-- dump date 20140619_011847 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_777640.1 27904514 1058183 469..2349 1 NC_004545.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2349 gidA 1058183 gidA Buchnera aphidicola str. Bp (Baizongia pistaciae) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA NP_777640.1 469 D 224915 CDS NP_777641.1 27904515 1058187 2668..3492 1 NC_004545.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 3492 atpB 1058187 atpB Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP synthase F0F1 subunit A NP_777641.1 2668 D 224915 CDS NP_777642.1 27904516 1058189 3545..3784 1 NC_004545.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 3784 atpE 1058189 atpE Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP synthase F0F1 subunit C NP_777642.1 3545 D 224915 CDS NP_777643.1 27904517 1058389 3909..4379 1 NC_004545.1 COG0711; ATP synthase subunit B 4379 atpF 1058389 atpF Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP synthase subunit B NP_777643.1 3909 D 224915 CDS NP_777644.1 27904518 1058515 4392..4928 1 NC_004545.1 COG0712; ATP synthase subunit delta 4928 atpH 1058515 atpH Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP synthase subunit delta NP_777644.1 4392 D 224915 CDS NP_777645.1 27904519 1058523 4942..6486 1 NC_004545.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 6486 atpA 1058523 atpA Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP synthase F0F1 subunit alpha NP_777645.1 4942 D 224915 CDS NP_777646.1 27904520 1058528 6524..7399 1 NC_004545.1 COG0224; ATP synthase gamma chain 7399 atpG 1058528 atpG Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP synthase gamma chain NP_777646.1 6524 D 224915 CDS NP_777647.1 27904521 1058529 7427..8824 1 NC_004545.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 8824 atpD 1058529 atpD Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP synthase F0F1 subunit beta NP_777647.1 7427 D 224915 CDS NP_777648.1 27904522 1058530 8826..9263 1 NC_004545.1 COG0355; ATP synthase subunit epsilon 9263 atpC 1058530 atpC Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP synthase subunit epsilon NP_777648.1 8826 D 224915 CDS NP_777649.1 27904523 1058540 complement(9397..11811) 1 NC_004545.1 COG0187; DNA gyrase subunit b 11811 gyrB 1058540 gyrB Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA gyrase subunit b NP_777649.1 9397 R 224915 CDS NP_777650.1 27904524 1058341 complement(11994..13109) 1 NC_004545.1 COG0592; DNA polymerase III beta chain 13109 dnaN 1058341 dnaN Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA polymerase III beta chain NP_777650.1 11994 R 224915 CDS NP_777651.1 27904525 1058526 complement(13114..14487) 1 NC_004545.1 COG0593; chromosome replication initiator DnaA 14487 dnaA 1058526 dnaA Buchnera aphidicola str. Bp (Baizongia pistaciae) chromosome replication initiator DnaA NP_777651.1 13114 R 224915 CDS NP_777652.1 27904526 1058388 14903..15046 1 NC_004545.1 COG0230; 50S ribosomal protein L34 15046 rpmH 1058388 rpmH Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L34 NP_777652.1 14903 D 224915 CDS NP_777653.1 27904527 1058533 15067..15411 1 NC_004545.1 COG0594; RNase P protein; protein C5; ribonuclease P protein component 15411 rnpA 1058533 rnpA Buchnera aphidicola str. Bp (Baizongia pistaciae) ribonuclease P protein component NP_777653.1 15067 D 224915 CDS NP_777654.1 27904528 1058531 15390..15647 1 NC_004545.1 COG0759; hypothetical protein 15647 yidD 1058531 yidD Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777654.1 15390 D 224915 CDS NP_777655.1 27904529 1058375 15650..17260 1 NC_004545.1 COG0706; hypothetical protein 17260 yidC 1058375 yidC Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777655.1 15650 D 224915 CDS NP_777656.1 27904530 1058347 17419..18798 1 NC_004545.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 18798 trmE 1058347 trmE Buchnera aphidicola str. Bp (Baizongia pistaciae) tRNA modification GTPase TrmE NP_777656.1 17419 D 224915 CDS NP_777657.1 27904531 1058369 18848..19510 1 NC_004545.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 19510 mutH 1058369 mutH Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA mismatch repair protein NP_777657.1 18848 D 224915 CDS NP_777658.1 27904532 1058370 19865..20158 1 NC_004545.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 20158 groES 1058370 groES Buchnera aphidicola str. Bp (Baizongia pistaciae) co-chaperonin GroES NP_777658.1 19865 D 224915 CDS NP_777659.1 27904533 1058372 20209..21861 1 NC_004545.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 21861 groEL 1058372 groEL Buchnera aphidicola str. Bp (Baizongia pistaciae) molecular chaperone GroEL NP_777659.1 20209 D 224915 CDS NP_777660.1 27904534 1058374 complement(21944..22966) 1 NC_004545.1 COG1509; aminomutase 22966 yjeK 1058374 yjeK Buchnera aphidicola str. Bp (Baizongia pistaciae) aminomutase NP_777660.1 21944 R 224915 CDS NP_777661.1 27904535 1058342 23004..23573 1 NC_004545.1 COG0231; EF-P; elongation factor P 23573 efp 1058342 efp Buchnera aphidicola str. Bp (Baizongia pistaciae) elongation factor P NP_777661.1 23004 D 224915 CDS NP_777662.1 27904536 1058373 complement(23630..24370) 1 NC_004545.1 acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC 24370 dnaC 1058373 dnaC Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA replication protein DnaC NP_777662.1 23630 R 224915 CDS NP_777663.1 27904537 1058366 complement(24595..25185) 1 NC_004545.1 COG0742; methylase 25185 yhhF 1058366 yhhF Buchnera aphidicola str. Bp (Baizongia pistaciae) methylase NP_777663.1 24595 R 224915 CDS NP_777664.1 27904538 1058353 25316..26509 1 NC_004545.1 COG0552; FtsY protei 26509 ftsY 1058353 ftsY Buchnera aphidicola str. Bp (Baizongia pistaciae) FtsY protei NP_777664.1 25316 D 224915 CDS NP_777665.1 27904539 1058359 26669..27532 1 NC_004545.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 27532 rpoH 1058359 rpoH Buchnera aphidicola str. Bp (Baizongia pistaciae) RNA polymerase factor sigma-32 NP_777665.1 26669 D 224915 CDS NP_777666.1 27904540 1058365 complement(27630..29462) 1 NC_004545.1 COG0449; hexosephosphate aminotransferase; D-fructose-6- phosphate amidotransferase; GFAT; L-glutamine-D-fructose-6-phosphate amidotransferase; glucosamine-6-phosphate synthase; glucosamine-fructose-6-phosphate aminotransferase isomerizing 29462 glmS 1058365 glmS Buchnera aphidicola str. Bp (Baizongia pistaciae) glucosamine-fructose-6-phosphate aminotransferase isomerizing NP_777666.1 27630 R 224915 CDS NP_777667.1 27904541 1058362 complement(29548..30894) 1 NC_004545.1 COG1207; N-acetylglucosamine-1-phosphate uridyltransferase; UDP-N-acetylglucosamine pyrophosphorylase 30894 glmU 1058362 glmU Buchnera aphidicola str. Bp (Baizongia pistaciae) UDP-N-acetylglucosamine pyrophosphorylase NP_777667.1 29548 R 224915 CDS NP_777668.1 27904542 1058355 31189..31992 1 NC_004545.1 COG0561; YigL; haloacid dehalogenase-like hydrolase 31992 yigL 1058355 yigL Buchnera aphidicola str. Bp (Baizongia pistaciae) haloacid dehalogenase-like hydrolase NP_777668.1 31189 D 224915 CDS NP_777669.1 27904543 1058349 32186..34456 1 NC_004545.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 34456 metE 1058349 metE Buchnera aphidicola str. Bp (Baizongia pistaciae) 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase NP_777669.1 32186 D 224915 CDS NP_777670.1 27904544 1058351 complement(35810..37420) 1 NC_004545.1 COG0138; bifunctional purine biosynthesis protein PurH; AICAR transformylase; inosinicase; IMP synthetase; ATIC; phosphoribosylaminoimidazolecarboxamide formyltransferase 37420 purH 1058351 purH Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphoribosylaminoimidazolecarboxamide formyltransferase NP_777670.1 35810 R 224915 CDS NP_777671.1 27904545 1058507 complement(37493..37771) 1 NC_004545.1 COG0776; DNA-binding protein II; HB; DNA-binding protein HU 37771 hupA 1058507 hupA Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA-binding protein HU NP_777671.1 37493 R 224915 CDS NP_777672.1 27904546 1058521 complement(38178..42392) 1 NC_004545.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 42392 rpoC 1058521 rpoC Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA-directed RNA polymerase subunit beta' NP_777672.1 38178 R 224915 CDS NP_777673.1 27904547 1058520 complement(42481..46512) 1 NC_004545.1 COG0085; transcriptase beta chain; RNA polymerase beta subunit; DNA-directed RNA polymerase beta chain 46512 rpoB 1058520 rpoB Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA-directed RNA polymerase beta chain NP_777673.1 42481 R 224915 CDS NP_777674.1 27904548 1058186 complement(46740..47108) 1 NC_004545.1 COG0222; L8; 50S ribosomal protein L7/L12 47108 rplL 1058186 rplL Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L7/L12 NP_777674.1 46740 R 224915 CDS NP_777675.1 27904549 1058537 complement(47182..47688) 1 NC_004545.1 COG0244; L8; 50S ribosomal protein L10 47688 rplJ 1058537 rplJ Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L10 NP_777675.1 47182 R 224915 CDS NP_777676.1 27904550 1058184 complement(47970..48671) 1 NC_004545.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 48671 rplA 1058184 rplA Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L1 NP_777676.1 47970 R 224915 CDS NP_777677.1 27904551 1058535 complement(48668..49108) 1 NC_004545.1 COG0080; L11 protein; 50S ribosomal protein L11 49108 rplK 1058535 rplK Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L11 NP_777677.1 48668 R 224915 CDS NP_777678.1 27904552 1058538 complement(49323..49868) 1 NC_004545.1 COG0250; transcription antitermination protein 49868 nusG 1058538 nusG Buchnera aphidicola str. Bp (Baizongia pistaciae) transcription antitermination protein NP_777678.1 49323 R 224915 CDS NP_777679.1 27904553 1058527 complement(49873..50256) 1 NC_004545.1 COG0690; preprotein translocase SecE subunit 50256 secE 1058527 secE Buchnera aphidicola str. Bp (Baizongia pistaciae) preprotein translocase SecE subunit NP_777679.1 49873 R 224915 CDS NP_777680.1 27904554 1058361 complement(51395..52399) 1 NC_004545.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 52399 murB 1058361 murB Buchnera aphidicola str. Bp (Baizongia pistaciae) UDP-N-acetylenolpyruvoylglucosamine reductase NP_777680.1 51395 R 224915 CDS NP_777681.1 27904555 1058532 52577..53464 1 NC_004545.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 53464 metF 1058532 metF Buchnera aphidicola str. Bp (Baizongia pistaciae) 5,10-methylenetetrahydrofolate reductase NP_777681.1 52577 D 224915 CDS NP_777682.1 27904556 1058536 53764..54993 1 NC_004545.1 catalyzes ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate; argininosuccinate synthase 54993 argG 1058536 argG Buchnera aphidicola str. Bp (Baizongia pistaciae) argininosuccinate synthase NP_777682.1 53764 D 224915 CDS NP_777683.1 27904557 1058128 55107..56483 1 NC_004545.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 56483 argH 1058128 argH Buchnera aphidicola str. Bp (Baizongia pistaciae) argininosuccinate lyase NP_777683.1 55107 D 224915 CDS NP_777684.1 27904558 1058525 56667..57110 1 NC_004545.1 COG0607; hypothetical protein 57110 yibN 1058525 yibN Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777684.1 56667 D 224915 CDS NP_777685.1 27904559 1058156 57358..58122 1 NC_004545.1 COG1045; SAT; serine acetyltransferase 58122 cysE 1058156 cysE Buchnera aphidicola str. Bp (Baizongia pistaciae) serine acetyltransferase NP_777685.1 57358 D 224915 CDS NP_777686.1 27904560 1058190 complement(58313..60142) 1 NC_004545.1 COG0568; sigma-70; RNA polymerase sigma factor RpoD 60142 rpoD 1058190 rpoD Buchnera aphidicola str. Bp (Baizongia pistaciae) RNA polymerase sigma factor RpoD NP_777686.1 58313 R 224915 CDS NP_777687.1 27904561 1058193 complement(60380..62116) 1 NC_004545.1 COG0358; DNA primase 62116 dnaG 1058193 dnaG Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA primase NP_777687.1 60380 R 224915 CDS NP_777688.1 27904562 1058132 complement(62223..62438) 1 NC_004545.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 62438 rpsU 1058132 rpsU Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S21 NP_777688.1 62223 R 224915 CDS NP_777689.1 27904563 1058516 62606..63622 1 NC_004545.1 COG0533; glycoprotease; O-sialoglycoprotein endopeptidase 63622 gcp 1058516 gcp Buchnera aphidicola str. Bp (Baizongia pistaciae) O-sialoglycoprotein endopeptidase NP_777689.1 62606 D 224915 CDS NP_777690.1 27904564 1058191 complement(63734..64369) 1 NC_004545.1 COG0108; DHBP synthase; LuxH protein; 3,4-dihydroxy-2-butanone 4-phosphate synthase 64369 ribB 1058191 ribB Buchnera aphidicola str. Bp (Baizongia pistaciae) 3,4-dihydroxy-2-butanone 4-phosphate synthase NP_777690.1 63734 R 224915 CDS NP_777691.1 27904565 1058541 64717..65976 1 NC_004545.1 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase 65976 cca 1058541 cca Buchnera aphidicola str. Bp (Baizongia pistaciae) tRNA CCA-pyrophosphorylase NP_777691.1 64717 D 224915 CDS NP_777692.1 27904566 1058524 complement(65973..66779) 1 NC_004545.1 COG1968; undecaprenol kinase; bacitracin resistance protein 66779 bacA 1058524 bacA Buchnera aphidicola str. Bp (Baizongia pistaciae) bacitracin resistance protein NP_777692.1 65973 R 224915 CDS NP_777693.1 27904567 1058152 complement(66905..67411) 1 NC_004545.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter subunit 67411 crr 1058152 crr Buchnera aphidicola str. Bp (Baizongia pistaciae) PTS system glucose-specific transporter subunit NP_777693.1 66905 R 224915 CDS NP_777694.1 27904568 1058192 complement(67420..69150) 1 NC_004545.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 69150 ptsI 1058192 ptsI Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphoenolpyruvate-protein phosphotransferase NP_777694.1 67420 R 224915 CDS NP_777695.1 27904569 1058194 complement(69325..69582) 1 NC_004545.1 COG1925; histidine-containing protein; phosphocarrier protein HPr 69582 ptsH 1058194 ptsH Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphocarrier protein HPr NP_777695.1 69325 R 224915 CDS NP_777696.1 27904570 1058542 71142..73160 1 NC_004545.1 COG0272; polydeoxyribonucleotide synthase NAD+; DNA ligase 73160 lig 1058542 lig Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA ligase NP_777696.1 71142 D 224915 CDS NP_777697.1 27904571 1058176 73495..74913 1 NC_004545.1 COG0008; glutamate-tRNA ligase; GluRS; glutamyl-tRNA synthetase 74913 gltX 1058176 gltX Buchnera aphidicola str. Bp (Baizongia pistaciae) glutamyl-tRNA synthetase NP_777697.1 73495 D 224915 CDS NP_777698.1 27904572 1058198 complement(75190..75492) 1 NC_004545.1 COG1677; flagellar hook-basal body complex protein FliE 75492 fliE 1058198 fliE Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar hook-basal body complex protein FliE NP_777698.1 75190 R 224915 CDS NP_777699.1 27904573 1058522 75688..77355 1 NC_004545.1 COG1766; flagellar M-ring protein 77355 fliF 1058522 fliF Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar M-ring protein NP_777699.1 75688 D 224915 CDS NP_777700.1 27904574 1058544 77360..78322 1 NC_004545.1 COG1536; flagellar motor switch protein FliG 78322 fliG 1058544 fliG Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar motor switch protein FliG NP_777700.1 77360 D 224915 CDS NP_777701.1 27904575 1058258 78353..79030 1 NC_004545.1 COG1317; flagellar assembly protein FliH 79030 fliH 1058258 fliH Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar assembly protein FliH NP_777701.1 78353 D 224915 CDS NP_777702.1 27904576 1058209 79027..80391 1 NC_004545.1 COG1157; flagellum-specific ATP synthase 80391 fliI 1058209 fliI Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellum-specific ATP synthase NP_777702.1 79027 D 224915 CDS NP_777703.1 27904577 1058195 80408..80875 1 NC_004545.1 COG2882; flagellar FliJ protein 80875 fliJ 1058195 fliJ Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar FliJ protein NP_777703.1 80408 D 224915 CDS NP_777704.1 27904578 1058205 80868..81938 1 NC_004545.1 COG3144; flagellar FliK protein 81938 fliK 1058205 