-- dump date 20140619_011943 -- class Genbank::CDS -- table cds_note -- id note YP_005617558.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005617559.1 COG0356 F0F1-type ATP synthase, subunit a YP_005617560.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005617561.1 COG0711 F0F1-type ATP synthase, subunit b YP_005617562.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005617563.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005617564.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005617565.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005617566.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005617567.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005617568.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005617569.1 COG0593 ATPase involved in DNA replication initiation YP_005617570.1 COG0230 Ribosomal protein L34 YP_005617572.1 COG0594 RNase P protein component YP_005617573.1 COG0706 Preprotein translocase subunit YidC YP_005617574.1 COG0486 Predicted GTPase YP_005617575.1 COG0234 Co-chaperonin GroES (HSP10) YP_005617576.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005617577.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005617578.1 COG1484 DNA replication protein YP_005617580.1 COG0742 N6-adenine-specific methylase YP_005617581.1 COG0552 Signal recognition particle GTPase YP_005617582.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005617583.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005617584.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005617585.1 COG0620 Methionine synthase II (cobalamin-independent) YP_005617586.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_005617587.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005617589.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005617590.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005617591.1 COG0222 Ribosomal protein L7/L12 YP_005617592.1 COG0244 Ribosomal protein L10 YP_005617593.1 COG0081 Ribosomal protein L1 YP_005617594.1 COG0080 Ribosomal protein L11 YP_005617595.1 COG0250 Transcription antiterminator YP_005617596.1 COG0690 Preprotein translocase subunit SecE YP_005617597.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005617598.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_005617599.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005617600.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_005617601.1 COG0548 Acetylglutamate kinase YP_005617602.1 COG0137 Argininosuccinate synthase YP_005617603.1 COG0165 Argininosuccinate lyase YP_005617604.1 COG0607 Rhodanese-related sulfurtransferase YP_005617605.1 COG1952 Preprotein translocase subunit SecB YP_005617606.1 COG1045 Serine acetyltransferase YP_005617607.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005617608.1 COG0358 DNA primase (bacterial type) YP_005617609.1 COG0828 Ribosomal protein S21 YP_005617610.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005617611.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005617612.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_005617613.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005617614.1 COG1968 Uncharacterized bacitracin resistance protein YP_005617615.1 COG2190 Phosphotransferase system IIA components YP_005617616.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_005617617.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005617618.1 COG0031 Cysteine synthase YP_005617619.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005617620.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005617622.1 COG1677 Flagellar hook-basal body protein YP_005617623.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_005617624.1 COG1536 Flagellar motor switch protein YP_005617625.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005617626.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005617629.1 COG3144 Flagellar hook-length control protein YP_005617630.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_005617631.1 COG3190 Flagellar biogenesis protein YP_005617632.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005617633.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005617634.1 COG0267 Ribosomal protein L33 YP_005617635.1 COG0227 Ribosomal protein L28 YP_005617637.1 COG2911 Uncharacterized protein conserved in bacteria YP_005617638.1 COG0221 Inorganic pyrophosphatase YP_005617639.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_005617641.1 COG0313 Predicted methyltransferases YP_005617642.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005617643.1 COG0176 Transaldolase YP_005617644.1 COG0021 Transketolase YP_005617645.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005617647.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005617648.1 COG0082 Chorismate synthase YP_005617650.1 COG2840 Uncharacterized protein conserved in bacteria YP_005617651.1 COG0040 ATP phosphoribosyltransferase YP_005617652.1 COG0141 Histidinol dehydrogenase YP_005617653.1 COG0241 Histidinol phosphatase and related phosphatases YP_005617654.1 COG0118 Glutamine amidotransferase YP_005617655.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_005617656.1 COG0107 Imidazoleglycerol-phosphate synthase YP_005617657.