-- dump date   	20120504_135514
-- class       	Genbank::Gene
-- table       	gene_note
-- id	note
1165673	3-hydroxy-3-methylglutarate-CoA lyase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to EGAD:19426
1165732	amino acid efflux protein, LysE family, , authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML3358
1165787	glutathione-dependent formaldehyde dehydrogenase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to EGAD:20238
1165789	ATP-dependent helicase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:P37024
1165803	NADP-dependent malic enzyme, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:O30808
1165855	transcriptional regulator, LuxR family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15140544
1165859	transcriptional regulator, Fis family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML5216; match to protein family HMM PF02954; match to protein family HMM TIGR01199
1165863	transcriptional regulator, LacI family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:CC2053
1165864	ABC transporter, HlyB/MsbA family, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to OMNI:NTL02ML0644
1166001	invasion protein B, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:P35641
1166002	sensor histidine kinase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:13641465
1166032	membrane protein, , authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML5834
1166074	GGDEF domain, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15140377
1166082	phosphoglycerate mutase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:CC1351
1166084	cold-shock family protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:Q9Z3S6; match to protein family HMM PF00313
1166162	lipoprotein, , authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML5937
1166174	transposase, degenerate, interruption-N; this gene contains a frame shift which is not the result of sequencing error
1166177	ISBm2, transposase orfA, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to GP:4071218; match to protein family HMM PF01527
1166178	ISBm2, transposase orfB, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:12620749
1166187	transposase, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by match to protein family HMM PF00665
1166194	transposase, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to SP:P05822
1166198	transposase, truncation; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to GP:17983395
1166258	conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15155968
1166263	conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15155976
1166530	amino acid ABC transporter, periplasmic amino acid-binding protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15074804
1166586	peptide chain release factor 2, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15619432
1166589	IS711, transposase orfB, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to PIR:PN0685
1166619	membrane protein, , authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:15074450
1166649	queuine tRNA-ribosyltransferase, truncation; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to SP:O32053; match to protein family HMM PF01702; match to protein family HMM TIGR00449
1166651	IS711, transposase orfB, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to PIR:PN0685
1166700	thioredoxin reductase, , authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0627
1166715	membrane protein, , authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:9105279
1166864	propionyl-CoA carboxylase, beta subunit, , internal deletion; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15141335
1166934	CBS domain protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0146
1166994	acyl-CoA dehydrogenase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0952
1166999	transcriptional regulator, LysR family, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0986
1167001	oxidase/dehydrogenase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0993
1167003	membrane protein, , authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL01SM02005
1167058	conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL01SM02043
1167130	peptidoglycan-binding protein, , authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML1242
1167131	transporter, , authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15981705
1167196	transglycosylase, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to GP:15074494; match to protein family HMM PF01464
1167227	ABC transporter, ATP-binding/permease, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by match to protein family HMM PF00005; match to protein family HMM PF00664
1167228	ABC transporter, ATP-binding/permease, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML2098
1167230	purine nucleoside permease, , authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:3581905
1167235	conserved domain protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:9454389
1167269	peptide ABC transporter, periplasmic peptide-binding protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:12082083
1167313	dihydroxyacetone kinase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15141347
1167314	dihydroxyacetone kinase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15141347
1167322	oxidoreductase, GMC family, degenerate; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error;identified by similarity to OMNI:NTL02ML2014
1167363	ABC transporter, ATP-binding/permease, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to GP:15075093
1167411	transcriptional regulator, GntR family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML5856
1167463	photosynthesis protein modulator, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to EGAD:40368
1167473	transporter, , authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to SP:Q07609
