-- dump date 20120504_140142 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 272560000001 SEQ_END SEQ_END NC_006350.1 4074542 4074542 DR NC_006350.1; contig end 4074542..4074542 Burkholderia pseudomallei K96243 272560000002 SEQ_END SEQ_END NC_006351.1 3173005 3173005 DR NC_006351.1; contig end 3173005..3173005 Burkholderia pseudomallei K96243 YP_106626.1 CDS BPSL0001 NC_006350.1 1 1116 R ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase complement(1..1116) Burkholderia pseudomallei K96243 3094483 YP_106627.1 CDS BPSL0002 NC_006350.1 1161 2375 R Similar to Ralstonia solanacearum hypothetical transmembrane protein RSC3299 or RS02528 SWALL:Q8XU94 (EMBL:AL646074) (407 aa) fasta scores: E(): 2.8e-63, 43.31% id in 404 aa. N-terminus is weakly similar to the N-terminal region of Escherichia coli glutathione-regulated potassium-efflux system protein KefB or TrkB SWALL:KEFB_ECOLI (SWALL:P45522) (601 aa) fasta scores: E(): 0.0018, 26.94% id in 360 aa; hypothetical protein complement(1161..2375) Burkholderia pseudomallei K96243 3094484 YP_106628.2 CDS mnmC NC_006350.1 3114 5096 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(3114..5096) Burkholderia pseudomallei K96243 3092684 YP_106629.1 CDS hupA NC_006350.1 5488 5766 D Previously sequenced as Burkholderia pseudomallei DNA-binding protein HU-alpha HupA or DbhA SWALL:DBHA_BURPS (SWALL:Q9ZF89) (92 aa) fasta scores: E(): 4.2e-29, 100% id in 92 aa. Similar to Ralstonia solanacearum probable DNA-binding protein HU-beta HupB2 or RSC2521 or RS01061 SWALL:Q8XWF3 (EMBL:AL646070) (94 aa) fasta scores: E(): 6.5e-17, 62.36% id in 93 aa; DNA-binding protein HU-alpha 5488..5766 Burkholderia pseudomallei K96243 3091972 YP_106630.1 CDS BPSL0005 NC_006350.1 5869 7209 R Previously sequenced as Burkholderia pseudomallei hypothetical 49.5 kDa protein SWALL:Q9ZF88 (EMBL:AF110185) (447 aa) fasta scores: E(): 1.7e-175, 96.42% id in 447 aa. Similar to Ralstonia solanacearum hypothetical protein RSC0045 or RS01868 SWALL:Q8Y3D5 (EMBL:AL646057) (424 aa) fasta scores: E(): 1.2e-52, 57.84% id in 446 aa; cobalamin synthesis protein/P47K complement(5869..7209) Burkholderia pseudomallei K96243 3092685 YP_106631.1 CDS BPSL0006 NC_006350.1 7528 8013 R Previously sequenced as Burkholderia pseudomallei hypothetical 18.2 kDa protein SWALL:Q9ZF87 (EMBL:AF110185) (161 aa) fasta scores: E(): 3.1e-65, 99.37% id in 161 aa. Similar to Shigella flexneri IpgF protein precursor SWALL:IPGF_SHIFL (SWALL:Q07568) (152 aa) fasta scores: E(): 1.4e-12, 37.58% id in 141 aa; hypothetical protein complement(7528..8013) Burkholderia pseudomallei K96243 3092172 YP_106632.1 CDS gspD NC_006350.1 8395 10668 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein D GspD SWALL:Q9ZF86 (EMBL:AF110185) (750 aa) fasta scores: E(): 0, 99.86% id in 750 aa. CDS is extended at the N-terminus in comparison to the previously sequenced protein. Similar to Erwinia chrysanthemi general secretion pathway protein D precursor OutD SWALL:GSPD_ERWCH (SWALL:P31700) (712 aa) fasta scores: E(): 2.5e-21, 33.23% id in 680 aa; general secretory pathway protein D 8395..10668 Burkholderia pseudomallei K96243 3091427 YP_106633.1 CDS gspE NC_006350.1 10665 12158 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein E GspE SWALL:Q9ZF85 (EMBL:AF110185) (497 aa) fasta scores: E(): 4.9e-168, 99.19% id in 497 aa. Similar to Erwinia carotovora general secretion pathway protein E OutE SWALL:GSPE_ERWCA (SWALL:P31703) (498 aa) fasta scores: E(): 2.9e-74, 53.09% id in 484 aa; general secretory pathway protein E 10665..12158 Burkholderia pseudomallei K96243 3091428 YP_106634.1 CDS gspF NC_006350.1 12163 13380 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein F GspF SWALL:Q9ZF84 (EMBL:AF110185) (405 aa) fasta scores: E(): 2.3e-145, 99.25% id in 405 aa. Similar to Erwinia carotovora general secretion pathway protein F OutF SWALL:GSPF_ERWCA (SWALL:P31705) (408 aa) fasta scores: E(): 9.6e-60, 43.1% id in 406 aa; general secretory pathway protein F 12163..13380 Burkholderia pseudomallei K96243 3092853 YP_106635.1 CDS gspC NC_006350.1 13452 13862 R Previously sequenced as Burkholderia pseudomallei protein essential for the secretion of exoproducts GspC SWALL:Q9ZF83 (EMBL:AF110185) (136 aa) fasta scores: E(): 8.2e-48, 100% id in 136 aa. Similar to the N-terminal region of Ralstonia solanacearum general secretion pathway related transmembrane protein GspC or RSC3105 or RS00558 SWALL:Q8XUT0 (EMBL:AL646073) (228 aa) fasta scores: E(): 8.9e-12, 42.33% id in 137 aa; general secretory pathway protein complement(13452..13862) Burkholderia pseudomallei K96243 3092040 YP_106636.1 CDS gspG NC_006350.1 14010 14462 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein G GspG SWALL:Q9ZF82 (EMBL:AF110185) (150 aa) fasta scores: E(): 2.1e-58, 100% id in 150 aa. Similar to Erwinia carotovora general secretion pathway protein G precursor OutG SWALL:GSPG_ERWCA (SWALL:P31586) (156 aa) fasta scores: E(): 2.5e-27, 53.57% id in 140 aa; general secretory pathway protein G 14010..14462 Burkholderia pseudomallei K96243 3092989 YP_106637.1 CDS gspH NC_006350.1 14617 15096 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein H GspH SWALL:Q9ZF81 (EMBL:AF110185) (159 aa) fasta scores: E(): 4.1e-60, 100% id in 159 aa. Similar to Erwinia carotovora general secretion pathway protein G precursor OutG SWALL:GSPG_ERWCA (SWALL:P31586) (156 aa) fasta scores: E(): 0.38, 29.73% id in 111 aa; general secretory pathway protein H 14617..15096 Burkholderia pseudomallei K96243 3092990 YP_106638.1 CDS gspI NC_006350.1 15099 15503 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein I GspI SWALL:Q9ZF80 (EMBL:AF110185) (134 aa) fasta scores: E(): 1.1e-49, 100% id in 134 aa. Similar to Pseudomonas aeruginosa general secretion pathway protein I precursor XcpV or PddC SWALL:GSPI_PSEAE (SWALL:Q00516) (129 aa) fasta scores: E(): 0.00019, 37% id in 100 aa; general secretory pathway protein I 15099..15503 Burkholderia pseudomallei K96243 3092326 YP_106639.1 CDS gspJ NC_006350.1 15481 16209 D N-terminal region is identical to the previously sequenced Burkholderia pseudomallei general secretory pathway protein J GspJ SWALL:Q9ZF79 (EMBL:AF110185) (217 aa) fasta scores: E(): 3.3e-70, 100% id in 192 aa. CDS differs from the previously sequenced protein in the C-terminal region. C-terminal region is similar to Burkholderia cepacia general secretory pathway protein GspJ SWALL:Q9F1P4 (EMBL:AB050004) (222 aa) fasta scores: E(): 3e-60, 75.67% id in 222 aa; general secretory pathway protein J 15481..16209 Burkholderia pseudomallei K96243 3092327 YP_106640.1 CDS gspK NC_006350.1 16391 17461 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein K GspK SWALL:Q9ZF78 (EMBL:AF110185) (356 aa) fasta scores: E(): 9.2e-126, 99.15% id in 356 aa. Similar to Erwinia carotovora general secretion pathway protein K OutK SWALL:GSPK_ERWCA (SWALL:P31706) (328 aa) fasta scores: E(): 0.59, 24.63% id in 345 aa; general secretory pathway protein K 16391..17461 Burkholderia pseudomallei K96243 3094007 YP_106641.1 CDS gspL NC_006350.1 17486 18916 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein L GspL SWALL:Q9ZF77 (EMBL:AF110185) (444 aa) fasta scores: E(): 3.1e-79, 95.67% id in 462 aa. CDS is extended at the N-terminus in comparison to the previously sequenced protein. CDS also contains extra internal amino acid residues (229 to 246) relative to the previously sequenced protein. C-terminal region is similar to Pseudomonas aeruginosa general secretion pathway protein L XcpY SWALL:GSPL_PSEAE (SWALL:P25060) (382 aa) fasta scores: E(): 0.75, 24.33% id in 378 aa; general secretory pathway protein L 17486..18916 Burkholderia pseudomallei K96243 3093877 YP_106642.1 CDS gspM NC_006350.1 18913 19419 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein M GspM SWALL:Q9ZF76 (EMBL:AF110185) (168 aa) fasta scores: E(): 3.3e-58, 100% id in 168 aa. Similar to Erwinia carotovora general secretion pathway protein M OutM SWALL:GSPM_ERWCA (SWALL:P31709) (164 aa) fasta scores: E(): 0.00098, 26.58% id in 158 aa; general secretory pathway protein M 18913..19419 Burkholderia pseudomallei K96243 3093878 YP_106643.1 CDS gspN NC_006350.1 19458 20249 D Previously sequenced as Burkholderia pseudomallei general secretory pathway protein N GspN SWALL:Q9ZF75 (EMBL:AF110185) (263 aa) fasta scores: E(): 1e-102, 100% id in 263 aa. Similar to Aeromonas hydrophila general secretion pathway protein N ExeN SWALL:GSPN_AERHY (SWALL:P41852) (252 aa) fasta scores: E(): 1.1, 24.8% id in 250 aa; general secretory pathway protein N 19458..20249 Burkholderia pseudomallei K96243 3093630 YP_106644.1 CDS BPSL0019 NC_006350.1 20480 22135 R Previously sequenced as Burkholderia pseudomallei hypothetical 56.3 kDa protein SWALL:Q9ZF74 (EMBL:AF110185) (541 aa) fasta scores: E(): 5e-157, 98% id in 551 aa. CDS contains extra internal amino acid residues (514 to 524) relative to the previously sequenced protein. Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.8e-33, 34.73% id in 501 aa; outer membrane efflux lipoprotein complement(20480..22135) Burkholderia pseudomallei K96243 3092173 YP_106645.1 CDS BPSL0020 NC_006350.1 22357 22629 R No significant database matches. Possible alternative upstream translational start site; hypothetical protein complement(22357..22629) Burkholderia pseudomallei K96243 3091507 YP_106646.1 CDS BPSL0021 NC_006350.1 22828 23319 D Previously sequenced as Burkholderia pseudomallei hypothetical 18.0 kDa protein SWALL:Q9ZF73 (EMBL:AF110185) (163 aa) fasta scores: E(): 3.8e-58, 99.38% id in 163 aa. Similar to Escherichia coli multiple antibiotic resistance protein MarR or SoxQ or CfxB or InaR SWALL:MARR_ECOLI (SWALL:P27245) (144 aa) fasta scores: E(): 9.1e-08, 35.38% id in 130 aa; MarR family transcriptional regulator 22828..23319 Burkholderia pseudomallei K96243 3091508 YP_106647.1 CDS BPSL0022 NC_006350.1 23466 25028 D Previously sequenced as Burkholderia pseudomallei hypothetical 55.5 kDa protein SWALL:Q9ZF72 (EMBL:AF110185) (520 aa) fasta scores: E(): 3e-195, 99.8% id in 520 aa. Similar to Escherichia coli multidrug resistance protein B EmrB SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 2.3e-105, 53.17% id in 504 aa. Similar to BPSS0538, 56.736% identity (57.834% ungapped) in 527 aa overlap ; BPSS1350, 56.546% identity (57.640% ungapped) in 527 aa overlap and to BPSL1915, 51.303% identity (51.303% ungapped) in 499 aa overlap; transporter protein 23466..25028 Burkholderia pseudomallei K96243 3091830 YP_106648.1 CDS BPSL0023 NC_006350.1 25088 26011 R Similar to Bacillus subtilis transcriptional regulatory protein GltC SWALL:GLTC_BACSU (SWALL:P20668) (300 aa) fasta scores: E(): 9.8e-21, 31.13% id in 273 aa, and to Salmonella typhimurium LysR family transcriptional regulator STM4270 SWALL:Q8ZKG0 (EMBL:AE008900) (295 aa) fasta scores: E(): 2.4e-47, 47.55% id in 286 aa; LysR family transcriptional regulator complement(25088..26011) Burkholderia pseudomallei K96243 3091831 YP_106649.1 CDS BPSL0024 NC_006350.1 26223 26621 D Similar to Pseudomonas aeruginosa hypothetical protein PA3432 SWALL:Q9HYH3 (EMBL:AE004764) (129 aa) fasta scores: E(): 5e-16, 46.78% id in 109 aa, and to Vibrio cholerae hypothetical protein VC2101 SWALL:Q9KQ99 (EMBL:AE004284) (146 aa) fasta scores: E(): 9.1e-13, 41.32% id in 121 aa; LrgA family protein 26223..26621 Burkholderia pseudomallei K96243 3093775 YP_106650.1 CDS BPSL0025 NC_006350.1 26690 27412 D Similar to Vibrio cholerae hypothetical protein VC2100 SWALL:Q9KQA0 (EMBL:AE004284) (229 aa) fasta scores: E(): 1.1e-42, 52.48% id in 221 aa, and to Salmonella typhi membrane protein STY4470 SWALL:Q8Z1R3 (EMBL:AL627282) (229 aa) fasta scores: E(): 4e-39, 48.87% id in 223 aa; hypothetical protein 26690..27412 Burkholderia pseudomallei K96243 3093776 YP_106651.2 CDS fliL NC_006350.1 28205 28747 D interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 28205..28747 Burkholderia pseudomallei K96243 3091889 YP_106652.1 CDS fliM NC_006350.1 28770 29768 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 28770..29768 Burkholderia pseudomallei K96243 3092027 YP_106653.1 CDS fliN NC_006350.1 29761 30258 D Similar to Ralstonia solanacearum probable flagellar motor switch protein RSP0377 or RS00805 SWALL:Q8XSU0 (EMBL:AL646078) (156 aa) fasta scores: E(): 4.9e-26, 61.07% id in 167 aa> C-terminal region is similar to Erwinia carotovora flagellar motor switch protein FliN or MopA SWALL:FLIN_ERWCA (SWALL:P35539) (106 aa) fasta scores: E(): 1.4e-21, 67.3% id in 104 aa. Possible alternative translational start site; flagellar motor switch protein 29761..30258 Burkholderia pseudomallei K96243 3092028 YP_106654.1 CDS fliO NC_006350.1 30426 30920 D Similar to Escherichia coli flagellar protein FliO or FlbD or FlaP SWALL:FLIO_ECOLI (SWALL:P22586) (121 aa) fasta scores: E(): 1.1e-05, 43% id in 100 aa, and to Erwinia carotovora MopB protein SWALL:MOPB_ERWCA (SWALL:P34199) (140 aa) fasta scores: E(): 3.6e-05, 38.31% id in 107 aa; flagellar protein 30426..30920 Burkholderia pseudomallei K96243 3093248 YP_106655.1 CDS fliP NC_006350.1 30991 31752 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 30991..31752 Burkholderia pseudomallei K96243 3092828 YP_106656.1 CDS fliQ NC_006350.1 31778 32050 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 31778..32050 Burkholderia pseudomallei K96243 3092829 YP_106657.1 CDS fliR NC_006350.1 32169 32951 D Similar to Escherichia coli flagellar biosynthetic protein FliR or FlaP SWALL:FLIR_ECOLI (SWALL:P33135) (261 aa) fasta scores: E(): 4.8e-40, 47.75% id in 245 aa, and to Erwinia carotovora flagellar biosynthetic protein FliR or MopE SWALL:FLIR_ERWCA (SWALL:P34202) (261 aa) fasta scores: E(): 7.2e-42, 47.45% id in 255 aa; flagellar biosynthetic protein 32169..32951 Burkholderia pseudomallei K96243 3091494 YP_106658.1 CDS BPSL0033 NC_006350.1 33271 33699 R Similar to Rhizobium leguminosarum transcriptional regulator HmrR SWALL:HMMR_RHILV (SWALL:Q9X5V4) (129 aa) fasta scores: E(): 1.2e-06, 33.33% id in 132 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA5116 SWALL:Q9HU68 (EMBL:AE004924) (141 aa) fasta scores: E(): 3.3e-33, 72.66% id in 139 aa; MerR family transcriptional regulator complement(33271..33699) Burkholderia pseudomallei K96243 3091890 YP_106659.1 CDS BPSL0034 NC_006350.1 33781 34656 D Similar to Rhizobium loti hypothetical protein MLR5379 SWALL:Q98BY2 (EMBL:AP003006) (281 aa) fasta scores: E(): 3.2e-50, 51.29% id in 271 aa, and to Caulobacter crescentus methlytransferase, UbiE-Coq5 family CC3495 SWALL:Q9A2R1 (EMBL:AE006008) (276 aa) fasta scores: E(): 2.6e-42, 46.46% id in 269 aa; hypothetical protein 33781..34656 Burkholderia pseudomallei K96243 3092235 YP_106660.1 CDS BPSL0035 NC_006350.1 34649 35170 D Similar to Rhizobium loti hypothetical protein MLL7507 SWALL:Q985V9 (EMBL:AP003012) (167 aa) fasta scores: E(): 3.4e-18, 42.46% id in 146 aa, and to Agrobacterium tumefaciens hypothetical protein ATU2174 or AGR_C_3945 SWALL:Q8UDF3 (EMBL:AE009168) (169 aa) fasta scores: E(): 1.8e-16, 37.5% id in 144 aa; hypothetical protein 34649..35170 Burkholderia pseudomallei K96243 3092236 YP_106661.1 CDS BPSL0036 NC_006350.1 35328 36341 D Similar to Rhizobium loti ABC transporter substrate-binding protein MLR7949 SWALL:Q984L7 (EMBL:AP003013) (337 aa) fasta scores: E(): 4e-65, 60.85% id in 327 aa, and to Ralstonia solanacearum hypothetical signal peptide protein rsc3391 or rs05672 SWALL:Q8XU03 (EMBL:AL646075) (328 aa) fasta scores: E(): 8.4e-68, 60.63% id in 315 aa; transport protein 35328..36341 Burkholderia pseudomallei K96243 3094577 YP_106662.1 CDS BPSL0037 NC_006350.1 36425 37222 D Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1199 or rs02665 SWALL:Q8Y045 (EMBL:AL646063) (270 aa) fasta scores: E(): 1.5e-46, 54.44% id in 259 aa, and to the C-terminal region of Rhizobium loti ABC transporter ATP-binding protein mlr7950 SWALL:Q984L6 (EMBL:AP003013) (300 aa) fasta scores: E(): 9.9e-67, 72.97% id in 259 aa; ATP-binding ABC transporter protein 36425..37222 Burkholderia pseudomallei K96243 3094578 YP_106663.1 CDS BPSL0038 NC_006350.1 37241 38098 D Similar to Rhizobium loti ABC transporter permease mlr7951 SWALL:Q984L5 (EMBL:AP003013) (292 aa) fasta scores: E(): 7.7e-64, 60.96% id in 269 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4260 or agr_l_1202 SWALL:Q8U839 (EMBL:AE009355) (265 aa) fasta scores: E(): 7.8e-39, 45.93% id in 246 aa; binding-protein-dependent transport systems inner membrane component 37241..38098 Burkholderia pseudomallei K96243 3094681 YP_106664.1 CDS BPSL0039 NC_006350.1 38176 39555 D Two-component regulatory system family, sensor kinase. Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 7.1e-23, 28.06% id in 449 aa, and to Rhizobium loti two-component system, sensor protein mll7952 SWALL:Q984L4 (EMBL:AP003013) (452 aa) fasta scores: E(): 3.7e-56, 41.75% id in 455 aa; sensor kinase 38176..39555 Burkholderia pseudomallei K96243 3094682 YP_106665.1 CDS BPSL0040 NC_006350.1 39566 40243 D Two-component regulatory system family, response regulator protein. Similar to Salmonella typhimurium transcriptional regulatory protein TctD SWALL:TCTD_SALTY (SWALL:P22104) (224 aa) fasta scores: E(): 2.9e-35, 48.43% id in 223 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3392 or rs05673 SWALL:Q8XU02 (EMBL:AL646075) (224 aa) fasta scores: E(): 1.5e-47, 58.44% id in 219 aa; response regulator protein 39566..40243 Burkholderia pseudomallei K96243 3093986 YP_106666.1 CDS BPSL0041 NC_006350.1 40566 41693 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.8e-13, 28.26% id in 414 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc3390 or rs05671 SWALL:Q8XU04 (EMBL:AL646075) (376 aa) fasta scores: E(): 6.2e-77, 54.33% id in 381 aa; outer membrane porin lipoprotein 40566..41693 Burkholderia pseudomallei K96243 3093987 YP_106667.1 CDS BPSL0042 NC_006350.1 42169 44181 D Similar to Escherichia coli type III restriction-modification system EcoP15I enzyme Mod SWALL:T3MO_ECOLI (SWALL:P12364) (645 aa) fasta scores: E(): 3.5e-39, 30.38% id in 655 aa, and to Chlorobium tepidum TLS type III restriction system methylase Mod SWALL:AAM72143 (EMBL:AE012856) (669 aa) fasta scores: E(): 1.7e-190, 67.66% id in 671 aa; type III restriction-modification system methylase 42169..44181 Burkholderia pseudomallei K96243 3092538 YP_106668.1 CDS BPSL0043 NC_006350.1 44222 47251 D Similar to Chlorobium tepidum TLS type III restriction system endonuclease Res SWALL:AAM72146 (EMBL:AE012856) (991 aa) fasta scores: E(): 0, 66.83% id in 998 aa, and to Fusobacterium nucleatum type III restriction-modification system restriction subunit FN0417 SWALL:Q8RG91 (EMBL:AE010553) (997 aa) fasta scores: E(): 1.1e-151, 43.51% id in 1002 aa; type III restriction system endonuclease 44222..47251 Burkholderia pseudomallei K96243 3092539 YP_106669.1 CDS BPSL0044 NC_006350.1 47789 48889 D Similar to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1.4e-22, 38.08% id in 386 aa, and to Ralstonia solanacearum probable porin precursor transmembrane protein rsp0337 or rs00714 SWALL:Q8XSY0 (EMBL:AL646078) (351 aa) fasta scores: E(): 1.2e-18, 34.13% id in 331 aa; outer membrane porin 47789..48889 Burkholderia pseudomallei K96243 3093858 YP_106670.1 CDS BPSL0045 NC_006350.1 49289 50248 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa4070 SWALL:Q9HWV8 (EMBL:AE004823) (316 aa) fasta scores: E(): 1.1e-17, 30.39% id in 306 aa. C-terminus is similar to the C-terminal region of Escherichia coli transcriptional activator FeaR or MaoR or MaoB SWALL:FEAR_ECOLI (SWALL:Q47129) (301 aa) fasta scores: E(): 9.5e-14, 30.61% id in 245 aa; AraC family transcriptional regulator 49289..50248 Burkholderia pseudomallei K96243 3093859 YP_106671.1 CDS BPSL0046 NC_006350.1 50371 51102 R Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 6.3e-22, 39.35% id in 216 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport ATP-binding protein bmeii0119 SWALL:Q8YDQ6 (EMBL:AE009650) (234 aa) fasta scores: E(): 2.3e-24, 39.73% id in 229 aa; ABC transport system ATP-binding protein complement(50371..51102) Burkholderia pseudomallei K96243 3092441 YP_106672.1 CDS BPSL0047 NC_006350.1 51475 52197 R Similar to Rhizobium meliloti high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein R02584 or smc02357 SWALL:Q92MM9 (EMBL:AL591791) (244 aa) fasta scores: E(): 2.1e-18, 37.44% id in 235 aa, and to Rhizobium loti branched-chain amino acid ABC transporter ATP-binding protein mll4886 SWALL:Q98D29 (EMBL:AP003005) (241 aa) fasta scores: E(): 2.6e-17, 37.23% id in 239 aa; ABC transport system ATP-binding protein complement(51475..52197) Burkholderia pseudomallei K96243 3092442 YP_106673.1 CDS BPSL0048 NC_006350.1 52194 53243 R Similar to Aeropyrum pernix hypothetical high-affinity branched-chain amino acid transport permease APE1304 SWALL:Q9YCF3 (EMBL:AP000061) (349 aa) fasta scores: E(): 1.8e-10, 26.99% id in 326 aa. C-terminal region is similar to the N-terminal region of Brucella melitensis high-affinity branched-chain amino acid transport system permease LivM / high-affinity branched-chain amino acid transport ATP-binding protein LivG bmeii0120 SWALL:Q8YDQ5 (EMBL:AE009650) (515 aa) fasta scores: E(): 2.8e-13, 34.29% id in 277 aa; hypothetical protein complement(52194..53243) Burkholderia pseudomallei K96243 3092017 YP_106674.1 CDS BPSL0049 NC_006350.1 53240 54118 R Similar to Brucella melitensis high-affinity branched-chain amino acid transport system permease bmeii0121 SWALL:Q8YDQ4 (EMBL:AE009650) (292 aa) fasta scores: E(): 1.3e-19, 30.99% id in 271 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu5524 or agr_pat_780 SWALL:Q8UJF3 (EMBL:AE008972) (298 aa) fasta scores: E(): 6.4e-16, 28.36% id in 282 aa; branched-chain amino acid transport system permease complement(53240..54118) Burkholderia pseudomallei K96243 3092018 YP_106675.1 CDS BPSL0050 NC_006350.1 54123 55382 R N-terminus is weakly similar to N-terminal regions of Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 0.0088, 22.61% id in 367 aa, and to Ralstonia solanacearum probable leu/ile/val-binding signal peptide protein rsc2864 or rs00241 SWALL:Q8XVG7 (EMBL:AL646072) (385 aa) fasta scores: E(): 2.9e-05, 25% id in 360 aa. CDS is a possible lipoprotein, but has a poor N-terminal signal sequence; hypothetical protein complement(54123..55382) Burkholderia pseudomallei K96243 3094741 YP_106676.1 CDS BPSL0051 NC_006350.1 55599 57104 R Similar to Escherichia coli phenylacetaldehyde dehydrogenase FeaB or PadA or MaoB SWALL:FEAB_ECOLI (SWALL:P80668) (499 aa) fasta scores: E(): 2.5e-88, 49.79% id in 498 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa4073 SWALL:Q9HWV5 (EMBL:AE004823) (495 aa) fasta scores: E(): 1.1e-114, 62.29% id in 488 aa. Similar to BPSS0868, 59.714% identity (60.707% ungapped) in 489 aa overlap. Similar to BPSS0868, 59.714% identity (60.707% ungapped) in 489 aa overlap; phenylacetaldehyde dehydrogenase complement(55599..57104) Burkholderia pseudomallei K96243 3094742 YP_106677.1 CDS BPSL0052 NC_006350.1 57160 57552 R Similar to Pseudomonas aeruginosa hypothetical protein pa1817 SWALL:Q9I2S8 (EMBL:AE004608) (129 aa) fasta scores: E(): 5e-26, 56.69% id in 127 aa, and to Agrobacterium tumefaciens hypothetical protein atu4878 or agr_l_27 SWALL:Q8U6C9 (EMBL:AE009416) (137 aa) fasta scores: E(): 0.002, 23.84% id in 130 aa; hypothetical protein complement(57160..57552) Burkholderia pseudomallei K96243 3093596 YP_106678.1 CDS BPSL0053 NC_006350.1 57563 58372 R Similar to Klebsiella aerogenes MoaF protein precursor SWALL:MOAF_KLEAE (SWALL:P54796) (262 aa) fasta scores: E(): 1.3e-16, 31.81% id in 242 aa, and to Pseudomonas aeruginosa hypothetical protein pa4087 SWALL:Q9HWU1 (EMBL:AE004825) (274 aa) fasta scores: E(): 1.2e-16, 31.95% id in 266 aa; hypothetical protein complement(57563..58372) Burkholderia pseudomallei K96243 3093597 YP_106679.1 CDS BPSL0054 NC_006350.1 58418 59215 R Similar to Klebsiella aerogenes MoaE protein SWALL:MOAE_KLEAE (SWALL:P54795) (257 aa) fasta scores: E(): 8.1e-33, 46.18% id in 262 aa, and to Escherichia coli oxidoreductase UcpA SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 3.2e-22, 36.68% id in 259 aa; short chain dehydrogenase complement(58418..59215) Burkholderia pseudomallei K96243 3093902 YP_106680.1 CDS BPSL0055 NC_006350.1 59300 60970 R Similar to Pseudomonas oleovorans alcohol dehydrogenase [acceptor] AlkJ or AlcO SWALL:ALKJ_PSEOL (SWALL:Q00593) (558 aa) fasta scores: E(): 6.6e-88, 45.17% id in 549 aa, and to Rhizobium loti probable dehydrogenase mll1008 SWALL:Q98LI5 (EMBL:AP002996) (537 aa) fasta scores: E(): 2.7e-92, 46.45% id in 536 aa; glucose-methanol-choline (GMC) oxidoreductase complement(59300..60970) Burkholderia pseudomallei K96243 3093903 YP_106681.1 CDS BPSL0056 NC_006350.1 61697 62038 D Similar to Clostridium acetobutylicum predicted transcriptional regulator cac0571 SWALL:Q97LI9 (EMBL:AE007572) (107 aa) fasta scores: E(): 1.3e-20, 57% id in 100 aa, and to Caulobacter crescentus hypothetical protein CC3408 SWALL:Q9A2Z8 (EMBL:AE006001) (108 aa) fasta scores: E(): 2.1e-20, 57% id in 100 aa; PadR-like family transcriptional regulator 61697..62038 Burkholderia pseudomallei K96243 3093581 YP_106682.1 CDS BPSL0057 NC_006350.1 62035 63222 D No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of Caulobacter crescentus hypothetical protein CC3409 SWALL:Q9A2Z7 (EMBL:AE006001) (187 aa) fasta scores: E(): 1.9e-11, 37.93% id in 145 aa, and Listeria innocua hypothetical protein lin0609 SWALL:Q92E52 (EMBL:AL596165) (196 aa) fasta scores: E(): 0.057, 27.27% id in 176 aa; hypothetical protein 62035..63222 Burkholderia pseudomallei K96243 3093582 YP_106683.1 CDS BPSL0058 NC_006350.1 63895 64881 R Similar to Synechocystis sp. fatty acid desaturase DesA SWALL:DESA_SYNY3 (SWALL:P20388) (351 aa) fasta scores: E(): 3.3e-05, 23.58% id in 335 aa, and to Caulobacter crescentus hypothetical protein CC3422 SWALL:Q9A2Y4 (EMBL:AE006002) (329 aa) fasta scores: E(): 1.5e-20, 40% id in 330 aa; fatty acid desaturase complement(63895..64881) Burkholderia pseudomallei K96243 3091707 YP_106684.1 CDS BPSL0059 NC_006350.1 64911 65747 R Poor database matches. Weakly similar to Sulfolobus solfataricus ring oxydation complex/ phenylacetic acid degradation related protein SSO2022 SWALL:Q97WU2 (EMBL:AE006809) (266 aa) fasta scores: E(): 0.0008, 23% id in 226 aa; hypothetical protein complement(64911..65747) Burkholderia pseudomallei K96243 3091708 YP_106685.1 CDS BPSL0060 NC_006350.1 66187 67281 R Similar to Streptomyces coelicolor transcriptional regulator sco6746 or SC5f2A.29 SWALL:Q9X7Q2 (EMBL:AL049587) (325 aa) fasta scores: E(): 1.5e-15, 31.15% id in 337 aa, and to Xanthomonas axonopodis pv. citri str. 306 transcriptional regulator AraC family AdpA SWALL:AAM38899 (EMBL:AE012054) (336 aa) fasta scores: E(): 2.8e-14, 29.73% id in 333 aa; AraC family transcriptional regulator complement(66187..67281) Burkholderia pseudomallei K96243 3094177 YP_106686.1 CDS BPSL0061 NC_006350.1 67394 68530 D Similar to the C-terminal region of Homo sapiens acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor ACADL SWALL:ACDL_HUMAN (SWALL:P28330) (430 aa) fasta scores: E(): 3.3e-80, 54.64% id in 377 aa, and to the full length Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa4435 SWALL:Q9HVY0 (EMBL:AE004858) (381 aa) fasta scores: E(): 1.2e-108, 69.84% id in 378 aa; acyl-CoA dehydrogenase 67394..68530 Burkholderia pseudomallei K96243 3094178 YP_106687.1 CDS BPSL0062 NC_006350.1 69196 70401 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 69196..70401 Burkholderia pseudomallei K96243 3093660 YP_106688.1 CDS BPSL0063 NC_006350.1 70414 72537 D Similar to Pseudomonas fragi fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3- hydroxybutyryl-CoA epimerase] FaoA SWALL:FAOB_PSEFR (SWALL:P28793) (715 aa) fasta scores: E(): 5e-65, 36.06% id in 721 aa, and to Caulobacter crescentus fatty oxidation complex, alpha subunit CC0076 SWALL:Q9ABZ4 (EMBL:AE005681) (709 aa) fasta scores: E(): 8.9e-130, 55.26% id in 684 aa; fatty oxidation complex subunit alpha 70414..72537 Burkholderia pseudomallei K96243 3093661 YP_106689.1 CDS BPSL0064 NC_006350.1 72925 74058 D Similar to Homo sapiens alpha-methylacyl-CoA racemase AMACR SWALL:AMAC_HUMAN (SWALL:Q9UHK6) (382 aa) fasta scores: E(): 1.9e-50, 41.17% id in 374 aa, and to Rhizobium loti probable fatty acid CoA racemase mlr2316 SWALL:Q98IP3 (EMBL:AP002999) (389 aa) fasta scores: E(): 1e-77, 57.89% id in 380 aa; alpha-methylacyl-CoA racemase 72925..74058 Burkholderia pseudomallei K96243 3094272 YP_106690.1 CDS BPSL0065 NC_006350.1 74135 74701 R Poor database matches. Similar to an internal region of Thermotoga maritima chaperonin TM1394 SWALL:HSLO_THEMA (SWALL:Q9X1B4) (290 aa) fasta scores: E(): 6.9, 26.94% id in 167 aa; lipoprotein complement(74135..74701) Burkholderia pseudomallei K96243 3094273 YP_106691.1 CDS BPSL0066 NC_006350.1 75037 75501 R Poor database matches. Similar to Ralstonia solanacearum probable lipoprotein rsc2710 or rs00012 SWALL:Q8XVW7 (EMBL:AL646071) (146 aa) fasta scores: E(): 4.9e-15, 44.37% id in 151 aa; hypothetical protein complement(75037..75501) Burkholderia pseudomallei K96243 3091815 YP_106692.1 CDS BPSL0067 NC_006350.1 76057 76497 D Poor database matches. C-terminal region is similar to Salmonella typhi hypothetical protein STY0300 SWALL:Q8Z969 (EMBL:AL627266) (133 aa) fasta scores: E(): 0.0034, 33.91% id in 115 aa; hypothetical protein 76057..76497 Burkholderia pseudomallei K96243 3091816 YP_106693.1 CDS BPSL0068 NC_006350.1 76484 76852 D Poor database matches. Similar to the N-terminus of Streptomyces coelicolor membrane protein sco0399 or SCF62.25 SWALL:Q9RJI9 (EMBL:AL121855) (407 aa) fasta scores: E(): 6, 34.95% id in 103 aa; lipoprotein 76484..76852 Burkholderia pseudomallei K96243 3093713 YP_106694.1 CDS BPSL0069 NC_006350.1 77520 78278 R Similar to Pseudomonas fluorescens transmembrane regulator PrtR SWALL:Q9KIN0 (EMBL:AF228766) (242 aa) fasta scores: E(): 2.2e-34, 47.45% id in 236 aa, and to Xanthomonas axonopodis pv. citri str. 306 transmembrane regulator protein PrtR SWALL:AAM38824 (EMBL:AE012047) (250 aa) fasta scores: E(): 2.5e-26, 40.63% id in 251 aa; transmembrane regulator complement(77520..78278) Burkholderia pseudomallei K96243 3093714 YP_106695.1 CDS BPSL0070 NC_006350.1 78275 78790 R Similar to Pseudomonas fluorescens RNA polymerase sigma factor PrtI SWALL:Q9KIM9 (EMBL:AF228767) (165 aa) fasta scores: E(): 1.5e-36, 61.67% id in 167 aa, and to Xanthomonas axonopodis pv. citri str. 306 ecf sigma factor PrtI SWALL:AAM38825 (EMBL:AE012047) (171 aa) fasta scores: E(): 3.9e-32, 56.97% id in 172 aa; RNA polymerase sigma factor complement(78275..78790) Burkholderia pseudomallei K96243 3092412 YP_106696.1 CDS BPSL0071 NC_006350.1 78951 80036 D Similar to the N-terminal region of Nicotiana tabacum catalase isozyme 1 CAT-1 SWALL:CAT1_TOBAC (SWALL:P49319) (492 aa) fasta scores: E(): 1.1e-06, 26.54% id in 324 aa, and to the full length Xanthomonas campestris pv. campestris str. ATCC 33913 catalase SrpA SWALL:AAM43127 (EMBL:AE012511) (363 aa) fasta scores: E(): 5.7e-59, 49.09% id in 330 aa. Possible alternative translational start site; catalase 78951..80036 Burkholderia pseudomallei K96243 3092413 YP_106697.1 CDS BPSL0072 NC_006350.1 80033 80560 D Similar to Escherichia coli cytochrome b561 CybB SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 1.5e-07, 31.66% id in 180 aa, and to Xanthomonas axonopodis pv. citri str. 306 cytochrome b561 YodB SWALL:AAM38827 (EMBL:AE012047) (180 aa) fasta scores: E(): 7.9e-37, 60% id in 170 aa; type-b cytochrome 80033..80560 Burkholderia pseudomallei K96243 3091482 YP_106698.1 CDS gyrB NC_006350.1 81428 83896 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(81428..83896) Burkholderia pseudomallei K96243 3091483 YP_106699.1 CDS dnaN NC_006350.1 84085 85188 R binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta complement(84085..85188) Burkholderia pseudomallei K96243 3092204 YP_106700.1 CDS dnaA NC_006350.1 85351 86952 R binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein complement(85351..86952) Burkholderia pseudomallei K96243 3093573 YP_106701.1 CDS rpmH NC_006350.1 87398 87532 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 87398..87532 Burkholderia pseudomallei K96243 3094113 YP_106702.1 CDS rnpA NC_006350.1 87606 88016 D Similar to Escherichia coli ribonuclease P protein component RnpA SWALL:RNPA_ECOLI (SWALL:P06277) (119 aa) fasta scores: E(): 2.3e-05, 36.63% id in 101 aa, and to Ralstonia solanacearum probable ribonuclease P protein component rsc0002 or rs01824 SWALL:Q8Y3H8 (EMBL:AL646057) (131 aa) fasta scores: E(): 1.3e-17, 52.25% id in 111 aa; ribonuclease P protein component 87606..88016 Burkholderia pseudomallei K96243 3092170 YP_106703.1 CDS BPSL0077 NC_006350.1 88096 88365 D Similar to Ralstonia solanacearum hypothetical protein rsc0003 or rs01825 SWALL:Q8Y3H7 (EMBL:AL646057) (104 aa) fasta scores: E(): 1.4e-17, 62.66% id in 75 aa, and to Pseudomonas aeruginosa hypothetical protein pa2045 SWALL:YK45_PSEAE (SWALL:Q9I270) (86 aa) fasta scores: E(): 6.6e-16, 65.21% id in 69 aa; hypothetical protein 88096..88365 Burkholderia pseudomallei K96243 3094114 YP_106704.1 CDS BPSL0078 NC_006350.1 88374 90050 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 88374..90050 Burkholderia pseudomallei K96243 3093552 YP_106705.1 CDS BPSL0079 NC_006350.1 90207 90668 R No significant database matches. Doubtful CDS. Similar to BPSS2172, 81.818% identity (82.500% ungapped) in 121 aa overlap. Possible alternative translational start sites; hypothetical protein complement(90207..90668) Burkholderia pseudomallei K96243 3093553 YP_106706.1 CDS trmE NC_006350.1 90964 92367 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 90964..92367 Burkholderia pseudomallei K96243 3093677 YP_106707.1 CDS intA NC_006350.1 92536 93765 D Similar to Escherichia coli prophage cp4-57 integrase IntA or SlpA or IntX SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 3.9e-38, 33.57% id in 408 aa, and to Ralstonia solanacearum integrase rsc2489 or rs01107 SWALL:Q8XWI5 (EMBL:AL646070) (417 aa) fasta scores: E(): 1.7e-45, 38.15% id in 401 aa; phage integrase 92536..93765 Burkholderia pseudomallei K96243 3093479 YP_106708.1 CDS BPSL0082 NC_006350.1 94413 97280 R No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Salmonella typhimurium inner membrane protein STM2745 SWALL:Q8ZMQ9 (EMBL:AE008824) (689 aa) fasta scores: E(): 2.4e-63, 35.3% id in 609 aa. Internal region is similar to the internal region of Escherichia coli DNA primase TraC SWALL:TRC4_ECOLI (SWALL:P27189) (1061 aa) fasta scores: E(): 3.1e-22, 39.32% id in 267 aa. Similar to BPSS0382 (956 aa) fasta scores: E(): 0, 91.832% identity in 955 aa overlap; hypothetical protein complement(94413..97280) Burkholderia pseudomallei K96243 3092581 YP_106709.1 CDS BPSL0083 NC_006350.1 97405 97746 R hypothetical protein complement(97405..97746) Burkholderia pseudomallei K96243 3092582 YP_106710.1 CDS BPSL0084 NC_006350.1 97743 98000 R hypothetical protein complement(97743..98000) Burkholderia pseudomallei K96243 3094005 YP_106711.1 CDS BPSL0085 NC_006350.1 97993 98169 R Similar to Ralstonia solanacearum hypothetical protein rsc0965 or rs04404 SWALL:Q8Y0S8 (EMBL:AL646062) (58 aa) fasta scores: E(): 7.2e-05, 51.11% id in 45 aa, and to N-terminal region of Streptomyces coelicolor acetyltransferase sco0630 or SCF56.14c SWALL:Q9RD52 (EMBL:AL133424) (173 aa) fasta scores: E(): 6.8, 39.58% id in 48 aa; hypothetical protein complement(97993..98169) Burkholderia pseudomallei K96243 3094006 YP_106712.1 CDS BPSL0086 NC_006350.1 98537 99016 R Poor database matches. Weakly similar to N-terminal regions of Neisseria meningitidis DNA repair protein NMA0992 SWALL:Q9JV51 (EMBL:AL162754) (459 aa) fasta scores: E(): 7.2, 25.67% id in 148 aa, and Ralstonia solanacearum hypothetical protein rsc3362 or rs02637 SWALL:Q8XU32 (EMBL:AL646074) (276 aa) fasta scores: E(): 4, 29.93% id in 147 aa; hypothetical protein complement(98537..99016) Burkholderia pseudomallei K96243 3091698 YP_106713.1 CDS BPSL0087 NC_006350.1 99409 99930 R DNA-binding protein complement(99409..99930) Burkholderia pseudomallei K96243 3091699 YP_106714.1 CDS BPSL0088 NC_006350.1 100338 101255 R Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsp0267 or rs03699 SWALL:Q8XT48 (EMBL:AL646077) (287 aa) fasta scores: E(): 3e-27, 34.94% id in 289 aa, and to Mycobacterium tuberculosis hypothetical protein RV0836c or MT0857 or MTV043.29c SWALL:O53848 (EMBL:AL022004) (248 aa) fasta scores: E(): 3.4e-08, 29.96% id in 247 aa; hypothetical protein complement(100338..101255) Burkholderia pseudomallei K96243 3093680 YP_106715.1 CDS BPSL0089 NC_006350.1 101248 102249 R No significant database matches to the full length CDS. C-terminus is similar to C-terminal regions of Ralstonia solanacearum hypothetical protein rsp0266 or rs03700 SWALL:Q8XT49 (EMBL:AL646077) (370 aa) fasta scores: E(): 1.3e-24, 35.66% id in 272 aa, and Corynebacterium glutamicum ATCC 13032 hypothetical protein CGl2790 SWALL:BAC00184 (EMBL:AP005282) (375 aa) fasta scores: E(): 3.6e-07, 26.04% id in 311 aa; hypothetical protein complement(101248..102249) Burkholderia pseudomallei K96243 3093681 YP_106716.1 CDS BPSL0090 NC_006350.1 102609 103439 R Similar to Ralstonia solanacearum ISRso14-transposase OrfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 7.1e-98, 86.86% id in 274 aa, and to Pseudomonas aeruginosa hypothetical protein pa0987 SWALL:Q9I4Y2 (EMBL:AE004531) (280 aa) fasta scores: E(): 4.2e-77, 70.49% id in 261 aa; transposase complement(102609..103439) Burkholderia pseudomallei K96243 3093912 YP_106717.1 CDS BPSL0091 NC_006350.1 103466 103729 R Identical to Burkholderia cepacia insertion element IS407 hypothetical 10.0 kDa protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa. Similar to Ralstonia solanacearum ISRso14-transposase OrfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa; transposase complement(103466..103729) Burkholderia pseudomallei K96243 3093913 YP_106718.1 CDS BPSL0092 NC_006350.1 104028 104915 R Poor database matches. Weakly similar to internal region of Synechocystis sp. lipoprotein NlpD or SLR0993 SWALL:P74517 (EMBL:D90915) (715 aa) fasta scores: E(): 3.7, 22.95% id in 257 aa; lipoprotein complement(104028..104915) Burkholderia pseudomallei K96243 3094375 YP_106719.1 CDS BPSL0093 NC_006350.1 105283 106440 D Poor database matches. Similar to Ralstonia solanacearum probable lipoprotein rsc2263 or rs01296 SWALL:Q8XX53 (EMBL:AL646069) (391 aa) fasta scores: E(): 4.8e-89, 67.09% id in 392 aa; lipoprotein 105283..106440 Burkholderia pseudomallei K96243 3094376 YP_106720.1 CDS BPSL0094 NC_006350.1 106503 106658 D Poor database matches. Similar to Ralstonia solanacearum probable lipoprotein rsc2264 or rs01295 SWALL:Q8XX52 (EMBL:AL646069) (50 aa) fasta scores: E(): 1.6e-12, 74.51% id in 51 aa, and to the N-terminal region of Deinococcus radiodurans hypothetical protein DR1795 SWALL:Q9RTG9 (EMBL:AE002020) (264 aa) fasta scores: E(): 6.5, 40.38% id in 52 aa; lipoprotein 106503..106658 Burkholderia pseudomallei K96243 3093277 YP_106721.1 CDS BPSL0095 NC_006350.1 107005 107316 D Poor database matches. Similar to Mus musculus cryptdin-related protein 4C-2 precursor DEFCR-RS7 SWALL:DEFW_MOUSE (SWALL:P50715) (91 aa) fasta scores: E(): 0.73, 28.57% id in 84 aa; hypothetical protein 107005..107316 Burkholderia pseudomallei K96243 3093278 YP_106722.1 CDS speG NC_006350.1 107334 107894 D Similar to Escherichia coli spermidine n(1)-acetyltransferase SpeG SWALL:ATDA_ECOLI (SWALL:P37354) (185 aa) fasta scores: E(): 9e-46, 63.84% id in 177 aa, and to Listeria monocytogenes spermidine acetyltransferase SpeG SWALL:AAM48485 (EMBL:AF084042) (172 aa) fasta scores: E(): 6.2e-46, 68.9% id in 164 aa; spermidine n(1)-acetyltransferase 107334..107894 Burkholderia pseudomallei K96243 3094564 YP_106723.1 CDS BPSL0097 NC_006350.1 108383 108727 D hypothetical protein 108383..108727 Burkholderia pseudomallei K96243 3093576 YP_106724.1 CDS BPSL0098 NC_006350.1 108943 109497 D Similar to Ralstonia solanacearum hypothetical protein rsc0785 or rs05053 SWALL:Q8Y1A5 (EMBL:AL646061) (182 aa) fasta scores: E(): 4.7e-39, 57.77% id in 180 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc2289 SWALL:AAM41568 (EMBL:AE012336) (182 aa) fasta scores: E(): 2.1e-34, 55.21% id in 163 aa; hypothetical protein 108943..109497 Burkholderia pseudomallei K96243 3093577 YP_106725.1 CDS BPSL0099 NC_006350.1 109682 110098 R Similar to Pseudomonas aeruginosa probable ring-cleaving dioxygenase pa2546 SWALL:Q9I0T8 (EMBL:AE004682) (143 aa) fasta scores: E(): 1.8e-22, 53.03% id in 132 aa, and to the N-terminal region of Rhodococcus globerulus biphenyl-2,3-diol 1,2-dioxygenase II BphC2 SWALL:BHC2_RHOGO (SWALL:P47232) (189 aa) fasta scores: E(): 0.011, 29.85% id in 134 aa; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein complement(109682..110098) Burkholderia pseudomallei K96243 3092506 YP_106726.1 CDS BPSL0100 NC_006350.1 110500 111594 D Similar to Escherichia coli ada regulatory protein Ada SWALL:ADA_ECOLI (SWALL:P06134) (354 aa) fasta scores: E(): 3.3e-58, 48.71% id in 351 aa, and to Pseudomonas aeruginosa O6-methylguanine-DNA methyltransferase pa2118 SWALL:Q9I1Z7 (EMBL:AE004639) (358 aa) fasta scores: E(): 3.4e-57, 48.32% id in 358 aa; O6-methylguanine-DNA methyltransferase 110500..111594 Burkholderia pseudomallei K96243 3092507 YP_106727.1 CDS BPSL0101 NC_006350.1 111591 112532 D Similar to Escherichia coli DNA-3-methyladenine glycosylase II AlkA or AidA SWALL:3MG2_ECOLI (SWALL:P04395) (282 aa) fasta scores: E(): 1.3e-24, 37.24% id in 290 aa, and to Pseudomonas aeruginosa DNA-3-methyladenine glycosidase II pa1686 SWALL:Q9I339 (EMBL:AE004596) (297 aa) fasta scores: E(): 7.8e-43, 48.13% id in 295 aa; DNA-3-methyladenine glycosylase II 111591..112532 Burkholderia pseudomallei K96243 3094154 YP_106728.1 CDS BPSL0102 NC_006350.1 112703 114304 D involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 112703..114304 Burkholderia pseudomallei K96243 3094155 YP_106729.1 CDS BPSL0103 NC_006350.1 114323 115771 R Poor database matches. Similar to the C-terminal regions of Pseudomonas aeruginosa RNA polymerase sigma factor RpoD or RpoDA SWALL:RPSD_PSEAE (SWALL:P26480) (617 aa) fasta scores: E(): 4.3e-35, 33.48% id in 445 aa, and to Bordetella pertussis RNA polymerase sigma factor RpoD SWALL:P77833 (EMBL:U73858) (733 aa) fasta scores: E(): 3.7e-39, 39.14% id in 350 aa; RNA polymerase sigma factor complement(114323..115771) Burkholderia pseudomallei K96243 3093184 YP_106730.1 CDS BPSL0104 NC_006350.1 116034 116582 R hypothetical protein complement(116034..116582) Burkholderia pseudomallei K96243 3093185 YP_106731.1 CDS BPSL0105 NC_006350.1 116974 117090 D hypothetical protein 116974..117090 Burkholderia pseudomallei K96243 3094117 YP_106732.1 CDS BPSL0106 NC_006350.1 117179 117748 R hypothetical protein complement(117179..117748) Burkholderia pseudomallei K96243 3094118 YP_106733.1 CDS BPSL0107 NC_006350.1 117851 118819 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2447 SWALL:Q9I135 (EMBL:AE004672) (307 aa) fasta scores: E(): 3.8e-43, 44.14% id in 299 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 8.5e-36, 39.72% id in 287 aa; LysR family transcriptional regulator complement(117851..118819) Burkholderia pseudomallei K96243 3092142 YP_106734.1 CDS BPSL0108 NC_006350.1 118962 120056 D Similar to Escherichia coli putrescine-binding periplasmic protein precursor PotF SWALL:POTF_ECOLI (SWALL:P31133) (370 aa) fasta scores: E(): 3.7e-63, 47.23% id in 362 aa, and to Pseudomonas aeruginosa polyamine transport protein pa0301 SWALL:Q9I6J0 (EMBL:AE004468) (365 aa) fasta scores: E(): 1.4e-67, 50.14% id in 357 aa; extracellular solute-binding lipoprotein 118962..120056 Burkholderia pseudomallei K96243 3092143 YP_106735.1 CDS BPSL0109 NC_006350.1 120085 121197 D Similar to Pseudomonas aeruginosa probable acetylpolyamine aminohydrolase pa3774 SWALL:Q9HXM1 (EMBL:AE004796) (380 aa) fasta scores: E(): 5.1e-47, 41.71% id in 374 aa, and to an internal region of Homo sapiens histone deacetylase 6 HDAC6 SWALL:HDA6_HUMAN (SWALL:Q9UBN7) (1215 aa) fasta scores: E(): 3.1e-33, 37.6% id in 367 aa; histone deacetylase 120085..121197 Burkholderia pseudomallei K96243 3092519 YP_106736.1 CDS BPSL0110 NC_006350.1 121208 122083 D Similar to Pseudomonas aeruginosa probable hydratase pa0293 SWALL:Q9I6J8 (EMBL:AE004467) (292 aa) fasta scores: E(): 2.1e-77, 65.48% id in 281 aa, and to the C-terminal region of Homo sapiens beta-ureidopropionase BUP1 SWALL:BUP1_HUMAN (SWALL:Q9UBR1) (384 aa) fasta scores: E(): 3e-14, 29.61% id in 287 aa; carbon-nitrogen hydrolase 121208..122083 Burkholderia pseudomallei K96243 3092520 YP_106737.1 CDS BPSL0111 NC_006350.1 123313 124425 D Similar to bacteriophage HP1 probable portal protein SWALL:VPQ_BPHP1 (SWALL:P51717) (345 aa) fasta scores: E(): 1.4e-33, 34.16% id in 319 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1941 or rs03510 SWALL:Q8XY22 (EMBL:AL646067) (361 aa) fasta scores: E(): 3.4e-91, 62.42% id in 354 aa. C-terminal region is similar to BPSL0173, 99.390% identity (99.390% ungapped) in 328 aa overlap and to BPSS1062, 99.085% identity (99.085% ungapped) in 328 aa overlap; portal protein 123313..124425 Burkholderia pseudomallei K96243 3094170 YP_106738.1 CDS BPSL0112 NC_006350.1 124499 124783 R hypothetical protein complement(124499..124783) Burkholderia pseudomallei K96243 3092174 YP_106739.1 CDS BPSL0113 NC_006350.1 124780 125262 R Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc2888 or rs00212 SWALL:Q8XVE3 (EMBL:AL646072) (152 aa) fasta scores: E(): 1.1e-20, 44.58% id in 157 aa. C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc2388 or rs02761 SWALL:Q8XWT2 (EMBL:AL646069) (84 aa) fasta scores: E(): 2.7e-11, 48.14% id in 81 aa. C-terminal region is similar to BPSL1373, 55.224% identity (55.224% ungapped) in 134 aa overlap; hypothetical protein complement(124780..125262) Burkholderia pseudomallei K96243 3092175 YP_106740.1 CDS BPSL0113A NC_006350.1 125800 126804 R hypothetical protein complement(125800..126804) Burkholderia pseudomallei K96243 3091908 YP_106741.1 CDS BPSL0114 NC_006350.1 127678 128082 D Similar to Pseudomonas aeruginosa hypothetical protein pa0957 SWALL:Q9I501 (EMBL:AE004529) (135 aa) fasta scores: E(): 1.3e-08, 31.34% id in 134 aa, and to Brucella melitensis hypothetical cytosolic protein bmei0304 SWALL:Q8YIY5 (EMBL:AE009472) (135 aa) fasta scores: E(): 2.1e-08, 33.85% id in 127 aa; hypothetical protein 127678..128082 Burkholderia pseudomallei K96243 3091909 YP_106742.1 CDS BPSL0115 NC_006350.1 128120 128989 D Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0013 or rs01835 SWALL:Q8Y3G7 (EMBL:AL646057) (297 aa) fasta scores: E(): 1.2e-82, 70.77% id in 284 aa, and to the C-terminal region of Caulobacter crescentus hypothetical protein CC3383 SWALL:Q9A323 (EMBL:AE005999) (353 aa) fasta scores: E(): 0.6, 24.21% id in 256 aa; patatin-like phospholipase 128120..128989 Burkholderia pseudomallei K96243 3092422 YP_106743.1 CDS BPSL0116 NC_006350.1 129110 130126 R Similar to Escherichia coli 2-ketogluconate reductase TkrA SWALL:TKRA_ECOLI (SWALL:P37666) (324 aa) fasta scores: E(): 8.3e-17, 28% id in 325 aa, and to Ralstonia solanacearum D-3-phosphoglycerate dehydrogenase oxidoreductase rsc0016 or rs01838 SWALL:Q8Y3G4 (EMBL:AL646057) (353 aa) fasta scores: E(): 8.8e-100, 72.72% id in 341 aa; D-isomer specific 2-hydroxyacid dehydrogenase complement(129110..130126) Burkholderia pseudomallei K96243 3092423 YP_106744.1 CDS BPSL0117 NC_006350.1 130565 131620 D No significant database matches to the full length CDS. CDS is extended at the C-terminus in comparison to orthologues. Similar to Xanthomonas campestris pv. campestris str. ATCC 33913 transcriptional regulator xcc3667 SWALL:AAM42937 (EMBL:AE012487) (311 aa) fasta scores: E(): 3.1e-45, 50% id in 292 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0065 or rs02244 SWALL:Q8Y3B5 (EMBL:AL646057) (312 aa) fasta scores: E(): 3e-47, 47.44% id in 293 aa; LysR family transcriptional regulator 130565..131620 Burkholderia pseudomallei K96243 3092350 YP_106745.1 CDS BPSL0118 NC_006350.1 131843 134452 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(131843..134452) Burkholderia pseudomallei K96243 3092351 YP_106746.1 CDS BPSL0119 NC_006350.1 134663 135034 R Similar to Emericella nidulans thioredoxin SWALL:THIO_EMENI (SWALL:P29429) (109 aa) fasta scores: E(): 0.0055, 31.25% id in 80 aa, and to Ralstonia solanacearum thioredoxin-like protein rsc0067 or rs02246 SWALL:Q8Y3B3 (EMBL:AL646057) (129 aa) fasta scores: E(): 2.2e-24, 57.72% id in 123 aa; thioredoxin complement(134663..135034) Burkholderia pseudomallei K96243 3093728 YP_106747.1 CDS BPSL0120 NC_006350.1 135094 136284 R C-terminus is similar to the C-terminal region of Haemophilus influenzae DNA processing chain A protein Smf or DprA SWALL:SMF_HAEIN (SWALL:P43862) (373 aa) fasta scores: E(): 2.1e-30, 41.92% id in 322 aa. Full length CDS is similar to the C-terminal region of Ralstonia solanacearum probable Smf protein rsc0068 or rs02247 SWALL:Q8Y3B2 (EMBL:AL646057) (401 aa) fasta scores: E(): 8.4e-58, 53.33% id in 360 aa. Possible alternative translational start site after codon 21; SMF family protein complement(135094..136284) Burkholderia pseudomallei K96243 3093729 YP_106748.1 CDS def NC_006350.1 136513 137016 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 136513..137016 Burkholderia pseudomallei K96243 3093438 YP_106749.1 CDS fmt NC_006350.1 137048 138031 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 137048..138031 Burkholderia pseudomallei K96243 3094560 YP_106750.1 CDS BPSL0123 NC_006350.1 138152 138787 D Similar to Ralstonia solanacearum probable transporter transmembrane protein rsc0073 or rs02251 SWALL:Q8Y3A7 (EMBL:AL646057) (215 aa) fasta scores: E(): 1.1e-55, 68.69% id in 214 aa, and to Ralstonia solanacearum probable transport transmembrane protein rsc0418 or rs03386 SWALL:Q8Y2B8 (EMBL:AL646059) (206 aa) fasta scores: E(): 5.9e-26, 40.29% id in 201 aa; LysE type translocator protein 138152..138787 Burkholderia pseudomallei K96243 3093926 YP_106751.1 CDS BPSL0124 NC_006350.1 138897 139754 D Similar to Streptococcus gordonii Challis probable protease HtpX homolog SWALL:HTPX_STRGC (SWALL:O30795) (297 aa) fasta scores: E(): 3.2e-25, 39.79% id in 294 aa, and to Ralstonia solanacearum probable metalloprotease zinc transmembrane protein rsc0074 or rs02252 SWALL:Q8Y3A6 (EMBL:AL646057) (286 aa) fasta scores: E(): 4.1e-92, 86.97% id in 284 aa; M48 family peptidase 138897..139754 Burkholderia pseudomallei K96243 3093927 YP_106752.1 CDS sun NC_006350.1 140228 141637 D C-terminal region is similar to Escherichia coli sun protein Sun or Fmu or Fmv or RsmB SWALL:SUN_ECOLI (SWALL:P36929) (429 aa) fasta scores: E(): 3.6e-46, 37.86% id in 441 aa, and to Ralstonia solanacearum RNA methyltransferase rsc0075 or rs02273 SWALL:Q8Y3A5 (EMBL:AL646057) (441 aa) fasta scores: E(): 1.4e-89, 59.11% id in 450 aa. CDS appear to be extended at the N-terminus in comparison to orthologues; NOL1/NOP2/Sun family protein 140228..141637 Burkholderia pseudomallei K96243 3092372 YP_106753.1 CDS BPSL0126 NC_006350.1 141634 142224 D Similar to Neisseria meningitidis hypothetical protein nma0161 SWALL:Q9JWZ1 (EMBL:AL162752) (199 aa) fasta scores: E(): 1.2e-17, 36.87% id in 179 aa, and to the N-terminal region of Ralstonia solanacearum probable proline rich signal peptide protein rsc0076 or rs02253 SWALL:Q8Y3A4 (EMBL:AL646057) (256 aa) fasta scores: E(): 3.4e-38, 56.14% id in 171 aa; hypothetical protein 141634..142224 Burkholderia pseudomallei K96243 3093321 YP_106754.1 CDS BPSL0127 NC_006350.1 142226 144634 D Two-component regulatory system family, sensor kinase. Similar to Azorhizobium caulinodans nitrogen regulation protein NtrY SWALL:NTRY_AZOCA (SWALL:Q04850) (771 aa) fasta scores: E(): 2.7e-25, 26.65% id in 814 aa, and to Ralstonia solanacearum probable two component sensor histidine kinase transcription regulator protein rsc0077 or rs02275 SWALL:Q8Y3A3 (EMBL:AL646057) (811 aa) fasta scores: E(): 6.7e-118, 58.61% id in 824 aa; sensor kinase 142226..144634 Burkholderia pseudomallei K96243 3093322 YP_106755.1 CDS BPSL0128 NC_006350.1 144635 145318 D Two-component regulatory system family, response regulator protein. Similar to Bradyrhizobium japonicum transcriptional regulatory protein FixJ SWALL:FIXJ_BRAJA (SWALL:P23221) (205 aa) fasta scores: E(): 1.1e-09, 31.15% id in 199 aa, and to Ralstonia solanacearum probable two component response regulator transcription regulator protein rsc0078 or rs02276 SWALL:Q8Y3A2 (EMBL:AL646057) (239 aa) fasta scores: E(): 5.9e-33, 72.19% id in 241 aa; response regulator protein 144635..145318 Burkholderia pseudomallei K96243 3093384 YP_106756.1 CDS int NC_006350.1 145390 146520 R Similar to the N-terminal regions of Escherichia coli prophage dlp12 integrase IntD or Int SWALL:INTD_ECOLI (SWALL:P24218) (387 aa) fasta scores: E(): 5.1e-19, 36.06% id in 366 aa, and Bacteriophage Sfx integrase Int SWALL:Q9ZXG4 (EMBL:U82084) (386 aa) fasta scores: E(): 4.7e-21, 38.21% id in 369 aa. Note - terminates within tRNA gene that is attachment site for phage; prophage integrase complement(145390..146520) Burkholderia pseudomallei K96243 3093478 YP_106757.1 CDS BPSL0130 NC_006350.1 147388 150180 R Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0967 or rs04399 SWALL:Q8Y0S6 (EMBL:AL646062) (933 aa) fasta scores: E(): 6.5e-153, 50.53% id in 930 aa. N-terminus is similar to the N-termial region of Anabaena sp. DNA primase ALL323 SWALL:Q8YX92 (EMBL:AP003585) (640 aa) fasta scores: E(): 0.21, 23.27% id in 391 aa; hypothetical protein complement(147388..150180) Burkholderia pseudomallei K96243 3093385 YP_106758.1 CDS BPSL0130a NC_006350.1 150192 150446 R hypothetical protein complement(150192..150446) Burkholderia pseudomallei K96243 3094417 YP_106759.1 CDS BPSL0131 NC_006350.1 150443 150811 R hypothetical protein complement(150443..150811) Burkholderia pseudomallei K96243 3094418 YP_106760.1 CDS BPSL0132 NC_006350.1 150805 151011 R hypothetical protein complement(150805..151011) Burkholderia pseudomallei K96243 3093807 YP_106761.1 CDS BPSL0133 NC_006350.1 151180 151419 R hypothetical protein complement(151180..151419) Burkholderia pseudomallei K96243 3093808 YP_106762.1 CDS BPSL0134 NC_006350.1 151423 151632 R phage-encoded membrane protein complement(151423..151632) Burkholderia pseudomallei K96243 3093600 YP_106763.1 CDS BPSL0135 NC_006350.1 151661 151858 R Similar to Ralstonia solanacearum hypothetical protein rsc1899 or rs03466 SWALL:Q8XY64 (EMBL:AL646067) (68 aa) fasta scores: E(): 2.2, 28.78% id in 66 aa; hypothetical protein complement(151661..151858) Burkholderia pseudomallei K96243 3093601 YP_106764.1 CDS BPSL0136 NC_006350.1 151864 152082 R hypothetical protein complement(151864..152082) Burkholderia pseudomallei K96243 3093950 YP_106765.1 CDS BPSL0137 NC_006350.1 152098 152643 R No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of bacteriophage APSE-1 hypothetical protein P43 SWALL:Q9T1Q5 (EMBL:AF157835) (256 aa) fasta scores: E(): 3.6e-10, 35.33% id in 133 aa, and to Yersinia pestis phage protein YPO2093 SWALL:Q8ZER2 (EMBL:AJ414151) (187 aa) fasta scores: E(): 1.1e-13, 42.42% id in 132 aa; hypothetical protein complement(152098..152643) Burkholderia pseudomallei K96243 3093951 YP_106766.1 CDS BPSL0138 NC_006350.1 152729 152977 R Similar to bacteriophage K139 hypothetical proteinOrf13 SWALL:Q8W755 (EMBL:AF125163) (83 aa) fasta scores: E(): 1.9e-07, 35.71% id in 84 aa, and to Ralstonia solanacearum bacteriophage transcriptional activator-related transcription regulator protein rsc0964 or rs04403 SWALL:Q8Y0S9 (EMBL:AL646062) (73 aa) fasta scores: E(): 7.6e-08, 47.36% id in 76 aa; hypothetical protein complement(152729..152977) Burkholderia pseudomallei K96243 3091758 YP_106767.1 CDS BPSL0139 NC_006350.1 152965 153261 R Poor database matches. Similar to an internal region of Salmonella typhimurium and Salmonella typhi hypothetical protein STM2627 or STM1013 or STY1021 SWALL:O84891 (EMBL:AF001386) (124 aa) fasta scores: E(): 5.3, 31.76% id in 85 aa; phage DNA-binding protein complement(152965..153261) Burkholderia pseudomallei K96243 3091759 YP_106768.1 CDS BPSL0140 NC_006350.1 153265 153459 R Poor database matches. Similar to Methanobacterium thermoautotrophicum hypothetical protein MTH467 SWALL:O26567 (EMBL:AE000831) (53 aa) fasta scores: E(): 6.3, 41.17% id in 51 aa; hypothetical protein complement(153265..153459) Burkholderia pseudomallei K96243 3093701 YP_106769.1 CDS BPSL0141 NC_006350.1 153540 154043 D Similar to Ralstonia solanacearum DNA-binding repressor transcription regulator protein rsc1907 or rs03481 SWALL:Q8XY56 (EMBL:AL646067) (173 aa) fasta scores: E(): 2.2e-19, 43.45% id in 168 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related protein Z2969 SWALL:AAM42269 (EMBL:AE012413) (142 aa) fasta scores: E(): 3.2e-11, 43.13% id in 153 aa; phage DNA-binding protein 153540..154043 Burkholderia pseudomallei K96243 3093702 YP_106770.1 CDS BPSL0142 NC_006350.1 154096 154845 D Poor database matches. C-terminus is similar to the N-terminal region of Neisseria meningitidis phage transposase NMA1284 SWALL:Q9JUJ5 (EMBL:AL162755) (657 aa) fasta scores: E(): 1, 25.98% id in 177 aa; phage-encoded membrane protein 154096..154845 Burkholderia pseudomallei K96243 3094095 YP_106771.1 CDS BPSL0143 NC_006350.1 154888 155388 D hypothetical protein 154888..155388 Burkholderia pseudomallei K96243 3094096 YP_106772.1 CDS BPSL0144 NC_006350.1 155396 156493 R Similar to bacteriophage 186 late control gene D protein SWALL:VPD_BP186 (SWALL:P21679) (389 aa) fasta scores: E(): 4.9e-35, 41.59% id in 363 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein D SWALL:AAM42266 (EMBL:AE012413) (328 aa) fasta scores: E(): 8e-63, 49.69% id in 328 aa. Similar to BPSS1089, 97.253% identity (97.253% ungapped) in 364 aa overlap; hypothetical protein complement(155396..156493) Burkholderia pseudomallei K96243 3091931 YP_106773.1 CDS BPSL0145 NC_006350.1 156493 156918 R Similar to bacteriophage phi CTX Orf26 protein SWALL:Q9ZXJ9 (EMBL:AB008550) (146 aa) fasta scores: E(): 2.6e-21, 51.2% id in 125 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein U SWALL:AAM42265 (EMBL:AE012413) (133 aa) fasta scores: E(): 3.7e-21, 53.6% id in 125 aa. Similar to BPSS1088, 98.582% identity (98.582% ungapped) in 141 aa overlap; hypothetical protein complement(156493..156918) Burkholderia pseudomallei K96243 3091932 YP_106774.1 CDS BPSL0146 NC_006350.1 156936 159902 R Similar to bacteriophage phi CTX Orf25 protein SWALL:Q9ZXK0 (EMBL:AB008550) (904 aa) fasta scores: E(): 2.4e-15, 27.65% id in 1045 aa, and to Ralstonia solanacearum probable phage-related tail transmembrane protein rsc1914 or rs03483 SWALL:Q8XY49 (EMBL:AL646067) (887 aa) fasta scores: E(): 1.5e-86, 39.43% id in 989 aa. Similar to BPSS1087, 84.514% identity (84.514% ungapped) in 988 aa overlap; phage-encoded membrane protein complement(156936..159902) Burkholderia pseudomallei K96243 3093721 YP_106775.1 CDS BPSL0147 NC_006350.1 159899 160012 R Similar to bacteriophage phi CTX Orf24.5 protein SWALL:Q9ZXK1 (EMBL:AB008550) (39 aa) fasta scores: E(): 1.9e-07, 56.75% id in 37 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related protein orf52 SWALL:AAM42263 (EMBL:AE012413) (37 aa) fasta scores: E(): 4.4e-08, 62.16% id in 37 aa; hypothetical protein complement(159899..160012) Burkholderia pseudomallei K96243 3093722 YP_106776.1 CDS BPSL0148 NC_006350.1 160021 160365 R Similar to bacteriophage phi CTX Orf24 protein SWALL:Q9ZXK2 (EMBL:AB008550) (108 aa) fasta scores: E(): 6.9e-14, 54.83% id in 93 aa, and to Ralstonia solanacearum probable phage-related protein rsc1916 or rs03484 SWALL:Q8XY47 (EMBL:AL646067) (118 aa) fasta scores: E(): 4.6e-13, 55.31% id in 94 aa. Identical to BPSS1086, 100.000% identity (100.000% ungapped) in 114 aa overlap; hypothetical protein complement(160021..160365) Burkholderia pseudomallei K96243 3092322 YP_106777.1 CDS BPSL0149 NC_006350.1 160423 160932 R Similar to bacteriophage P2 major tail tube protein FII SWALL:VPF2_BPP2 (SWALL:P22502) (171 aa) fasta scores: E(): 1.8e-26, 44.7% id in 170 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein FII SWALL:AAM42261 (EMBL:AE012413) (169 aa) fasta scores: E(): 8.2e-37, 54.16% id in 168 aa. Similar to BPSS1085, 99.408% identity (99.408% ungapped) in 169 aa overlap; phage major tail tube protein complement(160423..160932) Burkholderia pseudomallei K96243 3092323 YP_106778.1 CDS BPSL0150 NC_006350.1 160948 162120 R Similar to bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 2.1e-90, 61.63% id in 391 aa, and to Ralstonia solanacearum probable phage-related protein rsc1918 or rs03487 SWALL:Q8XY45 (EMBL:AL646067) (391 aa) fasta scores: E(): 3.1e-100, 67.26% id in 388 aa. Identical to BPSS1084, 100.000% identity (100.000% ungapped) in 390 aa overlap; phage major tail sheath protein complement(160948..162120) Burkholderia pseudomallei K96243 3093626 YP_106779.1 CDS BPSL0151 NC_006350.1 162176 162847 R N-terminus is similar to bacteriophage lambda tail fiber assembly protein Tfa SWALL:TFA_LAMBD (SWALL:P03740) (194 aa) fasta scores: E(): 0.011, 27.89% id in 190 aa, and to the N-terminal region of Ralstonia solanacearum tail fiber assembly-like protein rsc1920 or rs03489 SWALL:Q8XY43 (EMBL:AL646067) (250 aa) fasta scores: E(): 3.5e-09, 41.73% id in 115 aa. Similar to BPSS1083, 97.758% identity (97.758% ungapped) in 223 aa overlap; phage tail fiber assembly protein complement(162176..162847) Burkholderia pseudomallei K96243 3093627 YP_106780.1 CDS BPSL0152 NC_006350.1 162864 165236 R No significant database matches to the full length CDS. N-terminal region is similar to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail fiber protein Orf8 SWALL:AAM42256 (EMBL:AE012412) (401 aa) fasta scores: E(): 9e-20, 31.07% id in 399 aa. C-terminus is similar to the C-terminal region of Escherichia coli side tail fiber protein homolog from lambdoid prophage RAC StfR SWALL:STFR_ECOLI (SWALL:P76072) (1120 aa) fasta scores: E(): 0.02, 25.6% id in 578 aa. Similar to BPSS1082, 98.348% identity (98.348% ungapped) in 787 aa overlap; phage-related tail fiber protein complement(162864..165236) Burkholderia pseudomallei K96243 3092297 YP_106781.1 CDS BPSL0153 NC_006350.1 165238 165792 R Similar to bacteriophage phi CTX Orf19 protein SWALL:Q9ZXK7 (EMBL:AB008550) (178 aa) fasta scores: E(): 4.7e-15, 37.83% id in 148 aa, and to Xanthomonas axonopodis pv. citri str. 306 phage-related tail protein I SWALL:AAM37503 (EMBL:AE011905) (180 aa) fasta scores: E(): 3.5e-30, 50.29% id in 171 aa. Similar to BPSS1081, 99.457% identity (99.457% ungapped) in 184 aa overlap; hypothetical protein complement(165238..165792) Burkholderia pseudomallei K96243 3092298 YP_106782.1 CDS BPSL0154 NC_006350.1 165785 166690 R Similar to bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 2.4e-45, 45.6% id in 296 aa, and to Salmonella typhi phage baseplate assembly protein STY3689 SWALL:Q8Z344 (EMBL:AL627279) (302 aa) fasta scores: E(): 2.3e-48, 49.66% id in 296 aa. Similar to BPSS1080, 95.017% identity (95.017% ungapped) in 301 aa overlap; phage baseplate assembly protein complement(165785..166690) Burkholderia pseudomallei K96243 3093444 YP_106783.1 CDS BPSL0155 NC_006350.1 166687 167049 R Similar to bacteriophage P2 baseplate assembly protein W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 9.9e-12, 36.28% id in 113 aa, and to bacteriophage phi CTX Orf17 protein SWALL:Q9ZXK9 (EMBL:AB008550) (114 aa) fasta scores: E(): 1.1e-15, 43.59% id in 117 aa. Similar to BPSS1079, 99.167% identity (99.167% ungapped) in 120 aa overlap; phage baseplate assembly protein complement(166687..167049) Burkholderia pseudomallei K96243 3093445 YP_106784.1 CDS BPSL0156 NC_006350.1 167046 167726 R Similar to bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 4.3e-14, 34.93% id in 229 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related baseplate protein V SWALL:AAM42258 (EMBL:AE012413) (187 aa) fasta scores: E(): 2.8e-16, 36.46% id in 181 aa. Similar to BPSS1078, 96.903% identity (96.903% ungapped) in 226 aa overlap; phage baseplate assembly protein complement(167046..167726) Burkholderia pseudomallei K96243 3093916 YP_106785.1 CDS BPSL0157 NC_006350.1 167900 168658 D Similar to Brucella abortus modification methylase CcrM SWALL:MTB1_BRUAB (SWALL:O30570) (377 aa) fasta scores: E(): 4.1e-06, 31.66% id in 259 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 site-specific DNA-methyltransferase xcc2967 SWALL:AAM42239 (EMBL:AE012411) (234 aa) fasta scores: E(): 1.3e-37, 47.21% id in 233 aa. Similar to BPSS1077, 95.926% identity (95.926% ungapped) in 270 aa overlap; phage-encoded modification methylase 167900..168658 Burkholderia pseudomallei K96243 3093917 YP_106786.1 CDS BPSL0158 NC_006350.1 168655 168801 R hypothetical protein complement(168655..168801) Burkholderia pseudomallei K96243 3092546 YP_106787.1 CDS BPSL0159 NC_006350.1 169058 169525 R Similar to bacteriophage P2 tail completion protein S SWALL:VPS_BPP2 (SWALL:P36934) (150 aa) fasta scores: E(): 9.2e-13, 36.84% id in 152 aa, and to Xanthomonas axonopodis pv. citri str. 306 phage-related tail protein S SWALL:AAM37500 (EMBL:AE011905) (148 aa) fasta scores: E(): 4e-25, 50.99% id in 151 aa. Similar to BPSS1075, 94.194% identity (94.194% ungapped) in 155 aa overlap; phage tail completion protein complement(169058..169525) Burkholderia pseudomallei K96243 3092547 YP_106788.1 CDS BPSL0160 NC_006350.1 169522 169938 R Similar to bacteriophage P2 tail completion protein R SWALL:VPR_BPP2 (SWALL:P36933) (155 aa) fasta scores: E(): 9.4e-13, 37.87% id in 132 aa, and to Ralstonia solanacearum probable tail completion-like protein rsc1929 or rs03499 SWALL:Q8XY34 (EMBL:AL646067) (144 aa) fasta scores: E(): 2.2e-19, 44.92% id in 138 aa. Similar to BPSS1074, 97.101% identity (97.101% ungapped) in 138 aa overlap; phage tail completion protein complement(169522..169938) Burkholderia pseudomallei K96243 3092102 YP_106789.1 CDS BPSL0161 NC_006350.1 169931 170206 R Similar to bacteriophage phi CTX Orf12.5 protein SWALL:Q9ZXL4 (EMBL:AB008550) (89 aa) fasta scores: E(): 9.3e-09, 41.97% id in 81 aa, and to Salmonella typhimurium Fels-2 prophage: similar to protein from phage CTX STM2713 SWALL:Q8ZMT9 (EMBL:AE008823) (94 aa) fasta scores: E(): 6.2e-09, 43.59% id in 78 aa. Possible alternative translational start site; hypothetical protein complement(169931..170206) Burkholderia pseudomallei K96243 3092103 YP_106790.1 CDS BPSL0162 NC_006350.1 170043 170483 R Similar to bacteriophage P2 LysB protein SWALL:LYSB_BPP2 (SWALL:P51770) (141 aa) fasta scores: E(): 0.00013, 35.41% id in 144 aa, and to bacteriophage phi CTX Orf12 protein SWALL:Q9ZXL5 (EMBL:AB008550) (153 aa) fasta scores: E(): 0.0051, 31.65% id in 139 aa. Similar to BPSS1073, 98.571% identity (98.571% ungapped) in 140 aa overlap; phage-encoded lipoprotein complement(170043..170483) Burkholderia pseudomallei K96243 3094467 YP_106791.1 CDS BPSL0163 NC_006350.1 170480 171292 R Similar to bacteriophage phi CTX Orf11 protein SWALL:Q9ZXL6 (EMBL:AB008550) (268 aa) fasta scores: E(): 2.2e-45, 51.3% id in 269 aa, and to Ralstonia solanacearum phage-related protein rsc1931 or rs03500 SWALL:Q8XY32 (EMBL:AL646067) (268 aa) fasta scores: E(): 3.3e-50, 56.77% id in 273 aa. Similar to BPSS1072, 98.148% identity (98.148% ungapped) in 270 aa overlap; phage-encoded peptidoglycan binding protein complement(170480..171292) Burkholderia pseudomallei K96243 3094468 YP_106792.1 CDS BPSL0164 NC_006350.1 171289 171561 R Similar to bacteriophage phi CTX Orf10 protein SWALL:Q9ZXL7 (EMBL:AB008550) (90 aa) fasta scores: E(): 2.9e-06, 37.5% id in 80 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related protein Orf90 SWALL:AAM42249 (EMBL:AE012412) (91 aa) fasta scores: E(): 4.7e-10, 41.75% id in 91 aa. Identical to BPSS1071, 100.000% identity (100.000% ungapped) in 90 aa overlap; phage-encoded membrane protein complement(171289..171561) Burkholderia pseudomallei K96243 3093235 YP_106793.1 CDS BPSL0165 NC_006350.1 171563 171907 R Similar to bacteriophage phi CTX protein SWALL:Q9ZXL8 (EMBL:AB008550) (117 aa) fasta scores: E(): 0.00085, 31.85% id in 113 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related protein Orf89 SWALL:AAM42248 (EMBL:AE012412) (118 aa) fasta scores: E(): 1.6e-15, 51.75% id in 114 aa. Identical to BPSS1070, 100.000% identity (100.000% ungapped) in 114 aa overlap; phage-encoded membrane protein complement(171563..171907) Burkholderia pseudomallei K96243 3093236 YP_106794.1 CDS BPSL0166 NC_006350.1 171922 172128 R Similar to bacteriophage P2 tail protein X SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 2.4e-11, 69.81% id in 53 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein X SWALL:AAM42247 (EMBL:AE012412) (69 aa) fasta scores: E(): 3.6e-13, 59.42% id in 69 aa. Identical to BPSS1069, 100.000% identity (100.000% ungapped) in 68 aa overlap; phage tail protein complement(171922..172128) Burkholderia pseudomallei K96243 3092738 YP_106795.1 CDS BPSL0167 NC_006350.1 172125 172376 R No significant database matches. Similar to BPSS1068, 97.590% identity (97.590% ungapped) in 83 aa overlap; hypothetical protein complement(172125..172376) Burkholderia pseudomallei K96243 3092739 YP_106796.1 CDS BPSL0168 NC_006350.1 172376 172855 R Similar to bacteriophage P2 head completion/stabilization protein L SWALL:VPL_BPP2 (SWALL:P25475) (169 aa) fasta scores: E(): 2.8e-15, 42.25% id in 142 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1935 or rs03504 SWALL:Q8XY28 (EMBL:AL646067) (159 aa) fasta scores: E(): 2.8e-26, 55.34% id in 159 aa. Similar to BPSS1067, 98.113% identity (98.113% ungapped) in 159 aa overlap; phage head completion/stabilization protein complement(172376..172855) Burkholderia pseudomallei K96243 3093621 YP_106797.1 CDS BPSL0169 NC_006350.1 172955 173644 R Similar to bacteriophage P2 terminase, endonuclease subunit M SWALL:VPM_BPP2 (SWALL:P25476) (247 aa) fasta scores: E(): 2.7e-27, 46.29% id in 216 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1936 or rs03505 SWALL:Q8XY27 (EMBL:AL646067) (240 aa) fasta scores: E(): 8.6e-30, 48.73% id in 238 aa. Similar to BPSS1066, 99.561% identity (99.561% ungapped) in 228 aa overlap; phage terminase, endonuclease subunit complement(172955..173644) Burkholderia pseudomallei K96243 3093622 YP_106798.1 CDS BPSL0170 NC_006350.1 173641 174651 R Similar to bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 5.7e-70, 55.84% id in 342 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM3 (EMBL:AB008550) (338 aa) fasta scores: E(): 1.6e-83, 64.39% id in 337 aa. Similar to BPSS1065, 97.626% identity (97.917% ungapped) in 337 aa overlap; phage major capsid protein complement(173641..174651) Burkholderia pseudomallei K96243 3092723 YP_106799.1 CDS BPSL0171 NC_006350.1 174685 175494 R Similar to bacteriophage P2 presumed capsid scaffolding protein O SWALL:VPO_BPP2 (SWALL:P25478) (284 aa) fasta scores: E(): 3e-24, 43.44% id in 290 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM4 (EMBL:AB008550) (273 aa) fasta scores: E(): 9e-31, 44.71% id in 284 aa. Similar to BPSS1064, 98.885% identity (98.885% ungapped) in 269 aa overlap; phage capsid scaffolding protein complement(174685..175494) Burkholderia pseudomallei K96243 3092724 YP_106800.1 CDS BPSL0172 NC_006350.1 175638 177407 D Similar to bacteriophage P2 terminase, ATPase subunit P SWALL:VPP_BPP2 (SWALL:P25479) (590 aa) fasta scores: E(): 4.2e-136, 56.15% id in 593 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM5 (EMBL:AB008550) (594 aa) fasta scores: E(): 5.3e-160, 67.19% id in 564 aa. Simlar to BPSS1063, 98.980% identity (98.980% ungapped) in 588 aa overlap; phage terminase, ATPase subunit 175638..177407 Burkholderia pseudomallei K96243 3092332 YP_106801.1 CDS BPSL0173 NC_006350.1 177404 178459 D Similar to bacteriophage P2 presumed portal vertex protein Q SWALL:VPQ_BPP2 (SWALL:P25480) (344 aa) fasta scores: E(): 5.5e-78, 54.65% id in 344 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1941 or rs03510 SWALL:Q8XY22 (EMBL:AL646067) (361 aa) fasta scores: E(): 1.1e-90, 61.69% id in 355 aa. Similar to BPSS1062, 99.430% identity (99.430% ungapped) in 351 aa overlap and to the C-terminal region of BPSL0111, 99.390% identity (99.390% ungapped) in 328 aa overlap; phage portal vertex protein 177404..178459 Burkholderia pseudomallei K96243 3092333 YP_106802.1 CDS BPSL0174 NC_006350.1 178503 178859 R Similar to Ralstonia solanacearum hypothetical protein rsp0076 or rs05545 SWALL:Q8XTN0 (EMBL:AL646076) (99 aa) fasta scores: E(): 5.5e-10, 50% id in 88 aa, and to Xylella fastidiosa hypothetical protein XF2763 SWALL:Q9P9V8 (EMBL:AE004082) (102 aa) fasta scores: E(): 3e-11, 44.68% id in 94 aa. CDS is extended at the C-terminus in comparison to orthologues. Similar to BPSS1061, 99.153% identity (99.153% ungapped) in 118 aa overlap; phage DNA-binding protein complement(178503..178859) Burkholderia pseudomallei K96243 3094173 YP_106803.1 CDS BPSL0175 NC_006350.1 178862 179185 R Similar to Xylella fastidiosa hypothetical protein XF1703 SWALL:Q9PCS5 (EMBL:AE003994) (102 aa) fasta scores: E(): 2e-15, 45.91% id in 98 aa, and to Haemophilus influenzae hypothetical protein HI1419 SWALL:YE19_HAEIN (SWALL:P44190) (99 aa) fasta scores: E(): 3.7e-14, 48.93% id in 94 aa. Simlar to BPSS1060, 95.690% identity (95.690% ungapped) in 116 aa overlap; hypothetical protein complement(178862..179185) Burkholderia pseudomallei K96243 3094174 YP_106804.1 CDS BPSL0176 NC_006350.1 179988 180728 R phage-encoded membrane protein complement(179988..180728) Burkholderia pseudomallei K96243 3093809 YP_106805.1 CDS BPSL0177 NC_006350.1 182072 182806 D Similar to Caulobacter crescentus ExsB protein CC3160 SWALL:Q9A3P2 (EMBL:AE005980) (242 aa) fasta scores: E(): 4.4e-62, 63.39% id in 224 aa, and to Rhizobium loti hypothetical protein MLL5936 SWALL:Q98AM3 (EMBL:AP003007) (245 aa) fasta scores: E(): 4.8e-57, 58.97% id in 234 aa; hypothetical protein 182072..182806 Burkholderia pseudomallei K96243 3093810 YP_106806.1 CDS BPSL0178 NC_006350.1 182900 183532 D Similar to Ralstonia solanacearum hypothetical protein rsc1449 or rs03858 SWALL:Q8XZF2 (EMBL:AL646064) (212 aa) fasta scores: E(): 1.4e-57, 67.29% id in 211 aa, and to Caulobacter crescentus hypothetical protein CC3159 SWALL:Q9A3P3 (EMBL:AE005980) (210 aa) fasta scores: E(): 1.8e-55, 64.28% id in 210 aa; hypothetical protein 182900..183532 Burkholderia pseudomallei K96243 3093742 YP_106807.1 CDS BPSL0179 NC_006350.1 183552 184004 D Similar to Ralstonia solanacearum 6-pyruvoyl tetrahydrobiopterin synthase rsc1450 or rs03857 SWALL:Q8XZF1 (EMBL:AL646064) (158 aa) fasta scores: E(): 1.1e-34, 65.27% id in 144 aa, and to Neisseria meningitidis hypothetical protein NMA0704 SWALL:Q9JVT6 (EMBL:AL162754) (140 aa) fasta scores: E(): 3e-13, 39.18% id in 148 aa; 6-pyruvoyl tetrahydrobiopterin synthase 183552..184004 Burkholderia pseudomallei K96243 3093743 YP_106808.1 CDS BPSL0180 NC_006350.1 184424 185209 D Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 1.6e-31, 44.57% id in 249 aa, and to Escherichia coli 2-dehydro-3-deoxyglucarate aldolase GarL SWALL:GARL_ECOLI (SWALL:P23522) (256 aa) fasta scores: E(): 6e-32, 46.21% id in 238 aa; HpcH/HpaI aldolase 184424..185209 Burkholderia pseudomallei K96243 3094620 YP_106809.1 CDS BPSL0181 NC_006350.1 185206 185982 D Similar to Ralstonia solanacearum signal peptide protein rsc0024 or rs01846 SWALL:Q8Y3F6 (EMBL:AL646057) (252 aa) fasta scores: E(): 2e-31, 43.7% id in 254 aa. C-terminus is similar to the C-terminal region of Neisseria meningitidis hypothetical protein NMB0419 SWALL:Q9K0Y5 (EMBL:AE002398) (198 aa) fasta scores: E(): 2.2e-11, 36.18% id in 152 aa; hypothetical protein 185206..185982 Burkholderia pseudomallei K96243 3094621 YP_106810.1 CDS rodA NC_006350.1 186311 187459 R Similar to Escherichia coli rod shape-determining protein roda MrdB or RodA SWALL:RODA_ECOLI (SWALL:P15035) (370 aa) fasta scores: E(): 1.1e-38, 49.6% id in 379 aa, and to Ralstonia solanacearum probable rod shape-determining rsc0063 or rs05768 SWALL:Q8Y3B7 (EMBL:AL646057) (380 aa) fasta scores: E(): 5.3e-111, 70.18% id in 379 aa; rod shape-determining protein complement(186311..187459) Burkholderia pseudomallei K96243 3092171 YP_106811.1 CDS mrdA NC_006350.1 187471 189927 R Similar to Escherichia coli penicillin-binding protein 2 MrdA or PbpA SWALL:PBP2_ECOLI (SWALL:P08150) (633 aa) fasta scores: E(): 2.2e-44, 40% id in 645 aa, and to Ralstonia solanacearum probable substrate-binding transmembrane protein rsc0062 or rs05767 SWALL:Q8Y3B8 (EMBL:AL646057) (801 aa) fasta scores: E(): 7.3e-132, 61.75% id in 808 aa. CDS is extended at the C-terminus in comparison to all orthologues except the Ralstonia solanacearum protein; penicillin-binding protein complement(187471..189927) Burkholderia pseudomallei K96243 3091495 YP_106812.1 CDS BPSL0184 NC_006350.1 190111 190623 R Similar to Escherichia coli rod shape-determining protein MreD SWALL:MRED_ECOLI (SWALL:P16927) (162 aa) fasta scores: E(): 1.4e-06, 29.41% id in 153 aa, and to Ralstonia solanacearum probable rod shape-determining mred transmembrane protein rsc0061 or rs01884 SWALL:Q8Y3B9 (EMBL:AL646057) (170 aa) fasta scores: E(): 2.7e-43, 65.29% id in 170 aa; rod shape-determining protein complement(190111..190623) Burkholderia pseudomallei K96243 3094616 YP_106813.1 CDS BPSL0185 NC_006350.1 190620 191693 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(190620..191693) Burkholderia pseudomallei K96243 3094617 YP_106814.1 CDS mreB NC_006350.1 191813 192856 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(191813..192856) Burkholderia pseudomallei K96243 3091496 YP_106815.1 CDS gatC NC_006350.1 193227 193520 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 193227..193520 Burkholderia pseudomallei K96243 3092492 YP_106816.1 CDS gatA NC_006350.1 193633 195123 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 193633..195123 Burkholderia pseudomallei K96243 3094691 YP_106817.1 CDS gatB NC_006350.1 195126 196598 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 195126..196598 Burkholderia pseudomallei K96243 3092491 YP_106818.1 CDS BPSL0190 NC_006350.1 196725 197564 D Similar to Ralstonia solanacearum hypothetical protein rsc0138 or rs01008 SWALL:Q8Y343 (EMBL:AL646057) (275 aa) fasta scores: E(): 1.4e-64, 58.84% id in 277 aa, and to Deinococcus radiodurans hypothetical protein DR0132 SWALL:Q9RY20 (EMBL:AE001875) (266 aa) fasta scores: E(): 1.1e-41, 45.21% id in 261 aa; hypothetical protein 196725..197564 Burkholderia pseudomallei K96243 3092222 YP_106819.1 CDS BPSL0191 NC_006350.1 197596 198366 D Similar to the C-terminal region of Homo sapiens DNA repair major apurinic/ apyrimidinic endonuclease APEX or APE or HAP1 or REF1 or APX SWALL:APE1_HUMAN (SWALL:P27695) (317 aa) fasta scores: E(): 1.2e-32, 37.94% id in 253 aa, and to the full length Ralstonia solanacearum exodeoxyribonuclease III protein rsc0140 or rs01010 SWALL:Q8Y341 (EMBL:AL646057) (261 aa) fasta scores: E(): 5.7e-90, 79.45% id in 258 aa; hypothetical protein 197596..198366 Burkholderia pseudomallei K96243 3092223 YP_106820.1 CDS adhC NC_006350.1 198655 199719 R Similar to Mycobacterium tuberculosis, and Mycobacterium bovis NADP-dependent alcohol dehydrogenase AdhC or Adh SWALL:ADH_MYCTU (SWALL:P31975) (346 aa) fasta scores: E(): 3.3e-68, 56% id in 350 aa, and to Xylella fastidiosa NADP-alcohol dehydrogenase XF1136 SWALL:Q9PE92 (EMBL:AE003949) (352 aa) fasta scores: E(): 3.9e-72, 58.48% id in 342 aa; NADP-dependent alcohol dehydrogenase complement(198655..199719) Burkholderia pseudomallei K96243 3094049 YP_106821.1 CDS BPSL0193 NC_006350.1 199931 200875 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1380 SWALL:Q9I3W4 (EMBL:AE004567) (321 aa) fasta scores: E(): 2.2e-59, 56.08% id in 296 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2276 SWALL:Q9I1J8 (EMBL:AE004653) (296 aa) fasta scores: E(): 9.1e-50, 49.11% id in 283 aa; AraC family transcriptional regulator 199931..200875 Burkholderia pseudomallei K96243 3093871 YP_106822.1 CDS BPSL0194 NC_006350.1 201249 202193 R Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc0153 or rs01023 SWALL:Q8Y328 (EMBL:AL646057) (314 aa) fasta scores: E(): 1e-30, 38.64% id in 295 aa. C-terminal region is similar to Pasteurella multocida hypothetical protein PM1190 SWALL:Q9CLN0 (EMBL:AE006159) (257 aa) fasta scores: E(): 4.5e-17, 29.21% id in 243 aa; hypothetical protein complement(201249..202193) Burkholderia pseudomallei K96243 3093872 YP_106823.1 CDS BPSL0195 NC_006350.1 202291 203604 R Similar to Neisseria meningitidis AmpG-related protein NMB0360 SWALL:Q9K133 (EMBL:AE002392) (427 aa) fasta scores: E(): 4.9e-90, 54.76% id in 420 aa, and to Neisseria gonorrhoeae glutamine synthetase SWALL:P95363 (EMBL:U82701) (427 aa) fasta scores: E(): 4.2e-88, 53.57% id in 420 aa. Possible alternative translational start site; hypothetical protein complement(202291..203604) Burkholderia pseudomallei K96243 3092393 YP_106824.1 CDS BPSL0196 NC_006350.1 203616 204230 R Similar to Ralstonia solanacearum hypothetical protein rsc0026 or rs01849 SWALL:Q8Y3F4 (EMBL:AL646057) (215 aa) fasta scores: E(): 1.1e-59, 75.25% id in 194 aa, and to Neisseria meningitidis hypothetical protein NMB0939 SWALL:Q9JZQ6 (EMBL:AE002445) (193 aa) fasta scores: E(): 9.1e-32, 46.87% id in 192 aa; hypothetical protein complement(203616..204230) Burkholderia pseudomallei K96243 3092394 YP_106825.1 CDS metX NC_006350.1 204227 205372 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(204227..205372) Burkholderia pseudomallei K96243 3094355 YP_106826.1 CDS slmA NC_006350.1 205721 206410 R FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein complement(205721..206410) Burkholderia pseudomallei K96243 3094356 YP_106827.1 CDS BPSL0199 NC_006350.1 206377 207180 R Poor database matches. C-terminus is similar to the C-terminal region of Ralstonia solanacearum hypothetical protein rsc0032 or rs01855 SWALL:Q8Y3E8 (EMBL:AL646057) (287 aa) fasta scores: E(): 4.3e-40, 55% id in 240 aa. Internal region is similar to the N-terminus of Neisseria meningitidis hydrolase NMB0040 SWALL:Q9K1P1 (EMBL:AE002362) (237 aa) fasta scores: E(): 1.9e-14, 36.5% id in 189 aa; haloacid dehalogenase complement(206377..207180) Burkholderia pseudomallei K96243 3092249 YP_106828.1 CDS argB NC_006350.1 207177 208076 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(207177..208076) Burkholderia pseudomallei K96243 3092545 YP_106829.1 CDS BPSL0201 NC_006350.1 208670 209950 D Two-component regulatory system family, sensor kinase. Similar to Rhodobacter sphaeroides sensor histidine kinase RegB or PrrB SWALL:REGB_RHOSH (SWALL:Q53068) (462 aa) fasta scores: E(): 4.6e-22, 30.26% id in 423 aa, and to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc0039 or rs01862 SWALL:Q8Y3E1 (EMBL:AL646057) (448 aa) fasta scores: E(): 2.1e-49, 46.62% id in 429 aa; sensor kinase 208670..209950 Burkholderia pseudomallei K96243 3092250 YP_106830.1 CDS BPSL0202 NC_006350.1 209961 210512 D Two-component regulatory system family, response regulator protein. Similar to Rhodovulum sulfidophilum photosynthetic apparature regulatory protein RegA SWALL:REGA_RHOSU (SWALL:O82868) (183 aa) fasta scores: E(): 4.4e-24, 46.32% id in 177 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa4493 SWALL:Q9HVS8 (EMBL:AE004863) (186 aa) fasta scores: E(): 7.5e-29, 52.27% id in 176 aa; response regulator protein 209961..210512 Burkholderia pseudomallei K96243 3093396 YP_106831.1 CDS hslU NC_006350.1 210930 212273 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(210930..212273) Burkholderia pseudomallei K96243 3092996 YP_106832.1 CDS hslV NC_006350.1 212283 212819 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(212283..212819) Burkholderia pseudomallei K96243 3091995 YP_106833.1 CDS BPSL0205 NC_006350.1 213074 213490 R Similar to Ralstonia solanacearum dnaK suppressor protein rsc0046 or rs01869 SWALL:Q8Y3D4 (EMBL:AL646057) (139 aa) fasta scores: E(): 3.6e-41, 86.13% id in 137 aa, and to the C-terminal region of Escherichia coli dnaK suppressor protein DksA SWALL:DKSA_ECOLI (SWALL:P18274) (151 aa) fasta scores: E(): 3.7e-15, 46.21% id in 119 aa; dksA/traR C4-type zinc finger family protein complement(213074..213490) Burkholderia pseudomallei K96243 3093397 YP_106834.1 CDS BPSL0206 NC_006350.1 214040 215152 R Similar to Ralstonia solanacearum hypothetical protein rsc0047 or rs01870 SWALL:Q8Y3D3 (EMBL:AL646057) (362 aa) fasta scores: E(): 1.2e-96, 72.57% id in 361 aa. Weakly similar to the N-terminal region of Pseudomonas chlororaphis protein required for the expression of the nitrile hydratase genes SWALL:P47K_PSECL (SWALL:P31521) (419 aa) fasta scores: E(): 9.5e-18, 29.94% id in 354 aa; hypothetical protein complement(214040..215152) Burkholderia pseudomallei K96243 3091841 YP_106835.1 CDS BPSL0207 NC_006350.1 215294 216571 R Similar to Ralstonia solanacearum hypothetical protein rsc0051 or rs01874 SWALL:Q8Y3C9 (EMBL:AL646057) (397 aa) fasta scores: E(): 2.2e-80, 71.46% id in 424 aa, and to Yersinia pestis hypothetical protein YPO1445 SWALL:Q8ZG67 (EMBL:AJ414148) (396 aa) fasta scores: E(): 3.7e-45, 41.33% id in 421 aa; hypothetical protein complement(215294..216571) Burkholderia pseudomallei K96243 3091842 YP_106836.1 CDS xerC NC_006350.1 216660 217592 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(216660..217592) Burkholderia pseudomallei K96243 3092658 YP_106837.1 CDS BPSL0209 NC_006350.1 217630 218367 R Similar to Ralstonia solanacearum hypothetical protein rsc0053 or rs01876 SWALL:Q8Y3C7 (EMBL:AL646057) (237 aa) fasta scores: E(): 1.2e-43, 53.3% id in 242 aa, and to Pseudomonas fluorescens hypothetical protein SWALL:O05323 (EMBL:Y12268) (240 aa) fasta scores: E(): 2.9e-06, 29.15% id in 247 aa; hypothetical protein complement(217630..218367) Burkholderia pseudomallei K96243 3092659 YP_106838.1 CDS dapF NC_006350.1 218391 219260 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(218391..219260) Burkholderia pseudomallei K96243 3094400 YP_106839.1 CDS BPSL0211 NC_006350.1 219301 220185 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(219301..220185) Burkholderia pseudomallei K96243 3093529 YP_106840.1 CDS metK NC_006350.1 220451 221638 D methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 220451..221638 Burkholderia pseudomallei K96243 3091760 YP_106841.1 CDS BPSL0212A NC_006350.1 221805 222158 R No significant database matches. Doubtful CDS; hypothetical protein complement(221805..222158) Burkholderia pseudomallei K96243 3093530 YP_106842.1 CDS BPSL0213 NC_006350.1 222402 223295 D Weakly similar to Homo sapiens phytanoyl-CoA dioxygenase, peroxisomal precursor PHYH or PAHX SWALL:PAHX_HUMAN (SWALL:O14832) (338 aa) fasta scores: E(): 3.7e-09, 26.08% id in 253 aa. C-terminal region is similar to Ralstonia solanacearum probable hydroxylase rsp0209 or rs06150 SWALL:Q8XTA5 (EMBL:AL646077) (263 aa) fasta scores: E(): 3.9e-44, 47.84% id in 255 aa. Possible alternative translational start site; hypothetical protein 222402..223295 Burkholderia pseudomallei K96243 3094753 YP_106843.1 CDS BPSL0214 NC_006350.1 223564 223818 D hypothetical protein 223564..223818 Burkholderia pseudomallei K96243 3094754 YP_106844.1 CDS BPSL0215 NC_006350.1 223950 224993 D Similar to Xanthomonas axonopodis oxidoreductase XAC3199 SWALL:AAM38043 (EMBL:AE011965) (346 aa) fasta scores: E(): 7.6e-104, 77.03% id in 344 aa, and to Mus musculus voltage-gated potassium channel beta-2 subunit KCNAB2 or KCNB3 or CKbeta2 SWALL:KVB2_MOUSE (SWALL:Q64284) (367 aa) fasta scores: E(): 1.2e-30, 35.93% id in 320 aa; aldo/keto reductase 223950..224993 Burkholderia pseudomallei K96243 3093767 YP_106845.1 CDS BPSL0216 NC_006350.1 225080 225265 R Poor database matches. Similar to the N-terminal region of Mus musculus 4833420e20rik protein SWALL:Q9CPT9 (EMBL:AK014734) (261 aa) fasta scores: E(): 5.8, 36.92% id in 65 aa, and to C-terminal region of Chlamydia pneumoniae hypothetical protein CPN0211 or CP0554 SWALL:Q9Z8X3 (EMBL:AE001607) (98 aa) fasta scores: E(): 1.4, 35.18% id in 54 aa; hypothetical protein complement(225080..225265) Burkholderia pseudomallei K96243 3093768 YP_106846.1 CDS BPSL0217 NC_006350.1 225533 226396 R Similar to Pseudomonas aeruginosa hypothetical protein PA2712 SWALL:Q9I0D0 (EMBL:AE004699) (287 aa) fasta scores: E(): 2.5e-45, 51.94% id in 283 aa, and to Pseudomonas aeruginosa hypothetical protein PA3358 SWALL:Q9HYN8 (EMBL:AE004758) (292 aa) fasta scores: E(): 1.2e-21, 40.2% id in 291 aa; hypothetical protein complement(225533..226396) Burkholderia pseudomallei K96243 3092144 YP_106847.1 CDS BPSL0218 NC_006350.1 226751 228040 R Similar to Ralstonia solanacearum transporter transmembrane protein rsc3069 or rs00513 SWALL:Q8XUW4 (EMBL:AL646073) (428 aa) fasta scores: E(): 1.5e-80, 57.51% id in 426 aa, and to Pseudomonas aeruginosa probable MFS transporter PA5030 SWALL:Q9HUD9 (EMBL:AE004916) (438 aa) fasta scores: E(): 1.4e-67, 48.79% id in 416 aa; transporter protein complement(226751..228040) Burkholderia pseudomallei K96243 3092145 YP_106848.1 CDS BPSL0219 NC_006350.1 228394 228606 D hypothetical protein 228394..228606 Burkholderia pseudomallei K96243 3092801 YP_106849.1 CDS BPSL0220 NC_006350.1 228647 229678 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 228647..229678 Burkholderia pseudomallei K96243 3092802 YP_106850.1 CDS calB NC_006350.1 230375 231793 R Similar to Pseudomonas sp. coniferyl aldehyde dehydrogenase CalB SWALL:CALB_PSESP (SWALL:O86447) (480 aa) fasta scores: E(): 4.8e-77, 47.36% id in 475 aa, and to Pseudomonas aeruginosa probable coniferyl aldehyde dehydrogenase PA0366 SWALL:CALB_PSEAE (SWALL:Q9I6C8) (476 aa) fasta scores: E(): 9.8e-91, 53.03% id in 462 aa; coniferyl aldehyde dehydrogenase complement(230375..231793) Burkholderia pseudomallei K96243 3091832 YP_106851.1 CDS aidB NC_006350.1 231828 233507 R Similar to Escherichia coli aidB protein SWALL:AIDB_ECOLI (SWALL:P33224) (541 aa) fasta scores: E(): 4.5e-89, 47.49% id in 518 aa. Previously sequenced as Burkholderia pseudomallei acyl-CoA dehydrogenase AidB SWALL:Q9ANZ8 (EMBL:AF317886) (554 aa) fasta scores: E(): 0, 99.81% id in 554 aa. Similar to BPSL3386, 60.759% identity (61.993% ungapped) in 553 aa overlap; acyl-CoA dehydrogenase complement(231828..233507) Burkholderia pseudomallei K96243 3092197 YP_106852.1 CDS BPSL0224 NC_006350.1 233741 235384 D Similar to Pseudomonas oleovorans alcohol dehydrogenase [acceptor] AlkJ or AlcO SWALL:ALKJ_PSEOL (SWALL:Q00593) (558 aa) fasta scores: E(): 3.4e-98, 48.26% id in 547 aa, and to Rhizobium loti dehydrogenase, polyethylene glycol dehydrogenase, alcohol dehydrogenase, L-sorbose dehydrogenase MLL3225 SWALL:Q98GQ1 (EMBL:AP003001) (535 aa) fasta scores: E(): 3.8e-117, 56.05% id in 537 aa; GMC oxidoreductase 233741..235384 Burkholderia pseudomallei K96243 3092388 YP_106853.1 CDS BPSL0225 NC_006350.1 235424 236833 R C-terminal region is similar to Salmonella typhimurium flagellar hook-length control protein FliK or FlaE or FlaR SWALL:FLIK_SALTY (SWALL:P26416) (405 aa) fasta scores: E(): 2.5e-13, 32.43% id in 410 aa. Full length CDS is similar to Ralstonia solanacearum probable flagellar hook-length control protein rsp0395 or rs00823 SWALL:Q8XSS2 (EMBL:AL646078) (516 aa) fasta scores: E(): 1.6e-14, 32.62% id in 515 aa; flagellar hook-length control protein complement(235424..236833) Burkholderia pseudomallei K96243 3094003 YP_106854.1 CDS fliJ NC_006350.1 236866 237318 R Similar to Salmonella typhimurium, and Salmonella typhi flagellar fliJ protein FliJ or FlaO or FlaS SWALL:FLIJ_SALTY (SWALL:P26463) (147 aa) fasta scores: E(): 1.9e-09, 32.85% id in 140 aa, and to Burkholderia cepacia flagellar chaperone FliJ SWALL:Q8VQP3 (EMBL:AF453480) (152 aa) fasta scores: E(): 1.2e-41, 80% id in 150 aa; flagellar fliJ protein complement(236866..237318) Burkholderia pseudomallei K96243 3093543 YP_106855.1 CDS fliI NC_006350.1 237324 238895 R Similar to Salmonella typhimurium flagellum-specific ATP synthase FliI or FlaC SWALL:FLII_SALTY (SWALL:P26465) (456 aa) fasta scores: E(): 9.9e-107, 69.53% id in 453 aa, and to Burkholderia cepacia flagellar ATPase FliI SWALL:Q8VQP4 (EMBL:AF453480) (501 aa) fasta scores: E(): 2.4e-158, 88.8% id in 509 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translation start site; flagellum-specific ATP synthase complement(237324..238895) Burkholderia pseudomallei K96243 3094213 YP_106856.1 CDS fliH NC_006350.1 238889 239569 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(238889..239569) Burkholderia pseudomallei K96243 3094212 YP_106857.1 CDS fliG NC_006350.1 239562 240557 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(239562..240557) Burkholderia pseudomallei K96243 3094420 YP_106858.1 CDS fliF NC_006350.1 240547 242343 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(240547..242343) Burkholderia pseudomallei K96243 3094419 YP_106859.1 CDS fliE NC_006350.1 242591 242932 D Similar to Salmonella typhimurium flagellar hook-basal body complex protein FliE or FlaN SWALL:FLIE_SALTY (SWALL:P26462) (103 aa) fasta scores: E(): 8.5e-10, 43.24% id in 111 aa, and to Burkholderia cepacia flagellar hook-basal body protein FliE SWALL:Q8VQP8 (EMBL:AF453480) (114 aa) fasta scores: E(): 1.4e-27, 82.45% id in 114 aa; flagellar hook-basal body complex protein 242591..242932 Burkholderia pseudomallei K96243 3092006 YP_106860.1 CDS fliS NC_006350.1 243065 243499 D Similar to Salmonella typhimurium flagellar protein FliS SWALL:FLIS_SALTY (SWALL:P26609) (135 aa) fasta scores: E(): 2e-19, 50% id in 132 aa, and to Ralstonia solanacearum probable flagellar protein rsp0384 or rs00812 SWALL:Q8XST3 (EMBL:AL646078) (140 aa) fasta scores: E(): 1.3e-17, 50% id in 136 aa; flagellar protein 243065..243499 Burkholderia pseudomallei K96243 3094559 YP_106861.1 CDS BPSL0233 NC_006350.1 243496 243822 D Similar to Ralstonia solanacearum probable flagellar protein rsp0385 or rs00813 SWALL:Q8XST2 (EMBL:AL646078) (118 aa) fasta scores: E(): 0.0005, 34.44% id in 90 aa, and to Yersinia pestis fliT protein ypo1839 SWALL:Q8ZF79 (EMBL:AJ414150) (120 aa) fasta scores: E(): 5.6, 24.24% id in 99 aa; hypothetical protein 243496..243822 Burkholderia pseudomallei K96243 3094004 YP_106862.1 CDS BPSL0234 NC_006350.1 243932 245443 D Poor database matches. Weakly similar to Rhizobium meliloti chemotaxis protein MotD SWALL:MOTD_RHIME (SWALL:Q52964) (475 aa) fasta scores: E(): 0.13, 25.46% id in 483 aa. N-terminal region is weakly similar to Xanthomonas axonopodis hypothetical protein XAC0071 SWALL:AAM34963 (EMBL:AE011630) (346 aa) fasta scores: E(): 0.018, 29.73% id in 333 aa; hypothetical protein 243932..245443 Burkholderia pseudomallei K96243 3093455 YP_106863.1 CDS BPSL0235 NC_006350.1 245440 245757 D Similar to Helicobacter pylori member of ABC transporter family AbcB or JHP1483 SWALL:O30551 (EMBL:AF010307) (90 aa) fasta scores: E(): 1.3e-08, 41.46% id in 82 aa, and to the C-terminal region of Escherichia coli flagellar biosynthetic protein FlhB SWALL:FLHB_ECOLI (SWALL:P76299) (382 aa) fasta scores: E(): 9.2e-07, 39.8% id in 103 aa; export system protein 245440..245757 Burkholderia pseudomallei K96243 3093456 YP_106864.1 CDS BPSL0236 NC_006350.1 245950 246696 D Similar to Ralstonia solanacearum probable transmembrane protein rsc3067 or rs00511 SWALL:Q8XUW6 (EMBL:AL646073) (247 aa) fasta scores: E(): 6.5e-14, 45.7% id in 221 aa, and to Vibrio cholerae hypothetical protein VC0283 SWALL:Q9KV73 (EMBL:AE004116) (225 aa) fasta scores: E(): 1.5e-12, 30.69% id in 215 aa. Lack of similarity at the N-terminus in comparison to other proteins; hypothetical protein 245950..246696 Burkholderia pseudomallei K96243 3094778 YP_106865.1 CDS BPSL0237 NC_006350.1 246793 247818 R Similar to Ralstonia solanacearum hypothetical protein rsc1463 rsc1463 or rs03844 SWALL:Q8XZD8 (EMBL:AL646064) (343 aa) fasta scores: E(): 9.1e-102, 78.59% id in 341 aa, and to Pseudomonas aeruginosa hypothetical protein PA4618 SWALL:Q9HVH3 (EMBL:AE004876) (323 aa) fasta scores: E(): 7.4e-37, 38% id in 321 aa; hypothetical protein complement(246793..247818) Burkholderia pseudomallei K96243 3094779 YP_106866.1 CDS BPSL0238 NC_006350.1 248017 249420 R Similar to Ralstonia solanacearum probable amino-acid transporter transmembrane protein rsc1588 or rs03950 SWALL:Q8XZ18 (EMBL:AL646065) (476 aa) fasta scores: E(): 1.1e-128, 74.83% id in 461 aa, and to Bacillus subtilis hypothetical protein YhdG SWALL:O07576 (EMBL:Y14082) (465 aa) fasta scores: E(): 3.3e-112, 65.43% id in 460 aa; amino-acid transporter transmembrane protein complement(248017..249420) Burkholderia pseudomallei K96243 3092628 YP_106867.1 CDS BPSL0239 NC_006350.1 249662 250318 R Two-component regulatory system family, response regulator protein. Similar to Pseudomonas aeruginosa response regulator GacA SWALL:GACA_PSEAE (SWALL:Q51373) (214 aa) fasta scores: E(): 1.1e-24, 38.38% id in 211 aa, and to Ralstonia solanacearum response regulator transcription regulator protein rsc0292 or rs03259 SWALL:Q8Y2P3 (EMBL:AL646058) (210 aa) fasta scores: E(): 4.7e-30, 45.23% id in 210 aa; response regulator protein complement(249662..250318) Burkholderia pseudomallei K96243 3092629 YP_106868.1 CDS fpr NC_006350.1 251607 252377 R Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SWALL:FENR_AZOVI (SWALL:Q44532) (257 aa) fasta scores: E(): 4.6e-66, 63.67% id in 256 aa, and to Neisseria meningitidis ferredoxin--NADP reductase nma1442 or nmb1044 SWALL:Q9JRE3 (EMBL:AL162756) (258 aa) fasta scores: E(): 1.2e-68, 66.92% id in 257 aa. Similar to BPSL2208, 61.328% identity (61.328% ungapped) in 256 aa overlap; ferredoxin-NADP reductase complement(251607..252377) Burkholderia pseudomallei K96243 3092154 YP_106869.1 CDS BPSL0242 NC_006350.1 252590 253243 R Similar to Escherichia coli threonine efflux protein RhtC SWALL:RHTC_ECOLI (SWALL:P27846) (206 aa) fasta scores: E(): 4.7e-10, 31.5% id in 219 aa, and to Pseudomonas aeruginosa hypothetical protein PA1620 SWALL:Q9I3A2 (EMBL:AE004589) (213 aa) fasta scores: E(): 5.4e-15, 34.41% id in 215 aa; LysE type translocator complement(252590..253243) Burkholderia pseudomallei K96243 3093993 YP_106870.1 CDS BPSL0243 NC_006350.1 253309 254121 R Similar to Salmonella typhimurium cytoplasmic protein STM0813 SWALL:Q8ZQP3 (EMBL:AE008733) (252 aa) fasta scores: E(): 2e-15, 32.53% id in 249 aa, and to Pseudomonas aeruginosa hypothetical protein PA2156 SWALL:Q9I1V9 (EMBL:AE004642) (245 aa) fasta scores: E(): 2.3e-15, 33.99% id in 253 aa; hypothetical protein complement(253309..254121) Burkholderia pseudomallei K96243 3093815 YP_106871.1 CDS BPSL0244 NC_006350.1 254128 254691 R No significant database matches. Possible alternative translational start site; hypothetical protein complement(254128..254691) Burkholderia pseudomallei K96243 3093816 YP_106872.1 CDS BPSL0245 NC_006350.1 255025 256032 D ATPase 255025..256032 Burkholderia pseudomallei K96243 3092515 YP_106873.1 CDS BPSL0246 NC_006350.1 256104 257225 D Similar to Agrobacterium tumefaciens dehydrogenase atu2734 or AGR_C_4955 SWALL:Q8UBW6 (EMBL:AE009221) (367 aa) fasta scores: E(): 3.7e-76, 58.51% id in 364 aa, and to Rhizobium loti hypothetical protein MLL4765 SWALL:Q98DC4 (EMBL:AP003004) (370 aa) fasta scores: E(): 5.5e-76, 59.29% id in 366 aa; FAD dependent oxidoreductase 256104..257225 Burkholderia pseudomallei K96243 3092516 YP_106874.1 CDS BPSL0247 NC_006350.1 257360 257674 D Similar to Ralstonia solanacearum high potential iron-sulfur protein precursor rsc3086 or rs00538 SWALL:HPIS_RALSO (SWALL:Q8XUU7) (103 aa) fasta scores: E(): 1.3e-14, 50.96% id in 104 aa. -terminal region is similar to Rhodocyclus gelatinosus high potential iron-sulfur protein Hip SWALL:HPIS_RHOGE (SWALL:P00265) (74 aa) fasta scores: E(): 1.3e-11, 54.16% id in 72 aa; iron-sulfur protein 257360..257674 Burkholderia pseudomallei K96243 3093330 YP_106875.1 CDS BPSL0248 NC_006350.1 257907 259199 D Similar to Salmonella typhimurium, and Salmonella typhi citrate-proton symporter CitA SWALL:CIT1_SALTY (SWALL:P24115) (434 aa) fasta scores: E(): 3.4e-53, 38.55% id in 428 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4343 SWALL:Q9HW58 (EMBL:AE004850) (439 aa) fasta scores: E(): 9.4e-83, 53.69% id in 406 aa; transporter protein 257907..259199 Burkholderia pseudomallei K96243 3093331 YP_106876.1 CDS dppA NC_006350.1 259630 261258 D Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 8.8e-120, 55.29% id in 519 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa4496 SWALL:Q9HVS5 (EMBL:AE004863) (537 aa) fasta scores: E(): 4.6e-148, 66.17% id in 541 aa; periplasmic dipeptide transport protein 259630..261258 Burkholderia pseudomallei K96243 3091878 YP_106877.1 CDS dppB NC_006350.1 261370 262380 D Similar to Escherichia coli dipeptide transport system permease DppB SWALL:DPPB_ECOLI (SWALL:P37316) (339 aa) fasta scores: E(): 2.7e-85, 65.48% id in 339 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa4503 SWALL:Q9HVR8 (EMBL:AE004864) (336 aa) fasta scores: E(): 5.2e-92, 74.7% id in 336 aa; dipeptide transport system permease 261370..262380 Burkholderia pseudomallei K96243 3091879 YP_106878.1 CDS dppC NC_006350.1 262479 263396 D Similar to Escherichia coli dipeptide transport system permease DppC SWALL:DPPC_ECOLI (SWALL:P37315) (300 aa) fasta scores: E(): 2.3e-63, 56.33% id in 300 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa4504 SWALL:Q9HVR7 (EMBL:AE004864) (303 aa) fasta scores: E(): 1.2e-73, 66.77% id in 304 aa; dipeptide transport system permease 262479..263396 Burkholderia pseudomallei K96243 3092224 YP_106879.1 CDS dppD NC_006350.1 263398 264390 D Similar to Escherichia coli dipeptide transport ATP-binding protein DppD SWALL:DPPD_ECOLI (SWALL:P37314) (327 aa) fasta scores: E(): 1.7e-59, 56.87% id in 320 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4505 SWALL:Q9HVR6 (EMBL:AE004864) (324 aa) fasta scores: E(): 5e-67, 64.37% id in 320 aa; dipeptide transport system ATP-binding protein 263398..264390 Burkholderia pseudomallei K96243 3093136 YP_106880.1 CDS dppF NC_006350.1 264387 265403 D Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 264387..265403 Burkholderia pseudomallei K96243 3093137 YP_106881.1 CDS BPSL0254 NC_006350.1 265516 266544 D Weakly similar to Xanthomonas campestris hypothetical protein XCC2296 SWALL:AAM41575 (EMBL:AE012337) (321 aa) fasta scores: E(): 4.6e-12, 29.73% id in 296 aa, and to Brucella melitensis hypothetical exported protein BMEI0146 SWALL:Q8YJE0 (EMBL:AE009457) (286 aa) fasta scores: E(): 2.3e-07, 29.63% id in 270 aa; hypothetical protein 265516..266544 Burkholderia pseudomallei K96243 3094107 YP_106882.1 CDS BPSL0255 NC_006350.1 267022 267978 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2167 or rs01432 SWALL:Q8XXE7 (EMBL:AL646068) (318 aa) fasta scores: E(): 3e-78, 65.2% id in 319 aa, and to Yersinia pestis membrane protein ypo2702 SWALL:Q8ZD87 (EMBL:AJ414153) (339 aa) fasta scores: E(): 3.5e-52, 54.14% id in 338 aa; hypothetical protein complement(267022..267978) Burkholderia pseudomallei K96243 3094108 YP_106883.1 CDS BPSL0256 NC_006350.1 267975 268727 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2168 or rs01431 SWALL:Q8XXE6 (EMBL:AL646068) (239 aa) fasta scores: E(): 5.1e-62, 69.45% id in 239 aa, and to Yersinia pestis membrane protein ypo2701 SWALL:Q8ZD88 (EMBL:AJ414153) (243 aa) fasta scores: E(): 8.1e-60, 65.41% id in 240 aa; hypothetical protein complement(267975..268727) Burkholderia pseudomallei K96243 3092328 YP_106884.1 CDS BPSL0257 NC_006350.1 269350 270114 R Similar to Ralstonia solanacearum hypothetical protein rsc2169 or rs01430 SWALL:Q8XXE5 (EMBL:AL646068) (247 aa) fasta scores: E(): 7.6e-61, 67.34% id in 245 aa, and to Escherichia coli hypothetical protein YbgL SWALL:YBGL_ECOLI (SWALL:P75746) (244 aa) fasta scores: E(): 2.8e-57, 62.29% id in 244 aa; LamB/YcsF family protein complement(269350..270114) Burkholderia pseudomallei K96243 3092329 YP_106885.1 CDS BPSL0258 NC_006350.1 270173 271252 R Similar to Ralstonia solanacearum hypothetical protein rsc2170 or rs01429 SWALL:Q8XXE4 (EMBL:AL646068) (353 aa) fasta scores: E(): 3.2e-32, 54.44% id in 360 aa, and to an internal region of Saccharomyces cerevisiae urea amidolyase [includes: urea carboxylase; allophanate hydrolase] DUR1,2 SWALL:DUR1_YEAST (SWALL:P32528) (1835 aa) fasta scores: E(): 2.4e-15, 32.19% id in 351 aa; hypothetical protein complement(270173..271252) Burkholderia pseudomallei K96243 3093400 YP_106886.1 CDS BPSL0259 NC_006350.1 271249 271905 R Similar to Ralstonia solanacearum hypothetical protein rsc2171 or rs01428 SWALL:Q8XXE3 (EMBL:AL646068) (215 aa) fasta scores: E(): 1.5e-50, 63.67% id in 212 aa, and to Salmonella typhimurium carboxylase stm0712 SWALL:Q8ZQV8 (EMBL:AE008729) (218 aa) fasta scores: E(): 6.4e-42, 55.18% id in 212 aa; hypothetical protein complement(271249..271905) Burkholderia pseudomallei K96243 3093401 YP_106887.1 CDS BPSL0260 NC_006350.1 272055 272567 D Similar to the Ralstonia solanacearum hypothetical protein rsc1721 or rs02911 SWALL:Q8XYN7 (EMBL:AL646066) (188 aa) fasta scores: E(): 2.1e-33, 55.21% id in 163 aa, and Brucella melitensis hypothetical protein BMEII0603 SWALL:Q8YCC9 (EMBL:AE009696) (199 aa) fasta scores: E(): 4.6e-27, 46.62% id in 163 aa. CDS is truncated at the N-terminus is comparison to other orthologues; hypothetical protein 272055..272567 Burkholderia pseudomallei K96243 3092063 YP_106888.1 CDS BPSL0261 NC_006350.1 272839 273435 R Similar to Ralstonia solanacearum hypothetical protein rsc0089 or rs02262 SWALL:Q8Y391 (EMBL:AL646057) (201 aa) fasta scores: E(): 5.6e-24, 45.55% id in 180 aa, and to Rhizobium loti hypothetical protein mll0364 SWALL:Q98N02 (EMBL:AP002994) (197 aa) fasta scores: E(): 2.6e-16, 35.91% id in 181 aa; 5-formyltetrahydrofolate cyclo-ligase complement(272839..273435) Burkholderia pseudomallei K96243 3092064 YP_106889.1 CDS BPSL0262 NC_006350.1 273457 275412 D Similar to Escherichia coli soluble lytic murein transglycosylase precursor Slt or SltY SWALL:SLT_ECOLI (SWALL:P03810) (645 aa) fasta scores: E(): 5.8e-31, 27.49% id in 662 aa, and to Ralstonia solanacearum probable soluble lytic murein transglycosylase precursor transmembrane protein rsc0088 or rs02278 SWALL:Q8Y392 (EMBL:AL646057) (650 aa) fasta scores: E(): 9.4e-96, 57.01% id in 656 aa; transglycosylase 273457..275412 Burkholderia pseudomallei K96243 3093789 YP_106890.1 CDS BPSL0263 NC_006350.1 275534 276493 D Similar to the C-terminal region of Bos taurus NADH-ubiquinone oxidoreductase 39 kDa subunit, mitochondrial precursor NDUFA9 SWALL:NUEM_BOVIN (SWALL:P34943) (380 aa) fasta scores: E(): 7.2e-17, 31.14% id in 305 aa, and to the full length Ralstonia solanacearum NADH-ubiquinone oxidoreductase oxidoreductase rsc0087 or rs02261 SWALL:Q8Y393 (EMBL:AL646057) (334 aa) fasta scores: E(): 3.6e-40, 47.18% id in 337 aa; hypothetical protein 275534..276493 Burkholderia pseudomallei K96243 3093790 YP_106891.1 CDS BPSL0264 NC_006350.1 276548 277204 D Similar to Pseudomonas pseudoalcaligenes glutathione S-transferase BphX0 SWALL:Q52037 (EMBL:D85853) (203 aa) fasta scores: E(): 7.5e-05, 30.8% id in 198 aa, and to Ralstonia solanacearum hypothetical protein rsc0086 or rs02260 SWALL:Q8Y394 (EMBL:AL646057) (229 aa) fasta scores: E(): 7.5e-42, 57% id in 207 aa; hypothetical protein 276548..277204 Burkholderia pseudomallei K96243 3091442 YP_106892.1 CDS cca NC_006350.1 277201 278442 D catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 277201..278442 Burkholderia pseudomallei K96243 3094540 YP_106893.1 CDS BPSL0266 NC_006350.1 279104 279325 R Similar to the N-terminal regions of Xanthomonas axonopodis RebB protein rebB SWALL:AAM37859 (EMBL:AE011943) (97 aa) fasta scores: E(): 1.5e-19, 86.95% id in 69 aa, and to Caedibacter taeniospiralis RebB protein SWALL:Q46365 (EMBL:U04524) (105 aa) fasta scores: E(): 3.2e-06, 46.03% id in 63 aa. C-terminal region of the CDS appears to be either truncated, or divergent in comparison to other proteins; hypothetical protein complement(279104..279325) Burkholderia pseudomallei K96243 3091443 YP_106894.1 CDS BPSL0267 NC_006350.1 279820 280260 R Similar to Proteus mirabilis flagella synthesis protein FlgN SWALL:FLGN_PROMI (SWALL:P96975) (146 aa) fasta scores: E(): 0.078, 24.82% id in 141 aa, and to Yersinia pestis flagella synthesis protein ypo1796 SWALL:Q8ZFC1 (EMBL:AJ414150) (146 aa) fasta scores: E(): 0.00017, 28.67% id in 143 aa; flagella synthesis protein complement(279820..280260) Burkholderia pseudomallei K96243 3094413 YP_106895.1 CDS BPSL0268 NC_006350.1 280340 280684 R Similar to Salmonella typhimurium negative regulator of flagellin synthesis FlgM or FlgR or MviS SWALL:FLGM_SALTY (SWALL:P26477) (97 aa) fasta scores: E(): 0.59, 29.09% id in 110 aa, and to Ralstonia solanacearum probable negative regulator of flagellin synthesis rsp0340 or rs00833 SWALL:Q8XSX7 (EMBL:AL646078) (106 aa) fasta scores: E(): 0.0033, 36.03% id in 111 aa; negative regulator of flagellin synthesis complement(280340..280684) Burkholderia pseudomallei K96243 3094414 YP_106896.2 CDS flgA NC_006350.1 280788 281552 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(280788..281552) Burkholderia pseudomallei K96243 3094150 YP_106897.1 CDS flgB NC_006350.1 282577 283068 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal-body rod protein FlgB 282577..283068 Burkholderia pseudomallei K96243 3094151 YP_106898.1 CDS flgC NC_006350.1 283152 283577 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 283152..283577 Burkholderia pseudomallei K96243 3094664 YP_106899.2 CDS flgD NC_006350.1 283631 284482 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 283631..284482 Burkholderia pseudomallei K96243 3093785 YP_106900.1 CDS flgE NC_006350.1 284510 285751 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 284510..285751 Burkholderia pseudomallei K96243 3093786 YP_106901.1 CDS flgF NC_006350.1 285778 286539 D FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 285778..286539 Burkholderia pseudomallei K96243 3094777 YP_106902.1 CDS flgG NC_006350.1 286573 287361 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 286573..287361 Burkholderia pseudomallei K96243 3092598 YP_106903.1 CDS flgH NC_006350.1 287382 288104 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes; flagellar basal body L-ring protein 287382..288104 Burkholderia pseudomallei K96243 3092241 YP_106904.2 CDS flgI NC_006350.1 288110 289303 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 288110..289303 Burkholderia pseudomallei K96243 3092242 YP_106905.1 CDS flgJ NC_006350.1 289304 290239 D Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 289304..290239 Burkholderia pseudomallei K96243 3094382 YP_106906.1 CDS BPSL0279 NC_006350.1 290455 291213 D Similar to Escherichia coli hypothetical protein YcgR SWALL:YCGR_ECOLI (SWALL:P76010) (244 aa) fasta scores: E(): 9.3e-24, 33.61% id in 241 aa, and to Yersinia pestis hypothetical protein YPO3220 SWALL:Q8ZC10 (EMBL:AJ414156) (252 aa) fasta scores: E(): 1.8e-23, 32.5% id in 240 aa; hypothetical protein 290455..291213 Burkholderia pseudomallei K96243 3094383 YP_106907.1 CDS flgK NC_006350.1 291419 293422 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 291419..293422 Burkholderia pseudomallei K96243 3093210 YP_106908.1 CDS flgL NC_006350.1 293438 294670 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL 293438..294670 Burkholderia pseudomallei K96243 3093211 YP_106909.1 CDS BPSL0282 NC_006350.1 295038 296345 D Similar to Bacillus caldolyticus uracil permease PyrP SWALL:PYRP_BACCL (SWALL:P41006) (432 aa) fasta scores: E(): 1.2e-48, 40.99% id in 422 aa, and to Escherichia coli purine permease YcdG SWALL:YCDG_ECOLI (SWALL:P75892) (442 aa) fasta scores: E(): 1.3e-106, 70.25% id in 437 aa; permease 295038..296345 Burkholderia pseudomallei K96243 3093674 YP_106910.1 CDS BPSL0283 NC_006350.1 296548 297429 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(296548..297429) Burkholderia pseudomallei K96243 3093675 YP_106911.1 CDS BPSL0284 NC_006350.1 297527 298126 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0979 or rs04313 SWALL:Q8Y0R4 (EMBL:AL646062) (193 aa) fasta scores: E(): 9.4e-22, 43.25% id in 178 aa, and to the N-terminal region of Pseudomonas aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE (SWALL:P14285) (416 aa) fasta scores: E(): 5e-07, 30.86% id in 162 aa; chromate transport protein 297527..298126 Burkholderia pseudomallei K96243 3093131 YP_106912.1 CDS BPSL0285 NC_006350.1 298123 298653 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0980 or rs04384 SWALL:Q8Y0R3 (EMBL:AL646062) (181 aa) fasta scores: E(): 8.1e-20, 36.87% id in 179 aa, and to Bacillus subtilis hypothetical protein YwrA SWALL:O05215 (EMBL:Z93767) (178 aa) fasta scores: E(): 1.7e-10, 29.94% id in 167 aa; chromate transporter 298123..298653 Burkholderia pseudomallei K96243 3093132 YP_106913.1 CDS BPSL0286 NC_006350.1 298984 299322 R Poor database matches. Weakly similar to Rhizobium meliloti hypothetical protein SWALL:Q91UP1 (EMBL:AJ304453) (111 aa) fasta scores: E(): 0.085, 25% id in 84 aa; hypothetical protein complement(298984..299322) Burkholderia pseudomallei K96243 3094537 YP_106914.1 CDS BPSL0287 NC_006350.1 299436 299780 D Similar to Pseudomonas aeruginosa hypothetical protein pa0128 SWALL:Q9I704 (EMBL:AE004450) (113 aa) fasta scores: E(): 1.3e-21, 56.52% id in 115 aa, and to Yersinia pestis hypothetical protein ypo2730 SWALL:Q8ZD62 (EMBL:AJ414153) (113 aa) fasta scores: E(): 2.6e-21, 57.89% id in 114 aa; hypothetical protein 299436..299780 Burkholderia pseudomallei K96243 3094538 YP_106915.1 CDS BPSL0288 NC_006350.1 299798 300538 D Similar to Listeria monocytogenes hypothetical protein lmo0450 SWALL:Q8Y9S3 (EMBL:AL591975) (221 aa) fasta scores: E(): 5.1e-15, 31.73% id in 208 aa, and to Methanosarcina mazei hypothetical protein MM2287 SWALL:AAM31983 (EMBL:AE013470) (277 aa) fasta scores: E(): 3.5e-20, 37.43% id in 195 aa; hypothetical protein 299798..300538 Burkholderia pseudomallei K96243 3094423 YP_106916.1 CDS BPSL0289 NC_006350.1 301079 302212 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 8.1e-14, 29% id in 400 aa, and to Ralstonia solanacearum probable outer membrane porin signal peptide protein rsc3091 or rs00544 SWALL:Q8XUU4 (EMBL:AL646073) (376 aa) fasta scores: E(): 2.7e-40, 42.05% id in 390 aa; outer membrane porin 301079..302212 Burkholderia pseudomallei K96243 3094401 YP_106917.1 CDS BPSL0290 NC_006350.1 302370 303203 R hypothetical protein complement(302370..303203) Burkholderia pseudomallei K96243 3094402 YP_106918.1 CDS BPSL0291 NC_006350.1 303251 303814 R hypothetical protein complement(303251..303814) Burkholderia pseudomallei K96243 3092426 YP_106919.1 CDS BPSL0292 NC_006350.1 304182 305252 R Weakly similar to