; retrieve-seq -v -org Borrelia_burgdorferi_ZS7_uid59429 -all -type downstream -feattype CDS -from 0 -to -2 -format wc -nocomment -label id,ctg,reg_left,reg_right,orf_strand -o /software/CC/bio/opt/rsat/rsa-tools//public_html/data/genomes/Borrelia_burgdorferi_ZS7_uid59429/genome/Borrelia_burgdorferi_ZS7_uid59429_stop_codons.wc
; organism      	Borrelia_burgdorferi_ZS7_uid59429
; sequence type 	downstream
; feature type  	cds
; Output format 	wc
; Line width    	60
; relative coordinates
;        from    -2
;        to      0
;        size    3
; Queries       	1239
;
YP_002364640.1|NC_011720.1|1999|2001|D	\TAA\
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YP_002364644.1|NC_011720.1|4514|4516|D	\TAA\
YP_002364645.1|NC_011720.1|5336|5338|D	\TAA\
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YP_002380626.1|NC_011731.1|24750|24752|D	\TGA\
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YP_002380710.1|NC_011735.1|22840|22842|D	\TAA\
YP_002380711.1|NC_011735.1|24653|24655|D	\TGA\
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YP_002380714.1|NC_011735.1|27034|27036|D	\TAA\
YP_002380715.1|NC_011735.1|27707|27709|D	\TAA\
YP_002380716.1|NC_011735.1|28455|28457|D	\TGA\
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YP_002380721.1|NC_011736.1|4920|4922|D	\TAA\
YP_002380722.1|NC_011736.1|5395|5397|D	\TAA\
YP_002380723.1|NC_011736.1|5778|5780|D	\TAG\
YP_002380724.1|NC_011736.1|6155|6157|D	\TGA\
YP_002380725.1|NC_011736.1|6721|6723|D	\TAG\
YP_002380726.1|NC_011736.1|7814|7816|D	\TAA\
YP_002380727.1|NC_011736.1|8257|8259|D	\TAA\
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YP_002380734.1|NC_011736.1|12861|12863|D	\TGA\
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YP_002380736.1|NC_011736.1|14348|14350|D	\TAA\
YP_002380737.1|NC_011736.1|15167|15169|D	\TAA\
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YP_002380739.1|NC_011736.1|15798|15800|D	\TAA\
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YP_002380741.1|NC_011736.1|16469|16471|D	\TAA\
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YP_002380755.1|NC_011736.1|28865|28867|D	\TAA\
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YP_002455223.1|NC_011778.1|25680|25682|D	\TAG\
YP_002455224.1|NC_011778.1|25838|25840|R	\TAA\
YP_002455225.1|NC_011778.1|26610|26612|R	\TAG\
YP_002455226.1|NC_011778.1|27408|27410|R	\TAG\
YP_002455227.1|NC_011778.1|29502|29504|R	\TAA\
YP_002455228.1|NC_011778.1|33042|33044|D	\TAA\
YP_002455229.1|NC_011778.1|33107|33109|R	\TAA\
YP_002455230.1|NC_011778.1|34621|34623|R	\TGA\
YP_002455231.1|NC_011778.1|36436|36438|D	\TAA\
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YP_002455233.1|NC_011779.1|5408|5410|D	\TAA\