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_005617658.1 COG0362 6-phosphogluconate dehydrogenase YP_005617659.1 COG0717 Deoxycytidine deaminase YP_005617660.1 COG0143 Methionyl-tRNA synthetase YP_005617661.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005617662.1 COG0307 Riboflavin synthase alpha chain YP_005617663.1 COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA YP_005617664.1 COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB YP_005617666.1 COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC YP_005617667.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD YP_005617669.1 COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG YP_005617670.1 COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE YP_005617671.1 COG0177 Predicted EndoIII-related endonuclease YP_005617672.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005617673.1 COG0162 Tyrosyl-tRNA synthetase YP_005617674.1 COG0316 Uncharacterized conserved protein YP_005617675.1 COG0628 Predicted permease YP_005617676.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005617677.1 COG0441 Threonyl-tRNA synthetase YP_005617678.1 COG0290 Translation initiation factor 3 (IF-3) YP_005617679.1 COG0291 Ribosomal protein L35 YP_005617680.1 COG0292 Ribosomal protein L20 YP_005617681.1 COG0073 EMAP domain YP_005617682.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005617684.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005617685.1 COG1862 Preprotein translocase subunit YajC YP_005617686.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005617687.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005617688.1 COG0648 Endonuclease IV YP_005617689.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005617690.1 COG0586 Uncharacterized membrane-associated protein YP_005617691.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005617692.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005617693.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_005617694.1 COG0262 Dihydrofolate reductase YP_005617695.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005617696.1 COG0505 Carbamoylphosphate synthase small subunit YP_005617697.1 COG0289 Dihydrodipicolinate reductase YP_005617698.1 COG0761 Penicillin tolerance protein YP_005617699.1 COG0597 Lipoprotein signal peptidase YP_005617700.1 COG0060 Isoleucyl-tRNA synthetase YP_005617701.1 COG0196 FAD synthase YP_005617702.1 COG0268 Ribosomal protein S20 YP_005617703.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005617704.1 COG0443 Molecular chaperone YP_005617705.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005617706.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005617707.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005617708.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_005617709.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_005617710.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005617711.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005617712.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005617713.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005617714.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005617715.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005617716.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005617717.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005617718.1 COG0285 Folylpolyglutamate synthase YP_005617721.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005617722.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005617723.1 COG0216 Protein chain release factor A YP_005617724.1 COG2890 Methylase of polypeptide chain release factors YP_005617725.1 COG2912 Uncharacterized conserved protein YP_005617726.1 COG0171 NAD synthase YP_005617727.1 COG0282 Acetate kinase YP_005617728.1 COG0633 Ferredoxin YP_005617729.1 COG0208 Ribonucleotide reductase, beta subunit YP_005617730.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005617731.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005617732.1 COG0450 Peroxiredoxin YP_005617733.1 COG0692 Uracil DNA glycosylase YP_005617734.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005617735.1 COG0061 Predicted sugar kinase YP_005617736.1 COG2913 Small protein A (tmRNA-binding) YP_005617737.1 COG0278 Glutaredoxin-related protein YP_005617738.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005617739.1 COG0605 Superoxide dismutase YP_005617740.1 COG0193 Peptidyl-tRNA hydrolase YP_005617741.1 COG0012 Predicted GTPase, probable translation factor YP_005617742.1 COG0498 Threonine synthase YP_005617743.1 COG0083 Homoserine kinase YP_005617744.1 COG0527 Aspartokinases YP_005617745.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_005617746.1 COG0414 Panthothenate synthetase YP_005617747.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005617748.1 COG1734 DnaK suppressor protein YP_005617749.1 COG0101 Pseudouridylate synthase YP_005617750.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005617751.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005617752.