002882156.1 PFAM: Protein of unknown function (DUF998) YP_002882157.1 PFAM: short chain dehydrogenase YP_002882158.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_002882162.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein Era; GTP-binding conserved hypothetical protein; small GTP-binding protein domain YP_002882163.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_002882164.1 PFAM: Cytidylate kinase; Shikimate kinase; TIGRFAM: cytidylate kinase YP_002882165.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_002882167.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase family YP_002882168.1 PFAM: transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_002882169.1 PFAM: ScpA/B protein YP_002882170.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_002882171.1 PFAM: Integral membrane protein TerC family YP_002882173.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_002882174.1 PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase YP_002882175.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_002882176.1 PFAM: Transaldolase; TIGRFAM: transaldolase, mycobacterial type YP_002882177.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_002882178.1 PFAM: Glucose-6-phosphate dehydrogenase subunit; TIGRFAM: opcA protein YP_002882179.1 TIGRFAM: 6-phosphogluconolactonase YP_002882180.1 PFAM: O-methyltransferase YP_002882182.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_002882183.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_002882184.1 PFAM: phosphoglycerate kinase YP_002882185.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_002882186.1 PFAM: Sporulation Regulator WhiA C terminal domain; Sporulation Regulator WhiA N terminal; TIGRFAM: conserved hypothetical protein YP_002882187.1 PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related protein YP_002882188.1 PFAM: P-loop ATPase protein family YP_002882189.1 PFAM: UvrB/uvrC motif; GIY-YIG catalytic domain; Helix-hairpin-helix motif; UvrC Helix-hairpin-helix N-terminal; TIGRFAM: excinuclease ABC, C subunit YP_002882190.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_002882191.1 PFAM: OsmC-like protein YP_002882192.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate YP_002882193.1 PFAM: MOSC domain YP_002882194.1 PFAM: YCII-related protein domain YP_002882196.1 PFAM: Integral membrane protein TerC family YP_002882197.1 PFAM: Integral membrane protein TerC family YP_002882198.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_002882199.1 PFAM: OsmC-like protein YP_002882201.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; in Mycobacterium tuberculosis the C-terminal UPF0157 domain appears to be necessary for proper folding of the N-terminal domain YP_002882202.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002882203.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002882205.1 PFAM: Pyroglutamyl peptidase; TIGRFAM: pyroglutamyl-peptidase I YP_002882206.1 PFAM: NUDIX domain YP_002882207.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_002882208.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_002882209.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882210.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882211.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002882212.1 PFAM: Methyltransferase domain YP_002882213.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_002882214.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I YP_002882215.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_002882216.1 PFAM: Branched-chain amino acid transport system / permease component YP_002882217.1 PFAM: Branched-chain amino acid transport system / permease component YP_002882218.1 PFAM: ABC transporter YP_002882219.1 PFAM: ABC transporter YP_002882220.1 PFAM: Receptor family ligand binding region YP_002882221.1 PFAM: Response regulator receiver domain; ANTAR domain YP_002882222.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002882223.1 PFAM: YCII-related protein domain YP_002882224.1 PFAM: Protein kinase domain YP_002882228.1 PFAM: Pyruvate kinase, alpha/beta domain; Pyruvate kinase, barrel domain; TIGRFAM: pyruvate kinase YP_002882229.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit YP_002882230.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_002882231.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_002882232.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_002882233.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002882234.1 PFAM: Indole-3-glycerol phosphate synthase YP_002882239.1 PFAM: Tryptophan-associated transmembrane protein (Trp_oprn_chp); TIGRFAM: trp region conserved hypothetical membrane protein YP_002882240.1 PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_002882241.1 PFAM: phosphoribosyl-AMP cyclohydrolase YP_002882242.1 TIGRFAM: conserved hypothetical protein TIGR03085; uncharacterized Actinobacterial protein TIGR03083 YP_002882243.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_002882244.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_002882245.1 PFAM: OsmC-like protein YP_002882246.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_002882247.1 PFAM: Helix-turn-helix YP_002882248.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_002882249.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_002882250.1 PFAM: Proteasome A-type and B-type; proteasome component; Actinomycetales protein of unknown function, DUF275 YP_002882251.1 PFAM: Proteasome A-type and B-type YP_002882252.1 PFAM: Protein of unknown function (DUF797) YP_002882253.1 PFAM: Actinomycetales protein of unknown function, DUF275; proteasome component YP_002882255.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_002882256.1 PFAM: tRNA methyltransferase complex GCD14 subunit YP_002882257.1 PFAM: Peptidase family M50 YP_002882258.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_002882259.1 PFAM: Protein of unknown function DUF75 YP_002882260.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002882261.1 PFAM: CorA-like Mg2+ transporter protein YP_002882262.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); undecaprenyl-diphosphatase UppP YP_002882263.1 PFAM: Aldo/keto reductase family YP_002882266.1 PFAM: Peptidase family M20/M25/M40 YP_002882267.1 PFAM: Peptidase family M3 YP_002882268.1 PFAM: Protein of unknown function (DUF1503); TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_002882269.1 PFAM: YCII-related protein domain YP_002882270.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavin containing amine oxidoreductase YP_002882271.1 PFAM: Major Facilitator Superfamily YP_002882272.1 PFAM: Major Facilitator Superfamily YP_002882273.1 PFAM: Cellulase (glycosyl hydrolase family 5) YP_002882274.1 PFAM: Acetyltransferase (GNAT) family YP_002882275.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002882276.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002882277.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882278.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882279.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_002882280.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002882281.1 PFAM: Peptidase family M23 YP_002882284.1 PFAM: Domain of unknown function (DUF377) YP_002882285.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882286.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882287.1 PFAM: Bacterial extracellular solute-binding protein YP_002882288.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002882289.1 PFAM: Dienelactone hydrolase family YP_002882290.1 PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal; Acyl-CoA thioester hydrolase / Bile acid-CoA amino acid N-acetyltransferase YP_002882291.1 PFAM: Acetyltransferase (GNAT) family YP_002882294.1 PFAM: RecF/RecN/SMC N terminal domain YP_002882295.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, , group 2 YP_002882296.1 TIGRFAM: conserved hypothetical protein YP_002882297.1 PFAM: haloacid dehalogenase-like hydrolase YP_002882298.1 PFAM: phosphotransferase enzyme family YP_002882299.1 PFAM: Domain of unknown function DUF20 YP_002882300.1 PFAM: PHP domain; OB-fold nucleic acid binding domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_002882303.1 PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481 YP_002882304.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain YP_002882305.1 PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain YP_002882306.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome YP_002882307.1 PFAM: Periplasmic binding protein YP_002882308.1 PFAM: ABC transporter YP_002882309.1 PFAM: CDP-alcohol phosphatidyltransferase YP_002882311.1 PFAM: Flavin reductase like domain YP_002882312.1 PFAM: Endoribonuclease L-PSP YP_002882313.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882314.1 PFAM: ABC transporter; NIL domain YP_002882315.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_002882317.1 PFAM: FAD binding domain YP_002882319.1 PFAM: MarR family YP_002882320.1 PFAM: Acetyltransferase (GNAT) family YP_002882321.1 PFAM: SpoU rRNA Methylase family YP_002882322.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882324.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002882325.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_002882326.1 PFAM: SPFH domain / Band 7 family YP_002882327.1 PFAM: NfeD-like YP_002882328.1 PFAM: ABC transporter YP_002882330.1 PFAM: Glycosyl transferases group 1; TIGRFAM: glycogen synthase, Corynebacterium family YP_002882331.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_002882332.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphoserine phosphatase SerB; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_002882333.1 PFAM: phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA YP_002882334.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_002882335.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_002882339.1 PFAM: ABC transporter YP_002882340.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882341.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002882342.1 PFAM: SpoU rRNA Methylase family YP_002882343.1 PFAM: BioY family YP_002882344.1 PFAM: neutral zinc metallopeptidase YP_002882345.1 PFAM: HNH endonuclease YP_002882347.1 PFAM: Domain of unknown function DUF59 YP_002882348.1 PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family YP_002882349.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily YP_002882350.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_002882351.1 PFAM: Rieske [2Fe-2S] domain YP_002882352.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1 YP_002882353.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB YP_002882355.1 PFAM: ABC transporter YP_002882356.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002882357.1 PFAM: NmrA-like family YP_002882358.1 PFAM: Predicted integral membrane protein (DUF2266) YP_002882359.1 PFAM: Cytochrome oxidase assembly protein YP_002882360.1 PFAM: NUDIX domain YP_002882361.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002882362.1 PFAM: Glycosyl transferases group 1 YP_002882363.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_002882366.1 PFAM: Thiamin pyrophosphokinase, catalytic domain YP_002882367.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_002882368.1 PFAM: ATP-NAD kinase YP_002882369.1 PFAM: FtsJ-like methyltransferase; S4 domain; TIGRFAM: hemolysin TlyA family protein YP_002882371.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA YP_002882374.1 PFAM: tRNA synthetases class I (W and Y); S4 domain; TIGRFAM: tyrosyl-tRNA synthetase YP_002882375.1 PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg) YP_002882376.1 PFAM: Methyltransferase domain YP_002882378.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_002882379.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002882380.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor YP_002882381.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_002882382.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases YP_002882383.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_002882384.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_002882385.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_002882386.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_002882388.1 PFAM: short chain dehydrogenase YP_002882389.1 PFAM: tRNA binding domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_002882390.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_002882391.1 PFAM: Ribbon-helix-helix protein, copG family YP_002882393.1 PFAM: SNARE associated Golgi protein YP_002882394.1 PFAM: RNA 2'-O ribose methyltransferase substrate binding; SpoU rRNA Methylase family YP_002882395.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_002882396.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_002882397.1 PFAM: Translation initiation factor IF-3, N-terminal domain; Translation initiation factor IF-3, C-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_002882401.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis YP_002882402.