fliK Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar FliK protein NP_777704.1 80868 D 224915 CDS NP_777705.1 27904579 1058545 82082..83077 1 NC_004545.1 COG1868; flagellar motor switch protein FliM 83077 fliM 1058545 fliM Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar motor switch protein FliM NP_777705.1 82082 D 224915 CDS NP_777706.1 27904580 1058506 83070..83474 1 NC_004545.1 COG1886; flagellar motor switch protein FliN 83474 fliN 1058506 fliN Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar motor switch protein FliN NP_777706.1 83070 D 224915 CDS NP_777707.1 27904581 1058188 83536..84618 1 NC_004545.1 COG1338; bifunctional flagellar biosynthesis protein FliO/FliP 84618 fliOP 1058188 fliOP Buchnera aphidicola str. Bp (Baizongia pistaciae) bifunctional flagellar biosynthesis protein FliO/FliP NP_777707.1 83536 D 224915 CDS NP_777708.1 27904582 1058199 84702..84974 1 NC_004545.1 COG1987; flagellar biosynthetic protein MopD; flagellar biosynthetic protein FliQ 84974 fliQ 1058199 fliQ Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar biosynthetic protein FliQ NP_777708.1 84702 D 224915 CDS NP_777709.1 27904583 1058546 84974..85747 1 NC_004545.1 COG1684; flagellar biosynthetic protein MopE; flagellar biosynthetic protein FliR 85747 fliR 1058546 fliR Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar biosynthetic protein FliR NP_777709.1 84974 D 224915 CDS NP_777710.1 27904584 1058539 complement(86140..86307) 1 NC_004545.1 COG0267; 50S ribosomal protein L33 86307 rpmG 1058539 rpmG Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L33 NP_777710.1 86140 R 224915 CDS NP_777711.1 27904585 1058197 complement(86349..86573) 1 NC_004545.1 COG0227; 50S ribosomal protein L28 86573 rpmB 1058197 rpmB Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L28 NP_777711.1 86349 R 224915 CDS NP_777712.1 27904586 1058548 86752..88905 1 NC_004545.1 COG2911; RpoD protein 88905 ytfN 1058548 ytfN Buchnera aphidicola str. Bp (Baizongia pistaciae) RpoD protein NP_777712.1 86752 D 224915 CDS NP_777713.1 27904587 1058391 complement(89898..90425) 1 NC_004545.1 COG0221; pyrophosphate phospho-hydrolase; PPase; inorganic pyrophosphatase 90425 ppa 1058391 ppa Buchnera aphidicola str. Bp (Baizongia pistaciae) inorganic pyrophosphatase NP_777713.1 89898 R 224915 CDS NP_777714.1 27904588 1058549 90540..91886 1 NC_004545.1 COG0312; TldE protein; PmbA protein 91886 pmbA 1058549 pmbA Buchnera aphidicola str. Bp (Baizongia pistaciae) PmbA protein NP_777714.1 90540 D 224915 CDS NP_777715.1 27904589 1058200 complement(92362..93240) 1 NC_004545.1 COG0313; tetrapyrrole methylase 93240 yraL 1058200 yraL Buchnera aphidicola str. Bp (Baizongia pistaciae) tetrapyrrole methylase NP_777715.1 92362 R 224915 CDS NP_777716.1 27904590 1058210 93527..94750 1 NC_004545.1 COG0304; beta-ketoacyl-ACP synthase I; KAS I; 3-oxoacyl-ACP synthase 94750 fabB 1058210 fabB Buchnera aphidicola str. Bp (Baizongia pistaciae) 3-oxoacyl-ACP synthase NP_777716.1 93527 D 224915 CDS NP_777717.1 27904591 1058172 95374..96324 1 NC_004545.1 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase 96324 talA 1058172 talA Buchnera aphidicola str. Bp (Baizongia pistaciae) transaldolase NP_777717.1 95374 D 224915 CDS NP_777718.1 27904592 1058173 96422..98422 1 NC_004545.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 98422 tktB 1058173 tktB Buchnera aphidicola str. Bp (Baizongia pistaciae) transketolase NP_777718.1 96422 D 224915 CDS NP_777719.1 27904593 1058547 98589..99722 1 NC_004545.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 99722 dapE 1058547 dapE Buchnera aphidicola str. Bp (Baizongia pistaciae) succinyl-diaminopimelate desuccinylase NP_777719.1 98589 D 224915 CDS NP_777720.1 27904594 1058177 complement(100159..101043) 1 NC_004545.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 101043 dapA 1058177 dapA Buchnera aphidicola str. Bp (Baizongia pistaciae) dihydrodipicolinate synthase NP_777720.1 100159 R 224915 CDS NP_777721.1 27904595 1058553 complement(101526..102593) 1 NC_004545.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 102593 aroC 1058553 aroC Buchnera aphidicola str. Bp (Baizongia pistaciae) chorismate synthase NP_777721.1 101526 R 224915 CDS NP_777722.1 27904596 1058390 102976..103506 1 NC_004545.1 COG2840; hypothetical protein 103506 yb2331 1058390 yb2331 Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777722.1 102976 D 224915 CDS NP_777723.1 27904597 1058396 103996..104895 1 NC_004545.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 104895 hisG 1058396 hisG Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP phosphoribosyltransferase NP_777723.1 103996 D 224915 CDS NP_777724.1 27904598 1058171 104901..106208 1 NC_004545.1 COG0141; HDH; histidinol dehydrogenase 106208 hisD 1058171 hisD Buchnera aphidicola str. Bp (Baizongia pistaciae) histidinol dehydrogenase NP_777724.1 104901 D 224915 CDS NP_777725.1 27904599 1058203 106210..107292 1 NC_004545.1 COG0079; imidazole; histidinol-phosphate aminotransferase 107292 hisC 1058203 hisC Buchnera aphidicola str. Bp (Baizongia pistaciae) histidinol-phosphate aminotransferase NP_777725.1 106210 D 224915 CDS NP_777726.1 27904600 1058394 107294..108367 1 NC_004545.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 108367 hisB 1058394 hisB Buchnera aphidicola str. Bp (Baizongia pistaciae) imidazole glycerol-phosphate dehydratase/histidinol phosphatase NP_777726.1 107294 D 224915 CDS NP_777727.1 27904601 1058555 108368..108958 1 NC_004545.1 COG0118; amidotransferase HisH 108958 hisH 1058555 hisH Buchnera aphidicola str. Bp (Baizongia pistaciae) amidotransferase HisH NP_777727.1 108368 D 224915 CDS NP_777728.1 27904602 1058178 108962..109687 1 NC_004545.1 COG0106; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 109687 hisA 1058178 hisA Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase NP_777728.1 108962 D 224915 CDS NP_777729.1 27904603 1058204 109681..110457 1 NC_004545.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 110457 hisF 1058204 hisF Buchnera aphidicola str. Bp (Baizongia pistaciae) imidazole glycerol phosphate synthase subunit HisF NP_777729.1 109681 D 224915 CDS NP_777730.1 27904604 1058395 110451..111071 1 NC_004545.1 COG0139; COG0140; histidine biosynthesis bifunctional protein HisIE; PRA-CH; PRA-PH; phosphoribosyl-AMP cyclohydrolase 111071 hisI 1058395 hisI Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphoribosyl-AMP cyclohydrolase NP_777730.1 110451 D 224915 CDS NP_777731.1 27904605 1058155 111225..112631 1 NC_004545.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 112631 gnd 1058155 gnd Buchnera aphidicola str. Bp (Baizongia pistaciae) 6-phosphogluconate dehydrogenase NP_777731.1 111225 D 224915 CDS NP_777732.1 27904606 1058552 112936..113517 1 NC_004545.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 113517 dcd 1058552 dcd Buchnera aphidicola str. Bp (Baizongia pistaciae) deoxycytidine triphosphate deaminase NP_777732.1 112936 D 224915 CDS NP_777733.1 27904607 1058207 113619..115256 1 NC_004545.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 115256 metG 1058207 metG Buchnera aphidicola str. Bp (Baizongia pistaciae) methionyl-tRNA synthetase NP_777733.1 113619 D 224915 CDS NP_777734.1 27904608 1058556 complement(115306..116622) 1 NC_004545.1 COG0037; cell cycle protein MesJ 116622 mesJ 1058556 mesJ Buchnera aphidicola str. Bp (Baizongia pistaciae) cell cycle protein MesJ NP_777734.1 115306 R 224915 CDS NP_777735.1 27904609 1058557 complement(116861..118216) 1 NC_004545.1 COG0534; Na+ drug antiporter; multidrug-efflux transporter; multidrug resistance protein NorM 118216 norM 1058557 norM Buchnera aphidicola str. Bp (Baizongia pistaciae) multidrug resistance protein NorM NP_777735.1 116861 R 224915 CDS NP_777736.1 27904610 1058211 118530..119168 1 NC_004545.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 119168 ribE 1058211 ribE Buchnera aphidicola str. Bp (Baizongia pistaciae) riboflavin synthase subunit alpha NP_777736.1 118530 D 224915 CDS NP_777737.1 27904611 1058393 119467..120051 1 NC_004545.1 COG2209; nitrogen fixation protein RnfA; electron transport complex protein RnfA 120051 rnfA 1058393 rnfA Buchnera aphidicola str. Bp (Baizongia pistaciae) electron transport complex protein RnfA NP_777737.1 119467 D 224915 CDS NP_777738.1 27904612 1058376 120063..120572 1 NC_004545.1 COG2878; electron transport complex protein RnfB 120572 rnfB 1058376 rnfB Buchnera aphidicola str. Bp (Baizongia pistaciae) electron transport complex protein RnfB NP_777738.1 120063 D 224915 CDS NP_777739.1 27904613 1058558 120590..122107 1 NC_004545.1 COG1726; electron transport complex protein RnfC 122107 rnfC 1058558 rnfC Buchnera aphidicola str. Bp (Baizongia pistaciae) electron transport complex protein RnfC NP_777739.1 120590 D 224915 CDS NP_777740.1 27904614 1058170 122275..123339 1 NC_004545.1 COG1805; nitrogen fixation protein RnfD; electron transport complex protein RnfD 123339 rnfD 1058170 rnfD Buchnera aphidicola str. Bp (Baizongia pistaciae) electron transport complex protein RnfD NP_777740.1 122275 D 224915 CDS NP_777741.1 27904615 1058196 123323..123973 1 NC_004545.1 COG2869; Nitrogen fixation protein RnfG; electron transport complex protein RnfG 123973 rnfG 1058196 rnfG Buchnera aphidicola str. Bp (Baizongia pistaciae) electron transport complex protein RnfG NP_777741.1 123323 D 224915 CDS NP_777742.1 27904616 1058158 123966..124691 1 NC_004545.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex RsxE subunit 124691 ydgQ 1058158 ydgQ Buchnera aphidicola str. Bp (Baizongia pistaciae) electron transport complex RsxE subunit NP_777742.1 123966 D 224915 CDS NP_777743.1 27904617 1058503 124654..125301 1 NC_004545.1 COG0177; endonuclease III 125301 nth 1058503 nth Buchnera aphidicola str. Bp (Baizongia pistaciae) endonuclease III NP_777743.1 124654 D 224915 CDS NP_777744.1 27904618 1058154 125590..126864 1 NC_004545.1 COG0162; tyrosine-tRNA ligase; TyrRS; tyrosyl-tRNA synthetase 126864 tyrS 1058154 tyrS Buchnera aphidicola str. Bp (Baizongia pistaciae) tyrosyl-tRNA synthetase NP_777744.1 125590 D 224915 CDS NP_777745.1 27904619 1058397 complement(126931..127317) 1 NC_004545.1 COG0316; hypothetical protein 127317 ydiC 1058397 ydiC Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777745.1 126931 R 224915 CDS NP_777746.1 27904620 1058517 127799..128905 1 NC_004545.1 YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; inner membrane protein 128905 yb1688 1058517 yb1688 Buchnera aphidicola str. Bp (Baizongia pistaciae) inner membrane protein NP_777746.1 127799 D 224915 CDS NP_777747.1 27904621 1058216 129441..130487 1 NC_004545.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 130487 aroH 1058216 aroH Buchnera aphidicola str. Bp (Baizongia pistaciae) phospho-2-dehydro-3-deoxyheptonate aldolase NP_777747.1 129441 D 224915 CDS NP_777748.1 27904622 1058223 130663..132594 1 NC_004545.1 COG0441; threonine-tRNA ligase; ThrRS; threonyl-tRNA synthetase 132594 thrS 1058223 thrS Buchnera aphidicola str. Bp (Baizongia pistaciae) threonyl-tRNA synthetase NP_777748.1 130663 D 224915 CDS NP_777749.1 27904623 1058559 132598..133143 1 NC_004545.1 COG0290; translation initiation factor IF-3 133143 infC 1058559 infC Buchnera aphidicola str. Bp (Baizongia pistaciae) translation initiation factor IF-3 NP_777749.1 132598 D 224915 CDS NP_777750.1 27904624 1058571 133189..133386 1 NC_004545.1 COG0291; ribosomal protein A; 50S ribosomal protein L35 133386 rpmI 1058571 rpmI Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L35 NP_777750.1 133189 D 224915 CDS NP_777751.1 27904625 1058215 133429..133809 1 NC_004545.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 133809 rplT 1058215 rplT Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L20 NP_777751.1 133429 D 224915 CDS NP_777752.1 27904626 1058469 133982..134968 1 NC_004545.1 COG0016; phenylalanine-tRNA ligase alpha chain; PheRS; phenylalanyl-tRNA synthetase alpha chain 134968 pheS 1058469 pheS Buchnera aphidicola str. Bp (Baizongia pistaciae) phenylalanyl-tRNA synthetase alpha chain NP_777752.1 133982 D 224915 CDS NP_777753.1 27904627 1058510 134983..137391 1 NC_004545.1 COG0073; COG0072; phenylalanine-tRNA ligase beta chain; PheRS; phenylalanyl-tRNA synthetase beta chain 137391 pheT 1058510 pheT Buchnera aphidicola str. Bp (Baizongia pistaciae) phenylalanyl-tRNA synthetase beta chain NP_777753.1 134983 D 224915 CDS NP_777754.1 27904628 1058467 137603..137950 1 NC_004545.1 COG1862; membrane protein YajC 137950 yajC 1058467 yajC Buchnera aphidicola str. Bp (Baizongia pistaciae) membrane protein YajC NP_777754.1 137603 D 224915 CDS NP_777755.1 27904629 1058157 complement(138135..140228) 1 NC_004545.1 COG0751; glycyl-tRNA synthetase beta chain (glycine--tRNA ligase beta chain) (GlyRS) 140228 glyS 1058157 glyS Buchnera aphidicola str. Bp (Baizongia pistaciae) glycyl-tRNA synthetase beta chain (glycine--tRNA ligase beta chain) (GlyRS) NP_777755.1 138135 R 224915 CDS NP_777756.1 27904630 1058130 complement(140274..141176) 1 NC_004545.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 141176 glyQ 1058130 glyQ Buchnera aphidicola str. Bp (Baizongia pistaciae) glycyl-tRNA synthetase subunit alpha NP_777756.1 140274 R 224915 CDS NP_777757.1 27904631 1058127 141478..142314 1 NC_004545.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 142314 nfo 1058127 nfo Buchnera aphidicola str. Bp (Baizongia pistaciae) endonuclease IV NP_777757.1 141478 D 224915 CDS NP_777758.1 27904632 1058398 142440..142733 1 NC_004545.1 COG1825; 50S ribosomal protein L25 142733 rplY 1058398 rplY Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L25 NP_777758.1 142440 D 224915 CDS NP_777759.1 27904633 1058212 complement(142971..143744) 1 NC_004545.1 COG0586; DedA family membrane protein 143744 yabI 1058212 yabI Buchnera aphidicola str. Bp (Baizongia pistaciae) DedA family membrane protein NP_777759.1 142971 R 224915 CDS NP_777760.1 27904634 1058213 144271..145053 1 NC_004545.1 COG0030; S-adenosylmethionine-6-N', N'-adenosyl rRNA dimethyltransferase; 16S rRNA dimethylase; high level kasugamycin resistance protein ksgA; kasugamycin dimethyltransferase; dimethyladenosine transferase 145053 ksgA 1058213 ksgA Buchnera aphidicola str. Bp (Baizongia pistaciae) dimethyladenosine transferase NP_777760.1 144271 D 224915 CDS NP_777761.1 27904635 1058166 145169..146005 1 NC_004545.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 146005 apaH 1058166 apaH Buchnera aphidicola str. Bp (Baizongia pistaciae) diadenosine tetraphosphatase NP_777761.1 145169 D 224915 CDS NP_777762.1 27904636 1058169 complement(146011..146505) 1 NC_004545.1 COG0262; dihydrofolate reductase 146505 folA 1058169 folA Buchnera aphidicola str. Bp (Baizongia pistaciae) dihydrofolate reductase NP_777762.1 146011 R 224915 CDS NP_777763.1 27904637 1058381 complement(146590..149820) 1 NC_004545.1 COG0458; carbamoyl- phosphate synthase (ammonia); carbamoyl-phosphate synthetase (ammonia); carbamoyl-phosphate synthetase I; carbon-dioxide-ammonia ligase; CARB; carbamoyl phosphate synthetase large chain 149820 carB 1058381 carB Buchnera aphidicola str. Bp (Baizongia pistaciae) carbamoyl phosphate synthetase large chain NP_777763.1 146590 R 224915 CDS NP_777764.1 27904638 1058148 complement(149829..151022) 1 NC_004545.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 151022 carA 1058148 carA Buchnera aphidicola str. Bp (Baizongia pistaciae) carbamoyl phosphate synthase small subunit NP_777764.1 149829 R 224915 CDS NP_777765.1 27904639 1058206 complement(151161..151979) 1 NC_004545.1 COG0289; DHPR; dihydrodipicolinate reductase 151979 dapB 1058206 dapB Buchnera aphidicola str. Bp (Baizongia pistaciae) dihydrodipicolinate reductase NP_777765.1 151161 R 224915 CDS NP_777766.1 27904640 1058554 complement(152274..152939) 1 NC_004545.1 COG0761; LytB protein 152939 lytB 1058554 lytB Buchnera aphidicola str. Bp (Baizongia pistaciae) LytB protein NP_777766.1 152274 R 224915 CDS NP_777767.1 27904641 1058168 complement(152995..153486) 1 NC_004545.1 COG0597; prolipoprotein signal peptidase; signal peptidase II; SPase II; lipoprotein signal peptidase 153486 lspA 1058168 lspA Buchnera aphidicola str. Bp (Baizongia pistaciae) lipoprotein signal peptidase NP_777767.1 152995 R 224915 CDS NP_777768.1 27904642 1058147 complement(153486..156305) 1 NC_004545.1 COG0060; isoleucine-tRNA ligase; IleRS; isoleucyl-tRNA synthetase 156305 ileS 1058147 ileS Buchnera aphidicola str. Bp (Baizongia pistaciae) isoleucyl-tRNA synthetase NP_777768.1 153486 R 224915 CDS NP_777769.1 27904643 1058225 156975..157235 1 NC_004545.1 COG0268; 30S ribosomal protein S20 157235 rpsT 1058225 rpsT Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S20 NP_777769.1 156975 D 224915 CDS NP_777770.1 27904644 1058563 complement(157317..158468) 1 NC_004545.