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005617753.1 COG0237 Dephospho-CoA kinase YP_005617754.1 COG0516 IMP dehydrogenase/GMP reductase YP_005617755.1 COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component YP_005617756.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005617757.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005617759.1 COG1586 S-adenosylmethionine decarboxylase YP_005617760.1 COG0421 Spermidine synthase YP_005617761.1 COG0775 Nucleoside phosphorylase YP_005617762.1 COG0316 Uncharacterized conserved protein YP_005617763.1 COG0206 Cell division GTPase YP_005617764.1 COG0849 Actin-like ATPase involved in cell division YP_005617765.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005617767.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005617768.1 COG0772 Bacterial cell division membrane protein YP_005617769.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005617770.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005617771.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005617772.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005617773.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005617774.1 COG3116 Cell division protein YP_005617775.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005617776.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_005617777.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_005617778.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_005617779.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005617780.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005617781.1 COG0024 Methionine aminopeptidase YP_005617782.1 COG0052 Ribosomal protein S2 YP_005617783.1 COG0264 Translation elongation factor Ts YP_005617784.1 COG0528 Uridylate kinase YP_005617785.1 COG0233 Ribosome recycling factor YP_005617786.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005617787.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005617788.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005617789.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005617790.1 COG0587 DNA polymerase III, alpha subunit YP_005617791.1 COG0442 Prolyl-tRNA synthetase YP_005617792.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005617793.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005617794.1 COG0018 Arginyl-tRNA synthetase YP_005617795.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005617796.1 COG0328 Ribonuclease HI YP_005617797.1 COG0328 Ribonuclease HI YP_005617798.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005617799.1 COG0279 Phosphoheptose isomerase YP_005617800.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005617801.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005617802.1 COG2914 Uncharacterized protein conserved in bacteria YP_005617803.1 COG0691 tmRNA-binding protein YP_005617804.1 COG0590 Cytosine/adenosine deaminases YP_005617805.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005617806.1 COG1159 GTPase YP_005617807.1 COG0571 dsRNA-specific ribonuclease YP_005617808.1 COG0681 Signal peptidase I YP_005617809.1 COG0481 Membrane GTPase LepA YP_005617810.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005617811.1 COG2915 Uncharacterized protein involved in purine metabolism YP_005617812.1 COG0015 Adenylosuccinate lyase YP_005617813.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005617814.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005617815.1 COG4776 Exoribonuclease II YP_005617816.1 COG2095 Multiple antibiotic transporter YP_005617817.1 COG0321 Lipoate-protein ligase B YP_005617818.1 COG0320 Lipoate synthase YP_005617819.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005617820.1 COG0807 GTP cyclohydrolase II YP_005617821.1 COG2916 DNA-binding protein H-NS YP_005617822.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005617823.1 COG1607 Acyl-CoA hydrolase YP_005617824.1 COG2917 Intracellular septation protein A YP_005617826.1 COG0159 Tryptophan synthase alpha chain YP_005617827.1 COG0133 Tryptophan synthase beta chain YP_005617828.1 COG0134 Indole-3-glycerol phosphate synthase YP_005617829.1 COG0547 Anthranilate phosphoribosyltransferase YP_005617830.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005617831.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005617832.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005617833.1 COG0550 Topoisomerase IA YP_005617834.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005617835.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005617836.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005617837.1 COG0124 Histidyl-tRNA synthetase YP_005617838.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005617839.1 COG0132 Dethiobiotin synthetase YP_005617840.1 COG0502 Biotin synthase and related enzymes YP_005617841.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005617842.1 COG2706 3-carboxymuconate cyclase YP_005617843.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005617844.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005617845.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005617846.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005617847.1 COG0716 Flavodoxins YP_005617848.1 COG0415 Deoxyribodipyrimidine photolyase YP_005617849.1 COG0327 Uncharacterized conserved protein YP_005617850.