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_002882404.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_002882405.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_002882406.1 PFAM: phosphoribosyl transferase domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family YP_002882407.1 PFAM: PspC domain YP_002882408.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_002882410.1 PFAM: NUDIX domain YP_002882411.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase YP_002882412.1 PFAM: Acetyltransferase (GNAT) family YP_002882413.1 PFAM: S4 domain; RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_002882414.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_002882415.1 PFAM: DivIVA protein YP_002882416.1 PFAM: YGGT family YP_002882417.1 PFAM: Protein of unknown function (DUF552) YP_002882418.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726 YP_002882419.1 PFAM: Tubulin/FtsZ family, C-terminal domain; Tubulin/FtsZ family, GTPase domain; TIGRFAM: cell division protein FtsZ YP_002882420.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_002882421.1 PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_002882422.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_002882423.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_002882424.1 PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002882425.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002882426.1 PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_002882427.1 PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases YP_002882428.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_002882430.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_002882431.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_002882432.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_002882433.1 PFAM: Protein of unknown function DUF58 YP_002882434.1 PFAM: Transglutaminase-like superfamily YP_002882436.1 PFAM: impB/mucB/samB family YP_002882438.1 PFAM: 'Cold-shock' DNA-binding domain YP_002882439.1 PFAM: Protein of unknown function DUF75 YP_002882440.1 PFAM: UvrD/REP helicase YP_002882441.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002882443.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_002882444.1 PFAM: LysM domain YP_002882445.1 PFAM: Peptidase S24-like; LexA DNA binding domain; TIGRFAM: SOS regulatory protein LexA YP_002882446.1 PFAM: lactate/malate dehydrogenase, NAD binding domain; lactate/malate dehydrogenase, alpha/beta C-terminal domain; TIGRFAM: L-lactate dehydrogenase YP_002882447.1 TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002882448.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein domain; GTP-binding conserved hypothetical protein YP_002882449.1 PFAM: Methyltransferase small domain YP_002882450.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_002882451.1 PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA) YP_002882454.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB YP_002882455.1 PFAM: ABC transporter YP_002882456.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_002882457.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_002882458.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_002882459.1 PFAM: RecX family YP_002882460.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_002882461.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002882462.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002882465.1 PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; DEAD/H associated YP_002882466.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain YP_002882467.1 PFAM: Helix-turn-helix YP_002882468.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_002882469.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002882470.1 PFAM: Bacterial capsule synthesis protein PGA_cap YP_002882471.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002882472.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002882473.1 PFAM: FtsK/SpoIIIE family; Ftsk gamma domain YP_002882476.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882477.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_002882478.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_002882479.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_002882480.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_002882481.1 PFAM: Acetyltransferase (GNAT) family YP_002882482.1 PFAM: Uncharacterized protein family, UPF0114; TIGRFAM: conserved hypothetical transmembrane protein YP_002882484.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002882485.1 PFAM: Diacylglycerol kinase catalytic domain YP_002882486.1 PFAM: short chain dehydrogenase YP_002882487.1 PFAM: Major Facilitator Superfamily YP_002882488.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_002882489.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_002882490.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; KH domain; S1 RNA binding domain; TIGRFAM: guanosine pentaphosphate synthetase I/polynucleotide phosphorylase YP_002882491.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_002882492.1 PFAM: Bacterial regulatory proteins, tetR family; Tetracyclin repressor, C-terminal all-alpha domain YP_002882493.1 PFAM: alpha/beta hydrolase fold YP_002882494.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002882495.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002882496.1 PFAM: Predicted permease YP_002882497.1 PFAM: ABC transporter YP_002882498.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_002882499.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); tRNA Pseudouridine synthase II, C terminal; TIGRFAM: tRNA pseudouridine 55 synthase YP_002882500.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_002882501.1 PFAM: Elongation factor Tu GTP binding domain; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu domain 2; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_002882502.1 PFAM: Protein of unknown function (DUF448) YP_002882503.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA YP_002882504.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_002882506.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_002882507.1 PFAM: Endoribonuclease L-PSP YP_002882508.1 PFAM: HTH domain YP_002882509.1 PFAM: Acetyltransferase (GNAT) family YP_002882510.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_002882511.1 PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP YP_002882512.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002882514.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_002882515.1 PFAM: Cytidylyltransferase family YP_002882516.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002882517.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_002882518.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002882519.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_002882520.1 PFAM: Peptidase family M23 YP_002882521.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_002882522.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002882523.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_002882529.1 PFAM: Resolvase, N terminal domain; Recombinase YP_002882531.1 PFAM: Bifunctional DNA primase/polymerase, N-terminal YP_002882537.1 TIGRFAM: phage terminase, small subunit, , P27 family YP_002882541.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252 YP_002882542.1 PFAM: Protein of unknown function (DUF2469) YP_002882543.1 PFAM: Ribonuclease HII YP_002882544.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_002882545.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_002882546.1 PFAM: Acetyltransferase (GNAT) family; tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_002882547.1 PFAM: RimM N-terminal domain; PRC-barrel domain; TIGRFAM: 16S rRNA processing protein RimM YP_002882549.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_002882552.1 PFAM: Signal peptide binding domain; SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle protein YP_002882553.1 PFAM: HD domain; GlnD PII-uridylyltransferase; nucleotidyltransferase DUF294; TIGRFAM: [Protein-PII] uridylyltransferase YP_002882554.1 PFAM: Nitrogen regulatory protein P-II YP_002882555.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_002882556.1 PFAM: SRP54-type protein, helical bundle domain; SRP54-type protein, GTPase domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_002882558.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type YP_002882559.1 PFAM: Bacterial extracellular solute-binding protein YP_002882560.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882561.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882562.1 PFAM: TOBE domain; ABC transporter YP_002882563.1 PFAM: PHP domain YP_002882564.1 PFAM: Beta-lactamase YP_002882566.1 PFAM: Nucleoside diphosphate kinase YP_002882568.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002882569.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882570.1 PFAM: PTS HPr component phosphorylation site; PTS system fructose IIA component; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; phosphotransferase System HPr (HPr) Family YP_002882571.1 PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit YP_002882572.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882573.1 PFAM: alpha/beta hydrolase fold YP_002882574.1 PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_002882575.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin) YP_002882576.1 PFAM: HIT domain YP_002882577.1 PFAM: HNH endonuclease YP_002882578.1 PFAM: short chain dehydrogenase YP_002882579.1 PFAM: Aminotransferase class-III YP_002882580.1 PFAM: NMT1/THI5 like YP_002882581.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882582.1 PFAM: ABC transporter YP_002882583.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882584.1 PFAM: Luciferase-like monooxygenase YP_002882585.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position YP_002882586.1 PFAM: Carbon-nitrogen hydrolase YP_002882587.1 PFAM: Amino acid permease YP_002882588.1 PFAM: Aldo/keto reductase family YP_002882589.1 PFAM: Periplasmic binding protein YP_002882590.1 PFAM: FecCD transport family YP_002882591.1 PFAM: ABC transporter YP_002882593.1 PFAM: F420-0:Gamma-glutamyl ligase; TIGRFAM: F420-dependent oxidoreductase YP_002882594.1 PFAM: Luciferase-like monooxygenase YP_002882595.1 PFAM: Family 4 glycosyl hydrolase YP_002882596.1 PFAM: pfkB family carbohydrate kinase YP_002882597.1 PFAM: Bacterial extracellular solute-binding protein YP_002882598.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882599.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882600.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_002882601.1 PFAM: AMP-binding enzyme YP_002882602.1 PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, alpha proteobacterial type YP_002882603.1 PFAM: ClpX C4-type zinc finger; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_002882604.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_002882605.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_002882606.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_002882607.1 PFAM: Sulfatase YP_002882608.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882609.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882610.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002882611.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002882612.1 PFAM: Cupin domain YP_002882614.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002882615.1 PFAM: phosphotransferase enzyme family YP_002882616.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase A YP_002882617.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_002882618.1 PFAM: AbgT transporter family; TIGRFAM: p-Aminobenzoyl-glutamate transporter family YP_002882619.1 PFAM: Cytosol aminopeptidase family, N-terminal domain; Cytosol aminopeptidase family, catalytic domain YP_002882620.1 PFAM: Domain of unknown function DUF20 YP_002882621.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain YP_002882625.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002882627.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_002882628.1 PFAM: Peptidase family M13; Peptidase family M13 YP_002882631.1 PFAM: Acetyltransferase (GNAT) family YP_002882633.1 PFAM: Bacterial extracellular solute-binding protein YP_002882634.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882635.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882637.1 PFAM: Peptidase family M1; TIGRFAM: aminopeptidase N, Streptomyces lividans type YP_002882638.1 PFAM: Acetyltransferase (GNAT) family YP_002882639.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component YP_002882640.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_002882641.1 PFAM: Mechanosensitive ion channel YP_002882642.1 PFAM: phosphotransferase system, EIIB YP_002882643.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_002882644.1 PFAM: Bacterial-like globin YP_002882645.1 PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II YP_002882646.1 PFAM: Thioesterase superfamily YP_002882647.1 PFAM: GTPase of unknown function YP_002882649.