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 158468 dnaJ 1058563 dnaJ Buchnera aphidicola str. Bp (Baizongia pistaciae) molecular chaperone DnaJ NP_777770.1 157317 R 224915 CDS NP_777771.1 27904645 1058565 complement(158590..160506) 1 NC_004545.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 160506 dnaK 1058565 dnaK Buchnera aphidicola str. Bp (Baizongia pistaciae) molecular chaperone DnaK NP_777771.1 158590 R 224915 CDS NP_777772.1 27904646 1058564 160780..161178 1 NC_004545.1 COG0838; NADH-ubiquinone oxidoreductase chain A; Nuo1; NADH dehydrogenase I chain A 161178 nuoA 1058564 nuoA Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase I chain A NP_777772.1 160780 D 224915 CDS NP_777773.1 27904647 1058400 161204..161872 1 NC_004545.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 161872 nuoB 1058400 nuoB Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase subunit B NP_777773.1 161204 D 224915 CDS NP_777774.1 27904648 1058218 161977..163770 1 NC_004545.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 163770 nuoCD 1058218 nuoCD Buchnera aphidicola str. Bp (Baizongia pistaciae) bifunctional NADH:ubiquinone oxidoreductase subunit C/D NP_777774.1 161977 D 224915 CDS NP_777775.1 27904649 1058224 163757..164272 1 NC_004545.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 164272 nuoE 1058224 nuoE Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase subunit E NP_777775.1 163757 D 224915 CDS NP_777776.1 27904650 1058163 164269..165603 1 NC_004545.1 COG1894; NADH-ubiquinone oxidoreductase chain 6; Nuo6; NADH dehydrogenase I chain F 165603 nuoF 1058163 nuoF Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase I chain F NP_777776.1 164269 D 224915 CDS NP_777777.1 27904651 1058511 165732..168455 1 NC_004545.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 168455 nuoG 1058511 nuoG Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase subunit G NP_777777.1 165732 D 224915 CDS NP_777778.1 27904652 1058116 168452..169420 1 NC_004545.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 169420 nuoH 1058116 nuoH Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase subunit H NP_777778.1 168452 D 224915 CDS NP_777779.1 27904653 1058167 169443..169985 1 NC_004545.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 169985 nuoI 1058167 nuoI Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase subunit I NP_777779.1 169443 D 224915 CDS NP_777780.1 27904654 1058217 169996..170490 1 NC_004545.1 COG0839; NADH-ubiquinone oxidoreductase chain J; Nuo10; NADH dehydrogenase I chain J 170490 nuoJ 1058217 nuoJ Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase I chain J NP_777780.1 169996 D 224915 CDS NP_777781.1 27904655 1058164 170548..170850 1 NC_004545.1 COG0713; NADH-ubiquinone oxidoreductase chain K; Nuo11; NADH dehydrogenase I chain K 170850 nuoK 1058164 nuoK Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase I chain K NP_777781.1 170548 D 224915 CDS NP_777782.1 27904656 1058569 170847..172712 1 NC_004545.1 COG1009; NADH-ubiquinone oxidoreductase chain L; Nuo12; NADH dehydrogenase I chain L 172712 nuoL 1058569 nuoL Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase I chain L NP_777782.1 170847 D 224915 CDS NP_777783.1 27904657 1058165 172823..174349 1 NC_004545.1 COG1008; NADH dehydrogenase subunit 4 174349 nuoM 1058165 nuoM Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase subunit 4 NP_777783.1 172823 D 224915 CDS NP_777784.1 27904658 1058222 174371..175855 1 NC_004545.1 COG1007; NADH dehydrogenase (ubiquinone); ubiquinone reductase; type I dehydrogenase; complex I dehydrogenase; NADH dehydrogenase subunit 2 175855 nuoN 1058222 nuoN Buchnera aphidicola str. Bp (Baizongia pistaciae) NADH dehydrogenase subunit 2 NP_777784.1 174371 D 224915 CDS NP_777785.1 27904659 1058561 175946..176911 1 NC_004545.1 COG0861; transport protein 176911 ygjT 1058561 ygjT Buchnera aphidicola str. Bp (Baizongia pistaciae) transport protein NP_777785.1 175946 D 224915 CDS NP_777786.1 27904660 1058567 176994..178274 1 NC_004545.1 COG0285; FolC bifunctional protein; folylpoly-gamma-glutamate synthetase; FPGS; folylpolyglutamate synthase 178274 folC 1058567 folC Buchnera aphidicola str. Bp (Baizongia pistaciae) folylpolyglutamate synthase NP_777786.1 176994 D 224915 CDS NP_777787.1 27904661 1058399 178315..178800 1 NC_004545.1 COG1286; colicin V production-like protein 178800 cvpA 1058399 cvpA Buchnera aphidicola str. Bp (Baizongia pistaciae) colicin V production-like protein NP_777787.1 178315 D 224915 CDS NP_777788.1 27904662 1058575 complement(178982..179929) 1 NC_004545.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 179929 prsA 1058575 prsA Buchnera aphidicola str. Bp (Baizongia pistaciae) ribose-phosphate pyrophosphokinase NP_777788.1 178982 R 224915 CDS NP_777789.1 27904663 1058129 181702..182790 1 NC_004545.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 182790 prfA 1058129 prfA Buchnera aphidicola str. Bp (Baizongia pistaciae) peptide chain release factor 1 NP_777789.1 181702 D 224915 CDS NP_777790.1 27904664 1058149 182787..183620 1 NC_004545.1 COG2890; M.BusHemKP; hypothetical protein 183620 hemK 1058149 hemK Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777790.1 182787 D 224915 CDS NP_777791.1 27904665 1058220 183795..184604 1 NC_004545.1 COG2912; transcriptional regulator 184604 ychA 1058220 ychA Buchnera aphidicola str. Bp (Baizongia pistaciae) transcriptional regulator NP_777791.1 183795 D 224915 CDS NP_777792.1 27904666 1058568 185121..186323 1 NC_004545.1 COG0282; Acetokinase; acetate kinase 186323 ackA 1058568 ackA Buchnera aphidicola str. Bp (Baizongia pistaciae) acetate kinase NP_777792.1 185121 D 224915 CDS NP_777793.1 27904667 1058580 186377..188524 1 NC_004545.1 COG0857; COG0280; phosphotransacetylase; phosphate acetyltransferase 188524 pta 1058580 pta Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphate acetyltransferase NP_777793.1 186377 D 224915 CDS NP_777794.1 27904668 1058146 complement(188615..188878) 1 NC_004545.1 COG0633; ferredoxin; iron-sulphur binding protein 188878 yfaE 1058146 yfaE Buchnera aphidicola str. Bp (Baizongia pistaciae) iron-sulphur binding protein NP_777794.1 188615 R 224915 CDS NP_777795.1 27904669 1058229 complement(188879..190009) 1 NC_004545.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 190009 nrdB 1058229 nrdB Buchnera aphidicola str. Bp (Baizongia pistaciae) ribonucleotide-diphosphate reductase subunit beta NP_777795.1 188879 R 224915 CDS NP_777796.1 27904670 1058219 complement(190074..192359) 1 NC_004545.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 192359 nrdA 1058219 nrdA Buchnera aphidicola str. Bp (Baizongia pistaciae) ribonucleotide-diphosphate reductase subunit alpha NP_777796.1 190074 R 224915 CDS NP_777797.1 27904671 1058401 complement(192634..195177) 1 NC_004545.1 COG0188; DNA gyrase subunit A 195177 gyrA 1058401 gyrA Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA gyrase subunit A NP_777797.1 192634 R 224915 CDS NP_777798.1 27904672 1058576 195718..196557 1 NC_004545.1 COG3416; hypothetical protein 196557 yba2 1058576 yba2 Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777798.1 195718 D 224915 CDS NP_777799.1 27904673 1058162 complement(196716..197315) 1 NC_004545.1 COG0450; thioredoxin peroxidase 1; thioredoxin-dependent peroxide reductase 1; thiol-specific antioxidant protein; TSA; PRP; natural killer cell enhancing factor B; NKEF-B; peroxiredoxin 2 197315 ahpC 1058162 ahpC Buchnera aphidicola str. Bp (Baizongia pistaciae) peroxiredoxin 2 NP_777799.1 196716 R 224915 CDS NP_777800.1 27904674 1058231 197551..198225 1 NC_004545.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 198225 ung 1058231 ung Buchnera aphidicola str. Bp (Baizongia pistaciae) uracil-DNA glycosylase NP_777800.1 197551 D 224915 CDS NP_777801.1 27904675 1058221 complement(198306..198890) 1 NC_004545.1 COG0576; Hsp-70 cofactor 2; heat shock protein GrpE 198890 grpE 1058221 grpE Buchnera aphidicola str. Bp (Baizongia pistaciae) heat shock protein GrpE NP_777801.1 198306 R 224915 CDS NP_777802.1 27904676 1058228 199004..199882 1 NC_004545.1 COG0061; poly(P)/ATP NAD kinase; inorganic polyphosphate/ATP-NAD kinase 199882 ppnK 1058228 ppnK Buchnera aphidicola str. Bp (Baizongia pistaciae) inorganic polyphosphate/ATP-NAD kinase NP_777802.1 199004 D 224915 CDS NP_777803.1 27904677 1058138 200435..200761 1 NC_004545.1 COG0278; thioredoxin-like protein 2 200761 ydhD 1058138 ydhD Buchnera aphidicola str. Bp (Baizongia pistaciae) thioredoxin-like protein 2 NP_777803.1 200435 D 224915 CDS NP_777804.1 27904678 1058161 complement(200826..201479) 1 NC_004545.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 201479 rnt 1058161 rnt Buchnera aphidicola str. Bp (Baizongia pistaciae) ribonuclease T NP_777804.1 200826 R 224915 CDS NP_777805.1 27904679 1058464 201679..202305 1 NC_004545.1 COG0605; superoxide dismutase SodA; superoxide dismutase 202305 sodA 1058464 sodA Buchnera aphidicola str. Bp (Baizongia pistaciae) superoxide dismutase NP_777805.1 201679 D 224915 CDS NP_777806.1 27904680 1058578 202401..203024 1 NC_004545.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 203024 pth 1058578 pth Buchnera aphidicola str. Bp (Baizongia pistaciae) peptidyl-tRNA hydrolase NP_777806.1 202401 D 224915 CDS NP_777807.1 27904681 1058574 203069..204160 1 NC_004545.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 204160 ychF 1058574 ychF Buchnera aphidicola str. Bp (Baizongia pistaciae) GTP-dependent nucleic acid-binding protein EngD NP_777807.1 203069 D 224915 CDS NP_777808.1 27904682 1058160 complement(204244..205536) 1 NC_004545.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 205536 thrC 1058160 thrC Buchnera aphidicola str. Bp (Baizongia pistaciae) threonine synthase NP_777808.1 204244 R 224915 CDS NP_777809.1 27904683 1058383 complement(205537..206469) 1 NC_004545.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 206469 thrB 1058383 thrB Buchnera aphidicola str. Bp (Baizongia pistaciae) homoserine kinase NP_777809.1 205537 R 224915 CDS NP_777810.1 27904684 1058230 complement(206489..208939) 1 NC_004545.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homeserine dehydrogenase I 208939 thrA 1058230 thrA Buchnera aphidicola str. Bp (Baizongia pistaciae) bifunctional aspartokinase I/homeserine dehydrogenase I NP_777810.1 206489 R 224915 CDS NP_777811.1 27904685 1058581 complement(209657..210112) 1 NC_004545.1 COG1734; DnaK suppressor protein 210112 dksA 1058581 dksA Buchnera aphidicola str. Bp (Baizongia pistaciae) DnaK suppressor protein NP_777811.1 209657 R 224915 CDS NP_777812.1 27904686 1058577 210481..211275 1 NC_004545.1 COG0101; tRNA pseudouridine synthase A 211275 truA 1058577 truA Buchnera aphidicola str. Bp (Baizongia pistaciae) tRNA pseudouridine synthase A NP_777812.1 210481 D 224915 CDS NP_777813.1 27904687 1058232 211524..213749 1 NC_004545.1 bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; penicillin-binding protein 1b 213749 mrcB 1058232 mrcB Buchnera aphidicola str. Bp (Baizongia pistaciae) penicillin-binding protein 1b NP_777813.1 211524 D 224915 CDS NP_777814.1 27904688 1058579 214226..216778 1 NC_004545.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 216778 secA 1058579 secA Buchnera aphidicola str. Bp (Baizongia pistaciae) preprotein translocase subunit SecA NP_777814.1 214226 D 224915 CDS NP_777815.1 27904689 1058572 217697..218752 1 NC_004545.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 218752 guaC 1058572 guaC Buchnera aphidicola str. Bp (Baizongia pistaciae) guanosine 5'-monophosphate oxidoreductase NP_777815.1 217697 D 224915 CDS NP_777816.1 27904690 1058233 219162..221825 1 NC_004545.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 221825 aceE 1058233 aceE Buchnera aphidicola str. Bp (Baizongia pistaciae) pyruvate dehydrogenase subunit E1 NP_777816.1 219162 D 224915 CDS NP_777817.1 27904691 1058122 221836..223086 1 NC_004545.1 COG0508; E2; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 223086 aceF 1058122 aceF Buchnera aphidicola str. Bp (Baizongia pistaciae) dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex NP_777817.1 221836 D 224915 CDS NP_777818.1 27904692 1058236 223234..224661 1 NC_004545.1 COG1249; lipoamide reductase [NADH]; E3 component of alpha-ketoacid dehydrogenase complexes; lipoyl dehydrogenase; dihydrolipoyl dehydrogenase; diaphorase; dihydrolipoamide dehydrogenase 224661 lpdA 1058236 lpdA Buchnera aphidicola str. Bp (Baizongia pistaciae) dihydrolipoamide dehydrogenase NP_777818.1 223234 D 224915 CDS NP_777819.1 27904693 1058386 complement(224733..225491) 1 NC_004545.1 COG0775; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 225491 pfs 1058386 pfs Buchnera aphidicola str. Bp (Baizongia pistaciae) 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase NP_777819.1 224733 R 224915 CDS NP_777820.1 27904694 1058133 complement(225530..225877) 1 NC_004545.1 COG0316; HesB/YadR/YfhF family protein 225877 yadR 1058133 yadR Buchnera aphidicola str. Bp (Baizongia pistaciae) HesB/YadR/YfhF family protein NP_777820.1 225530 R 224915 CDS NP_777821.1 27904695 1058227 complement(225983..227140) 1 NC_004545.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 227140 ftsZ 1058227 ftsZ Buchnera aphidicola str. Bp (Baizongia pistaciae) cell division protein FtsZ NP_777821.1 225983 R 224915 CDS NP_777822.1 27904696 1058403 complement(227173..228438) 1 NC_004545.1 COG0849; cell division protein FtsA 228438 ftsA 1058403 ftsA Buchnera aphidicola str. Bp (Baizongia pistaciae) cell division protein FtsA NP_777822.1 227173 R 224915 CDS NP_777823.1 27904697 1058244 complement(228840..229769) 1 NC_004545.