-- dump date 20140619_011846 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 224915000001 SEQ_END SEQ_END NC_004545.1 615980 615980 DR NC_004545.1; contig end 615980..615980 Buchnera aphidicola str. Bp (Baizongia pistaciae) 224915000002 SEQ_END SEQ_END NC_004555.1 2399 2399 DR NC_004555.1; contig end 2399..2399 Buchnera aphidicola str. Bp (Baizongia pistaciae) NP_777640.1 CDS gidA NC_004545.1 469 2349 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 469..2349 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058183 NP_777641.1 CDS atpB NC_004545.1 2668 3492 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 2668..3492 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058187 NP_777642.1 CDS atpE NC_004545.1 3545 3784 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 3545..3784 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058189 NP_777643.1 CDS atpF NC_004545.1 3909 4379 D COG0711; ATP synthase subunit B 3909..4379 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058389 NP_777644.1 CDS atpH NC_004545.1 4392 4928 D COG0712; ATP synthase subunit delta 4392..4928 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058515 NP_777645.1 CDS atpA NC_004545.1 4942 6486 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 4942..6486 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058523 NP_777646.1 CDS atpG NC_004545.1 6524 7399 D COG0224; ATP synthase gamma chain 6524..7399 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058528 NP_777647.1 CDS atpD NC_004545.1 7427 8824 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 7427..8824 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058529 NP_777648.1 CDS atpC NC_004545.1 8826 9263 D COG0355; ATP synthase subunit epsilon 8826..9263 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058530 NP_777649.1 CDS gyrB NC_004545.1 9397 11811 R COG0187; DNA gyrase subunit b complement(9397..11811) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058540 NP_777650.1 CDS dnaN NC_004545.1 11994 13109 R COG0592; DNA polymerase III beta chain complement(11994..13109) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058341 NP_777651.1 CDS dnaA NC_004545.1 13114 14487 R COG0593; chromosome replication initiator DnaA complement(13114..14487) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058526 NP_777652.1 CDS rpmH NC_004545.1 14903 15046 D COG0230; 50S ribosomal protein L34 14903..15046 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058388 NP_777653.1 CDS rnpA NC_004545.1 15067 15411 D COG0594; RNase P protein; protein C5; ribonuclease P protein component 15067..15411 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058533 NP_777654.1 CDS yidD NC_004545.1 15390 15647 D COG0759; hypothetical protein 15390..15647 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058531 NP_777655.1 CDS yidC NC_004545.1 15650 17260 D COG0706; hypothetical protein 15650..17260 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058375 NP_777656.1 CDS trmE NC_004545.1 17419 18798 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 17419..18798 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058347 NP_777657.1 CDS mutH NC_004545.1 18848 19510 D MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 18848..19510 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058369 NP_777658.1 CDS groES NC_004545.1 19865 20158 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 19865..20158 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058370 NP_777659.1 CDS groEL NC_004545.1 20209 21861 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 20209..21861 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058372 NP_777660.1 CDS yjeK NC_004545.1 21944 22966 R COG1509; aminomutase complement(21944..22966) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058374 NP_777661.1 CDS efp NC_004545.1 23004 23573 D COG0231; EF-P; elongation factor P 23004..23573 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058342 NP_777662.1 CDS dnaC NC_004545.1 23630 24370 R acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC complement(23630..24370) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058373 NP_777663.1 CDS yhhF NC_004545.1 24595 25185 R COG0742; methylase complement(24595..25185) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058366 NP_777664.1 CDS ftsY NC_004545.1 25316 26509 D COG0552; FtsY protei 25316..26509 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058353 NP_777665.1 CDS rpoH NC_004545.1 26669 27532 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 26669..27532 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058359 NP_777666.1 CDS glmS NC_004545.1 27630 29462 R COG0449; hexosephosphate aminotransferase; D-fructose-6- phosphate amidotransferase; GFAT; L-glutamine-D-fructose-6-phosphate amidotransferase; glucosamine-6-phosphate synthase; glucosamine-fructose-6-phosphate aminotransferase isomerizing complement(27630..29462) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058365 NP_777667.1 CDS glmU NC_004545.1 29548 30894 R COG1207; N-acetylglucosamine-1-phosphate uridyltransferase; UDP-N-acetylglucosamine pyrophosphorylase complement(29548..30894) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058362 NP_777668.1 CDS yigL NC_004545.1 31189 31992 D COG0561; YigL; haloacid dehalogenase-like hydrolase 31189..31992 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058355 NP_777669.1 CDS metE NC_004545.1 32186 34456 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 32186..34456 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058349 NP_777670.1 CDS purH NC_004545.1 35810 37420 R COG0138; bifunctional purine biosynthesis protein PurH; AICAR transformylase; inosinicase; IMP synthetase; ATIC; phosphoribosylaminoimidazolecarboxamide formyltransferase complement(35810..37420) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058351 NP_777671.1 CDS hupA NC_004545.1 37493 37771 R COG0776; DNA-binding protein II; HB; DNA-binding protein HU complement(37493..37771) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058507 NP_777672.1 CDS rpoC NC_004545.1 38178 42392 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(38178..42392) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058521 NP_777673.1 CDS rpoB NC_004545.1 42481 46512 R COG0085; transcriptase beta chain; RNA polymerase beta subunit; DNA-directed RNA polymerase beta chain complement(42481..46512) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058520 NP_777674.1 CDS rplL NC_004545.1 46740 47108 R COG0222; L8; 50S ribosomal protein L7/L12 complement(46740..47108) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058186 NP_777675.1 CDS rplJ NC_004545.1 47182 47688 R COG0244; L8; 50S ribosomal protein L10 complement(47182..47688) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058537 NP_777676.1 CDS rplA NC_004545.1 47970 48671 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(47970..48671) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058184 NP_777677.1 CDS rplK NC_004545.1 48668 49108 R COG0080; L11 protein; 50S ribosomal protein L11 complement(48668..49108) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058535 NP_777678.1 CDS nusG NC_004545.1 49323 49868 R COG0250; transcription antitermination protein complement(49323..49868) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058538 NP_777679.1 CDS secE NC_004545.1 49873 50256 R COG0690; preprotein translocase SecE subunit complement(49873..50256) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058527 NP_777680.1 CDS murB NC_004545.1 51395 52399 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(51395..52399) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058361 NP_777681.1 CDS metF NC_004545.1 52577 53464 D MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 52577..53464 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058532 NP_777682.1 CDS argG NC_004545.1 53764 54993 D catalyzes ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate; argininosuccinate synthase 53764..54993 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058536 NP_777683.1 CDS argH NC_004545.1 55107 56483 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 55107..56483 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058128 NP_777684.1 CDS yibN NC_004545.1 56667 57110 D COG0607; hypothetical protein 56667..57110 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058525 NP_777685.1 CDS cysE NC_004545.1 57358 58122 D COG1045; SAT; serine acetyltransferase 57358..58122 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058156 NP_777686.1 CDS rpoD NC_004545.1 58313 60142 R COG0568; sigma-70; RNA polymerase sigma factor RpoD complement(58313..60142) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058190 NP_777687.1 CDS dnaG NC_004545.1 60380 62116 R COG0358; DNA primase complement(60380..62116) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058193 NP_777688.1 CDS rpsU NC_004545.1 62223 62438 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(62223..62438) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058132 NP_777689.1 CDS gcp NC_004545.1 62606 63622 D COG0533; glycoprotease; O-sialoglycoprotein endopeptidase 62606..63622 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058516 NP_777690.1 CDS ribB NC_004545.1 63734 64369 R COG0108; DHBP synthase; LuxH protein; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(63734..64369) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058191 NP_777691.1 CDS cca NC_004545.1 64717 65976 D catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase 64717..65976 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058541 NP_777692.1 CDS bacA NC_004545.1 65973 66779 R COG1968; undecaprenol kinase; bacitracin resistance protein complement(65973..66779) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058524 NP_777693.1 CDS crr NC_004545.1 66905 67411 R functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter subunit complement(66905..67411) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058152 NP_777694.1 CDS ptsI NC_004545.1 67420 69150 R Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase complement(67420..69150) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058192 NP_777695.1 CDS ptsH NC_004545.1 69325 69582 R COG1925; histidine-containing protein; phosphocarrier protein HPr complement(69325..69582) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058194 NP_777696.1 CDS lig NC_004545.1 71142 73160 D COG0272; polydeoxyribonucleotide synthase NAD+; DNA ligase 71142..73160 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058542 NP_777697.1 CDS gltX NC_004545.1 73495 74913 D COG0008; glutamate-tRNA ligase; GluRS; glutamyl-tRNA synthetase 73495..74913 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058176 NP_777698.1 CDS fliE NC_004545.1 75190 75492 R COG1677; flagellar hook-basal body complex protein FliE complement(75190..75492) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058198 NP_777699.1 CDS fliF NC_004545.1 75688 77355 D COG1766; flagellar M-ring protein 75688..77355 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058522 NP_777700.1 CDS fliG NC_004545.1 77360 78322 D COG1536; flagellar motor switch protein FliG 77360..78322 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058544 NP_777701.1 CDS fliH NC_004545.1 78353 79030 D COG1317; flagellar assembly protein FliH 78353..79030 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058258 NP_777702.1 CDS fliI NC_004545.1 79027 80391 D COG1157; flagellum-specific ATP synthase 79027..80391 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058209 NP_777703.1 CDS fliJ NC_004545.1 80408 80875 D COG2882; flagellar FliJ protein 80408..80875 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058195 NP_777704.1 CDS fliK NC_004545.1 80868 81938 D COG3144; flagellar FliK protein 80868..81938 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058205 NP_777705.1 CDS fliM NC_004545.1 82082 83077 D COG1868; flagellar motor switch protein FliM 82082..83077 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058545 NP_777706.1 CDS fliN NC_004545.1 83070 83474 D COG1886; flagellar motor switch protein FliN 83070..83474 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058506 NP_777707.1 CDS fliOP NC_004545.1 83536 84618 D COG1338; bifunctional flagellar biosynthesis