Chlorobium tepidum hypothetical protein CT1155 SWALL:AAM72388 (EMBL:AE012876) (354 aa) fasta scores: E(): 0.00043, 23.89% id in 318 aa, and Methanopyrus kandleri predicted integral membrane protein MK1387 SWALL:Q8TVK2 (EMBL:AE010432) (327 aa) fasta scores: E(): 0.0039, 23.88% id in 314 aa. CDS is extended athe N-terminus in comparison to other proteins. Possible alternative translational start site; hypothetical protein complement(304182..305252) Burkholderia pseudomallei K96243 3092427 YP_106920.1 CDS BPSL0293 NC_006350.1 305245 306513 R No significant database matches to the full length CDS. Internal region is weakly similar to the N-terminal region of Homo sapiens ceramide glucosyltransferase UGCG SWALL:CEGT_HUMAN (SWALL:Q16739) (394 aa) fasta scores: E(): 1.3e-14, 27.58% id in 319 aa. C-terminal region is similar to Synechocystis sp. ceramide glucosyltransferase slr0813 SWALL:P74046 (EMBL:D90911) (389 aa) fasta scores: E(): 3.1e-32, 29.7% id in 377 aa. Possible alternative translational start site; glucosyltransferase complement(305245..306513) Burkholderia pseudomallei K96243 3094737 YP_106921.1 CDS BPSL0294 NC_006350.1 306895 308424 R C-terminal region is similar to Pseudomonas aeruginosa porin B precursor OprB SWALL:PORB_PSEAE (SWALL:Q51485) (454 aa) fasta scores: E(): 3.1e-09, 27.09% id in 465 aa, and to Ralstonia solanacearum porin B precursor rsp1632 or rs02190 SWALL:Q8XPK8 (EMBL:AL646086) (456 aa) fasta scores: E(): 4.4e-08, 29.29% id in 471 aa. Possible alternative translational start site; hypothetical protein complement(306895..308424) Burkholderia pseudomallei K96243 3094738 YP_106922.1 CDS BPSL0295 NC_006350.1 310066 311724 D N-terminal region is similar to Pseudomonas aeruginosa manganese transport protein MntH2 SWALL:MNT2_PSEAE (SWALL:Q9RPF2) (438 aa) fasta scores: E(): 7.4e-14, 26.54% id in 437 aa. Similar to Burkholderia cepacia genomovar III natural resistance-associated macrophage protein NRAMP SWALL:Q8VP26 (EMBL:AY028431) (548 aa) fasta scores: E(): 4.1e-176, 82.24% id in 552 aa; natural resistance-associated macrophage protein 310066..311724 Burkholderia pseudomallei K96243 3093215 YP_106923.1 CDS BPSL0296 NC_006350.1 312294 312518 D Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0126 or rs00996 SWALL:Q8Y355 (EMBL:AL646057) (73 aa) fasta scores: E(): 3.5e-11, 60.81% id in 74 aa; hypothetical protein 312294..312518 Burkholderia pseudomallei K96243 3093216 YP_106924.1 CDS gor NC_006350.1 312715 314076 D Similar to Pseudomonas aeruginosa glutathione reductase Gor SWALL:GSHR_PSEAE (SWALL:P23189) (451 aa) fasta scores: E(): 3.5e-83, 53.91% id in 447 aa, and to Burkholderia cepacia glutathione reductase Gor SWALL:GSHR_BURCE (SWALL:P48639) (449 aa) fasta scores: E(): 7.2e-91, 56.6% id in 447 aa; glutathione reductase 312715..314076 Burkholderia pseudomallei K96243 3092896 YP_106925.1 CDS argG NC_006350.1 314669 316009 D catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 314669..316009 Burkholderia pseudomallei K96243 3091609 YP_106926.1 CDS BPSL0299 NC_006350.1 316171 316806 D hypothetical protein 316171..316806 Burkholderia pseudomallei K96243 3091772 YP_106927.1 CDS BPSL0300 NC_006350.1 316896 317621 D Poor database matches. Similar to Xanthomonas axonopodis hypothetical protein xac4135 SWALL:AAM38970 (EMBL:AE012063) (233 aa) fasta scores: E(): 1.3e-20, 37.33% id in 233 aa; hypothetical protein 316896..317621 Burkholderia pseudomallei K96243 3091773 YP_106928.1 CDS BPSL0301 NC_006350.1 317943 318191 D Similar to Salmonella typhimurium copper chaperone stm0355 SWALL:Q8ZRG5 (EMBL:AE008711) (64 aa) fasta scores: E(): 5.8e-06, 40.98% id in 61 aa, and to Brucella melitensis heavy metal binding protein bmei1032 SWALL:Q8YGX3 (EMBL:AE009543) (65 aa) fasta scores: E(): 0.00018, 43.07% id in 65 aa; cheavy metal binding protein 317943..318191 Burkholderia pseudomallei K96243 3093380 YP_106929.1 CDS silP NC_006350.1 318749 321172 R Similar to Salmonella typhimurium cation transporting P-type ATPase SilP SWALL:SILP_SALTY (SWALL:Q9ZHC7) (824 aa) fasta scores: E(): 4.4e-125, 51.5% id in 833 aa, and to Rhizobium loti cation transporting P-type ATPase mlr5325 SWALL:Q98C24 (EMBL:AP003006) (839 aa) fasta scores: E(): 4.9e-128, 57.19% id in 778 aa; cation transporting P-type ATPase complement(318749..321172) Burkholderia pseudomallei K96243 3094207 YP_106930.1 CDS BPSL0303 NC_006350.1 321837 322511 D Similar to Xanthomonas axonopodis hypothetical protein XAC0838 SWALL:AAM35726 (EMBL:AE011715) (212 aa) fasta scores: E(): 1.8e-45, 67.82% id in 202 aa, and to Rhizobium loti hypothetical protein MLL4130 SWALL:Q98EQ7 (EMBL:AP003003) (212 aa) fasta scores: E(): 4.8e-34, 54.63% id in 205 aa; lipoprotein 321837..322511 Burkholderia pseudomallei K96243 3093381 YP_106931.1 CDS BPSL0304 NC_006350.1 322508 323356 D Similar to Ralstonia solanacearum glycine rich transmembrane protein rsc0663 or rs01568 SWALL:Q8Y1M7 (EMBL:AL646060) (279 aa) fasta scores: E(): 1.5e-32, 51.31% id in 267 aa, and to Xanthomonas axonopodis glycine rich protein xac0839 SWALL:AAM35727 (EMBL:AE011716) (286 aa) fasta scores: E(): 7.8e-32, 47.4% id in 270 aa; hypothetical protein 322508..323356 Burkholderia pseudomallei K96243 3094247 YP_106932.1 CDS BPSL0305 NC_006350.1 323353 323853 D Similar to Xanthomonas campestris hypothetical protein xcc0785 SWALL:AAM40100 (EMBL:AE012178) (164 aa) fasta scores: E(): 1.4e-23, 49.32% id in 148 aa, and to Ralstonia solanacearum hypothetical protein rsc0662 or rs01567 SWALL:Q8Y1M8 (EMBL:AL646060) (173 aa) fasta scores: E(): 2.6e-17, 37.03% id in 162 aa; hypothetical protein 323353..323853 Burkholderia pseudomallei K96243 3094248 YP_106933.1 CDS BPSL0306 NC_006350.1 323887 324354 D hypothetical protein 323887..324354 Burkholderia pseudomallei K96243 3093883 YP_106934.1 CDS BPSL0307 NC_006350.1 324453 325754 D Similar to Alcaligenes eutrophus nickel and cobalt resistance protein CnrC SWALL:CNRC_ALCEU (SWALL:P37974) (418 aa) fasta scores: E(): 1.2e-10, 27.8% id in 410 aa, and to Ralstonia solanacearum outer membrane cation efflux protein rsp0926 or rs05407 SWALL:Q8XRD2 (EMBL:AL646081) (434 aa) fasta scores: E(): 2.4e-35, 35.96% id in 431 aa; outer membrane efflux protein 324453..325754 Burkholderia pseudomallei K96243 3093884 YP_106935.1 CDS BPSL0308 NC_006350.1 325765 327336 D N-terminal region is similar to Salmonella typhimurium membrane fusion protein SilB precursor silB SWALL:SILB_SALTY (SWALL:Q9ZHD0) (430 aa) fasta scores: E(): 1.8e-37, 31.41% id in 417 aa. Full length CDS is similar to Ralstonia solanacearum cation efflux system transmembrane protein rsp0927 or rs05406 SWALL:Q8XRD1 (EMBL:AL646081) (513 aa) fasta scores: E(): 3.2e-51, 38.89% id in 527 aa; hypothetical protein 325765..327336 Burkholderia pseudomallei K96243 3092245 YP_106936.1 CDS silA NC_006350.1 327333 330545 D Similar to Salmonella typhimurium cation efflux system protein SilA SWALL:SILA_SALTY (SWALL:Q9ZHC9) (1048 aa) fasta scores: E(): 0, 61.03% id in 1047 aa, and to Ralstonia solanacearum probable cation efflux system transmembrane protein rsp0928 or rs05405 SWALL:Q8XRD0 (EMBL:AL646081) (1047 aa) fasta scores: E(): 0, 72.76% id in 1039 aa; cation efflux system protein 327333..330545 Burkholderia pseudomallei K96243 3094206 YP_106937.1 CDS BPSL0310 NC_006350.1 330542 330883 D Similar to Ralstonia solanacearum hypothetical signal peptide protein rsp0929 or rs05404 SWALL:Q8XRC9 (EMBL:AL646081) (114 aa) fasta scores: E(): 1.2e-07, 44.24% id in 113 aa. C-terminus is similar to the C-terminal region of Rhizobium meliloti hypothetical signal peptide protein smc02284 r00588 or smc02284 SWALL:Q92S41 (EMBL:AL591784) (94 aa) fasta scores: E(): 0.006, 36.98% id in 73 aa; hypothetical protein 330542..330883 Burkholderia pseudomallei K96243 3092246 YP_106938.1 CDS BPSL0311 NC_006350.1 331093 331539 D Poor database matches. C-terminus is weakly similar to the C-terminal region of Gallus gallus avidin-related protein 4/5 precursor SWALL:AVR4_CHICK (SWALL:P56734) (150 aa) fasta scores: E(): 0.0092, 27.82% id in 115 aa; avidin family protein 331093..331539 Burkholderia pseudomallei K96243 3092301 YP_106939.1 CDS glmS1 NC_006350.1 331614 333446 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(331614..333446) Burkholderia pseudomallei K96243 3091987 YP_106940.1 CDS glmU NC_006350.1 333510 334871 R [includes: UDP-N-acetylglucosamine pyrophosphorylase; glucosamine-1-phosphate N-acetyltransferase]; Similar to Escherichia coli, and Escherichia coli O157:H7 bifunctional glmU protein [includes: UDP-N-acetylglucosamine pyrophosphorylase; glucosamine-1-phosphate N-acetyltransferase] GlmU SWALL:GLMU_ECO57 (SWALL:P17114) (456 aa) fasta scores: E(): 1.1e-85, 54.42% id in 452 aa, and to Ralstonia solanacearum probable UDP-N-acetylglucosamine pyrophosphorylase rsc0177 or rs01048 SWALL:Q8Y304 (EMBL:AL646057) (455 aa) fasta scores: E(): 1.3e-111, 68.36% id in 452 aa; bifunctional glmU protein complement(333510..334871) Burkholderia pseudomallei K96243 3093120 YP_106941.1 CDS BPSL0314 NC_006350.1 335475 336470 R TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase complement(335475..336470) Burkholderia pseudomallei K96243 3092302 YP_106942.1 CDS BPSL0315 NC_006350.1 336467 336871 R Similar to Ralstonia solanacearum hypothetical protein rsc0157 or rs01027 SWALL:Q8Y324 (EMBL:AL646057) (130 aa) fasta scores: E(): 1.2e-34, 69.04% id in 126 aa, and to Escherichia coli dihydroneopterin aldolase FolB SWALL:FOLB_ECOLI (SWALL:P31055) (122 aa) fasta scores: E(): 1.8, 23.21% id in 112 aa; hypothetical protein complement(336467..336871) Burkholderia pseudomallei K96243 3092799 YP_106943.1 CDS BPSL0316 NC_006350.1 336953 337834 R Poor database matches. C-terminal region is similar to Ralstonia solanacearum oxidoreductase rsc0156 or rs01026 SWALL:Q8Y325 (EMBL:AL646057) (267 aa) fasta scores: E(): 4.1e-14, 44.96% id in 258 aa. Possible alternative translational start site; hypothetical protein complement(336953..337834) Burkholderia pseudomallei K96243 3092800 YP_106944.1 CDS BPSL0317 NC_006350.1 337902 339092 D Similar to Ralstonia solanacearum hypothetical protein rsc0155 or rs01025 SWALL:Q8Y326 (EMBL:AL646057) (397 aa) fasta scores: E(): 1.5e-78, 56.52% id in 391 aa, and to Neisseria meningitidis hypothetical protein nma2076 SWALL:Q9JSY7 (EMBL:AL162758) (405 aa) fasta scores: E(): 4.7e-58, 47.69% id in 390 aa; hypothetical protein 337902..339092 Burkholderia pseudomallei K96243 3092448 YP_106945.1 CDS BPSL0318 NC_006350.1 339110 339304 D Similar to Thermoanaerobacter tengcongensis hypothetical protein TTE1181 SWALL:Q8RAN1 (EMBL:AE013080) (70 aa) fasta scores: E(): 0.027, 31.25% id in 64 aa, and to Bacillus halodurans hypothetical protein bh1226 SWALL:Q9KDI7 (EMBL:AP001511) (71 aa) fasta scores: E(): 0.3, 26.31% id in 57 aa; hypothetical protein 339110..339304 Burkholderia pseudomallei K96243 3092449 YP_106946.1 CDS BPSL0319 NC_006350.1 339593 340132 R hypothetical protein complement(339593..340132) Burkholderia pseudomallei K96243 3092414 YP_106947.1 CDS BPSL0320 NC_006350.1 340129 341037 R Similar to Escherichia coli fructokinase CscK SWALL:SCRK_ECOLI (SWALL:P40713) (307 aa) fasta scores: E(): 9.5e-18, 32.53% id in 292 aa, and to Deinococcus radiodurans fructokinase dr0728 SWALL:Q9RWE1 (EMBL:AE001928) (303 aa) fasta scores: E(): 6.8e-56, 54.05% id in 296 aa; PfkB family carbohydrate kinase complement(340129..341037) Burkholderia pseudomallei K96243 3092415 YP_106948.1 CDS BPSL0321 NC_006350.1 341034 342491 R Similar to Xanthomonas campestris hypothetical protein xcc1510 SWALL:Q8PAH3 (EMBL:AE012251) (401 aa) fasta scores: E(): 1.8e-88, 59.11% id in 406 aa, and to Xylella fastidiosa hypothetical protein xf1611 SWALL:Q9PCZ3 (EMBL:AE003988) (401 aa) fasta scores: E(): 4.8e-86, 57.88% id in 406 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein complement(341034..342491) Burkholderia pseudomallei K96243 3091776 YP_106949.1 CDS BPSL0322 NC_006350.1 342488 343507 R Similar to Bacillus subtilis degradation activator DegA SWALL:DEGA_BACSU (SWALL:P37947) (337 aa) fasta scores: E(): 5.3e-19, 30.29% id in 340 aa, and to Xanthomonas campestris transcriptional regulator xcc3356 SWALL:Q8P5I5 (EMBL:AE012454) (343 aa) fasta scores: E(): 2.8e-24, 37.72% id in 334 aa; LacI family regulatory protein complement(342488..343507) Burkholderia pseudomallei K96243 3091777 YP_106950.1 CDS BPSL0323 NC_006350.1 343678 345237 R Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 5.7e-40, 34.86% id in 522 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis transmembrane protein rsp0303 or rs05471 SWALL:Q8XT14 (EMBL:AL646077) (515 aa) fasta scores: E(): 6.1e-47, 37.4% id in 516 aa; methyl-accepting chemotaxis protein complement(343678..345237) Burkholderia pseudomallei K96243 3093691 YP_106951.1 CDS BPSL0324 NC_006350.1 345813 346853 R Similar to Pseudomonas aeruginosa hypothetical protein pa2026 SWALL:YK26_PSEAE (SWALL:P39879) (333 aa) fasta scores: E(): 3.5e-85, 66.66% id in 333 aa, and to Xanthomonas campestris hypothetical protein xcc3822 SWALL:Q8P489 (EMBL:AE012503) (330 aa) fasta scores: E(): 2.8e-72, 60.12% id in 326 aa; sodium bile acid symporter family protein complement(345813..346853) Burkholderia pseudomallei K96243 3093692 YP_106952.1 CDS BPSL0325 NC_006350.1 347284 347712 D hypothetical protein 347284..347712 Burkholderia pseudomallei K96243 3093037 YP_106953.1 CDS BPSL0326 NC_006350.1 348120 349196 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.1e-10, 31.45% id in 391 aa, and to Ralstonia solanacearum probable porin precursor transmembrane protein rsp0337 or rs00714 SWALL:Q8XSY0 (EMBL:AL646078) (351 aa) fasta scores: E(): 1.6e-71, 55.84% id in 351 aa; outer membrane porin 348120..349196 Burkholderia pseudomallei K96243 3093038 YP_106954.1 CDS BPSL0327 NC_006350.1 349356 350318 D Similar to Rhizobium loti transcriptional regulator mll4082 SWALL:Q98EU3 (EMBL:AP003003) (301 aa) fasta scores: E(): 3.6e-32, 39.24% id in 293 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 2.2e-31, 38.53% id in 314 aa; LysR family transcriptional regulator 349356..350318 Burkholderia pseudomallei K96243 3094187 YP_106955.1 CDS BPSL0328 NC_006350.1 350794 351753 R Similar to Ralstonia solanacearum hypothetical protein rsc0255 or rs00690 SWALL:Q8Y2T0 (EMBL:AL646058) (327 aa) fasta scores: E(): 4.6e-91, 78.23% id in 317 aa, and to Caulobacter crescentus hypothetical protein cc2372 SWALL:Q9A5S5 (EMBL:AE005906) (335 aa) fasta scores: E(): 6.2e-73, 63.77% id in 323 aa; 2-nitropropane dioxygenase complement(350794..351753) Burkholderia pseudomallei K96243 3094188 YP_106956.1 CDS BPSL0329 NC_006350.1 351992 352942 D Similar to Ralstonia solanacearum hypothetical haloacetate dehalogenase H-1 protein rsc0256 or rs00691 SWALL:Q8Y2S9 (EMBL:AL646058) (308 aa) fasta scores: E(): 2.3e-80, 64.66% id in 300 aa, and to Anabaena sp. hypothetical protein ALR0039 SWALL:Q8Z0Q1 (EMBL:AP003581) (291 aa) fasta scores: E(): 1.6e-62, 52.94% id in 289 aa. CDS contains extra residues at the N-terminus in comparison to some orthologues. Possible alternative translational start site; hydrolase 351992..352942 Burkholderia pseudomallei K96243 3091476 YP_106957.1 CDS BPSL0330 NC_006350.1 353024 353512 R Similar to Bacillus subtilis transcriptional regulator LrpC SWALL:LRPC_BACSU (SWALL:P96582) (144 aa) fasta scores: E(): 1.1e-09, 29.32% id in 133 aa, and to Rhizobium loti transcriptional regulator mll3910 SWALL:Q98F66 (EMBL:AP003003) (152 aa) fasta scores: E(): 3.1e-32, 63.63% id in 143 aa. CDS is extended at the N-terminus in comparison to orthologues; transcription regulator AsnC complement(353024..353512) Burkholderia pseudomallei K96243 3091477 YP_106958.1 CDS BPSL0331 NC_006350.1 353624 354538 D Similar to Rhizobium loti hypothetical protein mlr3911 SWALL:Q98F65 (EMBL:AP003003) (301 aa) fasta scores: E(): 8.9e-60, 58.3% id in 295 aa, and to Rhizobium meliloti hypothetical transmembrane protein r00343 or smc00424 SWALL:Q92SM8 (EMBL:AL591783) (304 aa) fasta scores: E(): 1.6e-57, 56.61% id in 295 aa; hypothetical protein 353624..354538 Burkholderia pseudomallei K96243 3091849 YP_106959.1 CDS BPSL0332 NC_006350.1 355165 355671 R Similar to Ralstonia solanacearum hypothetical protein rsc0260 or rs00695 SWALL:Q8Y2S5 (EMBL:AL646058) (170 aa) fasta scores: E(): 6.2e-42, 70.73% id in 164 aa, and to Aeropyrum pernix hypothetical protein ape2540 SWALL:Q9Y8U3 (EMBL:AP000064) (152 aa) fasta scores: E(): 4.5e-09, 33.33% id in 150 aa; hypothetical protein complement(355165..355671) Burkholderia pseudomallei K96243 3091850 YP_106960.1 CDS BPSL0333 NC_006350.1 355727 356662 R catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase complement(355727..356662) Burkholderia pseudomallei K96243 3091860 YP_106961.1 CDS BPSL0334 NC_006350.1 356748 357689 R Similar to Ralstonia solanacearum 2-hydroxyacid dehydrogenase oxidoreductase rsc0262 or rs00697 SWALL:Q8Y2S3 (EMBL:AL646058) (313 aa) fasta scores: E(): 5.5e-65, 57.5% id in 313 aa, and to Salmonella typhi 2-hydroxyacid dehydrogenase in phoH-csgG intergenic region sty1172 SWALL:Q8Z7M6 (EMBL:AL627269) (312 aa) fasta scores: E(): 1.6e-54, 50.16% id in 313 aa; hypothetical protein complement(356748..357689) Burkholderia pseudomallei K96243 3091861 YP_106962.1 CDS BPSL0335 NC_006350.1 357694 358107 R Similar to Bordetella pertussis hypothetical protein SWALL:O30442 (EMBL:AF006000) (143 aa) fasta scores: E(): 7.7e-40, 71.85% id in 135 aa, and to Pseudomonas aeruginosa probable ring-cleaving dioxygenase pa0817 SWALL:Q9I5C2 (EMBL:AE004517) (141 aa) fasta scores: E(): 2.1e-38, 68.34% id in 139 aa; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein complement(357694..358107) Burkholderia pseudomallei K96243 3094865 YP_106963.1 CDS BPSL0336 NC_006350.1 358260 358910 D Similar to Ralstonia solanacearum hypothetical protein rsc1344 or rs02866 SWALL:Q8XZQ1 (EMBL:AL646064) (222 aa) fasta scores: E(): 1.4e-23, 44.04% id in 193 aa, and to Caulobacter crescentus hypothetical protein cc2185 SWALL:Q9A6A9 (EMBL:AE005890) (207 aa) fasta scores: E(): 3.8e-20, 37.56% id in 205 aa; hypothetical protein 358260..358910 Burkholderia pseudomallei K96243 3094866 YP_106964.1 CDS BPSL0337 NC_006350.1 358939 359349 R Similar to Xanthomonas campestris MutT/NUDIX family protein xcc0078 SWALL:Q8PEA3 (EMBL:AE012101) (144 aa) fasta scores: E(): 5.4e-24, 54.88% id in 133 aa, and to the C-terminal region of Methanococcus jannaschii ADP-ribose pyrophosphatase NudF SWALL:ADPP_METJA (SWALL:Q58549) (169 aa) fasta scores: E(): 1.2e-08, 39.47% id in 114 aa; MutT/NUDIX family protein complement(358939..359349) Burkholderia pseudomallei K96243 3092090 YP_106965.1 CDS plcN2 NC_006350.1 359487 361604 R Similar to Pseudomonas aeruginosa non-hemolytic phospholipase C precursor PlcN SWALL:PHLN_PSEAE (SWALL:P15713) (692 aa) fasta scores: E(): 2.5e-77, 48.87% id in 708 aa, and to Burkholderia pseudomallei non-hemolytic phospholipase C precursor PlcN SWALL:PHLN_BURPS (SWALL:Q9RGS8) (700 aa) fasta scores: E(): 2.2e-128, 52.84% id in 721 aa. Similar to BPSL2403, 52.705% identity (56.632% ungapped) in 721 aa overlap; non-hemolytic phospholipase C complement(359487..361604) Burkholderia pseudomallei K96243 3092755 YP_106966.1 CDS BPSL0339 NC_006350.1 361650 361946 R lipoprotein complement(361650..361946) Burkholderia pseudomallei K96243 3092091 YP_106967.1 CDS BPSL0340 NC_006350.1 362184 362642 R Similar to Escherichia coli, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI SWALL:LRP_ENTAE (SWALL:P19494) (163 aa) fasta scores: E(): 1.5e-21, 44% id in 150 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1377 or rs02081 SWALL:Q8XQA9 (EMBL:AL646084) (152 aa) fasta scores: E(): 2.2e-48, 80.92% id in 152 aa; transcription regulator AsnC complement(362184..362642) Burkholderia pseudomallei K96243 3093275 YP_106968.1 CDS BPSL0341 NC_006350.1 362767 363495 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1376 or rs02082 SWALL:Q8XQB0 (EMBL:AL646084) (250 aa) fasta scores: E(): 4.5e-70, 78.47% id in 223 aa. Weakly similar to Bacillus subtilis branched-chain amino acid transport protein AzlC SWALL:AZLC_BACSU (SWALL:O07942) (254 aa) fasta scores: E(): 8.2e-10, 21.25% id in 240 aa; transport protein 362767..363495 Burkholderia pseudomallei K96243 3093276 YP_106969.1 CDS BPSL0342 NC_006350.1 363492 363794 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1375 or rs02083 SWALL:Q8XQB1 (EMBL:AL646084) (100 aa) fasta scores: E(): 1.8e-24, 73.46% id in 98 aa, and to Rhizobium loti hypothetical protein msl2426 SWALL:Q98IF5 (EMBL:AP002999) (99 aa) fasta scores: E(): 7.8e-23, 69.69% id in 99 aa; hypothetical protein 363492..363794 Burkholderia pseudomallei K96243 3091845 YP_106970.1 CDS BPSL0343 NC_006350.1 363791 364624 D Similar to Deinococcus radiodurans hydrolase-related protein dr1403 SWALL:Q9RUI3 (EMBL:AE001985) (277 aa) fasta scores: E(): 2.8e-32, 38.62% id in 277 aa. C-terminus is similar to the C-terminal region of Ralstonia solanacearum hydrolase-related protein rsc3406 or rs01715 SWALL:Q8XTY9 (EMBL:AL646075) (266 aa) fasta scores: E(): 1.3e-29, 38.96% id in 231 aa; hydrolase 363791..364624 Burkholderia pseudomallei K96243 3091846 YP_106971.1 CDS BPSL0344 NC_006350.1 364988 365581 R Similar to Ralstonia solanacearum probable lipoprotein rsc0373 or rs03341 SWALL:Q8Y2G3 (EMBL:AL646058) (200 aa) fasta scores: E(): 1.9e-23, 39.17% id in 194 aa, and to Xanthomonas campestris hypothetical protein xcc2038 SWALL:Q8P928 (EMBL:AE012309) (184 aa) fasta scores: E(): 8.4e-18, 36.75% id in 185 aa; hypothetical protein complement(364988..365581) Burkholderia pseudomallei K96243 3092382 YP_106972.1 CDS BPSL0345 NC_006350.1 365609 368338 R No significant database matches to the full length CDS. Internal region is weakly similar to the C-terminal region of Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 2.5e-17, 24.01% id in 658 aa; hypothetical protein complement(365609..368338) Burkholderia pseudomallei K96243 3092383 YP_106973.1 CDS BPSL0346 NC_006350.1 369407 370309 R Similar to Escherichia coli dihydrodipicolinate synthase DapA SWALL:DAPA_ECOLI (SWALL:P05640) (292 aa) fasta scores: E(): 7.7e-22, 33.45% id in 278 aa, and to Ralstonia solanacearum probable dihydrodipicolinate synthase-related transmembrane protein rsc0665 or rs01570 SWALL:Q8Y1M5 (EMBL:AL646060) (304 aa) fasta scores: E(): 2.1e-40, 44.8% id in 279 aa; dihydrodipicolinate synthetase complement(369407..370309) Burkholderia pseudomallei K96243 3091480 YP_106974.1 CDS BPSL0347 NC_006350.1 370573 371082 R No significant database matches to the full length CDS. C-terminal region is similar to Burkholderia cepacia insertion element IS402 hypothetical protein SWALL:YI22_BURCE (SWALL:P24537) (147 aa) fasta scores: E(): 2.1e-17, 53.53% id in 99 aa, and Ralstonia solanacearum probable tis1421-transposase orfa protein SWALL:Q8XGS3 (EMBL:AL646082) (134 aa) fasta scores: E(): 1.5e-14, 51.04% id in 96 aa; insertion element protein complement(370573..371082) Burkholderia pseudomallei K96243 3091481 YP_106975.1 CDS BPSL0348 NC_006350.1 371477 372250 R Poor database matches. C-terminal region is weakly similar to Ralstonia solanacearum hypothetical protein rsc0613 or rs01514 SWALL:Q8Y1S6 (EMBL:AL646060) (190 aa) fasta scores: E(): 0.024, 25% id in 188 aa; hypothetical protein complement(371477..372250) Burkholderia pseudomallei K96243 3092575 YP_106976.1 CDS BPSL0349 NC_006350.1 372396 372953 D Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0613 or rs01514 SWALL:Q8Y1S6 (EMBL:AL646060) (190 aa) fasta scores: E(): 1.3e-15, 34.97% id in 183 aa; hypothetical protein 372396..372953 Burkholderia pseudomallei K96243 3092576 YP_106977.1 CDS BPSL0350 NC_006350.1 373423 374079 D Similar to the C-terminal regions of Brucella melitensis nitrogen assimilation regulatory protein bmei0868 SWALL:Q8YHD3 (EMBL:AE009527) (453 aa) fasta scores: E(): 1.6e-11, 33.88% id in 183 aa, and to Salmonella typhimurium transcriptional regulator of two-component regulator protein YfhA SWALL:Q8ZN32 (EMBL:AE008816) (445 aa) fasta scores: E(): 1.3e-10, 34.83% id in 178 aa; Fis family transcriptional regulator 373423..374079 Burkholderia pseudomallei K96243 3092731 YP_106978.1 CDS sbp NC_006350.1 374548 375561 D Similar to Salmonella typhimurium sulfate-binding protein precursor Sbp SWALL:SUBI_SALTY (SWALL:P02906) (329 aa) fasta scores: E(): 3.4e-65, 55.52% id in 326 aa, and to Ralstonia solanacearum probable sulfate-binding precursor signal peptide protein rsc1336 or rs02858 SWALL:Q8XZQ9 (EMBL:AL646064) (336 aa) fasta scores: E(): 1.3e-68, 59.13% id in 323 aa. BPSL1839, 58.480% identity (60.606% ungapped) in 342 aa overlap; sulfate-binding protein 374548..375561 Burkholderia pseudomallei K96243 3092931 YP_106979.1 CDS BPSL0353 NC_006350.1 376064 377755 D Similar to Ralstonia solanacearum probable carboxypeptidase rsc1003 or rs04289 SWALL:Q8Y0P0 (EMBL:AL646062) (543 aa) fasta scores: E(): 1e-43, 39.22% id in 543 aa, and to Deinococcus radiodurans carboxypeptidase-related protein dr0964 SWALL:Q9RVQ8 (EMBL:AE001948) (500 aa) fasta scores: E(): 2.7e-31, 33.75% id in 480 aa. CDS contains an extended N-terminal region is comparison to orthologues; hypothetical protein 376064..377755 Burkholderia pseudomallei K96243 3092732 YP_106980.1 CDS BPSL0354 NC_006350.1 377828 378232 D Poor database matches. C-terminus is similar to the C-terminal region of Ralstonia solanacearum calcium binding signal peptide protein rsc3104 or rs00557 SWALL:Q8XUT1 (EMBL:AL646073) (194 aa) fasta scores: E(): 0.077, 39.47% id in 76 aa; hypothetical protein 377828..378232 Burkholderia pseudomallei K96243 3094087 YP_106981.1 CDS BPSL0355 NC_006350.1 378316 379317 D Similar to Ralstonia solanacearum ATP-sensitive inward rectifier potassium channel related transmembrane protein rsc0450 or rs04452 SWALL:Q8Y286 (EMBL:AL646059) (307 aa) fasta scores: E(): 1.6e-79, 71.08% id in 294 aa, and to Anabaena sp. hypothetical protein all0954 SWALL:Q8YY97 (EMBL:AP003584) (303 aa) fasta scores: E(): 1e-45, 43% id in 293 aa; inward rectifier potassium channel protein 378316..379317 Burkholderia pseudomallei K96243 3094088 YP_106982.1 CDS BPSL0356 NC_006350.1 379534 383109 D catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase 379534..383109 Burkholderia pseudomallei K96243 3094641 YP_106983.1 CDS BPSL0357 NC_006350.1 383345 385012 R Similar to Yersinia pestis na(+)/h(+) exchanger protein ypo3630 SWALL:Q8ZAZ9 (EMBL:AJ414158) (549 aa) fasta scores: E(): 4e-91, 50.18% id in 556 aa, and to Escherichia coli na(+)/h(+) exchanger protein YjcE SWALL:YJCE_ECOLI (SWALL:P32703) (549 aa) fasta scores: E(): 2.3e-90, 49.27% id in 550 aa; sodium/hydrogen exchanger family protein complement(383345..385012) Burkholderia pseudomallei K96243 3094642 YP_106984.1 CDS BPSL0358 NC_006350.1 385324 386613 D Weakly similar to Clostridium acetobutylicum sensory protein, containing EAL-domain cac0322 SWALL:Q97M76 (EMBL:AE007546) (412 aa) fasta scores: E(): 1.3e-16, 23.65% id in 389 aa. C-terminal region is similar to and to Rhizobium loti hypothetical protein mll2537 SWALL:Q98I70 (EMBL:AP002999) (282 aa) fasta scores: E(): 7.1e-18, 37.22% id in 231 aa; hypothetical protein 385324..386613 Burkholderia pseudomallei K96243 3093114 YP_106985.1 CDS BPSL0359 NC_006350.1 387068 387448 D Similar to the C-terminal region of Xanthomonas axonopodis hypothetical protein xac2194 SWALL:Q8PKH9 (EMBL:AE011856) (160 aa) fasta scores: E(): 3.3e-10, 38.65% id in 119 aa, and to the full length Brucella melitensis hypothetical membrane spanning protein bmei1195 SWALL:Q8YGG4 (EMBL:AE009558) (142 aa) fasta scores: E(): 5.7, 29.2% id in 113 aa; hypothetical protein 387068..387448 Burkholderia pseudomallei K96243 3093115 YP_106986.1 CDS BPSL0360 NC_006350.1 387744 389183 D Similar to an internal region of Homo sapiens alkaline phosphatase, placental type 1 precursor ALPP or PLAP SWALL:PPB1_HUMAN (SWALL:P05187) (535 aa) fasta scores: E(): 2e-16, 37.23% id in 470 aa, and to the full length Ralstonia solanacearum alkaline phosphatase lipoprotein transmembrane rsc0097 or rs02267 SWALL:Q8Y383 (EMBL:AL646057) (483 aa) fasta scores: E(): 2e-99, 63.03% id in 487 aa. Similar to BPSL0361, 56.639% identity (61.625% ungapped) in 482 aa overlap; alkaline phosphatase 387744..389183 Burkholderia pseudomallei K96243 3092645 YP_106987.1 CDS BPSL0361 NC_006350.1 389216 390619 D Similar to an internal region of Homo sapiens alkaline phosphatase, placental type 1 precursor ALPP or PLAP SWALL:PPB1_HUMAN (SWALL:P05187) (535 aa) fasta scores: E(): 2.7e-32, 35.45% id in 471 aa, and to the full length Ralstonia solanacearum alkaline phosphatase signal peptide protein rsc0098 or rs02280 SWALL:Q8Y382 (EMBL:AL646057) (467 aa) fasta scores: E(): 1.6e-98, 62.92% id in 472 aa. Similar to BPSL0360, 56.432% identity (61.400% ungapped) in 482 aa overlap; alkaline phosphatase 389216..390619 Burkholderia pseudomallei K96243 3092646 YP_106988.1 CDS BPSL0362 NC_006350.1 390649 391455 D Poor database matches. Similar to Ralstonia solanacearum signal peptide protein rsc0099 or rs02268 SWALL:Q8Y381 (EMBL:AL646057) (232 aa) fasta scores: E(): 0.0083, 35.54% id in 256 aa; hypothetical protein 390649..391455 Burkholderia pseudomallei K96243 3092474 YP_106989.1 CDS BPSL0363 NC_006350.1 391828 392541 D Similar to Escherichia coli copper homeostasis protein CutC SWALL:CUTC_ECOLI (SWALL:P46719) (248 aa) fasta scores: E(): 3.3e-17, 36.17% id in 235 aa, and to Caulobacter crescentus hypothetical protein CC2360 SWALL:Q9A5T7 (EMBL:AE005905) (245 aa) fasta scores: E(): 2e-21, 41.23% id in 211 aa; CutC family protein 391828..392541 Burkholderia pseudomallei K96243 3092475 YP_106990.1 CDS bioB NC_006350.1 392668 393687 R Similar to Escherichia coli biotin synthase BioB SWALL:BIOB_ECOLI (SWALL:P12996) (346 aa) fasta scores: E(): 5.2e-80, 61.58% id in 315 aa, and to Ralstonia solanacearum probable biotin synthase rsc0266 or rs03233 SWALL:Q8Y2R9 (EMBL:AL646058) (360 aa) fasta scores: E(): 1e-98, 74.37% id in 320 aa; biotin synthase complement(392668..393687) Burkholderia pseudomallei K96243 3094556 YP_106991.1 CDS bioD NC_006350.1 393751 394473 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(393751..394473) Burkholderia pseudomallei K96243 3093350 YP_106992.1 CDS bioF NC_006350.1 394470 395654 R catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase complement(394470..395654) Burkholderia pseudomallei K96243 3093351 YP_106993.1 CDS bioA NC_006350.1 395651 396997 R catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(395651..396997) Burkholderia pseudomallei K96243 3092139 YP_106994.1 CDS BPSL0368 NC_006350.1 397561 398844 R Internal region is similar to Ralstonia solanacearum hypothetical signal peptide protein rsc0268 or rs03235 SWALL:Q8Y2R7 (EMBL:AL646058) (308 aa) fasta scores: E(): 6.1e-43, 48.32% id in 269 aa, and weakly similar to Caulobacter crescentus hypothetical protein cc0087 SWALL:Q9ABY3 (EMBL:AE005683) (252 aa) fasta scores: E(): 0.00019, 30.08% id in 236 aa; peptidase complement(397561..398844) Burkholderia pseudomallei K96243 3091532 YP_106995.1 CDS BPSL0369 NC_006350.1 399073 399525 R Similar to Ralstonia solanacearum hypothetical protein rsc0270 or rs03237 SWALL:Q8Y2R5 (EMBL:AL646058) (144 aa) fasta scores: E(): 3.7e-25, 56.37% id in 149 aa, and to Xanthomonas campestris hypothetical protein xcc4159 SWALL:AAM43375 (EMBL:AE012541) (129 aa) fasta scores: E(): 3.1e-14, 48.57% id in 140 aa; hypothetical protein complement(399073..399525) Burkholderia pseudomallei K96243 3091533 YP_106996.1 CDS BPSL0370 NC_006350.1 399557 400234 R Similar to Ralstonia solanacearum hypothetical oxidoreductase rsc0275 or rs03242 SWALL:Q8Y2R0 (EMBL:AL646058) (236 aa) fasta scores: E(): 3.1e-41, 57.75% id in 232 aa. C-terminal region is similar to Myxococcus xanthus C-factor cell-cell signaling protein CsgA or SpoC SWALL:CSGA_MYXXA (SWALL:P21158) (166 aa) fasta scores: E(): 5.8e-11, 37.86% id in 169 aa; short chain dehydrogenase complement(399557..400234) Burkholderia pseudomallei K96243 3092742 YP_106997.1 CDS BPSL0371 NC_006350.1 400265 401458 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(400265..401458) Burkholderia pseudomallei K96243 3092743 YP_106998.1 CDS BPSL0372 NC_006350.1 401445 402215 R Similar to Ralstonia solanacearum probable carbonic anhydrase rsc0277 or rs03244 SWALL:Q8Y2Q8 (EMBL:AL646058) (226 aa) fasta scores: E(): 3.5e-55, 68.15% id in 201 aa, and to Xanthomonas axonopodis carbonic anhydrase xac1604 SWALL:AAM36472 (EMBL:AE011793) (220 aa) fasta scores: E(): 9.4e-54, 63.67% id in 212 aa. CDS is extended at the C-terminus in comparison to orthologues; carbonic anhydrase complement(401445..402215) Burkholderia pseudomallei K96243 3092418 YP_106999.1 CDS aceK NC_006350.1 402273 404084 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase complement(402273..404084) Burkholderia pseudomallei K96243 3092419 YP_107000.1 CDS BPSL0374 NC_006350.1 404374 405453 D Similar to Ralstonia solanacearum hypothetical protein rsc0281 or rs03248 SWALL:Q8Y2Q4 (EMBL:AL646058) (359 aa) fasta scores: E(): 4.5e-99, 65.45% id in 359 aa, and to Caulobacter crescentus metallo-beta-lactamase cc0395 SWALL:Q9AB39 (EMBL:AE005712) (317 aa) fasta scores: E(): 1.2e-40, 42.54% id in 322 aa. CDS is extended at the N-terminus in comparison to the C. crescentus protein; metallo-beta-lactamase superfamily protein 404374..405453 Burkholderia pseudomallei K96243 3093229 YP_107001.1 CDS BPSL0375 NC_006350.1 405732 407378 R Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa1425 SWALL:Q9I3R9 (EMBL:AE004572) (538 aa) fasta scores: E(): 4.1e-65, 45.23% id in 535 aa. Weakly similar to Staphylococcus epidermidis erythromycin resistance ATP-binding protein MsrA SWALL:MSRA_STAEP (SWALL:P23212) (488 aa) fasta scores: E(): 5e-11, 25.83% id in 542 aa; ABC transport system ATP-binding protein complement(405732..407378) Burkholderia pseudomallei K96243 3093230 YP_107002.1 CDS BPSL0376 NC_006350.1 407612 409198 R Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 2.1e-90, 43.59% id in 523 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC dipeptide transporter pa5317 SWALL:Q9HTN7 (EMBL:AE004944) (526 aa) fasta scores: E(): 8.9e-134, 63.51% id in 529 aa; ABC transporter substrate-binding protein complement(407612..409198) Burkholderia pseudomallei K96243 3092891 YP_107003.1 CDS BPSL0377 NC_006350.1 409296 409979 R Similar to the N-terminal regions of Ralstonia solanacearum probable acetyl-CoA acetyltransferase rsc0276 or rs03243 SWALL:Q8Y2Q9 (EMBL:AL646058) (393 aa) fasta scores: E(): 4.5e-14, 39.81% id in 211 aa, and Pseudomonas aeruginosa probable acyl-CoA thiolase pa2553 SWALL:Q9I0T1 (EMBL:AE004683) (396 aa) fasta scores: E(): 2e-12, 37.93% id in 203 aa; hypothetical protein complement(409296..409979) Burkholderia pseudomallei K96243 3092892 YP_107004.1 CDS BPSL0378 NC_006350.1 410175 410642 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1285 SWALL:Q9I459 (EMBL:AE004558) (149 aa) fasta scores: E(): 8.6e-12, 34.89% id in 149 aa, and to Agrobacterium tumefaciens transcriptional regulator, MarR family atu0852 or agr_c_1559 SWALL:Q8UH33 (EMBL:AE009052) (148 aa) fasta scores: E(): 5e-08, 33.33% id in 141 aa. Possible alternative translational start site; MarR family transcriptional regulator complement(410175..410642) Burkholderia pseudomallei K96243 3093026 YP_107005.1 CDS BPSL0379 NC_006350.1 410881 411594 D Similar to Streptomyces exfoliatus 20-beta-hydroxysteroid dehydrogenase SWALL:2BHD_STREX (SWALL:P19992) (255 aa) fasta scores: E(): 2.2e-09, 28.86% id in 246 aa, and to Streptomyces albus oxidoreductase homologue SitS SWALL:Q9RPT7 (EMBL:AF145724) (223 aa) fasta scores: E(): 6.8e-34, 49.33% id in 225 aa; short chain dehydrogenase 410881..411594 Burkholderia pseudomallei K96243 3093027 YP_107006.1 CDS BPSL0380 NC_006350.1 411739 412518 R Similar to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase rsc0284 or rs03251 SWALL:Q8Y2Q1 (EMBL:AL646058) (266 aa) fasta scores: E(): 6e-36, 62.64% id in 257 aa, and to Mycobacterium tuberculosis oxidoreductase rv0945 or mt0971 or MTCY10D7.29c SWALL:Y945_MYCTU (SWALL:P71564) (253 aa) fasta scores: E(): 4.9e-18, 34.28% id in 245 aa; short chain dehydrogenase complement(411739..412518) Burkholderia pseudomallei K96243 3092047 YP_107007.1 CDS dsbA NC_006350.1 412535 413173 R Similar to Burkholderia cepacia thiol:disulfide interchange protein DsbA SWALL:DSBA_BURCE (SWALL:Q9RHV8) (212 aa) fasta scores: E(): 5.7e-73, 87.73% id in 212 aa, and to Ralstonia solanacearum probable thiol:disulfide interchange signal peptide protein rsc0285 or rs03252 SWALL:Q8Y2Q0 (EMBL:AL646058) (218 aa) fasta scores: E(): 8e-39, 50.22% id in 221 aa; thiol:disulfide interchange protein complement(412535..413173) Burkholderia pseudomallei K96243 3093149 YP_107008.1 CDS BPSL0382 NC_006350.1 413225 414073 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0286 or rs03253 SWALL:Q8Y2P9 (EMBL:AL646058) (238 aa) fasta scores: E(): 3.5e-09, 40.9% id in 286 aa, and to Xanthomonas campestris hypothetical protein xcc3862 SWALL:AAM43093 (EMBL:AE012507) (286 aa) fasta scores: E(): 1.5e-06, 30.61% id in 294 aa; hypothetical protein complement(413225..414073) Burkholderia pseudomallei K96243 3092048 YP_107009.1 CDS argS NC_006350.1 414152 415936 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(414152..415936) Burkholderia pseudomallei K96243 3093875 YP_107010.1 CDS BPSL0384 NC_006350.1 416139 416462 D Similar to Ralstonia solanacearum hypothetical protein rsc0288 or rs03255 SWALL:Q8Y2P7 (EMBL:AL646058) (105 aa) fasta scores: E(): 3.5e-11, 42.72% id in 110 aa; hypothetical protein 416139..416462 Burkholderia pseudomallei K96243 3092817 YP_107011.1 CDS metH1 NC_006350.1 416706 419408 R Similar to Ralstonia solanacearum probable 5-methyltetrahydrofolate--homocysteine methyltransferase rsc0294 or rs03261 SWALL:Q8Y2P1 (EMBL:AL646058) (905 aa) fasta scores: E(): 0, 83.75% id in 905 aa, and to the C-terminal region of Escherichia coli 5-methyltetrahydrofolate--homocysteine methyltransferase MetH SWALL:METH_ECOLI (SWALL:P13009) (1226 aa) fasta scores: E(): 1.7e-129, 62.72% id in 904 aa. BPSL0385 and BPSL03856 are similar to the N- and C-terminal regions of many 5-methyltetrahydrofolate--homocysteine methyltransferases. In some organisms these two domains are also found as separate coding sequences. Effect on the function of CDSs is not known; 5-methyltetrahydrofolate--homocysteine methyltransferase complement(416706..419408) Burkholderia pseudomallei K96243 3091951 YP_107012.1 CDS metH2 NC_006350.1 419469 420548 R Similar to Ralstonia solanacearum probable 5-methyltetrahydrofolate--homocysteine methyltransferase rsc0295 or rs03262 SWALL:Q8Y2P0 (EMBL:AL646058) (346 aa) fasta scores: E(): 2.9e-107, 80.29% id in 345 aa, and to the N-terminal region Escherichia coli 5-methyltetrahydrofolate--homocysteine methyltransferase MetH SWALL:METH_ECOLI (SWALL:P13009) (1226 aa) fasta scores: E(): 3.2e-72, 59.07% id in 325 aa. BPSL0385 and BPSL03856 are similar to the N- and C-terminal regions of many 5-methyltetrahydrofolate--homocysteine methyltransferases. In some organisms these two domains are also found as separate coding sequences. Effect on the function of CDSs is not known; 5-methyltetrahydrofolate--homocysteine methyltransferase complement(419469..420548) Burkholderia pseudomallei K96243 3093220 YP_107013.1 CDS BPSL0387 NC_006350.1 420737 420994 R Similar to Ralstonia solanacearum hypothetical protein rsc0297 or rs03264 SWALL:Q8Y2N8 (EMBL:AL646058) (85 aa) fasta scores: E(): 7.8e-19, 68.6% id in 86 aa. Possible alternative translational start sites; hypothetical protein complement(420737..420994) Burkholderia pseudomallei K96243 3092818 YP_107014.1 CDS BPSL0388 NC_006350.1 421177 422445 R Similar to Ralstonia solanacearum prolin-rich signal peptide protein rsc0299 or rs03266 SWALL:Q8Y2N6 (EMBL:AL646058) (355 aa) fasta scores: E(): 3e-17, 42.35% id in 366 aa; hypothetical protein complement(421177..422445) Burkholderia pseudomallei K96243 3093932 YP_107015.1 CDS BPSL0389 NC_006350.1 422575 423438 R Similar to Streptomyces coelicolor glycerol operon regulatory protein GylR SWALL:GYLR_STRCO (SWALL:P15360) (254 aa) fasta scores: E(): 8e-11, 32.04% id in 259 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0300 or rs03267 SWALL:Q8Y2N5 (EMBL:AL646058) (290 aa) fasta scores: E(): 1.6e-52, 55% id in 280 aa. CDS is extended at the N-terminus in comparison to S coelicolor protein; IclR family transcriptional regulator complement(422575..423438) Burkholderia pseudomallei K96243 3093933 YP_107016.1 CDS BPSL0390 NC_006350.1 423548 424540 D Similar to Ralstonia solanacearum hypothetical protein rsc0301 or rs03268 SWALL:Q8Y2N4 (EMBL:AL646058) (330 aa) fasta scores: E(): 5.7e-101, 76.22% id in 328 aa, and to Xanthomonas campestris dioxygenase xcc0591 SWALL:AAM39907 (EMBL:AF204145) (329 aa) fasta scores: E(): 6e-75, 60.99% id in 323 aa; fumarylacetoacetate (FAA) hydrolase 423548..424540 Burkholderia pseudomallei K96243 3092780 YP_107017.1 CDS BPSL0391 NC_006350.1 424759 425586 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 424759..425586 Burkholderia pseudomallei K96243 3092781 YP_107018.1 CDS BPSL0392 NC_006350.1 425676 426467 D Poor database matches. similar to Ralstonia solanacearum hypothetical protein rsc0305 or rs03272 SWALL:Q8Y2N0 (EMBL:AL646058) (294 aa) fasta scores: E(): 3.2e-07, 37.15% id in 288 aa. C-terminus is similar to the C-terminal region of Pseudomonas aeruginosa polyhydroxyalkanoate synthesis protein pa5060 SWALL:Q9HUC3 (EMBL:AE004919) (309 aa) fasta scores: E(): 0.011, 33.95% id in 215 aa; hypothetical protein 425676..426467 Burkholderia pseudomallei K96243 3091454 YP_107019.1 CDS BPSL0393 NC_006350.1 426504 427748 D Similar to Ralstonia solanacearum hypothetical protein rsc0306 or rs03273 SWALL:Q8Y2M9 (EMBL:AL646058) (391 aa) fasta scores: E(): 2.6e-77, 53.66% id in 382 aa, and to Pseudomonas aeruginosa hypothetical protein pa3241 SWALL:Q9HYZ9 (EMBL:AE004747) (389 aa) fasta scores: E(): 9.9e-52, 42.33% id in 385 aa; patatin-like phospholipase 426504..427748 Burkholderia pseudomallei K96243 3091455 YP_107020.1 CDS BPSL0394 NC_006350.1 428396 429271 D Similar to Burkholderia cepacia hypothetical protein SWALL:Q9ZGQ4 (EMBL:AF076477) (283 aa) fasta scores: E(): 7e-108, 92.72% id in 275 aa, and to Ralstonia solanacearum hypothetical protein rsc0308 or rs03275 SWALL:Q8Y2M7 (EMBL:AL646058) (289 aa) fasta scores: E(): 1.1e-102, 84.08% id in 289 aa; hypothetical protein 428396..429271 Burkholderia pseudomallei K96243 3093845 YP_107021.1 CDS BPSL0395 NC_006350.1 429412 429897 D Similar to Alcaligenes eutrophus protein required for both lithoautotrophic (hydrogen plus carbon dioxide) and organoautotrophic (formate) growth Aut SWALL:Q43999 (EMBL:U07639) (164 aa) fasta scores: E(): 5.4e-39, 69.32% id in 163 aa, and to Ralstonia solanacearum transferase rsc0309 or rs03276 SWALL:Q8Y2M6 (EMBL:AL646058) (166 aa) fasta scores: E(): 8.9e-40, 70.18% id in 161 aa; cytidylyltransferase 429412..429897 Burkholderia pseudomallei K96243 3093846 YP_107022.1 CDS BPSL0396 NC_006350.1 429943 430365 R hypothetical protein complement(429943..430365) Burkholderia pseudomallei K96243 3092275 YP_107023.1 CDS BPSL0397 NC_006350.1 430475 431254 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(430475..431254) Burkholderia pseudomallei K96243 3092276 YP_107024.1 CDS BPSL0398 NC_006350.1 431251 432210 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(431251..432210) Burkholderia pseudomallei K96243 3093583 YP_107025.1 CDS BPSL0399 NC_006350.1 432591 433478 R Similar to Ralstonia solanacearum hypothetical protein rsc3362 or rs02637 SWALL:Q8XU32 (EMBL:AL646074) (276 aa) fasta scores: E(): 2.6e-50, 63.32% id in 259 aa; hypothetical protein complement(432591..433478) Burkholderia pseudomallei K96243 3093584 YP_107026.1 CDS cpdB NC_006350.1 433552 435612 R Similar to Escherichia coli 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor CpdB SWALL:CN16_ECOLI (SWALL:P08331) (647 aa) fasta scores: E(): 3.5e-61, 43.32% id in 674 aa, and to Ralstonia solanacearum probable 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor transmembrane protein rsc3363 or rs02638 SWALL:Q8XU31 (EMBL:AL646074) (681 aa) fasta scores: E(): 5.9e-215, 81.63% id in 675 aa; 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(433552..435612) Burkholderia pseudomallei K96243 3091766 YP_107027.1 CDS BPSL0401 NC_006350.1 435878 437002 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0313 or rs03280 SWALL:Q8Y2M2 (EMBL:AL646058) (374 aa) fasta scores: E(): 5.2e-80, 60.81% id in 370 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa3211 SWALL:Q9HZ29 (EMBL:AE004744) (381 aa) fasta scores: E(): 2.4e-33, 35.67% id in 384 aa; hypothetical protein 435878..437002 Burkholderia pseudomallei K96243 3094331 YP_107028.1 CDS BPSL0402 NC_006350.1 436999 437841 D Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0314 or rs03281 SWALL:Q8Y2M1 (EMBL:AL646058) (298 aa) fasta scores: E(): 5.7e-54, 61.97% id in 263 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa3212 SWALL:Q9HZ28 (EMBL:AE004744) (264 aa) fasta scores: E(): 8.9e-44, 52.29% id in 262 aa. CDS is truncated at the N-terminus in comparison to some orthologue; ABC transporter ATP-binding protein 436999..437841 Burkholderia pseudomallei K96243 3094332 YP_107029.1 CDS BPSL0403 NC_006350.1 437865 438794 D Similar to Ralstonia solanacearum probable signal peptide protein rsc0315 or rs03282 SWALL:Q8Y2M0 (EMBL:AL646058) (330 aa) fasta scores: E(): 3.9e-31, 44.86% id in 321 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3213 pa3213 SWALL:Q9HZ27 (EMBL:AE004744) (312 aa) fasta scores: E(): 5.7e-10, 25.9% id in 305 aa; mce-like protein 437865..438794 Burkholderia pseudomallei K96243 3092402 YP_107030.1 CDS BPSL0404 NC_006350.1 438828 439451 D Similar to Ralstonia solanacearum probable lipoprotein rsc0316 or rs03283 SWALL:Q8Y2L9 (EMBL:AL646058) (211 aa) fasta scores: E(): 1.2e-17, 38.3% id in 201 aa, and to Pseudomonas aeruginosa hypothetical protein pa3214 SWALL:Q9HZ26 (EMBL:AE004744) (214 aa) fasta scores: E(): 2.2e-05, 28.15% id in 206 aa; lipoprotein 438828..439451 Burkholderia pseudomallei K96243 3092403 YP_107031.1 CDS BPSL0405 NC_006350.1 439483 440694 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0317 or rs03284 SWALL:Q8Y2L8 (EMBL:AL646058) (408 aa) fasta scores: E(): 2.6e-53, 44.02% id in 393 aa; hypothetical protein 439483..440694 Burkholderia pseudomallei K96243 3092793 YP_107032.1 CDS BPSL0406 NC_006350.1 440800 441129 D Similar to Clostridium pasteurianum ferredoxin, 2Fe-2S SWALL:FER2_CLOPA (SWALL:P07324) (102 aa) fasta scores: E(): 7.4e-13, 42% id in 100 aa, and to Ralstonia solanacearum ferredoxin 2Fe-2S protein rsc0329 or rs03296 SWALL:Q8Y2K6 (EMBL:AL646058) (108 aa) fasta scores: E(): 3.7e-27, 65.71% id in 105 aa; ferredoxin 440800..441129 Burkholderia pseudomallei K96243 3092794 YP_107033.1 CDS BPSL0407 NC_006350.1 441177 441821 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0328 or rs03295 SWALL:Q8Y2K7 (EMBL:AL646058) (215 aa) fasta scores: E(): 7.7e-54, 66.35% id in 217 aa, and to Neisseria meningitidis hypothetical protein nma1086 SWALL:Q9JUY1 (EMBL:AL162755) (213 aa) fasta scores: E(): 9.5e-22, 39.23% id in 209 aa; hypothetical protein 441177..441821 Burkholderia pseudomallei K96243 3091692 YP_107034.1 CDS BPSL0408 NC_006350.1 442663 443874 D Similar to Escherichia coli penicillin-binding protein 6 precursor DacC SWALL:DACC_ECOLI (SWALL:P08506) (400 aa) fasta scores: E(): 5.8e-48, 42.21% id in 379 aa, and to Ralstonia solanacearum probable penicillin-binding rsc0327 or rs03294 SWALL:Q8Y2K8 (EMBL:AL646058) (397 aa) fasta scores: E(): 1.8e-79, 58.8% id in 403 aa; penicillin-binding protein 6 442663..443874 Burkholderia pseudomallei K96243 3091693 YP_107035.1 CDS BPSL0409 NC_006350.1 443964 444911 D Similar to Bacillus licheniformis D-alanine aminotransferase Dat SWALL:DAAA_BACLI (SWALL:P54692) (283 aa) fasta scores: E(): 8.7e-28, 40.42% id in 282 aa, and to Listeria innocua D-alanine aminotransferase lin1660 SWALL:DAAA_LISIN (SWALL:Q92B90) (289 aa) fasta scores: E(): 1.8e-27, 36.74% id in 283 aa; D-amino acid aminotransferase 443964..444911 Burkholderia pseudomallei K96243 3091605 YP_107036.1 CDS BPSL0410 NC_006350.1 444908 445216 D Similar to Ralstonia solanacearum hypothetical protein rsc0326 or rs03293 SWALL:Q8Y2K9 (EMBL:AL646058) (97 aa) fasta scores: E(): 4.2e-17, 53.92% id in 102 aa, and to Neisseria meningitidis hypothetical protein nma1380 or nmb1218 SWALL:Q9JRI4 (EMBL:AL162755) (91 aa) fasta scores: E(): 3.9e-15, 54.11% id in 85 aa; hypothetical protein 444908..445216 Burkholderia pseudomallei K96243 3091606 YP_107037.1 CDS BPSL0411 NC_006350.1 445227 446192 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(445227..446192) Burkholderia pseudomallei K96243 3092092 YP_107038.1 CDS BPSL0412 NC_006350.1 446293 446619 D Poor database matches. Weakly similar to Ralstonia solanacearum hypothetical protein rsc0324 or rs03291 SWALL:Q8Y2L1 (EMBL:AL646058) (119 aa) fasta scores: E(): 0.0043, 29.35% id in 109 aa; hypothetical protein 446293..446619 Burkholderia pseudomallei K96243 3092093 YP_107039.2 CDS lipB NC_006350.1 446688 447452 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 446688..447452 Burkholderia pseudomallei K96243 3091586 YP_107040.1 CDS lipA NC_006350.1 447445 448434 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 447445..448434 Burkholderia pseudomallei K96243 3091431 YP_107041.1 CDS BPSL0416 NC_006350.1 449010 450893 R Similar to Bacillus subtilis gamma-glutamyltranspeptidase precursor Ggt SWALL:GGT_BACSU (SWALL:P54422) (587 aa) fasta scores: E(): 9.3e-32, 34.66% id in 600 aa, and to Ralstonia solanacearum probable gamma-glutamyltranspeptidase precursor protein rsc2921 or rs00172 SWALL:Q8XVB0 (EMBL:AL646072) (623 aa) fasta scores: E(): 8.5e-98, 54.25% id in 599 aa; hypothetical protein complement(449010..450893) Burkholderia pseudomallei K96243 3091829 YP_107042.1 CDS BPSL0417 NC_006350.1 451783 452124 D Poor database matches. Similar to the C-terminal region of Caulobacter crescentus hypothetical protein cc1436 SWALL:Q9A8B8 (EMBL:AE005818) (314 aa) fasta scores: E(): 1.9, 31.57% id in 114 aa; hypothetical protein 451783..452124 Burkholderia pseudomallei K96243 3093255 YP_107043.1 CDS BPSL0418 NC_006350.1 452345 453247 R Similar to Rhizobium loti transcriptional regulator mlr2977 SWALL:Q98H90 (EMBL:AP003000) (299 aa) fasta scores: E(): 3.2e-24, 32.88% id in 298 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 9e-24, 29.83% id in 295 aa; LysR family transcriptional regulator complement(452345..453247) Burkholderia pseudomallei K96243 3093256 YP_107044.1 CDS BPSL0419 NC_006350.1 453402 455528 D Similar to Cavia porcellus peroxisomal bifunctional enzyme [includes: enoyl-CoA hydratase; 3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase] EHHADH SWALL:ECHP_CAVPO (SWALL:P55100) (725 aa) fasta scores: E(): 2.1e-66, 40.82% id in 703 aa, and to Rhizobium loti enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase mll4199 SWALL:Q98EK7 (EMBL:AP003003) (689 aa) fasta scores: E(): 1.1e-111, 50.14% id in 698 aa; trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase 453402..455528 Burkholderia pseudomallei K96243 3093098 YP_107045.1 CDS BPSL0420 NC_006350.1 455583 456791 D Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc2045 or rs03610 SWALL:Q8XXR8 (EMBL:AL646068) (398 aa) fasta scores: E(): 3.9e-95, 59.2% id in 402 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase cc1310 SWALL:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 9.4e-81, 49.87% id in 407 aa. Similar to BPSL1228, 58.209% identity (58.794% ungapped) in 402 aa overlap; hypothetical protein 455583..456791 Burkholderia pseudomallei K96243 3093099 YP_107046.1 CDS BPSL0421 NC_006350.1 456801 457931 D Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc2044 or rs03609 SWALL:Q8XXR9 (EMBL:AL646068) (376 aa) fasta scores: E(): 9e-59, 49.06% id in 373 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase cc1807 SWALL:Q9A7B7 (EMBL:AE005855) (382 aa) fasta scores: E(): 1.7e-42, 38.68% id in 380 aa; hypothetical protein 456801..457931 Burkholderia pseudomallei K96243 3091731 YP_107047.1 CDS BPSL0422 NC_006350.1 457957 459162 D Similar to Rhizobium meliloti conserved membrane-anchored protein rb0848 or smb21182 SWALL:Q92V66 (EMBL:AL603645) (394 aa) fasta scores: E(): 1.7e-62, 44.33% id in 388 aa, and to Sphingomonas aromaticivorans hypothetical protein ORF1338 SWALL:O86014 (EMBL:AF079317) (388 aa) fasta scores: E(): 1.9e-57, 44.74% id in 371 aa; CAIB/BAIF family protein 457957..459162 Burkholderia pseudomallei K96243 3091732 YP_107048.1 CDS BPSL0423 NC_006350.1 459603 459908 D Similar to Salmonella typhi membrane protein sty4472 SWALL:Q8Z1R1 (EMBL:AL627282) (104 aa) fasta scores: E(): 5.9e-10, 36.36% id in 99 aa, and to Salmonella typhimurium inner membrane protein stm4274 SWALL:Q8ZKF7 (EMBL:AE008900) (104 aa) fasta scores: E(): 5.9e-10, 36.36% id in 99 aa; hypothetical protein 459603..459908 Burkholderia pseudomallei K96243 3091996 YP_107049.1 CDS actP NC_006350.1 459920 461635 D member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 459920..461635 Burkholderia pseudomallei K96243 3091997 YP_107050.1 CDS dctA NC_006350.1 462003 463289 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 462003..463289 Burkholderia pseudomallei K96243 3094703 YP_107051.1 CDS dctB NC_006350.1 463292 465325 D Possible alternative translational start site. Similar to Rhizobium leguminosarum C4-dicarboxylate transport sensor protein DctB SWALL:DCTB_RHILE (SWALL:P10047) (622 aa) fasta scores: E(): 8.5e-47, 37.99% id in 629 aa, and to Ralstonia solanacearum probable C4-dicarboxylate transport sensor kinase transcription regulator protein rsc0331 or rs03298 SWALL:Q8Y2K4 (EMBL:AL646058) (665 aa) fasta scores: E(): 5.9e-57, 55.17% id in 667 aa; C4-dicarboxylate transport sensor protein 463292..465325 Burkholderia pseudomallei K96243 3094345 YP_107052.1 CDS dctD NC_006350.1 465374 466729 D Similar to Rhizobium meliloti C4-dicarboxylate transport transcriptional regulatory protein DctD SWALL:DCTD_RHIME (SWALL:P13632) (460 aa) fasta scores: E(): 7.2e-76, 49.23% id in 455 aa, and to Ralstonia solanacearum probable C4-dicarboxylate transport response regulator transcription regulator protein rsc0332 or rs03299 SWALL:Q8Y2K3 (EMBL:AL646058) (438 aa) fasta scores: E(): 4.8e-109, 69.81% id in 444 aa. Similar to BPSS0063, 52.715% identity (54.312% ungapped) in 442 aa overlap; C4-dicarboxylate transport transcriptional regulatory protein 465374..466729 Burkholderia pseudomallei K96243 3091579 YP_107053.1 CDS BPSL0428 NC_006350.1 466845 467381 R Similar to Neisseria meningitidis periplasmic protein nma0493 SWALL:Q9JW89 (EMBL:AL162753) (162 aa) fasta scores: E(): 2.8e-17, 41.4% id in 157 aa, and to the C-terminal region of Ralstonia solanacearum transmembrane protein rsc0333 or rs03300 SWALL:Q8Y2K2 (EMBL:AL646058) (213 aa) fasta scores: E(): 5.4e-38, 60.77% id in 181 aa; hypothetical protein complement(466845..467381) Burkholderia pseudomallei K96243 3093439 YP_107054.1 CDS BPSL0429 NC_006350.1 467674 468264 D Similar to Ralstonia solanacearum transmembrane protein rsc0335 or rs03302 SWALL:Q8Y2K0 (EMBL:AL646058) (189 aa) fasta scores: E(): 1.2e-11, 36.86% id in 198 aa; hypothetical protein 467674..468264 Burkholderia pseudomallei K96243 3093440 YP_107055.1 CDS BPSL0430 NC_006350.1 468950 469729 R Similar to Anabaena sp. hypothetical protein ALR2045 SWALL:Q8YVD3 (EMBL:AP003588) (253 aa) fasta scores: E(): 3.7e-19, 33.64% id in 214 aa, and to Pseudomonas fluorescens thioesterase PltG SWALL:Q9X3R5 (EMBL:AF081920) (260 aa) fasta scores: E(): 4.6e-18, 31.07% id in 251 aa; thioesterase complement(468950..469729) Burkholderia pseudomallei K96243 3092430 YP_107056.1 CDS BPSL0431 NC_006350.1 470210 470674 D Similar to Vibrio cholerae hypothetical protein vca0382 SWALL:Q9KMH2 (EMBL:AE004374) (141 aa) fasta scores: E(): 4.6e-16, 42.06% id in 126 aa, and to Methanobacterium thermoautotrophicum N-terminal acetyltransferase complex, subunit Ard1 MTH999 SWALL:O27080 (EMBL:AE000872) (156 aa) fasta scores: E(): 0.0022, 31.46% id in 143 aa; acetyltransferase (GNAT) family protein 470210..470674 Burkholderia pseudomallei K96243 3092431 YP_107057.1 CDS BPSL0432 NC_006350.1 471119 472705 R Similar to Haemophilus influenzae competence protein ComM SWALL:COMM_HAEIN (SWALL:P45049) (509 aa) fasta scores: E(): 2.5e-43, 47.03% id in 523 aa, and to Ralstonia solanacearum probable mg(2+) chelatase rsc0338 or rs03305 SWALL:Q8Y2J7 (EMBL:AL646058) (510 aa) fasta scores: E(): 3.2e-67, 63.55% id in 524 aa; magnesium chelatase subunit complement(471119..472705) Burkholderia pseudomallei K96243 3092499 YP_107058.1 CDS BPSL0433 NC_006350.1 472843 473094 R Similar to Ralstonia solanacearum hypothetical protein rsc0340 or rs03307 SWALL:Q8Y2J5 (EMBL:AL646058) (87 aa) fasta scores: E(): 1.8e-15, 69.73% id in 76 aa, and to Pseudomonas aeruginosa hypothetical protein pa5289 SWALL:Q9HTR5 (EMBL:AE004941) (86 aa) fasta scores: E(): 1.5e-07, 50.61% id in 81 aa; hypothetical protein complement(472843..473094) Burkholderia pseudomallei K96243 3092500 YP_107059.1 CDS glnB1 NC_006350.1 473463 473801 D Similar to Klebsiella pneumoniae nitrogen regulatory protein P-II GlnB SWALL:GLNB_KLEPN (SWALL:P11671) (112 aa) fasta scores: E(): 2.2e-26, 70.53% id in 112 aa, and to Ralstonia solanacearum probable nitrogen regulatory P-II transcription regulator protein rsc0342 or rs06099 SWALL:Q8Y2J3 (EMBL:AL646058) (112 aa) fasta scores: E(): 1.1e-32, 84.82% id in 112 aa. Similar to BPSL1027, 75.000% identity (75.000% ungapped) in 112 aa overlap; nitrogen regulatory protein P-II 1 473463..473801 Burkholderia pseudomallei K96243 3093665 YP_107060.1 CDS BPSL0435 NC_006350.1 473849 475336 D C-terminal region is similar to Bacillus subtilis probable ammonium transporter NrgA SWALL:NRGA_BACSU (SWALL:Q07429) (404 aa) fasta scores: E(): 7.4e-39, 50.61% id in 407 aa. Similar to Xanthomonas axonopodis ammonium transporter xac0206 SWALL:Q9RBJ9 (EMBL:AE011645) (491 aa) fasta scores: E(): 2.1e-60, 52.12% id in 470 aa. CDS is extended at the N-terminus in comparison to orthologues. N-terminus of the CDS contains an alanine rich region. Possible alternative translational start site; ammonium transporter family protein 473849..475336 Burkholderia pseudomallei K96243 3094448 YP_107061.1 CDS gshA NC_006350.1 475712 477040 D Similar to Thiobacillus ferrooxidans glutamate--cysteine ligase GshA SWALL:Q56277 (EMBL:U81808) (436 aa) fasta scores: E(): 3.8e-78, 50.59% id in 419 aa, and to Ralstonia solanacearum hypothetical protein rsc0344 or rs03311 SWALL:Q8Y2J1 (EMBL:AL646058) (431 aa) fasta scores: E(): 2e-125, 71.86% id in 430 aa; glutamate--cysteine ligase 475712..477040 Burkholderia pseudomallei K96243 3093803 YP_107062.1 CDS gshB NC_006350.1 477068 478024 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 477068..478024 Burkholderia pseudomallei K96243 3093804 YP_107063.1 CDS BPSL0438 NC_006350.1 478197 478670 D Similar to the N-terminal region of Escherichia coli PTS system, mannose-specific IIab component ManX or PtsL or GptB SWALL:PTNA_ECOLI (SWALL:P08186) (322 aa) fasta scores: E(): 0.00046, 32.46% id in 154 aa, and to the full length Ralstonia solanacearum hypothetical protein rsc0346 or rs03313 SWALL:Q8Y2J0 (EMBL:AL646058) (169 aa) fasta scores: E(): 1.2e-23, 63.28% id in 128 aa. CDS is truncated at the N-terminus in comparison to the R. solanacearum protein, but is a similar length to other orthologues; sugar transport PTS system IIA component 478197..478670 Burkholderia pseudomallei K96243 3094449 YP_107064.1 CDS ptsH NC_006350.1 478747 479016 D Similar to Escherichia coli Salmonella typhimurium, and Salmonella typhi phosphocarrier protein HPr or PtsH SWALL:PTHP_ECOLI (SWALL:P07006) (85 aa) fasta scores: E(): 3.2e-08, 40.96% id in 83 aa, and to Alcaligenes eutrophus phosphocarrier protein hpr phbH SWALL:PTHP_ALCEU (SWALL:P23537) (89 aa) fasta scores: E(): 2.8e-26, 79.77% id in 89 aa; phosphocarrier protein HPr 478747..479016 Burkholderia pseudomallei K96243 3094543 YP_107065.1 CDS BPSL0440 NC_006350.1 479212 480984 D Similar to Escherichia coli phosphoenolpyruvate-protein phosphotransferase PtsI SWALL:PT1_ECOLI (SWALL:P08839) (575 aa) fasta scores: E(): 1.3e-68, 38.17% id in 571 aa, and to Ralstonia solanacearum probable phosphoenolpyruvate-protein phosphotransferase transmembrane rsc0348 or rs03315 SWALL:Q8Y2I8 (EMBL:AL646058) (586 aa) fasta scores: E(): 1.5e-149, 69.62% id in 586 aa; phosphoenolpyruvate-protein phosphotransferase 479212..480984 Burkholderia pseudomallei K96243 3091621 YP_107066.1 CDS BPSL0441 NC_006350.1 481272 482030 R ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB complement(481272..482030) Burkholderia pseudomallei K96243 3091622 YP_107067.1 CDS BPSL0442 NC_006350.1 482135 483709 R Similar to Ralstonia solanacearum carboxy-terminal processing protease transmembrane protein rsc0352 or rs03319 SWALL:Q8Y2I4 (EMBL:AL646058) (549 aa) fasta scores: E(): 6.1e-118, 66.91% id in 535 aa. C-terminus is similar to the C-terminal region of Bartonella bacilliformis carboxy-terminal processing protease precursor CtpA SWALL:CTPA_BARBA (SWALL:Q44879) (434 aa) fasta scores: E(): 6.4e-30, 45.18% id in 374 aa; C-terminal processing protease-3 complement(482135..483709) Burkholderia pseudomallei K96243 3092719 YP_107068.1 CDS gpmA NC_006350.1 483930 484679 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(483930..484679) Burkholderia pseudomallei K96243 3093540 YP_107069.1 CDS BPSL0444 NC_006350.1 484813 485220 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0354 or rs03321 SWALL:Q8Y2I2 (EMBL:AL646058) (151 aa) fasta scores: E(): 8.6e-30, 60.14% id in 138 aa, and to Xanthomonas axonopodis hypothetical protein xac0220 SWALL:AAM35112 (EMBL:AE011647) (144 aa) fasta scores: E(): 3.2e-14, 40.94% id in 127 aa; hypothetical protein 484813..485220 Burkholderia pseudomallei K96243 3092720 YP_107070.1 CDS grxC NC_006350.1 485232 485492 D Similar to Escherichia coli glutaredoxin 3 GrxC SWALL:GLR3_ECOLI (SWALL:P37687) (82 aa) fasta scores: E(): 1.6e-11, 48.14% id in 81 aa, and to Ralstonia solanacearum probable glutaredoxin 3 rsc0355 or rs03322 SWALL:Q8Y2I1 (EMBL:AL646058) (85 aa) fasta scores: E(): 1.3e-23, 75.29% id in 85 aa; glutaredoxin 3 485232..485492 Burkholderia pseudomallei K96243 3094582 YP_107071.1 CDS secB NC_006350.1 485609 486088 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 485609..486088 Burkholderia pseudomallei K96243 3091642 YP_107072.1 CDS gpsA NC_006350.1 486114 487112 D [NAD(P)+]; catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 486114..487112 Burkholderia pseudomallei K96243 3094482 YP_107073.1 CDS BPSL0448 NC_006350.1 487265 487798 D Similar to Chlorobium tepidum histone macro-H2A1-related protein ct2219 SWALL:AAM73435 (EMBL:AE012967) (172 aa) fasta scores: E(): 1.9e-36, 63.25% id in 166 aa, and to Pseudomonas aeruginosa hypothetical protein pa3693 SWALL:Y0J3_PSEAE (SWALL:Q9HXU7) (173 aa) fasta scores: E(): 5.6e-34, 63.75% id in 160 aa; Appr-1-p processing enzyme family protein 487265..487798 Burkholderia pseudomallei K96243 3092510 YP_107074.1 CDS BPSL0449 NC_006350.1 488218 488688 R Similar to Ralstonia solanacearum tRNA/rRNA methyltransferase rsc0358 or rs03326 SWALL:Q8Y2H8 (EMBL:AL646058) (156 aa) fasta scores: E(): 1.2e-49, 78.84% id in 156 aa, and to Neisseria meningitidis RNA methyltransferase, TrmH family nmb0268 SWALL:Q9K199 (EMBL:AE002383) (154 aa) fasta scores: E(): 2.4e-37, 60% id in 155 aa; SpoU rRNA methylase complement(488218..488688) Burkholderia pseudomallei K96243 3092511 YP_107075.1 CDS BPSL0450 NC_006350.1 488744 489472 R Similar to Haemophilus influenzae competence protein F Comf SWALL:COMF_HAEIN (SWALL:P31773) (229 aa) fasta scores: E(): 5e-10, 30.31% id in 221 aa, and to Ralstonia solanacearum competence protein F-related protein rsc0359 or rs03327 SWALL:Q8Y2H7 (EMBL:AL646058) (240 aa) fasta scores: E(): 4.8e-28, 47.52% id in 242 aa; hypothetical protein complement(488744..489472) Burkholderia pseudomallei K96243 3093817 YP_107076.1 CDS BPSL0451 NC_006350.1 489595 490560 D Similar to the C-terminal region of Ralstonia solanacearum biotin synthesis protein rsc0360 or rs03328 SWALL:Q8Y2H6 (EMBL:AL646058) (367 aa) fasta scores: E(): 4.4e-51, 50.31% id in 320 aa, and to the full length Xanthomonas campestris biotin synthesis protein xcc0383 SWALL:AAM39702 (EMBL:AE012134) (294 aa) fasta scores: E(): 4.6e-16, 37.84% id in 288 aa. Weakly similar to Escherichia coli biotin synthesis protein BioC SWALL:BIOC_ECOLI (SWALL:P12999) (251 aa) fasta scores: E(): 0.0089, 26.56% id in 271 aa; hypothetical protein 489595..490560 Burkholderia pseudomallei K96243 3093818 YP_107077.1 CDS BPSL0452 NC_006350.1 490758 491273 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0361 or rs03329 SWALL:Q8Y2H5 (EMBL:AL646058) (171 aa) fasta scores: E(): 3.2e-21, 45.39% id in 163 aa, and to Brucella melitensis hypothetical membrane spanning protein bmei1783 SWALL:Q8YEU4 (EMBL:AE009611) (179 aa) fasta scores: E(): 0.00072, 25.56% id in 176 aa; hypothetical protein 490758..491273 Burkholderia pseudomallei K96243 3092265 YP_107078.1 CDS BPSL0453 NC_006350.1 491323 492900 D No significant database matches to the full length CDS. N-terminal region is similar to Paracoccus denitrificans cytochrome c oxidase polypeptide II precursor CtaC or CtaB or CoiI SWALL:COX2_PARDE (SWALL:P08306) (298 aa) fasta scores: E(): 1.2e-27, 34.84% id in 287 aa, and Pseudomonas aeruginosa cytochrome c oxidase, subunit II pa0105 SWALL:Q9I727 (EMBL:AE004449) (374 aa) fasta scores: E(): 9.4e-60, 48.54% id in 344 aa; cytochrome c oxidase 491323..492900 Burkholderia pseudomallei K96243 3092266 YP_107079.1 CDS ctaD NC_006350.1 492944 494551 D Similar to Bradyrhizobium japonicum cytochrome c oxidase polypeptide I CtaD or CoxA SWALL:COX1_BRAJA (SWALL:P31833) (541 aa) fasta scores: E(): 2.6e-121, 55.88% id in 544 aa, and to Ralstonia solanacearum probable cytochrome c oxidase polypeptide I rsc0363 or rs03331 SWALL:Q8Y2H3 (EMBL:AL646058) (534 aa) fasta scores: E(): 3e-186, 84.86% id in 535 aa. Similar to BPSS0086, 78.719% identity (79.317% ungapped) in 531 aa overlap; cytochrome c oxidase polypeptide I 492944..494551 Burkholderia pseudomallei K96243 3091625 YP_107080.1 CDS BPSL0455 NC_006350.1 494620 494760 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0364 or rs03332 SWALL:Q8Y2H2 (EMBL:AL646058) (43 aa) fasta scores: E(): 0.86, 39.39% id in 33 aa; hypothetical protein 494620..494760 Burkholderia pseudomallei K96243 3092603 YP_107081.1 CDS BPSL0456 NC_006350.1 494782 495387 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 494782..495387 Burkholderia pseudomallei K96243 3092604 YP_107082.1 CDS BPSL0457 NC_006350.1 495407 495607 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0366 or rs03334 SWALL:Q8Y2H0 (EMBL:AL646058) (70 aa) fasta scores: E(): 4.5e-12, 58.73% id in 63 aa; hypothetical protein 495407..495607 Burkholderia pseudomallei K96243 3093867 YP_107083.1 CDS BPSL0458 NC_006350.1 495742 496599 D Similar to Salmo salar cytochrome c oxidase polypeptide III CoxIII SWALL:COX3_SALSA (SWALL:Q36860) (261 aa) fasta scores: E(): 2.4e-28, 42.02% id in 276 aa, and to Ralstonia solanacearum probable cytochrome c oxidase subunit III transmembrane protein rsc0367 or rs03335 SWALL:Q8Y2G9 (EMBL:AL646058) (286 aa) fasta scores: E(): 1.4e-87, 72.04% id in 279 aa; cytochrome c oxidase subunit III 495742..496599 Burkholderia pseudomallei K96243 3093868 YP_107084.1 CDS BPSL0458a NC_006350.1 496759 496968 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0368 or rs03336 SWALL:Q8Y2G8 (EMBL:AL646058) (69 aa) fasta scores: E(): 9.7e-14, 63.76% id in 69 aa, and to Xanthomonas campestris hypothetical protein Xcc3828 SWALL:Q8P483 (EMBL:AE012503) (72 aa) fasta scores: E(): 2.5e-05, 35.71% id in 70 aa; hypothetical protein complement(496759..496968) Burkholderia pseudomallei K96243 3092337 YP_107085.1 CDS BPSL0459 NC_006350.1 497056 497769 D Similar to Ralstonia solanacearum transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein rsc0369 or rs03337 SWALL:Q8Y2G7 (EMBL:AL646058) (256 aa) fasta scores: E(): 6.5e-33, 43.62% id in 243 aa, and to Rhizobium loti hypothetical protein mlr7500 SWALL:Q985W4 (EMBL:AP003011) (251 aa) fasta scores: E(): 6.8e-11, 29.67% id in 246 aa. Possible alternative translational start site; hypothetical protein 497056..497769 Burkholderia pseudomallei K96243 3092338 YP_107086.1 CDS BPSL0460 NC_006350.1 497831 498475 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0370 or rs03338 SWALL:Q8Y2G6 (EMBL:AL646058) (215 aa) fasta scores: E(): 6.2e-38, 52.7% id in 203 aa, and to Xanthomonas axonopodis hypothetical protein xac3881 SWALL:AAM38723 (EMBL:AE012037) (191 aa) fasta scores: E(): 6.1e-06, 26.56% id in 192 aa; hypothetical protein 497831..498475 Burkholderia pseudomallei K96243 3093165 YP_107087.1 CDS BPSL0461 NC_006350.1 498579 499628 D Similar to Ralstonia solanacearum heme O oxygenase CtaA SWALL:Q8Y2G5 (EMBL:AL646058) (363 aa) fasta scores: E(): 4.5e-83, 63.63% id in 330 aa, and to Pseudomonas aeruginosa hypothetical protein pa0112 SWALL:Q9I720 (EMBL:AE004449) (357 aa) fasta scores: E(): 1.1e-50, 45.59% id in 329 aa; cytochrome oxidase assembly protein 498579..499628 Burkholderia pseudomallei K96243 3093166 YP_107088.1 CDS BPSL0462 NC_006350.1 499641 500543 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 499641..500543 Burkholderia pseudomallei K96243 3092906 YP_107089.1 CDS BPSL0463 NC_006350.1 500563 501180 D Similar to Ralstonia solanacearum probable lipoprotein rsc0373 or rs03341 SWALL:Q8Y2G3 (EMBL:AL646058) (200 aa) fasta scores: E(): 5.3e-49, 64.76% id in 193 aa> Internal region is similar to Homo sapiens mitochondrial, cytochrome c oxidase subunit II processing protein SCO2 SWALL:SCO2_HUMAN (SWALL:O43819) (266 aa) fasta scores: E(): 8e-17, 35.67% id in 171 aa; lipoprotein 500563..501180 Burkholderia pseudomallei K96243 3092907 YP_107090.1 CDS BPSL0464 NC_006350.1 501260 501553 R Similar to Streptomyces coelicolor hypothetical protein sco6725 or SC5f2A.08c SWALL:Q9X7N1 (EMBL:AL049587) (98 aa) fasta scores: E(): 2.1e-13, 50% id in 90 aa, and to Rhizobium loti hypothetical protein mlr3009 SWALL:Q98H68 (EMBL:AP003000) (101 aa) fasta scores: E(): 1.8e-10, 42.9% id in 91 aa; hypothetical protein complement(501260..501553) Burkholderia pseudomallei K96243 3094571 YP_107091.1 CDS BPSL0465 NC_006350.1 501740 503380 D Similar to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc2799 or rs05622 SWALL:Q8XVN1 (EMBL:AL646071) (515 aa) fasta scores: E(): 1.7e-104, 64.32% id in 513 aa. C-terminus is similar to the C-terminal region of Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 3.9e-56, 61.65% id in 326 aa. Simlar to BPSS1218, 54.386% identity (54.492% ungapped) in 513 aa overlap; methyl-accepting chemotaxis protein 501740..503380 Burkholderia pseudomallei K96243 3094572 YP_107092.1 CDS BPSL0466 NC_006350.1 503530 504348 D Similar to Pasteurella haemolytica outer membrane lipoprotein 3 precursor PlpC SWALL:PLPC_PASHA (SWALL:Q08870) (263 aa) fasta scores: E(): 5.1e-41, 49.41% id in 257 aa, and to the C-terminal region of Ralstonia solanacearum outermembrane signal peptide protein rsc3386 or rs06100 SWALL:Q8XU08 (EMBL:AL646075) (529 aa) fasta scores: E(): 5.9e-63, 66.79% id in 268 aa. Similar to BPSS0266, 63.806% identity (64.528% ungapped) in 268 aa overlap and to BPSL2501, 60.294% identity (62.121% ungapped) in 272 aa overlapNote, although CDS is similar to characterized and predicted lipoproteins, it does not contain residues required for lipoprotein processing; hypothetical protein 503530..504348 Burkholderia pseudomallei K96243 3091607 YP_107093.1 CDS BPSL0467 NC_006350.1 504599 505570 D Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc1740 or rs02928 SWALL:Q8XYL8 (EMBL:AL646066) (329 aa) fasta scores: E(): 1.2e-77, 74.77% id in 329 aa, and to Pseudomonas aeruginosa hypothetical protein pa3836 SWALL:Q9HXG8 (EMBL:AE004801) (325 aa) fasta scores: E(): 2.9e-70, 67.83% id in 314 aa; hypothetical protein 504599..505570 Burkholderia pseudomallei K96243 3091608 YP_107094.1 CDS BPSL0468 NC_006350.1 505879 506775 D Similar to Ralstonia solanacearum transmembrane ABC transporter protein rsc1739 or rs02927 SWALL:Q8XYL9 (EMBL:AL646066) (303 aa) fasta scores: E(): 3.9e-90, 83.83% id in 297 aa. Weakly similar to the C-terminal region of Escherichia coli ribose transport system permease RbsC SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 5.1e-08, 23.81% id in 294 aa; branched-chain amino acid transport system permease 505879..506775 Burkholderia pseudomallei K96243 3093750 YP_107095.1 CDS BPSL0469 NC_006350.1 506776 507570 D Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1738 or rs02926 SWALL:Q8XYM0 (EMBL:AL646066) (264 aa) fasta scores: E(): 1.3e-71, 84.47% id in 264 aa, and to the N-terminal region Escherichia coli sulfate transport ATP-binding protein CysA SWALL:CYSA_ECOLI (SWALL:P16676) (365 aa) fasta scores: E(): 2.8e-12, 33.79% id in 219 aa; ABC transport system ATP-binding protein 506776..507570 Burkholderia pseudomallei K96243 3093751 YP_107096.1 CDS BPSL0471 NC_006350.1 508420 509895 D Similar to Ralstonia solanacearum hypothetical protein rsp0799 or rs01908 SWALL:Q8XRN2 (EMBL:AL646080) (523 aa) fasta scores: E(): 3e-53, 46.44% id in 521 aa, and to Xanthomonas axonopodis hypothetical protein xac1198 SWALL:Q8PN75 (EMBL:AE011749) (472 aa) fasta scores: E(): 9.2e-33, 36.67% id in 499 aa; hypothetical protein 508420..509895 Burkholderia pseudomallei K96243 3092796 YP_107097.1 CDS dnaE2 NC_006350.1 509901 513119 D DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 509901..513119 Burkholderia pseudomallei K96243 3092552 YP_107098.1 CDS BPSL0473 NC_006350.1 513457 514278 R Similar to Pseudomonas aeruginosa hypothetical protein pa5220 SWALL:Q9HTX0 (EMBL:AE004935) (273 aa) fasta scores: E(): 8.4e-70, 65.68% id in 271 aa; hypothetical protein complement(513457..514278) Burkholderia pseudomallei K96243 3092553 YP_107099.1 CDS BPSL0474 NC_006350.1 514322 515515 R Similar to Pseudomonas aeruginosa hypothetical protein pa5219 SWALL:Q9HTX1 (EMBL:AE004935) (397 aa) fasta scores: E(): 2.9e-62, 48.59% id in 391 aa. Weakly similar to Streptomyces lividans chloramphenicol resistance protein CmlR SWALL:CMLR_STRLI (SWALL:P31141) (392 aa) fasta scores: E(): 1.6e-09, 26.79% id in 377 aa; transporter protein complement(514322..515515) Burkholderia pseudomallei K96243 3093352 YP_107100.1 CDS BPSL0475 NC_006350.1 515717 516748 R Similar to Pseudomonas syringae hypothetical protein SWALL:Q52580 (EMBL:U27310) (327 aa) fasta scores: E(): 6.8e-20, 32.71% id in 321 aa. C-terminus is weakly similar to the C-terminal region of Synechocystis sp. fatty acid desaturase DesA SWALL:DESA_SYNY3 (SWALL:P20388) (351 aa) fasta scores: E(): 8.7e-07, 28.91% id in 249 aa; fatty acid desaturase complement(515717..516748) Burkholderia pseudomallei K96243 3093353 YP_107101.1 CDS BPSL0476 NC_006350.1 516794 518146 R Similar to Haemophilus influenzae diaminobutyrate--2-oxoglutarate aminotransferase Dat SWALL:DAT_HAEIN (SWALL:P44951) (454 aa) fasta scores: E(): 2.2e-76, 49.51% id in 412 aa, and to Rhizobium meliloti diaminobutyrate--2-oxoglutarate aminotransferase RhbA SWALL:RHBA_RHIME (SWALL:Q9Z3R2) (470 aa) fasta scores: E(): 4.9e-91, 54.4% id in 443 aa. Similar to BPSS1635, 56.019% identity (56.674% ungapped) in 432 aa overlap; diaminobutyrate--2-oxoglutarate aminotransferase complement(516794..518146) Burkholderia pseudomallei K96243 3093251 YP_107102.1 CDS BPSL0477 NC_006350.1 518191 518724 R hypothetical protein complement(518191..518724) Burkholderia pseudomallei K96243 3093252 YP_107103.1 CDS BPSL0478 NC_006350.1 518799 519890 R No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Rhizobium meliloti ABC transporter permease rb0870 or smb21204 SWALL:Q92V47 (EMBL:AL603645) (370 aa) fasta scores: E(): 7.5e-09, 28.5% id in 228 aa, and Brucella melitensis daunorubicin resistance transmembrane protein bmeii0801 SWALL:Q8YBT5 (EMBL:AE009714) (379 aa) fasta scores: E(): 2.9e-07, 24.59% id in 305 aa; hypothetical protein complement(518799..519890) Burkholderia pseudomallei K96243 3091811 YP_107104.1 CDS BPSL0479 NC_006350.1 519883 520839 R Similar to Streptomyces coelicolor ABC transporter ATP-binding subunit sco2305 or scc30.13 SWALL:Q9L008 (EMBL:AL352972) (308 aa) fasta scores: E(): 5.7e-09, 30.59% id in 317 aa, and to the N-terminal region of Rhodobacter capsulatus molybdenum transport ATP-binding protein ModC or MolD SWALL:MODC_RHOCA (SWALL:Q08381) (363 aa) fasta scores: E(): 1.8e-08, 28.98% id in 314 aa; ABC transport system ATP-binding protein complement(519883..520839) Burkholderia pseudomallei K96243 3091812 YP_107105.1 CDS BPSL0480 NC_006350.1 520932 521999 R Similar to Pseudomonas syringae syringomycin biosynthesis regulatory protein SyrP SWALL:P97053 (EMBL:U88574) (353 aa) fasta scores: E(): 1.9e-25, 35.54% id in 332 aa, and to Streptomyces verticillus SyrP-like protein SWALL:Q9FB16 (EMBL:AF210249) (339 aa) fasta scores: E(): 3.1e-32, 37.5% id in 320 aa; hypothetical protein complement(520932..521999) Burkholderia pseudomallei K96243 3092736 YP_107106.1 CDS BPSL0481 NC_006350.1 521996 522661 R Similar to the N-terminal regions of Deinococcus radiodurans methyltransferase dr0026 SWALL:Q9RYC4 (EMBL:AE001866) (269 aa) fasta scores: E(): 1.1e-08, 36.36% id in 209 aa, and Amycolatopsis mediterranei methyltransferase SWALL:O52570 (EMBL:AF040570) (272 aa) fasta scores: E(): 1.5e-05, 30.8% id in 224 aa; hypothetical protein complement(521996..522661) Burkholderia pseudomallei K96243 3092737 YP_107107.1 CDS BPSL0482 NC_006350.1 522701 523852 R Similar to Corynebacterium glutamicum 2-methylcitrate synthase 2 PrpC2 or cgl0659 SWALL:BAB98052 (EMBL:AF434799) (383 aa) fasta scores: E(): 6.2e-07, 26.81% id in 358 aa, and to Antarctic bacterium DS2-3R citrate synthase GltA or CisY SWALL:CISY_ABDS2 (SWALL:O34002) (379 aa) fasta scores: E(): 0.004, 23.59% id in 356 aa; hypothetical protein complement(522701..523852) Burkholderia pseudomallei K96243 3092808 YP_107108.1 CDS BPSL0483 NC_006350.1 523854 525725 R Similar to Mycobacterium tuberculosis acyl-CoA dehydrogenase rv0244c or mtv034.10c or mt0258 SWALL:O53666 (EMBL:AL021929) (611 aa) fasta scores: E(): 2.2e-44, 32.47% id in 622 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa1284 SWALL:Q9I460 (EMBL:AE004558) (606 aa) fasta scores: E(): 2.3e-43, 33.49% id in 612 aa; hypothetical protein complement(523854..525725) Burkholderia pseudomallei K96243 3092809 YP_107109.1 CDS BPSL0484 NC_006350.1 525722 526762 R Weakly similar to Escherichia coli 3-oxoacyl-[acyl-carrier-protein] synthase III FabH SWALL:FABH_ECOLI (SWALL:P24249) (317 aa) fasta scores: E(): 1.2, 24.28% id in 313 aa, and to Streptomyces coelicolor acyl carrier protein synthase sco3246 or SCE29.15c SWALL:Q9Z4Y5 (EMBL:AL035707) (330 aa) fasta scores: E(): 2.4e-06, 28.42% id in 299 aa; hypothetical protein complement(525722..526762) Burkholderia pseudomallei K96243 3093491 YP_107110.1 CDS BPSL0485 NC_006350.1 526780 528348 R Similar to Agrobacterium tumefaciens long-chain fatty acid-CoA ligase fadd or atu1672 or AGR_C_3078 SWALL:Q8UET3 (EMBL:AE009124) (510 aa) fasta scores: E(): 5e-60, 39.18% id in 513 aa, and to the N-terminal region of Pseudomonas syringae syringomycin biosynthesis enzyme 1 SyrB1 SWALL:Q52400 (EMBL:U25130) (614 aa) fasta scores: E(): 9.5e-30, 30.71% id in 521 aa. Simlar to the C-terminal region of BPSS1568, 50.958% identity (53.737% ungapped) in 522 aa overlap; AMP-binding enzyme complement(526780..528348) Burkholderia pseudomallei K96243 3093492 YP_107111.1 CDS BPSL0486 NC_006350.1 528356 529552 R Similar to Pseudomonas aeruginosa diaminopimelate decarboxylase LysA SWALL:DCDA_PSEAE (SWALL:P19572) (415 aa) fasta scores: E(): 5e-06, 27.2% id in 386 aa, and to Xanthomonas axonopodis diaminopimelate decarboxylase xac3181 SWALL:Q8PHR8 (EMBL:AE011963) (398 aa) fasta scores: E(): 1.7e-09, 27.34% id in 395 aa; pyridoxal-dependent decarboxylase complement(528356..529552) Burkholderia pseudomallei K96243 3092487 YP_107112.1 CDS BPSL0487 NC_006350.1 529542 530540 R Poor database matches. Similar to Erwinia chrysanthemi hypothetical protein VfmA SWALL:Q8RKD3 (EMBL:AJ438188) (275 aa) fasta scores: E(): 0.00013, 22.61% id in 252 aa; hypothetical protein complement(529542..530540) Burkholderia pseudomallei K96243 3092488 YP_107113.1 CDS BPSL0488 NC_006350.1 530545 531486 R Weakly similar to Streptomyces coelicolor membrane protein sco5299 or SC6G9.34 SWALL:Q9XAE8 (EMBL:AL079356) (312 aa) fasta scores: E(): 7e-07, 24.83% id in 302 aa, and to Synechocystis sp. hypothetical protein SLL0265 SWALL:P74402 (EMBL:D90914) (301 aa) fasta scores: E(): 0.29, 22.55% id in 266 aa; hypothetical protein complement(530545..531486) Burkholderia pseudomallei K96243 3093167 YP_107114.1 CDS BPSL0489 NC_006350.1 531547 532113 R hypothetical protein complement(531547..532113) Burkholderia pseudomallei K96243 3093168 YP_107115.1 CDS BPSL0490 NC_006350.1 532110 532997 R hypothetical protein complement(532110..532997) Burkholderia pseudomallei K96243 3092641 YP_107116.1 CDS BPSL0491 NC_006350.1 533030 533278 R Similar to Cylindrotheca sp. acyl carrier protein AcpP or Acl1 or Acp SWALL:ACP_CYLSN (SWALL:P27060) (80 aa) fasta scores: E(): 4.5, 36.36% id in 66 aa; acyl carrier protein complement(533030..533278) Burkholderia pseudomallei K96243 3092642 YP_107117.1 CDS BPSL0492 NC_006350.1 533334 534527 R Poor database matches. N-terminus is weakly similar to the C-terminal region of Streptomyces coelicolor lipase sco3219 or SCE8.12c SWALL:Q9Z360 (EMBL:AL035654) (391 aa) fasta scores: E(): 1.7, 27.92% id in 265 aa; hypothetical protein complement(533334..534527) Burkholderia pseudomallei K96243 3093091 YP_107118.1 CDS BPSL0493 NC_006350.1 534524 536290 R Similar to Burkholderia cepacia amino acid activating protein required for lipopeptide antibiotic production AfcA SWALL:Q9ZGQ2 (EMBL:AF076477) (587 aa) fasta scores: E(): 6.1e-106, 50.68% id in 586 aa, and to the N-terminal region of Myxococcus xanthus saframycin Mx1 synthetase B SafB SWALL:Q50857 (EMBL:U24657) (1770 aa) fasta scores: E(): 2.4e-41, 32.09% id in 567 aa; AMP-binding enzyme complement(534524..536290) Burkholderia pseudomallei K96243 3093092 YP_107119.1 CDS BPSL0494 NC_006350.1 536724 537647 D Similar to Bacillus subtilis als operon regulatory protein AlsR SWALL:ALSR_BACSU (SWALL:Q04778) (302 aa) fasta scores: E(): 1.3e-26, 33.33% id in 288 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5218 SWALL:Q9HTX2 (EMBL:AE004934) (304 aa) fasta scores: E(): 7.6e-45, 48.09% id in 289 aa; LysR family transcriptional regulator 536724..537647 Burkholderia pseudomallei K96243 3094239 YP_107120.1 CDS BPSL0495 NC_006350.1 538360 539124 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3757 SWALL:Q9HXN8 (EMBL:AE004794) (247 aa) fasta scores: E(): 3.5e-49, 58.65% id in 237 aa, and to Xanthomonas axonopodis GnrR family transcriptional regulator xac0711 SWALL:AAM35600 (EMBL:AE011701) (255 aa) fasta scores: E(): 1e-41, 50.6% id in 247 aa. Similar to BPSL0891, 62.500% identity (62.500% ungapped) in 240 aa overlap; GntR family transcriptional regulator 538360..539124 Burkholderia pseudomallei K96243 3094240 YP_107121.1 CDS BPSL0496 NC_006350.1 539223 540326 D Similar to Escherichia coli N-acetylglucosamine-6-phosphate deacetylase NagA SWALL:NAGA_ECOLI (SWALL:P15300) (382 aa) fasta scores: E(): 5.2e-23, 34.12% id in 337 aa, and to Pseudomonas aeruginosa probable N-acetylglucosamine-6-phosphate deacetylase pa3758 SWALL:Q9HXN7 (EMBL:AE004794) (363 aa) fasta scores: E(): 6.3e-93, 68.14% id in 361 aa; N-acetylglucosamine-6-phosphate deacetylase 539223..540326 Burkholderia pseudomallei K96243 3093684 YP_107122.1 CDS BPSL0497 NC_006350.1 540310 541326 D Similar to Pseudomonas aeruginosa probable aminotransferase pa3759 SWALL:Q9HXN6 (EMBL:AE004794) (340 aa) fasta scores: E(): 1e-70, 65.08% id in 338 aa, and to the C-terminal regions of many glucosamine--fructose-6-phosphate aminotransferases , including of Escherichia coli glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS SWALL:GLMS_ECOLI (SWALL:P17169) (608 aa) fasta scores: E(): 1.8e-09, 28.9% id in 339 aa; phosphosugar-binding protein 540310..541326 Burkholderia pseudomallei K96243 3093685 YP_107123.1 CDS BPSL0498 NC_006350.1 541360 543978 D Similar to Pseudomonas aeruginosa probable phosphotransferase pa3760 SWALL:Q9HXN5 (EMBL:AE004794) (842 aa) fasta scores: E(): 8e-102, 49.53% id in 860 aa. C-terminus is similar to the C-terminal region of Rhodobacter capsulatus multiphosphoryl transfer protein frub(hi) SWALL:PTF1_RHOCA (SWALL:P23388) (827 aa) fasta scores: E(): 2.7e-78, 40.73% id in 739 aa; multiphosphoryl transfer protein 541360..543978 Burkholderia pseudomallei K96243 3093340 YP_107124.1 CDS BPSL0499 NC_006350.1 544079 545851 D N-terminus is similar to the N-terminal region of Escherichia coli PTS system, N-acetylglucosamine-specific IIabc component NagE or PstN SWALL:PTAA_ECOLI (SWALL:P09323) (648 aa) fasta scores: E(): 1.2e-88, 52.51% id in 516 aa. Full length CDS is similar to Pseudomonas aeruginosa probable phosphotransferase system protein pa3761 SWALL:Q9HXN4 (EMBL:AE004794) (570 aa) fasta scores: E(): 1.2e-85, 56.15% id in 577 aa; phosphotransferase system, IIBC component 544079..545851 Burkholderia pseudomallei K96243 3093341 YP_107125.1 CDS BPSL0500 NC_006350.1 546569 549070 R Similar to Serratia marcescens chitobiase precursor Chb SWALL:CHB_SERMA (SWALL:Q54468) (885 aa) fasta scores: E(): 2e-118, 46.94% id in 801 aa, and to Burkholderia cepacia chitinase Bcc1 SWALL:Q9F1K5 (EMBL:AB053088) (826 aa) fasta scores: E(): 0, 85.8% id in 831 aa. CDS is truncated at the C-terminus in comparison to orthologues; chitobiase complement(546569..549070) Burkholderia pseudomallei K96243 3094367 YP_107126.1 CDS BPSL0500A NC_006350.1 550382 550480 R Similar to Bordetella pertussis exported protein SWALL:Q7W092 (EMBL:BX640411) (41 aa) fasta scores: E(): 1.1e-07, 71.42% id in 28 aa, and to Shewanella oneidensis conserved hypothetical protein SWALL:Q8EC60 (EMBL:AE015765) (38 aa) fasta scores: E(): 2.4e-07, 61.29% id in 31 aa; hypothetical protein complement(550382..550480) Burkholderia pseudomallei K96243 3094368 YP_107127.1 CDS cydB NC_006350.1 550571 551707 R Similar to Escherichia coli cytochrome d ubiquinol oxidase subunit II CydB or Cyd-2 SWALL:CYDB_ECOLI (SWALL:P11027) (379 aa) fasta scores: E(): 1.6e-77, 52.91% id in 378 aa, and to Caulobacter crescentus cytochrome d ubiquinol oxidase subunit II cc0763 SWALL:Q9AA43 (EMBL:AE005752) (383 aa) fasta scores: E(): 1.1e-84, 59.57% id in 376 aa; cytochrome d ubiquinol oxidase subunit II complement(550571..551707) Burkholderia pseudomallei K96243 3093122 YP_107128.1 CDS cydA NC_006350.1 551745 553340 R Similar to Escherichia coli cytochrome d ubiquinol oxidase subunit I CydA or Cyd-1 SWALL:CYDA_ECOLI (SWALL:P11026) (522 aa) fasta scores: E(): 6e-137, 64.87% id in 521 aa, and to Azotobacter vinelandii cytochrome d ubiquinol oxidase subunit I CydA SWALL:CYDA_AZOVI (SWALL:Q09049) (537 aa) fasta scores: E(): 6.2e-143, 68.66% id in 517 aa; cytochrome d ubiquinol oxidase subunit I complement(551745..553340) Burkholderia pseudomallei K96243 3091672 YP_107129.1 CDS BPSL0503 NC_006350.1 553330 553614 R hypothetical protein complement(553330..553614) Burkholderia pseudomallei K96243 3092140 YP_107130.1 CDS rpoH NC_006350.1 554070 555005 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(554070..555005) Burkholderia pseudomallei K96243 3094670 YP_107131.1 CDS BPSL0505 NC_006350.1 555370 555939 D Similar to Ralstonia solanacearum probable signal peptide protein rsp1201 or rs03145 SWALL:Q8XQM1 (EMBL:AL646083) (187 aa) fasta scores: E(): 1.3e-20, 38.25% id in 183 aa; hypothetical protein 555370..555939 Burkholderia pseudomallei K96243 3092141 YP_107132.1 CDS BPSL0506 NC_006350.1 555960 556367 D Similar to Ralstonia solanacearum hypothetical protein rsc3100 or rs00553 SWALL:Q8XUT5 (EMBL:AL646073) (131 aa) fasta scores: E(): 0.88, 29.82% id in 114 aa; hypothetical protein 555960..556367 Burkholderia pseudomallei K96243 3092727 YP_107133.1 CDS BPSL0507 NC_006350.1 556694 558334 R N-terminus is similar to the N-terminal region of Saccharomyces cerevisiae 2-isopropylmalate synthase LEU4 SWALL:LEU1_YEAST (SWALL:P06208) (619 aa) fasta scores: E(): 1.8e-95, 56.1% id in 442 aa. Similar to Ralstonia solanacearum 2-isopropylmalate synthase 2 rsp0322 or rs05445 SWALL:Q8XSZ5 (EMBL:AL646078) (576 aa) fasta scores: E(): 8.2e-119, 58.87% id in 552 aa; 2-isopropylmalate synthase complement(556694..558334) Burkholderia pseudomallei K96243 3092728 YP_107134.1 CDS BPSL0508 NC_006350.1 558769 559617 R No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Anabaena sp. hypothetical protein ALL0878 SWALL:Q8YYH2 (EMBL:AP003583) (272 aa) fasta scores: E(): 2.4e-12, 30.18% id in 222 aa, and to Streptomyces coelicolor acetyltransferase sco7150 or sc9a4.12C SWALL:Q9FBU1 (EMBL:AL391072) (278 aa) fasta scores: E(): 2.4e-06, 30.83% id in 240 aa. Similar to BPSS1168, 69.888% identity (69.888% ungapped) in 269 aa overlap; acetyltransferase (GNAT) family protein complement(558769..559617) Burkholderia pseudomallei K96243 3092599 YP_107135.1 CDS BPSL0509 NC_006350.1 560231 561211 R Similar to Yersinia pestis glycosyl transferase ypo2522 SWALL:Q8ZDN8 (EMBL:AJ414152) (319 aa) fasta scores: E(): 5.8e-38, 43.33% id in 300 aa, and weakly similar Bradyrhizobium japonicum anthranilate phosphoribosyltransferase TrpD SWALL:TRPD_BRAJA (SWALL:P94326) (337 aa) fasta scores: E(): 4.7e-06, 24.41% id in 299 aa; glycosyl transferase complement(560231..561211) Burkholderia pseudomallei K96243 3092600 YP_107136.1 CDS BPSL0510 NC_006350.1 561208 564063 R Similar to Klebsiella pneumoniae nitrate reductase NasA SWALL:NASA_KLEPN (SWALL:Q06457) (866 aa) fasta scores: E(): 9.5e-90, 40.97% id in 947 aa, and to Xanthomonas campestris nitrate reductase xcc2009 SWALL:AAM41298 (EMBL:AE012305) (912 aa) fasta scores: E(): 6.1e-181, 56.06% id in 931 aa; nitrate reductase complement(561208..564063) Burkholderia pseudomallei K96243 3094127 YP_107137.1 CDS BPSL0511 NC_006350.1 564060 564455 R Similar to Bacillus subtilis assimilatory nitrite reductase [NAD(P)H] small subunit NasE or NirD SWALL:NASE_BACSU (SWALL:P42436) (106 aa) fasta scores: E(): 9.4e-09, 34.69% id in 98 aa, and to Xanthomonas campestris nitrite assimilation small subunit xcc2008 SWALL:AAM41297 (EMBL:AE012305) (119 aa) fasta scores: E(): 7.5e-22, 57.75% id in 116 aa; nitrite reductase small subunit complement(564060..564455) Burkholderia pseudomallei K96243 3094128 YP_107138.1 CDS BPSL0512 NC_006350.1 564531 566975 R Similar to the N-terminal region of Klebsiella pneumoniae nitrite reductase [NAD(P)H] NasB SWALL:NIRB_KLEPN (SWALL:Q06458) (957 aa) fasta scores: E(): 2.3e-90, 36.3% id in 785 aa, and to the full length Pseudomonas aeruginosa assimilatory nitrite reductase large subunit pa1781 SWALL:Q9I2W1 (EMBL:AE004603) (816 aa) fasta scores: E(): 0, 74.11% id in 792 aa; nitrite reductase complement(564531..566975) Burkholderia pseudomallei K96243 3092067 YP_107139.1 CDS BPSL0513 NC_006350.1 567360 568004 D Similar to Homo sapiens maleylacetoacetate isomerase GSTZ1 or MAAI SWALL:MAAI_HUMAN (SWALL:O43708) (216 aa) fasta scores: E(): 2.5e-31, 47.39% id in 211 aa, and to Ralstonia solanacearum probable maleylacetoacetate isomerase rsc0384 or rs03352 SWALL:Q8Y2F2 (EMBL:AL646059) (216 aa) fasta scores: E(): 3.5e-54, 63.38% id in 213 aa; maleylacetoacetate isomerase 567360..568004 Burkholderia pseudomallei K96243 3092068 YP_107140.1 CDS BPSL0514 NC_006350.1 568161 569480 R Similar to the C-terminal region of Escherichia coli cell division protein FtsY SWALL:FTSY_ECOLI (SWALL:P10121) (497 aa) fasta scores: E(): 6.4e-41, 44% id in 425 aa, and to the full length Neisseria meningitidis cell division protein FtsY homolog nma0291 SWALL:FTSY_NEIMA (SWALL:P57010) (421 aa) fasta scores: E(): 4.2e-50, 50.33% id in 443 aa; cell division protein complement(568161..569480) Burkholderia pseudomallei K96243 3092707 YP_107141.1 CDS BPSL0515 NC_006350.1 569732 570358 D Similar to Ralstonia solanacearum hypothetical protein rsc0389 or rs03357 SWALL:Q8Y2E7 (EMBL:AL646059) (215 aa) fasta scores: E(): 3.1e-31, 52.31% id in 216 aa, and to Xanthomonas campestris hypothetical protein xcc2392 SWALL:AAM41670 (EMBL:AE012348) (207 aa) fasta scores: E(): 6.3e-24, 47.57% id in 206 aa; hypothetical protein 569732..570358 Burkholderia pseudomallei K96243 3092708 YP_107142.1 CDS coaD NC_006350.1 570469 570969 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 570469..570969 Burkholderia pseudomallei K96243 3092046 YP_107143.1 CDS fdx NC_006350.1 571032 571298 D Similar to Chromatium vinosum ferredoxin Fdx SWALL:FER_CHRVI (SWALL:P00208) (82 aa) fasta scores: E(): 2.3e-19, 72% id in 75 aa, and to Ralstonia solanacearum probable ferredoxin protein rsc0391 or rs03359 SWALL:Q8Y2E5 (EMBL:AL646059) (82 aa) fasta scores: E(): 6.2e-26, 85.36% id in 82 aa; ferredoxin 571032..571298 Burkholderia pseudomallei K96243 3094859 YP_107144.1 CDS BPSL0518 NC_006350.1 571468 572538 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(571468..572538) Burkholderia pseudomallei K96243 3094062 YP_107145.1 CDS pth NC_006350.1 572627 573232 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(572627..573232) Burkholderia pseudomallei K96243 3093142 YP_107146.2 CDS BPSL0520 NC_006350.1 573346 573960 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(573346..573960) Burkholderia pseudomallei K96243 3094063 YP_107147.1 CDS prs NC_006350.1 574124 575080 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(574124..575080) Burkholderia pseudomallei K96243 3093690 YP_107148.1 CDS ipk NC_006350.1 575258 576139 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(575258..576139) Burkholderia pseudomallei K96243 3092875 YP_107149.1 CDS lolB NC_006350.1 576173 576796 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB complement(576173..576796) Burkholderia pseudomallei K96243 3092876 YP_107150.1 CDS BPSL0525 NC_006350.1 576793 578613 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0398 or rs03366 SWALL:Q8Y2D8 (EMBL:AL646059) (642 aa) fasta scores: E(): 2.2e-43, 41.42% id in 630 aa> C-terminus is similar to the C-terminal region of Pseudomonas aeruginosa hypothetical protein pa4667 SWALL:YAG7_PSEAE (SWALL:P42810) (590 aa) fasta scores: E(): 1.7e-38, 30.1% id in 558 aa; hypothetical protein complement(576793..578613) Burkholderia pseudomallei K96243 3093198 YP_107151.1 CDS mutM NC_006350.1 578702 579532 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 578702..579532 Burkholderia pseudomallei K96243 3094283 YP_107152.1 CDS mutY NC_006350.1 579537 580643 D Similar to Escherichia coli A/G-specific adenine glycosylase MutY or MicA SWALL:MUTY_ECOLI (SWALL:P17802) (350 aa) fasta scores: E(): 6.2e-58, 44.69% id in 349 aa, and to Ralstonia solanacearum probable A/G-specific adenine glycosylase rsc0401 or rs03369 SWALL:Q8Y2D5 (EMBL:AL646059) (362 aa) fasta scores: E(): 7.1e-74, 59.67% id in 367 aa; A/G-specific adenine glycosylase 579537..580643 Burkholderia pseudomallei K96243 3092623 YP_107153.1 CDS BPSL0528 NC_006350.1 581037 581669 R Similar to Ralstonia solanacearum hypothetical protein rsc0402 or rs03370 SWALL:Q8Y2D4 (EMBL:AL646059) (216 aa) fasta scores: E(): 1.1e-38, 50.72% id in 207 aa. Weakly similar to the N-terminal region of Bacillus subtilis ATP-dependent protease LonA or Lon SWALL:LON1_BACSU (SWALL:P37945) (774 aa) fasta scores: E(): 0.58, 21.35% id in 192 aa; hypothetical protein complement(581037..581669) Burkholderia pseudomallei K96243 3093199 YP_107154.1 CDS BPSL0529 NC_006350.1 581696 582589 R Similar to Ralstonia solanacearum hypothetical protein rsc0403 or rs03371 SWALL:Q8Y2D3 (EMBL:AL646059) (296 aa) fasta scores: E(): 4.3e-67, 62.75% id in 298 aa, and to Neisseria meningitidis hypothetical protein nmb0738 SWALL:Q9K080 (EMBL:AE002428) (284 aa) fasta scores: E(): 4.2e-46, 50.87% id in 287 aa; hypothetical protein complement(581696..582589) Burkholderia pseudomallei K96243 3093646 YP_107155.1 CDS BPSL0530 NC_006350.1 582675 583643 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(582675..583643) Burkholderia pseudomallei K96243 3093647 YP_107156.1 CDS BPSL0531 NC_006350.1 583772 584227 R Similar to Escherichia coli nitrogen regulatory IIA protein PtsN or RpoP SWALL:PTSN_ECOLI (SWALL:P31222) (163 aa) fasta scores: E(): 1.9e-13, 36.3% id in 146 aa, and to Ralstonia solanacearum nitrogen regulatory IIA rsc0406 or rs03374 SWALL:Q8Y2D0 (EMBL:AL646059) (151 aa) fasta scores: E(): 2.6e-44, 78.14% id in 151 aa; nitrogen regulatory IIA protein complement(583772..584227) Burkholderia pseudomallei K96243 3092867 YP_107157.1 CDS BPSL0532 NC_006350.1 584514 584873 R Similar to Ralstonia solanacearum sigma-54 modulation protein rsc0407 or rs03375 SWALL:Q8Y2C9 (EMBL:AL646059) (117 aa) fasta scores: E(): 3.8e-25, 64.65% id in 116 aa, and to Alcaligenes eutrophus probable sigma(54) modulation protein SWALL:RP5M_ALCEU (SWALL:P28613) (130 aa) fasta scores: E(): 3.8e-23, 68% id in 100 aa; PTS system, EIIA component complement(584514..584873) Burkholderia pseudomallei K96243 3092868 YP_107158.1 CDS rpoN NC_006350.1 585023 586531 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(585023..586531) Burkholderia pseudomallei K96243 3094832 YP_107159.1 CDS BPSL0534 NC_006350.1 586700 587476 R Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0409 or rs03377 SWALL:Q8Y2C7 (EMBL:AL646059) (262 aa) fasta scores: E(): 9.2e-66, 79.11% id in 249 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q9EX70 (EMBL:AJ131690) (263 aa) fasta scores: E(): 1.1e-64, 80.4% id in 250 aa; ABC transporter ATP-binding protein complement(586700..587476) Burkholderia pseudomallei K96243 3091906 YP_107160.1 CDS BPSL0535 NC_006350.1 587473 588138 R Similar to Ralstonia solanacearum signal peptide protein rsc0410 or rs03378 SWALL:Q8Y2C6 (EMBL:AL646059) (191 aa) fasta scores: E(): 4.2e-29, 52.68% id in 186 aa. N-terminal region is similar to Alcaligenes eutrophus hypothetical protein SWALL:Q9EX71 (EMBL:AJ131690) (155 aa) fasta scores: E(): 6.9e-19, 51.4% id in 142 aa; OstA-like protein complement(587473..588138) Burkholderia pseudomallei K96243 3091907 YP_107161.1 CDS BPSL0536 NC_006350.1 588157 588771 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0411 or rs03379 SWALL:Q8Y2C5 (EMBL:AL646059) (210 aa) fasta scores: E(): 2.7e-28, 49.18% id in 183 aa, and to Pseudomonas aeruginosa hypothetical protein pa4459 SWALL:Q9HVV8 (EMBL:AE004860) (190 aa) fasta scores: E(): 8.8e-07, 27.89% id in 190 aa; hypothetical protein complement(588157..588771) Burkholderia pseudomallei K96243 3092936 YP_107162.1 CDS BPSL0537 NC_006350.1 588777 589316 R Similar to Ralstonia solanacearum hypothetical protein rsc0412 or rs03380 SWALL:Q8Y2C4 (EMBL:AL646059) (195 aa) fasta scores: E(): 1e-34, 60.47% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein pa4458 SWALL:Q9HVV9 (EMBL:AE004860) (179 aa) fasta scores: E(): 9.8e-29, 52.9% id in 172 aa; hypothetical protein complement(588777..589316) Burkholderia pseudomallei K96243 3092937 YP_107163.1 CDS BPSL0538 NC_006350.1 589316 590299 R Similar to Ralstonia solanacearum hypothetical protein rsc0413 or rs03381 SWALL:Q8Y2C3 (EMBL:AL646059) (333 aa) fasta scores: E(): 5.4e-79, 69.11% id in 327 aa, and to Xanthomonas campestris polysialic acid capsule expression protein xcc2797 SWALL:AAM42069 (EMBL:AE012392) (333 aa) fasta scores: E(): 3.4e-68, 59.69% id in 325 aa. Similar to BPSL2770, 50.649% identity (52.000% ungapped) in 308 aa overlap; hypothetical protein complement(589316..590299) Burkholderia pseudomallei K96243 3092678 YP_107164.1 CDS BPSL0539 NC_006350.1 590427 592436 D N-terminal region is similar to Escherichia coli glutathione-regulated potassium-efflux system protein KefB or TrkB SWALL:KEFB_ECOLI (SWALL:P45522) (601 aa) fasta scores: E(): 4.3e-51, 33.63% id in 562 aa. Full length CDS is similar to Ralstonia solanacearum glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein rsc0414 or rs03382 SWALL:Q8Y2C2 (EMBL:AL646059) (659 aa) fasta scores: E(): 2.6e-158, 66.86% id in 658 aa; sodium/hydrogen exchanger family protein 590427..592436 Burkholderia pseudomallei K96243 3092679 YP_107165.1 CDS BPSL0540 NC_006350.1 592520 593083 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 592520..593083 Burkholderia pseudomallei K96243 3094203 YP_107166.1 CDS BPSL0541 NC_006350.1 593177 593791 D Similar to Escherichia coli homoserine/homoserine lactone efflux protein RhtB SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 3e-15, 30.1% id in 196 aa, and to Ralstonia solanacearum probable transport transmembrane protein rsc0418 or rs03386 SWALL:Q8Y2B8 (EMBL:AL646059) (206 aa) fasta scores: E(): 1.7e-46, 61.65% id in 206 aa; LysE type translocator 593177..593791 Burkholderia pseudomallei K96243 3094204 YP_107167.1 CDS BPSL0542 NC_006350.1 593804 594661 D Similar to Ralstonia solanacearum hypothetical protein rsc1874 or rs03434 SWALL:Q8XY89 (EMBL:AL646067) (267 aa) fasta scores: E(): 5e-43, 48.88% id in 268 aa, and to the C-terminal region of Arabidopsis thaliana hypothetical protein AT5G19460 SWALL:Q8VXZ0 (EMBL:AY074342) (374 aa) fasta scores: E(): 8.2e-25, 35.58% id in 267 aa; NUDIX domain-containing protein 593804..594661 Burkholderia pseudomallei K96243 3094056 YP_107168.1 CDS purU NC_006350.1 594713 595594 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 594713..595594 Burkholderia pseudomallei K96243 3094057 YP_107169.1 CDS BPSL0544 NC_006350.1 595893 596927 R Similar to Ralstonia solanacearum probable transmembrane protein rsp0411 or rs00868 SWALL:Q8XSQ6 (EMBL:AL646078) (341 aa) fasta scores: E(): 8.7e-43, 44.44% id in 333 aa, and to weakly similar to Listeria monocytogenes hypothetical protein lmo0949 SWALL:Q8Y8F5 (EMBL:AL591977) (348 aa) fasta scores: E(): 6.8e-06, 23.16% id in 341 aa; hypothetical protein complement(595893..596927) Burkholderia pseudomallei K96243 3093773 YP_107170.1 CDS uvrA NC_006350.1 597179 600046 R Similar to Neisseria gonorrhoeae excinuclease ABC subunit A UvrA SWALL:UVRA_NEIGO (SWALL:Q50968) (950 aa) fasta scores: E(): 4e-202, 73.84% id in 952 aa, and to Ralstonia solanacearum probable excinuclease ABC subunit A rsc0420 or rs03388 SWALL:Q8Y2B6 (EMBL:AL646059) (954 aa) fasta scores: E(): 0, 84.8% id in 954 aa; excinuclease ABC subunit A complement(597179..600046) Burkholderia pseudomallei K96243 3091749 YP_107171.1 CDS BPSL0546 NC_006350.1 600260 601447 D Similar to Ralstonia solanacearum multidrug-efflux transporter transmembrane protein rsc0421 or rs03389 SWALL:Q8Y2B5 (EMBL:AL646059) (387 aa) fasta scores: E(): 2.8e-94, 67.01% id in 382 aa. Weakly similar to Staphylococcus aureus quinolone resistance protein NorA SWALL:NORA_STAAM (SWALL:P21191) (388 aa) fasta scores: E(): 6.5e-11, 24.73% id in 372 aa; transporter protein 600260..601447 Burkholderia pseudomallei K96243 3093774 YP_107172.1 CDS ssb NC_006350.1 601561 602115 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 601561..602115 Burkholderia pseudomallei K96243 3094097 YP_107173.1 CDS BPSL0548 NC_006350.1 602532 606566 D hypothetical protein 602532..606566 Burkholderia pseudomallei K96243 3093968 YP_107174.1 CDS BPSL0549A NC_006350.1 606593 607069 R N-terminus is similar to Corynebacterium glutamicum hypothetical protein SWALL:Q8VVJ6 (EMBL:AJ420072) (81 aa) fasta scores: E(): 0.0066, 46.66% id in 60 aa, and to the N-terminal region of Lactobacillus plantarum WCFS1 prophage LP1 protein 8 SWALL:Q88YW0 (EMBL:AL935253) (120 aa) fasta scores: E(): 0.008, 50% id in 56 aa; DNA-binding protein complement(606593..607069) Burkholderia pseudomallei K96243 3093969 YP_107175.1 CDS BPSL0550 NC_006350.1 607232 607906 D hypothetical protein 607232..607906 Burkholderia pseudomallei K96243 3093287 YP_107176.1 CDS BPSL0551 NC_006350.1 608007 608579 D No significant database matches. Similar to BPSL0759, 75.904% identity (76.829% ungapped) in 166 aa overlap; hypothetical protein 608007..608579 Burkholderia pseudomallei K96243 3093288 YP_107177.1 CDS BPSL0552 NC_006350.1 608641 608901 D hypothetical protein 608641..608901 Burkholderia pseudomallei K96243 3092587 YP_107178.1 CDS BPSL0553 NC_006350.1 608994 609410 D Poor database matches. N-terminus is weakly similar to the N-terminal region of Rhizobium etli hypothetical protein YH035 SWALL:AAM54968 (EMBL:U80928) (101 aa) fasta scores: E(): 0.0068, 40.84% id in 71 aa; DNA-binding protein 608994..609410 Burkholderia pseudomallei K96243 3092588 YP_107179.1 CDS BPSL0554 NC_006350.1 610092 610643 D Similar to bacteriophage phiE125 protein gp29 SWALL:Q8W6S2 (EMBL:AF447491) (186 aa) fasta scores: E(): 7.3e-05, 30.32% id in 155 aa. N-terminus is similar to Ralstonia solanacearum hypothetical protein rsp0632 or rs03735 SWALL:Q8XS49 (EMBL:AL646079) (96 aa) fasta scores: E(): 7.2e-11, 44.56% id in 92 aa; hypothetical protein 610092..610643 Burkholderia pseudomallei K96243 3093159 YP_107180.1 CDS BPSL0555 NC_006350.1 610643 611533 D Similar to the C-terminal region of Ralstonia solanacearum transmembrane protein rsc1707 or rs02900 SWALL:Q8XYQ1 (EMBL:AL646066) (371 aa) fasta scores: E(): 1.6e-25, 36.84% id in 285 aa; hypothetical protein 610643..611533 Burkholderia pseudomallei K96243 3093160 YP_107181.1 CDS BPSL0556 NC_006350.1 611544 612173 D hypothetical protein 611544..612173 Burkholderia pseudomallei K96243 3093336 YP_107182.1 CDS BPSL0557 NC_006350.1 612265 612618 R No significant database matches. Doubtful CDS; hypothetical protein complement(612265..612618) Burkholderia pseudomallei K96243 3093337 YP_107183.1 CDS BPSL0557A NC_006350.1 612642 612848 R Similar to internal regions of Chlorobium tepidum DNA helicase, SWALL:Q8KC08 (EMBL:AE012917) (1510 aa) fasta scores: E(): 1.3e-08, 76.59% id in 47 aa, and to Clostridium acetobutylicum superfamily I DNA helicase SWALL:Q97ES1 (EMBL:AE007800) (1351 aa) fasta scores: E(): 0.94, 50% id in 46 aa; hypothetical protein complement(612642..612848) Burkholderia pseudomallei K96243 3091864 YP_107184.1 CDS BPSL0558 NC_006350.1 613047 613364 D C-terminal region is similar to Rhizobium etli hypothetical protein YH035 SWALL:AAM54968 (EMBL:U80928) (101 aa) fasta scores: E(): 6.2e-07, 40.81% id in 98 aa, and Caulobacter crescentus Cro/CI family transcriptional regulator cc2771 SWALL:Q9A4Q9 (EMBL:AE005942) (119 aa) fasta scores: E(): 0.046, 35.48% id in 93 aa. Possible alternative translational start site; DNA-binding protein 613047..613364 Burkholderia pseudomallei K96243 3091865 YP_107185.1 CDS BPSL0559 NC_006350.1 613364 613921 D No significant database matches to the full length CDS. C-terminal region is similar to Sinorhizobium meliloti phage PBC5 hypothetical protein Orf68 SWALL:Q8W6F9 (EMBL:AF448724) (127 aa) fasta scores: E(): 3.4, 31.53% id in 111 aa; hypothetical protein 613364..613921 Burkholderia pseudomallei K96243 3092889 YP_107186.1 CDS BPSL0560 NC_006350.1 614088 614699 R Poor database matches. Weakly similar to an internal region of Herpes simplex virus DNA polymerase processivity factor UL42 SWALL:VPAP_HSV11 (SWALL:P10226) (488 aa) fasta scores: E(): 4.4, 27.48% id in 211 aa; hypothetical protein complement(614088..614699) Burkholderia pseudomallei K96243 3092890 YP_107187.1 CDS BPSL0561 NC_006350.1 614880 615416 R Poor database matches. C-terminal region is weakly similar to Caulobacter crescentus hypothetical protein CC3552 SWALL:Q9A2K9 (EMBL:AE006014) (118 aa) fasta scores: E(): 2.4, 28.57% id in 98 aa; hypothetical protein complement(614880..615416) Burkholderia pseudomallei K96243 3094645 YP_107188.1 CDS BPSL0562 NC_006350.1 615702 616079 D N-terminus is similar to the N-terminal region of Stigmatella aurantiaca transcriptional repressor SWALL:Q93TW4 (EMBL:AF319998) (119 aa) fasta scores: E(): 3.1e-06, 48.64% id in 74 aa. Full length CDS is weakly similar to Clostridium acetobutylicum predicted transcriptional regulator cac1578 SWALL:Q97IR2 (EMBL:AE007667) (110 aa) fasta scores: E(): 0.01, 27.36% id in 95 aa; DNA-binding protein 615702..616079 Burkholderia pseudomallei K96243 3094646 YP_107189.1 CDS BPSL0563 NC_006350.1 616192 616656 R hypothetical protein complement(616192..616656) Burkholderia pseudomallei K96243 3092974 YP_107190.1 CDS BPSL0564 NC_006350.1 616778 617386 R Poor database matches. C-terminus is similar to the C-terminal region of Anabaena sp. hypothetical protein ALL4139 SWALL:Q8YPQ3 (EMBL:AP003595) (238 aa) fasta scores: E(): 8.9e-06, 33.11% id in 151 aa; hypothetical protein complement(616778..617386) Burkholderia pseudomallei K96243 3092975 YP_107191.1 CDS BPSL0565 NC_006350.1 617396 621349 R hypothetical protein complement(617396..621349) Burkholderia pseudomallei K96243 3093873 YP_107192.1 CDS BPSL0566 NC_006350.1 621413 623332 R Poor database matches. Weakly similar to Halobacterium sp. hypothetical protein VNG6173c SWALL:Q9HHY2 (EMBL:AE005152) (667 aa) fasta scores: E(): 0.0023, 22.22% id in 513 aa, and to Agrobacterium tumefaciens hypothetical protein Yme SWALL:O52294 (EMBL:AF242881) (660 aa) fasta scores: E(): 0.034, 21.92% id in 625 aa; hypothetical protein complement(621413..623332) Burkholderia pseudomallei K96243 3093874 YP_107193.1 CDS BPSL0567 NC_006350.1 623319 623780 R hypothetical protein complement(623319..623780) Burkholderia pseudomallei K96243 3094548 YP_107194.1 CDS BPSL0568 NC_006350.1 623813 624394 R Poor database matches. Weakly similar to the N-terminal region of Bacillus halodurans dipeptidase bh2271 SWALL:Q9KAL6 (EMBL:AP001515) (310 aa) fasta scores: E(): 3.6, 20.1% id in 194 aa; hypothetical protein complement(623813..624394) Burkholderia pseudomallei K96243 3094549 YP_107195.1 CDS BPSL0569 NC_006350.1 625112 625948 D Similar to Thermoplasma acidophilum hypothetical protein TA0490 SWALL:Q9HKV3 (EMBL:AL445064) (277 aa) fasta scores: E(): 9.1e-47, 48.16% id in 272 aa, and to Thermoplasma volcanium hypothetical protein TV0581 or tvg0570508 SWALL:Q97B76 (EMBL:AP000992) (277 aa) fasta scores: E(): 1.1e-45, 47.42% id in 272 aa; hypothetical protein 625112..625948 Burkholderia pseudomallei K96243 3092662 YP_107196.1 CDS BPSL0570 NC_006350.1 625952 626689 D Similar to Thermoplasma acidophilum hypothetical protein TA0489 SWALL:Q9HKV4 (EMBL:AL445064) (231 aa) fasta scores: E(): 4.9e-10, 25.41% id in 240 aa, and to Thermoplasma volcanium hypothetical protein TV0582 or tvg0571216 SWALL:Q97B75 (EMBL:AP000992) (232 aa) fasta scores: E(): 3e-07, 24.78% id in 230 aa; hypothetical protein 625952..626689 Burkholderia pseudomallei K96243 3092663 YP_107197.1 CDS BPSL0571 NC_006350.1 626686 628548 D No significant database matches to the full length CDS. N-terminus is similar to the C-terminal regions of Thermoplasma acidophilum hypothetical protein TA0488 SWALL:Q9HKV5 (EMBL:AL445064) (409 aa) fasta scores: E(): 4.6e-16, 31.67% id in 281 aa, and Thermoplasma volcanium hypothetical protein TV0583 or TVG0571194 SWALL:Q97B74 (EMBL:AP000992) (401 aa) fasta scores: E(): 2e-15, 29.43% id in 282 aa; hypothetical protein 626686..628548 Burkholderia pseudomallei K96243 3092239 YP_107198.1 CDS BPSL0572 NC_006350.1 628668 629738 R hypothetical protein complement(628668..629738) Burkholderia pseudomallei K96243 3092240 YP_107199.1 CDS BPSL0573 NC_006350.1 629903 630907 D hypothetical protein 629903..630907 Burkholderia pseudomallei K96243 3094694 YP_107200.1 CDS BPSL0574 NC_006350.1 631502 633238 D Poor database matches. Internal region is weakly similar to an internal region of Bacillus sp. subtilisin precursor Sub1 SWALL:SUBT_BACS9 (SWALL:P28842) (420 aa) fasta scores: E(): 0.036, 28.52% id in 305 aa. N-terminus is weakly similar to the N-terminal region of Thermoanaerobacter tengcongensis subtilisin-like serine proteases TTE0824 SWALL:Q8RBJ2 (EMBL:AE013049) (561 aa) fasta scores: E(): 0.003, 26.44% id in 484 aa; subtilase 631502..633238 Burkholderia pseudomallei K96243 3094695 YP_107201.1 CDS BPSL0574A NC_006350.1 633336 633461 D hypothetical protein 633336..633461 Burkholderia pseudomallei K96243 3093922 YP_107202.1 CDS BPSL0574B NC_006350.1 633550 633945 R hypothetical protein complement(633550..633945) Burkholderia pseudomallei K96243 3093923 YP_107203.1 CDS BPSL0575 NC_006350.1 633977 635932 R Poor database matches. N-terminus is weakly similar to the N-terminal region of Xanthomonas axonopodis hypothetical protein XAC2902 SWALL:AAM37747 (EMBL:AE011932) (616 aa) fasta scores: E(): 3.3e-08, 23.19% id in 608 aa; hypothetical protein complement(633977..635932) Burkholderia pseudomallei K96243 3094487 YP_107204.1 CDS BPSL0576 NC_006350.1 635943 637436 R Weakly similar to Pasteurella multocida hypothetical protein PM1948 SWALL:Q9CJP6 (EMBL:AE006231) (506 aa) fasta scores: E(): 3.4e-08, 23.3% id in 502 aa, and to Xanthomonas axonopodis hypothetical protein XAC2903 SWALL:AAM37748 (EMBL:AE011932) (526 aa) fasta scores: E(): 6.7e-07, 25.44% id in 507 aa; hypothetical protein complement(635943..637436) Burkholderia pseudomallei K96243 3094488 YP_107205.1 CDS BPSL0577 NC_006350.1 637433 638611 R Weakly similar to Xanthomonas axonopodis integrase/recombinase Int or XAC2904 SWALL:AAM37749 (EMBL:AE011932) (439 aa) fasta scores: E(): 1.3e-07, 24.29% id in 428 aa, and to Escherichia coli O157:H7 site specific recombinase ECS3512 SWALL:Q8X3D8 (EMBL:AP002562) (401 aa) fasta scores: E(): 9e-07, 23.34% id in 377 aa; phage integrase complement(637433..638611) Burkholderia pseudomallei K96243 3093791 YP_107206.1 CDS BPSL0578 NC_006350.1 640045 640776 R Weakly similar to Pseudomonas putida, and Pseudomonas sp. carboxymethylenebutenolidase ClcD SWALL:CLCD_PSEPU (SWALL:P11453) (236 aa) fasta scores: E(): 3.7e-05, 24.65% id in 215 aa. Similar to Streptomyces coelicolor hypothetical protein SCO0254 or SCJ9A.33c SWALL:Q9S1N7 (EMBL:AL109972) (246 aa) fasta scores: E(): 1.6e-24, 38.43% id in 242 aa; dienelactone hydrolase complement(640045..640776) Burkholderia pseudomallei K96243 3093792 YP_107207.1 CDS BPSL0579 NC_006350.1 641119 642699 D hypothetical protein 641119..642699 Burkholderia pseudomallei K96243 3094635 YP_107208.1 CDS BPSL0580 NC_006350.1 642861 643112 R hypothetical protein complement(642861..643112) Burkholderia pseudomallei K96243 3094636 YP_107209.1 CDS BPSL0581 NC_006350.1 643285 643602 R Similar to Ralstonia solanacearum hypothetical protein rsc2699 or rs00020 SWALL:Q8XVX6 (EMBL:AL646071) (105 aa) fasta scores: E(): 1.7e-16, 55.44% id in 101 aa; hypothetical protein complement(643285..643602) Burkholderia pseudomallei K96243 3094274 YP_107210.1 CDS BPSL0582 NC_006350.1 644090 646162 R Poor database matches. Internal region is similar to an internal region of Staphylococcus aureus exfoliative toxin B plasmid hypothetical protein Orf24 SWALL:Q8VVS1 (EMBL:AP003088) (590 aa) fasta scores: E(): 4.4e-06, 22.03% id in 472 aa; hypothetical