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_002882650.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_002882653.1 PFAM: Methyltransferase domain YP_002882654.1 PFAM: Domain of unknown function (DUF1905) YP_002882655.1 PFAM: phosphotransferase enzyme family YP_002882656.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_002882657.1 PFAM: Domain of Unknown Function (DUF1206) YP_002882658.1 PFAM: Fe-S metabolism associated domain YP_002882659.1 PFAM: Rhodanese-like domain YP_002882660.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002882662.1 PFAM: Exonuclease YP_002882664.1 PFAM: Predicted lipoprotein of unknown function (DUF2380) YP_002882668.1 PFAM: Acetyltransferase (GNAT) family YP_002882669.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; Bacterial regulatory protein, arsR family YP_002882670.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_002882671.1 PFAM: FAD dependent oxidoreductase YP_002882672.1 PFAM: Bacterial regulatory protein, arsR family YP_002882673.1 PFAM: Fatty acid desaturase YP_002882675.1 PFAM: ABC transporter YP_002882676.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882677.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882678.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_002882679.1 PFAM: AhpC/TSA family YP_002882680.1 PFAM: Endoribonuclease L-PSP YP_002882681.1 PFAM: Helix-turn-helix domain, rpiR family; SIS domain YP_002882682.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE YP_002882683.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE YP_002882684.1 PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein YP_002882685.1 TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein YP_002882686.1 PFAM: haloacid dehalogenase-like hydrolase YP_002882688.1 PFAM: Integral membrane protein DUF125 YP_002882689.1 PFAM: Protein of unknown function DUF72 YP_002882690.1 PFAM: NmrA-like family YP_002882691.1 PFAM: NmrA-like family YP_002882692.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues YP_002882693.1 PFAM: alpha/beta hydrolase fold YP_002882694.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882695.1 PFAM: FAD binding domain YP_002882696.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_002882697.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_002882699.1 PFAM: ABC transporter YP_002882702.1 PFAM: Glycosyltransferase family 28 C-terminal domain; alpha/beta hydrolase fold YP_002882703.1 PFAM: Methyltransferase domain YP_002882704.1 PFAM: Bacterial regulatory proteins, luxR family YP_002882706.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002882707.1 PFAM: short chain dehydrogenase YP_002882708.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882709.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882710.1 PFAM: Bacterial extracellular solute-binding protein YP_002882712.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_002882713.1 PFAM: GlcNAc-PI de-N-acetylase YP_002882714.1 PFAM: Methyltransferase domain YP_002882715.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_002882716.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_002882717.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_002882718.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002882720.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002882721.1 PFAM: Amino acid permease YP_002882722.1 PFAM: Major Facilitator Superfamily YP_002882723.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C terminal domain YP_002882724.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882725.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882726.1 PFAM: Bacterial extracellular solute-binding protein YP_002882727.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002882728.1 PFAM: phosphotransferase enzyme family YP_002882729.1 PFAM: Glucose inhibited division protein A YP_002882730.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002882731.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter YP_002882732.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_002882733.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882734.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882735.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002882738.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002882739.1 PFAM: ABC transporter YP_002882740.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_002882741.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_002882742.1 PFAM: phosphoenolpyruvate carboxylase YP_002882743.1 PFAM: Metallo-beta-lactamase superfamily YP_002882744.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_002882745.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_002882746.1 PFAM: PIN domain YP_002882747.1 PFAM: Domain of unknown function (DUF2017) YP_002882748.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_002882749.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase YP_002882750.1 PFAM: Type III restriction enzyme, res subunit YP_002882752.1 PFAM: Carboxylesterase YP_002882753.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002882756.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate YP_002882758.1 PFAM: ABC transporter YP_002882759.1 PFAM: Bacterial DNA-binding protein YP_002882760.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain YP_002882765.1 PFAM: SNF2 family N-terminal domain; Helicase conserved C-terminal domain YP_002882766.1 PFAM: SnoaL-like polyketide cyclase YP_002882768.1 PFAM: Acetyltransferase (GNAT) family YP_002882769.1 PFAM: Luciferase-like monooxygenase YP_002882770.1 PFAM: Sulfatase YP_002882772.1 PFAM: Predicted membrane protein (DUF2207) YP_002882773.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_002882774.1 PFAM: Peptidase family M23 YP_002882775.1 PFAM: Predicted permease YP_002882776.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein YP_002882777.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002882778.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2 YP_002882779.1 PFAM: phosphotransferase enzyme family YP_002882780.1 PFAM: Aminotransferase class-V YP_002882781.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_002882782.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; TIGRFAM: L-aspartate oxidase YP_002882783.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_002882784.1 PFAM: NUDIX domain YP_002882785.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882786.1 PFAM: FAD dependent oxidoreductase YP_002882787.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein YP_002882789.1 PFAM: Bacterial Ig-like domain (group 1) YP_002882790.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm YP_002882791.1 PFAM: NAD(P) transhydrogenase beta subunit YP_002882794.1 PFAM: TadE-like protein YP_002882796.1 PFAM: Bacterial type II secretion system protein F domain YP_002882797.1 PFAM: Bacterial type II secretion system protein F domain YP_002882798.1 PFAM: Type II/IV secretion system protein YP_002882799.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002882801.1 PFAM: Protein of unknown function (DUF664) YP_002882802.1 PFAM: CbiX YP_002882803.1 PFAM: Transcriptional regulatory protein, C terminal; Uroporphyrinogen-III synthase HemD YP_002882804.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: siroheme synthase, N-terminal domain; uroporphyrin-III C-methyltransferase YP_002882805.1 PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_002882806.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; Nitrite and sulphite reductase 4Fe-4S domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit YP_002882807.1 PFAM: BFD-like [2Fe-2S] binding domain; Pyridine nucleotide-disulphide oxidoreductase YP_002882808.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_002882809.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator) YP_002882810.1 PFAM: Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase; TIGRFAM: respiratory nitrate reductase, alpha subunit YP_002882811.1 TIGRFAM: nitrate reductase, beta subunit YP_002882812.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone YP_002882813.1 PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit YP_002882814.1 PFAM: Major Facilitator Superfamily YP_002882819.1 PFAM: Acetyltransferase (GNAT) family YP_002882820.1 PFAM: Aminotransferase class I and II YP_002882821.1 PFAM: Domain of unknown function (DU1801) YP_002882822.1 PFAM: ROK family YP_002882823.1 PFAM: Melibiase YP_002882824.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882825.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882826.1 PFAM: Bacterial extracellular solute-binding protein YP_002882827.1 PFAM: Uncharacterised ACR, COG2135 YP_002882828.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002882829.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_002882831.1 PFAM: ABC transporter YP_002882832.1 PFAM: Predicted permease YP_002882833.1 PFAM: FHA domain; FtsK/SpoIIIE family YP_002882835.1 PFAM: Transcription factor WhiB YP_002882836.1 PFAM: PAS fold; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_002882837.1 PFAM: Protein of unknown function (DUF2505) YP_002882838.1 PFAM: Sodium:dicarboxylate symporter family YP_002882839.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882840.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882841.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002882842.1 PFAM: IclR helix-turn-helix domain YP_002882843.1 PFAM: Glucose inhibited division protein A YP_002882844.1 PFAM: Bacterial extracellular solute-binding protein YP_002882845.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882846.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882847.1 PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase YP_002882848.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002882849.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002882850.1 PFAM: Calcineurin-like phosphoesterase YP_002882851.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002882852.1 PFAM: ABC transporter; TOBE domain YP_002882853.1 PFAM: Bacterial extracellular solute-binding protein YP_002882854.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882855.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882856.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA YP_002882857.1 PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family YP_002882858.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; PAS fold; TIGRFAM: PAS domain S-box YP_002882859.1 PFAM: Acetyltransferase (GNAT) family YP_002882860.1 PFAM: Bacterial regulatory proteins, tetR family YP_002882861.1 PFAM: NAD dependent epimerase/dehydratase family YP_002882862.1 PFAM: OsmC-like protein YP_002882864.1 PFAM: Aldo/keto reductase family YP_002882865.1 PFAM: Bacterial regulatory protein, arsR family YP_002882866.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002882867.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002882868.1 PFAM: Luciferase-like monooxygenase YP_002882869.1 PFAM: Luciferase-like monooxygenase YP_002882870.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_002882871.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_002882872.1 PFAM: Dihydrofolate reductase YP_002882874.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002882877.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_002882878.1 PFAM: Protein of unknown function DUF58 YP_002882880.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_002882881.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882882.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882883.1 PFAM: Bacterial extracellular solute-binding protein YP_002882884.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002882885.1 PFAM: Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_002882886.1 PFAM: FAD binding domain; D-arabinono-1,4-lactone oxidase YP_002882887.1 PFAM: DNA alkylation repair enzyme YP_002882888.1 PFAM: Bacterial regulatory protein, arsR family YP_002882889.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002882890.1 PFAM: RibD C-terminal domain YP_002882892.1 PFAM: Uncharacterised protein family (UPF0182) YP_002882895.1 PFAM: HTH domain YP_002882897.1 PFAM: Uncharacterised conserved protein (DUF2342) YP_002882898.1 PFAM: Protein of unknown function DUF45 YP_002882902.1 PFAM: ABC transporter YP_002882903.1 PFAM: PhoD-like phosphatase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002882904.1 PFAM: HRDC domain; UvrD/REP helicase YP_002882905.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein YP_002882906.1 PFAM: NADH pyrophosphatase-like rudimentary NUDIX domain; NADH pyrophosphatase zinc ribbon domain; NUDIX domain YP_002882907.1 PFAM: phosphotransferase enzyme family YP_002882908.1 PFAM: UvrD/REP helicase YP_002882909.1 PFAM: UvrD/REP helicase YP_002882913.1 PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain YP_002882914.