protein FliO/FliP 83536..84618 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058188 NP_777708.1 CDS fliQ NC_004545.1 84702 84974 D COG1987; flagellar biosynthetic protein MopD; flagellar biosynthetic protein FliQ 84702..84974 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058199 NP_777709.1 CDS fliR NC_004545.1 84974 85747 D COG1684; flagellar biosynthetic protein MopE; flagellar biosynthetic protein FliR 84974..85747 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058546 NP_777710.1 CDS rpmG NC_004545.1 86140 86307 R COG0267; 50S ribosomal protein L33 complement(86140..86307) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058539 NP_777711.1 CDS rpmB NC_004545.1 86349 86573 R COG0227; 50S ribosomal protein L28 complement(86349..86573) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058197 NP_777712.1 CDS ytfN NC_004545.1 86752 88905 D COG2911; RpoD protein 86752..88905 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058548 NP_777713.1 CDS ppa NC_004545.1 89898 90425 R COG0221; pyrophosphate phospho-hydrolase; PPase; inorganic pyrophosphatase complement(89898..90425) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058391 NP_777714.1 CDS pmbA NC_004545.1 90540 91886 D COG0312; TldE protein; PmbA protein 90540..91886 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058549 NP_777715.1 CDS yraL NC_004545.1 92362 93240 R COG0313; tetrapyrrole methylase complement(92362..93240) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058200 NP_777716.1 CDS fabB NC_004545.1 93527 94750 D COG0304; beta-ketoacyl-ACP synthase I; KAS I; 3-oxoacyl-ACP synthase 93527..94750 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058210 NP_777717.1 CDS talA NC_004545.1 95374 96324 D Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase 95374..96324 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058172 NP_777718.1 CDS tktB NC_004545.1 96422 98422 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 96422..98422 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058173 NP_777719.1 CDS dapE NC_004545.1 98589 99722 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 98589..99722 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058547 NP_777720.1 CDS dapA NC_004545.1 100159 101043 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(100159..101043) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058177 NP_777721.1 CDS aroC NC_004545.1 101526 102593 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(101526..102593) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058553 NP_777722.1 CDS yb2331 NC_004545.1 102976 103506 D COG2840; hypothetical protein 102976..103506 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058390 NP_777723.1 CDS hisG NC_004545.1 103996 104895 D long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 103996..104895 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058396 NP_777724.1 CDS hisD NC_004545.1 104901 106208 D COG0141; HDH; histidinol dehydrogenase 104901..106208 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058171 NP_777725.1 CDS hisC NC_004545.1 106210 107292 D COG0079; imidazole; histidinol-phosphate aminotransferase 106210..107292 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058203 NP_777726.1 CDS hisB NC_004545.1 107294 108367 D catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 107294..108367 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058394 NP_777727.1 CDS hisH NC_004545.1 108368 108958 D COG0118; amidotransferase HisH 108368..108958 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058555 NP_777728.1 CDS hisA NC_004545.1 108962 109687 D COG0106; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 108962..109687 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058178 NP_777729.1 CDS hisF NC_004545.1 109681 110457 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 109681..110457 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058204 NP_777730.1 CDS hisI NC_004545.1 110451 111071 D COG0139; COG0140; histidine biosynthesis bifunctional protein HisIE; PRA-CH; PRA-PH; phosphoribosyl-AMP cyclohydrolase 110451..111071 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058395 NP_777731.1 CDS gnd NC_004545.1 111225 112631 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 111225..112631 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058155 NP_777732.1 CDS dcd NC_004545.1 112936 113517 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 112936..113517 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058552 NP_777733.1 CDS metG NC_004545.1 113619 115256 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 113619..115256 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058207 NP_777734.1 CDS mesJ NC_004545.1 115306 116622 R COG0037; cell cycle protein MesJ complement(115306..116622) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058556 NP_777735.1 CDS norM NC_004545.1 116861 118216 R COG0534; Na+ drug antiporter; multidrug-efflux transporter; multidrug resistance protein NorM complement(116861..118216) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058557 NP_777736.1 CDS ribE NC_004545.1 118530 119168 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 118530..119168 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058211 NP_777737.1 CDS rnfA NC_004545.1 119467 120051 D COG2209; nitrogen fixation protein RnfA; electron transport complex protein RnfA 119467..120051 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058393 NP_777738.1 CDS rnfB NC_004545.1 120063 120572 D COG2878; electron transport complex protein RnfB 120063..120572 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058376 NP_777739.1 CDS rnfC NC_004545.1 120590 122107 D COG1726; electron transport complex protein RnfC 120590..122107 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058558 NP_777740.1 CDS rnfD NC_004545.1 122275 123339 D COG1805; nitrogen fixation protein RnfD; electron transport complex protein RnfD 122275..123339 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058170 NP_777741.1 CDS rnfG NC_004545.1 123323 123973 D COG2869; Nitrogen fixation protein RnfG; electron transport complex protein RnfG 123323..123973 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058196 NP_777742.1 CDS ydgQ NC_004545.1 123966 124691 D in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex RsxE subunit 123966..124691 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058158 NP_777743.1 CDS nth NC_004545.1 124654 125301 D COG0177; endonuclease III 124654..125301 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058503 NP_777744.1 CDS tyrS NC_004545.1 125590 126864 D COG0162; tyrosine-tRNA ligase; TyrRS; tyrosyl-tRNA synthetase 125590..126864 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058154 NP_777745.1 CDS ydiC NC_004545.1 126931 127317 R COG0316; hypothetical protein complement(126931..127317) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058397 NP_777746.1 CDS yb1688 NC_004545.1 127799 128905 D YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; inner membrane protein 127799..128905 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058517 NP_777747.1 CDS aroH NC_004545.1 129441 130487 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 129441..130487 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058216 NP_777748.1 CDS thrS NC_004545.1 130663 132594 D COG0441; threonine-tRNA ligase; ThrRS; threonyl-tRNA synthetase 130663..132594 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058223 NP_777749.1 CDS infC NC_004545.1 132598 133143 D COG0290; translation initiation factor IF-3 132598..133143 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058559 NP_777750.1 CDS rpmI NC_004545.1 133189 133386 D COG0291; ribosomal protein A; 50S ribosomal protein L35 133189..133386 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058571 NP_777751.1 CDS rplT NC_004545.1 133429 133809 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 133429..133809 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058215 NP_777752.1 CDS pheS NC_004545.1 133982 134968 D COG0016; phenylalanine-tRNA ligase alpha chain; PheRS; phenylalanyl-tRNA synthetase alpha chain 133982..134968 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058469 NP_777753.1 CDS pheT NC_004545.1 134983 137391 D COG0073; COG0072; phenylalanine-tRNA ligase beta chain; PheRS; phenylalanyl-tRNA synthetase beta chain 134983..137391 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058510 NP_777754.1 CDS yajC NC_004545.1 137603 137950 D COG1862; membrane protein YajC 137603..137950 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058467 NP_777755.1 CDS glyS NC_004545.1 138135 140228 R COG0751; glycyl-tRNA synthetase beta chain (glycine--tRNA ligase beta chain) (GlyRS) complement(138135..140228) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058157 NP_777756.1 CDS glyQ NC_004545.1 140274 141176 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(140274..141176) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058130 NP_777757.1 CDS nfo NC_004545.1 141478 142314 D Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 141478..142314 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058127 NP_777758.1 CDS rplY NC_004545.1 142440 142733 D COG1825; 50S ribosomal protein L25 142440..142733 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058398 NP_777759.1 CDS yabI NC_004545.1 142971 143744 R COG0586; DedA family membrane protein complement(142971..143744) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058212 NP_777760.1 CDS ksgA NC_004545.1 144271 145053 D COG0030; S-adenosylmethionine-6-N', N'-adenosyl rRNA dimethyltransferase; 16S rRNA dimethylase; high level kasugamycin resistance protein ksgA; kasugamycin dimethyltransferase; dimethyladenosine transferase 144271..145053 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058213 NP_777761.1 CDS apaH NC_004545.1 145169 146005 D hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 145169..146005 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058166 NP_777762.1 CDS folA NC_004545.1 146011 146505 R COG0262; dihydrofolate reductase complement(146011..146505) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058169 NP_777763.1 CDS carB NC_004545.1 146590 149820 R COG0458; carbamoyl- phosphate synthase (ammonia); carbamoyl-phosphate synthetase (ammonia); carbamoyl-phosphate synthetase I; carbon-dioxide-ammonia ligase; CARB; carbamoyl phosphate synthetase large chain complement(146590..149820) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058381 NP_777764.1 CDS carA NC_004545.1 149829 151022 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(149829..151022) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058148 NP_777765.1 CDS dapB NC_004545.1 151161 151979 R COG0289; DHPR; dihydrodipicolinate reductase complement(151161..151979) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058206 NP_777766.1 CDS lytB NC_004545.1 152274 152939 R COG0761; LytB protein complement(152274..152939) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058554 NP_777767.1 CDS lspA NC_004545.1 152995 153486 R COG0597; prolipoprotein signal peptidase; signal peptidase II; SPase II; lipoprotein signal peptidase complement(152995..153486) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058168 NP_777768.1 CDS ileS NC_004545.1 153486 156305 R COG0060; isoleucine-tRNA ligase; IleRS; isoleucyl-tRNA synthetase complement(153486..156305) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058147 NP_777769.1 CDS rpsT NC_004545.1 156975 157235 D COG0268; 30S ribosomal protein S20 156975..157235 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058225 NP_777770.1 CDS dnaJ NC_004545.1 157317 158468 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ complement(157317..158468) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058563 NP_777771.1 CDS dnaK NC_004545.1 158590 160506 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(158590..160506) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058565 NP_777772.1 CDS nuoA NC_004545.1 160780 161178 D COG0838; NADH-ubiquinone oxidoreductase chain A; Nuo1; NADH dehydrogenase I chain A 160780..161178 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058564 NP_777773.1 CDS nuoB NC_004545.1 161204 161872 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 