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 229769 ddl 1058244 ddl Buchnera aphidicola str. Bp (Baizongia pistaciae) D-alanine--D-alanine ligase NP_777823.1 228840 R 224915 CDS NP_777824.1 27904698 1058586 complement(229771..231231) 1 NC_004545.1 COG0773; UDP-N-acetylmuramoyl-L-alanine synthetase; UDP-N-acetylmuramate-alanine ligase 231231 murC 1058586 murC Buchnera aphidicola str. Bp (Baizongia pistaciae) UDP-N-acetylmuramate-alanine ligase NP_777824.1 229771 R 224915 CDS NP_777825.1 27904699 1058159 complement(231269..232330) 1 NC_004545.1 COG0707; undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; UDP-N-acetylglucosamine-N-acetylmuramyl- pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 232330 murG 1058159 murG Buchnera aphidicola str. Bp (Baizongia pistaciae) UDP-N-acetylglucosamine-N-acetylmuramyl- pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase NP_777825.1 231269 R 224915 CDS NP_777826.1 27904700 1058134 complement(232327..233469) 1 NC_004545.1 COG0772; cell division protein FtsW 233469 ftsW 1058134 ftsW Buchnera aphidicola str. Bp (Baizongia pistaciae) cell division protein FtsW NP_777826.1 232327 R 224915 CDS NP_777827.1 27904701 1058151 complement(233524..234852) 1 NC_004545.1 COG0771; UDP-N- acetylmuramoyl-L-alanyl-D-glutamate synthetase; D-glutamic acid adding enzyme; UDP-N-acetylmuramoylalanine-D-glutamate ligase 234852 murD 1058151 murD Buchnera aphidicola str. Bp (Baizongia pistaciae) UDP-N-acetylmuramoylalanine-D-glutamate ligase NP_777827.1 233524 R 224915 CDS NP_777828.1 27904702 1058582 complement(234849..235871) 1 NC_004545.1 COG0472; UDP-MurNAc-pentapeptide phosphotransferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 235871 mraY 1058582 mraY Buchnera aphidicola str. Bp (Baizongia pistaciae) phospho-N-acetylmuramoyl-pentapeptide- transferase NP_777828.1 234849 R 224915 CDS NP_777829.1 27904703 1058402 complement(235938..237320) 1 NC_004545.1 COG0770; UDP-MurNAc-pentapeptide synthetase; D-alanyl-D-alanine-adding enzyme; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D- alanyl ligase 237320 murF 1058402 murF Buchnera aphidicola str. Bp (Baizongia pistaciae) UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D- alanyl ligase NP_777829.1 235938 R 224915 CDS NP_777830.1 27904704 1058584 complement(237307..238833) 1 NC_004545.1 COG0769; UDP-N-acetylmuramyl-tripeptide synthetase; meso-diaminopimelate-adding enzyme; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase 238833 murE 1058584 murE Buchnera aphidicola str. Bp (Baizongia pistaciae) UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase NP_777830.1 237307 R 224915 CDS NP_777831.1 27904705 1058119 complement(238874..240604) 1 NC_004545.1 COG0768; penicillin-binding protein 3; PBP-3; peptidoglycan synthetase FtsI 240604 ftsI 1058119 ftsI Buchnera aphidicola str. Bp (Baizongia pistaciae) peptidoglycan synthetase FtsI NP_777831.1 238874 R 224915 CDS NP_777832.1 27904706 1058356 complement(240687..240938) 1 NC_004545.1 COG3116; cell division protein FtsL-like protein 240938 ftsL 1058356 ftsL Buchnera aphidicola str. Bp (Baizongia pistaciae) cell division protein FtsL-like protein NP_777832.1 240687 R 224915 CDS NP_777833.1 27904707 1058405 complement(240931..241878) 1 NC_004545.1 COG0275; methyltransferase; hypothetical protein 241878 yabC 1058405 yabC Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777833.1 240931 R 224915 CDS NP_777834.1 27904708 1058234 complement(241972..242451) 1 NC_004545.1 COG0440; AHAS; acetohydroxy-acid synthase small subunit; ALS; acetolactate synthase small subunit 242451 ilvH 1058234 ilvH Buchnera aphidicola str. Bp (Baizongia pistaciae) acetolactate synthase small subunit NP_777834.1 241972 R 224915 CDS NP_777835.1 27904709 1058120 complement(242448..244178) 1 NC_004545.1 COG0028; AHAS; acetohydroxy-acid synthase large subunit; ALS; acetolactate synthase large subunit 244178 ilvI 1058120 ilvI Buchnera aphidicola str. Bp (Baizongia pistaciae) acetolactate synthase large subunit NP_777835.1 242448 R 224915 CDS NP_777836.1 27904710 1058407 complement(244469..245494) 1 NC_004545.1 COG1477; thiamine biosynthesis protein ApbE precursor 245494 apbE 1058407 apbE Buchnera aphidicola str. Bp (Baizongia pistaciae) thiamine biosynthesis protein ApbE precursor NP_777836.1 244469 R 224915 CDS NP_777837.1 27904711 1058427 245995..247392 1 NC_004545.1 COG0265; protease DO; serine protease 247392 htrA 1058427 htrA Buchnera aphidicola str. Bp (Baizongia pistaciae) serine protease NP_777837.1 245995 D 224915 CDS NP_777838.1 27904712 1058504 complement(247523..248347) 1 NC_004545.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 248347 dapD 1058504 dapD Buchnera aphidicola str. Bp (Baizongia pistaciae) 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase NP_777838.1 247523 R 224915 CDS NP_777839.1 27904713 1058483 complement(248425..249225) 1 NC_004545.1 COG0024; MAP; peptidase M; methionine aminopeptidase 249225 map 1058483 map Buchnera aphidicola str. Bp (Baizongia pistaciae) methionine aminopeptidase NP_777839.1 248425 R 224915 CDS NP_777840.1 27904714 1058237 249579..250265 1 NC_004545.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 250265 rpsB 1058237 rpsB Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S2 NP_777840.1 249579 D 224915 CDS NP_777841.1 27904715 1058435 250352..251152 1 NC_004545.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 251152 tsf 1058435 tsf Buchnera aphidicola str. Bp (Baizongia pistaciae) elongation factor Ts NP_777841.1 250352 D 224915 CDS NP_777842.1 27904716 1058121 251299..252027 1 NC_004545.1 COG0528; UK; uridine monophosphate kinase; UMP kinase; SMBA protein; uridylate kinase 252027 pyrH 1058121 pyrH Buchnera aphidicola str. Bp (Baizongia pistaciae) uridylate kinase NP_777842.1 251299 D 224915 CDS NP_777843.1 27904717 1058153 252164..252715 1 NC_004545.1 COG0233; ribosome releasing factor; RRF; ribosome recycling factor 252715 frr 1058153 frr Buchnera aphidicola str. Bp (Baizongia pistaciae) ribosome recycling factor NP_777843.1 252164 D 224915 CDS NP_777844.1 27904718 1058458 253985..254740 1 NC_004545.1 COG0020; UPP synthetase; di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase; UDS; undecaprenyl pyrophosphate synthetase 254740 uppS 1058458 uppS Buchnera aphidicola str. Bp (Baizongia pistaciae) undecaprenyl pyrophosphate synthetase NP_777844.1 253985 D 224915 CDS NP_777845.1 27904719 1058587 255146..255598 1 NC_004545.1 COG0764; (3R)-hydroxymyristoyl ACP dehydrase; (3R)-hydroxymyristoyl-ACP dehydratase 255598 fabZ 1058587 fabZ Buchnera aphidicola str. Bp (Baizongia pistaciae) (3R)-hydroxymyristoyl-ACP dehydratase NP_777845.1 255146 D 224915 CDS NP_777846.1 27904720 1058588 255887..259120 1 NC_004545.1 COG0587; DNA polymerase III alpha subunit 259120 dnaE 1058588 dnaE Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA polymerase III alpha subunit NP_777846.1 255887 D 224915 CDS NP_777847.1 27904721 1058404 complement(259265..260989) 1 NC_004545.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 260989 proS 1058404 proS Buchnera aphidicola str. Bp (Baizongia pistaciae) prolyl-tRNA synthetase NP_777847.1 259265 R 224915 CDS NP_777848.1 27904722 1058470 261394..262542 1 NC_004545.1 COG1377; flagellar biosynthetic protein FlhB 262542 flhB 1058470 flhB Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar biosynthetic protein FlhB NP_777848.1 261394 D 224915 CDS NP_777849.1 27904723 1058238 262535..264643 1 NC_004545.1 COG1298; flagellar biosynthesis protein FlhA 264643 flhA 1058238 flhA Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar biosynthesis protein FlhA NP_777849.1 262535 D 224915 CDS NP_777850.1 27904724 1058239 complement(264814..266550) 1 NC_004545.1 COG0018; arginine-tRNA ligase; ARGRS; arginyl-tRNA synthetase 266550 argS 1058239 argS Buchnera aphidicola str. Bp (Baizongia pistaciae) arginyl-tRNA synthetase NP_777850.1 264814 R 224915 CDS NP_777851.1 27904725 1058583 complement(268750..269499) 1 NC_004545.1 COG0491; glyoxalase II; Glx II; hydroxyacylglutathione hydrolase 269499 gloB 1058583 gloB Buchnera aphidicola str. Bp (Baizongia pistaciae) hydroxyacylglutathione hydrolase NP_777851.1 268750 R 224915 CDS NP_777852.1 27904726 1058471 complement(269553..270014) 1 NC_004545.1 COG0328; RNase HI; ribonuclease H; RNase H; ribonuclease HI 270014 rnhA 1058471 rnhA Buchnera aphidicola str. Bp (Baizongia pistaciae) ribonuclease HI NP_777852.1 269553 R 224915 CDS NP_777853.1 27904727 1058477 270064..270801 1 NC_004545.1 COG0847; DNA polymerase III epsilon chain 270801 dnaQ 1058477 dnaQ Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA polymerase III epsilon chain NP_777853.1 270064 D 224915 CDS NP_777854.1 27904728 1058241 271229..271690 1 NC_004545.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 271690 gpt 1058241 gpt Buchnera aphidicola str. Bp (Baizongia pistaciae) xanthine-guanine phosphoribosyltransferase NP_777854.1 271229 D 224915 CDS NP_777855.1 27904729 1058235 271815..272411 1 NC_004545.1 COG0576; HSP-70 cofactor; heat shock protein GrpE 272411 grpE1 1058235 grpE1 Buchnera aphidicola str. Bp (Baizongia pistaciae) heat shock protein GrpE NP_777855.1 271815 D 224915 CDS NP_777856.1 27904730 1058208 complement(272425..272685) 1 NC_004545.1 COG2914; hypothetical protein 272685 yfjF 1058208 yfjF Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777856.1 272425 R 224915 CDS NP_777857.1 27904731 1058591 272836..273312 1 NC_004545.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 273312 smpB 1058591 smpB Buchnera aphidicola str. Bp (Baizongia pistaciae) SsrA-binding protein NP_777857.1 272836 D 224915 CDS NP_777858.1 27904732 1058245 273380..273868 1 NC_004545.1 COG0590; deaminase 273868 yfhC 1058245 yfhC Buchnera aphidicola str. Bp (Baizongia pistaciae) deaminase NP_777858.1 273380 D 224915 CDS NP_777859.1 27904733 1058585 complement(273933..274319) 1 NC_004545.1 COG0736; holo-ACP synthase; holo-ACP synthase 274319 acpS 1058585 acpS Buchnera aphidicola str. Bp (Baizongia pistaciae) holo-ACP synthase NP_777859.1 273933 R 224915 CDS NP_777860.1 27904734 1058589 complement(274316..275179) 1 NC_004545.1 COG1159; bex protein; GTP-binding protein Era 275179 era 1058589 era Buchnera aphidicola str. Bp (Baizongia pistaciae) GTP-binding protein Era NP_777860.1 274316 R 224915 CDS NP_777861.1 27904735 1058150 complement(275176..275856) 1 NC_004545.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 275856 rnc 1058150 rnc Buchnera aphidicola str. Bp (Baizongia pistaciae) ribonuclease III NP_777861.1 275176 R 224915 CDS NP_777862.1 27904736 1058242 complement(275957..276889) 1 NC_004545.1 COG0681; SPase I; leader peptidase I; signal peptidase I 276889 lepB 1058242 lepB Buchnera aphidicola str. Bp (Baizongia pistaciae) signal peptidase I NP_777862.1 275957 R 224915 CDS NP_777863.1 27904737 1058408 complement(276925..278712) 1 NC_004545.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 278712 lepA 1058408 lepA Buchnera aphidicola str. Bp (Baizongia pistaciae) GTP-binding protein LepA NP_777863.1 276925 R 224915 CDS NP_777864.1 27904738 1058460 279218..280330 1 NC_004545.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 280330 mnmA 1058460 mnmA Buchnera aphidicola str. Bp (Baizongia pistaciae) tRNA-specific 2-thiouridylase MnmA NP_777864.1 279218 D 224915 CDS NP_777865.1 27904739 1058593 280403..281032 1 NC_004545.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 281032 ycfC 1058593 ycfC Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777865.1 280403 D 224915 CDS NP_777866.1 27904740 1058247 281074..282456 1 NC_004545.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 282456 purB 1058247 purB Buchnera aphidicola str. Bp (Baizongia pistaciae) adenylosuccinate lyase NP_777866.1 281074 D 224915 CDS NP_777867.1 27904741 1058594 282568..283206 1 NC_004545.1 COG0741; murein hydrolase E; membrane-bound lytic murein transglycosylase E 283206 mltE 1058594 mltE Buchnera aphidicola str. Bp (Baizongia pistaciae) membrane-bound lytic murein transglycosylase E NP_777867.1 282568 D 224915 CDS NP_777868.1 27904742 1058250 283259..284083 1 NC_004545.1 COG0623; NADH- dependent enoyl-ACP reductase; cold-shock induced protein 15; CSI15; vegetative protein 241; VEG241; enoyl-ACP reductase 284083 fabI 1058250 fabI Buchnera aphidicola str. Bp (Baizongia pistaciae) enoyl-ACP reductase NP_777868.1 283259 D 224915 CDS NP_777869.1 27904743 1058360 284191..286131 1 NC_004545.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 286131 rnb 1058360 rnb Buchnera aphidicola str. Bp (Baizongia pistaciae) exoribonuclease II NP_777869.1 284191 D 224915 CDS NP_777870.1 27904744 1058226 286404..287051 1 NC_004545.1 COG2095; hypothetical protein 287051 ychE 1058226 ychE Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777870.1 286404 D 224915 CDS NP_777871.1 27904745 1058410 287195..287806 1 NC_004545.1 COG0321; lipoate biosynthesis protein B; lipoate-protein ligase B 287806 lipB 1058410 lipB Buchnera aphidicola str. Bp (Baizongia pistaciae) lipoate-protein ligase B NP_777871.1 287195 D 224915 CDS NP_777872.1 27904746 1058560 287938..288882 1 NC_004545.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 288882 lipA 1058560 lipA Buchnera aphidicola str. Bp (Baizongia pistaciae) lipoyl synthase NP_777872.1 287938 D 224915 CDS NP_777873.1 27904747 1058214 complement(288954..289664) 1 NC_004545.1 COG0284; OMP decarboxylase; OMPDCASE; orotidine 5'-phosphate decarboxylase 289664 pyrF 1058214 pyrF Buchnera aphidicola str. Bp (Baizongia pistaciae) orotidine 5'-phosphate decarboxylase NP_777873.1 288954 R 224915 CDS NP_777874.1 27904748 1058597 289913..290512 1 NC_004545.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 290512 ribA 1058597 ribA Buchnera aphidicola str. Bp (Baizongia pistaciae) GTP cyclohydrolase II NP_777874.1 289913 D 224915 CDS NP_777875.1 27904749 1058248 complement(291112..292584) 1 NC_004545.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 292584 cls 1058248 cls Buchnera aphidicola str. Bp (Baizongia pistaciae) cardiolipin synthetase NP_777875.1 291112 R 224915 CDS NP_777876.1 27904750 1058598 complement(292797..293204) 1 NC_004545.1 COG1607; P14 protein; acyl-CoA thioester hydrolase YciA 293204 yciA 1058598 yciA Buchnera aphidicola str. Bp (Baizongia pistaciae) acyl-CoA thioester hydrolase YciA NP_777876.1 292797 R 224915 CDS NP_777877.1 27904751 1058409 complement(293260..293796) 1 NC_004545.1 COG2917; intracellular septation protein 293796 ispZ 1058409 ispZ Buchnera aphidicola str. Bp (Baizongia pistaciae) intracellular septation protein NP_777877.1 293260 R 224915 CDS NP_777878.1 27904752 1058246 complement(293820..294572) 1 NC_004545.1 hypothetical protein 294572 yciC 1058246 yciC Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777878.1 293820 R 224915 CDS NP_777879.1 27904753 1058592 complement(294709..295518) 1 NC_004545.1 COG0159; tryptophan synthase subunit alpha 295518 trpA 1058592 trpA Buchnera aphidicola str. Bp (Baizongia pistaciae) tryptophan synthase subunit alpha NP_777879.1 294709 R 224915 CDS NP_777880.1 27904754 1058254 complement(295523..296707) 1 NC_004545.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 296707 trpB 1058254 trpB Buchnera aphidicola str. Bp (Baizongia pistaciae) tryptophan synthase subunit beta NP_777880.1 295523 R 224915 CDS NP_777881.1 27904755 1058465 complement(296707..298116) 1 NC_004545.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 298116 trpC 1058465 trpC Buchnera aphidicola str. Bp (Baizongia pistaciae) bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase NP_777881.1 296707 R 224915 CDS NP_777882.1 27904756 1058570 complement(298131..299126) 1 NC_004545.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 299126 trpD 1058570 trpD Buchnera aphidicola str. Bp (Baizongia pistaciae) anthranilate phosphoribosyltransferase NP_777882.1 298131 R 224915 CDS NP_777883.1 27904757 1058512 300608..301351 1 NC_004545.1 COG1187; pseudouridylate synthase; uracil hydrolyase; ribosomal large subunit pseudouridine synthase B 301351 yciL 1058512 yciL Buchnera aphidicola str. Bp (Baizongia pistaciae) ribosomal large subunit pseudouridine synthase B NP_777883.1 300608 D 224915 CDS NP_777884.1 27904758 1058411 301540..302589 1 NC_004545.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 302589 sohB 1058411 sohB Buchnera aphidicola str. Bp (Baizongia pistaciae) periplasmic protease NP_777884.1 301540 D 224915 CDS NP_777885.1 27904759 1058468 complement(303565..304365) 1 NC_004545.1 COG0483; IMPase; IMP; inositol monophosphatase; lithium-sensitive myo-inositol monophosphatase A1; myo-inositol-1(or 4)-monophosphatase 304365 suhB 1058468 suhB Buchnera aphidicola str. Bp (Baizongia pistaciae) myo-inositol-1(or 4)-monophosphatase NP_777885.1 303565 R 224915 CDS NP_777886.1 27904760 1058599 304751..305872 1 NC_004545.1 COG0820; hypothetical protein 305872 yfgB 1058599 yfgB Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777886.1 304751 D 224915 CDS NP_777887.1 27904761 1058412 307258..308535 1 NC_004545.1 COG0124; histidine-tRNA ligase; HisRS; histidyl-tRNA synthetase 308535 hisS 1058412 hisS Buchnera aphidicola str. Bp (Baizongia pistaciae) histidyl-tRNA synthetase NP_777887.1 307258 D 224915 CDS NP_777888.1 27904762 1058462 308661..309914 1 NC_004545.1 COG0112; serine methylase; glycine hydroxymethyltransferase; SHMT; serine hydroxymethyltransferase 309914 glyA 1058462 glyA Buchnera aphidicola str. Bp (Baizongia pistaciae) serine hydroxymethyltransferase NP_777888.1 308661 D 224915 CDS NP_777889.1 27904763 1058253 complement(310034..310717) 1 NC_004545.1 COG0132; dethiobiotin synthase; DTB synthetase; DTBS; dethiobiotin synthetase 310717 bioD 1058253 bioD Buchnera aphidicola str. Bp (Baizongia pistaciae) dethiobiotin synthetase NP_777889.1 310034 R 224915 CDS NP_777890.1 27904764 1058513 complement(310714..311457) 1 NC_004545.1 COG0500; biotin synthesis protein BioC 311457 bioC 1058513 bioC Buchnera aphidicola str. Bp (Baizongia pistaciae) biotin synthesis protein BioC NP_777890.1 310714 R 224915 CDS NP_777891.1 27904765 1058595 complement(311447..312601) 1 NC_004545.1 COG0156; AONS; 8-amino-7- ketopelargonate synthase; 7-keto-8-amino-pelargonic acid synthetase; 7-KAP synthetase; L-alanine--pimelyl CoA ligase; 8-amino-7-oxononanoate synthase 312601 bioF 1058595 bioF Buchnera aphidicola str. Bp (Baizongia pistaciae) 8-amino-7-oxononanoate synthase NP_777891.1 311447 R 224915 CDS NP_777892.1 27904766 1058249 complement(312598..313632) 1 NC_004545.1 COG0502; biotin synthetase; biotin synthase 313632 bioB 1058249 bioB Buchnera aphidicola str. Bp (Baizongia pistaciae) biotin synthase NP_777892.1 312598 R 224915 CDS NP_777893.1 27904767 1058602 313714..315003 1 NC_004545.1 COG0161; 7,8-diamino-pelargonic acid aminotransferase; DAPA aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 315003 bioA 1058602 bioA Buchnera aphidicola str. Bp (Baizongia pistaciae) adenosylmethionine-8-amino-7-oxononanoate aminotransferase NP_777893.1 313714 D 224915 CDS NP_777894.1 27904768 1058415 complement(315011..316006) 1 NC_004545.