YP_002455234.1|NC_011779.1|5990|5992|D	\TAG\
YP_002455235.1|NC_011779.1|6718|6720|D	\TAG\
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YP_002455237.1|NC_011779.1|7526|7528|R	\TAG\
YP_002455238.1|NC_011779.1|10819|10821|R	\TGA\
YP_002455239.1|NC_011779.1|11106|11108|R	\TAG\
YP_002455240.1|NC_011779.1|11544|11546|R	\TAG\
YP_002455241.1|NC_011779.1|12352|12354|R	\TGA\
YP_002455242.1|NC_011779.1|13210|13212|D	\TAA\
YP_002455243.1|NC_011779.1|13200|13202|R	\TGA\
YP_002455244.1|NC_011779.1|13551|13553|R	\TAA\
YP_002455245.1|NC_011779.1|14419|14421|R	\TGA\
YP_002455246.1|NC_011779.1|14929|14931|R	\TAA\
YP_002455247.1|NC_011779.1|15500|15502|R	\TAG\
YP_002455248.1|NC_011779.1|16537|16539|R	\TAA\
YP_002455249.1|NC_011779.1|17724|17726|R	\TGA\
YP_002455250.1|NC_011779.1|18073|18075|R	\TAG\
YP_002455251.1|NC_011779.1|18880|18882|R	\TAG\
YP_002455252.1|NC_011779.1|19663|19665|R	\TAG\
YP_002455253.1|NC_011779.1|22316|22318|R	\TAA\
YP_002455254.1|NC_011779.1|22702|22704|R	\TAA\
YP_002455255.1|NC_011779.1|23076|23078|R	\TAA\
YP_002455256.1|NC_011779.1|23765|23767|R	\TGA\
YP_002455257.1|NC_011779.1|25996|25998|D	\TAA\
YP_002455258.1|NC_011779.1|26431|26433|D	\TAA\
YP_002455259.1|NC_011779.1|27126|27128|D	\TGA\
YP_002455260.1|NC_011779.1|27981|27983|D	\TGA\
YP_002455261.1|NC_011779.1|28818|28820|D	\TAG\
YP_002455262.1|NC_011779.1|28843|28845|R	\TAA\
YP_002455263.1|NC_011780.1|9349|9351|D	\TAA\
YP_002455264.1|NC_011780.1|9931|9933|D	\TAA\
YP_002455265.1|NC_011780.1|10671|10673|D	\TGA\
YP_002455266.1|NC_011780.1|11259|11261|D	\TGA\
YP_002455267.1|NC_011780.1|12855|12857|D	\TGA\
YP_002455268.1|NC_011780.1|13152|13154|D	\TAG\
YP_002455269.1|NC_011780.1|13371|13373|D	\TAA\
YP_002455270.1|NC_011780.1|16625|16627|R	\TGA\
YP_002455271.1|NC_011780.1|18908|18910|D	\TAA\
YP_002455272.1|NC_011780.1|19839|19841|D	\TGA\
YP_002455273.1|NC_011780.1|21182|21184|D	\TAG\
YP_002455274.1|NC_011780.1|21276|21278|D	\TGA\
YP_002455275.1|NC_011780.1|23015|23017|D	\TAA\
YP_002455276.1|NC_011781.1|950|952|D	\TAA\
YP_002455277.1|NC_011781.1|1597|1599|D	\TAA\
YP_002455278.1|NC_011781.1|3142|3144|D	\TAA\
YP_002455279.1|NC_011781.1|6356|6358|R	\TAA\
YP_002455280.1|NC_011781.1|9148|9150|R	\TGA\
YP_002455281.1|NC_011781.1|9873|9875|R	\TAG\
YP_002455282.1|NC_011781.1|10601|10603|R	\TAA\
YP_002455283.1|NC_011781.1|11160|11162|R	\TAA\
YP_002455284.1|NC_011781.1|14560|14562|D	\TAA\
YP_002455285.1|NC_011781.1|14863|14865|R	\TAA\
YP_002455286.1|NC_011781.1|15355|15357|R	\TAA\
YP_002455287.1|NC_011781.1|17756|17758|D	\TGA\
YP_002455288.1|NC_011781.1|18672|18674|D	\TAG\
YP_002455289.1|NC_011781.1|20091|20093|R	\TAA\
YP_002455290.1|NC_011781.1|20520|20522|D	\TAA\