161204..161872 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058400 NP_777774.1 CDS nuoCD NC_004545.1 161977 163770 D NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 161977..163770 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058218 NP_777775.1 CDS nuoE NC_004545.1 163757 164272 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 163757..164272 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058224 NP_777776.1 CDS nuoF NC_004545.1 164269 165603 D COG1894; NADH-ubiquinone oxidoreductase chain 6; Nuo6; NADH dehydrogenase I chain F 164269..165603 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058163 NP_777777.1 CDS nuoG NC_004545.1 165732 168455 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 165732..168455 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058511 NP_777778.1 CDS nuoH NC_004545.1 168452 169420 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 168452..169420 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058116 NP_777779.1 CDS nuoI NC_004545.1 169443 169985 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 169443..169985 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058167 NP_777780.1 CDS nuoJ NC_004545.1 169996 170490 D COG0839; NADH-ubiquinone oxidoreductase chain J; Nuo10; NADH dehydrogenase I chain J 169996..170490 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058217 NP_777781.1 CDS nuoK NC_004545.1 170548 170850 D COG0713; NADH-ubiquinone oxidoreductase chain K; Nuo11; NADH dehydrogenase I chain K 170548..170850 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058164 NP_777782.1 CDS nuoL NC_004545.1 170847 172712 D COG1009; NADH-ubiquinone oxidoreductase chain L; Nuo12; NADH dehydrogenase I chain L 170847..172712 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058569 NP_777783.1 CDS nuoM NC_004545.1 172823 174349 D COG1008; NADH dehydrogenase subunit 4 172823..174349 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058165 NP_777784.1 CDS nuoN NC_004545.1 174371 175855 D COG1007; NADH dehydrogenase (ubiquinone); ubiquinone reductase; type I dehydrogenase; complex I dehydrogenase; NADH dehydrogenase subunit 2 174371..175855 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058222 NP_777785.1 CDS ygjT NC_004545.1 175946 176911 D COG0861; transport protein 175946..176911 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058561 NP_777786.1 CDS folC NC_004545.1 176994 178274 D COG0285; FolC bifunctional protein; folylpoly-gamma-glutamate synthetase; FPGS; folylpolyglutamate synthase 176994..178274 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058567 NP_777787.1 CDS cvpA NC_004545.1 178315 178800 D COG1286; colicin V production-like protein 178315..178800 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058399 NP_777788.1 CDS prsA NC_004545.1 178982 179929 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(178982..179929) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058575 NP_777789.1 CDS prfA NC_004545.1 181702 182790 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 181702..182790 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058129 NP_777790.1 CDS hemK NC_004545.1 182787 183620 D COG2890; M.BusHemKP; hypothetical protein 182787..183620 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058149 NP_777791.1 CDS ychA NC_004545.1 183795 184604 D COG2912; transcriptional regulator 183795..184604 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058220 NP_777792.1 CDS ackA NC_004545.1 185121 186323 D COG0282; Acetokinase; acetate kinase 185121..186323 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058568 NP_777793.1 CDS pta NC_004545.1 186377 188524 D COG0857; COG0280; phosphotransacetylase; phosphate acetyltransferase 186377..188524 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058580 NP_777794.1 CDS yfaE NC_004545.1 188615 188878 R COG0633; ferredoxin; iron-sulphur binding protein complement(188615..188878) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058146 NP_777795.1 CDS nrdB NC_004545.1 188879 190009 R B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta complement(188879..190009) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058229 NP_777796.1 CDS nrdA NC_004545.1 190074 192359 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(190074..192359) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058219 NP_777797.1 CDS gyrA NC_004545.1 192634 195177 R COG0188; DNA gyrase subunit A complement(192634..195177) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058401 NP_777798.1 CDS yba2 NC_004545.1 195718 196557 D COG3416; hypothetical protein 195718..196557 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058576 NP_777799.1 CDS ahpC NC_004545.1 196716 197315 R COG0450; thioredoxin peroxidase 1; thioredoxin-dependent peroxide reductase 1; thiol-specific antioxidant protein; TSA; PRP; natural killer cell enhancing factor B; NKEF-B; peroxiredoxin 2 complement(196716..197315) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058162 NP_777800.1 CDS ung NC_004545.1 197551 198225 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 197551..198225 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058231 NP_777801.1 CDS grpE NC_004545.1 198306 198890 R COG0576; Hsp-70 cofactor 2; heat shock protein GrpE complement(198306..198890) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058221 NP_777802.1 CDS ppnK NC_004545.1 199004 199882 D COG0061; poly(P)/ATP NAD kinase; inorganic polyphosphate/ATP-NAD kinase 199004..199882 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058228 NP_777803.1 CDS ydhD NC_004545.1 200435 200761 D COG0278; thioredoxin-like protein 2 200435..200761 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058138 NP_777804.1 CDS rnt NC_004545.1 200826 201479 R Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T complement(200826..201479) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058161 NP_777805.1 CDS sodA NC_004545.1 201679 202305 D COG0605; superoxide dismutase SodA; superoxide dismutase 201679..202305 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058464 NP_777806.1 CDS pth NC_004545.1 202401 203024 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 202401..203024 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058578 NP_777807.1 CDS ychF NC_004545.1 203069 204160 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 203069..204160 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058574 NP_777808.1 CDS thrC NC_004545.1 204244 205536 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(204244..205536) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058160 NP_777809.1 CDS thrB NC_004545.1 205537 206469 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(205537..206469) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058383 NP_777810.1 CDS thrA NC_004545.1 206489 208939 R multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homeserine dehydrogenase I complement(206489..208939) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058230 NP_777811.1 CDS dksA NC_004545.1 209657 210112 R COG1734; DnaK suppressor protein complement(209657..210112) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058581 NP_777812.1 CDS truA NC_004545.1 210481 211275 D COG0101; tRNA pseudouridine synthase A 210481..211275 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058577 NP_777813.1 CDS mrcB NC_004545.1 211524 213749 D bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; penicillin-binding protein 1b 211524..213749 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058232 NP_777814.1 CDS secA NC_004545.1 214226 216778 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 214226..216778 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058579 NP_777815.1 CDS guaC NC_004545.1 217697 218752 D catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 217697..218752 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058572 NP_777816.1 CDS aceE NC_004545.1 219162 221825 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 219162..221825 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058233 NP_777817.1 CDS aceF NC_004545.1 221836 223086 D COG0508; E2; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 221836..223086 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058122 NP_777818.1 CDS lpdA NC_004545.1 223234 224661 D COG1249; lipoamide reductase [NADH]; E3 component of alpha-ketoacid dehydrogenase complexes; lipoyl dehydrogenase; dihydrolipoyl dehydrogenase; diaphorase; dihydrolipoamide dehydrogenase 223234..224661 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058236 NP_777819.1 CDS pfs NC_004545.1 224733 225491 R COG0775; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(224733..225491) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058386 NP_777820.1 CDS yadR NC_004545.1 225530 225877 R COG0316; HesB/YadR/YfhF family protein complement(225530..225877) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058133 NP_777821.1 CDS ftsZ NC_004545.1 225983 227140 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(225983..227140) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058227 NP_777822.1 CDS ftsA NC_004545.1 227173 228438 R COG0849; cell division protein FtsA complement(227173..228438) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058403 NP_777823.1 CDS ddl NC_004545.1 228840 229769 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(228840..229769) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058244 NP_777824.1 CDS murC NC_004545.1 229771 231231 R COG0773; UDP-N-acetylmuramoyl-L-alanine synthetase; UDP-N-acetylmuramate-alanine ligase complement(229771..231231) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058586 NP_777825.1 CDS murG NC_004545.1 231269 232330 R COG0707; undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; UDP-N-acetylglucosamine-N-acetylmuramyl- pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase complement(231269..232330) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058159 NP_777826.1 CDS ftsW NC_004545.1 232327 233469 R COG0772; cell division protein FtsW complement(232327..233469) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058134 NP_777827.1 CDS murD NC_004545.1 233524 234852 R COG0771; UDP-N- acetylmuramoyl-L-alanyl-D-glutamate synthetase; D-glutamic acid adding enzyme; UDP-N-acetylmuramoylalanine-D-glutamate ligase complement(233524..234852) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058151 NP_777828.1 CDS mraY NC_004545.1 234849 235871 R COG0472; UDP-MurNAc-pentapeptide phosphotransferase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(234849..235871) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058582 NP_777829.1 CDS murF NC_004545.1 235938 237320 R COG0770; UDP-MurNAc-pentapeptide synthetase; D-alanyl-D-alanine-adding enzyme; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D- alanyl ligase complement(235938..237320) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058402 NP_777830.1 CDS murE NC_004545.1 237307 238833 R COG0769; UDP-N-acetylmuramyl-tripeptide synthetase; meso-diaminopimelate-adding enzyme; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase complement(237307..238833) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058584 NP_777831.1 CDS ftsI NC_004545.1 238874 240604 R COG0768; penicillin-binding protein 3; PBP-3; peptidoglycan synthetase FtsI complement(238874..240604) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058119 NP_777832.1 CDS ftsL NC_004545.1 240687 240938 R COG3116; cell division protein FtsL-like protein complement(240687..240938) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058356 NP_777833.1 CDS yabC NC_004545.1 240931 241878 R COG0275; methyltransferase; hypothetical protein complement(240931..241878) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058405 NP_777834.1 CDS ilvH NC_004545.1 241972 242451 R COG0440; AHAS; acetohydroxy-acid synthase small subunit; ALS; acetolactate synthase small subunit complement(241972..242451) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058234 NP_777835.1 CDS ilvI NC_004545.1 242448 244178 R COG0028; AHAS; acetohydroxy-acid synthase large subunit; ALS; acetolactate synthase large subunit complement(242448..244178) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058120 NP_777836.1 CDS apbE NC_004545.1 