protein complement(644090..646162) Burkholderia pseudomallei K96243 3094275 YP_107211.1 CDS BPSL0583 NC_006350.1 646155 647489 R hypothetical protein complement(646155..647489) Burkholderia pseudomallei K96243 3091803 YP_107212.1 CDS BPSL0584 NC_006350.1 648080 649468 R hypothetical protein complement(648080..649468) Burkholderia pseudomallei K96243 3091804 YP_107213.1 CDS BPSL0585 NC_006350.1 649491 649814 R hypothetical protein complement(649491..649814) Burkholderia pseudomallei K96243 3094489 YP_107214.1 CDS BPSL0586 NC_006350.1 649836 650156 R hypothetical protein complement(649836..650156) Burkholderia pseudomallei K96243 3094490 YP_107215.1 CDS BPSL0586a NC_006350.1 650966 651667 D Poor database matches. N-terminus is similar to the N-terminal region of Staphylococcus aureus aureus hypothetical protein MW0047 SWALL:Q8VUW0 (EMBL:AB063172) (206 aa) fasta scores: E(): 7.5, 26.19% id in 84 aa; hypothetical protein 650966..651667 Burkholderia pseudomallei K96243 3093827 YP_107216.1 CDS BPSL0587 NC_006350.1 651797 652423 R Similar to Escherichia coli recombinase SWALL:Q8VR85 (EMBL:AF447814) (200 aa) fasta scores: E(): 1.2e-47, 61.22% id in 196 aa, and to the C-terminal region of Escherichia coli integrase/recombinase XerD or XprB SWALL:XERD_ECOLI (SWALL:P21891) (298 aa) fasta scores: E(): 0.00042, 23.03% id in 165 aa; phage integrase complement(651797..652423) Burkholderia pseudomallei K96243 3093828 YP_107217.1 CDS BPSL0588 NC_006350.1 652627 653193 R Poor database matches. Weakly similar to Caenorhabditis elegans hypothetical protein R13F6.1 SWALL:Q95QB8 (EMBL:U00046) (149 aa) fasta scores: E(): 1.9, 25.75% id in 132 aa; hypothetical protein complement(652627..653193) Burkholderia pseudomallei K96243 3093372 YP_107218.1 CDS BPSL0589 NC_006350.1 653396 653746 R Similar to Thermoanaerobacter tengcongensis hypothetical protein TTE0299 SWALL:Q8RCV6 (EMBL:AE013003) (110 aa) fasta scores: E(): 3e-11, 44.21% id in 95 aa, and to Alcaligenes eutrophus hypothetical protein in acoC 3'region SWALL:YAC7_ALCEU (SWALL:P27749) (113 aa) fasta scores: E(): 6.7e-11, 40% id in 95 aa; hypothetical protein complement(653396..653746) Burkholderia pseudomallei K96243 3093373 YP_107219.1 CDS BPSL0590 NC_006350.1 654016 660111 R N-terminus is weakly similar to Photorhabdus luminescens insecticidal toxin complex protein TcaC SWALL:O85153 (EMBL:AF046867) (1485 aa) fasta scores: E(): 3.7e-18, 22.82% id in 1472 aa, and to the N-terminal reion of Yersinia pestis insecticidal toxin complex YPO3678 SWALL:Q8ZAV4 (EMBL:AJ414158) (1496 aa) fasta scores: E(): 7.7e-20, 25.34% id in 1227 aa; hypothetical protein complement(654016..660111) Burkholderia pseudomallei K96243 3092206 YP_107220.1 CDS BPSL0591 NC_006350.1 660133 663417 R Internal region is similar to the C-terminal region of Photorhabdus luminescens insecticidal toxin complex protein TccB SWALL:O85156 (EMBL:AF047028) (1565 aa) fasta scores: E(): 0.028, 22.05% id in 544 aa. Contains coiled-coiled domains, residues 520 to 549 and 640 to 666; hypothetical protein complement(660133..663417) Burkholderia pseudomallei K96243 3092207 YP_107221.1 CDS BPSL0592 NC_006350.1 664602 664985 R hypothetical protein complement(664602..664985) Burkholderia pseudomallei K96243 3093609 YP_107222.1 CDS BPSL0593 NC_006350.1 665003 665440 R hypothetical protein complement(665003..665440) Burkholderia pseudomallei K96243 3093610 YP_107223.1 CDS BPSL0594 NC_006350.1 665667 666014 R hypothetical protein complement(665667..666014) Burkholderia pseudomallei K96243 3093648 YP_107224.1 CDS BPSL0595 NC_006350.1 666528 666893 R hypothetical protein complement(666528..666893) Burkholderia pseudomallei K96243 3093649 YP_107225.1 CDS BPSL0596 NC_006350.1 667141 668148 D Poor database matches. N-terminus is weakly similar to the N-terminal region of Streptomyces coelicolor hypothetical protein SCO1806 or SCI33.05c SWALL:Q9AJX1 (EMBL:AL513407) (876 aa) fasta scores: E(): 0.071, 26.79% id in 321 aa; DNA-binding protein 667141..668148 Burkholderia pseudomallei K96243 3094462 YP_107226.1 CDS BPSL0597 NC_006350.1 668159 672238 D No significant database matches to the full length CDS. N-terminal region is similar to Myxococcus xanthus serine/threonine-protein kinase Pkn2 SWALL:PKN2_MYXXA (SWALL:P54736) (830 aa) fasta scores: E(): 2e-20, 26.44% id in 624 aa. C-terminal region is similar to Rhizobium meliloti adenylate cyclase ra0987 or sma1789 SWALL:Q92Y97 (EMBL:AE007284) (1118 aa) fasta scores: E(): 8.3e-47, 27.54% id in 1042 aa; protein kinase 668159..672238 Burkholderia pseudomallei K96243 3094463 YP_107227.1 CDS BPSL0598 NC_006350.1 672235 672597 D hypothetical protein 672235..672597 Burkholderia pseudomallei K96243 3093942 YP_107228.1 CDS BPSL0599 NC_006350.1 672599 672961 D hypothetical protein 672599..672961 Burkholderia pseudomallei K96243 3093943 YP_107229.1 CDS BPSL0600 NC_006350.1 673053 675353 D Poor database matches. Similar to Streptomyces violaceoruber granaticin biosynthetic gene cluster protein Gra-Orf12 SWALL:Q9ZA45 (EMBL:AJ011500) (751 aa) fasta scores: E(): 6.9e-09, 34.97% id in 729 aa; hypothetical protein 673053..675353 Burkholderia pseudomallei K96243 3092918 YP_107230.1 CDS BPSL0601 NC_006350.1 675423 676199 D Similar to Ralstonia solanacearum aldolase rsc0806 or rs05016 SWALL:Q8Y184 (EMBL:AL646061) (261 aa) fasta scores: E(): 7.7e-36, 43.52% id in 255 aa, and to an internal region of Homo sapiens alpha adducin ADD1 or ADDA SWALL:ADDA_HUMAN (SWALL:P35611) (737 aa) fasta scores: E(): 9.6e-27, 41.4% id in 256 aa; aldolase 675423..676199 Burkholderia pseudomallei K96243 3092919 YP_107231.1 CDS BPSL0602 NC_006350.1 676682 679045 D No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Pseudomonas aeruginosa hypothetical protein PA0861 SWALL:Q9I580 (EMBL:AE004521) (818 aa) fasta scores: E(): 6.4e-71, 41.01% id in 668 aa, and Rhizobium loti hypothetical protein MLR3171 SWALL:Q98GU5 (EMBL:AP003001) (832 aa) fasta scores: E(): 6.8e-65, 38.74% id in 671 aa; hypothetical protein 676682..679045 Burkholderia pseudomallei K96243 3092194 YP_107232.1 CDS BPSL0603 NC_006350.1 679223 680491 R Similar to Escherichia coli O-antigen transporter RfbX or Wzx SWALL:RFBX_ECOLI (SWALL:P37746) (415 aa) fasta scores: E(): 4.6e-37, 29.34% id in 409 aa, and to Methanobacterium thermoautotrophicum O-antigen transporter MTH347 SWALL:O26447 (EMBL:AE000819) (420 aa) fasta scores: E(): 1.2e-44, 32.34% id in 405 aa; polysaccharide biosynthesis protein complement(679223..680491) Burkholderia pseudomallei K96243 3092195 YP_107233.1 CDS BPSL0604 NC_006350.1 680568 681764 R Similar to Escherichia coli glycosyltransferase WcaO SWALL:Q9X4C4 (EMBL:AF104912) (393 aa) fasta scores: E(): 1.5e-22, 28.93% id in 356 aa, and to Rhizobium meliloti glycosyltransferase, forming alpha-gylcosyl linkages protein ExpE4 or rb0887 or smb21311 SWALL:P96434 (EMBL:Z79692) (420 aa) fasta scores: E(): 8e-10, 28.57% id in 350 aa; glycosyl transferase complement(680568..681764) Burkholderia pseudomallei K96243 3094501 YP_107234.1 CDS manC NC_006350.1 681799 683391 R Similar to Salmonella typhimurium mannose-1-phosphate guanylyltransferase ManC or CpsB or RfbM SWALL:MANC_SALTY (SWALL:P26340) (480 aa) fasta scores: E(): 2.4e-83, 52.26% id in 486 aa, and to Aeromonas hydrophila mannose-1-phosphate guanylyltransferase ManC SWALL:AAM22554 (EMBL:AF343089) (501 aa) fasta scores: E(): 1.2e-88, 47.74% id in 488 aa. Similar to BPSS1835, 63.843% identity (64.644% ungapped) in 484 aa overlap. CDS is extended at the C-terminus in comparison to orthologues and paralogue; mannose-1-phosphate guanylyltransferase complement(681799..683391) Burkholderia pseudomallei K96243 3093567 YP_107235.1 CDS BPSL0606 NC_006350.1 683388 684038 R N-terminal region is similar to Escherichia coli protein ElaA SWALL:ELAA_ECOLI (SWALL:P52077) (153 aa) fasta scores: E(): 1.9e-10, 34% id in 150 aa, and to Pseudomonas aeruginosa hypothetical protein PA0115 SWALL:Q9I717 (EMBL:AE004449) (150 aa) fasta scores: E(): 2.2e-10, 34.43% id in 151 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein complement(683388..684038) Burkholderia pseudomallei K96243 3094502 YP_107236.1 CDS BPSL0607 NC_006350.1 684416 685657 D Similar to Actinobacillus actinomycetemcomitans mannosyl transferase Orf7 SWALL:Q9JRR8 (EMBL:AB041266) (372 aa) fasta scores: E(): 1.6e-73, 53.51% id in 370 aa, and to Anabaena sp. mannosyl transferase ALL4830 SWALL:Q8YMU7 (EMBL:AP003597) (379 aa) fasta scores: E(): 3.6e-64, 49.18% id in 370 aa. CDS is extended at the C-terminus in comparison to orthologues. N-terminal region is similar to an internal region of BPSS1684, 66.067% identity (67.102% ungapped) in 389 aa overlap; glycosyl transferase 684416..685657 Burkholderia pseudomallei K96243 3092454 YP_107237.1 CDS BPSL0608 NC_006350.1 685685 686419 D Similar to Aeromonas hydrophila hypothetical protein SWALL:Q9X647 (EMBL:AF131869) (264 aa) fasta scores: E(): 2.7e-11, 32.66% id in 251 aa; PAP2 superfamily protein 685685..686419 Burkholderia pseudomallei K96243 3092455 YP_107238.1 CDS BPSL0609 NC_006350.1 687164 688552 D Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 9.5e-49, 39.66% id in 416 aa, and to Ralstonia solanacearum sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 2.2e-77, 50.83% id in 421 aa. Similar to BPSL2474, 58.652% identity (60.277% ungapped) in 445 aa overlap , and to BPSL2475, 55.928% identity (57.208% ungapped) in 447 aa overlap. Possible alternative translational start site; Fis family transcriptional regulator 687164..688552 Burkholderia pseudomallei K96243 3094535 YP_107239.1 CDS BPSL0610 NC_006350.1 688607 690583 R Poor database matches. Weakly similar to Agrobacterium tumefaciens hypothetical protein ATU2576 or AGR_C_4666 SWALL:Q8UCC2 (EMBL:AE009203) (619 aa) fasta scores: E(): 9.6e-17, 30.24% id in 625 aa; hypothetical protein complement(688607..690583) Burkholderia pseudomallei K96243 3094536 YP_107240.1 CDS BPSL0611 NC_006350.1 690580 693099 R Similar to Agrobacterium tumefaciens mannosidase ATU2575 or AGR_C_4665 SWALL:Q8UCC3 (EMBL:AE009203) (818 aa) fasta scores: E(): 1.9e-138, 46.9% id in 823 aa. Weakly similar to Capra hircus beta-mannosidase precursor MANBA SWALL:MANB_CAPHI (SWALL:Q95327) (879 aa) fasta scores: E(): 1.9e-15, 24.54% id in 770 aa; glycosyl hydrolase complement(690580..693099) Burkholderia pseudomallei K96243 3092084 YP_107241.1 CDS BPSL0612 NC_006350.1 693096 694184 R Similar to Agrobacterium tumefaciens hypothetical protein ATU2574 or AGR_C_4664 SWALL:Q8UCC4 (EMBL:AE009203) (327 aa) fasta scores: E(): 3.4e-48, 43.36% id in 309 aa; hypothetical protein complement(693096..694184) Burkholderia pseudomallei K96243 3092085 YP_107242.1 CDS BPSL0613 NC_006350.1 694181 695155 R Similar to Agrobacterium tumefaciens hypothetical protein ATU2573 or AGR_C_4663 SWALL:Q8UCC5 (EMBL:AE009203) (327 aa) fasta scores: E(): 8.2e-73, 56.23% id in 313 aa; hypothetical protein complement(694181..695155) Burkholderia pseudomallei K96243 3093544 YP_107243.1 CDS BPSL0614 NC_006350.1 695152 696375 R Similar to Agrobacterium tumefaciens acyl-CoA dehydrogenase Acd or ATU2572 or AGR_C_4660 SWALL:Q8UCC6 (EMBL:AE009203) (393 aa) fasta scores: E(): 3.7e-73, 50.91% id in 381 aa, and to Clostridium acetobutylicum acyl-CoA dehydrogenase, short-chain specific Bcd or CAC2711 SWALL:ACDS_CLOAB (SWALL:P52042) (379 aa) fasta scores: E(): 1.3e-07, 21.39% id in 374 aa. CDS is extended at the N-terminus in comparison to orthologues; acyl-CoA dehydrogenase complement(695152..696375) Burkholderia pseudomallei K96243 3093545 YP_107244.1 CDS BPSL0615 NC_006350.1 696372 696674 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(696372..696674) Burkholderia pseudomallei K96243 3094361 YP_107245.1 CDS BPSL0616 NC_006350.1 696875 697669 R Similar to Synechocystis sp. hypothetical protein SLL1169 SWALL:P74198 (EMBL:D90913) (238 aa) fasta scores: E(): 1.4e-22, 34.52% id in 223 aa, and to Rhizobium loti hypothetical protein MLR2110 SWALL:Q98J44 (EMBL:AP002999) (243 aa) fasta scores: E(): 8.4e-11, 28.44% id in 225 aa. Possible alternative translational start site; hypothetical protein complement(696875..697669) Burkholderia pseudomallei K96243 3094362 YP_107246.1 CDS BPSL0617 NC_006350.1 698536 699402 D Similar to Synechocystis sp. hypothetical protein SLL1169 SWALL:P74198 (EMBL:D90913) (238 aa) fasta scores: E(): 5.3e-35, 40.92% id in 237 aa, and to Rhizobium meliloti hypothetical protein ra1066 or sma1948 SWALL:Q92Y22 (EMBL:AE007292) (238 aa) fasta scores: E(): 2.9e-21, 34.07% id in 226 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein 698536..699402 Burkholderia pseudomallei K96243 3092616 YP_107247.1 CDS BPSL0618 NC_006350.1 699399 700817 D Similar to Escherichia coli colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 9.8e-58, 37.08% id in 480 aa, and to Klebsiella pneumoniae probable capsular polysaccharide biosynthesis glycosyltransferase SWALL:YC14_KLEPN (SWALL:Q48460) (465 aa) fasta scores: E(): 8.3e-54, 35.71% id in 476 aa. Similar to BPSS1834, 50.433% identity (50.873% ungapped) in 462 aa overlap; sugar transferase 699399..700817 Burkholderia pseudomallei K96243 3092617 YP_107248.1 CDS BPSL0619 NC_006350.1 700889 702178 D Similar to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fasta scores: E(): 1.4e-22, 33.9% id in 407 aa, and to Ralstonia solanacearum EPSI polysaccharide export outer membrane protein EpsA SWALL:EPA1_RALSO (SWALL:P58597) (381 aa) fasta scores: E(): 1.3e-20, 34.65% id in 404 aa; polysaccharide biosynthesis/export protein 700889..702178 Burkholderia pseudomallei K96243 3094301 YP_107249.1 CDS BPSL0620 NC_006350.1 702458 703603 D Similar to Rhizobium meliloti glycosyltransferase rb0655 or smb21076 SWALL:Q92VP4 (EMBL:AL603644) (377 aa) fasta scores: E(): 3.7e-42, 38.85% id in 368 aa, and to Deinococcus radiodurans mannosyltransferase dra0039 SWALL:Q9RZB5 (EMBL:AE001862) (343 aa) fasta scores: E(): 1.5e-29, 37.92% id in 356 aa. Possible alternative translational start site; group 1 glycosyl transferase 702458..703603 Burkholderia pseudomallei K96243 3094302 YP_107250.1 CDS BPSL0621 NC_006350.1 703632 704531 R Poor database matches. Internal region is weakly similar to an internal region of Escherichia coli UDP-N-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase MurG SWALL:MURG_ECOLI (SWALL:P17443) (354 aa) fasta scores: E(): 2, 27.45% id in 153 aa; hypothetical protein complement(703632..704531) Burkholderia pseudomallei K96243 3091729 YP_107251.1 CDS BPSL0622 NC_006350.1 705249 705683 D Similar to Brucella melitensis hypothetical protein bmei1920 SWALL:Q8YEF8 (EMBL:AE009625) (128 aa) fasta scores: E(): 2.6e-19, 50.82% id in 122 aa, and to Rhizobium loti hypothetical protein mll1617 SWALL:Q98K65 (EMBL:AP002997) (147 aa) fasta scores: E(): 6.6e-18, 50.4% id in 123 aa. CDS is extended at the N-terminus in comparison to B. melitensis protein; hypothetical protein 705249..705683 Burkholderia pseudomallei K96243 3091730 YP_107252.1 CDS BPSL0623 NC_006350.1 705775 706740 D Similar to Streptomyces hygroscopicus acetyl-hydrolase Bah SWALL:BAH_STRHY (SWALL:Q01109) (299 aa) fasta scores: E(): 4.6e-39, 47.48% id in 278 aa, and to Ralstonia solanacearum lipase/esterase rsc0439 or rs03408 SWALL:Q8Y297 (EMBL:AL646059) (317 aa) fasta scores: E(): 3.1e-56, 53.18% id in 314 aa. CDS is extended at the N-terminus in comparison to S. hygroscopicus acetyl-hydrolase; hydrolase 705775..706740 Burkholderia pseudomallei K96243 3092112 YP_107253.1 CDS BPSL0624 NC_006350.1 706710 707624 R Similar to Pseudomonas aeruginosa staphylolytic protease preproenzyme LasA SWALL:P72166 (EMBL:U68175) (263 aa) fasta scores: E(): 1.5e-12, 39.43% id in 284 aa, and to Xanthomonas axonopodis hypothetical protein xac0112 SWALL:AAM35004 (EMBL:AE011634) (263 aa) fasta scores: E(): 8.4e-18, 45.55% id in 281 aa; protease complement(706710..707624) Burkholderia pseudomallei K96243 3092113 YP_107254.1 CDS BPSL0625 NC_006350.1 707731 709326 D Similar to Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 1.8e-31, 30.13% id in 511 aa, and to Burkholderia cepacia major facilitator superfamily transporter homologue SWALL:Q9RPH2 (EMBL:AF158699) (531 aa) fasta scores: E(): 4.2e-168, 85.31% id in 531 aa; transport protein 707731..709326 Burkholderia pseudomallei K96243 3094261 YP_107255.1 CDS BPSL0626 NC_006350.1 709375 709809 D Similar to Salmonella typhimurium multiple antibiotic resistance protein MarR SWALL:MARR_SALTY (SWALL:Q56069) (144 aa) fasta scores: E(): 0.0021, 31.35% id in 118 aa, and to Burkholderia cepacia MarR homologue SWALL:Q9RPH3 (EMBL:AF158699) (148 aa) fasta scores: E(): 3.1e-46, 81.81% id in 143 aa; MarR family transcriptional regulator 709375..709809 Burkholderia pseudomallei K96243 3094262 YP_107256.1 CDS BPSL0627 NC_006350.1 709927 710508 R Similar to Pyrococcus furiosus protease I PfpI SWALL:PFPI_PYRFU (SWALL:Q51732) (166 aa) fasta scores: E(): 2.3e-10, 33.69% id in 187 aa, and to Burkholderia cepacia hypothetical protein SWALL:Q45084 (EMBL:AF158699) (197 aa) fasta scores: E(): 1.4e-67, 91.19% id in 193 aa; peptidase complement(709927..710508) Burkholderia pseudomallei K96243 3092409 YP_107257.1 CDS BPSL0628 NC_006350.1 710658 711938 R Similar to Burkholderia cepacia D-serine deaminase Dsd SWALL:Q45085 (EMBL:AF158699) (432 aa) fasta scores: E(): 8.8e-141, 82.39% id in 426 aa, and to Ralstonia solanacearum probable D-serine deaminase rsp1185 or rs03129 SWALL:Q8XQN7 (EMBL:AL646083) (425 aa) fasta scores: E(): 8.3e-112, 66.9% id in 429 aa; hypothetical protein complement(710658..711938) Burkholderia pseudomallei K96243 3092410 YP_107258.1 CDS BPSL0629 NC_006350.1 712076 712969 D Similar to Ralstonia solanacearum hypothetical protein rsp1186 or rs03130 SWALL:Q8XQN6 (EMBL:AL646083) (289 aa) fasta scores: E(): 5.1e-60, 60.62% id in 287 aa. Weakly similar to Escherichia coli als operon repressor protein RpiR SWALL:RPIR_ECOLI (SWALL:P39266) (296 aa) fasta scores: E(): 4.5e-08, 26.31% id in 247 aa; transcriptional regulator 712076..712969 Burkholderia pseudomallei K96243 3093819 YP_107259.1 CDS dan NC_006350.1 712971 714452 D Similar to Alcaligenes xylosoxydans xylosoxydans D-aminoacylase Dan SWALL:NDAD_ALCXX (SWALL:P72349) (483 aa) fasta scores: E(): 3.8e-83, 50.95% id in 473 aa, and to Ralstonia solanacearum probable N-acyl-D-glutamate deacylase rsp1187 or rs03131 SWALL:Q8XQN5 (EMBL:AL646083) (494 aa) fasta scores: E(): 2.2e-126, 69.48% id in 485 aa; D-aminoacylase 712971..714452 Burkholderia pseudomallei K96243 3092434 YP_107260.1 CDS BPSL0631 NC_006350.1 714577 714963 D Similar to Bacillus subtilis regulator of purine biosynthesis YabJ SWALL:YABJ_BACSU (SWALL:P37552) (124 aa) fasta scores: E(): 1.2e-10, 36.52% id in 115 aa, and to Ralstonia solanacearum hypothetical protein rsp1188 or rs03132 SWALL:Q8XQN4 (EMBL:AL646083) (128 aa) fasta scores: E(): 2.9e-35, 70.63% id in 126 aa, and to Homo sapiens 14.5 kDa translational inhibitor protein PSP SWALL:UK14_HUMAN (SWALL:P52758) (137 aa) fasta scores: E(): 9.5e-11, 34.64% id in 127 aa; hypothetical protein 714577..714963 Burkholderia pseudomallei K96243 3093820 YP_107261.1 CDS queF NC_006350.1 715303 716127 R catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(715303..716127) Burkholderia pseudomallei K96243 3092289 YP_107262.1 CDS ilvA NC_006350.1 716147 717670 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(716147..717670) Burkholderia pseudomallei K96243 3092379 YP_107263.1 CDS BPSL0634 NC_006350.1 718126 722205 D Similar to Ralstonia solanacearum oxidoreductase rsc0454 or rs04446 SWALL:Q8Y282 (EMBL:AL646059) (1345 aa) fasta scores: E(): 0, 80.81% id in 1355 aa, and to Neisseria meningitidis oxidoreductase, nmb0998 SWALL:Q9JZL6 (EMBL:AE002451) (1277 aa) fasta scores: E(): 3.5e-151, 61.01% id in 1326 aa. Possible alternative translational start site; oxidoreductase 718126..722205 Burkholderia pseudomallei K96243 3092290 YP_107264.1 CDS BPSL0635 NC_006350.1 722240 722683 D Similar to Ralstonia solanacearum hypothetical protein rsc0455 or rs04445 SWALL:Q8Y281 (EMBL:AL646059) (147 aa) fasta scores: E(): 4.8e-24, 46.76% id in 139 aa, and to Pyrococcus horikoshii hypothetical protein PH1001 SWALL:O58729 (EMBL:AP000004) (150 aa) fasta scores: E(): 3.2e-10, 30.92% id in 152 aa; hypothetical protein 722240..722683 Burkholderia pseudomallei K96243 3092854 YP_107265.1 CDS BPSL0636 NC_006350.1 722680 723093 D Similar to Ralstonia solanacearum hypothetical protein rsc0457 or rs04443 SWALL:Q8Y279 (EMBL:AL646059) (138 aa) fasta scores: E(): 1.2e-33, 60.87% id in 138 aa, and to Neisseria meningitidis hypothetical protein nma0955 SWALL:Q9JV84 (EMBL:AL162754) (130 aa) fasta scores: E(): 1.9e-20, 55.75% id in 113 aa; hypothetical protein 722680..723093 Burkholderia pseudomallei K96243 3092855 YP_107266.1 CDS ubiE NC_006350.1 723141 723872 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 723141..723872 Burkholderia pseudomallei K96243 3094697 YP_107267.1 CDS BPSL0638 NC_006350.1 723962 724933 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0459 rsc0459 or rs04440 SWALL:Q8Y277 (EMBL:AL646059) (356 aa) fasta scores: E(): 2.6e-24, 52.13% id in 351 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5528 pa5528 SWALL:Q9HT45 (EMBL:AE004965) (284 aa) fasta scores: E(): 6.7e-07, 35.19% id in 304 aa; hypothetical protein 723962..724933 Burkholderia pseudomallei K96243 3091452 YP_107268.1 CDS BPSL0639 NC_006350.1 725014 725688 D Similar to Ralstonia solanacearum hypothetical protein rsc0460 or rs04439 SWALL:Q8Y276 (EMBL:AL646059) (203 aa) fasta scores: E(): 4.5e-23, 42.18% id in 211 aa, and to Xanthomonas campestris hypothetical protein xcc0223 SWALL:AAM39542 (EMBL:AE012118) (214 aa) fasta scores: E(): 6.2e-09, 30.94% id in 223 aa; hypothetical protein 725014..725688 Burkholderia pseudomallei K96243 3091453 YP_107269.1 CDS ubiB NC_006350.1 725701 727278 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 725701..727278 Burkholderia pseudomallei K96243 3093188 YP_107270.1 CDS BPSL0641 NC_006350.1 727602 728243 D Similar to Ralstonia solanacearum hypothetical protein rsc0462 or rs04436 SWALL:Q8Y274 (EMBL:AL646059) (209 aa) fasta scores: E(): 3.2e-40, 56.5% id in 200 aa. Weakly similar to Arabidopsis thaliana AT2G43920 protein SWALL:O80562 (EMBL:AC004005) (227 aa) fasta scores: E(): 1.8e-10, 28.3% id in 212 aa. CDS is extended at the N-terminus in comparison to R. solanacearum protein; hypothetical protein 727602..728243 Burkholderia pseudomallei K96243 3093189 YP_107271.1 CDS BPSL0642 NC_006350.1 728344 728685 D Similar to Ralstonia solanacearum hypothetical protein rsc0464 or rs04433 SWALL:Q8Y272 (EMBL:AL646059) (112 aa) fasta scores: E(): 1.2e-16, 63.96% id in 111 aa, and to Xanthomonas campestris hypothetical protein xcc3033 SWALL:AAM42304 (EMBL:AE012416) (99 aa) fasta scores: E(): 1.7e-07, 43.26% id in 104 aa; hypothetical protein 728344..728685 Burkholderia pseudomallei K96243 3092398 YP_107272.1 CDS BPSL0643 NC_006350.1 728756 729403 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0465 or rs04432 SWALL:Q8Y271 (EMBL:AL646059) (243 aa) fasta scores: E(): 9.8e-58, 74.17% id in 213 aa, and to Neisseria meningitidis hypothetical protein nmb0465 SWALL:Q9K0U6 (EMBL:AE002403) (233 aa) fasta scores: E(): 2.3e-32, 45.91% id in 196 aa; hypothetical protein 728756..729403 Burkholderia pseudomallei K96243 3092399 YP_107273.1 CDS aspS NC_006350.1 729466 731262 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 729466..731262 Burkholderia pseudomallei K96243 3092849 YP_107274.1 CDS ntpA NC_006350.1 731470 731946 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 731470..731946 Burkholderia pseudomallei K96243 3094352 YP_107275.1 CDS BPSL0646 NC_006350.1 731943 733217 D Similar to Ralstonia solanacearum hypothetical protein rsc0470 or rs04425 SWALL:Q8Y266 (EMBL:AL646059) (422 aa) fasta scores: E(): 6e-52, 45.25% id in 400 aa, and to the C-terminal region of Bacillus firmus cardiolipin synthetase Cls SWALL:CLS_BACFI (SWALL:O66043) (503 aa) fasta scores: E(): 2.2e-10, 28.32% id in 413 aa; phospholipase 731943..733217 Burkholderia pseudomallei K96243 3094353 YP_107276.1 CDS BPSL0647 NC_006350.1 733407 734006 D Similar to Ralstonia solanacearum transcription regulator protein rsc0472 or rs04423 SWALL:Q8Y264 (EMBL:AL646059) (213 aa) fasta scores: E(): 7.8e-60, 76.02% id in 196 aa, and to Agrobacterium tumefaciens transcriptional regulator, TetR family ATU5291 or AGR_PAT_419 SWALL:Q8UK32 (EMBL:AE008951) (221 aa) fasta scores: E(): 1.3e-14, 32.99% id in 194 aa. R. solanacearum protein is extended at the N-terminus in comparison to CDS; TetR family regulatory protein 733407..734006 Burkholderia pseudomallei K96243 3091725 YP_107277.1 CDS BPSL0648 NC_006350.1 734064 735851 D Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc0473 or rs04422 SWALL:Q8Y263 (EMBL:AL646059) (595 aa) fasta scores: E(): 1.3e-205, 81.51% id in 595 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase PA0506 SWALL:Q9I612 (EMBL:AE004487) (601 aa) fasta scores: E(): 1.3e-147, 61.2% id in 598 aa; acyl-CoA dehydrogenase oxidoreductase 734064..735851 Burkholderia pseudomallei K96243 3091726 YP_107278.1 CDS BPSL0649 NC_006350.1 736009 738444 D Similar to Ralstonia solanacearum 3-hydroxyacyl-CoA dehydrogenase oxidoreductase rsc0474 or rs04421 SWALL:Q8Y262 (EMBL:AL646059) (827 aa) fasta scores: E(): 0, 77.28% id in 810 aa. N-terminal region and to Homo sapiens short chain 3-hydroxyacyl-CoA dehydrogenase, mitochondrial precursor HADHSC or SCHAD SWALL:HCDH_HUMAN (SWALL:Q16836) (314 aa) fasta scores: E(): 1.6e-20, 34.57% id in 295 aa. R. solanacearum protein is extended at the N-terminus in comparison to CDS; 3-hydroxyacyl-CoA dehydrogenase oxidoreductase 736009..738444 Burkholderia pseudomallei K96243 3094624 YP_107279.1 CDS BPSL0650 NC_006350.1 738624 739823 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 738624..739823 Burkholderia pseudomallei K96243 3094625 YP_107280.1 CDS BPSL0651 NC_006350.1 739918 740682 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 739918..740682 Burkholderia pseudomallei K96243 3091688 YP_107281.1 CDS BPSL0652 NC_006350.1 740796 741620 R Similar to Alcaligenes eutrophus fdhD protein FdhD or FdsC SWALL:FDHD_ALCEU (SWALL:O87816) (288 aa) fasta scores: E(): 6e-39, 48.12% id in 266 aa, and to Ralstonia solanacearum probable formate dehydrogenase associated protein rsp1050 or rs02387 SWALL:Q8XR18 (EMBL:AL646082) (273 aa) fasta scores: E(): 2.5e-41, 49.62% id in 266 aa; formate dehydrogenase subunit delta complement(740796..741620) Burkholderia pseudomallei K96243 3091689 YP_107282.1 CDS BPSL0653 NC_006350.1 741755 742234 D Similar to Anabaena sp. hypothetical protein ALR0614 SWALL:Q8YZ73 (EMBL:AP003583) (153 aa) fasta scores: E(): 3.5e-11, 29.53% id in 149 aa, and to Synechocystis sp. hypothetical protein SLL1455 SWALL:P73447 (EMBL:D90906) (155 aa) fasta scores: E(): 8e-10, 28.75% id in 153 aa; hypothetical protein 741755..742234 Burkholderia pseudomallei K96243 3092116 YP_107283.1 CDS BPSL0654 NC_006350.1 742279 742692 R Similar to Ralstonia solanacearum hypothetical protein rsc0477 or rs04418 SWALL:Q8Y259 (EMBL:AL646059) (139 aa) fasta scores: E(): 2.3e-34, 78.12% id in 128 aa, and to Escherichia coli acyl-CoA thioester hydrolase YciA or b1253 SWALL:YCIA_ECOLI (SWALL:P04379) (132 aa) fasta scores: E(): 1.3e-16, 43.54% id in 124 aa; thioesterase superfamily protein complement(742279..742692) Burkholderia pseudomallei K96243 3092117 YP_107284.1 CDS BPSL0655 NC_006350.1 742999 744870 D Similar to the C-terminal region of Homo sapiens ATP-binding cassette transporter 7, mitochondrial precursor ABCB7 or ABC7 SWALL:ABC7_HUMAN (SWALL:O75027) (752 aa) fasta scores: E(): 6.1e-95, 47.55% id in 614 aa, and to the full length Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc0478 or rs04417 SWALL:Q8Y258 (EMBL:AL646059) (592 aa) fasta scores: E(): 6.9e-141, 73.98% id in 592 aa. Similar to BPSS2259, 51.007% identity (53.427% ungapped) in 596 aa overlap. CDS is extended at the N-terminus in comparison to R. solanacearum protein; ATP-binding transmembrane ABC transporter protein 742999..744870 Burkholderia pseudomallei K96243 3092132 YP_107285.1 CDS BPSL0656 NC_006350.1 745363 746082 R Similar to Ralstonia solanacearum mannose-1-phosphate guanyltransferase-related protein rsc0511 or rs04996 SWALL:Q8Y225 (EMBL:AL646059) (241 aa) fasta scores: E(): 3.2e-58, 70.08% id in 234 aaWeakly similar to Streptomyces griseus glucose-1-phosphate thymidylyltransferase StrD SWALL:STRD_STRGR (SWALL:P08075) (355 aa) fasta scores: E(): 9.8e-09, 26.16% id in 237 aa; nucleotidyl transferase complement(745363..746082) Burkholderia pseudomallei K96243 3092133 YP_107286.1 CDS BPSL0657 NC_006350.1 746086 747120 R Similar to Ralstonia solanacearum hypothetical protein rsc0514 or rs04986 SWALL:Q8Y222 (EMBL:AL646059) (352 aa) fasta scores: E(): 3.9e-76, 59.3% id in 344 aa, and to Pseudomonas aeruginosa hypothetical protein SWALL:Q9X4N9 (EMBL:AF116284) (338 aa) fasta scores: E(): 1.5e-56, 47.23% id in 343 aa; hypothetical protein complement(746086..747120) Burkholderia pseudomallei K96243 3091651 YP_107287.1 CDS BPSL0658 NC_006350.1 747333 749696 D Similar to Ralstonia solanacearum probable organic solvent tolerance transmembrane protein rsc0515 or rs04980 SWALL:Q8Y221 (EMBL:AL646059) (811 aa) fasta scores: E(): 1.7e-126, 43.28% id in 811 aa. Weakly similar to Escherichia coli organic solvent tolerance protein precursor Imp or OstA SWALL:OSTA_ECOLI (SWALL:P31554) (784 aa) fasta scores: E(): 6.6e-18, 28.08% id in 794 aa; hypothetical protein 747333..749696 Burkholderia pseudomallei K96243 3091652 YP_107288.1 CDS BPSL0659 NC_006350.1 749757 751109 D Similar to Escherichia coli survival protein (peptidyl-prolyl cis-trans isomerase) SurA SWALL:SURA_ECOLI (SWALL:P21202) (428 aa) fasta scores: E(): 2.1e-35, 32.93% id in 413 aa, and to Ralstonia solanacearum probable peptidyl-prolyl cis-trans isomerase rsc0516 or rs04977 SWALL:Q8Y220 (EMBL:AL646059) (498 aa) fasta scores: E(): 8.2e-61, 44.49% id in 427 aa. R. solanacearum is extended at the N-terminus in comparison to CDS; peptidyl-prolyl cis-trans isomerase 749757..751109 Burkholderia pseudomallei K96243 3094814 YP_107289.1 CDS pdxA NC_006350.1 751131 752180 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 751131..752180 Burkholderia pseudomallei K96243 3094225 YP_107290.1 CDS ksgA NC_006350.1 752212 753039 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 752212..753039 Burkholderia pseudomallei K96243 3091449 YP_107291.1 CDS BPSL0662 NC_006350.1 753301 754239 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0519 or rs04969 SWALL:Q8Y218 (EMBL:AL646059) (301 aa) fasta scores: E(): 2.8e-62, 60.59% id in 302 aa, and to Pseudomonas aeruginosa hypothetical protein pa1411 SWALL:Q9I3T3 (EMBL:AE004570) (303 aa) fasta scores: E(): 2.2e-47, 51.86% id in 295 aa; hypothetical protein complement(753301..754239) Burkholderia pseudomallei K96243 3094815 YP_107292.1 CDS gloA NC_006350.1 754617 755006 D Similar to Neisseria meningitidis lactoylglutathione lyase GloA SWALL:LGUL_NEIMA (SWALL:O33393) (138 aa) fasta scores: E(): 1.4e-39, 75% id in 128 aa, and to Pseudomonas aeruginosa lactoylglutathione lyase PA3524 SWALL:Q9HY85 (EMBL:AE004773) (128 aa) fasta scores: E(): 6.3e-38, 71.87% id in 128 aa; lactoylglutathione lyase 754617..755006 Burkholderia pseudomallei K96243 3092375 YP_107293.1 CDS BPSL0664 NC_006350.1 755219 756064 R Similar to Ralstonia solanacearum hypothetical protein rsc0521 or rs06095 SWALL:Q8Y216 (EMBL:AL646059) (288 aa) fasta scores: E(): 1.7e-59, 65.7% id in 277 aa, and to the C-terminal region of Agrobacterium tumefaciens hypothetical protein ATU0016 or AGR_C_25 SWALL:Q8UJB2 (EMBL:AE008976) (255 aa) fasta scores: E(): 1.5e-12, 29.36% id in 252 aa. CDS is extended at the N-terminus in comparison to many orthologues; hypothetical protein complement(755219..756064) Burkholderia pseudomallei K96243 3093196 YP_107294.1 CDS BPSL0665 NC_006350.1 756145 756924 R Similar to Ralstonia solanacearum acyltransferase transmembrane protein rsc0522 or rs04959 SWALL:Q8Y215 (EMBL:AL646059) (250 aa) fasta scores: E(): 9.8e-67, 65.59% id in 250 aa, and to Pseudomonas aeruginosa probable acyltransferase pa0005 SWALL:Q9I7C1 (EMBL:AE004440) (257 aa) fasta scores: E(): 6.3e-40, 43.8% id in 242 aa, and to Pseudomonas fluorescens N-acylhomoserine lactone synthase HdtS SWALL:Q9F728 (EMBL:AF286536) (259 aa) fasta scores: E(): 3.2e-37, 40.58% id in 239 aa; acyltransferase complement(756145..756924) Burkholderia pseudomallei K96243 3093197 YP_107295.1 CDS BPSL0666 NC_006350.1 756967 757530 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(756967..757530) Burkholderia pseudomallei K96243 3092787 YP_107296.1 CDS glyS NC_006350.1 757548 759647 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(757548..759647) Burkholderia pseudomallei K96243 3092164 YP_107297.1 CDS glyQ NC_006350.1 759664 760671 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(759664..760671) Burkholderia pseudomallei K96243 3094758 YP_107298.1 CDS lnt NC_006350.1 760927 762633 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(760927..762633) Burkholderia pseudomallei K96243 3092788 YP_107299.1 CDS BPSL0670 NC_006350.1 762676 763563 R Similar to Salmonella typhimurium, and Salmonella typhi magnesium and cobalt efflux protein CorC or stm0667 or sty0712 SWALL:CORC_SALTY (SWALL:Q9R874) (292 aa) fasta scores: E(): 9.1e-41, 42.9% id in 289 aa, and to Ralstonia solanacearum hypothetical protein rsc0528 or rs04940 SWALL:Q8Y209 (EMBL:AL646059) (298 aa) fasta scores: E(): 1e-83, 77.43% id in 288 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3983 pa3983 SWALL:Q9HX36 (EMBL:AE004816) (279 aa) fasta scores: E(): 2.4e-53, 53.02% id in 281 aa; cation transporter efflux protein complement(762676..763563) Burkholderia pseudomallei K96243 3093851 YP_107300.1 CDS BPSL0671 NC_006350.1 764076 764708 R Similar to Ralstonia solanacearum hypothetical protein rsc0782 or rs05056 SWALL:Q8Y1A8 (EMBL:AL646061) (248 aa) fasta scores: E(): 8.4e-32, 47.8% id in 205 aa; limited homology to cation transporters; hypothetical protein complement(764076..764708) Burkholderia pseudomallei K96243 3093852 YP_107301.2 CDS BPSL0672 NC_006350.1 764729 765541 R contains unknown N-terminal domain/ metalloprotease C-terminal domain; unkown domain/ metalloprotease fusion protein complement(764729..765541) Burkholderia pseudomallei K96243 3093081 YP_107302.1 CDS BPSL0673 NC_006350.1 766175 767239 R Similar to Escherichia coli, and Escherichia coli O157:H7 phoH-like protein ybeZ or b0660 or z0809 or ecs0698 SWALL:PHOL_ECOLI (SWALL:P77349) (359 aa) fasta scores: E(): 1.3e-51, 53.46% id in 346 aa, and to Ralstonia solanacearum probable phoH-like protein rsc0530 or rs04938 SWALL:Q8Y207 (EMBL:AL646059) (325 aa) fasta scores: E(): 7.4e-72, 74.93% id in 355 aa, and to Neisseria meningitidis hypothetical protein Nma1056 nma1056 SWALL:Q9JV06 (EMBL:AL162755) (317 aa) fasta scores: E(): 1.7e-53, 54.14% id in 338 aa; PhoH-family protein complement(766175..767239) Burkholderia pseudomallei K96243 3093082 YP_107303.1 CDS miaB NC_006350.1 767263 768636 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(767263..768636) Burkholderia pseudomallei K96243 3093127 YP_107304.1 CDS BPSL0675 NC_006350.1 769122 770054 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3565 SWALL:Q9HY52 (EMBL:AE004777) (306 aa) fasta scores: E(): 9.4e-41, 40.41% id in 287 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0997 or rs02329 SWALL:Q8XR64 (EMBL:AL646082) (306 aa) fasta scores: E(): 3.7e-38, 37.71% id in 289 aa, and to Vibrio cholerae transcriptional regulator, lysR family vca0635 SWALL:Q9KLV6 (EMBL:AE004393) (313 aa) fasta scores: E(): 9e-35, 35.93% id in 295 aa; LysR family transcriptional regulator complement(769122..770054) Burkholderia pseudomallei K96243 3092721 YP_107305.1 CDS BPSL0676 NC_006350.1 770200 771372 D Similar to Streptomyces coelicolor transmembrane efflux protein sco3915 or sch24.37 SWALL:Q9X8V1 (EMBL:AL049826) (404 aa) fasta scores: E(): 8.4e-76, 57.58% id in 389 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4355 SWALL:Q9HW46 (EMBL:AE004851) (388 aa) fasta scores: E(): 1.1e-73, 56.18% id in 388 aa, and to Rhizobium loti transmembrane efflux protein mlr2770 SWALL:Q98HP8 (EMBL:AP003000) (391 aa) fasta scores: E(): 4.7e-73, 56.12% id in 392 aa; transmembrane transporter protein 770200..771372 Burkholderia pseudomallei K96243 3092722 YP_107306.1 CDS BPSL0677 NC_006350.1 771506 772174 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2312 SWALL:Q9I1G3 (EMBL:AE004657) (193 aa) fasta scores: E(): 4.4e-32, 56.98% id in 186 aa, and to Streptomyces coelicolor transcriptional regulatory protein sco1312 or scbac36f5.23C SWALL:Q93IV8 (EMBL:AL592292) (201 aa) fasta scores: E(): 1.2e-11, 34.37% id in 192 aa, and to Bacillus halodurans hypothetical protein Bh2909 bh2909 SWALL:Q9K8U3 (EMBL:AP001517) (189 aa) fasta scores: E(): 2.4e-10, 31.18% id in 186 aa; DNA binding protein 771506..772174 Burkholderia pseudomallei K96243 3094245 YP_107307.1 CDS ribB NC_006350.1 772598 773320 D Similar to Escherichia coli, and Escherichia coli O157:H7 3,4-dihydroxy-2-butanone 4-phosphate synthase ribB or htrP or b3041 or z4399 or ecs3929 SWALL:RIBB_ECOLI (SWALL:P24199) (217 aa) fasta scores: E(): 7.7e-44, 61.03% id in 213 aa, and to Ralstonia solanacearum probable 3,4-dihydroxy-2-butanone 4-phosphate synthase ribB or rsp1191 or rs04751 SWALL:Q8XQN1 (EMBL:AL646083) (227 aa) fasta scores: E(): 1.9e-50, 65.47% id in 223 aa, and to Vibrio cholerae 3,4-dihydroxy-2-butanone 4-phosphate synthase vca1060 SWALL:Q9KKP2 (EMBL:AE004431) (218 aa) fasta scores: E(): 2.8e-45, 63.5% id in 200 aa; 3,4-dihydroxy-2-butanone 4-phosphate synthase 772598..773320 Burkholderia pseudomallei K96243 3092772 YP_107308.1 CDS BPSL0679 NC_006350.1 773388 774074 R Similar to Pseudomonas aeruginosa probable hydrolase pa0562 SWALL:Q9I5X4 (EMBL:AE004492) (224 aa) fasta scores: E(): 9.9e-33, 49.06% id in 214 aa, and to Xanthomonas campestris hydrolase xcc2720 SWALL:AAM41992 (EMBL:AE012385) (225 aa) fasta scores: E(): 1.8e-32, 49.52% id in 212 aa, and to Xanthomonas axonopodis hydrolase xac2883 SWALL:AAM37728 (EMBL:AE011930) (225 aa) fasta scores: E(): 2.3e-32, 48.57% id in 210 aa; hydrolase complement(773388..774074) Burkholderia pseudomallei K96243 3094246 YP_107309.1 CDS BPSL0680 NC_006350.1 774204 775058 R Similar to Deinococcus radiodurans hypothetical protein Dr2437 SWALL:Q9RRQ1 (EMBL:AE002073) (278 aa) fasta scores: E(): 3.9e-10, 29.85% id in 278 aa, and to Streptomyces coelicolor integral membrane protein sco1313 or scbac36f5.24 SWALL:Q93IV7 (EMBL:AL592292) (285 aa) fasta scores: E(): 1.3e-07, 27.91% id in 283 aa; hypothetical protein complement(774204..775058) Burkholderia pseudomallei K96243 3093650 YP_107310.1 CDS BPSL0681 NC_006350.1 775147 776373 R Similar to Streptomyces coelicolor hypothetical protein Sco0993 or 2scg2.06 SWALL:Q9EX45 (EMBL:AL445963) (412 aa) fasta scores: E(): 6.2e-16, 28.35% id in 402 aa, and to Rhizobium loti fusion protein contains ligase and probable arginosuccinate lyase msi203 SWALL:CAD31608 (EMBL:AL672113) (899 aa) fasta scores: E(): 1e-15, 26.36% id in 421 aa, and to Rhizobium loti hypothetical protein Mll5963 mll5963 SWALL:Q98AK8 (EMBL:AP003008) (408 aa) fasta scores: E(): 1.4e-15, 28.3% id in 325 aa; hypothetical protein complement(775147..776373) Burkholderia pseudomallei K96243 3093651 YP_107311.1 CDS BPSL0682 NC_006350.1 776411 777943 R glutamine-hydrolyzing; Similar to Escherichia coli asparagine synthetase B [glutamine-hydrolyzing] asnB or b0674 SWALL:ASNB_ECOLI (SWALL:P22106) (553 aa) fasta scores: E(): 7.9e-21, 32.63% id in 524 aa, and to Lactococcus lactis asparagine synthetase B asnB or ll0352 SWALL:Q9CIK5 (EMBL:AE006272) (530 aa) fasta scores: E(): 4.7e-30, 30.04% id in 476 aa, and to Caenorhabditis elegans M02d8.4 protein m02d8.4 SWALL:Q21463 (EMBL:U41034) (567 aa) fasta scores: E(): 6e-28, 30.66% id in 525 aa; asparagine synthetase B complement(776411..777943) Burkholderia pseudomallei K96243 3094477 YP_107312.1 CDS BPSL0683 NC_006350.1 777987 779342 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(777987..779342) Burkholderia pseudomallei K96243 3094478 YP_107313.1 CDS BPSL0684 NC_006350.1 779381 780688 R Similar to Pseudomonas sp. 3-phosphoshikimate 1-carboxyvinyltransferase aroA SWALL:AROA_PSES2 (SWALL:P56952) (449 aa) fasta scores: E(): 6.6e-08, 22.39% id in 460 aa, and to Methanosarcina mazei 3-phosphoshikimate 1-carboxyvinyltransferase mm1238 SWALL:AAM30934 (EMBL:AE013354) (430 aa) fasta scores: E(): 2.8e-14, 24.88% id in 442 aa, and to Methanosarcina acetivorans 3-phosphoshikimate 1-carboxyvinyltransferase aroa or ma4544 SWALL:Q8THH3 (EMBL:AE011175) (430 aa) fasta scores: E(): 2.9e-13, 25.57% id in 438 aa; 3-phosphoskimimate 1-carboxyvinyltransferase complement(779381..780688) Burkholderia pseudomallei K96243 3093000 YP_107314.1 CDS BPSL0685 NC_006350.1 780710 781132 R Similar to Deinococcus radiodurans hypothetical protein Dr0033 SWALL:Q9RYB7 (EMBL:AE001867) (157 aa) fasta scores: E(): 5.1e-13, 41.6% id in 125 aa, and to Mycobacterium tuberculosis hypothetical protein Rv2704 rv2704 or mtcy05a6.25 or mt2777.1 SWALL:O07205 (EMBL:Z96072) (142 aa) fasta scores: E(): 1.4e-07, 35.93% id in 128 aa, and to Streptomyces coelicolor hypothetical protein sco2049 or sc4g6.18C SWALL:YK49_STRCO (SWALL:P16251) (134 aa) fasta scores: E(): 1.8e-07, 31.78% id in 129 aa; hypothetical protein complement(780710..781132) Burkholderia pseudomallei K96243 3093001 YP_107315.1 CDS glpF NC_006350.1 782049 782765 R Similar to Thermus aquaticus glycerol facilitator glpF SWALL:Q93RA7 (EMBL:AB053202) (272 aa) fasta scores: E(): 7e-43, 50.64% id in 231 aa, and to Thermotoga maritima probable glycerol uptake facilitator protein GlpF or tm1429 SWALL:GLPF_THEMA (SWALL:Q9X1E3) (234 aa) fasta scores: E(): 1.1e-50, 56.83% id in 234 aa, and to Thermoanaerobacter tengcongensis glycerol uptake facilitator and related permeases GlpF or tte2003 SWALL:Q8R5R1 (EMBL:AE013151) (242 aa) fasta scores: E(): 2.3e-45, 52.11% id in 236 aa; glycerol uptake facilitator protein complement(782049..782765) Burkholderia pseudomallei K96243 3093044 YP_107316.1 CDS glpK NC_006350.1 782878 784380 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(782878..784380) Burkholderia pseudomallei K96243 3092942 YP_107317.1 CDS glpD NC_006350.1 784486 786018 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(784486..786018) Burkholderia pseudomallei K96243 3093043 YP_107318.1 CDS BPSL0689 NC_006350.1 786186 786557 D hypothetical protein 786186..786557 Burkholderia pseudomallei K96243 3094507 YP_107319.1 CDS BPSL0690 NC_006350.1 786624 786833 R hypothetical protein complement(786624..786833) Burkholderia pseudomallei K96243 3094508 YP_107320.1 CDS glpR NC_006350.1 787140 787976 R Similar to Pseudomonas aeruginosa glycerol-3-phosphate regulon repressor GlpR or pa3583 SWALL:GLPR_PSEAE (SWALL:Q51391) (251 aa) fasta scores: E(): 7.8e-46, 52.45% id in 244 aa, and to Xanthomonas axonopodis glycerol-3-phosphate regulon repressor GlpR or xac0361 SWALL:AAM35253 (EMBL:AE011662) (256 aa) fasta scores: E(): 1.1e-53, 58.16% id in 251 aa, and to Xanthomonas campestris glycerol-3-phosphate regulon repressor glpR or xcc0361 SWALL:AAM39680 (EMBL:AE012132) (259 aa) fasta scores: E(): 9.5e-53, 56.29% id in 254 aa; DeoR family glycerol-3-phosphate regulon repressor complement(787140..787976) Burkholderia pseudomallei K96243 3092943 YP_107321.1 CDS BPSL0692 NC_006350.1 788147 789820 D Similar to Ralstonia solanacearum gamma-glutamyltranspeptidase rsc2501 or rs01094 SWALL:Q8XWH3 (EMBL:AL646070) (552 aa) fasta scores: E(): 8.6e-156, 70.73% id in 557 aa, and to Deinococcus radiodurans cephalosporin acylase dr1524 SWALL:Q9RU70 (EMBL:AE001996) (535 aa) fasta scores: E(): 5.2e-90, 50.64% id in 547 aa, and to Bacillus halodurans cephalosporin acylase bh0867 SWALL:Q9KEI5 (EMBL:AP001510) (539 aa) fasta scores: E(): 3.7e-89, 49.36% id in 547 aa; possible alternative start site at codon 4; gamma-glutamyltransferase 2 788147..789820 Burkholderia pseudomallei K96243 3091752 YP_107322.1 CDS BPSL0693 NC_006350.1 790123 790956 D Similar to Ralstonia solanacearum hypothetical protein Rsc3135 or rs00468 SWALL:Q8XUQ1 (EMBL:AL646073) (284 aa) fasta scores: E(): 1.8e-54, 52.19% id in 274 aa; hypothetical protein 790123..790956 Burkholderia pseudomallei K96243 3091753 YP_107323.1 CDS BPSL0694 NC_006350.1 791026 791526 D hypothetical protein 791026..791526 Burkholderia pseudomallei K96243 3092944 YP_107324.1 CDS rhlE1 NC_006350.1 791664 793121 R Similar to Escherichia coli ATP-dependent RNA helicase RhlE or b0797 SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): 7.1e-85, 64.73% id in 465 aa, and to Ralstonia solanacearum probable ATP-dependent RNA helicase rhlE1 or rsc0539 or rs06096 SWALL:Q8Y1Z8 (EMBL:AL646059) (540 aa) fasta scores: E(): 3.1e-97, 68.07% id in 498 aa; ATP-dependent RNA helicase 1 complement(791664..793121) Burkholderia pseudomallei K96243 3093147 YP_107325.1 CDS BPSL0696 NC_006350.1 793249 794547 R Similar to Acetobacter europaeus cytochrome c precursor AldF SWALL:O30327 (EMBL:Y08696) (444 aa) fasta scores: E(): 1.9e-44, 36.43% id in 398 aa, and to Pseudomonas aeruginosa probable c-type cytochrome pa4619 SWALL:Q9HVH2 (EMBL:AE004876) (415 aa) fasta scores: E(): 2.9e-55, 39.57% id in 427 aa, and to Pseudomonas aeruginosa probable cytochrome c pa4571 SWALL:Q9HVL3 (EMBL:AE004870) (675 aa) fasta scores: E(): 1.9e-49, 38.69% id in 398 aa; periplasmic cytochrome c containing protein complement(793249..794547) Burkholderia pseudomallei K96243 3092945 YP_107326.1 CDS BPSL0697 NC_006350.1 794567 795328 R Similar to Thiobacillus ferrooxidans cytochrome c-552 precursor Cyc1 SWALL:C552_THIFE (SWALL:P74917) (230 aa) fasta scores: E(): 3.5e-07, 26.63% id in 229 aa, and to Pseudomonas aeruginosa probable cytochrome c pa2482 SWALL:Q9I100 (EMBL:AE004676) (217 aa) fasta scores: E(): 3.4e-15, 37.05% id in 170 aa, and to Ralstonia solanacearum cytochrome c signal peptide protein rsc0197 or rs00629 SWALL:Q8Y2Y4 (EMBL:AL646058) (206 aa) fasta scores: E(): 6.3e-14, 37.71% id in 175 aa; periplasmic cytochrome c protein complement(794567..795328) Burkholderia pseudomallei K96243 3092201 YP_107327.1 CDS BPSL0698 NC_006350.1 795753 796679 D Similar to Pseudomonas syringae copper resistance protein D copD SWALL:COPD_PSESF (SWALL:Q9KWM8) (311 aa) fasta scores: E(): 1.7e-06, 30.41% id in 263 aa, and to Ralstonia solanacearum probable copper resistance D transmembrane protein copD or rsp0659 or rs01790 SWALL:Q8XS22 (EMBL:AL646080) (309 aa) fasta scores: E(): 4.6e-08, 31.69% id in 306 aa, and to Xanthomonas campestris juglandis copper-resistance genes SWALL:Q56798 (EMBL:L19222) (307 aa) fasta scores: E(): 1.2e-06, 28.62% id in 283 aa; transmembrane transporter protein 795753..796679 Burkholderia pseudomallei K96243 3092202 YP_107328.1 CDS BPSL0699 NC_006350.1 797270 798418 R Similar to Rhizobium meliloti probable galactonate dehydratase dgoA or rb0492 or smb20510 SWALL:Q92W53 (EMBL:AL603643) (382 aa) fasta scores: E(): 3.3e-125, 78.27% id in 382 aa, and to Ralstonia solanacearum galactonate dehydratase dgoAB or rsc2751 or rs00103 SWALL:Q8XVS8 (EMBL:AL646071) (382 aa) fasta scores: E(): 4e-101, 64.92% id in 382 aa; galactonate dehydratase complement(797270..798418) Burkholderia pseudomallei K96243 3093666 YP_107329.1 CDS BPSL0700 NC_006350.1 798874 799221 D Similar to Ralstonia solanacearum hypothetical protein Rsc3305 or rs02534 SWALL:Q8XU88 (EMBL:AL646074) (115 aa) fasta scores: E(): 4.9e-32, 63.15% id in 114 aa, and to Agrobacterium tumefaciens hypothetical protein atu2404 atu2404 or agr_c_4363 SWALL:Q8UCS9 (EMBL:AE009188) (118 aa) fasta scores: E(): 5e-21, 50.89% id in 112 aa, and to Xanthomonas axonopodis hypothetical protein Xac2795 xac2795 SWALL:AAM37640 (EMBL:AE011920) (132 aa) fasta scores: E(): 3.8e-19, 47.82% id in 115 aa; hypothetical protein 798874..799221 Burkholderia pseudomallei K96243 3093667 YP_107330.1 CDS BPSL0701 NC_006350.1 799353 799808 R hypothetical protein complement(799353..799808) Burkholderia pseudomallei K96243 3094054 YP_107331.1 CDS BPSL0702 NC_006350.1 800104 801786 D Similar to Mycobacterium tuberculosis hypothetical protein rv2577 or mt2654 or mtcy227.24C SWALL:YP77_MYCTU (SWALL:Q50644) (529 aa) fasta scores: E(): 1.5e-17, 39.55% id in 579 aa, and to Aspergillus ficuum acid phosphatase precursor aphA SWALL:Q12546 (EMBL:U18553) (614 aa) fasta scores: E(): 1.9e-06, 29.41% id in 204 aa, and to Lupinus albus acid phosphatase SWALL:Q9XJ24 (EMBL:AB023385) (638 aa) fasta scores: E(): 3.4e-06, 25.4% id in 370 aa; calcineurin-like phosphoesterase 800104..801786 Burkholderia pseudomallei K96243 3094055 YP_107332.1 CDS BPSL0703 NC_006350.1 801764 803647 R Similar to Xanthomonas campestris histidine kinase xcc1957 SWALL:AAM41246 (EMBL:AE012299) (408 aa) fasta scores: E(): 1.1e-42, 50.16% id in 297 aa, and to Xanthomonas axonopodis histidine kinase xac1991 SWALL:AAM36853 (EMBL:AE011834) (408 aa) fasta scores: E(): 1.3e-42, 49.49% id in 297 aa, and to Pseudomonas aeruginosa probable two-component sensor pa2571 SWALL:Q9I0R5 (EMBL:AE004685) (470 aa) fasta scores: E(): 1.4e-42, 46.93% id in 326 aa; two-component sensor histidine kinase complement(801764..803647) Burkholderia pseudomallei K96243 3093006 YP_107333.1 CDS BPSL0704 NC_006350.1 803697 805016 R Similar to Pseudomonas aeruginosa probable two-component response regulator pa2572 SWALL:Q9I0R4 (EMBL:AE004685) (447 aa) fasta scores: E(): 2.9e-47, 36.94% id in 425 aa, and to Vibrio cholerae response regulator vc1087 SWALL:Q9KT18 (EMBL:AE004189) (447 aa) fasta scores: E(): 9.8e-19, 32.33% id in 436 aa, and to Spirulina platensis adenylate cyclase cyaC SWALL:O32393 (EMBL:D49692) (1202 aa) fasta scores: E(): 4.7e-17, 38.02% id in 192 aa; two-component response regulator protein complement(803697..805016) Burkholderia pseudomallei K96243 3093007 YP_107334.1 CDS BPSL0705 NC_006350.1 805804 806385 D Weakly similar to Pseudomonas aeruginosa hypothetical protein Pa2134 SWALL:Q9I1Y1 (EMBL:AE004641) (190 aa) fasta scores: E(): 0.002, 29.6% id in 152 aa; hits of low significance in the databases; alternative start site at codon 45; hypothetical protein 805804..806385 Burkholderia pseudomallei K96243 3092324 YP_107335.1 CDS BPSL0706 NC_006350.1 806553 808304 R Similar to Escherichia coli aerotaxis receptor aer or air or b3072 SWALL:AER_ECOLI (SWALL:P50466) (506 aa) fasta scores: E(): 1.1e-73, 47.48% id in 516 aa, and to Ralstonia solanacearum probable aerotaxis sensor receptor aer or rsp1224 or rs03168 SWALL:Q8XQK0 (EMBL:AL646083) (514 aa) fasta scores: E(): 1.3e-103, 61.5% id in 517 aa, and to Yersinia pestis methyl-accepting chemotaxis protein ypo1644 SWALL:Q8ZFP9 (EMBL:AJ414149) (526 aa) fasta scores: E(): 1e-86, 53.17% id in 519 aa; aerotaxis sensor receptor complement(806553..808304) Burkholderia pseudomallei K96243 3092325 YP_107336.1 CDS BPSL0707 NC_006350.1 809196 810956 R Similar to Burkholderia cepacia cholesterol oxidase ChoS SWALL:Q93RE1 (EMBL:AB051407) (582 aa) fasta scores: E(): 6.7e-158, 66.83% id in 579 aa, and to Pseudomonas aeruginosa hypothetical protein PA4140 SWALL:Q9HWP1 (EMBL:AE004830) (597 aa) fasta scores: E(): 4.3e-132, 56.02% id in 589 aa; hypothetical protein complement(809196..810956) Burkholderia pseudomallei K96243 3092061 YP_107337.1 CDS BPSL0709 NC_006350.1 811759 812583 D Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo2497 SWALL:Q8ZDQ9 (EMBL:AJ414152) (313 aa) fasta scores: E(): 1e-29, 39.68% id in 257 aa, and to Escherichia coli O157:H7 transcriptional regulator lysR-type yeaT or z2842 or ecs2508 SWALL:Q8XDS5 (EMBL:AE005402) (314 aa) fasta scores: E(): 5.7e-29, 40.66% id in 241 aa, and to Escherichia coli hypothetical transcriptional regulator YeaT yeaT or b1799 SWALL:YEAT_ECOLI (SWALL:P76250) (307 aa) fasta scores: E(): 1.8e-28, 40.24% id in 241 aa; LysR family transcriptional regulator 811759..812583 Burkholderia pseudomallei K96243 3094848 YP_107338.1 CDS BPSL0710 NC_006350.1 812633 813712 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 812633..813712 Burkholderia pseudomallei K96243 3094849 YP_107339.1 CDS BPSL0711 NC_006350.1 814099 814437 R hypothetical protein complement(814099..814437) Burkholderia pseudomallei K96243 3092608 YP_107340.1 CDS BPSL0712 NC_006350.1 814656 816029 R Similar to Xylella fastidiosa nitrate ABC transporter ATP-binding protein xf0412 SWALL:Q9PG90 (EMBL:AE003892) (433 aa) fasta scores: E(): 1.2e-69, 52.6% id in 422 aa, and to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc3372 or rs02647 SWALL:Q8XU22 (EMBL:AL646075) (449 aa) fasta scores: E(): 1.1e-57, 47.87% id in 424 aa, and to Pyrobaculum aerophilum taurine pae1066 SWALL:Q8ZXW3 (EMBL:AE009801) (254 aa) fasta scores: E(): 3.3e-31, 47.76% id in 224 aa; ATP-binding transmembrane ABC transporter complement(814656..816029) Burkholderia pseudomallei K96243 3092609 YP_107341.1 CDS BPSL0713 NC_006350.1 816038 817771 R Similar to Xylella fastidiosa ABC transporter nitrate permease xf0411 SWALL:Q9PG91 (EMBL:AE003892) (584 aa) fasta scores: E(): 2.1e-123, 58.31% id in 583 aa, and to Ralstonia solanacearum transmembrane ABC transporter protein rsc3371 or rs02646 SWALL:Q8XU23 (EMBL:AL646075) (586 aa) fasta scores: E(): 9.6e-115, 54.85% id in 556 aa, and to Sulfolobus solfataricus ABC transporter sso2468 SWALL:Q97VY5 (EMBL:AE006845) (535 aa) fasta scores: E(): 1.6e-24, 24.09% id in 527 aa; transmembrane transporter complement(816038..817771) Burkholderia pseudomallei K96243 3094786 YP_107342.1 CDS BPSL0716 NC_006350.1 819482 820171 D Similar to Methanosarcina mazei hypothetical protein Mm1779 SWALL:AAM31475 (EMBL:AE013414) (226 aa) fasta scores: E(): 4.3e-41, 57.27% id in 213 aa, and to Mycobacterium tuberculosis hypothetical protein rv0571c rv0571c or mt0597 or mtv039.09C SWALL:O53768 (EMBL:AL021942) (451 aa) fasta scores: E(): 4.9e-40, 60.27% id in 219 aa, and to Agrobacterium tumefaciens hypothetical protein atu3651 atu3651 or agr_l_2363 SWALL:Q8U9S4 (EMBL:AE009293) (288 aa) fasta scores: E(): 3.2e-05, 31.13% id in 212 aa; hypothetical protein 819482..820171 Burkholderia pseudomallei K96243 3094038 YP_107343.1 CDS BPSL0717 NC_006350.1 820168 821523 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 820168..821523 Burkholderia pseudomallei K96243 3094039 YP_107344.1 CDS BPSL0718 NC_006350.1 821674 822381 D Similar to Anabaena sp. hypothetical protein All1995 all1995 SWALL:Q8YVI3 (EMBL:AP003587) (221 aa) fasta scores: E(): 5.2e-36, 52.8% id in 214 aa, and to Methanosarcina mazei hypothetical protein Mm1780 mm1780 SWALL:AAM31476 (EMBL:AE013414) (221 aa) fasta scores: E(): 2.3e-35, 50.47% id in 212 aa, and to Mycobacterium tuberculosis DNA sequence SWALL:Q50819 (EMBL:M93129) (385 aa) fasta scores: E(): 4e-34, 48.14% id in 243 aa; phosphoribosyl transferase 821674..822381 Burkholderia pseudomallei K96243 3093079 YP_107345.1 CDS BPSL0719 NC_006350.1 822429 825545 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1476 or rs03830 SWALL:Q8XZC5 (EMBL:AL646064) (1035 aa) fasta scores: E(): 1.5e-175, 47.73% id in 1014 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0788 pa0788 SWALL:Q9I5F0 (EMBL:AE004513) (1041 aa) fasta scores: E(): 1.1e-164, 46.06% id in 990 aa, and to Vibrio cholerae hypothetical protein Vc1321 vc1321 SWALL:Q9KSD7 (EMBL:AE004212) (1023 aa) fasta scores: E(): 5.9e-158, 44.92% id in 1004 aa; hypothetical protein complement(822429..825545) Burkholderia pseudomallei K96243 3093080 YP_107346.1 CDS BPSL0720 NC_006350.1 826042 827481 R Similar to Acetobacter polyoxogenes, and Acetobacter europaeus alcohol dehydrogenase cytochrome c subunit precursor adhB SWALL:CYCA_ACEPO (SWALL:Q03318) (468 aa) fasta scores: E(): 2.7e-55, 44.49% id in 418 aa, and to Pseudomonas aeruginosa probable cytochrome c precursor pa2266 SWALL:Q9I1K7 (EMBL:AE004652) (439 aa) fasta scores: E(): 9.6e-56, 45.51% id in 424 aa; alcohol dehydrogenase cytochrome c subunit complement(826042..827481) Burkholderia pseudomallei K96243 3094667 YP_107347.1 CDS BPSL0721 NC_006350.1 827463 828095 R hypothetical protein complement(827463..828095) Burkholderia pseudomallei K96243 3094668 YP_107348.1 CDS BPSL0722 NC_006350.1 828092 830917 R Similar to Rhizobium loti cytochrome c oxidase subunit I mll9630 SWALL:Q98P35 (EMBL:AP003017) (623 aa) fasta scores: E(): 4.7e-114, 49.91% id in 617 aa, and to Rhodobacter sphaeroides quinol oxidase subunit I QoxA SWALL:Q9Z605 (EMBL:AF111945) (825 aa) fasta scores: E(): 4.1e-101, 36.86% id in 898 aa, and to Rhizobium meliloti cytochrome c oxidase chain i protein rb0948 or smb21370 SWALL:Q92UY6 (EMBL:AL603645) (841 aa) fasta scores: E(): 4.3e-99, 36.39% id in 915 aa, and to Bacillus subtilis cytochrome c oxidase polypeptide I ctaD SWALL:COX1_BACSU (SWALL:P24010) (622 aa) fasta scores: E(): 5.4e-92, 42.45% id in 596 aa; possible pseudogene; cytochrome c oxidase subunit I complement(828092..830917) Burkholderia pseudomallei K96243 3092897 YP_107349.1 CDS BPSL0723 NC_006350.1 830934 832055 R Similar to Bacillus firmus cytochrome c oxidase polypeptide II precursor ctaC SWALL:COX2_BACFI (SWALL:Q04441) (342 aa) fasta scores: E(): 3e-28, 34.07% id in 314 aa, and to Rhizobium loti cytochrome oxidase subunit II mll9631 SWALL:Q98P34 (EMBL:AP003017) (330 aa) fasta scores: E(): 1.6e-39, 43.77% id in 297 aa, and to Rhizobium meliloti cytochrome c oxidase chain II protein rb0946 or smb21368 SWALL:Q92UY8 (EMBL:AL603645) (327 aa) fasta scores: E(): 2e-35, 40.36% id in 327 aa; Possible alternative start at codon 70; cytochrome c oxidase polypeptide II complement(830934..832055) Burkholderia pseudomallei K96243 3092898 YP_107350.1 CDS BPSL0724 NC_006350.1 832108 833934 R catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein complement(832108..833934) Burkholderia pseudomallei K96243 3092843 YP_107351.1 CDS BPSL0725 NC_006350.1 834328 835428 D Similar to Pseudomonas putida mandelate racemase mdlA SWALL:MANR_PSEPU (SWALL:P11444) (359 aa) fasta scores: E(): 4.1e-16, 28.42% id in 380 aa, and to Streptomyces coelicolor racemase sco7415 or sc6d11.11 SWALL:Q9L144 (EMBL:AL158061) (385 aa) fasta scores: E(): 1.4e-64, 49.04% id in 367 aa, and to Brucella melitensis mandelate racemase bmei1712 SWALL:Q8YF15 (EMBL:AE009605) (372 aa) fasta scores: E(): 2.4e-30, 36% id in 350 aa; mandelate racemase 834328..835428 Burkholderia pseudomallei K96243 3092844 YP_107352.1 CDS BPSL0726 NC_006350.1 835438 836409 D hypothetical protein 835438..836409 Burkholderia pseudomallei K96243 3092404 YP_107353.1 CDS BPSL0727 NC_006350.1 836406 837242 D hypothetical protein 836406..837242 Burkholderia pseudomallei K96243 3092405 YP_107354.1 CDS BPSL0728 NC_006350.1 837325 838923 D Similar to Burkholderia cepacia glucose dehydrogenase gdhalphA SWALL:AAN39686 (EMBL:AF430844) (539 aa) fasta scores: E(): 5.8e-30, 29.76% id in 541 aa, and to Xanthomonas axonopodis 2-keto-gluconate dehydrogenase xac2128 SWALL:Q8PKP1 (EMBL:AE011848) (508 aa) fasta scores: E(): 5.4e-62, 41.53% id in 520 aa, and to Halobacterium sp. Vng1035C vng1035C SWALL:Q9HQR8 (EMBL:AE005037) (529 aa) fasta scores: E(): 2.8e-44, 35.97% id in 531 aa; glucose dehydrogenase 837325..838923 Burkholderia pseudomallei K96243 3094384 YP_107355.1 CDS BPSL0729 NC_006350.1 838970 840907 R Similar to Ralstonia solanacearum hypothetical protein rsp0747 or rs01961 SWALL:Q8XRT4 (EMBL:AL646080) (616 aa) fasta scores: E(): 1.6e-58, 45.23% id in 619 aa, and to Rhizobium leguminosarum ImpG SWALL:Q93EC7 (EMBL:AF361470) (593 aa) fasta scores: E(): 1.2e-25, 31.75% id in 611 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0088 SWALL:Q9I744 (EMBL:AE004447) (619 aa) fasta scores: E(): 1.7e-25, 30.9% id in 631 aa; hypothetical protein complement(838970..840907) Burkholderia pseudomallei K96243 3094385 YP_107356.1 CDS BPSL0730 NC_006350.1 841615 844116 D Similar to Pseudomonas sp. penicillin acylase II precursor AcyII SWALL:PAC2_PSES3 (SWALL:P15558) (773 aa) fasta scores: E(): 4.1e-30, 29.28% id in 782 aa, and to Xanthomonas campestris penicillin acylase II AcyII or xcc1392 SWALL:AAM40690 (EMBL:AE012238) (828 aa) fasta scores: E(): 5.1e-43, 40.81% id in 838 aa, and to Xanthomonas axonopodis penicillin acylase II acyII or xac1437 SWALL:AAM36308 (EMBL:AE011775) (569 aa) fasta scores: E(): 1e-41, 41.78% id in 572 aa; possible alternative start site at codon 71; peptidase 841615..844116 Burkholderia pseudomallei K96243 3092649 YP_107357.1 CDS BPSL0731 NC_006350.1 844113 845339 D Similar to previously sequenced Burkholderia cepacia transcriptional regulator CeoR ceoR SWALL:Q8VL17 (EMBL:AY008288) (334 aa) fasta scores: E(): 1.1e-81, 64.39% id in 323 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1110 or rs02618 SWALL:Q8XQV8 (EMBL:AL646082) (315 aa) fasta scores: E(): 1.8e-59, 49.33% id in 300 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2877 SWALL:Q9HZX0 (EMBL:AE004714) (297 aa) fasta scores: E(): 2.1e-49, 45.57% id in 294 aa; LysR family transcriptional regulator 844113..845339 Burkholderia pseudomallei K96243 3092650 YP_107358.1 CDS BPSL0732 NC_006350.1 845513 847321 R Similar to Rhodobacter sphaeroides DMSO/TMAO-sensor kinase dorS SWALL:O30740 (EMBL:AF016236) (815 aa) fasta scores: E(): 4.6e-25, 33.24% id in 385 aa, and to Caulobacter crescentus sensor histidine kinase / response regulator cc0723 SWALL:Q9AA83 (EMBL:AE005747) (591 aa) fasta scores: E(): 1.6e-27, 30.34% id in 412 aa, and to Xanthomonas campestris two-component system sensor protein xcc2360 SWALL:AAM41638 (EMBL:AE012344) (1364 aa) fasta scores: E(): 3.7e-26, 29.7% id in 404 aa; two-component regulator histidine sensor kinase complement(845513..847321) Burkholderia pseudomallei K96243 3094651 YP_107359.1 CDS BPSL0733 NC_006350.1 847318 847833 R C-terminus is similar to the C-terminal region of Agrobacterium tumefaciens hypothetical protein atu3496 or agr_l_2662 SWALL:Q8UA78 (EMBL:AE009279) (168 aa) fasta scores: E(): 4.3e-11, 34.78% id in 138 aa. Weakly similar to to Pseudomonas aeruginosa hypothetical protein pa2869 SWALL:Q9HZX7 (EMBL:AE004713) (162 aa) fasta scores: E(): 2.8e-07, 28.48% id in 158 aa, and to Vibrio cholerae hypothetical protein vc1933 SWALL:Q9KQR5 (EMBL:AE004269) (156 aa) fasta scores: E(): 7e-06, 27.04% id in 159 aa, and to Vibrio cholerae hypothetical protein Vca0075 vca0075 SWALL:Q9KN90 (EMBL:AE004350) (155 aa) fasta scores: E(): 9.5e-06, 28.85% id in 149 aa; hypothetical protein complement(847318..847833) Burkholderia pseudomallei K96243 3094652 YP_107360.1 CDS BPSL0734 NC_006350.1 847843 848805 R From codon 189-321 similar to Xanthomonas axonopodis two-component system regulatory protein colR or xac1221 SWALL:AAM36093 (EMBL:AE011752) (238 aa) fasta scores: E(): 0.0042, 24.21% id in 128 aa, and to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 0.0087, 30.46% id in 128 aa; two-component transcriptional response regulator complement(847843..848805) Burkholderia pseudomallei K96243 3094440 YP_107361.1 CDS BPSL0735 NC_006350.1 849102 849665 D Doubtful CDS. No significant database matches; hypothetical protein 849102..849665 Burkholderia pseudomallei K96243 3094441 YP_107362.1 CDS BPSL0736 NC_006350.1 851785 852705 R No significant hits in the databases; hypothetical protein complement(851785..852705) Burkholderia pseudomallei K96243 3092562 YP_107363.1 CDS BPSL0737 NC_006350.1 852864 853181 D Doubtful CDS. No significant hits in the databases; hypothetical protein 852864..853181 Burkholderia pseudomallei K96243 3092563 YP_107364.1 CDS BPSL0738 NC_006350.1 853178 854035 D Weakly similar to Agrobacterium tumefaciens hypothetical protein atu5018 or agr_pat_24 SWALL:Q8UKT1 (EMBL:AE008927) (288 aa) fasta scores: E(): 0.00011, 27.24% id in 290 aa; hypothetical protein 853178..854035 Burkholderia pseudomallei K96243 3092126 YP_107365.1 CDS BPSL0739 NC_006350.1 854145 854459 R Doubtful CDS. No significant database matches; hypothetical protein complement(854145..854459) Burkholderia pseudomallei K96243 3092127 YP_107366.1 CDS BPSL0740 NC_006350.1 854492 854656 R Doubtful CDS. No significant database matches; hypothetical protein complement(854492..854656) Burkholderia pseudomallei K96243 3092841 YP_107367.1 CDS BPSL0741 NC_006350.1 855094 855651 R Similar to Ralstonia solanacearum hypothetical protein rsc2611 or rs00860 SWALL:Q8XW64 (EMBL:AL646071) (187 aa) fasta scores: E(): 5.2e-12, 33.33% id in 183 aa, and to Anabaena sp. hypothetical protein all2200 SWALL:Q8YUY1 (EMBL:AP003588) (186 aa) fasta scores: E(): 8.2e-12, 32.54% id in 169 aa; hypothetical protein complement(855094..855651) Burkholderia pseudomallei K96243 3092842 YP_107368.1 CDS BPSL0742 NC_006350.1 855653 856495 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2612 or rs00912 SWALL:Q8XW63 (EMBL:AL646071) (282 aa) fasta scores: E(): 7e-12, 26.29% id in 270 aa, and to Streptomyces coelicolor regulatory protein sco3291 or sce15.08 SWALL:Q9X883 (EMBL:AL049707) (477 aa) fasta scores: E(): 2.3e-07, 26.53% id in 196 aa; hypothetical protein complement(855653..856495) Burkholderia pseudomallei K96243 3091534 YP_107369.1 CDS BPSL0743 NC_006350.1 856592 857440 R Similar to Vibrio cholerae hypothetical protein vca0396 SWALL:Q9KMG2 (EMBL:AE004375) (276 aa) fasta scores: E(): 1.4e-43, 44.2% id in 276 aa; hypothetical protein complement(856592..857440) Burkholderia pseudomallei K96243 3091535 YP_107370.1 CDS BPSL0744 NC_006350.1 857474 858832 R Similar to Xanthomonas axonopodis integrase xac3298 SWALL:AAM38142 (EMBL:AE011975) (505 aa) fasta scores: E(): 9.7e-19, 28.48% id in 488 aa, and to Xanthomonas axonopodis phage-related integrase int or xac1510 SWALL:AAM36380 (EMBL:AE011783) (510 aa) fasta scores: E(): 3.2e-13, 28.09% id in 363 aa, and to Escherichia coli O157:H7 integrase z5878 or ecs5242 SWALL:Q8XC99 (EMBL:AE005658) (649 aa) fasta scores: E(): 6.8e-13, 27.9% id in 319 aa; phage-related integrase complement(857474..858832) Burkholderia pseudomallei K96243 3092573 YP_107371.1 CDS BPSL0745 NC_006350.1 859567 860280 D hypothetical protein 859567..860280 Burkholderia pseudomallei K96243 3092574 YP_107372.1 CDS BPSL0746 NC_006350.1 860669 861031 D hypothetical protein 860669..861031 Burkholderia pseudomallei K96243 3091667 YP_107373.1 CDS BPSL0747 NC_006350.1 861100 862581 D hypothetical protein 861100..862581 Burkholderia pseudomallei K96243 3091668 YP_107374.1 CDS BPSL0747a NC_006350.1 862583 862909 D hypothetical protein 862583..862909 Burkholderia pseudomallei K96243 3091998 YP_107375.1 CDS BPSL0748 NC_006350.1 863547 864605 D No significant database matches to the full length CDS. N-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0325 or ecs0290 SWALL:Q8X7K6 (EMBL:AE005203) (138 aa) fasta scores: E(): 7.4e-11, 37.98% id in 129 aa, and the C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0326 or ecs0291 SWALL:Q8X7K5 (EMBL:AE005203) (205 aa) fasta scores: E(): 7e-12, 31.25% id in 192 aa. CDS is a possible fusion protein; hypothetical protein 863547..864605 Burkholderia pseudomallei K96243 3091999 YP_107376.1 CDS BPSL0749 NC_006350.1 864580 865065 D Similar to Escherichia coli O157:H7 hypothetical protein z0327 or ecs0292 SWALL:Q8X7K4 (EMBL:AE005203) (152 aa) fasta scores: E(): 6.8e-05, 22.44% id in 147 aa; hypothetical protein 864580..865065 Burkholderia pseudomallei K96243 3091450 YP_107377.1 CDS BPSL0750 NC_006350.1 865065 866873 D C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa; hypothetical protein 865065..866873 Burkholderia pseudomallei K96243 3091451 YP_107378.1 CDS BPSL0751 NC_006350.1 867220 868476 D hypothetical protein 867220..868476 Burkholderia pseudomallei K96243 3091615 YP_107379.1 CDS BPSL0752 NC_006350.1 868473 869510 D hypothetical protein 868473..869510 Burkholderia pseudomallei K96243 3091616 YP_107380.1 CDS BPSL0753 NC_006350.1 869736 870419 D hypothetical protein 869736..870419 Burkholderia pseudomallei K96243 3091852 YP_107381.1 CDS BPSL0756 NC_006350.1 873400 873708 R Similar to Salmonella enterica, and Salmonella paratyphi-A regulatory protein SbaIC SWALL:Q9EZ27 (EMBL:AF508974) (78 aa) fasta scores: E(): 1.8e-08, 49.33% id in 75 aa, and to Proteus vulgaris transcriptional activator for bicistronic pvuIICR operon PvuIIC SWALL:Q52622 (EMBL:AF305615) (84 aa) fasta scores: E(): 6e-06, 41.25% id in 80 aa, and to Escherichia coli O157:H7 z5888 protein z5888 or ecs5252 SWALL:Q8XC87 (EMBL:AE005659) (154 aa) fasta scores: E(): 6.4e-06, 40.26% id in 77 aa; DNA-binding protein complement(873400..873708) Burkholderia pseudomallei K96243 3093245 YP_107382.1 CDS BPSL0757 NC_006350.1 874119 874562 D hypothetical protein 874119..874562 Burkholderia pseudomallei K96243 3093246 YP_107383.1 CDS BPSL0758 NC_006350.1 874574 875362 D Similar to Pseudomonas aeruginosa hypothetical protein pa0544 SWALL:Q9I5Z2 (EMBL:AE004490) (247 aa) fasta scores: E(): 4e-32, 40% id in 255 aa, and to Microscilla sp. PRE1 ms153 SWALL:Q93P78 (EMBL:AF339846) (253 aa) fasta scores: E(): 1.5e-10, 28.62% id in 248 aa, and to Microscilla sp. PRE1 ms158, hypothetical protein SWALL:Q93P73 (EMBL:AF339846) (252 aa) fasta scores: E(): 5.7e-09, 27.12% id in 247 aa; phosphoesterase 874574..875362 Burkholderia pseudomallei K96243 3091927 YP_107384.1 CDS BPSL0759 NC_006350.1 875636 876130 D No significant database matches. Similar to BPSL0551, 75.904% identity (76.829% ungapped) in 166 aa overlap; hypothetical protein 875636..876130 Burkholderia pseudomallei K96243 3091928 YP_107385.1 CDS BPSL0760 NC_006350.1 876189 876446 D hypothetical protein 876189..876446 Burkholderia pseudomallei K96243 3091782 YP_107386.1 CDS BPSL0761 NC_006350.1 876443 877015 D hypothetical protein 876443..877015 Burkholderia pseudomallei K96243 3091783 YP_107387.1 CDS BPSL0762 NC_006350.1 877250 877804 D Similar to Escherichia coli RNA 2'-phosphotransferase KptA or b4331 SWALL:KPTA_ECOLI (SWALL:P39380) (184 aa) fasta scores: E(): 7.1e-26, 45.93% id in 172 aa, and to Streptomyces coelicolor probable RNA 2'-phosphotransferase sco3953 or scd78.20C SWALL:KPTA_STRCO (SWALL:Q9ZBX9) (182 aa) fasta scores: E(): 5.9e-37, 56.89% id in 174 aa; RNA 2'-phosphotransferase 877250..877804 Burkholderia pseudomallei K96243 3091957 YP_107388.1 CDS BPSL0763 NC_006350.1 878619 881801 D Similar to Bacteroides nodosus DEAH ATP-dependent helicase SWALL:O32494 (EMBL:U20246) (965 aa) fasta scores: E(): 2.4e-28, 28.84% id in 780 aa, and to Xanthomonas campestris helicase xcc0524 SWALL:AAM39840 (EMBL:AE012150) (967 aa) fasta scores: E(): 1.8e-11, 25.36% id in 962 aa, and to Halobacterium sp. similar to Escherichia coli vng5141g or vng6139G SWALL:O52003 (EMBL:AF016485) (979 aa) fasta scores: E(): 1.9e-10, 27.33% id in 995 aa. Possible alternative translational start site; helicase SNF2 family protein 878619..881801 Burkholderia pseudomallei K96243 3091958 YP_107389.1 CDS BPSL0764 NC_006350.1 881805 886049 D Weakly similar to Borrelia burgdorferi hypothetical protein bbh09 SWALL:O50667 (EMBL:AE000784) (1278 aa) fasta scores: E(): 5.5e-09, 23.87% id in 490 aa, and Borrelia burgdorferi hypothetical protein bbe02 SWALL:O50698 (EMBL:AE000785) (1277 aa) fasta scores: E(): 1.1e-08, 23.82% id in 491 aa; hypothetical protein 881805..886049 Burkholderia pseudomallei K96243 3094852 YP_107390.1 CDS BPSL0765 NC_006350.1 886079 889639 D Similar to Methanosarcina mazei superfamily II DNA and RNA helicase mm0276 SWALL:AAM29972 (EMBL:AE013252) (1275 aa) fasta scores: E(): 2.2e-29, 29.29% id in 1205 aa, and to Methanobacterium thermoautotrophicum hypothetical protein MTH497 SWALL:O26597 (EMBL:AE000833) (1235 aa) fasta scores: E(): 4.5e-15, 29.16% id in 1310 aa; helicase 886079..889639 Burkholderia pseudomallei K96243 3094853 YP_107391.1 CDS BPSL0766 NC_006350.1 889636 891471 D Weakly similar to Methanobacterium thermoautotrophicum hypothetical protein mth498 SWALL:O26598 (EMBL:AE000833) (578 aa) fasta scores: E(): 9e-26, 26.06% id in 637 aa, and Methanosarcina mazei hypothetical protein mm0275 SWALL:AAM29971 (EMBL:AE013252) (600 aa) fasta scores: E(): 8e-07, 25.03% id in 643 aa; hypothetical protein 889636..891471 Burkholderia pseudomallei K96243 3093688 YP_107392.1 CDS BPSL0767 NC_006350.1 891474 892274 D No significant database matches to the full length CDS. C-terminal region is weakly similar to internal region of Xanthomonas campestris cardiolipin synthase xcc2706 SWALL:Q8P7A5 (EMBL:AE012383) (520 aa) fasta scores: E(): 0.048, 31.94% id in 144 aa, and to Yersinia enterocolitica endonuclease Nuc SWALL:Q9ZA69 (EMBL:AF102990) (180 aa) fasta scores: E(): 0.79, 28.99% id in 169 aa; phospholipase 891474..892274 Burkholderia pseudomallei K96243 3093689 YP_107393.1 CDS BPSL0768 NC_006350.1 892358 893590 D Similar to Xanthomonas campestris hypothetical protein xcc1600 SWALL:AAM40894 (EMBL:AE012261) (404 aa) fasta scores: E(): 3.9e-52, 37.92% id in 385 aa, and to Agrobacterium tumefaciens Ti plasmid hypothetical protein Ymg SWALL:O52296 (EMBL:AF242881) (388 aa) fasta scores: E(): 3.6e-09, 27.12% id in 424 aa, and to Vibrio cholerae hypothetical protein vc0492 SWALL:Q9KUM3 (EMBL:AE004135) (388 aa) fasta scores: E(): 5.3e-07, 20.9% id in 397 aa; hypothetical protein 892358..893590 Burkholderia pseudomallei K96243 3093433 YP_107394.1 CDS BPSL0769 NC_006350.1 893583 894086 D Weakly similar to Agrobacterium tumefaciens Ti plasmid hypothetical protein Ymf SWALL:O52295 (EMBL:AF242881) (168 aa) fasta scores: E(): 0.43, 28.14% id in 167 aa; No significant database matches; hypothetical protein 893583..894086 Burkholderia pseudomallei K96243 3093434 YP_107395.1 CDS BPSL0770 NC_006350.1 894083 896029 D Similar to Xanthomonas campestris plasmid-related protein xcc1599 SWALL:AAM40893 (EMBL:AE012261) (659 aa) fasta scores: E(): 9.2e-77, 36.67% id in 649 aa, and to Agrobacterium tumefaciens Ti plasmid hypothetical protein Yme SWALL:O52294 (EMBL:AF242881) (660 aa) fasta scores: E(): 2.1e-40, 28.83% id in 652 aa, and to Vibrio cholerae hypothetical protein vc0490 SWALL:Q9KUM5 (EMBL:AE004135) (653 aa) fasta scores: E(): 1.8e-29, 26.52% id in 671 aa; hypothetical protein 894083..896029 Burkholderia pseudomallei K96243 3092951 YP_107396.1 CDS BPSL0771 NC_006350.1 896323 896559 R No significant hits in the databases. Possible alternative start at codon 10; hypothetical protein complement(896323..896559) Burkholderia pseudomallei K96243 3092952 YP_107397.1 CDS BPSL0772 NC_006350.1 896537 898423 R Possible gene remnant. From codon 361 similar to Xanthomonas campestris phage-related integrase Int or xcc1642 SWALL:Q8PA51 (EMBL:AE012265) (182 aa) fasta scores: E(): 0.029, 32.39% id in 142 aa, and to Xanthomonas axonopodis integrase xac1107 SWALL:Q8PNG3 (EMBL:AE011739) (485 aa) fasta scores: E(): 0.088, 27.41% id in 383 aa; phage integrase complement(896537..898423) Burkholderia pseudomallei K96243 3094587 YP_107398.1 CDS BPSL0773 NC_006350.1 898930 900600 R Similar to Caulobacter crescentus major facilitator family transporter cc0980 SWALL:Q9A9K0 (EMBL:AE005775) (567 aa) fasta scores: E(): 1.3e-141, 66.97% id in 548 aa, and to Bradyrhizobium japonicum integral inner membrane metabolite transport protein MtbA SWALL:Q9JMW8 (EMBL:U33883) (555 aa) fasta scores: E(): 3.5e-115, 58.71% id in 562 aa, and to Ralstonia solanacearum sugar transporter transmembrane protein rsc0547 or rs04914 SWALL:Q8Y1Z0 (EMBL:AL646059) (567 aa) fasta scores: E(): 1.3e-113, 71.4% id in 556 aa; transmembrane transport protein complement(898930..900600) Burkholderia pseudomallei K96243 3094588 YP_107399.1 CDS BPSL0774 NC_006350.1 900811 902367 R Similar to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc0549 or rs04917 SWALL:Q8Y1Y8 (EMBL:AL646059) (513 aa) fasta scores: E(): 3.9e-104, 58.77% id in 507 aa, and to Ralstonia solanacearum probable two-component transmembrane sensor kinase transcription regulator protein rsc1735 or rs02923 SWALL:Q8XYM3 (EMBL:AL646066) (471 aa) fasta scores: E(): 2e-49, 37.69% id in 451 aa, and to Rhizobium loti two-component system, sensor protein mll7952 SWALL:Q984L4 (EMBL:AP003013) (452 aa) fasta scores: E(): 9.4e-48, 38.28% id in 444 aa; two-component sensor kinase transcriptional regulatory protein complement(900811..902367) Burkholderia pseudomallei K96243 3093153 YP_107400.1 CDS BPSL0775 NC_006350.1 902391 903134 R Similar to Bordetella pertussis transcriptional regulatory protein, BasR SWALL:Q9S3M3 (EMBL:AJ132741) (223 aa) fasta scores: E(): 3.2e-37, 53.6% id in 222 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc0550 or rs04916 SWALL:Q8Y1Y7 (EMBL:AL646059) (232 aa) fasta scores: E(): 2.1e-63, 78.94% id in 228 aa, and to Agrobacterium tumefaciens two component response regulator TctD SWALL:Q8UCL7 (EMBL:AE009193) (245 aa) fasta scores: E(): 1.7e-37, 51.81% id in 220 aa; response regulator transcription regulatory protein complement(902391..903134) Burkholderia pseudomallei K96243 3093154 YP_107401.1 CDS recA NC_006350.1 903338 904408 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 903338..904408 Burkholderia pseudomallei K96243 3094325 YP_107402.1 CDS recX NC_006350.1 904774 905391 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 904774..905391 Burkholderia pseudomallei K96243 3094326 YP_107403.1 CDS BPSL0778 NC_006350.1 905683 906294 D Similar to Ralstonia solanacearum hypothetical protein rsc0553 or rs04912 SWALL:Q8Y1Y4 (EMBL:AL646059) (208 aa) fasta scores: E(): 4.5e-48, 60.51% id in 195 aa; alternative start site at codon 11; hypothetical protein 905683..906294 Burkholderia pseudomallei K96243 3093914 YP_107404.1 CDS sucC NC_006350.1 906374 907540 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 906374..907540 Burkholderia pseudomallei K96243 3093010 YP_107405.1 CDS sucD NC_006350.1 907685 908566 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 907685..908566 Burkholderia pseudomallei K96243 3092908 YP_107406.1 CDS BPSL0781 NC_006350.1 908618 909430 D Similar to Pseudomonas aeruginosa hypothetical protein Pa1170 pa1170 SWALL:Q9I4G7 (EMBL:AE004547) (244 aa) fasta scores: E(): 3.1e-40, 54.05% id in 222 aa, and to Ralstonia solanacearum hypothetical transmembrane protein Rsc0556 rsc0556 or rs04909 SWALL:Q8Y1Y1 (EMBL:AL646060) (232 aa) fasta scores: E(): 1e-36, 48.66% id in 224 aa, and to Ralstonia solanacearum probable transmembrane protein rsc0949 or rs04438 SWALL:Q8Y0U4 (EMBL:AL646061) (230 aa) fasta scores: E(): 3.2e-28, 42.24% id in 232 aa; hypothetical protein 908618..909430 Burkholderia pseudomallei K96243 3093915 YP_107407.1 CDS BPSL0782 NC_006350.1 909649 910167 D Similar to Ralstonia solanacearum type 4 fimbrial pilin signal peptide protein pilA or rsc0558 or rs04907 SWALL:Q8Y1X9 (EMBL:AL646060) (168 aa) fasta scores: E(): 8.6e-15, 45.9% id in 183 aa, and to Ralstonia solanacearum probable type 4 fimbrial pilin signal peptide protein pilA1 or rsc0557 or rs04908 SWALL:Q8Y1Y0 (EMBL:AL646060) (173 aa) fasta scores: E(): 1.2e-19, 46.89% id in 177 aa, and to Xanthomonas campestris pilin xcc3098 SWALL:AAM42369 (EMBL:AE012425) (144 aa) fasta scores: E(): 3.8e-10, 40% id in 145 aa; type 4 fimbrial pilin protein 909649..910167 Burkholderia pseudomallei K96243 3092148 YP_107408.1 CDS BPSL0783 NC_006350.1 910375 912192 D Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc0559 rsc0559 or rs04906 SWALL:Q8Y1X8 (EMBL:AL646060) (569 aa) fasta scores: E(): 3.4e-42, 33.27% id in 526 aa, and to Neisseria meningitidis possible integral membrane protein nma0800 SWALL:Q9JVK5 (EMBL:AL162754) (604 aa) fasta scores: E(): 1.1e-14, 23.06% id in 594 aa, and to Neisseria meningitidis hypothetical protein Nmb0596 nmb0596 SWALL:Q9K0K0 (EMBL:AE002415) (604 aa) fasta scores: E(): 1.4e-14, 23.07% id in 598 aa; hypothetical protein 910375..912192 Burkholderia pseudomallei K96243 3092149 YP_107409.1 CDS BPSL0784 NC_006350.1 912788 913261 D Similar to Yersinia pestis exported protein ypo0406 SWALL:Q8ZIT2 (EMBL:AJ414142) (163 aa) fasta scores: E(): 4e-07, 35.15% id in 165 aa; Hits of low significance in the database; upstream repeat region (cggacaccggacac)3 and (catcgga)3; hypothetical protein 912788..913261 Burkholderia pseudomallei K96243 3094398 YP_107410.1 CDS BPSL0785 NC_006350.1 913498 913863 D Weakly similar to the C-terminal region of Ralstonia solanacearum probable TonB transmembrane protein rsc1963 or rs03537 SWALL:Q8XY00 (EMBL:AL646067) (221 aa) fasta scores: E(): 0.0082, 26.92% id in 104 aa; Hits of low significance in the databases; lipoprotein 913498..913863 Burkholderia pseudomallei K96243 3094399 YP_107411.1 CDS moaC NC_006350.1 914057 914551 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(914057..914551) Burkholderia pseudomallei K96243 3093064 YP_107412.1 CDS BPSL0787 NC_006350.1 914698 916422 D Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc0561 or rs04904 SWALL:Q8Y1X6 (EMBL:AL646060) (561 aa) fasta scores: E(): 1.5e-79, 49.27% id in 550 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa1005 SWALL:Q9I4W8 (EMBL:AE004533) (477 aa) fasta scores: E(): 9.1e-33, 34.7% id in 487 aa. Possible alternative translational start site; hypothetical protein 914698..916422 Burkholderia pseudomallei K96243 3093163 YP_107413.1 CDS BPSL0788 NC_006350.1 916748 917371 R Similar to Ralstonia solanacearum hypothetical protein rsc0562 or rs04903 SWALL:Q8Y1X5 (EMBL:AL646060) (195 aa) fasta scores: E(): 1.8e-34, 50.99% id in 202 aa; downstream repeat region(acagcacaa)3; hypothetical protein complement(916748..917371) Burkholderia pseudomallei K96243 3093164 YP_107414.1 CDS BPSL0789 NC_006350.1 917364 918398 R Similar to Ralstonia solanacearum hypothetical protein rsc0563 or rs04902 SWALL:Q8Y1X4 (EMBL:AL646060) (371 aa) fasta scores: E(): 1.5e-76, 58.43% id in 332 aa, and to Neisseria meningitidis hypothetical protein nmb0276 SWALL:Q9K191 (EMBL:AE002384) (318 aa) fasta scores: E(): 3.2e-44, 47.66% id in 321 aa, and to Neisseria meningitidis hypothetical protein nma2211 SWALL:Q9JSN5 (EMBL:AL162758) (318 aa) fasta scores: E(): 3.7e-44, 47.17% id in 318 aa; hydrolase complement(917364..918398) Burkholderia pseudomallei K96243 3092709 YP_107415.1 CDS BPSL0790 NC_006350.1 918418 918864 R Similar to Ralstonia solanacearum hypothetical protein rsc0564 or rs04901 SWALL:Q8Y1X3 (EMBL:AL646060) (146 aa) fasta scores: E(): 2.4e-19, 43.75% id in 144 aa; hypothetical protein complement(918418..918864) Burkholderia pseudomallei K96243 3092710 YP_107416.1 CDS waaF NC_006350.1 918996 920036 R Previously sequenced as Burkholderia pseudomallei heptosyl transferase WaaF SWALL:Q9ZFN3 (EMBL:AF097748) (346 aa) fasta scores: E(): 6.5e-139, 99.42% id in 346 aa. Similar to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF or Waaf SWALL:RFAF_ECOLI (SWALL:P37692) (348 aa) fasta scores: E(): 1.8e-49, 44.03% id in 352 aa; ADP-heptose--LPS heptosyltransferase II complement(918996..920036) Burkholderia pseudomallei K96243 3093887 YP_107417.1 CDS BPSL0792 NC_006350.1 920164 920361 R Similar to Ralstonia solanacearum hypothetical protein rsc0566 or rs04899 SWALL:Q8Y1X1 (EMBL:AL646060) (65 aa) fasta scores: E(): 6.7e-12, 57.62% id in 59 aa, and to Neisseria meningitidis hypothetical protein nmb0542 SWALL:Q9K0P3 (EMBL:AE002410) (67 aa) fasta scores: E(): 4.1e-07, 44.06% id in 59 aa; hypothetical protein complement(920164..920361) Burkholderia pseudomallei K96243 3092094 YP_107418.1 CDS ilvE NC_006350.1 920427 921350 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(920427..921350) Burkholderia pseudomallei K96243 3093889 YP_107419.1 CDS BPSL0794 NC_006350.1 921572 922321 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0568 or rs04897 SWALL:Q8Y1W9 (EMBL:AL646060) (265 aa) fasta scores: E(): 2.7e-49, 59.18% id in 245 aa. Weakly similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0513 or rs04992 SWALL:Q8Y223 (EMBL:AL646059) (242 aa) fasta scores: E(): 3.5e-15, 28.2% id in 234 aa; AzlC family protein 921572..922321 Burkholderia pseudomallei K96243 3092095 YP_107420.1 CDS BPSL0795 NC_006350.1 922318 922641 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0569 or rs04896 SWALL:Q8Y1W8 (EMBL:AL646060) (107 aa) fasta scores: E(): 8.6e-16, 50.47% id in 105 aa; hypothetical protein 922318..922641 Burkholderia pseudomallei K96243 3091983 YP_107421.1 CDS pgk NC_006350.1 922908 924101 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 922908..924101 Burkholderia pseudomallei K96243 3092746 YP_107422.1 CDS pykA NC_006350.1 924436 925872 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 924436..925872 Burkholderia pseudomallei K96243 3093639 YP_107423.1 CDS cbbA NC_006350.1 926153 927217 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 926153..927217 Burkholderia pseudomallei K96243 3092411 YP_107424.1 CDS hemH NC_006350.1 927407 928297 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 927407..928297 Burkholderia pseudomallei K96243 3094817 YP_107425.1 CDS purE NC_006350.1 928333 928851 D Similar to Bacillus subtilis phosphoribosylaminoimidazole carboxylase catalytic subunit PurE SWALL:PUR6_BACSU (SWALL:P12044) (162 aa) fasta scores: E(): 1.2e-32, 67.58% id in 145 aa, and to Ralstonia solanacearum probable phosphoribosylaminoimidazole carboxylase catalytic subunit protein rsc0575 or rs04890 SWALL:Q8Y1W2 (EMBL:AL646060) (169 aa) fasta scores: E(): 6.3e-42, 74.07% id in 162 aa; phosphoribosylaminoimidazole carboxylase catalytic subunit 928333..928851 Burkholderia pseudomallei K96243 3092356 YP_107426.1 CDS purK NC_006350.1 928931 930127 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 928931..930127 Burkholderia pseudomallei K96243 3091911 YP_107427.1 CDS BPSL0802 NC_006350.1 930139 931164 D Similar to Ralstonia solanacearum hypothetical protein rsc0577 or rs04888 SWALL:Q8Y1W0 (EMBL:AL646060) (336 aa) fasta scores: E(): 3e-68, 64.16% id in 346 aa, and to Thermomonospora fusca hypothetical protein SWALL:Q9XCD2 (EMBL:AF144563) (335 aa) fasta scores: E(): 4.4e-41, 49.24% id in 331 aa; hypothetical protein 930139..931164 Burkholderia pseudomallei K96243 3091984 YP_107428.1 CDS BPSL0803 NC_006350.1 931480 932619 R Similar to Ralstonia solanacearum lipase / esterase rsc0580 or rs04885 SWALL:Q8Y1V9 (EMBL:AL646060) (347 aa) fasta scores: E(): 0.00034, 44.07% id in 363 aa. C-terminal region is similar to the N-terminal region of Acidiphilium sp. AIU409 esterase estA SWALL:Q9WXJ8 (EMBL:AB026254) (627 aa) fasta scores: E(): 0.00055, 29.79% id in 339 aa; acylhydrolase complement(931480..932619) Burkholderia pseudomallei K96243 3094179 YP_107429.1 CDS BPSL0804 NC_006350.1 932724 933641 R Similar to Caulobacter crescentus hypothetical protein cc1444 SWALL:Q9A8B0 (EMBL:AE005819) (300 aa) fasta scores: E(): 6e-41, 40.79% id in 277 aa, and to Rhizobium loti hypothetical protein mll1065 SWALL:Q98LE0 (EMBL:AP002996) (317 aa) fasta scores: E(): 7.1e-40, 43.38% id in 272 aa; Upstream repeat region (cggcgagggaaacggcgagggaaacggcgagggaaa)3; hypothetical protein complement(932724..933641) Burkholderia pseudomallei K96243 3094180 YP_107430.1 CDS BPSL0805 NC_006350.1 934041 935492 R Weakly similar to Escherichia coli penicillin-binding protein 4 precursor DacB or b3182 SWALL:PBP4_ECOLI (SWALL:P24228) (477 aa) fasta scores: E(): 2.3e-23, 26.06% id in 422 aa. Similar to Ralstonia solanacearum probable D-alanyl-D-alanine carboxypeptidase signal peptide protein rsc0584 or rs04879 SWALL:Q8Y1V5 (EMBL:AL646060) (514 aa) fasta scores: E(): 1.3e-86, 54.25% id in 494 aa; Downstream repeat region (cggcgagggaaacggcgagggaaacggcgagggaaa)3; peptidase complement(934041..935492) Burkholderia pseudomallei K96243 3093045 YP_107431.1 CDS BPSL0806 NC_006350.1 935760 936422 D Two-component regulatory system family, response regulator protein. Similar to Escherichia coli transcriptional regulatory protein QseB SWALL:QSEB_ECOLI (SWALL:P52076) (219 aa) fasta scores: E(): 9.3e-39, 53.27% id in 214 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3404 or rs01713 SWALL:Q8XTZ1 (EMBL:AL646075) (221 aa) fasta scores: E(): 2.9e-46, 60.73% id in 219 aa; response regulator protein 935760..936422 Burkholderia pseudomallei K96243 3093046 YP_107432.1 CDS BPSL0807 NC_006350.1 936426 937742 D Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 4.1e-30, 31.04% id in 451 aa, and to Ralstonia solanacearum probable transmembrane two-component sensor kinase transcription regulator protein rsp1553 or rs02109 SWALL:Q8XPT4 (EMBL:AL646085) (438 aa) fasta scores: E(): 3e-69, 50.22% id in 438 aa; sensor kinase 936426..937742 Burkholderia pseudomallei K96243 3092687 YP_107433.1 CDS BPSL0808 NC_006350.1 938273 939691 D Similar to Pseudomonas aeruginosa serine protease MucD or pa0766 SWALL:Q57155 (EMBL:U49151) (474 aa) fasta scores: E(): 1.8e-70, 47.43% id in 468 aa, and to Ralstonia solanacearum probable protease signal peptide protein rsp1552 or rs02108 SWALL:Q8XPT5 (EMBL:AL646085) (490 aa) fasta scores: E(): 2.4e-89, 58.99% id in 478 aa; peptidase 938273..939691 Burkholderia pseudomallei K96243 3092688 YP_107434.1 CDS BPSL0809 NC_006350.1 939851 940273 D Similar to Ralstonia solanacearum signal peptide protein rsc1315 or rs02837 SWALL:Q8XZT0 (EMBL:AL646063) (141 aa) fasta scores: E(): 3.6e-06, 33.57% id in 137 aa; hypothetical protein 939851..940273 Burkholderia pseudomallei K96243 3093613 YP_107435.1 CDS BPSL0810 NC_006350.1 940401 940766 D Similar to Ralstonia solanacearum hypothetical protein rsc0235 or rs00667 SWALL:Q8Y2U7 (EMBL:AL646058) (118 aa) fasta scores: E(): 4.1e-11, 40.9% id in 110 aa, and to Rhizobium meliloti hypothetical protein rb0957 rb0957 or smb21379 SWALL:Q92UX8 (EMBL:AL603645) (124 aa) fasta scores: E(): 7.2e-10, 39.28% id in 112 aa; hypothetical protein 940401..940766 Burkholderia pseudomallei K96243 3093614 YP_107436.1 CDS BPSL0811 NC_006350.1 940794 941522 D Hits of low significance from the databases. Weakly similar to Ralstonia solanacearum probable transmembrane protein rsc1464 or rs03843 SWALL:Q8XZD7 (EMBL:AL646064) (213 aa) fasta scores: E(): 0.0012, 30.25% id in 238 aa; hypothetical protein 940794..941522 Burkholderia pseudomallei K96243 3093565 YP_107437.1 CDS bpeR NC_006350.1 941844 942479 R Similar to Escherichia coli potential acrAB operon repressor AcrR SWALL:ACRR_ECOLI (SWALL:P34000) (215 aa) fasta scores: E(): 1.2e-22, 38.75% id in 209 aa, and to Ralstonia solanacearum acrAB operon repressor transcription regulator protein rsc0012 or rs01834 SWALL:Q8Y3G8 (EMBL:AL646057) (219 aa) fasta scores: E(): 6e-34, 47.84% id in 209 aa; TetR family regulatory protein complement(941844..942479) Burkholderia pseudomallei K96243 3094029 YP_107438.1 CDS bpeA NC_006350.1 942889 944151 D Similar to Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor acrA or MtcA or Lir SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 5.5e-60, 53.76% id in 385 aa, and to Ralstonia solanacearum probable acriflavin resistance lipoprotein A precursor rsc0011 or rs01833 SWALL:Q8Y3G9 (EMBL:AL646057) (398 aa) fasta scores: E(): 6.6e-61, 55.22% id in 402 aa; RND family acriflavine resistance protein A 942889..944151 Burkholderia pseudomallei K96243 3094743 YP_107439.1 CDS bpeB NC_006350.1 944167 947367 D Similar to Escherichia coli acriflavine resistance protein B AcrB or AcrE or b0462 SWALL:ACRB_ECOLI (SWALL:P31224) (1049 aa) fasta scores: E(): 0, 66.63% id in 1049 aa, and to Klebsiella pneumoniae AcrB protein SWALL:Q93K40 (EMBL:AJ318073) (1048 aa) fasta scores: E(): 0, 66.79% id in 1048 aa; RND family acriflavine resistance protein 944167..947367 Burkholderia pseudomallei K96243 3094744 YP_107440.1 CDS oprB NC_006350.1 947371 948915 D Similar to Pseudomonas aeruginosa outer membrane protein OprM precursor pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 4.1e-85, 55.67% id in 476 aa, and to Xanthomonas axonopodis outer membrane protein xac2842 SWALL:AAM37687 (EMBL:AE011925) (503 aa) fasta scores: E(): 5.8e-84, 53.72% id in 497 aa; outer membrane efflux protein 947371..948915 Burkholderia pseudomallei K96243 3093418 YP_107441.1 CDS BPSL0817 NC_006350.1 949498 950943 R Similar to Bacillus subtilis xanthine permease PbuX SWALL:PBUX_BACSU (SWALL:P42086) (438 aa) fasta scores: E(): 3.3e-72, 48.67% id in 415 aa, and to Escherichia coli purine permease YgfU or b2888 SWALL:YGFU_ECOLI (SWALL:Q46821) (482 aa) fasta scores: E(): 9.1e-97, 59.03% id in 437 aa; permease complement(949498..950943) Burkholderia pseudomallei K96243 3093566 YP_107442.1 CDS BPSL0818 NC_006350.1 951272 952696 D Similar to Escherichia coli xylulose kinase XylB or b3564 SWALL:XYLB_ECOLI (SWALL:P09099) (484 aa) fasta scores: E(): 2.8e-24, 34.3% id in 481 aa, and to Rhizobium meliloti sugar kinase r02569 or smc02341 SWALL:Q92MP4 (EMBL:AL591791) (477 aa) fasta scores: E(): 2.7e-37, 41.5% id in 477 aa; sugar kinase 951272..952696 Burkholderia pseudomallei K96243 3094111 YP_107443.1 CDS BPSL0819 NC_006350.1 952965 953999 R Similar to Streptomyces griseus A-factor-responsive transcriptional activator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 2.1e-30, 36.33% id in 322 aa, and to Streptomyces coelicolor transcriptional regulator sco6746 or sc5f2a.29 SWALL:Q9X7Q2 (EMBL:AL049587) (325 aa) fasta scores: E(): 2.9e-43, 41.94% id in 329 aa; Alternative start site at codon 33; upstream repeat region (ggcgc)3; AraC family transcriptional regulator complement(952965..953999) Burkholderia pseudomallei K96243 3094112 YP_107444.1 CDS flhA NC_006350.1 954204 955310 D Similar to Paracoccus denitrificans glutathione-dependent formaldehyde dehydrogenase FlhA SWALL:FADH_PARDE (SWALL:P45382) (375 aa) fasta scores: E(): 1e-108, 75.2% id in 375 aa, and to Ralstonia solanacearum probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase AdhC1 or rsp0069 or rs02044 SWALL:Q8XTN7 (EMBL:AL646076) (368 aa) fasta scores: E(): 4e-128, 88.04% id in 368 aa; Upstream repeat region (ggcgc)3; glutathione-dependent formaldehyde dehydrogenase 954204..955310 Burkholderia pseudomallei K96243 3091474 YP_107445.1 CDS fghA NC_006350.1 955324 956184 D Similar to Paracoccus denitrificans S-formylglutathione hydrolase FghA SWALL:Q51671 (EMBL:U34346) (279 aa) fasta scores: E(): 5.9e-55, 52.29% id in 283 aa, and to Ralstonia solanacearum probable hydrolase oxidoreductase rsc0604 or rs04840 SWALL:Q8Y1T5 (EMBL:AL646060) (289 aa) fasta scores: E(): 2.9e-77, 69.03% id in 281 aa; S-formylglutathione hydrolase 955324..956184 Burkholderia pseudomallei K96243 3092671 YP_107446.1 CDS BPSL0822 NC_006350.1 956329 957120 R Similar to Mycobacterium leprae ABC-transporter transmembrane protein ml0335 SWALL:Q9CCW1 (EMBL:AL583918) (286 aa) fasta scores: E(): 6.6e-22, 35.63% id in 261 aa, and to Thermoanaerobacter tengcongensis ABC-type Mn2+/Zn2+ transport systems, permease components znuB or tte0361 SWALL:Q8RCQ5 (EMBL:AE013009) (263 aa) fasta scores: E(): 2.3e-20, 32.03% id in 256 aa; ABC transporter permease complement(956329..957120) Burkholderia pseudomallei K96243 3094191 YP_107447.1 CDS BPSL0823 NC_006350.1 957113 957985 R Similar to Mycobacterium leprae ABC-tranporter ATP-binding protein ml0336 SWALL:Q9CCW0 (EMBL:AL583918) (275 aa) fasta scores: E(): 4.4e-25, 43.6% id in 250 aa, and to Pyrococcus horikoshii hypothetical protein ph1653 SWALL:O59348 (EMBL:AP000006) (260 aa) fasta scores: E(): 1.1e-19, 33.2% id in 256 aa; ABC transporter ATP-binding protein complement(957113..957985) Burkholderia pseudomallei K96243 3094192 YP_107448.1 CDS BPSL0824 NC_006350.1 958008 958883 R Similar to Yersinia pestis periplasmic chelated iron-binding protein YfeA or ypo2439 or y1897 SWALL:YFEA_YERPE (SWALL:Q56952) (311 aa) fasta scores: E(): 3.9e-08, 31.05% id in 219 aa, and to Mycobacterium tuberculosis hypothetical protein rv2059 or mtcy63a.01c or mt2119 SWALL:O07257 (EMBL:Z97984) (511 aa) fasta scores: E(): 2.2e-19, 34.41% id in 247 aa; periplasmic solute-binding protein complement(958008..958883) Burkholderia pseudomallei K96243 3094299 YP_107449.1 CDS BPSL0825 NC_006350.1 959141 959605 R Similar to Escherichia coli zinc uptake regulation protein Zur or b4046 SWALL:ZUR_ECOLI (SWALL:P32692) (171 aa) fasta scores: E(): 2.7e-12, 33.57% id in 137 aa, and to Pseudomonas aeruginosa transcriptional regulator Np20 or pa5499 SWALL:Q9HT74 (EMBL:AE004962) (167 aa) fasta scores: E(): 6e-21, 42.17% id in 147 aa. Possible alternative translational start sites; FUR family transcriptional regulator complement(959141..959605) Burkholderia pseudomallei K96243 3094300 YP_107450.1 CDS BPSL0826 NC_006350.1 959899 960675 D Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 959899..960675 Burkholderia pseudomallei K96243 3093880 YP_107451.1 CDS scrK NC_006350.1 960680 961636 D Similar to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 9e-17, 33.91% id in 286 aa, and to Ralstonia solanacearum probable fructokinase CscK or rsc2146 or rs01457 SWALL:Q8XXG8 (EMBL:AL646068) (318 aa) fasta scores: E(): 3.1e-86, 74.52% id in 318 aa, and to Rhizobium loti fructokinase mll7216 SWALL:Q986T6 (EMBL:AP003011) (317 aa) fasta scores: E(): 1.6e-41, 42.81% id in 320 aa; fructokinase 960680..961636 Burkholderia pseudomallei K96243 3092279 YP_107452.1 CDS BPSL0828 NC_006350.1 961624 963120 D Similar to Escherichia coli tagatose 6-phosphate kinase agaZ or KbaZ or b3132 SWALL:AGAZ_ECOLI (SWALL:P42903) (426 aa) fasta scores: E(): 5.8e-30, 47.4% id in 481 aa, and to Ralstonia solanacearum tagatose 6-phosphate kinase rsc2145 or rs01458 SWALL:Q8XXG9 (EMBL:AL646068) (451 aa) fasta scores: E(): 1.7e-61, 65.85% id in 495 aa. Possible alternative translational start site; tagatose 6-phosphate kinase 961624..963120 Burkholderia pseudomallei K96243 3093881 YP_107453.1 CDS BPSL0829 NC_006350.1 963171 964499 D Similar to Ralstonia solanacearum probable sugar-binding periplasmic signal peptide protein rsc2144 or rs01459 SWALL:Q8XXH0 (EMBL:AL646068) (441 aa) fasta scores: E(): 6.6e-158, 89.14% id in 442 aa, and to Agrobacterium tumefaciens ABC transporter substrate binding protein atu3165 or agr_l_3289 SWALL:Q8UB52 (EMBL:AE009246) (450 aa) fasta scores: E(): 2.2e-105, 61.15% id in 417 aa; periplasmic ABC transporter substrate-binding component 963171..964499 Burkholderia pseudomallei K96243 3093412 YP_107454.1 CDS BPSL0830 NC_006350.1 964607 965551 D Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc2143 or rs01460 SWALL:Q8XXH1 (EMBL:AL646068) (317 aa) fasta scores: E(): 1.5e-103, 84.12% id in 315 aa, and to Pseudomonas aeruginosa probable binding-protein-dependent maltose/mannitol transport protein pa2339 SWALL:Q9I1D9 (EMBL:AE004660) (310 aa) fasta scores: E(): 2.1e-70, 61.67% id in 287 aa, and to Rhodobacter capsulatus maltose transport inner membrane protein SWALL:O68115 (EMBL:AF010496) (290 aa) fasta scores: E(): 1.6e-69, 62.5% id in 280 aa; transmembrane ABC transporter protein 964607..965551 Burkholderia pseudomallei K96243 3093413 YP_107455.1 CDS BPSL0831 NC_006350.1 965548 966414 D Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc2142 or rs01461 SWALL:Q8XXH2 (EMBL:AL646068) (286 aa) fasta scores: E(): 1.1e-101, 90.62% id in 288 aa, and to Pseudomonas fluorescens probable ABC transporter permease MtlG SWALL:O30493 (EMBL:AF007800) (276 aa) fasta scores: E(): 3e-70, 65.67% id in 268 aa, and to Pseudomonas aeruginosa probable binding-protein-dependent maltose/mannitol transport protein pa2340 SWALL:Q9I1D8 (EMBL:AE004660) (277 aa) fasta scores: E(): 7.3e-70, 66.41% id in 268 aa; ABC transporter permease 965548..966414 Burkholderia pseudomallei K96243 3093253 YP_107456.1 CDS BPSL0832 NC_006350.1 966411 967109 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2141 or rs01462 SWALL:Q8XXH3 (EMBL:AL646068) (232 aa) fasta scores: E(): 2.1e-58, 70.25% id in 232 aa, and to Pseudomonas aeruginosa probable hydrolase pa0562 SWALL:Q9I5X4 (EMBL:AE004492) (224 aa) fasta scores: E(): 9.9e-30, 47.08% id in 223 aa, and to Xanthomonas axonopodis hydrolase xac2883 SWALL:AAM37728 (EMBL:AE011930) (225 aa) fasta scores: E(): 2.4e-27, 45.87% id in 218 aa; haloacid dehalogenase hydrolase 966411..967109 Burkholderia pseudomallei K96243 3093254 YP_107457.1 CDS BPSL0833 NC_006350.1 967116 968282 D Similar to Salmonella typhimurium maltose/maltodextrin transport ATP-binding protein MalK or stm4230 SWALL:MALK_SALTY (SWALL:P19566) (369 aa) fasta scores: E(): 2.6e-62, 54.14% id in 362 aa, and to Ralstonia solanacearum probable sugar ATP-binding ABC transporter protein rsc2140 or rs01463 SWALL:Q8XXH4 (EMBL:AL646068) (369 aa) fasta scores: E(): 1.1e-101, 83.51% id in 370 aa, and to Vibrio cholerae maltose/maltodextrin ABC transporter ATP-binding protein vca0946 SWALL:Q9KL04 (EMBL:AE004421) (373 aa) fasta scores: E(): 1.2e-64, 56.35% id in 362 aa; downstream repeat region (cccgccgc)3 and (cccgccgg)3; Alternative start site at codon 20; sugar ABC transporter protein 967116..968282 Burkholderia pseudomallei K96243 3094475 YP_107458.1 CDS BPSL0834 NC_006350.1 968501 969802 R Similar to Clostridium perfringens hypothetical protein CPE0251 SWALL:Q8XNT1 (EMBL:AP003186) (440 aa) fasta scores: E(): 5e-55, 37.67% id in 422 aa. C-terminal region is similar to Fusobacterium nucleatum phosphoserine phosphatase FN0091 SWALL:Q8RH24 (EMBL:AE010523) (366 aa) fasta scores: E(): 2.5e-38, 35.69% id in 381 aa; downstream repeat region (cccgccgc)3 and (cccgccgg)3; hypothetical protein complement(968501..969802) Burkholderia pseudomallei K96243 3094476 YP_107459.1 CDS BPSL0835 NC_006350.1 970247 971131 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2316 SWALL:Q9I1F9 (EMBL:AE004657) (297 aa) fasta scores: E(): 1.4e-77, 68.02% id in 294 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu4271 or agr_l_1183 SWALL:Q8U828 (EMBL:AE009356) (295 aa) fasta scores: E(): 4.5e-54, 50% id in 294 aa, and to Rhizobium loti transcriptional regulator mll2784 SWALL:Q98HN8 (EMBL:AP003000) (307 aa) fasta scores: E(): 4.1e-53, 50.5% id in 295 aa; downstream repeat region (gcg)4; LysR family transcriptional regulator complement(970247..971131) Burkholderia pseudomallei K96243 3094509 YP_107460.1 CDS BPSL0836 NC_006350.1 971269 972465 D Similar to Pseudomonas aeruginosa hypothetical protein pa2315 SWALL:Q9I1G0 (EMBL:AE004657) (391 aa) fasta scores: E(): 6.8e-89, 67.63% id in 380 aa. C-terminal region is similar to Pseudomonas sp triacylglycerol lipase Lip-1 SWALL:Q9KX30 (EMBL:X61673) (333 aa) fasta scores: E(): 3.2e-76, 66.06% id in 333 aa; peptidase 971269..972465 Burkholderia pseudomallei K96243 3094510 YP_107461.1 CDS BPSL0837 NC_006350.1 972462 973673 D Similar to Erwinia chrysanthemi sugar efflux transporter B SotB SWALL:SOTB_ERWCH (SWALL:Q9S3J9) (395 aa) fasta scores: E(): 5e-23, 29.59% id in 392 aa, and to Pseudomonas aeruginosa probable MFS transporter pa2314 SWALL:Q9I1G1 (EMBL:AE004657) (417 aa) fasta scores: E(): 5.6e-69, 55.52% id in 389 aa; downstream repeat region (gtccgtccggc)3; transporter protein 972462..973673 Burkholderia pseudomallei K96243 3094834 YP_107462.1 CDS BPSL0838 NC_006350.1 973846 974793 R Similar to Bacillus subtilis deoxyribonucleoside regulator DeoR SWALL:DEOR_BACSU (SWALL:P39140) (313 aa) fasta scores: E(): 2.3e-15, 29.74% id in 316 aa, and to Ralstonia solanacearum transcriptional regulator rsc2127 or rs01506 SWALL:Q8XXI6 (EMBL:AL646068) (315 aa) fasta scores: E(): 7.7e-100, 84.98% id in 313 aa, and to Yersinia pestis transcriptional regulatory protein ypo2324 SWALL:Q8ZE59 (EMBL:AJ414152) (318 aa) fasta scores: E(): 6.9e-63, 54.6% id in 315 aa; downstream repeat region (gtccgtccggc)3; transcriptional regulator complement(973846..974793) Burkholderia pseudomallei K96243 3094835 YP_107463.1 CDS dalK NC_006350.1 974880 976361 R Similar to Klebsiella pneumoniae D-xylulose-kinase DalK SWALL:O52719 (EMBL:AF045245) (487 aa) fasta scores: E(): 1.5e-108, 60.87% id in 478 aa, and to Ralstonia solanacearum D-arabinitol kinase rsc2128 or rs01476 SWALL:Q8XXI5 (EMBL:AL646068) (491 aa) fasta scores: E(): 1.7e-154, 82.15% id in 493 aa, and to Escherichia coli xylulose kinase xylB or b3564 SWALL:XYLB_ECOLI (SWALL:P09099) (484 aa) fasta scores: E(): 1.4e-92, 53.68% id in 488 aa; carbohydrate kinase complement(974880..976361) Burkholderia pseudomallei K96243 3092433 YP_107464.1 CDS dalD NC_006350.1 976472 977914 R Similar to Klebsiella pneumoniae D-arabinitol 4-dehydrogenase DalD SWALL:DALD_KLEPN (SWALL:O52720) (455 aa) fasta scores: E(): 4.8e-98, 55.95% id in 445 aa, and to Ralstonia solanacearum D-arabinitol 4-dehydrogenase rsc2129 or rs01475 SWALL:DALD_RALSO (SWALL:P58708) (465 aa) fasta scores: E(): 2.5e-147, 78.66% id in 464 aa, and to Yersinia pestis D-arabinitol 4-dehydrogenase ypo2325 or y2008 SWALL:DALD_YERPE (SWALL:P58709) (463 aa) fasta scores: E(): 2.2e-102, 56.58% id in 463 aa. Possible alternative translational start site after codon 17; D-arabinitol 4-dehydrogenase complement(976472..977914) Burkholderia pseudomallei K96243 3092432 YP_107465.1 CDS BPSL0841 NC_006350.1 978086 979000 R Similar to Bacillus subtilis transcriptional regulatory protein GltC SWALL:GLTC_BACSU (SWALL:P20668) (300 aa) fasta scores: E(): 3.6e-16, 28.32% id in 286 aa, and to Streptomyces coelicolor LysR-family transcriptional regulator sco0925 or scm10.13 SWALL:Q9RCY5 (EMBL:AL133469) (294 aa) fasta scores: E(): 4.1e-18, 33.33% id in 300 aa; LysR family transcriptional regulator complement(978086..979000) Burkholderia pseudomallei K96243 3094739 YP_107466.1 CDS BPSL0842 NC_006350.1 979101 980720 D catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 979101..980720 Burkholderia pseudomallei K96243 3094740 YP_107467.1 CDS BPSL0843 NC_006350.1 980842 982293 D Similar to previously sequenced Burkholderia sp. RP007 dehydrogenase PhnF SWALL:Q9ZHH7 (EMBL:AF061751) (483 aa) fasta scores: E(): 1.1e-103, 61.41% id in 482 aa. Similar to Rhizobium loti dehydrogenase mll7197 SWALL:Q986V2 (EMBL:AP003011) (481 aa) fasta scores: E(): 1.7e-114, 66.73% id in 481 aa, and to Ralstonia solanacearum probable vanillin dehydrogenase oxidoreductase Vdh or rsp0226 or rs05197 SWALL:Q8XT89 (EMBL:AL646077) (484 aa) fasta scores: E(): 2.7e-111, 65.63% id in 483 aa; Alternative start site at codon 11; aldehyde dehydrogenase 980842..982293 Burkholderia pseudomallei K96243 3092711 YP_107468.1 CDS BPSL0844 NC_006350.1 982322 983254 D Similar to Escherichia coli 2-dehydropantoate 2-reductase PanE or ApbA or b0425 SWALL:PANE_ECOLI (SWALL:P77728) (303 aa) fasta scores: E(): 2.8e-07, 27.77% id in 306 aa, and to Salmonella typhimurium ketopantoate reductase stm2573 SWALL:Q8ZN23 (EMBL:AE008817) (305 aa) fasta scores: E(): 1.1e-30, 38.33% id in 313 aa, and to Salmonella typhi oxidoreductase sty2819 SWALL:Q8Z4L0 (EMBL:AL627275) (305 aa) fasta scores: E(): 1.8e-30, 39.17% id in 314 aa; ketopantoate reductase 982322..983254 Burkholderia pseudomallei K96243 3092712 YP_107469.1 CDS BPSL0844a NC_006350.1 983744 983977 D Doubtful CDS. No significant database matches; hypothetical protein 983744..983977 Burkholderia pseudomallei K96243 3091896 YP_107470.1 CDS BPSL0845 NC_006350.1 983974 985368 D Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 6.3e-43, 36.14% id in 451 aa, and to Ralstonia solanacearum 4-hydroxybenzoate transporter transmembrane protein rsc1093 or rs04094 SWALL:Q8Y0F1 (EMBL:AL646062) (454 aa) fasta scores: E(): 6.2e-47, 36.02% id in 458 aa, and to Pseudomonas aeruginosa probable MFS transporter pa2472 SWALL:Q9I110 (EMBL:AE004675) (448 aa) fasta scores: E(): 1.7e-45, 37.13% id in 439 aa; transporter protein 983974..985368 Burkholderia pseudomallei K96243 3091897 YP_107471.1 CDS BPSL0846 NC_006350.1 985394 986314 R Similar to Ralstonia solanacearum oxygenase oxidoreductase rsc0758 or rs05095 SWALL:Q8Y1D2 (EMBL:AL646060) (294 aa) fasta scores: E(): 1.2e-83, 71.13% id in 291 aa. Weakly similar to the N-terminal region of Homo sapiens tryptophan 2,3-dioxygenase TDO2 or TDO SWALL:T23O_HUMAN (SWALL:P48775) (406 aa) fasta scores: E(): 0.011, 28.15% id in 373 aa; tryptophan 2,3-dioxygenase complement(985394..986314) Burkholderia pseudomallei K96243 3092668 YP_107472.1 CDS BPSL0847 NC_006350.1 986413 987663 R Similar to Pseudomonas aeruginosa hypothetical protein pa2080 SWALL:Q9I235 (EMBL:AE004635) (416 aa) fasta scores: E(): 3.6e-112, 66.58% id in 416 aa, and to Ralstonia solanacearum probable hydrolase rsc0759 or rs05094 SWALL:Q8Y1D1 (EMBL:AL646060) (417 aa) fasta scores: E(): 1.3e-111, 67.95% id in 415 aa, and to Rattus norvegicus Kynureninase KynU SWALL:KYNU_RAT (SWALL:P70712) (464 aa) fasta scores: E(): 1.7e-13, 27.98% id in 436 aa, and to Streptomyces clavuligerus isopenicillin N epimerase CefD SWALL:CEFD_STRCL (SWALL:P18549) (397 aa) fasta scores: E(): 2.3e-07, 24.37% id in 402 aa; hypothetical protein complement(986413..987663) Burkholderia pseudomallei K96243 3092669 YP_107473.1 CDS BPSL0848 NC_006350.1 987705 988346 R Similar to Ralstonia solanacearum hypothetical protein rsc0760 or rs05093 SWALL:Q8Y1D0 (EMBL:AL646060) (209 aa) fasta scores: E(): 5.8e-59, 74.87% id in 207 aa, and to Pseudomonas aeruginosa hypothetical protein pa2081 SWALL:Q9I234 (EMBL:AE004635) (213 aa) fasta scores: E(): 5.4e-52, 67.15% id in 207 aa, and to Synechocystis sp. hypothetical protein slr2121 SWALL:P73988 (EMBL:D90911) (215 aa) fasta scores: E(): 4.9e-14, 29.32% id in 208 aa; hypothetical protein complement(987705..988346) Burkholderia pseudomallei K96243 3094257 YP_107474.1 CDS BPSL0849 NC_006350.1 988476 988979 D Similar to Rhizobium meliloti leucine-responsive regulatory protein Lrp or r01568 or smc01223 SWALL:LRP_RHIME (SWALL:P56901) (156 aa) fasta scores: E(): 5.9e-19, 41.78% id in 146 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0761 or rs05092 SWALL:Q8Y1C9 (EMBL:AL646060) (176 aa) fasta scores: E(): 4.1e-37, 65.1% id in 149 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2082 SWALL:Q9I233 (EMBL:AE004636) (158 aa) fasta scores: E(): 1.7e-32, 62.06% id in 145 aa; transcription regulator AsnC 988476..988979 Burkholderia pseudomallei K96243 3094258 YP_107475.1 CDS BPSL0850 NC_006350.1 988966 989481 R Similar to Ralstonia solanacearum monooxygenase oxidoreductase rsc0763 or rs05090 SWALL:Q8Y1C7 (EMBL:AL646060) (191 aa) fasta scores: E(): 2.6e-42, 66.47% id in 170 aa, and to Agrobacterium tumefaciens nitrilotriacetate monooxygenase atu3277 or agr_l_3083 SWALL:Q8UAU0 (EMBL:AE009257) (175 aa) fasta scores: E(): 1.9e-23, 47.23% id in 163 aa. Similar to the N-terminal region of Chelatobacter heintzii nitrilotriacetate monooxygenase component B NtaB or NmoB SWALL:NTAB_CHEHE (SWALL:P54990) (322 aa) fasta scores: E(): 9.3e-20, 41.21% id in 165 aa.; hypothetical protein complement(988966..989481) Burkholderia pseudomallei K96243 3094784 YP_107476.1 CDS BPSL0851 NC_006350.1 989874 990431 D Similar to Erwinia chrysanthemi peptide methionine sulfoxide reductase MsrA SWALL:MSRA_ERWCH (SWALL:Q9ZEQ8) (213 aa) fasta scores: E(): 1.7e-25, 46.87% id in 160 aa, and to Ralstonia solanacearum peptide methionine sulfoxide reductase rsc0764 or rs05089 SWALL:MSRA_RALSO (SWALL:Q8Y1C6) (191 aa) fasta scores: E(): 2.9e-43, 60.21% id in 186 aa, and to Deinococcus radiodurans peptide methionine sulfoxide reductase dr1849 SWALL:MSRA_DEIRA (SWALL:Q9RTB6) (206 aa) fasta scores: E(): 8.3e-40, 56.18% id in 178 aa; peptide methionine sulfoxide reductase 989874..990431 Burkholderia pseudomallei K96243 3094785 YP_107477.1 CDS BPSL0852 NC_006350.1 990788 991951 R Similar to Ralstonia solanacearum hypothetical protein rsc0765 or rs05088 SWALL:Q8Y1C5 (EMBL:AL646060) (355 aa) fasta scores: E(): 3.2e-54, 53.46% id in 346 aa. Alternative start at codon 80; hypothetical protein complement(990788..991951) Burkholderia pseudomallei K96243 3092924 YP_107478.1 CDS BPSL0853 NC_006350.1 992374 993594 R Similar to Ralstonia solanacearum cyclopropane-fatty-acyl-phospholipid synthase Cfa2 or rsc0766 or rs05087 SWALL:Q8Y1C4 (EMBL:AL646060) (406 aa) fasta scores: E(): 1.5e-111, 68.84% id in 398 aa, and to Pseudomonas aeruginosa hypothetical protein pa5546 SWALL:Q9HT28 (EMBL:AE004967) (394 aa) fasta scores: E(): 1.6e-73, 49.11% id in 397 aa, and to Pseudomonas putida hypothetical protein SWALL:YLP3_PSEPU (SWALL:P31049) (394 aa) fasta scores: E(): 7.8e-67, 45.83% id in 384 aa; Upstream repeat (ccgc)3 and downstream repeat (gcg)4; cyclopropane-fatty-acyl-phospholipid synthase complement(992374..993594) Burkholderia pseudomallei K96243 3092925 YP_107479.2 CDS pdxH NC_006350.1 993726 994370 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(993726..994370) Burkholderia pseudomallei K96243 3094226 YP_107480.1 CDS BPSL0855 NC_006350.1 994504 995370 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0774 or rs05080 SWALL:Q8Y1B6 (EMBL:AL646061) (300 aa) fasta scores: E(): 4.9e-51, 60.48% id in 291 aa, and to Salmonella typhimurium paral enzyme stm2987 SWALL:Q8ZMC1 (EMBL:AE008837) (268 aa) fasta scores: E(): 7.7e-50, 53.33% id in 270 aa; ThiF family protein 994504..995370 Burkholderia pseudomallei K96243 3091819 YP_107481.1 CDS BPSL0856 NC_006350.1 995643 996548 R Similar to Ralstonia solanacearum thioredoxin protein rsc0779 or rs05075 SWALL:Q8Y1B1 (EMBL:AL646061) (280 aa) fasta scores: E(): 2.9e-54, 55.51% id in 281 aa, and to Pseudomonas aeruginosa probable thioredoxin pa4061 SWALL:Q9HWW7 (EMBL:AE004822) (289 aa) fasta scores: E(): 1e-32, 42.1% id in 285 aa, and to Xanthomonas axonopodis thioredoxin xac2783 SWALL:AAM37628 (EMBL:AE011919) (286 aa) fasta scores: E(): 9.5e-32, 41.07% id in 280 aa; thioredoxin protein complement(995643..996548) Burkholderia pseudomallei K96243 3091820 YP_107482.1 CDS BPSL0857 NC_006350.1 996545 997426 R Similar to Streptomyces coelicolor hypothetical protein sco0881 or scm1.14C SWALL:Q9RD29 (EMBL:AL133422) (321 aa) fasta scores: E(): 3.4e-32, 38.98% id in 295 aa, and to Pseudomonas aeruginosa hypothetical protein pa1205 SWALL:YC05_PSEAE (SWALL:Q9I4D3) (315 aa) fasta scores: E(): 8e-32, 40.07% id in 257 aa, and to Streptomyces coelicolor hypothetical protein sco7729 or sc8d11.20 SWALL:Q9AJZ9 (EMBL:AL512944) (332 aa) fasta scores: E(): 1.7e-28, 37.36% id in 281 aa, and to Mus musculus pirin PIR SWALL:PIR_MOUSE (SWALL:Q9D711) (290 aa) fasta scores: E(): 8e-18, 31.14% id in 289 aa; hypothetical protein complement(996545..997426) Burkholderia pseudomallei K96243 3093200 YP_107483.1 CDS BPSL0858 NC_006350.1 997611 998495 D Similar to Salmonella typhimurium probable amino acid metabolite efflux pump EamA or stm1517 SWALL:EAMA_SALTY (SWALL:Q56072) (299 aa) fasta scores: E(): 1.4e-53, 53.92% id in 293 aa, and to Ralstonia solanacearum hypothetical transmembrane protein rsc3261 or rs02490 SWALL:Q8XUD0 (EMBL:AL646074) (308 aa) fasta scores: E(): 5.3e-65, 63.54% id in 299 aa, and to Salmonella typhi membrane protein sty1543 SWALL:Q8Z701 (EMBL:AL627270) (300 aa) fasta scores: E(): 1.2e-53, 53.92% id in 293 aa; permease 997611..998495 Burkholderia pseudomallei K96243 3093201 YP_107484.1 CDS BPSL0859 NC_006350.1 999015 1000559 R Similar to Escherichia coli N-acetylmuramoyl-L-alanine amidase AmiC or b2817 SWALL:AMIC_ECOLI (SWALL:Q46929) (417 aa) fasta scores: E(): 1.3e-34, 42.85% id in 490 aa, and to Ralstonia solanacearum probable N-acetylmuramoyl-L-alanine amidase rsc2539 or rs00715 SWALL:Q8XWD5 (EMBL:AL646070) (507 aa) fasta scores: E(): 2.1e-52, 57.39% id in 521 aa, and to Yersinia pestis N-acetylmuramoyl-L-alanine amidase