YP_002455291.1|NC_011781.1|24628|24630|D	\TAA\
YP_002455292.1|NC_011781.1|24930|24932|D	\TAA\
YP_002455293.1|NC_011781.1|26259|26261|D	\TAG\
YP_002455294.1|NC_011781.1|26843|26845|R	\TAG\
YP_002455295.1|NC_011781.1|27155|27157|R	\TAA\
YP_002455296.1|NC_011781.1|27448|27450|R	\TAA\
YP_002455297.1|NC_011781.1|27665|27667|R	\TAA\
YP_002455298.1|NC_011782.1|647|649|D	\TAA\
YP_002455299.1|NC_011782.1|1143|1145|D	\TAA\
YP_002455300.1|NC_011782.1|1426|1428|R	\TAA\
YP_002455301.1|NC_011782.1|2380|2382|D	\TAG\
YP_002455302.1|NC_011782.1|4437|4439|D	\TAA\
YP_002455303.1|NC_011782.1|6357|6359|D	\TAA\
YP_002455304.1|NC_011782.1|6505|6507|R	\TGA\
YP_002455305.1|NC_011782.1|8261|8263|D	\TAA\
YP_002455306.1|NC_011782.1|8737|8739|D	\TAA\
YP_002455307.1|NC_011782.1|10005|10007|D	\TAA\
YP_002455308.1|NC_011782.1|10219|10221|R	\TGA\
YP_002455309.1|NC_011782.1|11372|11374|R	\TAA\
YP_002455310.1|NC_011782.1|14444|14446|D	\TAA\
YP_002455311.1|NC_011782.1|14704|14706|D	\TAA\
YP_002455312.1|NC_011783.1|348|350|R	\TAA\
YP_002455313.1|NC_011783.1|4444|4446|R	\TAA\
YP_002455314.1|NC_011783.1|4882|4884|D	\TAG\
YP_002455315.1|NC_011783.1|6579|6581|R	\TAG\
YP_002455316.1|NC_011783.1|7783|7785|D	\TGA\
YP_002455317.1|NC_011783.1|8207|8209|R	\TAA\
YP_002455318.1|NC_011783.1|8336|8338|R	\TAA\
YP_002455319.1|NC_011783.1|9591|9593|R	\TAA\
YP_002455320.1|NC_011783.1|10224|10226|R	\TAG\
YP_002455321.1|NC_011783.1|11522|11524|R	\TAA\
YP_002455322.1|NC_011783.1|12120|12122|R	\TAA\
YP_002455323.1|NC_011783.1|12854|12856|R	\TAG\
YP_002455324.1|NC_011783.1|13427|13429|R	\TAA\
YP_002455325.1|NC_011783.1|15078|15080|R	\TAA\
YP_002455326.1|NC_011783.1|18626|18628|R	\TAA\
YP_002455327.1|NC_011783.1|19374|19376|R	\TAA\
YP_002455328.1|NC_011783.1|21984|21986|R	\TAA\
YP_002455329.1|NC_011784.1|1090|1092|D	\TAA\
YP_002455330.1|NC_011784.1|1923|1925|D	\TAG\
YP_002455331.1|NC_011784.1|2001|2003|R	\TAA\
YP_002455332.1|NC_011784.1|2959|2961|R	\TAA\
YP_002455333.1|NC_011784.1|4623|4625|R	\TAA\
YP_002455334.1|NC_011784.1|5603|5605|D	\TGA\
YP_002455335.1|NC_011784.1|6472|6474|D	\TAA\
YP_002455336.1|NC_011784.1|7101|7103|D	\TGA\
YP_002455337.1|NC_011784.1|8197|8199|D	\TAA\
YP_002455338.1|NC_011784.1|8399|8401|D	\TGA\
YP_002455339.1|NC_011784.1|8821|8823|D	\TAA\
YP_002455340.1|NC_011784.1|9176|9178|D	\TAA\
YP_002455341.1|NC_011784.1|10232|10234|D	\TAA\
YP_002455342.1|NC_011784.1|11132|11134|D	\TAA\
YP_002455343.1|NC_011784.1|12957|12959|D	\TAG\
YP_002455344.1|NC_011784.1|14317|14319|D	\TAA\
YP_002455345.1|NC_011784.1|14893|14895|D	\TGA\
YP_002455346.1|NC_011784.1|15811|15813|D	\TGA\
YP_002455347.1|NC_011784.1|16013|16015|R	\TAA\
YP_002455348.1|NC_011784.1|16717|16719|R	\TAA\