244469 245494 R COG1477; thiamine biosynthesis protein ApbE precursor complement(244469..245494) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058407 NP_777837.1 CDS htrA NC_004545.1 245995 247392 D COG0265; protease DO; serine protease 245995..247392 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058427 NP_777838.1 CDS dapD NC_004545.1 247523 248347 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(247523..248347) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058504 NP_777839.1 CDS map NC_004545.1 248425 249225 R COG0024; MAP; peptidase M; methionine aminopeptidase complement(248425..249225) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058483 NP_777840.1 CDS rpsB NC_004545.1 249579 250265 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 249579..250265 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058237 NP_777841.1 CDS tsf NC_004545.1 250352 251152 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 250352..251152 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058435 NP_777842.1 CDS pyrH NC_004545.1 251299 252027 D COG0528; UK; uridine monophosphate kinase; UMP kinase; SMBA protein; uridylate kinase 251299..252027 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058121 NP_777843.1 CDS frr NC_004545.1 252164 252715 D COG0233; ribosome releasing factor; RRF; ribosome recycling factor 252164..252715 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058153 NP_777844.1 CDS uppS NC_004545.1 253985 254740 D COG0020; UPP synthetase; di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase; UDS; undecaprenyl pyrophosphate synthetase 253985..254740 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058458 NP_777845.1 CDS fabZ NC_004545.1 255146 255598 D COG0764; (3R)-hydroxymyristoyl ACP dehydrase; (3R)-hydroxymyristoyl-ACP dehydratase 255146..255598 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058587 NP_777846.1 CDS dnaE NC_004545.1 255887 259120 D COG0587; DNA polymerase III alpha subunit 255887..259120 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058588 NP_777847.1 CDS proS NC_004545.1 259265 260989 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(259265..260989) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058404 NP_777848.1 CDS flhB NC_004545.1 261394 262542 D COG1377; flagellar biosynthetic protein FlhB 261394..262542 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058470 NP_777849.1 CDS flhA NC_004545.1 262535 264643 D COG1298; flagellar biosynthesis protein FlhA 262535..264643 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058238 NP_777850.1 CDS argS NC_004545.1 264814 266550 R COG0018; arginine-tRNA ligase; ARGRS; arginyl-tRNA synthetase complement(264814..266550) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058239 NP_777851.1 CDS gloB NC_004545.1 268750 269499 R COG0491; glyoxalase II; Glx II; hydroxyacylglutathione hydrolase complement(268750..269499) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058583 NP_777852.1 CDS rnhA NC_004545.1 269553 270014 R COG0328; RNase HI; ribonuclease H; RNase H; ribonuclease HI complement(269553..270014) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058471 NP_777853.1 CDS dnaQ NC_004545.1 270064 270801 D COG0847; DNA polymerase III epsilon chain 270064..270801 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058477 NP_777854.1 CDS gpt NC_004545.1 271229 271690 D catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 271229..271690 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058241 NP_777855.1 CDS grpE1 NC_004545.1 271815 272411 D COG0576; HSP-70 cofactor; heat shock protein GrpE 271815..272411 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058235 NP_777856.1 CDS yfjF NC_004545.1 272425 272685 R COG2914; hypothetical protein complement(272425..272685) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058208 NP_777857.1 CDS smpB NC_004545.1 272836 273312 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 272836..273312 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058591 NP_777858.1 CDS yfhC NC_004545.1 273380 273868 D COG0590; deaminase 273380..273868 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058245 NP_777859.1 CDS acpS NC_004545.1 273933 274319 R COG0736; holo-ACP synthase; holo-ACP synthase complement(273933..274319) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058585 NP_777860.1 CDS era NC_004545.1 274316 275179 R COG1159; bex protein; GTP-binding protein Era complement(274316..275179) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058589 NP_777861.1 CDS rnc NC_004545.1 275176 275856 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(275176..275856) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058150 NP_777862.1 CDS lepB NC_004545.1 275957 276889 R COG0681; SPase I; leader peptidase I; signal peptidase I complement(275957..276889) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058242 NP_777863.1 CDS lepA NC_004545.1 276925 278712 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(276925..278712) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058408 NP_777864.1 CDS mnmA NC_004545.1 279218 280330 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 279218..280330 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058460 NP_777865.1 CDS ycfC NC_004545.1 280403 281032 D HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 280403..281032 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058593 NP_777866.1 CDS purB NC_004545.1 281074 282456 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 281074..282456 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058247 NP_777867.1 CDS mltE NC_004545.1 282568 283206 D COG0741; murein hydrolase E; membrane-bound lytic murein transglycosylase E 282568..283206 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058594 NP_777868.1 CDS fabI NC_004545.1 283259 284083 D COG0623; NADH- dependent enoyl-ACP reductase; cold-shock induced protein 15; CSI15; vegetative protein 241; VEG241; enoyl-ACP reductase 283259..284083 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058250 NP_777869.1 CDS rnb NC_004545.1 284191 286131 D Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 284191..286131 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058360 NP_777870.1 CDS ychE NC_004545.1 286404 287051 D COG2095; hypothetical protein 286404..287051 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058226 NP_777871.1 CDS lipB NC_004545.1 287195 287806 D COG0321; lipoate biosynthesis protein B; lipoate-protein ligase B 287195..287806 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058410 NP_777872.1 CDS lipA NC_004545.1 287938 288882 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 287938..288882 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058560 NP_777873.1 CDS pyrF NC_004545.1 288954 289664 R COG0284; OMP decarboxylase; OMPDCASE; orotidine 5'-phosphate decarboxylase complement(288954..289664) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058214 NP_777874.1 CDS ribA NC_004545.1 289913 290512 D catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 289913..290512 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058597 NP_777875.1 CDS cls NC_004545.1 291112 292584 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(291112..292584) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058248 NP_777876.1 CDS yciA NC_004545.1 292797 293204 R COG1607; P14 protein; acyl-CoA thioester hydrolase YciA complement(292797..293204) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058598 NP_777877.1 CDS ispZ NC_004545.1 293260 293796 R COG2917; intracellular septation protein complement(293260..293796) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058409 NP_777878.1 CDS yciC NC_004545.1 293820 294572 R hypothetical protein complement(293820..294572) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058246 NP_777879.1 CDS trpA NC_004545.1 294709 295518 R COG0159; tryptophan synthase subunit alpha complement(294709..295518) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058592 NP_777880.1 CDS trpB NC_004545.1 295523 296707 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(295523..296707) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058254 NP_777881.1 CDS trpC NC_004545.1 296707 298116 R monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(296707..298116) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058465 NP_777882.1 CDS trpD NC_004545.1 298131 299126 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(298131..299126) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058570 NP_777883.1 CDS yciL NC_004545.1 300608 301351 D COG1187; pseudouridylate synthase; uracil hydrolyase; ribosomal large subunit pseudouridine synthase B 300608..301351 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058512 NP_777884.1 CDS sohB NC_004545.1 301540 302589 D SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 301540..302589 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058411 NP_777885.1 CDS suhB NC_004545.1 303565 304365 R COG0483; IMPase; IMP; inositol monophosphatase; lithium-sensitive myo-inositol monophosphatase A1; myo-inositol-1(or 4)-monophosphatase complement(303565..304365) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058468 NP_777886.1 CDS yfgB NC_004545.1 304751 305872 D COG0820; hypothetical protein 304751..305872 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058599 NP_777887.1 CDS hisS NC_004545.1 307258 308535 D COG0124; histidine-tRNA ligase; HisRS; histidyl-tRNA synthetase 307258..308535 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058412 NP_777888.1 CDS glyA NC_004545.1 308661 309914 D COG0112; serine methylase; glycine hydroxymethyltransferase; SHMT; serine hydroxymethyltransferase 308661..309914 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058462 NP_777889.1 CDS bioD NC_004545.1 310034 310717 R COG0132; dethiobiotin synthase; DTB synthetase; DTBS; dethiobiotin synthetase complement(310034..310717) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058253 NP_777890.1 CDS bioC NC_004545.1 310714 311457 R COG0500; biotin synthesis protein BioC complement(310714..311457) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058513 NP_777891.1 CDS bioF NC_004545.1 311447 312601 R COG0156; AONS; 8-amino-7- ketopelargonate synthase; 7-keto-8-amino-pelargonic acid synthetase; 7-KAP synthetase; L-alanine--pimelyl CoA ligase; 8-amino-7-oxononanoate synthase complement(311447..312601) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058595 NP_777892.1 CDS bioB NC_004545.1 312598 313632 R COG0502; biotin synthetase; biotin synthase complement(312598..313632) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058249 NP_777893.1 CDS bioA NC_004545.1 313714 315003 D COG0161; 7,8-diamino-pelargonic acid aminotransferase; DAPA aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 313714..315003 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058602 NP_777894.1 CDS ybhE NC_004545.1 315011 316006 R catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase complement(315011..316006) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058415 NP_777895.1 CDS mfd NC_004545.1 316434 318527 R COG1197; TRCF; transcription-repair coupling factor complement(316434..318527) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058463 NP_777896.1 CDS gapA NC_004545.1 320110 321111 D COG0057; GAPDH; glyceraldehyde 3-phosphate dehydrogenase 320110..321111 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058260 NP_777897.1 CDS fldA NC_004545.1 321257 321781 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA complement(321257..321781) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058475 NP_777898.1 CDS phrB NC_004545.1 322294 323730 D COG0415; DNA photolyase; photoreactivating enzyme; deoxyribodipyrimidine photolyase 322294..323730 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058413 NP_777899.1 CDS ybgI NC_004545.1 323766 324509 D COG0327; hypothetical protein 323766..324509 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058514 NP_777900.1 CDS sucA NC_004545.1 324852 327602 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 324852..327602 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058600 NP_777901.1 CDS sucB NC_004545.1 327613 328845 D COG0508; dihydrolipoamide