ypo1023 SWALL:Q8ZH85 (EMBL:AJ414146) (416 aa) fasta scores: E(): 4.9e-36, 41.36% id in 498 aa; N-acetylmuramoyl-L-alanine amidase complement(999015..1000559) Burkholderia pseudomallei K96243 3091520 YP_107485.1 CDS BPSL0860 NC_006350.1 1000553 1001107 R Similar to Ralstonia solanacearum hypothetical protein rsc2540 or rs00716 SWALL:Q8XWD4 (EMBL:AL646070) (198 aa) fasta scores: E(): 8.5e-29, 58.28% id in 163 aa, and to Salmonella typhi hypothetical protein sty4714 SWALL:Q8Z189 (EMBL:AL627283) (153 aa) fasta scores: E(): 5.3e-20, 48.79% id in 166 aa, and to Salmonella typhimurium nucleotide-binding protein stm4357 SWALL:Q8ZKA6 (EMBL:AE008904) (153 aa) fasta scores: E(): 8.1e-20, 48.19% id in 166 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein b4168 or z5775 or ecs5144 SWALL:YJEE_ECOLI (SWALL:P31805) (153 aa) fasta scores: E(): 2.2e-19, 48.79% id in 166 aa; hydrolase complement(1000553..1001107) Burkholderia pseudomallei K96243 3091521 YP_107486.1 CDS BPSL0861 NC_006350.1 1001125 1002354 D Similar to Pseudomonas aeruginosa hypothetical protein pa4950 SWALL:Q9HUL4 (EMBL:AE004908) (361 aa) fasta scores: E(): 7.6e-57, 59.15% id in 377 aa, and to Yersinia pestis iron-sulfur cluster-binding protein ypo0367 SWALL:Q8ZIW8 (EMBL:AJ414142) (411 aa) fasta scores: E(): 1e-42, 47.18% id in 409 aa, and to Ralstonia solanacearum iron-sulfur 4Fe-4S ferredoxin protein rsc2541 or rs00718 SWALL:Q8XWD3 (EMBL:AL646070) (360 aa) fasta scores: E(): 8.8e-39, 64.45% id in 377 aa. Possible alternative translational start site; 4Fe-4S cluster-binding ferredoxin protein 1001125..1002354 Burkholderia pseudomallei K96243 3093656 YP_107487.1 CDS BPSL0862 NC_006350.1 1002367 1002891 D Similar to Salmonella typhimurium, and Salmonella typhi methylated-DNA--protein-cysteine methyltransferase Ogt or stm1659 or sty1405 SWALL:OGT_SALTY (SWALL:P37429) (171 aa) fasta scores: E(): 2.7e-12, 43.18% id in 132 aa, and to Ralstonia solanacearum probable methylated-DNA--protein-cysteine methyltransferase rsc2543 or rs00722 SWALL:Q8XWD1 (EMBL:AL646070) (173 aa) fasta scores: E(): 2.6e-38, 57.31% id in 164 aa, and to Chlorobium tepidum methylated-DNA-protein-cysteine methyltransferase ct1289 SWALL:AAM72519 (EMBL:AE012888) (165 aa) fasta scores: E(): 1.2e-15, 39.86% id in 148 aa; methylated-DNA--protein-cysteine methyltransferase 1002367..1002891 Burkholderia pseudomallei K96243 3093657 YP_107488.2 CDS xerD NC_006350.1 1002975 1003892 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1002975..1003892 Burkholderia pseudomallei K96243 3092584 YP_107489.1 CDS BPSL0864 NC_006350.1 1004177 1005742 R Similar to Streptomyces coelicolor probable long-chain-fatty-acid-CoA ligase sco6968 or sc6f7.21 SWALL:Q9KZC1 (EMBL:AL353870) (511 aa) fasta scores: E(): 2.7e-47, 37.37% id in 511 aa, and to Thermoanaerobacter tengcongensis acyl-CoA synthetases tte1960 SWALL:Q8R8N5 (EMBL:AE013147) (495 aa) fasta scores: E(): 2.8e-44, 33.53% id in 489 aa; AMP-binding enzyme complement(1004177..1005742) Burkholderia pseudomallei K96243 3093176 YP_107490.1 CDS BPSL0865 NC_006350.1 1005872 1006363 D Similar to Ralstonia solanacearum hypothetical protein rsc2545 or rs00724 SWALL:Q8XWC9 (EMBL:AL646070) (163 aa) fasta scores: E(): 7.9e-50, 76.39% id in 161 aa, and to Neisseria meningitidis hypothetical protei nma1462 SWALL:Q9JU74 (EMBL:AL162756) (159 aa) fasta scores: E(): 3.5e-30, 49.36% id in 158 aa, and to Neisseria meningitidis hypothetical protein nmb1026 SWALL:Q9JZJ3 (EMBL:AE002453) (159 aa) fasta scores: E(): 4.8e-30, 49.36% id in 158 aa; hypothetical protein 1005872..1006363 Burkholderia pseudomallei K96243 3093177 YP_107491.1 CDS BPSL0866 NC_006350.1 1006472 1007083 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 1006472..1007083 Burkholderia pseudomallei K96243 3094044 YP_107492.1 CDS BPSL0867 NC_006350.1 1007313 1007798 R nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein complement(1007313..1007798) Burkholderia pseudomallei K96243 3094045 YP_107493.1 CDS murB NC_006350.1 1007935 1008984 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1007935..1008984 Burkholderia pseudomallei K96243 3091554 YP_107494.1 CDS argF NC_006350.1 1009176 1010105 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(1009176..1010105) Burkholderia pseudomallei K96243 3092982 YP_107495.1 CDS BPSL0870 NC_006350.1 1010519 1010854 D Similar to Ralstonia solanacearum hypothetical protein rsc2555 or rs00734 SWALL:Q8XWB9 (EMBL:AL646070) (117 aa) fasta scores: E(): 4.7e-20, 56.25% id in 96 aa, and to Neisseria meningitidis hypothetical protein nma0169 SWALL:Q9JWY5 (EMBL:AL162752) (280 aa) fasta scores: E(): 1e-11, 45.16% id in 93 aa, and to Neisseria meningitidis phno-related protein nmb0105 SWALL:Q9K1L0 (EMBL:AE002369) (280 aa) fasta scores: E(): 1.2e-11, 45.16% id in 93 aa; hypothetical protein 1010519..1010854 Burkholderia pseudomallei K96243 3093781 YP_107496.1 CDS rpsT NC_006350.1 1011098 1011376 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(1011098..1011376) Burkholderia pseudomallei K96243 3094377 YP_107497.1 CDS BPSL0872 NC_006350.1 1011781 1013331 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2557 or rs00736 SWALL:Q8XWB7 (EMBL:AL646070) (517 aa) fasta scores: E(): 2.3e-128, 65.69% id in 516 aa, and to Yersinia pestis membrane protein ypo2043 SWALL:Q8ZEW0 (EMBL:AJ414151) (511 aa) fasta scores: E(): 9.6e-97, 52.7% id in 518 aa, and to Escherichia coli, and Escherichia coli O157:H7 virulence factor MviN homolog b1069 or z1707 or ecs1447 SWALL:MVIN_ECOLI (SWALL:P75932) (511 aa) fasta scores: E(): 2.6e-96, 52.23% id in 515 aa; MviN-like protein 1011781..1013331 Burkholderia pseudomallei K96243 3093782 YP_107498.1 CDS BPSL0873 NC_006350.1 1013341 1014183 D Similar to Ralstonia solanacearum hypothetical protein rsc2558 or rs00740 SWALL:Q8XWB6 (EMBL:AL646070) (281 aa) fasta scores: E(): 4.2e-61, 58.27% id in 278 aa, and to Xylella fastidiosa hypothetical protein xf1494 SWALL:YE94_XYLFA (SWALL:Q9PD85) (281 aa) fasta scores: E(): 4.3e-33, 38.84% id in 278 aa, and to Xanthomonas campestris hypothetical protein xcc3267 SWALL:AAM42537 (EMBL:AE012443) (293 aa) fasta scores: E(): 8.7e-32, 39.06% id in 279 aa; hypothetical protein 1013341..1014183 Burkholderia pseudomallei K96243 3091632 YP_107499.1 CDS BPSL0874 NC_006350.1 1014452 1015210 R Similar to Ralstonia solanacearum probable 3-hydroxyacyl-CoA dehydrogenase type II oxidoreductase rsc2534 or rs05766 SWALL:Q8XWE0 (EMBL:AL646070) (252 aa) fasta scores: E(): 2.2e-67, 77.77% id in 252 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa2554 SWALL:Q9I0T0 (EMBL:AE004683) (255 aa) fasta scores: E(): 1.4e-56, 66.66% id in 255 aa, and to Brucella melitensis 3-oxoacyl-(acyl-carrier protein) reductase bmeii0816 SWALL:Q8YBS0 (EMBL:AE009715) (255 aa) fasta scores: E(): 7e-56, 65.88% id in 255 aa; short-chain dehydrogenase complement(1014452..1015210) Burkholderia pseudomallei K96243 3091633 YP_107500.1 CDS adk NC_006350.1 1015408 1016070 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(1015408..1016070) Burkholderia pseudomallei K96243 3091823 YP_107501.2 CDS kdsB NC_006350.1 1016279 1017070 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(1016279..1017070) Burkholderia pseudomallei K96243 3091448 YP_107502.1 CDS BPSL0877 NC_006350.1 1017244 1017450 R Similar to Ralstonia solanacearum hypothetical protein rsc2531 or rs05763 SWALL:Q8XWE3 (EMBL:AL646070) (62 aa) fasta scores: E(): 1.9e-19, 82.25% id in 62 aa, and to Caulobacter crescentus hypothetical protein cc0108 SWALL:Q9ABW2 (EMBL:AE005685) (65 aa) fasta scores: E(): 3.4e-11, 62.5% id in 56 aa, and to Vibrio cholerae hypothetical protein vc1876 SWALL:Q9KQX1 (EMBL:AE004263) (59 aa) fasta scores: E(): 4.4e-11, 64.7% id in 51 aa; hypothetical protein complement(1017244..1017450) Burkholderia pseudomallei K96243 3092049 YP_107503.1 CDS BPSL0878 NC_006350.1 1017431 1018459 R Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(1017431..1018459) Burkholderia pseudomallei K96243 3092050 YP_107504.1 CDS xseA NC_006350.1 1018910 1020292 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1018910..1020292 Burkholderia pseudomallei K96243 3091647 YP_107505.1 CDS sodB NC_006350.1 1020489 1021067 D Similar to Bordetella pertussis superoxide dismutase [Fe] SodB SWALL:SODF_BORPE (SWALL:P37369) (192 aa) fasta scores: E(): 6.4e-69, 83.33% id in 192 aa, and to Ralstonia solanacearum probable superoxide dismutase rsc2526 or rs01055 SWALL:Q8XWE8 (EMBL:AL646070) (192 aa) fasta scores: E(): 1.2e-70, 85.41% id in 192 aa; superoxide dismutase 1020489..1021067 Burkholderia pseudomallei K96243 3094563 YP_107506.1 CDS BPSL0881 NC_006350.1 1021502 1022770 D hypothetical protein 1021502..1022770 Burkholderia pseudomallei K96243 3091648 YP_107507.1 CDS BPSL0882 NC_006350.1 1023539 1024744 R Similar to Pseudomonas aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE (SWALL:P14285) (416 aa) fasta scores: E(): 1.4e-19, 29% id in 400 aa, and to Pseudomonas aeruginosa probable transporter pa4289 SWALL:Q9HWB1 (EMBL:AE004845) (401 aa) fasta scores: E(): 2.8e-88, 65.23% id in 397 aa, and to Agrobacterium tumefaciens chromate transport protein atu3079 or agr_l_3461 SWALL:Q8UBD7 (EMBL:AE009239) (409 aa) fasta scores: E(): 6.2e-75, 55.61% id in 392 aa; downstream repeat region; chromate transporter protein complement(1023539..1024744) Burkholderia pseudomallei K96243 3092758 YP_107508.1 CDS BPSL0883 NC_006350.1 1024978 1025733 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0275 SWALL:Q9I6L5 (EMBL:AE004465) (228 aa) fasta scores: E(): 1.1e-40, 56.3% id in 222 aa, and to Ralstonia solanacearum transcription regulator protein rsp0805 or rs01902 SWALL:Q8XRM6 (EMBL:AL646081) (239 aa) fasta scores: E(): 3.7e-38, 52.21% id in 226 aa; regulatory protein complement(1024978..1025733) Burkholderia pseudomallei K96243 3092759 YP_107509.1 CDS BPSL0884 NC_006350.1 1025818 1026345 D Similar to Pseudomonas aeruginosa hypothetical protein pa0276 SWALL:Q9I6L4 (EMBL:AE004465) (171 aa) fasta scores: E(): 7e-44, 69.71% id in 175 aa, and to Pseudomonas putida Prs2-like protein SWALL:Q9WWZ6 (EMBL:AF031417) (174 aa) fasta scores: E(): 3.2e-40, 62.85% id in 175 aa; hypothetical protein 1025818..1026345 Burkholderia pseudomallei K96243 3093944 YP_107510.1 CDS BPSL0885 NC_006350.1 1026361 1027386 D catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 1026361..1027386 Burkholderia pseudomallei K96243 3093945 YP_107511.1 CDS BPSL0886 NC_006350.1 1027910 1028515 D Similar to Ralstonia solanacearum hypothetical protein rsc3026 or rs04731 SWALL:Q8XV06 (EMBL:AL646073) (196 aa) fasta scores: E(): 1e-40, 58.67% id in 196 aa; upstream repeat region (tgccgagt)3; hypothetical protein 1027910..1028515 Burkholderia pseudomallei K96243 3091854 YP_107512.1 CDS BPSL0887 NC_006350.1 1028626 1029900 R Weakly similar to Clostridium acetobutylicum sensory protein, containing EAL-domain cac0322 SWALL:Q97M76 (EMBL:AE007546) (412 aa) fasta scores: E(): 4.5e-19, 25.76% id in 392 aa, and to Rhizobium loti hypothetical protein mll2537 SWALL:Q98I70 (EMBL:AP002999) (282 aa) fasta scores: E(): 2.8e-14, 31.22% id in 237 aa; upstream repeat region (cccgaacgcccgaacgcccgaacg)3 and (cccgaaca)3; hypothetical protein complement(1028626..1029900) Burkholderia pseudomallei K96243 3091855 YP_107513.1 CDS BPSL0888 NC_006350.1 1030572 1032011 R Similar to Ralstonia solanacearum probable transporter transmembrane protein rsp1278 or rs05323 SWALL:Q8XQE9 (EMBL:AL646083) (476 aa) fasta scores: E(): 1.2e-105, 61.7% id in 470 aa, and to Xanthomonas campestris MFS transporter EmrA or xcc2845 SWALL:AAM42117 (EMBL:AE012397) (473 aa) fasta scores: E(): 9.4e-98, 58.35% id in 461 aa; downstream repeat region (cccgaacgcccgaacgcccgaacg)3 and (cccgaaca)3; transporter protein complement(1030572..1032011) Burkholderia pseudomallei K96243 3093849 YP_107514.1 CDS BPSL0889 NC_006350.1 1032308 1032643 D Doubtful CDS. No significant hits in the databases; hypothetical protein 1032308..1032643 Burkholderia pseudomallei K96243 3093850 YP_107515.1 CDS BPSL0890 NC_006350.1 1032616 1033968 R C-terminal region is similar to Agrobacterium tumefaciens citrate synthase CisZ or atu4851 or agr_l_71 SWALL:Q8U6F6 (EMBL:AE009414) (335 aa) fasta scores: E(): 6.7e-14, 42.68% id in 335 aa, and to Staphylococcus aureus citrate synthase II CitZ SWALL:Q99TG7 (EMBL:AP003363) (373 aa) fasta scores: E(): 4.7e-13, 27.36% id in 391 aa. Possible alternative translational start site; citrate synthase complement(1032616..1033968) Burkholderia pseudomallei K96243 3093797 YP_107516.1 CDS BPSL0891 NC_006350.1 1034684 1035430 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3757 SWALL:Q9HXN8 (EMBL:AE004794) (247 aa) fasta scores: E(): 2.5e-56, 63.71% id in 248 aa, and to Xanthomonas campestris transcriptional regulator GntR family xcc3414 SWALL:AAM42684 (EMBL:AE012460) (255 aa) fasta scores: E(): 9.6e-47, 52.67% id in 243 aa; GntR family transcriptional regulator complement(1034684..1035430) Burkholderia pseudomallei K96243 3093798 YP_107517.1 CDS BPSL0892 NC_006350.1 1035599 1036444 D Similar to Rhizobium loti probable oxidoreductase mlr5327 SWALL:Q98C22 (EMBL:AP003006) (281 aa) fasta scores: E(): 1.6e-58, 55.16% id in 281 aa, and to Rhizobium meliloti oxidoreductase r02112 or smc01429 SWALL:Q92NR7 (EMBL:AL591789) (281 aa) fasta scores: E(): 4.6e-56, 56.22% id in 281 aa, and to Agrobacterium tumefaciens aldo/keto reductase atu2032 or agr_c_3682 SWALL:Q8UDT7 (EMBL:AE009154) (281 aa) fasta scores: E(): 2.4e-52, 51.95% id in 281 aa; aldo/keto reductase 1035599..1036444 Burkholderia pseudomallei K96243 3094218 YP_107518.1 CDS BPSL0892a NC_006350.1 1036989 1038575 R No significant database matches. C-terminal region of the CDS in glycine rich and contains contains repeat regions; lipoprotein complement(1036989..1038575) Burkholderia pseudomallei K96243 3094219 YP_107519.1 CDS fusA NC_006350.1 1039748 1041862 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(1039748..1041862) Burkholderia pseudomallei K96243 3092467 YP_107520.1 CDS BPSL0894 NC_006350.1 1042163 1042672 R Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2494 or rs01102 SWALL:Q8XWI0 (EMBL:AL646070) (150 aa) fasta scores: E(): 4.3e-26, 53.37% id in 148 aa, and to Rhizobium meliloti hypothetical signal peptide protein r01717 or smc00288 SWALL:Q92PM3 (EMBL:AL591788) (163 aa) fasta scores: E(): 5.6e-10, 36.25% id in 160 aa; hypothetical protein complement(1042163..1042672) Burkholderia pseudomallei K96243 3092782 YP_107521.1 CDS BPSL0895 NC_006350.1 1043345 1043923 R Similar to Escherichia coli O157:H7 orf, hypothetical protein YmfC or z1864 or ecs1607 SWALL:Q8X724 (EMBL:AE005329) (217 aa) fasta scores: E(): 1.8e-30, 51.41% id in 177 aa, and to Salmonella typhimurium ribosomal large subunit pseudouridine synthase YmfC or stm1237 SWALL:Q8ZPZ1 (EMBL:AE008754) (221 aa) fasta scores: E(): 1.8e-30, 50.56% id in 178 aa; pseudouridine synthase complement(1043345..1043923) Burkholderia pseudomallei K96243 3092783 YP_107522.1 CDS icd NC_006350.1 1044191 1045450 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1044191..1045450 Burkholderia pseudomallei K96243 3092199 YP_107523.1 CDS BPSL0897 NC_006350.1 1045618 1047237 D Similar to Escherichia coli blue copper oxidase CueO SWALL:CUEO_ECOLI (SWALL:P36649) (516 aa) fasta scores: E(): 1.1e-20, 32.62% id in 472 aa, and to Pasteurella multocida hypothetical protein pm1938 SWALL:Q9CJQ6 (EMBL:AE006230) (515 aa) fasta scores: E(): 2.8e-65, 45.83% id in 504 aa, and to Campylobacter jejuni periplasmic oxidoreductase cj1516 SWALL:Q9PME8 (EMBL:AL139078) (513 aa) fasta scores: E(): 2e-36, 38.89% id in 545 aa; multicopper oxidase 1045618..1047237 Burkholderia pseudomallei K96243 3093301 YP_107524.1 CDS BPSL0898 NC_006350.1 1047367 1047570 R Similar to Bordetella pertussis cold shock-like protein CspA SWALL:CSPA_BORPE (SWALL:Q9Z5R4) (67 aa) fasta scores: E(): 4.1e-15, 64.61% id in 65 aa, and to Myxococcus xanthus CspB SWALL:Q9ZFK8 (EMBL:AF098529) (66 aa) fasta scores: E(): 1.1e-15, 68.18% id in 66 aa, and to Shewanella violacea cold shock-like protein CspA SWALL:Q9S1B7 (EMBL:AB015429) (70 aa) fasta scores: E(): 1.4e-15, 70.31% id in 64 aa; cold shock-like protein complement(1047367..1047570) Burkholderia pseudomallei K96243 3093302 YP_107525.1 CDS clpS NC_006350.1 1048103 1048417 D involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1048103..1048417 Burkholderia pseudomallei K96243 3091700 YP_107526.1 CDS clpA NC_006350.1 1048414 1050714 D Similar to Escherichia coli, and Escherichia coli O157:H7 ATP-dependent Clp protease ATP-binding subunit ClpA or LopD or b0882 or z1119 or ecs0968 SWALL:CLPA_ECOLI (SWALL:P15716) (758 aa) fasta scores: E(): 2.4e-163, 61.6% id in 750 aa, and to Ralstonia solanacearum probable ATP-dependent protease ClpA or rsc2464 or rs01141 SWALL:Q8XWL0 (EMBL:AL646070) (762 aa) fasta scores: E(): 0, 87.53% id in 762 aa, and to Pseudomonas aeruginosa ATP-binding protease component ClpA or pa2620 SWALL:Q9I0L8 (EMBL:AE004690) (758 aa) fasta scores: E(): 4.2e-175, 65.74% id in 762 aa; ATP-dependent Clp protease ATP-binding subunit 1048414..1050714 Burkholderia pseudomallei K96243 3092761 YP_107527.1 CDS BPSL0900 NC_006350.1 1050814 1052190 D Similar to Escherichia coli phenylalanine-specific permease PheP or b0576 SWALL:PHEP_ECOLI (SWALL:P24207) (458 aa) fasta scores: E(): 6.1e-58, 38.06% id in 444 aa, and to Pseudomonas aeruginosa probable amino acid permease pa2079 SWALL:Q9I236 (EMBL:AE004635) (468 aa) fasta scores: E(): 2.1e-101, 65.16% id in 445 aa, and to Pseudomonas aeruginosa probable amino acid permease pa0789 SWALL:Q9I5E9 (EMBL:AE004514) (471 aa) fasta scores: E(): 5.8e-59, 38.68% id in 442 aa; amino acid permease 1050814..1052190 Burkholderia pseudomallei K96243 3091701 YP_107528.1 CDS BPSL0901 NC_006350.1 1052263 1053006 D C-terminal region is weakly similar to Xanthomonas campestris hypothetical protein xcc0131 SWALL:AAM39450 (EMBL:AE012108) (223 aa) fasta scores: E(): 0.042, 24.61% id in 195 aa; hypothetical protein 1052263..1053006 Burkholderia pseudomallei K96243 3092059 YP_107529.1 CDS BPSL0902 NC_006350.1 1053171 1053953 D Similar to Ralstonia solanacearum probable transmembrane protein rsc3405 or rs01714 SWALL:Q8XTZ0 (EMBL:AL646075) (261 aa) fasta scores: E(): 1.9e-55, 64.87% id in 242 aa, and to Chlorobium tepidum hypothetical protein ct0197 SWALL:AAM71445 (EMBL:AE012799) (263 aa) fasta scores: E(): 1e-44, 53.08% id in 243 aa. CDS is truncated at the N-terminus in comparison to orthologues; Repeat motif found as four tandem repeats with two transmembrane regions and a conserved Trp; hypothetical protein 1053171..1053953 Burkholderia pseudomallei K96243 3092060 YP_107530.1 CDS dut NC_006350.1 1054042 1054488 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(1054042..1054488) Burkholderia pseudomallei K96243 3094626 YP_107531.1 CDS dfp NC_006350.1 1054552 1055763 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(1054552..1055763) Burkholderia pseudomallei K96243 3093572 YP_107532.1 CDS lspA NC_006350.1 1055825 1056325 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(1055825..1056325) Burkholderia pseudomallei K96243 3092476 YP_107533.1 CDS ileS NC_006350.1 1056325 1059162 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(1056325..1059162) Burkholderia pseudomallei K96243 3092378 YP_107534.1 CDS BPSL0907 NC_006350.1 1059274 1060266 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(1059274..1060266) Burkholderia pseudomallei K96243 3092320 YP_107535.1 CDS purN NC_006350.1 1060391 1061053 D glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 1060391..1061053 Burkholderia pseudomallei K96243 3092878 YP_107536.1 CDS BPSL0909 NC_006350.1 1061050 1062312 D Similar to Ralstonia solanacearum hypothetical protein rsc2453 or rs01153 SWALL:Q8XWM1 (EMBL:AL646070) (417 aa) fasta scores: E(): 1.6e-101, 63.78% id in 417 aa, and to Neisseria meningitidis Fmu and Fmv protein, nmb1351 SWALL:Q9JZ03 (EMBL:AE002483) (418 aa) fasta scores: E(): 5.9e-75, 52.54% id in 413 aa, and to Neisseria meningitidis sun-family protein nma1563 SWALL:Q9JTZ9 (EMBL:AL162756) (418 aa) fasta scores: E(): 6.5e-73, 51.09% id in 413 aa; NOL1/NOP2/Sun family protein 1061050..1062312 Burkholderia pseudomallei K96243 3092321 YP_107537.1 CDS BPSL0910 NC_006350.1 1062324 1063676 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2451 or rs01155 SWALL:Q8XWM3 (EMBL:AL646070) (447 aa) fasta scores: E(): 3.2e-71, 47.19% id in 445 aa, and to Rhizobium meliloti hypothetical protein ra0860 or sma1582 SWALL:Q92YL3 (EMBL:AE007272) (432 aa) fasta scores: E(): 2e-33, 32.18% id in 435 aa; mechanosensitive ion channel protein 1062324..1063676 Burkholderia pseudomallei K96243 3094129 YP_107538.1 CDS BPSL0911 NC_006350.1 1063873 1065069 D Similar to Azotobacter vinelandii stearoyl-CoA desaturase SWALL:Q59162 (EMBL:U37517) (367 aa) fasta scores: E(): 7.9e-71, 50.56% id in 356 aa, and to Ralstonia solanacearum stearoyl-CoA desaturase oxidoreductase rsc2450 or rs01156 SWALL:Q8XWM4 (EMBL:AL646070) (398 aa) fasta scores: E(): 3.6e-116, 68.17% id in 399 aa, and to Pseudomonas aeruginosa probable fatty acid desaturase pa0286 SWALL:Q9I6K4 (EMBL:AE004466) (392 aa) fasta scores: E(): 6.1e-85, 54.49% id in 389 aa; transmembrane fatty acid desaturase 1063873..1065069 Burkholderia pseudomallei K96243 3094130 YP_107539.1 CDS nadA NC_006350.1 1065238 1066374 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1065238..1066374 Burkholderia pseudomallei K96243 3092397 YP_107540.1 CDS nadC NC_006350.1 1066371 1067255 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 1066371..1067255 Burkholderia pseudomallei K96243 3092498 YP_107541.1 CDS nadB NC_006350.1 1067448 1069094 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(1067448..1069094) Burkholderia pseudomallei K96243 3092497 YP_107542.1 CDS rpmG NC_006350.1 1069217 1069384 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(1069217..1069384) Burkholderia pseudomallei K96243 3092638 YP_107543.1 CDS rpmB NC_006350.1 1069402 1069635 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(1069402..1069635) Burkholderia pseudomallei K96243 3092490 YP_107544.1 CDS radC NC_006350.1 1069929 1070639 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(1069929..1070639) Burkholderia pseudomallei K96243 3093257 YP_107545.1 CDS BPSL0918 NC_006350.1 1070904 1071359 D Similar to Escherichia coli, and Escherichia coli O157:H7 FkbP-type peptidyl-prolyl cis-trans isomerase FkpB or SlpA or b0028 or z0033 or ecs0031 SWALL:FKBX_ECOLI (SWALL:P22563) (148 aa) fasta scores: E(): 2.3e-14, 40.55% id in 143 aa, and to Ralstonia solanacearum probable FkbP-type peptidyl-prolyl cis-trans isomerase FkpB or rsc2443 or rs01351 SWALL:Q8XWN1 (EMBL:AL646070) (144 aa) fasta scores: E(): 1.4e-38, 71.32% id in 143 aa, and to Pseudomonas fluorescens probable FkbP-type peptidyl-prolyl cis-trans isomerase YaaD SWALL:FKBX_PSEFL (SWALL:P21863) (150 aa) fasta scores: E(): 8.1e-15, 39.45% id in 147 aa; FkpB-type peptidyl-prolyl cis-trans isomerase 1070904..1071359 Burkholderia pseudomallei K96243 3093258 YP_107546.1 CDS ispH NC_006350.1 1071362 1072342 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1071362..1072342 Burkholderia pseudomallei K96243 3093936 YP_107547.1 CDS BPSL0919A NC_006350.1 1072599 1073120 D Doubtful CDS. No significant database matches; hypothetical protein 1072599..1073120 Burkholderia pseudomallei K96243 3092180 YP_107548.1 CDS BPSL0920 NC_006350.1 1073343 1074293 D Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease BraD or pa1073 SWALL:BRAD_PSEAE (SWALL:P21627) (307 aa) fasta scores: E(): 3.1e-45, 49.18% id in 307 aa, and to Ralstonia solanacearum amino-acid transmembrane ABC transporter protein rsc2440 or rs01355 SWALL:Q8XWN3 (EMBL:AL646070) (311 aa) fasta scores: E(): 4.7e-81, 75.94% id in 316 aa; amino-acid transport permease 1073343..1074293 Burkholderia pseudomallei K96243 3092181 YP_107549.1 CDS BPSL0921 NC_006350.1 1074304 1075473 D Similar to the C-terminal region of Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease BraE or pa1072 SWALL:BRAE_PSEAE (SWALL:P21628) (417 aa) fasta scores: E(): 3.3e-41, 44.56% id in 359 aa. Full length CDS is similar to and to Ralstonia solanacearum probable amino-acid transmembrane ABC transporter protein rsc2439 or rs02663 SWALL:Q8XWN4 (EMBL:AL646070) (378 aa) fasta scores: E(): 1.2e-100, 68.08% id in 376 aa; transport system permease 1074304..1075473 Burkholderia pseudomallei K96243 3092287 YP_107550.1 CDS BPSL0922 NC_006350.1 1075536 1076309 D Similar to Streptococcus pneumoniae R6 ABC transporter ATP-binding protein-branched chain amino acid transport LivG SWALL:AAK99466 (EMBL:AE008443) (254 aa) fasta scores: E(): 8.6e-36, 50.4% id in 248 aa, and to Ralstonia solanacearum probable amino acid ATP-binding ABC transporter protein rsc2438 or rs02664 SWALL:Q8XWN5 (EMBL:AL646070) (257 aa) fasta scores: E(): 1.4e-64, 81.71% id in 257 aa, and to Ralstonia solanacearum probable amino-acid ATP-binding ABC transporter protein rsp0016 or rs01988 SWALL:Q8XTT8 (EMBL:AL646076) (265 aa) fasta scores: E(): 2.6e-40, 54.25% id in 247 aa; Possible branched-chain amino acid transporter; ABC transporter ATP-binding protein 1075536..1076309 Burkholderia pseudomallei K96243 3092288 YP_107551.1 CDS BPSL0923 NC_006350.1 1076309 1077025 D Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 1e-36, 49.14% id in 234 aa, and to Ralstonia solanacearum probable amino acid ATP-binding ABC transporter protein rsc2437 or rs02666 SWALL:Q8XWN6 (EMBL:AL646070) (244 aa) fasta scores: E(): 5.1e-61, 78.99% id in 238 aa, and to Thermotoga maritima branched chain amino acid ABC transporter ATP-binding protein tm1139 SWALL:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 1.1e-41, 54.43% id in 237 aa; ATP-binding ABC transporter protein 1076309..1077025 Burkholderia pseudomallei K96243 3093053 YP_107552.1 CDS BPSL0924 NC_006350.1 1077328 1077996 D Poor database matches. Weakly similar to Ralstonia solanacearum hypothetical protein rsc1547 or rs05234 SWALL:Q8XZ57 (EMBL:AL646065) (242 aa) fasta scores: E(): 0.71, 25.4% id in 248 aa; hypothetical protein 1077328..1077996 Burkholderia pseudomallei K96243 3093054 YP_107553.1 CDS BPSL0925 NC_006350.1 1078146 1078604 R Similar to Yersinia pestis acetyltransferase ypo3031 SWALL:Q8ZCG0 (EMBL:AJ414155) (141 aa) fasta scores: E(): 5e-16, 41.25% id in 143 aa, and to Escherichia coli O157:H7 hypothetical protein Z3699 z3699 or ecs3305 SWALL:Q8XBI6 (EMBL:AE005473) (178 aa) fasta scores: E(): 1.8e-15, 41.49% id in 147 aa; acetyltransferase complement(1078146..1078604) Burkholderia pseudomallei K96243 3094208 YP_107554.1 CDS argD NC_006350.1 1078621 1079805 R DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase complement(1078621..1079805) Burkholderia pseudomallei K96243 3094209 YP_107555.1 CDS BPSL0927 NC_006350.1 1080082 1081113 R catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase complement(1080082..1081113) Burkholderia pseudomallei K96243 3094804 YP_107556.1 CDS BPSL0928 NC_006350.1 1081196 1082221 D Similar to Ralstonia solanacearum oxidoreductase rsc2433 or rs02671 SWALL:Q8XWP0 (EMBL:AL646070) (341 aa) fasta scores: E(): 6.2e-62, 59.69% id in 330 aa, and to Rhizobium loti hypothetical protein mlr4637 SWALL:Q98DM4 (EMBL:AP003004) (299 aa) fasta scores: E(): 1.2e-12, 32.39% id in 321 aa; hypothetical protein 1081196..1082221 Burkholderia pseudomallei K96243 3094805 YP_107557.1 CDS BPSL0929 NC_006350.1 1082214 1082486 R hypothetical protein complement(1082214..1082486) Burkholderia pseudomallei K96243 3093273 YP_107558.1 CDS BPSL0930 NC_006350.1 1082519 1083241 R Similar to Escherichia coli, and Escherichia coli O157:H7 ribosomal small subunit pseudouridine synthase A RsuA or b2183 or z3442 or ecs3075 SWALL:RSUA_ECOLI (SWALL:P33918) (231 aa) fasta scores: E(): 1.3e-22, 37.44% id in 235 aa, and to Ralstonia solanacearum probable ribosomal small subunit pseudouridine synthase A protein RsuA or rsc0674 or rs01579 SWALL:Q8Y1L6 (EMBL:AL646060) (252 aa) fasta scores: E(): 5.2e-50, 58.12% id in 234 aa, and to Neisseria meningitidis ribosomal small subunit pseudouridine synthase nma1508 or nmb1298 SWALL:Q9JQL5 (EMBL:AL162756) (230 aa) fasta scores: E(): 2.4e-34, 43.91% id in 230 aa; ribosomal small subunit pseudouridine synthase A complement(1082519..1083241) Burkholderia pseudomallei K96243 3093274 YP_107559.1 CDS BPSL0931 NC_006350.1 1083389 1083754 D Similar to Escherichia coli copper resistance protein C precursor PcoC SWALL:PCOC_ECOLI (SWALL:Q47454) (126 aa) fasta scores: E(): 1.7e-07, 35.15% id in 128 aa, and to Salmonella typhimurium homolog of Cu resistance protein CopC yobA or stm1875 SWALL:Q8ZNX1 (EMBL:AE008783) (124 aa) fasta scores: E(): 8.2e-10, 37.09% id in 124 aa; copper resistance protein 1083389..1083754 Burkholderia pseudomallei K96243 3092964 YP_107560.1 CDS BPSL0932 NC_006350.1 1083766 1084728 R Similar to Neisseria meningitidis LysR family transcriptional regulator CrgA SWALL:Q9JPU9 (EMBL:AF190471) (299 aa) fasta scores: E(): 9.6e-35, 39.72% id in 292 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3124 SWALL:Q9HZA0 (EMBL:AE004736) (303 aa) fasta scores: E(): 4.9e-63, 57.96% id in 295 aa, and to Rhizobium loti transcriptional regulator mll4082 SWALL:Q98EU3 (EMBL:AP003003) (301 aa) fasta scores: E(): 3.6e-62, 56.56% id in 297 aa; LysR family transcriptional regulator complement(1083766..1084728) Burkholderia pseudomallei K96243 3092965 YP_107561.1 CDS BPSL0933 NC_006350.1 1084930 1085826 R Similar to Pectobacterium carotovorum subsp. atrosepticum regulator of exoenzyme virulence factors HexA SWALL:O85276 (EMBL:AF057064) (316 aa) fasta scores: E(): 1.1e-24, 32.54% id in 298 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3995 SWALL:Q9HX26 (EMBL:AE004817) (297 aa) fasta scores: E(): 5.9e-77, 71.23% id in 292 aa, and to Streptomyces coelicolor LysR-type transcriptional regulator sco6555 or sc4b5.05C SWALL:Q9ZBW3 (EMBL:AL034443) (292 aa) fasta scores: E(): 5.8e-31, 41.42% id in 280 aa; LysR family transcriptional regulator complement(1084930..1085826) Burkholderia pseudomallei K96243 3092899 YP_107562.1 CDS BPSL0934 NC_006350.1 1085948 1086844 D Similar to Streptomyces antibioticus hydrolase SWALL:Q93F92 (EMBL:AF322256) (302 aa) fasta scores: E(): 1.3e-12, 29.56% id in 274 aa, and to Pseudomonas aeruginosa probable epoxide hydrolase pa3994 SWALL:Q9HX27 (EMBL:AE004817) (296 aa) fasta scores: E(): 8.8e-91, 71.18% id in 295 aa; hydrolase 1085948..1086844 Burkholderia pseudomallei K96243 3092900 YP_107563.1 CDS BPSL0935 NC_006350.1 1087055 1087744 R Similar to Ralstonia solanacearum hypothetical protein rsc1157 or rs04594 SWALL:Q8Y087 (EMBL:AL646063) (241 aa) fasta scores: E(): 7.8e-50, 56.08% id in 230 aa, and to Xanthomonas axonopodis hypothetical protein xac1859 SWALL:AAM36721 (EMBL:AE011819) (237 aa) fasta scores: E(): 3.3e-46, 52.21% id in 226 aa; hypothetical protein complement(1087055..1087744) Burkholderia pseudomallei K96243 3092785 YP_107564.1 CDS BPSL0936 NC_006350.1 1087759 1088655 R Similar to Methanopyrus kandleri dihydrodipicolinate synthase DapA or mk1607 SWALL:Q8TUZ4 (EMBL:AE010450) (300 aa) fasta scores: E(): 1.7e-25, 31.48% id in 289 aa, and to Pseudomonas aeruginosa probable dihydrodipicolinate synthetase pa0223 SWALL:Q9I6R5 (EMBL:AE004460) (293 aa) fasta scores: E(): 4e-68, 61.43% id in 293 aa, and to Vibrio sp. CH-291 hypothetical protein SWALL:Q93IK7 (EMBL:AJ314791) (295 aa) fasta scores: E(): 9.2e-63, 57.58% id in 290 aa; dihydrodipicolinate synthetase complement(1087759..1088655) Burkholderia pseudomallei K96243 3092786 YP_107565.1 CDS BPSL0937 NC_006350.1 1088737 1089519 R Similar to Pseudomonas aeruginosa probable aldolase pa0224 SWALL:Q9I6R4 (EMBL:AE004460) (260 aa) fasta scores: E(): 1e-76, 69.49% id in 259 aa, and to Vibrio sp. CH-291 hypothetical protein SWALL:Q93IK8 (EMBL:AJ314791) (259 aa) fasta scores: E(): 2e-71, 65.63% id in 259 aa, and to Streptomyces sphaeroides NovR SWALL:Q9L9F0 (EMBL:AF170880) (270 aa) fasta scores: E(): 2.1e-15, 33.62% id in 232 aa; class II aldolase/adducin domain-containing protein complement(1088737..1089519) Burkholderia pseudomallei K96243 3092851 YP_107566.1 CDS BPSL0938 NC_006350.1 1089651 1090214 D Similar to Ralstonia solanacearum transcription regulator protein rsc1159 or rs04592 SWALL:Q8Y085 (EMBL:AL646063) (182 aa) fasta scores: E(): 3e-34, 62.35% id in 170 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0225 SWALL:Q9I6R3 (EMBL:AE004460) (179 aa) fasta scores: E(): 3e-31, 55.17% id in 174 aa; DNA-binding protein 1089651..1090214 Burkholderia pseudomallei K96243 3092852 YP_107567.1 CDS BPSL0938A NC_006350.1 1090254 1090730 D Doubtful CDS. No significant database matches; hypothetical protein 1090254..1090730 Burkholderia pseudomallei K96243 3094597 YP_107568.1 CDS BPSL0939 NC_006350.1 1091418 1092440 D Similar to Xanthomonas axonopodis hypothetical protein xac0625 SWALL:AAM35514 (EMBL:AE011690) (321 aa) fasta scores: E(): 1.4e-42, 39.62% id in 323 aa, and to Xanthomonas campestris hypothetical protein xcc3509 SWALL:AAM42779 (EMBL:AE012470) (321 aa) fasta scores: E(): 2.9e-42, 39.62% id in 323 aa; DeoR family regulatory protein 1091418..1092440 Burkholderia pseudomallei K96243 3094598 YP_107569.1 CDS BPSL0940 NC_006350.1 1092813 1092992 D Similar to Methanosarcina mazei conserved protein mm3163 SWALL:AAM32859 (EMBL:AE013574) (53 aa) fasta scores: E(): 2.3e-06, 51.78% id in 56 aa; hypothetical protein 1092813..1092992 Burkholderia pseudomallei K96243 3091733 YP_107570.1 CDS BPSL0941 NC_006350.1 1093213 1097322 D hypothetical protein 1093213..1097322 Burkholderia pseudomallei K96243 3091734 YP_107571.1 CDS BPSL0942 NC_006350.1 1097348 1099549 D hypothetical protein 1097348..1099549 Burkholderia pseudomallei K96243 3092810 YP_107572.1 CDS BPSL0943 NC_006350.1 1099585 1100412 R Similar to the C-terminal region of Xanthomonas campestris insertion element IS476 hypothetical 39.2 kDa protein SWALL:YI61_XANCV (SWALL:P25438) (346 aa) fasta scores: E(): 1.9e-46, 46.59% id in 264 aa, and to the full length Ralstonia solanacearum ISRso14-transposase OrfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 5.6e-57, 53.96% id in 252 aa; insertion element protein complement(1099585..1100412) Burkholderia pseudomallei K96243 3092811 YP_107573.1 CDS BPSL0944 NC_006350.1 1100898 1102121 D Similar to Rhizobium loti probable integrase mlr0958 SWALL:Q98LN1 (EMBL:AP002996) (417 aa) fasta scores: E(): 2.4e-12, 27.34% id in 267 aa, and to Caulobacter crescentus integrase/recombinase, phage integrase cc2681 SWALL:Q9A4Z1 (EMBL:AE005935) (432 aa) fasta scores: E(): 5.4e-10, 25.92% id in 270 aa; phage integrase/recombinase 1100898..1102121 Burkholderia pseudomallei K96243 3094058 YP_107574.1 CDS BPSL0945 NC_006350.1 1102333 1105446 R Internal region is similar to an internal region of Escherichia coli type I restriction enzyme EcoR124II R protein HsdR or Hsr SWALL:T1R1_ECOLI (SWALL:P10486) (1033 aa) fasta scores: E(): 0.00016, 22.65% id in 693 aa. Full length CDS is similar to Xanthomonas axonopodis type I restriction-modification system endonuclease xac2898 SWALL:AAM37743 (EMBL:AE011932) (1084 aa) fasta scores: E(): 2e-86, 41.17% id in 1059 aa; hypothetical protein complement(1102333..1105446) Burkholderia pseudomallei K96243 3094059 YP_107575.1 CDS BPSL0946 NC_006350.1 1105502 1106434 R Similar to Brucella melitensis transporter bmeii0447 SWALL:Q8YCT1 (EMBL:AE009681) (309 aa) fasta scores: E(): 8.9e-63, 54.04% id in 309 aa, and to Streptomyces coelicolor hypothetical protein sco3509 or sce134.10 SWALL:Q9X865 (EMBL:AL049661) (320 aa) fasta scores: E(): 5.2e-43, 42.44% id in 311 aa; hypothetical protein complement(1105502..1106434) Burkholderia pseudomallei K96243 3093178 YP_107576.1 CDS BPSL0947 NC_006350.1 1106431 1107720 R N-terminus is similar to the C-terminal region of Escherichia coli type I restriction enzyme EcoEI specificity protein HsdS or Hss SWALL:T1SE_ECOLI (SWALL:P19705) (594 aa) fasta scores: E(): 6.4e-07, 27.55% id in 196 aa. Full length CDS is similar to Methanosarcina mazei type I restriction-modification system specificity subunit mm2703 SWALL:AAM32399 (EMBL:AE013517) (440 aa) fasta scores: E(): 5.9e-20, 37.64% id in 178 aa; type I restriction enzyme specificity protein complement(1106431..1107720) Burkholderia pseudomallei K96243 3093179 YP_107577.1 CDS BPSL0948 NC_006350.1 1107717 1109558 R N-terminus is similar to the N-terminal region of Escherichia coli type I restriction enzyme ecoprrI M protein HsdM SWALL:T1MP_ECOLI (SWALL:Q47163) (520 aa) fasta scores: E(): 6.5e-09, 26.65% id in 469 aa. Full length CDS is similar to Caulobacter crescentus type I restriction-modification system, M subunit, cc0620 SWALL:Q9AAH8 (EMBL:AE005738) (611 aa) fasta scores: E(): 6.7e-183, 75.36% id in 613 aa; type I restriction-modification methylase complement(1107717..1109558) Burkholderia pseudomallei K96243 3093463 YP_107578.1 CDS BPSL0949 NC_006350.1 1109892 1110272 R Possible gene remnant. Weakly similar to the C-terminal region of Corynebacterium glutamicum integrase cgl1419 SWALL:BAB98812 (EMBL:AP005278) (304 aa) fasta scores: E(): 0.42, 28.71% id in 101 aa; hypothetical protein complement(1109892..1110272) Burkholderia pseudomallei K96243 3093464 YP_107579.1 CDS BPSL0950 NC_006350.1 1110368 1110631 D Identical to Burkholderia cepacia insertion element IS407 hypothetical 10.0 kDa protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa. Similar to Ralstonia solanacearum ISRso14-transposase orfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa; hypothetical protein 1110368..1110631 Burkholderia pseudomallei K96243 3092958 YP_107580.1 CDS BPSL0952 NC_006350.1 1110880 1111743 R Similar to Bacteroides nodosus plasmid replication protein C RepC SWALL:Q9ETY6 (EMBL:Y19120) (283 aa) fasta scores: E(): 3e-31, 38.76% id in 276 aa, and to Salmonella typhi plasmid replication protein HCM1.221 SWALL:Q935I4 (EMBL:AL513383) (283 aa) fasta scores: E(): 1.4e-30, 38.62% id in 277 aa; replication protein complement(1110880..1111743) Burkholderia pseudomallei K96243 3094019 YP_107581.1 CDS BPSL0953 NC_006350.1 1111772 1111933 R Similar to an internal region of Bbcteriophage P4 hypothetical protein SWALL:Y9K_BPP4 (SWALL:P12552) (88 aa) fasta scores: E(): 0.0049, 47.36% id in 38 aa; hypothetical protein complement(1111772..1111933) Burkholderia pseudomallei K96243 3094020 YP_107582.1 CDS BPSL0954 NC_006350.1 1112425 1112763 R Doubtful CDS. No significant database matches; hypothetical protein complement(1112425..1112763) Burkholderia pseudomallei K96243 3093151 YP_107583.1 CDS BPSL0955 NC_006350.1 1112760 1113701 R Similar to Escherichia coli, and Escherichia coli O157:H7 cys regulon transcriptional activator CysB or b1275 or z2535 or ecs1847 SWALL:CYSB_ECOLI (SWALL:P06613) (324 aa) fasta scores: E(): 1.8e-49, 44.73% id in 304 aa, and to Ralstonia solanacearum cys regulon transcriptional activator-related transcription regulator protein CysB2 or rsc2427 or rs02682 SWALL:Q8XWP6 (EMBL:AL646070) (313 aa) fasta scores: E(): 5.8e-88, 73.48% id in 313 aa, and to Neisseria meningitidis cys regulon transcriptional activator nmb0381 SWALL:Q9K116 (EMBL:AE002394) (316 aa) fasta scores: E(): 3.9e-58, 51.3% id in 306 aa; transcriptional regulator CysB-like protein complement(1112760..1113701) Burkholderia pseudomallei K96243 3093152 YP_107584.1 CDS cysI NC_006350.1 1113921 1115600 D Similar to Pseudomonas aeruginosa sulfite reductase CysI SWALL:O31037 (EMBL:AF026066) (552 aa) fasta scores: E(): 9.2e-145, 64.91% id in 553 aa, and to Ralstonia solanacearum probable sulfite reductase oxidoreductase CysI1 or rsc2425 or rs02684 SWALL:Q8XWP8 (EMBL:AL646070) (553 aa) fasta scores: E(): 3.4e-169, 73.65% id in 558 aa, and to Pseudomonas aeruginosa sulfite reductase CysI or pa1838 SWALL:Q9I2Q7 (EMBL:AE004609) (552 aa) fasta scores: E(): 9.9e-152, 67.26% id in 553 aa; sulfite reductase 1113921..1115600 Burkholderia pseudomallei K96243 3092756 YP_107585.1 CDS BPSL0957 NC_006350.1 1115625 1116167 D Similar to Ralstonia solanacearum hypothetical protein rsc2424 or rs02687 SWALL:Q8XWP9 (EMBL:AL646070) (194 aa) fasta scores: E(): 1.3e-33, 57.39% id in 169 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1837 pa1837 SWALL:Q9I2Q8 (EMBL:AE004609) (165 aa) fasta scores: E(): 9.1e-32, 55.23% id in 172 aa; hypothetical protein 1115625..1116167 Burkholderia pseudomallei K96243 3093319 YP_107586.1 CDS cysH NC_006350.1 1116164 1116913 D catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 1116164..1116913 Burkholderia pseudomallei K96243 3093471 YP_107587.1 CDS cysD NC_006350.1 1116994 1117959 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1116994..1117959 Burkholderia pseudomallei K96243 3094480 YP_107588.1 CDS cysN NC_006350.1 1117982 1119298 D Similar to Escherichia coli sulfate adenylyltransferase subunit 1 CysN or b2751 SWALL:CYSN_ECOLI (SWALL:P23845) (475 aa) fasta scores: E(): 3.4e-47, 49.06% id in 426 aa, and to Ralstonia solanacearum probable sulfate adenylyltransferase subunit 1 protein rsc2421 or rs02692 SWALL:Q8XWQ2 (EMBL:AL646070) (435 aa) fasta scores: E(): 2.3e-111, 71.69% id in 431 aa; sulfate adenylyltransferase subunit 1 1117982..1119298 Burkholderia pseudomallei K96243 3093094 YP_107589.1 CDS BPSL0961 NC_006350.1 1119295 1120131 D catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 1119295..1120131 Burkholderia pseudomallei K96243 3093320 YP_107590.1 CDS BPSL0962 NC_006350.1 1120341 1120727 R Similar to Ralstonia solanacearum hypothetical protein rsc2418 or rs02695 SWALL:Q8XWQ5 (EMBL:AL646070) (123 aa) fasta scores: E(): 8.2e-27, 64.46% id in 121 aa; hypothetical protein complement(1120341..1120727) Burkholderia pseudomallei K96243 3093988 YP_107591.1 CDS BPSL0963 NC_006350.1 1120759 1121910 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2417 or rs02697 SWALL:Q8XWQ6 (EMBL:AL646070) (401 aa) fasta scores: E(): 3.2e-38, 58.83% id in 396 aa, and to Neisseria meningitidis hypothetical protein nmb1571 SWALL:Q9JYI5 (EMBL:AE002507) (356 aa) fasta scores: E(): 1.1e-14, 33.5% id in 382 aa, and to Escherichia coli hypothetical protein b4262 SWALL:YJGQ_ECOLI (SWALL:P39341) (360 aa) fasta scores: E(): 2.9e-09, 27.96% id in 379 aa; permease complement(1120759..1121910) Burkholderia pseudomallei K96243 3093989 YP_107592.1 CDS BPSL0964 NC_006350.1 1121914 1123011 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2416 or rs02698 SWALL:Q8XWQ7 (EMBL:AL646070) (372 aa) fasta scores: E(): 3.6e-68, 50.71% id in 349 aa, and to Neisseria meningitidis hypothetical protein nmb1570 SWALL:Q9JYI6 (EMBL:AE002507) (371 aa) fasta scores: E(): 1.6e-40, 34.27% id in 356 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YjgP or b4261 or z5873 or ecs5238 SWALL:YJGP_ECOLI (SWALL:P39340) (366 aa) fasta scores: E(): 1.8e-26, 29.15% id in 367 aa; permease complement(1121914..1123011) Burkholderia pseudomallei K96243 3091715 YP_107593.1 CDS pepA NC_006350.1 1123132 1124643 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1123132..1124643 Burkholderia pseudomallei K96243 3092640 YP_107594.1 CDS BPSL0966 NC_006350.1 1124687 1125103 D binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 1124687..1125103 Burkholderia pseudomallei K96243 3091716 YP_107595.1 CDS BPSL0967 NC_006350.1 1125125 1125835 D hypothetical protein 1125125..1125835 Burkholderia pseudomallei K96243 3091713 YP_107596.1 CDS BPSL0968 NC_006350.1 1125993 1126316 R Similar to Nitrosomonas europaea cytochrome c-552 precursor Cyt SWALL:C552_NITEU (SWALL:P95339) (103 aa) fasta scores: E(): 5e-12, 44.86% id in 107 aa, and to Ralstonia solanacearum probable cytochrome c transmembrane protein rsc3260 or rs02489 SWALL:Q8XUD1 (EMBL:AL646074) (141 aa) fasta scores: E(): 8.7e-12, 35.83% id in 120 aa. Possible alternative translational start site; cytochrome c protein complement(1125993..1126316) Burkholderia pseudomallei K96243 3091714 YP_107597.1 CDS ilvD NC_006350.1 1126530 1128203 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(1126530..1128203) Burkholderia pseudomallei K96243 3093888 YP_107598.1 CDS ilvR NC_006350.1 1128381 1129376 D Similar to Caulobacter crescentus isoleucine biosynthesis transcriptional activator IlvR or cc3045 SWALL:ILVR_CAUCR (SWALL:P52670) (296 aa) fasta scores: E(): 4.4e-49, 53.52% id in 312 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2411 or rs02707 SWALL:Q8XWR2 (EMBL:AL646070) (311 aa) fasta scores: E(): 2.7e-57, 61.93% id in 310 aa, and to Bacillus subtilis als operon regulatory protein AlsR SWALL:ALSR_BACSU (SWALL:Q04778) (302 aa) fasta scores: E(): 2.1e-30, 38.18% id in 309 aa; isoleucine biosynthesis transcriptional activator 1128381..1129376 Burkholderia pseudomallei K96243 3092725 YP_107599.1 CDS lgt NC_006350.1 1129483 1130373 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1129483..1130373 Burkholderia pseudomallei K96243 3094086 YP_107600.1 CDS BPSL0972 NC_006350.1 1130741 1131478 R Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2404 or rs02714 SWALL:Q8XWR6 (EMBL:AL646070) (221 aa) fasta scores: E(): 4.5e-24, 53.37% id in 163 aa, and to Pseudomonas aeruginosa hypothetical protein pa4495 SWALL:Q9HVS6 (EMBL:AE004863) (236 aa) fasta scores: E(): 2.3e-19, 36.29% id in 248 aa; Downstream repeat region(cggagca)4 and (cggacacggaca)3; hypothetical protein complement(1130741..1131478) Burkholderia pseudomallei K96243 3093686 YP_107601.1 CDS BPSL0973 NC_006350.1 1131677 1132138 R Similar to Ralstonia solanacearum hypothetical protein rsc2403 or rs02715 SWALL:Q8XWR7 (EMBL:AL646070) (168 aa) fasta scores: E(): 2.2e-43, 72.84% id in 151 aa, and to Xanthomonas campestris hypothetical protein xcc3264 SWALL:Q8P5S2 (EMBL:AE012443) (147 aa) fasta scores: E(): 2.9e-30, 59.31% id in 145 aa. Possible alternative translational start site; hypothetical protein complement(1131677..1132138) Burkholderia pseudomallei K96243 3093687 YP_107602.1 CDS BPSL0974 NC_006350.1 1132478 1132792 R Similar to Ralstonia solanacearum hypothetical protein rsc2402 or rs02716 SWALL:Q8XWR8 (EMBL:AL646070) (105 aa) fasta scores: E(): 1.1e-11, 44.55% id in 101 aa, and to Pasteurella multocida hypothetical protein pm1722 SWALL:Q9CKA3 (EMBL:AE006208) (100 aa) fasta scores: E(): 8.4e-06, 32% id in 100 aa; hypothetical protein complement(1132478..1132792) Burkholderia pseudomallei K96243 3092528 YP_107603.1 CDS BPSL0975 NC_006350.1 1132789 1133139 R Similar to Ralstonia solanacearum hypothetical protein rsc2401 or rs02717 SWALL:Q8XWR9 (EMBL:AL646070) (106 aa) fasta scores: E(): 2.9e-06, 45.21% id in 115 aa; Upstream repeat region (cgc)4; hypothetical protein complement(1132789..1133139) Burkholderia pseudomallei K96243 3092529 YP_107604.1 CDS BPSL0976 NC_006350.1 1133678 1135735 D Similar to Ralstonia solanacearum probable outer membrane receptor protein rsc2400 or rs02718 SWALL:Q8XWS0 (EMBL:AL646070) (621 aa) fasta scores: E(): 5.2e-91, 49.1% id in 615 aa, and to Salmonella typhimurium vitamin B12 receptor precursor BtuB or stm4130 SWALL:BTUB_SALTY (SWALL:P37409) (614 aa) fasta scores: E(): 2.7e-32, 28.52% id in 603 aa. CDS is extended at the N-terminus in comparison to orthologues; outer membrane receptor protein 1133678..1135735 Burkholderia pseudomallei K96243 3093408 YP_107605.1 CDS BPSL0977 NC_006350.1 1135814 1136815 D Similar to Pseudomonas aeruginosa ABC-type permease PhuU SWALL:O68878 (EMBL:AF055999) (326 aa) fasta scores: E(): 5.1e-33, 45.06% id in 324 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc2399 or rs02719 SWALL:Q8XWS1 (EMBL:AL646070) (335 aa) fasta scores: E(): 1.4e-60, 58.51% id in 323 aa; transmembrane ABC transporter permease 1135814..1136815 Burkholderia pseudomallei K96243 3093409 YP_107606.1 CDS BPSL0978 NC_006350.1 1136812 1137642 D Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2398 or rs02720 SWALL:Q8XWS2 (EMBL:AL646070) (279 aa) fasta scores: E(): 3.4e-40, 52.45% id in 265 aa, and to Yersinia enterocolitica ferric enterochelin transport ATP-binding protein FepC SWALL:Q9X3S3 (EMBL:AF082879) (272 aa) fasta scores: E(): 2.4e-20, 35.71% id in 266 aa; ATP-binding ABC transporter protein 1136812..1137642 Burkholderia pseudomallei K96243 3094575 YP_107607.1 CDS cobT NC_006350.1 1137686 1138744 D catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1137686..1138744 Burkholderia pseudomallei K96243 3094576 YP_107608.1 CDS cobS NC_006350.1 1138751 1139509 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 1138751..1139509 Burkholderia pseudomallei K96243 3092916 YP_107609.1 CDS BPSL0981 NC_006350.1 1139494 1140093 D Similar to Ralstonia solanacearum hypothetical protein rsc2395 or rs02727 SWALL:Q8XWS5 (EMBL:AL646069) (192 aa) fasta scores: E(): 1.3e-22, 43.09% id in 181 aa, and to Rhodobacter capsulatus BluF protein SWALL:O68088 (EMBL:AF010496) (195 aa) fasta scores: E(): 2.5e-06, 38.33% id in 180 aa, and to Escherichia coli alpha-ribazole-5'-phosphate phosphatase CobC or PhpB or b0638 SWALL:COBC_ECOLI (SWALL:P52086) (203 aa) fasta scores: E(): 7.1e-05, 29.94% id in 187 aa; phosphoglycerate mutase 1139494..1140093 Burkholderia pseudomallei K96243 3092917 YP_107610.1 CDS BPSL0982 NC_006350.1 1140236 1141072 R hypothetical protein complement(1140236..1141072) Burkholderia pseudomallei K96243 3092134 YP_107611.1 CDS btuF NC_006350.1 1141238 1142170 R Similar to Salmonella typhimurium vitamin B12 transport protein BtuF or stm0206 SWALL:BTUF_SALTY (SWALL:Q8ZRP7) (266 aa) fasta scores: E(): 1.3e-20, 38.03% id in 255 aa, and to Ralstonia solanacearum probable substrate-binding periplasmic rsc2394 or rs02728 SWALL:Q8XWS6 (EMBL:AL646069) (313 aa) fasta scores: E(): 6.9e-67, 59.54% id in 309 aa, and to Escherichia coli vitamin B12 transport protein BtuF or b0158 SWALL:BTUF_ECOLI (SWALL:P37028) (266 aa) fasta scores: E(): 2.8e-22, 38.03% id in 255 aa; vitamin B12 transport protein complement(1141238..1142170) Burkholderia pseudomallei K96243 3091770 YP_107612.1 CDS cobC NC_006350.1 1142176 1143228 R cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase complement(1142176..1143228) Burkholderia pseudomallei K96243 3093515 YP_107613.1 CDS cobD NC_006350.1 1143221 1144165 R CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein complement(1143221..1144165) Burkholderia pseudomallei K96243 3092135 YP_107614.1 CDS BPSL0986 NC_006350.1 1144159 1144716 R Similar to Pseudomonas denitrificans bifunctional cobalamin biosynthesis protein [includes: cobinamide kinase; cobinamide phosphate guanylyltransferase] CobP SWALL:COBP_PSEDE (SWALL:P29931) (173 aa) fasta scores: E(): 1.1e-25, 46.78% id in 171 aa, and to Ralstonia solanacearum probable cobalamin biosynthesis bifunctional protein: cobinamide kinase and cobinamide phosphate guanylyltransferase CobP or rsc2391 or rs02758 SWALL:Q8XWS9 (EMBL:AL646069) (193 aa) fasta scores: E(): 1.8e-31, 55.49% id in 191 aa, and to Escherichia coli, and Escherichia coli O157:H7 bifunctional cobalamin biosynthesis protein [includes: cobinamide kinase; cobinamide phosphate guanylyltransferase] b1993 or z3153 or ecs2788 SWALL:COBU_ECOLI (SWALL:P46886) (181 aa) fasta scores: E(): 1.8e-19, 41.98% id in 181 aa; Upstream repeat region (gccaacgccaac)4; bifunctional cobalamin biosynthesis protein complement(1144159..1144716) Burkholderia pseudomallei K96243 3091756 YP_107615.1 CDS cobQ NC_006350.1 1144873 1146333 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1144873..1146333 Burkholderia pseudomallei K96243 3093489 YP_107616.1 CDS BPSL0988 NC_006350.1 1146614 1147030 D Similar to Xanthomonas axonopodis hypothetical protein xac3707 SWALL:Q8PGB0 (EMBL:AE012020) (136 aa) fasta scores: E(): 3.2e-20, 55.28% id in 123 aa; hypothetical protein 1146614..1147030 Burkholderia pseudomallei K96243 3091757 YP_107617.1 CDS BPSL0989 NC_006350.1 1147399 1148022 D Similar to Pseudomonas alcaligenes plasmid pRA2 ParA homolog SWALL:Q9XAW8 (EMBL:U88088) (212 aa) fasta scores: E(): 3.8e-09, 32.1% id in 190 aa, and to Ralstonia solanacearum partition-related protein rsc2389 or rs02760 SWALL:Q8XWT1 (EMBL:AL646069) (217 aa) fasta scores: E(): 2e-48, 65.68% id in 204 aa, and to Xanthomonas campestris partition protein xcc0174 SWALL:AAM39493 (EMBL:AE012113) (210 aa) fasta scores: E(): 9.4e-17, 32.86% id in 213 aa; ParA family ATPase 1147399..1148022 Burkholderia pseudomallei K96243 3094388 YP_107618.1 CDS panD NC_006350.1 1148137 1148523 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(1148137..1148523) Burkholderia pseudomallei K96243 3093259 YP_107619.1 CDS panC NC_006350.1 1148576 1149415 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(1148576..1149415) Burkholderia pseudomallei K96243 3093228 YP_107620.1 CDS BPSL0992 NC_006350.1 1150167 1151042 R Similar to Ralstonia solanacearum hypothetical protein rsc2386 or rs02764 SWALL:Q8XWT4 (EMBL:AL646069) (293 aa) fasta scores: E(): 5.2e-85, 81.52% id in 276 aa, and to Neisseria meningitidis hypothetical protein nmb1504 SWALL:Q9JYN0 (EMBL:AE002500) (284 aa) fasta scores: E(): 3.6e-49, 54.44% id in 270 aa. CDS is extended at the N-terminus in comparison to some orthologues; hypothetical protein complement(1150167..1151042) Burkholderia pseudomallei K96243 3094389 YP_107621.1 CDS BPSL0993 NC_006350.1 1151047 1151235 R Similar to Ralstonia solanacearum hypothetical protein rsc2385 or rs02765 SWALL:Q8XWT5 (EMBL:AL646069) (62 aa) fasta scores: E(): 3.3e-11, 64.28% id in 56 aa, and to Neisseria meningitidis hypothetical protein nma1654 SWALL:Q9JTS3 (EMBL:AL162756) (61 aa) fasta scores: E(): 3.1e-06, 45.76% id in 59 aa; hypothetical protein complement(1151047..1151235) Burkholderia pseudomallei K96243 3094637 YP_107622.1 CDS BPSL0994 NC_006350.1 1151442 1153259 D C-terminal region is similar to Ralstonia solanacearum lipoprotein rsc2384 or rs02766 SWALL:Q8XWT6 (EMBL:AL646069) (589 aa) fasta scores: E(): 7.4e-108, 48.16% id in 571 aa, and to the C-terminal region of Neisseria meningitidis outer membrane protein nma0296 SWALL:Q9JWM5 (EMBL:AL162752) (615 aa) fasta scores: E(): 3.7e-43, 28.26% id in 566 aa; hypothetical protein 1151442..1153259 Burkholderia pseudomallei K96243 3094638 YP_107623.1 CDS BPSL0995 NC_006350.1 1153273 1157391 D Similar to Ralstonia solanacearum signal peptide protein rsc2383 or rs06185 SWALL:Q8XWT7 (EMBL:AL646069) (1299 aa) fasta scores: E(): 3.6e-120, 42.81% id in 1371 aa, and to Neisseria meningitidis hypothetical protein nmb2135 SWALL:Q9JXB6 (EMBL:AE002561) (1405 aa) fasta scores: E(): 8.4e-29, 26.91% id in 1475 aa; hypothetical protein 1153273..1157391 Burkholderia pseudomallei K96243 3092184 YP_107624.1 CDS BPSL0996 NC_006350.1 1157739 1158449 D Similar to Anabaena sp. hypothetical protein all0326 SWALL:Q8YZX8 (EMBL:AP003582) (224 aa) fasta scores: E(): 1.4e-07, 26.14% id in 218 aa; hypothetical protein 1157739..1158449 Burkholderia pseudomallei K96243 3092185 YP_107625.1 CDS BPSL0997 NC_006350.1 1158446 1159459 D Similar to Streptomyces argillaceus O-methyltransferase MtmMI SWALL:Q9R6R8 (EMBL:AF077869) (345 aa) fasta scores: E(): 1.6e-15, 29.54% id in 308 aa, and to Streptomyces sp. JP95 methyltransferase GrhL SWALL:AAM33664 (EMBL:AF509565) (343 aa) fasta scores: E(): 1.8e-20, 30.35% id in 313 aa, and to Bos taurus hydroxyindole O-methyltransferase ASMT SWALL:HIOM_BOVIN (SWALL:P10950) (345 aa) fasta scores: E(): 1.3e-19, 30.44% id in 335 aa; methyltransferase 1158446..1159459 Burkholderia pseudomallei K96243 3093682 YP_107626.1 CDS metG NC_006350.1 1159815 1161992 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1159815..1161992) Burkholderia pseudomallei K96243 3091950 YP_107627.1 CDS BPSL0999 NC_006350.1 1162474 1163121 R Similar to Pseudomonas syringae outer membrane porin F precursor OprF SWALL:PORF_PSESY (SWALL:P22263) (344 aa) fasta scores: E(): 1.4e-08, 36.57% id in 175 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2380 or rs01165 SWALL:Q8XWU0 (EMBL:AL646069) (209 aa) fasta scores: E(): 2.2e-33, 57.69% id in 208 aa; OmpA family transmembrane protein complement(1162474..1163121) Burkholderia pseudomallei K96243 3093683 YP_107628.1 CDS BPSL1000 NC_006350.1 1163502 1164590 D Similar to Escherichia coli Mrp protein or b2113 SWALL:MRP_ECOLI (SWALL:P21590) (369 aa) fasta scores: E(): 1.5e-62, 54% id in 337 aa, and to Ralstonia solanacearum probable ATP-binding protein Mrp or rsc2379 or rs01166 SWALL:Q8XWU1 (EMBL:AL646069) (362 aa) fasta scores: E(): 2e-93, 72.65% id in 362 aa; ATP-binding protein 1163502..1164590 Burkholderia pseudomallei K96243 3093990 YP_107629.1 CDS BPSL1001 NC_006350.1 1164723 1165262 D Similar although longer in its N-terminal region than Xanthomonas campestris pv. campestris str. ATCC33913 superoxide dismutase SodC2 SWALL:AAM39510 (EMBL:AE012115) (165 aa) fasta scores: E(): 7.1e-15, 43.44% id in 145 aa, and to Ovis aries superoxide dismutase [Cu-Zn] Sod1 SWALL:SODC_SHEEP (SWALL:P09670) (151 aa) fasta scores: E(): 1.4e-08, 37.03% id in 135 aa; membrane-attached superoxide dismutase 1164723..1165262 Burkholderia pseudomallei K96243 3093991 YP_107630.1 CDS dcd NC_006350.1 1165366 1165935 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1165366..1165935 Burkholderia pseudomallei K96243 3094702 YP_107631.1 CDS BPSL1003 NC_006350.1 1166038 1168317 D Similar to, although longer in its N-terminal region than, Escherichia coli ornithine decarboxylase, inducible SpeF or b0693 SWALL:DCOS_ECOLI (SWALL:P24169) (732 aa) fasta scores: E(): 4.5e-73, 32.64% id in 680 aa, and to Ralstonia solanacearum probable biodegradative arginine decarboxylase rsc2365 or rs01181 SWALL:Q8XWV5 (EMBL:AL646069) (759 aa) fasta scores: E(): 1.1e-198, 79.68% id in 768 aa; ornithine decarboxylase 1166038..1168317 Burkholderia pseudomallei K96243 3093996 YP_107632.1 CDS BPSL1004 NC_006350.1 1168320 1169042 D hypothetical protein 1168320..1169042 Burkholderia pseudomallei K96243 3093997 YP_107633.1 CDS BPSL1005 NC_006350.1 1169176 1169850 R Similar to Vibrio cholerae CbbY family protein vca0102 SWALL:Q9KN63 (EMBL:AE004353) (219 aa) fasta scores: E(): 2.9e-21, 39.81% id in 211 aa, and to Escherichia coli protein YfbT or b2293 SWALL:YFBT_ECOLI (SWALL:P77625) (216 aa) fasta scores: E(): 5.4e-11, 34.29% id in 207 aa; hydrolase complement(1169176..1169850) Burkholderia pseudomallei K96243 3091590 YP_107634.1 CDS argH NC_006350.1 1169883 1171292 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(1169883..1171292) Burkholderia pseudomallei K96243 3092554 YP_107635.1 CDS BPSL1007 NC_006350.1 1171461 1173761 R Similar, although shorter in its N-terminal region, to Escherichia coli outer membrane usher protein precursor FanD SWALL:FAND_ECOLI (SWALL:P12050) (783 aa) fasta scores: E(): 7.7e-14, 23.63% id in 732 aa, and to Ralstonia solanacearum probable signal peptide protein rsp1498 or rs03043 SWALL:Q8XPY8 (EMBL:AL646085) (786 aa) fasta scores: E(): 2.6e-122, 46.55% id in 769 aa. Possible gene remnant; fimbriae usher protein complement(1171461..1173761) Burkholderia pseudomallei K96243 3091591 YP_107636.1 CDS BPSL1008 NC_006350.1 1174516 1175226 R Similar to, although shorted in its N-terminal region than, Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 0.00033, 30.58% id in 206 aa, and to Ralstonia solanacearum pili assembly chaperone transmembrane protein rsp1499 or rs03042 SWALL:Q8XPY7 (EMBL:AL646085) (241 aa) fasta scores: E(): 7.3e-28, 44% id in 225 aa; exported fimbriae-related chaperone complement(1174516..1175226) Burkholderia pseudomallei K96243 3091868 YP_107637.1 CDS BPSL1009 NC_006350.1 1175234 1175752 R Similar to Ralstonia solanacearum probable signal peptide protein rsp1500 or rs03041 SWALL:Q8XPY6 (EMBL:AL646085) (173 aa) fasta scores: E(): 1e-30, 62.65% id in 166 aa, and to Agrobacterium tumefaciens hypothetical protein atu4733 or agr_l_295 SWALL:Q8U6S3 (EMBL:AE009401) (177 aa) fasta scores: E(): 1.4e-20, 43.01% id in 186 aa; hypothetical protein complement(1175234..1175752) Burkholderia pseudomallei K96243 3091869 YP_107638.1 CDS BPSL1010 NC_006350.1 1176147 1177136 D Similar to Agrobacterium tumefaciens hypothetical protein atu4730 or agr_l_303 SWALL:Q8U6S6 (EMBL:AE009401) (316 aa) fasta scores: E(): 8e-32, 39.75% id in 327 aa, and to Xanthomonas axonopodis pv. citri str. 306 conserved hypothetical protein xac1424 SWALL:AAM36295 (EMBL:AE011774) (342 aa) fasta scores: E(): 1.1e-16, 35.04% id in 351 aa; lipoprotein 1176147..1177136 Burkholderia pseudomallei K96243 3092911 YP_107639.1 CDS BPSL1011 NC_006350.1 1177309 1178124 R Similar to Rhizobium loti hypothetical protein mll1636 SWALL:Q98K51 (EMBL:AP002997) (290 aa) fasta scores: E(): 1.1e-36, 43.13% id in 262 aa, and to Rhizobium loti probable DNA-binding protein mlr2155 SWALL:Q98J14 (EMBL:AP002999) (276 aa) fasta scores: E(): 2.6e-27, 39.92% id in 253 aa; DNA-binding protein complement(1177309..1178124) Burkholderia pseudomallei K96243 3092912 YP_107640.1 CDS BPSL1012 NC_006350.1 1178289 1179062 D Similar to Serratia marcescens biotin synthesis protein BioC SWALL:BIOC_SERMA (SWALL:P36571) (255 aa) fasta scores: E(): 2.9e-07, 34.13% id in 167 aa, and to Salmonella typhimurium methyltransferase in menaquinone/biotin biosynthesis YafE or stm0259 SWALL:Q8ZRM3 (EMBL:AE008706) (256 aa) fasta scores: E(): 7.8e-44, 52.77% id in 252 aa; biotin biosyntehsis-like protein 1178289..1179062 Burkholderia pseudomallei K96243 3091472 YP_107641.1 CDS BPSL1013 NC_006350.1 1179480 1182464 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(1179480..1182464) Burkholderia pseudomallei K96243 3091473 YP_107642.1 CDS BPSL1014 NC_006350.1 1182577 1182756 D Doubtful CDS. No significant database matches; hypothetical protein 1182577..1182756 Burkholderia pseudomallei K96243 3093060 YP_107643.1 CDS hemC NC_006350.1 1182791 1183780 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1182791..1183780 Burkholderia pseudomallei K96243 3092988 YP_107644.1 CDS BPSL1016 NC_006350.1 1183777 1185759 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase 1183777..1185759 Burkholderia pseudomallei K96243 3093061 YP_107645.1 CDS BPSL1017 NC_006350.1 1185764 1186954 D Similar to Escherichia coli, and Escherichia coli O157:H7 HemY protein or b3802 or z5316 or ecs4732 SWALL:HEMY_ECOLI (SWALL:P09128) (398 aa) fasta scores: E(): 3.8e-08, 23.27% id in 391 aa, and to Ralstonia solanacearum protein porphyrin biosynthesis rsc2355 or rs01191 SWALL:Q8XWW5 (EMBL:AL646069) (397 aa) fasta scores: E(): 2e-69, 50.63% id in 393 aa; porphyrin biosynthesis-like protein 1185764..1186954 Burkholderia pseudomallei K96243 3091801 YP_107646.1 CDS BPSL1018 NC_006350.1 1187123 1188430 R Similar to Agrobacterium vitis tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 4.4e-75, 48.32% id in 418 aa, and to Ralstonia solanacearum probable permease transmembrane protein rsc2352 or rs01194 SWALL:Q8XWW8 (EMBL:AL646069) (442 aa) fasta scores: E(): 1.2e-121, 72.1% id in 441 aa; permease transmembrane protein complement(1187123..1188430) Burkholderia pseudomallei K96243 3091802 YP_107647.1 CDS fabG NC_006350.1 1188469 1189227 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(1188469..1189227) Burkholderia pseudomallei K96243 3092104 YP_107648.1 CDS BPSL1020 NC_006350.1 1189316 1190755 R Similar to Escherichia coli aldehyde dehydrogenase AldH or b1300 SWALL:DHAL_ECOLI (SWALL:P23883) (495 aa) fasta scores: E(): 2.3e-61, 41.12% id in 479 aa, and to Ralstonia solanacearum probable aldehyde dehydrogenase oxidoreductase rsc2350 or rs01196 SWALL:Q8XWX0 (EMBL:AL646069) (478 aa) fasta scores: E(): 5.1e-138, 73.31% id in 476 aa; aldehyde dehydrogenase complement(1189316..1190755) Burkholderia pseudomallei K96243 3092105 YP_107649.1 CDS ppa NC_006350.1 1190916 1191443 D catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1190916..1191443 Burkholderia pseudomallei K96243 3094000 YP_107650.1 CDS BPSL1022 NC_006350.1 1191502 1192266 R Possible gene remnant. Only N-terminal region similar to Xanthomonas axonopodis pv. citri str. 306 conserved hypothetical protein xac3202 SWALL:AAM38046 (EMBL:AE011966) (102 aa) fasta scores: E(): 3.9e-06, 49.46% id in 93 aa, and to Escherichia coli hypothetical protein YhbQ or b3155 SWALL:YHBQ_ECOLI (SWALL:P45472) (100 aa) fasta scores: E(): 0.00018, 44.89% id in 98 aa. C-terminal region presents no database matches; hypothetical protein complement(1191502..1192266) Burkholderia pseudomallei K96243 3093404 YP_107651.1 CDS BPSL1025 NC_006350.1 1193265 1194443 R Similar to Ralstonia solanacearum hypothetical protein rsc2348 or rs01198 SWALL:Q8XWX2 (EMBL:AL646069) (408 aa) fasta scores: E(): 1.1e-98, 62.43% id in 394 aa, and to Pseudomonas aeruginosa hypothetical protein pa3230 SWALL:Q9HZ10 (EMBL:AE004746) (374 aa) fasta scores: E(): 2.4e-63, 47.48% id in 377 aa; hypothetical protein complement(1193265..1194443) Burkholderia pseudomallei K96243 3094827 YP_107652.1 CDS nadE NC_006350.1 1194534 1196264 D NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1194534..1196264 Burkholderia pseudomallei K96243 3092495 YP_107653.1 CDS glnB2 NC_006350.1 1196325 1196663 D Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi nitrogen regulatory protein P-II 1 GlnB or b2553 or z3829 or ecs3419 or stm2561 or sty2808 SWALL:GLNB_ECOLI (SWALL:P05826) (112 aa) fasta scores: E(): 3.1e-30, 77.67% id in 112 aa, and to Ralstonia solanacearum probable nitrogen regulatory P-II transcription regulator protein rsc2345 or rs01201 SWALL:Q8XWX5 (EMBL:AL646069) (112 aa) fasta scores: E(): 6.7e-32, 83.92% id in 112 aa; nitrogen regulatory protein P-II 2 1196325..1196663 Burkholderia pseudomallei K96243 3093736 YP_107654.1 CDS tnpA NC_006350.1 1197036 1198256 R Highly similar to to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 2.5e-139, 78.57% id in 406 aa, and to Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 1.5e-161, 99.22% id in 386 aa. CDS is extended at the N-terminus in comparison to B. mallei protein; transposase complement(1197036..1198256) Burkholderia pseudomallei K96243 3092420 YP_107655.1 CDS BPSL1029 NC_006350.1 1198437 1199537 R Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.9e-11, 29.97% id in 387 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc2136 or rs01467 SWALL:Q8XXH8 (EMBL:AL646068) (352 aa) fasta scores: E(): 3.6e-43, 41.22% id in 376 aa; exported outer membrane porin complement(1198437..1199537) Burkholderia pseudomallei K96243 3092496 YP_107656.1 CDS hisP NC_006350.1 1200419 1201198 R Similar to Escherichia coli histidine transport ATP-binding protein HisP or b2306 SWALL:HISP_ECOLI (SWALL:P07109) (257 aa) fasta scores: E(): 4.6e-62, 70.86% id in 254 aa, and to Pseudomonas aeruginosa arginine/ornithine transport ATP-binding protein pa0892 SWALL:AOTP_PSEAE (SWALL:O30506) (254 aa) fasta scores: E(): 4e-62, 71.76% id in 255 aa; histidine transport ATP-binding protein complement(1200419..1201198) Burkholderia pseudomallei K96243 3094486 YP_107657.1 CDS hisM NC_006350.1 1201221 1201934 R Similar to Escherichia coli, and Escherichia coli O157:H7 histidine transport system permease HisM or b2307 or z3569 or ecs3191 SWALL:HISM_ECOLI (SWALL:P20091) (238 aa) fasta scores: E(): 3.6e-64, 67.09% id in 234 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2925 SWALL:Q9HZS2 (EMBL:AE004718) (237 aa) fasta scores: E(): 6.9e-66, 68.93% id in 235 aa; histidine transport system permease complement(1201221..1201934) Burkholderia pseudomallei K96243 3094354 YP_107658.1 CDS hisQ NC_006350.1 1201931 1202620 R Similar to Escherichia coli histidine transport system permease HisQ or b2308 SWALL:HISQ_ECOLI (SWALL:P52094) (228 aa) fasta scores: E(): 5.8e-53, 62.11% id in 227 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2924 SWALL:Q9HZS3 (EMBL:AE004718) (229 aa) fasta scores: E(): 2.8e-57, 68.14% id in 226 aa; histidine transport system permease complement(1201931..1202620) Burkholderia pseudomallei K96243 3094529 YP_107659.1 CDS hisJ NC_006350.1 1202831 1203607 R Similar to Escherichia coli, and Escherichia coli O157:H7 histidine-binding periplasmic protein precursor HisJ or b2309 or z3571 or ecs3193 SWALL:HISJ_ECOLI (SWALL:P39182) (260 aa) fasta scores: E(): 3.2e-55, 55.81% id in 258 aa, and to Salmonella typhi histidine-binding periplasmic protein sty2584 SWALL:Q8Z510 (EMBL:AL627274) (260 aa) fasta scores: E(): 7.6e-55, 55.81% id in 258 aa; histidine-binding periplasmic protein complement(1202831..1203607) Burkholderia pseudomallei K96243 3094022 YP_107660.1 CDS BPSL1034 NC_006350.1 1204000 1204698 D Similar to Ralstonia solanacearum pirin-like protein rsc2208 or rs01391 SWALL:Q8XXA8 (EMBL:AL646068) (232 aa) fasta scores: E(): 1.8e-53, 58.44% id in 231 aa, and to Lycopersicon esculentum pirin-like protein SWALL:PIRL_LYCES (SWALL:Q9SEE4) (291 aa) fasta scores: E(): 2.3e-09, 33.33% id in 171 aa; hypothetical protein 1204000..1204698 Burkholderia pseudomallei K96243 3091914 YP_107661.1 CDS BPSL1035 NC_006350.1 1205046 1205744 R hypothetical protein complement(1205046..1205744) Burkholderia pseudomallei K96243 3091915 YP_107662.1 CDS BPSL1036 NC_006350.1 1205833 1206558 D Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi transcriptional regulatory protein OmpR SWALL:OMPR_ECOLI (SWALL:P03025) (239 aa) fasta scores: E(): 5.3e-42, 52.15% id in 232 aa, and to Ralstonia solanacearum probable two component response regulator transcription regulator protein rsp1196 or rs03140 SWALL:Q8XQM6 (EMBL:AL646083) (245 aa) fasta scores: E(): 7.1e-56, 63.33% id in 240 aa; two-component system, response regulator 1205833..1206558 Burkholderia pseudomallei K96243 3094647 YP_107663.1 CDS BPSL1037 NC_006350.1 1206542 1207855 D Similar to Escherichia coli osmolarity sensor protein EnvZ or OmpB or PerA or Tpo or b3404 SWALL:ENVZ_ECOLI (SWALL:P02933) (450 aa) fasta scores: E(): 1.9e-24, 29.69% id in 431 aa, and to Ralstonia solanacearum probable two component transmembrane sensor kinase transcription regulator protein rsp1195 or rs03139 SWALL:Q8XQM7 (EMBL:AL646083) (431 aa) fasta scores: E(): 2.2e-59, 44.86% id in 428 aa; two-component system, sensor kinase 1206542..1207855 Burkholderia pseudomallei K96243 3094648 YP_107664.1 CDS BPSL1038 NC_006350.1 1207929 1208195 R hypothetical protein complement(1207929..1208195) Burkholderia pseudomallei K96243 3093799 YP_107665.1 CDS BPSL1038a NC_006350.1 1208322 1208597 R Doubtful CDS. No significant database matches; hypothetical protein complement(1208322..1208597) Burkholderia pseudomallei K96243 3093800 YP_107666.1 CDS BPSL1039 NC_006350.1 1208692 1210449 D Similar to Xylella fastidiosa ABC transporter nitrate permease xf0411 SWALL:Q9PG91 (EMBL:AE003892) (584 aa) fasta scores: E(): 9.1e-137, 58.16% id in 588 aa, and to Ralstonia solanacearum transmembrane ABC transporter protein rsc3371 or rs02646 SWALL:Q8XU23 (EMBL:AL646075) (586 aa) fasta scores: E(): 1.6e-124, 53.6% id in 569 aa; ABC transporter membrane protein 1208692..1210449 Burkholderia pseudomallei K96243 3091509 YP_107667.1 CDS BPSL1040 NC_006350.1 1210503 1211843 D Similar to Xylella fastidiosa nitrate ABC transporter ATP-binding protein xf0412 SWALL:Q9PG90 (EMBL:AE003892) (433 aa) fasta scores: E(): 4.1e-86, 61.79% id in 424 aa, and to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc3372 or rs02647 SWALL:Q8XU22 (EMBL:AL646075) (449 aa) fasta scores: E(): 1.9e-67, 50.7% id in 426 aa; ABC transporter ATP-binding protein 1210503..1211843 Burkholderia pseudomallei K96243 3091510 YP_107668.1 CDS BPSL1041 NC_006350.1 1212010 1212171 R hypothetical protein complement(1212010..1212171) Burkholderia pseudomallei K96243 3092993 YP_107669.1 CDS BPSL1042 NC_006350.1 1212228 1212734 R lipoprotein complement(1212228..1212734) Burkholderia pseudomallei K96243 3092994 YP_107670.1 CDS BPSL1043 NC_006350.1 1212731 1213282 R lipoprotein complement(1212731..1213282) Burkholderia pseudomallei K96243 3093837 YP_107671.1 CDS otsA NC_006350.1 1213901 1215319 D UDP-forming; Similar to Escherichia coli alpha,alpha-trehalose-phosphate synthase [UDP-forming] OtsA or b1896 SWALL:OTSA_ECOLI (SWALL:P31677) (473 aa) fasta scores: E(): 3.6e-95, 51.94% id in 464 aa, and to Ralstonia solanacearum probable alpha,alpha-trehalose-phosphate synthase rsp1105 or rs02613 SWALL:Q8XQW3 (EMBL:AL646082) (465 aa) fasta scores: E(): 2.4e-118, 63.93% id in 463 aa; alpha,alpha-trehalose-phosphate synthase 1213901..1215319 Burkholderia pseudomallei K96243 3092835 YP_107672.1 CDS BPSL1045 NC_006350.1 1215312 1215914 D Similar to Rhizobium loti hypothetical protein mlr1469 SWALL:Q98KH7 (EMBL:AP002997) (183 aa) fasta scores: E(): 4.1e-37, 59.64% id in 171 aa, and to Chlorobium tepidum TLS conserved hypothetical protein ct0928 SWALL:AAM72163 (EMBL:AE012858) (197 aa) fasta scores: E(): 3.2e-24, 45.97% id in 174 aa; hypothetical protein 1215312..1215914 Burkholderia pseudomallei K96243 3093838 YP_107673.1 CDS BPSL1046 NC_006350.1 1216087 1216698 R hypothetical protein complement(1216087..1216698) Burkholderia pseudomallei K96243 3093344 YP_107674.1 CDS BPSL1047 NC_006350.1 1217068 1217325 D hypothetical protein 1217068..1217325 Burkholderia pseudomallei K96243 3093345 YP_107675.1 CDS BPSL1048 NC_006350.1 1217526 1218953 R Similar to Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 6.1e-33, 31.17% id in 417 aa, and to Yersinia pestis transport protein ypo1712 SWALL:Q8ZFJ1 (EMBL:AJ414150) (455 aa) fasta scores: E(): 1.7e-100, 61.77% id in 450 aa; sugar transport, integral membrane protein complement(1217526..1218953) Burkholderia pseudomallei K96243 3094165 YP_107676.1 CDS BPSL1049 NC_006350.1 1219023 1219535 R Similar to Escherichia coli protein YbcL precursor or b0545 SWALL:YBCL_ECOLI (SWALL:P77368) (183 aa) fasta scores: E(): 5.1e-29, 49.39% id in 166 aa, and to Salmonella typhimurium outer membrane protein stm1081 SWALL:Q8ZQ63 (EMBL:AE008747) (182 aa) fasta scores: E(): 3.1e-24, 47.2% id in 161 aa; hypothetical protein complement(1219023..1219535) Burkholderia pseudomallei K96243 3094166 YP_107677.1 CDS BPSL1050 NC_006350.1 1220110 1220490 R hypothetical protein complement(1220110..1220490) Burkholderia pseudomallei K96243 3091599 YP_107678.1 CDS BPSL1053 NC_006350.1 1221524 1221904 R No significant database matches. Rich in glycine amino acid residues; lipoprotein complement(1221524..1221904) Burkholderia pseudomallei K96243 3094633 YP_107679.1 CDS eco NC_006350.1 1222077 1222616 D serine protease inhibitor, inhibits trypsin and other proteases; ecotin 1222077..1222616 Burkholderia pseudomallei K96243 3094320 YP_107680.1 CDS BPSL1055 NC_006350.1 1222714 1223850 R Similar to Escherichia coli penicillin-binding protein 7 precursor PbpG or b2134 SWALL:PBP7_ECOLI (SWALL:P33364) (313 aa) fasta scores: E(): 1.8e-32, 44.35% id in 257 aa, and to Ralstonia solanacearum D-alanyl-D-alanine-endopeptidase rsc1609 or rs03972 SWALL:Q8XYZ7 (EMBL:AL646065) (375 aa) fasta scores: E(): 7.6e-44, 45.56% id in 338 aa; murein-DD-endopeptidase complement(1222714..1223850) Burkholderia pseudomallei K96243 3094634 YP_107681.1 CDS BPSL1057 NC_006350.1 1224788 1225264 D Similar to Pseudomonas aeruginosa inhibitor of vertebrate lysozyme precursor Ivy or pa3902 SWALL:IVY_PSEAE (SWALL:Q9HXB1) (153 aa) fasta scores: E(): 2.1e-16, 33.55% id in 152 aa, and to Yersinia pestis hypothetical protein precursor ypo2857 SWALL:YS57_YERPE (SWALL:P58483) (154 aa) fasta scores: E(): 1.4e-19, 34.64% id in 153 aa; hypothetical protein 1224788..1225264 Burkholderia pseudomallei K96243 3093766 YP_107682.1 CDS BPSL1059 NC_006350.1 1227014 1227298 D Similar to, although shorter in its N-terminal region than, Ralstonia solanacearum hypothetical protein rsc2240 or rs01359 SWALL:Q8XX76 (EMBL:AL646069) (96 aa) fasta scores: E(): 5e-05, 35.52% id in 76 aa; hypothetical protein 1227014..1227298 Burkholderia pseudomallei K96243 3093171 YP_107683.1 CDS BPSL1060 NC_006350.1 1227309 1227611 D hypothetical protein 1227309..1227611 Burkholderia pseudomallei K96243 3091573 YP_107684.1 CDS BPSL1061 NC_006350.1 1227608 1227826 D Very low similarity to the C-terminal region of Rhizobium loti hypothetical protein msl2450 SWALL:Q98ID6 (EMBL:AP002999) (97 aa) fasta scores: E(): 6.7, 35.41% id in 48 aa; hypothetical protein 1227608..1227826 Burkholderia pseudomallei K96243 3091574 YP_107685.1 CDS infA NC_006350.1 1228340 1228606 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1228340..1228606 Burkholderia pseudomallei K96243 3092726 YP_107686.1 CDS BPSL1063 NC_006350.1 1228626 1228970 D hypothetical protein 1228626..1228970 Burkholderia pseudomallei K96243 3093527 YP_107687.1 CDS BPSL1064 NC_006350.1 1229071 1229997 R Similar to the N-terminal region of Pseudomonas aeruginosa probable short-chain dehydrogenase pa3324 SWALL:Q9HYS1 (EMBL:AE004754) (592 aa) fasta scores: E(): 7.6e-35, 35.19% id in 304 aa, and to Mycobacterium tuberculosis probable oxidoreductase rv2214c or mt2270 or mtcy190.25c SWALL:EPHD_MYCTU (SWALL:Q10402) (592 aa) fasta scores: E(): 7.3e-26, 32.78% id in 302 aa; dehydrogenase complement(1229071..1229997) Burkholderia pseudomallei K96243 3093528 YP_107688.1 CDS BPSL1065 NC_006350.1 1230018 1231604 R hypothetical protein complement(1230018..1231604) Burkholderia pseudomallei K96243 3093116 YP_107689.1 CDS rubA NC_006350.1 1232050 1232232 R Similar to Acinetobacter calcoaceticus rubredoxin RubA SWALL:RUBR_ACICA (SWALL:P42453) (54 aa) fasta scores: E(): 4.1e-12, 55.76% id in 52 aa, and to Ralstonia solanacearum probable rubredoxin protein rsc0667 or rs01572 SWALL:Q8Y1M3 (EMBL:AL646060) (60 aa) fasta scores: E(): 3.6e-15, 55.93% id in 59 aa; rubredoxin complement(1232050..1232232) Burkholderia pseudomallei K96243 3094654 YP_107690.1 CDS BPSL1067 NC_006350.1 1232690 1233145 D Similar to Pseudomonas aeruginosa hypothetical protein pa0315 SWALL:Q9I6H6 (EMBL:AE004469) (145 aa) fasta scores: E(): 2.8e-15, 48.85% id in 131 aa; hypothetical protein 1232690..1233145 Burkholderia pseudomallei K96243 3093117 YP_107691.1 CDS BPSL1068 NC_006350.1 1233313 1235259 D Similar to Escherichia coli ABC transporter ATP-binding protein Uup or b0949 SWALL:UUP_ECOLI (SWALL:P43672) (635 aa) fasta scores: E(): 8.9e-80, 47.9% id in 643 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0975 or rs04385 SWALL:Q8Y0R8 (EMBL:AL646062) (636 aa) fasta scores: E(): 3e-119, 70.74% id in 646 aa; ABC transporter ATP-binding protein 1233313..1235259 Burkholderia pseudomallei K96243 3093263 YP_107692.1 CDS parE NC_006350.1 1235465 1237447 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1235465..1237447 Burkholderia pseudomallei K96243 3093443 YP_107693.1 CDS parC NC_006350.1 1237506 1239824 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1237506..1239824 Burkholderia pseudomallei K96243 3093260 YP_107694.1 CDS BPSL1071 NC_006350.1 1240517 1240975 D Similar to Pseudomonas aeruginosa hypothetical protein pa1044 SWALL:Q9I4T0 (EMBL:AE004536) (154 aa) fasta scores: E(): 9.5e-16, 43.91% id in 148 aa; hypothetical protein 1240517..1240975 Burkholderia pseudomallei K96243 3093264 YP_107695.1 CDS BPSL1072 NC_006350.1 1241121 1242005 R Similar to Pseudomonas aeruginosa transcriptional regulator PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 3.1e-10, 32.36% id in 275 aa, and to Ralstonia solanacearum transcription regulator protein rsp1514 or rs04791 SWALL:Q8XPX2 (EMBL:AL646085) (294 aa) fasta scores: E(): 2.1e-79, 73.72% id in 293 aa; LysR family transcriptional regulator complement(1241121..1242005) Burkholderia pseudomallei K96243 3093453 YP_107696.1 CDS BPSL1073 NC_006350.1 1242099 1242566 D Similar to, although longer in its N-terminal region than, Ralstonia solanacearum hypothetical transmembrane protein rsp1513 or rs04790 SWALL:Q8XPX3 (EMBL:AL646085) (145 aa) fasta scores: E(): 7.6e-33, 62.06% id in 145 aa, and to Pseudomonas aeruginosa hypothetical protein pa2880 SWALL:Q9HZW7 (EMBL:AE004714) (171 aa) fasta scores: E(): 6.1e-28, 53.42% id in 146 aa (although BPSL10073 is shorter in its N-terminal region); hypothetical protein 1242099..1242566 Burkholderia pseudomallei K96243 3093454 YP_107697.1 CDS BPSL1074 NC_006350.1 1242775 1243737 R Similar to Rhizobium meliloti transcriptional regulator, LysR family protein rb0846 or smb21180 SWALL:Q92V68 (EMBL:AL603645) (317 aa) fasta scores: E(): 2.4e-35, 37.83% id in 296 aa, and to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 1.8e-12, 28.01% id in 282 aa. Note: This CDS is longer in its N-terminal region than the database matches; LysR family transcriptional regulator complement(1242775..1243737) Burkholderia pseudomallei K96243 3091778 YP_107698.1 CDS BPSL1075 NC_006350.1 1243953 1245266 D Similar to Escherichia coli shikimate transporter ShiA or b1981 SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 2.5e-54, 40% id in 420 aa, and to Pseudomonas aeruginosa probable MFS transporter pa3595 SWALL:Q9HY31 (EMBL:AE004780) (469 aa) fasta scores: E(): 1.6e-65, 46.24% id in 413 aa; transport system integral membrane protein 1243953..1245266 Burkholderia pseudomallei K96243 3091779 YP_107699.1 CDS BPSL1076 NC_006350.1 1245268 1246530 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1245268..1246530 Burkholderia pseudomallei K96243 3094800 YP_107700.1 CDS BPSL1078 NC_006350.1 1246813 1247838 D Similar to Rhizobium loti acetylpolyamine aminohydrolase mll0103 SWALL:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 3.1e-63, 48.67% id in 339 aa, and to Pseudomonas aeruginosa acetylpolyamine aminohydrolase pa1409 SWALL:Q9I3T5 (EMBL:AE004570) (346 aa) fasta scores: E(): 5.6e-47, 42.57% id in 350 aa; aminohydrolase 1246813..1247838 Burkholderia pseudomallei K96243 3094801 YP_107701.1 CDS BPSL1079 NC_006350.1 1248218 1249411 R Similar to Alcaligenes eutrophus chromate transport protein ChrA SWALL:CHRA_ALCEU (SWALL:P17551) (401 aa) fasta scores: E(): 9.9e-12, 24.8% id in 387 aa, and to Bacillus halodurans chromate transporter bh0574 SWALL:Q9KFB1 (EMBL:AP001509) (397 aa) fasta scores: E(): 5.1e-19, 26.14% id in 394 aa; metal transport integral membrane protein complement(1248218..1249411) Burkholderia pseudomallei K96243 3093557 YP_107702.1 CDS BPSL1080 NC_006350.1 1249558 1251918 R Similar in its C-terminal region to the C-terminal region of Ralstonia solanacearum hypothetical protein rsp1155 or rs05432 SWALL:Q8XQR6 (EMBL:AL646083) (915 aa) fasta scores: E(): 3.9e-66, 44.51% id in 447 aa, and similar in its full length to the C-terminal region of Pseudomonas aeruginosa hypothetical protein pa4601 SWALL:Q9HVI8 (EMBL:AE004874) (1415 aa) fasta scores: E(): 1.7e-59, 31.6% id in 753 aa; hypothetical protein complement(1249558..1251918) Burkholderia pseudomallei K96243 3093558 YP_107703.1 CDS BPSL1081 NC_006350.1 1252138 1253037 R Similar to Erwinia chrysanthemi antibiotic biosynthesis protein Pab SWALL:Q93KB5 (EMBL:AJ310612) (293 aa) fasta scores: E(): 2.4e-43, 50.5% id in 295 aa, and to Xanthomonas axonopodis pv. citri str. 306 conserved hypothetical protein xac2912 SWALL:AAM37757 (EMBL:AE011933) (292 aa) fasta scores: E(): 1.3e-33, 45.39% id in 293 aa; phenazine biosynthesis-like protein complement(1252138..1253037) Burkholderia pseudomallei K96243 3094040 YP_107704.1 CDS BPSL1082 NC_006350.1 1253042 1253509 R Similar to Ralstonia solanacearum hypothetical protein rsc0986 or rs04306 SWALL:Q8Y0Q7 (EMBL:AL646062) (156 aa) fasta scores: E(): 1.9e-40, 73.71% id in 156 aa, and to Mycobacterium leprae hypothetical protein ml2304 SWALL:Q9CB89 (EMBL:AL583925) (174 aa) fasta scores: E(): 3e-21, 50.66% id in 150 aa; hypothetical protein complement(1253042..1253509) Burkholderia pseudomallei K96243 3094041 YP_107705.1 CDS BPSL1083 NC_006350.1 1253565 1254767 R Similar to Ralstonia solanacearum probable aminotransferase rsc0985 or rs04307 SWALL:Q8Y0Q8 (EMBL:AL646062) (406 aa) fasta scores: E(): 1.9e-100, 64.97% id in 394 aa, and to Xanthomonas axonopodis pv. citri str. 306 valine-pyruvate aminotransferase AvtA SWALL:AAM36720 (EMBL:AE011819) (427 aa) fasta scores: E(): 1e-95, 64.24% id in 386 aa; aminotransferase complement(1253565..1254767) Burkholderia pseudomallei K96243 3093516 YP_107706.1 CDS BPSL1084 NC_006350.1 1254807 1255715 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0987 or rs04305 SWALL:Q8Y0Q6 (EMBL:AL646062) (313 aa) fasta scores: E(): 3.2e-49, 53.69% id in 298 aa, and to Agrobacterium tumefaciens conserved hypothetical protein, membrane protein atu0234 or agr_c_394 SWALL:Q8UIQ9 (EMBL:AE008996) (291 aa) fasta scores: E(): 9.9e-38, 45.42% id in 295 aa; hypothetical protein complement(1254807..1255715) Burkholderia pseudomallei K96243 3093517 YP_107707.1 CDS BPSL1085 NC_006350.1 1255816 1256499 R Similar to Deinococcus radiodurans hypothetical protein dr2014 SWALL:Q9RSV8 (EMBL:AE002038) (207 aa) fasta scores: E(): 1.6e-14, 48.4% id in 219 aa; hypothetical protein complement(1255816..1256499) Burkholderia pseudomallei K96243 3094532 YP_107708.1 CDS BPSL1086 NC_006350.1 1256635 1258104 D Similar to Ralstonia solanacearum transcription regulator protein rsc0989 or rs04303 SWALL:Q8Y0Q4 (EMBL:AL646062) (490 aa) fasta scores: E(): 1.5e-129, 68.66% id in 485 aa, and to Brucella melitensis transcriptional regulator, GntR family / aminotransferase class-I bmei0169 SWALL:Q8YJB7 (EMBL:AE009459) (484 aa) fasta scores: E(): 2.9e-65, 43.75% id in 464 aa; GntR family transcriptional regulator 1256635..1258104 Burkholderia pseudomallei K96243 3094533 YP_107709.1 CDS htpG NC_006350.1 1258240 1260138 D molecular chaperone; heat shock protein 90 1258240..1260138 Burkholderia pseudomallei K96243 3091971 YP_107710.1 CDS BPSL1088 NC_006350.1 1260147 1260740 D Similar to Ralstonia solanacearum hypothetical protein rsc2780 or rs00067 SWALL:Q8XVQ0 (EMBL:AL646071) (176 aa) fasta scores: E(): 2.8e-10, 37.58% id in 157 aa, and to Pseudomonas aeruginosa hypothetical protein pa5357 SWALL:Q9HTK1 (EMBL:AE004947) (178 aa) fasta scores: E(): 3e-05, 34.8% id in 181 aa; hypothetical protein 1260147..1260740 Burkholderia pseudomallei K96243 3091588 YP_107711.1 CDS BPSL1089 NC_006350.1 1260737 1261216 D Similar to Ralstonia solanacearum hypothetical protein rsc0991 or rs04301 SWALL:Q8Y0Q2 (EMBL:AL646062) (166 aa) fasta scores: E(): 7.6e-34, 60.51% id in 157 aa, and to Methanosarcina mazei Goe1 conserved protein mm1651 SWALL:AAM31347 (EMBL:AE013399) (158 aa) fasta scores: E(): 6.7e-25, 51.4% id in 142 aa; hypothetical protein 1260737..1261216 Burkholderia pseudomallei K96243 3091589 YP_107712.1 CDS BPSL1091 NC_006350.1 1261467 1262396 D Similar to Ralstonia solanacearum hypothetical protein rsc0995 or rs04297 SWALL:Q8Y0P8 (EMBL:AL646062) (295 aa) fasta scores: E(): 7e-62, 58.36% id in 305 aa, and to Neisseria meningitidis transferase nma1087 or nmb0869 SWALL:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.4e-21, 31.83% id in 245 aa; hypothetical protein 1261467..1262396 Burkholderia pseudomallei K96243 3093821 YP_107713.1 CDS BPSL1092 NC_006350.1 1262588 1262827 D Similar to Thermoplasma volcanium hypothetical protein tv1324 or tvg1365320 SWALL:Q978U1 (EMBL:AP000996) (66 aa) fasta scores: E(): 3.5e-06, 46.15% id in 52 aa, and to Thermoplasma acidophilum hypothetical membrane protein ta0299 SWALL:Q9HLC9 (EMBL:AL445063) (86 aa) fasta scores: E(): 6.1e-06, 44.23% id in 52 aa; hypothetical protein 1262588..1262827 Burkholderia pseudomallei K96243 3093822 YP_107714.1 CDS BPSL1093 NC_006350.1 1262824 1264374 D Similar to Streptomyces coelicolor permease sco5229 or Sc7E4.26c SWALL:Q9K494 (EMBL:AL359214) (532 aa) fasta scores: E(): 5.9e-102, 58.25% id in 527 aa, and to Sulfolobus solfataricus metabolite permease, sso2476 SWALL:Q97VX6 (EMBL:AE006846) (505 aa) fasta scores: E(): 1.9e-75, 45.11% id in 501 aa; hypothetical protein 1262824..1264374 Burkholderia pseudomallei K96243 3093487 YP_107715.1 CDS BPSL1094 NC_006350.1 1264502 1264936 R Similar to Ralstonia solanacearum hypothetical protein rsp0601 or rs03878 SWALL:Q8XS80 (EMBL:AL646079) (143 aa) fasta scores: E(): 2e-23, 52.38% id in 147 aa, and to Escherichia coli PhnB protein b4107 SWALL:PHNB_ECOLI (SWALL:P16681) (147 aa) fasta scores: E(): 6e-15, 39.16% id in 143 aa; hypothetical protein complement(1264502..1264936) Burkholderia pseudomallei K96243 3093488 YP_107716.1 CDS talB NC_006350.1 1265301 1266254 R Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B complement(1265301..1266254) Burkholderia pseudomallei K96243 3094101 YP_107717.1 CDS BPSL1096 NC_006350.1 1266656 1267873 R Similar to, although longer in its N-terminal region than, Acinetobacter calcoaceticus benzoate membrane transport protein BenE SWALL:BENE_ACICA (SWALL:P07775) (394 aa) fasta scores: E(): 9.6e-57, 43.38% id in 378 aa, and to Pseudomonas putida BenE SWALL:Q9L7Y0 (EMBL:AF218267) (399 aa) fasta scores: E(): 6.5e-66, 48.83% id in 385 aa; transport related membrane protein complement(1266656..1267873) Burkholderia pseudomallei K96243 3092612 YP_107718.1 CDS BPSL1097 NC_006350.1 1267966 1269141 R Similar to Ralstonia solanacearum hypothetical protein rsc0996 or rs04296 SWALL:Q8Y0P7 (EMBL:AL646062) (391 aa) fasta scores: E(): 1.1e-126, 78.57% id in 392 aa, and to Pseudomonas aeruginosa hypothetical protein pa2705 SWALL:Q9I0D7 (EMBL:AE004698) (393 aa) fasta scores: E(): 8.7e-96, 59.03% id in 393 aa; hypothetical protein complement(1267966..1269141) Burkholderia pseudomallei K96243 3092613 YP_107719.1 CDS BPSL1098 NC_006350.1 1269354 1270196 R Similar to, although shorter in its N-terminal region than, Ralstonia solanacearum hypothetical protein rsc0998 or rs04294 SWALL:Q8Y0P5 (EMBL:AL646062) (290 aa) fasta scores: E(): 5.8e-87, 84.94% id in 279 aa, and to Pseudomonas aeruginosa hypothetical protein pa2707 SWALL:Q9I0D5 (EMBL:AE004698) (281 aa) fasta scores: E(): 3.6e-73, 71.84% id in 277 aa; hypothetical protein complement(1269354..1270196) Burkholderia pseudomallei K96243 3091862 YP_107720.1 CDS BPSL1099 NC_006350.1 1270430 1270789 D Similar to Ralstonia solanacearum periplasmic cytochrome type-C oxidoreductase signal peptide protein rsc0999 or rs04293 SWALL:Q8Y0P4 (EMBL:AL646062) (115 aa) fasta scores: E(): 1.5e-21, 58.77% id in 114 aa, and to Marinobacter hydrocarbonoclasticus cytochrome C-552 SWALL:C552_MARHY (SWALL:P82903) (88 aa) fasta scores: E(): 2.1e-06, 41.11% id in 90 aa; cytochrome C -like protein 1270430..1270789 Burkholderia pseudomallei K96243 3091863 YP_107721.1 CDS BPSL1100 NC_006350.1 1270830 1271198 D Similar to Ralstonia solanacearum periplasmic cytochrome type-C oxidoreductase signal peptide protein rsc1000 or rs04292 SWALL:Q8Y0P3 (EMBL:AL646062) (133 aa) fasta scores: E(): 2.3e-12, 49.58% id in 121 aa, and to Marinobacter hydrocarbonoclasticus cytochrome C-552 SWALL:C552_MARHY (SWALL:P82903) (88 aa) fasta scores: E(): 3.7e-05, 38.63% id in 88 aa; cytochrome C -like protein 1270830..1271198 Burkholderia pseudomallei K96243 3094148 YP_107722.1 CDS BPSL1101 NC_006350.1 1271697 1272248 R Similar to Ralstonia solanacearum hypothetical protein rsc1001 or rs04291 SWALL:Q8Y0P2 (EMBL:AL646062) (170 aa) fasta scores: E(): 1.1e-36, 63.12% id in 141 aa, and to Neisseria meningitidis hypothetical protein nma1720 SWALL:Q9JTL8 (EMBL:AL162756) (156 aa) fasta scores: E(): 2.9e-18, 43.57% id in 140 aa. Note: Similarity in both cases starts in residue no. 40; hypothetical protein complement(1271697..1272248) Burkholderia pseudomallei K96243 3094149 YP_107723.1 CDS BPSL1102 NC_006350.1 1272686 1273756 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1002 or rs04290 SWALL:Q8Y0P1 (EMBL:AL646062) (312 aa) fasta scores: E(): 8.7e-50, 57.6% id in 309 aa, and to Aeropyrum pernix hypothetical protein ape0076 SWALL:Q9YG25 (EMBL:AP000058) (296 aa) fasta scores: E(): 8.3e-14, 34.23% id in 295 aa; hypothetical protein 1272686..1273756 Burkholderia pseudomallei K96243 3091536 YP_107724.1 CDS nth NC_006350.1 1273889 1274533 R Similar to Escherichia coli endonuclease III Nth or b1633 SWALL:END3_ECOLI (SWALL:P20625) (211 aa) fasta scores: E(): 7.6e-52, 68.26% id in 208 aa, and to Ralstonia solanacearum probable endonuclease III protein rsc1005 or rs04287 SWALL:Q8Y0N8 (EMBL:AL646062) (214 aa) fasta scores: E(): 1.9e-64, 78.77% id in 212 aa; endonuclease III complement(1273889..1274533) Burkholderia pseudomallei K96243 3093395 YP_107725.1 CDS BPSL1104 NC_006350.1 1274538 1275410 R Involved in the electron transport chain; ferredoxin complement(1274538..1275410) Burkholderia pseudomallei K96243 3091537 YP_107726.1 CDS BPSL1105 NC_006350.1 1275668 1276300 D Similar to Ralstonia solanacearum probable transcription regulator protein rsc1007 or rs04285 SWALL:Q8Y0N6 (EMBL:AL646062) (239 aa) fasta scores: E(): 1.6e-45, 54.9% id in 204 aa, and to Agrobacterium tumefaciens transcriptional regulator, TetR family atu3115 or agr_l_1690gM SWALL:Q8UBA1 (EMBL:AE009242) (232 aa) fasta scores: E(): 8.1e-30, 48.12% id in 187 aa; TetR family regulatory protein 1275668..1276300 Burkholderia pseudomallei K96243 3093813 YP_107727.1 CDS BPSL1106 NC_006350.1 1276435 1277901 R N-terminal region similar to Alcaligenes eutrophus intracellular PHB depolymerase PhaZRE SWALL:O87189 (EMBL:AB017612) (419 aa) fasta scores: E(): 3.9e-118, 77.91% id in 412 aa, and to Ralstonia solanacearum probable poly[D(-)-3-hydroxybutyrate] depolymerase PhaZ or rsc1008 or rs04284 SWALL:Q8Y0N5 (EMBL:AL646062) (422 aa) fasta scores: E(): 3.7e-119, 76.73% id in 417 aa, and C-terminal region similar to Trypanosoma cruzi histone h1.c8/h1.m1 SWALL:H1C8_TRYCR (SWALL:P40270) (74 aa) fasta scores: E(): 2.8, 44.06% id in 59 aa; depolymerase/histone-like protein complement(1276435..1277901) Burkholderia pseudomallei K96243 3093814 YP_107728.1 CDS BPSL1107 NC_006350.1 1278121 1279953 R Similar to Streptomyces coelicolor hypothetical protein sco1830 or sci8.15 SWALL:Q9RJ38 (EMBL:AL132644) (595 aa) fasta scores: E(): 6e-137, 57.52% id in 598 aa, and to Ralstonia solanacearum hypothetical protein rsc1458 or rs03849 SWALL:Q8XZE3 (EMBL:AL646064) (619 aa) fasta scores: E(): 1.4e-118, 62% id in 608 aa; hypothetical protein complement(1278121..1279953) Burkholderia pseudomallei K96243 3091503 YP_107729.1 CDS BPSL1108 NC_006350.1 1280130 1281365 D Similar to Pseudomonas aeruginosa hypothetical protein pa4204 SWALL:Q9HWH7 (EMBL:AE004837) (388 aa) fasta scores: E(): 1.8e-55, 46.01% id in 389 aa, and to Ralstonia solanacearum hemagglutinin-related protein rsp0183 or rs04695 SWALL:Q8XTD0 (EMBL:AL646077) (410 aa) fasta scores: E(): 1.2e-33, 35.28% id in 411 aa; hypothetical protein 1280130..1281365 Burkholderia pseudomallei K96243 3091504 YP_107730.1 CDS BPSL1109 NC_006350.1 1281716 1287241 R C-terminal region similar to Escherichia coli cell division protein FtsK or b0890 SWALL:FTSK_ECOLI (SWALL:P46889) (1329 aa) fasta scores: E(): 3.4e-64, 39.91% id in 1125 aa, and N-terminal region to Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 3.1e-25, 26.32% id in 1189 aa. Note: Also contains a repeat region (7x TSAET(A/V)AP(D/N)(D/G/S)H(A/V)(P/S)); hypothetical protein complement(1281716..1287241) Burkholderia pseudomallei K96243 3093823 YP_107731.1 CDS BPSL1110 NC_006350.1 1287413 1287934 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0694 or rs01599 SWALL:Q8Y1J6 (EMBL:AL646060) (246 aa) fasta scores: E(): 1.6e-07, 32.12% id in 165 aa, and to Deinococcus radiodurans hypothetical protein dr1940 SWALL:Q9RT29 (EMBL:AE002033) (403 aa) fasta scores: E(): 1.7e-05, 33.55% id in 152 aa; lipoprotein complement(1287413..1287934) Burkholderia pseudomallei K96243 3093824 YP_107732.1 CDS purT NC_006350.1 1288695 1289909 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1288695..1289909 Burkholderia pseudomallei K96243 3092966 YP_107733.1 CDS BPSL1112 NC_006350.1 1290012 1290233 D Similar to Ralstonia solanacearum probable lipoprotein rsp0401 or rs00829 SWALL:Q8XSR6 (EMBL:AL646078) (55 aa) fasta scores: E(): 7.9e-11, 75.51% id in 49 aa; lipoprotein 1290012..1290233 Burkholderia pseudomallei K96243 3092291 YP_107734.1 CDS BPSL1113 NC_006350.1 1290292 1290678 D Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2496 rsc2496 or rs01100 SWALL:Q8XWH8 (EMBL:AL646070) (151 aa) fasta scores: E(): 2.2e-07, 41.57% id in 89 aa, and to Brucella melitensis hypothetical protein bmei1494 SWALL:Q8YFM6 (EMBL:AE009586) (113 aa) fasta scores: E(): 8.3e-07, 32.75% id in 116 aa; hypothetical protein 1290292..1290678 Burkholderia pseudomallei K96243 3092292 YP_107735.1 CDS rhlE2 NC_006350.1 1291364 1292812 D Similar to Escherichia coli ATP-dependent RNA helicase RhlE or b0797 SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): 3e-74, 52.16% id in 462 aa, and to Ralstonia solanacearum probable ATP-dependent RNA helicase rsc2211 or rs01388 SWALL:Q8XXA5 (EMBL:AL646068) (495 aa) fasta scores: E(): 4.1e-102, 65.59% id in 497 aa; ATP-dependent RNA helicase 2 1291364..1292812 Burkholderia pseudomallei K96243 3092874 YP_107736.1 CDS BPSL1115 NC_006350.1 1293310 1294203 R this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase complement(1293310..1294203) Burkholderia pseudomallei K96243 3092536 YP_107737.1 CDS BPSL1116 NC_006350.1 1294247 1295146 R Similar to Ralstonia solanacearum hypothetical protein rsc2206 or rs01393 SWALL:Q8XXB0 (EMBL:AL646068) (282 aa) fasta scores: E(): 5.6e-65, 63.53% id in 277 aa, and to Rhizobium loti hypothetical protein mll2992 SWALL:YT92_RHILO (SWALL:Q98H78) (309 aa) fasta scores: E(): 8.2e-27, 43.79% id in 274 aa; rhodanese superfamily protein complement(1294247..1295146) Burkholderia pseudomallei K96243 3092537 YP_107738.1 CDS dnaE NC_006350.1 1295759 1299283 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1295759..1299283 Burkholderia pseudomallei K96243 3093623 YP_107739.1 CDS BPSL1118 NC_006350.1 1299323 1301113 D Similar to Escherichia coli, and Escherichia coli O157:H7 probable transport ATP-binding protein MsbA or b0914 or z1260 or ecs0997 SWALL:MSBA_ECOLI (SWALL:P27299) (582 aa) fasta scores: E(): 4.9e-78, 42.05% id in 573 aa, and to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc2200 or rs01399 SWALL:Q8XXB6 (EMBL:AL646068) (592 aa) fasta scores: E(): 1e-124, 65.23% id in 581 aa; ABC transporter ATP-binding protein 1299323..1301113 Burkholderia pseudomallei K96243 3091747 YP_107740.1 CDS BPSL1119 NC_006350.1 1301167 1302249 D Similar to Neisseria meningitidis LgtG SWALL:AAM33532 (EMBL:AF470675) (351 aa) fasta scores: E(): 2.6e-49, 40.57% id in 350 aa, and to Neisseria gonorrhoeae lipooligosaccharide glycosyl transferase G LgtG SWALL:O85795 (EMBL:AF076919) (351 aa) fasta scores: E(): 1.4e-48, 40.28% id in 350 aa; LPS biosynthesis-like protein 1301167..1302249 Burkholderia pseudomallei K96243 3091748 YP_107741.1 CDS BPSL1120 NC_006350.1 1302531 1303676 D Similar to Streptomyces coelicolor transferase sco6183 or sc2g5.04 SWALL:Q9Z5B9 (EMBL:AL035478) (335 aa) fasta scores: E(): 6.7e-12, 31.41% id in 312 aa, and to Pseudomonas aeruginosa heptosyl transferase I RfaC SWALL:O05195 (EMBL:U70982) (355 aa) fasta scores: E(): 2.8e-10, 28.87% id in 374 aa; transferase 1302531..1303676 Burkholderia pseudomallei K96243 3092407 YP_107742.1 CDS BPSL1121 NC_006350.1 1303673 1304971 D Similar to Anabaena sp. hypothetical protein all5073 SWALL:Q8YM67 (EMBL:AP003598) (475 aa) fasta scores: E(): 7.4e-05, 22.01% id in 418 aa; hypothetical protein 1303673..1304971 Burkholderia pseudomallei K96243 3092408 YP_107743.1 CDS BPSL1122 NC_006350.1 1304968 1306230 D Similar to Bacillus halodurans lipopolysaccharide biosynthesis bh3663 SWALL:Q9K6R4 (EMBL:AP001519) (373 aa) fasta scores: E(): 8.7e-19, 29.17% id in 401 aa, and to Fusobacterium nucleatum glycosyl transferase fn1245 SWALL:Q8R631 (EMBL:AE010630) (381 aa) fasta scores: E(): 2.6e-17, 27.19% id in 364 aa; glycosyl transferase 1304968..1306230 Burkholderia pseudomallei K96243 3094541 YP_107744.1 CDS BPSL1123 NC_006350.1 1306305 1307489 D Similar to Escherichia coli lipopolysaccharide core biosynthesis glycosyl transferase RfaQ or WaaQ or b3632 SWALL:RFAQ_ECOLI (SWALL:P25742) (344 aa) fasta scores: E(): 1.8e-16, 26.62% id in 323 aa, and to Yersinia pestis lipopolysaccharide core biosynthesis protein ypo0416 SWALL:Q8ZIS3 (EMBL:AJ414142) (346 aa) fasta scores: E(): 5.2e-21, 32.66% id in 300 aa; LPS core biosynthesis-like protein 1306305..1307489 Burkholderia pseudomallei K96243 3094542 YP_107745.1 CDS BPSL1123b NC_006350.1 1307464 1307730 R Doubtful CDS. No significant database matches; hypothetical protein complement(1307464..1307730) Burkholderia pseudomallei K96243 3093370 YP_107746.1 CDS BPSL1124 NC_006350.1 1307754 1308518 R Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SWALL:KDTX_SERMA (SWALL:Q54435) (257 aa) fasta scores: E(): 1.8e-33, 41.66% id in 252 aa, and to Ralstonia solanacearum probable glycosyl transferase rsc2202 or rs01397 SWALL:Q8XXB4 (EMBL:AL646068) (256 aa) fasta scores: E(): 1.2e-41, 50.59% id in 251 aa; LPS biosynthesis-like protein complement(1307754..1308518) Burkholderia pseudomallei K96243 3093371 YP_107747.1 CDS BPSL1125 NC_006350.1 1308976 1309356 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0815 or rs05007 SWALL:Q8Y175 (EMBL:AL646061) (132 aa) fasta scores: E(): 1.5e-17, 47.72% id in 132 aa, and to Rhizobium meliloti hypothetical transmembrane signal peptide protein r01916 or smc04246 SWALL:Q92K77 (EMBL:AL591788) (126 aa) fasta scores: E(): 1.1e-05, 36.66% id in 120 aa; hypothetical protein 1308976..1309356 Burkholderia pseudomallei K96243 3093885 YP_107748.1 CDS BPSL1126 NC_006350.1 1309637 1310230 R hypothetical protein complement(1309637..1310230) Burkholderia pseudomallei K96243 3093886 YP_107749.1 CDS BPSL1127 NC_006350.1 1310507 1311775 R Similar to Mycobacterium tuberculosis transmembrane transport protein rv2456c or mtv008.12c or mt2531 SWALL:O53183 (EMBL:AL021246) (418 aa) fasta scores: E(): 6.3e-41, 36.74% id in 411 aa, and to Xanthomonas axonopodis pv. citri str. 306 MFS transporter xac0229 SWALL:AAM35121 (EMBL:AE011647) (409 aa) fasta scores: E(): 2.4e-34, 36.13% id in 393 aa; ABC transporter integral membrane protein complement(1310507..1311775) Burkholderia pseudomallei K96243 3093795 YP_107750.1 CDS BPSL1128 NC_006350.1 1311772 1312755 R lipoprotein complement(1311772..1312755) Burkholderia pseudomallei K96243 3093796 YP_107751.1 CDS BPSL1129 NC_006350.1 1313442 1313894 R Similar to Escherichia coli O157:H7 hypothetical protein z3974 or ecs3535 SWALL:Q8X921 (EMBL:AE005496) (143 aa) fasta scores: E(): 6.1e-23, 48.55% id in 138 aa, and to Pseudomonas aeruginosa hypothetical protein a0269 SWALL:Q9I6M1 (EMBL:AE004465) (145 aa) fasta scores: E(): 4.8e-21, 44.44% id in 135 aa; hypothetical protein complement(1313442..1313894) Burkholderia pseudomallei K96243 3091501 YP_107752.1 CDS BPSL1130 NC_006350.1 1314397 1315290 R Similar to Caulobacter crescentus RNA polymerase sigma factor cc3266 SWALL:Q9A3D8 (EMBL:AE005990) (291 aa) fasta scores: E(): 9.8e-42, 44.84% id in 281 aa, and to Streptomyces coelicolor RNA polymerase sigma factor sco1263 or 2scg18.10C SWALL:Q9K3H7 (EMBL:AL390188) (295 aa) fasta scores: E(): 1.5e-41, 45.93% id in 283 aa; sigma factor complement(1314397..1315290) Burkholderia pseudomallei K96243 3091502 YP_107753.1 CDS BPSL1132 NC_006350.1 1316037 1316330 R Similar to Ralstonia solanacearum hypothetical protein rsc2198 or rs01401 SWALL:Q8XXB8 (EMBL:AL646068) (96 aa) fasta scores: E(): 1.5e-25, 68.04% id in 97 aa; hypothetical protein complement(1316037..1316330) Burkholderia pseudomallei K96243 3094623 YP_107754.1 CDS BPSL1133 NC_006350.1 1317018 1317371 D hypothetical protein 1317018..1317371 Burkholderia pseudomallei K96243 3093356 YP_107755.1 CDS BPSL1134 NC_006350.1 1318558 1319238 D hypothetical protein 1318558..1319238 Burkholderia pseudomallei K96243 3093357 YP_107756.1 CDS BPSL1135 NC_006350.1 1319300 1320697 D hypothetical protein 1319300..1320697 Burkholderia pseudomallei K96243 3092970 YP_107757.1 CDS BPSL1136 NC_006350.1 1320725 1322113 R Similar to Bacillus subtilis uric acid permease PucJ SWALL:PUCJ_BACSU (SWALL:O32139) (449 aa) fasta scores: E(): 2.7e-34, 37.02% id in 424 aa, and to Pseudomonas aeruginosa probable transporter pa0352 SWALL:Q9I6E1 (EMBL:AE004473) (461 aa) fasta scores: E(): 1.1e-134, 82.65% id in 444 aa; hypothetical protein complement(1320725..1322113) Burkholderia pseudomallei K96243 3092971 YP_107758.1 CDS BPSL1137 NC_006350.1 1322871 1323962 D Very low similarity to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related regulatory protein cII SWALL:AAM43407 (EMBL:AE012545) (339 aa) fasta scores: E(): 7.8e-10, 28.01% id in 332 aa; hypothetical protein 1322871..1323962 Burkholderia pseudomallei K96243 3094871 YP_107759.1 CDS BPSL1138 NC_006350.1 1323959 1324657 D Very low similarity to the C-terminal regions of Clostridium perfringens hypothetical protein cpe1605 SWALL:Q8XJZ8 (EMBL:AP003191) (269 aa) fasta scores: E(): 1.6e-15, 32.86% id in 216 aa, and of Bacillus anthracis pxo1-131 SWALL:Q9X388 (EMBL:AF065404) (349 aa) fasta scores: E(): 6.8e-13, 32.67% id in 202 aa; hypothetical protein 1323959..1324657 Burkholderia pseudomallei K96243 3094872 YP_107760.1 CDS BPSL1139 NC_006350.1 1325353 1325670 R hypothetical protein complement(1325353..1325670) Burkholderia pseudomallei K96243 3094458 YP_107761.1 CDS BPSL1140 NC_006350.1 1325660 1326949 R Similar to Escherichia coli O157:H7 portal protein for prophage cp-933v z3328 SWALL:Q8X3L1 (EMBL:AE005441) (861 aa) fasta scores: E(): 1.2e-60, 43.4% id in 417 aa, and to Bacteriophage phiE125 gp4 4 SWALL:Q8W6U7 (EMBL:AF447491) (419 aa) fasta scores: E(): 1.5e-19, 27.34% id in 384 aa; phage-like protein complement(1325660..1326949) Burkholderia pseudomallei K96243 3094459 YP_107762.1 CDS BPSL1141 NC_006350.1 1326949 1327128 R hypothetical protein complement(1326949..1327128) Burkholderia pseudomallei K96243 3093890 YP_107763.1 CDS BPSL1142 NC_006350.1 1327141 1329036 R Similar to Escherichia coli O157:H7 hypothetical protein z1804 SWALL:Q8X3S4 (EMBL:AE005324) (645 aa) fasta scores: E(): 3.9e-63, 42.81% id in 647 aa, and to Bacteriophage phiE125 gp6 6 SWALL:Q8W6U5 (EMBL:AF447491) (435 aa) fasta scores: E(): 3.9e-15, 27.29% id in 447 aa; phage-like protein complement(1327141..1329036) Burkholderia pseudomallei K96243 3093891 YP_107764.1 CDS BPSL1143 NC_006350.1 1329087 1330607 R Similar to Bacteriophage HK97 terminase large subunit 2 SWALL:Q9MCT1 (EMBL:AF069529) (504 aa) fasta scores: E(): 3.5e-82, 46.76% id in 494 aa, and to Escherichia coli O157:H7 terminase large subunit ecs1598 SWALL:Q8X2A3 (EMBL:AP002555) (553 aa) fasta scores: E(): 1e-27, 29.3% id in 488 aa; phage terminase complement(1329087..1330607) Burkholderia pseudomallei K96243 3093495 YP_107765.1 CDS BPSL1144 NC_006350.1 1330589 1331029 R hypothetical protein complement(1330589..1331029) Burkholderia pseudomallei K96243 3093496 YP_107766.1 CDS BPSL1145 NC_006350.1 1331134 1331427 R Similar to Bacteriophage P27 hypothetical 13.0 kDa protein SWALL:Q8W633 (EMBL:AJ298298) (116 aa) fasta scores: E(): 4.5e-10, 53.52% id in 71 aa, and to Haemophilus influenzae phage phi-105 holin-like protein SWALL:Q9L8N1 (EMBL:AF198256) (128 aa) fasta scores: E(): 6.5e-07, 36.17% id in 94 aa; phage-like protein complement(1331134..1331427) Burkholderia pseudomallei K96243 3093546 YP_107767.1 CDS BPSL1146 NC_006350.1 1332197 1332745 R hypothetical protein complement(1332197..1332745) Burkholderia pseudomallei K96243 3093547 YP_107768.1 CDS BPSL1147 NC_006350.1 1332745 1332972 R hypothetical protein complement(1332745..1332972) Burkholderia pseudomallei K96243 3093719 YP_107769.1 CDS BPSL1148 NC_006350.1 1332969 1333262 R hypothetical protein complement(1332969..1333262) Burkholderia pseudomallei K96243 3093720 YP_107770.1 CDS BPSL1149 NC_006350.1 1333198 1333476 R hypothetical protein complement(1333198..1333476) Burkholderia pseudomallei K96243 3094769 YP_107771.1 CDS BPSL1150 NC_006350.1 1333469 1333720 R hypothetical protein complement(1333469..1333720) Burkholderia pseudomallei K96243 3094770 YP_107772.1 CDS BPSL1151 NC_006350.1 1333713 1333895 R Very low similarity in the C-terminal region to Ralstonia solanacearum hypothetical protein rsc2485 or rs01110 SWALL:Q8XWI9 (EMBL:AL646070) (106 aa) fasta scores: E(): 7, 36.5% id in 63 aa; hypothetical protein complement(1333713..1333895) Burkholderia pseudomallei K96243 3094745 YP_107773.1 CDS BPSL1152 NC_006350.1 1333892 1334116 R hypothetical protein complement(1333892..1334116) Burkholderia pseudomallei K96243 3094746 YP_107774.1 CDS BPSL1153 NC_006350.1 1334094 1334297 R hypothetical protein complement(1334094..1334297) Burkholderia pseudomallei K96243 3092503 YP_107775.1 CDS BPSL1153A NC_006350.1 1334456 1334761 R hypothetical protein complement(1334456..1334761) Burkholderia pseudomallei K96243 3092504 YP_107776.1 CDS BPSL1154 NC_006350.1 1334758 1335144 R hypothetical protein complement(1334758..1335144) Burkholderia pseudomallei K96243 3093157 YP_107777.1 CDS BPSL1155 NC_006350.1 1335125 1335355 R Similar to Ralstonia solanacearum hypothetical protein rsc2487 or rs05745 SWALL:Q8XWI7 (EMBL:AL646070) (68 aa) fasta scores: E(): 3.4e-13, 60.6% id in 66 aa; hypothetical protein complement(1335125..1335355) Burkholderia pseudomallei K96243 3093158 YP_107778.1 CDS BPSL1156 NC_006350.1 1335523 1335978 R hypothetical protein complement(1335523..1335978) Burkholderia pseudomallei K96243 3094593 YP_107779.1 CDS BPSL1157 NC_006350.1 1336223 1337464 R Similar to Xanthomonas axonopodis pv. citri str. 306 phage-related integrase IntS SWALL:AAM37139 (EMBL:AE011866) (408 aa) fasta scores: E(): 1.4e-17, 27.46% id in 426 aa, and to Bacteriophage phi-80 Integrase Int SWALL:VINT_BPPH8 (SWALL:P06155) (402 aa) fasta scores: E(): 1.6e-15, 23.07% id in 403 aa; phage integrase complement(1336223..1337464) Burkholderia pseudomallei K96243 3094594 YP_107780.1 CDS cafA NC_006350.1 1337638 1339104 R Similar to Escherichia coli, and Escherichia coli O157:H7 ribonuclease G CafA or Rng or b3247 or z4605 or ecs4119 SWALL:RNG_ECOLI (SWALL:P25537) (488 aa) fasta scores: E(): 7.6e-103, 56.21% id in 491 aa, and to Ralstonia solanacearum probable ribonuclease G rsc2197 or rs01402 SWALL:Q8XXB9 (EMBL:AL646068) (489 aa) fasta scores: E(): 4.7e-152, 81.83% id in 490 aa; ribonuclease G complement(1337638..1339104) Burkholderia pseudomallei K96243 3091771 YP_107781.1 CDS maf NC_006350.1 1339113 1339742 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(1339113..1339742) Burkholderia pseudomallei K96243 3093041 YP_107782.1 CDS BPSL1160 NC_006350.1 1339795 1340265 R SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(1339795..1340265) Burkholderia pseudomallei K96243 3093042 YP_107783.1 CDS BPSL1161 NC_006350.1 1340322 1340786 R Similar to, although shorter in its C-terminal region than, Ralstonia solanacearum hypothetical protein rsc2194 or rs01405 SWALL:Q8XXC1 (EMBL:AL646068) (203 aa) fasta scores: E(): 6.6e-39, 72.43% id in 156 aa, and to, although longer in its C-terminal region than, Escherichia coli hypothetical protein YbeB or b0637 SWALL:YBEB_ECOLI (SWALL:P05848) (105 aa) fasta scores: E(): 1.1e-09, 33.65% id in 104 aa; hypothetical protein complement(1340322..1340786) Burkholderia pseudomallei K96243 3093049 YP_107784.1 CDS BPSL1162 NC_006350.1 1340791 1341543 R catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase complement(1340791..1341543) Burkholderia pseudomallei K96243 3093050 YP_107785.1 CDS hemF NC_006350.1 1341540 1342463 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(1341540..1342463) Burkholderia pseudomallei K96243 3092344 YP_107786.1 CDS purD NC_006350.1 1342594 1343871 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1342594..1343871) Burkholderia pseudomallei K96243 3094818 YP_107787.1 CDS BPSL1165 NC_006350.1 1343982 1344710 R Similar to Ralstonia solanacearum hypothetical protein rsc2190 or rs01409 SWALL:Q8XXC5 (EMBL:AL646068) (241 aa) fasta scores: E(): 3.5e-75, 84.64% id in 241 aa, and to Escherichia coli protein YebC or b1864 SWALL:YEBC_ECOLI (SWALL:P24237) (246 aa) fasta scores: E(): 7.5e-53, 61.57% id in 242 aa; hypothetical protein complement(1343982..1344710) Burkholderia pseudomallei K96243 3093513 YP_107788.1 CDS upp NC_006350.1 1345220 1345870 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(1345220..1345870) Burkholderia pseudomallei K96243 3091557 YP_107789.1 CDS BPSL1167 NC_006350.1 1346128 1346907 D Similar to Xanthomonas axonopodis pv. citri str. 306 oxidoreductase xac0384 SWALL:AAM35276 (EMBL:AE011664) (260 aa) fasta scores: E(): 1.7e-66, 71.53% id in 260 aa, and to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase rsc2186 or rs01413 SWALL:Q8XXC9 (EMBL:AL646068) (263 aa) fasta scores: E(): 3e-61, 67.3% id in 263 aa; dehydrogenase 1346128..1346907 Burkholderia pseudomallei K96243 3093514 YP_107790.1 CDS mgsA NC_006350.1 1347137 1347529 D catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1347137..1347529 Burkholderia pseudomallei K96243 3091721 YP_107791.1 CDS qor NC_006350.1 1348381 1349355 D Similar to Escherichia coli quinone oxidoreductase Qor or Hcz or b4051 SWALL:QOR_ECOLI (SWALL:P28304) (327 aa) fasta scores: E(): 1.6e-53, 47.7% id in 327 aa, and to Ralstonia solanacearum probable NADPH:quinone reductase, zeta-crystallin homolog oxidoreductase rsc2184 or rs01415 SWALL:Q8XXD1 (EMBL:AL646068) (324 aa) fasta scores: E(): 7.2e-86, 70.67% id in 324 aa; quinone oxidoreductase 1348381..1349355 Burkholderia pseudomallei K96243 3092044 YP_107792.1 CDS BPSL1170 NC_006350.1 1349820 1349912 D Similar to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc0701 SWALL:AAM40017 (EMBL:AE012169) (30 aa) fasta scores: E(): 0.11, 44.44% id in 27 aa, and to Escherichia coli protein KdpF or b0698.1 SWALL:KDPF_ECOLI (SWALL:P36937) (29 aa) fasta scores: E(): 4.4, 73.33% id in 15 aa; hypothetical protein 1349820..1349912 Burkholderia pseudomallei K96243 3093535 YP_107793.1 CDS kdpA NC_006350.1 1349909 1351717 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1349909..1351717 Burkholderia pseudomallei K96243 3091706 YP_107794.1 CDS kdpB NC_006350.1 1351813 1353873 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1351813..1353873 Burkholderia pseudomallei K96243 3092345 YP_107795.1 CDS kdpC NC_006350.1 1353886 1354467 D One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 1353886..1354467 Burkholderia pseudomallei K96243 3092346 YP_107796.1 CDS kdpD NC_006350.1 1354752 1357733 D Similar to Escherichia coli sensor protein KdpD or b0695 SWALL:KDPD_ECOLI (SWALL:P21865) (894 aa) fasta scores: E(): 8.8e-93, 49.39% id in 913 aa, and to Salmonella typhi sensor protein sty0744 SWALL:Q8Z8E7 (EMBL:AL627267) (902 aa) fasta scores: E(): 3.5e-97, 48.91% id in 924 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; two-component system, sensor kinase KdpD 1354752..1357733 Burkholderia pseudomallei K96243 3094181 YP_107797.1 CDS kdpE NC_006350.1 1357726 1358424 D Similar to Escherichia coli kdp operon transcriptional regulatory protein KdpE or b0694 SWALL:KDPE_ECOLI (SWALL:P21866) (225 aa) fasta scores: E(): 3.6e-56, 65.31% id in 222 aa, and to Salmonella typhimurium response regulator in two-component regulatory system with KdpD, regulates kdp operon encoding a high-affinity K translocating ATPase stm0702 SWALL:Q8ZQW5 (EMBL:AE008728) (225 aa) fasta scores: E(): 2.8e-55, 63.51% id in 222 aa; two-component system, regulatory protein KdpE 1357726..1358424 Burkholderia pseudomallei K96243 3094182 YP_107798.1 CDS BPSL1176 