1167481	branched-chain amino acid ABC transporter, ATP-binding protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to EGAD:14464
1167486	D-amino acid dehydrogenase, small subunit, , authentic frameshift; this gene contains a frame shift which is not the result of sequencing error
1167581	transporter, , authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:15076110
1167594	transcriptional regulator, GntR family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL02ML0901
1167609	conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL01BM0154
1167655	amino acid ABC transporter, permease, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to OMNI:NTL01CA0879
1167668	cysteine synthase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error;identified by similarity to SP:P73410
1164521	This region contains an authentic frame shift and is not the result of a sequencing artifact; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase, authentic frameshift; similar to GP:15075909, GB:D13626, and PID:285995; identified by sequence similarity
1164522	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; conserved hypothetical protein, authentic point mutation; similar to GP:4063783, and GP:4063783; identified by sequence similarity
1164554	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; HlyD family secretion protein, authentic point mutation
1164559	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; flagellar motor switch protein FliG, authentic point mutation; similar to SP:O54244; identified by sequence similarity
1164586	This region contains an authentic frame shift and is not the result of a sequencing artifact; 3-hydroxyisobutyrate dehydrogenase, authentic frameshift; similar to GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, and PID:386807; identified by sequence similarity
1164627	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; glucose/galactose transporter, authentic point mutation; similar to SP:Q44623, GB:S68805, SP:P50440, and PID:791049; identified by sequence similarity
1164645	This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; peptidase, M16 family, degenerate
1164662	This region contains an authentic frame shift and is not the result of a sequencing artifact; oxidoreductase, FMN-binding, authentic frameshift
1164666	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; DNA-binding response regulator, authentic point mutation; similar to GP:15159265, GB:J00230, SP:P01857, SP:P01859, SP:P01860, SP:P01861, PID:1335110, PID:1335112, PID:1335113, PID:184758, PID:567112, and PID:577056; identified by sequence similarity
1164709	This region contains an authentic frame shift and is not the result of a sequencing artifact; ABC transporter, ATP-binding protein, authentic frameshift; identified by match to TIGR protein family HMM TIGR00954
1164776	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; glutamate decarboxylase, authentic point mutation; similar to SP:P34210, and PID:550102; identified by sequence similarity
1164777	This region contains an authentic frame shift and is not the result of a sequencing artifact; amino acid antiporter, , authentic frameshift; similar to GP:6009438, and SP:Q54152; identified by sequence similarity
1164832	This region contains an authentic frame shift and is not the result of a sequencing artifact; branched-chain amino acid ABC transporter, ATP-binding/permease, authentic frameshift; similar to GP:17985077, GB:M99427, PID:151709, and SP:Q52451; identified by sequence similarity
1164850	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; Bme15 protein, authentic point mutation; similar to GP:5478245, and SP:Q9KR69; identified by sequence similarity
1164858	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; glycosyltransferase, , authentic point mutation; similar to GP:5478238, and GP:5478238; identified by sequence similarity
1164863	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; membrane protein Bme3, authentic point mutation; similar to GP:5478234, and GP:5478234; identified by sequence similarity
1164902	This region contains an authentic frame shift and is not the result of a sequencing artifact; ABC transporter, ATP-binding protein, authentic frameshift
1164908	This region contains an authentic frame shift and is not the result of a sequencing artifact; transcriptional regulator, MarR family, authentic frameshift; similar to GP:15074064, and GP:15074064; identified by sequence similarity
1164989	This region contains an authentic frame shift and is not the result of a sequencing artifact; IS711, transposase orfB FRAMESHIFT; similar to PIR:PN0685; identified by sequence similarity
1164992	This region contains an authentic frame shift and is not the result of a sequencing artifact; ISBm1, transposase orfB, interruption-C; similar to GP:4071222, and GP:4071222; identified by sequence similarity
1164997	This region contains an authentic frame shift and is not the result of a sequencing artifact; ISBm1, transposase orfA, interruption-N; similar to GP:4071219, and GP:4071219; identified by sequence similarity
1165105	This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GP:15157319; identified by sequence similarity
1165109	This region contains an authentic frame shift and is not the result of a sequencing artifact; branched-chain amino acid aminotransferase, , authentic frameshift; similar to SP:P00510; identified by sequence similarity
1165132	This region contains an authentic frame shift and is not the result of a sequencing artifact; sugar ABC transporter, ATP-binding protein, authentic frameshift; similar to GP:15076324, and GP:17984770; identified by sequence similarity
1165138	This region contains an authentic frame shift and is not the result of a sequencing artifact; fdhD protein, authentic frameshift; similar to GP:11545454, GB:X60787, GB:S41456, SP:Q01167, PID:1388160, and PID:33854; identified by sequence similarity