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 316006 ybhE 1058415 ybhE Buchnera aphidicola str. Bp (Baizongia pistaciae) 6-phosphogluconolactonase NP_777894.1 315011 R 224915 CDS NP_777895.1 27904769 1058463 complement(316434..318527) 1 NC_004545.1 COG1197; TRCF; transcription-repair coupling factor 318527 mfd 1058463 mfd Buchnera aphidicola str. Bp (Baizongia pistaciae) transcription-repair coupling factor NP_777895.1 316434 R 224915 CDS NP_777896.1 27904770 1058260 320110..321111 1 NC_004545.1 COG0057; GAPDH; glyceraldehyde 3-phosphate dehydrogenase 321111 gapA 1058260 gapA Buchnera aphidicola str. Bp (Baizongia pistaciae) glyceraldehyde 3-phosphate dehydrogenase NP_777896.1 320110 D 224915 CDS NP_777897.1 27904771 1058475 complement(321257..321781) 1 NC_004545.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 321781 fldA 1058475 fldA Buchnera aphidicola str. Bp (Baizongia pistaciae) flavodoxin FldA NP_777897.1 321257 R 224915 CDS NP_777898.1 27904772 1058413 322294..323730 1 NC_004545.1 COG0415; DNA photolyase; photoreactivating enzyme; deoxyribodipyrimidine photolyase 323730 phrB 1058413 phrB Buchnera aphidicola str. Bp (Baizongia pistaciae) deoxyribodipyrimidine photolyase NP_777898.1 322294 D 224915 CDS NP_777899.1 27904773 1058514 323766..324509 1 NC_004545.1 COG0327; hypothetical protein 324509 ybgI 1058514 ybgI Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777899.1 323766 D 224915 CDS NP_777900.1 27904774 1058600 324852..327602 1 NC_004545.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 327602 sucA 1058600 sucA Buchnera aphidicola str. Bp (Baizongia pistaciae) 2-oxoglutarate dehydrogenase E1 NP_777900.1 324852 D 224915 CDS NP_777901.1 27904775 1058259 327613..328845 1 NC_004545.1 COG0508; dihydrolipoamide transsuccinylase; E2; E2O; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex 328845 sucB 1058259 sucB Buchnera aphidicola str. Bp (Baizongia pistaciae) dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex NP_777901.1 327613 D 224915 CDS NP_777902.1 27904776 1058262 complement(328948..329469) 1 NC_004545.1 COG2885; surface antigen; PPL; peptidoglycan-associated lipoprotein precursor 329469 pal 1058262 pal Buchnera aphidicola str. Bp (Baizongia pistaciae) peptidoglycan-associated lipoprotein precursor NP_777902.1 328948 R 224915 CDS NP_777903.1 27904777 1058466 330198..330896 1 NC_004545.1 COG0588; phosphoglyceromutase; PGAM; BPG-dependent PGAM; phosphoglycerate mutase 330896 gpmA 1058466 gpmA Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphoglycerate mutase NP_777903.1 330198 D 224915 CDS NP_777904.1 27904778 1058596 331073..332035 1 NC_004545.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 332035 pfkA 1058596 pfkA Buchnera aphidicola str. Bp (Baizongia pistaciae) 6-phosphofructokinase NP_777904.1 331073 D 224915 CDS NP_777905.1 27904779 1058472 complement(332959..333717) 1 NC_004545.1 COG0149; TIM; triosephosphate isomerase 333717 tpiA 1058472 tpiA Buchnera aphidicola str. Bp (Baizongia pistaciae) triosephosphate isomerase NP_777905.1 332959 R 224915 CDS NP_777906.2 161511183 1058255 complement(334005..335705) 1 NC_004545.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 335705 rpsA 1058255 rpsA Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S1 NP_777906.2 334005 R 224915 CDS NP_777907.1 27904781 1058251 complement(335816..336508) 1 NC_004545.1 COG0283; CK; cytidine monophosphate kinase; CMP kinase; (MssA protein; P25; cytidylate kinase 336508 cmk 1058251 cmk Buchnera aphidicola str. Bp (Baizongia pistaciae) cytidylate kinase NP_777907.1 335816 R 224915 CDS NP_777908.1 27904782 1058414 complement(336665..337948) 1 NC_004545.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 337948 aroA 1058414 aroA Buchnera aphidicola str. Bp (Baizongia pistaciae) 3-phosphoshikimate 1-carboxyvinyltransferase NP_777908.1 336665 R 224915 CDS NP_777909.1 27904783 1058665 complement(338022..339143) 1 NC_004545.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 339143 serC 1058665 serC Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphoserine aminotransferase NP_777909.1 338022 R 224915 CDS NP_777910.1 27904784 1058416 complement(339256..340554) 1 NC_004545.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 340554 serS 1058416 serS Buchnera aphidicola str. Bp (Baizongia pistaciae) seryl-tRNA synthetase NP_777910.1 339256 R 224915 CDS NP_777911.1 27904785 1058461 341206..342186 1 NC_004545.1 COG0492; TRXR; thioredoxin reductase 342186 trxB 1058461 trxB Buchnera aphidicola str. Bp (Baizongia pistaciae) thioredoxin reductase NP_777911.1 341206 D 224915 CDS NP_777912.1 27904786 1058202 342241..342459 1 NC_004545.1 COG0361; translation initiation factor IF-1 342459 infA 1058202 infA Buchnera aphidicola str. Bp (Baizongia pistaciae) translation initiation factor IF-1 NP_777912.1 342241 D 224915 CDS NP_777913.1 27904787 1058257 342535..344265 1 NC_004545.1 COG0173; aspartate-tRNA ligase; AspRS; aspartyl-tRNA synthetase 344265 aspS 1058257 aspS Buchnera aphidicola str. Bp (Baizongia pistaciae) aspartyl-tRNA synthetase NP_777913.1 342535 D 224915 CDS NP_777914.1 27904788 1058604 complement(344357..345142) 1 NC_004545.1 COG1108; high-affinity zinc uptake system membrane protein ZnuB 345142 znuB 1058604 znuB Buchnera aphidicola str. Bp (Baizongia pistaciae) high-affinity zinc uptake system membrane protein ZnuB NP_777914.1 344357 R 224915 CDS NP_777915.1 27904789 1058417 complement(345178..345894) 1 NC_004545.1 COG1121; ATP-binding protein; high-affinity zinc uptake system ATP-binding protein ZnuC 345894 znuC 1058417 znuC Buchnera aphidicola str. Bp (Baizongia pistaciae) high-affinity zinc uptake system ATP-binding protein ZnuC NP_777915.1 345178 R 224915 CDS NP_777916.1 27904790 1058605 346080..347210 1 NC_004545.1 COG0739; metalloendopeptidase-like membrane protein 347210 yebA 1058605 yebA Buchnera aphidicola str. Bp (Baizongia pistaciae) metalloendopeptidase-like membrane protein NP_777916.1 346080 D 224915 CDS NP_777917.1 27904791 1058264 complement(347279..348718) 1 NC_004545.1 COG0469; PK; pyruvate kinase 348718 pykA 1058264 pykA Buchnera aphidicola str. Bp (Baizongia pistaciae) pyruvate kinase NP_777917.1 347279 R 224915 CDS NP_777918.1 27904792 1058476 349167..350639 1 NC_004545.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 350639 zwf 1058476 zwf Buchnera aphidicola str. Bp (Baizongia pistaciae) glucose-6-phosphate 1-dehydrogenase NP_777918.1 349167 D 224915 CDS NP_777919.1 27904793 1058603 350972..351847 1 NC_004545.1 metalloprotease; heat shock protein HtpX 351847 htpX 1058603 htpX Buchnera aphidicola str. Bp (Baizongia pistaciae) heat shock protein HtpX NP_777919.1 350972 D 224915 CDS NP_777920.1 27904794 1058265 352488..354047 1 NC_004545.1 COG1253; COG0861; hypothetical protein 354047 yoaE 1058265 yoaE Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777920.1 352488 D 224915 CDS NP_777921.1 27904795 1058263 354198..354863 1 NC_004545.1 COG1214; protease precursor 354863 yeaZ 1058263 yeaZ Buchnera aphidicola str. Bp (Baizongia pistaciae) protease precursor NP_777921.1 354198 D 224915 CDS NP_777922.1 27904796 1058266 complement(354884..355135) 1 NC_004545.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 355135 minE 1058266 minE Buchnera aphidicola str. Bp (Baizongia pistaciae) cell division topological specificity factor MinE NP_777922.1 354884 R 224915 CDS NP_777923.1 27904797 1058270 complement(355139..355951) 1 NC_004545.1 COG2894; septum site-determining protein MinD; septum site-determining protein 355951 minD 1058270 minD Buchnera aphidicola str. Bp (Baizongia pistaciae) septum site-determining protein NP_777923.1 355139 R 224915 CDS NP_777924.1 27904798 1058473 complement(355976..356680) 1 NC_004545.1 COG0850; septum site-determining protein MinC 356680 minC 1058473 minC Buchnera aphidicola str. Bp (Baizongia pistaciae) septum site-determining protein MinC NP_777924.1 355976 R 224915 CDS NP_777925.1 27904799 1058474 357059..358039 1 NC_004545.1 COG2813; rRNA (guanine-N2-)-methyltransferase; 16S rRNA m2G1207 methyltransferase; ribosomal RNA small subunit methyltransferase C 358039 rsmC 1058474 rsmC Buchnera aphidicola str. Bp (Baizongia pistaciae) ribosomal RNA small subunit methyltransferase C NP_777925.1 357059 D 224915 CDS NP_777926.1 27904800 1058443 complement(358702..360243) 1 NC_004545.1 COG0728; virulence factor MviN 360243 mviN 1058443 mviN Buchnera aphidicola str. Bp (Baizongia pistaciae) virulence factor MviN NP_777926.1 358702 R 224915 CDS NP_777927.1 27904801 1058478 361919..362329 1 NC_004545.1 COG1815; flagellar basal-body rod protein FlgB 362329 flgB 1058478 flgB Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar basal-body rod protein FlgB NP_777927.1 361919 D 224915 CDS NP_777928.1 27904802 1058256 362333..362743 1 NC_004545.1 COG1558; proximal rod protein; flagellar basal body rod protein FlgC 362743 flgC 1058256 flgC Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar basal body rod protein FlgC NP_777928.1 362333 D 224915 CDS NP_777929.2 161511182 1058135 363479..364225 1 NC_004545.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 364225 flgF 1058135 flgF Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar basal body rod protein FlgF NP_777929.2 363479 D 224915 CDS NP_777930.1 27904804 1058267 364255..365037 1 NC_004545.1 COG1749; distal rod protein; flagellar basal-body rod protein FlgG 365037 flgG 1058267 flgG Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar basal-body rod protein FlgG NP_777930.1 364255 D 224915 CDS NP_777931.1 27904805 1058610 365107..365841 1 NC_004545.1 COG2063; basal body L-ring protein; flagellar L-ring protein precursor 365841 flgH 1058610 flgH Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar L-ring protein precursor NP_777931.1 365107 D 224915 CDS NP_777932.1 27904806 1058272 365946..367073 1 NC_004545.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 367073 flgI 1058272 flgI Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar basal body P-ring biosynthesis protein FlgA NP_777932.1 365946 D 224915 CDS NP_777933.1 27904807 1058268 367077..367529 1 NC_004545.1 COG1705; flagellar protein FlgJ-like protein 367529 flgJ 1058268 flgJ Buchnera aphidicola str. Bp (Baizongia pistaciae) flagellar protein FlgJ-like protein NP_777933.1 367077 D 224915 CDS NP_777934.1 27904808 1058418 complement(368538..369770) 1 NC_004545.1 COG1530; ribonuclease G 369770 rne 1058418 rne Buchnera aphidicola str. Bp (Baizongia pistaciae) ribonuclease G NP_777934.1 368538 R 224915 CDS NP_777935.1 27904809 1058261 370167..371114 1 NC_004545.1 COG0564; pseudouridylate synthase; uracil hydrolyase; ribosomal large subunit pseudouridine synthase D 371114 rluC 1058261 rluC Buchnera aphidicola str. Bp (Baizongia pistaciae) ribosomal large subunit pseudouridine synthase D NP_777935.1 370167 D 224915 CDS NP_777936.1 27904810 1058480 371349..371513 1 NC_004545.1 COG0333; 50S ribosomal protein L32 371513 rpmF 1058480 rpmF Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L32 NP_777936.1 371349 D 224915 CDS NP_777937.1 27904811 1058274 371796..372731 1 NC_004545.1 COG0331; MCT; malonyl CoA-ACP transacylase 372731 fabD 1058274 fabD Buchnera aphidicola str. Bp (Baizongia pistaciae) malonyl CoA-ACP transacylase NP_777937.1 371796 D 224915 CDS NP_777938.1 27904812 1058479 372741..373478 1 NC_004545.1 COG1028; 3-ketoacyl- acyl carrier protein reductase; 3-oxoacyl-ACP reductase 373478 fabG 1058479 fabG Buchnera aphidicola str. Bp (Baizongia pistaciae) 3-oxoacyl-ACP reductase NP_777938.1 372741 D 224915 CDS NP_777939.1 27904813 1058611 373583..373819 1 NC_004545.1 COG0236; ACP; acyl carrier protein 373819 acpP 1058611 acpP Buchnera aphidicola str. Bp (Baizongia pistaciae) acyl carrier protein NP_777939.1 373583 D 224915 CDS NP_777940.1 27904814 1058609 374000..374653 1 NC_004545.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 374653 tmk 1058609 tmk Buchnera aphidicola str. Bp (Baizongia pistaciae) thymidylate kinase NP_777940.1 374000 D 224915 CDS NP_777941.1 27904815 1058139 374650..375660 1 NC_004545.1 COG0470; DNA polymerase III delta' subunit 375660 holB 1058139 holB Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA polymerase III delta' subunit NP_777941.1 374650 D 224915 CDS NP_777942.1 27904816 1058419 375693..376490 1 NC_004545.1 COG0084; deoxyribonuclease 376490 ycfH 1058419 ycfH Buchnera aphidicola str. Bp (Baizongia pistaciae) deoxyribonuclease NP_777942.1 375693 D 224915 CDS NP_777943.1 27904817 1058276 376638..378077 1 NC_004545.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunits IIBC 378077 ptsG 1058276 ptsG Buchnera aphidicola str. Bp (Baizongia pistaciae) PTS system glucose-specific transporter subunits IIBC NP_777943.1 376638 D 224915 CDS NP_777944.1 27904818 1058608 378195..378533 1 NC_004545.1 COG0537; HIT-like protein 378533 ycfF 1058608 ycfF Buchnera aphidicola str. Bp (Baizongia pistaciae) HIT-like protein NP_777944.1 378195 D 224915 CDS NP_777945.1 27904819 1058271 complement(379444..380844) 1 NC_004545.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 380844 asnC 1058271 asnC Buchnera aphidicola str. Bp (Baizongia pistaciae) asparaginyl-tRNA synthetase NP_777945.1 379444 R 224915 CDS NP_777946.1 27904820 1058459 complement(381948..382886) 1 NC_004545.1 COG1054; hypothetical protein 382886 yceA 1058459 yceA Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777946.1 381948 R 224915 CDS NP_777947.1 27904821 1058279 complement(382967..385837) 1 NC_004545.1 COG0525; valine-tRNA ligase; VALRS; valyl-tRNA synthetase 385837 valS 1058279 valS Buchnera aphidicola str. Bp (Baizongia pistaciae) valyl-tRNA synthetase NP_777947.1 382967 R 224915 CDS NP_777948.1 27904822 1058145 complement(385912..387417) 1 NC_004545.1 COG0260; leucine aminopeptidase; LAP; leucyl aminopeptidase; aminopeptidase A/I; cytosol aminopeptidase 387417 pepA 1058145 pepA Buchnera aphidicola str. Bp (Baizongia pistaciae) cytosol aminopeptidase NP_777948.1 385912 R 224915 CDS NP_777949.1 27904823 1058424 387894..388913 1 NC_004545.