NC_006350.1 1358812 1359108 D Similar to Rhizobium loti hypothetical protein msl2463 SWALL:Q98IC7 (EMBL:AP002999) (89 aa) fasta scores: E(): 1.5e-07, 40.22% id in 87 aa; hypothetical protein 1358812..1359108 Burkholderia pseudomallei K96243 3093536 YP_107799.1 CDS sugE NC_006350.1 1359324 1359644 D Similar to Escherichia coli SugE protein or b4148 SWALL:SUGE_ECOLI (SWALL:P30743) (105 aa) fasta scores: E(): 5e-20, 61.53% id in 104 aa, and to Yersinia pestis chaperone ypo0355 SWALL:Q8ZIX9 (EMBL:AJ414142) (104 aa) fasta scores: E(): 1.3e-20, 63.46% id in 104 aa; chaperone 1359324..1359644 Burkholderia pseudomallei K96243 3092893 YP_107800.1 CDS BPSL1178 NC_006350.1 1359836 1360453 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2467 or rs01138 SWALL:Q8XWK7 (EMBL:AL646070) (206 aa) fasta scores: E(): 7.7e-39, 60.98% id in 182 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc0485 SWALL:AAM39801 (EMBL:AE012145) (208 aa) fasta scores: E(): 3.8e-24, 48.88% id in 180 aa; hypothetical protein 1359836..1360453 Burkholderia pseudomallei K96243 3094526 YP_107801.1 CDS BPSL1179 NC_006350.1 1360450 1363092 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2091 or rs03656 SWALL:Q8XXM2 (EMBL:AL646068) (843 aa) fasta scores: E(): 1.3e-140, 54.94% id in 859 aa, and to Escherichia coli hypothetical protein YbbP or b0496 SWALL:YBBP_ECOLI (SWALL:P77504) (804 aa) fasta scores: E(): 1.4e-29, 32.15% id in 852 aa; hypothetical protein 1360450..1363092 Burkholderia pseudomallei K96243 3094527 YP_107802.1 CDS BPSL1180 NC_006350.1 1363156 1363602 D Identical to the C-terminal region of the previously sequenced Burkholderia pseudomallei globin SWALL:Q93SP0 (EMBL:AY030274) (170 aa) fasta scores: E(): 1.3e-64, 99.32% id in 148 aa, and to Ralstonia solanacearum oxygen-binding protein rsc2090 or rs03655 SWALL:Q8XXM3 (EMBL:AL646068) (134 aa) fasta scores: E(): 1.1e-41, 74.43% id in 133 aa, and to Mycobacterium tuberculosis, and Mycobacterium bovis hemoglobin-like protein hbo GlbO or rv2470 or mt2546 or mtv008.26 SWALL:GLBO_MYCTU (SWALL:O53197) (128 aa) fasta scores: E(): 1.5e-10, 37.2% id in 129 aa. Note: The N-terminal region of the previously sequenced database match (SWALL:Q93SP0) does not coincide with the one in BPSL1180, being the first one longer than this CDS. Also this CDS is longer in its N-terminal region than most of its database matches; globin 1363156..1363602 Burkholderia pseudomallei K96243 3093896 YP_107803.1 CDS BPSL1181 NC_006350.1 1363713 1364444 D Similar to Rhizobium loti alanyl-tRNA synthetase mlr0354 SWALL:Q98N10 (EMBL:AP002994) (248 aa) fasta scores: E(): 5e-35, 47.71% id in 241 aa, and to parts of Escherichia coli alanyl-tRNA synthetase AlaS or LovB or b2697 SWALL:SYA_ECOLI (SWALL:P00957) (876 aa) fasta scores: E(): 5.5e-08, 34.61% id in 234 aa; alanyl-tRNA synthetase 1363713..1364444 Burkholderia pseudomallei K96243 3093897 YP_107804.1 CDS BPSL1182 NC_006350.1 1364441 1365082 D Similar to Ralstonia solanacearum transmembrane protein rsc2089 or rs03654 SWALL:Q8XXM4 (EMBL:AL646068) (192 aa) fasta scores: E(): 1e-31, 53.15% id in 190 aa, and to Brucella melitensis hypothetical protein bmei0803 SWALL:Q8YHJ5 (EMBL:AE009522) (208 aa) fasta scores: E(): 2.3e-22, 38.61% id in 202 aa. Note: Has a posibble alternative start codon at residue 28; hypothetical protein 1364441..1365082 Burkholderia pseudomallei K96243 3094687 YP_107805.1 CDS BPSL1183 NC_006350.1 1365426 1366820 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1365426..1366820 Burkholderia pseudomallei K96243 3094688 YP_107806.1 CDS BPSL1184 NC_006350.1 1367068 1368384 D Similar to Pseudomonas aeruginosa probable MFS transporter pa0703 SWALL:Q9I5M3 (EMBL:AE004506) (438 aa) fasta scores: E(): 3.5e-108, 69.92% id in 419 aa, and to Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 4.3e-48, 36.79% id in 405 aa; sugar-related transport, membrane protein 1367068..1368384 Burkholderia pseudomallei K96243 3092922 YP_107807.1 CDS BPSL1185 NC_006350.1 1368695 1370602 R Similar to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1181 or rs05713 SWALL:Q8Y063 (EMBL:AL646063) (598 aa) fasta scores: E(): 1.1e-27, 26.4% id in 625 aa, and to Neisseria meningitidis hypothetical protein nmb1954 SWALL:Q9JXN7 (EMBL:AE002543) (553 aa) fasta scores: E(): 0.0026, 27.36% id in 570 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein complement(1368695..1370602) Burkholderia pseudomallei K96243 3092923 YP_107808.1 CDS BPSL1186 NC_006350.1 1371117 1371932 R Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase complement(1371117..1371932) Burkholderia pseudomallei K96243 3093594 YP_107809.1 CDS BPSL1187 NC_006350.1 1372307 1372894 R Similar to Pseudomonas aeruginosa hypothetical protein pa4923 SWALL:YDC3_PSEAE (SWALL:P48636) (195 aa) fasta scores: E(): 2.6e-39, 56.68% id in 187 aa, and to Rhodococcus fascians hypothetical 21.1 kDa protein in fasciation locus Fas6 SWALL:FAS6_RHOFA (SWALL:P46378) (198 aa) fasta scores: E(): 2.1e-28, 53.89% id in 154 aa. Note: This CDS is shorter in its N-terminal region than some of its database matches; decarboxylase complement(1372307..1372894) Burkholderia pseudomallei K96243 3093595 YP_107810.1 CDS BPSL1188 NC_006350.1 1372891 1373610 R Similar to Ralstonia solanacearum transcription regulator protein rsc2086 or rs03651 SWALL:Q8XXM7 (EMBL:AL646068) (231 aa) fasta scores: E(): 3.1e-60, 65.45% id in 220 aa, and to Alcanivorax borkumensis PhaD SWALL:Q9F9H1 (EMBL:AF193866) (233 aa) fasta scores: E(): 4.6e-17, 33.03% id in 221 aa; TetR family transcriptional regulator complement(1372891..1373610) Burkholderia pseudomallei K96243 3092213 YP_107811.1 CDS BPSL1189 NC_006350.1 1373847 1374317 R Similar to Escherichia coli, and Escherichia coli O157:H7 diacylglycerol kinase DgkA or b4042 or z5641 or ecs5025 SWALL:KDGL_ECOLI (SWALL:P00556) (121 aa) fasta scores: E(): 3.7e-13, 45.94% id in 111 aa, and to Ralstonia solanacearum probable diacylglycerol kinase transmembrane protein rsc2085 or rs03650 SWALL:Q8XXM8 (EMBL:AL646068) (153 aa) fasta scores: E(): 1.2e-26, 56.29% id in 151 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; kinase complement(1373847..1374317) Burkholderia pseudomallei K96243 3092214 YP_107812.1 CDS BPSL1190 NC_006350.1 1374401 1375435 R Similar to Ralstonia solanacearum hypothetical protein rsc2084 or rs03649 SWALL:Q8XXM9 (EMBL:AL646068) (356 aa) fasta scores: E(): 1.2e-103, 76.47% id in 340 aa, and to Agrobacterium tumefaciens glycosyltransferase atu2297 or agr_c_4173 SWALL:Q8UD31 (EMBL:AE009179) (363 aa) fasta scores: E(): 1.9e-67, 53.37% id in 326 aa; glycosyltransferase complement(1374401..1375435) Burkholderia pseudomallei K96243 3093908 YP_107813.1 CDS BPSL1191 NC_006350.1 1375457 1376395 R Similar to Ralstonia solanacearum hypothetical protein rsc2083 or rs03648 SWALL:Q8XXN0 (EMBL:AL646068) (314 aa) fasta scores: E(): 5.4e-89, 70.45% id in 308 aa, and to Caulobacter crescentus hypothetical protein cc3344 SWALL:Q9A362 (EMBL:AE005996) (281 aa) fasta scores: E(): 1.3e-66, 61.06% id in 262 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein complement(1375457..1376395) Burkholderia pseudomallei K96243 3093909 YP_107814.1 CDS BPSL1192 NC_006350.1 1376486 1376953 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2081 or rs03646 SWALL:Q8XXN2 (EMBL:AL646068) (176 aa) fasta scores: E(): 2.6e-19, 46.75% id in 154 aa, and to Neisseria meningitidis hypothetical protein nmb0710 SWALL:Q9K0A5 (EMBL:AE002425) (188 aa) fasta scores: E(): 2.3e-08, 35.18% id in 162 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; hypothetical protein complement(1376486..1376953) Burkholderia pseudomallei K96243 3093309 YP_107815.1 CDS BPSL1193 NC_006350.1 1377002 1377757 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2080 or rs03645 SWALL:Q8XXN3 (EMBL:AL646068) (283 aa) fasta scores: E(): 9.2e-19, 39.68% id in 257 aa. Note: This CDS is shorter in its N-terminal region than the database match; hypothetical protein complement(1377002..1377757) Burkholderia pseudomallei K96243 3093310 YP_107816.1 CDS BPSL1194 NC_006350.1 1377788 1378210 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2079 or rs03644 SWALL:Q8XXN4 (EMBL:AL646068) (146 aa) fasta scores: E(): 2.5e-16, 50% id in 140 aa; hypothetical protein complement(1377788..1378210) Burkholderia pseudomallei K96243 3093317 YP_107817.1 CDS BPSL1195 NC_006350.1 1378207 1378767 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(1378207..1378767) Burkholderia pseudomallei K96243 3093318 YP_107818.1 CDS ilvI NC_006350.1 1379163 1380926 D acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit 1379163..1380926 Burkholderia pseudomallei K96243 3093947 YP_107819.1 CDS ilvH NC_006350.1 1381038 1381529 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1381038..1381529 Burkholderia pseudomallei K96243 3094328 YP_107820.1 CDS ilvC NC_006350.1 1381612 1382628 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1381612..1382628 Burkholderia pseudomallei K96243 3092052 YP_107821.1 CDS BPSL1199 NC_006350.1 1382750 1383400 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1382750..1383400 Burkholderia pseudomallei K96243 3093663 YP_107822.1 CDS BPSL1200 NC_006350.1 1383417 1384289 D Similar to Ralstonia solanacearum CDP-diacylglycerol--serine O-phosphatidyltransferase PssA or rsc2073 or rs03638 SWALL:Q8XXP0 (EMBL:AL646068) (291 aa) fasta scores: E(): 3.3e-79, 71.67% id in 286 aa, and to Helicobacter pylori CDP-diacylglycerol--serine O-phosphatidyltransferase PssA or Ptr or hp1071 SWALL:PSS_HELPY (SWALL:Q48269) (237 aa) fasta scores: E(): 2.9e-23, 35.14% id in 239 aa; phosphatidyltransferase 1383417..1384289 Burkholderia pseudomallei K96243 3093664 YP_107823.1 CDS leuA NC_006350.1 1384648 1386195 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1384648..1386195 Burkholderia pseudomallei K96243 3091966 YP_107824.1 CDS BPSL1202 NC_006350.1 1386330 1387877 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp0113 or rs03009 SWALL:Q8XTJ5 (EMBL:AL646076) (520 aa) fasta scores: E(): 2.4e-111, 65.7% id in 487 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 sulfate transporter YchM SWALL:AAM40826 (EMBL:AE012254) (519 aa) fasta scores: E(): 3.5e-43, 35.16% id in 529 aa; transport-related membrane protein complement(1386330..1387877) Burkholderia pseudomallei K96243 3093654 YP_107825.1 CDS BPSL1203 NC_006350.1 1387935 1388570 R Similar to Escherichia coli, and Escherichia coli O157:H7 carbonic anhydrase CynT or b0339 or z0435 or ecs0392 SWALL:CYNT_ECOLI (SWALL:P17582) (219 aa) fasta scores: E(): 6e-14, 31.25% id in 192 aa, and to Ralstonia solanacearum carbonic anhydrase rsp0112 or rs03010 SWALL:Q8XTJ6 (EMBL:AL646076) (214 aa) fasta scores: E(): 9.9e-56, 68.39% id in 212 aa; carbonic anhydrase complement(1387935..1388570) Burkholderia pseudomallei K96243 3093655 YP_107826.1 CDS BPSL1204 NC_006350.1 1389014 1389514 R Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1480 or rs03826 SWALL:Q8XZC1 (EMBL:AL646064) (177 aa) fasta scores: E(): 7.6e-32, 54.32% id in 162 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2071 or rs03636 SWALL:Q8XXP2 (EMBL:AL646068) (173 aa) fasta scores: E(): 6.8e-26, 48.07% id in 156 aa; lipoprotein complement(1389014..1389514) Burkholderia pseudomallei K96243 3092299 YP_107827.1 CDS BPSL1205 NC_006350.1 1389893 1391170 D Similar to Ralstonia solanacearum probable transporter signal peptide protein rsc2070 or rs03635 SWALL:Q8XXP3 (EMBL:AL646068) (418 aa) fasta scores: E(): 4.2e-94, 62.2% id in 418 aa, and to Brucella melitensis leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor bmeii0069 SWALL:Q8YDV5 (EMBL:AE009645) (228 aa) fasta scores: E(): 6.7e-14, 30.97% id in 226 aa; amino acid transport system, exported protein 1389893..1391170 Burkholderia pseudomallei K96243 3092300 YP_107828.1 CDS rpsO NC_006350.1 1391276 1391545 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1391276..1391545 Burkholderia pseudomallei K96243 3093559 YP_107829.1 CDS pnp NC_006350.1 1391849 1393990 D Similar to Escherichia coli polyribonucleotide nucleotidyltransferase Pnp or b3164 SWALL:PNP_ECOLI (SWALL:P05055) (711 aa) fasta scores: E(): 4.3e-169, 64.18% id in 712 aa, and to Ralstonia solanacearum probable polyribonucleotide nucleotidyltransferase rsc2067 or rs03632 SWALL:Q8XXP6 (EMBL:AL646068) (717 aa) fasta scores: E(): 3.6e-213, 81.12% id in 710 aa; polynucleotide phosphorylase 1391849..1393990 Burkholderia pseudomallei K96243 3092633 YP_107830.1 CDS BPSL1208 NC_006350.1 1394106 1395125 D Similar to Ralstonia solanacearum NADPH quinone oxidoreductase rsc2065 or rs03630 SWALL:Q8XXP8 (EMBL:AL646068) (334 aa) fasta scores: E(): 2e-88, 70.83% id in 336 aa, and to Rhizobium meliloti oxidoreductase r00953 or smc00034 SWALL:Q92RD5 (EMBL:AL591785) (327 aa) fasta scores: E(): 7.1e-48, 54.59% id in 337 aa; oxidoreductase 1394106..1395125 Burkholderia pseudomallei K96243 3091522 YP_107831.1 CDS tpiA NC_006350.1 1395230 1395985 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1395230..1395985 Burkholderia pseudomallei K96243 3092857 YP_107832.1 CDS secG NC_006350.1 1396065 1396442 D Similar to Escherichia coli, and Escherichia coli O157:H7 protein-export membrane protein SecG or b3175 or z4537 or ecs4054 SWALL:SECG_ECOLI (SWALL:P33582) (110 aa) fasta scores: E(): 6.1e-10, 43.59% id in 117 aa, and to Ralstonia solanacearum -export membrane protein rsc2063 or rs03461 SWALL:Q8XXQ0 (EMBL:AL646068) (115 aa) fasta scores: E(): 2.2e-20, 76.78% id in 112 aa; preprotein translocase subunit SecG 1396065..1396442 Burkholderia pseudomallei K96243 3093077 YP_107833.1 CDS nuoA NC_006350.1 1396791 1397150 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1396791..1397150 Burkholderia pseudomallei K96243 3094307 YP_107834.1 CDS nuoB NC_006350.1 1397171 1397692 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1397171..1397692 Burkholderia pseudomallei K96243 3094308 YP_107835.1 CDS nuoC NC_006350.1 1397713 1398315 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1397713..1398315 Burkholderia pseudomallei K96243 3092227 YP_107836.1 CDS nuoD NC_006350.1 1398326 1399579 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1398326..1399579 Burkholderia pseudomallei K96243 3094788 YP_107837.1 CDS BPSL1215 NC_006350.1 1399748 1400233 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1399748..1400233 Burkholderia pseudomallei K96243 3091523 YP_107838.1 CDS nuoF NC_006350.1 1400230 1401540 D Similar to Rhodobacter capsulatus NADH dehydrogenase I chain F NuoF SWALL:NUOF_RHOCA (SWALL:O07948) (431 aa) fasta scores: E(): 1.3e-77, 48.4% id in 440 aa, and to Ralstonia solanacearum probable NADH dehydrogenase I chain F rsc2057 or rs03622 SWALL:Q8XXQ6 (EMBL:AL646068) (431 aa) fasta scores: E(): 1.4e-159, 88.75% id in 427 aa; NADH dehydrogenase I chain F 1400230..1401540 Burkholderia pseudomallei K96243 3094789 YP_107839.1 CDS BPSL1217 NC_006350.1 1401623 1403953 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1401623..1403953 Burkholderia pseudomallei K96243 3091552 YP_107840.1 CDS nuoH NC_006350.1 1403954 1405018 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1403954..1405018 Burkholderia pseudomallei K96243 3091497 YP_107841.1 CDS BPSL1219 NC_006350.1 1405034 1405522 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1405034..1405522 Burkholderia pseudomallei K96243 3091553 YP_107842.1 CDS nuoJ NC_006350.1 1405632 1406288 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1405632..1406288 Burkholderia pseudomallei K96243 3091498 YP_107843.1 CDS nuoK NC_006350.1 1406307 1406612 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1406307..1406612 Burkholderia pseudomallei K96243 3092686 YP_107844.1 CDS nuoL NC_006350.1 1406630 1408669 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1406630..1408669 Burkholderia pseudomallei K96243 3091592 YP_107845.1 CDS nuoM NC_006350.1 1408685 1410175 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1408685..1410175 Burkholderia pseudomallei K96243 3091593 YP_107846.1 CDS nuoN NC_006350.1 1410200 1411672 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1410200..1411672 Burkholderia pseudomallei K96243 3093346 YP_107847.1 CDS BPSL1225 NC_006350.1 1411672 1411977 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2048 or rs03613 SWALL:Q8XXR5 (EMBL:AL646068) (102 aa) fasta scores: E(): 2.5e-17, 53% id in 100 aa; hypothetical protein 1411672..1411977 Burkholderia pseudomallei K96243 3092106 YP_107848.1 CDS BPSL1226 NC_006350.1 1412014 1412604 D Similar to Ralstonia solanacearum hypothetical protein rsc2047 or rs03612 SWALL:Q8XXR6 (EMBL:AL646068) (205 aa) fasta scores: E(): 2.2e-51, 69.73% id in 185 aa, and to Bacillus subtilis ADP-ribose pyrophosphatase NudF SWALL:ADPP_BACSU (SWALL:P54570) (185 aa) fasta scores: E(): 9.8e-20, 36.78% id in 174 aa; hypothetical protein 1412014..1412604 Burkholderia pseudomallei K96243 3092107 YP_107849.1 CDS BPSL1227 NC_006350.1 1412756 1413178 D Similar to Agrobacterium tumefaciens hypothetical protein atu3509 or agr_l_2637 SWALL:Q8UA65 (EMBL:AE009281) (142 aa) fasta scores: E(): 3.1e-16, 42.74% id in 131 aa, and to Rhizobium meliloti hypothetical protein r02616 or smc02441 SWALL:Q92MK0 (EMBL:AL591791) (142 aa) fasta scores: E(): 9.8e-16, 44.85% id in 136 aa; hypothetical protein 1412756..1413178 Burkholderia pseudomallei K96243 3092015 YP_107850.1 CDS BPSL1228 NC_006350.1 1413239 1414435 D Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc2045 or rs03610 SWALL:Q8XXR8 (EMBL:AL646068) (398 aa) fasta scores: E(): 1.8e-135, 78.39% id in 398 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase cc1310 SWALL:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 1.5e-97, 60.24% id in 405 aa. Note: Also similar to BPSL0420 (403 aa) fasta scores: E(): 5.3e-88, 58.209% identity in 402 aa overlap; acyl-CoA dehydrogenase 1413239..1414435 Burkholderia pseudomallei K96243 3092016 YP_107851.1 CDS BPSL1229 NC_006350.1 1414447 1415580 D Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc2044 or rs03609 SWALL:Q8XXR9 (EMBL:AL646068) (376 aa) fasta scores: E(): 4.4e-80, 60.63% id in 376 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase cc1311 SWALL:Q9A8P2 (EMBL:AE005806) (401 aa) fasta scores: E(): 3.4e-52, 43.5% id in 377 aa; acyl-CoA dehydrogenase 1414447..1415580 Burkholderia pseudomallei K96243 3091524 YP_107852.1 CDS BPSL1230 NC_006350.1 1415621 1416079 D Similar to Ralstonia solanacearum hypothetical protein rsc2043 or rs03608 SWALL:Q8XXS0 (EMBL:AL646068) (156 aa) fasta scores: E(): 2.3e-27, 48.59% id in 142 aa, and to Agrobacterium tumefaciens hypothetical protein atu2234 or agr_c_4066 SWALL:Q8UD93 (EMBL:AE009173) (169 aa) fasta scores: E(): 7.1e-20, 41.42% id in 140 aa; hypothetical protein 1415621..1416079 Burkholderia pseudomallei K96243 3091525 YP_107853.1 CDS BPSL1231 NC_006350.1 1416076 1416558 D Similar to Streptomyces coelicolor hypothetical protein sco1698 or sci30a.19 SWALL:Q9S254 (EMBL:AL096811) (153 aa) fasta scores: E(): 3.7e-27, 52.63% id in 152 aa, and to Ralstonia solanacearum hypothetical protein rsc2042 or rs03607 SWALL:Q8XXS1 (EMBL:AL646068) (162 aa) fasta scores: E(): 3.7e-23, 52.79% id in 161 aa; hypothetical protein 1416076..1416558 Burkholderia pseudomallei K96243 3091610 YP_107854.1 CDS BPSL1233 NC_006350.1 1416651 1417913 D lipoprotein 1416651..1417913 Burkholderia pseudomallei K96243 3091611 YP_107855.1 CDS BPSL1234 NC_006350.1 1418190 1419416 R Similar to Ralstonia solanacearum probable acyl-CoA dehydrogenase oxidoreductase rsc2020 or rs03588 SWALL:Q8XXU3 (EMBL:AL646067) (420 aa) fasta scores: E(): 4.7e-135, 78.48% id in 409 aa, and to Deinococcus radiodurans acyl-CoA dehydrogenase, dra0196 SWALL:Q9RYW0 (EMBL:AE001862) (415 aa) fasta scores: E(): 1.7e-111, 67.98% id in 406 aa; acyl-CoA dehydrogenase complement(1418190..1419416) Burkholderia pseudomallei K96243 3093348 YP_107856.1 CDS BPSL1235 NC_006350.1 1419460 1420566 R Similar to Ralstonia solanacearum hypothetical protein rsc2016 or rs03584 SWALL:Q8XXU7 (EMBL:AL646067) (358 aa) fasta scores: E(): 2e-103, 72.9% id in 358 aa, and to Rhizobium loti hypothetical protein mlr3099 SWALL:Q98GZ9 (EMBL:AP003001) (344 aa) fasta scores: E(): 2.1e-63, 51.89% id in 343 aa; phosphotransferase complement(1419460..1420566) Burkholderia pseudomallei K96243 3093349 YP_107857.1 CDS BPSL1236 NC_006350.1 1420594 1421307 R Similar to Ralstonia solanacearum phosphoglycerate mutase rsc2015 or rs03583 SWALL:Q8XXU8 (EMBL:AL646067) (244 aa) fasta scores: E(): 8e-50, 59.32% id in 236 aa, and to the N-terminal region of Escherichia coli, and Escherichia coli O157:H7 probable phosphoglycerate mutase 2 GpmB or b4395 or z5997 or ecs5353 SWALL:PMG2_ECOLI (SWALL:P36942) (215 aa) fasta scores: E(): 0.00031, 30.58% id in 170 aa; phosphoglycerate mutase complement(1420594..1421307) Burkholderia pseudomallei K96243 3093129 YP_107858.1 CDS BPSL1237 NC_006350.1 1421317 1422180 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1421317..1422180) Burkholderia pseudomallei K96243 3093130 YP_107859.1 CDS BPSL1238 NC_006350.1 1422330 1423004 D Similar to Ralstonia solanacearum probable GST-related protein rsc2012 or rs03580 SWALL:Q8XXV1 (EMBL:AL646067) (218 aa) fasta scores: E(): 7.8e-36, 50.71% id in 209 aa, and to Arabidopsis thaliana glutathione S-transferase 6 Gst6 or at2g47730 or f17a22.12 SWALL:GTH6_ARATH (SWALL:Q96266) (215 aa) fasta scores: E(): 3.3e-07, 27.67% id in 224 aa; glutathione S-transferase-like protein 1422330..1423004 Burkholderia pseudomallei K96243 3093261 YP_107860.1 CDS BPSL1239 NC_006350.1 1423224 1424378 R catalyzes the transfer of an amino moiety; aminotransferase complement(1423224..1424378) Burkholderia pseudomallei K96243 3093262 YP_107861.1 CDS BPSL1240 NC_006350.1 1424445 1425113 R Similar to parts of Ralstonia solanacearum hypothetical protein rsc2010 or rs03578 SWALL:Q8XXV3 (EMBL:AL646067) (161 aa) fasta scores: E(): 8.7e-10, 37.91% id in 211 aa; hypothetical protein complement(1424445..1425113) Burkholderia pseudomallei K96243 3094810 YP_107862.1 CDS BPSL1241 NC_006350.1 1425171 1425953 D Similar to Ralstonia solanacearum hypothetical protein rsc2009 or rs03577 SWALL:Q8XXV4 (EMBL:AL646067) (257 aa) fasta scores: E(): 9.5e-66, 67.82% id in 258 aa, and to Escherichia coli protein YaaA or b0006 SWALL:YAAA_ECOLI (SWALL:P11288) (258 aa) fasta scores: E(): 3.3e-56, 56.25% id in 256 aa; hypothetical protein 1425171..1425953 Burkholderia pseudomallei K96243 3094811 YP_107863.1 CDS BPSL1242 NC_006350.1 1426012 1427166 D Similar to Ralstonia solanacearum hypothetical protein rsc2008 or rs03576 SWALL:Q8XXV5 (EMBL:AL646067) (381 aa) fasta scores: E(): 3.2e-102, 65.42% id in 376 aa, and to Neisseria meningitidis hypothetical protein nmb1073 SWALL:Q9JZF8 (EMBL:AE002458) (376 aa) fasta scores: E(): 3.8e-82, 55.46% id in 375 aa; peptidase 1426012..1427166 Burkholderia pseudomallei K96243 3091880 YP_107864.1 CDS BPSL1243 NC_006350.1 1427377 1428036 R Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc2007 or rs03575 SWALL:Q8XXV6 (EMBL:AL646067) (251 aa) fasta scores: E(): 6e-13, 34.85% id in 175 aa; hypothetical protein complement(1427377..1428036) Burkholderia pseudomallei K96243 3091881 YP_107865.1 CDS BPSL1244 NC_006350.1 1428157 1428831 R Low similarity to Pseudomonas aeruginosa hypothetical protein pa4532 SWALL:Q9HVP5 (EMBL:AE004867) (229 aa) fasta scores: E(): 1.4e-09, 27.96% id in 211 aa, and to Vibrio cholerae hypothetical protein vc1870 SWALL:Q9KQX7 (EMBL:AE004263) (220 aa) fasta scores: E(): 3.7e-07, 25.52% id in 192 aa; hypothetical protein complement(1428157..1428831) Burkholderia pseudomallei K96243 3093058 YP_107866.1 CDS BPSL1245 NC_006350.1 1428898 1429806 R Similar to Azospirillum brasilense FlcA SWALL:O05210 (EMBL:Y12363) (215 aa) fasta scores: E(): 3.4e-11, 31.19% id in 218 aa, and to Bacillus brevis transcriptional regulatory protein DegU SWALL:DEGU_BACBR (SWALL:P54662) (236 aa) fasta scores: E(): 8.4e-08, 25.11% id in 227 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; transcriptional regulator complement(1428898..1429806) Burkholderia pseudomallei K96243 3093059 YP_107867.1 CDS BPSL1246 NC_006350.1 1429940 1431157 R Similar to Ralstonia solanacearum hypothetical protein rsc2005 or rs03573 SWALL:Q8XXV8 (EMBL:AL646067) (403 aa) fasta scores: E(): 1.2e-83, 52.97% id in 404 aa; hypothetical protein complement(1429940..1431157) Burkholderia pseudomallei K96243 3092146 YP_107868.1 CDS BPSL1247 NC_006350.1 1437846 1439735 D Similar to Sus scrofa Xaa-Pro aminopeptidase precursor SWALL:Q95333 (EMBL:U55039) (673 aa) fasta scores: E(): 1.9e-26, 27.72% id in 642 aa, and to Agrobacterium tumefaciens aminopeptidase P atu2070 or agr_c_3749 SWALL:Q8UDQ1 (EMBL:AE009158) (613 aa) fasta scores: E(): 4.8e-26, 30.4% id in 615 aa. Note: Many of the database matches belong to eukaryotic proteins; peptidase 1437846..1439735 Burkholderia pseudomallei K96243 3092147 YP_107869.1 CDS BPSL1248 NC_006350.1 1439881 1440954 R hypothetical protein complement(1439881..1440954) Burkholderia pseudomallei K96243 3094747 YP_107870.1 CDS BPSL1249 NC_006350.1 1441141 1442184 D Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 7.8e-32, 33.53% id in 331 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.4e-28, 32.22% id in 332 aa; AraC family transcriptional regulator 1441141..1442184 Burkholderia pseudomallei K96243 3094748 YP_107871.1 CDS serA NC_006350.1 1442504 1443778 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1442504..1443778 Burkholderia pseudomallei K96243 3093522 YP_107872.1 CDS BPSL1251 NC_006350.1 1444338 1444802 D Similar to Streptomyces coelicolor transposase sc6g9.36c or scf12.06 or sc5e9.06C SWALL:Q9XAE6 (EMBL:AL079356) (136 aa) fasta scores: E(): 2.4e-07, 45.12% id in 82 aa, and to Ralstonia solanacearum probable TIS1421-transposase OrfA protein SWALL:Q8XGS3 (EMBL:AL646082) (134 aa) fasta scores: E(): 3.2e-07, 36.5% id in 126 aa; transposase 1444338..1444802 Burkholderia pseudomallei K96243 3092660 YP_107873.1 CDS BPSL1252 NC_006350.1 1445222 1446247 R Similar to Pseudomonas aeruginosa hypothetical protein Pa3445 pa3445 SWALL:Q9HYG1 (EMBL:AE004765) (323 aa) fasta scores: E(): 6.2e-65, 58.57% id in 309 aa, and to Escherichia coli aliphatic sulfonates binding protein precursor SsuA or b0936 SWALL:SSUA_ECOLI (SWALL:P75853) (319 aa) fasta scores: E(): 4e-43, 43.23% id in 303 aa; hypothetical protein complement(1445222..1446247) Burkholderia pseudomallei K96243 3092661 YP_107874.1 CDS BPSL1253 NC_006350.1 1447136 1448863 D N-terminal region similar to Ralstonia solanacearum probable transmembrane protein rsp0132 or rs02988 SWALL:Q8XTH8 (EMBL:AL646076) (478 aa) fasta scores: E(): 1.6e-45, 48.28% id in 292 aa, and C-terminal region similar to Erwinia amylovora sensor kinase HrpX SWALL:Q9X3S8 (EMBL:AF083877) (494 aa) fasta scores: E(): 6.6e-24, 41.35% id in 237 aa; integral membrane protein/sensor kinase 1447136..1448863 Burkholderia pseudomallei K96243 3094220 YP_107875.1 CDS BPSL1254 NC_006350.1 1449388 1450464 D hypothetical protein 1449388..1450464 Burkholderia pseudomallei K96243 3094221 YP_107876.1 CDS BPSL1255 NC_006350.1 1450504 1450650 D hypothetical protein 1450504..1450650 Burkholderia pseudomallei K96243 3093738 YP_107877.1 CDS BPSL1256 NC_006350.1 1450878 1451594 D Similar to Pseudomonas aeruginosa probable cytochrome c pa2482 SWALL:Q9I100 (EMBL:AE004676) (217 aa) fasta scores: E(): 1e-14, 32.71% id in 214 aa, and to Ralstonia solanacearum cytochrome c signal peptide protein rsc0197 or rs00629 SWALL:Q8Y2Y4 (EMBL:AL646058) (206 aa) fasta scores: E(): 3.4e-14, 34.8% id in 204 aa; cytochrome c 1450878..1451594 Burkholderia pseudomallei K96243 3093739 YP_107878.1 CDS BPSL1257 NC_006350.1 1451594 1452886 D Similar to Pseudomonas aeruginosa probable cytochrome c pa4571 SWALL:Q9HVL3 (EMBL:AE004870) (675 aa) fasta scores: E(): 3.5e-49, 38.16% id in 414 aa, and to Gluconobacter oxydans alcohol dehydrogenase cytochrome c subunit precursor AdhB SWALL:CYCA_GLUOX (SWALL:Q47945) (478 aa) fasta scores: E(): 1.6e-38, 40.33% id in 424 aa; cytochrome c 1451594..1452886 Burkholderia pseudomallei K96243 3092390 YP_107879.1 CDS BPSL1258 NC_006350.1 1452894 1453076 D hypothetical protein 1452894..1453076 Burkholderia pseudomallei K96243 3092391 YP_107880.1 CDS BPSL1259 NC_006350.1 1453089 1453661 D Similar to Thermus thermophilus cytochrome c oxidase polypeptide II CbaB or CtaC SWALL:COX2_THETH (SWALL:P98052) (168 aa) fasta scores: E(): 7.7e-16, 32.89% id in 152 aa, and to Bacillus halodurans cytochrome c oxidase subunit II bh0740 SWALL:Q9KEV9 (EMBL:AP001509) (157 aa) fasta scores: E(): 8.8e-14, 29.67% id in 155 aa; cytochrome c oxidase subunit II-like protein 1453089..1453661 Burkholderia pseudomallei K96243 3094156 YP_107881.1 CDS BPSL1260 NC_006350.1 1453648 1455273 D Identical to previously sequenced although longer in its N-terminal region than Burkholderia pseudomallei cytochrome c oxidase subunit 1 SWALL:Q9RQP4 (EMBL:AF087002) (512 aa) fasta scores: E(): 1.3e-201, 99.8% id in 512 aa, and to Thermus thermophilus cytochrome c oxidase polypeptide I CbaA SWALL:COX1_THETH (SWALL:Q56408) (562 aa) fasta scores: E(): 6.5e-67, 37.84% id in 547 aa; cytochrome c oxidase subunit 1 1453648..1455273 Burkholderia pseudomallei K96243 3094157 YP_107882.1 CDS BPSL1261 NC_006350.1 1455270 1456058 D Similar in its C-terminal region to Pseudomonas aeruginosa cytochrome c4 precursor pa5490 SWALL:CYC4_PSEAE (SWALL:P00106) (201 aa) fasta scores: E(): 3.8e-12, 34.09% id in 176 aa, and to Rhizobium meliloti cytochrome c class I protein, probably cytochrome c4 CycA or rb0945 or smb21367 SWALL:Q92UY9 (EMBL:AL603645) (374 aa) fasta scores: E(): 4.5e-08, 31.01% id in 187 aa. N-terminal region presents possible hydrophobic membrane spanning domains; cytochrome c-like protein 1455270..1456058 Burkholderia pseudomallei K96243 3094030 YP_107883.1 CDS BPSL1262 NC_006350.1 1456647 1458101 R N-terminal region similar to Vibrio cholerae hypothetical protein vca0034 SWALL:Q9KND1 (EMBL:AE004347) (290 aa) fasta scores: E(): 8e-10, 26.13% id in 264 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc1373 SWALL:AAM40671 (EMBL:AE012236) (266 aa) fasta scores: E(): 5.4e-08, 26.37% id in 254 aa; hypothetical protein complement(1456647..1458101) Burkholderia pseudomallei K96243 3094031 YP_107884.1 CDS BPSL1263 NC_006350.1 1458136 1459878 R Similar to the C-terminal region of Pseudomonas aeruginosa hypothetical protein pa4601 SWALL:Q9HVI8 (EMBL:AE004874) (1415 aa) fasta scores: E(): 1.2e-59, 36.11% id in 540 aa, and to Rhizobium meliloti hypothetical protein r00959 or smc00038 SWALL:Q92KJ3 (EMBL:AL591785) (772 aa) fasta scores: E(): 6.1e-53, 37.36% id in 447 aa; hypothetical protein complement(1458136..1459878) Burkholderia pseudomallei K96243 3091526 YP_107885.1 CDS BPSL1264 NC_006350.1 1460171 1460719 D Similar to Caulobacter crescentus bacterioferritin comigratory protein, cc1673 SWALL:Q9A7P7 (EMBL:AE005842) (177 aa) fasta scores: E(): 1.4e-26, 51.16% id in 172 aa, and to Escherichia coli, and Escherichia coli O157:H7 bacterioferritin comigratory protein Bcp or b2480 or z3739 or ecs3342 SWALL:BCP_ECOLI (SWALL:P23480) (156 aa) fasta scores: E(): 2.9e-08, 29.74% id in 158 aa; AhpC/TSA family protein 1460171..1460719 Burkholderia pseudomallei K96243 3091527 YP_107886.1 CDS BPSL1265 NC_006350.1 1461243 1461866 R Similar to Listeria monocytogenes hypothetical protein lmo2391 SWALL:Q8Y4P4 (EMBL:AL591983) (209 aa) fasta scores: E(): 2.5e-19, 37.98% id in 208 aa, and to Bacillus subtilis hypothetical protein YhfK SWALL:O07609 (EMBL:Y14083) (214 aa) fasta scores: E(): 5.7e-14, 30.37% id in 214 aa; hypothetical protein complement(1461243..1461866) Burkholderia pseudomallei K96243 3091446 YP_107887.1 CDS BPSL1266 NC_006350.1 1462488 1465790 R Similar to Escherichia coli hypothetical protein YegO or b2076 SWALL:YEGO_ECOLI (SWALL:P76399) (1025 aa) fasta scores: E(): 4.3e-154, 56.87% id in 1076 aa, and to Ralstonia solanacearum probable drug efflux transmembrane protein rsp1199 or rs03143 SWALL:Q8XQM3 (EMBL:AL646083) (1033 aa) fasta scores: E(): 4.8e-165, 60.62% id in 1082 aa; transport system membrane protein complement(1462488..1465790) Burkholderia pseudomallei K96243 3091447 YP_107888.1 CDS BPSL1267 NC_006350.1 1465791 1468901 R Similar to Ralstonia solanacearum probable drug efflux pump transmembrane protein rsp1198 or rs03142 SWALL:Q8XQM4 (EMBL:AL646083) (1041 aa) fasta scores: E(): 0, 70.66% id in 1026 aa, and to Escherichia coli hypothetical protein YegN or b2075 SWALL:YEGN_ECOLI (SWALL:P76398) (1040 aa) fasta scores: E(): 0, 62.98% id in 1024 aa; transport system membrane protein complement(1465791..1468901) Burkholderia pseudomallei K96243 3093325 YP_107889.1 CDS BPSL1268 NC_006350.1 1468915 1470252 R Similar to Ralstonia solanacearum resistance transmembrane protein rsp1197 or rs03141 SWALL:Q8XQM5 (EMBL:AL646083) (449 aa) fasta scores: E(): 4.6e-70, 53.22% id in 434 aa, and to Escherichia coli hypothetical protein YegM precursor or b2074 SWALL:YEGM_ECOLI (SWALL:P76397) (415 aa) fasta scores: E(): 1.3e-55, 44.96% id in 407 aa; transport system membrane protein complement(1468915..1470252) Burkholderia pseudomallei K96243 3093326 YP_107890.1 CDS BPSL1269 NC_006350.1 1470736 1471563 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1630 SWALL:Q9I392 (EMBL:AE004590) (288 aa) fasta scores: E(): 1.9e-27, 37.34% id in 241 aa, and to Escherichia coli MHP operon transcriptional activator MhpR or b0346 SWALL:MHPR_ECOLI (SWALL:P77569) (315 aa) fasta scores: E(): 2.2e-10, 28.51% id in 249 aa; IclR family transcriptional regulator complement(1470736..1471563) Burkholderia pseudomallei K96243 3091944 YP_107891.1 CDS BPSL1270 NC_006350.1 1472111 1474072 R Similar to Xanthomonas campestris pv. campestris str. ATCC 33913 alkaline phosphatase PhoX SWALL:AAM41064 (EMBL:AE012279) (661 aa) fasta scores: E(): 2e-184, 73.7% id in 658 aa; exported alkaline phosphatase complement(1472111..1474072) Burkholderia pseudomallei K96243 3091945 YP_107892.1 CDS BPSL1271 NC_006350.1 1474323 1474844 D hypothetical protein 1474323..1474844 Burkholderia pseudomallei K96243 3093525 YP_107893.1 CDS BPSL1272 NC_006350.1 1474934 1475395 D Similar to Ralstonia solanacearum hypothetical protein rsp0526 or rs00405 SWALL:Q8XSF0 (EMBL:AL646079) (143 aa) fasta scores: E(): 2.5e-23, 57.14% id in 140 aa, and to Streptomyces coelicolor hypothetical protein sco2652 or sc8e4a.22 SWALL:Q9L1Y3 (EMBL:AL138662) (144 aa) fasta scores: E(): 1.1e-14, 44.28% id in 140 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 1474934..1475395 Burkholderia pseudomallei K96243 3093526 YP_107894.1 CDS BPSL1273 NC_006350.1 1475662 1476288 D Similar to Pseudomonas aeruginosa hypothetical protein pa0741 SWALL:Q9I5I8 (EMBL:AE004509) (213 aa) fasta scores: E(): 3.7e-28, 46.47% id in 213 aa, and to Agrobacterium tumefaciens hypothetical protein atu1999 or agr_c_3633 SWALL:Q8UDW9 (EMBL:AE009151) (203 aa) fasta scores: E(): 2.1e-26, 48.09% id in 210 aa; hypothetical protein 1475662..1476288 Burkholderia pseudomallei K96243 3093841 YP_107895.1 CDS BPSL1274 NC_006350.1 1477083 1477739 R hypothetical protein complement(1477083..1477739) Burkholderia pseudomallei K96243 3093842 YP_107896.1 CDS BPSL1275 NC_006350.1 1477886 1478353 D Similar to Zymomonas mobilis glutamate uptake regulatory protein Grp SWALL:GRP_ZYMMO (SWALL:P74996) (164 aa) fasta scores: E(): 4.3e-25, 46.3% id in 149 aa, to Caulobacter crescentus transcriptional regulator, AsnC family cc0424 SWALL:Q9AB10 (EMBL:AE005714) (164 aa) fasta scores: E(): 2.1e-35, 63.75% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical transcriptional regulator YbaO or b0447 or z0555 or ecs0501 SWALL:YBAO_ECOLI (SWALL:P54986) (152 aa) fasta scores: E(): 3.7e-32, 56.66% id in 150 aa; AsnC family transcriptional regulator 1477886..1478353 Burkholderia pseudomallei K96243 3094265 YP_107897.1 CDS BPSL1276 NC_006350.1 1478485 1479264 R Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 1.8e-31, 46.66% id in 240 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa3538 SWALL:Q9HY73 (EMBL:AE004774) (360 aa) fasta scores: E(): 3.5e-43, 59.83% id in 239 aa. Note: This CDS is shorter in its C-terminal region than most of its database matches; ABC transporter ATP-binding protein complement(1478485..1479264) Burkholderia pseudomallei K96243 3094266 YP_107898.1 CDS BPSL1277 NC_006350.1 1479266 1480978 R Similar to Agrobacterium tumefaciens ABC transporter membrane spanning protein FbpA3 or atu0408 or agr_c_717 SWALL:Q8UI90 (EMBL:AE009011) (558 aa) fasta scores: E(): 1.1e-101, 55.91% id in 558 aa, and to Synechocystis sp. iron utilization protein HitB or slr0327 SWALL:Q55534 (EMBL:D63999) (557 aa) fasta scores: E(): 5.1e-65, 40.18% id in 535 aa. Note: this CDS is a few amino acid residues longer in its N-terminal region than most of its database matches; ABC transporter membrane protein complement(1479266..1480978) Burkholderia pseudomallei K96243 3093930 YP_107899.1 CDS BPSL1278 NC_006350.1 1480968 1482023 R Similar to Serratia marcescens iron(III)-binding periplasmic protein precursor SfuA SWALL:SFUA_SERMA (SWALL:P21408) (338 aa) fasta scores: E(): 1.6e-15, 27.94% id in 340 aa, and to Brucella melitensis iron(III)-binding periplasmic protein precursor bmeii0584 SWALL:Q8YCE7 (EMBL:AE009695) (338 aa) fasta scores: E(): 4.7e-83, 64.77% id in 335 aa; ABC transporter iron-binding exported protein complement(1480968..1482023) Burkholderia pseudomallei K96243 3093931 YP_107900.1 CDS BPSL1279 NC_006350.1 1482263 1482442 D hypothetical protein 1482263..1482442 Burkholderia pseudomallei K96243 3093555 YP_107901.1 CDS BPSL1280 NC_006350.1 1482584 1483948 R Similar to Escherichia coli phenylalanine-specific permease PheP or b0576 SWALL:PHEP_ECOLI (SWALL:P24207) (458 aa) fasta scores: E(): 9.6e-71, 43.91% id in 444 aa, and to Escherichia coli, and Escherichia coli O157:H7 proline-specific permease ProY or b0402 or z0500 or ecs0452 SWALL:PROY_ECOLI (SWALL:P77327) (457 aa) fasta scores: E(): 7.1e-103, 61.77% id in 450 aa; amino acid transport system, membrane protein complement(1482584..1483948) Burkholderia pseudomallei K96243 3093556 YP_107902.1 CDS BPSL1281 NC_006350.1 1484133 1486409 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2889 or rs00211 SWALL:Q8XVE2 (EMBL:AL646072) (740 aa) fasta scores: E(): 7.5e-60, 32.04% id in 752 aa, and to Salmonella typhi membrane protein sty1095 SWALL:Q8Z7R8 (EMBL:AL627269) (717 aa) fasta scores: E(): 1.3e-24, 25.21% id in 694 aa; hypothetical protein complement(1484133..1486409) Burkholderia pseudomallei K96243 3091577 YP_107903.1 CDS BPSL1282 NC_006350.1 1487013 1490357 D Similar to Chlorobium tepidum TLS exodeoxyribonuclease V, gamma subunit RecC SWALL:AAM72301 (EMBL:AE012870) (1065 aa) fasta scores: E(): 2.8e-63, 32.27% id in 1137 aa, and to Escherichia coli exodeoxyribonuclease V gamma chain RecC or b2822 SWALL:EX5C_ECOLI (SWALL:P07648) (1122 aa) fasta scores: E(): 3.2e-50, 29.65% id in 1177 aa; exodeoxyribonuclease V gamma chain 1487013..1490357 Burkholderia pseudomallei K96243 3091578 YP_107904.1 CDS BPSL1283 NC_006350.1 1490354 1494166 D Similar to Escherichia coli exodeoxyribonuclease V beta chain RecB or RorA or b2820 SWALL:EX5B_ECOLI (SWALL:P08394) (1180 aa) fasta scores: E(): 2.5e-16, 33.74% id in 1292 aa, and to Neisseria meningitidis RecB SWALL:Q8RMG4 (EMBL:AF495855) (1204 aa) fasta scores: E(): 5.6e-41, 33.64% id in 1299 aa; exodeoxyribonuclease V subunit beta 1490354..1494166 Burkholderia pseudomallei K96243 3092458 YP_107905.1 CDS BPSL1284 NC_006350.1 1494163 1496859 D Similar to Escherichia coli exodeoxyribonuclease V alpha chain RecD or b2819 SWALL:EX5A_ECOLI (SWALL:P04993) (608 aa) fasta scores: E(): 4.3e-28, 30.05% id in 845 aa, and to Salmonella typhimurium exonuclease V, alpha chain RecD or stm2993 SWALL:Q8ZMB7 (EMBL:AE008837) (611 aa) fasta scores: E(): 9.7e-28, 31.19% id in 856 aa. Note: This CDS contains an internal region (from approx. residue 330 to approx. residue 615) that presents little or no similarity to the database matches; exodeoxyribonuclease V subunit alpha 1494163..1496859 Burkholderia pseudomallei K96243 3092459 YP_107906.1 CDS BPSL1285 NC_006350.1 1496856 1497260 D Similar to Escherichia coli hypothetical protein YaeJ or b0191 SWALL:YAEJ_ECOLI (SWALL:P40711) (140 aa) fasta scores: E(): 2.4e-24, 62.3% id in 130 aa, and to Salmonella typhi release factor sty0265 SWALL:Q8Z994 (EMBL:AL627266) (140 aa) fasta scores: E(): 7e-23, 57.48% id in 127 aa; peptidyl-tRNA hydrolase domain-containing protein 1496856..1497260 Burkholderia pseudomallei K96243 3092812 YP_107907.1 CDS BPSL1286 NC_006350.1 1497670 1498881 R Similar to Clostridium acetobutylicum sensory protein, containing EAL-domain cac0322 SWALL:Q97M76 (EMBL:AE007546) (412 aa) fasta scores: E(): 2.7e-21, 27.22% id in 393 aa, and to Pseudomonas aeruginosa hypothetical protein pa3258 SWALL:Q9HYY2 (EMBL:AE004748) (601 aa) fasta scores: E(): 2.1e-18, 34.97% id in 223 aa. Note: This CDS is shorter in its C-terminal region than most of its database matches; hypothetical protein complement(1497670..1498881) Burkholderia pseudomallei K96243 3092813 YP_107908.1 CDS BPSL1287 NC_006350.1 1499926 1500858 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2507 or rs01075 SWALL:Q8XWG7 (EMBL:AL646070) (310 aa) fasta scores: E(): 3.3e-43, 51.85% id in 297 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu2079 or agr_c_3767 SWALL:Q8UDP2 (EMBL:AE009158) (329 aa) fasta scores: E(): 7.1e-25, 34.2% id in 307 aa; hypothetical protein complement(1499926..1500858) Burkholderia pseudomallei K96243 3094649 YP_107909.1 CDS BPSL1288 NC_006350.1 1501151 1501375 R lipoprotein complement(1501151..1501375) Burkholderia pseudomallei K96243 3094650 YP_107910.1 CDS osmB NC_006350.1 1501627 1501839 R Similar to Escherichia coli, and Escherichia coli O157:H7 osmotically inducible lipoprotein B precursor OsmB or b1283 or z2523 or ecs1856 SWALL:OSMB_ECOLI (SWALL:P17873) (72 aa) fasta scores: E(): 7.1e-06, 54.83% id in 62 aa, and to Yersinia pestis osmotically inducible lipoprotein B ypo2229 SWALL:Q8ZEE4 (EMBL:AJ414151) (71 aa) fasta scores: E(): 2.4e-07, 51.51% id in 66 aa; osmotically inducible lipoprotein B complement(1501627..1501839) Burkholderia pseudomallei K96243 3093217 YP_107911.1 CDS thiC NC_006350.1 1502063 1503994 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(1502063..1503994) Burkholderia pseudomallei K96243 3092226 YP_107912.1 CDS BPSL1290a NC_006350.1 1504266 1504625 R Doubtful CDS. No significant database matches; hypothetical protein complement(1504266..1504625) Burkholderia pseudomallei K96243 3093503 YP_107913.1 CDS BPSL1291 NC_006350.1 1504644 1504934 D hypothetical protein 1504644..1504934 Burkholderia pseudomallei K96243 3093504 YP_107914.1 CDS BPSL1292 NC_006350.1 1505095 1505919 D Similar to Ralstonia solanacearum hypothetical protein rsc1589 or rs03951 SWALL:Q8XZ17 (EMBL:AL646065) (267 aa) fasta scores: E(): 5.4e-33, 44.61% id in 269 aa, and to Rhizobium meliloti hypothetical protein r03228 or smc03845 SWALL:Q92JS1 (EMBL:AL591793) (272 aa) fasta scores: E(): 4.6e-14, 36.81% id in 201 aa; hypothetical protein 1505095..1505919 Burkholderia pseudomallei K96243 3091727 YP_107915.1 CDS BPSL1293 NC_006350.1 1506336 1507082 D Similar to Ralstonia solanacearum transmembrane hydrogenase cytochrome B-type subunit oxidoreductase rsc0619 or rs01520 SWALL:Q8Y1S0 (EMBL:AL646060) (212 aa) fasta scores: E(): 3.9e-42, 58.63% id in 191 aa, and to Rhizobium loti hypothetical protein mlr0877 SWALL:Q98LU1 (EMBL:AP002996) (293 aa) fasta scores: E(): 1.6e-08, 29.47% id in 268 aa. Note: Contains a repetitive region in the N-terminal domain; hypothetical protein 1506336..1507082 Burkholderia pseudomallei K96243 3091728 YP_107916.1 CDS BPSL1294 NC_006350.1 1507098 1507889 D Similar to Ralstonia solanacearum hypothetical protein rsc0620 or rs01521 SWALL:Q8Y1R9 (EMBL:AL646060) (257 aa) fasta scores: E(): 3e-82, 73.01% id in 252 aa, and to Anabaena sp. hypothetical protein lr2944 SWALL:Q8YSY5 (EMBL:AP003591) (240 aa) fasta scores: E(): 3e-30, 39.2% id in 250 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1507098..1507889 Burkholderia pseudomallei K96243 3094524 YP_107917.1 CDS BPSL1295 NC_006350.1 1508343 1509278 D Similar to Salmonella typhi membrane protein sty2198 SWALL:Q8Z5Q8 (EMBL:AL627272) (306 aa) fasta scores: E(): 9.5e-30, 40.55% id in 286 aa, and to Yersinia pestis membrane protein ypo1203 SWALL:Q8ZGS7 (EMBL:AJ414147) (296 aa) fasta scores: E(): 5.3e-29, 39% id in 300 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1508343..1509278 Burkholderia pseudomallei K96243 3094525 YP_107918.1 CDS BPSL1296 NC_006350.1 1509665 1510861 R Similar to Clostridium acetobutylicum integral membrane protein similar to antibiotic resistance protein B.subtilis cac0560 SWALL:Q97LK0 (EMBL:AE007571) (441 aa) fasta scores: E(): 6.3e-55, 43.35% id in 376 aa, and to Escherichia coli hypothetical protein YgaY or b2680/b2681 SWALL:YGAY_ECOLI (SWALL:P76628) (394 aa) fasta scores: E(): 1.7e-48, 42.07% id in 385 aa; hypothetical protein complement(1509665..1510861) Burkholderia pseudomallei K96243 3092525 YP_107919.1 CDS BPSL1297 NC_006350.1 1511140 1511928 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0114 or rs03008 SWALL:Q8XTJ4 (EMBL:AL646076) (260 aa) fasta scores: E(): 1.5e-59, 69.44% id in 252 aa, and to Streptomyces coelicolor integral membrane protein sco6371 or sc4a2.07 SWALL:O86663 (EMBL:AL031182) (279 aa) fasta scores: E(): 1.5e-43, 54.43% id in 237 aa; hypothetical protein 1511140..1511928 Burkholderia pseudomallei K96243 3092526 YP_107920.1 CDS BPSL1298 NC_006350.1 1512096 1512506 D Similar to Ralstonia solanacearum hypothetical signal peptide protein rsp0115 or rs03007 SWALL:Q8XTJ3 (EMBL:AL646076) (135 aa) fasta scores: E(): 1.2e-21, 58.2% id in 134 aa; hypothetical protein 1512096..1512506 Burkholderia pseudomallei K96243 3093386 YP_107921.1 CDS BPSL1299 NC_006350.1 1512862 1513689 R Similar to Ralstonia solanacearum hypothetical protein rsc1795 or rs04195 SWALL:Q8XYG3 (EMBL:AL646066) (282 aa) fasta scores: E(): 2.8e-54, 53.54% id in 282 aa, and to Streptomyces avermitilis cyclic nucleotide phosphodiesterase SWALL:Q93GX3 (EMBL:AB070957) (257 aa) fasta scores: E(): 5.3e-29, 38.99% id in 259 aa; phosphodiesterase complement(1512862..1513689) Burkholderia pseudomallei K96243 3093387 YP_107922.1 CDS BPSL1300 NC_006350.1 1513884 1514912 R Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1794 or rs04193 SWALL:Q8XYG4 (EMBL:AL646066) (359 aa) fasta scores: E(): 1.5e-68, 64.36% id in 348 aa, and to Escherichia coli ferric transport ATP-binding protein AfuC or b0262 SWALL:AFUC_ECOLI (SWALL:P37009) (348 aa) fasta scores: E(): 1.9e-36, 40.76% id in 341 aa; ABC transporter ATP-binding protein complement(1513884..1514912) Burkholderia pseudomallei K96243 3091741 YP_107923.1 CDS BPSL1301 NC_006350.1 1515088 1516002 R Similar to Ralstonia solanacearum probable permease transmembrane ABC transporter protein rsc1793 or rs04192 SWALL:Q8XYG5 (EMBL:AL646066) (265 aa) fasta scores: E(): 4.6e-63, 71.59% id in 250 aa, and to Escherichia coli hypothetical ABC transporter permease YdcV or b1443 SWALL:YDCV_ECOLI (SWALL:P77505) (264 aa) fasta scores: E(): 6.5e-12, 33.84% id in 263 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; ABC transporter membrane protein complement(1515088..1516002) Burkholderia pseudomallei K96243 3091742 YP_107924.1 CDS BPSL1302 NC_006350.1 1517203 1518027 R Similar to Escherichia coli, and Escherichia coli O157:H7 molybdenum transport system permease ModB or ChlJ or b0764 or z0934 or ecs0792 SWALL:MODB_ECOLI (SWALL:P09834) (229 aa) fasta scores: E(): 1.3e-13, 32.03% id in 206 aa, and to Ralstonia solanacearum probable transport system permease transmembrane ABC transporter protein rsc1792 or rs04191 SWALL:Q8XYG6 (EMBL:AL646066) (282 aa) fasta scores: E(): 4.1e-70, 70.58% id in 272 aa. Note: this CDS is longer in its N-terminal region than some of its database matches; hypothetical protein complement(1517203..1518027) Burkholderia pseudomallei K96243 3091484 YP_107925.1 CDS BPSL1303 NC_006350.1 1518129 1519190 R Similar to Ralstonia solanacearum probable solute-binding periplasmic rsc1791 or rs04190 SWALL:Q8XYG7 (EMBL:AL646066) (343 aa) fasta scores: E(): 1.9e-99, 73.51% id in 336 aa, and to Campylobacter jejuni periplasmic solute-binding protein cj0727 SWALL:Q9PPI0 (EMBL:AL139076) (348 aa) fasta scores: E(): 1.6e-27, 34.33% id in 300 aa; hypothetical protein complement(1518129..1519190) Burkholderia pseudomallei K96243 3091485 YP_107926.1 CDS BPSL1304 NC_006350.1 1519247 1520281 R Similar to Escherichia coli, and Escherichia coli O157:H7 ribose operon repressor RbsR or b3753 or z5254 or ecs4695 SWALL:RBSR_ECOLI (SWALL:P25551) (329 aa) fasta scores: E(): 6.4e-26, 33.64% id in 321 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1790 or rs04189 SWALL:Q8XYG8 (EMBL:AL646066) (360 aa) fasta scores: E(): 2.4e-62, 56.39% id in 344 aa; LacI family transcriptional regulator complement(1519247..1520281) Burkholderia pseudomallei K96243 3093964 YP_107927.1 CDS BPSL1304A NC_006350.1 1520978 1521415 R No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of Burkholderia cepacia outer membrane protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 0.0057, 44.59% id in 74 aa, and Ralstonia solanacearum probable porin transmembrane protein RS04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 0.024, 42.85% id in 63 aa; hypothetical protein complement(1520978..1521415) Burkholderia pseudomallei K96243 3093965 YP_107928.1 CDS BPSL1304B NC_006350.1 1521614 1522060 R Poor database matches. Weakly similar to an internal region of Mycobacterium tuberculosis, and Mycobacterium bovis lipoprotein precursor LppW SWALL:LPPW_MYCTU (SWALL:Q10823) (314 aa) fasta scores: E(): 1.4, 34.74% id in 118 aa; hypothetical protein complement(1521614..1522060) Burkholderia pseudomallei K96243 3094731 YP_107929.1 CDS BPSL1305 NC_006350.1 1522632 1523786 R hypothetical protein complement(1522632..1523786) Burkholderia pseudomallei K96243 3094732 YP_107930.1 CDS BPSL1306 NC_006350.1 1524128 1525492 R C-terminus is similar to an internal region of Salmonella typhimurium membrane domain involved in signal transduction, diguanylate cyclase/phosphodiesterase domain 1, diguanylate cyclase/phosphodiesterase domain 2 stm3388 SWALL:Q8ZLN7 (EMBL:AE008856) (699 aa) fasta scores: E(): 1.8e-18, 30.02% id in 393 aa. C-terminal region is similar to Rhizobium loti response regulator protein mll0859 SWALL:Q98LV6 (EMBL:AP002995) (408 aa) fasta scores: E(): 2.3e-20, 43.59% id in 195 aa; hypothetical protein complement(1524128..1525492) Burkholderia pseudomallei K96243 3094471 YP_107931.1 CDS BPSL1307 NC_006350.1 1526205 1526807 D Similar to Ralstonia solanacearum hypothetical protein rsp0712 or rs01737 SWALL:Q8XRW9 (EMBL:AL646080) (200 aa) fasta scores: E(): 1.4e-48, 57.5% id in 200 aa, and to Rhizobium loti hypothetical protein mll4476 SWALL:Q98DZ5 (EMBL:AP003004) (209 aa) fasta scores: E(): 1.5e-16, 30.76% id in 195 aa; hypothetical protein 1526205..1526807 Burkholderia pseudomallei K96243 3094472 YP_107932.1 CDS BPSL1308 NC_006350.1 1526860 1527657 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0711 or rs01738 SWALL:Q8XRX0 (EMBL:AL646080) (277 aa) fasta scores: E(): 3.6e-60, 58.42% id in 267 aa, and to Rhizobium loti hypothetical protein mll0509 SWALL:Q98MN1 (EMBL:AP002995) (295 aa) fasta scores: E(): 2.1e-21, 35.61% id in 278 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; hypothetical protein 1526860..1527657 Burkholderia pseudomallei K96243 3094140 YP_107933.1 CDS BPSL1309 NC_006350.1 1528053 1528691 R Similar to Ralstonia solanacearum hypothetical protein rsp0689 or rs01760 SWALL:Q8XRZ2 (EMBL:AL646080) (212 aa) fasta scores: E(): 4.2e-61, 71.69% id in 212 aa, and to Rhizobium loti transcriptional regulator mll0013 SWALL:Q98NS0 (EMBL:AP002994) (216 aa) fasta scores: E(): 6.3e-30, 42.78% id in 201 aa; hypothetical protein complement(1528053..1528691) Burkholderia pseudomallei K96243 3094141 YP_107934.1 CDS BPSL1310 NC_006350.1 1528813 1530354 D Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 6.7e-42, 36.41% id in 497 aa, to Rhizobium loti transcriptional regulator mlr6174 SWALL:Q98A34 (EMBL:AP003008) (489 aa) fasta scores: E(): 7.1e-51, 39.6% id in 500 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5431 SWALL:Q9HTD5 (EMBL:AE004955) (491 aa) fasta scores: E(): 5.4e-50, 42.88% id in 499 aa; GntR family transcriptional regulator 1528813..1530354 Burkholderia pseudomallei K96243 3094229 YP_107935.1 CDS BPSL1311 NC_006350.1 1530602 1531096 R Similar to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2e-12, 30.92% id in 152 aa, to Ralstonia solanacearum probable transcription regulator protein rsc2801 or rs00304 SWALL:Q8XVM9 (EMBL:AL646071) (158 aa) fasta scores: E(): 1.6e-18, 39.61% id in 154 aa, and to Rhizobium loti transcription regulator protein msi248 SWALL:CAD31280 (EMBL:AL672114) (151 aa) fasta scores: E(): 9e-17, 42.46% id in 146 aa; AsnC family transcriptional regulator complement(1530602..1531096) Burkholderia pseudomallei K96243 3094230 YP_107936.1 CDS glmS2 NC_006350.1 1531255 1533156 D Similar to Escherichia coli glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS or b3729 SWALL:GLMS_ECOLI (SWALL:P17169) (608 aa) fasta scores: E(): 6.3e-89, 48.27% id in 638 aa, and to Ralstonia solanacearum glucosamine--fructose-6-phosphate aminotransferase [isomerizing] rsc0178 or rs00609 SWALL:GLMS_RALSO (SWALL:Q8Y303) (611 aa) fasta scores: E(): 8e-118, 60.25% id in 639 aa; glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2 1531255..1533156 Burkholderia pseudomallei K96243 3091988 YP_107937.1 CDS BPSL1313 NC_006350.1 1533366 1534697 R Similar to Anabaena sp. hypothetical protein all1106 SWALL:Q8YXV3 (EMBL:AP003584) (475 aa) fasta scores: E(): 4.6e-42, 38.52% id in 462 aa, and to Streptomyces antibioticus dioxygenase SimC5 SWALL:Q9AMI1 (EMBL:AF324838) (456 aa) fasta scores: E(): 9.2e-42, 37.68% id in 467 aa; dioxygenase complement(1533366..1534697) Burkholderia pseudomallei K96243 3093744 YP_107938.1 CDS BPSL1314 NC_006350.1 1534719 1535423 R Similar to Pseudomonas aeruginosa hypothetical protein pa3765 SWALL:Q9HXN0 (EMBL:AE004795) (194 aa) fasta scores: E(): 9.9e-27, 56.1% id in 221 aa, and to Caulobacter crescentus hypothetical protein cc2024 SWALL:Q9A6R0 (EMBL:AE005875) (186 aa) fasta scores: E(): 1.6e-22, 44.39% id in 223 aa. Note: This CDS contains an internal region that has no similarities with the database matches, from residue 75 to residue 111; hypothetical protein complement(1534719..1535423) Burkholderia pseudomallei K96243 3093745 YP_107939.1 CDS BPSL1315 NC_006350.1 1535587 1536486 R Similar to, although shorter in its N-terminal region than Agrobacterium tumefaciens transcriptional regulator, LysR family atu4367 or agr_l_999 SWALL:Q8U7T2 (EMBL:AE009365) (345 aa) fasta scores: E(): 2.2e-93, 75.25% id in 299 aa, and similar in its full length to Pseudomonas aeruginosa probable transcriptional regulator pa2877 SWALL:Q9HZX0 (EMBL:AE004714) (297 aa) fasta scores: E(): 2.3e-72, 61.74% id in 298 aa; LysR family transcriptional regulator complement(1535587..1536486) Burkholderia pseudomallei K96243 3091704 YP_107940.1 CDS BPSL1316 NC_006350.1 1536737 1537507 D Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa2918 SWALL:Q9HZS9 (EMBL:AE004718) (257 aa) fasta scores: E(): 2.1e-76, 83.26% id in 257 aa, and to Rhizobium loti probable dehydrogenase/reductase mlr1583 SWALL:Q98K90 (EMBL:AP002997) (243 aa) fasta scores: E(): 1.5e-24, 40.23% id in 251 aa; short chain dehydrogenase 1536737..1537507 Burkholderia pseudomallei K96243 3091705 YP_107941.1 CDS BPSL1317 NC_006350.1 1537725 1539116 R Similar to Ralstonia solanacearum lipoprotein transmembrane rsp0124 or rs02998 SWALL:Q8XTI4 (EMBL:AL646076) (276 aa) fasta scores: E(): 6.3e-37, 71.27% id in 282 aa, and to Xanthomonas axonopodis hypothetical protein xac0677 SWALL:AAM35566 (EMBL:AE011696) (271 aa) fasta scores: E(): 9.9e-12, 40.49% id in 284 aa. Note: this CDS is longer in its C-terminal region than most of its database matches and the region rich in Ala, Pro, Ser adn Thr amino acids residues has limited similarities with the database matches; lipoprotein complement(1537725..1539116) Burkholderia pseudomallei K96243 3093833 YP_107942.1 CDS BPSL1318 NC_006350.1 1539500 1539907 R Similar to Pseudomonas aeruginosa hypothetical protein pa1837 SWALL:Q9I2Q8 (EMBL:AE004609) (165 aa) fasta scores: E(): 4.8e-10, 42.27% id in 123 aa, and to Caulobacter crescentus hypothetical protein cc1120 SWALL:Q9A974 (EMBL:AE005790) (168 aa) fasta scores: E(): 4.6e-09, 38.58% id in 127 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein complement(1539500..1539907) Burkholderia pseudomallei K96243 3093834 YP_107943.1 CDS BPSL1319 NC_006350.1 1539904 1541721 R Similar to Ralstonia solanacearum probable sulfite reductase oxidoreductase CysI2 or rsc1862 or rs03422 SWALL:Q8XYA0 (EMBL:AL646067) (577 aa) fasta scores: E(): 4.4e-50, 51.78% id in 616 aa, and to Phormidium laminosum ferredoxin--nitrite reductase NirA or Nir SWALL:NIR_PHOLA (SWALL:Q51879) (510 aa) fasta scores: E(): 6.6e-10, 26.8% id in 567 aa. Note: The region between residues 80 and 105 presents very low or none similarities with the database matches; nitrite/sulfite reductase complement(1539904..1541721) Burkholderia pseudomallei K96243 3094334 YP_107944.1 CDS BPSL1320 NC_006350.1 1542263 1542457 D Very low similarity to Ralstonia solanacearum probable transmembrane protein rsc0366 or rs03334 SWALL:Q8Y2H0 (EMBL:AL646058) (70 aa) fasta scores: E(): 0.0019, 42% id in 50 aa; hypothetical protein 1542263..1542457 Burkholderia pseudomallei K96243 3094335 YP_107945.1 CDS BPSL1321 NC_006350.1 1542534 1544009 R Similar to Pseudomonas aeruginosa hypothetical protein pa4132 SWALL:Q9HWP9 (EMBL:AE004829) (471 aa) fasta scores: E(): 9.9e-93, 55.16% id in 484 aa, and to Salmonella typhimurium regulatory protein, GntR family YdcR or stm1598 SWALL:Q8ZPC8 (EMBL:AE008770) (474 aa) fasta scores: E(): 6.7e-69, 47.21% id in 485 aa; GntR family transcriptional regulator complement(1542534..1544009) Burkholderia pseudomallei K96243 3094070 YP_107946.1 CDS BPSL1322 NC_006350.1 1544714 1545115 R Similar to Rhizobium loti small heat shock protein mlr4721 SWALL:Q98DG0 (EMBL:AP003004) (159 aa) fasta scores: E(): 9.2e-11, 40.15% id in 132 aa, and to Deinococcus radiodurans heat shock protein, Hsp20 family dr1114 SWALL:Q9RVB5 (EMBL:AE001961) (182 aa) fasta scores: E(): 1.3e-07, 32.45% id in 114 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches. It is also similar to BPSL2917 (140 aa) fasta scores: E(): 9.5e-27, 57.576% identity in 132 aa overlap; heat shock protein complement(1544714..1545115) Burkholderia pseudomallei K96243 3094071 YP_107947.1 CDS BPSL1323 NC_006350.1 1545147 1545584 R Similar to Thermotoga maritima heat shock protein, class I tm0374 SWALL:Q9WYK7 (EMBL:AE001717) (147 aa) fasta scores: E(): 1e-11, 34.78% id in 138 aa, and to Chlamydomonas reinhardtii chloroplast heat shock 22 kDa protein SWALL:HS2C_CHLRE (SWALL:P12811) (157 aa) fasta scores: E(): 2.4e-09, 34.69% id in 147 aa. Note: Presents also similarity to BPSL2918 (181 aa) fasta scors: E(): 1.6e-32, 59.333% identity in 150 aa overlap; heat shock protein complement(1545147..1545584) Burkholderia pseudomallei K96243 3094350 YP_107948.1 CDS BPSL1323a NC_006350.1 1545977 1546300 D Similar to Pseudomonas putida hypothetical protein SWALL:O68643 (EMBL:AF052749) (109 aa) fasta scores: E(): 2.2e-18, 48.57% id in 105 aa, and to Salmonella typhimurium cytoplasmic protein stm1261 SWALL:Q8ZPY1 (EMBL:AE008755) (108 aa) fasta scores: E(): 2.4e-19, 47.17% id in 106 aa; hypothetical protein 1545977..1546300 Burkholderia pseudomallei K96243 3094351 YP_107949.1 CDS pckG NC_006350.1 1547220 1549085 D GTP; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 1547220..1549085 Burkholderia pseudomallei K96243 3093468 YP_107950.1 CDS BPSL1325 NC_006350.1 1549366 1550298 D Similar to Streptomyces coelicolor 3-hydroxyacyl-CoA dehydrogenase sco6297 or scbac8d1.10C SWALL:Q93RX5 (EMBL:AL591084) (318 aa) fasta scores: E(): 2e-47, 45.65% id in 311 aa, and to Bacillus subtilis probable 3-hydroxybutyryl-CoA dehydrogenase MmgB SWALL:HBD_BACSU (SWALL:P45856) (287 aa) fasta scores: E(): 2e-12, 32.14% id in 224 aa; 3-hydroxyacyl-CoA dehydrogenase 1549366..1550298 Burkholderia pseudomallei K96243 3094011 YP_107951.1 CDS BPSL1326 NC_006350.1 1550869 1551717 R Similar to Burkholderia cepacia 2,2-dialkylglycine decarboxylase repressor protein DgdR SWALL:DGDR_BURCE (SWALL:P16931) (293 aa) fasta scores: E(): 3.3e-22, 35.71% id in 252 aa, and to Streptomyces coelicolor LysR-type transcriptional regulator sco6555 or sc4b5.05C SWALL:Q9ZBW3 (EMBL:AL034443) (292 aa) fasta scores: E(): 2e-33, 43.32% id in 277 aa; LysR family transcriptional regulator complement(1550869..1551717) Burkholderia pseudomallei K96243 3094012 YP_107952.1 CDS BPSL1327 NC_006350.1 1551987 1552382 D Similar to Pseudomonas putida malonate transporter MdcL SWALL:Q9Z446 (EMBL:AB017138) (163 aa) fasta scores: E(): 5.7e-27, 66.15% id in 130 aa, and to Acinetobacter calcoaceticus malonate carrier protein MdcL SWALL:Q9RGM5 (EMBL:AF121266) (133 aa) fasta scores: E(): 3.3e-19, 51.9% id in 131 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; malonate transport-related system membrane protein 1551987..1552382 Burkholderia pseudomallei K96243 3091661 YP_107953.1 CDS BPSL1328 NC_006350.1 1552405 1553163 D Similar to Pseudomonas putida malonate transporter MdcM SWALL:Q9Z445 (EMBL:AB017138) (254 aa) fasta scores: E(): 1.6e-59, 72.51% id in 251 aa, and to Malonomonas rubra MadM SWALL:O06932 (EMBL:U87980) (255 aa) fasta scores: E(): 2.3e-48, 61.53% id in 247 aa; malonate transport-related system membrane protein 1552405..1553163 Burkholderia pseudomallei K96243 3091662 YP_107954.1 CDS BPSL1329 NC_006350.1 1553456 1555102 D Similar to Xanthomonas campestris alpha subunit of malonate decarboxylase xcc3609 SWALL:AAM42879 (EMBL:AE012482) (548 aa) fasta scores: E(): 2.1e-149, 69.78% id in 546 aa, and to Burkholderia cepacia malonate decarboxylase alpha-subunit MdcA SWALL:Q93L22 (EMBL:AF029344) (560 aa) fasta scores: E(): 3.2e-148, 69.55% id in 555 aa; malonate decarboxylase subunit alpha 1553456..1555102 Burkholderia pseudomallei K96243 3094323 YP_107955.1 CDS BPSL1330 NC_006350.1 1555116 1555433 D acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta 1555116..1555433 Burkholderia pseudomallei K96243 3094324 YP_107956.1 CDS BPSL1331 NC_006350.1 1555430 1556377 D The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1555430..1556377 Burkholderia pseudomallei K96243 3092768 YP_107957.1 CDS BPSL1332 NC_006350.1 1556364 1557089 D Similar to Xanthomonas axonopodis malonate decarboxylase gamma subunit xac0563 SWALL:AAM35452 (EMBL:AE011683) (234 aa) fasta scores: E(): 2.1e-27, 44.63% id in 233 aa, and to Burkholderia cepacia malonate decarboxylase gamma-subunit MdcE SWALL:Q93L25 (EMBL:AF029344) (233 aa) fasta scores: E(): 2.8e-24, 42.6% id in 230 aa; malonate decarboxylase subunit gamma 1556364..1557089 Burkholderia pseudomallei K96243 3092769 YP_107958.2 CDS BPSL1333 NC_006350.1 1557064 1557990 D catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 1557064..1557990 Burkholderia pseudomallei K96243 3094671 YP_107959.1 CDS BPSL1334 NC_006350.1 1558572 1559342 D Possible pseudogene. Similar to the C-terminal region of Escherichia coli 2--(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase CitG or b0613 SWALL:CITG_ECOLI (SWALL:P77231) (292 aa) fasta scores: E(): 1.7e-15, 34.36% id in 259 aa, and to Xanthomonas campestris CitG protein or xcc3614 SWALL:AAM42884 (EMBL:AE012482) (279 aa) fasta scores: E(): 1.3e-29, 46.72% id in 244 aa. Similarity to orthologues extends beyond the predicted translational start site, however extended CDS lacks appropriate translational start. Upstream similarity ends at a repeat region; coenzyme-A synthase 1558572..1559342 Burkholderia pseudomallei K96243 3094672 YP_107960.1 CDS BPSL1335 NC_006350.1 1559339 1560277 D Similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 2.6e-14, 29.66% id in 300 aa, and to Xanthomonas campestris malonyl CoA-ACP transacylase MdcH or xcc3615 SWALL:AAM42885 (EMBL:AE012482) (306 aa) fasta scores: E(): 3.1e-40, 48.36% id in 306 aa, and to; ACP S-malonyltransferase 1559339..1560277 Burkholderia pseudomallei K96243 3094721 YP_107961.1 CDS BPSL1336 NC_006350.1 1560371 1560916 D Similar to Ralstonia solanacearum endonuclease rsc2452 or rs01154 SWALL:Q8XWM2 (EMBL:AL646070) (189 aa) fasta scores: E(): 3.8e-06, 32.16% id in 171 aa, and to the plasmid borne Escherichia coli, and Salmonella typhimurium endonuclease Nuc SWALL:Q46707 (EMBL:U09868) (177 aa) fasta scores: E(): 1.1e-05, 28.47% id in 151 aa; hypothetical protein 1560371..1560916 Burkholderia pseudomallei K96243 3094722 YP_107962.1 CDS BPSL1337 NC_006350.1 1561322 1562236 D Similar to Ralstonia solanacearum hypothetical protein rsp0795 or rs01912 SWALL:Q8XRN6 (EMBL:AL646080) (290 aa) fasta scores: E(): 1.3e-30, 37.63% id in 279 aa, and to Pseudomonas aeruginosa hypothetical protein pa1291 SWALL:Q9I453 (EMBL:AE004558) (279 aa) fasta scores: E(): 9.8e-27, 39.03% id in 269 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1561322..1562236 Burkholderia pseudomallei K96243 3094591 YP_107963.1 CDS BPSL1338 NC_006350.1 1562684 1563313 D Similar to Ralstonia solanacearum hypothetical protein rsc0129 or rs00999 SWALL:Q8Y352 (EMBL:AL646057) (202 aa) fasta scores: E(): 2.1e-39, 58.09% id in 210 aa, and to Ralstonia solanacearum glutathione S-transferase rsc2721 or rs00001 SWALL:Q8XVV6 (EMBL:AL646071) (202 aa) fasta scores: E(): 1.3e-10, 31.1% id in 209 aa; glutathione S-transferase-like protein 1562684..1563313 Burkholderia pseudomallei K96243 3094592 YP_107964.1 CDS BPSL1339 NC_006350.1 1563720 1565207 R Similar to Escherichia coli, and Escherichia coli O157:H7 proline/betaine transporter ProP or b4111 or z5713 or ecs5093 SWALL:PROP_ECOLI (SWALL:P30848) (500 aa) fasta scores: E(): 3.7e-94, 52.62% id in 458 aa, and to Streptomyces coelicolor integral membrane transport protein sco2336 or scc53.27 SWALL:Q9KXI4 (EMBL:AL357591) (462 aa) fasta scores: E(): 1.5e-111, 65.8% id in 465 aa; proline/betaine transporter complement(1563720..1565207) Burkholderia pseudomallei K96243 3094767 YP_107965.1 CDS BPSL1340 NC_006350.1 1565742 1566074 D Similar to Ralstonia solanacearum probable transmembrane protein rsp1275 or rs05320 SWALL:Q8XQF2 (EMBL:AL646083) (110 aa) fasta scores: E(): 3.7e-31, 79.8% id in 104 aa, and to Xanthomonas campestris hypothetical protein xcc2880 SWALL:AAM42152 (EMBL:AE012401) (111 aa) fasta scores: E(): 1.8e-22, 66% id in 100 aa; hypothetical protein 1565742..1566074 Burkholderia pseudomallei K96243 3094768 YP_107966.1 CDS dnaQ NC_006350.1 1566419 1567141 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(1566419..1567141) Burkholderia pseudomallei K96243 3092205 YP_107967.1 CDS rnhA NC_006350.1 1567199 1567645 R Similar to Escherichia coli, and Escherichia coli O157:H7 ribonuclease HI RnhA or Rnh or DasF or HerA or sdrA or b0214 or z0239 or ecs0210 SWALL:RNH_ECOLI (SWALL:P00647) (155 aa) fasta scores: E(): 2.2e-36, 65.44% id in 136 aa, and to Caulobacter crescentus ribonuclease H cc3365 SWALL:RNH_CAUCR (SWALL:Q9A341) (149 aa) fasta scores: E(): 2.4e-42, 75.18% id in 137 aa; ribonuclease HI complement(1567199..1567645) Burkholderia pseudomallei K96243 3092549 YP_107968.1 CDS BPSL1343 NC_006350.1 1567642 1568454 R Similar to Ralstonia solanacearum hypothetical protein rsc1514 or rs03790 SWALL:Q8XZ90 (EMBL:AL646065) (257 aa) fasta scores: E(): 2e-52, 57.56% id in 238 aa, and to Neisseria meningitidis hypothetical protein nmb1296 SWALL:Q9JZ46 (EMBL:AE002478) (221 aa) fasta scores: E(): 4.1e-15, 33.62% id in 232 aa; hypothetical protein complement(1567642..1568454) Burkholderia pseudomallei K96243 3093102 YP_107969.1 CDS BPSL1344 NC_006350.1 1568475 1569281 D Similar to Ralstonia solanacearum hydroxyacylglutathione hydrolase rsc1515 or rs03789 SWALL:Q8XZ89 (EMBL:AL646065) (284 aa) fasta scores: E(): 1.6e-51, 55.68% id in 264 aa, and to Synechocystis sp. probable hydroxyacylglutathione hydrolase sll1019 SWALL:GLO2_SYNY3 (SWALL:P72933) (257 aa) fasta scores: E(): 6.9e-32, 43.72% id in 263 aa; gultathione hydrolase 1568475..1569281 Burkholderia pseudomallei K96243 3093103 YP_107970.1 CDS BPSL1345 NC_006350.1 1569365 1571026 D Similar to Escherichia coli membrane-bound lytic murein transglycosylase D precursor MltD or DniR or b0211 SWALL:MLTD_ECOLI (SWALL:P23931) (452 aa) fasta scores: E(): 5.4e-35, 34.26% id in 467 aa, and to Ralstonia solanacearum membrane-bound lytic murein transglycosylase-like lipoprotein rsc1516 or rs03787 SWALL:Q8XZ88 (EMBL:AL646065) (451 aa) fasta scores: E(): 9.5e-99, 62.52% id in 451 aa; exported transglycosylase 1569365..1571026 Burkholderia pseudomallei K96243 3091560 YP_107971.1 CDS BPSL1346 NC_006350.1 1571107 1572399 D Similar to Archaeoglobus fulgidus hypothetical protein af0907 SWALL:O29355 (EMBL:AE001041) (419 aa) fasta scores: E(): 4.2e-27, 31.15% id in 398 aa, and to Escherichia coli bicyclomycin resistance protein Bcr or BicA or BicR or Sur or SuxA or b2182 SWALL:BCR_ECOLI (SWALL:P28246) (396 aa) fasta scores: E(): 4.6e-07, 23.78% id in 391 aa; hypothetical protein 1571107..1572399 Burkholderia pseudomallei K96243 3091561 YP_107972.1 CDS BPSL1347 NC_006350.1 1572506 1573639 R hypothetical protein complement(1572506..1573639) Burkholderia pseudomallei K96243 3093588 YP_107973.1 CDS BPSL1348 NC_006350.1 1573867 1574889 D Similar to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.4e-35, 36.74% id in 332 aa, and to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 1.1e-25, 31.09% id in 328 aa; AraC family transcriptional regulator 1573867..1574889 Burkholderia pseudomallei K96243 3093589 YP_107974.1 CDS carA NC_006350.1 1575304 1576449 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1575304..1576449 Burkholderia pseudomallei K96243 3092517 YP_107975.1 CDS BPSL1350 NC_006350.1 1576481 1577143 D Similar to Pseudomonas aeruginosa hypothetical protein pa4757 SWALL:YBF7_PSEAE (SWALL:P38102) (216 aa) fasta scores: E(): 8.6e-56, 71.16% id in 215 aa, and to Escherichia coli hypothetical protein YeaS or b1798 SWALL:YEAS_ECOLI (SWALL:P76249) (212 aa) fasta scores: E(): 5.2e-34, 46.04% id in 215 aa; leucine export protein LeuE 1576481..1577143 Burkholderia pseudomallei K96243 3094569 YP_107976.1 CDS carB NC_006350.1 1577195 1580449 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1577195..1580449 Burkholderia pseudomallei K96243 3092518 YP_107977.1 CDS greA NC_006350.1 1580568 1581044 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1580568..1581044 Burkholderia pseudomallei K96243 3093169 YP_107978.1 CDS BPSL1353 NC_006350.1 1581044 1581547 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1523 or rs03781 SWALL:Q8XZ81 (EMBL:AL646065) (155 aa) fasta scores: E(): 3.5e-30, 61.74% id in 149 aa; hypothetical protein 1581044..1581547 Burkholderia pseudomallei K96243 3094570 YP_107979.1 CDS BPSL1354 NC_006350.1 1581618 1582172 R Similar to Ralstonia solanacearum hypothetical protein rsc1524 or rs03780 SWALL:Q8XZ80 (EMBL:AL646065) (165 aa) fasta scores: E(): 4.7e-20, 59.77% id in 179 aa, and to the N-terminal region of Neisseria meningitidis hypothetical protein nma1009 SWALL:Q9JV39 (EMBL:AL162754) (94 aa) fasta scores: E(): 3.7e-12, 50.56% id in 89 aa; hypothetical protein complement(1581618..1582172) Burkholderia pseudomallei K96243 3092734 YP_107980.1 CDS BPSL1355 NC_006350.1 1582366 1583028 D Similar to Escherichia coli, and Escherichia coli O157:H7 ribosomal RNA large subunit methyltransferase J RrmJ or FtsJ or MrsF or b3179 or z4541 or ecs4058 SWALL:RRMJ_ECOLI (SWALL:P28692) (209 aa) fasta scores: E(): 9.2e-16, 43.96% id in 207 aa, and to Ralstonia solanacearum probable ribosomal RNA large subunit methyltransferase J rsc1525 or rs04752 SWALL:Q8XZ79 (EMBL:AL646065) (221 aa) fasta scores: E(): 3e-64, 78.02% id in 223 aa; ribosomal RNA large subunit methyltransferase 1582366..1583028 Burkholderia pseudomallei K96243 3092735 YP_107981.1 CDS ftsH NC_006350.1 1583196 1585082 D Similar to Escherichia coli cell division protein HflB or FtsH or MrsC or TolZ or b3178 SWALL:FTSH_ECOLI (SWALL:P28691) (644 aa) fasta scores: E(): 2.3e-120, 58% id in 631 aa, and to Ralstonia solanacearum probable ATP-dependent zinc metallopeptidase rsc1526 or rs03778 SWALL:Q8XZ78 (EMBL:AL646065) (628 aa) fasta scores: E(): 2.4e-178, 82.06% id in 630 aa; FtsH endopeptidase 1583196..1585082 Burkholderia pseudomallei K96243 3093403 YP_107982.1 CDS folP NC_006350.1 1585195 1586085 D Similar to Escherichia coli dihydropteroate synthase FolP or DhpS or b3177 SWALL:DHPS_ECOLI (SWALL:P26282) (282 aa) fasta scores: E(): 2.4e-41, 48.9% id in 274 aa, and to Haemophilus influenzae dihydropteroate synthase FolP SWALL:Q93T09 (EMBL:AF378241) (273 aa) fasta scores: E(): 3.1e-44, 50.74% id in 270 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; dihydropteroate synthase 1585195..1586085 Burkholderia pseudomallei K96243 3092153 YP_107983.1 CDS glmM NC_006350.1 1586111 1587469 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1586111..1587469 Burkholderia pseudomallei K96243 3093482 YP_107984.1 CDS pstS NC_006350.1 1587905 1588933 D Similar to Escherichia coli phosphate-binding periplasmic protein precursor PstS or PhoS or b3728 SWALL:PSTS_ECOLI (SWALL:P06128) (346 aa) fasta scores: E(): 2.5e-86, 63.26% id in 343 aa, and to Ralstonia solanacearum probable phosphate-binding periplasmic rsc1529 or rs03775 SWALL:Q8XZ75 (EMBL:AL646065) (343 aa) fasta scores: E(): 2.2e-97, 71.84% id in 341 aa; phosphate transport system, substrate-binding exported periplasmic protein 1587905..1588933 Burkholderia pseudomallei K96243 3093141 YP_107985.1 CDS pstC NC_006350.1 1589040 1590026 D part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 1589040..1590026 Burkholderia pseudomallei K96243 3092860 YP_107986.2 CDS pstA NC_006350.1 1590023 1590916 D Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 1590023..1590916 Burkholderia pseudomallei K96243 3092903 YP_107987.1 CDS pstB NC_006350.1 1590932 1591780 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1590932..1591780 Burkholderia pseudomallei K96243 3092904 YP_107988.1 CDS BPSL1363 NC_006350.1 1591800 1592504 D Similar to Escherichia coli phosphate transport system protein PhoU or NmpA or b3724 SWALL:PHOU_ECOLI (SWALL:P07656) (241 aa) fasta scores: E(): 7.3e-32, 46.28% id in 229 aa, and to Ralstonia solanacearum probable phosphate transport system protein rsc1533 or rs03771 SWALL:Q8XZ71 (EMBL:AL646065) (235 aa) fasta scores: E(): 6.6e-53, 67.09% id in 231 aa; phosphate transport system-like protein 1591800..1592504 Burkholderia pseudomallei K96243 3093483 YP_107989.1 CDS phoB NC_006350.1 1592533 1593234 D Similar to Escherichia coli, and Escherichia coli O157:H7 phosphate regulon transcriptional regulatory protein PhoB or b0399 or z0497 or ecs0449 SWALL:PHOB_ECOLI (SWALL:P08402) (229 aa) fasta scores: E(): 3.8e-51, 57.82% id in 230 aa, and to Ralstonia solanacearum probable phosphate regulon two-component response regulator transcription regulator protein rsc1534 or rs03769 SWALL:Q8XZ70 (EMBL:AL646065) (237 aa) fasta scores: E(): 1.6e-75, 83.33% id in 234 aa; phosphate regulon two-component system response regulator 1592533..1593234 Burkholderia pseudomallei K96243 3094079 YP_107990.1 CDS BPSL1365 NC_006350.1 1593304 1594614 D Similar to Escherichia coli phosphate regulon sensor protein PhoR or NmpB or b0400 SWALL:PHOR_ECOLI (SWALL:P08400) (431 aa) fasta scores: E(): 1.5e-50, 36.83% id in 429 aa, and to Ralstonia solanacearum probable phosphate regulon two-component sensor kinase transcription regulator protein rsc1535 or rs03768 SWALL:Q8XZ69 (EMBL:AL646065) (443 aa) fasta scores: E(): 1.5e-104, 61.89% id in 433 aa; phosphate regulon two-component system sensor kinase 1593304..1594614 Burkholderia pseudomallei K96243 3093459 YP_107991.2 CDS ppk NC_006350.1 1594813 1597056 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(1594813..1597056) Burkholderia pseudomallei K96243 3093143 YP_107992.1 CDS BPSL1367 NC_006350.1 1597104 1598663 D Similar to Escherichia coli, and Escherichia coli O157:H7 exopolyphosphatase Ppx or b2502 or z3765 or ecs3364 SWALL:PPX_ECOLI (SWALL:P29014) (512 aa) fasta scores: E(): 1.7e-60, 37.7% id in 496 aa, and to Ralstonia solanacearum probable exopolyphosphatase rsc1537 or rs03765 SWALL:Q8XZ67 (EMBL:AL646065) (527 aa) fasta scores: E(): 5.1e-134, 67.64% id in 513 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; exopolyphosphatase 1597104..1598663 Burkholderia pseudomallei K96243 3093460 YP_107993.1 CDS BPSL1368 NC_006350.1 1598976 1599869 R hypothetical protein complement(1598976..1599869) Burkholderia pseudomallei K96243 3094861 YP_107994.1 CDS BPSL1369 NC_006350.1 1599935 1601008 D Similar to Rhizobium loti hypothetical protein mll6491 SWALL:Q989C0 (EMBL:AP003009) (328 aa) fasta scores: E(): 1.2e-20, 32.48% id in 314 aa; hypothetical protein 1599935..1601008 Burkholderia pseudomallei K96243 3094862 YP_107995.1 CDS BPSL1370 NC_006350.1 1601034 1601699 D Similar to Ralstonia solanacearum hypothetical protein rsc3377 or rs02651 SWALL:Q8XU17 (EMBL:AL646075) (170 aa) fasta scores: E(): 2.1e-09, 41.2% id in 182 aa. Note: this CDS is longer in its N-terminal region than most of its few database matches; hypothetical protein 1601034..1601699 Burkholderia pseudomallei K96243 3092501 YP_107996.1 CDS BPSL1371A NC_006350.1 1601862 1602416 D hypothetical protein 1601862..1602416 Burkholderia pseudomallei K96243 3092502 YP_107997.1 CDS BPSL1372 NC_006350.1 1603053 1603313 R hypothetical protein complement(1603053..1603313) Burkholderia pseudomallei K96243 3094435 YP_107998.1 CDS BPSL1373 NC_006350.1 1603310 1603720 R Similar to Ralstonia solanacearum hypothetical protein rsc2888 or rs00212 SWALL:Q8XVE3 (EMBL:AL646072) (152 aa) fasta scores: E(): 4.4e-19, 44.03% id in 134 aa. Note: This CDS is shorter in its N-terminal region than its significant database match; hypothetical protein complement(1603310..1603720) Burkholderia pseudomallei K96243 3094436 YP_107999.1 CDS BPSL1374 NC_006350.1 1604281 1604742 D Similar to Burkholderia thailandensis hypothetical protein SWALL:Q8VP92 (EMBL:AY063741) (153 aa) fasta scores: E(): 1.4e-53, 94.77% id in 153 aa, and to Ralstonia solanacearum probable hydrolase rsc1539 or rs03763 SWALL:Q8XZ65 (EMBL:AL646065) (157 aa) fasta scores: E(): 5.8e-27, 53.45% id in 159 aa; hydrolase 1604281..1604742 Burkholderia pseudomallei K96243 3093970 YP_108000.1 CDS BPSL1375 NC_006350.1 1604894 1605712 D Similar to Burkholderia thailandensis hypothetical protein SWALL:Q8VP91 (EMBL:AY063741) (272 aa) fasta scores: E(): 1.5e-112, 98.89% id in 272 aa, and to Ralstonia solanacearum hypothetical protein rsc1538 or rs03764 SWALL:Q8XZ66 (EMBL:AL646065) (278 aa) fasta scores: E(): 7.1e-67, 65.7% id in 277 aa; hypothetical protein 1604894..1605712 Burkholderia pseudomallei K96243 3093971 YP_108001.1 CDS BPSL1376 NC_006350.1 1606063 1606326 R hypothetical protein complement(1606063..1606326) Burkholderia pseudomallei K96243 3094812 YP_108002.1 CDS BPSL1377 NC_006350.1 1606401 1606592 D lipoprotein 1606401..1606592 Burkholderia pseudomallei K96243 3094813 YP_108003.1 CDS BPSL1378 NC_006350.1 1606854 1608245 R Similar to Ralstonia solanacearum probable DNA-damage-inducible F transmembrane protein rsp0283 or rs03681 SWALL:Q8XT32 (EMBL:AL646077) (457 aa) fasta scores: E(): 6.8e-99, 61.35% id in 458 aa, and to Escherichia coli DNA-damage-inducible protein F DinF or b4044 SWALL:DINF_ECOLI (SWALL:P28303) (459 aa) fasta scores: E(): 2e-55, 42.99% id in 414 aa; membrane protein (DNA-damage-inducible protein) complement(1606854..1608245) Burkholderia pseudomallei K96243 3093285 YP_108004.1 CDS BPSL1379 NC_006350.1 1608253 1608603 R Similar to Pseudomonas aeruginosa hypothetical protein pa1075 SWALL:Q9I4Q4 (EMBL:AE004539) (105 aa) fasta scores: E(): 1.1e-16, 54.25% id in 94 aa; hypothetical protein complement(1608253..1608603) Burkholderia pseudomallei K96243 3093286 YP_108005.1 CDS BPSL1380 NC_006350.1 1608868 1610535 R Similar to Bacillus subtilis acetyl-coenzyme A synthetase AcsA SWALL:ACSA_BACSU (SWALL:P39062) (572 aa) fasta scores: E(): 5.7e-54, 34.63% id in 540 aa, and to Rhizobium loti acetyl-CoA synthetase mll6017 SWALL:Q98AG0 (EMBL:AP003008) (562 aa) fasta scores: E(): 8.3e-119, 55.51% id in 553 aa; acetyl-CoA synthetase complement(1608868..1610535) Burkholderia pseudomallei K96243 3093550 YP_108006.1 CDS BPSL1381 NC_006350.1 1610849 1611562 R Similar to Salmonella typhi possible lipoprotein sty3194 SWALL:Q8Z3Y0 (EMBL:AL627277) (250 aa) fasta scores: E(): 2.7e-27, 47.05% id in 221 aa, and to Pseudomonas aeruginosa lipoprotein NlpD/LppB homolog precursor pa3623 SWALL:NLPD_PSEAE (SWALL:P45682) (297 aa) fasta scores: E(): 1.1e-21, 43.98% id in 241 aa; peptidase complement(1610849..1611562) Burkholderia pseudomallei K96243 3093551 YP_108007.1 CDS BPSL1382 NC_006350.1 1611847 1612755 R Similar to Ralstonia solanacearum hypothetical protein rsc1585 or rs03937 SWALL:Q8XZ21 (EMBL:AL646065) (312 aa) fasta scores: E(): 5.3e-59, 51.75% id in 313 aa, and to Rhizobium loti hypothetical protein mlr0411 SWALL:Q98MW4 (EMBL:AP002994) (294 aa) fasta scores: E(): 3.7e-12, 30.71% id in 306 aa; hypothetical protein complement(1611847..1612755) Burkholderia pseudomallei K96243 3094293 YP_108008.1 CDS uppP NC_006350.1 1613303 1614133 D phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1613303..1614133 Burkholderia pseudomallei K96243 3094294 YP_108009.1 CDS BPSL1385 NC_006350.1 1615048 1615761 R Low similarity to Pseudomonas aeruginosa hypothetical protein pa3908 SWALL:Q9HXA5 (EMBL:AE004808) (239 aa) fasta scores: E(): 6e-06, 24.46% id in 233 aa; hypothetical protein complement(1615048..1615761) Burkholderia pseudomallei K96243 3094348 YP_108010.1 CDS BPSL1386 NC_006350.1 1615770 1616276 R Partially similar to Pseudomonas aeruginosa hypothetical protein pa3907 SWALL:Q9HXA6 (EMBL:AE004808) (261 aa) fasta scores: E(): 1.7e-05, 27.05% id in 170 aa. Note: 10 first residues overlap with the upstream CDS; hypothetical protein complement(1615770..1616276) Burkholderia pseudomallei K96243 3094349 YP_108011.1 CDS BPSL1387 NC_006350.1 1616248 1616697 R Similar to the N-terminal part of Pseudomonas aeruginosa hypothetical protein pa3906 SWALL:Q9HXA7 (EMBL:AE004808) (127 aa) fasta scores: E(): 0.0096, 34.31% id in 102 aa. Note: Overlaps with the downstream CDS in 10 residues; hypothetical protein complement(1616248..1616697) Burkholderia pseudomallei K96243 3094370 YP_108012.1 CDS BPSL1388 NC_006350.1 1616714 1617217 R Low similarity to Pseudomonas aeruginosa hypothetical protein pa3905 SWALL:Q9HXA8 (EMBL:AE004808) (175 aa) fasta scores: E(): 0.0056, 32.71% id in 107 aa; hypothetical protein complement(1616714..1617217) Burkholderia pseudomallei K96243 3094371 YP_108013.1 CDS BPSL1390 NC_006350.1 1617923 1618318 R hypothetical protein complement(1617923..1618318) Burkholderia pseudomallei K96243 3091640 YP_108014.1 CDS BPSL1392 NC_006350.1 1618835 1619068 R hypothetical protein complement(1618835..1619068) Burkholderia pseudomallei K96243 3094026 YP_108015.1 CDS BPSL1393 NC_006350.1 1619144 1619650 R Similar to Streptomyces violaceus streptavidin V2 precursor SWALL:SAV2_STRVL (SWALL:Q53533) (183 aa) fasta scores: E(): 1e-07, 33.11% id in 154 aa, and to Streptomyces avidinii streptavidin precursor SWALL:SAV_STRAV (SWALL:P22629) (183 aa) fasta scores: E(): 4.6e-07, 30.48% id in 164 aa; exported avidin family protein complement(1619144..1619650) Burkholderia pseudomallei K96243 3093398 YP_108016.1 CDS BPSL1394 NC_006350.1 1620853 1621476 R Similar to the plasmid borne Pseudomonas putida nuclease SWALL:Q8VMF9 (EMBL:AJ344068) (185 aa) fasta scores: E(): 2.7e-30, 54.19% id in 155 aa, and to Escherichia coli, and Salmonella typhimurium endonuclease Nuc SWALL:Q46707 (EMBL:U09868) (177 aa) fasta scores: E(): 8e-28, 47.64% id in 170 aa; exported endonuclease complement(1620853..1621476) Burkholderia pseudomallei K96243 3093399 YP_108017.1 CDS BPSL1395 NC_006350.1 1621671 1622822 R Similar to Pseudomonas aeruginosa probable acetylpolyamine aminohydrolase pa3774 SWALL:Q9HXM1 (EMBL:AE004796) (380 aa) fasta scores: E(): 2.2e-99, 66.12% id in 366 aa, and to Rhizobium loti hypothetical protein mlr7469 SWALL:Q985Y7 (EMBL:AP003011) (308 aa) fasta scores: E(): 6.8e-35, 39.86% id in 291 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; histone deacetylase complement(1621671..1622822) Burkholderia pseudomallei K96243 3094782 YP_108018.1 CDS BPSL1396 NC_006350.1 1622837 1624030 R Similar to Pseudomonas aeruginosa hypothetical protein pa3773 SWALL:Q9HXM2 (EMBL:AE004796) (385 aa) fasta scores: E(): 2e-54, 49.73% id in 374 aa, and to Streptomyces coelicolor transmembrane efflux protein sco2545 or scc77.12 SWALL:Q9RDE6 (EMBL:AL136503) (449 aa) fasta scores: E(): 5.6e-12, 29.58% id in 382 aa; hypothetical protein complement(1622837..1624030) Burkholderia pseudomallei K96243 3094783 YP_108019.1 CDS BPSL1397 NC_006350.1 1624054 1625121 R Similar to Ralstonia solanacearum porin signal peptide protein rsc2760 or rs00094 SWALL:Q8XVR9 (EMBL:AL646071) (353 aa) fasta scores: E(): 2e-21, 31.74% id in 356 aa, and to Neisseria gonorrhoeae major outer membrane protein P.IA precursor PorA SWALL:OMA_NEIGO (SWALL:P05430) (326 aa) fasta scores: E(): 4.8e-08, 27.58% id in 319 aa; porin signal peptide protein complement(1624054..1625121) Burkholderia pseudomallei K96243 3094565 YP_108020.1 CDS BPSL1398 NC_006350.1 1625452 1626600 D C-terminal region is similar to Pseudomonas aeruginosa probable transcriptional regulator pa3771 SWALL:Q9HXM4 (EMBL:AE004796) (325 aa) fasta scores: E(): 2.4e-19, 29.81% id in 332 aa, and to the C-terminal region to Xanthomonas axonopodis two-component system regulatory protein xac0136 SWALL:AAM35028 (EMBL:AE011636) (210 aa) fasta scores: E(): 0.011, 30.35% id in 112 aa. Possible alternative translational start site; GerE family transcriptional regulator 1625452..1626600 Burkholderia pseudomallei K96243 3094566 YP_108021.1 CDS BPSL1399 NC_006350.1 1626699 1627685 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 1626699..1627685 Burkholderia pseudomallei K96243 3093239 YP_108022.1 CDS BPSL1400 NC_006350.1 1628075 1628524 R Similar to Rhizobium loti transcriptional regulator mll8302 SWALL:Q983J5 (EMBL:AP003013) (146 aa) fasta scores: E(): 1.7e-10, 35.2% id in 125 aa, and to Xanthomonas campestris transcriptional regulator MarR/EmrR family xcc0435 SWALL:AAM39753 (EMBL:AE012141) (162 aa) fasta scores: E(): 2.6e-10, 30.88% id in 136 aa, and weakly to Escherichia coli multiple antibiotic resistance protein MarR or SoxQ or CfxB or InaR or b1530 SWALL:MARR_ECOLI (SWALL:P27245) (144 aa) fasta scores: E(): 0.00063, 25.98% id in 127 aa; MarR family transcriptional regulator complement(1628075..1628524) Burkholderia pseudomallei K96243 3093240 YP_108023.1 CDS BPSL1401 NC_006350.1 1628627 1629790 R Similar to Pseudomonas aeruginosa hypothetical protein pa1052 SWALL:Q9I4S2 (EMBL:AE004537) (381 aa) fasta scores: E(): 5.2e-50, 50.13% id in 377 aa, and to Bacillus subtilis glycerate kinase GlxK or S14A SWALL:GRK_BACSU (SWALL:P42100) (382 aa) fasta scores: E(): 1.1e-38, 40.1% id in 379 aa; kinase complement(1628627..1629790) Burkholderia pseudomallei K96243 3092186 YP_108024.1 CDS tig NC_006350.1 1630243 1631592 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1630243..1631592 Burkholderia pseudomallei K96243 3092748 YP_108025.1 CDS clpP NC_006350.1 1631727 1632380 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1631727..1632380 Burkholderia pseudomallei K96243 3094271 YP_108026.1 CDS clpX NC_006350.1 1632520 1633812 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1632520..1633812 Burkholderia pseudomallei K96243 3093205 YP_108027.1 CDS lon NC_006350.1 1634008 1636425 D Similar to Escherichia coli ATP-dependent protease La Lon or CapR or Deg or Muc or LopA or b0439 SWALL:LON_ECOLI (SWALL:P08177) (784 aa) fasta scores: E(): 6.1e-180, 69.7% id in 779 aa, and to Ralstonia solanacearum probable ATP-dependent protease La protein rsc1713 or rs02903 SWALL:Q8XYP5 (EMBL:AL646066) (806 aa) fasta scores: E(): 0, 87.96% id in 806 aa; ATP-dependent protease 1634008..1636425 Burkholderia pseudomallei K96243 3092784 YP_108028.1 CDS BPSL1406 NC_006350.1 1637455 1637784 R hypothetical protein complement(1637455..1637784) Burkholderia pseudomallei K96243 3092187 YP_108029.1 CDS BPSL1406A NC_006350.1 1637967 1638185 D hypothetical protein 1637967..1638185 Burkholderia pseudomallei K96243 3094610 YP_108030.1 CDS BPSL1407 NC_006350.1 1638260 1638676 D hypothetical protein 1638260..1638676 Burkholderia pseudomallei K96243 3094611 YP_108031.1 CDS BPSL1409 NC_006350.1 1639796 1640008 D Very low similarity to the C-terminal region of Thermoanaerobacter tengcongensis hypothetical protein tte0299 SWALL:Q8RCV6 (EMBL:AE013003) (110 aa) fasta scores: E(): 0.53, 40.47% id in 42 aa; hypothetical protein 1639796..1640008 Burkholderia pseudomallei K96243 3092361 YP_108032.1 CDS BPSL1410 NC_006350.1 1640747 1642681 D Similar to Escherichia coli peptidyl-prolyl cis-trans isomerase D PpiD or b0441 SWALL:PPID_ECOLI (SWALL:P77241) (623 aa) fasta scores: E(): 9.7e-16, 28.61% id in 650 aa, and to Ralstonia solanacearum probable peptidyl-prolyl cis-trans isomerase transmembrane protein rsc1715 or rs02886 SWALL:Q8XYP3 (EMBL:AL646066) (648 aa) fasta scores: E(): 7.9e-99, 46.59% id in 646 aa; peptidyl-prolyl cis-trans isomerase 1640747..1642681 Burkholderia pseudomallei K96243 3094072 YP_108033.1 CDS BPSL1411 NC_006350.1 1643189 1643863 R Similar to Ralstonia solanacearum probable esterase signal peptide protein rsc1717 or rs02907 SWALL:Q8XYP1 (EMBL:AL646066) (216 aa) fasta scores: E(): 5.8e-41, 59.29% id in 199 aa, and to Escherichia coli acyl-CoA thioesterase I precursor TesA or ApeA or PldC or b0494 SWALL:TESA_ECOLI (SWALL:P29679) (208 aa) fasta scores: E(): 6.8e-21, 42.3% id in 182 aa; acyl-CoA thioesterase complement(1643189..1643863) Burkholderia pseudomallei K96243 3094073 YP_108034.1 CDS BPSL1412 NC_006350.1 1643853 1644578 D Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1718 or rs02908 SWALL:Q8XYP0 (EMBL:AL646066) (236 aa) fasta scores: E(): 6.9e-47, 69.81% id in 222 aa, and to Escherichia coli lipoprotein releasing system ATP-binding protein LolD or b1117 SWALL:LOLD_ECOLI (SWALL:P75957) (233 aa) fasta scores: E(): 2.9e-28, 45.9% id in 220 aa; ABC transporter ATP-binding protein 1643853..1644578 Burkholderia pseudomallei K96243 3094076 YP_108035.1 CDS pgi NC_006350.1 1644934 1646556 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(1644934..1646556) Burkholderia pseudomallei K96243 3093521 YP_108036.1 CDS BPSL1414 NC_006350.1 1646659 1648254 R Similar to Ralstonia solanacearum hypothetical protein rsc1720 or rs02910 SWALL:Q8XYN8 (EMBL:AL646066) (531 aa) fasta scores: E(): 2.2e-50, 51.57% id in 508 aa, and to Pseudomonas aeruginosa hypothetical protein pa4949 SWALL:Q9HUL5 (EMBL:AE004907) (502 aa) fasta scores: E(): 1.4e-43, 40.94% id in 508 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein complement(1646659..1648254) Burkholderia pseudomallei K96243 3094077 YP_108037.1 CDS BPSL1415 NC_006350.1 1648302 1649606 R Similar to Escherichia coli, and Escherichia coli O157:H7 D-amino acid dehydrogenase small subunit DadA or DadR or b1189 or z1952 or ecs1684 SWALL:DADA_ECOLI (SWALL:P29011) (432 aa) fasta scores: E(): 1.4e-17, 27.89% id in 441 aa, and to Rhizobium leguminosarum D-amino acid dehydrogenase small subunit DadA SWALL:DADA_RHILV (SWALL:Q9RAE6) (416 aa) fasta scores: E(): 5.2e-24, 31.33% id in 434 aa; D-amino acid dehydrogenase small subunit complement(1648302..1649606) Burkholderia pseudomallei K96243 3093732 YP_108038.1 CDS purL NC_006350.1 1649862 1653932 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1649862..1653932 Burkholderia pseudomallei K96243 3092591 YP_108039.1 CDS BPSL1417 NC_006350.1 1653937 1654470 D Similar to Rhizobium meliloti hypothetical protein r01655 or smc00230 SWALL:Q92PS5 (EMBL:AL591788) (165 aa) fasta scores: E(): 1.6e-23, 47.56% id in 164 aa, and to Brucella melitensis acetyltransferase bmei0466 SWALL:Q8YIH8 (EMBL:AE009489) (169 aa) fasta scores: E(): 2.4e-23, 48.52% id in 169 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; acetyltransferase 1653937..1654470 Burkholderia pseudomallei K96243 3093733 YP_108040.1 CDS BPSL1418 NC_006350.1 1654568 1655347 R Similar to Ralstonia solanacearum isomerase rotamase signal peptide protein rsc1744 or rs02932 SWALL:Q8XYL4 (EMBL:AL646066) (255 aa) fasta scores: E(): 9.3e-38, 46.69% id in 257 aa, and to Brucella melitensis peptidyl-prolyl cis-trans isomerase bmei0123 SWALL:Q8YJG0 (EMBL:AE009455) (331 aa) fasta scores: E(): 4.7e-18, 33.46% id in 263 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; exported isomerase complement(1654568..1655347) Burkholderia pseudomallei K96243 3092865 YP_108041.1 CDS BPSL1419 NC_006350.1 1655372 1655686 R Similar to Ralstonia solanacearum hypothetical protein rsc1745 or rs02933 SWALL:Q8XYL3 (EMBL:AL646066) (94 aa) fasta scores: E(): 1.1e-14, 61.95% id in 92 aa, and to Xanthomonas axonopodis hypothetical protein xac2314 SWALL:AAM37167 (EMBL:AE011869) (89 aa) fasta scores: E(): 7.2e-13, 57.64% id in 85 aa; hypothetical protein complement(1655372..1655686) Burkholderia pseudomallei K96243 3092866 YP_108042.1 CDS BPSL1420 NC_006350.1 1655689 1656219 R Involved in cell division; probably involved in intracellular septation; intracellular septation protein A complement(1655689..1656219) Burkholderia pseudomallei K96243 3094013 YP_108043.1 CDS msrB NC_006350.1 1656312 1656743 R Similar to the C-terminal region of Streptococcus gordonii Challis peptide methionine sulfoxide reductase MsrA/MsrB MsrAB or MsrA SWALL:MSAB_STRGC (SWALL:Q9LAM9) (311 aa) fasta scores: E(): 1e-23, 55.22% id in 134 aa, and to Ralstonia solanacearum peptide methionine sulfoxide reductase rsc1747 or rs02935 SWALL:MSRB_RALSO (SWALL:Q8XYL1) (128 aa) fasta scores: E(): 1.9e-33, 69.1% id in 123 aa; peptide methionine sulfoxide reductase complement(1656312..1656743) Burkholderia pseudomallei K96243 3091857 YP_108044.1 CDS BPSL1422 NC_006350.1 1656794 1658371 R Similar to Ralstonia solanacearum hypothetical protein rsc1748 or rs02936 SWALL:Q8XYL0 (EMBL:AL646066) (525 aa) fasta scores: E(): 1.8e-117, 62.35% id in 518 aa, and to Escherichia coli hypothetical protein YdiU or b1706 SWALL:YDIU_ECOLI (SWALL:P77649) (478 aa) fasta scores: E(): 6.1e-54, 48.35% id in 486 aa; hypothetical protein complement(1656794..1658371) Burkholderia pseudomallei K96243 3094014 YP_108045.1 CDS BPSL1423 NC_006350.1 1658487 1660127 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1658487..1660127 Burkholderia pseudomallei K96243 3094023 YP_108046.1 CDS BPSL1424 NC_006350.1 1660379 1662463 D Similar to Ralstonia solanacearum probable trifunctional: enoyl-CoA hydratase and delta3-cis-delta2-trans-enoyl-CoA isomerase and 3-hydroxyacyl-CoA dehydrogenase oxidoreductase rsc1759 or rs02946 SWALL:Q8XYJ9 (EMBL:AL646066) (706 aa) fasta scores: E(): 2.4e-192, 74.6% id in 693 aa, and to Escherichia coli fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase] FadB or OldB or b3846 SWALL:FADB_ECOLI (SWALL:P21177) (729 aa) fasta scores: E(): 2.1e-55, 32.98% id in 670 aa; fatty acid degradation protein 1660379..1662463 Burkholderia pseudomallei K96243 3094024 YP_108047.1 CDS BPSL1425 NC_006350.1 1662505 1663143 D Similar to Escherichia coli pyrazinamidase/nicotinamidase PncA or Nam or b1768 SWALL:PNCA_ECOLI (SWALL:P21369) (213 aa) fasta scores: E(): 2.6e-25, 43.07% id in 195 aa, and to Ralstonia solanacearum probable bifunctional protein: pyrazinamidase and nicotinamidase hydrolase rsc1760 or rs02947 SWALL:Q8XYJ8 (EMBL:AL646066) (210 aa) fasta scores: E(): 3e-60, 71.56% id in 204 aa; pyrazinamidase/nicotinamidase 1662505..1663143 Burkholderia pseudomallei K96243 3094081 YP_108048.1 CDS BPSL1426 NC_006350.1 1663202 1664380 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1663202..1664380 Burkholderia pseudomallei K96243 3094082 YP_108049.1 CDS BPSL1427 NC_006350.1 1664742 1665281 R hypothetical protein complement(1664742..1665281) Burkholderia pseudomallei K96243 3094105 YP_108050.1 CDS BPSL1428 NC_006350.1 1665958 1666272 D Similar to Chlorobium tepidum TLS hypothetical protein ct1263 SWALL:AAM72493 (EMBL:AE012886) (100 aa) fasta scores: E(): 3.5e-15, 48.98% id in 98 aa, and to Clostridium perfringens hypothetical protein cpe0853 SWALL:Q8XM37 (EMBL:AP003188) (100 aa) fasta scores: E(): 1e-10, 44% id in 100 aa; hypothetical protein 1665958..1666272 Burkholderia pseudomallei K96243 3094106 YP_108051.1 CDS BPSL1429 NC_006350.1 1666269 1666751 D Similar to Ralstonia solanacearum hypothetical protein rsc1764 or rs02951 SWALL:Q8XYJ4 (EMBL:AL646066) (144 aa) fasta scores: E(): 1.9e-25, 57.48% id in 127 aa, and to Pyrobaculum aerophilum hypothetical protein pae1329 SWALL:Q8ZXD8 (EMBL:AE009816) (147 aa) fasta scores: E(): 1.5e-10, 38.71% id in 124 aa; hypothetical protein 1666269..1666751 Burkholderia pseudomallei K96243 3094677 YP_108052.1 CDS BPSL1430 NC_006350.1 1666843 1667841 D Similar to Escherichia coli NADP-dependent oxidoreductase YncB or b1449 SWALL:YNCB_ECOLI (SWALL:P76113) (353 aa) fasta scores: E(): 4.1e-51, 46.56% id in 335 aa, and to Ralstonia solanacearum probable NADP-dependent oxidoreductase oxidoreductase rsc1766 or rs02953 SWALL:Q8XYJ2 (EMBL:AL646066) (336 aa) fasta scores: E(): 4.3e-82, 66.07% id in 336 aa; oxidoreductase 1666843..1667841 Burkholderia pseudomallei K96243 3094678 YP_108053.1 CDS BPSL1431 NC_006350.1 1667911 1668906 D Similar to Alcaligenes eutrophus esterase/lipase SWALL:Q44019 (EMBL:L36817) (364 aa) fasta scores: E(): 4.5e-74, 60.62% id in 320 aa, and to Ralstonia solanacearum probable esterase/lipase rsc1772 or rs02959 SWALL:Q8XYI6 (EMBL:AL646066) (344 aa) fasta scores: E(): 6e-69, 57.72% id in 317 aa; esterase/lipase 1667911..1668906 Burkholderia pseudomallei K96243 3094698 YP_108054.1 CDS BPSL1432 NC_006350.1 1669270 1669710 D Similar to Ralstonia solanacearum hypothetical protein rsc1774 or rs02961 SWALL:Q8XYI4 (EMBL:AL646066) (148 aa) fasta scores: E(): 1.4e-16, 46.04% id in 139 aa, and to Halobacterium sp. vng1398C SWALL:Q9HPZ8 (EMBL:AE005058) (147 aa) fasta scores: E(): 1e-13, 45.11% id in 133 aa; acetyltransferase 1669270..1669710 Burkholderia pseudomallei K96243 3094699 YP_108055.1 CDS BPSL1433 NC_006350.1 1669746 1670597 R Similar to Ralstonia solanacearum signal peptide protein rsc1780 or rs04168 SWALL:Q8XYH8 (EMBL:AL646066) (272 aa) fasta scores: E(): 6.7e-31, 47.51% id in 261 aa, and to Pseudomonas aeruginosa hypothetical protein pa0339 SWALL:Q9I6F4 (EMBL:AE004471) (251 aa) fasta scores: E(): 2.2e-20, 51.25% id in 240 aa; hypothetical protein complement(1669746..1670597) Burkholderia pseudomallei K96243 3092672 YP_108056.1 CDS BPSL1434 NC_006350.1 1670668 1671621 R Similar to Ralstonia solanacearum hypothetical protein rsc1782 or rs04173 SWALL:Q8XYH6 (EMBL:AL646066) (346 aa) fasta scores: E(): 1.2e-52, 54.04% id in 309 aa, and to Escherichia coli unknown protein from 2d-page YgfZ or b2898 SWALL:UP14_ECOLI (SWALL:P39179) (325 aa) fasta scores: E(): 5.8e-18, 28.33% id in 307 aa. Note: This CDS is shorter in its N-terminal region than some of its database matches; hypothetical protein complement(1670668..1671621) Burkholderia pseudomallei K96243 3092673 YP_108057.1 CDS BPSL1435 NC_006350.1 1671793 1672812 D Similar to Ralstonia solanacearum hypothetical protein rsc1783 or rs06023 SWALL:Q8XYH5 (EMBL:AL646066) (377 aa) fasta scores: E(): 3.4e-76, 59.88% id in 339 aa, and to Yersinia pestis exported protein ypo1604 SWALL:Q8ZFT1 (EMBL:AJ414149) (341 aa) fasta scores: E(): 4e-39, 38.73% id in 333 aa. Note: This CDS is shorter in its N-terminal region than some of its database matches; lipoprotein 1671793..1672812 Burkholderia pseudomallei K96243 3094599 YP_108058.1 CDS tmk NC_006350.1 1672813 1673433 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1672813..1673433 Burkholderia pseudomallei K96243 3094600 YP_108059.1 CDS BPSL1437 NC_006350.1 1673453 1674487 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1673453..1674487 Burkholderia pseudomallei K96243 3093305 YP_108060.1 CDS BPSL1438 NC_006350.1 1674530 1675036 D Similar to Anabaena sp. hypothetical protein alr4468 SWALL:Q8YNU3 (EMBL:AP003596) (163 aa) fasta scores: E(): 4e-35, 56.17% id in 162 aa, and to Escherichia coli hypothetical acetyltransferase YncA or b1448 SWALL:YNCA_ECOLI (SWALL:P76112) (172 aa) fasta scores: E(): 8.3e-11, 32.71% id in 162 aa; acetyltransferase 1674530..1675036 Burkholderia pseudomallei K96243 3093306 YP_108061.1 CDS BPSL1439 NC_006350.1 1675112 1675921 D Similar to Ralstonia solanacearum hypothetical protein rsc1787 or rs04186 SWALL:Q8XYH1 (EMBL:AL646066) (267 aa) fasta scores: E(): 5.7e-67, 64.88% id in 262 aa, and to Escherichia coli, and Escherichia coli O157:H7 deoxyribonuclease YcfH or b1100 or z1739 or ecs1478 SWALL:YCFH_ECOLI (SWALL:P37346) (265 aa) fasta scores: E(): 2.1e-35, 45.48% id in 266 aa; deoxyribonuclease 1675112..1675921 Burkholderia pseudomallei K96243 3092237 YP_108062.1 CDS BPSL1440 NC_006350.1 1675932 1676660 D Similar to Ralstonia solanacearum probable ankyrin repeat harboring signal peptide protein rsc1788 or rs04187 SWALL:Q8XYH0 (EMBL:AL646066) (291 aa) fasta scores: E(): 9.2e-29, 45.74% id in 223 aa, and to the N-terminal region of Oryza sativa ankyrin osjnba0040e01.26 SWALL:Q9AUW0 (EMBL:AC079887) (252 aa) fasta scores: E(): 3.7e-09, 33% id in 203 aa. Note: Most of the database matches in this CDS are to the N-terminal region of ankyrin-related eukaryotic proteins; hypothetical protein 1675932..1676660 Burkholderia pseudomallei K96243 3092238 YP_108063.1 CDS BPSL1441 NC_006350.1 1676737 1677087 D hypothetical protein 1676737..1677087 Burkholderia pseudomallei K96243 3093249 YP_108064.1 CDS BPSL1442 NC_006350.1 1677154 1678341 D Similar to Xanthomonas axonopodis membrane protein xac1001 SWALL:AAM35884 (EMBL:AE011729) (375 aa) fasta scores: E(): 3.3e-62, 53.79% id in 329 aa, and to Streptomyces coelicolor membrane protein sco2070 or sc4a10.03 SWALL:Q9S2Y1 (EMBL:AL109663) (382 aa) fasta scores: E(): 2.5e-43, 41.39% id in 302 aa; hypothetical protein 1677154..1678341 Burkholderia pseudomallei K96243 3093250 YP_108065.1 CDS BPSL1443 NC_006350.1 1678454 1679764 D Similar to Pseudomonas aeruginosa hypothetical protein pa0787 SWALL:Q9I5F1 (EMBL:AE004513) (387 aa) fasta scores: E(): 2.7e-98, 69.92% id in 389 aa, and to Rhizobium meliloti hypothetical protein r03044 or smc02491 SWALL:Q92JU6 (EMBL:AL591792) (378 aa) fasta scores: E(): 2.5e-25, 35.45% id in 378 aa. Note: this CDS is longer in its N-terminal region than most of its database matches. Possible alternative start codon at residue 45; hypothetical protein 1678454..1679764 Burkholderia pseudomallei K96243 3094297 YP_108066.1 CDS BPSL1444 NC_006350.1 1680141 1681205 D Similar to Rhizobium meliloti hypothetical sugar transferase smb20117 rb0117 or smb20117 SWALL:Q92X45 (EMBL:AL603642) (366 aa) fasta scores: E(): 3.5e-74, 59.94% id in 347 aa, and to Chlorobium tepidum TLS glycosyl transferase, group 1 family protein ct0839 SWALL:AAM72075 (EMBL:AE012851) (356 aa) fasta scores: E(): 2.2e-61, 47.95% id in 342 aa; sugar transferase 1680141..1681205 Burkholderia pseudomallei K96243 3094298 YP_108067.1 CDS BPSL1445 NC_006350.1 1681413 1682000 R Similar to Ralstonia solanacearum lipoprotein rsc1878 or rs03438 SWALL:Q8XY85 (EMBL:AL646067) (200 aa) fasta scores: E(): 1.8e-34, 54.54% id in 198 aa, and to Xanthomonas axonopodis hypothetical protein xac4219 SWALL:AAM39054 (EMBL:AE012074) (301 aa) fasta scores: E(): 6.1e-06, 32.3% id in 130 aa; lipoprotein complement(1681413..1682000) Burkholderia pseudomallei K96243 3092363 YP_108068.1 CDS BPSL1446 NC_006350.1 1682238 1682750 R No significant database matches. C-terminal region with high content in proline residues; hypothetical protein complement(1682238..1682750) Burkholderia pseudomallei K96243 3092364 YP_108069.1 CDS BPSL1447 NC_006350.1 1682926 1683216 R Similar to Pseudomonas aeruginosa hypothetical protein pa4874 SWALL:Q9HUT9 (EMBL:AE004901) (138 aa) fasta scores: E(): 5.3e-12, 60.24% id in 83 aa; hypothetical protein complement(1682926..1683216) Burkholderia pseudomallei K96243 3091723 YP_108070.1 CDS ansB NC_006350.1 1683714 1684757 D Similar to Escherichia coli L-asparaginase II precursor AnsB or b2957 SWALL:ASG2_ECOLI (SWALL:P00805) (348 aa) fasta scores: E(): 3.5e-47, 47% id in 334 aa, and to Ralstonia solanacearum probable L-asparaginase II precursor signal peptide protein rsc1306 or rs02828 SWALL:Q8XZT9 (EMBL:AL646063) (367 aa) fasta scores: E(): 3.1e-56, 54.7% id in 351 aa; L-asparaginase II 1683714..1684757 Burkholderia pseudomallei K96243 3092601 YP_108071.1 CDS BPSL1449 NC_006350.1 1684933 1685403 R Similar to Ralstonia solanacearum hypothetical protein rsc2148 or rs01455 SWALL:Q8XXG6 (EMBL:AL646068) (160 aa) fasta scores: E(): 5e-19, 46.25% id in 160 aa, and to Escherichia coli unknown protein from 2D-PAGE YgaU or b2665 SWALL:UP04_ECOLI (SWALL:P39169) (148 aa) fasta scores: E(): 1.1e-12, 37.73% id in 159 aa; LysM domain/BON superfamily protein complement(1684933..1685403) Burkholderia pseudomallei K96243 3091724 YP_108072.1 CDS glxR NC_006350.1 1686162 1687067 R Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR or GlxB1 or b0509 SWALL:GLXR_ECOLI (SWALL:P77161) (292 aa) fasta scores: E(): 8.7e-65, 62.23% id in 286 aa, and to Rhizobium loti probable oxidoreductase mlr0254 SWALL:Q98N82 (EMBL:AP002994) (305 aa) fasta scores: E(): 8.4e-70, 65.3% id in 294 aa; 2-hydroxy-3-oxopropionate reductase complement(1686162..1687067) Burkholderia pseudomallei K96243 3093848 YP_108073.1 CDS hyi NC_006350.1 1687165 1687953 R Similar to Escherichia coli hydroxypyruvate isomerase Hyi or Gip or b0508 SWALL:HYI_ECOLI (SWALL:P30147) (258 aa) fasta scores: E(): 1.5e-54, 56.29% id in 254 aa, and to Ralstonia solanacearum probable hydroxypyruvate isomerase rsc3282 or rs02511 SWALL:Q8XUA9 (EMBL:AL646074) (260 aa) fasta scores: E(): 1.6e-69, 66.66% id in 261 aa; hydroxypyruvate isomerase complement(1687165..1687953) Burkholderia pseudomallei K96243 3092389 YP_108074.1 CDS gcl NC_006350.1 1688070 1689845 R catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase complement(1688070..1689845) Burkholderia pseudomallei K96243 3092122 YP_108075.1 CDS BPSL1453 NC_006350.1 1690008 1690919 D Similar to Ralstonia solanacearum probable transcription regulator protein rsc3280 or rs02509 SWALL:Q8XUB1 (EMBL:AL646074) (303 aa) fasta scores: E(): 1.9e-88, 69.96% id in 303 aa, and to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1065 SWALL:Q8YB36 (EMBL:AE009739) (325 aa) fasta scores: E(): 8.3e-40, 40.39% id in 302 aa; LysR family transcriptional regulator 1690008..1690919 Burkholderia pseudomallei K96243 3093334 YP_108076.1 CDS BPSL1454 NC_006350.1 1691058 1691483 R Low similarity to Ralstonia solanacearum cytochrome C oxidase polypeptide II oxidoreductase rsp1653 or rs02212 SWALL:Q8XPI7 (EMBL:AL646086) (125 aa) fasta scores: E(): 3e-19, 58.47% id in 118 aa, and to Thermus thermophilus cytochrome C oxidase polypeptide II CbaB or CtaC SWALL:COX2_THETH (SWALL:P98052) (168 aa) fasta scores: E(): 0.00023, 30.23% id in 86 aa; cytochrome C oxidase complement(1691058..1691483) Burkholderia pseudomallei K96243 3093335 YP_108077.1 CDS BPSL1455 NC_006350.1 1691494 1692414 R Similar to Ralstonia solanacearum hypothetical protein rsp1652 or rs02211 SWALL:Q8XPI8 (EMBL:AL646086) (309 aa) fasta scores: E(): 1.5e-79, 69.9% id in 299 aa, and to Agrobacterium tumefaciens hypothetical protein atu2243 or agr_c_4081 SWALL:Q8UD84 (EMBL:AE009174) (291 aa) fasta scores: E(): 2.6e-08, 30.14% id in 209 aa; hypothetical protein complement(1691494..1692414) Burkholderia pseudomallei K96243 3094551 YP_108078.1 CDS BPSL1456 NC_006350.1 1692620 1693327 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1692620..1693327 Burkholderia pseudomallei K96243 3094552 YP_108079.1 CDS BPSL1457 NC_006350.1 1693317 1694507 D C-terminal region similar to Ralstonia solanacearum transmembrane protein rsp1650 or rs02209 SWALL:Q8XPJ0 (EMBL:AL646086) (276 aa) fasta scores: E(): 6.9e-20, 46.89% id in 209 aa, and to Rhizobium loti hypothetical protein mlr3808 SWALL:Q98FE7 (EMBL:AP003002) (301 aa) fasta scores: E(): 1.3e-15, 34.97% id in 243 aa. Note: Contains a 14xSD(V/M)PV repeat; hypothetical protein 1693317..1694507 Burkholderia pseudomallei K96243 3094573 YP_108080.1 CDS rpsF NC_006350.1 1694743 1695117 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1694743..1695117 Burkholderia pseudomallei K96243 3093548 YP_108081.1 CDS BPSL1459 NC_006350.1 1695154 1695453 D Low similarity to Escherichia coli primosomal replication protein N PriB or b4201 SWALL:PRIB_ECOLI (SWALL:P07013) (103 aa) fasta scores: E(): 0.0042, 30.3% id in 99 aa and similar to Ralstonia solanacearum hypothetical protein rsc1308 or rs02830 SWALL:Q8XZT7 (EMBL:AL646063) (108 aa) fasta scores: E(): 5.2e-13, 46.46% id in 99 aa; primosomal replication protein 1695154..1695453 Burkholderia pseudomallei K96243 3094574 YP_108082.1 CDS rpsR NC_006350.1 1695456 1695731 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1695456..1695731 Burkholderia pseudomallei K96243 3091799 YP_108083.1 CDS rplI NC_006350.1 1695759 1696211 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1695759..1696211 Burkholderia pseudomallei K96243 3093180 YP_108084.1 CDS dnaB NC_006350.1 1696355 1697737 D unwinds double stranded DNA; replicative DNA helicase 1696355..1697737 Burkholderia pseudomallei K96243 3093450 YP_108085.1 CDS BPSL1463 NC_006350.1 1697876 1698502 D Similar to Rhizobium meliloti Pit accessory protein r00187 or smc02862 SWALL:PITX_RHIME (SWALL:O30498) (214 aa) fasta scores: E(): 1.8e-15, 30.95% id in 210 aa, and to Ralstonia solanacearum hypothetical protein rsc1312 rsc1312 or rs02834 SWALL:Q8XZT3 (EMBL:AL646063) (208 aa) fasta scores: E(): 2.5e-45, 67.3% id in 208 aa; hypothetical protein 1697876..1698502 Burkholderia pseudomallei K96243 3094583 YP_108086.1 CDS BPSL1464 NC_006350.1 1698513 1699523 D Similar to Ralstonia solanacearum probable low-affinity phosphate transporter lipoprotein transmembrane rsc1313 or rs02835 SWALL:Q8XZT2 (EMBL:AL646063) (336 aa) fasta scores: E(): 2.5e-104, 80.95% id in 336 aa, and to Rhizobium meliloti probable low-affinity inorganic phosphate transporter Pit or r00186 or smc02861 SWALL:PIT_RHIME (SWALL:O30499) (334 aa) fasta scores: E(): 6.9e-75, 63.55% id in 321 aa; integral membrane transport protein 1698513..1699523 Burkholderia pseudomallei K96243 3094584 YP_108087.1 CDS BPSL1465 NC_006350.1 1699758 1700972 R Only N-terminal region similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1314 or rs02836 SWALL:Q8XZT1 (EMBL:AL646063) (258 aa) fasta scores: E(): 1e-21, 48.23% id in 255 aa, and to Neisseria meningitidis outer membrane protein precursor gna2001 or nmb2001 SWALL:Q9JR56 (EMBL:AF226476) (251 aa) fasta scores: E(): 1.6e-08, 38.41% id in 151 aa. Note: From residue 175 this CDS has No significant database matches; peptidase complement(1699758..1700972) Burkholderia pseudomallei K96243 3094544 YP_108088.1 CDS BPSL1466 NC_006350.1 1701212 1702603 R Similar to Xanthomonas campestris hypothetical protein Xcc1737 xcc1737 SWALL:AAM41028 (EMBL:AE012275) (469 aa) fasta scores: E(): 8.8e-105, 61.4% id in 469 aa, and to Clostridium perfringens probable phosphate starvation inducible protein cpe1665 SWALL:Q8XJT8 (EMBL:AP003191) (459 aa) fasta scores: E(): 6.8e-39, 35.23% id in 474 aa, and C-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 PhoH protein or PsiH or b1020 or z1522 or ecs1266 SWALL:PHOH_ECOLI (SWALL:P31544) (354 aa) fasta scores: E(): 1.3e-11, 37.17% id in 191 aa; hypothetical protein complement(1701212..1702603) Burkholderia pseudomallei K96243 3094545 YP_108089.1 CDS BPSL1467 NC_006350.1 1703337 1703798 R Similar to Escherichia coli, and Escherichia coli O157:H7 bacterioferritin comigratory protein Bcp or b2480 or z3739 or ecs3342 SWALL:BCP_ECOLI (SWALL:P23480) (156 aa) fasta scores: E(): 2.1e-16, 39.28% id in 140 aa, and to Ralstonia solanacearum probable bacterioferritin comigratory oxidoreductase rsc1317 or rs02839 SWALL:Q8XZS8 (EMBL:AL646063) (154 aa) fasta scores: E(): 5e-41, 68.83% id in 154 aa; bacterioferritin comigratory protein complement(1703337..1703798) Burkholderia pseudomallei K96243 3094546 YP_108090.1 CDS BPSL1468 NC_006350.1 1703888 1704784 R Similar to Ralstonia solanacearum hypothetical protein rsc1318 or rs02840 SWALL:Q8XZS7 (EMBL:AL646063) (297 aa) fasta scores: E(): 3.5e-91, 73.4% id in 297 aa, and to Yersinia pestis, and Yersinia pseudotuberculosis hypothetical protein ypo2419 SWALL:Q93PD7 (EMBL:AJ414152) (301 aa) fasta scores: E(): 7.3e-33, 34.89% id in 298 aa; hypothetical protein complement(1703888..1704784) Burkholderia pseudomallei K96243 3094547 YP_108091.1 CDS BPSL1471 NC_006350.1 1706795 1707802 R Similar to Salmonella typhimurium polymixin resistance protein PmrF or stm2298 SWALL:O52324 (EMBL:AF036677) (327 aa) fasta scores: E(): 5.8e-55, 51.63% id in 306 aa, and to Bacteriophage Sfx bactoprenol glucosyl transferase GtrB SWALL:GTRB_BPSFX (SWALL:Q9T1D6) (305 aa) fasta scores: E(): 2e-26, 31.14% id in 305 aa; polymixin resistance glucosyl transferase complement(1706795..1707802) Burkholderia pseudomallei K96243 3093470 YP_108092.1 CDS BPSL1472 NC_006350.1 1707809 1708960 R Similar to Escherichia coli lipopolysaccharide biosynthesis protein RffA or WecE or b3791 SWALL:RFFA_ECOLI (SWALL:P27833) (376 aa) fasta scores: E(): 4e-31, 35.09% id in 379 aa, and to Ralstonia solanacearum aminotransferase rsc1322 or rs02844 SWALL:Q8XZS3 (EMBL:AL646063) (386 aa) fasta scores: E(): 2.2e-102, 67.01% id in 385 aa; LPS biosynthesis-like protein complement(1707809..1708960) Burkholderia pseudomallei K96243 3093574 YP_108093.1 CDS BPSL1473 NC_006350.1 1709087 1709458 R Similar to Ralstonia solanacearum small multidrug resistance transmembrane protein rsc1323 or rs02845 SWALL:Q8XZS2 (EMBL:AL646063) (123 aa) fasta scores: E(): 4.6e-35, 79.67% id in 123 aa, and to Brucella melitensis transporter DME family bmeii0439 SWALL:Q8YCT9 (EMBL:AE009680) (159 aa) fasta scores: E(): 2e-10, 40% id in 115 aa; hypothetical protein complement(1709087..1709458) Burkholderia pseudomallei K96243 3093575 YP_108094.1 CDS BPSL1474 NC_006350.1 1709479 1711185 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1324 or rs02846 SWALL:Q8XZS1 (EMBL:AL646063) (556 aa) fasta scores: E(): 2e-106, 49.64% id in 564 aa, and to Escherichia coli hypothetical protein YfbI or b2257 SWALL:YFBI_ECOLI (SWALL:P76473) (550 aa) fasta scores: E(): 2.8e-28, 24.15% id