transsuccinylase; E2; E2O; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex 327613..328845 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058259 NP_777902.1 CDS pal NC_004545.1 328948 329469 R COG2885; surface antigen; PPL; peptidoglycan-associated lipoprotein precursor complement(328948..329469) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058262 NP_777903.1 CDS gpmA NC_004545.1 330198 330896 D COG0588; phosphoglyceromutase; PGAM; BPG-dependent PGAM; phosphoglycerate mutase 330198..330896 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058466 NP_777904.1 CDS pfkA NC_004545.1 331073 332035 D catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 331073..332035 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058596 NP_777905.1 CDS tpiA NC_004545.1 332959 333717 R COG0149; TIM; triosephosphate isomerase complement(332959..333717) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058472 NP_777906.2 CDS rpsA NC_004545.1 334005 335705 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(334005..335705) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058255 NP_777907.1 CDS cmk NC_004545.1 335816 336508 R COG0283; CK; cytidine monophosphate kinase; CMP kinase; (MssA protein; P25; cytidylate kinase complement(335816..336508) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058251 NP_777908.1 CDS aroA NC_004545.1 336665 337948 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(336665..337948) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058414 NP_777909.1 CDS serC NC_004545.1 338022 339143 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(338022..339143) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058665 NP_777910.1 CDS serS NC_004545.1 339256 340554 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(339256..340554) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058416 NP_777911.1 CDS trxB NC_004545.1 341206 342186 D COG0492; TRXR; thioredoxin reductase 341206..342186 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058461 NP_777912.1 CDS infA NC_004545.1 342241 342459 D COG0361; translation initiation factor IF-1 342241..342459 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058202 NP_777913.1 CDS aspS NC_004545.1 342535 344265 D COG0173; aspartate-tRNA ligase; AspRS; aspartyl-tRNA synthetase 342535..344265 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058257 NP_777914.1 CDS znuB NC_004545.1 344357 345142 R COG1108; high-affinity zinc uptake system membrane protein ZnuB complement(344357..345142) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058604 NP_777915.1 CDS znuC NC_004545.1 345178 345894 R COG1121; ATP-binding protein; high-affinity zinc uptake system ATP-binding protein ZnuC complement(345178..345894) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058417 NP_777916.1 CDS yebA NC_004545.1 346080 347210 D COG0739; metalloendopeptidase-like membrane protein 346080..347210 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058605 NP_777917.1 CDS pykA NC_004545.1 347279 348718 R COG0469; PK; pyruvate kinase complement(347279..348718) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058264 NP_777918.1 CDS zwf NC_004545.1 349167 350639 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 349167..350639 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058476 NP_777919.1 CDS htpX NC_004545.1 350972 351847 D metalloprotease; heat shock protein HtpX 350972..351847 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058603 NP_777920.1 CDS yoaE NC_004545.1 352488 354047 D COG1253; COG0861; hypothetical protein 352488..354047 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058265 NP_777921.1 CDS yeaZ NC_004545.1 354198 354863 D COG1214; protease precursor 354198..354863 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058263 NP_777922.1 CDS minE NC_004545.1 354884 355135 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(354884..355135) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058266 NP_777923.1 CDS minD NC_004545.1 355139 355951 R COG2894; septum site-determining protein MinD; septum site-determining protein complement(355139..355951) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058270 NP_777924.1 CDS minC NC_004545.1 355976 356680 R COG0850; septum site-determining protein MinC complement(355976..356680) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058473 NP_777925.1 CDS rsmC NC_004545.1 357059 358039 D COG2813; rRNA (guanine-N2-)-methyltransferase; 16S rRNA m2G1207 methyltransferase; ribosomal RNA small subunit methyltransferase C 357059..358039 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058474 NP_777926.1 CDS mviN NC_004545.1 358702 360243 R COG0728; virulence factor MviN complement(358702..360243) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058443 NP_777927.1 CDS flgB NC_004545.1 361919 362329 D COG1815; flagellar basal-body rod protein FlgB 361919..362329 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058478 NP_777928.1 CDS flgC NC_004545.1 362333 362743 D COG1558; proximal rod protein; flagellar basal body rod protein FlgC 362333..362743 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058256 NP_777929.2 CDS flgF NC_004545.1 363479 364225 D FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 363479..364225 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058135 NP_777930.1 CDS flgG NC_004545.1 364255 365037 D COG1749; distal rod protein; flagellar basal-body rod protein FlgG 364255..365037 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058267 NP_777931.1 CDS flgH NC_004545.1 365107 365841 D COG2063; basal body L-ring protein; flagellar L-ring protein precursor 365107..365841 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058610 NP_777932.1 CDS flgI NC_004545.1 365946 367073 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 365946..367073 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058272 NP_777933.1 CDS flgJ NC_004545.1 367077 367529 D COG1705; flagellar protein FlgJ-like protein 367077..367529 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058268 NP_777934.1 CDS rne NC_004545.1 368538 369770 R COG1530; ribonuclease G complement(368538..369770) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058418 NP_777935.1 CDS rluC NC_004545.1 370167 371114 D COG0564; pseudouridylate synthase; uracil hydrolyase; ribosomal large subunit pseudouridine synthase D 370167..371114 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058261 NP_777936.1 CDS rpmF NC_004545.1 371349 371513 D COG0333; 50S ribosomal protein L32 371349..371513 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058480 NP_777937.1 CDS fabD NC_004545.1 371796 372731 D COG0331; MCT; malonyl CoA-ACP transacylase 371796..372731 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058274 NP_777938.1 CDS fabG NC_004545.1 372741 373478 D COG1028; 3-ketoacyl- acyl carrier protein reductase; 3-oxoacyl-ACP reductase 372741..373478 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058479 NP_777939.1 CDS acpP NC_004545.1 373583 373819 D COG0236; ACP; acyl carrier protein 373583..373819 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058611 NP_777940.1 CDS tmk NC_004545.1 374000 374653 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 374000..374653 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058609 NP_777941.1 CDS holB NC_004545.1 374650 375660 D COG0470; DNA polymerase III delta' subunit 374650..375660 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058139 NP_777942.1 CDS ycfH NC_004545.1 375693 376490 D COG0084; deoxyribonuclease 375693..376490 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058419 NP_777943.1 CDS ptsG NC_004545.1 376638 378077 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunits IIBC 376638..378077 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058276 NP_777944.1 CDS ycfF NC_004545.1 378195 378533 D COG0537; HIT-like protein 378195..378533 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058608 NP_777945.1 CDS asnC NC_004545.1 379444 380844 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(379444..380844) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058271 NP_777946.1 CDS yceA NC_004545.1 381948 382886 R COG1054; hypothetical protein complement(381948..382886) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058459 NP_777947.1 CDS valS NC_004545.1 382967 385837 R COG0525; valine-tRNA ligase; VALRS; valyl-tRNA synthetase complement(382967..385837) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058279 NP_777948.1 CDS pepA NC_004545.1 385912 387417 R COG0260; leucine aminopeptidase; LAP; leucyl aminopeptidase; aminopeptidase A/I; cytosol aminopeptidase complement(385912..387417) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058145 NP_777949.1 CDS argF NC_004545.1 387894 388913 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I 387894..388913 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058424 NP_777950.1 CDS yhaR NC_004545.1 389813 390193 D COG0251; p14.5; UK114 antigen homolog; translational inhibitor protein 389813..390193 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058141 NP_777951.1 CDS deaD NC_004545.1 390346 392154 R COG0513; dead-box protein; ATP-dependent RNA helicase complement(390346..392154) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058142 NP_777952.1 CDS pnp NC_004545.1 392685 394766 R COG1185; polynucleotide phosphorylase; PNPase; CAP87K; polynucleotide phosphorylase complement(392685..394766) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058421 NP_777953.1 CDS rpsO NC_004545.1 395007 395276 R COG0184; BS18; 30S ribosomal protein S15 complement(395007..395276) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058137 NP_777954.1 CDS truB NC_004545.1 395408 396316 R COG0130; tRNA pseudouridine 55 synthase; Psi55 synthase; pseudouridylate synthase; uracil hydrolyase; P35 protein; tRNA pseudouridine synthase B complement(395408..396316) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058607 NP_777955.1 CDS rbfA NC_004545.1 396349 396723 R COG0858; P15B protein; ribosome-binding factor A complement(396349..396723) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058277 NP_777956.1 CDS infB NC_004545.1 396760 399390 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(396760..399390) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058140 NP_777957.1 CDS nusA NC_004545.1 399405 400898 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(399405..400898) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058269 NP_777958.1 CDS mrsA NC_004545.1 401764 403125 R COG1109; MrsA protein; phosphoglucosamine mutase complement(401764..403125) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058615 NP_777959.1 CDS hflB NC_004545.1 403520 405352 R COG0465; cell division protein complement(403520..405352) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058282 NP_777960.1 CDS ftsJ NC_004545.1 405411 406043 R COG0293; rRNA (uridine-2'-O-)-methyltransferase; 23S rRNA m2U2552 methyltransferase; cell division protein FtsJ; ribosomal RNA large subunit methyltransferase J complement(405411..406043) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058422 NP_777961.1 CDS greA NC_004545.1 406178 406657 R COG0782; transcript cleavage factor GreA; transcription elongation factor GreA complement(406178..406657) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058278 NP_777962.1 CDS yrbA NC_004545.1 407141 407380 D COG0271; hypothetical protein 407141..407380 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058420 NP_777963.1 CDS murA NC_004545.1 407401 408651 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 407401..408651 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058380 NP_777964.1 CDS rplU NC_004545.1 408888 409226 D COG0261; 50S ribosomal protein L21 408888..409226 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058613 NP_777965.1 CDS rpmA NC_004545.1 409216 409473 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 409216..409473 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058144 NP_777966.1 CDS obgE NC_004545.1 409712 410728 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 409712..410728 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058281 NP_777967.1 CDS rpsI NC_004545.1 410946 411338 R COG0103; BS10; 30S ribosomal protein S9 complement(410946..411338) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058481 