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I 388913 argF 1058424 argF Buchnera aphidicola str. Bp (Baizongia pistaciae) ornithine carbamoyltransferase subunit I NP_777949.1 387894 D 224915 CDS NP_777950.1 27904824 1058141 389813..390193 1 NC_004545.1 COG0251; p14.5; UK114 antigen homolog; translational inhibitor protein 390193 yhaR 1058141 yhaR Buchnera aphidicola str. Bp (Baizongia pistaciae) translational inhibitor protein NP_777950.1 389813 D 224915 CDS NP_777951.1 27904825 1058142 complement(390346..392154) 1 NC_004545.1 COG0513; dead-box protein; ATP-dependent RNA helicase 392154 deaD 1058142 deaD Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP-dependent RNA helicase NP_777951.1 390346 R 224915 CDS NP_777952.1 27904826 1058421 complement(392685..394766) 1 NC_004545.1 COG1185; polynucleotide phosphorylase; PNPase; CAP87K; polynucleotide phosphorylase 394766 pnp 1058421 pnp Buchnera aphidicola str. Bp (Baizongia pistaciae) polynucleotide phosphorylase NP_777952.1 392685 R 224915 CDS NP_777953.1 27904827 1058137 complement(395007..395276) 1 NC_004545.1 COG0184; BS18; 30S ribosomal protein S15 395276 rpsO 1058137 rpsO Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S15 NP_777953.1 395007 R 224915 CDS NP_777954.1 27904828 1058607 complement(395408..396316) 1 NC_004545.1 COG0130; tRNA pseudouridine 55 synthase; Psi55 synthase; pseudouridylate synthase; uracil hydrolyase; P35 protein; tRNA pseudouridine synthase B 396316 truB 1058607 truB Buchnera aphidicola str. Bp (Baizongia pistaciae) tRNA pseudouridine synthase B NP_777954.1 395408 R 224915 CDS NP_777955.1 27904829 1058277 complement(396349..396723) 1 NC_004545.1 COG0858; P15B protein; ribosome-binding factor A 396723 rbfA 1058277 rbfA Buchnera aphidicola str. Bp (Baizongia pistaciae) ribosome-binding factor A NP_777955.1 396349 R 224915 CDS NP_777956.1 27904830 1058140 complement(396760..399390) 1 NC_004545.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 399390 infB 1058140 infB Buchnera aphidicola str. Bp (Baizongia pistaciae) translation initiation factor IF-2 NP_777956.1 396760 R 224915 CDS NP_777957.1 27904831 1058269 complement(399405..400898) 1 NC_004545.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 400898 nusA 1058269 nusA Buchnera aphidicola str. Bp (Baizongia pistaciae) transcription elongation factor NusA NP_777957.1 399405 R 224915 CDS NP_777958.1 27904832 1058615 complement(401764..403125) 1 NC_004545.1 COG1109; MrsA protein; phosphoglucosamine mutase 403125 mrsA 1058615 mrsA Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphoglucosamine mutase NP_777958.1 401764 R 224915 CDS NP_777959.1 27904833 1058282 complement(403520..405352) 1 NC_004545.1 COG0465; cell division protein 405352 hflB 1058282 hflB Buchnera aphidicola str. Bp (Baizongia pistaciae) cell division protein NP_777959.1 403520 R 224915 CDS NP_777960.1 27904834 1058422 complement(405411..406043) 1 NC_004545.1 COG0293; rRNA (uridine-2'-O-)-methyltransferase; 23S rRNA m2U2552 methyltransferase; cell division protein FtsJ; ribosomal RNA large subunit methyltransferase J 406043 ftsJ 1058422 ftsJ Buchnera aphidicola str. Bp (Baizongia pistaciae) ribosomal RNA large subunit methyltransferase J NP_777960.1 405411 R 224915 CDS NP_777961.1 27904835 1058278 complement(406178..406657) 1 NC_004545.1 COG0782; transcript cleavage factor GreA; transcription elongation factor GreA 406657 greA 1058278 greA Buchnera aphidicola str. Bp (Baizongia pistaciae) transcription elongation factor GreA NP_777961.1 406178 R 224915 CDS NP_777962.1 27904836 1058420 407141..407380 1 NC_004545.1 COG0271; hypothetical protein 407380 yrbA 1058420 yrbA Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777962.1 407141 D 224915 CDS NP_777963.1 27904837 1058380 407401..408651 1 NC_004545.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 408651 murA 1058380 murA Buchnera aphidicola str. Bp (Baizongia pistaciae) UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_777963.1 407401 D 224915 CDS NP_777964.1 27904838 1058613 408888..409226 1 NC_004545.1 COG0261; 50S ribosomal protein L21 409226 rplU 1058613 rplU Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L21 NP_777964.1 408888 D 224915 CDS NP_777965.1 27904839 1058144 409216..409473 1 NC_004545.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 409473 rpmA 1058144 rpmA Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L27 NP_777965.1 409216 D 224915 CDS NP_777966.1 27904840 1058281 409712..410728 1 NC_004545.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 410728 obgE 1058281 obgE Buchnera aphidicola str. Bp (Baizongia pistaciae) GTPase ObgE NP_777966.1 409712 D 224915 CDS NP_777967.1 27904841 1058481 complement(410946..411338) 1 NC_004545.1 COG0103; BS10; 30S ribosomal protein S9 411338 rpsI 1058481 rpsI Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S9 NP_777967.1 410946 R 224915 CDS NP_777968.1 27904842 1058612 complement(411351..411785) 1 NC_004545.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 411785 rplM 1058612 rplM Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L13 NP_777968.1 411351 R 224915 CDS NP_777969.1 27904843 1058143 412135..413250 1 NC_004545.1 chorismate mutase; CM; prephenate dehydratase; PDT; COG1605; COG0077; P-protein 413250 pheA 1058143 pheA Buchnera aphidicola str. Bp (Baizongia pistaciae) P-protein NP_777969.1 412135 D 224915 CDS NP_777970.1 27904844 1058429 413493..414845 1 NC_004545.1 COG0541; fifty-four homolog; P48; signal recognition particle protein 414845 ffh 1058429 ffh Buchnera aphidicola str. Bp (Baizongia pistaciae) signal recognition particle protein NP_777970.1 413493 D 224915 CDS NP_777971.1 27904845 1058426 414937..415200 1 NC_004545.1 COG0228; BS17; 30S ribosomal protein S16 415200 rpsP 1058426 rpsP Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S16 NP_777971.1 414937 D 224915 CDS NP_777972.1 27904846 1058621 415221..415763 1 NC_004545.1 COG0806; 21K; 16S rRNA-processing protein RimM 415763 rimM 1058621 rimM Buchnera aphidicola str. Bp (Baizongia pistaciae) 16S rRNA-processing protein RimM NP_777972.1 415221 D 224915 CDS NP_777973.1 27904847 1058283 415789..416541 1 NC_004545.1 COG0336; M1G-methyltransferase; tRNA [GM37] methyltransferase; tRNA (guanine-N1)-methyltransferase 416541 trmD 1058283 trmD Buchnera aphidicola str. Bp (Baizongia pistaciae) tRNA (guanine-N1)-methyltransferase NP_777973.1 415789 D 224915 CDS NP_777974.1 27904848 1058275 416573..416929 1 NC_004545.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 416929 rplS 1058275 rplS Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L19 NP_777974.1 416573 D 224915 CDS NP_777975.1 27904849 1058385 complement(417073..418524) 1 NC_004545.1 COG0312; TldD protein 418524 tldD 1058385 tldD Buchnera aphidicola str. Bp (Baizongia pistaciae) TldD protein NP_777975.1 417073 R 224915 CDS NP_777976.1 27904850 1058286 418870..419334 1 NC_004545.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 419334 aroQ 1058286 aroQ Buchnera aphidicola str. Bp (Baizongia pistaciae) 3-dehydroquinate dehydratase NP_777976.1 418870 D 224915 CDS NP_777977.1 27904851 1058486 complement(419471..420424) 1 NC_004545.1 COG0564; pseudouridylate synthase; uracil hydrolyase; ribosomal large subunit pseudouridine synthase D 420424 rluD 1058486 rluD Buchnera aphidicola str. Bp (Baizongia pistaciae) ribosomal large subunit pseudouridine synthase D NP_777977.1 419471 R 224915 CDS NP_777978.1 27904852 1058285 420763..423405 1 NC_004545.1 COG0013; alanine-tRNA ligase; AlaRS; alanyl-tRNA synthetase 423405 alaS 1058285 alaS Buchnera aphidicola str. Bp (Baizongia pistaciae) alanyl-tRNA synthetase NP_777978.1 420763 D 224915 CDS NP_777979.1 27904853 1058482 423584..423766 1 NC_004545.1 COG1551; repressor RSMA; carbon storage regulator-like protein 423766 csrA 1058482 csrA Buchnera aphidicola str. Bp (Baizongia pistaciae) carbon storage regulator-like protein NP_777979.1 423584 D 224915 CDS NP_777980.1 27904854 1058287 424268..425833 1 NC_004545.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 425833 gshA 1058287 gshA Buchnera aphidicola str. Bp (Baizongia pistaciae) glutamate--cysteine ligase NP_777980.1 424268 D 224915 CDS NP_777981.1 27904855 1058432 426182..426919 1 NC_004545.1 COG2356; endo I; endonuclease I 426919 endA 1058432 endA Buchnera aphidicola str. Bp (Baizongia pistaciae) endonuclease I NP_777981.1 426182 D 224915 CDS NP_777982.1 27904856 1058425 complement(427210..427797) 1 NC_004545.1 COG0212; 5-formyltetrahydrofolate cyclo-ligase 427797 ygfA 1058425 ygfA Buchnera aphidicola str. Bp (Baizongia pistaciae) 5-formyltetrahydrofolate cyclo-ligase NP_777982.1 427210 R 224915 CDS NP_777983.1 27904857 1058288 complement(428173..428829) 1 NC_004545.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 428829 rpiA 1058288 rpiA Buchnera aphidicola str. Bp (Baizongia pistaciae) ribose-5-phosphate isomerase A NP_777983.1 428173 R 224915 CDS NP_777984.1 27904858 1058382 429617..431269 1 NC_004545.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 431269 glnS 1058382 glnS Buchnera aphidicola str. Bp (Baizongia pistaciae) glutaminyl-tRNA synthetase NP_777984.1 429617 D 224915 CDS NP_777985.1 27904859 1058378 431582..433216 1 NC_004545.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 433216 pyrG 1058378 pyrG Buchnera aphidicola str. Bp (Baizongia pistaciae) CTP synthetase NP_777985.1 431582 D 224915 CDS NP_777986.1 27904860 1058617 433283..434578 1 NC_004545.1 COG0148; 2-phosphoglycerate dehydratase; 2-phospho-D- glycerate hydro-lyase; enolase 434578 eno 1058617 eno Buchnera aphidicola str. Bp (Baizongia pistaciae) enolase NP_777986.1 433283 D 224915 CDS NP_777987.1 27904861 1058312 complement(437485..439887) 1 NC_004545.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 439887 mutS 1058312 mutS Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA mismatch repair protein MutS NP_777987.1 437485 R 224915 CDS NP_777988.1 27904862 1058487 440143..440778 1 NC_004545.1 COG0526; thiol:disulfide interchange protein DsbA 440778 dsbA 1058487 dsbA Buchnera aphidicola str. Bp (Baizongia pistaciae) thiol:disulfide interchange protein DsbA NP_777988.1 440143 D 224915 CDS NP_777989.1 27904863 1058290 440900..441808 1 NC_004545.1 COG0258; 5'-3' exonuclease 441808 polA 1058290 polA Buchnera aphidicola str. Bp (Baizongia pistaciae) 5'-3' exonuclease NP_777989.1 440900 D 224915 CDS NP_777990.1 27904864 1058619 complement(442124..442834) 1 NC_004545.1 COG0218; GTP-binding protein EngB 442834 engB 1058619 engB Buchnera aphidicola str. Bp (Baizongia pistaciae) GTP-binding protein EngB NP_777990.1 442124 R 224915 CDS NP_777991.1 27904865 1058485 442992..444842 1 NC_004545.1 COG1217; tyrosine phosphorylated protein A; GTP-binding protein TypA 444842 typA 1058485 typA Buchnera aphidicola str. Bp (Baizongia pistaciae) GTP-binding protein TypA NP_777991.1 442992 D 224915 CDS NP_777992.1 27904866 1058136 complement(444887..445510) 1 NC_004545.1 COG0194; GMP kinase; guanylate kinase 445510 gmk 1058136 gmk Buchnera aphidicola str. Bp (Baizongia pistaciae) guanylate kinase NP_777992.1 444887 R 224915 CDS NP_777993.1 27904867 1058430 complement(445638..446432) 1 NC_004545.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 446432 thyA 1058430 thyA Buchnera aphidicola str. Bp (Baizongia pistaciae) thymidylate synthase NP_777993.1 445638 R 224915 CDS NP_777994.1 27904868 1058622 complement(446453..447304) 1 NC_004545.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 447304 lgt 1058622 lgt Buchnera aphidicola str. Bp (Baizongia pistaciae) prolipoprotein diacylglyceryl transferase NP_777994.1 446453 R 224915 CDS NP_777995.1 27904869 1058625 complement(447462..448718) 1 NC_004545.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 448718 lysA 1058625 lysA Buchnera aphidicola str. Bp (Baizongia pistaciae) diaminopimelate decarboxylase NP_777995.1 447462 R 224915 CDS NP_777996.1 27904870 1058623 complement(448844..450346) 1 NC_004545.1 COG1190; lysine-tRNA ligase; LYSRS; lysyl-tRNA synthetase 450346 lysS 1058623 lysS Buchnera aphidicola str. Bp (Baizongia pistaciae) lysyl-tRNA synthetase NP_777996.1 448844 R 224915 CDS NP_777997.1 27904871 1058428 complement(450407..451420) 1 NC_004545.1 COG1186; RF-2; peptide chain release factor 2 451420 prfB 1058428 prfB Buchnera aphidicola str. Bp (Baizongia pistaciae) peptide chain release factor 2 NP_777997.1 450407 R 224915 CDS NP_777998.1 27904872 1058431 451745..452701 1 NC_004545.1 COG0354; hypothetical protein 452701 ygfZ 1058431 ygfZ Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_777998.1 451745 D 224915 CDS NP_777999.1 27904873 1058618 452828..454165 1 NC_004545.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 454165 yleA 1058618 yleA Buchnera aphidicola str. Bp (Baizongia pistaciae) (dimethylallyl)adenosine tRNA methylthiotransferase NP_777999.1 452828 D 224915 CDS NP_778000.1 27904874 1058484 454364..454828 1 NC_004545.1 COG0319; hypothetical protein 454828 ybeY 1058484 ybeY Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778000.1 454364 D 224915 CDS NP_778001.1 27904875 1058291 454913..455761 1 NC_004545.1 COG1253; TLYC; magnesium and cobalt efflux protein CorC 455761 corC 1058291 corC Buchnera aphidicola str. Bp (Baizongia pistaciae) magnesium and cobalt efflux protein CorC NP_778001.1 454913 D 224915 CDS NP_778002.1 27904876 1058295 456713..459298 1 NC_004545.1 COG0495; leucine-tRNA ligase; LEURS; leucyl-tRNA synthetase 459298 leuS 1058295 leuS Buchnera aphidicola str. Bp (Baizongia pistaciae) leucyl-tRNA synthetase NP_778002.1 456713 D 224915 CDS NP_778003.1 27904877 1058489 459348..460346 1 NC_004545.1 COG1466; DNA polymerase III delta subunit 460346 holA 1058489 holA Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA polymerase III delta subunit NP_778003.1 459348 D 224915 CDS NP_778004.1 27904878 1058379 460933..461172 1 NC_004545.1 COG0425; SirA protein 461172 sirA 1058379 sirA Buchnera aphidicola str. Bp (Baizongia pistaciae) SirA protein NP_778004.1 460933 D 224915 CDS NP_778005.1 27904879 1058293 complement(461390..462499) 1 NC_004545.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 462499 asd 1058293 asd Buchnera aphidicola str. Bp (Baizongia pistaciae) aspartate-semialdehyde dehydrogenase NP_778005.1 461390 R 224915 CDS NP_778006.1 27904880 1058433 463056..463655 1 NC_004545.1 YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); dITP- and XTP- hydrolase 463655 yhgN 1058433 yhgN Buchnera aphidicola str. Bp (Baizongia pistaciae) dITP- and XTP- hydrolase NP_778006.1 463056 D 224915 CDS NP_778007.1 27904881 1058371 463907..465088 1 NC_004545.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 465088 pgk 1058371 pgk Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphoglycerate kinase NP_778007.1 463907 D 224915 CDS NP_778008.1 27904882 1058292 465127..466206 1 NC_004545.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 466206 fba 1058292 fba Buchnera aphidicola str. Bp (Baizongia pistaciae) fructose-bisphosphate aldolase NP_778008.1 465127 D 224915 CDS NP_778009.1 27904883 1058436 466366..467211 1 NC_004545.1 COG0668; hypothetical protein 467211 yggB 1058436 yggB Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778009.1 466366 D 224915 CDS NP_778010.1 27904884 1058505 467229..470564 1 NC_004545.1 COG1330; exodeoxyribonuclease V polypeptide; exodeoxyribonuclease V subunit gamma 470564 recC 1058505 recC Buchnera aphidicola str. Bp (Baizongia pistaciae) exodeoxyribonuclease V subunit gamma NP_778010.1 467229 D 224915 CDS NP_778011.1 27904885 1058367 470604..474146 1 NC_004545.1 COG1074; exodeoxyribonuclease V polypeptide; exodeoxyribonuclease V subunit beta 474146 recB 1058367 recB Buchnera aphidicola str. Bp (Baizongia pistaciae) exodeoxyribonuclease V subunit beta NP_778011.1 470604 D 224915 CDS NP_778012.1 27904886 1058296 474168..476024 1 NC_004545.1 COG0507; exodeoxyribonuclease V subunit alpha 476024 recD 1058296 recD Buchnera aphidicola str. Bp (Baizongia pistaciae) exodeoxyribonuclease V subunit alpha NP_778012.1 474168 D 224915 CDS NP_778013.1 27904887 1058626 476422..476901 1 NC_004545.1 COG0054; DMRL synthase; lumazine synthase; riboflavin synthase beta chain; 6,7-dimethyl-8-ribityllumazine synthase 476901 ribH 1058626 ribH Buchnera aphidicola str. Bp (Baizongia pistaciae) 6,7-dimethyl-8-ribityllumazine synthase NP_778013.1 476422 D 224915 CDS NP_778014.1 27904888 1058488 476991..478109 1 NC_004545.1 COG0117; COG1985; riboflavin biosynthesis protein RibD; riboflavin-specific deaminase; HTP reductase; diaminohydroxyphosphoribosylaminopyrimidine deaminase 478109 ribD 1058488 ribD Buchnera aphidicola str. Bp (Baizongia pistaciae) diaminohydroxyphosphoribosylaminopyrimidine deaminase NP_778014.1 476991 D 224915 CDS NP_778015.1 27904889 1058628 478273..478707 1 NC_004545.