in 563 aa; hypothetical protein complement(1709479..1711185) Burkholderia pseudomallei K96243 3092098 YP_108095.1 CDS BPSL1475 NC_006350.1 1711354 1711728 R Similar to Ralstonia solanacearum hypothetical protein rsc1325 or rs02847 SWALL:Q8XZS0 (EMBL:AL646063) (126 aa) fasta scores: E(): 1.7e-32, 73.59% id in 125 aa, and to Xanthomonas campestris hypothetical protein xcc1710 SWALL:AAM41004 (EMBL:AE012272) (124 aa) fasta scores: E(): 5.3e-10, 35.29% id in 119 aa; hypothetical protein complement(1711354..1711728) Burkholderia pseudomallei K96243 3092099 YP_108096.1 CDS BPSL1476 NC_006350.1 1712067 1713305 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase 1712067..1713305 Burkholderia pseudomallei K96243 3092368 YP_108097.1 CDS hom NC_006350.1 1713350 1714678 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1713350..1714678 Burkholderia pseudomallei K96243 3094454 YP_108098.1 CDS thrC NC_006350.1 1714686 1716137 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1714686..1716137 Burkholderia pseudomallei K96243 3092336 YP_108099.1 CDS moeA NC_006350.1 1716911 1718227 D Similar to Escherichia coli molybdopterin biosynthesis protein MoeA or ChlE or BisB or NarE or b0827 SWALL:MOEA_ECOLI (SWALL:P12281) (411 aa) fasta scores: E(): 4.7e-42, 39.72% id in 433 aa, and to Alcaligenes eutrophus MoeA protein SWALL:Q8VMA0 (EMBL:AJ279073) (412 aa) fasta scores: E(): 1.4e-68, 66.2% id in 432 aa; molybdopterin biosynthesis protein 1716911..1718227 Burkholderia pseudomallei K96243 3094366 YP_108100.1 CDS moaD NC_006350.1 1718249 1718506 D Similar to Escherichia coli molybdopterin converting factor subunit 1 MoaD or ChlA4 or ChlM or b0784 SWALL:MOAD_ECOLI (SWALL:P30748) (81 aa) fasta scores: E(): 1.1e-05, 40.96% id in 83 aa, and to Ralstonia solanacearum probable molybdopterin converting factor rsc1331 or rs02853 SWALL:Q8XZR4 (EMBL:AL646064) (87 aa) fasta scores: E(): 7.8e-20, 65.88% id in 85 aa; molybdopterin converting factor subunit 1 1718249..1718506 Burkholderia pseudomallei K96243 3091687 YP_108101.1 CDS moaE NC_006350.1 1718517 1719005 D Similar to Escherichia coli molybdopterin converting factor subunit 2 MoaE or ChlA5 or b0785 SWALL:MOAE_ECOLI (SWALL:P30749) (149 aa) fasta scores: E(): 3.2e-28, 52.74% id in 146 aa, and to Alcaligenes eutrophus molybdopterin synthase large subunit MoaE SWALL:Q8VM98 (EMBL:AJ279073) (172 aa) fasta scores: E(): 7.3e-41, 66.88% id in 154 aa; molybdopterin converting factor subunit 2 1718517..1719005 Burkholderia pseudomallei K96243 3094365 YP_108102.1 CDS BPSL1482 NC_006350.1 1719333 1719875 R Similar to Brucella melitensis SEC-independent protein translocase bmeii0398 SWALL:Q8YCY0 (EMBL:AE009677) (141 aa) fasta scores: E(): 5.1e-13, 37.95% id in 137 aa, and to Agrobacterium tumefaciens hypothetical protein atu0250 or agr_c_428 SWALL:Q8UIP3 (EMBL:AE008997) (157 aa) fasta scores: E(): 1.4e-11, 42.34% id in 111 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; hypothetical protein complement(1719333..1719875) Burkholderia pseudomallei K96243 3092369 YP_108103.1 CDS BPSL1483 NC_006350.1 1720059 1720556 D Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YjeB or b4178 or z5785 or ecs5154 SWALL:YJEB_ECOLI (SWALL:P21498) (141 aa) fasta scores: E(): 7.2e-18, 38.62% id in 145 aa, and to Ralstonia solanacearum hypothetical protein rsc3397 or rs01705 SWALL:Q8XTZ8 (EMBL:AL646075) (172 aa) fasta scores: E(): 2.9e-24, 47.61% id in 168 aa; DNA-binding protein 1720059..1720556 Burkholderia pseudomallei K96243 3093311 YP_108104.1 CDS clpB NC_006350.1 1720727 1723357 D Similar to Escherichia coli, and Escherichia coli O157:H7 ClpB protein or HtpM or b2592 or z3886 or ecs3455 SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 2e-185, 66.04% id in 860 aa, and to Ralstonia solanacearum probable ATP-dependent protease rsc1335 or rs02857 SWALL:Q8XZR0 (EMBL:AL646064) (862 aa) fasta scores: E(): 0, 80.2% id in 864 aa. Note: Also similar to BPSL0899 (773 aa) fasta scores: E(): 5.2e-47, 39.789% identity in 852 aa overlap and to BPSS1502 (Chromosome 2) (1013 aa) fasta scores: E(): 1.2e-48, 37.646% identity in 943 aa overlap; ClpB heat-shock protein 1720727..1723357 Burkholderia pseudomallei K96243 3094211 YP_108105.1 CDS BPSL1485 NC_006350.1 1723606 1724028 R Similar to Escherichia coli hypothetical protein YidB or b3698 SWALL:YIDB_ECOLI (SWALL:P09996) (132 aa) fasta scores: E(): 1.1e-09, 37.39% id in 115 aa, and to Rhizobium loti hypothetical protein mlr4715 SWALL:Q98DG3 (EMBL:AP003004) (165 aa) fasta scores: E(): 1.9e-08, 33.85% id in 127 aa; hypothetical protein complement(1723606..1724028) Burkholderia pseudomallei K96243 3093312 YP_108106.1 CDS BPSL1486 NC_006350.1 1724107 1724802 R Only central part similar to Ralstonia solanacearum COMEA-related signal peptide protein rsc0916 or rs04499 SWALL:Q8Y0X7 (EMBL:AL646061) (105 aa) fasta scores: E(): 1.5e-06, 51.92% id in 104 aa. Note: C-terminal region presents two regions of high hidrophilicity, high content in alanine amino acid residues, high G+C content and no databsse matches; hypothetical protein complement(1724107..1724802) Burkholderia pseudomallei K96243 3093390 YP_108107.1 CDS BPSL1487 NC_006350.1 1725071 1725565 D Similar to Clostridium acetobutylicum transcriptional regulator, MerR family cac3507 SWALL:Q97DH0 (EMBL:AE007847) (126 aa) fasta scores: E(): 8.7e-14, 41.96% id in 112 aa, and to Streptomyces coelicolor MerR-family transcriptional regulator sco2875 or sce6.12 SWALL:Q9KZS6 (EMBL:AL353832) (135 aa) fasta scores: E(): 2.3e-11, 41.88% id in 117 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; MerR family transcriptional regulator 1725071..1725565 Burkholderia pseudomallei K96243 3093391 YP_108108.1 CDS BPSL1488 NC_006350.1 1725514 1725912 D Similar to Methanobacterium thermoautotrophicum gamma-carboxymuconolactone decarboxylase mth234 SWALL:O26336 (EMBL:AE000810) (125 aa) fasta scores: E(): 2.8e-20, 49.59% id in 123 aa, and to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 4.1e-09, 35.29% id in 119 aa. Note: N-terminal region overlaps in 17 residues with CDS upstream; decarboxylase 1725514..1725912 Burkholderia pseudomallei K96243 3093332 YP_108109.1 CDS BPSL1489 NC_006350.1 1726307 1727662 R Similar to Vibrio parahaemolyticus multidrug resistance protein NorM SWALL:NORM_VIBPA (SWALL:O82855) (456 aa) fasta scores: E(): 3.3e-43, 33.56% id in 438 aa, and to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1180 or rs04529 SWALL:Q8Y064 (EMBL:AL646063) (448 aa) fasta scores: E(): 5.6e-91, 57.52% id in 445 aa; hypothetical protein complement(1726307..1727662) Burkholderia pseudomallei K96243 3093333 YP_108110.1 CDS BPSL1490 NC_006350.1 1727666 1729504 R Similar to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1181 or rs05713 SWALL:Q8Y063 (EMBL:AL646063) (598 aa) fasta scores: E(): 5e-135, 52.92% id in 582 aa, and to Neisseria meningitidis inner membrane protein nma0497 SWALL:Q9JW86 (EMBL:AL162753) (558 aa) fasta scores: E(): 2.1e-23, 26.95% id in 575 aa; hypothetical protein complement(1727666..1729504) Burkholderia pseudomallei K96243 3093011 YP_108111.1 CDS rpmE2 NC_006350.1 1729638 1729901 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(1729638..1729901) Burkholderia pseudomallei K96243 3093012 YP_108112.1 CDS BPSL1492 NC_006350.1 1730116 1730961 R Similar to Ralstonia solanacearum hypothetical protein rsc1184 or rs05716 SWALL:Q8Y060 (EMBL:AL646063) (288 aa) fasta scores: E(): 4.8e-57, 53.52% id in 284 aa, and to Escherichia coli hypothetical protein YeeI or b1976 SWALL:YEEI_ECOLI (SWALL:P76346) (265 aa) fasta scores: E(): 1.5e-16, 33.88% id in 242 aa; hypothetical protein complement(1730116..1730961) Burkholderia pseudomallei K96243 3094806 YP_108113.1 CDS BPSL1493 NC_006350.1 1731004 1732560 R Similar to Ralstonia solanacearum multidrug resistance-like transmembrane protein rsc1473 or rs03834 SWALL:Q8XZC8 (EMBL:AL646064) (517 aa) fasta scores: E(): 2.3e-40, 31.05% id in 512 aa, and to Xanthomonas campestris multidrug resistance membrane translocase xcc1400 SWALL:AAM40698 (EMBL:AE012239) (526 aa) fasta scores: E(): 3.5e-24, 24.95% id in 521 aa; hypothetical protein complement(1731004..1732560) Burkholderia pseudomallei K96243 3094807 YP_108114.1 CDS BPSL1494 NC_006350.1 1732557 1733057 R Similar to Deinococcus radiodurans transcriptional regulator, MerR family dr2306 SWALL:Q9RS21 (EMBL:AE002062) (155 aa) fasta scores: E(): 7.3e-21, 50% id in 144 aa, and to the N-terminal region of Streptomyces coelicolor MerR-family transcriptional regulator sco7698 or sc1a4.06C SWALL:Q9EX58 (EMBL:AL450433) (380 aa) fasta scores: E(): 4.3e-06, 37.33% id in 150 aa; MerR family transcriptional regulator complement(1732557..1733057) Burkholderia pseudomallei K96243 3094530 YP_108115.1 CDS rho NC_006350.1 1733194 1734456 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(1733194..1734456) Burkholderia pseudomallei K96243 3094080 YP_108116.1 CDS BPSL1496 NC_006350.1 1734520 1734645 R hypothetical protein complement(1734520..1734645) Burkholderia pseudomallei K96243 3094531 YP_108117.1 CDS trxA NC_006350.1 1734652 1734978 R Similar to Escherichia coli, Salmonella typhimurium, and Salmonella typhi thioredoxin 1 TrxA or TsnC or FipA or b3781 or stm3915 or sty3639 SWALL:THIO_ECOLI (SWALL:P00274) (108 aa) fasta scores: E(): 1.2e-26, 64.48% id in 107 aa, and to Ralstonia solanacearum probable thioredoxin 1 rsc1188 or rs05720 SWALL:Q8Y056 (EMBL:AL646063) (108 aa) fasta scores: E(): 3.2e-37, 88.88% id in 108 aa; thioredoxin 1 complement(1734652..1734978) Burkholderia pseudomallei K96243 3091475 YP_108118.1 CDS dnaX NC_006350.1 1735645 1738122 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1735645..1738122 Burkholderia pseudomallei K96243 3094276 YP_108119.1 CDS BPSL1499 NC_006350.1 1738219 1738545 D Similar to Ralstonia solanacearum hypothetical protein rsc1192 or rs05724 SWALL:YB92_RALSO (SWALL:Q8Y052) (115 aa) fasta scores: E(): 5.6e-29, 79.13% id in 115 aa, and to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi hypothetical protein YbaB or b0471 or z0588 or ecs0524 or stm0485 or sty0529 SWALL:YBAB_ECOLI (SWALL:P17577) (109 aa) fasta scores: E(): 9.6e-24, 67.92% id in 106 aa; hypothetical protein 1738219..1738545 Burkholderia pseudomallei K96243 3092295 YP_108120.1 CDS recR NC_006350.1 1738571 1739179 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1738571..1739179 Burkholderia pseudomallei K96243 3091893 YP_108121.1 CDS BPSL1501 NC_006350.1 1739249 1740454 D Similar to Pseudomonas aeruginosa hypothetical protein pa3733 SWALL:Q9HXQ9 (EMBL:AE004792) (409 aa) fasta scores: E(): 4.9e-99, 65.92% id in 402 aa, to Caulobacter crescentus hypothetical protein cc3562 SWALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 6.6e-76, 52.67% id in 393 aa, and to Escherichia coli crotonobetainyl-CoA:carnitine CoA-transferase CaiB or b0038 SWALL:CAIB_ECOLI (SWALL:P31572) (405 aa) fasta scores: E(): 9.8e-28, 29.52% id in 403 aa; transferase 1739249..1740454 Burkholderia pseudomallei K96243 3092296 YP_108122.1 CDS surE NC_006350.1 1740559 1741320 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1740559..1741320 Burkholderia pseudomallei K96243 3092285 YP_108123.1 CDS BPSL1503 NC_006350.1 1741317 1742285 D Similar to full length of Ralstonia solanacearum hypothetical protein rsc1205 or rs02685 SWALL:Q8Y039 (EMBL:AL646063) (321 aa) fasta scores: E(): 3.5e-30, 54.03% id in 335 aa, and C-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 protein-L-isoaspartate O-methyltransferase Pcm or b2743 or z4051 or ecs3597 SWALL:PIMT_ECOLI (SWALL:P24206) (207 aa) fasta scores: E(): 4.3e-21, 45.19% id in 208 aa; L-isoaspartate O-methyltransferase 1741317..1742285 Burkholderia pseudomallei K96243 3092558 YP_108124.1 CDS BPSL1504 NC_006350.1 1742291 1743187 D Similar to full length of Rhodocyclus gelatinosus NlpD protein SWALL:Q9JP90 (EMBL:AB034704) (314 aa) fasta scores: E(): 5.3e-38, 51.91% id in 314 aa, and to C-terminal region of Escherichia coli lipoprotein NlpD precursor or b2742 SWALL:NLPD_ECOLI (SWALL:P33648) (379 aa) fasta scores: E(): 1.3e-18, 42.57% id in 256 aa; peptidase 1742291..1743187 Burkholderia pseudomallei K96243 3092559 YP_108125.1 CDS rpoS NC_006350.1 1743199 1744278 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 1743199..1744278 Burkholderia pseudomallei K96243 3094833 YP_108126.1 CDS BPSL1506 NC_006350.1 1744286 1745062 D Similar to Neisseria meningitidis hypothetical protein nma1628 SWALL:Q9JTU6 (EMBL:AL162756) (264 aa) fasta scores: E(): 6.1e-65, 61.21% id in 263 aa, and to Campylobacter jejuni hypothetical protein cj1132C SWALL:Q9PNG2 (EMBL:AL139077) (264 aa) fasta scores: E(): 1.3e-26, 35.56% id in 239 aa; hypothetical protein 1744286..1745062 Burkholderia pseudomallei K96243 3094152 YP_108127.1 CDS BPSL1507 NC_006350.1 1745236 1746096 R Similar to Ralstonia solanacearum hypothetical protein rsc1208 or rs02691 SWALL:Q8Y036 (EMBL:AL646063) (289 aa) fasta scores: E(): 2.4e-46, 50% id in 290 aa, and to Rhizobium loti hypothetical protein mll3063 SWALL:Q98H23 (EMBL:AP003001) (302 aa) fasta scores: E(): 2e-11, 30% id in 300 aa; hypothetical protein complement(1745236..1746096) Burkholderia pseudomallei K96243 3094153 YP_108128.1 CDS rumA NC_006350.1 1746174 1747571 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1746174..1747571 Burkholderia pseudomallei K96243 3092076 YP_108129.1 CDS BPSL1509 NC_006350.1 1747645 1748358 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1210 or rs02699 SWALL:Q8Y034 (EMBL:AL646063) (233 aa) fasta scores: E(): 1.1e-60, 74% id in 227 aa, and to Escherichia coli hypothetical protein YccA or b0970 SWALL:YCCA_ECOLI (SWALL:P06967) (219 aa) fasta scores: E(): 9.2e-22, 37.68% id in 207 aa; hypothetical protein complement(1747645..1748358) Burkholderia pseudomallei K96243 3092077 YP_108130.1 CDS ndk NC_006350.1 1748592 1749017 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1748592..1749017 Burkholderia pseudomallei K96243 3091685 YP_108131.1 CDS BPSL1511 NC_006350.1 1749059 1750195 D Similar to Ralstonia solanacearum hypothetical protein rsc1212 or rs02704 SWALL:Q8Y032 (EMBL:AL646063) (383 aa) fasta scores: E(): 2.6e-120, 80.96% id in 373 aa, and to Escherichia coli hypothetical protein YfgB or b2517 SWALL:YFGB_ECOLI (SWALL:P36979) (384 aa) fasta scores: E(): 1e-73, 53.33% id in 375 aa; hypothetical protein 1749059..1750195 Burkholderia pseudomallei K96243 3093085 YP_108132.1 CDS BPSL1512 NC_006350.1 1750337 1751425 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1214 or rs02709 SWALL:Q8Y030 (EMBL:AL646063) (367 aa) fasta scores: E(): 5.1e-17, 34.87% id in 367 aa, and to Escherichia coli hypothetical protein YfgA or b2516 SWALL:YFGA_ECOLI (SWALL:P27434) (337 aa) fasta scores: E(): 3.3e-06, 27.85% id in 341 aa; hypothetical protein 1750337..1751425 Burkholderia pseudomallei K96243 3093086 YP_108133.1 CDS ispG NC_006350.1 1751569 1752819 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1751569..1752819 Burkholderia pseudomallei K96243 3094863 YP_108134.1 CDS hisS NC_006350.1 1752838 1754178 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1752838..1754178 Burkholderia pseudomallei K96243 3092128 YP_108135.1 CDS BPSL1515 NC_006350.1 1754231 1754860 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1217 or rs02712 SWALL:Q8Y028 (EMBL:AL646063) (211 aa) fasta scores: E(): 2e-49, 67.61% id in 210 aa, and to Neisseria gonorrhoeae hypothetical 23.1 kDa protein in engA 5'region SWALL:YENG_NEIGO (SWALL:O87406) (209 aa) fasta scores: E(): 2.4e-13, 31.92% id in 213 aa; hypothetical protein 1754231..1754860 Burkholderia pseudomallei K96243 3094864 YP_108136.1 CDS BPSL1516 NC_006350.1 1754905 1756050 D Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1218 or rs02713 SWALL:Q8Y027 (EMBL:AL646063) (388 aa) fasta scores: E(): 1.5e-67, 48.78% id in 369 aa, and to Escherichia coli hypothetical protein YfgL or b2512 SWALL:YFGL_ECOLI (SWALL:P77774) (392 aa) fasta scores: E(): 7.5e-25, 31.41% id in 382 aa; hypothetical protein 1754905..1756050 Burkholderia pseudomallei K96243 3092255 YP_108137.1 CDS engA NC_006350.1 1756326 1757663 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1756326..1757663 Burkholderia pseudomallei K96243 3092256 YP_108138.1 CDS hfq NC_006350.1 1757798 1758037 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1757798..1758037 Burkholderia pseudomallei K96243 3092453 YP_108139.1 CDS hflX NC_006350.1 1758094 1759272 D Similar to Escherichia coli GTP-binding protein HflX or b4173 SWALL:HFLX_ECOLI (SWALL:P25519) (426 aa) fasta scores: E(): 1.1e-64, 56.06% id in 371 aa, and to Ralstonia solanacearum hypothetical protein rsc1221 or rs02723 SWALL:Q8Y024 (EMBL:AL646063) (417 aa) fasta scores: E(): 9.4e-83, 67.97% id in 356 aa, and to; GTP-binding protein 1758094..1759272 Burkholderia pseudomallei K96243 3092452 YP_108140.1 CDS BPSL1520 NC_006350.1 1759318 1760667 D Similar to Escherichia coli, and Escherichia coli O157:H7 HflK protein or HflA or b4174 or z5781 or ecs5150 SWALL:HFLK_ECOLI (SWALL:P25662) (419 aa) fasta scores: E(): 9.1e-23, 32.07% id in 424 aa, and to Ralstonia solanacearum hypothetical transmembrane protein rsc1222 or rs02724 SWALL:Q8Y023 (EMBL:AL646063) (447 aa) fasta scores: E(): 2.6e-49, 49.55% id in 450 aa; hypothetical protein 1759318..1760667 Burkholderia pseudomallei K96243 3094639 YP_108141.1 CDS BPSL1521 NC_006350.1 1760684 1761583 D Similar to Escherichia coli, and Escherichia coli O157:H7 HflC protein or HflA or b4175 or z5782 or ecs5151 SWALL:HFLC_ECOLI (SWALL:P25661) (334 aa) fasta scores: E(): 3.3e-16, 35.45% id in 330 aa, and to Ralstonia solanacearum serine protease transmembrane protein rsc1223 or rs02730 SWALL:Q8Y022 (EMBL:AL646063) (304 aa) fasta scores: E(): 5.7e-38, 44.07% id in 304 aa; hypothetical protein 1760684..1761583 Burkholderia pseudomallei K96243 3094640 YP_108142.1 CDS BPSL1522 NC_006350.1 1761608 1761799 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1224 or rs02731 SWALL:Q8Y021 (EMBL:AL646063) (66 aa) fasta scores: E(): 4.7e-06, 44.64% id in 56 aa, and to Yersinia pestis membrane protein ypo0377 SWALL:Q8ZIV8 (EMBL:AJ414142) (66 aa) fasta scores: E(): 0.003, 33.33% id in 60 aa; hypothetical protein 1761608..1761799 Burkholderia pseudomallei K96243 3092400 YP_108143.1 CDS hisZ NC_006350.1 1761911 1763059 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 1761911..1763059 Burkholderia pseudomallei K96243 3092401 YP_108144.1 CDS purA NC_006350.1 1763184 1764530 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1763184..1764530 Burkholderia pseudomallei K96243 3093829 YP_108145.1 CDS BPSL1525 NC_006350.1 1764567 1765130 D Similar to Ralstonia solanacearum nucleotide phosphoribosyltransferase rsc1227 or rs02734 SWALL:Q8Y018 (EMBL:AL646063) (193 aa) fasta scores: E(): 4.9e-62, 82.77% id in 180 aa, and to Haemophilus influenzae xanthine-guanine phosphoribosyltransferase (GptA or XgpRT-A or hi0674) and (gptb or xgprt-b or hi0692) SWALL:XGPT_HAEIN (SWALL:P43859) (155 aa) fasta scores: E(): 0.0031, 31.41% id in 156 aa; nucleotide phosphoribosyltransferase 1764567..1765130 Burkholderia pseudomallei K96243 3092311 YP_108146.1 CDS kup NC_006350.1 1765422 1767314 D Similar to Escherichia coli kup system potassium uptake protein Kup or TrkD or b3747 SWALL:KUP_ECOLI (SWALL:P30016) (622 aa) fasta scores: E(): 4.9e-119, 49.67% id in 624 aa, and to Ralstonia solanacearum probable potassium uptake transmembrane protein rsc1621 or rs03984 SWALL:Q8XYY5 (EMBL:AL646065) (633 aa) fasta scores: E(): 1.8e-167, 68.26% id in 624 aa; kup system potassium uptake protein 1765422..1767314 Burkholderia pseudomallei K96243 3091956 YP_108147.1 CDS tex NC_006350.1 1767550 1769874 R Similar to Bordetella pertussis Tex protein SWALL:TEX_BORPE (SWALL:Q45388) (791 aa) fasta scores: E(): 1.2e-179, 64.38% id in 775 aa, and to Ralstonia solanacearum transcription accessory protein rsc1623 or rs03986 SWALL:Q8XYY3 (EMBL:AL646065) (779 aa) fasta scores: E(): 0, 78.16% id in 783 aa; transcription accessory protein complement(1767550..1769874) Burkholderia pseudomallei K96243 3091541 YP_108148.1 CDS BPSL1528 NC_006350.1 1770014 1770763 D Similar to Ralstonia solanacearum hypothetical protein RSC1624or RS03987 SWALL:Q8XYY2 (EMBL:AL646065) (253 aa) fasta scores: E(): 9.7e-23, 43.29% id in 231 aa; hypothetical protein 1770014..1770763 Burkholderia pseudomallei K96243 3092312 YP_108149.1 CDS BPSL1529 NC_006350.1 1770872 1771087 D Similar to Ralstonia solanacearum hypothetical protein rsc1625 or rs03988 SWALL:Q8XYY1 (EMBL:AL646065) (67 aa) fasta scores: E(): 0.0064, 46.29% id in 54 aa, and to Xanthomonas axonopodis hypothetical protein xac4268 SWALL:AAM39103 (EMBL:AE012079) (72 aa) fasta scores: E(): 0.026, 36.98% id in 73 aa; hypothetical protein 1770872..1771087 Burkholderia pseudomallei K96243 3091985 YP_108150.1 CDS BPSL1530 NC_006350.1 1771348 1773408 D Similar to Ralstonia solanacearum probable ATP-dependent DNA helicase-related protein rsc1626 or rs03989 SWALL:Q8XYY0 (EMBL:AL646065) (713 aa) fasta scores: E(): 1.2e-174, 71.71% id in 640 aa, and to Escherichia coli probable ATP-dependent helicase YoaA or b1808 SWALL:YOAA_ECOLI (SWALL:P76257) (636 aa) fasta scores: E(): 1.4e-41, 45.26% id in 623 aa; ATP-dependent DNA helicase-like protein 1771348..1773408 Burkholderia pseudomallei K96243 3091986 YP_108151.1 CDS BPSL1531 NC_006350.1 1773584 1774408 R Similar to Neisseria meningitidis competence lipoprotein coml precursor ComL or nma0907 SWALL:COML_NEIMA (SWALL:Q9JVB7) (267 aa) fasta scores: E(): 5e-41, 44.35% id in 257 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical lipoprotein precursor YfiO or b2595 or z3889 or ecs3458 SWALL:YFIO_ECOLI (SWALL:P77146) (245 aa) fasta scores: E(): 1.7e-27, 36.13% id in 238 aa; lipoprotein complement(1773584..1774408) Burkholderia pseudomallei K96243 3091887 YP_108152.1 CDS BPSL1532 NC_006350.1 1774462 1775649 D Similar to Escherichia coli ribosomal large subunit pseudouridine synthase D RluD SWALL:RLUD_ECOLI (SWALL:P33643) (325 aa) fasta scores: E(): 1.1e-46, 48.57% id in 315 aa, and to Ralstonia solanacearum ribosomal large subunit pseudouridine synthase D RluD SWALL:RLUD_RALSO (SWALL:Q8XYX8) (358 aa) fasta scores: E(): 1.7e-76, 63.2% id in 356 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site after codon 60; ribosomal large subunit pseudouridine synthase D 1774462..1775649 Burkholderia pseudomallei K96243 3091888 YP_108153.1 CDS BPSL1533 NC_006350.1 1775662 1776492 D Similar to Escherichia coli hypothetical protein YfiH or b2593 SWALL:YFIH_ECOLI (SWALL:P33644) (243 aa) fasta scores: E(): 9.1e-23, 50.74% id in 270 aa, and to Ralstonia solanacearum hypothetical protein rsc1629 or rs03992 SWALL:Q8XYX7 (EMBL:AL646065) (267 aa) fasta scores: E(): 5.1e-43, 59.55% id in 272 aa; hypothetical protein 1775662..1776492 Burkholderia pseudomallei K96243 3091518 YP_108154.1 CDS phbC NC_006350.1 1777009 1778814 D Similar to Alcaligenes eutrophus poly-beta-hydroxybutyrate polymerase PhbC SWALL:PHBC_ALCEU (SWALL:P23608) (589 aa) fasta scores: E(): 7.2e-130, 61.63% id in 589 aa, and to Burkholderia sp. DSMZ 9242 PhaC SWALL:Q9RB82 (EMBL:AF153086) (625 aa) fasta scores: E(): 1.4e-188, 82.89% id in 602 aa; poly-beta-hydroxybutyrate polymerase 1777009..1778814 Burkholderia pseudomallei K96243 3093057 YP_108155.1 CDS phbA NC_006350.1 1778911 1780092 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 1778911..1780092 Burkholderia pseudomallei K96243 3094224 YP_108156.1 CDS phbB NC_006350.1 1780218 1780958 D catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase 1780218..1780958 Burkholderia pseudomallei K96243 3093056 YP_108157.1 CDS BPSL1537 NC_006350.1 1781095 1781667 D Similar to Burkholderia sp. DSMZ 9242 hypothetical 21.8 kDa protein SWALL:Q9RB79 (EMBL:AF153086) (188 aa) fasta scores: E(): 1e-61, 92.1% id in 190 aa, and to Thiocystis violacea hypothetical protein in phbA 5'region SWALL:YPH4_THIVI (SWALL:P45368) (138 aa) fasta scores: E(): 1.1e-19, 54.54% id in 132 aa; hypothetical protein 1781095..1781667 Burkholderia pseudomallei K96243 3091519 YP_108158.1 CDS rimO NC_006350.1 1782265 1783644 D catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 1782265..1783644 Burkholderia pseudomallei K96243 3093910 YP_108159.1 CDS BPSL1539 NC_006350.1 1783647 1784573 D Similar to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 4.2e-19, 31.49% id in 308 aa, and to Pseudomonas putida fructokinase-like protein ORF5 SWALL:BAB96556 (EMBL:AB085816) (307 aa) fasta scores: E(): 5.3e-90, 78.07% id in 301 aa; fructokinase-like protein 1783647..1784573 Burkholderia pseudomallei K96243 3093911 YP_108160.1 CDS BPSL1540 NC_006350.1 1784669 1785853 D catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 1784669..1785853 Burkholderia pseudomallei K96243 3093104 YP_108161.1 CDS BPSL1541 NC_006350.1 1785870 1786451 D Very low similarity to Ralstonia solanacearum signal peptide protein rsc1638 or rs04012 SWALL:Q8XYW8 (EMBL:AL646065) (245 aa) fasta scores: E(): 8.1e-06, 35.18% id in 162 aa; hypothetical protein 1785870..1786451 Burkholderia pseudomallei K96243 3093105 YP_108162.1 CDS BPSL1542 NC_006350.1 1786752 1787936 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 1786752..1787936 Burkholderia pseudomallei K96243 3092176 YP_108163.1 CDS BPSL1543 NC_006350.1 1788200 1789045 R Similar to Escherichia coli, and Escherichia coli O157:H7 phosphoserine phosphatase SerB or b4388 or z5989 or ecs5346 SWALL:SERB_ECOLI (SWALL:P06862) (322 aa) fasta scores: E(): 1.6e-26, 41.72% id in 266 aa, and to Neisseria meningitidis phosphoserine phosphatase nma1179 SWALL:Q9JUR1 (EMBL:AL162755) (277 aa) fasta scores: E(): 2.1e-35, 47.6% id in 250 aa; phosphoserine phosphatase complement(1788200..1789045) Burkholderia pseudomallei K96243 3092177 YP_108164.1 CDS BPSL1544 NC_006350.1 1789902 1790447 D hypothetical protein 1789902..1790447 Burkholderia pseudomallei K96243 3093861 YP_108165.1 CDS BPSL1545 NC_006350.1 1791212 1792030 R Similar to Escherichia coli hypothetical protein YbbM or b0491 SWALL:YBBM_ECOLI (SWALL:P77307) (259 aa) fasta scores: E(): 1.3e-20, 28.3% id in 265 aa, and to Ralstonia solanacearum probable transmembrane protein rsc0748 or rs05105 SWALL:Q8Y1E2 (EMBL:AL646060) (272 aa) fasta scores: E(): 2.6e-63, 68.32% id in 262 aa; ABC transporter membrane protein complement(1791212..1792030) Burkholderia pseudomallei K96243 3093862 YP_108166.1 CDS BPSL1546 NC_006350.1 1792027 1792722 R Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0749 or rs05104 SWALL:Q8Y1E1 (EMBL:AL646060) (230 aa) fasta scores: E(): 4.1e-34, 54.5% id in 222 aa, and to Salmonella typhi ABC transporter ATP-binding protein sty0548 SWALL:Q8Z8S1 (EMBL:AL627267) (225 aa) fasta scores: E(): 2.5e-11, 33.04% id in 227 aa; ABC transporter ATP-binding protein complement(1792027..1792722) Burkholderia pseudomallei K96243 3093241 YP_108167.1 CDS BPSL1547 NC_006350.1 1792856 1795330 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0773 or rs05081 SWALL:Q8Y1B7 (EMBL:AL646061) (740 aa) fasta scores: E(): 3e-79, 44.84% id in 814 aa, and to Yersinia pestis exported protein ypo3987 SWALL:Q8ZA33 (EMBL:AJ414160) (740 aa) fasta scores: E(): 2.1e-69, 39.63% id in 820 aa. Note: It contains a region from approx. residue 200 to approx. residue 350 with very little or no similarities to database entries; hypothetical protein 1792856..1795330 Burkholderia pseudomallei K96243 3093242 YP_108168.1 CDS BPSL1548 NC_006350.1 1795789 1797381 D Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter ATP-binding protein YbiT or b0820 or z1042 or ecs0897 SWALL:YBIT_ECOLI (SWALL:P75790) (530 aa) fasta scores: E(): 4.7e-115, 66.66% id in 531 aa, and to Salmonella typhi ABC transporter ATP-binding protein sty0879 SWALL:Q8Z870 (EMBL:AL627268) (531 aa) fasta scores: E(): 3.7e-115, 67.04% id in 531 aa; ABC transporter ATP-binding protein 1795789..1797381 Burkholderia pseudomallei K96243 3093243 YP_108169.1 CDS BPSL1549 NC_006350.1 1797528 1798163 R hypothetical protein complement(1797528..1798163) Burkholderia pseudomallei K96243 3093244 YP_108170.1 CDS BPSL1550 NC_006350.1 1798479 1799915 D Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 1.9e-59, 40.33% id in 476 aa, and to Ralstonia solanacearum betaine aldehyde dehydrogenase rsc1456 or rs03851 SWALL:Q8XZE5 (EMBL:AL646064) (478 aa) fasta scores: E(): 1.1e-127, 71.3% id in 474 aa; betaine aldehyde dehydrogenase 1798479..1799915 Burkholderia pseudomallei K96243 3094163 YP_108171.1 CDS BPSL1551 NC_006350.1 1800114 1801304 D Similar to Ralstonia solanacearum hypothetical protein rsc0114 or rs00984 SWALL:Q8Y367 (EMBL:AL646057) (402 aa) fasta scores: E(): 8.7e-90, 63.54% id in 384 aa, and to Fusobacterium nucleatum 2-nitropropane dioxygenase fn0664 SWALL:Q8RFM8 (EMBL:AE010577) (382 aa) fasta scores: E(): 3e-31, 37.22% id in 368 aa; 2-nitropropane dioxygenase 1800114..1801304 Burkholderia pseudomallei K96243 3094164 YP_108172.1 CDS BPSL1552 NC_006350.1 1801377 1802021 D Similar to Escherichia coli outer membrane protein W precursor OmpW or b1256 SWALL:OMPW_ECOLI (SWALL:P21364) (212 aa) fasta scores: E(): 7.9e-17, 38.27% id in 209 aa, to Vibrio cholerae outer membrane protein W precursor OmpW or vca0867 SWALL:OMPW_VIBCH (SWALL:P17266) (217 aa) fasta scores: E(): 2.7e-13, 32.55% id in 215 aa, and to Rhizobium sp. hypothetical outer-membrane protein Y4mB precursor SWALL:Y4MB_RHISN (SWALL:P55561) (229 aa) fasta scores: E(): 9.8e-22, 38.09% id in 231 aa; outer membrane protein 1801377..1802021 Burkholderia pseudomallei K96243 3093192 YP_108173.1 CDS BPSL1553 NC_006350.1 1802147 1802350 R Similar to Ralstonia solanacearum hypothetical protein rsc1457 or rs03850 SWALL:Q8XZE4 (EMBL:AL646064) (91 aa) fasta scores: E(): 3.6e-18, 67.18% id in 64 aa, and to Pseudomonas aeruginosa hypothetical protein pa1788 SWALL:Q9I2V4 (EMBL:AE004604) (155 aa) fasta scores: E(): 3.7e-06, 50% id in 44 aa; hypothetical protein complement(1802147..1802350) Burkholderia pseudomallei K96243 3093193 YP_108174.1 CDS BPSL1554 NC_006350.1 1802768 1804075 R Similar to Escherichia coli, and Escherichia coli O157:H7 manganese transport protein MntH or b2392 or z3658 or ecs3271 SWALL:MNTH_ECOLI (SWALL:P77145) (412 aa) fasta scores: E(): 1.6e-41, 37.82% id in 423 aa, and to Pseudomonas aeruginosa manganese transport protein pa0809 SWALL:MNT2_PSEAE (SWALL:Q9RPF2) (438 aa) fasta scores: E(): 6.3e-73, 51.28% id in 427 aa; metal-ion transport system, membrane protein complement(1802768..1804075) Burkholderia pseudomallei K96243 3092464 YP_108175.1 CDS potF NC_006350.1 1804461 1805555 D Similar to Escherichia coli putrescine-binding periplasmic protein precursor PotF or b0854 SWALL:POTF_ECOLI (SWALL:P31133) (370 aa) fasta scores: E(): 8.8e-71, 51.93% id in 362 aa, and to Xanthomonas campestris periplasmic putrescine-binding protein, permease xcc2344 SWALL:AAM41622 (EMBL:AE012342) (371 aa) fasta scores: E(): 3e-73, 51.66% id in 360 aa; putrescine-binding periplasmic protein 1804461..1805555 Burkholderia pseudomallei K96243 3091817 YP_108176.1 CDS potG NC_006350.1 1805670 1806806 D Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 5.1e-70, 55.4% id in 370 aa, and to Neisseria meningitidis spermidine/putrescine ABC transporter ATP-binding protein nmb0610 SWALL:Q9K0I9 (EMBL:AE002416) (419 aa) fasta scores: E(): 1e-73, 57.02% id in 356 aa; putrescine transport ATP-binding protein 1805670..1806806 Burkholderia pseudomallei K96243 3091818 YP_108177.1 CDS potH NC_006350.1 1806803 1807732 D Similar to Escherichia coli putrescine transport system permease PotH or b0856 SWALL:POTH_ECOLI (SWALL:P31135) (317 aa) fasta scores: E(): 3.3e-68, 59.85% id in 284 aa, and to Xanthomonas axonopodis polyamine transport protein xac2471 SWALL:AAM37322 (EMBL:AE011884) (288 aa) fasta scores: E(): 2e-69, 62.1% id in 285 aa; putrescine transport system permease 1806803..1807732 Burkholderia pseudomallei K96243 3092751 YP_108178.1 CDS potI NC_006350.1 1807729 1808547 D Similar to Escherichia coli putrescine transport system permease PotI or b0857 SWALL:POTI_ECOLI (SWALL:P31136) (281 aa) fasta scores: E(): 6.8e-60, 59% id in 261 aa, and to Yersinia pestis putrescine transport system permease ypo1334 SWALL:Q8ZGG3 (EMBL:AJ414147) (281 aa) fasta scores: E(): 3.5e-59, 56.7% id in 261 aa; putrescine transport system permease 1807729..1808547 Burkholderia pseudomallei K96243 3092752 YP_108179.1 CDS BPSL1559 NC_006350.1 1808802 1809608 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1541 or rs03761 SWALL:Q8XZ63 (EMBL:AL646065) (273 aa) fasta scores: E(): 2.3e-36, 49.62% id in 266 aa, and to Synechocystis sp. hypothetical protein slr1262 SWALL:P73802 (EMBL:D90909) (288 aa) fasta scores: E(): 6.1e-17, 32.45% id in 265 aa; hypothetical protein complement(1808802..1809608) Burkholderia pseudomallei K96243 3092465 YP_108180.1 CDS BPSL1560 NC_006350.1 1809648 1811318 R C-terminal region similar to Pseudomonas aeruginosa hypothetical protein pa2345 SWALL:Q9I1D3 (EMBL:AE004660) (411 aa) fasta scores: E(): 2.1e-93, 59.66% id in 414 aa, and N-terminal region to Rhodobacter capsulatus hypothetical protein SWALL:O33514 (EMBL:U23145) (146 aa) fasta scores: E(): 1.6e-13, 42.17% id in 147 aa. Posible fusion protein; hypothetical protein complement(1809648..1811318) Burkholderia pseudomallei K96243 3092114 YP_108181.1 CDS BPSL1561 NC_006350.1 1811369 1812292 R Similar to Ralstonia solanacearum hypothetical protein rsc1544 or rs05231 SWALL:Q8XZ60 (EMBL:AL646065) (286 aa) fasta scores: E(): 1.8e-36, 61.3% id in 292 aa, and to Caulobacter crescentus metallo-beta-lactamase cc2866 SWALL:Q9A4G8 (EMBL:AE005951) (267 aa) fasta scores: E(): 2.1e-28, 53.43% id in 277 aa; metallo-beta-lactamase complement(1811369..1812292) Burkholderia pseudomallei K96243 3092115 YP_108182.1 CDS BPSL1562 NC_006350.1 1812459 1813862 D C-terminal region similar to Escherichia coli formate hydrogenlyase transcriptional activator FhlA or b2731 SWALL:FHLA_ECOLI (SWALL:P19323) (692 aa) fasta scores: E(): 8e-38, 41.69% id in 331 aa, and to Thiobacillus denitrificans transcription regulator SWALL:AAM52226 (EMBL:AY112701) (302 aa) fasta scores: E(): 5e-43, 48% id in 300 aa. Note: N-terminal region (first 100 residues approx.) seems not to have similarities with any database entries; transcriptional regulatory protein 1812459..1813862 Burkholderia pseudomallei K96243 3092373 YP_108183.1 CDS BPSL1563 NC_006350.1 1814175 1814738 D Similar to Pseudomonas aeruginosa hypothetical protein pa2784 SWALL:Q9I059 (EMBL:AE004706) (185 aa) fasta scores: E(): 3e-30, 51.06% id in 188 aa; hypothetical protein 1814175..1814738 Burkholderia pseudomallei K96243 3092374 YP_108184.1 CDS BPSL1564 NC_006350.1 1814749 1814973 D Similar to Pseudomonas aeruginosa hypothetical protein pa2785 SWALL:Q9I058 (EMBL:AE004706) (72 aa) fasta scores: E(): 3.1e-19, 78.26% id in 69 aa, and to Caulobacter crescentus transcriptional regulator, cro/ci family cc3270 SWALL:Q9A3D4 (EMBL:AE005990) (75 aa) fasta scores: E(): 4.1e-16, 67.56% id in 74 aa; transcriptional regulatory protein 1814749..1814973 Burkholderia pseudomallei K96243 3094735 YP_108185.1 CDS BPSL1565 NC_006350.1 1816314 1817363 R Similar to Bradyrhizobium elkanii nodulation protein NolA SWALL:NOLA_BRAEL (SWALL:P50329) (219 aa) fasta scores: E(): 2.1e-14, 31.27% id in 227 aa, and to Streptomyces coelicolor transcriptional regulator sco5962 or sc7h1.32C SWALL:O54191 (EMBL:AL021411) (196 aa) fasta scores: E(): 7.9e-14, 39.32% id in 178 aa, and C-terminal region similar to full length of Klebsiella oxytoca albicidin resistance protein SWALL:ALBR_KLEOX (SWALL:P10488) (218 aa) fasta scores: E(): 7e-13, 30.66% id in 212 aa; MerR family transcriptional regulator complement(1816314..1817363) Burkholderia pseudomallei K96243 3094736 YP_108186.1 CDS BPSL1566 NC_006350.1 1817818 1819722 R Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.4e-21, 30.43% id in 483 aa, and to Ralstonia solanacearum probable outer membrane channel lipoprotein rsc0166 or rs01036 SWALL:Q8Y315 (EMBL:AL646057) (480 aa) fasta scores: E(): 1.1e-51, 45.2% id in 480 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; outer membrane lipoprotein complement(1817818..1819722) Burkholderia pseudomallei K96243 3093978 YP_108187.1 CDS BPSL1567 NC_006350.1 1819725 1822895 R Similar to Ralstonia solanacearum probable transmembrane drug efflux protein rsc1654 or rs05828 SWALL:Q8XYV2 (EMBL:AL646065) (1039 aa) fasta scores: E(): 2.4e-160, 51.37% id in 1057 aa, and to Escherichia coli acriflavine resistance protein F AcrF or EnvD or b3266 SWALL:ACRF_ECOLI (SWALL:P24181) (1034 aa) fasta scores: E(): 3.3e-45, 24.55% id in 1071 aa; drug-resistance cell envelope-like protein complement(1819725..1822895) Burkholderia pseudomallei K96243 3093979 YP_108188.1 CDS BPSL1568 NC_006350.1 1822892 1824007 R Similar to Rhizobium loti component of multidrug efflux system mlr7297 SWALL:Q986M0 (EMBL:AP003011) (380 aa) fasta scores: E(): 2.8e-29, 35.97% id in 353 aa, and to Rhizobium loti rnd efflux membrane fusion protein mll5519 SWALL:Q98BL6 (EMBL:AP003006) (356 aa) fasta scores: E(): 1.4e-28, 35.53% id in 363 aa; lipoprotein complement(1822892..1824007) Burkholderia pseudomallei K96243 3094780 YP_108189.1 CDS BPSL1569 NC_006350.1 1824198 1824836 D Similar to Caulobacter crescentus transcriptional regulator, TetR family cc0732 SWALL:Q9AA74 (EMBL:AE005748) (215 aa) fasta scores: E(): 1.3e-06, 38.46% id in 91 aa, and to Streptomyces coelicolor TetR-family regulator sco7303 or sc5f8.13 SWALL:Q9K4L1 (EMBL:AL357613) (193 aa) fasta scores: E(): 3.2e-05, 30.5% id in 177 aa; TetR family regulatory protein 1824198..1824836 Burkholderia pseudomallei K96243 3094781 YP_108190.1 CDS BPSL1570 NC_006350.1 1825126 1826961 R Similar to Salmonella typhimurium voltage-gated clc-type chloride channel EriC or stm0203 SWALL:ERIC_SALTY (SWALL:Q8ZRP8) (473 aa) fasta scores: E(): 1.8e-25, 28.38% id in 458 aa, and to Ralstonia solanacearum chloride channel protein eric-like rsp0020 or rs01992 SWALL:ERIL_RALSO (SWALL:Q8XTT4) (461 aa) fasta scores: E(): 2.9e-85, 54.56% id in 438 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; voltage-gated ClC-type chloride channel ClcB complement(1825126..1826961) Burkholderia pseudomallei K96243 3094589 YP_108191.1 CDS BPSL1571 NC_006350.1 1826975 1828045 R Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YeiH or b2158 or z3415 or ecs3050 SWALL:YEIH_ECOLI (SWALL:P33019) (349 aa) fasta scores: E(): 1.1e-39, 37.79% id in 336 aa, and to Pseudomonas aeruginosa hypothetical protein pa5383 SWALL:Q9HTI1 (EMBL:AE004951) (355 aa) fasta scores: E(): 3.7e-44, 44.51% id in 328 aa; hypothetical protein complement(1826975..1828045) Burkholderia pseudomallei K96243 3094590 YP_108192.1 CDS BPSL1572 NC_006350.1 1828156 1829058 D Similar to Thiobacillus denitrificans CbbR SWALL:Q9APD4 (EMBL:AF307090) (316 aa) fasta scores: E(): 1e-21, 32.65% id in 297 aa, and to Chromatium vinosum rubisco operon transcriptional regulator RbcR SWALL:RBCR_CHRVI (SWALL:P25544) (302 aa) fasta scores: E(): 1e-20, 32.99% id in 297 aa; LysR family transcriptional regulator 1828156..1829058 Burkholderia pseudomallei K96243 3091969 YP_108193.1 CDS BPSL1573 NC_006350.1 1829120 1829566 R hypothetical protein complement(1829120..1829566) Burkholderia pseudomallei K96243 3091970 YP_108194.1 CDS BPSL1574 NC_006350.1 1829790 1830554 D Similar to Pseudomonas aeruginosa hypothetical protein pa2260 or KguE SWALL:Q9I1L3 (EMBL:AE004652) (260 aa) fasta scores: E(): 2.3e-17, 36.36% id in 253 aa; hypothetical protein 1829790..1830554 Burkholderia pseudomallei K96243 3093366 YP_108195.1 CDS BPSL1575 NC_006350.1 1830638 1831627 D Similar to Pseudomonas aeruginosa probable 2-ketogluconate kinase pa2261 SWALL:Q9I1L2 (EMBL:AE004652) (316 aa) fasta scores: E(): 3.5e-65, 61.81% id in 309 aa, and to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 1.4e-14, 33.1% id in 287 aa; sugar kinase 1830638..1831627 Burkholderia pseudomallei K96243 3093367 YP_108196.1 CDS BPSL1576 NC_006350.1 1831712 1832989 D Similar to Pseudomonas aeruginosa probable 2-ketogluconate transporter pa2262 or KguT SWALL:Q9I1L1 (EMBL:AE004652) (435 aa) fasta scores: E(): 5.4e-116, 73.2% id in 403 aa, and to Yersinia pestis sugar transporter ypo2535 SWALL:Q8ZDM7 (EMBL:AJ414152) (443 aa) fasta scores: E(): 1.4e-45, 34.53% id in 417 aa; transport related membrane protein 1831712..1832989 Burkholderia pseudomallei K96243 3092376 YP_108197.1 CDS tkrA NC_006350.1 1832994 1833971 D Similar to Erwinia herbicola 2-ketogluconate reductase TkrA SWALL:TKRA_ERWHE (SWALL:P58000) (323 aa) fasta scores: E(): 3.7e-57, 54.79% id in 323 aa, and to Yersinia pestis D-isomer specific 2-hydroxyacid dehydrogenase ypo4078 SWALL:Q8Z9W1 (EMBL:AJ414160) (326 aa) fasta scores: E(): 5.6e-64, 58.51% id in 323 aa; 2-ketogluconate reductase 1832994..1833971 Burkholderia pseudomallei K96243 3094802 YP_108198.1 CDS BPSL1578 NC_006350.1 1834579 1835622 D Similar to Bacillus subtilis kdg operon repressor KdgR SWALL:KDGR_BACSU (SWALL:P50844) (339 aa) fasta scores: E(): 2.6e-32, 33.83% id in 334 aa, and to Clostridium acetobutylicum kdg operon repressor cac0393 SWALL:Q97M07 (EMBL:AE007554) (344 aa) fasta scores: E(): 1.8e-28, 32.94% id in 343 aa; LacI family transcriptional regulator 1834579..1835622 Burkholderia pseudomallei K96243 3092377 YP_108199.1 CDS BPSL1579 NC_006350.1 1835680 1836468 D Similar to Ralstonia solanacearum lipoprotein transmembrane rsp0010 or rs01982 SWALL:Q8XTU4 (EMBL:AL646076) (265 aa) fasta scores: E(): 1.8e-29, 39.39% id in 264 aa, and to Streptococcus pneumoniae R6 conserved hypothetical protein spr1248 SWALL:AAL00052 (EMBL:AE008496) (250 aa) fasta scores: E(): 2.3e-12, 28.95% id in 259 aa; hypothetical protein 1835680..1836468 Burkholderia pseudomallei K96243 3093531 YP_108200.1 CDS BPSL1580 NC_006350.1 1836483 1836845 D hypothetical protein 1836483..1836845 Burkholderia pseudomallei K96243 3093532 YP_108201.1 CDS BPSL1581 NC_006350.1 1837334 1837768 R Similar to Ralstonia solanacearum hypothetical protein rsp1250 or rs03194 SWALL:Q8XQH5 (EMBL:AL646083) (147 aa) fasta scores: E(): 1.6e-40, 79.72% id in 143 aa; hypothetical protein complement(1837334..1837768) Burkholderia pseudomallei K96243 3093560 YP_108202.1 CDS BPSL1582 NC_006350.1 1837965 1838984 D Similar to Comamonas acidovorans polyhydroxybutyrate depolymerase PhaZ SWALL:O05527 (EMBL:AB003186) (494 aa) fasta scores: E(): 7.1e-45, 45.69% id in 302 aa, and to Streptomyces exfoliatus poly PhaZ SWALL:Q54070 (EMBL:U58990) (488 aa) fasta scores: E(): 8.4e-32, 35.35% id in 297 aa; depolymerase 1837965..1838984 Burkholderia pseudomallei K96243 3093561 YP_108203.1 CDS BPSL1583 NC_006350.1 1839642 1840157 R hypothetical protein complement(1839642..1840157) Burkholderia pseudomallei K96243 3091719 YP_108204.1 CDS BPSL1588 NC_006350.1 1842086 1842547 D Similar to Pseudomonas putida transcriptional regulator SWALL:Q93FY6 (EMBL:AF302763) (153 aa) fasta scores: E(): 9.5e-33, 64% id in 150 aa, and to Rhizobium loti transcriptional regulator mll4468 SWALL:Q98E02 (EMBL:AP003004) (142 aa) fasta scores: E(): 9.4e-19, 46.8% id in 141 aa; AsnC family transcriptional regulator 1842086..1842547 Burkholderia pseudomallei K96243 3093966 YP_108205.1 CDS BPSL1589 NC_006350.1 1842602 1843684 D hypothetical protein 1842602..1843684 Burkholderia pseudomallei K96243 3093967 YP_108206.1 CDS BPSL1590 NC_006350.1 1843714 1844196 R hypothetical protein complement(1843714..1844196) Burkholderia pseudomallei K96243 3093590 YP_108207.1 CDS BPSL1591 NC_006350.1 1844497 1845597 D Similar to Agrobacterium tumefaciens dehydrogenase atu0946 or agr_c_1727 SWALL:Q8UGT9 (EMBL:AE009059) (366 aa) fasta scores: E(): 1.7e-70, 54.77% id in 356 aa, and to Rhizobium meliloti hypothetical protein r03032 or smc02503 SWALL:Q92LL0 (EMBL:AL591792) (367 aa) fasta scores: E(): 2.7e-68, 52.52% id in 356 aa; hypothetical protein 1844497..1845597 Burkholderia pseudomallei K96243 3093591 YP_108208.1 CDS BPSL1592 NC_006350.1 1845797 1846417 R Similar to Clostridium acetobutylicum predicted P-loop ATPase cac1583 SWALL:Q97IQ7 (EMBL:AE007668) (187 aa) fasta scores: E(): 3.2e-09, 32.44% id in 188 aa; ATP-ase complement(1845797..1846417) Burkholderia pseudomallei K96243 3093904 YP_108209.1 CDS BPSL1593 NC_006350.1 1846747 1847757 D Similar to Ralstonia solanacearum probable magnesium and cobalt transport transmembrane protein rsp0665 or rs01784 SWALL:Q8XS16 (EMBL:AL646080) (323 aa) fasta scores: E(): 4.6e-51, 44.61% id in 325 aa, and to Xanthomonas campestris magnesium and cobalt transport protein CorA or xcc2335 SWALL:AAM41613 (EMBL:AE012341) (332 aa) fasta scores: E(): 2.5e-44, 40.79% id in 326 aa; metal ion transport protein 1846747..1847757 Burkholderia pseudomallei K96243 3091673 YP_108210.2 CDS BPSL1594 NC_006350.1 1847765 1848055 R unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; hypothetical protein complement(1847765..1848055) Burkholderia pseudomallei K96243 3091674 YP_108211.1 CDS BPSL1595 NC_006350.1 1848607 1849047 D lipoprotein 1848607..1849047 Burkholderia pseudomallei K96243 3092013 YP_108212.1 CDS BPSL1596 NC_006350.1 1849709 1849972 R hypothetical protein complement(1849709..1849972) Burkholderia pseudomallei K96243 3092014 YP_108213.1 CDS BPSL1597 NC_006350.1 1850065 1850436 D hypothetical protein 1850065..1850436 Burkholderia pseudomallei K96243 3094321 YP_108214.1 CDS BPSL1598 NC_006350.1 1850780 1853209 R Similar to Pseudomonas aeruginosa hypothetical protein pa1408 SWALL:Q9I3T6 (EMBL:AE004570) (807 aa) fasta scores: E(): 1.7e-101, 44.54% id in 806 aa, and to Rhizobium meliloti hypothetical transmembrane protein r00938 or smc00028 SWALL:Q92RE2 (EMBL:AL591785) (871 aa) fasta scores: E(): 8.9e-50, 30.95% id in 814 aa, and to parts of Escherichia coli potassium efflux system KefA or AefA or b0465 SWALL:KEFA_ECOLI (SWALL:P77338) (1120 aa) fasta scores: E(): 8.4e-19, 26.16% id in 711 aa; transport-related, membrane protein complement(1850780..1853209) Burkholderia pseudomallei K96243 3094322 YP_108215.1 CDS BPSL1599 NC_006350.1 1853587 1855728 R Similar to Pseudomonas aeruginosa regulatory protein pa3391 SWALL:NSR1_PSEAE (SWALL:Q9HYL3) (715 aa) fasta scores: E(): 7.3e-71, 39.01% id in 692 aa, and to Pseudomonas stutzeri regulatory protein NosR SWALL:NOSR_PSEST (SWALL:Q00790) (724 aa) fasta scores: E(): 1e-67, 38.32% id in 694 aa; membrane linked regulatory protein complement(1853587..1855728) Burkholderia pseudomallei K96243 3091843 YP_108216.1 CDS BPSL1600 NC_006350.1 1855778 1856272 R Similar to Xanthomonas axonopodis cytochrome c5 xac0273 SWALL:AAM35165 (EMBL:AE011652) (172 aa) fasta scores: E(): 2.8e-10, 42.85% id in 147 aa, and C-terminal region highly similar to Chlorobium limicola f.sp. thiosulfatophilum cytochrome c-555 SWALL:C555_CHLLT (SWALL:P00123) (86 aa) fasta scores: E(): 3.2e-07, 43.75% id in 80 aa; cytochrome c-related lipoprotein complement(1855778..1856272) Burkholderia pseudomallei K96243 3091844 YP_108217.1 CDS BPSL1601 NC_006350.1 1856294 1856698 R Very low similarity to Streptomyces coelicolor hypothetical protein sco1549 or scl11.05C SWALL:Q9L1D3 (EMBL:AL157953) (312 aa) fasta scores: E(): 6.6, 31.09% id in 119 aa; hypothetical protein complement(1856294..1856698) Burkholderia pseudomallei K96243 3094123 YP_108218.1 CDS BPSL1602 NC_006350.1 1856701 1856970 R Very low similarity to Streptomyces coelicolor hypothetical protein sco6897 or sc1b2.03 SWALL:Q9KYD3 (EMBL:AL356812) (103 aa) fasta scores: E(): 4.7, 36.48% id in 74 aa; hypothetical protein complement(1856701..1856970) Burkholderia pseudomallei K96243 3094124 YP_108219.1 CDS BPSL1603 NC_006350.1 1856981 1857511 R Similar to Ralstonia solanacearum probable NosL lipoprotein rsp1373 or rs02085 SWALL:Q8XQB3 (EMBL:AL646084) (176 aa) fasta scores: E(): 3.7e-29, 48.58% id in 177 aa, and to Pseudomonas stutzeri NosL protein precursor SWALL:Q52529 (EMBL:Z69589) (190 aa) fasta scores: E(): 2.6e-13, 36.47% id in 170 aa; lipoprotein complement(1856981..1857511) Burkholderia pseudomallei K96243 3091981 YP_108220.1 CDS BPSL1604 NC_006350.1 1857508 1858344 R Similar to Ralstonia solanacearum probable NosY transmembrane protein or rsp1372 or rs02086 SWALL:Q8XQB4 (EMBL:AL646084) (274 aa) fasta scores: E(): 9e-58, 62.26% id in 265 aa, and to Pseudomonas stutzeri membrane protein NosY precursor SWALL:NOSY_PSEST (SWALL:P19845) (276 aa) fasta scores: E(): 5.1e-37, 46.88% id in 273 aa; hypothetical protein complement(1857508..1858344) Burkholderia pseudomallei K96243 3091982 YP_108221.1 CDS BPSL1605 NC_006350.1 1858341 1859255 R Similar to Ralstonia solanacearum probable copper ATP-binding ABC transporter protein rsp1371 or rs02087 SWALL:Q8XQB5 (EMBL:AL646084) (314 aa) fasta scores: E(): 4.5e-50, 55.77% id in 303 aa, and to Pseudomonas stutzeri copper transport ATP-binding protein NosF SWALL:NOSF_PSEST (SWALL:P19844) (308 aa) fasta scores: E(): 9.8e-35, 43.47% id in 299 aa; copper-related ABC transporter ATP-binding protein complement(1858341..1859255) Burkholderia pseudomallei K96243 3091677 YP_108222.1 CDS BPSL1606 NC_006350.1 1859252 1860502 R Similar to Ralstonia solanacearum probable copper-binding periplasmic signal peptide protein rsp1370 or rs02088 SWALL:Q8XQB6 (EMBL:AL646084) (423 aa) fasta scores: E(): 2.5e-73, 59.36% id in 406 aa, and to Pseudomonas stutzeri copper-binding periplasmic protein precursor NosD SWALL:NOSD_PSEST (SWALL:P19843) (436 aa) fasta scores: E(): 6.3e-24, 38.71% id in 372 aa; copper-binding periplasmic protein complement(1859252..1860502) Burkholderia pseudomallei K96243 3091678 YP_108223.1 CDS nosZ NC_006350.1 1860683 1862650 R reduces nitrous oxide to nitrogen; nitrous-oxide reductase complement(1860683..1862650) Burkholderia pseudomallei K96243 3093662 YP_108224.1 CDS BPSL1608 NC_006350.1 1863332 1864390 D Similar to Ralstonia solanacearum probable thiamine biosynthesis ApbE transmembrane protein rsp1366 or rs02092 SWALL:Q8XQC0 (EMBL:AL646084) (340 aa) fasta scores: E(): 5.6e-20, 33.13% id in 335 aa, and to Salmonella typhimurium thiamine biosynthesis lipoprotein ApbE precursor or stm2266 SWALL:APBE_SALTY (SWALL:P41780) (350 aa) fasta scores: E(): 7.7e-16, 27.21% id in 316 aa; thiamine biosynthesis lipoprotein 1863332..1864390 Burkholderia pseudomallei K96243 3094171 YP_108225.1 CDS BPSL1609 NC_006350.1 1864412 1865416 D Similar to Methanosarcina acetivorans multidrug ABC transporter ATP-binding protein ma2689 SWALL:Q8TMH0 (EMBL:AE010965) (323 aa) fasta scores: E(): 7.2e-24, 32% id in 325 aa, and to Rhizobium meliloti ABC transporter ATP-binding protein rb0184 or smb20184 SWALL:Q92WX8 (EMBL:AL603642) (242 aa) fasta scores: E(): 6.6e-23, 41.78% id in 213 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; ABC transporter ATP-binding protein 1864412..1865416 Burkholderia pseudomallei K96243 3094172 YP_108226.1 CDS BPSL1610 NC_006350.1 1865413 1866153 D Similar to Methanosarcina acetivorans multidrug ABC transporter permease ma2109 SWALL:Q8TP17 (EMBL:AE010897) (250 aa) fasta scores: E(): 1.5e-22, 34.67% id in 248 aa, and to Pyrococcus furiosus daunorubicin resistance membrane protein pf0582 SWALL:Q8U388 (EMBL:AE010180) (254 aa) fasta scores: E(): 2.8e-18, 32.08% id in 240 aa; ABC transporter membrane protein 1865413..1866153 Burkholderia pseudomallei K96243 3094497 YP_108227.1 CDS BPSL1611 NC_006350.1 1866328 1867917 D Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 8.7e-45, 38.66% id in 538 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc0606 or rs06104 SWALL:Q8Y1T3 (EMBL:AL646060) (617 aa) fasta scores: E(): 1.6e-46, 44.98% id in 429 aa; methyl-accepting chemotaxis transmembrane protein 1866328..1867917 Burkholderia pseudomallei K96243 3094498 YP_108228.1 CDS BPSL1612 NC_006350.1 1868038 1868523 D hypothetical protein 1868038..1868523 Burkholderia pseudomallei K96243 3093237 YP_108229.1 CDS BPSL1613 NC_006350.1 1868738 1870450 D in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 1868738..1870450 Burkholderia pseudomallei K96243 3093238 YP_108230.1 CDS BPSL1614 NC_006350.1 1870831 1871871 R No significant database matches to the full length CDS. C-terminus is is weakly similar to C-terminal region of Pseudomonas sp. vanillate O-demethylase oxygenase subunit VanA SWALL:VANA_PSES9 (SWALL:P12609) (329 aa) fasta scores: E(): 2.9e-05, 26.1% id in 272 aa; hypothetical protein complement(1870831..1871871) Burkholderia pseudomallei K96243 3091959 YP_108231.1 CDS BPSL1615 NC_006350.1 <1871907 1872869 R No significant database matches to the full length CDS. N-terminus is weakly similar to the N-terminal region of Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 2e-06, 29.46% id in 207 aa; iron-sulfur protein complement(<1871907..1872869) Burkholderia pseudomallei K96243 3091960 YP_108232.1 CDS BPSL1616 NC_006350.1 1872876 1874255 R Similar to Streptomyces viridochromogenes transporter AviJ SWALL:Q93KW8 (EMBL:AF333038) (476 aa) fasta scores: E(): 3.6e-37, 35.1% id in 433 aa, and to Actinosynnema pretiosum Na+/H+ antiporter Asm5 SWALL:AAM54083 (EMBL:AF453501) (416 aa) fasta scores: E(): 5.2e-31, 35.55% id in 405 aa; transport related membrane protein complement(1872876..1874255) Burkholderia pseudomallei K96243 3093652 YP_108233.1 CDS BPSL1617 NC_006350.1 1874296 1875738 R Similar to Amycolatopsis orientalis hypothetical hydroxylase A SWALL:P96563 (EMBL:U84350) (491 aa) fasta scores: E(): 1.1e-44, 35.74% id in 414 aa, and to Amycolatopsis mediterranei halogenase BhaA SWALL:O87676 (EMBL:Y16952) (491 aa) fasta scores: E(): 1.5e-43, 34.78% id in 414 aa; hydroxylase complement(1874296..1875738) Burkholderia pseudomallei K96243 3093653 YP_108234.1 CDS BPSL1618 NC_006350.1 1875876 1876574 R hypothetical protein complement(1875876..1876574) Burkholderia pseudomallei K96243 3092088 YP_108235.1 CDS BPSL1621 NC_006350.1 1878828 1879178 D hypothetical protein 1878828..1879178 Burkholderia pseudomallei K96243 3092749 YP_108236.1 CDS BPSL1622 NC_006350.1 1879312 1880082 D hypothetical protein 1879312..1880082 Burkholderia pseudomallei K96243 3092750 YP_108237.1 CDS BPSL1623 NC_006350.1 1880385 1881473 R Similar to Rhizobium loti polyhydroxybutyrate depolymerase mlr2444 SWALL:Q98IE0 (EMBL:AP002999) (371 aa) fasta scores: E(): 5.5e-17, 30.51% id in 331 aa, and to Alcaligenes faecalis poly(3-hydroxybutyrate) depolymerase precursor(PHB depolymerase) SWALL:PHB_ALCFA (SWALL:P12625) (488 aa) fasta scores: E(): 7.9e-08, 27.11% id in 295 aa; hypothetical protein complement(1880385..1881473) Burkholderia pseudomallei K96243 3092283 YP_108238.1 CDS BPSL1624 NC_006350.1 1881764 1881955 R hypothetical protein complement(1881764..1881955) Burkholderia pseudomallei K96243 3092284 YP_108239.1 CDS BPSL1625 NC_006350.1 1882057 1882524 D Similar to Xanthomonas axonopodis hypothetical protein xac1124 SWALL:AAM35997 (EMBL:AE011741) (146 aa) fasta scores: E(): 1.5e-24, 50% id in 146 aa, and to Synechocystis sp. hypothetical protein slr0325 SWALL:Q55530 (EMBL:D63999) (161 aa) fasta scores: E(): 5.2e-22, 45.07% id in 142 aa; hypothetical protein 1882057..1882524 Burkholderia pseudomallei K96243 3091575 YP_108240.1 CDS BPSL1626 NC_006350.1 1883679 1884209 D Similar to Salmonella typhimurium type-1 fimbrial protein, A chain precursor FimA or stm0543 SWALL:FM1A_SALTY (SWALL:P37921) (185 aa) fasta scores: E(): 1.8e-12, 32.44% id in 188 aa, and to Klebsiella pneumoniae fimbrial subunit type 1 precursor Fim SWALL:FM12_KLEPN (SWALL:P12903) (182 aa) fasta scores: E(): 3e-12, 35.67% id in 185 aa; fimbrial subunit type 1 1883679..1884209 Burkholderia pseudomallei K96243 3091576 YP_108241.1 CDS BPSL1627 NC_006350.1 1884308 1885078 D Similar to Pseudomonas aeruginosa probable pili assembly chaperone pa0993 SWALL:Q9I4X6 (EMBL:AE004532) (237 aa) fasta scores: E(): 5.8e-28, 42.14% id in 242 aa, and to Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 1.2e-21, 33.19% id in 232 aa; fimbrial assembly chaperone 1884308..1885078 Burkholderia pseudomallei K96243 3092023 YP_108242.1 CDS BPSL1628 NC_006350.1 1885085 1887637 D Similar to Salmonella typhimurium fimbrial usher StiC or stm0175 SWALL:Q8ZRR6 (EMBL:AE008702) (848 aa) fasta scores: E(): 1.6e-89, 34.28% id in 872 aa, and to Escherichia coli outer membrane usher protein AfaC precursor SWALL:AFAC_ECOLI (SWALL:P53517) (859 aa) fasta scores: E(): 9.4e-79, 32% id in 881 aa; fimbrial usher protein 1885085..1887637 Burkholderia pseudomallei K96243 3092024 YP_108243.1 CDS BPSL1629 NC_006350.1 1887634 1888599 D Similar to Escherichia coli type-1 fimbrial protein, A chain precursor FimA or PilA or b4314 SWALL:FM1A_ECOLI (SWALL:P04128) (182 aa) fasta scores: E(): 4.9e-09, 35.32% id in 167 aa, and to Xylella fastidiosa fimbrial adhesin precursor xf0077 SWALL:Q9PH69 (EMBL:AE003862) (356 aa) fasta scores: E(): 3.5e-10, 34.14% id in 246 aa. Note: This CDS has no similarities to any database matches in its N-terminal region; type-1 fimbrial protein subunit A 1887634..1888599 Burkholderia pseudomallei K96243 3094243 YP_108244.1 CDS BPSL1630 NC_006350.1 1889376 1889627 D hypothetical protein 1889376..1889627 Burkholderia pseudomallei K96243 3094244 YP_108245.1 CDS BPSL1631 NC_006350.1 1889771 1893145 D Similar to the N-terminal region of Xanthomonas axonopodis outer membrane protein XadA or xac3546 SWALL:AAM38389 (EMBL:AE012003) (2190 aa) fasta scores: E(): 5.2e-56, 36.63% id in 1111 aa, and to full length of Xanthomonas oryzae pv. oryzae outer membrane protein XadA SWALL:Q9FDA0 (EMBL:AF288222) (1265 aa) fasta scores: E(): 1.8e-37, 29.89% id in 1278 aa. Note: Contains a repeat region between approx. residue 436 and residue 862, containing the repeat: NSTA(N/S)GTN(ST/AS)A(S/T)G(D/E). It is also similar to BPSS0088 (646 aa) fasta scores: E(): 2.9e-64, 56.604% identity in 636 aa overlap over the mentioned repeat region; outer membrane protein 1889771..1893145 Burkholderia pseudomallei K96243 3094819 YP_108246.1 CDS BPSL1632 NC_006350.1 1894492 1894977 D hypothetical protein 1894492..1894977 Burkholderia pseudomallei K96243 3094820 YP_108247.1 CDS BPSL1633 NC_006350.1 1895264 1895929 D Similar to Escherichia coli, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 6.4e-17, 32.21% id in 208 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa3714 SWALL:Q9HXS7 (EMBL:AE004790) (213 aa) fasta scores: E(): 1.2e-19, 36.15% id in 213 aa; two-component system, response regulator 1895264..1895929 Burkholderia pseudomallei K96243 3092021 YP_108248.1 CDS BPSL1634 NC_006350.1 1895929 1899177 D Similar to Escherichia coli sensor protein RcsC or b2218 SWALL:RCSC_ECOLI (SWALL:P14376) (949 aa) fasta scores: E(): 7.1e-44, 27.18% id in 986 aa, and to Ralstonia solanacearum probable capsular synthesis regulatory rsp1622 or rs02179 SWALL:Q8XPL6 (EMBL:AL646086) (1098 aa) fasta scores: E(): 2.9e-52, 28.9% id in 993 aa.Note: This CDS appears to have a histidine kinase domain and a response regulator domain also; two-component regulatory system sensor kinase 1895929..1899177 Burkholderia pseudomallei K96243 3092022 YP_108249.1 CDS BPSL1635 NC_006350.1 1899405 1900298 D Similar to the C-terminal region of Xanthomonas axonopodis GGDEF family protein xac1938 SWALL:AAM36800 (EMBL:AE011829) (695 aa) fasta scores: E(): 1.3e-22, 33.57% id in 280 aa, and of Escherichia coli hypothetical protein YddU or b1489 SWALL:YDDU_ECOLI (SWALL:P76129) (799 aa) fasta scores: E(): 3.1e-21, 31.07% id in 251 aa; hypothetical protein 1899405..1900298 Burkholderia pseudomallei K96243 3091764 YP_108250.1 CDS BPSL1636 NC_006350.1 1901631 1901939 D Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 5.8e-08, 37.63% id in 93 aa, and to Rhodobacter capsulatus trans-acting regulatory protein HvrA SWALL:HVRA_RHOCA (SWALL:P42505) (102 aa) fasta scores: E(): 0.025, 30.12% id in 83 aa; regulatory protein 1901631..1901939 Burkholderia pseudomallei K96243 3091765 YP_108251.1 CDS BPSL1637 NC_006350.1 1902196 1903266 R Only very low similarity to the central region of Arabidopsis thaliana lipase, t4k22.3 SWALL:Q9C8G6 (EMBL:AC025295) (529 aa) fasta scores: E(): 0.37, 31.77% id in 107 aa; lipase complement(1902196..1903266) Burkholderia pseudomallei K96243 3091643 YP_108252.1 CDS BPSL1642 NC_006350.1 1904965 1905735 D Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu4232 or agr_l_1259 SWALL:Q8U867 (EMBL:AE009352) (245 aa) fasta scores: E(): 6.6e-30, 45.7% id in 221 aa, and to Rhizobium loti transcriptional regulator mll6786 SWALL:Q988D5 (EMBL:AP003010) (223 aa) fasta scores: E(): 2.3e-19, 37.15% id in 218 aa; GntR family transcriptional regulator 1904965..1905735 Burkholderia pseudomallei K96243 3091884 YP_108253.1 CDS BPSL1643 NC_006350.1 1906033 1906620 D Similar to Rhizobium meliloti hypothetical protein ra0427 or sma0791 SWALL:Q92ZM8 (EMBL:AE007233) (200 aa) fasta scores: E(): 7.8e-54, 71.05% id in 190 aa, and to Agrobacterium tumefaciens hypothetical protein atu4237 or agr_l_1248 SWALL:Q8U862 (EMBL:AE009353) (200 aa) fasta scores: E(): 1.2e-53, 69.74% id in 195 aa; hypothetical protein 1906033..1906620 Burkholderia pseudomallei K96243 3091885 YP_108254.1 CDS BPSL1644 NC_006350.1 1906610 1907494 D Similar to Agrobacterium tumefaciens hydrolase atu4238 or agr_l_1247 SWALL:Q8U861 (EMBL:AE009353) (286 aa) fasta scores: E(): 7.7e-32, 42.22% id in 270 aa, and to Bacillus subtilis esterase YtxM SWALL:YTXM_BACSU (SWALL:P23974) (274 aa) fasta scores: E(): 2.4e-12, 25.84% id in 267 aa; hydrolase 1906610..1907494 Burkholderia pseudomallei K96243 3092620 YP_108255.1 CDS BPSL1645 NC_006350.1 1907487 1908443 D Similar to Agrobacterium tumefaciens nitrilotriacetate monooxygenase component B atu5229 or agr_pat_322 SWALL:Q8UK94 (EMBL:AE008945) (323 aa) fasta scores: E(): 2.9e-40, 41.66% id in 312 aa, and N-terminal region to Chelatobacter heintzii nitrilotriacetate monooxygenase component B NtaB or NmoB SWALL:NTAB_CHEHE (SWALL:P54990) (322 aa) fasta scores: E(): 1.3e-25, 50.58% id in 172 aa; oxygenase 1907487..1908443 Burkholderia pseudomallei K96243 3092621 YP_108256.1 CDS BPSL1646 NC_006350.1 1908552 1909595 D Similar to Rhizobium meliloti hypothetical protein ra0430 or sma0794 SWALL:Q92ZM5 (EMBL:AE007233) (346 aa) fasta scores: E(): 1.2e-85, 58.67% id in 346 aa, and to Agrobacterium tumefaciens alkanal monooxygenase alpha chain atu4240 or agr_l_1243 SWALL:Q8U859 (EMBL:AE009353) (346 aa) fasta scores: E(): 6.8e-84, 58.38% id in 346 aa; monooxygenase 1908552..1909595 Burkholderia pseudomallei K96243 3091978 YP_108257.1 CDS BPSL1647 NC_006350.1 1909639 1911111 D Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 3.8e-66, 40.74% id in 481 aa, and to Agrobacterium tumefaciens aldehyde dehydrogenase DhaS or atu4241 or agr_l_1241 SWALL:Q8U858 (EMBL:AE009353) (493 aa) fasta scores: E(): 2.8e-137, 70.87% id in 491 aa; betaine aldehyde dehydrogenase 1909639..1911111 Burkholderia pseudomallei K96243 3091979 YP_108258.1 CDS BPSL1648 NC_006350.1 1911181 1911495 D Similar to Rhizobium meliloti hypothetical protein ra0432 or sma0797 SWALL:Q92ZM3 (EMBL:AE007233) (108 aa) fasta scores: E(): 1.7e-27, 69.6% id in 102 aa, and to Agrobacterium tumefaciens hypothetical protein atu4242 or agr_l_1239 SWALL:Q8U857 (EMBL:AE009353) (104 aa) fasta scores: E(): 2.9e-26, 67.96% id in 103 aa; hypothetical protein 1911181..1911495 Burkholderia pseudomallei K96243 3093155 YP_108259.1 CDS BPSL1649 NC_006350.1 1911565 1912596 D Similar to Escherichia coli spermidine/putrescine-binding periplasmic protein precursor PotD or b1123 SWALL:POTD_ECOLI (SWALL:P23861) (348 aa) fasta scores: E(): 5.8e-12, 26.25% id in 320 aa, to Agrobacterium tumefaciens ABC transporter substrate binding protein atu4243 or agr_l_1237 SWALL:Q8U856 (EMBL:AE009353) (336 aa) fasta scores: E(): 6.2e-86, 63.09% id in 336 aa, and to Rhizobium meliloti ABC transporter periplasmic solute-binding protein ra0433 or sma0799 SWALL:Q92ZM2 (EMBL:AE007234) (319 aa) fasta scores: E(): 2.4e-82, 64.57% id in 319 aa; ABC transporter substrate-binding protein 1911565..1912596 Burkholderia pseudomallei K96243 3093156 YP_108260.1 CDS BPSL1650 NC_006350.1 1912675 1913559 D Similar to Escherichia coli spermidine/putrescine transport system permease PotB or b1125 SWALL:POTB_ECOLI (SWALL:P23860) (275 aa) fasta scores: E(): 8.4e-25, 35.57% id in 253 aa, and to Rhizobium meliloti ABC transporter permease ra0434 or sma0800 SWALL:Q92ZM1 (EMBL:AE007234) (291 aa) fasta scores: E(): 1.5e-66, 66.07% id in 280 aa; ABC transporter permease 1912675..1913559 Burkholderia pseudomallei K96243 3093723 YP_108261.1 CDS BPSL1651 NC_006350.1 1913561 1914355 D Similar to Escherichia coli, and Escherichia coli O157:H7 spermidine/putrescine transport system permease PotC or b1124 or z1763 or ecs1500 SWALL:POTC_ECOLI (SWALL:P23859) (264 aa) fasta scores: E(): 5.5e-19, 29.13% id in 254 aa, and to Rhizobium meliloti ABC transporter permease ra0435 or sma0802 SWALL:Q92ZM0 (EMBL:AE007234) (266 aa) fasta scores: E(): 1.5e-64, 66.41% id in 262 aa; ABC transporter permease 1913561..1914355 Burkholderia pseudomallei K96243 3093724 YP_108262.1 CDS BPSL1652 NC_006350.1 1914372 1915463 D Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 7.7e-42, 41.14% id in 350 aa, and to Rhizobium meliloti ABC-transporter ATP-binding protein ra0436 or sma0803 SWALL:Q92ZL9 (EMBL:AE007234) (359 aa) fasta scores: E(): 1.6e-71, 60.27% id in 360 aa; ABC transporter ATP-binding protein 1914372..1915463 Burkholderia pseudomallei K96243 3091679 YP_108263.1 CDS BPSL1653 NC_006350.1 1915444 1916208 D Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu4232 or agr_l_1259 SWALL:Q8U867 (EMBL:AE009352) (245 aa) fasta scores: E(): 1.1e-32, 47.59% id in 229 aa, and to Yersinia pestis GntR-family transcriptional regulatory protein ypo3651 SWALL:Q8ZAY1 (EMBL:AJ414158) (220 aa) fasta scores: E(): 3.7e-20, 37.08% id in 213 aa; GntR family transcriptional regulator 1915444..1916208 Burkholderia pseudomallei K96243 3091680 YP_108264.1 CDS gabD NC_006350.1 1916230 1917690 D NADP+; Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 2e-126, 66.45% id in 480 aa, and to Pseudomonas aeruginosa succinate-semialdehyde dehydrogenase pa0265 SWALL:Q9I6M5 (EMBL:AE004464) (483 aa) fasta scores: E(): 1e-130, 69.03% id in 478 aa; succinate-semialdehyde dehydrogenase 1916230..1917690 Burkholderia pseudomallei K96243 3094464 YP_108265.1 CDS BPSL1655 NC_006350.1 1917834 1918952 D Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.4e-45, 42.89% id in 387 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.4e-17, 31.11% id in 376 aa. Note: Also similar to BPSL3036 (387 aa) fasta scores: E(): 1.4e-51, 45.503% identity in 378 aa overlap; outer membrane porin 1917834..1918952 Burkholderia pseudomallei K96243 3093497 YP_108266.1 CDS BPSL1656 NC_006350.1 1919077 1919367 D hypothetical protein 1919077..1919367 Burkholderia pseudomallei K96243 3093498 YP_108267.1 CDS BPSL1657 NC_006350.1 1919543 1920376 R Similar to the C-terminal region of Xanthomonas campestris insertion element IS476 hypothetical protein SWALL:YI61_XANCV (SWALL:P25438) (346 aa) fasta scores: E(): 1.3e-63, 61.5% id in 265 aa, and to the full length Ralstonia solanacearum ISRso14-transposase OrfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 5.9e-98, 86.86% id in 274 aa; hypothetical protein complement(1919543..1920376) Burkholderia pseudomallei K96243 3094585 YP_108268.1 CDS BPSL1658 NC_006350.1 1920400 1920663 R Identical to Burkholderia cepacia insertion element IS407 hypothetical protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa, and higly similar to to Ralstonia solanacearum ISRso14-transposase orfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa; hypothetical protein complement(1920400..1920663) Burkholderia pseudomallei K96243 3094586 YP_108269.1 CDS BPSL1658a NC_006350.1 1921337 1921723 D Similar to Alcaligenes eutrophus HNS-like protein phg180 SWALL:Q7WXF4 (EMBL:AY305378) (103 aa) fasta scores: E(): 1.6e-07, 35% id in 100 aa, and to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 2.5e-10, 41.05% id in 95 aa. Possible alternative translational start site; DNA-biding protein, H-NS-like 1921337..1921723 Burkholderia pseudomallei K96243 3094499 YP_108270.1 CDS BPSL1659 NC_006350.1 1922210 1923109 D C-terminal region similar to C-terminal region of Escherichia coli, and Escherichia coli O157:H7 outer membrane protein A precursor OmpA or TolG or Tut or Con or b0957 or z1307 or ecs1041 SWALL:OMPA_ECOLI (SWALL:P02934) (346 aa) fasta scores: E(): 2.1e-12, 38.36% id in 159 aa. N-terminal region has low similarities to exported proteins/lipoproteins; hypothetical protein 1922210..1923109 Burkholderia pseudomallei K96243 3094500 YP_108271.1 CDS BPSL1660 NC_006350.1 1923238 1925037 D Similar to Xanthomonas maltophilia SmeC SWALL:Q9RBY7 (EMBL:AF173226) (471 aa) fasta scores: E(): 2.3e-06, 23.89% id in 477 aa, and to Caulobacter crescentus outer membrane protein RsaF SWALL:Q9RQV0 (EMBL:AF062345) (527 aa) fasta scores: E(): 1.4e-05, 23.3% id in 532 aa; outer membrane protein 1923238..1925037 Burkholderia pseudomallei K96243 3094713 YP_108272.1 CDS BPSL1661 NC_006350.1 1925148 1934837 D Similar to the C-terminal region of Ralstonia solanacearum hemagglutinin/hemolysin-related protein rsp1180 or rs05070 SWALL:Q8XQP2 (EMBL:AL646083) (4106 aa) fasta scores: E(): 6.4e-92, 30.67% id in 3218 aa, and also to the C-terminal region of Escherichia coli O157:H7 RTX family exoprotein z0615 SWALL:Q8X4H5 (EMBL:AE005229) (5188 aa) fasta scores: E(): 4e-38, 26.08% id in 3209 aa. Note: Contains a repeat region between residue 538 and residue 1362; hemolysin-like protein 1925148..1934837 Burkholderia pseudomallei K96243 3094714 YP_108273.1 CDS BPSL1662 NC_006350.1 1934933 1935442 D hypothetical protein 1934933..1935442 Burkholderia pseudomallei K96243 3094336 YP_108274.1 CDS BPSL1663 NC_006350.1 1935439 1936314 D Similar to Ralstonia solanacearum hypothetical protein rsp0167 rsp0167 or rs04679 SWALL:Q8XTE6 (EMBL:AL646076) (304 aa) fasta scores: E(): 7.2e-38, 42.43% id in 271 aa; hypothetical protein 1935439..1936314 Burkholderia pseudomallei K96243 3094337 YP_108275.1 CDS BPSL1664 NC_006350.1 1936340 1938640 D Similar to the C-terminal region of Vibrio cholerae toxin secretion ATP-binding protein vca1084 SWALL:Q9KKL9 (EMBL:AE004433) (704 aa) fasta scores: E(): 1.4e-62, 34.99% id in 563 aa, and of Pasteurella haemolytica-like sp. leukotoxin secretion ATP-binding protein LktB SWALL:HLYB_PASSP (SWALL:P55122) (708 aa) fasta scores: E(): 5.3e-37, 27.82% id in 575 aa, and to the full length of Ralstonia solanacearum composite ATP-binding transmembrane ABC transporter protein rsp1182 or rs05072 SWALL:Q8XQP0 (EMBL:AL646083) (739 aa) fasta scores: E(): 1.6e-45, 28.65% id in 719 aa; toxin transport-related membrane protein 1936340..1938640 Burkholderia pseudomallei K96243 3091563 YP_108276.1 CDS BPSL1665 NC_006350.1 1938631 1940046 D Similar to Rhizobium meliloti toxin secretion transmembrane protein r02036 or smc04208 SWALL:Q92NX2 (EMBL:AL591789) (436 aa) fasta scores: E(): 1.6e-27, 33.25% id in 439 aa, and to Vibrio cholerae secretion protein, HlyD family vca1080 SWALL:Q9KKM3 (EMBL:AE004433) (481 aa) fasta scores: E(): 6.4e-27, 34.25% id in 435 aa; toxin-related secretion protein 1938631..1940046 Burkholderia pseudomallei K96243 3091564 YP_108277.1 CDS BPSL1666 NC_006350.1 1940157 1944521 D Very low similarities to any database matches to the full length of the CDS. The matches are reduced to the TPR domains that this CDS contains, e.g. Methanosarcina acetivorans TPR-domain containing protein ma1613 SWALL:Q8TQD1 (EMBL:AE010832) (1885 aa) fasta scores: E(): 1.6e-07, 21.22% id in 1164 aa; hypothetical protein 1940157..1944521 Burkholderia pseudomallei K96243 3093605 YP_108278.1 CDS BPSL1667 NC_006350.1 1944518 1946188 D Similar in the C-terminal region to Ralstonia solanacearum hypothetical protein rsc3164 or rs00434 SWALL:Q8XUM3 (EMBL:AL646074) (387 aa) fasta scores: E(): 1.1e-31, 36.16% id in 365 aa; hypothetical protein 1944518..1946188 Burkholderia pseudomallei K96243 3093606 YP_108279.1 CDS BPSL1668 NC_006350.1 1946220 1947071 D Similar in its C-terminal region to Bacillus subtilis probable adenylylsulfate kinase CysC SWALL:CYC1_BACSU (SWALL:O34577) (197 aa) fasta scores: E(): 6.5e-37, 51.81% id in 193 aa, and similar to the C-terminal region (where the adenylylsulfate kinase activity has been mapped) Arabidopsis thaliana adenylylsulfate kinase 1, chloroplast precursor Akn1 or at2g14750 or f26c24.11 or t6b13.1 SWALL:KAP1_ARATH (SWALL:Q43295) (276 aa) fasta scores: E(): 3.1e-33, 43.61% id in 227 aa; adenylylsulfate kinase 1946220..1947071 Burkholderia pseudomallei K96243 3093619 YP_108280.1 CDS BPSL1669 NC_006350.1 1948084 1948797 D Similar to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 3.5e-28, 40.69% id in 231 aa, and to Mycobacterium bovis sensory transduction protein Regx3 SWALL:RGX3_MYCBO (SWALL:O07130) (227 aa) fasta scores: E(): 1.4e-21, 34.51% id in 226 aa; two component system response regulator 1948084..1948797 Burkholderia pseudomallei K96243 3091933 YP_108281.1 CDS BPSL1670 NC_006350.1 1949196 1949891 R Similar to the N-terminal region of Streptomyces coelicolor transposase sco0083 or scj11.12 SWALL:Q9RI92 (EMBL:AL109949) (282 aa) fasta scores: E(): 4.8e-27, 44.63% id in 233 aa, and to the central part of Burkholderia cepacia insertion element IS402 hypothetical 16.2 kDa protein SWALL:YI22_BURCE (SWALL:P24537) (147 aa) fasta scores: E(): 3.6e-26, 64.17% id in 134 aa; transposase complement(1949196..1949891) Burkholderia pseudomallei K96243 3091934 YP_108282.1 CDS BPSL1671 NC_006350.1 1950345 1950824 D hypothetical protein 1950345..1950824 Burkholderia pseudomallei K96243 3092596 YP_108283.1 CDS BPSL1672 NC_006350.1 1951025 1952071 D hypothetical protein 1951025..1952071 Burkholderia pseudomallei K96243 3092597 YP_108284.1 CDS BPSL1674 NC_006350.1 1953075 1954175 R Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 9.4e-12, 30.14% id in 408 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 3.2e-44, 40.66% id in 391 aa; outer membrane porin complement(1953075..1954175) Burkholderia pseudomallei K96243 3092921 YP_108285.1 CDS BPSL1675 NC_006350.1 1954466 1954945 R Similar to the C-terminal region of Ralstonia solanacearum transposase Tnp SWALL:Q9RBZ6 (EMBL:AF167984) (321 aa) fasta scores: E(): 1.4e-06, 44.04% id in 84 aa, and of Burkholderia cepacia transposase SWALL:Q93L07 (EMBL:AF029344) (327 aa) fasta scores: E(): 2.1e-05, 43.21% id in 81 aa; transposase complement(1954466..1954945) Burkholderia pseudomallei K96243 3094329 YP_108286.1 CDS BPSL1676 NC_006350.1 1955029 1956663 R Similar to Rhizobium meliloti histidine ammonia-lyase ra0165 or sma0306 SWALL:Q930N0 (EMBL:AE007210) (546 aa) fasta scores: E(): 1.8e-108, 55.01% id in 538 aa, and to Rhizobium loti histidine ammonia-lyase mll7124 SWALL:Q987B4 (EMBL:AP003011) (498 aa) fasta scores: E(): 2.8e-21, 32.15% id in 510 aa. Note: Similar also to many eukaryotic proteins; exported histidine ammonia-lyase complement(1955029..1956663) Burkholderia pseudomallei K96243 3094330 YP_108287.1 CDS BPSL1677 NC_006350.1 1956681 1957964 R Similar to Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 1.9e-51, 36.72% id in 422 aa, and to Ralstonia solanacearum probable sugar-proton symporter transmembrane protein rsp0536 or rs00416 SWALL:Q8XSE0 (EMBL:AL646079) (441 aa) fasta scores: E(): 1.6e-63, 44.55% id in 404 aa; transport-related, integral membrane protein complement(1956681..1957964) Burkholderia pseudomallei K96243 3093756 YP_108288.1 CDS BPSL1678 NC_006350.1 1958040 1959680 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(1958040..1959680) Burkholderia pseudomallei K96243 3093757 YP_108289.1 CDS BPSL1679 NC_006350.1 1959699 1960790 R Similar to Agrobacterium tumefaciens hypothetical protein atu3042 or agr_l_3523 SWALL:Q8UBH4 (EMBL:AE009235) (358 aa) fasta scores: E(): 6.2e-11, 25.13% id in 366 aa, and to Rhizobium loti hypothetical protein mll9130 SWALL:Q982D2 (EMBL:AP003015) (361 aa) fasta scores: E(): 4.6e-10, 26.03% id in 338 aa; hypothetical protein complement(1959699..1960790) Burkholderia pseudomallei K96243 3093592 YP_108290.1 CDS BPSL1680 NC_006350.1 1960971 1961861 R Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 1.7e-28, 35.95% id in 292 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5085 SWALL:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 6.5e-30, 38.72% id in 297 aa; LysR family transcriptional regulator complement(1960971..1961861) Burkholderia pseudomallei K96243 3093593 YP_108291.1 CDS BPSL1681 NC_006350.1 1961961 1963346 D Similar to Bacillus subtilis allantoinase PucH SWALL:ALN_BACSU (SWALL:O32137) (446 aa) fasta scores: E(): 6.1e-31, 29.27% id in 444 aa, and to Streptomyces coelicolor probable allantoinase sco6247 or scah10.12 or stah10.12 SWALL:ALN_STRCO (SWALL:Q9RKU5) (445 aa) fasta scores: E(): 9.5e-31, 31.62% id in 449 aa; allantoinase 1961961..1963346 Burkholderia pseudomallei K96243 3094798 YP_108292.1 CDS BPSL1682 NC_006350.1 1963343 1964623 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1963343..1964623 Burkholderia pseudomallei K96243 3094799 YP_108293.1 CDS BPSL1686 NC_006350.1 1966393 1966929 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1966393..1966929 Burkholderia pseudomallei K96243 3091664 YP_108294.1 CDS BPSL1687 NC_006350.1 1966926 1967567 D Similar to Agrobacterium tumefaciens hypothetical protein atu2267 or agr_c_4120 SWALL:Q8UD60 (EMBL:AE009176) (214 aa) fasta scores: E(): 1.2e-18, 37.55% id in 213 aa, and to Caulobacter crescentus hypothetical protein cc3252 SWALL:Q9A3F2 (EMBL:AE005989) (214 aa) fasta scores: E(): 5e-18, 33.17% id in 214 aa; hypothetical protein 1966926..1967567 Burkholderia pseudomallei K96243 3094119 YP_108295.1 CDS BPSL1688 NC_006350.1 1967586 1968296 R Similar to Agrobacterium tumefaciens hypothetical protein atu2267 or agr_c_4120 SWALL:Q8UD60 (EMBL:AE009176) (214 aa) fasta scores: E(): 3.7e-15, 33.8% id in 213 aa, and to Brucella melitensis extracytoplasmic function alternative sigma factor bmeii0072 SWALL:Q8YDV2 (EMBL:AE009645) (413 aa) fasta scores: E(): 4.7e-14, 36.03% id in 247 aa; hypothetical protein complement(1967586..1968296) Burkholderia pseudomallei K96243 3094120 YP_108296.1 CDS BPSL1689 NC_006350.1 1968293 1968796 R Similar to Rhizobium meliloti hypothetical protein rb0506 or smb20527 SWALL:Q92W39 (EMBL:AL603643) (144 aa) fasta scores: E(): 8.5e-37, 69.63% id in 135 aa, and to Ralstonia solanacearum probable transmembrane protein rsp1037 or rs02374 SWALL:Q8XR31 (EMBL:AL646082) (162 aa) fasta scores: E(): 5.4e-06, 31.64% id in 158 aa; hypothetical protein complement(1968293..1968796) Burkholderia pseudomallei K96243 3094125 YP_108297.1 CDS BPSL1690 NC_006350.1 1968802 1969581 R Similar to Rhizobium meliloti hypothetical protein rb0507 or smb20528 SWALL:Q92W38 (EMBL:AL603643) (266 aa) fasta scores: E(): 1.2e-48, 54% id in 250 aa, and to Caulobacter crescentus hypothetical protein cc3256 SWALL:Q9A3E8 (EMBL:AE005989) (254 aa) fasta scores: E(): 4.5e-14, 30.69% id in 215 aa; hypothetical protein complement(1968802..1969581) Burkholderia pseudomallei K96243 3094126 YP_108298.1 CDS BPSL1691 NC_006350.1 1969571 1970482 R Similar to Rhizobium meliloti hypothetical protein rb0508 or smb20529 SWALL:Q92W37 (EMBL:AL603643) (309 aa) fasta scores: E(): 2.8e-72, 65.2% id in 273 aa, and to Caulobacter crescentus hypothetical protein cc3255 SWALL:Q9A3E9 (EMBL:AE005989) (280 aa) fasta scores: E(): 1.5e-46, 46.64% id in 268 aa; hypothetical protein complement(1969571..1970482) Burkholderia pseudomallei K96243 3091628 YP_108299.1 CDS BPSL1692 NC_006350.1 1970516 1970827 R Similar to Rhizobium meliloti hypothetical protein rb0509 or smb20530 SWALL:Q92W36 (EMBL:AL603643) (112 aa) fasta scores: E(): 1.2e-23, 66.33% id in 101 aa, and to Caulobacter crescentus hypothetical protein cc3254 SWALL:Q9A3F0 (EMBL:AE005989) (150 aa) fasta scores: E(): 2.4e-12, 52.94% id in 85 aa; hypothetical protein complement(1970516..1970827) Burkholderia pseudomallei K96243 3091629 YP_108300.1 CDS BPSL1695 NC_006350.1 1972586 1973254 R Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu3908 or agr_l_1876 SWALL:Q8U922 (EMBL:AE009321) (249 aa) fasta scores: E(): 1.6e-41, 51.62% id in 215 aa, and to Streptomyces coelicolor GntR-family transcriptional regulator sco1410 or sc6d7.29 SWALL:Q9RKW9 (EMBL:AL133213) (231 aa) fasta scores: E(): 2.1e-29, 47.29% id in 203 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; GntR family transcriptional regulator complement(1972586..1973254) Burkholderia pseudomallei K96243 3091681 YP_108301.1 CDS BPSL1696 NC_006350.1 1975293 1975937 D Similar to Xylella fastidiosa recombinase xfa0019 SWALL:Q9PHI6 (EMBL:AE003851) (188 aa) fasta scores: E(): 5.3e-29, 49.73% id in 189 aa, and to Bacteriophage Mu DNA-invertase Gin or 51 SWALL:DNIV_BPMU (SWALL:P03015) (193 aa) fasta scores: E(): 6.8e-28, 48.96% id in 194 aa; recombinase 1975293..1975937 Burkholderia pseudomallei K96243 3091682 YP_108302.1 CDS BPSL1699 NC_006350.1 1977067 1977360 R hypothetical protein complement(1977067..1977360) Burkholderia pseudomallei K96243 3094223 YP_108303.1 CDS BPSL1702 NC_006350.1 1978747 1979340 R Similar to Shigella boydii PinB gene product SWALL:Q57343 (EMBL:D00660) (195 aa) fasta scores: E(): 2.3e-29, 50.81% id in 185 aa, and to Salmonella typhi DNA-invertase sty3695 SWALL:Q8Z339 (EMBL:AL627279) (188 aa) fasta scores: E(): 2.5e-29, 52.24% id in 178 aa; invertase complement(1978747..1979340) Burkholderia pseudomallei K96243 3092124 YP_108304.1 CDS BPSL1704 NC_006350.1 1980105 1980470 R Similar to Escherichia coli transposase InsC for insertion element IS2 SWALL:INSC_ECOLI (SWALL:P19776) (121 aa) fasta scores: E(): 5.7e-20, 54.31% id in 116 aa, and to Ralstonia solanacearum ISRso10-transposase OrfA protein rsp0461 or rsc1434 or rs00949 or rs05904 SWALL:Q8XGI6 (EMBL:AL646078) (122 aa) fasta scores: E(): 2.5e-29, 69.67% id in 122 aa; transposase complement(1980105..1980470) Burkholderia pseudomallei K96243 3094836 YP_108305.1 CDS BPSL1704a NC_006350.1 1981770 1982252 D hypothetical protein 1981770..1982252 Burkholderia pseudomallei K96243 3094837 YP_108306.1 CDS BPSL1705 NC_006350.1 1982643 1987463 D Similar to Rhizobium loti hypothetical protein mll2848 SWALL:Q98HJ2 (EMBL:AP003000) (1953 aa) fasta scores: E(): 1.8e-60, 33.27% id in 1677 aa, and to Staphylococcus aureus hypothetical protein sav2654 or sa2447 SWALL:Q99QY4 (EMBL:AP003366) (2271 aa) fasta scores: E(): 3.4e-49, 29.2% id in 1589 aa. Note: High content in alanine, glycine, serine and threonine amino acid residues. Contains also three regions with repeats. Possible alternative translational start sites; hypothetical protein 1982643..1987463 Burkholderia pseudomallei K96243 3094881 YP_108307.1 CDS BPSL1706 NC_006350.1 1989162 1989479 D Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 6.8e-07, 32.25% id in 93 aa, and to Escherichia coli ORF1 SWALL:O52122 (EMBL:AF022236) (129 aa) fasta scores: E(): 7.7e-05, 30.7% id in 114 aa; HNS-like protein 1989162..1989479 Burkholderia pseudomallei K96243 3094882 YP_108308.1 CDS BPSL1707 NC_006350.1 1989929 1992244 D Similar to Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 2.4e-20, 29.25% id in 523 aa, and to Stigmatella aurantiaca copper-dependent oxidase Ox SWALL:Q938A2 (EMBL:AY055804) (779 aa) fasta scores: E(): 4.2e-08, 28.26% id in 750 aa; exported oxidase 1989929..1992244 Burkholderia pseudomallei K96243 3094450 YP_108309.1 CDS BPSL1708 NC_006350.1 1992311 1992739 D hypothetical protein 1992311..1992739 Burkholderia pseudomallei K96243 3094451 YP_108310.1 CDS BPSL1710 NC_006350.1 1994317 1996689 R Similar to Escherichia coli penicillin G acylase precursor Pac SWALL:PAC_ECOLI (SWALL:P06875) (846 aa) fasta scores: E(): 3.6e-08, 25.62% id in 636 aa, and to Pseudomonas sp. penicillin acylase II precursor AcyII SWALL:PAC2_PSES3 (SWALL:P15558) (773 aa) fasta scores: E(): 6.1e-35, 28.93% id in 788 aa; penicillin amidase complement(1994317..1996689) Burkholderia pseudomallei K96243 3091709 YP_108311.1 CDS BPSL1711 NC_006350.1 1996808 1998529 R Similar to Rhizobium sp. nodulation protein NolNO NolO or Y4hd SWALL:NOLO_RHISN (SWALL:P55474) (680 aa) fasta scores: E(): 6.7e-58, 39.07% id in 581 aa, and to Ralstonia solanacearum transferase rsp0788 or rs01919 SWALL:Q8XRP3 (EMBL:AL646080) (581 aa) fasta scores: E(): 1.2e-41, 30.76% id in 598 aa; carbamoyl transferase complement(1996808..1998529) Burkholderia pseudomallei K96243 3091710 YP_108312.1 CDS BPSL1712 NC_006350.1 1998620 2017444 R Similar to Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 1.5e-105, 31.93% id in 6198 aa, and to all the domains of Bacillus brevis tyrocidine synthetase III TycC SWALL:TYCC_BACBR (SWALL:O30409) blast scores: E(): 0.0, score: 4799 27% id. Note: Taking into consideration the blastp similarities and all the similarities to the domains in Bacillus brevis TycC, it could be proposed that BSPL1712 possibly incorporates six amino acids (Asn, Gln, Tyr, Val, Orn and Leu) into the peptide chain (as counts on five condensation domains) although it lacks the thioesterase domain at the C-terminal region; non-ribosomal antibiotic-related peptide synthase complement(1998620..2017444) Burkholderia pseudomallei K96243 3093426 YP_108313.1 CDS BPSL1713 NC_006350.1 2017441 2018013 R Similar to Anabaena sp. hypothetical protein alr7095 SWALL:Q8YL40 (EMBL:AP003600) (186 aa) fasta scores: E(): 3.3e-21, 38.2% id in 178 aa, and to Agrobacterium tumefaciens acetyltransferase atu4764 or agr_l_237 SWALL:Q8U6P3 (EMBL:AE009405) (186 aa) fasta scores: E(): 1.3e-19, 39.54% id in 177 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; acetyltransferase complement(2017441..2018013) Burkholderia pseudomallei K96243 3093427 YP_108314.1 CDS BPSL1714 NC_006350.1 2018070 2019230 R Similar to Aeromonas jandaei L-allo-threonine aldolase LtaA SWALL:LTAA_AERJA (SWALL:O07051) (338 aa) fasta scores: E(): 4.2e-54, 50.59% id in 334 aa, and to Escherichia coli low-specificity L-threonine aldolase LtaE or b0870 SWALL:LTAE_ECOLI (SWALL:P75823) (333 aa) fasta scores: E(): 6.7e-41, 40.58% id in 340 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; threonine aldolase complement(2018070..2019230) Burkholderia pseudomallei K96243 3092243 YP_108315.1 CDS BPSL1715 NC_006350.1 2019273 2021957 R Similar to full length of Rhizobium loti fusion protein contains ligase and probable arginosuccinate lyase msi203 SWALL:CAD31608 (EMBL:AL672113) (899 aa) fasta scores: E(): 5.4e-96, 38.52% id in 911 aa, and C-terminal region similar to Escherichia coli argininosuccinate lyase ArgH or b3960 SWALL:ARLY_ECOLI (SWALL:P11447) (457 aa) fasta scores: E(): 1.2e-25, 32.44% id in 376 aa; argininosuccinate lyase complement(2019273..2021957) Burkholderia pseudomallei K96243 3092244 YP_108316.1 CDS BPSL1716 NC_006350.1 2022010 2023125 R Similar to Rhizobium loti cysteine synthase mll9227 SWALL:Q981U9 (EMBL:AP003015) (351 aa) fasta scores: E(): 4.2e-53, 45.74% id in 341 aa, and to Alcaligenes eutrophus cysteine synthase CysM SWALL:CYSM_ALCEU (SWALL:Q44004) (339 aa) fasta scores: E(): 9.2e-16, 31.35% id in 303 aa; cysteine synthase complement(2022010..2023125) Burkholderia pseudomallei K96243 3091623 YP_108317.1 CDS BPSL1717 NC_006350.1 2023134 2023775 R hypothetical protein complement(2023134..2023775) Burkholderia pseudomallei K96243 3091624 YP_108318.1 CDS BPSL1718 NC_006350.1 2023772 2025004 R Similar to Streptomyces coelicolor transport protein sco1457 or scl6.14C SWALL:Q9L102 (EMBL:AL159139) (413 aa) fasta scores: E(): 7.1e-12, 26.75% id in 385 aa, and to Escherichia coli hypothetical protein YfcJ or b2322 SWALL:YFCJ_ECOLI (SWALL:P77549) (392 aa) fasta scores: E(): 1.7e-05, 23.7% id in 405 aa; hypothetical protein complement(2023772..2025004) Burkholderia pseudomallei K96243 3094603 YP_108319.1 CDS BPSL1719 NC_006350.1 2025058 2025975 R Similar to Rhizobium loti hypothetical protein mll9228 SWALL:Q981U8 (EMBL:AP003015) (329 aa) fasta scores: E(): 7.2e-31, 38.46% id in 299 aa, and to Bacillus thuringiensis possible kinase pbt101 SWALL:CAD30141 (EMBL:AL731825) (299 aa) fasta scores: E(): 1.4e-17, 30.03% id in 283 aa; kinase complement(2025058..2025975) Burkholderia pseudomallei K96243 3094604 YP_108320.1 CDS BPSL1720 NC_006350.1 2025972 2027372 R Similar to Escherichia coli argininosuccinate lyase ArgH or b3960 SWALL:ARLY_ECOLI (SWALL:P11447) (457 aa) fasta scores: E(): 7.9e-63, 43.26% id in 453 aa, and to Bacillus subtilis argininosuccinate lyase ArgH SWALL:ARLY_BACSU (SWALL:O34858) (461 aa) fasta scores: E(): 1.8e-70, 44.13% id in 460 aa; argininosuccinate lyase complement(2025972..2027372) Burkholderia pseudomallei K96243 3093740 YP_108321.1 CDS BPSL1721 NC_006350.1 2027369 2028583 R Similar to Streptomyces clavuligerus argininosuccinate synthase ArgG SWALL:ASSY_STRCL (SWALL:P50986) (397 aa) fasta scores: E(): 8.4e-49, 35.78% id in 394 aa, and to Thermoanaerobacter tengcongensis argininosuccinate synthase tte2494 SWALL:Q8R7C2 (EMBL:AE013190) (410 aa) fasta scores: E(): 1.9e-70, 44.92% id in 394 aa; argininosuccinate synthase complement(2027369..2028583) Burkholderia pseudomallei K96243 3093741 YP_108322.1 CDS BPSL1722 NC_006350.1 2028624 2029442 R Similar to Bordetella bronchiseptica formyl transferase bblps1.05 SWALL:O87978 (EMBL:AJ007747) (274 aa) fasta scores: E(): 2.8e-08, 24.21% id in 256 aa, and to Streptomyces coelicolor formyltransferase sco0499 or scf34.18 SWALL:Q9RK07 (EMBL:AL109974) (315 aa) fasta scores: E(): 1e-07, 26.14% id in 218 aa; formyl transferase complement(2028624..2029442) Burkholderia pseudomallei K96243 3094289 YP_108323.1 CDS BPSL1723 NC_006350.1 2029498 2030598 R hypothetical protein complement(2029498..2030598) Burkholderia pseudomallei K96243 3094290 YP_108324.1 CDS BPSL1724 NC_006350.1 2030608 2031618 R Similar to Anabaena sp. histidinol-phosphate aminotransferase 1 HisC1 or alr2092 SWALL:HI81_ANASP (SWALL:Q8YV89) (353 aa) fasta scores: E(): 3.1e-20, 31.17% id in 324 aa, and to Halobacterium volcanii histidinol-phosphate aminotransferase HisC SWALL:HIS8_HALVO (SWALL:P17736) (361 aa) fasta scores: E(): 7.6e-18, 30.74% id in 322 aa; histidinol-phosphate aminotransferase complement(2030608..2031618) Burkholderia pseudomallei K96243 3092858 YP_108325.1 CDS BPSL1725 NC_006350.1 2031680 2032564 R Full length similar to C-terminal region of Drosophila melanogaster CG13902 protein SWALL:Q9W0M3 (EMBL:AE003469) (394 aa) fasta scores: E(): 7.6e-16, 28.68% id in 244 aa, and C-terminal region similar to C-terminal region of Caulobacter crescentus PasS1-related protein cc1001 SWALL:Q9A9H9 (EMBL:AE005778) (344 aa) fasta scores: E(): 8.7e-08, 29.95% id in 207 aa. Note: Most of the database hits are to eukaryotic entries; hypothetical protein complement(2031680..2032564) Burkholderia pseudomallei K96243 3092859 YP_108326.1 CDS BPSL1726 NC_006350.1 2032551 2032775 R Similar to Pseudomonas aeruginosa hypothetical protein pa2412 SWALL:Q9I169 (EMBL:AE004668) (72 aa) fasta scores: E(): 1.5e-09, 43.07% id in 65 aa, and to Ralstonia solanacearum hypothetical protein rsp0640 or rs03727 SWALL:Q8XS41 (EMBL:AL646079) (68 aa) fasta scores: E(): 7.4e-08, 44.44% id in 54 aa; hypothetical protein complement(2032551..2032775) Burkholderia pseudomallei K96243 3094659 YP_108327.1 CDS BPSL1727 NC_006350.1 2033810 2035639 D Full length similar to the C-terminal regions of Amycolatopsis mediterranei peptide synthetase BpsC SWALL:Q939Y9 (EMBL:Y16952) (1858 aa) fasta scores: E(): 3.3e-07, 25.55% id in 626 aa, and of Streptomyces pristinaespiralis pristinamycin I synthase 3 and 4 SnbDE SWALL:O07944 (EMBL:Y11548) (4848 aa) fasta scores: E(): 3.7e-07, 26.49% id in 585 aa; non-ribosomal peptide synthase 2033810..2035639 Burkholderia pseudomallei K96243 3094660 YP_108328.1 CDS BPSL1728 NC_006350.1 2036054 2037277 R Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.1e-21, 30.44% id in 404 aa, and to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 2.1e-09, 28.32% id in 399 aa; exported porin complement(2036054..2037277) Burkholderia pseudomallei K96243 3092778 YP_108329.1 CDS BPSL1729 NC_006350.1 2037625 2038425 D Similar to Rhizobium meliloti transcription regulator protein r00348 or smc00429 SWALL:Q92SM3 (EMBL:AL591783) (269 aa) fasta scores: E(): 3.1e-35, 44.52% id in 265 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0686 or rs01763 SWALL:Q8XRZ5 (EMBL:AL646080) (274 aa) fasta scores: E(): 5.5e-35, 47.05% id in 255 aa; AraC family transcriptional regulator 2037625..2038425 Burkholderia pseudomallei K96243 3092779 YP_108330.1 CDS BPSL1730 NC_006350.1 2038590 2039528 D Similar to Rhizobium meliloti transmembrane protein r00347 or smc00428 SWALL:Q92SM4 (EMBL:AL591783) (298 aa) fasta scores: E(): 5.2e-43, 48.51% id in 303 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1953 or rs03527 SWALL:Q8XY10 (EMBL:AL646067) (336 aa) fasta scores: E(): 9e-20, 31.93% id in 310 aa; transmembrane protein 2038590..2039528 Burkholderia pseudomallei K96243 3093918 YP_108331.1 CDS cheW2 NC_006350.1 2039719 2040231 R Similar to Escherichia coli, and Escherichia coli O157:H7 chemotaxis protein CheW or b1887 or z2941 or ecs2597 SWALL:CHEW_ECOLI (SWALL:P07365) (167 aa) fasta scores: E(): 4.1e-30, 59.86% id in 147 aa, and to Burkholderia pseudomallei chemotaxis protein CheW SWALL:O05183 (EMBL:U92493) (175 aa) fasta scores: E(): 9.4e-32, 57.31% id in 164 aa. Note: Also similar to BPSL3305 cheW (176 aa) fasta scores: E(): 9.3e-31, 60.131% identity in 153 aa overlap; chemotaxis protein CheW complement(2039719..2040231) Burkholderia pseudomallei K96243 3092763 YP_108332.1 CDS BPSL1732 NC_006350.1 2040269 2042011 R Similar to Ralstonia solanacearum probable methyl-accepting chemotaxis I MCP-I serine chemoreceptor protein transmembrane CheD1 or rsp0507 or rs00386 SWALL:Q8XSG9 (EMBL:AL646079) (600 aa) fasta scores: E(): 3e-52, 43.88% id in 613 aa, and to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 9.1e-47, 40.85% id in 563 aa; methyl-accepting chemotaxis citrate transducer complement(2040269..2042011) Burkholderia pseudomallei K96243 3093919 YP_108333.1 CDS BPSL1733 NC_006350.1 2042724 2042912 R Similar to Ralstonia solanacearum hypothetical protein rsc3311 or rs02540 SWALL:Q8XU82 (EMBL:AL646074) (65 aa) fasta scores: E(): 0.015, 40.67% id in 59 aa; hypothetical protein complement(2042724..2042912) Burkholderia pseudomallei K96243 3091918 YP_108334.1 CDS BPSL1734 NC_006350.1 2043236 2045275 D activates fatty acids by binding to coenzyme A; AMP-binding protein 2043236..2045275 Burkholderia pseudomallei K96243 3091919 YP_108335.1 CDS BPSL1735 NC_006350.1 2045352 2046755 D Similar to Xanthomonas campestris drug resistance translocase YieO or xcc2362 SWALL:AAM41640 (EMBL:AE012345) (476 aa) fasta scores: E(): 3.5e-67, 44.58% id in 462 aa, and to Rhizobium loti multidrug efflux protein mll8348 SWALL:Q983F7 (EMBL:AP003013) (473 aa) fasta scores: E(): 1.5e-63, 42.29% id in 461 aa; transport system membrane protein 2045352..2046755 Burkholderia pseudomallei K96243 3093699 YP_108336.1 CDS BPSL1736 NC_006350.1 2047096 2047866 R Similar to Escherichia coli biotin synthesis protein BioC or b0777 SWALL:BIOC_ECOLI (SWALL:P12999) (251 aa) fasta scores: E(): 1.2e-05, 36.36% id in 110 aa, and to Brucella melitensis ubiquinone/menaquinone biosynthesis methyltransferase UbiE bmei1834 SWALL:Q8YEP4 (EMBL:AE009616) (262 aa) fasta scores: E(): 2e-40, 47.69% id in 239 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; methyltransferase complement(2047096..2047866) Burkholderia pseudomallei K96243 3093700 YP_108337.1 CDS BPSL1737 NC_006350.1 2048228 2049166 D Similar to Brucella melitensis glycine betaine-binding protein precursor bmei1725 SWALL:Q8YF02 (EMBL:AE009606) (304 aa) fasta scores: E(): 1.3e-70, 64.35% id in 303 aa, and to Agrobacterium tumefaciens ABC transporter substrate binding protein atu0199 or agr_c_337 SWALL:Q8UIU3 (EMBL:AE008993) (303 aa) fasta scores: E(): 3.7e-68, 63.48% id in 304 aa; ABC transporter exported protein 2048228..2049166 Burkholderia pseudomallei K96243 3093342 YP_108338.1 CDS BPSL1738 NC_006350.1 2049223 2050383 D Similar to Rhizobium loti ABC transporter permease mlr8414 SWALL:Q983A6 (EMBL:AP003014) (387 aa) fasta scores: E(): 1.5e-64, 52.63% id in 380 aa, and to Brucella melitensis glycine betaine/L-proline transport system permease bmei1726 SWALL:Q8YF01 (EMBL:AE009606) (386 aa) fasta scores: E(): 4.9e-58, 50.65% id in 381 aa; ABC transporter membrane protein 2049223..2050383 Burkholderia pseudomallei K96243 3093343 YP_108339.1 CDS BPSL1739 NC_006350.1 2050380 2051318 D Similar to Rhizobium meliloti choline uptake ABC transporter ATP-binding protein rb0812 or smb21146 SWALL:Q92V97 (EMBL:AL603645) (312 aa) fasta scores: E(): 2e-61, 61.93% id in 310 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YehX or b2129 SWALL:YEHX_ECOLI (SWALL:P33360) (308 aa) fasta scores: E(): 6.3e-44, 48.54% id in 309 aa; ABC transporter ATP-binding protein 2050380..2051318 Burkholderia pseudomallei K96243 3094442 YP_108340.1 CDS BPSL1740 NC_006350.1 2051315 2052133 D Similar to Rhizobium loti ABC transporter permease mlr8416 SWALL:Q983A4 (EMBL:AP003014) (249 aa) fasta scores: E(): 1.2e-46, 61.6% id in 237 aa, and to Yersinia pestis ABC transport integral membrane subunit ypo1199 SWALL:Q8ZGT0 (EMBL:AJ414147) (278 aa) fasta scores: E(): 5.9e-29, 49.32% id in 223 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; ABC transporter membrane protein 2051315..2052133 Burkholderia pseudomallei K96243 3094443 YP_108341.1 CDS BPSL1741 NC_006350.1 2053356 2053688 D No significant database matches. Very low and limited similarity to parts of Oryza sativa hypothetical 20.6 kDa protein osjnba0015i18.3 SWALL:Q8S7C0 (EMBL:AC090482) (191 aa) fasta scores: E(): 6.9, 51.72% id in 29 aa; hypothetical protein 2053356..2053688 Burkholderia pseudomallei K96243 3093374 YP_108342.1 CDS arcD NC_006350.1 2053849 2055309 D Similar to Pseudomonas aeruginosa arginine/ornithine antiporter ArcD or pa5170 SWALL:ARCD_PSEAE (SWALL:P18275) (482 aa) fasta scores: E(): 5.3e-140, 78.58% id in 481 aa, and to Clostridium perfringens arginine/ornithine antiporter cpe0170 SWALL:ARCD_CLOPE (SWALL:Q46170) (478 aa) fasta scores: E(): 2.4e-89, 51.8% id in 471 aa; arginine/ornithine antiporter 2053849..2055309 Burkholderia pseudomallei K96243 3092544 YP_108343.1 CDS arcA NC_006350.1 2055327 2056583 D catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 2055327..2056583 Burkholderia pseudomallei K96243 3092909 YP_108344.1 CDS arcB NC_006350.1 2056648 2057658 D catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 2056648..2057658 Burkholderia pseudomallei K96243 3092910 YP_108345.1 CDS arcC NC_006350.1 2057747 2058685 D reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 2057747..2058685 Burkholderia pseudomallei K96243 3091935 YP_108346.1 CDS BPSL1746 NC_006350.1 2058928 2059722 R Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1330 SWALL:Q9I414 (EMBL:AE004562) (259 aa) fasta scores: E(): 1.3e-57, 61.62% id in 258 aa, and to Methanosarcina acetivorans short chain dehydrogenase ma1321 SWALL:Q8TR63 (EMBL:AE010801) (269 aa) fasta scores: E(): 1.2e-41, 46.66% id in 255 aa; short chain dehydrogenase complement(2058928..2059722) Burkholderia pseudomallei K96243 3093375 YP_108347.1 CDS BPSL1747 NC_006350.1 2059719 2060168 R Similar to Pseudomonas aeruginosa hypothetical protein pa1329 SWALL:Q9I415 (EMBL:AE004562) (143 aa) fasta scores: E(): 5.2e-18, 53.73% id in 134 aa, and to Burkholderia sp. RP007 hypothetical 15.7 kDa protein PhnX SWALL:Q9RB84 (EMBL:AF112137) (149 aa) fasta scores: E(): 1.5e-09, 42.33% id in 137 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; hypothetical protein complement(2059719..2060168) Burkholderia pseudomallei K96243 3094233 YP_108348.1 CDS BPSL1748 NC_006350.1 2060266 2061186 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1328 SWALL:Q9I416 (EMBL:AE004562) (302 aa) fasta scores: E(): 3.2e-75, 67.79% id in 295 aa, and to Rhizobium meliloti transcription regulator protein r00290 or smc00370 SWALL:Q92SS5 (EMBL:AL591783) (296 aa) fasta scores: E(): 9.7e-34, 38.3% id in 295 aa; LysR family transcriptional regulator 2060266..2061186 Burkholderia pseudomallei K96243 3094234 YP_108349.1 CDS BPSL1749 NC_006350.1 2061471 2062175 D Similar to Rhizobium loti glutathione S-transferase mlr4954 SWALL:Q98CX9 (EMBL:AP003005) (234 aa) fasta scores: E(): 5.3e-65, 68.67% id in 233 aa, and to Burkholderia cepacia hypothetical 23.3 kDa protein SWALL:Q45073 (EMBL:U19883) (205 aa) fasta scores: E(): 5.4e-35, 50.95% id in 210 aa, and to Escherichia coli hypothetical GST-like protein YfcG or b2302 SWALL:YFCG_ECOLI (SWALL:P77526) (215 aa) fasta scores: E(): 3.3e-29, 45.71% id in 210 aa; glutathione S-transferase 2061471..2062175 Burkholderia pseudomallei K96243 3092879 YP_108350.1 CDS BPSL1750 NC_006350.1 2062731 2063270 D Similar to Xanthomonas campestris transcriptional regulator MarR/EmrR family xcc0435 SWALL:AAM39753 (EMBL:AE012141) (162 aa) fasta scores: E(): 2.2e-15, 33.33% id in 156 aa, and to Caulobacter crescentus transcriptional regulator, MarR family cc2188 SWALL:Q9A6A6 (EMBL:AE005891) (144 aa) fasta scores: E(): 3.8e-08, 33.57% id in 140 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; MarR family transcriptional regulator 2062731..2063270 Burkholderia pseudomallei K96243 3092880 YP_108351.1 CDS BPSL1751 NC_006350.1 2063491 2064606 D Similar to Ralstonia solanacearum amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.4e-50, 43.92% id in 362 aa, and to Rhizobium meliloti leucine-specific binding protein precursor LivK or r02480 or smc01946 SWALL:Q926C5 (EMBL:AL591790) (372 aa) fasta scores: E(): 1.2e-33, 34.07% id in 361 aa; amino-acid transport-related exported protein 2063491..2064606 Burkholderia pseudomallei K96243 3093906 YP_108352.1 CDS BPSL1752 NC_006350.1 2064914 2065408 R Similar to Erwinia chrysanthemi regulatory protein PecS SWALL:PECS_ERWCH (SWALL:P42195) (166 aa) fasta scores: E(): 6.9e-23, 45.86% id in 157 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2325 or rs01223 SWALL:Q8XWZ3 (EMBL:AL646069) (165 aa) fasta scores: E(): 4e-47, 80.36% id in 163 aa; MarR family transcriptional regulator complement(2064914..2065408) Burkholderia pseudomallei K96243 3093907 YP_108353.1 CDS BPSL1753 NC_006350.1 2065532 2066716 D Similar to Pseudomonas aeruginosa probable MFS transporter pa0273 SWALL:Q9I6L7 (EMBL:AE004465) (404 aa) fasta scores: E(): 5e-48, 46.15% id in 377 aa, and to Escherichia coli cyanate transport protein CynX or b0341 SWALL:CYNX_ECOLI (SWALL:P17583) (384 aa) fasta scores: E(): 6.8e-41, 38.66% id in 375 aa; transport-related membrane protein 2065532..2066716 Burkholderia pseudomallei K96243 3092318 YP_108354.1 CDS BPSL1754 NC_006350.1 2066841 2068412 D Similar to Bacillus subtilis YngK SWALL:Q9R9I7 (EMBL:AF184956) (510 aa) fasta scores: E(): 3.3e-96, 50.4% id in 494 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical lipoprotein YddW precursor or b1491 or z2217 or ecs2096 SWALL:YDDW_ECOLI (SWALL:P76130) (439 aa) fasta scores: E(): 5.7e-43, 37.64% id in 433 aa; lipoprotein 2066841..2068412 Burkholderia pseudomallei K96243 3092319 YP_108355.1 CDS cobM NC_006350.1 2068491 2069216 R Similar to Rhodococcus erythropolis precorrin-4 C11-methyltransferase CobM SWALL:COBM_RHOER (SWALL:Q53138) (249 aa) fasta scores: E(): 3.3e-43, 52.69% id in 241 aa, and to Pseudomonas denitrificans precorrin-4 C11-methyltransferase CobM SWALL:COBM_PSEDE (SWALL:P21922) (253 aa) fasta scores: E(): 1.1e-41, 52.43% id in 246 aa; precorrin-4 C11-methyltransferase complement(2068491..2069216) Burkholderia pseudomallei K96243 3094850 YP_108356.1 CDS cobK NC_006350.1 2069555 2070283 R CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase complement(2069555..2070283) Burkholderia pseudomallei K96243 3092655 YP_108357.1 CDS cbiD NC_006350.1 2070286 2071377 R Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase complement(2070286..2071377) Burkholderia pseudomallei K96243 3094469 YP_108358.1 CDS cobL NC_006350.1 2071377 2072603 R decarboxylating; Similar to Pseudomonas denitrificans precorrin-6Y C5,15-methyltransferase [decarboxylating] cobL SWALL:COBL_PSEDE (SWALL:P21921) (413 aa) fasta scores: E(): 7.9e-67, 49.62% id in 401 aa, and to Brucella melitensis precorrin-6Y C5,15-methyltransferase bmei0716 SWALL:Q8YHT0 (EMBL:AE009513) (401 aa) fasta scores: E(): 1.9e-90, 61.71% id in 397 aa; precorrin-6Y C5,15-methyltransferase complement(2071377..2072603) Burkholderia pseudomallei K96243 3092208 YP_108359.1 CDS BPSL1759 NC_006350.1 2073001 2074449 D Similar to Pseudomonas aeruginosa probable oxidoreductase pa2906 SWALL:Q9HZU1 (EMBL:AE004716) (486 aa) fasta scores: E(): 2.4e-32, 50.53% id in 465 aa, and to Physcomitrella patens ferredoxin-nitrite reductase Nii1 SWALL:BAB92078 (EMBL:AB074427) (602 aa) fasta scores: E(): 8.9e-13, 27.57% id in 417 aa. Note : This CDS has most of its database hits to eukaryotic entries; oxidoreductase 2073001..2074449 Burkholderia pseudomallei K96243 3094470 YP_108360.1 CDS cobH NC_006350.1 2074442 2075068 D catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 2074442..2075068 Burkholderia pseudomallei K96243 3093186 YP_108361.1 CDS cobI NC_006350.1 2075065 2075799 D catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C20-methyltransferase 2075065..2075799 Burkholderia pseudomallei K96243 3093187 YP_108362.1 CDS cobJ NC_006350.1 2075796 2077646 D Similar to Pseudomonas denitrificans precorrin-3b C17-methyltransferase CobJ SWALL:COBJ_PSEDE (SWALL:P21640) (254 aa) fasta scores: E(): 1.1e-35, 52.2% id in 249 aa, and to C-terminal region to Mycobacterium tuberculosis cobalamin biosynthesis protein rv2066 or mt2126 or mtcy49.05 SWALL:COBI_MYCTU (SWALL:Q10677) (508 aa) fasta scores: E(): 1.8e-31, 40% id in 365 aa; precorrin-3B C17-methyltransferase 2075796..2077646 Burkholderia pseudomallei K96243 3092654 YP_108363.1 CDS BPSL1763 NC_006350.1 2077979 2079352 D Similar to Aeromonas sp chitinase II precursor SWALL:Q59145 (EMBL:D31818) (542 aa) fasta scores: E(): 1.7e-30, 34.61% id in 468 aa, and to the C-terminal region of Escherichia coli probable bifunctional chitinase/lysozyme precursor ChiA or b3338 SWALL:CHIA_ECOLI (SWALL:P13656) (897 aa) fasta scores: E(): 9.3e-30, 40.25% id in 318 aa. Note: In the C-terminal region of the E. coli entry is where the chitinase activity resides; exported chitinase 2077979..2079352 Burkholderia pseudomallei K96243 3093420 YP_108364.1 CDS BPSL1764 NC_006350.1 2079715 2080041 D hypothetical protein 2079715..2080041 Burkholderia pseudomallei K96243 3093421 YP_108365.1 CDS BPSL1765 NC_006350.1 2080385 2081071 R Similar to Xanthomonas axonopodis carboxylesterase xac0619 SWALL:AAM35508 (EMBL:AE011690) (222 aa) fasta scores: E(): 6.3e-39, 50.69% id in 217 aa, and to Pseudomonas fluorescens carboxylesterase 2 EstB SWALL:EST2_PSEFL (SWALL:Q53547) (218 aa) fasta scores: E(): 1.2e-22, 38.53% id in 218 aa; carboxylesterase complement(2080385..2081071) Burkholderia pseudomallei K96243 3093424 YP_108366.1 CDS BPSL1766 NC_006350.1 2081458 2082072 R Similar to Pseudomonas aeruginosa hypothetical protein PA2941 SWALL:Q9HZQ6 (EMBL:AE004720) (214 aa) fasta scores: E(): 9.7e-15, 37.43% id in 187 aa; hypothetical protein complement(2081458..2082072) Burkholderia pseudomallei K96243 3093425 YP_108367.1 CDS BPSL1767 NC_006350.1 2082153 2083379 R C-terminal region is similar to Pseudomonas putida magnesium chelatase, subunit CHII PP3506 SWALL:Q88H59 (EMBL:AE016787) (337 aa) fasta scores: E(): 1.9e-40, 53.43% id in 335 aa. Full length CDS is similar to Chromobacterium violaceum probable chelatase CV1570 SWALL:Q7NXQ6 (EMBL:AE016915) (635 aa) fasta scores: E(): 2.8e-28, 44.29% id in 438 aa; magnesium chelatase complement(2082153..2083379) Burkholderia pseudomallei K96243 3091603 YP_108368.1 CDS cobN NC_006350.1 2084041 2087886 R with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN complement(2084041..2087886) Burkholderia pseudomallei K96243 3091604 YP_108369.1 CDS cobW NC_006350.1 2087953 2089026 R Similar to Pseudomonas denitrificans CobW protein SWALL:COBW_PSEDE (SWALL:P29937) (353 aa) fasta scores: E(): 2.1e-62, 50% id in 348 aa, and to Agrobacterium tumefaciens cobalamin synthesis related protein atu2805 or agr_c_5088 SWALL:Q8UBP6 (EMBL:AE009228) (345 aa) fasta scores: E(): 1.1e-58, 49.85% id in 335 aa; cobalamin biosynthesis-like protein complement(2087953..2089026) Burkholderia pseudomallei K96243 3093490 YP_108370.1 CDS hoxN NC_006350.1 2089148 2090209 R Similar to Alcaligenes eutrophus high-affinity nickel transport protein HoxN SWALL:HOXN_ALCEU (SWALL:P23516) (351 aa) fasta scores: E(): 4.3e-78, 58.11% id in 339 aa, and to Bradyrhizobium japonicum hydrogenase nickel incorporation protein HupN SWALL:HUPN_BRAJA (SWALL:Q45247) (381 aa) fasta scores: E(): 1e-61, 54.23% id in 319 aa; high-affinity nickel transport protein complement(2089148..2090209) Burkholderia pseudomallei K96243 3094455 YP_108371.1 CDS BPSL1771 NC_006350.1 2091314 2091766 D catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG 2091314..2091766 Burkholderia pseudomallei K96243 3093779 YP_108372.1 CDS cobO NC_006350.1 2091825 2092427 D catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 2091825..2092427 Burkholderia pseudomallei K96243 3094851 YP_108373.1 CDS cobB NC_006350.1 2092432 2094039 D Similar to Pseudomonas aeruginosa cobyrinic acid A,C-diamide synthase CobB or pa1273 SWALL:COBB_PSEAE (SWALL:Q9I471) (435 aa) fasta scores: E(): 2.8e-48, 49.81% id in 528 aa, and to Bacillus megaterium cobyrinic acid A,C-diamide synthase CobB or CbiA SWALL:COBB_BACME (SWALL:O87698) (460 aa) fasta scores: E(): 4.4e-16, 29.29% id in 536 aa. Note: This CDS contains an unique region from approximately residue 225 to approximately residue 340 that has no similarity to any of the database matches; cobyrinic acid A,C-diamide synthase 2092432..2094039 Burkholderia pseudomallei K96243 3094797 YP_108374.1 CDS BPSL1774 NC_006350.1 2094346 2095185 R Similar to Pseudomonas aeruginosa pyoverdine synthetase F PvdF SWALL:P72114 (EMBL:U07359) (275 aa) fasta scores: E(): 2.5e-78, 73.89% id in 272 aa, and to Burkholderia cepacia ornibactin synthetase F PvdF SWALL:Q9F479 (EMBL:AF013993) (279 aa) fasta scores: E(): 9.5e-68, 67.64% id in 272 aa; siderophore biosynthesis-like protein complement(2094346..2095185) Burkholderia pseudomallei K96243 3093780 YP_108375.1 CDS BPSL1775 NC_006350.1 2095250 2097514 R Similar to Burkholderia cepacia ornibactin receptor precursor OrbA SWALL:Q9F480 (EMBL:AF013993) (755 aa) fasta scores: E(): 5e-203, 68.7% id in 754 aa, and to Erwinia chrysanthemi ferrichrysobactin receptor precursor Ftc SWALL:FCT_ERWCH (SWALL:Q47162) (735 aa) fasta scores: E(): 4.2e-76, 34.5% id in 713 aa; iron uptake receptor complement(2095250..2097514) Burkholderia pseudomallei K96243 3094193 YP_108376.1 CDS BPSL1776 NC_006350.1 2097511 2098917 R Similar to Pseudomonas aeruginosa L-ornithine 5-monooxygenase PvdA or Pvd-1 or pa2386 SWALL:PVDA_PSEAE (SWALL:Q51548) (443 aa) fasta scores: E(): 2.3e-63, 48.01% id in 454 aa, and to the C-terminal region of Burkholderia cepacia L-ornithine 5-monooxygenase PvdA SWALL:PVDA_BURCE (SWALL:O51940) (444 aa) fasta scores: E(): 4.6e-124, 77.85% id in 411 aa; L-ornithine 5-monooxygenase complement(2097511..2098917) Burkholderia pseudomallei K96243 3094194 YP_108377.1 CDS BPSL1777 NC_006350.1 2099061 2104307 R Similar to Pseudomonas putida siderophore non-ribosomal peptide synthetase PpsD SWALL:Q9AKS6 (EMBL:AJ310530) (2246 aa) fasta scores: E(): 8.6e-57, 36.03% id in 1751 aa, and to Pseudomonas aeruginosa probable non-ribosomal peptide synthetase pa2402 SWALL:Q9I179 (EMBL:AE004667) (5149 aa) fasta scores: E(): 9e-57, 36.04% id in 1670 aa; siderophore-related non-ribosomal peptide synthase complement(2099061..2104307) Burkholderia pseudomallei K96243 3092437 YP_108378.1 CDS BPSL1778 NC_006350.1 2104329 2114201 R Similar to Xenorhabdus bovienii peptide synthetase XpsB SWALL:Q8VQF8 (EMBL:AF455810) (3316 aa) fasta scores: E(): 1.7e-106, 29.31% id in 3350 aa, and to Pseudomonas aeruginosa pyoverdine synthetase D PvdD or pa2399 SWALL:Q9I182 (EMBL:AE004666) (2448 aa) fasta scores: E(): 9.9e-93, 36.1% id in 1770 aa; siderophore related no-ribosomal peptide synthase complement(2104329..2114201) Burkholderia pseudomallei K96243 3092438 YP_108379.1 CDS BPSL1779 NC_006350.1 2114773 2116518 D Similar to Pseudomonas aeruginosa pyoverdine synthetase E PvdE SWALL:Q51340 (EMBL:U07359) (548 aa) fasta scores: E(): 1.4e-59, 37.7% id in 557 aa, and to Pseudomonas syringae ATP-binding protein SyrD SWALL:SYRD_PSESY (SWALL:P33951) (566 aa) fasta scores: E(): 7.7e-51, 36.92% id in 539 aa; siderophore biosynthesis related ABC transport protein 2114773..2116518 Burkholderia pseudomallei K96243 3091954 YP_108380.1 CDS BPSL1780 NC_006350.1 2117026 2117601 D Similar to Pseudomonas aeruginosa hypothetical protein pa0055 SWALL:Q9I777 (EMBL:AE004445) (168 aa) fasta scores: E(): 3.3e-05, 37.5% id in 168 aa; hypothetical protein 2117026..2117601 Burkholderia pseudomallei K96243 3091955 YP_108381.1 CDS BPSL1781 NC_006350.1 2117793 2118821 R Similar to Escherichia coli iron FecB or b4290 SWALL:FECB_ECOLI (SWALL:P15028) (300 aa) fasta scores: E(): 7.5e-10, 30.06% id in 306 aa, and to Anabaena sp. periplasmic iron-compound-binding protein of iron all0388 SWALL:Q8YZR9 (EMBL:AP003582) (300 aa) fasta scores: E(): 9.4e-20, 33.44% id in 296 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; iron transport-related exported protein complement(2117793..2118821) Burkholderia pseudomallei K96243 3091530 YP_108382.1 CDS BPSL1782 NC_006350.1 2118986 2119792 R Similar to Escherichia coli ferric iron reductase FhuF or b4367 SWALL:FHUF_ECOLI (SWALL:P39405) (262 aa) fasta scores: E(): 4.7e-06, 27.27% id in 242 aa, and to Rhizobium meliloti transport protein r02270 or smc01658 SWALL:Q92ND8 (EMBL:AL591790) (243 aa) fasta scores: E(): 1.2e-06, 27.31% id in 238 aa; iron transport-related membrane protein complement(2118986..2119792) Burkholderia pseudomallei K96243 3091531 YP_108383.1 CDS BPSL1783 NC_006350.1 2119789 2121909 R part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit complement(2119789..2121909) Burkholderia pseudomallei K96243 3093956 YP_108384.1 CDS BPSL1784 NC_006350.1 2121906 2122796 R Similar to Escherichia coli ferric enterobactin transport ATP-binding protein FepC or b0588 SWALL:FEPC_ECOLI (SWALL:P23878) (271 aa) fasta scores: E(): 1.7e-33, 44.57% id in 258 aa, and to Synechocystis sp. iron slr1318 SWALL:P72592 (EMBL:D90899) (268 aa) fasta scores: E(): 8.8e-38, 48.65% id in 261 aa; iron transport-related ATP-binding protein complement(2121906..2122796) Burkholderia pseudomallei K96243 3093957 YP_108385.1 CDS BPSL1785 NC_006350.1 2122834 2123850 R Similar to Pseudomonas aeruginosa hypothetical protein pa2304 SWALL:Q9I1H1 (EMBL:AE004656) (362 aa) fasta scores: E(): 3.8e-48, 46.47% id in 312 aa, and to Streptomyces verticillus SyrP-like protein SWALL:Q9FB16 (EMBL:AF210249) (339 aa) fasta scores: E(): 4e-43, 44.05% id in 311 aa; hypothetical protein complement(2122834..2123850) Burkholderia pseudomallei K96243 3091936 YP_108386.1 CDS BPSL1786 NC_006350.1 2123909 2124151 R Similar to Pseudomonas aeruginosa hypothetical protein pa2412 SWALL:Q9I169 (EMBL:AE004668) (72 aa) fasta scores: E(): 1.5e-15, 63.07% id in 65 aa, and to Mycobacterium tuberculosis MbtH protein or rv2377c or mt2445.1 or mtcy27.03 SWALL:MBTH_MYCTU (SWALL:O05821) (71 aa) fasta scores: E(): 2.8e-10, 46.87% id in 64 aa; hypothetical protein complement(2123909..2124151) Burkholderia pseudomallei K96243 3091937 YP_108387.1 CDS BPSL1787 NC_006350.1 2124207 2124830 R RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease; extracytoplasmic-function sigma-70 factor complement(2124207..2124830) Burkholderia pseudomallei K96243 3093703 YP_108388.1 CDS BPSL1789 NC_006350.1 2125986 2126732 R Similar to Gallus gallus D-erythrulose reductase Der SWALL:BAB97210 (EMBL:AB049356) (246 aa) fasta scores: E(): 4e-35, 48.78% id in 246 aa, and to Rhizobium meliloti oxidoreductase r02525 or smc01991 SWALL:Q92MT5 (EMBL:AL591791) (241 aa) fasta scores: E(): 1.1e-34, 46.91% id in 243 aa. Note: The majoroty of the databse matches belong to eukayotic organisms; short chain dehydrogenase complement(2125986..2126732) Burkholderia pseudomallei K96243 3092666 YP_108389.1 CDS BPSL1790 NC_006350.1 2128282 2129373 R Similar to Yersinia pestis zinc-binding dehydrogenase ypo3352 SWALL:Q8ZBQ5 (EMBL:AJ414156) (371 aa) fasta scores: E(): 2.3e-66, 49.43% id in 356 aa, and to Bacillus halodurans sorbitol dehydrogenase bh0189 SWALL:DHSO_BACHD (SWALL:Q9Z9U1) (343 aa) fasta scores: E(): 1.7e-28, 34.35% id in 358 aa; zinc-binding dehydrogenase complement(2128282..2129373) Burkholderia pseudomallei K96243 3092667 YP_108390.1 CDS BPSL1791 NC_006350.1 2129576 2130595 R Similar to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4322 or agr_l_1078 SWALL:Q8U7X7 (EMBL:AE009360) (327 aa) fasta scores: E(): 1.3e-63, 64.72% id in 309 aa, and to Escherichia coli, and Escherichia coli O157:H7 ribose transport system permease RbsC or b3750 or z5251 or ecs4692 SWALL:RBSC_ECO57 (SWALL:P04984) (321 aa) fasta scores: E(): 3.4e-43, 47.41% id in 310 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein complement(2129576..2130595) Burkholderia pseudomallei K96243 3093021 YP_108391.1 CDS BPSL1792 NC_006350.1 2130598 >2132127 R Low similarity to parts of Microbacterium ammoniaphilum hypothetical 58.7 kDa protein SWALL:P94909 (EMBL:X79027) (529 aa) fasta scores: E(): 5.6e-09, 33.58% id in 396 aa, and to Homo sapiens hypothetical protein dkfzp434d1812 SWALL:Q9H0L6 (EMBL:AL136745) (1170 aa) fasta scores: E(): 7.4e-07, 25.18% id in 552 aa. Note: Most of the database matches belong to eukaryotic entries; hypothetical protein complement(2130598..