NP_777968.1 CDS rplM NC_004545.1 411351 411785 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(411351..411785) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058612 NP_777969.1 CDS pheA NC_004545.1 412135 413250 D chorismate mutase; CM; prephenate dehydratase; PDT; COG1605; COG0077; P-protein 412135..413250 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058143 NP_777970.1 CDS ffh NC_004545.1 413493 414845 D COG0541; fifty-four homolog; P48; signal recognition particle protein 413493..414845 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058429 NP_777971.1 CDS rpsP NC_004545.1 414937 415200 D COG0228; BS17; 30S ribosomal protein S16 414937..415200 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058426 NP_777972.1 CDS rimM NC_004545.1 415221 415763 D COG0806; 21K; 16S rRNA-processing protein RimM 415221..415763 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058621 NP_777973.1 CDS trmD NC_004545.1 415789 416541 D COG0336; M1G-methyltransferase; tRNA [GM37] methyltransferase; tRNA (guanine-N1)-methyltransferase 415789..416541 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058283 NP_777974.1 CDS rplS NC_004545.1 416573 416929 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 416573..416929 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058275 NP_777975.1 CDS tldD NC_004545.1 417073 418524 R COG0312; TldD protein complement(417073..418524) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058385 NP_777976.1 CDS aroQ NC_004545.1 418870 419334 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 418870..419334 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058286 NP_777977.1 CDS rluD NC_004545.1 419471 420424 R COG0564; pseudouridylate synthase; uracil hydrolyase; ribosomal large subunit pseudouridine synthase D complement(419471..420424) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058486 NP_777978.1 CDS alaS NC_004545.1 420763 423405 D COG0013; alanine-tRNA ligase; AlaRS; alanyl-tRNA synthetase 420763..423405 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058285 NP_777979.1 CDS csrA NC_004545.1 423584 423766 D COG1551; repressor RSMA; carbon storage regulator-like protein 423584..423766 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058482 NP_777980.1 CDS gshA NC_004545.1 424268 425833 D involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 424268..425833 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058287 NP_777981.1 CDS endA NC_004545.1 426182 426919 D COG2356; endo I; endonuclease I 426182..426919 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058432 NP_777982.1 CDS ygfA NC_004545.1 427210 427797 R COG0212; 5-formyltetrahydrofolate cyclo-ligase complement(427210..427797) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058425 NP_777983.1 CDS rpiA NC_004545.1 428173 428829 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(428173..428829) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058288 NP_777984.1 CDS glnS NC_004545.1 429617 431269 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 429617..431269 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058382 NP_777985.1 CDS pyrG NC_004545.1 431582 433216 D CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 431582..433216 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058378 NP_777986.1 CDS eno NC_004545.1 433283 434578 D COG0148; 2-phosphoglycerate dehydratase; 2-phospho-D- glycerate hydro-lyase; enolase 433283..434578 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058617 NP_777987.1 CDS mutS NC_004545.1 437485 439887 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(437485..439887) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058312 NP_777988.1 CDS dsbA NC_004545.1 440143 440778 D COG0526; thiol:disulfide interchange protein DsbA 440143..440778 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058487 NP_777989.1 CDS polA NC_004545.1 440900 441808 D COG0258; 5'-3' exonuclease 440900..441808 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058290 NP_777990.1 CDS engB NC_004545.1 442124 442834 R COG0218; GTP-binding protein EngB complement(442124..442834) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058619 NP_777991.1 CDS typA NC_004545.1 442992 444842 D COG1217; tyrosine phosphorylated protein A; GTP-binding protein TypA 442992..444842 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058485 NP_777992.1 CDS gmk NC_004545.1 444887 445510 R COG0194; GMP kinase; guanylate kinase complement(444887..445510) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058136 NP_777993.1 CDS thyA NC_004545.1 445638 446432 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(445638..446432) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058430 NP_777994.1 CDS lgt NC_004545.1 446453 447304 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(446453..447304) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058622 NP_777995.1 CDS lysA NC_004545.1 447462 448718 R catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase complement(447462..448718) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058625 NP_777996.1 CDS lysS NC_004545.1 448844 450346 R COG1190; lysine-tRNA ligase; LYSRS; lysyl-tRNA synthetase complement(448844..450346) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058623 NP_777997.1 CDS prfB NC_004545.1 450407 451420 R COG1186; RF-2; peptide chain release factor 2 complement(450407..451420) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058428 NP_777998.1 CDS ygfZ NC_004545.1 451745 452701 D COG0354; hypothetical protein 451745..452701 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058431 NP_777999.1 CDS yleA NC_004545.1 452828 454165 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 452828..454165 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058618 NP_778000.1 CDS ybeY NC_004545.1 454364 454828 D COG0319; hypothetical protein 454364..454828 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058484 NP_778001.1 CDS corC NC_004545.1 454913 455761 D COG1253; TLYC; magnesium and cobalt efflux protein CorC 454913..455761 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058291 NP_778002.1 CDS leuS NC_004545.1 456713 459298 D COG0495; leucine-tRNA ligase; LEURS; leucyl-tRNA synthetase 456713..459298 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058295 NP_778003.1 CDS holA NC_004545.1 459348 460346 D COG1466; DNA polymerase III delta subunit 459348..460346 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058489 NP_778004.1 CDS sirA NC_004545.1 460933 461172 D COG0425; SirA protein 460933..461172 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058379 NP_778005.1 CDS asd NC_004545.1 461390 462499 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(461390..462499) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058293 NP_778006.1 CDS yhgN NC_004545.1 463056 463655 D YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); dITP- and XTP- hydrolase 463056..463655 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058433 NP_778007.1 CDS pgk NC_004545.1 463907 465088 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 463907..465088 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058371 NP_778008.1 CDS fba NC_004545.1 465127 466206 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 465127..466206 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058292 NP_778009.1 CDS yggB NC_004545.1 466366 467211 D COG0668; hypothetical protein 466366..467211 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058436 NP_778010.1 CDS recC NC_004545.1 467229 470564 D COG1330; exodeoxyribonuclease V polypeptide; exodeoxyribonuclease V subunit gamma 467229..470564 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058505 NP_778011.1 CDS recB NC_004545.1 470604 474146 D COG1074; exodeoxyribonuclease V polypeptide; exodeoxyribonuclease V subunit beta 470604..474146 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058367 NP_778012.1 CDS recD NC_004545.1 474168 476024 D COG0507; exodeoxyribonuclease V subunit alpha 474168..476024 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058296 NP_778013.1 CDS ribH NC_004545.1 476422 476901 D COG0054; DMRL synthase; lumazine synthase; riboflavin synthase beta chain; 6,7-dimethyl-8-ribityllumazine synthase 476422..476901 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058626 NP_778014.1 CDS ribD NC_004545.1 476991 478109 D COG0117; COG1985; riboflavin biosynthesis protein RibD; riboflavin-specific deaminase; HTP reductase; diaminohydroxyphosphoribosylaminopyrimidine deaminase 476991..478109 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058488 NP_778015.1 CDS nusB NC_004545.1 478273 478707 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 478273..478707 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058628 NP_778016.1 CDS yajR NC_004545.1 481565 482749 R COG0477; transport protein complement(481565..482749) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058624 NP_778017.1 CDS yccK NC_004545.1 482901 483185 D COG2920; sulfite reductase subunit protein 482901..483185 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058304 NP_778018.1 CDS cyoE NC_004545.1 483241 484107 R COG0109; heme O synthase; protoheme IX farnesyltransferase complement(483241..484107) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058377 NP_778019.1 CDS cyoD NC_004545.1 484095 484397 R COG3125; cytochrome O ubiquinol oxidase protein CyoD complement(484095..484397) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058297 NP_778020.1 CDS cyoC NC_004545.1 484423 485007 R COG1845; ubiquinol oxidase chain C; cytochrome O ubiquinol oxidase subunit III complement(484423..485007) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058631 NP_778021.1 CDS cyoB NC_004545.1 485048 487027 R COG0843; cytochrome O subunit 1; oxidase BO(3) subunit 1; cytochrome O ubiquinol oxidase subunit 1; ubiquinol oxidase chain A; ubiquinol oxidase polypeptide I complement(485048..487027) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058363 NP_778022.1 CDS cyoA NC_004545.1 487099 487977 R COG1622; cytochrome O subunit 2; oxidase BO(3) subunit 2; cytochrome O ubiquinol oxidase subunit 2; ubiquinol oxidase chain B; ubiquinol oxidase polypeptide II precursor complement(487099..487977) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058438 NP_778023.1 CDS bolA NC_004545.1 488308 488625 D COG0271; BolA 488308..488625 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058439 NP_778024.1 CDS clpP NC_004545.1 489272 489889 D COG0740; endopeptidase Clp; caseinolytic protease; protease Ti; heat shock protein F21.5; ATP-dependent Clp protease proteolytic subunit 489272..489889 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058632 NP_778025.1 CDS clpX NC_004545.1 489973 491259 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 489973..491259 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058357 NP_778026.1 CDS lon NC_004545.1 491446 493788 D COG0466; ATP-dependent protease La 491446..493788 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058354 NP_778027.1 CDS ppiD NC_004545.1 493897 495432 D COG0760; PPIase D; rotamase D; peptidyl-prolyl cis-trans isomerase D 493897..495432 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058491 NP_778028.1 CDS mdlA NC_004545.1 495885 497624 D COG1132; ATP-binding protein; ABC transporter 495885..497624 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058305 NP_778029.1 CDS mdlB NC_004545.1 497653 499389 D COG1132; ATP-binding protein; ATP transporter 497653..499389 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058630 NP_778030.1 CDS dnaX NC_004545.1 499709 500821 D COG2812; DNA polymerase III subunit gamma 499709..500821 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058627 NP_778031.1 CDS ybaB NC_004545.1 501046 501378 D COG0718; hypothetical protein 501046..501378 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058350 NP_778032.1 CDS htpG NC_004545.1 501507 503387 D molecular chaperone; heat shock protein 90 501507..503387 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058298 NP_778033.1 CDS adk NC_004545.1 503441 504088 D COG0563; ATP-AMP transphosphorylase; adenylate kinase 503441..504088 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058490 NP_778034.1 CDS folD NC_004545.1 504309 505172 