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005617851.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005617852.1 COG0588 Phosphoglycerate mutase 1 YP_005617853.1 COG0205 6-phosphofructokinase YP_005617854.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_005617855.1 COG0149 Triosephosphate isomerase YP_005617856.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005617857.1 COG0539 Ribosomal protein S1 YP_005617858.1 COG0283 Cytidylate kinase YP_005617859.1 COG0283 Cytidylate kinase YP_005617860.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005617861.1 COG1932 Phosphoserine aminotransferase YP_005617862.1 COG0172 Seryl-tRNA synthetase YP_005617863.1 COG0492 Thioredoxin reductase YP_005617864.1 COG0361 Translation initiation factor 1 (IF-1) YP_005617865.1 COG0173 Aspartyl-tRNA synthetase YP_005617866.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005617867.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005617868.1 COG0469 Pyruvate kinase YP_005617869.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005617870.1 COG0501 Zn-dependent protease with chaperone function YP_005617871.1 COG1278 Cold shock proteins YP_005617873.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005617874.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005617875.1 COG0851 Septum formation topological specificity factor YP_005617876.1 COG2894 Septum formation inhibitor-activating ATPase YP_005617877.1 COG0850 Septum formation inhibitor YP_005617878.1 COG2813 16S RNA G1207 methylase RsmC YP_005617879.1 COG2813 16S RNA G1207 methylase RsmC YP_005617880.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005617881.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005617883.1 COG0418 Dihydroorotase YP_005617885.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_005617887.1 COG1815 Flagellar basal body protein YP_005617888.1 COG1558 Flagellar basal body rod protein YP_005617889.1 COG1843 Flagellar hook capping protein YP_005617890.1 COG1749 Flagellar hook protein FlgE YP_005617891.1 COG4787 Flagellar basal body rod protein YP_005617892.1 COG4786 Flagellar basal body rod protein YP_005617893.1 COG2063 Flagellar basal body L-ring protein YP_005617894.1 COG1706 Flagellar basal-body P-ring protein YP_005617895.1 COG3951 Rod binding protein YP_005617896.1 COG1256 Flagellar hook-associated protein YP_005617897.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005617898.1 COG0333 Ribosomal protein L32 YP_005617899.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005617900.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005617901.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005617902.1 COG0236 Acyl carrier protein YP_005617903.1 COG0125 Thymidylate kinase YP_005617904.1 COG0470 ATPase involved in DNA replication YP_005617905.1 COG0084 Mg-dependent DNase YP_005617906.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005617907.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005617908.1 COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) YP_005617909.1 COG3203 Outer membrane protein (porin) YP_005617910.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_005617911.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_005617913.1 COG0167 Dihydroorotate dehydrogenase YP_005617914.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_005617915.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005617916.1 COG1054 Predicted sulfurtransferase YP_005617917.1 COG0525 Valyl-tRNA synthetase YP_005617918.1 COG0260 Leucyl aminopeptidase YP_005617920.1 COG0078 Ornithine carbamoyltransferase YP_005617921.1 COG1781 Aspartate carbamoyltransferase, regulatory subunit YP_005617922.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005617923.1 COG0513 Superfamily II DNA and RNA helicases YP_005617924.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005617925.1 COG0184 Ribosomal protein S15P/S13E YP_005617926.1 COG0130 Pseudouridine synthase YP_005617927.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005617928.1 COG0195 Transcription elongation factor YP_005617931.1 COG1109 Phosphomannomutase YP_005617932.1 COG0465 ATP-dependent Zn proteases YP_005617933.1 COG0293 23S rRNA methylase YP_005617934.1 COG0782 Transcription elongation factor YP_005617935.1 COG5007 Predicted transcriptional regulator, BolA superfamily YP_005617936.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005617937.1 COG0261 Ribosomal protein L21 YP_005617938.1 COG0211 Ribosomal protein L27 YP_005617939.1 COG0536 Predicted GTPase YP_005617940.1 COG0103 Ribosomal protein S9 YP_005617941.1 COG0102 Ribosomal protein L13 YP_005617942.1 COG1605 Chorismate mutase YP_005617943.1 COG0228 Ribosomal protein S16 YP_005617944.1 COG0806 RimM protein, required for 16S rRNA processing YP_005617945.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005617946.1 COG0335 Ribosomal protein L19 YP_005617947.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_005617949.1 COG0757 3-dehydroquinate dehydratase II YP_005617950.1 COG2901 Factor for inversion stimulation Fis, transcriptional activator YP_005617951.