>2132127) Burkholderia pseudomallei K96243 3093022 YP_108392.1 CDS BPSL1793 NC_006350.1 2132189 2133133 R Similar to Agrobacterium tumefaciens ABC transporter substrate binding protein atu4320 or agr_l_1084 SWALL:Q8U7X9 (EMBL:AE009360) (303 aa) fasta scores: E(): 1e-69, 67.79% id in 295 aa, and to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB or b3751 SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 1.1e-20, 32.33% id in 300 aa; sugar-binding exported protein complement(2132189..2133133) Burkholderia pseudomallei K96243 3092676 YP_108393.1 CDS BPSL1794 NC_006350.1 2133238 2134254 R Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4319 or agr_l_1086 SWALL:Q8U7Y0 (EMBL:AE009360) (305 aa) fasta scores: E(): 1e-58, 48.96% id in 290 aa, and to Pseudomonas aeruginosa transcriptional regulator MtlR or pa2337 SWALL:Q9I1E1 (EMBL:AE004660) (301 aa) fasta scores: E(): 1.5e-39, 37.5% id in 280 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; AraC family transcriptional regulator complement(2133238..2134254) Burkholderia pseudomallei K96243 3092677 YP_108394.1 CDS BPSL1795 NC_006350.1 2135014 2135730 D hypothetical protein 2135014..2135730 Burkholderia pseudomallei K96243 3094821 YP_108395.1 CDS BPSL1796 NC_006350.1 2135807 2137408 D Low similarity to Caulobacter crescentus hypothetical protein cc2711 SWALL:Q9A4W4 (EMBL:AE005937) (585 aa) fasta scores: E(): 4.1e-10, 25.84% id in 530 aa; hypothetical protein 2135807..2137408 Burkholderia pseudomallei K96243 3094822 YP_108396.1 CDS BPSL1797 NC_006350.1 2137542 2139305 D Similar to Caulobacter crescentus ABC transporter HlyB/MsbA family cc1314 SWALL:Q9A8N9 (EMBL:AE005806) (643 aa) fasta scores: E(): 2.1e-27, 27.76% id in 587 aa, and to Yersinia pestis ABC transport protein ypo2588 SWALL:Q8ZDI0 (EMBL:AJ414152) (631 aa) fasta scores: E(): 8.3e-26, 26.18% id in 569 aa; ABC transporter membrane protein 2137542..2139305 Burkholderia pseudomallei K96243 3094557 YP_108397.1 CDS BPSL1798 NC_006350.1 2139356 2140381 R Similar to Pseudomonas aeruginosa hypothetical protein pa0498 SWALL:Q9I620 (EMBL:AE004487) (335 aa) fasta scores: E(): 1.1e-13, 23.79% id in 332 aa, and to Yersinia pestis exported protein ypo4040 SWALL:Q8Z9Y9 (EMBL:AJ414160) (328 aa) fasta scores: E(): 2.2e-10, 28.4% id in 345 aa; hypothetical protein complement(2139356..2140381) Burkholderia pseudomallei K96243 3094558 YP_108398.1 CDS BPSL1799 NC_006350.1 2140378 2141127 R Similar to Escherichia coli O157:H7 fimbrial chaperone YfcS or z3599 or ecs3220 SWALL:Q8XCP6 (EMBL:AE005465) (252 aa) fasta scores: E(): 1.2e-32, 39.59% id in 245 aa, and to Proteus mirabilis chaperone protein PmfD precursor WALL:PMFD_PROMI (SWALL:P53520) (254 aa) fasta scores: E(): 4.4e-29, 36.63% id in 232 aa; fimbrial chaperone complement(2140378..2141127) Burkholderia pseudomallei K96243 3091466 YP_108399.1 CDS BPSL1800 NC_006350.1 2141243 2143711 R Similar to Escherichia coli outer membrane usher protein PapC precursor SWALL:PAPC_ECOLI (SWALL:P07110) (836 aa) fasta scores: E(): 1e-85, 38.1% id in 824 aa, and to Proteus mirabilis outer membrane usher protein PmfC precursor SWALL:PMFC_PROMI (SWALL:P53514) (828 aa) fasta scores: E(): 1.1e-66, 33.66% id in 799 aa; outer membrane usher protein complement(2141243..2143711) Burkholderia pseudomallei K96243 3091467 YP_108400.1 CDS BPSL1801 NC_006350.1 2143834 2144346 R Similar to Escherichia coli type-1 fimbrial protein, A chain precursor FimA or PilA or b4314 SWALL:FM1A_ECOLI (SWALL:P04128) (182 aa) fasta scores: E(): 3.2e-17, 42.62% id in 183 aa, and to Klebsiella pneumoniae fimbrial subunit type 1 precursor SWALL:FM11_KLEPN (SWALL:P12266) (182 aa) fasta scores: E(): 3.2e-17, 42.62% id in 183 aa; type-1 fimbrial protein complement(2143834..2144346) Burkholderia pseudomallei K96243 3091571 YP_108401.1 CDS BPSL1802 NC_006350.1 2146271 2147821 R Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 2.3e-59, 46.39% id in 485 aa, and to Xanthomonas axonopodis outer membrane protein OprM or xac2842 SWALL:AAM37687 (EMBL:AE011925) (503 aa) fasta scores: E(): 9.5e-65, 47.54% id in 488 aa; multidrug efflux system membrane lipoprotein complement(2146271..2147821) Burkholderia pseudomallei K96243 3091572 YP_108402.1 CDS amrB NC_006350.1 2147818 2150949 R MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein complement(2147818..2150949) Burkholderia pseudomallei K96243 3094491 YP_108403.1 CDS amrA NC_006350.1 2150966 2152165 R MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein complement(2150966..2152165) Burkholderia pseudomallei K96243 3092155 YP_108404.1 CDS amrR NC_006350.1 2152309 2152980 D Almost identical to Burkholderia pseudomallei regulator AmrR SWALL:O87934 (EMBL:AF072887) (187 aa) fasta scores: E(): 1e-64, 99.42% id in 173 aa. Similar to Ralstonia solanacearum AcrAB operon repressor transcription regulator protein AcrR or rsc0012 or rs01834 SWALL:Q8Y3G8 (EMBL:AL646057) (219 aa) fasta scores: E(): 4.2e-21, 38.22% id in 225 aa. Note: This CDS is longer than the previously sequenced AmrR in its C-terminal region, it is possible that the previous sequence submitted to the databases had a sequencing error that led to a frameshift after residue 173; TetR family regulatory protein 2152309..2152980 Burkholderia pseudomallei K96243 3094492 YP_108405.1 CDS BPSL1806 NC_006350.1 2153499 2154740 D C-terminal region similar to C-terminal region of Brucella melitensis lysostaphin bmei1268 SWALL:Q8YG93 (EMBL:AE009565) (472 aa) fasta scores: E(): 3e-18, 35.1% id in 245 aa, and to Rickettsia prowazekii hypothetical protein rp407 SWALL:Q9ZDC5 (EMBL:AJ235271) (458 aa) fasta scores: E(): 3.4e-18, 29.6% id in 277 aa; peptidase 2153499..2154740 Burkholderia pseudomallei K96243 3091805 YP_108406.1 CDS BPSL1807 NC_006350.1 2154782 2155525 R Similar to Pseudomonas aeruginosa probable amino acid permease pa2202 SWALL:Q9I1R5 (EMBL:AE004646) (225 aa) fasta scores: E(): 1.7e-53, 67.11% id in 225 aa, and to Ralstonia solanacearum probable amino acid transmembrane ABC transporter protein rsp0933 or rs05400 SWALL:Q8XRC5 (EMBL:AL646081) (248 aa) fasta scores: E(): 2.2e-28, 41.52% id in 236 aa; amino acid transport system, membrane protein complement(2154782..2155525) Burkholderia pseudomallei K96243 3091806 YP_108407.1 CDS BPSL1808 NC_006350.1 2155528 2156253 R Similar to Yersinia pestis ABC transporter permease ypo4110 SWALL:Q8Z9T5 (EMBL:AJ414160) (245 aa) fasta scores: E(): 5.8e-51, 59.3% id in 231 aa, and to Pseudomonas aeruginosa probable amino acid permease pa2203 SWALL:Q9I1R4 (EMBL:AE004646) (238 aa) fasta scores: E(): 3.3e-48, 62.23% id in 233 aa; amino acid transport system, membrane protein complement(2155528..2156253) Burkholderia pseudomallei K96243 3091735 YP_108408.1 CDS BPSL1809 NC_006350.1 2156652 2157467 R Similar to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa2204 SWALL:Q9I1R3 (EMBL:AE004647) (268 aa) fasta scores: E(): 1.2e-70, 68.88% id in 270 aa, and to Escherichia coli cystine-binding periplasmic protein precursor FliY or b1920 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 2e-20, 32.8% id in 253 aa; amino acid transport system, exported protein complement(2156652..2157467) Burkholderia pseudomallei K96243 3091736 YP_108409.1 CDS BPSL1810 NC_006350.1 2157757 2158737 R Similar to Ralstonia solanacearum transmembrane protein rsc0648 or rs01552 SWALL:Q8Y1P2 (EMBL:AL646060) (347 aa) fasta scores: E(): 1.6e-41, 41.64% id in 329 aa; hypothetical protein complement(2157757..2158737) Burkholderia pseudomallei K96243 3093233 YP_108410.1 CDS BPSL1811 NC_006350.1 2158781 2159209 R Similar to Ralstonia solanacearum transmembrane protein rsc0649 or rs01553 SWALL:Q8Y1P1 (EMBL:AL646060) (144 aa) fasta scores: E(): 3.7e-14, 40.58% id in 138 aa; hypothetical protein complement(2158781..2159209) Burkholderia pseudomallei K96243 3093234 YP_108411.1 CDS BPSL1812 NC_006350.1 2159206 2160219 R Similar to the central parts of Agrobacterium tumefaciens hypothetical protein atu0215 or agr_c_369 SWALL:Q8UIS7 (EMBL:AE008995) (289 aa) fasta scores: E(): 5.6e-08, 28.62% id in 255 aa, and of Rhizobium loti hypothetical protein mll5605 SWALL:Q98BF1 (EMBL:AP003007) (275 aa) fasta scores: E(): 7e-07, 25.76% id in 260 aa; hypothetical protein complement(2159206..2160219) Burkholderia pseudomallei K96243 3093658 YP_108412.1 CDS BPSL1813 NC_006350.1 2160315 2161259 R Similar to Ralstonia solanacearum tight adherence TadC-related transmembrane protein rsc0650 or rs01554 SWALL:Q8Y1P0 (EMBL:AL646060) (315 aa) fasta scores: E(): 1.8e-20, 32.23% id in 304 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpI or atu0216 or agr_c_371 SWALL:Q8UIS6 (EMBL:AE008995) (328 aa) fasta scores: E(): 4.1e-19, 30.4% id in 319 aa; fimbriae-related membrane protein complement(2160315..2161259) Burkholderia pseudomallei K96243 3093659 YP_108413.1 CDS BPSL1814 NC_006350.1 2161256 2162251 R Similar to Rhizobium loti hypothetical protein mlr5603 SWALL:Q98BF3 (EMBL:AP003007) (337 aa) fasta scores: E(): 4e-21, 32.46% id in 308 aa, and C-terminal region similar to C-terminal region of Agrobacterium tumefaciens components of type IV pilus CtpH or atu0217 or agr_c_372 SWALL:Q8UIS5 (EMBL:AE008995) (334 aa) fasta scores: E(): 8.8e-20, 32.46% id in 231 aa; hypothetical protein complement(2161256..2162251) Burkholderia pseudomallei K96243 3091544 YP_108414.1 CDS BPSL1815 NC_006350.1 2162248 2163822 R Similar to Caulobacter crescentus pilus assembly protein CpaF cc2942 SWALL:Q9A496 (EMBL:AE005958) (501 aa) fasta scores: E(): 6.6e-65, 47.03% id in 523 aa, and to Agrobacterium tumefaciens component of type IV pilus CtpG or atu0218 or agr_c_373 SWALL:Q8UIS4 (EMBL:AE008995) (491 aa) fasta scores: E(): 3.4e-60, 45.69% id in 464 aa; fimbriae assembly-like protein complement(2162248..2163822) Burkholderia pseudomallei K96243 3091545 YP_108415.1 CDS BPSL1816 NC_006350.1 2163819 2165054 R Similar to Caulobacter crescentus pilus assembly protein CpaE cc2943 SWALL:Q9A495 (EMBL:AE005958) (517 aa) fasta scores: E(): 1.4e-25, 31.34% id in 386 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpF or atu0219 or agr_c_376 SWALL:Q8UIS3 (EMBL:AE008995) (462 aa) fasta scores: E(): 9.4e-20, 28.64% id in 412 aa; fimbriae assembly-like protein complement(2163819..2165054) Burkholderia pseudomallei K96243 3093313 YP_108416.1 CDS BPSL1817 NC_006350.1 2165065 2165478 R Very low similarity to C-terminal region of Agrobacterium tumefaciens components of type IV pilus CtpE or atu0220 or agr_c_378 SWALL:Q8UIS2 (EMBL:AE008995) (250 aa) fasta scores: E(): 0.47, 45.09% id in 51 aa; lipoprotein complement(2165065..2165478) Burkholderia pseudomallei K96243 3093314 YP_108417.1 CDS BPSL1818 NC_006350.1 2165512 2166831 R Similar to Rhizobium sp. hypothetical 44.3 kDa protein Y4xJ WALL:Y4XJ_RHISN (SWALL:P55702) (423 aa) fasta scores: E(): 4e-52, 39.54% id in 440 aa, and to Escherichia coli protein transport protein precursor HofQ or HopQ or b3391 SWALL:HOFQ_ECOLI (SWALL:P34749) (412 aa) fasta scores: E(): 1.1e-14, 28.42% id in 380 aa; fimbriae assembly-like protein complement(2165512..2166831) Burkholderia pseudomallei K96243 3092532 YP_108418.1 CDS BPSL1819 NC_006350.1 2166995 2168047 R Similar to Caulobacter crescentus hypothetical 29.8 kDa protein cc2946 SWALL:Q9L718 (EMBL:AF229646) (297 aa) fasta scores: E(): 3.8e-11, 31.46% id in 267 aa, and to Rhizobium loti pilus assembly protein, CpaB mlr5595 SWALL:Q98BF8 (EMBL:AP003007) (271 aa) fasta scores: E(): 9.7e-08, 30.04% id in 253 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; fimbriae-assembly-like protein complement(2166995..2168047) Burkholderia pseudomallei K96243 3092533 YP_108419.1 CDS BPSL1820 NC_006350.1 2168060 2168578 R Similar to Caulobacter crescentus PilD or cc2947 SWALL:Q9L719 (EMBL:AF229646) (170 aa) fasta scores: E(): 3.4e-05, 36.41% id in 173 aa, and to Rhizobium meliloti probable pilus assembly protein CpaA2 or ra0857 or sma1578 SWALL:Q92YL6 (EMBL:AE007272) (170 aa) fasta scores: E(): 0.038, 30.28% id in 142 aa; fimbriae assembly-like protein complement(2168060..2168578) Burkholderia pseudomallei K96243 3091425 YP_108420.1 CDS BPSL1821 NC_006350.1 2168604 2168795 R Similar to Ralstonia solanacearum pilin protein rsp1092 or rs02598 SWALL:Q8XQX6 (EMBL:AL646082) (58 aa) fasta scores: E(): 0.46, 32.72% id in 55 aa, and to Actinobacillus actinomycetemcomitans Flp-1 protein SWALL:Q8RMW9 (EMBL:AF487931) (75 aa) fasta scores: E(): 0.94, 33.33% id in 57 aa; fimbriae assembly-like protein complement(2168604..2168795) Burkholderia pseudomallei K96243 3091426 YP_108421.1 CDS BPSL1822 NC_006350.1 2169348 2170319 R Similar to Xanthomonas axonopodis permease NrtB or xac0827 SWALL:AAM35715 (EMBL:AE011714) (294 aa) fasta scores: E(): 3.2e-63, 63.43% id in 320 aa, and almost full length to Escherichia coli aliphatic sulfonates transport permease SsuC or b0934 SWALL:SSUC_ECOLI (SWALL:P75851) (263 aa) fasta scores: E(): 7.2e-17, 30.15% id in 252 aa; hypothetical protein complement(2169348..2170319) Burkholderia pseudomallei K96243 3094726 YP_108422.1 CDS BPSL1823 NC_006350.1 2170316 2171155 R Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa2308 SWALL:Q9I1G7 (EMBL:AE004657) (282 aa) fasta scores: E(): 9.4e-60, 68.47% id in 276 aa, and to Synechococcus sp. nitrate transport ATP-binding protein NrtD SWALL:NRTD_SYNP7 (SWALL:P38046) (274 aa) fasta scores: E(): 1.2e-27, 43.29% id in 231 aa; ABC transporter ATP-binding protein complement(2170316..2171155) Burkholderia pseudomallei K96243 3094727 YP_108423.1 CDS BPSL1824 NC_006350.1 2171706 2172752 R Similar to Pseudomonas aeruginosa hypothetical protein pa2309 SWALL:Q9I1G6 (EMBL:AE004657) (340 aa) fasta scores: E(): 5.5e-85, 66.37% id in 339 aa, and to Xanthomonas campestris ABC transporter substrate binding protein xcc0774 SWALL:AAM40089 (EMBL:AE012177) (347 aa) fasta scores: E(): 5.6e-85, 68.51% id in 324 aa; ABC transporter substrate-binding protein complement(2171706..2172752) Burkholderia pseudomallei K96243 3092080 YP_108424.1 CDS BPSL1825 NC_006350.1 2173005 2174309 R Similar to Ralstonia solanacearum alpha-ketoglutarate permease transmembrane protein rsp0075 or rs05546 SWALL:Q8XTN1 (EMBL:AL646076) (437 aa) fasta scores: E(): 2.2e-144, 84.68% id in 431 aa, and to Escherichia coli alpha-ketoglutarate permease KgtP or WitA or b2587 SWALL:KGTP_ECOLI (SWALL:P17448) (432 aa) fasta scores: E(): 4.9e-116, 71.49% id in 414 aa; ABC transporter permease complement(2173005..2174309) Burkholderia pseudomallei K96243 3092081 YP_108425.1 CDS BPSL1826 NC_006350.1 2174784 2176310 R Similar to Pseudomonas aeruginosa hypothetical protein pa0586 SWALL:Q9I5V1 (EMBL:AE004494) (517 aa) fasta scores: E(): 1.3e-141, 67.69% id in 486 aa, and to Escherichia coli hypothetical protein YcgB or b1188 SWALL:YCGB_ECOLI (SWALL:P29013) (510 aa) fasta scores: E(): 8.4e-137, 64.12% id in 499 aa; SpoVR family protein complement(2174784..2176310) Burkholderia pseudomallei K96243 3094431 YP_108426.1 CDS BPSL1827 NC_006350.1 2176466 2177731 R Similar to Pseudomonas aeruginosa hypothetical protein pa0587 SWALL:Q9I5V0 (EMBL:AE004494) (423 aa) fasta scores: E(): 1.6e-89, 55.1% id in 421 aa, and to Escherichia coli hypothetical protein YeaH or b1784 SWALL:YEAH_ECOLI (SWALL:P76235) (427 aa) fasta scores: E(): 2.6e-86, 53.81% id in 420 aa; hypothetical protein complement(2176466..2177731) Burkholderia pseudomallei K96243 3094432 YP_108427.1 CDS BPSL1828 NC_006350.1 2177855 2179777 R Similar to Pseudomonas aeruginosa hypothetical protein pa0588 SWALL:Q9I5U9 (EMBL:AE004495) (640 aa) fasta scores: E(): 1.2e-195, 79.03% id in 639 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YeaG or b1783 or z2823 or ecs2492 SWALL:YEAG_ECOLI (SWALL:P77391) (644 aa) fasta scores: E(): 3.9e-189, 75.15% id in 644 aa; hypothetical protein complement(2177855..2179777) Burkholderia pseudomallei K96243 3092354 YP_108428.1 CDS BPSL1829 NC_006350.1 2180671 2182575 R Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 1.5e-48, 44.32% id in 546 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis I Mcp-I serine chemoreceptor protein transmembrane CheD1 or rsp0507 or rs00386 SWALL:Q8XSG9 (EMBL:AL646079) (600 aa) fasta scores: E(): 4e-66, 50.95% id in 628 aa. Note: Possible alternative start codon at residue 9; methyl-accepting chemotaxis protein complement(2180671..2182575) Burkholderia pseudomallei K96243 3092355 YP_108429.1 CDS BPSL1830 NC_006350.1 2182764 2183738 R Similar to Escherichia coli, and Escherichia coli O157:H7 ribokinase RbsK or b3752 or z5253 or ecs4694 SWALL:RBSK_ECOLI (SWALL:P05054) (309 aa) fasta scores: E(): 1.2e-33, 44.4% id in 304 aa, and to Pseudomonas aeruginosa ribokinase RbsK or pa1950 SWALL:Q9I2F4 (EMBL:AE004621) (308 aa) fasta scores: E(): 2.9e-50, 58.49% id in 306 aa; ribokinase complement(2182764..2183738) Burkholderia pseudomallei K96243 3094138 YP_108430.1 CDS BPSL1831 NC_006350.1 2183735 2184766 R Similar to Escherichia coli, and Escherichia coli O157:H7 ribose operon repressor RbsR or b3753 or z5254 or ecs4695 SWALL:RBSR_ECOLI (SWALL:P25551) (329 aa) fasta scores: E(): 5.6e-41, 40.3% id in 330 aa, and to Pseudomonas aeruginosa ribose operon repressor pa1949 SWALL:Q9I2F5 (EMBL:AE004621) (337 aa) fasta scores: E(): 3e-80, 67.16% id in 332 aa; ribose operon repressor complement(2183735..2184766) Burkholderia pseudomallei K96243 3094139 YP_108431.1 CDS BPSL1832 NC_006350.1 2184796 2185809 R Similar to Escherichia coli, and Escherichia coli O157:H7 ribose transport system permease RbsC or b3750 or z5251 or ecs4692 SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 5.3e-31, 39.33% id in 300 aa, and to Pseudomonas aeruginosa membrane protein component of ABC ribose transporter pa1948 SWALL:Q9I2F6 (EMBL:AE004621) (332 aa) fasta scores: E(): 1e-84, 78.59% id in 327 aa; ribose transport system, permease complement(2184796..2185809) Burkholderia pseudomallei K96243 3094134 YP_108432.1 CDS BPSL1833 NC_006350.1 2185880 2187451 R Similar to Escherichia coli ribose transport ATP-binding protein RbsA or b3749 SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 1.9e-55, 41.24% id in 497 aa, and to Pseudomonas aeruginosa ribose transport protein pa1947 SWALL:Q9I2F7 (EMBL:AE004621) (510 aa) fasta scores: E(): 9.6e-112, 70.35% id in 506 aa; ribose transport system, ATP-binding protein complement(2185880..2187451) Burkholderia pseudomallei K96243 3094135 YP_108433.1 CDS BPSL1834 NC_006350.1 2187591 2188553 R Similar to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB or b3751 SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 9.3e-15, 31.49% id in 308 aa, and to Pseudomonas aeruginosa binding protein component precursor of ABC ribose transporter pa1946 SWALL:Q9I2F8 (EMBL:AE004621) (319 aa) fasta scores: E(): 1.6e-78, 75.47% id in 314 aa; ribose transport system, substrate-binding protein complement(2187591..2188553) Burkholderia pseudomallei K96243 3093446 YP_108434.1 CDS cbl NC_006350.1 2188911 2189837 R Similar to Escherichia coli transcriptional regulator Cbl or b1987 SWALL:CBL_ECOLI (SWALL:Q47083) (316 aa) fasta scores: E(): 2.1e-60, 54.22% id in 308 aa, and to Ralstonia solanacearum cys regulon transcriptional activator transcription regulator protein rsc1348 or rs02871 SWALL:Q8XZP7 (EMBL:AL646064) (327 aa) fasta scores: E(): 1.8e-65, 58.8% id in 301 aa; transcriptional regulator CysB-like protein complement(2188911..2189837) Burkholderia pseudomallei K96243 3094539 YP_108435.1 CDS cysA NC_006350.1 2189907 2190962 R Similar to Escherichia coli sulfate transport ATP-binding protein CysA or b2422 SWALL:CYSA_ECOLI (SWALL:P16676) (365 aa) fasta scores: E(): 2.9e-55, 58.65% id in 283 aa, and to Ralstonia solanacearum probable sulfate transport ATP-binding ABC transporter protein rsc1347 or rs02870 SWALL:Q8XZP8 (EMBL:AL646064) (372 aa) fasta scores: E(): 2.3e-69, 62.92% id in 356 aa; sulfate transport ATP-binding protein complement(2189907..2190962) Burkholderia pseudomallei K96243 3094479 YP_108436.1 CDS cysW NC_006350.1 2190976 2191854 R Similar to Escherichia coli sulfate transport system permease CysW or b2423 SWALL:CYSW_ECOLI (SWALL:P16702) (291 aa) fasta scores: E(): 4.2e-56, 54.65% id in 258 aa, and to Burkholderia cepacia CysW SWALL:Q93DX9 (EMBL:AF374458) (314 aa) fasta scores: E(): 5e-98, 90.31% id in 289 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; sulfate transport system permease complement(2190976..2191854) Burkholderia pseudomallei K96243 3091488 YP_108437.1 CDS cysT NC_006350.1 2192007 2192900 R Similar to Escherichia coli sulfate transport system permease CysT or CysU or b2424 SWALL:CYST_ECOLI (SWALL:P16701) (277 aa) fasta scores: E(): 1.1e-50, 48.52% id in 272 aa, and to Ralstonia solanacearum sulfate transport ABC transporter protein rsc1345 or rs02868 SWALL:Q8XZQ0 (EMBL:AL646064) (304 aa) fasta scores: E(): 1.2e-72, 68.38% id in 291 aa; sulfate transport system permease complement(2192007..2192900) Burkholderia pseudomallei K96243 3092830 YP_108438.1 CDS sbp NC_006350.1 2193033 2194016 R Similar to Escherichia coli sulfate-binding protein precursor Sbp or b3917 SWALL:SUBI_ECOLI (SWALL:P06997) (329 aa) fasta scores: E(): 8.9e-85, 65.01% id in 323 aa, and to Ralstonia solanacearum probable sulfate-binding precursor signal peptide protein rsc1336 or rs02858 SWALL:Q8XZQ9 (EMBL:AL646064) (336 aa) fasta scores: E(): 2.2e-92, 70.76% id in 325 aa; sulfate-binding protein complement(2193033..2194016) Burkholderia pseudomallei K96243 3093697 YP_108439.1 CDS lexA NC_006350.1 2194373 2195020 D Represses a number of genes involved in the response to DNA damage; LexA repressor 2194373..2195020 Burkholderia pseudomallei K96243 3094085 YP_108440.1 CDS BPSL1841 NC_006350.1 2195083 2195409 D hypothetical protein 2195083..2195409 Burkholderia pseudomallei K96243 3093447 YP_108441.1 CDS BPSL1842 NC_006350.1 2195443 2196177 D hypothetical protein 2195443..2196177 Burkholderia pseudomallei K96243 3092257 YP_108442.1 CDS BPSL1843 NC_006350.1 2196592 2197083 R Similar to Sulfolobus solfataricus hypothetical protein sso2778 SWALL:Q97V57 (EMBL:AE006871) (139 aa) fasta scores: E(): 9.9e-07, 25.36% id in 138 aa, and to Methanosarcina acetivorans universal stress protein ma2512 SWALL:Q8TMY3 (EMBL:AE010945) (154 aa) fasta scores: E(): 2.4e-06, 24.63% id in 138 aa. Note: Possible alternative start codon 10 residues upstream of annotated one; stress-like protein complement(2196592..2197083) Burkholderia pseudomallei K96243 3092258 YP_108443.1 CDS BPSL1844 NC_006350.1 2197307 2198227 D involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI 2197307..2198227 Burkholderia pseudomallei K96243 3092478 YP_108444.1 CDS BPSL1845 NC_006350.1 2198232 2199068 D Similar to Ralstonia solanacearum transmembrane permease ABC transporter protein rsc1975 or rs03549 SWALL:Q8XXY8 (EMBL:AL646067) (274 aa) fasta scores: E(): 2.5e-62, 63.6% id in 272 aa, and to Rhizobium sp. nodulation protein J NodJ SWALL:NODJ_RHIS3 (SWALL:P72336) (262 aa) fasta scores: E(): 3.9e-61, 64.72% id in 258 aa; ABC transporter membrane protein 2198232..2199068 Burkholderia pseudomallei K96243 3092479 YP_108445.1 CDS BPSL1846 NC_006350.1 2199174 2199671 R hypothetical protein complement(2199174..2199671) Burkholderia pseudomallei K96243 3092209 YP_108446.1 CDS BPSL1847 NC_006350.1 2199911 2200972 R Similar to Escherichia coli hypothetical protein YraQ or b3151 SWALL:YRAQ_ECOLI (SWALL:P45468) (346 aa) fasta scores: E(): 1.7e-59, 52.45% id in 347 aa, and to Methanosarcina mazei conserved protein mm2245 SWALL:AAM31941 (EMBL:AE013466) (299 aa) fasta scores: E(): 1e-10, 27.94% id in 272 aa; hypothetical protein complement(2199911..2200972) Burkholderia pseudomallei K96243 3092210 YP_108447.1 CDS BPSL1848 NC_006350.1 2201328 2202380 R Similar to Pseudomonas aeruginosa probable oxidoreductase pa4434 SWALL:Q9HVY1 (EMBL:AE004857) (345 aa) fasta scores: E(): 2.3e-78, 58% id in 350 aa, and to Escherichia coli Tas protein or b2834 SWALL:TAS_ECOLI (SWALL:Q46933) (346 aa) fasta scores: E(): 4.6e-75, 56.28% id in 350 aa; oxidoreductase complement(2201328..2202380) Burkholderia pseudomallei K96243 3094315 YP_108448.1 CDS BPSL1849 NC_006350.1 2202667 2203113 R Similar to Ralstonia solanacearum hypothetical protein rsc3389 or rs05670 SWALL:Q8XU05 (EMBL:AL646075) (182 aa) fasta scores: E(): 1.9e-22, 63.3% id in 109 aa, and to Deinococcus radiodurans hypothetical protein dra0017 SWALL:Q9RZD5 (EMBL:AE001862) (168 aa) fasta scores: E(): 3.8e-16, 41.25% id in 143 aa; hypothetical protein complement(2202667..2203113) Burkholderia pseudomallei K96243 3094316 YP_108449.1 CDS BPSL1850 NC_006350.1 2203286 2203762 D Similar to Pseudomonas aeruginosa hypothetical protein pa2713 SWALL:Q9I0C9 (EMBL:AE004699) (159 aa) fasta scores: E(): 1.4e-39, 62.41% id in 149 aa, and to Ralstonia solanacearum hypothetical protein rsp1119 or rs05500 SWALL:Q8XQU9 (EMBL:AL646083) (162 aa) fasta scores: E(): 2.9e-28, 45.62% id in 160 aa; hypothetical protein 2203286..2203762 Burkholderia pseudomallei K96243 3094338 YP_108450.1 CDS BPSL1851 NC_006350.1 2204941 2206248 D Similar to Ralstonia solanacearum glutamate symport transmembrane protein rsc1957 or rs03531 SWALL:Q8XY06 (EMBL:AL646067) (428 aa) fasta scores: E(): 7.2e-90, 57.34% id in 429 aa, and to Caulobacter crescentus sodium:dicarboxylate symporter family protein cc0263 SWALL:Q9ABG4 (EMBL:AE005699) (417 aa) fasta scores: E(): 9e-89, 60.04% id in 418 aa, and to Bacillus subtilis C4-dicarboxylate transport protein DctA or DctP SWALL:DCTA_BACSU (SWALL:P96603) (421 aa) fasta scores: E(): 6e-52, 37.01% id in 416 aa; membrane attached sodium:dicarboxylate symporter family protein 2204941..2206248 Burkholderia pseudomallei K96243 3094339 YP_108451.1 CDS BPSL1852 NC_006350.1 2206826 2207845 D Similar to Ralstonia solanacearum hypothetical protein rsc1299 or rs02821 SWALL:Q8XZU6 (EMBL:AL646063) (344 aa) fasta scores: E(): 3.1e-97, 72.61% id in 336 aa, and to Salmonella typhi hypothetical protein sty4439 SWALL:Q8Z1T1 (EMBL:AL627282) (332 aa) fasta scores: E(): 3.9e-73, 58.56% id in 321 aa; tRNA-dihydrouridine synthase A 2206826..2207845 Burkholderia pseudomallei K96243 3093392 YP_108452.1 CDS BPSL1853 NC_006350.1 2208821 2209075 R hypothetical protein complement(2208821..2209075) Burkholderia pseudomallei K96243 3093393 YP_108453.1 CDS BPSL1854 NC_006350.1 2209149 2209394 R hypothetical protein complement(2209149..2209394) Burkholderia pseudomallei K96243 3094673 YP_108454.1 CDS mopII NC_006350.1 2209475 2209690 R Similar to Clostridium pasteurianum molybdenum-pterin binding protein II MopII SWALL:MOP2_CLOPA (SWALL:P08854) (68 aa) fasta scores: E(): 2.8e-05, 47.82% id in 69 aa, and to Ralstonia solanacearum molybdopterin-binding protein rsc1342 or rs02864 SWALL:Q8XZQ3 (EMBL:AL646064) (71 aa) fasta scores: E(): 6.9e-19, 80.28% id in 71 aa; molybdenum-pterin binding protein II complement(2209475..2209690) Burkholderia pseudomallei K96243 3092330 YP_108455.1 CDS ssuB NC_006350.1 2209779 2210762 R Similar to Escherichia coli, and Escherichia coli O157:H7 aliphatic sulfonates transport ATP-binding protein SsuB or b0933 or z1281 or ecs1016 SWALL:SSUB_ECOLI (SWALL:P38053) (255 aa) fasta scores: E(): 4.6e-42, 62% id in 229 aa, and to Ralstonia solanacearum aliphatic sulfonates ATP-binding ABC transporter protein rsc1341 or rs02863 SWALL:Q8XZQ4 (EMBL:AL646064) (284 aa) fasta scores: E(): 2.8e-48, 58.3% id in 283 aa. Note: this CDS is longer in its N-terminal region than most of its database matches. Possible alternative start codon at residue 55; aliphatic sulfonates transport ATP-binding protein complement(2209779..2210762) Burkholderia pseudomallei K96243 3094098 YP_108456.1 CDS ssuC NC_006350.1 2210759 2211580 R Similar to Escherichia coli aliphatic sulfonates transport permease SsuC or b0934 SWALL:SSUC_ECOLI (SWALL:P75851) (263 aa) fasta scores: E(): 4.1e-63, 66.66% id in 246 aa, and to Ralstonia solanacearum aliphatic sulfonates transmembrane ABC transporter protein rsc1340 or rs02862 SWALL:Q8XZQ5 (EMBL:AL646064) (264 aa) fasta scores: E(): 5.8e-67, 71.82% id in 252 aa; aliphatic sulfonates transport permease complement(2210759..2211580) Burkholderia pseudomallei K96243 3092696 YP_108457.1 CDS ssuD NC_006350.1 2211598 2212755 R catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase complement(2211598..2212755) Burkholderia pseudomallei K96243 3094518 YP_108458.1 CDS BPSL1859 NC_006350.1 2213101 2213565 D hypothetical protein 2213101..2213565 Burkholderia pseudomallei K96243 3094674 YP_108459.1 CDS BPSL1860 NC_006350.1 2214022 2215164 R catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase complement(2214022..2215164) Burkholderia pseudomallei K96243 3093980 YP_108460.1 CDS qacE NC_006350.1 2215194 2215532 R Similar to Escherichia coli, Salmonella typhimurium, and Pseudomonas aeruginosa ethidium bromide resistance protein Ebr or E1 SWALL:EBR_ECOLI (SWALL:P14502) (115 aa) fasta scores: E(): 1.7e-16, 53% id in 100 aa, and to the plasmid borne Escherichia coli, and Klebsiella aerogenes quaternary ammonium compound-resistance protein QacE SWALL:QACE_ECOLI (SWALL:Q57225) (110 aa) fasta scores: E(): 1.3e-20, 58.18% id in 110 aa; quaternary ammonium compound-resistance protein complement(2215194..2215532) Burkholderia pseudomallei K96243 3092043 YP_108461.1 CDS BPSL1862 NC_006350.1 2215537 2216034 R Similar to Rhizobium meliloti hypothetical protein r02983 or smc03110 SWALL:YT83_RHIME (SWALL:P29953) (164 aa) fasta scores: E(): 3.3e-26, 51.85% id in 162 aa, and to Streptomyces coelicolor hypothetical protein sco2848 or sce20.22 SWALL:Q9RDA3 (EMBL:AL136058) (158 aa) fasta scores: E(): 1.1e-20, 50% id in 142 aa; hypothetical protein complement(2215537..2216034) Burkholderia pseudomallei K96243 3093981 YP_108462.1 CDS BPSL1863 NC_006350.1 2216754 2217299 D Similar to Ralstonia solanacearum hypothetical protein rsc1618 or rs03981 SWALL:Q8XYY8 (EMBL:AL646065) (195 aa) fasta scores: E(): 2.6e-54, 71.19% id in 184 aa, and to Pseudomonas aeruginosa hypothetical protein pa3755 SWALL:Q9HXP0 (EMBL:AE004794) (184 aa) fasta scores: E(): 4.4e-46, 65.08% id in 169 aa; hypothetical protein 2216754..2217299 Burkholderia pseudomallei K96243 3091582 YP_108463.1 CDS aat NC_006350.1 2217308 2218075 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2217308..2218075 Burkholderia pseudomallei K96243 3091583 YP_108464.1 CDS BPSL1865 NC_006350.1 2218109 2218939 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2218109..2218939 Burkholderia pseudomallei K96243 3091963 YP_108465.1 CDS pyrD NC_006350.1 2219044 2220072 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2219044..2220072 Burkholderia pseudomallei K96243 3093839 YP_108466.1 CDS BPSL1867 NC_006350.1 2220192 2220986 D Similar to Escherichia coli cystine-binding periplasmic protein precursor FliY or b1920 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 5.1e-35, 42.1% id in 266 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa0314 SWALL:Q9I6H7 (EMBL:AE004469) (256 aa) fasta scores: E(): 8.7e-54, 57.97% id in 257 aa, and to; ABC transporter cystine-binding protein 2220192..2220986 Burkholderia pseudomallei K96243 3091964 YP_108467.1 CDS BPSL1868 NC_006350.1 2221116 2221775 D Similar to Brucella suis 1330 amino acid ABC transporter permease bra0683 SWALL:AAN33870 (EMBL:AE014564) (226 aa) fasta scores: E(): 1.1e-34, 51.62% id in 215 aa, and to Caulobacter crescentus cystine ABC tranporter, permease, cc1440 SWALL:Q9A8B4 (EMBL:AE005818) (219 aa) fasta scores: E(): 3.9e-34, 54.46% id in 213 aa; ABC transporter membrane protein 2221116..2221775 Burkholderia pseudomallei K96243 3092263 YP_108468.1 CDS BPSL1869 NC_006350.1 2222175 2223158 R Similar to Bacillus subtilis hypothetical oxidoreductase YulF SWALL:YULF_BACSU (SWALL:O05265) (328 aa) fasta scores: E(): 2.3e-25, 33.84% id in 328 aa, and to Streptomyces coelicolor oxidoreductase sco2285 or scc75a.31 SWALL:Q9RKP3 (EMBL:AL133220) (351 aa) fasta scores: E(): 5.8e-21, 31.49% id in 327 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; oxidoreductase complement(2222175..2223158) Burkholderia pseudomallei K96243 3092264 YP_108469.1 CDS BPSL1870 NC_006350.1 2223258 2223971 R Similar to Caulobacter crescentus transcriptional regulator, GntR family cc0783 SWALL:Q9AA25 (EMBL:AE005754) (242 aa) fasta scores: E(): 4.1e-18, 36.53% id in 219 aa, and to Streptomyces coelicolor GntR-famly transcriptional regulator sco1177 or scg11a.08 SWALL:Q9RJZ3 (EMBL:AL133210) (246 aa) fasta scores: E(): 3e-16, 34.07% id in 226 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; GntR family transcriptional regulator complement(2223258..2223971) Burkholderia pseudomallei K96243 3092305 YP_108470.1 CDS rpiA NC_006350.1 2224309 2225004 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(2224309..2225004) Burkholderia pseudomallei K96243 3094103 YP_108471.1 CDS BPSL1872 NC_006350.1 2225273 2226172 R Similar to Escherichia coli probable N-acetylmuramoyl-L-alanine amidase YbjR or b0867 SWALL:YBJR_ECOLI (SWALL:P75820) (276 aa) fasta scores: E(): 4.4e-49, 52.57% id in 272 aa, and to Salmonella typhi N-acetylmuramoyl-L-alanine amidase sty0927 SWALL:Q8Z834 (EMBL:AL627268) (276 aa) fasta scores: E(): 1.6e-45, 49.62% id in 268 aa; N-acetylmuramoyl-L-alanine amidase complement(2225273..2226172) Burkholderia pseudomallei K96243 3092306 YP_108472.1 CDS BPSL1873 NC_006350.1 2226546 2227289 R Similar to Ralstonia solanacearum tRNA/rRNA methyltransferase rsc1229 or rs02736 SWALL:Q8Y016 (EMBL:AL646063) (249 aa) fasta scores: E(): 3.6e-64, 74.07% id in 243 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical tRNA/rRNA methyltransferase YjfH or b4180 or z5787 or ecs5156 SWALL:YJFH_ECOLI (SWALL:P39290) (243 aa) fasta scores: E(): 2.8e-41, 52.69% id in 241 aa; tRNA/rRNA methyltransferase complement(2226546..2227289) Burkholderia pseudomallei K96243 3091946 YP_108473.1 CDS BPSL1874 NC_006350.1 2227421 2229955 R Similar to Escherichia coli ribonuclease R Rnr or VacB or b4179 SWALL:RNR_ECOLI (SWALL:P21499) (813 aa) fasta scores: E(): 7.6e-100, 46.25% id in 828 aa, and to Ralstonia solanacearum probable exoribonuclease RNAse R Rnr or rsc1228 or rs02877 SWALL:Q8Y017 (EMBL:AL646063) (871 aa) fasta scores: E(): 1.3e-208, 69.3% id in 808 aa. Note: Possible alternative start codon at residue 16; ribonuclease complement(2227421..2229955) Burkholderia pseudomallei K96243 3091947 YP_108474.1 CDS BPSL1875 NC_006350.1 2230595 2232307 R Similar to Ralstonia solanacearum methyl-accepting chemotaxis transducer transmembrane protein rsp1027 or rs02364 SWALL:Q8XR41 (EMBL:AL646082) (524 aa) fasta scores: E(): 2.6e-50, 41.45% id in 550 aa, and C-terminail region similar to C-terminal region of Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 9.8e-47, 50% id in 338 aa. Note: C-terminal region also smilar to C-terminal region of BPSL1829 (635 aa) fasta scores: E(): 1.7e-48, 49.231% identity in 390 aa overlap; methyl-accepting chemotaxis protein complement(2230595..2232307) Burkholderia pseudomallei K96243 3094733 YP_108475.1 CDS BPSL1876 NC_006350.1 2232808 2234328 D Similar to Arabidopsis thaliana phospholipase t12j13.18 or t21p5.4 SWALL:Q9S816 (EMBL:AC009327) (521 aa) fasta scores: E(): 3.4e-32, 30.87% id in 502 aa, and to Sulfolobus solfataricus acid phosphatase, sso2789 SWALL:Q97V43 (EMBL:AE006873) (511 aa) fasta scores: E(): 5.1e-08, 25.63% id in 476 aa; phospholipase 2232808..2234328 Burkholderia pseudomallei K96243 3094734 YP_108476.1 CDS BPSL1877 NC_006350.1 2234635 2236161 D Similar to Rhizobium etli hypothetical protein yh037 SWALL:AAM54971 (EMBL:U80928) (540 aa) fasta scores: E(): 4.9e-19, 30.4% id in 500 aa; hypothetical protein 2234635..2236161 Burkholderia pseudomallei K96243 3094689 YP_108477.1 CDS BPSL1878 NC_006350.1 2236553 2238265 R Similar to Ralstonia solanacearum sulfate transporter transmembrane protein rsp1519 or rs04796 SWALL:Q8XPW7 (EMBL:AL646085) (567 aa) fasta scores: E(): 5e-146, 73.22% id in 564 aa, and to Corynebacterium glutamicum sulfate permease and related transporters cgl1051 SWALL:BAB98444 (EMBL:AP005277) (579 aa) fasta scores: E(): 1.4e-38, 28.59% id in 514 aa; sulfate transporter membrane protein complement(2236553..2238265) Burkholderia pseudomallei K96243 3094690 YP_108478.1 CDS BPSL1879 NC_006350.1 2238312 2238938 R Similar to Rhizobium loti hypothetical protein mlr0735 SWALL:Q98M47 (EMBL:AP002995) (207 aa) fasta scores: E(): 1.3e-36, 50.77% id in 193 aa, and to Ralstonia solanacearum hypothetical protein rsc0706 or rs05147 SWALL:Q8Y1I4 (EMBL:AL646060) (218 aa) fasta scores: E(): 1.4e-33, 47.64% id in 191 aa; hypothetical protein complement(2238312..2238938) Burkholderia pseudomallei K96243 3094705 YP_108479.1 CDS BPSL1880 NC_006350.1 2239082 2239606 R Similar to Caulobacter crescentus acetyltransferase, GNAT family cc0213 SWALL:Q9ABL4 (EMBL:AE005695) (182 aa) fasta scores: E(): 1e-12, 37.74% id in 151 aa, and to Bacillus subtilis hypothetical protein YkkB SWALL:YKKB_BACSU (SWALL:P49855) (172 aa) fasta scores: E(): 4.1e-08, 33.33% id in 150 aa; acetyltransferase complement(2239082..2239606) Burkholderia pseudomallei K96243 3094706 YP_108480.1 CDS BPSL1881 NC_006350.1 2240052 2241272 D Similar to Salmonella typhi metabolite transport protein sty0387 SWALL:Q8Z914 (EMBL:AL627266) (417 aa) fasta scores: E(): 7.5e-95, 58.35% id in 401 aa, and to Escherichia coli hypothetical metabolite transport protein YjhB or b4279 SWALL:YJHB_ECOLI (SWALL:P39352) (405 aa) fasta scores: E(): 5.1e-29, 27.91% id in 394 aa; metabolite transport, membrane protein 2240052..2241272 Burkholderia pseudomallei K96243 3094066 YP_108481.1 CDS BPSL1882 NC_006350.1 2241489 2242445 D Similar to Ralstonia solanacearum transcription regulator protein rsc0538 or rs04928 SWALL:Q8Y1Z9 (EMBL:AL646059) (340 aa) fasta scores: E(): 2.4e-36, 48.06% id in 310 aa, and to the N-terminal region of Xanthomonas campestris transcriptional regulator TetR family PsrA or xcc1980 SWALL:AAM41269 (EMBL:AE012302) (210 aa) fasta scores: E(): 5.7e-15, 45.5% id in 167 aa; TetR family regulatory protein 2241489..2242445 Burkholderia pseudomallei K96243 3094067 YP_108482.1 CDS BPSL1883 NC_006350.1 2242630 2244402 D Similar to Escherichia coli long-chain-fatty-acid--CoA ligase FadD or OldD or b1805 SWALL:LCFA_ECOLI (SWALL:P29212) (561 aa) fasta scores: E(): 1e-118, 55.59% id in 563 aa, and to Yersinia pestis KIM acyl-CoA synthetase FadD SWALL:AAM85796 (EMBL:AE013826) (579 aa) fasta scores: E(): 4.9e-120, 57.7% id in 558 aa; acyl-CoA synthetase 2242630..2244402 Burkholderia pseudomallei K96243 3094522 YP_108483.1 CDS BPSL1884 NC_006350.1 2244462 2245421 D Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc0534 or rs04934 SWALL:Q8Y203 (EMBL:AL646059) (298 aa) fasta scores: E(): 1.2e-37, 39.31% id in 290 aa; hypothetical protein 2244462..2245421 Burkholderia pseudomallei K96243 3094523 YP_108484.1 CDS BPSL1885 NC_006350.1 2245609 2245881 R Similar to Ralstonia solanacearum probable signal peptide protein rsp0708 or rs01741 SWALL:Q8XRX3 (EMBL:AL646080) (106 aa) fasta scores: E(): 0.00013, 41.12% id in 107 aa; hypothetical protein complement(2245609..2245881) Burkholderia pseudomallei K96243 3091754 YP_108485.1 CDS BPSL1885A NC_006350.1 2246186 2246836 D N-terminal region is similar to Escherichia coli, and Escherichia coli O157:H7 Hfq protein or b4172 or z5779 or ecs5148 SWALL:HFQ_ECOLI (SWALL:P25521) (101 aa) fasta scores: E(): 1.5e-07, 50.66% id in 75 aa, and to Pseudomonas syringae Hfq protein PSPTO4942 SWALL:HFQ_PSESM (SWALL:Q87VJ4) (86 aa) fasta scores: E(): 0.0038, 46.98% id in 83 aa. CDS lacks an appropriate stop codon and is extended at the the C-terminus in comparison to orthologues. C-terminal region of the CDS contains a repeat region. Possible pseudogene, the effect the sequence extension on the function of the protein is not known; Hfq protein 2246186..2246836 Burkholderia pseudomallei K96243 3091755 YP_108486.1 CDS BPSL1886 NC_006350.1 2246987 2247718 R Similar to Ralstonia solanacearum lipoprotein rsp1078 or rs02585 SWALL:Q8XQZ0 (EMBL:AL646082) (248 aa) fasta scores: E(): 4.3e-20, 42.62% id in 251 aa; hypothetical protein complement(2246987..2247718) Burkholderia pseudomallei K96243 3091423 YP_108487.1 CDS BPSL1887 NC_006350.1 2247791 2249182 R Similar to Ralstonia solanacearum probable sigma-54 interacting transcription regulator protein rsp1079 or rs02586 SWALL:Q8XQY9 (EMBL:AL646082) (467 aa) fasta scores: E(): 2.4e-101, 58.35% id in 461 aa, and C-terminal region to the C-terminal region of Pseudomonas aeruginosa type 4 fimbriae expression regulatory protein PilR or pa4547 SWALL:PILR_PSEAE (SWALL:Q00934) (445 aa) fasta scores: E(): 2e-36, 40.05% id in 352 aa; sigma-54 related transcriptional regulatory protein complement(2247791..2249182) Burkholderia pseudomallei K96243 3091424 YP_108488.1 CDS BPSL1888 NC_006350.1 2249199 2250905 R Similar to Ralstonia solanacearum probable transmembrane protein rsp1080 or rs02587 SWALL:Q8XQY8 (EMBL:AL646082) (541 aa) fasta scores: E(): 1e-35, 34.76% id in 584 aa, and to Agrobacterium tumefaciens hypothetical protein atu1609 or agr_c_2962 SWALL:Q8UEZ4 (EMBL:AE009118) (579 aa) fasta scores: E(): 3.8e-06, 25.71% id in 599 aa; hypothetical protein complement(2249199..2250905) Burkholderia pseudomallei K96243 3093705 YP_108489.1 CDS BPSL1889 NC_006350.1 2251015 2251410 R lipoprotein complement(2251015..2251410) Burkholderia pseudomallei K96243 3093706 YP_108490.1 CDS BPSL1890 NC_006350.1 2251432 2252397 R Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsp1082 or rs02589 SWALL:Q8XQY6 (EMBL:AL646082) (305 aa) fasta scores: E(): 1.6e-10, 44.28% id in 271 aa, and to Pseudomonas aeruginosa hypothetical protein pa4299 SWALL:Q9HWA1 (EMBL:AE004846) (245 aa) fasta scores: E(): 3.5e-05, 33.33% id in 222 aa; lipoprotein complement(2251432..2252397) Burkholderia pseudomallei K96243 3091584 YP_108491.1 CDS BPSL1891 NC_006350.1 2252404 2253429 R Similar to Ralstonia solanacearum tight adherence TadC related transmembrane protein rsp1083 or rs02590 SWALL:Q8XQY5 (EMBL:AL646082) (326 aa) fasta scores: E(): 1.2e-44, 47.18% id in 337 aa, and to Rhizobium meliloti hypothetical transmembrane protein r00146 or smc02822 SWALL:Q92T37 (EMBL:AL591782) (327 aa) fasta scores: E(): 1e-06, 24.52% id in 318 aa; outer-membrane protein complement(2252404..2253429) Burkholderia pseudomallei K96243 3091585 YP_108492.1 CDS BPSL1892 NC_006350.1 2253426 2254433 R Similar to Ralstonia solanacearum probable pilus assembly transmembrane protein rsp1084 or rs02591 SWALL:Q8XQY4 (EMBL:AL646082) (308 aa) fasta scores: E(): 1.5e-31, 38.62% id in 334 aa, and to Chlorobium tepidum TadD protein or ct0435 SWALL:AAM71681 (EMBL:AE012821) (305 aa) fasta scores: E(): 2.3e-09, 25.48% id in 259 aa; fimbriae-related outer membrane protein complement(2253426..2254433) Burkholderia pseudomallei K96243 3091432 YP_108493.1 CDS BPSL1893 NC_006350.1 2254426 2255769 R Similar to Ralstonia solanacearum probable secretion ATPase CpaF2 or rsp1085 or rs02592 SWALL:Q8XQY3 (EMBL:AL646082) (450 aa) fasta scores: E(): 7.2e-134, 78.54% id in 452 aa, and to Agrobacterium tumefaciens component of type IV pilus CtpG or atu0218 or agr_c_373 SWALL:Q8UIS4 (EMBL:AE008995) (491 aa) fasta scores: E(): 6.2e-62, 42.48% id in 426 aa; type II/IV secretion system ATP-binding protein complement(2254426..2255769) Burkholderia pseudomallei K96243 3091433 YP_108494.1 CDS BPSL1894 NC_006350.1 2255773 2257011 R Similar to the plasmid borne Ralstonia solanacearum probable pilus assembly protein rsp1086 or rs02593 SWALL:Q8XQY2 (EMBL:AL646082) (439 aa) fasta scores: E(): 8.5e-50, 43% id in 400 aa, and to Caulobacter crescentus pilus assembly protein cc2943 SWALL:Q9A495 (EMBL:AE005958) (517 aa) fasta scores: E(): 5e-10, 24.4% id in 377 aa; fimbriae assembly protein complement(2255773..2257011) Burkholderia pseudomallei K96243 3093182 YP_108495.1 CDS BPSL1895 NC_006350.1 2257078 2258403 R Similar to Ralstonia solanacearum probable outer membrane channel signal peptide protein rsp1087 or rs02594 SWALL:Q8XQY1 (EMBL:AL646082) (454 aa) fasta scores: E(): 1.6e-75, 52.21% id in 452 aa, and to Rhizobium loti pilus assembly protein mll6479 SWALL:Q989D0 (EMBL:AP003009) (481 aa) fasta scores: E(): 1.7e-27, 32.5% id in 400 aa; exported fimbriae assembly protein complement(2257078..2258403) Burkholderia pseudomallei K96243 3093183 YP_108496.1 CDS BPSL1896 NC_006350.1 2258467 2259366 R Similar to the palsmid borne Ralstonia solanacearum probable signal peptide protein rsp1089 or rs02596 SWALL:Q8XQX9 (EMBL:AL646082) (208 aa) fasta scores: E(): 2.2e-15, 40.9% id in 198 aa, and to Rhizobium meliloti probable CpaB2 pilus assembly protein or ra0856 or sma1576 SWALL:Q92YL7 (EMBL:AE007272) (263 aa) fasta scores: E(): 2e-05, 29.83% id in 238 aa; membrane fimbriae assembly protein complement(2258467..2259366) Burkholderia pseudomallei K96243 3094657 YP_108497.1 CDS BPSL1897 NC_006350.1 2259446 2259913 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1090 or rs02595 SWALL:Q8XQX8 (EMBL:AL646082) (163 aa) fasta scores: E(): 1.9e-14, 43.5% id in 154 aa, and to Pseudomonas aeruginosa hypothetical protein pa4294 SWALL:Q9HWA6 (EMBL:AE004845) (168 aa) fasta scores: E(): 2.6e-05, 33.11% id in 151 aa; hypothetical protein complement(2259446..2259913) Burkholderia pseudomallei K96243 3094658 YP_108498.1 CDS BPSL1898 NC_006350.1 2259910 2260410 R Similar to the plasmid borne Ralstonia solanacearum probable prepilin peptidase transmembrane protein CpaA2 or rsp1091 or rs02612 SWALL:Q8XQX7 (EMBL:AL646082) (168 aa) fasta scores: E(): 8.9e-11, 38.88% id in 162 aa, and to the C-terminal region of Escherichia coli type 4 prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase (prepilin peptidase); n- methyltransferase HofD or HopD or HopO or b3335 SWALL:LEP4_ECOLI (SWALL:P25960) (225 aa) fasta scores: E(): 0.0086, 25.67% id in 148 aa; hypothetical protein complement(2259910..2260410) Burkholderia pseudomallei K96243 3093974 YP_108499.1 CDS BPSL1899 NC_006350.1 2260493 2260663 R Similar to Rhizobium meliloti probable pilus assembly protein PilA2 or ra0853 or sma1570 SWALL:Q92YM0 (EMBL:AE007272) (56 aa) fasta scores: E(): 2.4e-07, 54.71% id in 53 aa, and to Caulobacter crescentus PilA or cc2948 SWALL:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 1.2e-05, 48.21% id in 56 aa; fimbriae assembly-like protein complement(2260493..2260663) Burkholderia pseudomallei K96243 3093975 YP_108500.1 CDS BPSL1900 NC_006350.1 2260771 2260908 R hypothetical protein complement(2260771..2260908) Burkholderia pseudomallei K96243 3093982 YP_108501.1 CDS BPSL1901 NC_006350.1 2261328 2262917 D Similar to Ralstonia solanacearum hemagglutinin-related transmembrane protein rsp1094 or rs02600 SWALL:Q8XQX4 (EMBL:AL646082) (459 aa) fasta scores: E(): 9.5e-39, 45.26% id in 517 aa. Note: Contains a high glycine and serine amino acid residues content region in the N-terminal region and 3x repeat in the C-terminal region (VSTVTGALSGATGG). Also similar to BPSS1974 (573 aa) fasta scores: E(): 3.2e-43, 48.289% identity in 526 aa overlap; hypothetical protein 2261328..2262917 Burkholderia pseudomallei K96243 3093983 YP_108502.1 CDS BPSL1902 NC_006350.1 2262967 2264232 D Similar to Ralstonia solanacearum hemagglutinin-related transmembrane protein rsp1094 or rs02600 SWALL:Q8XQX4 (EMBL:AL646082) (459 aa) fasta scores: E(): 6.2e-32, 43.89% id in 426 aa. Note: Also similar to BPSL1901 (558 aa) fasta scores: E(): 1.6e-34, 45.366% identity in 410 aa overlap; hypothetical protein 2262967..2264232 Burkholderia pseudomallei K96243 3094579 YP_108503.1 CDS BPSL1903 NC_006350.1 2264383 2266062 D Similar to Ralstonia solanacearum probable activation/secretion signal peptide protein rsp1095 or rs02601 SWALL:Q8XQX3 (EMBL:AL646082) (557 aa) fasta scores: E(): 1.8e-89, 45.21% id in 564 aa, and to Haemophilus influenzae heme/hemopexin utilization protein B precursor HxuB SWALL:HXB2_HAEIN (SWALL:P45356) (565 aa) fasta scores: E(): 7.5e-11, 20.52% id in 531 aa; exported heme utilisation-like protein 2264383..2266062 Burkholderia pseudomallei K96243 3094580 YP_108504.1 CDS BPSL1904 NC_006350.1 2266285 2266767 D Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2798 or rs05621 SWALL:Q8XVN2 (EMBL:AL646071) (152 aa) fasta scores: E(): 3.8e-26, 58.04% id in 143 aa, and to Xanthomonas campestris hypothetical protein xcc1341 SWALL:AAM40639 (EMBL:AE012233) (159 aa) fasta scores: E(): 1.5e-24, 50.99% id in 151 aa; hypothetical protein 2266285..2266767 Burkholderia pseudomallei K96243 3093668 YP_108505.1 CDS BPSL1905 NC_006350.1 2267004 2267414 R Similar to Rhizobium loti transposase mlr9643 SWALL:Q98P22 (EMBL:AP003017) (127 aa) fasta scores: E(): 1.8e-11, 34.82% id in 112 aa, and to Agrobacterium tumefaciens hypothetical 15.7 kDa protein SWALL:Q44424 (EMBL:M55562) (137 aa) fasta scores: E(): 2e-11, 35.71% id in 112 aa; transposase complement(2267004..2267414) Burkholderia pseudomallei K96243 3093669 YP_108506.1 CDS BPSL1906 NC_006350.1 2267610 2268707 R Similar to Ralstonia solanacearum hypothetical protein rsc1272 or rs02810 SWALL:Q8XZX3 (EMBL:AL646063) (365 aa) fasta scores: E(): 1.1e-121, 80% id in 365 aa, and to Neisseria meningitidis nucleotide-binding protein nma1520 or nmb1306 SWALL:Q9JRK2 (EMBL:AL162756) (383 aa) fasta scores: E(): 1.7e-64, 47.72% id in 352 aa; hypothetical protein complement(2267610..2268707) Burkholderia pseudomallei K96243 3093678 YP_108507.1 CDS odhL NC_006350.1 2268814 2270244 R E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(2268814..2270244) Burkholderia pseudomallei K96243 3094406 YP_108508.1 CDS sucB NC_006350.1 2270344 2271621 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(2270344..2271621) Burkholderia pseudomallei K96243 3093009 YP_108509.1 CDS sucA NC_006350.1 2271756 2274620 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 complement(2271756..2274620) Burkholderia pseudomallei K96243 3094519 YP_108510.1 CDS BPSL1910 NC_006350.1 2274974 2276437 D Similar to Thermoanaerobacter tengcongensis transposase TTE0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 4.3e-74, 43.54% id in 457 aa, and to Pseudomonas sp. transposase TnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 1.5e-32, 30.88% id in 476 aa; transposase 2274974..2276437 Burkholderia pseudomallei K96243 3093679 YP_108511.1 CDS typA NC_006350.1 2276550 2278376 R Similar to Escherichia coli GTP-binding protein TypA or BipA or b3871 SWALL:TYPA_ECOLI (SWALL:P32132) (591 aa) fasta scores: E(): 3.3e-139, 65.7% id in 592 aa, and to Ralstonia solanacearum probable GTP-binding elongation factor protein rsc1296 or rs02818 SWALL:Q8XZU9 (EMBL:AL646063) (606 aa) fasta scores: E(): 3.2e-185, 84.71% id in 602 aa; GTP-binding protein complement(2276550..2278376) Burkholderia pseudomallei K96243 3091717 YP_108512.1 CDS BPSL1912 NC_006350.1 2278669 2279166 D Similar to Ralstonia solanacearum transcription regulator protein rsc1295 or rs02817 SWALL:Q8XZV0 (EMBL:AL646063) (147 aa) fasta scores: E(): 8.6e-20, 48.5% id in 134 aa, and to Burkholderia pseudomallei hypothetical 18.0 kDa protein SWALL:Q9ZF73 (EMBL:AF110185) (163 aa) fasta scores: E(): 4.1e-13, 34.02% id in 144 aa; transcriptional regulatory protein 2278669..2279166 Burkholderia pseudomallei K96243 3092472 YP_108513.1 CDS BPSL1913 NC_006350.1 2279266 2280762 D Similar to Ralstonia solanacearum outer membrane chanel lipoprotein rsc1294 or rs02807 SWALL:Q8XZV1 (EMBL:AL646063) (489 aa) fasta scores: E(): 1.9e-77, 48.72% id in 470 aa, and to Xanthomonas axonopodis outer membrane efflux protein YjcP or xac1444 SWALL:AAM36315 (EMBL:AE011776) (496 aa) fasta scores: E(): 6.1e-56, 38.46% id in 481 aa; hypothetical protein 2279266..2280762 Burkholderia pseudomallei K96243 3092473 YP_108514.1 CDS emrA NC_006350.1 2280830 2282065 D Similar to Escherichia coli multidrug resistance protein A EmrA or b2685 SWALL:EMRA_ECOLI (SWALL:P27303) (390 aa) fasta scores: E(): 1e-62, 49.74% id in 390 aa, and to Ralstonia solanacearum probable multidrug resistance A EmrA or rsc1293 or rs02806 SWALL:Q8XZV2 (EMBL:AL646063) (428 aa) fasta scores: E(): 1.2e-87, 63.48% id in 408 aa; multidrug resistance protein A 2280830..2282065 Burkholderia pseudomallei K96243 3093432 YP_108515.1 CDS emrB NC_006350.1 2282088 2283647 D Similar to Escherichia coli, and Escherichia coli O157:H7 multidrug resistance protein B EmrB or b2686 or z3987 or ecs3548 SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 7.5e-110, 54.54% id in 506 aa, and to Ralstonia solanacearum probable multidrug resistance B EmrB or rsc1292 or rs02805 SWALL:Q8XZV3 (EMBL:AL646063) (518 aa) fasta scores: E(): 6.8e-144, 67.95% id in 518 aa; multidrug resistance protein B 2282088..2283647 Burkholderia pseudomallei K96243 3093265 YP_108516.1 CDS truB NC_006350.1 2283918 2284853 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(2283918..2284853) Burkholderia pseudomallei K96243 3092486 YP_108517.1 CDS rbfA NC_006350.1 2284880 2285248 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(2284880..2285248) Burkholderia pseudomallei K96243 3093801 YP_108518.1 CDS infB NC_006350.1 2285354 2288281 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(2285354..2288281) Burkholderia pseudomallei K96243 3093280 YP_108519.1 CDS nusA NC_006350.1 2288373 2289848 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(2288373..2289848) Burkholderia pseudomallei K96243 3093347 YP_108520.1 CDS BPSL1920 NC_006350.1 2289845 2290306 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(2289845..2290306) Burkholderia pseudomallei K96243 3093802 YP_108521.1 CDS BPSL1921 NC_006350.1 2290611 2292275 R Similar to Ralstonia solanacearum hypothetical protein rsc1286 rsc1286 or rs02799 SWALL:Q8XZV9 (EMBL:AL646063) (598 aa) fasta scores: E(): 5.5e-61, 52.25% id in 576 aa, and central to C-terminal parts to the rest of the database matches, e.g. Escherichia coli O157:H7 orf, hypothetical protein YciL or z2541 or ecs1841 SWALL:Q8X4Q8 (EMBL:AE005380) (290 aa) fasta scores: E(): 4.8e-34, 57.2% id in 250 aa; hypothetical protein complement(2290611..2292275) Burkholderia pseudomallei K96243 3092190 YP_108522.1 CDS BPSL1922 NC_006350.1 2292339 2293706 R Similar to Ralstonia solanacearum hypothetical protein rsc1285 or rs02798 SWALL:Q8XZW0 (EMBL:AL646063) (304 aa) fasta scores: E(): 5.4e-48, 58.73% id in 315 aa, and to Xanthomonas axonopodis hypothetical protein xac2317 SWALL:Q8PK59 (EMBL:AE011869) (412 aa) fasta scores: E(): 2.4e-25, 36.71% id in 444 aa. Note: From approximately residue 180 this CDS does not present any significant database matches appart from the two described above; hypothetical protein complement(2292339..2293706) Burkholderia pseudomallei K96243 3092191 YP_108523.1 CDS BPSL1923 NC_006350.1 2294125 2295027 R Similar to Bacillus subtilis transcriptional regulatory protein GltC SWALL:GLTC_BACSU (SWALL:P20668) (300 aa) fasta scores: E(): 4.3e-19, 28.76% id in 299 aa, and to Ralstonia solanacearum probable transcription regulator transcription regulator protein rsc2537 or rs00708 SWALL:Q8XWD7 (EMBL:AL646070) (297 aa) fasta scores: E(): 8.5e-64, 59.45% id in 296 aa; transcriptional regulator complement(2294125..2295027) Burkholderia pseudomallei K96243 3091898 YP_108524.1 CDS BPSL1924 NC_006350.1 2295449 2295847 D Possible gene remnant. No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of Shigella flexneri IS1650 protein orfA S0204 SWALL:Q9AFP3 (EMBL:AF348706) (149 aa) fasta scores: E(): 3.7e-07, 38.27% id in 81 aa, and Pantoea agglomerans transposase A SWALL:Q9AM92 (EMBL:AF327444) (149 aa) fasta scores: E(): 1e-06, 38.27% id in 81 aa; hypothetical protein 2295449..2295847 Burkholderia pseudomallei K96243 3091899 YP_108525.1 CDS BPSL1925 NC_006350.1 2296086 2296310 D hypothetical protein 2296086..2296310 Burkholderia pseudomallei K96243 3093711 YP_108526.1 CDS BPSL1926 NC_006350.1 2296471 2296788 R hypothetical protein complement(2296471..2296788) Burkholderia pseudomallei K96243 3093712 YP_108527.1 CDS BPSL1927 NC_006350.1 2296989 2297711 D Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc0146 or rs01016 SWALL:Q8Y335 (EMBL:AL646057) (251 aa) fasta scores: E(): 1e-22, 37.71% id in 236 aa, and to Xanthomonas axonopodis hypothetical protein xac1712 SWALL:AAM36579 (EMBL:AE011803) (253 aa) fasta scores: E(): 1.5e-20, 37.13% id in 237 aa; hypothetical protein 2296989..2297711 Burkholderia pseudomallei K96243 3091702 YP_108528.1 CDS BPSL1929 NC_006350.1 2297950 2298228 D Very low similarities to database matches. Similar to Ralstonia solanacearum probable signal peptide protein rsc2280 or rs01277 SWALL:Q8XX38 (EMBL:AL646069) (91 aa) fasta scores: E(): 2.1, 40.44% id in 89 aa; hypothetical protein 2297950..2298228 Burkholderia pseudomallei K96243 3091703 YP_108529.1 CDS BPSL1930 NC_006350.1 2298377 2298634 D hypothetical protein 2298377..2298634 Burkholderia pseudomallei K96243 3094794 YP_108530.1 CDS BPSL1931 NC_006350.1 2298684 2298974 R Similar to Neisseria meningitidis hypothetical protein nmb1575 SWALL:Q9JYI1 (EMBL:AE002508) (97 aa) fasta scores: E(): 5.4e-11, 38.54% id in 96 aa, and to Yersinia pestis hypothetical protein ypo1588 SWALL:Q8ZFU3 (EMBL:AJ414149) (95 aa) fasta scores: E(): 5e-09, 38.29% id in 94 aa; hypothetical protein complement(2298684..2298974) Burkholderia pseudomallei K96243 3094795 YP_108531.1 CDS tnpA NC_006350.1 2299152 2300372 D Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 3.6e-138, 78.32% id in 406 aa, and to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.8e-162, 99.22% id in 386 aa. CDS is extended at the N-terminus in comparison to B. mallei protein; transposase 2299152..2300372 Burkholderia pseudomallei K96243 3092421 YP_108532.1 CDS BPSL1933 NC_006350.1 2300849 2302075 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1146 or rs04607 SWALL:Q8Y098 (EMBL:AL646062) (398 aa) fasta scores: E(): 1e-27, 38.98% id in 395 aa, and to Neisseria meningitidis hypothetical protein nmb0928 SWALL:Q9JZR5 (EMBL:AE002444) (398 aa) fasta scores: E(): 9.5e-23, 30.93% id in 417 aa; hypothetical protein complement(2300849..2302075) Burkholderia pseudomallei K96243 3091550 YP_108533.1 CDS BPSL1934 NC_006350.1 2302404 2302895 D hypothetical protein 2302404..2302895 Burkholderia pseudomallei K96243 3091551 YP_108534.1 CDS BPSL1935 NC_006350.1 2303059 2304126 D hypothetical protein 2303059..2304126 Burkholderia pseudomallei K96243 3091645 YP_108535.1 CDS BPSL1936 NC_006350.1 2304829 2306013 D Similar to Pseudomonas aeruginosa hypothetical protein pa5458 SWALL:Q9HTB2 (EMBL:AE004958) (380 aa) fasta scores: E(): 7e-50, 43.84% id in 390 aa, and to Rhizobium loti probable lipopolysaccharide modification acyltransferase mlr0739 SWALL:Q98M44 (EMBL:AP002995) (375 aa) fasta scores: E(): 3.7e-48, 39.84% id in 374 aa; hypothetical protein 2304829..2306013 Burkholderia pseudomallei K96243 3091646 YP_108536.1 CDS BPSL1937 NC_006350.1 2306519 2308639 D Low similarities to database matches. C-terminal region similar to Pseudomonas aeruginosa hypothetical protein pa0349 SWALL:Q9I6E4 (EMBL:AE004472) (346 aa) fasta scores: E(): 4.1e-30, 33.97% id in 362 aa, and N-terminal region to Pseudomonas aeruginosa hypothetical protein pa0348 SWALL:Q9I6E5 (EMBL:AE004472) (364 aa) fasta scores: E(): 1.1e-22, 28.77% id in 344 aa; hypothetical protein 2306519..2308639 Burkholderia pseudomallei K96243 3091894 YP_108537.1 CDS BPSL1938 NC_006350.1 2308761 2309165 R Similar to Ralstonia solanacearum transcription regulator protein rsc1584 or rs03946 SWALL:Q8XZ22 (EMBL:AL646065) (146 aa) fasta scores: E(): 1e-31, 68.84% id in 138 aa, and to Xanthomonas axonopodis hypothetical protein xac2587 SWALL:AAM37436 (EMBL:AE011899) (118 aa) fasta scores: E(): 2.3e-23, 63.71% id in 113 aa; transcriptional regulator complement(2308761..2309165) Burkholderia pseudomallei K96243 3091895 YP_108538.1 CDS ihfA NC_006350.1 2309224 2309571 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(2309224..2309571) Burkholderia pseudomallei K96243 3092200 YP_108539.1 CDS pheT NC_006350.1 2309701 2312133 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(2309701..2312133) Burkholderia pseudomallei K96243 3091565 YP_108540.2 CDS pheS NC_006350.1 2312221 2313243 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2312221..2313243) Burkholderia pseudomallei K96243 3092764 YP_108541.1 CDS rplT NC_006350.1 2313383 2313742 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(2313383..2313742) Burkholderia pseudomallei K96243 3093771 YP_108542.1 CDS rpmI NC_006350.1 2313773 2313970 R Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi 50S ribosomal protein L35 RpmI or b1717 or z2746 or ecs2424 or stm1335 or sty1776 SWALL:RL35_ECOLI (SWALL:P07085) (64 aa) fasta scores: E(): 1.1e-07, 53.12% id in 64 aa, and to Ralstonia solanacearum 50S ribosomal protein L35 rsc1579 or rs03941 SWALL:RL35_RALSO (SWALL:Q8XZ27) (65 aa) fasta scores: E(): 9.7e-21, 78.46% id in 65 aa; 50S ribosomal protein L35 complement(2313773..2313970) Burkholderia pseudomallei K96243 3092639 YP_108543.1 CDS infC NC_006350.1 2314163 >2314699 R Similar to Escherichia coli, and Escherichia coli O157:H7 translation initiation factor IF-3 InfC or Fit or b1718 or z2747 or ecs2425 SWALL:IF3_ECOLI (SWALL:P02999) (180 aa) fasta scores: E(): 5.5e-41, 69.64% id in 168 aa, and to Ralstonia solanacearum translation initiation factor IF-3 InfC or rsc1578 or rs05788 SWALL:IF3_RALSO (SWALL:Q8XZ28) (178 aa) fasta scores: E(): 3.4e-51, 80.89% id in 178 aa. Note: The initiation codon does not transcribe for a M/V nor for a L; translation initiation factor IF-3 complement(2314163..>2314699) Burkholderia pseudomallei K96243 3091790 YP_108544.1 CDS thrS NC_006350.1 2314737 2316644 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2314737..2316644) Burkholderia pseudomallei K96243 3092747 YP_108545.1 CDS relA NC_006350.1 2317104 2319341 R Similar to Escherichia coli, and Escherichia coli O157:H7 GTP pyrophosphokinase RelA or b2784 or z4099 or ecs3644 SWALL:RELA_ECOLI (SWALL:P11585) (744 aa) fasta scores: E(): 2.2e-60, 40.99% id in 705 aa, and to Ralstonia solanacearum probable GTP pyrophosphokinase rsc1576 or rs05786 SWALL:Q8XZ30 (EMBL:AL646065) (746 aa) fasta scores: E(): 1.1e-173, 67.96% id in 746 aa, and to Streptomyces coelicolor GTP pyrophosphokinase RelA or sco1513 or scl2.03C SWALL:RELA_STRCO (SWALL:P52560) (847 aa) fasta scores: E(): 1.6e-89, 39.49% id in 747 aa; GTP pyrophosphokinase complement(2317104..2319341) Burkholderia pseudomallei K96243 3092789 YP_108546.1 CDS BPSL1947 NC_006350.1 2319386 2319739 R Similar to Xanthomonas campestris hypothetical protein xcc1325 SWALL:AAM40623 (EMBL:AE012231) (115 aa) fasta scores: E(): 1.4e-23, 59.09% id in 110 aa, and to Pseudomonas aeruginosa hypothetical protein pa5303 SWALL:Q9HTQ1 (EMBL:AE004943) (117 aa) fasta scores: E(): 5e-22, 54.78% id in 115 aa; hypothetical protein complement(2319386..2319739) Burkholderia pseudomallei K96243 3094675 YP_108547.1 CDS BPSL1948 NC_006350.1 2319812 2320717 R Similar to Ralstonia solanacearum hydrolase rsc1574 or rs05784 SWALL:Q8XZ32 (EMBL:AL646065) (289 aa) fasta scores: E(): 1.5e-71, 64.45% id in 287 aa, and to Acidovorax sp. SA1 d-(-)-3-hydroxybutyrate oligomer hydrolase SWALL:Q9F1T8 (EMBL:AB044565) (291 aa) fasta scores: E(): 1.4e-26, 36.82% id in 296 aa; hydrolase complement(2319812..2320717) Burkholderia pseudomallei K96243 3094676 YP_108548.1 CDS BPSL1950 NC_006350.1 2322043 2322948 R Similar to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1065 SWALL:Q8YB36 (EMBL:AE009739) (325 aa) fasta scores: E(): 5e-45, 47.4% id in 289 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu0664 or agr_c_1186 SWALL:Q8UHL6 (EMBL:AE009035) (299 aa) fasta scores: E(): 3.6e-40, 42.61% id in 298 aa; LysR family transcriptional regulator complement(2322043..2322948) Burkholderia pseudomallei K96243 3092824 YP_108549.1 CDS BPSL1951 NC_006350.1 2323136 2323693 D hypothetical protein 2323136..2323693 Burkholderia pseudomallei K96243 3094629 YP_108550.1 CDS BPSL1952 NC_006350.1 2323708 2324808 D Similar to Synechocystis sp. hypothetical protein sll1306 SWALL:P73597 (EMBL:D90907) (335 aa) fasta scores: E(): 1.2e-45, 47.55% id in 307 aa, and to Brucella melitensis chitooligosaccharide deacetylase bmei1577 SWALL:Q8YFE5 (EMBL:AE009593) (475 aa) fasta scores: E(): 8.8e-16, 30.32% id in 277 aa; polysaccharide deacetylase 2323708..2324808 Burkholderia pseudomallei K96243 3094630 YP_108551.1 CDS BPSL1953 NC_006350.1 2324852 2325574 D Similar to Rhizobium loti probable acyl-carrier protein reductase mlr2047 SWALL:Q98J89 (EMBL:AP002998) (242 aa) fasta scores: E(): 4.3e-28, 42.85% id in 238 aa, and to Streptomyces coelicolor oxidoreductase sco1831 or sci8.16 SWALL:Q9RJ37 (EMBL:AL132644) (251 aa) fasta scores: E(): 7.2e-15, 36.14% id in 249 aa; short chain dehydrogenase 2324852..2325574 Burkholderia pseudomallei K96243 3094631 YP_108552.1 CDS scoB NC_006350.1 2325970 2326611 R Similar to Helicobacter pylori succinyl-CoA:3-ketoacid-coenzyme A transferase subunit C ScoB or hp0692 SWALL:SCOB_HELPY (SWALL:P56007) (207 aa) fasta scores: E(): 3.2e-47, 63.41% id in 205 aa, and to Xanthomonas campestris succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B LpsJ or WxcJ or xcc0628 SWALL:SCOB_XANCP (SWALL:O34263) (213 aa) fasta scores: E(): 9.1e-60, 77.51% id in 209 aa; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B complement(2325970..2326611) Burkholderia pseudomallei K96243 3093133 YP_108553.1 CDS scoA NC_006350.1 2326613 2327317 R Similar to Helicobacter pylori succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A ScoA or hp0691 SWALL:SCOA_HELPY (SWALL:P56006) (232 aa) fasta scores: E(): 6.8e-52, 60.17% id in 231 aa, and to Xanthomonas campestris succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A LpsI or WxcI or xcc0627 SWALL:SCOA_XANCP (SWALL:O34264) (242 aa) fasta scores: E(): 8.2e-73, 80.6% id in 232 aa; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A complement(2326613..2327317) Burkholderia pseudomallei K96243 3093698 YP_108554.1 CDS BPSL1956 NC_006350.1 2327570 2328115 D Similar to Ralstonia solanacearum transcription regulator protein rsc1569 or rs05256 SWALL:Q8XZ37 (EMBL:AL646065) (181 aa) fasta scores: E(): 5.4e-49, 67.95% id in 181 aa, and to Bradyrhizobium japonicum hypothetical 22.5 kDa protein SWALL:Q93SH9 (EMBL:AJ311165) (206 aa) fasta scores: E(): 0.00023, 28.48% id in 165 aa, and high similarity to the DNA-binding domain of Escherichia coli, and Escherichia coli O157:H7 transcriptional regulatory protein UhpA or b3669 or z5159 or ecs4606 SWALL:UHPA_ECOLI (SWALL:P10940) (196 aa) fasta scores: E(): 0.0076, 42.85% id in 56 aa; LuxR family transcriptional regulator 2327570..2328115 Burkholderia pseudomallei K96243 3094632 YP_108555.1 CDS BPSL1957 NC_006350.1 2328707 2330239 D lipoprotein 2328707..2330239 Burkholderia pseudomallei K96243 3091858 YP_108556.1 CDS BPSL1958 NC_006350.1 2331168 2332241 D No significant database matches. Note: Contains the following variable repeat throughout the full length of the CDS: 6x[AASNQFGIPNQTDVFAVXXS/NGA/SLXVA/SWVVSAXXWNGPXXIXXAGXFPA/ S XAXV]; hypothetical protein 2331168..2332241 Burkholderia pseudomallei K96243 3091859 YP_108557.1 CDS BPSL1959 NC_006350.1 2332619 2333050 R Similar to Pseudomonas aeruginosa hypothetical protein Pa2801 pa2801 SWALL:Q9I042 (EMBL:AE004707) (134 aa) fasta scores: E(): 1.2e-18, 41.79% id in 134 aa, and to Xanthomonas campestris hypothetical protein Xcc1147 xcc1147 SWALL:AAM40446 (EMBL:AE012213) (134 aa) fasta scores: E(): 1.6e-12, 35.6% id in 132 aa; thioesterase complement(2332619..2333050) Burkholderia pseudomallei K96243 3094595 YP_108558.1 CDS BPSL1960 NC_006350.1 2333095 2333874 R Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SWALL:GNO_GLUOX (SWALL:P50199) (256 aa) fasta scores: E(): 3.4e-24, 36.9% id in 252 aa, and to Rhodobacter sphaeroides sorbitol dehydrogenase PolS or SmoS SWALL:DHSO_RHOSH (SWALL:Q59787) (256 aa) fasta scores: E(): 6.8e-24, 36.78% id in 261 aa; short chain dehydrogenase complement(2333095..2333874) Burkholderia pseudomallei K96243 3094596 YP_108559.1 CDS BPSL1961 NC_006350.1 2334055 2335728 D Similar to Acinetobacter calcoaceticus probable electron transfer flavoprotein-ubiquinone oxidoreductase SWALL:ETFD_ACICA (SWALL:P94132) (570 aa) fasta scores: E(): 1.6e-93, 61.97% id in 568 aa, and to Ralstonia solanacearum probable electron transfer flavoprotein-ubiquinone oxidoreductase rsc1567 or rs05254 SWALL:Q8XZ39 (EMBL:AL646065) (562 aa) fasta scores: E(): 4.8e-157, 69.75% id in 562 aa; electron transport protein 2334055..2335728 Burkholderia pseudomallei K96243 3094771 YP_108560.1 CDS aroC NC_006350.1 2335915 2337024 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(2335915..2337024) Burkholderia pseudomallei K96243 3092463 YP_108561.1 CDS BPSL1963 NC_006350.1 2337389 2339323 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1564 or rs05251 SWALL:Q8XZ42 (EMBL:AL646065) (635 aa) fasta scores: E(): 1.2e-164, 65.45% id in 634 aa, and to Neisseria meningitidis transporter nmb1515 SWALL:Q9JYM2 (EMBL:AE002501) (436 aa) fasta scores: E(): 2.8e-58, 40.32% id in 429 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein complement(2337389..2339323) Burkholderia pseudomallei K96243 3094772 YP_108562.1 CDS BPSL1964 NC_006350.1 2339423 2339887 R Similar to Ralstonia solanacearum hypothetical protein rsc1563 or rs05250 SWALL:Q8XZ43 (EMBL:AL646065) (151 aa) fasta scores: E(): 6.6e-39, 70.66% id in 150 aa, and to Rhizobium loti hypothetical protein mlr0188 SWALL:Q98ND5 (EMBL:AP002994) (143 aa) fasta scores: E(): 1.1e-09, 33.33% id in 141 aa; hypothetical protein complement(2339423..2339887) Burkholderia pseudomallei K96243 3094295 YP_108563.1 CDS BPSL1965 NC_006350.1 2340104 2340424 D Similar to Ralstonia solanacearum transmembrane protein rsc1560 or rs05247 SWALL:Q8XZ46 (EMBL:AL646065) (105 aa) fasta scores: E(): 3e-25, 67% id in 100 aa, and to Caulobacter crescentus hypothetical protein cc3163 SWALL:Q9A3N9 (EMBL:AE005980) (208 aa) fasta scores: E(): 2.8e-18, 57.44% id in 94 aa; hypothetical protein 2340104..2340424 Burkholderia pseudomallei K96243 3094296 YP_108564.1 CDS BPSL1966 NC_006350.1 2340641 2341945 R N-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 tRNA processing exoribonuclease BN Rbn or b3886 or z5425 or ecs4809 SWALL:RBN_ECOLI (SWALL:P32146) (290 aa) fasta scores: E(): 9.6e-33, 40.07% id in 257 aa and full length to Ralstonia solanacearum tRNA processing exoribonuclease BN transmembrane protein rsc1559 or rs05246 SWALL:Q8XZ47 (EMBL:AL646065) (441 aa) fasta scores: E(): 6.2e-63, 45.34% id in 430 aa; tRNA processing exoribonuclease complement(2340641..2341945) Burkholderia pseudomallei K96243 3094823 YP_108565.1 CDS BPSL1967 NC_006350.1 2342060 2342668 D Similar to Escherichia coli flavoprotein (Trp repressor binding protein) WrbA or b1004 SWALL:WRBA_ECOLI (SWALL:P30849) (197 aa) fasta scores: E(): 5.2e-19, 40.3% id in 196 aa, and to Ralstonia solanacearum probable Trp repressor binding protein rsc1558 or rs05245 SWALL:Q8XZ48 (EMBL:AL646065) (201 aa) fasta scores: E(): 3.9e-54, 72.86% id in 199 aa; Trp repressor binding protein 2342060..2342668 Burkholderia pseudomallei K96243 3094824 YP_108566.1 CDS BPSL1968 NC_006350.1 2342665 2343114 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1557 or rs05244 SWALL:Q8XZ49 (EMBL:AL646065) (129 aa) fasta scores: E(): 5.4e-20, 54.76% id in 126 aa, and to Neisseria meningitidis hypothetical protein nma0801 SWALL:Q9JVK4 (EMBL:AL162754) (117 aa) fasta scores: E(): 2.4e-12, 44.54% id in 110 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 2342665..2343114 Burkholderia pseudomallei K96243 3093100 YP_108567.1 CDS BPSL1969 NC_006350.1 2343149 2344570 D Similar to Ralstonia solanacearum probable oxidoreductase rsc1556 or rs05243 SWALL:Q8XZ50 (EMBL:AL646065) (470 aa) fasta scores: E(): 1.1e-123, 71.73% id in 467 aa, and to Rhizobium loti oxidoreductase mlr7440 SWALL:Q986B0 (EMBL:AP003011) (476 aa) fasta scores: E(): 1.7e-87, 52.24% id in 467 aa; FAD-binding reductase 2343149..2344570 Burkholderia pseudomallei K96243 3093101 YP_108568.1 CDS BPSL1970 NC_006350.1 2344602 2345573 D Similar to Pseudomonas aeruginosa hypothetical protein pa0544 SWALL:Q9I5Z2 (EMBL:AE004490) (247 aa) fasta scores: E(): 1.9e-09, 36.27% id in 317 aa. Note: the central region of BPSL1970 does not present any similarities in the databases; calcineurin-like phosphoesterase 2344602..2345573 Burkholderia pseudomallei K96243 3093267 YP_108569.1 CDS BPSL1971 NC_006350.1 2345922 2346863 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3895 SWALL:Q9HXB8 (EMBL:AE004807) (317 aa) fasta scores: E(): 7.9e-76, 63.39% id in 306 aa, and to Klebsiella pneumoniae probable transcriptional regulator LtrA SWALL:LTRA_KLEPN (SWALL:P52689) (309 aa) fasta scores: E(): 3.1e-29, 32.67% id in 303 aa; LysR family transcriptional regulator complement(2345922..2346863) Burkholderia pseudomallei K96243 3093268 YP_108570.1 CDS BPSL1972 NC_006350.1 2347021 2348973 D Similar to Burkholderia cepacia fusaric acid resistance protein precursor FusA SWALL:FUSA_BURCE (SWALL:P24126) (530 aa) fasta scores: E(): 5.8e-82, 62.82% id in 538 aa, and to Pseudomonas aeruginosa outer membrane protein OprM precursor or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 1.2e-19, 28.84% id in 475 aa. Note: Contains a highly conserved repeat at the C-terminal region (from residue 496) that has no similarities to database entries; antibiotic resistance membrane protein 2347021..2348973 Burkholderia pseudomallei K96243 3092307 YP_108571.1 CDS BPSL1973 NC_006350.1 2348990 2351191 D N-terminal region similar to Burkholderia cepacia fusaric acid resistance protein FusB SWALL:FUSB_BURCE (SWALL:P24127) (142 aa) fasta scores: E(): 5.2e-11, 71.23% id in 73 aa, central region to Burkholderia cepacia fusaric acid resistance protein FusC SWALL:FUSC_BURCE (SWALL:P24128) (346 aa) fasta scores: E(): 2.5e-99, 78.77% id in 344 aa, and C-terminal region to Burkholderia cepacia fusaric acid resistance protein FusD fusD SWALL:FUSD_BURCE (SWALL:P24129) (208 aa) fasta scores: E(): 7.6e-54, 75.59% id in 209 aa. Note: Seems to be a fusion of the three CDSs from Burkholderia cepacia; antibiotic resistance protein 2348990..2351191 Burkholderia pseudomallei K96243 3092308 YP_108572.1 CDS BPSL1974 NC_006350.1 2351188 2351391 D Similar to Brucella melitensis hypothetical membrane associated protein bmeii0532 SWALL:Q8YCJ6 (EMBL:AE009689) (69 aa) fasta scores: E(): 0.00012, 40.67% id in 59 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein YhcR or stm3366 or sty3546A SWALL:Q8XEK3 (EMBL:AE008855) (67 aa) fasta scores: E(): 0.0019, 30.76% id in 52 aa; hypothetical protein 2351188..2351391 Burkholderia pseudomallei K96243 3094873 YP_108573.1 CDS BPSL1975 NC_006350.1 2351393 2352286 D Full length similar to Pseudomonas aeruginosa hypothetical protein pa3892 SWALL:Q9HXC1 (EMBL:AE004806) (302 aa) fasta scores: E(): 3.2e-74, 67.59% id in 287 aa, and to Escherichia coli multidrug resistance protein K EmrK or b2368 SWALL:EMRK_ECOLI (SWALL:P52599) (387 aa) fasta scores: E(): 4.6e-09, 28.35% id in 335 aa, and C-terminal region to Burkholderia cepacia fusaric acid resistance protein FusE SWALL:FUSE_BURCE (SWALL:P24130) (168 aa) fasta scores: E(): 7.1e-46, 81.65% id in 169 aa; antibiotic resistance protein 2351393..2352286 Burkholderia pseudomallei K96243 3094874 YP_108574.1 CDS BPSL1976 NC_006350.1 2352657 2354333 R Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 3.5e-50, 41.28% id in 528 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc2799 or rs05622 SWALL:Q8XVN1 (EMBL:AL646071) (515 aa) fasta scores: E(): 4.2e-61, 47.82% id in 529 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; chemotaxis methyl-accepting membrane protein complement(2352657..2354333) Burkholderia pseudomallei K96243 3092697 YP_108575.1 CDS fsr NC_006350.1 2354685 2355935 D Similar to Escherichia coli fosmidomycin resistance protein Fsr or b0479 SWALL:FSR_ECOLI (SWALL:P52067) (406 aa) fasta scores: E(): 1.1e-99, 67.48% id in 406 aa, and to Ralstonia solanacearum fosmidomycin resistance antibiotic resistance transmembrane protein Fsr or rsp0412 or rs00869 SWALL:Q8XSQ5 (EMBL:AL646078) (411 aa) fasta scores: E(): 3.8e-103, 70.85% id in 398 aa; fosmidomycin resistance protein 2354685..2355935 Burkholderia pseudomallei K96243 3093901 YP_108576.1 CDS BPSL1978 NC_006350.1 2356296 2357084 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(2356296..2357084) Burkholderia pseudomallei K96243 3092698 YP_108577.1 CDS BPSL1979 NC_006350.1 2357081 2359444 R Similar to Escherichia coli DNA helicase II UvrD or MutU or PdeB or Rad or RecL or b3813 SWALL:UVRD_ECOLI (SWALL:P03018) (720 aa) fasta scores: E(): 8.9e-94, 45.2% id in 792 aa, and to Ralstonia solanacearum probable DNA helicase II protein rsc2235 or rs01364 SWALL:Q8XX81 (EMBL:AL646069) (829 aa) fasta scores: E(): 4.8e-211, 68.44% id in 805 aa; helicase complement(2357081..2359444) Burkholderia pseudomallei K96243 3094437 YP_108578.1 CDS valS NC_006350.1 2359584 2362451 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2359584..2362451 Burkholderia pseudomallei K96243 3094083 YP_108579.1 CDS galU NC_006350.1 2362538 2363419 D Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri UTP--glucose-1-phosphate uridylyltransferase GalU or b1236 or z2012 or ecs1738 SWALL:GALU_ECOLI (SWALL:P25520) (301 aa) fasta scores: E(): 5.6e-51, 54.82% id in 290 aa, and to Burkholderia pseudomallei UTP-glucose-1-phosphate uridylyltransferase SWALL:Q9F5N4 (EMBL:AF312223) (295 aa) fasta scores: E(): 2.7e-92, 83.91% id in 286 aa; UTP-glucose-1-phosphate uridylyltransferase 2362538..2363419 Burkholderia pseudomallei K96243 3092713 YP_108580.1 CDS BPSL1982 NC_006350.1 2363480 2364097 R Low similarity to Ralstonia solanacearum probable lipoprotein transmembrane rsc2124 or rs01480 SWALL:Q8XXI9 (EMBL:AL646068) (213 aa) fasta scores: E(): 0.00015, 31.94% id in 216 aa; lipoprotein complement(2363480..2364097) Burkholderia pseudomallei K96243 3094438 YP_108581.1 CDS BPSL1983 NC_006350.1 2364186 2366579 R Similar to Pseudomonas aeruginosa probable two-component sensor pa4036 SWALL:Q9HWZ1 (EMBL:AE004820) (766 aa) fasta scores: E(): 1.4e-49, 39.2% id in 806 aa, and to Caulobacter crescentus sensory box histidine kinase, cc3327 SWALL:Q9A377 (EMBL:AE005994) (761 aa) fasta scores: E(): 1.3e-22, 35.7% id in 801 aa; two component system histidine kinase complement(2364186..2366579) Burkholderia pseudomallei K96243 3094759 YP_108582.1 CDS BPSL1984 NC_006350.1 2366590 2367936 R Similar to Caulobacter crescentus peptidoglycan binding domain protein cc3326 SWALL:Q9A378 (EMBL:AE005994) (457 aa) fasta scores: E(): 9.1e-42, 36.19% id in 442 aa, and to Ralstonia solanacearum probable signal peptide protein rsc1074 or rs04113 SWALL:Q8Y0H0 (EMBL:AL646062) (568 aa) fasta scores: E(): 1.1e-24, 30.58% id in 425 aa; hypothetical protein complement(2366590..2367936) Burkholderia pseudomallei K96243 3094760 YP_108583.1 CDS BPSL1985 NC_006350.1 2367951 2368679 R Similar to Caulobacter crescentus DNA-binding response regulator cc3325 SWALL:Q9A379 (EMBL:AE005994) (236 aa) fasta scores: E(): 1.3e-36, 43.36% id in 226 aa, and to Rhizobium meliloti phosphate regulon transcriptional regulatory protein PhoB or r00515 or smc02140 SWALL:PHOB_RHIME (SWALL:Q52990) (227 aa) fasta scores: E(): 2.8e-20, 34.66% id in 225 aa; two component system response regulator complement(2367951..2368679) Burkholderia pseudomallei K96243 3094683 YP_108584.1 CDS BPSL1986 NC_006350.1 2368983 2369369 R hypothetical protein complement(2368983..2369369) Burkholderia pseudomallei K96243 3094684 YP_108585.1 CDS BPSL1987 NC_006350.1 2369645 2369875 R Similar to Escherichia coli, and Escherichia coli O157:H7 SirA protein or b3470 or z4844 or ecs4319 SWALL:SIRA_ECOLI (SWALL:P37618) (81 aa) fasta scores: E(): 0.00021, 31.88% id in 69 aa, and to Ralstonia solanacearum hypothetical protein rsc0810 or rs05012 SWALL:Q8Y180 (EMBL:AL646061) (75 aa) fasta scores: E(): 3e-20, 73.68% id in 76 aa; hypothetical protein complement(2369645..2369875) Burkholderia pseudomallei K96243 3093642 YP_108586.1 CDS BPSL1988 NC_006350.1 2370040 2371077 R Similar to Clostridium perfringens probable dehydrogenase cpe0093 SWALL:Q8XP72 (EMBL:AP003185) (349 aa) fasta scores: E(): 5.5e-46, 39.05% id in 338 aa, and to Rhizobium meliloti myo-inositol 2-dehydrogenase IdhA or rb1194 or smb20899 SWALL:MI2D_RHIME (SWALL:O68965) (330 aa) fasta scores: E(): 2.5e-27, 34.21% id in 342 aa. Note: Also similar to the upstream CDS, BPSL1989 (344 aa) fasta scores: E(): 7.2e-29, 35.362% identity in 345 aa overlap; oxidoreductase complement(2370040..2371077) Burkholderia pseudomallei K96243 3093643 YP_108587.1 CDS BPSL1989 NC_006350.1 2371090 2372109 R Similar to Caulobacter crescentus myo-inositol 2-dehydrogenase cc1296 SWALL:Q9A8Q7 (EMBL:AE005804) (328 aa) fasta scores: E(): 2.1e-58, 49.54% id in 327 aa, and to Rhizobium meliloti myo-inositol 2-dehydrogenase IdhA or rb1194 or smb20899 SWALL:MI2D_RHIME (SWALL:O68965) (330 aa) fasta scores: E(): 1.1e-51, 46.64% id in 328 aa. Note: Also similar to the downstream CDS, BPSL1988 (346 aa) fasta scores: E(): 4.5e-27, 35.362% identity in 345 aa overlap; oxidoreductase complement(2371090..2372109) Burkholderia pseudomallei K96243 3093644 YP_108588.1 CDS BPSL1990 NC_006350.1 2372102 2372983 R Similar to Ralstonia solanacearum hypothetical protein rsc1249 or rs02757 SWALL:Q8XZZ6 (EMBL:AL646063) (302 aa) fasta scores: E(): 1.1e-44, 47.2% id in 286 aa, and to Caulobacter crescentus sis domain protein cc1297 SWALL:Q9A8Q6 (EMBL:AE005804) (291 aa) fasta scores: E(): 1e-32, 35.88% id in 287 aa; transcriptional regulatory protein complement(2372102..2372983) Burkholderia pseudomallei K96243 3093645 YP_108589.1 CDS BPSL1991 NC_006350.1 2373228 2374277 D Similar to Rhizobium loti probable secreted solute binding protein mll1004 SWALL:Q98LI9 (EMBL:AP002996) (316 aa) fasta scores: E(): 5.6e-29, 32.74% id in 342 aa, and to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB or b3751 SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 3.8e-07, 24.81% id in 270 aa; sugar ABC transporter substrate-binding periplasmic protein 2373228..2374277 Burkholderia pseudomallei K96243 3093898 YP_108590.1 CDS BPSL1992 NC_006350.1 2374378 2375523 D Similar to Rhizobium loti permease of sugar ABC transporter mll1003 SWALL:Q98LJ0 (EMBL:AP002996) (373 aa) fasta scores: E(): 1e-65, 52.86% id in 367 aa, and to Brucella melitensis sugar transport system permease bmei0664 SWALL:Q8YHY1 (EMBL:AE009508) (387 aa) fasta scores: E(): 5.9e-64, 52.39% id in 376 aa; sugar ABC transporter membrane protein 2374378..2375523 Burkholderia pseudomallei K96243 3093899 YP_108591.1 CDS BPSL1993 NC_006350.1 2375536 2376336 D Similar to Brucella melitensis sugar transport ATP-binding protein bmei0665 SWALL:Q8YHY0 (EMBL:AE009508) (259 aa) fasta scores: E(): 1.3e-50, 58.55% id in 263 aa, and to Rhizobium loti ATP-binding protein of sugar ABC transporter mlr2442 SWALL:Q98IE2 (EMBL:AP002999) (264 aa) fasta scores: E(): 6.2e-50, 63.05% id in 249 aa; ABC transporter ATP-binding protein 2375536..2376336 Burkholderia pseudomallei K96243 3092150 YP_108592.1 CDS BPSL1994 NC_006350.1 2376350 2378350 D Similar to Ralstonia solanacearum probable transferase kinase rsc1240 or rs02748 SWALL:Q8Y005 (EMBL:AL646063) (650 aa) fasta scores: E(): 3.1e-139, 57.25% id in 655 aa, and N-trminal region to Bacillus subtilis protein IolC or e83c SWALL:IOLC_BACSU (SWALL:P42414) (325 aa) fasta scores: E(): 2.1e-17, 28.57% id in 343 aa; carbohydrate kinase 2376350..2378350 Burkholderia pseudomallei K96243 3092151 YP_108593.1 CDS BPSL1995 NC_006350.1 2378361 2380346 D Similar to Ralstonia solanacearum acetolactate synthase rsc1239 or rs02747 SWALL:Q8Y006 (EMBL:AL646063) (627 aa) fasta scores: E(): 4e-135, 62.88% id in 625 aa, and to Bacillus subtilis probable malonic semialdehyde oxidative decarboxylase IolD or e83d SWALL:IOLD_BACSU (SWALL:P42415) (580 aa) fasta scores: E(): 3.4e-43, 40.82% id in 583 aa, and to Spirulina platensis acetolactate synthase IlvY SWALL:ILVB_SPIPL (SWALL:P27868) (579 aa) fasta scores: E(): 3.1e-22, 28.51% id in 540 aa; TPP-binding acetolactate synthase 2378361..2380346 Burkholderia pseudomallei K96243 3092053 YP_108594.1 CDS BPSL1996 NC_006350.1 2380343 2381263 D Similar to Yersinia pestis hypothetical protein ypo2586 SWALL:Q8ZDI2 (EMBL:AJ414152) (306 aa) fasta scores: E(): 3e-62, 56.94% id in 288 aa, and to Rhizobium meliloti rhizopine catabolism protein MocC SWALL:MOCC_RHIME (SWALL:P49304) (325 aa) fasta scores: E(): 1.1e-54, 50.85% id in 291 aa; amine catabolism-like protein 2380343..2381263 Burkholderia pseudomallei K96243 3092054 YP_108595.1 CDS BPSL1997 NC_006350.1 2381263 2382066 D Similar to Ralstonia solanacearum myo-inositol catabolism protein rsc1237 or rs02745 SWALL:Q8Y008 (EMBL:AL646063) (271 aa) fasta scores: E(): 1.6e-60, 60.83% id in 263 aa, and to Bacillus subtilis protein IolB or e83b SWALL:IOLB_BACSU (SWALL:P42413) (271 aa) fasta scores: E(): 2.3e-41, 46.61% id in 251 aa; hypothetical protein 2381263..2382066 Burkholderia pseudomallei K96243 3093299 YP_108596.1 CDS BPSL1998 NC_006350.1 2382183 2382887 R Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 2.1e-19, 36.36% id in 220 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport ATP-binding protein bmeii0065 SWALL:Q8YDV9 (EMBL:AE009645) (238 aa) fasta scores: E(): 3.4e-28, 45.29% id in 234 aa; branched amino acid transport system protein complement(2382183..2382887) Burkholderia pseudomallei K96243 3093300 YP_108597.1 CDS BPSL1999 NC_006350.1 2382884 2385214 R N-terminal region similar to Ralstonia solanacearum probable amino acid transport system permease lipoprotein transmembrane rsc1752 or rs02940 SWALL:Q8XYK6 (EMBL:AL646066) (440 aa) fasta scores: E(): 1.9e-34, 46.79% id in 421 aa, and C-terminal region similar to Ralstonia solanacearum probable amino-acid ATP-binding ABC transporter protein rsc1753 or rs02941 SWALL:Q8XYK5 (EMBL:AL646066) (266 aa) fasta scores: E(): 8.2e-34, 53.57% id in 252 aa, and to Escherichia coli, and Escherichia coli O157:H7 high-affinity branched-chain amino acid transport ATP-binding protein LivG or b3455 or z4825 or ecs4302 SWALL:LIVG_ECOLI (SWALL:P22730) (255 aa) fasta scores: E(): 5.2e-16, 36.29% id in 259 aa. Note: This CDS appears to be a funsion of a membrane transport related protein and an ATP-binding transport related protein; branched amino acid related transport system, bifunctional protein (membrane and ATP-binding) complement(2382884..2385214) Burkholderia pseudomallei K96243 3094719 YP_108598.1 CDS BPSL2000 NC_006350.1 2385207 2386142 R Similar to Ralstonia solanacearum amino acid transmembrane transmembrane protein rsc1751 or rs02939 SWALL:Q8XYK7 (EMBL:AL646066) (315 aa) fasta scores: E(): 1.4e-58, 58.59% id in 314 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport system permease bmeii0068 SWALL:Q8YDV6 (EMBL:AE009645) (332 aa) fasta scores: E(): 9e-42, 44.79% id in 317 aa; branched amino acid transport system, membrane protein complement(2385207..2386142) Burkholderia pseudomallei K96243 3094720 YP_108599.1 CDS BPSL2001 NC_006350.1 2386147 2386596 R Similar to Pseudomonas aeruginosa hypothetical protein pa5185 SWALL:Q9HU04 (EMBL:AE004931) (147 aa) fasta scores: E(): 1.6e-34, 60.95% id in 146 aa, and to Mycobacterium tuberculosis hypothetical protein rv0163 or mt0172 or mtci28.03 SWALL:O07408 (EMBL:Z97050) (151 aa) fasta scores: E(): 4.2e-22, 45.32% id in 139 aa; thioesterase complement(2386147..2386596) Burkholderia pseudomallei K96243 3091833 YP_108600.1 CDS BPSL2002 NC_006350.1 2386847 2387995 R Similar to Citrobacter freundii 1,3-propanediol dehydrogenase DhaT SWALL:DHAT_CITFR (SWALL:P45513) (387 aa) fasta scores: E(): 5.4e-34, 36.79% id in 375 aa, to Bacillus subtilis alcohol dehydrogenase GbsB SWALL:GBSB_BACSU (SWALL:P71017) (402 aa) fasta scores: E(): 1e-28, 33.42% id in 371 aa, and to Ralstonia solanacearum probable NAD-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase rsc1771 or rs02958 SWALL:Q8XYI7 (EMBL:AL646066) (382 aa) fasta scores: E(): 5.7e-117, 80.89% id in 382 aa; iron-containing alcohol dehydrogenase complement(2386847..2387995) Burkholderia pseudomallei K96243 3091834 YP_108601.1 CDS BPSL2003 NC_006350.1 2388211 2388546 D Similar to Sulfolobus tokodaii hypothetical protein st1080 SWALL:Q972Q3 (EMBL:AP000984) (114 aa) fasta scores: E(): 1.5e-14, 44.76% id in 105 aa, and to Thermotoga maritima hypothetical protein tm0763 SWALL:Y763_THEMA (SWALL:Q9WZM2) (106 aa) fasta scores: E(): 4.3e-13, 44.55% id in 101 aa; hypothetical protein 2388211..2388546 Burkholderia pseudomallei K96243 3094867 YP_108602.1 CDS BPSL2004 NC_006350.1 2388646 2389275 R Similar to Ralstonia solanacearum hypothetical protein rsc0809 or rs05013 SWALL:Q8Y181 (EMBL:AL646061) (193 aa) fasta scores: E(): 3.4e-45, 64.24% id in 179 aa, and to Pseudomonas aeruginosa NADH pyrophosphatase NudC or pa1823 SWALL:NUDC_PSEAE (SWALL:O86062) (278 aa) fasta scores: E(): 2.1e-05, 27.1% id in 166 aa; phosphatase complement(2388646..2389275) Burkholderia pseudomallei K96243 3094868 YP_108603.1 CDS BPSL2005 NC_006350.1 2389489 2390166 D hypothetical protein 2389489..2390166 Burkholderia pseudomallei K96243 3091940 YP_108604.1 CDS BPSL2006 NC_006350.1 2390396 2391952 R Similar to Ralstonia solanacearum probable protease signal peptide protein rsp1552 or rs02108 SWALL:Q8XPT5 (EMBL:AL646085) (490 aa) fasta scores: E(): 2.9e-37, 45.17% id in 518 aa, and to Pseudomonas aeruginosa serine protease MucD or pa0766 SWALL:Q57155 (EMBL:U49151) (474 aa) fasta scores: E(): 4.1e-25, 38.26% id in 473 aa; hypothetical protein complement(2390396..2391952) Burkholderia pseudomallei K96243 3091941 YP_108605.1 CDS BPSL2007 NC_006350.1 2392284 2393978 R Similar to Ralstonia solanacearum hypothetical protein rsc0805 or rs05564 SWALL:Q8Y185 (EMBL:AL646061) (409 aa) fasta scores: E(): 1.3e-25, 38.04% id in 552 aa, and to Pseudomonas aeruginosa hypothetical protein pa1412 SWALL:Q9I3T2 (EMBL:AE004570) (397 aa) fasta scores: E(): 2.8e-11, 30.25% id in 542 aa. Note: The similarities annotated comprise the N-terminal and the C-terminal region of this CDS and the database matches, leaving the central part, where the repeats are, with no similarities to any of the database matches; hypothetical protein complement(2392284..2393978) Burkholderia pseudomallei K96243 3093972 YP_108606.1 CDS BPSL2008 NC_006350.1 2394125 2395090 D Similar to Bacillus subtilis transcriptional regulatory protein GltR SWALL:GLTR_BACSU (SWALL:P94501) (296 aa) fasta scores: E(): 1.6e-32, 37.93% id in 290 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0804 or rs05024 SWALL:Q8Y186 (EMBL:AL646061) (302 aa) fasta scores: E(): 3.4e-55, 56.16% id in 292 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; LysR family transcriptional regulator 2394125..2395090 Burkholderia pseudomallei K96243 3093973 YP_108607.1 CDS alaS NC_006350.1 2395633 2398257 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2395633..2398257) Burkholderia pseudomallei K96243 3094503 YP_108608.1 CDS BPSL2010 NC_006350.1 2398792 2400012 D Similar to Ralstonia solanacearum transmembrane protein rsc0796 or rs05041 SWALL:Q8Y194 (EMBL:AL646061) (420 aa) fasta scores: E(): 7.9e-124, 76.1% id in 406 aa, and to Pseudomonas aeruginosa hypothetical protein pa0446 SWALL:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 8e-103, 64.44% id in 405 aa; lipid metabolism-like protein 2398792..2400012 Burkholderia pseudomallei K96243 3093635 YP_108609.1 CDS BPSL2011 NC_006350.1 2400341 2400547 R Similar to Escherichia coli, and Escherichia coli O157:H7 osmotically inducible lipoprotein B precursor OsmB or b1283 or z2523 or ecs1856 SWALL:OSMB_ECOLI (SWALL:P17873) (72 aa) fasta scores: E(): 0.0073, 45.9% id in 61 aa, and to Ralstonia solanacearum osmotically inducible lipoprotein transmembrane rsc1973 or rs03547 SWALL:Q8XXZ0 (EMBL:AL646067) (66 aa) fasta scores: E(): 0.00021, 51.85% id in 54 aa; osmosis-related lipoprotein complement(2400341..2400547) Burkholderia pseudomallei K96243 3093636 YP_108610.1 CDS glnS NC_006350.1 2400830 2402539 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2400830..2402539 Burkholderia pseudomallei K96243 3091627 YP_108611.1 CDS BPSL2013 NC_006350.1 2402897 2403370 R Similar to Ralstonia solanacearum hypothetical protein rsc0747 or rs05106 SWALL:Q8Y1E3 (EMBL:AL646060) (153 aa) fasta scores: E(): 1.7e-30, 57.71% id in 149 aa, and to Bacteriophage T4 hypothetical 17.7 kDa protein in e-segB intergenic region Y06l or E.1 or Msp8 SWALL:Y06L_BPT4 (SWALL:P32271) (151 aa) fasta scores: E(): 1.2e-10, 41.12% id in 124 aa; NUDIX family hydrolase complement(2402897..2403370) Burkholderia pseudomallei K96243 3094195 YP_108612.1 CDS BPSL2014 NC_006350.1 2403398 2403784 R hypothetical protein complement(2403398..2403784) Burkholderia pseudomallei K96243 3094196 YP_108613.1 CDS BPSL2015 NC_006350.1 2404072 2406120 R Similar to Alteromonas sp. beta-hexosaminidase A precursor Cht60 SWALL:HEXA_ALTSO (SWALL:P48823) (598 aa) fasta scores: E(): 2.1e-59, 35.98% id in 628 aa, and to Ralstonia solanacearum hydrolase glycosidase rsc0769 or rs05085 SWALL:Q8Y1C1 (EMBL:AL646060) (734 aa) fasta scores: E(): 3.1e-152, 61.84% id in 684 aa; membrane attached glycosyl hydrolase complement(2404072..2406120) Burkholderia pseudomallei K96243 3091655 YP_108614.1 CDS BPSL2016 NC_006350.1 2406423 2407133 D hypothetical protein 2406423..2407133 Burkholderia pseudomallei K96243 3091656 YP_108615.1 CDS BPSL2017 NC_006350.1 2407186 2408571 R Similar to Methylobacterium extorquens methylamine utilization protein MauG SWALL:MAUG_METEX (SWALL:Q49128) (353 aa) fasta scores: E(): 0.051, 28.6% id in 451 aa, and to Ralstonia solanacearum probable lipoprotein transmembrane rsp1173 or rs05063 SWALL:Q8XQP8 (EMBL:AL646083) (441 aa) fasta scores: E(): 4.2e-76, 53.88% id in 451 aa. CDS is extended at the N-terminus in comparison to some orthologues; di-heme cytochrome c peroxidase complement(2407186..2408571) Burkholderia pseudomallei K96243 3094838 YP_108616.1 CDS BPSL2018 NC_006350.1 2408727 2410400 D Similar to Burkholderia pseudomallei acid phosphatase AcpA SWALL:Q9L5C5 (EMBL:AF252862) (577 aa) fasta scores: E(): 5.5e-101, 55.68% id in 537 aa, and to Ralstonia solanacearum acid phosphatase rsp1174 or rs05064 SWALL:Q8XQP7 (EMBL:AL646083) (715 aa) fasta scores: E(): 1.1e-96, 63.1% id in 515 aa; acid phosphatase 2408727..2410400 Burkholderia pseudomallei K96243 3094839 YP_108617.1 CDS BPSL2019 NC_006350.1 2410598 2411791 D enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 2410598..2411791 Burkholderia pseudomallei K96243 3091470 YP_108618.1 CDS BPSL2020 NC_006350.1 2412415 2413602 D Similar to Escherichia coli multidrug resistance protein K EmrK or b2368 SWALL:EMRK_ECOLI (SWALL:P52599) (387 aa) fasta scores: E(): 1.7e-18, 31.65% id in 357 aa, and to Rhizobium meliloti hypothetical protein rb1406 or smb20699 SWALL:Q92TT9 (EMBL:AL603647) (365 aa) fasta scores: E(): 5.4e-33, 38.71% id in 372 aa, and to Pseudomonas putida TrpB trpB SWALL:Q8RPR5 (EMBL:AF360362) (353 aa) fasta scores: E(): 3.2e-32, 38.75% id in 338 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; HlyD family secretion protein 2412415..2413602 Burkholderia pseudomallei K96243 3091471 YP_108619.1 CDS BPSL2021 NC_006350.1 2413784 2415403 D Similar to Escherichia coli, and Escherichia coli O157:H7 multidrug resistance protein B EmrB or b2686 or z3987 or ecs3548 SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 2.7e-61, 36.14% id in 509 aa, and to Chlorobium tepidum multidrug resistance protein ct0104 SWALL:AAM71352 (EMBL:AE012789) (533 aa) fasta scores: E(): 2e-66, 37.71% id in 533 aa; drug-resistance related membrane protein 2413784..2415403 Burkholderia pseudomallei K96243 3094661 YP_108620.1 CDS BPSL2022 NC_006350.1 2415534 2417114 D Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 2.9e-27, 33.87% id in 496 aa, and to Ralstonia solanacearum probable channel-forming component of a multidrug resistance efflux pump protein rsp0442 or rs00901 SWALL:Q8XSM5 (EMBL:AL646078) (495 aa) fasta scores: E(): 2.8e-39, 37.09% id in 496 aa; drug-resistance related outer-membrane protein 2415534..2417114 Burkholderia pseudomallei K96243 3094662 YP_108621.1 CDS BPSL2024 NC_006350.1 2417418 2418038 R Similar to Escherichia coli, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 3.1e-21, 37.18% id in 199 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa3714 SWALL:Q9HXS7 (EMBL:AE004790) (213 aa) fasta scores: E(): 1.3e-26, 43.12% id in 211 aa; two component regulatory system response regulator complement(2417418..2418038) Burkholderia pseudomallei K96243 3093363 YP_108622.1 CDS BPSL2025 NC_006350.1 2418051 2420132 R Similar to the C-terminal region of Escherichia coli sensor protein RcsC or b2218 SWALL:RCSC_ECOLI (SWALL:P14376) (949 aa) fasta scores: E(): 2e-37, 32.94% id in 513 aa, and of Salmonella typhi sensor protein RcsC or sty2496 SWALL:RCSC_SALTI (SWALL:Q56128) (948 aa) fasta scores: E(): 1.2e-35, 32.82% id in 521 aa; two component regulatory system sensor kinase complement(2418051..2420132) Burkholderia pseudomallei K96243 3093611 YP_108623.1 CDS BPSL2026 NC_006350.1 2420543 2421508 R Similar to Acinetobacter baumannii hypothetical secreted protein CsuE SWALL:AAP43040 (EMBL:AY241696) (339 aa) fasta scores: E(): 1e-06, 31.08% id in 341 aa; lipoprotein complement(2420543..2421508) Burkholderia pseudomallei K96243 3093612 YP_108624.1 CDS BPSL2027 NC_006350.1 2421524 2423872 R Similar to Escherichia coli outer membrane usher protein precursor FocD SWALL:FOCD_ECOLI (SWALL:P46009) (875 aa) fasta scores: E(): 3.7e-11, 23.57% id in 755 aa, and to Vibrio parahaemolyticus CsuD SWALL:Q9AG84 (EMBL:AF339087) (802 aa) fasta scores: E(): 5.1e-86, 35.48% id in 789 aa; fimbriae-like protein complement(2421524..2423872) Burkholderia pseudomallei K96243 3093013 YP_108625.1 CDS BPSL2028 NC_006350.1 2423980 2424819 R Similar to Yersinia pestis chaperone protein ypo1697 SWALL:Q8ZFK6 (EMBL:AJ414150) (250 aa) fasta scores: E(): 1.8e-33, 46.08% id in 230 aa, and to Xanthomonas campestris pili assembly chaperone EcpD or xcc1380 SWALL:AAM40678 (EMBL:AE012237) (251 aa) fasta scores: E(): 1.6e-11, 32.31% id in 263 aa; fimbriae-assembly chaperone complement(2423980..2424819) Burkholderia pseudomallei K96243 3093014 YP_108626.1 CDS BPSL2029 NC_006350.1 2424837 2425361 R Similar to Pseudomonas aeruginosa hypothetical protein pa4648 SWALL:Q9HVE4 (EMBL:AE004879) (182 aa) fasta scores: E(): 5.7e-10, 36.93% id in 176 aa, and to Vibrio parahaemolyticus CsuA SWALL:Q9AG87 (EMBL:AF339087) (181 aa) fasta scores: E(): 4.2e-07, 32.36% id in 173 aa. Note: Also similar to the upstream CDS BPSL2030 (187 aa) fasta scores: E(): 1.5e-09, 43.949% identity in 157 aa overlap; hypothetical protein complement(2424837..2425361) Burkholderia pseudomallei K96243 3093364 YP_108627.1 CDS BPSL2030 NC_006350.1 2425438 2425998 R Similar to Pseudomonas aeruginosa hypothetical protein pa4648 SWALL:Q9HVE4 (EMBL:AE004879) (182 aa) fasta scores: E(): 9.2e-10, 34.46% id in 177 aa, and to Vibrio parahaemolyticus CsuA SWALL:Q9AG87 (EMBL:AF339087) (181 aa) fasta scores: E(): 5.2e-09, 30.17% id in 169 aa. Note: Also smilar to BPSL2031 (200 aa) fasta scores: E(): 1.3e-13, 37.576% identity in 165 aa overlap and to BPSL2029 (175 aa) fasta scores: E(): 3.9e-11, 43.949% identity in 157 aa overlap; hypothetical protein complement(2425438..2425998) Burkholderia pseudomallei K96243 3093365 YP_108628.1 CDS BPSL2031 NC_006350.1 2426051 2426596 R Similar to Pseudomonas aeruginosa hypothetical protein pa4648 SWALL:Q9HVE4 (EMBL:AE004879) (182 aa) fasta scores: E(): 1.7e-07, 30.22% id in 182 aa, and to Yersinia pestis exported protein ypo1699 SWALL:Q8ZFK4 (EMBL:AJ414150) (176 aa) fasta scores: E(): 1.7e-06, 30.4% id in 171 aa. Note: Also similar to BPSL2030 (187 aa) fasta scores: E(): 6.4e-14, 37.576% identity in 165 aa overlap and to BPSL2029 (175 aa) fasta scores: E(): 2.6e-05, 34.118% identity in 170 aa overlap; hypothetical protein complement(2426051..2426596) Burkholderia pseudomallei K96243 3092962 YP_108629.1 CDS BPSL2032 NC_006350.1 2427413 2428306 R Similar to Bacillus subtilis als operon regulatory protein AlsR SWALL:ALSR_BACSU (SWALL:Q04778) (302 aa) fasta scores: E(): 1.2e-22, 31.63% id in 294 aa, and to Rhizobium meliloti transcriptional regulator protein rb0012 or smb20009 SWALL:Q92XF0 (EMBL:AL603642) (309 aa) fasta scores: E(): 3.5e-38, 44.21% id in 285 aa; LysR family transcriptional regulator complement(2427413..2428306) Burkholderia pseudomallei K96243 3092963 YP_108630.1 CDS BPSL2033 NC_006350.1 2428723 2430009 D Similar to Alcaligenes eutrophus probable 4-methylmuconolactone transporter MmlH SWALL:MMLH_ALCEU (SWALL:O51798) (428 aa) fasta scores: E(): 5.4e-40, 43.51% id in 416 aa, and to Ralstonia solanacearum probable metabolite transport transmembrane protein rsp0234 or rs05189 SWALL:Q8XT81 (EMBL:AL646077) (416 aa) fasta scores: E(): 1.7e-106, 66.26% id in 412 aa; transport-related membrane protein 2428723..2430009 Burkholderia pseudomallei K96243 3092589 YP_108631.1 CDS BPSL2034 NC_006350.1 2430054 2431037 D Similar to Ralstonia solanacearum probable hydrolase transmembrane protein rsp0233 or rs05190 SWALL:Q8XT82 (EMBL:AL646077) (302 aa) fasta scores: E(): 1.6e-52, 50.55% id in 269 aa, and to Campylobacter jejuni hypothetical protein cj0556 SWALL:Q9PHV9 (EMBL:AL139075) (265 aa) fasta scores: E(): 4.1e-24, 30.48% id in 269 aa; hydrolase 2430054..2431037 Burkholderia pseudomallei K96243 3092590 YP_108632.1 CDS BPSL2035 NC_006350.1 2431505 2431786 D Similar to the plasmid borne Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 6.6e-11, 45.26% id in 95 aa, and to Ralstonia solanacearum HNS-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 1.7e-10, 42.42% id in 99 aa; regulatory protein 2431505..2431786 Burkholderia pseudomallei K96243 3092674 YP_108633.1 CDS BPSL2036 NC_006350.1 2432049 2432318 R hypothetical protein complement(2432049..2432318) Burkholderia pseudomallei K96243 3092675 YP_108634.1 CDS BPSL2037 NC_006350.1 2432687 2432866 D hypothetical protein 2432687..2432866 Burkholderia pseudomallei K96243 3093746 YP_108635.1 CDS BPSL2038 NC_006350.1 2433790 2434656 R hypothetical protein complement(2433790..2434656) Burkholderia pseudomallei K96243 3093747 YP_108636.1 CDS BPSL2039 NC_006350.1 2434826 2437660 R Similar to Ralstonia solanacearum transmembrane protein rsp0752 or rs01956 SWALL:Q8XRS9 (EMBL:AL646080) (925 aa) fasta scores: E(): 4.2e-08, 21.03% id in 989 aa; hypothetical protein complement(2434826..2437660) Burkholderia pseudomallei K96243 3092997 YP_108637.1 CDS BPSL2040 NC_006350.1 2437681 2438556 R hypothetical protein complement(2437681..2438556) Burkholderia pseudomallei K96243 3092998 YP_108638.1 CDS BPSL2041 NC_006350.1 2438558 2441398 R Similar to Salmonella enterica subsp. enterica serovar Typhimurium VrgS protein SWALL:Q93IR3 (EMBL:AJ320483) (729 aa) fasta scores: E(): 1.8e-11, 26.08% id in 552 aa, and to Ralstonia solanacearum VGR-related protein rsp0750 or rs01958 SWALL:Q8XRT1 (EMBL:AL646080) (918 aa) fasta scores: E(): 1.4e-57, 40.27% id in 961 aa. Note: Also similar to BPSL2050 (933 aa) fasta scores: E(): 3.5e-32, 30.665% identity in 962 aa overlap; hypothetical protein complement(2438558..2441398) Burkholderia pseudomallei K96243 3094115 YP_108639.1 CDS BPSL2042 NC_006350.1 2441411 2441716 R Low similarity to Escherichia coli, and Escherichia coli O157:H7 cell division protein FtsL or MraR or b0083 or z0093 or ecs0087 SWALL:FTSL_ECOLI (SWALL:P22187) (121 aa) fasta scores: E(): 0.89, 33.33% id in 93 aa; hypothetical protein complement(2441411..2441716) Burkholderia pseudomallei K96243 3094116 YP_108640.1 CDS BPSL2042A NC_006350.1 2441735 2441998 R hypothetical protein complement(2441735..2441998) Burkholderia pseudomallei K96243 3091490 YP_108641.1 CDS BPSL2043 NC_006350.1 2442210 2442749 R lipoprotein complement(2442210..2442749) Burkholderia pseudomallei K96243 3091491 YP_108642.1 CDS BPSL2044 NC_006350.1 2442840 2443061 R hypothetical protein complement(2442840..2443061) Burkholderia pseudomallei K96243 3093028 YP_108643.1 CDS BPSL2045 NC_006350.1 2443066 2443557 R lipoprotein complement(2443066..2443557) Burkholderia pseudomallei K96243 3093029 YP_108644.1 CDS BPSL2046 NC_006350.1 2443535 2446870 R Similar to Ralstonia solanacearum VGR-related protein rsp0738 or rs01970 SWALL:Q8XRU3 (EMBL:AL646080) (898 aa) fasta scores: E(): 4.6e-55, 40.98% id in 893 aa, and to Pseudomonas aeruginosa hypothetical protein pa5090 SWALL:Q9HU93 (EMBL:AE004921) (790 aa) fasta scores: E(): 2.3e-15, 25.98% id in 812 aa; hypothetical protein complement(2443535..2446870) Burkholderia pseudomallei K96243 3092585 YP_108645.1 CDS BPSL2047 NC_006350.1 2446979 2449387 R Similar to the N-terminal region of Ralstonia solanacearum hypothetical protein rsp0177 or rs04689 SWALL:Q8XTD6 (EMBL:AL646077) (740 aa) fasta scores: E(): 8.9e-16, 38.02% id in 760 aa; hypothetical protein complement(2446979..2449387) Burkholderia pseudomallei K96243 3092586 YP_108646.1 CDS BPSL2048 NC_006350.1 2449384 2449977 R Similar to Pseudomonas sp. CA10 hypothetical 18.9 kDa protein SWALL:Q9AQM6 (EMBL:AB047548) (170 aa) fasta scores: E(): 2.1e-11, 35.92% id in 167 aa; hypothetical protein complement(2449384..2449977) Burkholderia pseudomallei K96243 3092178 YP_108647.1 CDS BPSL2048A NC_006350.1 2449974 2450531 R Similar to Pseudomonas sp. CA10 hypothetical 18.9 kDa protein SWALL:Q9AQM6 (EMBL:AB047548) (170 aa) fasta scores: E(): 4.1e-08, 31.88% id in 138 aa; hypothetical protein complement(2449974..2450531) Burkholderia pseudomallei K96243 3092179 YP_108648.1 CDS BPSL2049 NC_006350.1 2450668 2451501 R Similar to Ralstonia solanacearum hypothetical protein rsp0176 rsp0176 or rs06148 SWALL:Q8XTD7 (EMBL:AL646077) (278 aa) fasta scores: E(): 5.8e-23, 38.8% id in 268 aa; hypothetical protein complement(2450668..2451501) Burkholderia pseudomallei K96243 3093281 YP_108649.1 CDS BPSL2050 NC_006350.1 2451504 2454302 R Similar to Ralstonia solanacearum VGR-related protein rsp0750 or rs01958 SWALL:Q8XRT1 (EMBL:AL646080) (918 aa) fasta scores: E(): 1.7e-37, 30.16% id in 968 aa, and to Pseudomonas aeruginosa hypothetical protein pa0262 SWALL:Q9I6M7 (EMBL:AE004464) (1019 aa) fasta scores: E(): 3.9e-07, 26.49% id in 902 aa. Note: Also similar to BPSL2041 (947 aa) fasta scores: E(): 1.1e-34, 30.489% identity in 961 aa overlap; hypothetical protein complement(2451504..2454302) Burkholderia pseudomallei K96243 3093282 YP_108650.1 CDS BPSL2051 NC_006350.1 2454823 2455089 D Similar to Ralstonia solanacearum hypothetical protein rsp0765 or rs01943 SWALL:Q8XRR6 (EMBL:AL646080) (89 aa) fasta scores: E(): 2e-13, 52.87% id in 87 aa, and to the N-terminal region of Burkholderia thailandensis gp29 SWALL:Q8VP97 (EMBL:AY063741) (186 aa) fasta scores: E(): 3.1e-07, 42.16% id in 83 aa; hypothetical protein 2454823..2455089 Burkholderia pseudomallei K96243 3093693 YP_108651.1 CDS BPSL2052 NC_006350.1 2455086 2456528 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0764 or rs01944 SWALL:Q8XRR7 (EMBL:AL646080) (495 aa) fasta scores: E(): 1.4e-18, 33.26% id in 487 aa; hypothetical protein 2455086..2456528 Burkholderia pseudomallei K96243 3093694 YP_108652.1 CDS BPSL2053 NC_006350.1 2456556 2458406 R Similar to Ralstonia solanacearum hypothetical protein rsp0747 or rs01961 SWALL:Q8XRT4 (EMBL:AL646080) (616 aa) fasta scores: E(): 4.6e-108, 47.43% id in 624 aa, and to Escherichia coli O157:H7 hypothetical protein z0260 or ecs0229 SWALL:Q8X7U6 (EMBL:AE005198) (616 aa) fasta scores: E(): 1e-25, 25.39% id in 626 aa; hypothetical protein complement(2456556..2458406) Burkholderia pseudomallei K96243 3092313 YP_108653.1 CDS BPSL2054 NC_006350.1 2458817 2459293 R hypothetical protein complement(2458817..2459293) Burkholderia pseudomallei K96243 3092314 YP_108654.1 CDS BPSL2055 NC_006350.1 2459672 2460508 R Similar to Rhizobium loti hypothetical protein mll0618 SWALL:Q98ME0 (EMBL:AP002995) (284 aa) fasta scores: E(): 4.1e-18, 33.68% id in 288 aa, and to Deinococcus radiodurans hypothetical protein dra0340 SWALL:Q9RYH3 (EMBL:AE001863) (276 aa) fasta scores: E(): 1.3e-17, 35.76% id in 274 aa; hypothetical protein complement(2459672..2460508) Burkholderia pseudomallei K96243 3092165 YP_108655.1 CDS BPSL2056 NC_006350.1 2460880 2463447 D C-terminal region similar to C-terminal region of Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 5.7e-72, 44.69% id in 490 aa; oxidase 2460880..2463447 Burkholderia pseudomallei K96243 3092166 YP_108656.1 CDS BPSL2057 NC_006350.1 2463474 2463962 D hypothetical protein 2463474..2463962 Burkholderia pseudomallei K96243 3092550 YP_108657.1 CDS BPSL2058 NC_006350.1 2463997 2464557 D Similar to Ralstonia solanacearum transmembrane protein rsc2292 or rs01263 SWALL:Q8XX26 (EMBL:AL646069) (207 aa) fasta scores: E(): 1.3e-05, 27.89% id in 190 aa; hypothetical protein 2463997..2464557 Burkholderia pseudomallei K96243 3092551 YP_108658.1 CDS BPSL2059 NC_006350.1 2464603 2464836 D hypothetical protein 2464603..2464836 Burkholderia pseudomallei K96243 3091786 YP_108659.1 CDS BPSL2060 NC_006350.1 2465295 2465639 R Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 9.1e-05, 36.55% id in 93 aa; hypothetical protein complement(2465295..2465639) Burkholderia pseudomallei K96243 3091787 YP_108660.1 CDS BPSL2061 NC_006350.1 2465656 2467185 R Similar to the C-terminal region of Caulobacter crescentus FlbA protein or cc1457 SWALL:FLBA_CAUCR (SWALL:P21296) (596 aa) fasta scores: E(): 3.1e-20, 30.36% id in 494 aa, and to Ralstonia solanacearum hypothetical protein rsc3164 rsc3164 or rs00434 SWALL:Q8XUM3 (EMBL:AL646074) (387 aa) fasta scores: E(): 5.2e-11, 34.16% id in 322 aa; hypothetical protein complement(2465656..2467185) Burkholderia pseudomallei K96243 3094074 YP_108661.1 CDS BPSL2062 NC_006350.1 2467187 2467897 R Similar to Escherichia vulneris outer membrane protein II OmpA SWALL:Q47880 (EMBL:M63350) (244 aa) fasta scores: E(): 1.3e-14, 35% id in 220 aa. C-terminal region is similar to the C-terminus of Klebsiella pneumoniae outer membrane protein a precursor OmpA SWALL:OMPA_KLEPN (SWALL:P24017) (344 aa) fasta scores: E(): 1.3e-15, 38.69% id in 199 aa; OmpA family protein complement(2467187..2467897) Burkholderia pseudomallei K96243 3094075 YP_108662.1 CDS BPSL2063 NC_006350.1 2467978 2471250 R Weakly similar to Rhizobium meliloti hypothetical protein r00458 r00458 or smc01708 SWALL:Q92KQ7 (EMBL:AL591783) (1291 aa) fasta scores: E(): 4.5e-25, 29.01% id in 1282 aa, and to and internal region of Rhizobium loti hypothetical protein Mll2848 mll2848 SWALL:Q98HJ2 (EMBL:AP003000) (1953 aa) fasta scores: E(): 6.9e-31, 31.24% id in 1258 aa; hypothetical protein complement(2467978..2471250) Burkholderia pseudomallei K96243 3093202 YP_108663.1 CDS BPSL2064 NC_006350.1 2471336 2471470 R hypothetical protein complement(2471336..2471470) Burkholderia pseudomallei K96243 3093203 YP_108664.1 CDS BPSL2065 NC_006350.1 2471650 2472360 R Similar to Bacillus subtilis alkaline phosphatase synthesis transcriptional regulatory protein PhoP SWALL:PHOP_BACSU (SWALL:P13792) (240 aa) fasta scores: E(): 2.7e-21, 34.91% id in 232 aa, and to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 4.6e-29, 39.91% id in 228 aa; two component system response regulator complement(2471650..2472360) Burkholderia pseudomallei K96243 3093071 YP_108665.1 CDS BPSL2066 NC_006350.1 2473336 2473707 R Similar to Salmonella typhimurium LT2 fels-1 prophage hypothetical protein stm0905 SWALL:Q8ZQH6 (EMBL:AE008737) (132 aa) fasta scores: E(): 1.4e-23, 54.16% id in 120 aa, and to Escherichia coli hypothetical protein precursor YcgJ or b1177 SWALL:YCGJ_ECOLI (SWALL:P76001) (122 aa) fasta scores: E(): 2.2e-19, 49.55% id in 113 aa; hypothetical protein complement(2473336..2473707) Burkholderia pseudomallei K96243 3093072 YP_108666.1 CDS BPSL2067 NC_006350.1 2473718 2473933 R hypothetical protein complement(2473718..2473933) Burkholderia pseudomallei K96243 3093709 YP_108667.1 CDS BPSL2068 NC_006350.1 2474112 2474894 R Similar to Escherichia coli, and Escherichia coli O157:H7 phosphate regulon transcriptional regulatory protein PhoB or b0399 or z0497 or ecs0449 SWALL:PHOB_ECOLI (SWALL:P08402) (229 aa) fasta scores: E(): 6.6e-19, 31.41% id in 226 aa, and to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 4.2e-24, 34.97% id in 223 aa. Note: Also similar to the downstream CDS BPSL2065 (237 aa) fasta scores: E(): 7.1e-34, 45.455% identity in 231 aa overlap; two component system response regulator complement(2474112..2474894) Burkholderia pseudomallei K96243 3093710 YP_108668.1 CDS BPSL2069 NC_006350.1 2475308 2476240 R Similar to Escherichia coli transcriptional regulator AbgR or b1339 SWALL:ABGR_ECOLI (SWALL:P77744) (302 aa) fasta scores: E(): 6.1e-13, 24.73% id in 287 aa, and to Xanthomonas axonopodis transcriptional regulator YbhD or xac3476 SWALL:Q8PGY6 (EMBL:AE011995) (300 aa) fasta scores: E(): 2.8e-19, 32.46% id in 308 aa; LysR family transcriptional regulator complement(2475308..2476240) Burkholderia pseudomallei K96243 3093695 YP_108669.1 CDS BPSL2070 NC_006350.1 2476552 2477943 R hypothetical protein complement(2476552..2477943) Burkholderia pseudomallei K96243 3093696 YP_108670.1 CDS BPSL2071 NC_006350.1 2478691 2478885 R hypothetical protein complement(2478691..2478885) Burkholderia pseudomallei K96243 3093533 YP_108671.1 CDS BPSL2072 NC_006350.1 2479571 2479789 D hypothetical protein 2479571..2479789 Burkholderia pseudomallei K96243 3093534 YP_108672.1 CDS phaZ NC_006350.1 2480505 2481983 D Similar to Alcaligenes faecalis PolY poly(3-hydroxybutyrate) depolymerase precursor (EC 3.1.1.75) (PHB depolymerase) SWALL:PHB_ALCFA (SWALL:P12625) (488 aa) fasta scores: E(): 5.8e-152, 80.28% id in 487 aa, and to Burkholderia pickettii PolY SWALL:Q9XDX7 (EMBL:AB022287) (492 aa) fasta scores: E(): 5.8e-152, 81.19% id in 484 aa; poly(3-hydroxybutyrate) depolymerase 2480505..2481983 Burkholderia pseudomallei K96243 3093222 YP_108673.1 CDS BPSL2074 NC_006350.1 2482438 2485884 D Similar to the full length of Ralstonia solanacearum alpha-amylase-related protein rsp0241 or rs05182 SWALL:Q8XT74 (EMBL:AL646077) (1201 aa) fasta scores: E(): 4.5e-145, 51.26% id in 1151 aa, and C-terminal region to Chlorobium tepidum alpha-amylase ct2089 SWALL:AAM73306 (EMBL:AE012958) (670 aa) fasta scores: E(): 2.7e-102, 44.68% id in 658 aa; alpha-amylase-like protein 2482438..2485884 Burkholderia pseudomallei K96243 3094840 YP_108674.1 CDS BPSL2075 NC_006350.1 2485881 2489276 D Similar to Thermus thermophilus trehalose synthase TreS SWALL:TRES_THETH (SWALL:O06458) (963 aa) fasta scores: E(): 2.6e-123, 49.86% id in 736 aa, and to Pseudomonas aeruginosa probable trehalose synthase pa2152 SWALL:Q9I1W3 (EMBL:AE004642) (1100 aa) fasta scores: E(): 0, 59.06% id in 1114 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; trehalose synthase 2485881..2489276 Burkholderia pseudomallei K96243 3094841 YP_108675.1 CDS glgB NC_006350.1 2489273 2491489 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 2489273..2491489 Burkholderia pseudomallei K96243 3092569 YP_108676.1 CDS BPSL2077 NC_006350.1 2491542 2493650 D Similar to Escherichia coli glycogen operon protein GlgX or GlyX or b3431 SWALL:GLGX_ECOLI (SWALL:P15067) (657 aa) fasta scores: E(): 1.8e-99, 46.11% id in 657 aa, and to Ralstonia solanacearum probable glycogen operon protein rsp0238 or rs05185 SWALL:Q8XT77 (EMBL:AL646077) (754 aa) fasta scores: E(): 6.3e-199, 65.58% id in 709 aa, and to; glycogen operon-like protein 2491542..2493650 Burkholderia pseudomallei K96243 3094846 YP_108677.1 CDS BPSL2078 NC_006350.1 2493677 2495581 D Similar to Rhizobium sp. malto-oligosyltrehalose trehalohydrolase TreZ SWALL:TREZ_RHISP (SWALL:Q53238) (596 aa) fasta scores: E(): 2.9e-35, 40.48% id in 573 aa, and to Ralstonia solanacearum maltooligosyl trehalose trehalohydrolase rsp0237 or rs05186 SWALL:Q8XT78 (EMBL:AL646077) (622 aa) fasta scores: E(): 6.4e-131, 60% id in 620 aa; trehalose trehalohydrolase 2493677..2495581 Burkholderia pseudomallei K96243 3094847 YP_108678.1 CDS BPSL2079 NC_006350.1 2495578 2497800 D Similar to Escherichia coli 4-alpha-glucanotransferase MalQ or MalA or b3416 SWALL:MALQ_ECOLI (SWALL:P15977) (694 aa) fasta scores: E(): 8.2e-51, 31.39% id in 739 aa, and to Ralstonia solanacearum 4-alpha-glucanotransferase rsp0236 or rs05187 SWALL:Q8XT79 (EMBL:AL646077) (774 aa) fasta scores: E(): 1.3e-81, 47.12% id in 783 aa; glucanotransferase 2495578..2497800 Burkholderia pseudomallei K96243 3091923 YP_108679.1 CDS BPSL2080 NC_006350.1 2497797 2500589 D Similar to Pseudomonas aeruginosa probable glycosyl hydrolase pa2162 SWALL:Q9I1V3 (EMBL:AE004643) (926 aa) fasta scores: E(): 7.5e-143, 47.62% id in 947 aa, and to Salmonella typhimurium glycosyl hydrolase stm1559 SWALL:Q8ZPF1 (EMBL:AE008768) (842 aa) fasta scores: E(): 2.1e-23, 36.76% id in 914 aa; glycosyl hydrolase 2497797..2500589 Burkholderia pseudomallei K96243 3091924 YP_108680.1 CDS BPSL2081 NC_006350.1 2500774 2501262 R Similar in its C-terminal region to the C-terminal region in Xylella fastidiosa tryptophan repressor binding protein xf1133 SWALL:Q9PE95 (EMBL:AE003949) (189 aa) fasta scores: E(): 2.1e-16, 52.83% id in 106 aa, and also in Escherichia coli hypothetical 19.6 kDa protein SWALL:Q9F7X7 (EMBL:AF270497) (183 aa) fasta scores: E(): 7.5e-09, 40% id in 105 aa; hypothetical protein complement(2500774..2501262) Burkholderia pseudomallei K96243 3094877 YP_108681.1 CDS BPSL2082 NC_006350.1 2501376 2501753 R Similar to Caulobacter crescentus hypothetical protein cc2974 SWALL:Q9A469 (EMBL:AE005961) (123 aa) fasta scores: E(): 8.2e-11, 36.6% id in 112 aa; hypothetical protein complement(2501376..2501753) Burkholderia pseudomallei K96243 3094878 YP_108682.1 CDS BPSL2083 NC_006350.1 2501976 2503436 D Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 6.5e-50, 36.92% id in 474 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc3119 or rs00574 SWALL:Q8XUR6 (EMBL:AL646073) (488 aa) fasta scores: E(): 2.6e-47, 40.55% id in 466 aa; GntR family transcriptional regulator 2501976..2503436 Burkholderia pseudomallei K96243 3091569 YP_108683.1 CDS BPSL2084 NC_006350.1 2503503 2505482 R N-terminal region similar to Bradyrhizobium sp. nodulation protein NolA SWALL:NOLA_BRASN (SWALL:P50330) (237 aa) fasta scores: E(): 1e-11, 31.78% id in 236 aa, and C-terminal region similar to Rhizobium loti hypothetical protein mlr0915 SWALL:Q98LR1 (EMBL:AP002996) (299 aa) fasta scores: E(): 6.8e-31, 41.69% id in 271 aa. Note: There is a region of approx. 