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_002882915.1 PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427 YP_002882916.1 PFAM: PHP domain YP_002882917.1 PFAM: metallopeptidase family M24; Aminopeptidase P, N-terminal domain YP_002882918.1 PFAM: Predicted membrane protein (DUF2079) YP_002882920.1 PFAM: MgtE intracellular N domain; CBS domain pair YP_002882921.1 PFAM: Protein of unknown function (DUF1003) YP_002882922.1 PFAM: Protein of unknown function (DUF1503); TIGRFAM: uncharacterized Actinobacterial protein TIGR03083 YP_002882923.1 PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59 YP_002882925.1 TIGRFAM: twin arginine-targeting protein translocase TatB YP_002882926.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_002882928.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002882929.1 PFAM: O-methyltransferase YP_002882930.1 PFAM: phosphotransferase enzyme family YP_002882931.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain YP_002882935.1 PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related protein, family 2; conserved hypothetical protein, DprA/Smf-related protein, family 1 YP_002882936.1 catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate YP_002882938.1 PFAM: ABC transporter YP_002882939.1 catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity YP_002882940.1 PFAM: phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleotide phosphorylase YP_002882941.1 PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YP_002882942.1 PFAM: MarR family YP_002882943.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase YP_002882946.1 PFAM: Domain of unknown function DUF YP_002882947.1 PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase YP_002882949.1 PFAM: Protein of unknown function (DUF1205); Glycosyltransferase family 28 N-terminal domain; TIGRFAM: glycosyltransferase, MGT family YP_002882950.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_002882951.1 PFAM: Branched-chain amino acid transport system / permease component YP_002882952.1 PFAM: Branched-chain amino acid transport system / permease component YP_002882953.1 PFAM: ABC transporter YP_002882954.1 PFAM: Basic membrane protein YP_002882955.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase YP_002882956.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002882957.1 PFAM: Succinate dehydrogenase cytochrome b subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_002882958.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_002882959.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002882960.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_002882961.1 PFAM: phosphotransferase enzyme family YP_002882962.1 PFAM: Ribonuclease BN-like family YP_002882963.1 PFAM: 2',5' RNA ligase family YP_002882964.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_002882965.1 PFAM: DeoR-like helix-turn-helix domain; Bacterial regulatory proteins, deoR family YP_002882966.1 PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1 YP_002882967.1 PFAM: GHMP kinases N terminal domain; GHMP kinases C terminal; Galactokinase galactose-binding signature; TIGRFAM: galactokinase YP_002882969.1 PFAM: peptidoglycan binding domain YP_002882970.1 PFAM: ABC transporter YP_002882971.1 PFAM: Predicted permease YP_002882973.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002882974.1 PFAM: Bacterial regulatory protein, arsR family YP_002882975.1 PFAM: Major Facilitator Superfamily YP_002882976.1 TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083 YP_002882977.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002882978.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_002882980.1 PFAM: Domain of unknown function (DUF2394) YP_002882981.1 PFAM: short chain dehydrogenase YP_002882982.1 PFAM: Dihydrodipicolinate synthetase family YP_002882984.1 PFAM: Bacterial extracellular solute-binding protein YP_002882985.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882986.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002882987.1 PFAM: Amidohydrolase family; D-aminoacylase, C-terminal region; Amidohydrolase family YP_002882988.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_002882989.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP YP_002882991.1 PFAM: short chain dehydrogenase YP_002882992.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_002882994.1 PFAM: Protein of unknown function (DUF1330) YP_002882995.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_002882996.1 PFAM: Serine hydroxymethyltransferase YP_002882998.1 PFAM: Beta-lactamase YP_002882999.1 PFAM: Acetyltransferase (GNAT) family YP_002883000.1 PFAM: Formyl transferase; ACT domain; TIGRFAM: formyltetrahydrofolate deformylase YP_002883001.1 PFAM: ABC transporter YP_002883002.1 PFAM: ROK family; MarR family YP_002883003.1 PFAM: Branched-chain amino acid transport system / permease component YP_002883004.1 PFAM: ABC transporter YP_002883006.1 PFAM: Alpha mannosidase, middle domain; Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain YP_002883007.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002883008.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883009.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883010.1 PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase YP_002883011.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883012.1 PFAM: FAD dependent oxidoreductase YP_002883013.1 catalyzes the oxidation of malate to oxaloacetate YP_002883014.1 Converts isocitrate to alpha ketoglutarate YP_002883015.1 PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_002883017.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_002883018.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002883019.1 PFAM: alpha/beta hydrolase fold YP_002883020.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_002883023.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_002883024.1 catalyzes the interconversion of succinyl-CoA and succinate YP_002883027.1 PFAM: Clp amino terminal domain YP_002883029.1 PFAM: Acyltransferase family YP_002883030.1 PFAM: alpha/beta hydrolase fold YP_002883031.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002883032.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA YP_002883033.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002883034.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002883035.1 PFAM: ABC transporter YP_002883038.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_002883039.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002883040.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PspC domain YP_002883041.1 PFAM: PspC domain YP_002883043.1 PFAM: Glycosyl transferases group 1 YP_002883044.1 PFAM: NAD synthase; GMP synthase C terminal domain; Glutamine amidotransferase class-I; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_002883047.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002883048.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002883049.1 PFAM: Glycosyl hydrolase family 20, catalytic domain YP_002883051.1 PFAM: Transcriptional regulator PadR-like family YP_002883053.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP N-terminal domain; XFP C-terminal domain YP_002883054.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate YP_002883055.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_002883057.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_002883058.1 PFAM: Acetyltransferase (GNAT) family YP_002883059.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_002883060.1 PFAM: Exonuclease YP_002883061.1 PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_002883062.1 PFAM: MerR family regulatory protein YP_002883063.1 PFAM: Transcription factor WhiB YP_002883064.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_002883067.1 PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme YP_002883068.1 PFAM: HTH domain YP_002883069.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002883070.1 PFAM: Acetyltransferase (GNAT) family YP_002883071.1 PFAM: Transcriptional regulator PadR-like family YP_002883073.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter YP_002883074.1 PFAM: Glycoprotease family; TIGRFAM: metalloendopeptidase, , glycoprotease family YP_002883075.1 PFAM: Rhodanese-like domain YP_002883076.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_002883077.1 PFAM: Glycoprotease family YP_002883078.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein YP_002883079.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_002883080.1 PFAM: YjeF-related protein protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related protein YP_002883081.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002883082.1 PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain; Beta-galactosidase YP_002883083.1 PFAM: Bacterial extracellular solute-binding protein YP_002883084.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883085.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883086.1 PFAM: Uncharacterised Sugar-binding Domain; Carbohydrate binding domain; Glycosyl hydrolase family 53; Bacterial Ig-like domain (group 4) YP_002883088.1 PFAM: HNH endonuclease YP_002883089.1 PFAM: HIT domain YP_002883090.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_002883091.1 PFAM: phosphotransferase enzyme family YP_002883092.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_002883093.1 PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002883094.1 PFAM: phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase YP_002883095.1 PFAM: NAD dependent epimerase/dehydratase family YP_002883096.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2064); Glycosyl transferase family 2 YP_002883097.1 PFAM: Methyltransferase domain YP_002883099.1 PFAM: Oxidoreductase molybdopterin binding domain YP_002883100.1 PFAM: Luciferase-like monooxygenase YP_002883102.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_002883103.1 PFAM: Transcriptional regulatory protein, C terminal; Bacterial transcriptional activator domain; NB-ARC domain YP_002883104.1 PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal YP_002883105.1 PFAM: Transcriptional regulatory protein, C terminal; NB-ARC domain; Bacterial transcriptional activator domain YP_002883106.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_002883107.1 PFAM: Transcriptional regulatory protein, C terminal; NB-ARC domain; Bacterial transcriptional activator domain YP_002883109.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_002883110.1 PFAM: phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase, C-terminal domain; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; TIGRFAM: phosphoglucosamine mutase YP_002883111.1 PFAM: Ribosomal protein S9/S16 YP_002883112.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, archaeal/eukaryotic; ribosomal protein L13, bacterial type YP_002883114.1 PFAM: short chain dehydrogenase YP_002883115.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_002883116.1 PFAM: ROK family YP_002883118.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002883119.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002883120.1 PFAM: Ribosomal protein S11 YP_002883121.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002883122.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_002883123.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_002883124.1 PFAM: Inositol monophosphatase family YP_002883125.1 PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_002883126.1 PFAM: Bacterial regulatory proteins, luxR family YP_002883127.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_002883128.1 PFAM: Adenylate kinase; TIGRFAM: adenylate kinases YP_002883129.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_002883130.1 PFAM: Ribosomal protein L15; Ribosomal protein L15 amino terminal region; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_002883131.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002883132.1 PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_002883133.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_002883134.1 PFAM: Ribosomal protein L6 YP_002883135.1 PFAM: Ribosomal protein S8 YP_002883136.1 PFAM: Ribosomal protein S14p/S29e YP_002883137.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_002883138.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002883139.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_002883140.1 PFAM: Ribosomal protein S17 YP_002883141.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_002883142.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002883143.1 PFAM: Ribosomal protein S3, C-terminal domain; KH domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_002883144.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002883145.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_002883146.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002883147.1 PFAM: Ribosomal protein L23 YP_002883148.1 PFAM: Ribosomal protein L4/L1 family YP_002883149.1 PFAM: Ribosomal protein L3 YP_002883150.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_002883151.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002883152.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_002883153.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_002883154.