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 478707 nusB 1058628 nusB Buchnera aphidicola str. Bp (Baizongia pistaciae) transcription antitermination protein NusB NP_778015.1 478273 D 224915 CDS NP_778016.1 27904890 1058624 complement(481565..482749) 1 NC_004545.1 COG0477; transport protein 482749 yajR 1058624 yajR Buchnera aphidicola str. Bp (Baizongia pistaciae) transport protein NP_778016.1 481565 R 224915 CDS NP_778017.1 27904891 1058304 482901..483185 1 NC_004545.1 COG2920; sulfite reductase subunit protein 483185 yccK 1058304 yccK Buchnera aphidicola str. Bp (Baizongia pistaciae) sulfite reductase subunit protein NP_778017.1 482901 D 224915 CDS NP_778018.1 27904892 1058377 complement(483241..484107) 1 NC_004545.1 COG0109; heme O synthase; protoheme IX farnesyltransferase 484107 cyoE 1058377 cyoE Buchnera aphidicola str. Bp (Baizongia pistaciae) protoheme IX farnesyltransferase NP_778018.1 483241 R 224915 CDS NP_778019.1 27904893 1058297 complement(484095..484397) 1 NC_004545.1 COG3125; cytochrome O ubiquinol oxidase protein CyoD 484397 cyoD 1058297 cyoD Buchnera aphidicola str. Bp (Baizongia pistaciae) cytochrome O ubiquinol oxidase protein CyoD NP_778019.1 484095 R 224915 CDS NP_778020.1 27904894 1058631 complement(484423..485007) 1 NC_004545.1 COG1845; ubiquinol oxidase chain C; cytochrome O ubiquinol oxidase subunit III 485007 cyoC 1058631 cyoC Buchnera aphidicola str. Bp (Baizongia pistaciae) cytochrome O ubiquinol oxidase subunit III NP_778020.1 484423 R 224915 CDS NP_778021.1 27904895 1058363 complement(485048..487027) 1 NC_004545.1 COG0843; cytochrome O subunit 1; oxidase BO(3) subunit 1; cytochrome O ubiquinol oxidase subunit 1; ubiquinol oxidase chain A; ubiquinol oxidase polypeptide I 487027 cyoB 1058363 cyoB Buchnera aphidicola str. Bp (Baizongia pistaciae) ubiquinol oxidase polypeptide I NP_778021.1 485048 R 224915 CDS NP_778022.1 27904896 1058438 complement(487099..487977) 1 NC_004545.1 COG1622; cytochrome O subunit 2; oxidase BO(3) subunit 2; cytochrome O ubiquinol oxidase subunit 2; ubiquinol oxidase chain B; ubiquinol oxidase polypeptide II precursor 487977 cyoA 1058438 cyoA Buchnera aphidicola str. Bp (Baizongia pistaciae) ubiquinol oxidase polypeptide II precursor NP_778022.1 487099 R 224915 CDS NP_778023.1 27904897 1058439 488308..488625 1 NC_004545.1 COG0271; BolA 488625 bolA 1058439 bolA Buchnera aphidicola str. Bp (Baizongia pistaciae) BolA NP_778023.1 488308 D 224915 CDS NP_778024.1 27904898 1058632 489272..489889 1 NC_004545.1 COG0740; endopeptidase Clp; caseinolytic protease; protease Ti; heat shock protein F21.5; ATP-dependent Clp protease proteolytic subunit 489889 clpP 1058632 clpP Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP-dependent Clp protease proteolytic subunit NP_778024.1 489272 D 224915 CDS NP_778025.1 27904899 1058357 489973..491259 1 NC_004545.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 491259 clpX 1058357 clpX Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP-dependent protease ATP-binding subunit ClpX NP_778025.1 489973 D 224915 CDS NP_778026.1 27904900 1058354 491446..493788 1 NC_004545.1 COG0466; ATP-dependent protease La 493788 lon 1058354 lon Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP-dependent protease La NP_778026.1 491446 D 224915 CDS NP_778027.1 27904901 1058491 493897..495432 1 NC_004545.1 COG0760; PPIase D; rotamase D; peptidyl-prolyl cis-trans isomerase D 495432 ppiD 1058491 ppiD Buchnera aphidicola str. Bp (Baizongia pistaciae) peptidyl-prolyl cis-trans isomerase D NP_778027.1 493897 D 224915 CDS NP_778028.1 27904902 1058305 495885..497624 1 NC_004545.1 COG1132; ATP-binding protein; ABC transporter 497624 mdlA 1058305 mdlA Buchnera aphidicola str. Bp (Baizongia pistaciae) ABC transporter NP_778028.1 495885 D 224915 CDS NP_778029.1 27904903 1058630 497653..499389 1 NC_004545.1 COG1132; ATP-binding protein; ATP transporter 499389 mdlB 1058630 mdlB Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP transporter NP_778029.1 497653 D 224915 CDS NP_778030.1 27904904 1058627 499709..500821 1 NC_004545.1 COG2812; DNA polymerase III subunit gamma 500821 dnaX 1058627 dnaX Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA polymerase III subunit gamma NP_778030.1 499709 D 224915 CDS NP_778031.1 27904905 1058350 501046..501378 1 NC_004545.1 COG0718; hypothetical protein 501378 ybaB 1058350 ybaB Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778031.1 501046 D 224915 CDS NP_778032.1 27904906 1058298 501507..503387 1 NC_004545.1 molecular chaperone; heat shock protein 90 503387 htpG 1058298 htpG Buchnera aphidicola str. Bp (Baizongia pistaciae) heat shock protein 90 NP_778032.1 501507 D 224915 CDS NP_778033.1 27904907 1058490 503441..504088 1 NC_004545.1 COG0563; ATP-AMP transphosphorylase; adenylate kinase 504088 adk 1058490 adk Buchnera aphidicola str. Bp (Baizongia pistaciae) adenylate kinase NP_778033.1 503441 D 224915 CDS NP_778034.1 27904908 1058346 504309..505172 1 NC_004545.1 COG0190; FolD bifunctional protein; methylenetetrahydrofolate dehydrogenase 505172 folD 1058346 folD Buchnera aphidicola str. Bp (Baizongia pistaciae) methylenetetrahydrofolate dehydrogenase NP_778034.1 504309 D 224915 CDS NP_778035.1 27904909 1058301 complement(505190..506599) 1 NC_004545.1 COG0215; cysteine-tRNA ligase; CysRS; cysteinyl-tRNA synthetase 506599 cysS 1058301 cysS Buchnera aphidicola str. Bp (Baizongia pistaciae) cysteinyl-tRNA synthetase NP_778035.1 505190 R 224915 CDS NP_778036.1 27904910 1058299 507002..507268 1 NC_004545.1 COG2921; hypothetical protein 507268 ybeD 1058299 ybeD Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778036.1 507002 D 224915 CDS NP_778037.1 27904911 1058348 complement(507389..507598) 1 NC_004545.1 member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE 507598 cspE 1058348 cspE Buchnera aphidicola str. Bp (Baizongia pistaciae) cold shock protein CspE NP_778037.1 507389 R 224915 CDS NP_778038.1 27904912 1058638 complement(511465..512313) 1 NC_004545.1 COG0169; shikimate 5-dehydrogenase 512313 aroE 1058638 aroE Buchnera aphidicola str. Bp (Baizongia pistaciae) shikimate 5-dehydrogenase NP_778038.1 511465 R 224915 CDS NP_778039.1 27904913 1058492 complement(512306..512866) 1 NC_004545.1 COG0009; hypothetical protein 512866 yrdC 1058492 yrdC Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778039.1 512306 R 224915 CDS NP_778040.1 27904914 1058352 513039..513521 1 NC_004545.1 COG0242; PDF; formylmethionine deformylase; polypeptide deformylase 513521 def 1058352 def Buchnera aphidicola str. Bp (Baizongia pistaciae) polypeptide deformylase NP_778040.1 513039 D 224915 CDS NP_778041.1 27904915 1058634 513523..514494 1 NC_004545.1 COG0223; methionyl-tRNA formyltransferase 514494 fmt 1058634 fmt Buchnera aphidicola str. Bp (Baizongia pistaciae) methionyl-tRNA formyltransferase NP_778041.1 513523 D 224915 CDS NP_778042.1 27904916 1058442 complement(515758..516147) 1 NC_004545.1 COG0203; 50S ribosomal protein L17 516147 rplQ 1058442 rplQ Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L17 NP_778042.1 515758 R 224915 CDS NP_778043.1 27904917 1058302 complement(516199..517194) 1 NC_004545.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 517194 rpoA 1058302 rpoA Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA-directed RNA polymerase subunit alpha NP_778043.1 516199 R 224915 CDS NP_778044.1 27904918 1058509 complement(517223..517843) 1 NC_004545.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 517843 rpsD 1058509 rpsD Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S4 NP_778044.1 517223 R 224915 CDS NP_778045.1 27904919 1058493 complement(517892..518281) 1 NC_004545.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 518281 rpsK 1058493 rpsK Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S11 NP_778045.1 517892 R 224915 CDS NP_778046.1 27904920 1058635 complement(518300..518656) 1 NC_004545.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 518656 rpsM 1058635 rpsM Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S13 NP_778046.1 518300 R 224915 CDS NP_778047.1 27904921 1058637 complement(518799..518915) 1 NC_004545.1 COG0257; ribosomal protein II; ribosomal protein B; BL38; 50S ribosomal protein L36 518915 rpmJ 1058637 rpmJ Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L36 NP_778047.1 518799 R 224915 CDS NP_778048.1 27904922 1058445 complement(518944..520269) 1 NC_004545.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 520269 secY 1058445 secY Buchnera aphidicola str. Bp (Baizongia pistaciae) preprotein translocase subunit SecY NP_778048.1 518944 R 224915 CDS NP_778049.1 27904923 1058345 complement(520282..520725) 1 NC_004545.1 COG0200; 50S ribosomal protein L15 520725 rplO 1058345 rplO Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L15 NP_778049.1 520282 R 224915 CDS NP_778050.1 27904924 1058444 complement(520736..520912) 1 NC_004545.1 COG1841; 50S ribosomal protein L30 520912 rpmD 1058444 rpmD Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L30 NP_778050.1 520736 R 224915 CDS NP_778051.1 27904925 1058303 complement(520909..521466) 1 NC_004545.1 COG0098; BS5; 30S ribosomal protein S5 521466 rpsE 1058303 rpsE Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S5 NP_778051.1 520909 R 224915 CDS NP_778052.1 27904926 1058440 complement(521435..521800) 1 NC_004545.1 COG0256; 50S ribosomal protein L18 521800 rplR 1058440 rplR Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L18 NP_778052.1 521435 R 224915 CDS NP_778053.1 27904927 1058300 complement(521802..522341) 1 NC_004545.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 522341 rplF 1058300 rplF Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L6 NP_778053.1 521802 R 224915 CDS NP_778054.1 27904928 1058639 complement(522356..522748) 1 NC_004545.1 COG0096; BS8; 30S ribosomal protein S8 522748 rpsH 1058639 rpsH Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S8 NP_778054.1 522356 R 224915 CDS NP_778055.1 27904929 1058340 complement(522785..523090) 1 NC_004545.1 COG0199; 30S ribosomal protein S14 523090 rpsN 1058340 rpsN Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S14 NP_778055.1 522785 R 224915 CDS NP_778056.1 27904930 1058566 complement(523115..523654) 1 NC_004545.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 523654 rplE 1058566 rplE Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L5 NP_778056.1 523115 R 224915 CDS NP_778057.1 27904931 1058494 complement(523670..523984) 1 NC_004545.1 COG0198; ribosomal protein L24 523984 rplX 1058494 rplX Buchnera aphidicola str. Bp (Baizongia pistaciae) ribosomal protein L24 NP_778057.1 523670 R 224915 CDS NP_778058.1 27904932 1058344 complement(523997..524365) 1 NC_004545.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 524365 rplN 1058344 rplN Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L14 NP_778058.1 523997 R 224915 CDS NP_778059.1 27904933 1058496 complement(524521..524778) 1 NC_004545.1 COG0186; 30S ribosomal protein S17 524778 rpsQ 1058496 rpsQ Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S17 NP_778059.1 524521 R 224915 CDS NP_778060.1 27904934 1058518 complement(524771..524968) 1 NC_004545.1 COG0255; 50S ribosomal protein L29 524968 rpmC 1058518 rpmC Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L29 NP_778060.1 524771 R 224915 CDS NP_778061.1 27904935 1058307 complement(524968..525378) 1 NC_004545.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 525378 rplP 1058307 rplP Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L16 NP_778061.1 524968 R 224915 CDS NP_778062.1 27904936 1058306 complement(525391..526098) 1 NC_004545.1 COG0092; BS3; BS2; 30S ribosomal protein S3 526098 rpsC 1058306 rpsC Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S3 NP_778062.1 525391 R 224915 CDS NP_778063.1 27904937 1058640 complement(526104..526463) 1 NC_004545.1 COG0091; 50S ribosomal protein L22 526463 rplV 1058640 rplV Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L22 NP_778063.1 526104 R 224915 CDS NP_778064.1 27904938 1058330 complement(526490..526768) 1 NC_004545.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 526768 rpsS 1058330 rpsS Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S19 NP_778064.1 526490 R 224915 CDS NP_778065.1 27904939 1058310 complement(526788..527609) 1 NC_004545.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 527609 rplB 1058310 rplB Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L2 NP_778065.1 526788 R 224915 CDS NP_778066.1 27904940 1058644 complement(527650..527952) 1 NC_004545.1 COG0089; 50S ribosomal protein L23 527952 rplW 1058644 rplW Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L23 NP_778066.1 527650 R 224915 CDS NP_778067.1 27904941 1058495 complement(527964..528572) 1 NC_004545.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 528572 rplD 1058495 rplD Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L4 NP_778067.1 527964 R 224915 CDS NP_778068.1 27904942 1058641 complement(528574..529218) 1 NC_004545.1 COG0087; 50S ribosomal protein L3 529218 rplC 1058641 rplC Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L3 NP_778068.1 528574 R 224915 CDS NP_778069.1 27904943 1058308 complement(529254..529568) 1 NC_004545.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 529568 rpsJ 1058308 rpsJ Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S10 NP_778069.1 529254 R 224915 CDS NP_778070.1 27904944 1058448 complement(530062..531246) 1 NC_004545.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 531246 tuf 1058448 tuf Buchnera aphidicola str. Bp (Baizongia pistaciae) elongation factor Tu NP_778070.1 530062 R 224915 CDS NP_778071.1 27904945 1058313 complement(531310..533442) 1 NC_004545.1 COG0480; EF-G; elongation factor G 533442 fusA 1058313 fusA Buchnera aphidicola str. Bp (Baizongia pistaciae) elongation factor G NP_778071.1 531310 R 224915 CDS NP_778072.1 27904946 1058343 complement(533541..534011) 1 NC_004545.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 534011 rpsG 1058343 rpsG Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S7 NP_778072.1 533541 R 224915 CDS NP_778073.1 27904947 1058645 complement(534079..534450) 1 NC_004545.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 534450 rpsL 1058645 rpsL Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S12 NP_778073.1 534079 R 224915 CDS NP_778074.1 27904948 1058497 complement(534525..534812) 1 NC_004545.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB 534812 yheL 1058497 yheL Buchnera aphidicola str. Bp (Baizongia pistaciae) sulfur transfer complex subunit TusB NP_778074.1 534525 R 224915 CDS NP_778075.1 27904949 1058318 complement(534829..535188) 1 NC_004545.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC 535188 yheM 1058318 yheM Buchnera aphidicola str. Bp (Baizongia pistaciae) sulfur relay protein TusC NP_778075.1 534829 R 224915 CDS NP_778076.1 27904950 1058315 complement(535204..535596) 1 NC_004545.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD 535596 yheN 1058315 yheN Buchnera aphidicola str. Bp (Baizongia pistaciae) sulfur transfer complex subunit TusD NP_778076.1 535204 R 224915 CDS NP_778077.1 27904951 1058437 complement(535676..536431) 1 NC_004545.1 COG0545; PPiase; rotamase; FKBP-type peptidylprolyl isomerase 536431 fkpA 1058437 fkpA Buchnera aphidicola str. Bp (Baizongia pistaciae) FKBP-type peptidylprolyl isomerase NP_778077.1 535676 R 224915 CDS NP_778078.1 27904952 1058314 537013..538179 1 NC_004545.1 COG0477; hypothetical protein 538179 yhfC 1058314 yhfC Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778078.1 537013 D 224915 CDS NP_778079.1 27904953 1058311 complement(538176..539177) 1 NC_004545.