D COG0190; FolD bifunctional protein; methylenetetrahydrofolate dehydrogenase 504309..505172 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058346 NP_778035.1 CDS cysS NC_004545.1 505190 506599 R COG0215; cysteine-tRNA ligase; CysRS; cysteinyl-tRNA synthetase complement(505190..506599) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058301 NP_778036.1 CDS ybeD NC_004545.1 507002 507268 D COG2921; hypothetical protein 507002..507268 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058299 NP_778037.1 CDS cspE NC_004545.1 507389 507598 R member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE complement(507389..507598) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058348 NP_778038.1 CDS aroE NC_004545.1 511465 512313 R COG0169; shikimate 5-dehydrogenase complement(511465..512313) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058638 NP_778039.1 CDS yrdC NC_004545.1 512306 512866 R COG0009; hypothetical protein complement(512306..512866) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058492 NP_778040.1 CDS def NC_004545.1 513039 513521 D COG0242; PDF; formylmethionine deformylase; polypeptide deformylase 513039..513521 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058352 NP_778041.1 CDS fmt NC_004545.1 513523 514494 D COG0223; methionyl-tRNA formyltransferase 513523..514494 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058634 NP_778042.1 CDS rplQ NC_004545.1 515758 516147 R COG0203; 50S ribosomal protein L17 complement(515758..516147) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058442 NP_778043.1 CDS rpoA NC_004545.1 516199 517194 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(516199..517194) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058302 NP_778044.1 CDS rpsD NC_004545.1 517223 517843 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(517223..517843) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058509 NP_778045.1 CDS rpsK NC_004545.1 517892 518281 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(517892..518281) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058493 NP_778046.1 CDS rpsM NC_004545.1 518300 518656 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(518300..518656) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058635 NP_778047.1 CDS rpmJ NC_004545.1 518799 518915 R COG0257; ribosomal protein II; ribosomal protein B; BL38; 50S ribosomal protein L36 complement(518799..518915) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058637 NP_778048.1 CDS secY NC_004545.1 518944 520269 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(518944..520269) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058445 NP_778049.1 CDS rplO NC_004545.1 520282 520725 R COG0200; 50S ribosomal protein L15 complement(520282..520725) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058345 NP_778050.1 CDS rpmD NC_004545.1 520736 520912 R COG1841; 50S ribosomal protein L30 complement(520736..520912) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058444 NP_778051.1 CDS rpsE NC_004545.1 520909 521466 R COG0098; BS5; 30S ribosomal protein S5 complement(520909..521466) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058303 NP_778052.1 CDS rplR NC_004545.1 521435 521800 R COG0256; 50S ribosomal protein L18 complement(521435..521800) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058440 NP_778053.1 CDS rplF NC_004545.1 521802 522341 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(521802..522341) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058300 NP_778054.1 CDS rpsH NC_004545.1 522356 522748 R COG0096; BS8; 30S ribosomal protein S8 complement(522356..522748) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058639 NP_778055.1 CDS rpsN NC_004545.1 522785 523090 R COG0199; 30S ribosomal protein S14 complement(522785..523090) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058340 NP_778056.1 CDS rplE NC_004545.1 523115 523654 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(523115..523654) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058566 NP_778057.1 CDS rplX NC_004545.1 523670 523984 R COG0198; ribosomal protein L24 complement(523670..523984) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058494 NP_778058.1 CDS rplN NC_004545.1 523997 524365 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(523997..524365) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058344 NP_778059.1 CDS rpsQ NC_004545.1 524521 524778 R COG0186; 30S ribosomal protein S17 complement(524521..524778) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058496 NP_778060.1 CDS rpmC NC_004545.1 524771 524968 R COG0255; 50S ribosomal protein L29 complement(524771..524968) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058518 NP_778061.1 CDS rplP NC_004545.1 524968 525378 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(524968..525378) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058307 NP_778062.1 CDS rpsC NC_004545.1 525391 526098 R COG0092; BS3; BS2; 30S ribosomal protein S3 complement(525391..526098) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058306 NP_778063.1 CDS rplV NC_004545.1 526104 526463 R COG0091; 50S ribosomal protein L22 complement(526104..526463) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058640 NP_778064.1 CDS rpsS NC_004545.1 526490 526768 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(526490..526768) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058330 NP_778065.1 CDS rplB NC_004545.1 526788 527609 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(526788..527609) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058310 NP_778066.1 CDS rplW NC_004545.1 527650 527952 R COG0089; 50S ribosomal protein L23 complement(527650..527952) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058644 NP_778067.1 CDS rplD NC_004545.1 527964 528572 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(527964..528572) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058495 NP_778068.1 CDS rplC NC_004545.1 528574 529218 R COG0087; 50S ribosomal protein L3 complement(528574..529218) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058641 NP_778069.1 CDS rpsJ NC_004545.1 529254 529568 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(529254..529568) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058308 NP_778070.1 CDS tuf NC_004545.1 530062 531246 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(530062..531246) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058448 NP_778071.1 CDS fusA NC_004545.1 531310 533442 R COG0480; EF-G; elongation factor G complement(531310..533442) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058313 NP_778072.1 CDS rpsG NC_004545.1 533541 534011 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(533541..534011) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058343 NP_778073.1 CDS rpsL NC_004545.1 534079 534450 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(534079..534450) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058645 NP_778074.1 CDS yheL NC_004545.1 534525 534812 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB complement(534525..534812) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058497 NP_778075.1 CDS yheM NC_004545.1 534829 535188 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC complement(534829..535188) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058318 NP_778076.1 CDS yheN NC_004545.1 535204 535596 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD complement(535204..535596) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058315 NP_778077.1 CDS fkpA NC_004545.1 535676 536431 R COG0545; PPiase; rotamase; FKBP-type peptidylprolyl isomerase complement(535676..536431) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058437 NP_778078.1 CDS yhfC NC_004545.1 537013 538179 D COG0477; hypothetical protein 537013..538179 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058314 NP_778079.1 CDS trpS NC_004545.1 538176 539177 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(538176..539177) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058311 NP_778080.1 CDS rpe NC_004545.1 539308 539994 R COG0036; pentose-5-phosphate 3-epimerase; PPE; R5P3E; ribulose-phosphate 3-epimerase complement(539308..539994) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058498 NP_778081.1 CDS aroB NC_004545.1 540099 541166 R COG0337; 3-dehydroquinate synthase complement(540099..541166) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058319 NP_778082.1 CDS aroK NC_004545.1 541217 541741 R COG0703; SK; shikimate kinase complement(541217..541741) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058337 NP_778083.1 CDS deoD NC_004545.1 542724 543440 R COG0813; inosine phosphorylase; PNP; purine nucleoside phosphorylase complement(542724..543440) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058309 NP_778084.1 CDS deoB NC_004545.1 543477 544703 R catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase complement(543477..544703) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058642 NP_778085.1 CDS prfC NC_004545.1 544861 546459 R COG0480; RF-3; peptide chain release factor 3 complement(544861..546459) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058317 NP_778086.1 CDS yhgI NC_004545.1 547566 548141 R COG0316; COG0694; hypothetical protein complement(547566..548141) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058499 NP_778087.1 CDS bioH NC_004545.1 548270 549067 D COG0596; biotin biosynthesis protein 548270..549067 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058338 NP_778088.1 CDS ssb NC_004545.1 549120 549620 R COG0629; SSB; helix-destabilizing protein; single-strand binding protein complement(549120..549620) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058648 NP_778089.1 CDS dnaB NC_004545.1 550628 552019 D COG0305; replicative DNA helicase 550628..552019 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058321 NP_778090.1 CDS gshB NC_004545.1 552392 553366 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 552392..553366 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058441 NP_778091.1 CDS yqgE NC_004545.1 553464 554033 D COG1678; hypothetical protein 553464..554033 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058643 NP_778092.1 CDS yqgF NC_004545.1 554045 554458 D COG0816; hypothetical protein 554045..554458 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058336 NP_778093.1 CDS leuA NC_004545.1 554780 555952 R COG0119; 2-isopropylmalate synthase complement(554780..555952) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058325 NP_778094.1 CDS leuD NC_004545.1 556187 556792 R COG0066; isopropylmalate isomerase; alpha-IPM isomerase; IPMI; 3-isopropylmalate dehydratase small subunit complement(556187..556792) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058449 NP_778095.1 CDS leuC NC_004545.1 556816 558231 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(556816..558231) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058646 NP_778096.1 CDS leuB NC_004545.1 558228 559328 R COG0473; beta-IPM dehydrogenase; IMDH; 3-IPM-DH; 3-isopropylmalate dehydrogenase complement(558228..559328) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058649 NP_778097.1 CDS yggS NC_004545.1 559777 560448 D COG0325; hypothetical protein 559777..560448 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058316 NP_778098.1 CDS yggW NC_004545.1 560559 561683 D COG0635; oxidase 560559..561683 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058339 NP_778099.1 CDS yggH NC_004545.1 561774 562502 R COG0220; methyltransferase complement(561774..562502) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058500 NP_778100.1 CDS mutY NC_004545.1 562662 563717 D COG1194; A/G-specific adenine glycosylase 562662..563717 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058656 NP_778101.1 CDS yggX NC_004545.1 563710 563973 D COG2924; hypothetical protein 563710..563973 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058451 NP_778102.1 CDS murI NC_004545.1 564044 564835 D COG0796; glutamate racemase 564044..564835 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058653 NP_778103.1 CDS sbcB NC_004545.1 564892 566337 R Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I complement(564892..566337) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058323 