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_002883155.1 PFAM: Major Facilitator Superfamily YP_002883156.1 PFAM: YdjC-like protein YP_002883157.1 PFAM: Protein of unknown function (DUF990) YP_002883158.1 PFAM: Protein of unknown function (DUF990) YP_002883159.1 PFAM: ABC transporter YP_002883160.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_002883161.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002883162.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002883163.1 PFAM: Ribosomal protein L10 YP_002883166.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_002883167.1 PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, RNA binding domain; TIGRFAM: 50S ribosomal protein L11 YP_002883168.1 PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG YP_002883169.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_002883170.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_002883172.1 PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002883173.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_002883175.1 PFAM: phosphotransferase enzyme family YP_002883176.1 PFAM: Uncharacterised BCR (COG3801) YP_002883177.1 PFAM: ABC transporter YP_002883178.1 PFAM: ABC-2 type transporter YP_002883179.1 catalyzes the formation of inosine from adenosine YP_002883181.1 PFAM: Predicted permease YP_002883182.1 PFAM: ABC transporter YP_002883183.1 PFAM: Transcriptional regulator PadR-like family YP_002883184.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_002883185.1 PFAM: Major Facilitator Superfamily YP_002883186.1 PFAM: Major Facilitator Superfamily YP_002883187.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883188.1 PFAM: MaoC like domain YP_002883189.1 PFAM: MaoC like domain YP_002883190.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_002883191.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain; TIGRFAM: phosphonate catabolism associated alcohol dehydrogenase YP_002883192.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphonatase-like hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_002883193.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_002883194.1 PFAM: Protein of unknown function (DUF520) YP_002883196.1 PFAM: Transcriptional regulator PadR-like family YP_002883199.1 metalloprotease YP_002883201.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_002883207.1 PFAM: Integral membrane protein DUF6; TIGRFAM: rarD protein YP_002883208.1 PFAM: Subtilase family YP_002883209.1 PFAM: Protein of unknown function (DUF690) YP_002883210.1 PFAM: Protein of unknown function (DUF571); TIGRFAM: secretion protein snm4 YP_002883211.1 PFAM: Proteins of 100 residues with WXG YP_002883212.1 PFAM: Proteins of 100 residues with WXG YP_002883215.1 PFAM: Subtilase family YP_002883216.1 PFAM: Proteins of 100 residues with WXG YP_002883217.1 PFAM: Proteins of 100 residues with WXG YP_002883218.1 PFAM: FHA domain; RDD family YP_002883220.1 PFAM: FtsK/SpoIIIE family YP_002883221.1 PFAM: Polyprenyl synthetase YP_002883222.1 Catalyzes the transfer of electrons from NADH to quinone YP_002883223.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_002883224.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_002883225.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_002883226.1 Catalyzes the transfer of electrons from NADH to quinone YP_002883227.1 PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I YP_002883228.1 Catalyzes the transfer of electrons from NADH to quinone YP_002883229.1 Catalyzes the transfer of electrons from NADH to quinone YP_002883230.1 PFAM: SLBB domain; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit YP_002883231.1 Catalyzes the transfer of electrons from NADH to quinone YP_002883232.1 Catalyzes the transfer of electrons from NADH to quinone YP_002883233.1 Catalyzes the transfer of electrons from NADH to quinone YP_002883234.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_002883235.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_002883236.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: geranylgeranyl reductase family YP_002883237.1 PFAM: CsbD-like YP_002883238.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_002883239.1 PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases YP_002883240.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_002883241.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YP_002883242.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate YP_002883243.1 PFAM: CBS domain pair; Transporter associated domain; Domain of unknown function DUF21 YP_002883244.1 PFAM: Catalase; Catalase-related protein immune-responsive YP_002883245.1 PFAM: Ferric uptake regulator family YP_002883246.1 PFAM: CBS domain pair; Divalent cation transporter; MgtE intracellular N domain; TIGRFAM: Mg2+ transporter (mgtE) YP_002883248.1 PFAM: Small Multidrug Resistance protein YP_002883249.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase) YP_002883253.1 PFAM: AMP-binding enzyme YP_002883254.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_002883256.1 PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_002883257.1 PFAM: ResB-like family YP_002883258.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_002883259.1 PFAM: Redoxin YP_002883260.1 PFAM: phosphoglycerate mutase family YP_002883261.1 PFAM: MarR family YP_002883262.1 PFAM: YceI-like domain YP_002883263.1 PFAM: Glutaredoxin-like domain (DUF836) YP_002883264.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_002883265.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Helix-turn-helix; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002883266.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_002883267.1 PFAM: Mitochondrial domain of unknown function (DUF1713) YP_002883268.1 TIGRFAM: DNA binding domain, excisionase family YP_002883269.1 PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106 YP_002883270.1 PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family YP_002883271.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_002883272.1 PFAM: alpha/beta hydrolase fold YP_002883273.1 PFAM: Histone deacetylase domain YP_002883274.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_002883275.1 PFAM: TrkA-N domain YP_002883276.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_002883277.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism YP_002883278.1 catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate YP_002883279.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate YP_002883280.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002883281.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_002883284.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002883285.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_002883287.1 PFAM: Helix-hairpin-helix motif; Iron-sulfur binding domain of endonuclease III; TIGRFAM: A/G-specific adenine glycosylase YP_002883289.1 PFAM: Alpha/beta hydrolase of unknown function (DUF1023) YP_002883292.1 catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis YP_002883293.1 PFAM: sugar-binding domain; Sigma-70, region 4 YP_002883294.1 PFAM: FAD dependent oxidoreductase YP_002883295.1 PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_002883296.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_002883297.1 PFAM: Glycosyl hydrolases family 43; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002883298.1 PFAM: FMN-dependent dehydrogenase YP_002883303.1 PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain YP_002883304.1 TIGRFAM: conserved hypothetical protein TIGR00026 YP_002883305.1 PFAM: Bacterial regulatory proteins, tetR family; Tetracyclin repressor, C-terminal all-alpha domain YP_002883306.1 PFAM: Amino acid permease YP_002883307.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883308.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883309.1 PFAM: Bacterial extracellular solute-binding protein YP_002883311.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase YP_002883312.1 catalyzes the interconversion of D-xylose to D-xylulose YP_002883313.1 PFAM: ROK family YP_002883314.1 PFAM: short chain dehydrogenase YP_002883315.1 PFAM: Bacterial membrane flanked domain YP_002883316.1 PFAM: Bacterial membrane flanked domain YP_002883317.1 PFAM: Glucuronate isomerase YP_002883318.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002883319.1 PFAM: Xylose isomerase-like TIM barrel YP_002883320.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002883321.1 PFAM: Xylose isomerase-like TIM barrel YP_002883322.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_002883323.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002883324.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002883325.1 TIGRFAM: conserved hypothetical protein YP_002883327.1 PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain YP_002883328.1 PFAM: Bacterial extracellular solute-binding protein YP_002883329.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883330.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883331.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_002883332.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883335.1 PFAM: Siderophore-interacting FAD-binding domain; Siderophore-interacting protein YP_002883336.1 PFAM: Cupin domain YP_002883337.1 PFAM: Major Facilitator Superfamily YP_002883338.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883339.1 PFAM: Heparinase II/III-like protein YP_002883340.1 PFAM: Carbohydrate binding domain YP_002883345.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002883346.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883347.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883348.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_002883349.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002883351.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_002883352.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_002883353.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002883354.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002883355.1 PFAM: NmrA-like family YP_002883356.1 PFAM: Dihydrodipicolinate synthetase family YP_002883357.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_002883358.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate YP_002883359.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) YP_002883360.1 PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily; ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_002883361.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883364.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883366.1 PFAM: Clostridial binary toxin B/anthrax toxin PA YP_002883367.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_002883368.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002883369.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002883370.1 PFAM: Protein of unknown function (DUF993) YP_002883371.1 PFAM: Xylose isomerase-like TIM barrel YP_002883373.1 PFAM: Bacterial regulatory proteins, luxR family YP_002883375.1 PFAM: GMC oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase YP_002883376.1 PFAM: Amidohydrolase YP_002883377.1 PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily YP_002883378.1 PFAM: Protein of unknown function, DUF485 YP_002883379.1 PFAM: Sodium:solute symporter family YP_002883380.1 PFAM: Protein of unknown function, DUF485 YP_002883381.1 PFAM: LytTr DNA-binding domain; Response regulator receiver domain YP_002883382.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002883383.1 PFAM: Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain YP_002883386.1 PFAM: PIN domain YP_002883388.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family YP_002883390.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883391.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883392.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002883393.1 PFAM: Heparinase II/III-like protein; Carbohydrate binding domain YP_002883394.1 PFAM: F5/8 type C domain YP_002883395.1 PFAM: Heparinase II/III-like protein YP_002883396.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002883397.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_002883398.1 PFAM: Calcineurin-like phosphoesterase YP_002883400.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002883401.1 PFAM: Xylose isomerase-like TIM barrel YP_002883402.1 PFAM: Beta-galactosidase YP_002883403.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883404.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002883405.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883406.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883407.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_002883408.1 PFAM: ATPase family associated with various cellular activities (AAA); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA) YP_002883409.1 PFAM: Macro domain YP_002883410.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002883411.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883412.1 PFAM: Major Facilitator Superfamily YP_002883413.