1165155	This region contains an authentic frame shift and is not the result of a sequencing artifact; carbohydrate kinase, PfkB family, authentic frameshift; similar to GP:15158706; identified by sequence similarity
1165158	This region contains an authentic frame shift and is not the result of a sequencing artifact; iolB protein, authentic frameshift; similar to GP:15158709; identified by sequence similarity
1165218	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; multidrug resistance protein, , authentic point mutation
1165222	This region contains an authentic frame shift and is not the result of a sequencing artifact; 6-phosphogluconate dehydratase, authentic frameshift; similar to SP:Q9Z3S0; identified by sequence similarity
1165225	This region contains an authentic frame shift and is not the result of a sequencing artifact; peptide ABC transporter, ATP-binding protein, authentic frameshift; similar to GP:15161804, and SP:P75796; identified by sequence similarity
1165240	This region contains an authentic frame shift and is not the result of a sequencing artifact; transcriptional regulator, LysR family, , authentic frameshift; similar to GP:3152946, and GP:3152946; identified by sequence similarity
1165250	This region contains an authentic frame shift and is not the result of a sequencing artifact; ABC transporter, permease, authentic frameshift
1165253	This region contains an authentic frame shift and is not the result of a sequencing artifact; mannitol dehydrogenase, authentic frameshift; similar to GP:15141329, GB:Y00318, SP:P05156, PID:1335054, PID:1335055, PID:1335056, and PID:182607; identified by sequence similarity
1165257	This region contains an authentic frame shift and is not the result of a sequencing artifact; multidrug efflux protein, , authentic frameshift; similar to GP:15160108, and GP:17431673; identified by sequence similarity
1165288	This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; conserved hypothetical protein, degenerate; similar to GP:9947313; identified by sequence similarity
1165297	This region contains an authentic frame shift and is not the result of a sequencing artifact; oxidoreductase, FAD-binding, authentic frameshift
1165324	This region contains an authentic frame shift and is not the result of a sequencing artifact; citrate lyase, beta subunit, , authentic frameshift; similar to SP:P77770; identified by sequence similarity
1165388	This region contains an authentic frame shift and is not the result of a sequencing artifact; transcriptional regulator, GntR family, authentic frameshift; similar to GP:15160164, and GP:15160164; identified by sequence similarity
1165422	This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GB:L07414, GB:Z15017, GB:X96710, SP:P29965, PID:1518170, PID:180124, PID:37270, PID:38412, and PID:38484; identified by sequence similarity
1165429	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; transcriptional regulator, , authentic point mutation; similar to GP:15075893; identified by sequence similarity
1165451	This region contains an authentic frame shift and is not the result of a sequencing artifact; glutamyl-tRNA(Gln) amidotransferase, A subunit, , authentic frameshift; similar to GP:15158785, SP:Q05370, and PID:49224; identified by sequence similarity
1165530	This region contains an authentic frame shift and is not the result of a sequencing artifact; dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase, , authentic frameshift; similar to GP:3077808, and SP:P27747; identified by sequence similarity
1165532	This region contains an authentic frame shift and is not the result of a sequencing artifact; dehydrogenase complex, E1 component, dehydrogenase, authentic frameshift
1165542	This region contains an authentic frame shift and is not the result of a sequencing artifact; peptide ABC transporter, ATP-binding protein, , authentic frameshift; similar to SP:P24137; identified by sequence similarity
1165547	This region contains an authentic frame shift and is not the result of a sequencing artifact; peptide ABC transporter, permease, , authentic frameshift; similar to GP:14799990; identified by sequence similarity
1165551	This region contains an authentic frame shift and is not the result of a sequencing artifact; polyamine ABC transporter, periplasmic polyamine-binding protein, , authentic frameshift; similar to GP:14523615, and GP:18092558; identified by sequence similarity
1165554	This region contains an authentic frame shift and is not the result of a sequencing artifact; polyamine ABC transporter, ATP-binding protein, authentic point mutation; similar to GP:14523530, and GP:14523530; identified by sequence similarity
1165561	This region contains an authentic frame shift and is not the result of a sequencing artifact; D-lactate dehydrogenase, authentic frameshift; similar to SP:P06149, GB:M35107, SP:P24132, and PID:144747; identified by sequence similarity
1165596	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; chemotaxis motC protein, , authentic point mutation; similar to GP:15155509, GB:X04588, GB:J00312, GB:M12128, SP:P12324, PID:37424, and PID:553799; identified by sequence similarity
1165613	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; catechol 2,3-dioxygenase, authentic point mutation; similar to GP:3046913, GB:U08106, GB:U08107, GB:Z32772, GB:Z32773, GB:Z32774, GB:L13266, GB:L13267, GB:L13268, GB:L05666, SP:Q05586, PID:219920, PID:292287, PID:472846, and PID:472848; identified by sequence similarity
1165648	This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; branched-chain amino acid ABC transporter, permease, authentic point mutation; similar to GP:18160076; identified by sequence similarity