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005617952.1 COG4105 DNA uptake lipoprotein YP_005617953.1 COG0013 Alanyl-tRNA synthetase YP_005617954.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005617955.1 COG2918 Gamma-glutamylcysteine synthetase YP_005617956.1 COG0192 S-adenosylmethionine synthetase YP_005617957.1 COG2356 Endonuclease I YP_005617958.1 COG1385 Uncharacterized protein conserved in bacteria YP_005617959.1 COG0120 Ribose 5-phosphate isomerase YP_005617960.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005617961.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005617962.1 COG0148 Enolase YP_005617963.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005617964.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005617965.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005617966.1 COG2919 Septum formation initiator YP_005617967.1 COG0529 Adenylylsulfate kinase and related kinases YP_005617968.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1 YP_005617969.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_005617970.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_005617972.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_005617973.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_005617974.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_005617975.1 COG0249 Mismatch repair ATPase (MutS family) YP_005617976.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005617977.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005617978.1 COG0218 Predicted GTPase YP_005617979.1 COG1217 Predicted membrane GTPase involved in stress response YP_005617980.1 COG0194 Guanylate kinase YP_005617981.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_005617982.1 COG1186 Protein chain release factor B YP_005617983.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005617984.1 COG0019 Diaminopimelate decarboxylase YP_005617985.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005617986.1 COG0207 Thymidylate synthase YP_005617987.1 COG0621 2-methylthioadenine synthetase YP_005617989.1 COG0319 Predicted metal-dependent hydrolase YP_005617990.1 COG4535 Putative Mg2+ and Co2+ transporter CorC YP_005617991.1 COG0495 Leucyl-tRNA synthetase YP_005617992.1 COG1466 DNA polymerase III, delta subunit YP_005617993.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005617994.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_005617995.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005617996.1 COG2095 Multiple antibiotic transporter YP_005617997.1 COG0126 3-phosphoglycerate kinase YP_005617998.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005617999.1 COG0668 Small-conductance mechanosensitive channel YP_005618000.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005618001.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005618002.1 COG0548 Acetylglutamate kinase YP_005618003.1 COG2821 Membrane-bound lytic murein transglycosylase YP_005618004.1 COG0054 Riboflavin synthase beta-chain YP_005618005.1 COG0611 Thiamine monophosphate kinase YP_005618006.1 COG0117 Pyrimidine deaminase YP_005618007.1 COG1985 Pyrimidine reductase, riboflavin biosynthesis YP_005618008.1 COG0781 Transcription termination factor YP_005618009.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005618010.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005618011.1 COG0477 Permeases of the major facilitator superfamily YP_005618012.1 COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit YP_005618013.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005618014.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_005618015.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005618016.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005618017.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005618018.1 COG0271 Stress-induced morphogen (activity unknown) YP_005618019.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005618020.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005618021.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005618022.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005618023.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005618024.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005618025.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005618026.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005618027.1 COG0718 Uncharacterized protein conserved in bacteria YP_005618028.1 COG0326 Molecular chaperone, HSP90 family YP_005618029.1 COG0563 Adenylate kinase and related kinases YP_005618030.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005618031.1 COG0215 Cysteinyl-tRNA synthetase YP_005618032.1 COG2921 Uncharacterized conserved protein YP_005618033.1 COG1278 Cold shock proteins YP_005618035.1 COG0169 Shikimate 5-dehydrogenase YP_005618036.1 COG0009 Putative translation factor (SUA5) YP_005618037.1 COG2922 Uncharacterized protein conserved in bacteria YP_005618038.1 COG0223 Methionyl-tRNA formyltransferase YP_005618039.1 COG0203 Ribosomal protein L17 YP_005618040.