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_002883414.1 PFAM: L-asparaginase II YP_002883415.1 PFAM: Protein of unknown function (DUF2516) YP_002883417.1 TIGRFAM: prevent-host-death family protein YP_002883419.1 PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ YP_002883420.1 PFAM: Domain of unknown function (DUF1794) YP_002883423.1 PFAM: Transcriptional regulatory protein, C terminal YP_002883424.1 PFAM: Protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153 YP_002883425.1 PFAM: Phosphate transporter family YP_002883427.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_002883428.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_002883429.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC YP_002883430.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein YP_002883431.1 PFAM: phosphoglycerate mutase family; NUDIX domain YP_002883432.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_002883433.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: mycothiol biosynthesis acetyltransferase YP_002883436.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002883437.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2337) YP_002883438.1 PFAM: Iron-sulphur cluster biosynthesis YP_002883439.1 PFAM: META domain YP_002883441.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_002883442.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883443.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_002883444.1 PFAM: ABC transporter YP_002883446.1 PFAM: Major Facilitator Superfamily YP_002883447.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_002883448.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002883449.1 PFAM: Dihydrodipicolinate synthetase family YP_002883450.1 PFAM: FAD dependent oxidoreductase YP_002883451.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_002883452.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_002883453.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002883454.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883455.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883456.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883458.1 TIGRFAM: conserved hypothetical protein TIGR00026 YP_002883459.1 PFAM: YCII-related protein domain YP_002883460.1 TIGRFAM: LPXTG-motif cell wall anchor domain YP_002883461.1 PFAM: CAAX amino terminal protease family YP_002883462.1 PFAM: EthD protein; TIGRFAM: conserved hypothetical protein YP_002883471.1 PFAM: Protein of unknown function (DUF322) YP_002883472.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002883475.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002883476.1 PFAM: Sortase family YP_002883480.1 PFAM: Pirin; Pirin C-terminal cupin domain YP_002883482.1 PFAM: Integral membrane protein DUF6 YP_002883483.1 PFAM: Membrane transport protein YP_002883484.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_002883485.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_002883486.1 PFAM: Protein of unknown function (DUF1212) YP_002883487.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_002883489.1 PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain YP_002883491.1 PFAM: NAD dependent epimerase/dehydratase family YP_002883492.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin YP_002883493.1 TIGRFAM: lycopene cyclase domain YP_002883494.1 TIGRFAM: lycopene cyclase domain YP_002883495.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase YP_002883496.1 PFAM: Squalene/phytoene synthase YP_002883497.1 PFAM: pfkB family carbohydrate kinase YP_002883498.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_002883499.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_002883500.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_002883501.1 PFAM: Bacterial regulatory protein, arsR family YP_002883502.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002883503.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883504.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883505.1 PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK YP_002883506.1 PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein; Tat (twin-arginine translocation) pathway signal sequence YP_002883507.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002883509.1 PFAM: Domain of unknown function (DUF1025) YP_002883510.1 PFAM: Protein of unknown function (DUF1006) YP_002883511.1 PFAM: MerR, DNA binding; MerR family regulatory protein YP_002883512.1 PFAM: Aldo/keto reductase family YP_002883513.1 PFAM: Acetyltransferase (GNAT) family YP_002883514.1 PFAM: short chain dehydrogenase YP_002883515.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain YP_002883516.1 PFAM: Protein of unknown function (DUF1469) YP_002883519.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_002883520.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_002883521.1 PFAM: Na+/H+ antiporter 1; DSBA-like thioredoxin domain; TIGRFAM: Na+/H+ antiporter NhaA YP_002883522.1 PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_002883523.1 PFAM: Phytanoyl-CoA dioxygenase (PhyH) YP_002883526.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_002883527.1 PFAM: RNB domain YP_002883530.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_002883531.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02957 family; RNA polymerase sigma factor, sigma-70 family YP_002883532.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_002883533.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_002883534.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase YP_002883535.1 PFAM: phosphotransferase enzyme family YP_002883536.1 PFAM: Major Facilitator Superfamily YP_002883538.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family YP_002883539.1 PFAM: Uncharacterised protein family (UPF0157) YP_002883540.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases YP_002883541.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase YP_002883542.1 PFAM: ROK family YP_002883543.1 PFAM: SIS domain YP_002883544.1 PFAM: Alpha-L-fucosidase YP_002883545.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_002883546.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase YP_002883547.1 PFAM: ABC-2 type transporter YP_002883548.1 PFAM: ABC transporter YP_002883549.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_002883551.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002883552.1 PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit YP_002883553.1 PFAM: Transcriptional regulator PadR-like family YP_002883555.1 PFAM: NADPH-dependent FMN reductase YP_002883556.1 PFAM: MarR family YP_002883557.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002883558.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883559.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883561.1 PFAM: Bacterial extracellular solute-binding protein YP_002883562.1 PFAM: Xylose isomerase-like TIM barrel YP_002883563.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_002883564.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase YP_002883565.1 PFAM: Siderophore-interacting FAD-binding domain; Siderophore-interacting protein YP_002883566.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_002883567.1 PFAM: Subtilase family YP_002883568.1 catalyzes the fumarate and succinate interconversion; fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source YP_002883569.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002883572.1 PFAM: Acyl-CoA oxidase; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, C-terminal domain YP_002883573.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883575.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883576.1 PFAM: Bacterial extracellular solute-binding protein YP_002883577.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883578.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883579.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2329) YP_002883581.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_002883582.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_002883583.1 PFAM: AsnC family YP_002883584.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002883585.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002883586.1 PFAM: DoxX YP_002883588.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_002883589.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_002883590.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_002883591.1 PFAM: MaoC like domain YP_002883593.1 PFAM: META domain YP_002883594.1 PFAM: Acetyltransferase (GNAT) family YP_002883595.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I YP_002883596.1 PFAM: phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein YP_002883598.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002883600.1 PFAM: Epoxide hydrolase N terminus YP_002883601.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_002883602.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_002883603.1 PFAM: NAD dependent epimerase/dehydratase family YP_002883604.1 PFAM: phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, N domain; phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_002883605.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_002883606.1 PFAM: Helix-turn-helix YP_002883608.1 PFAM: Protein of unknown function (DUF402) YP_002883612.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883613.1 PFAM: MerR family regulatory protein; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; MerR, DNA binding YP_002883614.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002883616.1 PFAM: Protein of unknown function (DUF718) YP_002883617.1 PFAM: Bacterial extracellular solute-binding protein YP_002883618.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883619.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883623.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_002883624.1 PFAM: Alpha-L-rhamnosidase N-terminal domain; Bacterial alpha-L-rhamnosidase YP_002883625.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883626.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883627.1 PFAM: Bacterial extracellular solute-binding protein YP_002883628.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: L-rhamnose isomerase, Streptomyces subtype YP_002883629.1 PFAM: Class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YP_002883630.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain YP_002883631.1 PFAM: HNH endonuclease YP_002883632.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002883633.1 PFAM: Aldo/keto reductase family YP_002883634.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883636.1 PFAM: ABC transporter YP_002883637.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002883638.1 PFAM: Staphylococcal nuclease homologue YP_002883639.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_002883641.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_002883642.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Stage II sporulation protein E (SpoIIE); TIGRFAM: PAS domain S-box; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002883643.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_002883644.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate YP_002883645.1 PFAM: SpoU rRNA Methylase family YP_002883646.1 PFAM: Helix-turn-helix YP_002883647.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily subfamily IIA hydrolase, TIGR01457 YP_002883649.1 PFAM: LemA family YP_002883650.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002883651.1 PFAM: short chain dehydrogenase YP_002883652.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_002883655.1 PFAM: NAD dependent epimerase/dehydratase family YP_002883656.1 PFAM: Methyltransferase domain YP_002883657.1 PFAM: ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_002883660.1 PFAM: MarR family YP_002883661.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_002883662.1 PFAM: Zinc carboxypeptidase YP_002883663.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883664.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883665.1 PFAM: FMN-binding domain YP_002883666.1 PFAM: Amidohydrolase family YP_002883667.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_002883668.1 PFAM: phosphoglycerate mutase family YP_002883669.1 PFAM: Methyltransferase domain YP_002883670.1 PFAM: FAD binding domain; Berberine and berberine like YP_002883671.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02957 family; RNA polymerase sigma factor, sigma-70 family YP_002883672.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_002883673.1 PFAM: Amidase YP_002883677.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_002883678.1 PFAM: Glucose inhibited division protein A YP_002883679.1 PFAM: Bacterial extracellular solute-binding protein YP_002883680.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883681.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883682.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_002883684.1 PFAM: Prokaryotic cytochrome b561 YP_002883685.1 PFAM: Alpha-L-rhamnosidase N-terminal domain; Bacterial alpha-L-rhamnosidase YP_002883686.