NP_778104.1 CDS pyrE NC_004545.1 566908 567528 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 566908..567528 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058502 NP_778105.1 CDS dut NC_004545.1 567550 568008 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(567550..568008) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058326 NP_778106.1 CDS rplI NC_004545.1 568911 569375 R COG0359; 50S ribosomal protein L9 complement(568911..569375) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058651 NP_778107.1 CDS rpsR NC_004545.1 569416 569643 R COG0238; 30S ribosomal protein S18 complement(569416..569643) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058201 NP_778108.1 CDS rpsF NC_004545.1 569763 570122 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(569763..570122) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058453 NP_778109.1 CDS purA NC_004545.1 570758 572047 R COG0104; IMP-aspartate ligase; ADSS; AMPSASE; adenylosuccinate synthetase complement(570758..572047) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058452 NP_778110.1 CDS hflC NC_004545.1 572122 573102 R COG0330; hypothetical protein complement(572122..573102) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058324 NP_778111.1 CDS hflK NC_004545.1 573106 574359 R COG0330; HflK complement(573106..574359) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058657 NP_778112.1 CDS miaA NC_004545.1 574629 575600 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(574629..575600) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058320 NP_778113.1 CDS mutL NC_004545.1 575584 577377 R COG0323; DNA mismatch repair protein MutL complement(575584..577377) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058654 NP_778114.1 CDS mtlD NC_004545.1 577481 578653 R COG0246; mannitol-1-phosphate 5-dehydrogenase complement(577481..578653) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058182 NP_778115.1 CDS mtlA NC_004545.1 578766 580688 R COG2213; COG1762; EIIABC-Mtl; mannitol- permease IIABC component; phosphotransferase enzyme II ABC component; EII-Mtl; PTS system mannitol-specific IIABC component complement(578766..580688) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058455 NP_778116.1 CDS pgi NC_004545.1 581205 582863 R COG0166; GPI; phosphoglucose isomerase; PGI; phosphohexose isomerase; PHI; glucose-6-phosphate isomerase complement(581205..582863) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058454 NP_778117.1 CDS orn NC_004545.1 583534 584016 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 583534..584016 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058652 NP_778118.1 CDS amiB NC_004545.1 584674 585327 D COG0860; N-acetylmuramoyl-L-alanine amidase 584674..585327 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058322 NP_778119.1 CDS rpmE NC_004545.1 585580 585789 R COG0254; 50S ribosomal protein L31 complement(585580..585789) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058327 NP_778120.1 CDS hslV NC_004545.1 586694 587224 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 586694..587224 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058329 NP_778121.1 CDS hslU NC_004545.1 587237 588571 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 587237..588571 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058658 NP_778122.1 CDS trpG NC_004545.1 589033 589611 R COG0512; glutamine amido- transferase; anthranilate synthase component II complement(589033..589611) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058501 NP_778123.1 CDS trpE NC_004545.1 589611 591179 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(589611..591179) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058655 NP_778124.1 CDS fpr NC_004545.1 591689 592438 D COG1018; FNR; flavodoxin reductase; FLXR; FLDR; ferredoxin-NADP reductase 591689..592438 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058457 NP_778125.1 CDS yjeA NC_004545.1 592490 593458 R lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase complement(592490..593458) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058175 NP_778126.1 CDS yba3 NC_004545.1 594006 595202 R hypothetical protein complement(594006..595202) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058450 NP_778127.1 CDS uspA NC_004545.1 595703 596131 R COG0589; universal stress protein complement(595703..596131) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058456 NP_778128.1 CDS pitA NC_004545.1 596304 597803 R COG0306; phosphate transporter complement(596304..597803) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058180 NP_778129.1 CDS ynfM NC_004545.1 598039 599250 R COG0477; transport protein complement(598039..599250) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058118 NP_778130.1 CDS dapF NC_004545.1 599411 600271 R COG0253; DAP epimerase; diaminopimelate epimerase complement(599411..600271) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058328 NP_778131.1 CDS cyaY NC_004545.1 600492 600848 D COG1965; CyaY 600492..600848 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058124 NP_778132.1 CDS rho NC_004545.1 601520 602779 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(601520..602779) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058663 NP_778133.1 CDS trxA NC_004545.1 603044 603373 R COG0526; TRX; thioredoxin complement(603044..603373) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058508 NP_778134.1 CDS rep NC_004545.1 603522 605534 R COG0210; ATP-dependent DNA helicase Rep complement(603522..605534) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058662 NP_778135.1 CDS ilvC NC_004545.1 605635 607110 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(605635..607110) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058333 NP_778136.1 CDS ilvD NC_004545.1 607185 609023 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(607185..609023) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058331 NP_778137.1 CDS nifS NC_004545.1 609579 610793 D COG1104; NifS-like protein; cysteine desulfurase 609579..610793 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058661 NP_778138.1 CDS iscU NC_004545.1 610825 611205 D COG0822; scaffold protein 610825..611205 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058660 NP_778139.1 CDS hscB NC_004545.1 611399 611908 D COG1076; chaperone protein HscB 611399..611908 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058123 NP_778140.1 CDS hscA NC_004545.1 611933 613468 D COG0443; heat shock protein 70; heat shock protein; HSP70; chaperone protein HscA 611933..613468 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058664 NP_778141.1 CDS fdx NC_004545.1 613586 613909 D COG0633; ferredoxin 613586..613909 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058334 NP_778142.1 CDS engA NC_004545.1 613976 615364 R COG1160; GTP-binding protein complement(613976..615364) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058174 NP_778143.1 CDS yfgM NC_004545.1 615399 615980 R hypothetical protein complement(615399..615980) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058179 NP_778246.1 CDS yqhA NC_004555.1 1 498 D hypothetical protein 1..498 Buchnera aphidicola str. Bp (Baizongia pistaciae) 2648312 NP_778247.1 CDS repA2 NC_004555.1 564 1283 D RepA2 protein 564..1283 Buchnera aphidicola str. Bp (Baizongia pistaciae) 2648313 NP_778248.1 CDS repA1 NC_004555.1 1373 2230 D RepA1 protein 1373..2230 Buchnera aphidicola str. Bp (Baizongia pistaciae) 2648311 bbp019 tRNA bbp019 NC_004545.1 19523 19595 R tRNA-Phe complement(19523..19595) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058368 bbp042 tRNA bbp042 NC_004545.1 50643 50716 R tRNA-Thr complement(50643..50716) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058387 bbp043 tRNA bbp043 NC_004545.1 50729 50803 R tRNA-Gly complement(50729..50803) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058534 bbp044 tRNA bbp044 NC_004545.1 50842 50923 R tRNA-Tyr complement(50842..50923) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058185 bbp045 tRNA bbp045 NC_004545.1 50949 51021 R tRNA-Thr complement(50949..51021) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058364 bbp063 tRNA bbp063 NC_004545.1 73205 73277 R tRNA-Lys complement(73205..73277) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058384 bbp064 tRNA bbp064 NC_004545.1 73288 73360 R tRNA-Val complement(73288..73360) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058543 bbp066 tRNA bbp066 NC_004545.1 74987 75059 D tRNA-Ala 74987..75059 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058392 bbp105 tRNA bbp105 NC_004545.1 116690 116766 R tRNA-Val complement(116690..116766) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058551 bbp226 tRNA bbp226 NC_004545.1 268543 268617 D tRNA-Ile 268543..268617 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058406 bbp227 tRNA bbp227 NC_004545.1 268665 268737 D tRNA-Ala 268665..268737 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058240 bbp231 tRNA bbp231 NC_004545.1 270888 270961 D tRNA-Asp 270888..270961 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058590 bbp306 tRNA bbp306 NC_004545.1 358164 358247 R tRNA-Leu complement(358164..358247) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058126 bbp307 tRNA bbp307 NC_004545.1 358279 358349 R bbp307 complement(358279..358349) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058601 bbp308 tRNA bbp308 NC_004545.1 358559 358643 D tRNA-Ser 358559..358643 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058606 bbp342 tRNA bbp342 NC_004545.1 401141 401226 R tRNA-Leu complement(401141..401226) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058614 bbp366 tRNA bbp366 NC_004545.1 423943 424031 D tRNA-Ser 423943..424031 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058284 bbp367 tRNA bbp367 NC_004545.1 424056 424129 D tRNA-Arg 424056..424129 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058616 bbp372 tRNA bbp372 NC_004545.1 429081 429151 R tRNA-Gln complement(429081..429151) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058620 bbp373 tRNA bbp373 NC_004545.1 429200 429287 R tRNA-Leu complement(429200..429287) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058280 bbp374 tRNA bbp374 NC_004545.1 429325 429398 R tRNA-Met complement(429325..429398) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058519 bbp406 tRNA bbp406 NC_004545.1 476063 476139 R tRNA-Met complement(476063..476139) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058629 bbp429 tRNA bbp429 NC_004545.1 504134 504207 R tRNA-Arg complement(504134..504207) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058358 bbp436 tRNA bbp436 NC_004545.1 511188 511260 R tRNA-Glu complement(511188..511260) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058633 bbp482 tRNA bbp482 NC_004545.1 542496 542585 D tRNA-Ser 542496..542585 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058446 bbp504 tRNA bbp504 NC_004545.1 566448 566520 R tRNA-Asn complement(566448..566520) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058335 bbp505 tRNA bbp505 NC_004545.1 566714 566789 D tRNA-Met 566714..566789 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058647 bbp520 tRNA bbp520 NC_004545.1 584164 584236 D tRNA-Gly 584164..584236 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058650 bbp535 tRNA bbp535 NC_004545.1 600940 601013 R tRNA-Pro complement(600940..601013) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058332 bbp536 tRNA bbp536 NC_004545.1 601049 601123 R tRNA-His complement(601049..601123) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058659 bbp537 tRNA bbp537 NC_004545.1 601164 601237 R tRNA-Arg complement(601164..601237) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058181 bbp543 tRNA bbp543 NC_004545.1 609304 609376 R tRNA-Trp complement(609304..609376) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058117 bbp225 rRNA bbp225 NC_004545.1 266932 268450 D 16S ribosomal RNA 266932..268450 Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058243 bbp434 rRNA bbp434 NC_004545.1 507888 508002 R 5S ribosomal RNA complement(507888..508002) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058434 bbp435 rRNA bbp435 NC_004545.1 508105 511028 R 23S ribosomal RNA complement(508105..511028) Buchnera aphidicola str. Bp (Baizongia pistaciae) 1058636