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005618041.1 COG0522 Ribosomal protein S4 and related proteins YP_005618042.1 COG0100 Ribosomal protein S11 YP_005618043.1 COG0099 Ribosomal protein S13 YP_005618044.1 COG0257 Ribosomal protein L36 YP_005618045.1 COG0201 Preprotein translocase subunit SecY YP_005618046.1 COG0200 Ribosomal protein L15 YP_005618047.1 COG1841 Ribosomal protein L30/L7E YP_005618048.1 COG0098 Ribosomal protein S5 YP_005618049.1 COG0256 Ribosomal protein L18 YP_005618050.1 COG0097 Ribosomal protein L6P/L9E YP_005618051.1 COG0096 Ribosomal protein S8 YP_005618052.1 COG0199 Ribosomal protein S14 YP_005618053.1 COG0094 Ribosomal protein L5 YP_005618054.1 COG0198 Ribosomal protein L24 YP_005618055.1 COG0093 Ribosomal protein L14 YP_005618056.1 COG0186 Ribosomal protein S17 YP_005618057.1 COG0255 Ribosomal protein L29 YP_005618058.1 COG0197 Ribosomal protein L16/L10E YP_005618059.1 COG0092 Ribosomal protein S3 YP_005618060.1 COG0091 Ribosomal protein L22 YP_005618061.1 COG0185 Ribosomal protein S19 YP_005618062.1 COG0090 Ribosomal protein L2 YP_005618063.1 COG0089 Ribosomal protein L23 YP_005618064.1 COG0088 Ribosomal protein L4 YP_005618065.1 COG0087 Ribosomal protein L3 YP_005618066.1 COG0051 Ribosomal protein S10 YP_005618067.1 COG0050 GTPases - translation elongation factors YP_005618068.1 COG0480 Translation elongation factors (GTPases) YP_005618069.1 COG0049 Ribosomal protein S7 YP_005618070.1 COG0048 Ribosomal protein S12 YP_005618071.1 COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur YP_005618072.1 COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur YP_005618073.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction YP_005618074.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005618075.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005618076.1 COG0477 Permeases of the major facilitator superfamily YP_005618077.1 COG0180 Tryptophanyl-tRNA synthetase YP_005618078.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005618079.1 COG0337 3-dehydroquinate synthetase YP_005618080.1 COG0703 Shikimate kinase YP_005618081.1 COG0813 Purine-nucleoside phosphorylase YP_005618082.1 COG1015 Phosphopentomutase YP_005618083.1 COG4108 Peptide chain release factor RF-3 YP_005618084.1 COG0316 Uncharacterized conserved protein YP_005618085.1 COG0629 Single-stranded DNA-binding protein YP_005618086.1 COG0305 Replicative DNA helicase YP_005618087.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_005618088.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005618089.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005618090.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005618091.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005618092.1 COG1194 A/G-specific DNA glycosylase YP_005618093.1 COG2924 Fe-S cluster protector protein YP_005618094.1 COG0796 Glutamate racemase YP_005618095.1 COG2925 Exonuclease I YP_005618096.1 COG2926 Uncharacterized protein conserved in bacteria YP_005618098.1 COG0461 Orotate phosphoribosyltransferase YP_005618099.1 COG0756 dUTPase YP_005618100.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005618101.1 COG0359 Ribosomal protein L9 YP_005618102.1 COG0238 Ribosomal protein S18 YP_005618103.1 COG0360 Ribosomal protein S6 YP_005618104.1 COG0557 Exoribonuclease R YP_005618105.1 COG0104 Adenylosuccinate synthase YP_005618106.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005618107.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005618108.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005618109.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005618110.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_005618111.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component YP_005618112.1 COG0166 Glucose-6-phosphate isomerase YP_005618113.1 COG1949 Oligoribonuclease (3'->5' exoribonuclease) YP_005618115.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005618116.1 COG0254 Ribosomal protein L31 YP_005618119.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005618120.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005618121.1 COG0071 Molecular chaperone (small heat shock protein) YP_005618122.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_005618123.1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) YP_005618124.1 COG0669 Phosphopantetheine adenylyltransferase YP_005618127.1 COG0500 SAM-dependent methyltransferases YP_005618128.1 COG0306 Phosphate/sulphate permeases YP_005618129.1 COG0477 Permeases of the major facilitator superfamily YP_005618130.1 COG0253 Diaminopimelate epimerase YP_005618131.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_005618132.1 COG0181 Porphobilinogen deaminase YP_005618133.1 COG1587 Uroporphyrinogen-III synthase YP_005618134.1 COG1587 Uroporphyrinogen-III synthase YP_005618135.1 COG1158 Transcription termination factor YP_005618136.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005618137.1 COG0210 Superfamily I DNA and RNA helicases YP_005618138.1 COG0059 Ketol-acid reductoisomerase YP_005618139.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005618140.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005618141.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005618142.1 COG1076 DnaJ-domain-containing proteins 1 YP_005618143.1 COG0443 Molecular chaperone YP_005618144.1 COG0633 Ferredoxin YP_005618146.1 COG1160 Predicted GTPases