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger YP_002883688.1 PFAM: Gram positive anchor; TIGRFAM: LPXTG-motif cell wall anchor domain YP_002883689.1 PFAM: Transcriptional regulator PadR-like family YP_002883690.1 PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; drug resistance transporter, EmrB/QacA subfamily YP_002883691.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_002883692.1 PFAM: Integral membrane protein DUF6 YP_002883693.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002883694.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883696.1 PFAM: Virulence activator alpha C-term; Transcriptional regulator PadR-like family YP_002883697.1 PFAM: Bacterial regulatory protein, arsR family YP_002883698.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002883699.1 PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family YP_002883700.1 PFAM: phosphotransferase enzyme family YP_002883701.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_002883703.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_002883704.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_002883705.1 PFAM: Helix-turn-helix YP_002883706.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_002883707.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002883708.1 PFAM: Bacterial regulatory protein, arsR family YP_002883709.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); Protein of unknown function, DUF255 YP_002883710.1 PFAM: MerR family regulatory protein YP_002883711.1 PFAM: DnaJ C terminal region; DnaJ domain YP_002883712.1 PFAM: GrpE YP_002883713.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_002883714.1 PFAM: phosphotransferase enzyme family YP_002883715.1 PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain YP_002883716.1 PFAM: Bacterial extracellular solute-binding protein YP_002883717.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883718.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883719.1 PFAM: Glycosyl hydrolases family 38 N-terminal domain YP_002883720.1 PFAM: Demethylmenaquinone methyltransferase YP_002883722.1 PFAM: short chain dehydrogenase YP_002883723.1 PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase YP_002883727.1 PFAM: Methyltransferase domain YP_002883728.1 PFAM: Dienelactone hydrolase family YP_002883729.1 PFAM: Bacterial regulatory protein, arsR family YP_002883730.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002883731.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_002883741.1 PFAM: Acyltransferase YP_002883743.1 PFAM: Hsp20/alpha crystallin family YP_002883744.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_002883745.1 PFAM: Pentapeptide repeats (8 copies) YP_002883746.1 PFAM: Beta-lactamase; Tetratricopeptide repeat YP_002883747.1 PFAM: HxlR-like helix-turn-helix YP_002883748.1 PFAM: Major Facilitator Superfamily YP_002883750.1 PFAM: Aminoglycoside/hydroxyurea antibiotic resistance kinase YP_002883751.1 PFAM: Citrate synthase; MerR family regulatory protein YP_002883752.1 PFAM: Citrate synthase YP_002883754.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002883755.1 PFAM: Nucleotidyltransferase domain YP_002883756.1 PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_002883757.1 PFAM: Acetyltransferase (GNAT) family YP_002883759.1 PFAM: ABC transporter YP_002883760.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883761.1 PFAM: NUDIX domain YP_002883763.1 PFAM: Acetyltransferase (GNAT) family YP_002883764.1 PFAM: DoxX YP_002883765.1 PFAM: RibD C-terminal domain YP_002883766.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002883767.1 PFAM: YCII-related protein domain YP_002883768.1 PFAM: Domain of unknown function (DUF1918) YP_002883770.1 PFAM: S4 domain YP_002883772.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_002883773.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate YP_002883774.1 PFAM: ROK family YP_002883775.1 PFAM: Dihydrodipicolinate synthetase family YP_002883776.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002883777.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883778.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883779.1 PFAM: Bacterial extracellular solute-binding protein YP_002883780.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_002883781.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_002883782.1 PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain YP_002883783.1 PFAM: Universal stress protein family; Osmosensitive K+ channel His kinase sensor domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002883784.1 PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit YP_002883785.1 PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002883786.1 PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA YP_002883789.1 PFAM: Acetyltransferase (GNAT) family YP_002883790.1 PFAM: Acetyltransferase (GNAT) family YP_002883792.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883793.1 PFAM: ABC transporter YP_002883794.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002883795.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883796.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883797.1 PFAM: Bacterial extracellular solute-binding protein YP_002883798.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002883799.1 PFAM: EthD protein; TIGRFAM: conserved hypothetical protein YP_002883800.1 PFAM: TIM-barrel signal transduction protein YP_002883801.1 PFAM: Uncharacterised protein family (UPF0261) YP_002883802.1 PFAM: ROK family YP_002883803.1 PFAM: Gram positive anchor; TIGRFAM: LPXTG-motif cell wall anchor domain YP_002883804.1 PFAM: F5/8 type C domain YP_002883805.1 PFAM: ABC-2 type transporter YP_002883806.1 PFAM: ABC transporter YP_002883807.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002883808.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002883809.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: small GTP-binding protein domain; translation elongation factor EF-G YP_002883810.1 PFAM: phosphotransferase enzyme family YP_002883811.1 PFAM: ABC transporter; TOBE domain YP_002883812.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883813.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily YP_002883817.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit YP_002883818.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) YP_002883819.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport YP_002883820.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_002883821.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_002883822.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002883823.1 PFAM: HNH endonuclease YP_002883825.1 PFAM: Sodium/hydrogen exchanger family YP_002883827.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_002883829.1 PFAM: Uncharacterized BCR, YitT family COG1284 YP_002883830.1 PFAM: phosphotransferase enzyme family; TIGRFAM: conserved hypothetical protein TIGR02569, Actinobacterial YP_002883831.1 PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026 YP_002883833.1 PFAM: Acetyltransferase (GNAT) family YP_002883841.1 PFAM: Glycosyl hydrolases family 31 YP_002883842.1 PFAM: short chain dehydrogenase YP_002883844.1 PFAM: Domain of unknown function (DU1801) YP_002883845.1 PFAM: RibD C-terminal domain YP_002883847.1 PFAM: Acetyltransferase (GNAT) family YP_002883848.1 PFAM: Cell envelope-related protein transcriptional attenuator domain; TIGRFAM: cell envelope-related protein function transcriptional attenuator common domain YP_002883849.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_002883850.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit YP_002883851.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit YP_002883852.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_002883853.1 PFAM: MaoC like domain YP_002883854.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, middle domain YP_002883855.1 PFAM: ATP-grasp domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; Biotin carboxylase C-terminal domain YP_002883856.1 PFAM: Carboxyl transferase domain YP_002883857.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_002883858.1 PFAM: Transketolase, C-terminal domain; Dehydrogenase E1 component; Transketolase, pyrimidine binding domain YP_002883859.1 PFAM: AsnC family YP_002883862.1 PFAM: Acetyltransferase (GNAT) family YP_002883864.1 PFAM: Mitochondrial small ribosomal subunit Rsm22 YP_002883865.1 PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF407); Domain of unknown function (DUF404) YP_002883866.1 PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily YP_002883867.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002883868.1 PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_002883869.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_002883871.1 PFAM: Sugar-specific transcriptional regulator TrmB YP_002883872.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002883873.1 PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family YP_002883874.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883876.1 PFAM: Heme oxygenase YP_002883877.1 PFAM: Bacterial protein of unknown function (DUF916) YP_002883881.1 PFAM: ABC transporter YP_002883882.1 PFAM: FecCD transport family YP_002883883.1 PFAM: Periplasmic binding protein YP_002883884.1 PFAM: Bacterial regulatory proteins, tetR family YP_002883885.1 PFAM: alpha/beta hydrolase fold YP_002883886.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002883887.1 PFAM: ABC transporter YP_002883888.1 PFAM: Bacterial regulatory proteins, tetR family; Tetracyclin repressor, C-terminal all-alpha domain YP_002883889.1 PFAM: Subtilase family YP_002883890.1 PFAM: Bacterial regulatory proteins, luxR family YP_002883891.1 PFAM: phosphotransferase enzyme family YP_002883892.1 PFAM: ABC transporter YP_002883894.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002883895.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002883896.1 PFAM: Bacterial regulatory proteins, tetR family; Tetracyclin repressor, C-terminal all-alpha domain YP_002883900.1 PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883901.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883902.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883903.1 PFAM: Bacterial extracellular solute-binding protein YP_002883904.1 PFAM: Sulfatase YP_002883905.1 PFAM: AhpC/TSA family; NHL repeat YP_002883906.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002883908.1 PFAM: HTH domain YP_002883910.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family YP_002883911.1 PFAM: Acetyltransferase (GNAT) family YP_002883912.1 PFAM: Protein of unknown function (DUF1778) YP_002883917.1 PFAM: Type I restriction modification DNA specificity domain YP_002883918.1 PFAM: N-6 DNA Methylase; TIGRFAM: type I restriction system adenine methylase (hsdM) YP_002883922.1 PFAM: Domain of Unknown Function (DUF1535) YP_002883924.1 PFAM: alpha/beta hydrolase fold YP_002883925.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002883927.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_002883928.1 PFAM: Uncharacterized BCR, YitT family COG1284 YP_002883929.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: phage conserved hypothetical protein YP_002883931.1 PFAM: Bacterial regulatory protein, arsR family YP_002883932.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002883933.1 PFAM: glycosyl hydrolase of unknown function (DUF1680) YP_002883936.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002883940.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_002883941.1 PFAM: Protein of unknown function, DUF624 YP_002883942.1 PFAM: short chain dehydrogenase YP_002883943.1 PFAM: Dihydrodipicolinate synthetase family YP_002883944.1 PFAM: Bacterial extracellular solute-binding protein YP_002883945.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883946.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883947.1 PFAM: SMP-30/Gluconolaconase/LRE-like region YP_002883948.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_002883950.1 PFAM: short chain dehydrogenase YP_002883952.1 PFAM: Prolyl oligopeptidase family YP_002883953.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002883954.1 PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family YP_002883956.1 PFAM: Methyltransferase domain YP_002883957.1 PFAM: CHRD domain YP_002883958.1 PFAM: Copper resistance protein D; Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) YP_002883959.1 PFAM: phosphotransferase enzyme family YP_002883960.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_002883961.1 PFAM: Protein of unknown function DUF58 YP_002883963.1 PFAM: von Willebrand factor A domain YP_002883964.1 PFAM: von Willebrand factor A domain YP_002883966.1 PFAM: HxlR-like helix-turn-helix YP_002883967.1 PFAM: NADP oxidoreductase coenzyme F420-dependent YP_002883968.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_002883969.1 PFAM: Transketolase, pyrimidine binding domain; Transketolase, C-terminal domain YP_002883970.1 PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit YP_002883972.