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 539177 trpS 1058311 trpS Buchnera aphidicola str. Bp (Baizongia pistaciae) tryptophanyl-tRNA synthetase NP_778079.1 538176 R 224915 CDS NP_778080.1 27904954 1058498 complement(539308..539994) 1 NC_004545.1 COG0036; pentose-5-phosphate 3-epimerase; PPE; R5P3E; ribulose-phosphate 3-epimerase 539994 rpe 1058498 rpe Buchnera aphidicola str. Bp (Baizongia pistaciae) ribulose-phosphate 3-epimerase NP_778080.1 539308 R 224915 CDS NP_778081.1 27904955 1058319 complement(540099..541166) 1 NC_004545.1 COG0337; 3-dehydroquinate synthase 541166 aroB 1058319 aroB Buchnera aphidicola str. Bp (Baizongia pistaciae) 3-dehydroquinate synthase NP_778081.1 540099 R 224915 CDS NP_778082.1 27904956 1058337 complement(541217..541741) 1 NC_004545.1 COG0703; SK; shikimate kinase 541741 aroK 1058337 aroK Buchnera aphidicola str. Bp (Baizongia pistaciae) shikimate kinase NP_778082.1 541217 R 224915 CDS NP_778083.1 27904957 1058309 complement(542724..543440) 1 NC_004545.1 COG0813; inosine phosphorylase; PNP; purine nucleoside phosphorylase 543440 deoD 1058309 deoD Buchnera aphidicola str. Bp (Baizongia pistaciae) purine nucleoside phosphorylase NP_778083.1 542724 R 224915 CDS NP_778084.1 27904958 1058642 complement(543477..544703) 1 NC_004545.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 544703 deoB 1058642 deoB Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphopentomutase NP_778084.1 543477 R 224915 CDS NP_778085.1 27904959 1058317 complement(544861..546459) 1 NC_004545.1 COG0480; RF-3; peptide chain release factor 3 546459 prfC 1058317 prfC Buchnera aphidicola str. Bp (Baizongia pistaciae) peptide chain release factor 3 NP_778085.1 544861 R 224915 CDS NP_778086.1 27904960 1058499 complement(547566..548141) 1 NC_004545.1 COG0316; COG0694; hypothetical protein 548141 yhgI 1058499 yhgI Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778086.1 547566 R 224915 CDS NP_778087.1 27904961 1058338 548270..549067 1 NC_004545.1 COG0596; biotin biosynthesis protein 549067 bioH 1058338 bioH Buchnera aphidicola str. Bp (Baizongia pistaciae) biotin biosynthesis protein NP_778087.1 548270 D 224915 CDS NP_778088.1 27904962 1058648 complement(549120..549620) 1 NC_004545.1 COG0629; SSB; helix-destabilizing protein; single-strand binding protein 549620 ssb 1058648 ssb Buchnera aphidicola str. Bp (Baizongia pistaciae) single-strand binding protein NP_778088.1 549120 R 224915 CDS NP_778089.1 27904963 1058321 550628..552019 1 NC_004545.1 COG0305; replicative DNA helicase 552019 dnaB 1058321 dnaB Buchnera aphidicola str. Bp (Baizongia pistaciae) replicative DNA helicase NP_778089.1 550628 D 224915 CDS NP_778090.1 27904964 1058441 552392..553366 1 NC_004545.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 553366 gshB 1058441 gshB Buchnera aphidicola str. Bp (Baizongia pistaciae) glutathione synthetase NP_778090.1 552392 D 224915 CDS NP_778091.1 27904965 1058643 553464..554033 1 NC_004545.1 COG1678; hypothetical protein 554033 yqgE 1058643 yqgE Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778091.1 553464 D 224915 CDS NP_778092.1 27904966 1058336 554045..554458 1 NC_004545.1 COG0816; hypothetical protein 554458 yqgF 1058336 yqgF Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778092.1 554045 D 224915 CDS NP_778093.1 27904967 1058325 complement(554780..555952) 1 NC_004545.1 COG0119; 2-isopropylmalate synthase 555952 leuA 1058325 leuA Buchnera aphidicola str. Bp (Baizongia pistaciae) 2-isopropylmalate synthase NP_778093.1 554780 R 224915 CDS NP_778094.1 27904968 1058449 complement(556187..556792) 1 NC_004545.1 COG0066; isopropylmalate isomerase; alpha-IPM isomerase; IPMI; 3-isopropylmalate dehydratase small subunit 556792 leuD 1058449 leuD Buchnera aphidicola str. Bp (Baizongia pistaciae) 3-isopropylmalate dehydratase small subunit NP_778094.1 556187 R 224915 CDS NP_778095.1 27904969 1058646 complement(556816..558231) 1 NC_004545.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 558231 leuC 1058646 leuC Buchnera aphidicola str. Bp (Baizongia pistaciae) isopropylmalate isomerase large subunit NP_778095.1 556816 R 224915 CDS NP_778096.1 27904970 1058649 complement(558228..559328) 1 NC_004545.1 COG0473; beta-IPM dehydrogenase; IMDH; 3-IPM-DH; 3-isopropylmalate dehydrogenase 559328 leuB 1058649 leuB Buchnera aphidicola str. Bp (Baizongia pistaciae) 3-isopropylmalate dehydrogenase NP_778096.1 558228 R 224915 CDS NP_778097.1 27904971 1058316 559777..560448 1 NC_004545.1 COG0325; hypothetical protein 560448 yggS 1058316 yggS Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778097.1 559777 D 224915 CDS NP_778098.1 27904972 1058339 560559..561683 1 NC_004545.1 COG0635; oxidase 561683 yggW 1058339 yggW Buchnera aphidicola str. Bp (Baizongia pistaciae) oxidase NP_778098.1 560559 D 224915 CDS NP_778099.1 27904973 1058500 complement(561774..562502) 1 NC_004545.1 COG0220; methyltransferase 562502 yggH 1058500 yggH Buchnera aphidicola str. Bp (Baizongia pistaciae) methyltransferase NP_778099.1 561774 R 224915 CDS NP_778100.1 27904974 1058656 562662..563717 1 NC_004545.1 COG1194; A/G-specific adenine glycosylase 563717 mutY 1058656 mutY Buchnera aphidicola str. Bp (Baizongia pistaciae) A/G-specific adenine glycosylase NP_778100.1 562662 D 224915 CDS NP_778101.1 27904975 1058451 563710..563973 1 NC_004545.1 COG2924; hypothetical protein 563973 yggX 1058451 yggX Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778101.1 563710 D 224915 CDS NP_778102.1 27904976 1058653 564044..564835 1 NC_004545.1 COG0796; glutamate racemase 564835 murI 1058653 murI Buchnera aphidicola str. Bp (Baizongia pistaciae) glutamate racemase NP_778102.1 564044 D 224915 CDS NP_778103.1 27904977 1058323 complement(564892..566337) 1 NC_004545.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 566337 sbcB 1058323 sbcB Buchnera aphidicola str. Bp (Baizongia pistaciae) exonuclease I NP_778103.1 564892 R 224915 CDS NP_778104.1 27904978 1058502 566908..567528 1 NC_004545.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 567528 pyrE 1058502 pyrE Buchnera aphidicola str. Bp (Baizongia pistaciae) orotate phosphoribosyltransferase NP_778104.1 566908 D 224915 CDS NP_778105.1 27904979 1058326 complement(567550..568008) 1 NC_004545.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 568008 dut 1058326 dut Buchnera aphidicola str. Bp (Baizongia pistaciae) deoxyuridine 5'-triphosphate nucleotidohydrolase NP_778105.1 567550 R 224915 CDS NP_778106.1 27904980 1058651 complement(568911..569375) 1 NC_004545.1 COG0359; 50S ribosomal protein L9 569375 rplI 1058651 rplI Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L9 NP_778106.1 568911 R 224915 CDS NP_778107.1 27904981 1058201 complement(569416..569643) 1 NC_004545.1 COG0238; 30S ribosomal protein S18 569643 rpsR 1058201 rpsR Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S18 NP_778107.1 569416 R 224915 CDS NP_778108.1 27904982 1058453 complement(569763..570122) 1 NC_004545.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 570122 rpsF 1058453 rpsF Buchnera aphidicola str. Bp (Baizongia pistaciae) 30S ribosomal protein S6 NP_778108.1 569763 R 224915 CDS NP_778109.1 27904983 1058452 complement(570758..572047) 1 NC_004545.1 COG0104; IMP-aspartate ligase; ADSS; AMPSASE; adenylosuccinate synthetase 572047 purA 1058452 purA Buchnera aphidicola str. Bp (Baizongia pistaciae) adenylosuccinate synthetase NP_778109.1 570758 R 224915 CDS NP_778110.1 27904984 1058324 complement(572122..573102) 1 NC_004545.1 COG0330; hypothetical protein 573102 hflC 1058324 hflC Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778110.1 572122 R 224915 CDS NP_778111.1 27904985 1058657 complement(573106..574359) 1 NC_004545.1 COG0330; HflK 574359 hflK 1058657 hflK Buchnera aphidicola str. Bp (Baizongia pistaciae) HflK NP_778111.1 573106 R 224915 CDS NP_778112.1 27904986 1058320 complement(574629..575600) 1 NC_004545.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 575600 miaA 1058320 miaA Buchnera aphidicola str. Bp (Baizongia pistaciae) tRNA delta(2)-isopentenylpyrophosphate transferase NP_778112.1 574629 R 224915 CDS NP_778113.1 27904987 1058654 complement(575584..577377) 1 NC_004545.1 COG0323; DNA mismatch repair protein MutL 577377 mutL 1058654 mutL Buchnera aphidicola str. Bp (Baizongia pistaciae) DNA mismatch repair protein MutL NP_778113.1 575584 R 224915 CDS NP_778114.1 27904988 1058182 complement(577481..578653) 1 NC_004545.1 COG0246; mannitol-1-phosphate 5-dehydrogenase 578653 mtlD 1058182 mtlD Buchnera aphidicola str. Bp (Baizongia pistaciae) mannitol-1-phosphate 5-dehydrogenase NP_778114.1 577481 R 224915 CDS NP_778115.1 27904989 1058455 complement(578766..580688) 1 NC_004545.1 COG2213; COG1762; EIIABC-Mtl; mannitol- permease IIABC component; phosphotransferase enzyme II ABC component; EII-Mtl; PTS system mannitol-specific IIABC component 580688 mtlA 1058455 mtlA Buchnera aphidicola str. Bp (Baizongia pistaciae) PTS system mannitol-specific IIABC component NP_778115.1 578766 R 224915 CDS NP_778116.1 27904990 1058454 complement(581205..582863) 1 NC_004545.1 COG0166; GPI; phosphoglucose isomerase; PGI; phosphohexose isomerase; PHI; glucose-6-phosphate isomerase 582863 pgi 1058454 pgi Buchnera aphidicola str. Bp (Baizongia pistaciae) glucose-6-phosphate isomerase NP_778116.1 581205 R 224915 CDS NP_778117.1 27904991 1058652 583534..584016 1 NC_004545.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 584016 orn 1058652 orn Buchnera aphidicola str. Bp (Baizongia pistaciae) oligoribonuclease NP_778117.1 583534 D 224915 CDS NP_778118.1 27904992 1058322 584674..585327 1 NC_004545.1 COG0860; N-acetylmuramoyl-L-alanine amidase 585327 amiB 1058322 amiB Buchnera aphidicola str. Bp (Baizongia pistaciae) N-acetylmuramoyl-L-alanine amidase NP_778118.1 584674 D 224915 CDS NP_778119.1 27904993 1058327 complement(585580..585789) 1 NC_004545.1 COG0254; 50S ribosomal protein L31 585789 rpmE 1058327 rpmE Buchnera aphidicola str. Bp (Baizongia pistaciae) 50S ribosomal protein L31 NP_778119.1 585580 R 224915 CDS NP_778120.1 27904994 1058329 586694..587224 1 NC_004545.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 587224 hslV 1058329 hslV Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP-dependent protease peptidase subunit NP_778120.1 586694 D 224915 CDS NP_778121.1 27904995 1058658 587237..588571 1 NC_004545.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 588571 hslU 1058658 hslU Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP-dependent protease ATP-binding subunit HslU NP_778121.1 587237 D 224915 CDS NP_778122.1 27904996 1058501 complement(589033..589611) 1 NC_004545.1 COG0512; glutamine amido- transferase; anthranilate synthase component II 589611 trpG 1058501 trpG Buchnera aphidicola str. Bp (Baizongia pistaciae) anthranilate synthase component II NP_778122.1 589033 R 224915 CDS NP_778123.1 27904997 1058655 complement(589611..591179) 1 NC_004545.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 591179 trpE 1058655 trpE Buchnera aphidicola str. Bp (Baizongia pistaciae) anthranilate synthase component I NP_778123.1 589611 R 224915 CDS NP_778124.1 27904998 1058457 591689..592438 1 NC_004545.1 COG1018; FNR; flavodoxin reductase; FLXR; FLDR; ferredoxin-NADP reductase 592438 fpr 1058457 fpr Buchnera aphidicola str. Bp (Baizongia pistaciae) ferredoxin-NADP reductase NP_778124.1 591689 D 224915 CDS NP_778125.1 27904999 1058175 complement(592490..593458) 1 NC_004545.1 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 593458 yjeA 1058175 yjeA Buchnera aphidicola str. Bp (Baizongia pistaciae) lysyl-tRNA synthetase NP_778125.1 592490 R 224915 CDS NP_778126.1 27905000 1058450 complement(594006..595202) 1 NC_004545.1 hypothetical protein 595202 yba3 1058450 yba3 Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778126.1 594006 R 224915 CDS NP_778127.1 27905001 1058456 complement(595703..596131) 1 NC_004545.1 COG0589; universal stress protein 596131 uspA 1058456 uspA Buchnera aphidicola str. Bp (Baizongia pistaciae) universal stress protein NP_778127.1 595703 R 224915 CDS NP_778128.1 27905002 1058180 complement(596304..597803) 1 NC_004545.1 COG0306; phosphate transporter 597803 pitA 1058180 pitA Buchnera aphidicola str. Bp (Baizongia pistaciae) phosphate transporter NP_778128.1 596304 R 224915 CDS NP_778129.1 27905003 1058118 complement(598039..599250) 1 NC_004545.1 COG0477; transport protein 599250 ynfM 1058118 ynfM Buchnera aphidicola str. Bp (Baizongia pistaciae) transport protein NP_778129.1 598039 R 224915 CDS NP_778130.1 27905004 1058328 complement(599411..600271) 1 NC_004545.1 COG0253; DAP epimerase; diaminopimelate epimerase 600271 dapF 1058328 dapF Buchnera aphidicola str. Bp (Baizongia pistaciae) diaminopimelate epimerase NP_778130.1 599411 R 224915 CDS NP_778131.1 27905005 1058124 600492..600848 1 NC_004545.1 COG1965; CyaY 600848 cyaY 1058124 cyaY Buchnera aphidicola str. Bp (Baizongia pistaciae) CyaY NP_778131.1 600492 D 224915 CDS NP_778132.1 27905006 1058663 complement(601520..602779) 1 NC_004545.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 602779 rho 1058663 rho Buchnera aphidicola str. Bp (Baizongia pistaciae) transcription termination factor Rho NP_778132.1 601520 R 224915 CDS NP_778133.1 27905007 1058508 complement(603044..603373) 1 NC_004545.1 COG0526; TRX; thioredoxin 603373 trxA 1058508 trxA Buchnera aphidicola str. Bp (Baizongia pistaciae) thioredoxin NP_778133.1 603044 R 224915 CDS NP_778134.1 27905008 1058662 complement(603522..605534) 1 NC_004545.1 COG0210; ATP-dependent DNA helicase Rep 605534 rep 1058662 rep Buchnera aphidicola str. Bp (Baizongia pistaciae) ATP-dependent DNA helicase Rep NP_778134.1 603522 R 224915 CDS NP_778135.1 27905009 1058333 complement(605635..607110) 1 NC_004545.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 607110 ilvC 1058333 ilvC Buchnera aphidicola str. Bp (Baizongia pistaciae) ketol-acid reductoisomerase NP_778135.1 605635 R 224915 CDS NP_778136.1 27905010 1058331 complement(607185..609023) 1 NC_004545.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 609023 ilvD 1058331 ilvD Buchnera aphidicola str. Bp (Baizongia pistaciae) dihydroxy-acid dehydratase NP_778136.1 607185 R 224915 CDS NP_778137.1 27905011 1058661 609579..610793 1 NC_004545.1 COG1104; NifS-like protein; cysteine desulfurase 610793 nifS 1058661 nifS Buchnera aphidicola str. Bp (Baizongia pistaciae) cysteine desulfurase NP_778137.1 609579 D 224915 CDS NP_778138.1 27905012 1058660 610825..611205 1 NC_004545.1 COG0822; scaffold protein 611205 iscU 1058660 iscU Buchnera aphidicola str. Bp (Baizongia pistaciae) scaffold protein NP_778138.1 610825 D 224915 CDS NP_778139.1 27905013 1058123 611399..611908 1 NC_004545.1 COG1076; chaperone protein HscB 611908 hscB 1058123 hscB Buchnera aphidicola str. Bp (Baizongia pistaciae) chaperone protein HscB NP_778139.1 611399 D 224915 CDS NP_778140.1 27905014 1058664 611933..613468 1 NC_004545.1 COG0443; heat shock protein 70; heat shock protein; HSP70; chaperone protein HscA 613468 hscA 1058664 hscA Buchnera aphidicola str. Bp (Baizongia pistaciae) chaperone protein HscA NP_778140.1 611933 D 224915 CDS NP_778141.1 27905015 1058334 613586..613909 1 NC_004545.1 COG0633; ferredoxin 613909 fdx 1058334 fdx Buchnera aphidicola str. Bp (Baizongia pistaciae) ferredoxin NP_778141.1 613586 D 224915 CDS NP_778142.1 27905016 1058174 complement(613976..615364) 1 NC_004545.1 COG1160; GTP-binding protein 615364 engA 1058174 engA Buchnera aphidicola str. Bp (Baizongia pistaciae) GTP-binding protein NP_778142.1 613976 R 224915 CDS NP_778143.1 27905017 1058179 complement(615399..615980) 1 NC_004545.1 hypothetical protein 615980 yfgM 1058179 yfgM Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778143.1 615399 R 224915 CDS NP_778246.1 28191367 2648312 1..498 1 NC_004555.1 hypothetical protein 498 yqhA 2648312 yqhA Buchnera aphidicola str. Bp (Baizongia pistaciae) hypothetical protein NP_778246.1 1 D 224915 CDS NP_778247.1 28191368 2648313 564..1283 1 NC_004555.1 RepA2 protein 1283 repA2 2648313 repA2 Buchnera aphidicola str. Bp (Baizongia pistaciae) RepA2 protein NP_778247.1 564 D 224915 CDS NP_778248.1 28191366 2648311 1373..2230 1 NC_004555.1 RepA1 protein 2230 repA1 2648311 repA1 Buchnera aphidicola str. Bp (Baizongia pistaciae) RepA1 protein NP_778248.1 1373 D 224915 CDS