YP_002455349.1|NC_011784.1|18740|18742|D	\TAA\
YP_002455350.1|NC_011784.1|20096|20098|D	\TAA\
YP_002455351.1|NC_011784.1|21589|21591|D	\TAA\
YP_002455352.1|NC_011784.1|21649|21651|R	\TAA\
YP_002455353.1|NC_011784.1|24378|24380|D	\TAA\
YP_002455354.1|NC_011784.1|25066|25068|D	\TAG\
YP_002455355.1|NC_011784.1|26657|26659|D	\TAA\
YP_002455356.1|NC_011784.1|27951|27953|D	\TAA\
YP_002455357.1|NC_011784.1|29711|29713|D	\TGA\
YP_002455358.1|NC_011784.1|30025|30027|D	\TAA\
YP_002455359.1|NC_011784.1|30586|30588|D	\TAA\
YP_002455360.1|NC_011784.1|31723|31725|D	\TAA\
YP_002455361.1|NC_011784.1|32145|32147|D	\TAA\
YP_002455362.1|NC_011784.1|32692|32694|D	\TAA\
YP_002455363.1|NC_011784.1|32903|32905|D	\TAA\
YP_002455364.1|NC_011784.1|34918|34920|D	\TAA\
YP_002455365.1|NC_011784.1|35803|35805|D	\TAA\
YP_002455366.1|NC_011784.1|36199|36201|D	\TAG\
YP_002455367.1|NC_011784.1|38133|38135|R	\TAA\
YP_002455368.1|NC_011784.1|39845|39847|R	\TAA\
YP_002455369.1|NC_011784.1|40184|40186|R	\TAA\
YP_002455370.1|NC_011784.1|41369|41371|R	\TAA\
YP_002455371.1|NC_011784.1|42444|42446|D	\TAA\
YP_002455372.1|NC_011784.1|42488|42490|R	\TAG\
YP_002455373.1|NC_011784.1|42597|42599|R	\TAA\
YP_002455374.1|NC_011784.1|43669|43671|R	\TAA\
YP_002455375.1|NC_011784.1|44696|44698|R	\TAA\
YP_002455376.1|NC_011784.1|46240|46242|D	\TAG\
YP_002455377.1|NC_011784.1|46450|46452|R	\TAA\
YP_002455378.1|NC_011784.1|47453|47455|R	\TAA\
YP_002455379.1|NC_011784.1|48562|48564|R	\TAA\
YP_002455380.1|NC_011784.1|49415|49417|R	\TAA\
YP_002455381.1|NC_011784.1|50266|50268|R	\TAA\
YP_002455382.1|NC_011784.1|52457|52459|D	\TAG\
YP_002455383.1|NC_011784.1|53481|53483|D	\TGA\
YP_002455384.1|NC_011785.1|933|935|D	\TAA\
YP_002455385.1|NC_011785.1|1614|1616|D	\TAA\
YP_002455386.1|NC_011785.1|2593|2595|D	\TAA\
YP_002455387.1|NC_011785.1|3334|3336|D	\TAA\
YP_002455388.1|NC_011785.1|3660|3662|R	\TAA\
YP_002455389.1|NC_011785.1|4822|4824|D	\TAA\
YP_002455390.1|NC_011785.1|5354|5356|D	\TAA\
YP_002455391.1|NC_011785.1|6818|6820|D	\TAA\
YP_002455392.1|NC_011785.1|9569|9571|D	\TAA\
YP_002455393.1|NC_011785.1|9854|9856|R	\TGA\
YP_002455394.1|NC_011785.1|12942|12944|D	\TGA\
YP_002455395.1|NC_011785.1|13493|13495|D	\TAA\
YP_002455396.1|NC_011785.1|14221|14223|D	\TAA\
YP_002455397.1|NC_011785.1|14852|14854|D	\TAA\
YP_002455398.1|NC_011785.1|18114|18116|R	\TAA\
YP_002455399.1|NC_011785.1|19533|19535|R	\TAA\
YP_002455400.1|NC_011785.1|20630|20632|R	\TAA\
YP_002455401.1|NC_011785.1|23110|23112|R	\TAA\
YP_002455402.1|NC_011785.1|24204|24206|R	\TAA\
YP_002455403.1|NC_011785.1|27658|27660|D	\TAA\
YP_002455404.1|NC_011785.1|27789|27791|R	\TAA\

; Host name	nic56
; Job started	2011_11_21.103556
; Job done	2011_11_21.103602
; Seconds	0.3