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_002883973.1 PFAM: Membrane protein of unknown function YP_002883976.1 PFAM: Fructosamine kinase YP_002883977.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_002883978.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002883979.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_002883980.1 PFAM: Calcineurin-like phosphoesterase YP_002883982.1 PFAM: Bacterial regulatory proteins, gntR family; Periplasmic binding proteins and sugar binding domain of the LacI family YP_002883983.1 PFAM: Sulfatase YP_002883984.1 PFAM: ROK family YP_002883985.1 PFAM: Bacterial extracellular solute-binding protein YP_002883986.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883987.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883988.1 PFAM: Sulfatase YP_002883989.1 PFAM: PhoD-like phosphatase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002883990.1 PFAM: Glycosyl hydrolase family 76 YP_002883991.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_002883992.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883993.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883994.1 PFAM: Protein of unknown function (DUF1237) YP_002883996.1 PFAM: Acetyltransferase (GNAT) family YP_002883997.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883998.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002883999.1 PFAM: Bacterial extracellular solute-binding protein YP_002884001.1 PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_002884002.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_002884005.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002884006.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002884008.1 PFAM: Multicopper oxidase; Multicopper oxidase YP_002884009.1 PFAM: Bacterial regulatory proteins, tetR family YP_002884010.1 PFAM: Acetyltransferase (GNAT) family YP_002884011.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2330) YP_002884012.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_002884013.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_002884014.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase YP_002884015.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_002884016.1 PFAM: Uroporphyrinogen-III synthase HemD YP_002884017.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002884018.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_002884021.1 PFAM: Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: ATPase P; copper-(or silver)-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002884023.1 PFAM: Heavy-metal-associated domain YP_002884024.1 PFAM: Uncharacterised BCR, COG1937 YP_002884025.1 PFAM: Heavy-metal-associated domain YP_002884027.1 PFAM: ABC-2 type transporter YP_002884028.1 PFAM: ABC transporter YP_002884031.1 PFAM: CAAX amino terminal protease family YP_002884032.1 PFAM: Ketopantoate reductase PanE/ApbA C terminal; FAD dependent oxidoreductase; TIGRFAM: 2-dehydropantoate 2-reductase YP_002884033.1 PFAM: CAAX amino terminal protease family YP_002884034.1 PFAM: Short repeat of unknown function (DUF308) YP_002884035.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_002884036.1 PFAM: Protein phosphatase 2C YP_002884037.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002884038.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_002884039.1 PFAM: Carboxylesterase YP_002884040.1 PFAM: FCD domain; Bacterial regulatory proteins, gntR family YP_002884041.1 PFAM: Beta-lactamase YP_002884042.1 PFAM: Uncharacterised protein family (UPF0157) YP_002884044.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002884045.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002884046.1 PFAM: Bacterial regulatory proteins, tetR family YP_002884047.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C terminal domain YP_002884048.1 PFAM: Cellulase (glycosyl hydrolase family 5) YP_002884049.1 PFAM: NmrA-like family YP_002884050.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_002884052.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_002884053.1 PFAM: CutC family YP_002884054.1 PFAM: MlrC C-terminus; Protein of unknown function (DUF1485) YP_002884056.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; AlkA N-terminal domain YP_002884057.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_002884058.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002884059.1 PFAM: Acetyl xylan esterase (AXE1) YP_002884060.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002884061.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002884062.1 PFAM: Bacterial extracellular solute-binding protein YP_002884063.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_002884064.1 PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; DeoR-like helix-turn-helix domain YP_002884065.1 PFAM: Polysaccharide lyase family 8, N terminal alpha-helical domain; Polysaccharide lyase family 8, C-terminal beta-sandwich domain; Polysaccharide lyase family 8, super-sandwich domain YP_002884066.1 PFAM: Methyltransferase domain YP_002884067.1 PFAM: Bacterial regulatory proteins, tetR family YP_002884068.1 PFAM: Luciferase-like monooxygenase YP_002884069.1 PFAM: Beta-lactamase YP_002884070.1 PFAM: Protein of unknown function (DUF1269) YP_002884072.1 PFAM: PIN domain; TIGRFAM: Mycobacterium tuberculosis PIN domain family YP_002884073.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_002884074.1 PFAM: short chain dehydrogenase YP_002884075.1 PFAM: Aldo/keto reductase family YP_002884076.1 PFAM: Aldo/keto reductase family YP_002884077.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_002884078.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002884079.1 PFAM: YCII-related protein domain YP_002884081.1 PFAM: ABC transporter YP_002884083.1 PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit YP_002884084.1 PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family YP_002884085.1 PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family YP_002884086.1 PFAM: Methyltransferase domain YP_002884087.1 PFAM: YCII-related protein domain YP_002884088.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002884089.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_002884090.1 PFAM: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YP_002884091.1 PFAM: Caspase domain YP_002884093.1 PFAM: tRNA synthetases class I (M); Anticodon-binding domain; tRNA synthetases class I (I, L, M and V); TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_002884094.1 PFAM: Oxidoreductase molybdopterin binding domain YP_002884095.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_002884097.1 PFAM: Integral membrane protein DUF6 YP_002884098.1 PFAM: Secreted repeat of unknown function YP_002884100.1 PFAM: phosphotransferase enzyme family YP_002884101.1 PFAM: Domain of unknown function (DU1801) YP_002884103.1 PFAM: DoxX YP_002884104.1 PFAM: Major Facilitator Superfamily YP_002884105.1 PFAM: Transcriptional regulator PadR-like family YP_002884107.1 PFAM: HxlR-like helix-turn-helix YP_002884108.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_002884109.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_002884110.1 PFAM: NAD dependent epimerase/dehydratase family YP_002884111.1 PFAM: Sulfatase YP_002884112.1 TIGRFAM: LPXTG-motif cell wall anchor domain YP_002884113.1 PFAM: Cna protein B-type domain; TIGRFAM: LPXTG-motif cell wall anchor domain YP_002884114.1 PFAM: YCII-related protein domain YP_002884118.1 PFAM: Domain of unknown function (DUF1905) YP_002884119.1 PFAM: Fibronectin type III domain YP_002884120.1 PFAM: Aldo/keto reductase family YP_002884121.1 PFAM: Cupin domain YP_002884122.1 PFAM: Helix-turn-helix YP_002884123.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain YP_002884124.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_002884126.1 PFAM: RibD C-terminal domain YP_002884127.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2255) YP_002884128.1 PFAM: Aldo/keto reductase family YP_002884129.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002884130.1 PFAM: YCII-related protein domain YP_002884135.1 PFAM: Bacterial regulatory proteins, luxR family YP_002884136.1 PFAM: Sulfatase YP_002884138.1 PFAM: Protein of unknown function (DUF664) YP_002884139.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002884140.1 PFAM: Methyltransferase domain YP_002884142.1 PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family YP_002884143.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_002884145.1 PFAM: Bacterial low temperature requirement A protein (LtrA) YP_002884146.1 PFAM: GIY-YIG catalytic domain YP_002884147.1 TIGRFAM: conserved hypothetical protein TIGR00026 YP_002884148.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_002884150.1 PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_002884151.1 PFAM: Protein of unknown function (DUF1684) YP_002884152.1 PFAM: Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_002884153.1 PFAM: MarR family YP_002884154.1 PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026 YP_002884156.1 PFAM: Region found in RelA / SpoT proteins YP_002884158.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_002884159.1 PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain YP_002884160.1 PFAM: Transcriptional regulator PadR-like family YP_002884161.1 PFAM: ABC transporter YP_002884162.1 PFAM: Predicted permease YP_002884163.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_002884164.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002884165.1 PFAM: Bacterial regulatory protein, arsR family YP_002884166.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_002884168.1 TIGRFAM: conserved hypothetical protein YP_002884169.1 PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA polymerase LigD, polymerase domain YP_002884171.1 PFAM: OB-fold nucleic acid binding domain; tRNA synthetases class II (D, K and N) YP_002884172.1 PFAM: Acetyltransferase (GNAT) family YP_002884173.1 PFAM: Helix-turn-helix YP_002884174.1 PFAM: short chain dehydrogenase YP_002884175.1 PFAM: DnaB-like helicase C terminal domain; DnaB-like helicase N terminal domain; TIGRFAM: replicative DNA helicase YP_002884176.1 PFAM: MatE; TIGRFAM: efflux protein, MATE family YP_002884178.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_002884179.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002884180.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_002884181.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_002884182.1 PFAM: Transglycosylase; PASTA domain; Penicillin binding protein transpeptidase domain YP_002884183.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_002884184.1 PFAM: short chain dehydrogenase YP_002884185.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002884186.1 PFAM: Xylose isomerase-like TIM barrel YP_002884187.1 PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_002884188.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2090) YP_002884189.1 PFAM: pfkB family carbohydrate kinase YP_002884190.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_002884191.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_002884192.1 PFAM: Metallo-beta-lactamase superfamily YP_002884193.1 PFAM: short chain dehydrogenase YP_002884194.1 TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type YP_002884196.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002884197.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_002884198.1 PFAM: Bacterial extracellular solute-binding protein YP_002884199.1 PFAM: Glycosyl hydrolases family 43 YP_002884200.1 PFAM: Transcriptional regulator PadR-like family YP_002884201.1 PFAM: Myo-inositol-1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase, Actinobacterial type YP_002884202.1 PFAM: Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; E1-E2 ATPase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002884203.1 PFAM: Major Facilitator Superfamily YP_002884204.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_002884206.1 PFAM: Epoxide hydrolase N terminus; alpha/beta hydrolase fold YP_002884207.1 PFAM: Poly A polymerase head domain; HD domain; TIGRFAM: uncharacterized domain HDIG; tRNA adenylyltransferase YP_002884208.1 PFAM: NUDIX domain YP_002884210.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_002884212.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_002884213.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_002884214.1 PFAM: Aminotransferase class I and II YP_002884215.1 PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_002884217.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_002884218.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_002884220.1 PFAM: Methyltransferase small domain; TIGRFAM: glucose-inhibited division protein B YP_002884221.1 PFAM: R3H domain YP_002884222.1 PFAM: 60Kd inner membrane protein YP_002884223.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278 YP_002884224.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial YP_002884225.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type