100 residues in between these two regions of similarity that presents no matches to the databases entries. Possible fusion protein; hypothetical protein complement(2503503..2505482) Burkholderia pseudomallei K96243 3091570 YP_108684.1 CDS BPSL2086 NC_006350.1 2506560 2507069 D hypothetical protein 2506560..2507069 Burkholderia pseudomallei K96243 3093762 YP_108685.1 CDS BPSL2087A NC_006350.1 2507411 2508013 D Very low and partial similarity to Pseudomonas aeruginosa hypothetical protein pa3907 SWALL:Q9HXA6 (EMBL:AE004808) (261 aa) fasta scores: E(): 0.00015, 30.87% id in 149 aa; hypothetical protein 2507411..2508013 Burkholderia pseudomallei K96243 3094425 YP_108686.1 CDS BPSL2088 NC_006350.1 2508020 2508742 D Very low and partial similarity to Pseudomonas aeruginosa hypothetical protein pa3908 SWALL:Q9HXA5 (EMBL:AE004808) (239 aa) fasta scores: E(): 0.001, 25.43% id in 228 aa; hypothetical protein 2508020..2508742 Burkholderia pseudomallei K96243 3094426 YP_108687.1 CDS BPSL2090 NC_006350.1 2509753 2510595 D Similar to Ralstonia solanacearum phytoene synthase crtb or rsc1652 or rs04029 SWALL:Q8XYV4 (EMBL:AL646065) (290 aa) fasta scores: E(): 3.7e-43, 47.65% id in 277 aa, and to Neisseria meningitidis poly-isoprenyl transferase nma1339 SWALL:Q9JUF5 (EMBL:AL162755) (290 aa) fasta scores: E(): 7.4e-27, 35.53% id in 273 aa; transferase 2509753..2510595 Burkholderia pseudomallei K96243 3093960 YP_108688.1 CDS BPSL2091 NC_006350.1 2510636 2511892 R Similar to Ralstonia solanacearum hypothetical protein rsc1651 or rs04028 SWALL:Q8XYV5 (EMBL:AL646065) (394 aa) fasta scores: E(): 7e-83, 56.45% id in 418 aa, and to Caulobacter crescentus hypothetical protein cc1979 SWALL:Q9A6V4 (EMBL:AE005871) (407 aa) fasta scores: E(): 3.5e-23, 31.48% id in 432 aa; hypothetical protein complement(2510636..2511892) Burkholderia pseudomallei K96243 3093961 YP_108689.1 CDS BPSL2092 NC_006350.1 2511975 2513390 R Similar to Ralstonia solanacearum probable signal peptide protein rsc1650 or rs04027 SWALL:Q8XYV6 (EMBL:AL646065) (538 aa) fasta scores: E(): 1.1e-84, 51.62% id in 492 aa, and to Xanthomonas campestris hypothetical protein xcc3941 SWALL:AAM43162 (EMBL:AE012514) (529 aa) fasta scores: E(): 8e-11, 32.78% id in 427 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; hypothetical protein complement(2511975..2513390) Burkholderia pseudomallei K96243 3093083 YP_108690.1 CDS BPSL2093 NC_006350.1 2513634 2513972 R hypothetical protein complement(2513634..2513972) Burkholderia pseudomallei K96243 3093084 YP_108691.1 CDS ompR NC_006350.1 2514194 2514919 D part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 2514194..2514919 Burkholderia pseudomallei K96243 3094372 YP_108692.1 CDS BPSL2095 NC_006350.1 2514986 2516344 D Similar to Escherichia coli osmolarity sensor protein EnvZ or OmpB or PerA or Tpo or b3404 SWALL:ENVZ_ECOLI (SWALL:P02933) (450 aa) fasta scores: E(): 7.8e-31, 32.3% id in 452 aa, and to Ralstonia solanacearum probable oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein RisS or rsc1647 or rs04023 SWALL:Q8XYV9 (EMBL:AL646065) (453 aa) fasta scores: E(): 9.1e-95, 57.53% id in 438 aa; oxidative stress related two component system, sensor kinase 2514986..2516344 Burkholderia pseudomallei K96243 3093607 YP_108693.1 CDS BPSL2096 NC_006350.1 2516543 2517091 D Similar to Brucella melitensis alkyl hydroperoxide reductase C22 protein bmeii0577 SWALL:Q8YCF3 (EMBL:AE009694) (184 aa) fasta scores: E(): 6.4e-53, 70.33% id in 182 aa, and to Streptomyces viridosporus alkyl hydroperoxide reductase AhpC SWALL:Q9X5V0 (EMBL:AF127576) (194 aa) fasta scores: E(): 1.2e-30, 50.55% id in 180 aa; hydroperoxide reductase 2516543..2517091 Burkholderia pseudomallei K96243 3093608 YP_108694.1 CDS BPSL2097 NC_006350.1 2517169 2517696 D Similar to Ralstonia solanacearum antioxidant protein rsc1645 or rs04020 SWALL:Q8XYW1 (EMBL:AL646065) (175 aa) fasta scores: E(): 7.9e-49, 76.87% id in 173 aa, and to Mycobacterium tuberculosis, and Mycobacterium bovis AhpD protein or rv2429 or mt2504 or mtcy428.17C SWALL:AHPD_MYCTU (SWALL:Q57353) (177 aa) fasta scores: E(): 1.6e-11, 37.93% id in 174 aa; hypothetical protein 2517169..2517696 Burkholderia pseudomallei K96243 3093476 YP_108695.1 CDS ispF NC_006350.1 2518066 2518554 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2518066..2518554) Burkholderia pseudomallei K96243 3092071 YP_108696.1 CDS ispD NC_006350.1 2518595 2519305 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(2518595..2519305) Burkholderia pseudomallei K96243 3092513 YP_108697.1 CDS mfd NC_006350.1 2519326 2522895 D Similar to Escherichia coli transcription-repair coupling factor Mfd or b1114 SWALL:MFD_ECOLI (SWALL:P30958) (1148 aa) fasta scores: E(): 4.3e-213, 51.04% id in 1152 aa, and to Ralstonia solanacearum probable transcription-repair coupling factor protein rsc1642 or rs04017 SWALL:Q8XYW4 (EMBL:AL646065) (1157 aa) fasta scores: E(): 0, 74.78% id in 1150 aa. Note: This CDS is longer in its N-terminal region than most of its database matches and has two possible alternative start codons at residues 15 and 33; transcription-repair coupling factor 2519326..2522895 Burkholderia pseudomallei K96243 3093860 YP_108698.2 CDS BPSL2101 NC_006350.1 2524088 2525305 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2524088..2525305 Burkholderia pseudomallei K96243 3093477 YP_108699.1 CDS BPSL2102 NC_006350.1 2525367 2526398 D Similar to Escherichia coli, and Escherichia coli O157:H7 threonine dehydratase catabolic TdcB or b3117 or z4469 or ecs3997 SWALL:THD2_ECOLI (SWALL:P05792) (329 aa) fasta scores: E(): 1.8e-29, 36.9% id in 317 aa, and to Streptomyces coelicolor threonine dehydratase sco0821 or scf43a.11C SWALL:Q9XAA4 (EMBL:AL096837) (325 aa) fasta scores: E(): 8.4e-34, 37.81% id in 320 aa; threonine dehydratase 2525367..2526398 Burkholderia pseudomallei K96243 3094380 YP_108700.1 CDS BPSL2103 NC_006350.1 2526906 2527313 D Similar to Xanthomonas campestris hypothetical protein xcc3078 SWALL:AAM42349 (EMBL:AE012422) (146 aa) fasta scores: E(): 1.8e-06, 37.24% id in 145 aa; hypothetical protein 2526906..2527313 Burkholderia pseudomallei K96243 3094381 YP_108701.1 CDS BPSL2104 NC_006350.1 2527868 2530426 R Similar to Ralstonia solanacearum probable penicillin-binding 1 rsc2976 or rs01357 SWALL:Q8XV55 (EMBL:AL646073) (801 aa) fasta scores: E(): 2.2e-183, 61.61% id in 805 aa, and to Neisseria lactamica penicillin-binding protein 1A MrcA or PonA SWALL:PBPA_NEILA (SWALL:O87579) (798 aa) fasta scores: E(): 4.3e-129, 47.4% id in 791 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; penicillin-binding protein complement(2527868..2530426) Burkholderia pseudomallei K96243 3093585 YP_108702.1 CDS BPSL2105 NC_006350.1 2530906 2531586 D Similar to Synechocystis sp. hypothetical protein sll0617 SWALL:Y617_SYNY3 (SWALL:Q55707) (267 aa) fasta scores: E(): 7.6e-11, 30.49% id in 223 aa, and to Deinococcus radiodurans phage shock protein A dr1473 SWALL:Q9RUB7 (EMBL:AE001992) (223 aa) fasta scores: E(): 6.3e-10, 27.87% id in 226 aa; hypothetical protein 2530906..2531586 Burkholderia pseudomallei K96243 3093586 YP_108703.1 CDS BPSL2106 NC_006350.1 2531701 2532915 D hypothetical protein 2531701..2532915 Burkholderia pseudomallei K96243 3093805 YP_108704.1 CDS mscL NC_006350.1 2533099 2533530 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2533099..2533530 Burkholderia pseudomallei K96243 3092570 YP_108705.1 CDS BPSL2108 NC_006350.1 2533842 2534339 D hypothetical protein 2533842..2534339 Burkholderia pseudomallei K96243 3093806 YP_108706.1 CDS BPSL2109 NC_006350.1 2534521 2535408 R Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR or GlxB1 or b0509 SWALL:GLXR_ECOLI (SWALL:P77161) (292 aa) fasta scores: E(): 2.7e-23, 34.7% id in 291 aa, and to Ralstonia solanacearum probable oxidoreductase rsc2429 or rs02679 SWALL:Q8XWP4 (EMBL:AL646070) (298 aa) fasta scores: E(): 3.1e-23, 33.21% id in 292 aa; glyoxylate-like oxidoreductase complement(2534521..2535408) Burkholderia pseudomallei K96243 3093976 YP_108707.1 CDS BPSL2110 NC_006350.1 2535552 2535761 D Similar to Ralstonia solanacearum hypothetical protein rsp1175 or rs05065 SWALL:Q8XQP6 (EMBL:AL646083) (83 aa) fasta scores: E(): 1.2e-14, 58.82% id in 68 aa, and to Pseudomonas aeruginosa hypothetical protein pa0038 SWALL:Q9I794 (EMBL:AE004443) (71 aa) fasta scores: E(): 5.2e-14, 60.29% id in 68 aa; hypothetical protein 2535552..2535761 Burkholderia pseudomallei K96243 3093977 YP_108708.1 CDS BPSL2111 NC_006350.1 2536505 2537434 D Similar to Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 4.1e-26, 31.39% id in 293 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2094 or rs03659 SWALL:Q8XXL9 (EMBL:AL646068) (316 aa) fasta scores: E(): 2.1e-68, 54.63% id in 302 aa; LysR family transcriptional regulator 2536505..2537434 Burkholderia pseudomallei K96243 3092956 YP_108709.1 CDS BPSL2112 NC_006350.1 2537704 2539134 R catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase complement(2537704..2539134) Burkholderia pseudomallei K96243 3092957 YP_108710.1 CDS BPSL2113 NC_006350.1 2539694 2540053 D Similar to Bacillus subtilis transthyretin-like protein PucM SWALL:PUCM_BACSU (SWALL:O32142) (121 aa) fasta scores: E(): 2.4e-22, 49.57% id in 117 aa, and to Ralstonia solanacearum hypothetical transthyretin-like protein rsc2116 or rs01488 SWALL:YL16_RALSO (SWALL:Q8XXJ7) (117 aa) fasta scores: E(): 6.7e-30, 64.95% id in 117 aa; purine catabolism-like protein 2539694..2540053 Burkholderia pseudomallei K96243 3094679 YP_108711.1 CDS BPSL2114 NC_006350.1 2540103 2541305 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2115 or rs01489 SWALL:Q8XXJ8 (EMBL:AL646068) (414 aa) fasta scores: E(): 2.5e-80, 59.46% id in 412 aa, and to Rhizobium meliloti hypothetical membrane protein rb0796 or smb21292 SWALL:Q92VB2 (EMBL:AL603644) (412 aa) fasta scores: E(): 2.3e-66, 45.54% id in 404 aa; hypothetical protein 2540103..2541305 Burkholderia pseudomallei K96243 3094680 YP_108712.1 CDS BPSL2115 NC_006350.1 2542171 2542683 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(2542171..2542683) Burkholderia pseudomallei K96243 3094421 YP_108713.1 CDS BPSL2116 NC_006350.1 2542680 2543693 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(2542680..2543693) Burkholderia pseudomallei K96243 3094422 YP_108714.1 CDS BPSL2117 NC_006350.1 2543922 2544446 R Similar to Bacillus subtilis uricase PucL SWALL:URIC_BACSU (SWALL:O32141) (494 aa) fasta scores: E(): 2.4e-21, 43.97% id in 166 aa, and to Ralstonia solanacearum hypothetical protein rsc2121 or rs01483 SWALL:Q8XXJ2 (EMBL:AL646068) (173 aa) fasta scores: E(): 8.6e-38, 67.68% id in 164 aa; uricase complement(2543922..2544446) Burkholderia pseudomallei K96243 3093924 YP_108715.1 CDS BPSL2118 NC_006350.1 2544443 2545396 R Similar to Ralstonia solanacearum hypothetical protein rsc2120 or rs01484 SWALL:Q8XXJ3 (EMBL:AL646068) (328 aa) fasta scores: E(): 3.2e-100, 73.46% id in 309 aa, and to Pseudomonas aeruginosa hypothetical protein pa1517 SWALL:Q9I3J6 (EMBL:AE004580) (308 aa) fasta scores: E(): 1e-77, 61.18% id in 304 aa; hypothetical protein complement(2544443..2545396) Burkholderia pseudomallei K96243 3093925 YP_108716.1 CDS BPSL2119 NC_006350.1 2545542 2546516 R Similar to Agrobacterium sp. IP I-671 hydantoin-racemase HyuA SWALL:Q8VT63 (EMBL:AF335479) (247 aa) fasta scores: E(): 6e-34, 53.9% id in 243 aa, and to Pseudomonas sp. hydantoin racemase HyuE SWALL:HYUE_PSESN (SWALL:Q00924) (249 aa) fasta scores: E(): 2.2e-28, 48.96% id in 241 aa. Note: The database matches finish at approximately residue 245 and the C-terminal region of this CDS has a high content in Ala and Pro amino acid residues; amino acid racemase complement(2545542..2546516) Burkholderia pseudomallei K96243 3091737 YP_108717.1 CDS BPSL2120 NC_006350.1 2546527 2548059 R Similar to Bacillus subtilis probable allantoin permease PucI SWALL:ALLP_BACSU (SWALL:P94575) (490 aa) fasta scores: E(): 1.3e-56, 33.97% id in 471 aa, and to Yersinia pestis permease ypo1083 SWALL:Q8ZH28 (EMBL:AJ414146) (494 aa) fasta scores: E(): 6.7e-114, 59.66% id in 481 aa. Note: This CDS has possible alternative start codons at residues 15 or 43; transport-related membrane protein complement(2546527..2548059) Burkholderia pseudomallei K96243 3091738 YP_108718.1 CDS BPSL2121 NC_006350.1 2548172 2548876 R Similar to Ralstonia solanacearum probable transcription regulator protein rsc2117 or rs01487 SWALL:Q8XXJ6 (EMBL:AL646068) (250 aa) fasta scores: E(): 2.7e-31, 44.2% id in 233 aa, and to Agrobacterium tumefaciens transcriptional regulator, GntR family atu4702 or agr_l_357 SWALL:Q8U6V4 (EMBL:AE009398) (225 aa) fasta scores: E(): 3.1e-26, 41.36% id in 220 aa; GntR family transcriptional regulator complement(2548172..2548876) Burkholderia pseudomallei K96243 3093416 YP_108719.1 CDS ldcA NC_006350.1 2549191 2550132 R catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A complement(2549191..2550132) Burkholderia pseudomallei K96243 3093417 YP_108720.1 CDS BPSL2123 NC_006350.1 2550188 2550712 R Similar to Azoarcus evansii hypothetical protein SWALL:CAD21697 (EMBL:AJ428571) (154 aa) fasta scores: E(): 1.6e-38, 69.86% id in 146 aa, and to Salmonella typhimurium, and Salmonella typhi cytosine/adenosine deaminase stm2568 or sty2814 SWALL:Q8XGY4 (EMBL:AE008817) (183 aa) fasta scores: E(): 2.9e-29, 51.8% id in 166 aa; deaminase complement(2550188..2550712) Burkholderia pseudomallei K96243 3091900 YP_108721.1 CDS BPSL2124 NC_006350.1 2550781 2551182 R Similar to Bacillus halodurans hypothetical protein bh0859 SWALL:Q9KEJ3 (EMBL:AP001510) (123 aa) fasta scores: E(): 1.5e-08, 35.71% id in 126 aa, and to Salmonella typhimurium cytoplasmic protein YhdN or stm3413 SWALL:Q8ZLM2 (EMBL:AE008857) (122 aa) fasta scores: E(): 1.7e-08, 35.53% id in 121 aa; hypothetical protein complement(2550781..2551182) Burkholderia pseudomallei K96243 3091901 YP_108722.1 CDS BPSL2125 NC_006350.1 2551984 2552490 R Similar to Pseudomonas aeruginosa hypothetical protein pa0055 SWALL:Q9I777 (EMBL:AE004445) (168 aa) fasta scores: E(): 1.5e-35, 60.47% id in 167 aa, and to Ralstonia solanacearum hypothetical protein rsp1548 or rs02104 SWALL:Q8XPT9 (EMBL:AL646085) (170 aa) fasta scores: E(): 5.5e-27, 52.14% id in 163 aa; hypothetical protein complement(2551984..2552490) Burkholderia pseudomallei K96243 3091514 YP_108723.1 CDS BPSL2126 NC_006350.1 2552858 2554078 D Similar to Pseudomonas aeruginosa hypothetical protein pa1352 SWALL:Q9I3Z2 (EMBL:AE004564) (403 aa) fasta scores: E(): 1.9e-79, 62.28% id in 403 aa, and to Escherichia coli hypothetical protein YgaY or b2680/b2681 SWALL:YGAY_ECOLI (SWALL:P76628) (394 aa) fasta scores: E(): 2.3e-49, 40.21% id in 373 aa; transport-related, membrane protein 2552858..2554078 Burkholderia pseudomallei K96243 3091515 YP_108724.1 CDS guaA NC_006350.1 2555410 2557053 R glutamine-hydrolyzing; contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(2555410..2557053) Burkholderia pseudomallei K96243 3093632 YP_108725.1 CDS BPSL2128 NC_006350.1 2557157 2557810 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1430 or rs05261 SWALL:Q8XZG5 (EMBL:AL646064) (192 aa) fasta scores: E(): 1.5e-09, 35.71% id in 196 aa; hypothetical protein complement(2557157..2557810) Burkholderia pseudomallei K96243 3091512 YP_108726.1 CDS guaB NC_006350.1 2557817 2559277 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(2557817..2559277) Burkholderia pseudomallei K96243 3092041 YP_108727.1 CDS BPSL2130 NC_006350.1 2559694 2560458 R Similar to Rhizobium meliloti hypothetical protein r00748 or smc00803 SWALL:Q92RU4 (EMBL:AL591784) (271 aa) fasta scores: E(): 2.8e-49, 67.79% id in 267 aa, and to Ralstonia solanacearum hypothetical protein rsc1113 or rs04007 SWALL:Q8Y0D1 (EMBL:AL646062) (244 aa) fasta scores: E(): 1.1e-36, 53.15% id in 254 aa; hypothetical protein complement(2559694..2560458) Burkholderia pseudomallei K96243 3091513 YP_108728.1 CDS BPSL2133 NC_006350.1 2561553 2562236 D Similar to Rhizobium meliloti hypothetical protein r00750 or smc00805 SWALL:Q92KM4 (EMBL:AL591784) (214 aa) fasta scores: E(): 1.3e-66, 79.9% id in 214 aa. Note: This CDS is longer in its C-terminal region than most of its database match; hypothetical protein 2561553..2562236 Burkholderia pseudomallei K96243 3092030 YP_108729.1 CDS BPSL2134 NC_006350.1 2562571 2563539 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1428 or rs05264 SWALL:Q8XZG7 (EMBL:AL646064) (313 aa) fasta scores: E(): 4.7e-60, 54.14% id in 314 aa, and to Caulobacter crescentus integral membrane protein cc0848 SWALL:Q9A9W3 (EMBL:AE005761) (312 aa) fasta scores: E(): 1.3e-47, 49.17% id in 303 aa; hypothetical protein 2562571..2563539 Burkholderia pseudomallei K96243 3093758 YP_108730.1 CDS BPSL2135 NC_006350.1 2563691 2564014 R Similar to Yersinia pestis hypothetical protein ypo1103/y3077 ypo1103 or y3077 SWALL:YB03_YERPE (SWALL:Q8ZH12) (94 aa) fasta scores: E(): 5.6e-12, 50% id in 94 aa, and to Escherichia coli protein YfjF or b2618 SWALL:YFJF_ECOLI (SWALL:P52119) (96 aa) fasta scores: E(): 8.8e-12, 54.02% id in 87 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein complement(2563691..2564014) Burkholderia pseudomallei K96243 3093759 YP_108731.1 CDS BPSL2136 NC_006350.1 2564020 2564457 R Similar to Ralstonia solanacearum hypothetical protein rsc1425 or rs05267 SWALL:Q8XZH0 (EMBL:AL646064) (145 aa) fasta scores: E(): 9.4e-46, 73.61% id in 144 aa, and to Escherichia coli hypothetical protein YfjG or b2619 SWALL:YFJG_ECOLI (SWALL:P52121) (158 aa) fasta scores: E(): 1.4e-21, 42.25% id in 142 aa; hypothetical protein complement(2564020..2564457) Burkholderia pseudomallei K96243 3094452 YP_108732.1 CDS smpB NC_006350.1 2564555 2565001 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2564555..2565001 Burkholderia pseudomallei K96243 3092303 YP_108733.1 CDS BPSL2138 NC_006350.1 2565179 2566126 R Similar to Ralstonia solanacearum transmembrane protein rsc1423 or rs05269 SWALL:Q8XZH2 (EMBL:AL646064) (308 aa) fasta scores: E(): 1.4e-87, 84% id in 300 aa, and to Neisseria meningitidis periplasmic protein nma1382 or gna1220 SWALL:Q9JR80 (EMBL:AL162755) (315 aa) fasta scores: E(): 4.6e-54, 65.58% id in 308 aa; hypothetical protein complement(2565179..2566126) Burkholderia pseudomallei K96243 3094453 YP_108734.1 CDS BPSL2139 NC_006350.1 2566206 2566640 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1422 or rs05270 SWALL:Q8XZH3 (EMBL:AL646064) (142 aa) fasta scores: E(): 9.8e-20, 47.88% id in 142 aa, and low similarity to Neisseria meningitidis membrane protein nma1383 SWALL:Q9JUC5 (EMBL:AL162755) (135 aa) fasta scores: E(): 0.00044, 32.37% id in 139 aa; hypothetical protein complement(2566206..2566640) Burkholderia pseudomallei K96243 3094444 YP_108735.1 CDS ppsA NC_006350.1 2566768 2569167 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2566768..2569167) Burkholderia pseudomallei K96243 3092220 YP_108736.1 CDS BPSL2141 NC_006350.1 2569906 2570643 R Similar to Anabaena sp. hypothetical protein alr0975 SWALL:Q8YY76 (EMBL:AP003584) (242 aa) fasta scores: E(): 4.8e-35, 49.53% id in 216 aa, and to Athyrium yokoscense phytochelatin synthase AypCS1 SWALL:Q948S0 (EMBL:AB057412) (488 aa) fasta scores: E(): 6.6e-18, 36.44% id in 214 aa. Note: Appart from the first match quoted, the rest of the significant matches are to N-terminal regions of eukaryotic proteins; hypothetical protein complement(2569906..2570643) Burkholderia pseudomallei K96243 3094445 YP_108737.1 CDS BPSL2142 NC_006350.1 2571036 2572925 R Similar to the N-terminal region of Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 4.6e-65, 46.42% id in 644 aa, and to the full length Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 2.5e-24, 48.07% id in 624 aa; peptidase complement(2571036..2572925) Burkholderia pseudomallei K96243 3092352 YP_108738.1 CDS BPSL2143 NC_006350.1 2573475 2574290 D Similar to Ralstonia solanacearum ATP-binding protein rsc1420 or rs05272 SWALL:Q8XZH5 (EMBL:AL646064) (279 aa) fasta scores: E(): 3.8e-78, 76.49% id in 268 aa, and to Neisseria meningitidis hypothetical protein nmb0619 SWALL:Q9K0I1 (EMBL:AE002417) (273 aa) fasta scores: E(): 2.1e-47, 50.18% id in 267 aa; hypothetical protein 2573475..2574290 Burkholderia pseudomallei K96243 3092353 YP_108739.1 CDS BPSL2144 NC_006350.1 2574492 2575280 R Similar to Ralstonia solanacearum trna/rRNA methyltransferase rsc1419 or rs05273 SWALL:Q8XZH6 (EMBL:AL646064) (259 aa) fasta scores: E(): 2.2e-52, 55.03% id in 258 aa, and to Neisseria meningitidis RNA methyltransferase nma1351 SWALL:Q9JUE8 (EMBL:AL162755) (261 aa) fasta scores: E(): 7.7e-30, 41.44% id in 263 aa; RNA methylase complement(2574492..2575280) Burkholderia pseudomallei K96243 3094042 YP_108740.1 CDS rnhB NC_006350.1 2575277 2575921 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2575277..2575921) Burkholderia pseudomallei K96243 3092384 YP_108741.1 CDS lpxB NC_006350.1 2575921 2577087 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(2575921..2577087) Burkholderia pseudomallei K96243 3094043 YP_108742.1 CDS lpxA NC_006350.1 2577091 2577879 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(2577091..2577879) Burkholderia pseudomallei K96243 3093538 YP_108743.1 CDS fabZ NC_006350.1 2577935 2578444 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(2577935..2578444) Burkholderia pseudomallei K96243 3094303 YP_108744.1 CDS lpxD NC_006350.1 2578548 2579633 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(2578548..2579633) Burkholderia pseudomallei K96243 3093857 YP_108745.1 CDS BPSL2150 NC_006350.1 2579650 2580183 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1413 or rs05279 SWALL:Q8XZI2 (EMBL:AL646064) (184 aa) fasta scores: E(): 6.5e-32, 71.25% id in 160 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 histone-like protein HLP-1 precursor HlpA or Skp or OmpH or b0178 or c0215 or z0190 or ecs0180 SWALL:HLPA_ECOLI (SWALL:P11457) (161 aa) fasta scores: E(): 1.3e-05, 35.44% id in 158 aa; outer membrane protein complement(2579650..2580183) Burkholderia pseudomallei K96243 3092934 YP_108746.1 CDS BPSL2151 NC_006350.1 2580221 2582530 R Similar to Ralstonia solanacearum outer membrane signal peptide protein rsc1412 or rs05280 SWALL:Q8XZI3 (EMBL:AL646064) (765 aa) fasta scores: E(): 4e-194, 63.84% id in 769 aa, and to Pseudomonas aeruginosa probable outer membrane protein pa3648 SWALL:Q9HXY4 (EMBL:AE004784) (797 aa) fasta scores: E(): 3.6e-94, 38% id in 800 aa; outer membrane protein complement(2580221..2582530) Burkholderia pseudomallei K96243 3092935 YP_108747.1 CDS BPSL2152 NC_006350.1 2582595 2583986 R Similar to Escherichia coli, and Escherichia coli O157:H7 protease EcfE or b0176 or z0187 or ecs0178 SWALL:ECFE_ECOLI (SWALL:P37764) (450 aa) fasta scores: E(): 1.2e-37, 39.48% id in 466 aa, and to Ralstonia solanacearum hypothetical zinc metalloprotease rsc1411 or rs05281 SWALL:YE11_RALSO (SWALL:Q8XZI4) (462 aa) fasta scores: E(): 1.2e-66, 45.25% id in 464 aa; membrane-bound protease complement(2582595..2583986) Burkholderia pseudomallei K96243 3092341 YP_108748.1 CDS dxr NC_006350.1 2584004 2585200 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2584004..2585200) Burkholderia pseudomallei K96243 3094319 YP_108749.1 CDS BPSL2154 NC_006350.1 2585215 2586036 R Similar to Escherichia coli, and Escherichia coli O157:H7 phosphatidate cytidylyltransferase CdsA or Cds or b0175 or z0186 or ecs0177 SWALL:CDSA_ECOLI (SWALL:P06466) (249 aa) fasta scores: E(): 9.8e-07, 36.18% id in 257 aa, and to Ralstonia solanacearum probable phosphatidate cytidylyltransferase transmembrane protein rsc1409 or rs05283 SWALL:Q8XZI6 (EMBL:AL646064) (271 aa) fasta scores: E(): 1.5e-42, 54.15% id in 277 aa; phosphatidate cytidylyltransferase membrane protein complement(2585215..2586036) Burkholderia pseudomallei K96243 3092342 YP_108750.1 CDS uppS NC_006350.1 2586030 2586812 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 undecaprenyl pyrophosphate synthetase UppS or Rth or b0174 or c0211 or z0185 or ecs0176 SWALL:UPPS_ECOLI (SWALL:Q47675) (253 aa) fasta scores: E(): 1.4e-47, 54.82% id in 228 aa, and to Ralstonia solanacearum probable undecaprenyl pyrophosphate synthetase rsc1408 or rs05284 SWALL:Q8XZI7 (EMBL:AL646064) (258 aa) fasta scores: E(): 1.9e-68, 67.57% id in 256 aa; undecaprenyl pyrophosphate synthetase complement(2586030..2586812) Burkholderia pseudomallei K96243 3093554 YP_108751.1 CDS frr NC_006350.1 2586860 2587420 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2586860..2587420) Burkholderia pseudomallei K96243 3093900 YP_108752.1 CDS pyrH NC_006350.1 2587511 2588224 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2587511..2588224) Burkholderia pseudomallei K96243 3093161 YP_108753.1 CDS tsf NC_006350.1 2588403 2589284 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2588403..2589284) Burkholderia pseudomallei K96243 3092745 YP_108754.1 CDS rpsB NC_006350.1 2589467 2590207 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2589467..2590207) Burkholderia pseudomallei K96243 3093074 YP_108755.1 CDS map NC_006350.1 2590690 2591505 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 2590690..2591505 Burkholderia pseudomallei K96243 3094064 YP_108756.1 CDS BPSL2161 NC_006350.1 2591671 2594247 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2591671..2594247 Burkholderia pseudomallei K96243 3093139 YP_108757.1 CDS BPSL2162 NC_006350.1 2595237 2595986 D Similar to Neisseria meningitidis hypothetical protein nmb0806 SWALL:Q9K020 (EMBL:AE002434) (252 aa) fasta scores: E(): 2.5e-34, 64.25% id in 249 aa, and to Thermoanaerobacter tengcongensis 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase RsuA2 or tte1332 SWALL:Q8R5S6 (EMBL:AE013093) (236 aa) fasta scores: E(): 1.6e-11, 32.14% id in 252 aa. Note: Most of the database macthes have a longer N-terminal region that this CDS; pseudouridylate synthase 2595237..2595986 Burkholderia pseudomallei K96243 3093140 YP_108758.1 CDS def NC_006350.1 2596181 2596714 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2596181..2596714) Burkholderia pseudomallei K96243 3093958 YP_108759.1 CDS ligA NC_006350.1 2596711 2598786 R Similar to Escherichia coli DNA ligase LigA or Lig or DnaI or PdeC or Lop or b2411 SWALL:DNLJ_ECOLI (SWALL:P15042) (671 aa) fasta scores: E(): 4.8e-141, 57.84% id in 669 aa, and to Yersinia pestis DNA ligase LigA or ypo2989 SWALL:Q8ZCJ6 (EMBL:AJ414154) (670 aa) fasta scores: E(): 6e-139, 57.33% id in 668 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; DNA ligase complement(2596711..2598786) Burkholderia pseudomallei K96243 3092689 YP_108760.1 CDS BPSL2165 NC_006350.1 2599226 2600512 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1397 or rs05761 SWALL:Q8XZJ8 (EMBL:AL646064) (408 aa) fasta scores: E(): 5.9e-54, 47.34% id in 433 aa, and to Neisseria meningitidis hypothetical protein nma0866 SWALL:Q9JVF0 (EMBL:AL162754) (428 aa) fasta scores: E(): 5.2e-08, 25.92% id in 432 aa; hypothetical protein complement(2599226..2600512) Burkholderia pseudomallei K96243 3093959 YP_108761.1 CDS BPSL2166 NC_006350.1 2600579 2604091 R Similar to Bacillus subtilis chromosome partition protein Smc SWALL:SMC_BACSU (SWALL:P51834) (1186 aa) fasta scores: E(): 7.4e-30, 29.27% id in 1206 aa, and to Burkholderia cepacia chromosome partition protein Smc SWALL:Q8VVA2 (EMBL:AJ417689) (1172 aa) fasta scores: E(): 0, 88.88% id in 1170 aa; chromosome partition protein complement(2600579..2604091) Burkholderia pseudomallei K96243 3091528 YP_108762.1 CDS BPSL2167 NC_006350.1 2604240 2605187 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1395 or rs05759 SWALL:Q8XZK0 (EMBL:AL646064) (306 aa) fasta scores: E(): 2.2e-46, 48.65% id in 298 aa, and to Bacillus halodurans hypothetical protein bh1937 SWALL:Q9KBJ0 (EMBL:AP001513) (298 aa) fasta scores: E(): 9e-05, 21.66% id in 300 aa; hypothetical protein complement(2604240..2605187) Burkholderia pseudomallei K96243 3091529 YP_108763.1 CDS BPSL2168 NC_006350.1 2605452 2606684 D catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2605452..2606684 Burkholderia pseudomallei K96243 3093039 YP_108764.1 CDS dapD NC_006350.1 2606741 2607568 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2606741..2607568 Burkholderia pseudomallei K96243 3091791 YP_108765.1 CDS BPSL2170 NC_006350.1 2607568 2607942 D Similar to Escherichia coli protein YffB or b2471 SWALL:YFFB_ECOLI (SWALL:P24178) (118 aa) fasta scores: E(): 3.3e-16, 41.96% id in 112 aa, and to Ralstonia solanacearum hypothetical protein rsc1391 or rs04674 SWALL:Q8XZK4 (EMBL:AL646064) (118 aa) fasta scores: E(): 4.7e-27, 66.37% id in 113 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 2607568..2607942 Burkholderia pseudomallei K96243 3093040 YP_108766.1 CDS dapE NC_006350.1 2608004 2609155 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2608004..2609155 Burkholderia pseudomallei K96243 3091792 YP_108767.1 CDS BPSL2172 NC_006350.1 2609169 2610092 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2609169..2610092 Burkholderia pseudomallei K96243 3092954 YP_108768.1 CDS BPSL2173 NC_006350.1 2610096 2610323 D Doubtful CDS. No significant database matches. Contains a repeat at the N-terminal region; hypothetical protein 2610096..2610323 Burkholderia pseudomallei K96243 3092955 YP_108769.1 CDS cls NC_006350.1 2610320 2611759 D catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2610320..2611759 Burkholderia pseudomallei K96243 3091505 YP_108770.1 CDS gpo NC_006350.1 2611872 2612351 R Full length similarity to Saccharomyces cerevisiae glutathione peroxidase Hyr1 SWALL:GSHJ_YEAST (SWALL:P40581) (163 aa) fasta scores: E(): 1.2e-33, 50.94% id in 159 aa, and to Synechocystis sp. glutathione peroxidase slr1171 SWALL:GPO_SYNY3 (SWALL:P74250) (169 aa) fasta scores: E(): 4.3e-40, 62.11% id in 161 aa; glutathione peroxidase complement(2611872..2612351) Burkholderia pseudomallei K96243 3094481 YP_108771.1 CDS BPSL2176 NC_006350.1 2612497 2614437 D Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter ATP-binding protein YheS or b3352 or z4713 or ecs4203 SWALL:YHES_ECOLI (SWALL:P45535) (637 aa) fasta scores: E(): 4.1e-97, 53.48% id in 645 aa, and to Pasteurella multocida hypothetical protein pm1582 SWALL:Q9CKM9 (EMBL:AE006195) (640 aa) fasta scores: E(): 2e-101, 52.01% id in 646 aa; ABC transporter ATP-binding protein 2612497..2614437 Burkholderia pseudomallei K96243 3091506 YP_108772.1 CDS BPSL2177 NC_006350.1 2614525 2614857 R hypothetical protein complement(2614525..2614857) Burkholderia pseudomallei K96243 3091617 YP_108773.1 CDS radA NC_006350.1 2614955 2616331 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(2614955..2616331) Burkholderia pseudomallei K96243 3092056 YP_108774.1 CDS alr NC_006350.1 2616342 2617412 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(2616342..2617412) Burkholderia pseudomallei K96243 3092804 YP_108775.1 CDS BPSL2180 NC_006350.1 2617624 2618931 D Similar to Escherichia coli hypothetical protein YgeD or b2835 SWALL:YGED_ECOLI (SWALL:P39196) (397 aa) fasta scores: E(): 5.7e-21, 38.18% id in 419 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1370 or rs04653 SWALL:Q8XZM5 (EMBL:AL646064) (438 aa) fasta scores: E(): 3.4e-123, 74.88% id in 438 aa; lysophospholipid transporter LplT 2617624..2618931 Burkholderia pseudomallei K96243 3091618 YP_108776.1 CDS thiD NC_006350.1 2619042 2619851 D Similar to Escherichia coli phosphomethylpyrimidine kinase ThiD or b2103 SWALL:THID_ECOLI (SWALL:P76422) (266 aa) fasta scores: E(): 6.5e-54, 60.45% id in 263 aa, and to Salmonella typhimurium phosphomethylpyrimidine kinase ThiD or stm2146 SWALL:THID_SALTY (SWALL:P55882) (266 aa) fasta scores: E(): 3.4e-53, 59.69% id in 263 aa; phosphomethylpyrimidine kinase 2619042..2619851 Burkholderia pseudomallei K96243 3091851 YP_108777.1 CDS BPSL2182 NC_006350.1 2620271 2621251 R Similar to Pseudomonas aeruginosa hypothetical protein pa3089 SWALL:Q9HZB9 (EMBL:AE004733) (321 aa) fasta scores: E(): 5.5e-20, 36.9% id in 317 aa, and to Neisseria meningitidis hypothetical protein nma1561 SWALL:Q9JU01 (EMBL:AL162756) (292 aa) fasta scores: E(): 2.3e-05, 30.59% id in 304 aa; hypothetical protein complement(2620271..2621251) Burkholderia pseudomallei K96243 3093748 YP_108778.1 CDS BPSL2183 NC_006350.1 2621248 2622102 R Similar to Chlorobium tepidum DNA polymerase, bacteriophage-type ct0206 SWALL:AAM71454 (EMBL:AE012800) (208 aa) fasta scores: E(): 7.4e-28, 43.06% id in 209 aa, and to Thermoanaerobacter tengcongensis uracil-DNA glycosylase tte0077 SWALL:Q8RDF7 (EMBL:AE012981) (186 aa) fasta scores: E(): 3.2e-25, 48.86% id in 176 aa. Note: This CDS has an alternative start codon at residue 65; phage-related DNA polymerase complement(2621248..2622102) Burkholderia pseudomallei K96243 3093749 YP_108779.1 CDS BPSL2184 NC_006350.1 2622584 2623066 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribosomal-protein-alanine acetyltransferase RimI or b4373 or c5453 or z5974 or ecs5331 SWALL:RIMI_ECOLI (SWALL:P09453) (148 aa) fasta scores: E(): 3.1e-12, 35.61% id in 146 aa, and to Pseudomonas aeruginosa peptide N-acetyltransferase pa4678 SWALL:Q9HVB7 (EMBL:AE004881) (150 aa) fasta scores: E(): 2.8e-20, 46.71% id in 152 aa; ribosomal-protein acetyltransferase complement(2622584..2623066) Burkholderia pseudomallei K96243 3093448 YP_108780.1 CDS BPSL2185 NC_006350.1 2623078 2623839 R Similar to Escherichia coli hypothetical protease YeaZ or b1807 SWALL:YEAZ_ECOLI (SWALL:P76256) (231 aa) fasta scores: E(): 1.4e-15, 37.28% id in 236 aa, and to Pseudomonas aeruginosa hypothetical protein pa3685 SWALL:Q9HXV5 (EMBL:AE004788) (226 aa) fasta scores: E(): 4e-19, 43.69% id in 238 aa; family M22 non-peptidase complement(2623078..2623839) Burkholderia pseudomallei K96243 3093449 YP_108781.1 CDS BPSL2186 NC_006350.1 2624009 2624278 D Similar to Homo sapiens acyl-CoA-binding protein Dbi SWALL:ACBP_HUMAN (SWALL:P07108) (86 aa) fasta scores: E(): 3.1e-11, 45.57% id in 79 aa, and to Ralstonia solanacearum probable acyl-CoA-binding protein rsc1366 or rs04648 SWALL:Q8XZM9 (EMBL:AL646064) (105 aa) fasta scores: E(): 1.2e-23, 66.29% id in 89 aa; acyl-CoA-binding protein 2624009..2624278 Burkholderia pseudomallei K96243 3093962 YP_108782.1 CDS BPSL2187 NC_006350.1 2624724 2626274 D Similar to Escherichia coli ATP-dependent RNA helicase RhlE or b0797 SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): 1e-39, 43.29% id in 455 aa, and to Ralstonia solanacearum ATP-dependent RNA helicase rsc0952 or rs04426 SWALL:Q8Y0U1 (EMBL:AL646061) (608 aa) fasta scores: E(): 3.9e-74, 58.07% id in 458 aa. CDS is extended at the N-terminus in comparison to orthologues; ATP-dependent RNA helicase 2624724..2626274 Burkholderia pseudomallei K96243 3093963 YP_108783.1 CDS aceA NC_006350.1 2626666 2627973 D Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 2626666..2627973 Burkholderia pseudomallei K96243 3092651 YP_108784.1 CDS BPSL2189 NC_006350.1 2628233 2628667 R Similar to Ralstonia solanacearum hypothetical protein rsp1159 or rs05426 SWALL:Q8XQR2 (EMBL:AL646083) (146 aa) fasta scores: E(): 2.1e-22, 50% id in 146 aa, and to Brucella melitensis universal stress protein family bmei0102 SWALL:Q8YJI1 (EMBL:AE009453) (149 aa) fasta scores: E(): 3.5e-13, 37.58% id in 149 aa; universal stress protein family protein complement(2628233..2628667) Burkholderia pseudomallei K96243 3092701 YP_108785.1 CDS BPSL2190 NC_006350.1 2628947 2629849 R Similar to Escherichia coli hypothetical transcriptional regulator YeaT or b1799 SWALL:YEAT_ECOLI (SWALL:P76250) (307 aa) fasta scores: E(): 2.8e-33, 35.51% id in 290 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1360 or rs04642 SWALL:Q8XZN5 (EMBL:AL646064) (309 aa) fasta scores: E(): 9.6e-97, 78.93% id in 299 aa; LysR family regulatory protein complement(2628947..2629849) Burkholderia pseudomallei K96243 3092702 YP_108786.1 CDS BPSL2191 NC_006350.1 2630009 2630791 D Similar to Ralstonia solanacearum 2-haloalkanoic acid dehalogenase rsc1362 or rs04644 SWALL:Q8XZN3 (EMBL:AL646064) (233 aa) fasta scores: E(): 2.6e-49, 61.94% id in 226 aa, and to Pseudomonas sp. 2-haloalkanoic acid dehalogenase SWALL:HAD_PSESP (SWALL:Q53464) (232 aa) fasta scores: E(): 1.1e-30, 44.06% id in 236 aa; dehalogenase 2630009..2630791 Burkholderia pseudomallei K96243 3093354 YP_108787.1 CDS aceB NC_006350.1 2630844 2632436 D Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 2630844..2632436 Burkholderia pseudomallei K96243 3092656 YP_108788.1 CDS BPSL2193 NC_006350.1 2633033 2633440 R Similar to Ralstonia solanacearum hypothetical protein rsc1355 or rs04637 SWALL:Q8XZP0 (EMBL:AL646064) (137 aa) fasta scores: E(): 1.1e-22, 54.96% id in 131 aa, and to Sulfolobus solfataricus hypothetical protein sso2192 SWALL:Q97WM2 (EMBL:AE006825) (276 aa) fasta scores: E(): 1.9e-09, 36.92% id in 130 aa; hypothetical protein complement(2633033..2633440) Burkholderia pseudomallei K96243 3093355 YP_108789.1 CDS menG NC_006350.1 2633488 2633985 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(2633488..2633985) Burkholderia pseudomallei K96243 3093172 YP_108790.1 CDS BPSL2195 NC_006350.1 2634115 2634978 D Similar to Ralstonia solanacearum probable transcription regulator protein rsc3062 or rs00506 SWALL:Q8XUX1 (EMBL:AL646073) (268 aa) fasta scores: E(): 5.5e-56, 60.15% id in 251 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3927 SWALL:Q9HX87 (EMBL:AE004810) (262 aa) fasta scores: E(): 4.3e-36, 43.47% id in 230 aa; AraC family transcriptional regulator 2634115..2634978 Burkholderia pseudomallei K96243 3093293 YP_108791.1 CDS BPSL2196 NC_006350.1 2635582 2636049 R Low similarity to Vibrio cholerae acetyltransferase, vca0402 SWALL:Q9KMF8 (EMBL:AE004375) (172 aa) fasta scores: E(): 8.1e-12, 39.31% id in 117 aa; acetyltransferase complement(2635582..2636049) Burkholderia pseudomallei K96243 3093294 YP_108792.1 CDS gltX NC_006350.1 2637135 2638544 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2637135..2638544) Burkholderia pseudomallei K96243 3093847 YP_108793.1 CDS BPSL2198 NC_006350.1 2639117 2640052 D Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1178 or rs04543 SWALL:Q8Y066 (EMBL:AL646063) (319 aa) fasta scores: E(): 2.2e-55, 55.09% id in 314 aa, and to Xanthomonas axonopodis hypothetical protein xac0177 SWALL:AAM35069 (EMBL:AE011642) (345 aa) fasta scores: E(): 9.1e-49, 49.83% id in 303 aa; exported phospholipase 2639117..2640052 Burkholderia pseudomallei K96243 3093563 YP_108794.1 CDS BPSL2199 NC_006350.1 2640218 2640919 R Similar to Ralstonia solanacearum transmembrane protein rsc1177 or rs04548 SWALL:Q8Y067 (EMBL:AL646063) (222 aa) fasta scores: E(): 5.6e-32, 52.45% id in 204 aa, and to Neisseria meningitidis outer membrane protein precursor gna2001 SWALL:Q9JPN6 (EMBL:AF226478) (222 aa) fasta scores: E(): 9.3e-19, 34.8% id in 204 aa; peptidase complement(2640218..2640919) Burkholderia pseudomallei K96243 3093564 YP_108795.1 CDS BPSL2200 NC_006350.1 2641055 2642704 R Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YejF or b2180 SWALL:YEJF_ECOLI (SWALL:P33916) (529 aa) fasta scores: E(): 3.7e-79, 51.03% id in 533 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1176 or rs04549 SWALL:Q8Y068 (EMBL:AL646063) (551 aa) fasta scores: E(): 3.2e-109, 65.23% id in 535 aa; ABC transporter ATP-binding protein complement(2641055..2642704) Burkholderia pseudomallei K96243 3092765 YP_108796.1 CDS BPSL2201 NC_006350.1 2642701 2643798 R Similar to Escherichia coli hypothetical ABC transporter permease YejE or b2179 SWALL:YEJE_ECOLI (SWALL:P33915) (341 aa) fasta scores: E(): 9.3e-68, 50.74% id in 337 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1175 or rs04550 SWALL:Q8Y069 (EMBL:AL646063) (374 aa) fasta scores: E(): 1.8e-98, 70.78% id in 356 aa; ABBC transport system, membrane protein complement(2642701..2643798) Burkholderia pseudomallei K96243 3092766 YP_108797.1 CDS BPSL2202 NC_006350.1 2643800 2644840 R Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter permease YejB or b2178 or z3437 or ecs3070 SWALL:YEJB_ECOLI (SWALL:P33914) (364 aa) fasta scores: E(): 3.6e-65, 53.86% id in 362 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1174 or rs04551 SWALL:Q8Y070 (EMBL:AL646063) (351 aa) fasta scores: E(): 6.7e-98, 72.93% id in 351 aa; ABC transporter membrane protein complement(2643800..2644840) Burkholderia pseudomallei K96243 3092316 YP_108798.1 CDS BPSL2203 NC_006350.1 2645029 2646981 R Similar to Escherichia coli hypothetical protein precursor YejA or b2177 SWALL:YEJA_ECOLI (SWALL:P33913) (604 aa) fasta scores: E(): 7.1e-60, 38.03% id in 589 aa, and to Ralstonia solanacearum probable substrate-binding periplasmic rsc1173 or rs04555 SWALL:Q8Y071 (EMBL:AL646063) (625 aa) fasta scores: E(): 9e-140, 60.42% id in 619 aa. Note: This CDS has a possible alternative start codon at residue 84; ABC transporter substrate-binding protein complement(2645029..2646981) Burkholderia pseudomallei K96243 3092317 YP_108799.1 CDS fabI NC_006350.1 2647102 2647893 D NADH; Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 2647102..2647893 Burkholderia pseudomallei K96243 3091461 YP_108800.1 CDS BPSL2205 NC_006350.1 2648146 2648499 R Similar to Ralstonia solanacearum probable signal peptide protein rsc2910 or rs00185 SWALL:Q8XVC1 (EMBL:AL646072) (105 aa) fasta scores: E(): 5.4e-12, 57.69% id in 104 aa, and to Bordetella pertussis Vrg-6 SWALL:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 1.8e-09, 49.55% id in 113 aa; hypothetical protein complement(2648146..2648499) Burkholderia pseudomallei K96243 3094715 YP_108801.1 CDS BPSL2206 NC_006350.1 2648753 2648974 D hypothetical protein 2648753..2648974 Burkholderia pseudomallei K96243 3094716 YP_108802.1 CDS BPSL2207 NC_006350.1 2649224 2651545 R Similar to Mycobacterium tuberculosis hypothetical protein rv0197 or mtv033.05 SWALL:O53648 (EMBL:AL021928) (762 aa) fasta scores: E(): 5.8e-57, 44.79% id in 768 aa, and to Klebsiella pneumoniae nitrate reductase NasA SWALL:NASA_KLEPN (SWALL:Q06457) (866 aa) fasta scores: E(): 7.7e-22, 27.12% id in 505 aa; molybdopterin oxidoreductase complement(2649224..2651545) Burkholderia pseudomallei K96243 3092493 YP_108803.1 CDS fpr NC_006350.1 2652050 2652823 R Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SWALL:FENR_AZOVI (SWALL:Q44532) (257 aa) fasta scores: E(): 2.2e-66, 65.47% id in 252 aa, and to Escherichia coli ferredoxin--NADP reductase Fpr or MvrA or b3924 SWALL:FENR_ECOLI (SWALL:P28861) (247 aa) fasta scores: E(): 1.8e-24, 36.99% id in 246 aa; ferredoxin-NADP reductase complement(2652050..2652823) Burkholderia pseudomallei K96243 3091922 YP_108804.1 CDS BPSL2209 NC_006350.1 2652831 2653820 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(2652831..2653820) Burkholderia pseudomallei K96243 3092494 YP_108805.1 CDS fdxA NC_006350.1 2653904 2654242 R Similar to Azotobacter vinelandii ferredoxin I FdxA SWALL:FER1_AZOVI (SWALL:P00214) (106 aa) fasta scores: E(): 1.2e-25, 63.55% id in 107 aa, and to Ralstonia solanacearum probable ferredoxin protein rsp0807 or rs01900 SWALL:Q8XRM4 (EMBL:AL646081) (112 aa) fasta scores: E(): 1.1e-27, 64.07% id in 103 aa; ferredoxin I complement(2653904..2654242) Burkholderia pseudomallei K96243 3092480 YP_108806.1 CDS BPSL2211 NC_006350.1 2654721 2655287 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2766 SWALL:Q9I077 (EMBL:AE004704) (193 aa) fasta scores: E(): 3.9e-26, 46.32% id in 177 aa, and to Rhizobium loti probable transcriptional regulator mlr2120 SWALL:Q98J38 (EMBL:AP002999) (195 aa) fasta scores: E(): 4e-11, 32.77% id in 180 aa; TetR family regulatory protein 2654721..2655287 Burkholderia pseudomallei K96243 3094386 YP_108807.1 CDS map2 NC_006350.1 2655361 2656179 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 methionine aminopeptidase Map or b0168 or c0203 or z0178 or ecs0170 SWALL:AMPM_ECOLI (SWALL:P07906) (264 aa) fasta scores: E(): 1.1e-51, 53.9% id in 256 aa, and to Yersinia pestis methionine aminopeptidase Map or ypo3337 SWALL:Q8ZBR7 (EMBL:AJ414156) (261 aa) fasta scores: E(): 9.4e-69, 67.45% id in 252 aa. Note: Also similar to BPSL2160, map (272 aa) fasta scores: E(): 6.7e-52, 52.963% identity in 270 aa overlap; methionine aminopeptidase 2 complement(2655361..2656179) Burkholderia pseudomallei K96243 3094065 YP_108808.1 CDS BPSL2213 NC_006350.1 2656179 2656403 R Similar to Chromobacterium violaceum hypothetical protein cv2333 SWALL:Q7NVK9 (EMBL:AE016918) (75 aa) fasta scores: E(): 2.2e-14, 61.33% id in 75 aa, and to Pseudomonas syringae conserved domain protein pspto2361 SWALL:Q883J6 (EMBL:AE016864) (76 aa) fasta scores: E(): 2.6e-13, 73.58% id in 53 aa. Possible alternative translational start site; hypothetical protein complement(2656179..2656403) Burkholderia pseudomallei K96243 3094387 YP_108809.1 CDS BPSL2214 NC_006350.1 2656629 2659325 R Similar to Rhizobium loti fusion protein contains ligase and probable arginosuccinate lyase msi203 SWALL:CAD31608 (EMBL:AL672113) (899 aa) fasta scores: E(): 7.9e-99, 38.19% id in 906 aa, N-terminal region to Rhizobium loti ligase/carboxylase msi201 SWALL:CAD31606 (EMBL:AL672113) (425 aa) fasta scores: E(): 5.4e-25, 31.08% id in 415 aa and C-terminal region to Rhizobium loti argininosuccinate lyase mll9226 SWALL:Q981V0 (EMBL:AP003015) (927 aa) fasta scores: E(): 4.4e-94, 37.19% id in 898 aa; argininosuccinate lyase complement(2656629..2659325) Burkholderia pseudomallei K96243 3091920 YP_108810.1 CDS BPSL2215 NC_006350.1 2659405 2660469 R Similar to Alcaligenes eutrophus cysteine synthase CysM SWALL:CYSM_ALCEU (SWALL:Q44004) (339 aa) fasta scores: E(): 1.1e-17, 32.99% id in 291 aa, and to Rhizobium loti cysteine synthase msi204 SWALL:CAD31609 (EMBL:AL672113) (355 aa) fasta scores: E(): 1.1e-47, 44.27% id in 332 aa; cysteine synthesis-like protein complement(2659405..2660469) Burkholderia pseudomallei K96243 3091921 YP_108811.1 CDS BPSL2216 NC_006350.1 2660474 2661673 R Similar to Rhizobium loti hypothetical protein mll9228 SWALL:Q981U8 (EMBL:AP003015) (329 aa) fasta scores: E(): 7.6e-27, 38.35% id in 279 aa, and to Bacillus thuringiensis possible kinase pbt101 SWALL:CAD30141 (EMBL:AL731825) (299 aa) fasta scores: E(): 5.4e-22, 34.74% id in 259 aa; hypothetical protein complement(2660474..2661673) Burkholderia pseudomallei K96243 3092791 YP_108812.1 CDS BPSL2217 NC_006350.1 2661696 2662661 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2661696..2662661) Burkholderia pseudomallei K96243 3092792 YP_108813.1 CDS BPSL2218 NC_006350.1 2662817 2663635 R hypothetical protein complement(2662817..2663635) Burkholderia pseudomallei K96243 3094433 YP_108814.1 CDS BPSL2219 NC_006350.1 2663718 2664812 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(2663718..2664812) Burkholderia pseudomallei K96243 3094434 YP_108815.1 CDS BPSL2220 NC_006350.1 2664853 2665980 R Similar to Rhizobium loti probable lipopolysaccharide modification acyltransferase mlr0739 SWALL:Q98M44 (EMBL:AP002995) (375 aa) fasta scores: E(): 1.7e-14, 25.84% id in 387 aa, and to Pseudomonas aeruginosa probable O-antigen acetylase pa5238 SWALL:Q9HTV2 (EMBL:AE004936) (662 aa) fasta scores: E(): 6.1e-13, 32.28% id in 381 aa; hypothetical protein complement(2664853..2665980) Burkholderia pseudomallei K96243 3092251 YP_108816.1 CDS BPSL2221 NC_006350.1 2666032 2667186 R hypothetical protein complement(2666032..2667186) Burkholderia pseudomallei K96243 3092252 YP_108817.1 CDS BPSL2222 NC_006350.1 2667189 2668100 R Similar to Thermoplasma acidophilum probable transketolase ta0617 SWALL:Q9HKI2 (EMBL:AL445064) (316 aa) fasta scores: E(): 2.6e-24, 32.67% id in 303 aa, and to Pyrococcus abyssi transketolase C-terminal section Tkt2 or pab0296 SWALL:Q9V1I1 (EMBL:AJ248284) (317 aa) fasta scores: E(): 9.6e-22, 32.65% id in 294 aa; transketolase complement(2667189..2668100) Burkholderia pseudomallei K96243 3094411 YP_108818.1 CDS BPSL2223 NC_006350.1 2668097 2668936 R Similar to Fusobacterium nucleatum transketolase subunit A fn0294 SWALL:Q8RGJ9 (EMBL:AE010542) (270 aa) fasta scores: E(): 2.2e-33, 42.53% id in 268 aa, and to Methanococcus jannaschii transketolase N-terminal section mj0681 SWALL:TKTN_METJA (SWALL:Q58094) (274 aa) fasta scores: E(): 2.5e-29, 38.62% id in 277 aa; transketolase complement(2668097..2668936) Burkholderia pseudomallei K96243 3094412 YP_108819.1 CDS BPSL2224 NC_006350.1 2668941 2669975 R hypothetical protein complement(2668941..2669975) Burkholderia pseudomallei K96243 3094717 YP_108820.1 CDS BPSL2225 NC_006350.1 2670023 2670802 R hypothetical protein complement(2670023..2670802) Burkholderia pseudomallei K96243 3094718 YP_108821.1 CDS BPSL2226 NC_006350.1 2670822 2671670 R hypothetical protein complement(2670822..2671670) Burkholderia pseudomallei K96243 3094828 YP_108822.1 CDS BPSL2227 NC_006350.1 2671740 2672618 R Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiS or b0368 SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 1.6e-30, 35.58% id in 281 aa, and to Streptomyces coelicolor dioxygenase sco7507 or scbac17a6.40C SWALL:Q93J90 (EMBL:AL596248) (315 aa) fasta scores: E(): 8.6e-36, 41.28% id in 281 aa; sulfur metabolism-like protein complement(2671740..2672618) Burkholderia pseudomallei K96243 3094829 YP_108823.1 CDS BPSL2228 NC_006350.1 2672623 2673420 R Very low similarity to Bacillus halodurans hypothetical protein bh3371 SWALL:Q9K7J0 (EMBL:AP001518) (255 aa) fasta scores: E(): 4.5e-06, 25.41% id in 244 aa; hypothetical protein complement(2672623..2673420) Burkholderia pseudomallei K96243 3091821 YP_108824.1 CDS BPSL2229 NC_006350.1 2673417 2682440 R Similar to Pseudomonas putida siderophore non-ribosomal peptide synthetase PpsD SWALL:Q9AKS6 (EMBL:AJ310530) (2246 aa) fasta scores: E(): 4.8e-102, 28.54% id in 2659 aa, and to the C-terminal region of Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 1.5e-94, 27.02% id in 3648 aa; siderophore non-ribosomal peptide synthase complement(2673417..2682440) Burkholderia pseudomallei K96243 3091822 YP_108825.1 CDS BPSL2230 NC_006350.1 2682440 2683840 R Similar to Agrobacterium tumefaciens hypothetical protein atu3925 or agr_l_1841 SWALL:Q8U905 (EMBL:AE009323) (462 aa) fasta scores: E(): 6.5e-41, 33.47% id in 454 aa, and to Xanthomonas campestris hypothetical protein xcc4027 SWALL:AAM43248 (EMBL:AE012524) (463 aa) fasta scores: E(): 2.6e-40, 36.55% id in 465 aa; hypothetical protein complement(2682440..2683840) Burkholderia pseudomallei K96243 3093108 YP_108826.1 CDS BPSL2231 NC_006350.1 2684134 2685435 R Similar to Rhizobium meliloti transport transmembrane protein r00235 or smc02910 SWALL:Q92SW7 (EMBL:AL591783) (551 aa) fasta scores: E(): 2e-53, 42.99% id in 407 aa, and to Agrobacterium tumefaciens MFS permease atu0091 or agr_c_139 SWALL:Q8UJ47 (EMBL:AE008983) (542 aa) fasta scores: E(): 2.2e-51, 40.24% id in 410 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein complement(2684134..2685435) Burkholderia pseudomallei K96243 3093109 YP_108827.1 CDS BPSL2232 NC_006350.1 2685503 2687395 R Similar to the C-terminal region of Ralstonia solanacearum probable peptide synthetase rsp0641 or rs05860 SWALL:Q8XS40 (EMBL:AL646079) (6889 aa) fasta scores: E(): 3.1e-51, 36.47% id in 584 aa, and to the N-terminal region of Agrobacterium tumefaciens peptide synthetase atu3072 or agr_l_3476 SWALL:Q8UBE4 (EMBL:AE009238) (1344 aa) fasta scores: E(): 2.1e-50, 36.73% id in 569 aa; non-ribosomal peptide synthase complement(2685503..2687395) Burkholderia pseudomallei K96243 3093087 YP_108828.1 CDS BPSL2233 NC_006350.1 2687392 2688891 R Similar to the C-terminal region of Xylella fastidiosa CysN/CysC bifunctional enzyme CysNC or xf1501 SWALL:CYSN_XYLFA (SWALL:Q9PD78) (623 aa) fasta scores: E(): 9.4e-26, 52.19% id in 205 aa, and to in its C-terminal region similar to the full length of Escherichia coli, and Escherichia coli O157:H7 adenylylsulfate kinase CysC or b2750 or z4058 or ecs3604 SWALL:CYSC_ECOLI (SWALL:P23846) (200 aa) fasta scores: E(): 3.4e-23, 49.7% id in 167 aa; adenylylsulfate kinase complement(2687392..2688891) Burkholderia pseudomallei K96243 3093088 YP_108829.1 CDS BPSL2234 NC_006350.1 2690294 2691574 D Similar to Escherichia coli hypothetical protein precursor YegM or b2074 SWALL:YEGM_ECOLI (SWALL:P76397) (415 aa) fasta scores: E(): 2.5e-37, 36.29% id in 405 aa, and to Rhizobium loti RND efflux membrane fusion protein mll5780 SWALL:Q98B05 (EMBL:AP003007) (417 aa) fasta scores: E(): 1.5e-35, 34.54% id in 414 aa; hypothetical protein 2690294..2691574 Burkholderia pseudomallei K96243 3093295 YP_108830.1 CDS BPSL2235 NC_006350.1 2691571 2694717 D Weakly similar to Escherichia coli probable aminoglycoside efflux pump AcrD or b2470 SWALL:ACRD_ECOLI (SWALL:P24177) (1037 aa) fasta scores: E(): 8.3e-76, 28.27% id in 1054 aa. Similar to Rhizobium loti Rnd efflux transporter mll5779 SWALL:Q98B06 (EMBL:AP003007) (1038 aa) fasta scores: E(): 1.9e-187, 51.79% id in 1029 aa; AcrB/AcrD/AcrF family membrane protein 2691571..2694717 Burkholderia pseudomallei K96243 3093296 YP_108831.1 CDS BPSL2236 NC_006350.1 2694795 2696015 D Similar to Streptomyces coelicolor integral membrane efflux protein sco1892 or sci7.10 SWALL:Q9X9Y0 (EMBL:AL096743) (415 aa) fasta scores: E(): 9.9e-07, 28.76% id in 379 aa, and to Thermotoga maritima permease, tm1336 SWALL:Q9X158 (EMBL:AE001788) (390 aa) fasta scores: E(): 6e-05, 19.3% id in 373 aa; hypothetical protein 2694795..2696015 Burkholderia pseudomallei K96243 3092819 YP_108832.1 CDS BPSL2237 NC_006350.1 2696054 2697886 R Similar to Xanthomonas campestris lipase/esterase EstA or xcc3148 SWALL:Q8P634 (EMBL:AE012430) (594 aa) fasta scores: E(): 7e-14, 23.28% id in 627 aa, and to Xylella fastidiosa lipase/esterase xf0781 SWALL:Q9PF97 (EMBL:AE003919) (597 aa) fasta scores: E(): 1.3e-10, 23.29% id in 631 aa; exported lipase complement(2696054..2697886) Burkholderia pseudomallei K96243 3092820 YP_108833.1 CDS BPSL2238 NC_006350.1 2698089 2699135 R Similar to Vibrio cholerae hypothetical protein vc0334 SWALL:Q9KV24 (EMBL:AE004122) (319 aa) fasta scores: E(): 1.8e-36, 38.48% id in 317 aa; hypothetical protein complement(2698089..2699135) Burkholderia pseudomallei K96243 3092664 YP_108834.1 CDS ask NC_006350.1 2700393 2701643 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(2700393..2701643) Burkholderia pseudomallei K96243 3094028 YP_108835.1 CDS BPSL2240 NC_006350.1 2701984 2703453 R Similar to Escherichia coli cell cycle protein MesJ or b0188 SWALL:MESJ_ECOLI (SWALL:P52097) (432 aa) fasta scores: E(): 1.2e-30, 35.79% id in 447 aa, and to Ralstonia solanacearum cell cycle protein rsc1170 or rs04559 SWALL:Q8Y074 (EMBL:AL646063) (462 aa) fasta scores: E(): 1.7e-42, 43.91% id in 485 aa; cell cycle protein complement(2701984..2703453) Burkholderia pseudomallei K96243 3092665 YP_108836.1 CDS accA NC_006350.1 2703497 2704468 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2703497..2704468) Burkholderia pseudomallei K96243 3092968 YP_108837.1 CDS BPSL2242 NC_006350.1 2704572 2705510 R Similar to Ralstonia solanacearum hypothetical protein rsc1168 or rs04576 SWALL:Q8Y076 (EMBL:AL646063) (291 aa) fasta scores: E(): 1.1e-56, 62.62% id in 313 aa, and to Deinococcus radiodurans DNA-3-methyladenine glycosidase II, dr2584 SWALL:Q9RRB0 (EMBL:AE002087) (225 aa) fasta scores: E(): 6.8e-15, 37.2% id in 215 aa; HhH-GPD superfamily base excision DNA repair protein complement(2704572..2705510) Burkholderia pseudomallei K96243 3093297 YP_108838.1 CDS cysS NC_006350.1 2705558 2706955 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2705558..2706955) Burkholderia pseudomallei K96243 3093095 YP_108839.1 CDS BPSL2244 NC_006350.1 2707244 2707909 D Low similarity to Ralstonia solanacearum probable signal peptide protein rsc1166 or rs04578 SWALL:Q8Y078 (EMBL:AL646063) (219 aa) fasta scores: E(): 5.3e-19, 44.62% id in 186 aa; hypothetical protein 2707244..2707909 Burkholderia pseudomallei K96243 3093298 YP_108840.1 CDS ppiA NC_006350.1 2707966 2708541 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 peptidyl-prolyl cis-trans isomerase A precursor PpiA or RotA or Rot or b3363 or c4138 or z4724 or ecs4214 SWALL:PPIA_ECOLI (SWALL:P20752) (190 aa) fasta scores: E(): 1.1e-30, 53.43% id in 189 aa, and to Ralstonia solanacearum probable peptidyl-prolyl cis-trans isomerase A rsc1165 or rs04579 SWALL:Q8Y079 (EMBL:AL646063) (190 aa) fasta scores: E(): 7.5e-37, 60.45% id in 177 aa. Note This CDS is also highly similar to the downstream CDS, BPSL2246 (164 aa) fasta scores: E(): 8.3e-33, 60.736% identity in 163 aa overlap; peptidyl-prolyl cis-trans isomerase A 2707966..2708541 Burkholderia pseudomallei K96243 3094185 YP_108841.1 CDS ppiB NC_006350.1 2708622 2709113 D Similar to Escherichia coli peptidyl-prolyl cis-trans isomerase B PpiB or b0525 SWALL:PPIB_ECOLI (SWALL:P23869) (164 aa) fasta scores: E(): 1.9e-41, 66.66% id in 162 aa, and to Pseudomonas aeruginosa peptidyl-prolyl cis-trans isomerase B pa1793 SWALL:Q9I2U9 (EMBL:AE004605) (165 aa) fasta scores: E(): 3e-47, 72.39% id in 163 aa. Note: This CDS is higly similar to the upstream CDS, BPSL2245 (192 aa) fasta scores: E(): 9.4e-36, 60.736% identity in 163 aa overlap; peptidyl-prolyl cis-trans isomerase B 2708622..2709113 Burkholderia pseudomallei K96243 3094186 YP_108842.1 CDS BPSL2247 NC_006350.1 2709177 2709938 D catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 2709177..2709938 Burkholderia pseudomallei K96243 3094136 YP_108843.1 CDS BPSL2248 NC_006350.1 2710271 2711056 R Similar to Bacillus subtilis serine acetyltransferase CysE or CysA SWALL:CYSE_BACSU (SWALL:Q06750) (217 aa) fasta scores: E(): 4.3e-31, 57.89% id in 171 aa, and to Pseudomonas aeruginosa O-acetylserine synthase pa3816 SWALL:Q9HXI6 (EMBL:AE004799) (258 aa) fasta scores: E(): 1.7e-46, 56.92% id in 267 aa; serine acetyltransferase complement(2710271..2711056) Burkholderia pseudomallei K96243 3094137 YP_108844.1 CDS BPSL2249 NC_006350.1 2711247 2712158 R Similar to Escherichia coli, and Escherichia coli O6 hypothetical tRNA/rRNA methyltransferase YfhQ or b2532 or c3058 SWALL:YFHQ_ECOLI (SWALL:P77438) (246 aa) fasta scores: E(): 2.8e-30, 44.03% id in 243 aa, and to Ralstonia solanacearum tRNA/rRNA methyltransferase rsc1161 or rs04590 SWALL:Q8Y083 (EMBL:AL646063) (287 aa) fasta scores: E(): 5.7e-47, 55.47% id in 283 aa; tRNA/rRNA methyltransferase complement(2711247..2712158) Burkholderia pseudomallei K96243 3093206 YP_108845.1 CDS suhB NC_006350.1 2712459 2713262 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 inositol-1-monophosphatase SuhB or SsyA SWALL:SUHB_ECOLI (SWALL:P22783) (267 aa) fasta scores: E(): 1.7e-47, 51.96% id in 254 aa, and to Ralstonia solanacearum probable inositol monophosphatase rsc1160 or rs04755 SWALL:Q8Y084 (EMBL:AL646063) (270 aa) fasta scores: E(): 2.7e-70, 68.16% id in 267 aa; inositol monophosphatase 2712459..2713262 Burkholderia pseudomallei K96243 3092894 YP_108846.1 CDS BPSL2251 NC_006350.1 2713542 2713814 R Similar to Escherichia coli shiga-like toxin IIe variant B subunit SWALL:P71294 (EMBL:U72191) (87 aa) fasta scores: E(): 1, 29.54% id in 88 aa; hypothetical protein complement(2713542..2713814) Burkholderia pseudomallei K96243 3093207 YP_108847.1 CDS mutS NC_006350.1 2715154 2717826 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2715154..2717826 Burkholderia pseudomallei K96243 3094284 YP_108848.1 CDS BPSL2253 NC_006350.1 2717813 2719111 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1150 or rs04601 SWALL:Q8Y094 (EMBL:AL646063) (354 aa) fasta scores: E(): 4.6e-33, 36.13% id in 357 aa. CDS is extended at the C-terminus in comparison to R. solanacearum protein; hypothetical protein 2717813..2719111 Burkholderia pseudomallei K96243 3091961 YP_108849.1 CDS BPSL2254 NC_006350.1 2719091 2719636 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 FkbP-type peptidyl-prolyl cis-trans isomerase SlyD SWALL:SLYD_ECOLI (SWALL:P30856) (196 aa) fasta scores: E(): 1.3e-16, 38.41% id in 177 aa, and to Ralstonia solanacearum probable FkbP-type peptidyl-prolyl cis-trans isomerase rsc1149 or rs04602 SWALL:Q8Y095 (EMBL:AL646063) (174 aa) fasta scores: E(): 7.1e-50, 77.34% id in 181 aa; FkbP-type peptidyl-prolyl cis-trans isomerase complement(2719091..2719636) Burkholderia pseudomallei K96243 3091962 YP_108850.1 CDS BPSL2255 NC_006350.1 2719729 2720892 D Similar to Ralstonia solanacearum hypothetical protein rsc1148 or rs04604 SWALL:Q8Y096 (EMBL:AL646063) (409 aa) fasta scores: E(): 3.9e-79, 52.17% id in 391 aa, and to Salmonella typhimurium cytoplasmic protein stm1229 SWALL:Q8ZPZ7 (EMBL:AE008753) (373 aa) fasta scores: E(): 5.6e-39, 35.5% id in 383 aa. Possible alternative translational start site; hypothetical protein 2719729..2720892 Burkholderia pseudomallei K96243 3092468 YP_108851.1 CDS BPSL2255A NC_006350.1 2721124 2721378 D Similar to Neisseria gonorrhoeae outer membrane protein H.8 precursor SWALL:H82_NEIGO (SWALL:P11910) (88 aa) fasta scores: E(): 0.023, 43.9% id in 82 aa, and to Acinetobacter sp. hypothetical protein SWALL:Q6F875 (EMBL:CR543861) (88 aa) fasta scores: E(): 0.011, 47.56% id in 82 aa; lipoprotein 2721124..2721378 Burkholderia pseudomallei K96243 3092469 YP_108852.1 CDS BPSL2256 NC_006350.1 2721619 2722395 R Similar to Ralstonia solanacearum hypothetical protein rsc1147 or rs04606 SWALL:Q8Y097 (EMBL:AL646062) (261 aa) fasta scores: E(): 8.7e-53, 58.91% id in 258 aa, and to Pseudomonas aeruginosa hypothetical protein pa1012 SWALL:Q9I4W1 (EMBL:AE004533) (252 aa) fasta scores: E(): 6.8e-38, 46.85% id in 254 aa; hypothetical protein complement(2721619..2722395) Burkholderia pseudomallei K96243 3092579 YP_108853.1 CDS BPSL2257 NC_006350.1 2722400 2723542 R Similar to Escherichia coli lipoprotein-34 precursor NlpB or DapX SWALL:NLPB_ECOLI (SWALL:P21167) (344 aa) fasta scores: E(): 0.11, 23.29% id in 395 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1146 or rs04607 SWALL:Q8Y098 (EMBL:AL646062) (398 aa) fasta scores: E(): 4.9e-35, 42.21% id in 398 aa; lipoprotein complement(2722400..2723542) Burkholderia pseudomallei K96243 3092580 YP_108854.1 CDS dapA NC_006350.1 2723653 2724555 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(2723653..2724555) Burkholderia pseudomallei K96243 3094346 YP_108855.1 CDS BPSL2259 NC_006350.1 2724600 2725217 R Similar to Ralstonia solanacearum hypothetical protein rsc1144 or rs04609 SWALL:Q8Y0A0 (EMBL:AL646062) (190 aa) fasta scores: E(): 1.1e-37, 61.08% id in 185 aa; hypothetical protein complement(2724600..2725217) Burkholderia pseudomallei K96243 3093615 YP_108856.1 CDS BPSL2260 NC_006350.1 2725214 2726416 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(2725214..2726416) Burkholderia pseudomallei K96243 3093616 YP_108857.1 CDS BPSL2261 NC_006350.1 2726425 2727090 R Similar to Ralstonia solanacearum probable integral membrane transmembrane protein rsc1142 or rs04611 SWALL:Q8Y0A2 (EMBL:AL646062) (225 aa) fasta scores: E(): 9.8e-49, 56.33% id in 213 aa, and to Neisseria meningitidis conserved hypothetical integral membrane protein nma1986 SWALL:Q9JT39 (EMBL:AL162757) (212 aa) fasta scores: E(): 1.6e-25, 40.67% id in 209 aa; hypothetical protein complement(2726425..2727090) Burkholderia pseudomallei K96243 3093628 YP_108858.1 CDS BPSL2262 NC_006350.1 2727189 2727818 R Similar to Ralstonia solanacearum hypothetical protein rsc1141 or rs04612 SWALL:Q8Y0A3 (EMBL:AL646062) (207 aa) fasta scores: E(): 7.5e-57, 70.53% id in 207 aa, and to Pseudomonas aeruginosa hypothetical protein pa3199 SWALL:Q9HZ41 (EMBL:AE004744) (209 aa) fasta scores: E(): 3.7e-47, 60.97% id in 205 aa; hypothetical protein complement(2727189..2727818) Burkholderia pseudomallei K96243 3093629 YP_108859.1 CDS BPSL2263 NC_006350.1 2727883 2728722 R Similar to Ralstonia solanacearum hypothetical protein rsc1140 or rs04613 SWALL:Q8Y0A4 (EMBL:AL646062) (286 aa) fasta scores: E(): 9.8e-76, 70.65% id in 276 aa, and to Neisseria meningitidis hypothetical protein nmb1824 SWALL:Q9JXZ5 (EMBL:AE002531) (278 aa) fasta scores: E(): 5.8e-44, 47.98% id in 273 aa; hypothetical protein complement(2727883..2728722) Burkholderia pseudomallei K96243 3094473 YP_108860.1 CDS BPSL2264 NC_006350.1 2728968 2729858 R Similar to Ralstonia solanacearum hydrolase rsc1135 or rs04618 SWALL:Q8Y0A9 (EMBL:AL646062) (307 aa) fasta scores: E(): 5e-79, 65.51% id in 290 aa, and to Xanthomonas campestris hydrolase xcc4096 SWALL:AAM43317 (EMBL:AE012532) (290 aa) fasta scores: E(): 2.8e-11, 30.99% id in 271 aa; hydrolase complement(2728968..2729858) Burkholderia pseudomallei K96243 3094474 YP_108861.1 CDS BPSL2265 NC_006350.1 2730013 2730864 R Similar to Ralstonia solanacearum hypothetical protein rsc1134 or rs04619 SWALL:Q8Y0B0 (EMBL:AL646062) (268 aa) fasta scores: E(): 1.1e-64, 67.8% id in 264 aa, and to Xanthomonas axonopodis hypothetical protein xac1033 SWALL:AAM35916 (EMBL:AE011733) (274 aa) fasta scores: E(): 8.7e-50, 52.69% id in 260 aa. Possible alternative translational start site; hypothetical protein complement(2730013..2730864) Burkholderia pseudomallei K96243 3092946 YP_108862.1 CDS BPSL2266 NC_006350.1 2731041 2731565 D Similar to Ralstonia solanacearum hypothetical protein rsc1133 or rs04620 SWALL:Q8Y0B1 (EMBL:AL646062) (175 aa) fasta scores: E(): 3.9e-46, 69.36% id in 173 aa, and to Caulobacter crescentus bacterial transferase cc2643 SWALL:Q9A526 (EMBL:AE005932) (176 aa) fasta scores: E(): 6e-33, 54.65% id in 161 aa; hypothetical protein 2731041..2731565 Burkholderia pseudomallei K96243 3092947 YP_108863.1 CDS BPSL2267 NC_006350.1 2731604 2732554 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 33 kDa chaperonin HslO SWALL:HSLO_ECOLI (SWALL:P45803) (292 aa) fasta scores: E(): 5.6e-13, 35.84% id in 318 aa, and to Ralstonia solanacearum redox regulated molecular chaperone heat-shock-like protein rsc1132 or rs04621 SWALL:Q8Y0B2 (EMBL:AL646062) (338 aa) fasta scores: E(): 2.1e-46, 57.35% id in 340 aa; Hsp33 chaperonin 2731604..2732554 Burkholderia pseudomallei K96243 3094227 YP_108864.1 CDS BPSL2268 NC_006350.1 2732638 2732985 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1131 or rs04622 SWALL:Q8Y0B3 (EMBL:AL646062) (137 aa) fasta scores: E(): 4.3e-08, 40% id in 130 aa. Possible alternative upstream translational start site; lipoprotein 2732638..2732985 Burkholderia pseudomallei K96243 3094228 YP_108865.1 CDS ftsB NC_006350.1 2733211 2733642 R forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB complement(2733211..2733642) Burkholderia pseudomallei K96243 3091612 YP_108866.1 CDS eno NC_006350.1 2733734 2735017 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2733734..2735017) Burkholderia pseudomallei K96243 3091594 YP_108867.1 CDS BPSL2271 NC_006350.1 2735121 2735975 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2735121..2735975) Burkholderia pseudomallei K96243 3091613 YP_108868.1 CDS pyrG NC_006350.1 2735972 2737633 R CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2735972..2737633) Burkholderia pseudomallei K96243 3091437 YP_108869.1 CDS BPSL2273 NC_006350.1 2737890 2738717 R Similar to Ralstonia solanacearum hydrolase rsc1125 or rs04628 SWALL:Q8Y0B9 (EMBL:AL646062) (273 aa) fasta scores: E(): 1.6e-63, 58.88% id in 270 aa. Weakly similar to the C-terminal region of Mus musculus monoglyceride lipase MGLL SWALL:O35678 (EMBL:AJ001118) (303 aa) fasta scores: E(): 0.015, 25.96% id in 285 aa; hypothetical protein complement(2737890..2738717) Burkholderia pseudomallei K96243 3092011 YP_108870.1 CDS BPSL2274 NC_006350.1 2738754 2741324 R C-terminal region is similar to Neisseria gonorrhoeae competence protein ComA SWALL:COMA_NEIGO (SWALL:P51973) (691 aa) fasta scores: E(): 3.6e-18, 35.73% id in 778 aa> Full length CDS is similar to Xanthomonas campestris DNA uptake/competence protein xcc2123 SWALL:AAM41408 (EMBL:AE012319) (796 aa) fasta scores: E(): 7.5e-29, 38.66% id in 869 aa; hypothetical protein complement(2738754..2741324) Burkholderia pseudomallei K96243 3092012 YP_108871.1 CDS BPSL2275 NC_006350.1 2741335 2742123 R Similar to Ralstonia solanacearum probable deoxyribonuclease rsc1119 or rs04635 SWALL:Q8Y0C5 (EMBL:AL646062) (271 aa) fasta scores: E(): 1.3e-56, 58.64% id in 266 aa, and to Xanthomonas campestris hypothetical protein xcc1426 SWALL:AAM40723 (EMBL:AE012242) (255 aa) fasta scores: E(): 4.4e-33, 41.17% id in 255 aa; TatD related DNase complement(2741335..2742123) Burkholderia pseudomallei K96243 3093213 YP_108872.1 CDS lolD NC_006350.1 2742128 2742850 R Similar to Escherichia coli lipoprotein releasing system ATP-binding protein LolD SWALL:LOLD_ECOLI (SWALL:P75957) (233 aa) fasta scores: E(): 4.5e-38, 56.75% id in 222 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa2987 SWALL:Q9HZL7 (EMBL:AE004724) (227 aa) fasta scores: E(): 6.6e-41, 62.55% id in 219 aa; lipoprotein releasing system ATP-binding protein complement(2742128..2742850) Burkholderia pseudomallei K96243 3091587 YP_108873.1 CDS BPSL2277 NC_006350.1 2742870 2744123 R Similar to Escherichia coli lipoprotein releasing system transmembrane protein LolE SWALL:LOLE_ECOLI (SWALL:P75958) (413 aa) fasta scores: E(): 1.3e-42, 34.54% id in 414 aa, and to Ralstonia solanacearum probable lipoprotein releasing system transmembrane rsc1117 or rs05757 SWALL:Q8Y0C7 (EMBL:AL646062) (416 aa) fasta scores: E(): 1.4e-112, 71.46% id in 417 aa; lipoprotein releasing system transmembrane protein complement(2742870..2744123) Burkholderia pseudomallei K96243 3093214 YP_108874.1 CDS BPSL2278 NC_006350.1 2744691 2745767 D Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc1116 or rs05756 SWALL:Q8Y0C8 (EMBL:AL646062) (359 aa) fasta scores: E(): 7.6e-36, 44.16% id in 351 aa, and to Xanthomonas campestris, and Xanthomonas campestris regulatory protein xcc1845 SWALL:AAM41134 (EMBL:AJ245997) (306 aa) fasta scores: E(): 7.8e-12, 32.01% id in 328 aa; hypothetical protein 2744691..2745767 Burkholderia pseudomallei K96243 3092074 YP_108875.1 CDS BPSL2279 NC_006350.1 2745783 2747477 D Similar to Escherichia coli single-stranded-DNA-specific exonuclease RecJ SWALL:RECJ_ECOLI (SWALL:P21893) (577 aa) fasta scores: E(): 1.4e-93, 49.18% id in 555 aa, and to Ralstonia solanacearum probable single-stranded-DNA-specific exonuclease rsc1115 or rs05755 SWALL:Q8Y0C9 (EMBL:AL646062) (565 aa) fasta scores: E(): 4.1e-152, 69.13% id in 567 aa; single-stranded-DNA-specific exonuclease 2745783..2747477 Burkholderia pseudomallei K96243 3092075 YP_108876.1 CDS prfB NC_006350.1 2747838 2748942 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 join(2747838..2747918,2747920..2748942) Burkholderia pseudomallei K96243 3093204 YP_108877.1 CDS lysS NC_006350.1 2749035 2750561 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2749035..2750561 Burkholderia pseudomallei K96243 3092883 YP_108878.1 CDS BPSL2282 NC_006350.1 2750912 2751637 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1027 or rs04225 SWALL:Q8Y0L6 (EMBL:AL646062) (250 aa) fasta scores: E(): 5.2e-23, 48.29% id in 234 aa, and to Ralstonia solanacearum glycin-rich transmembrane protein rsp0506 or rs00385 SWALL:Q8XSH0 (EMBL:AL646079) (222 aa) fasta scores: E(): 1.1e-06, 29.69% id in 229 aa. Possible alternative translational start site; hypothetical protein 2750912..2751637 Burkholderia pseudomallei K96243 3092259 YP_108879.1 CDS BPSL2283 NC_006350.1 2752073 2752282 R Similar to Vibrio cholerae hypothetical protein vc0754 SWALL:Q9KTX6 (EMBL:AE004160) (64 aa) fasta scores: E(): 3.2e-15, 64.51% id in 62 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein b2524 or z3791 or ecs3390 SWALL:YFHJ_ECOLI (SWALL:P37096) (66 aa) fasta scores: E(): 2.3e-14, 62.5% id in 64 aa; hypothetical protein complement(2752073..2752282) Burkholderia pseudomallei K96243 3092260 YP_108880.1 CDS fdx NC_006350.1 2752301 2752642 R Similar to Escherichia coli, and Escherichia coli O157:H7 ferredoxin, 2Fe-2S Fdx SWALL:FER_ECOLI (SWALL:P25528) (110 aa) fasta scores: E(): 5.2e-30, 68.46% id in 111 aa, and to Ralstonia solanacearum probable ferredoxin rsc1025 or rs04229 SWALL:Q8Y0L8 (EMBL:AL646062) (112 aa) fasta scores: E(): 9.5e-33, 75.22% id in 113 aa; (2Fe-2S) ferredoxin complement(2752301..2752642) Burkholderia pseudomallei K96243 3094860 YP_108881.1 CDS hscA NC_006350.1 2752735 2754603 R involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA complement(2752735..2754603) Burkholderia pseudomallei K96243 3092392 YP_108882.1 CDS hscB NC_006350.1 2754661 2755188 R J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB complement(2754661..2755188) Burkholderia pseudomallei K96243 3094409 YP_108883.1 CDS BPSL2287 NC_006350.1 2755301 2755624 R Similar to Ralstonia solanacearum hypothetical protein rsc1021 rsc1021 or rs04236 SWALL:Q8Y0M2 (EMBL:AL646062) (106 aa) fasta scores: E(): 4e-34, 84.76% id in 105 aa, and to Pasteurella multocida hypothetical protein Pm0320 pm0320 SWALL:Q9CNV4 (EMBL:AE006068) (107 aa) fasta scores: E(): 1.4e-31, 75.7% id in 107 aa; HesB family protein complement(2755301..2755624) Burkholderia pseudomallei K96243 3094410 YP_108884.1 CDS BPSL2288 NC_006350.1 2755707 2756114 R Similar to Ralstonia solanacearum probable NifU protein rsc1020 or rs04249 SWALL:Q8Y0M3 (EMBL:AL646062) (133 aa) fasta scores: E(): 1.5e-43, 88.06% id in 134 aa, and to Neisseria meningitidis NifU protein nmb1380 SWALL:Q9JYX9 (EMBL:AE002486) (128 aa) fasta scores: E(): 3.6e-41, 82.54% id in 126 aa; scaffold protein complement(2755707..2756114) Burkholderia pseudomallei K96243 3092118 YP_108885.1 CDS iscS NC_006350.1 2756180 2757403 R catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase complement(2756180..2757403) Burkholderia pseudomallei K96243 3094249 YP_108886.1 CDS BPSL2290 NC_006350.1 2757472 2758011 R Similar to Ralstonia solanacearum hypothetical protein rsc1018 or rs04257 SWALL:Q8Y0M5 (EMBL:AL646062) (193 aa) fasta scores: E(): 2.4e-48, 73.86% id in 199 aa, and to Pseudomonas aeruginosa hypothetical protein pa3815 SWALL:Q9HXI7 (EMBL:AE004799) (163 aa) fasta scores: E(): 2.2e-27, 55.26% id in 152 aa; hypothetical protein complement(2757472..2758011) Burkholderia pseudomallei K96243 3092119 YP_108887.1 CDS BPSL2291 NC_006350.1 2758113 2758592 R Similar to Schizosaccharomyces pombe low molecular weight phosphotyrosine protein phosphatase STP1 or SPAC1071.12c or SPAC926.01c SWALL:PPAL_SCHPO (SWALL:P41893) (156 aa) fasta scores: E(): 3.1e-19, 44.85% id in 136 aa, and to Pseudomonas aeruginosa phosphotyrosine protein phosphatase pa2978 SWALL:Q9HZM6 (EMBL:AE004723) (154 aa) fasta scores: E(): 1.1e-26, 58.1% id in 148 aa; low molecular weight phosphotyrosine protein phosphatase complement(2758113..2758592) Burkholderia pseudomallei K96243 3091669 YP_108888.1 CDS BPSL2292 NC_006350.1 2758684 2758944 R Weakly similar to the N-terminal region of Pseudomonas glumae lipase chaperone LipB SWALL:LICH_PSEGL (SWALL:Q05490) (353 aa) fasta scores: E(): 10, 40.78% id in 76 aa; hypothetical protein complement(2758684..2758944) Burkholderia pseudomallei K96243 3091670 YP_108889.1 CDS BPSL2293 NC_006350.1 2759055 2760506 R Similar to Ralstonia solanacearum iron-sulfur binding protein rsc1612 or rs03975 SWALL:Q8XYZ4 (EMBL:AL646065) (469 aa) fasta scores: E(): 7.4e-134, 75.31% id in 474 aa, and to Bacillus halodurans hypothetical protein bh1833 SWALL:Q9KBU1 (EMBL:AP001513) (485 aa) fasta scores: E(): 1.1e-65, 39.95% id in 488 aa; iron-sulfur binding protein complement(2759055..2760506) Burkholderia pseudomallei K96243 3093480 YP_108890.1 CDS BPSL2294 NC_006350.1 2760648 2761370 R Similar to Escherichia coli hypothetical protein ykge ykge or b0306 SWALL:YKGE_ECOLI (SWALL:P77252) (239 aa) fasta scores: E(): 1.9e-28, 37.39% id in 238 aa, and to Ralstonia solanacearum hypothetical protein rsc1611 rsc1611 or rs03974 SWALL:Q8XYZ5 (EMBL:AL646065) (241 aa) fasta scores: E(): 2.7e-76, 78.75% id in 240 aa; hypothetical protein complement(2760648..2761370) Burkholderia pseudomallei K96243 3093481 YP_108891.1 CDS BPSL2295 NC_006350.1 2761553 2762365 D Similar to Ralstonia solanacearum probable transcription regulator protein rsc1610 or rs03973 SWALL:Q8XYZ6 (EMBL:AL646065) (266 aa) fasta scores: E(): 1.3e-78, 84.73% id in 249 aa, and to the C-terminal region of Erwinia chrysanthemi pectin degradation repressor protein KdgR SWALL:KDGR_ERWCH (SWALL:P37728) (305 aa) fasta scores: E(): 3.6e-19, 32.68% id in 257 aa; IclR family transcriptional regulator 2761553..2762365 Burkholderia pseudomallei K96243 3092232 YP_108892.1 CDS BPSL2296 NC_006350.1 2762495 2763958 R Similar to Thermoanaerobacter tengcongensis transposase TTE0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 7e-74, 43.32% id in 457 aa, and to Pseudomonas sp. transposase TnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 2.5e-32, 31.23% id in 477 aa; transposase complement(2762495..2763958) Burkholderia pseudomallei K96243 3092233 YP_108893.1 CDS BPSL2297 NC_006350.1 2764077 2765156 R Similar to the C-terminus of Escherichia coli penicillin-binding protein 7 precursor PbpG SWALL:PBP7_ECOLI (SWALL:P33364) (313 aa) fasta scores: E(): 6.5e-40, 47.84% id in 278 aa, and to the full length Ralstonia solanacearum D-alanyl-D-alanine-endopeptidase rsc1609 or rs03972 SWALL:Q8XYZ7 (EMBL:AL646065) (375 aa) fasta scores: E(): 5.4e-63, 55.52% id in 353 aa; peptidase complement(2764077..2765156) Burkholderia pseudomallei K96243 3091882 YP_108894.1 CDS phaP NC_006350.1 2765868 2766437 D Similar to Alcaligenes eutrophus granule-associated protein (phasin) PhaP SWALL:Q44013 (EMBL:X85729) (192 aa) fasta scores: E(): 1.7e-37, 71.82% id in 181 aa, and to Ralstonia solanacearum hypothetical protein rsc1605 or rs03967 SWALL:Q8XZ01 (EMBL:AL646065) (193 aa) fasta scores: E(): 2.9e-35, 68.5% id in 181 aa; phasin-like protein 2765868..2766437 Burkholderia pseudomallei K96243 3093221 YP_108895.1 CDS BPSL2299 NC_006350.1 2766719 2768488 R C-terminal region is similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 dihydrolipoamide dehydrogenase LpdA or Lpd SWALL:DLDH_ECOLI (SWALL:P00391) (473 aa) fasta scores: E(): 1.9e-93, 65.75% id in 473 aa. Full length CDS is similar to Ralstonia solanacearum probable dihydrolipoamide dehydrogenase rsc1603 or rs03965 SWALL:Q8XZ03 (EMBL:AL646065) (594 aa) fasta scores: E(): 2.1e-142, 76.88% id in 597 aa; dihydrolipoamide dehydrogenase complement(2766719..2768488) Burkholderia pseudomallei K96243 3091883 YP_108896.1 CDS pdhB NC_006350.1 2768796 2770436 R Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; dihydrolipoamide acetyltransferase complement(2768796..2770436) Burkholderia pseudomallei K96243 3092156 YP_108897.1 CDS aceE NC_006350.1 2770569 2773265 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(2770569..2773265) Burkholderia pseudomallei K96243 3093625 YP_108898.1 CDS BPSL2302 NC_006350.1 2773508 2776048 D Weakly similar to Rhodobacter capsulatus C4-dicarboxylate transport sensor protein DctS SWALL:DCTS_RHOCA (SWALL:P37739) (657 aa) fasta scores: E(): 3.1e-26, 30.07% id in 788 aa. Similar to Ralstonia solanacearum probable two-component transmembrane sensor histidine kinase transcription regulator protein rsc1598 or rs03960 SWALL:Q8XZ08 (EMBL:AL646065) (857 aa) fasta scores: E(): 1e-180, 57.72% id in 790 aa; sensor kinase 2773508..2776048 Burkholderia pseudomallei K96243 3093892 YP_108899.1 CDS BPSL2303 NC_006350.1 2776045 2776683 D Similar to Rhizobium meliloti transcriptional regulatory protein FixJ SWALL:FIXJ_RHIME (SWALL:P10958) (204 aa) fasta scores: E(): 1.7e-23, 45.45% id in 198 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc1597 or rs03959 SWALL:Q8XZ09 (EMBL:AL646065) (210 aa) fasta scores: E(): 4.6e-49, 75.12% id in 205 aa; response regulator protein 2776045..2776683 Burkholderia pseudomallei K96243 3093893 YP_108900.1 CDS folD NC_006350.1 2777000 2777857 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2777000..2777857 Burkholderia pseudomallei K96243 3094333 YP_108901.1 CDS BPSL2305 NC_006350.1 2778566 2780665 D Similar to Escherichia coli oligopeptidase A PrlC or OpdA SWALL:OPDA_ECOLI (SWALL:P27298) (680 aa) fasta scores: E(): 9.6e-133, 49.48% id in 685 aa, and to Ralstonia solanacearum probable oligopeptidase rsc1595 or rs03957 SWALL:Q8XZ11 (EMBL:AL646065) (706 aa) fasta scores: E(): 1.1e-203, 73.12% id in 692 aa. Simlar to BPSS1175, 50.366% identity (50.812% ungapped) in 683 aa overlap; oligopeptidase A 2778566..2780665 Burkholderia pseudomallei K96243 3093501 YP_108902.2 CDS BPSL2306 NC_006350.1 2780897 2782129 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2780897..2782129) Burkholderia pseudomallei K96243 3093502 YP_108903.1 CDS BPSL2307 NC_006350.1 2782966 2784246 D Similar to Bacillus subtilis nitrite extrusion protein NarK SWALL:NARK_BACSU (SWALL:P46907) (395 aa) fasta scores: E(): 2.2e-27, 29.13% id in 405 aa, and to Pseudomonas aeruginosa nitrate extrusion protein pa3877 SWALL:O54041 (EMBL:Y15252) (431 aa) fasta scores: E(): 8.7e-87, 52.28% id in 415 aa. Similar to BPSS1154, 56.404% identity (56.824% ungapped) in 406 aa overlap; nitrite extrusion protein 2782966..2784246 Burkholderia pseudomallei K96243 3092694 YP_108904.1 CDS narK NC_006350.1 2784290 2785675 D Similar to Escherichia coli nitrite extrusion protein 1 NarK SWALL:NARK_ECOLI (SWALL:P10903) (463 aa) fasta scores: E(): 4.3e-94, 54.6% id in 456 aa, and to Ralstonia solanacearum probable nitrite/nitrate transporter transmembrane protein rsp0973 or rs02305 SWALL:Q8XR86 (EMBL:AL646082) (461 aa) fasta scores: E(): 8.2e-147, 79.17% id in 461 aa; nitrite extrusion protein 2784290..2785675 Burkholderia pseudomallei K96243 3091539 YP_108905.1 CDS narG NC_006350.1 2785926 2789651 D Similar to Escherichia coli respiratory nitrate reductase 1 alpha chain NarG or NarC or BisD SWALL:NARG_ECOLI (SWALL:P09152) (1246 aa) fasta scores: E(): 0, 66.9% id in 1254 aa, and to Ralstonia solanacearum probable respiratory nitrate reductase alpha chain oxidoreductase rsp0974 or rs02306 SWALL:Q8XR85 (EMBL:AL646082) (1245 aa) fasta scores: E(): 0, 87.14% id in 1245 aa. Similar to BPSS1159, 66.534% identity (68.271% ungapped) in 1258 aa overlap; respiratory nitrate reductase subunit alpha 2785926..2789651 Burkholderia pseudomallei K96243 3094439 YP_108906.1 CDS narH NC_006350.1 2789648 2791201 D Similar to Escherichia coli respiratory nitrate reductase 1 beta chain NarH SWALL:NARH_ECOLI (SWALL:P11349) (512 aa) fasta scores: E(): 3.5e-147, 68.72% id in 502 aa, and to Ralstonia solanacearum probable respiratory nitrate reductase oxidoreductase rsp0975 or rs02307 SWALL:Q8XR84 (EMBL:AL646082) (515 aa) fasta scores: E(): 1.3e-182, 85.49% id in 517 aa. Similar to BPSS1158, 73.415% identity (73.415% ungapped) in 489 aa overlap; respiratory nitrate reductase subunit beta 2789648..2791201 Burkholderia pseudomallei K96243 3091538 YP_108907.1 CDS BPSL2311 NC_006350.1 2791225 2791902 D Similar to Escherichia coli, and Escherichia coli O157:H7 respiratory nitrate reductase 1 delta chain NarJ SWALL:NARJ_ECOLI (SWALL:P11351) (236 aa) fasta scores: E(): 3.6e-14, 37.28% id in 228 aa, and to Ralstonia solanacearum respiratory nitrate reductase oxidoreductase narj or rsp0976 or rs02308 SWALL:Q8XR83 (EMBL:AL646082) (226 aa) fasta scores: E(): 7.3e-47, 64.57% id in 223 aa; respiratory nitrate reductase delta chain 2791225..2791902 Burkholderia pseudomallei K96243 3092695 YP_108908.1 CDS BPSL2312 NC_006350.1 2791939 2792625 D Similar to Escherichia coli, and Escherichia coli O157:H7 respiratory nitrate reductase 2 gamma chain NarV SWALL:NARV_ECOLI (SWALL:P19316) (226 aa) fasta scores: E(): 4.3e-38, 47.82% id in 230 aa, and to Escherichia coli respiratory nitrate reductase 1 gamma chain NarI or ChlI SWALL:NARI_ECOLI (SWALL:P11350) (225 aa) fasta scores: E(): 1.4e-37, 45.81% id in 227 aa, and to Ralstonia solanacearum probable respiratory nitrate reductase transmembrane protein rsp0977 or rs02309 SWALL:Q8XR82 (EMBL:AL646082) (227 aa) fasta scores: E(): 1.9e-69, 75.77% id in 227 aa. Similar to BPSS1156, 53.097% identity (53.333% ungapped) in 226 aa overlap; respiratory nitrate reductase gamma chain 2791939..2792625 Burkholderia pseudomallei K96243 3093307 YP_108909.1 CDS BPSL2313 NC_006350.1 2792767 2794701 D Similar to Escherichia coli, and Escherichia coli O157:H7 nitrate/nitrite sensor protein NarX or NarR SWALL:NARX_ECOLI (SWALL:P10956) (598 aa) fasta scores: E(): 3.7e-15, 28.96% id in 618 aa, and to Ralstonia solanacearum transmembrane nitrate/nitrite sensor kinase transcription regulator protein rsp0979 or rs02311 SWALL:Q8XR80 (EMBL:AL646082) (637 aa) fasta scores: E(): 3.3e-135, 58.93% id in 638 aa; nitrate/nitrite sensor protein 2792767..2794701 Burkholderia pseudomallei K96243 3093308 YP_108910.1 CDS BPSL2314 NC_006350.1 2794725 2795426 D Similar to Bacillus subtilis transcriptional regulatory protein DegU or Iep SWALL:DEGU_BACSU (SWALL:P13800) (229 aa) fasta scores: E(): 4.4e-22, 35.87% id in 223 aa, and to Ralstonia solanacearum probable nitrate/nitrite response regulator transcription regulator protein rsp0980 or rs02312 SWALL:Q8XR79 (EMBL:AL646082) (222 aa) fasta scores: E(): 8.1e-55, 76.21% id in 227 aa; response regulator protein 2794725..2795426 Burkholderia pseudomallei K96243 3093998 YP_108911.1 CDS BPSL2315 NC_006350.1 2795573 2796349 D Similar to Ralstonia solanacearum probable exodeoxyribonuclease III protein rsc1593 or rs03955 SWALL:Q8XZ13 (EMBL:AL646065) (269 aa) fasta scores: E(): 1.7e-67, 67.79% id in 267 aa, and to Xanthomonas axonopodis exodeoxyribonuclease III xac4171 SWALL:AAM39006 (EMBL:AE012067) (259 aa) fasta scores: E(): 2e-54, 55.03% id in 258 aa; hypothetical protein 2795573..2796349 Burkholderia pseudomallei K96243 3093999 YP_108912.1 CDS glnG NC_006350.1 2796638 2798173 R Similar to Escherichia coli, and Escherichia coli O157:H7 nitrogen regulation protein NR(I) GlnG or NtrC or GlnT SWALL:NTRC_ECOLI (SWALL:P06713) (469 aa) fasta scores: E(): 7.5e-84, 55.51% id in 508 aa, and to Ralstonia solanacearum probable nitrogen assimilation regulatory response regulator transcription regulator protein rsc1261 or rs02778 SWALL:Q8XZY4 (EMBL:AL646063) (502 aa) fasta scores: E(): 1.3e-126, 74.75% id in 511 aa; nitrogen regulation protein NR(I) complement(2796638..2798173) Burkholderia pseudomallei K96243 3091636 YP_108913.1 CDS glnL NC_006350.1 2798211 2799305 R Similar to Escherichia coli, and Escherichia coli O157:H7 nitrogen regulation protein NR(II) GlnL or NtrB or GlnR SWALL:NTRB_ECOLI (SWALL:P06712) (349 aa) fasta scores: E(): 1e-35, 42.45% id in 351 aa, and to Ralstonia solanacearum probable nitrogen regulation rsc1260 or rs02784 SWALL:Q8XZY5 (EMBL:AL646063) (361 aa) fasta scores: E(): 8.6e-86, 68.96% id in 348 aa; nitrogen regulation protein NR(II) complement(2798211..2799305) Burkholderia pseudomallei K96243 3091626 YP_108914.1 CDS glnA NC_006350.1 2799520 2800935 R Similar to Escherichia coli glutamine synthetase GlnA SWALL:GLNA_ECOLI (SWALL:P06711) (468 aa) fasta scores: E(): 3.4e-133, 65.51% id in 464 aa, and to Ralstonia solanacearum probable glutamine synthetase rsc1258 or rs02774 SWALL:Q8XZY7 (EMBL:AL646063) (471 aa) fasta scores: E(): 2e-175, 85.77% id in 471 aa; glutamine synthetase complement(2799520..2800935) Burkholderia pseudomallei K96243 3093121 YP_108915.1 CDS BPSL2319 NC_006350.1 2801316 2801804 D Similar to Ralstonia solanacearum hypothetical protein rsc1257 or rs02773 SWALL:Q8XZY8 (EMBL:AL646063) (158 aa) fasta scores: E(): 1.2e-37, 65.78% id in 152 aa. C-terminal region is similar to Mycobacterium tuberculosis hypothetical protein rv0390 or MTCY04D9.02 SWALL:P95198 (EMBL:Z84725) (140 aa) fasta scores: E(): 2.9e-16, 45.32% id in 139 aa; hypothetical protein 2801316..2801804 Burkholderia pseudomallei K96243 3091745 YP_108916.1 CDS BPSL2320 NC_006350.1 2802057 2802875 R Similar to Ralstonia solanacearum hypothetical protein rsc1256 or rs02772 SWALL:Q8XZY9 (EMBL:AL646063) (272 aa) fasta scores: E(): 6.5e-74, 72.18% id in 266 aa, and to Neisseria meningitidis CinA-related protein nmb2128 SWALL:Q9JXC2 (EMBL:AE002560) (266 aa) fasta scores: E(): 1.1e-42, 49.8% id in 257 aa; hypothetical protein complement(2802057..2802875) Burkholderia pseudomallei K96243 3091746 YP_108917.1 CDS BPSL2321 NC_006350.1 2802872 2803705 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1255 or rs02771 SWALL:Q8XZZ0 (EMBL:AL646063) (285 aa) fasta scores: E(): 2.8e-55, 53.58% id in 265 aa; hypothetical protein complement(2802872..2803705) Burkholderia pseudomallei K96243 3094311 YP_108918.1 CDS BPSL2322 NC_006350.1 2804238 2805227 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1254 or rs02770 SWALL:Q8XZZ1 (EMBL:AL646063) (324 aa) fasta scores: E(): 7.8e-63, 49.37% id in 318 aa. Weakly similar to Agrobacterium tumefaciens hypothetical protein atu0318 or AGR_C_556 SWALL:Q8UIH7 (EMBL:AE009003) (313 aa) fasta scores: E(): 2.3e-12, 28.57% id in 308 aa; hypothetical protein complement(2804238..2805227) Burkholderia pseudomallei K96243 3094312 YP_108919.1 CDS BPSL2323 NC_006350.1 2805244 2806236 R Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc1252 or rs02768 SWALL:Q8XZZ3 (EMBL:AL646063) (330 aa) fasta scores: E(): 1.1e-78, 63.57% id in 313 aa; hypothetical protein complement(2805244..2806236) Burkholderia pseudomallei K96243 3092797 YP_108920.1 CDS BPSL2324 NC_006350.1 2806338 2810231 R Similar to C-terminal regions of Escherichia coli ATP-dependent helicase HrpA SWALL:HRPA_ECOLI (SWALL:P43329) (1300 aa) fasta scores: E(): 1.8e-126, 46.08% id in 1315 aa, and to Salmonella typhimurium helicase, ATP-dependent HrpA or stm1641 SWALL:Q8ZP95 (EMBL:AE008772) (1300 aa) fasta scores: E(): 7.2e-128, 46.3% id in 1313 aa. Poor translational start site, possible gene remnant; ATP-dependent helicase complement(2806338..2810231) Burkholderia pseudomallei K96243 3092798 YP_108921.1 CDS BPSL2325 NC_006350.1 2810489 2811865 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2810489..2811865 Burkholderia pseudomallei K96243 3092976 YP_108922.1 CDS BPSL2326 NC_006350.1 2811918 2812193 D Similar to Ralstonia solanacearum hypothetical protein rsc1235 or rs02742 SWALL:Q8Y010 (EMBL:AL646063) (91 aa) fasta scores: E(): 1.1e-29, 85.22% id in 88 aa, and to Neisseria meningitidis hypothetical protein nma0419 or nmb2021 SWALL:Q9JQP5 (EMBL:AL162753) (88 aa) fasta scores: E(): 1.8e-23, 67.81% id in 87 aa; hypothetical protein 2811918..2812193 Burkholderia pseudomallei K96243 3092977 YP_108923.1 CDS BPSL2327 NC_006350.1 2812366 2813709 R Similar to Escherichia coli shikimate transporter ShiA SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 9e-48, 35.09% id in 416 aa, and to the N-terminal region of Pseudomonas aeruginosa probable MFS transporter pa3595 SWALL:Q9HY31 (EMBL:AE004780) (469 aa) fasta scores: E(): 1.1e-60, 44.6% id in 426 aa. Similar to BPSS1252, 65.176% identity (65.485% ungapped) in 425 aa overlap, and to BPSL1075, 66.914% identity (67.079% ungapped) in 405 aa overlap, and to BPSS2123, 61.893% identity (61.893% ungapped) in 412 aa overlap; transporter protein complement(2812366..2813709) Burkholderia pseudomallei K96243 3092136 YP_108924.1 CDS BPSL2328 NC_006350.1 2813906 2815288 R Possible pseudogene. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa3592 SWALL:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 6.1e-98, 69.63% id in 359 aa, and Rhizobium meliloti conserved membrane-anchored protein rb0848 or smb21182 SWALL:Q92V66 (EMBL:AL603645) (394 aa) fasta scores: E(): 1.7e-51, 42.06% id in 359 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible out of frame translational start after codon 56; CAIB/BAIF family protein complement(2813906..2815288) Burkholderia pseudomallei K96243 3092137 YP_108925.1 CDS BPSL2329 NC_006350.1 2815456 2817249 R Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa3593 SWALL:Q9HY33 (EMBL:AE004779) (575 aa) fasta scores: E(): 1.6e-146, 68.47% id in 571 aa, and to Escherichia coli aidb protein AidB SWALL:AIDB_ECOLI (SWALL:P33224) (541 aa) fasta scores: E(): 2.5e-31, 32.7% id in 526 aa. CDS is extended at the C-terminus in comparison to the E. coli protein and other orthologues. Possible alternative translational start sites; acyl-CoA dehydrogenase complement(2815456..2817249) Burkholderia pseudomallei K96243 3094830 YP_108926.1 CDS BPSL2330 NC_006350.1 2817358 2818260 D Similar to Escherichia coli xanthosine operon regulatory protein XapR or PndR SWALL:XAPR_ECOLI (SWALL:P23841) (294 aa) fasta scores: E(): 1.4e-28, 39.08% id in 261 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3594 SWALL:Q9HY32 (EMBL:AE004780) (295 aa) fasta scores: E(): 5.7e-68, 61.97% id in 284 aa; LysR family transcriptional regulator 2817358..2818260 Burkholderia pseudomallei K96243 3094831 YP_108927.1 CDS BPSL2331 NC_006350.1 2818679 2818966 R hypothetical protein complement(2818679..2818966) Burkholderia pseudomallei K96243 3091874 YP_108928.1 CDS BPSL2332 NC_006350.1 2819230 2820102 R Poor database matches. C-terminus is weakly similar to N-terminal region is of Neisseria meningitidis hypothetical protein Nma0724 nma0724 SWALL:Q9JVR9 (EMBL:AL162754) (1161 aa) fasta scores: E(): 2.4, 23.69% id in 249 aa; hypothetical protein complement(2819230..2820102) Burkholderia pseudomallei K96243 3091875 YP_108929.1 CDS BPSL2333 NC_006350.1 2820136 2820387 R Similar to Escherichia coli O157:H7 hypothetical protein ecs1067 SWALL:Q8X2Z4 (EMBL:AP002554) (95 aa) fasta scores: E(): 7.4e-08, 40.96% id in 83 aa, and to Escherichia coli O157:H7 hypothetical protein ecs2281 SWALL:Q8X366 (EMBL:AP002557) (92 aa) fasta scores: E(): 1.4e-07, 43.37% id in 83 aa; hypothetical protein complement(2820136..2820387) Burkholderia pseudomallei K96243 3092281 YP_108930.1 CDS BPSL2334 NC_006350.1 2820398 2820856 R Similar to Xylella fastidiosa hypothetical protein xf2068 SWALL:Q9PBS2 (EMBL:AE004023) (151 aa) fasta scores: E(): 1.5e-18, 42.1% id in 152 aa; hypothetical protein complement(2820398..2820856) Burkholderia pseudomallei K96243 3092282 YP_108931.1 CDS BPSL2335 NC_006350.1 2821100 2822527 R Similar to Pseudomonas aeruginosa probable aminotransferase pa0299 SWALL:Q9I6J2 (EMBL:AE004467) (456 aa) fasta scores: E(): 3.5e-110, 57.78% id in 443 aa, and to Pseudomonas fluorescens component of putrescine transport system BioA SWALL:Q9AH00 (EMBL:AF323694) (453 aa) fasta scores: E(): 1.3e-109, 58.07% id in 446 aa. CDS is extended at the N-terminus in comparison to orthologues. Similar to BPSS0468, 96.218% identity (97.240% ungapped) in 476 aa overlap; aminotransferase complement(2821100..2822527) Burkholderia pseudomallei K96243 3094763 YP_108932.1 CDS BPSL2336 NC_006350.1 2822562 2823896 R Similar to Pseudomonas aeruginosa probable glutamine synthetase pa0298 SWALL:Q9I6J3 (EMBL:AE004467) (452 aa) fasta scores: E(): 1.2e-104, 55.35% id in 448 aa, and to Caulobacter crescentus glutamine synthetase cc3130 SWALL:Q9A3S2 (EMBL:AE005976) (465 aa) fasta scores: E(): 2.5e-109, 61.53% id in 442 aa. BPSS0469, 87.838% identity (87.838% ungapped) in 444 aa overlap; glutamine synthetase complement(2822562..2823896) Burkholderia pseudomallei K96243 3094764 YP_108933.1 CDS BPSL2337 NC_006350.1 2823929 2824720 R Similar to Pseudomonas aeruginosa probable glutamine amidotransferase pa0297 SWALL:Q9I6J4 (EMBL:AE004467) (250 aa) fasta scores: E(): 7.4e-50, 58.26% id in 242 aa, and to Xanthomonas campestris glutamine amidotransferase xcc2347 SWALL:AAM41625 (EMBL:AE012342) (251 aa) fasta scores: E(): 5.8e-43, 56.01% id in 241 aa. Similar to BPSS0470, 66.537% identity (67.857% ungapped) in 257 aa overlap; glutamine amidotransferase class-I complement(2823929..2824720) Burkholderia pseudomallei K96243 3092884 YP_108934.1 CDS BPSL2338 NC_006350.1 2825728 2826531 R Similar to Pseudomonas aeruginosa N-formylglutamate amidohydrolase HutG or pa5091 SWALL:Q9HU92 (EMBL:AE004922) (266 aa) fasta scores: E(): 1.1e-50, 54.37% id in 263 aa, and to Pseudomonas putida N-formylglutamate amidohydrolase HutG SWALL:O31201 (EMBL:AF032970) (267 aa) fasta scores: E(): 2.3e-50, 51.56% id in 256 aa; HutG protein complement(2825728..2826531) Burkholderia pseudomallei K96243 3092885 YP_108935.1 CDS BPSL2339 NC_006350.1 2826775 2828157 R catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase complement(2826775..2828157) Burkholderia pseudomallei K96243 3092652 YP_108936.1 CDS BPSL2340 NC_006350.1 2828171 2829394 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(2828171..2829394) Burkholderia pseudomallei K96243 3092653 YP_108937.1 CDS BPSL2341 NC_006350.1 2829391 2830050 R Similar to Ralstonia solanacearum hypothetical protein rsc2522 or rs01060 SWALL:Q8XWF2 (EMBL:AL646070) (200 aa) fasta scores: E(): 1.6e-15, 42.48% id in 193 aa, and to Pseudomonas putida hypothetical protein in hutC 3'region SWALL:YHUT_PSEPU (SWALL:P24696) (190 aa) fasta scores: E(): 2.8e-15, 40.55% id in 180 aa; hypothetical protein complement(2829391..2830050) Burkholderia pseudomallei K96243 3094099 YP_108938.1 CDS hutU NC_006350.1 2830050 2831738 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(2830050..2831738) Burkholderia pseudomallei K96243 3091781 YP_108939.1 CDS BPSL2343 NC_006350.1 2831781 2832476 R Similar to Klebsiella aerogenes histidine utilization repressor HutC SWALL:HUTC_KLEAE (SWALL:P12380) (241 aa) fasta scores: E(): 2e-38, 47.36% id in 228 aa, and to Ralstonia solanacearum probable histidine utilization repressor transcription regulator protein rsc2648 or rs04568 SWALL:Q8XW27 (EMBL:AL646071) (237 aa) fasta scores: E(): 2e-53, 59.38% id in 229 aa; histidine utilization repressor complement(2831781..2832476) Burkholderia pseudomallei K96243 3094100 YP_108940.1 CDS hutH NC_006350.1 2832481 2834004 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(2832481..2834004) Burkholderia pseudomallei K96243 3091780 YP_108941.1 CDS BPSL2345 NC_006350.1 2834673 2835464 R Weakly similar to Anabaena sp. 4'-phosphopantetheinyl transferase HetI or all5359 SWALL:HETI_ANASP (SWALL:P37695) (237 aa) fasta scores: E(): 9e-12, 31.57% id in 209 aa, and to the N-terminal region of Streptomyces venezuelae phosphopantetheinyl transferase JadM SWALL:Q9L7M4 (EMBL:AF222693) (262 aa) fasta scores: E(): 1.1e-10, 34.89% id in 235 aa; hypothetical protein complement(2834673..2835464) Burkholderia pseudomallei K96243 3092556 YP_108942.1 CDS BPSL2346 NC_006350.1 2835569 2836579 R Similar to Ralstonia solanacearum hypothetical protein rsp0795 or rs01912 SWALL:Q8XRN6 (EMBL:AL646080) (290 aa) fasta scores: E(): 6.6e-18, 33.79% id in 290 aa, and to Pseudomonas aeruginosa hypothetical protein pa1239 SWALL:Q9I499 (EMBL:AE004553) (294 aa) fasta scores: E(): 2.9e-17, 31.68% id in 303 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein complement(2835569..2836579) Burkholderia pseudomallei K96243 3092557 YP_108943.1 CDS BPSL2347 NC_006350.1 2837796 2838521 R Similar to Escherichia coli regulatory protein SdiA SWALL:SDIA_ECOLI (SWALL:P07026) (240 aa) fasta scores: E(): 7.9e-24, 34.87% id in 238 aa, and to Ralstonia solanacearum probable transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein rsp0778 or rs01929 SWALL:Q8XRQ3 (EMBL:AL646080) (248 aa) fasta scores: E(): 8.1e-46, 51.03% id in 241 aa; LuxR family transcriptional regulator complement(2837796..2838521) Burkholderia pseudomallei K96243 3091912 YP_108944.1 CDS BPSL2349 NC_006350.1 2840120 2841580 R Similar to the N-terminal region of Arabidopsis thaliana cryptochrome 1 apoprotein CRY1 or HY4 SWALL:CRY1_ARATH (SWALL:Q43125) (681 aa) fasta scores: E(): 9.1e-64, 39.91% id in 486 aa, and to the full length Caulobacter crescentus deoxyribodipyrimidine photolyase cc1428 SWALL:Q9A8C6 (EMBL:AE005817) (483 aa) fasta scores: E(): 2.6e-93, 50.72% id in 481 aa; DNA photolyase complement(2840120..2841580) Burkholderia pseudomallei K96243 3093055 YP_108945.1 CDS BPSL2350 NC_006350.1 2842000 2843166 D Similar to Pseudomonas oleovorans plasmid-encoded alkane-1 monooxygenase AlkB SWALL:ALKB_PSEOL (SWALL:P12691) (401 aa) fasta scores: E(): 4.1e-75, 47.75% id in 379 aa, and to Burkholderia cepacia alkane hydroxylase AlkB SWALL:Q9AEN3 (EMBL:AJ293306) (386 aa) fasta scores: E(): 1.2e-132, 81.36% id in 381 aa; alkane monooxygenase 2842000..2843166 Burkholderia pseudomallei K96243 3092483 YP_108946.1 CDS BPSL2351 NC_006350.1 2843904 2846192 D Similar to Ralstonia solanacearum probable nitric oxide reductase rsp1505 or rs03036 SWALL:Q8XPY1 (EMBL:AL646085) (756 aa) fasta scores: E(): 2.4e-213, 70.34% id in 762 aa. C-terminal region is similar to Pseudomonas aeruginosa nitric-oxide reductase subunit b norb or pa0524 SWALL:NORB_PSEAE (SWALL:Q59647) (466 aa) fasta scores: E(): 5.7e-22, 28.75% id in 480 aa; hypothetical protein 2843904..2846192 Burkholderia pseudomallei K96243 3092484 YP_108947.1 CDS BPSL2354 NC_006350.1 2846670 2847803 D N-terminus is similar to the C-terminal region of Xanthomonas campestris hypothetical protein xcc2626 SWALL:AAM41898 (EMBL:AE012374) (295 aa) fasta scores: E(): 0.017, 32.3% id in 226 aa. C-terminus is weakly similar to the C-terminal region of Pyrobaculum aerophilum hypothetical protein pae3602 SWALL:Q8ZSS9 (EMBL:AE009940) (375 aa) fasta scores: E(): 0.0079, 28.39% id in 331 aa; hypothetical protein 2846670..2847803 Burkholderia pseudomallei K96243 3093864 YP_108948.1 CDS BPSL2355 NC_006350.1 2847949 2849172 D Similar to Ralstonia solanacearum probable transmembrane protein rsc3399 or rs01707 SWALL:Q8XTZ6 (EMBL:AL646075) (403 aa) fasta scores: E(): 5.1e-53, 43.76% id in 393 aa, and to Rhizobium meliloti hypothetical protein ra0682 or sma1252 SWALL:Q92Z28 (EMBL:AE007256) (403 aa) fasta scores: E(): 5.1e-34, 35.86% id in 382 aa. Similar to BPSL2368, 52.030% identity (52.564% ungapped) in 394 aa overlap; hypothetical protein 2847949..2849172 Burkholderia pseudomallei K96243 3091952 YP_108949.1 CDS BPSL2356 NC_006350.1 2849770 2851533 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2849770..2851533 Burkholderia pseudomallei K96243 3091953 YP_108950.1 CDS BPSL2357 NC_006350.1 2851536 2851748 D Similar to Ralstonia solanacearum hypothetical protein rsp0964 or rs02295 SWALL:Q8XR95 (EMBL:AL646082) (58 aa) fasta scores: E(): 4.1e-12, 70.45% id in 44 aa. Similar the C-terminal region of Thermoanaerobacter tengcongensis oxygen-sensitive ribonucleoside-triphosphate reductase NrdD or tte1850 SWALL:Q8R8Y4 (EMBL:AE013136) (692 aa) fasta scores: E(): 0.0037, 51.61% id in 31 aa. Possible gene remnant; hypothetical protein 2851536..2851748 Burkholderia pseudomallei K96243 3092096 YP_108951.1 CDS BPSL2358 NC_006350.1 2851767 2852486 D Weakly similar to Clostridium pasteurianum pyruvate formate-lyase activating enzyme Act SWALL:PFLA_CLOPA (SWALL:Q46267) (238 aa) fasta scores: E(): 1e-05, 27.75% id in 209 aa. Similar to Pseudomonas aeruginosa probable radical-activating enzyme pa1919 SWALL:Q9I2I5 (EMBL:AE004618) (232 aa) fasta scores: E(): 3.2e-37, 50.21% id in 231 aa; pyruvate radical-activating enzyme 2851767..2852486 Burkholderia pseudomallei K96243 3092097 YP_108952.1 CDS BPSL2359 NC_006350.1 2852734 2853180 R Similar to Pseudomonas aeruginosa hypothetical protein pa3880 SWALL:Q9HXD2 (EMBL:AE004805) (131 aa) fasta scores: E(): 6.5e-23, 64.76% id in 105 aa, and to Ralstonia solanacearum lipoprotein rsp0967 or rs02298 SWALL:Q8XR92 (EMBL:AL646082) (139 aa) fasta scores: E(): 2.3e-19, 52.99% id in 117 aa. Lower levels of similarity in the C-terminal regions; hypothetical protein complement(2852734..2853180) Burkholderia pseudomallei K96243 3091797 YP_108953.1 CDS BPSL2360 NC_006350.1 2853220 2853699 R Similar to Ralstonia solanacearum hypothetical protein rsp0968 or rs02299 SWALL:Q8XR91 (EMBL:AL646082) (143 aa) fasta scores: E(): 1.5e-11, 41.42% id in 140 aa. C-terminus is similar to the C-terminal region of Yersinia pestis lipid carrier protein ypo3477 SWALL:Q8ZBD9 (EMBL:AJ414157) (173 aa) fasta scores: E(): 1.3e-11, 47.17% id in 106 aa; hypothetical protein complement(2853220..2853699) Burkholderia pseudomallei K96243 3091798 YP_108954.1 CDS BPSL2361 NC_006350.1 2853755 2854642 R Similar to Ralstonia solanacearum hypothetical protein rsp0969 or rs02300 SWALL:Q8XR90 (EMBL:AL646082) (294 aa) fasta scores: E(): 1.6e-53, 49.82% id in 291 aa, and to Yersinia pestis hypothetical protein ypo3480 SWALL:Q8ZBD6 (EMBL:AJ414157) (292 aa) fasta scores: E(): 2e-43, 41.52% id in 301 aa; hypothetical protein complement(2853755..2854642) Burkholderia pseudomallei K96243 3092167 YP_108955.1 CDS BPSL2362 NC_006350.1 2854683 2855717 R Similar to Escherichia coli protease YhbU or b3158 SWALL:YHBU_ECOLI (SWALL:P45527) (331 aa) fasta scores: E(): 8.9e-86, 62.84% id in 331 aa, and to Pseudomonas aeruginosa probable protease pa3913 SWALL:Q9HXA0 (EMBL:AE004808) (331 aa) fasta scores: E(): 1.1e-84, 62.53% id in 331 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site; hypothetical protein complement(2854683..2855717) Burkholderia pseudomallei K96243 3092168 YP_108956.1 CDS BPSL2363 NC_006350.1 2855806 2857023 R Similar to Ralstonia solanacearum hypothetical protein rsc0114 or rs00984 SWALL:Q8Y367 (EMBL:AL646057) (402 aa) fasta scores: E(): 6.8e-91, 64.81% id in 378 aa, and to Neisseria meningitidis hypothetical protein nma1666 SWALL:Q9JTR4 (EMBL:AL162756) (391 aa) fasta scores: E(): 5.7e-81, 57.88% id in 387 aa. CDS is extended at the N-terminus in comparison to orthologues. Similar to BPSL1551, 62.141% identity (62.632% ungapped) in 383 aa overlap; 2-nitropropane dioxygenase complement(2855806..2857023) Burkholderia pseudomallei K96243 3092162 YP_108957.1 CDS BPSL2364 NC_006350.1 2857243 2858559 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0971 or rs02303 SWALL:Q8XR88 (EMBL:AL646082) (406 aa) fasta scores: E(): 3.5e-25, 32.36% id in 411 aa, and to Rhizobium meliloti hypothetical protein ra0687 or sma1259 SWALL:Q92Z23 (EMBL:AE007256) (452 aa) fasta scores: E(): 1.2e-18, 30.42% id in 447 aa; hypothetical protein 2857243..2858559 Burkholderia pseudomallei K96243 3092163 YP_108958.1 CDS BPSL2365 NC_006350.1 2858536 2859228 R Similar to Ralstonia solanacearum probable transcription regulator protein rsp0966 or rs02297 SWALL:Q8XR93 (EMBL:AL646082) (225 aa) fasta scores: E(): 8.1e-27, 38.59% id in 228 aa. Weakly similar to Synechococcus sp. global nitrogen regulator NtcA SWALL:NTCA_SYNP7 (SWALL:P29283) (222 aa) fasta scores: E(): 5.8e-08, 28.91% id in 211 aa; regulatory protein complement(2858536..2859228) Burkholderia pseudomallei K96243 3092078 YP_108959.1 CDS BPSL2366 NC_006350.1 2859237 2860682 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(2859237..2860682) Burkholderia pseudomallei K96243 3092079 YP_108960.1 CDS BPSL2367 NC_006350.1 2860837 2862759 R C-terminal region is similar to the N-terminal region of Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 1.9e-45, 44.1% id in 390 aa, and to an internal region of Ralstonia solanacearum probable methyl-accepting chemotaxis I MCP-I serine chemoreceptor transmembrane protein rsp0507 or rs00386 SWALL:Q8XSG9 (EMBL:AL646079) (600 aa) fasta scores: E(): 5.3e-47, 39.06% id in 535 aa; methyl-accepting chemotaxis protein complement(2860837..2862759) Burkholderia pseudomallei K96243 3091619 YP_108961.1 CDS BPSL2368 NC_006350.1 2863293 2864489 D Similar to Rhodobacter sphaeroides membrane-bound haem-copper protein NnrS SWALL:Q936J2 (EMBL:U62403) (397 aa) fasta scores: E(): 5.1e-40, 38.46% id in 403 aa, and to Ralstonia solanacearum probable transmembrane protein rsc3399 or rs01707 SWALL:Q8XTZ6 (EMBL:AL646075) (403 aa) fasta scores: E(): 5.8e-69, 51.51% id in 396 aa. Similar to BPSL2355, 52.030% identity (52.564% ungapped) in 394 aa overlap; hypothetical protein 2863293..2864489 Burkholderia pseudomallei K96243 3091620 YP_108962.1 CDS BPSL2369 NC_006350.1 2864978 2866432 D with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2864978..2866432 Burkholderia pseudomallei K96243 3091762 YP_108963.1 CDS BPSL2370 NC_006350.1 2866441 2867232 D Similar to Escherichia coli probable ATP-dependent transporter SufC SWALL:SUFC_ECOLI (SWALL:P77499) (248 aa) fasta scores: E(): 1.6e-31, 44.81% id in 241 aa, and to Xanthomonas axonopodis ABC transporter ATP-binding protein xac2936 SWALL:AAM37781 (EMBL:AE011935) (254 aa) fasta scores: E(): 3e-32, 44.81% id in 241 aa; ATP-dependent transporter protein 2866441..2867232 Burkholderia pseudomallei K96243 3091763 YP_108964.1 CDS BPSL2371 NC_006350.1 2867237 2868472 D Weakly similar to Escherichia coli SufD b1681 SWALL:SUFD_ECOLI (SWALL:P77689) (423 aa) fasta scores: E(): 9.9e-06, 21.84% id in 380 aa, and to Xanthomonas axonopodis ABC transporter permease xac2937 SWALL:AAM37782 (EMBL:AE011935) (420 aa) fasta scores: E(): 9.6e-13, 27.13% id in 387 aa; hypothetical protein 2867237..2868472 Burkholderia pseudomallei K96243 3093069 YP_108965.1 CDS BPSL2372 NC_006350.1 2868474 2869706 D Similar to Escherichia coli selenocysteine lyase CsdB or SufS or b1680 SWALL:CSDB_ECOLI (SWALL:P77444) (406 aa) fasta scores: E(): 4.1e-54, 40% id in 410 aa, and to Vibrio cholerae probable cysteine desulfurase vc2309 SWALL:CSD_VIBCH (SWALL:Q9KPQ7) (404 aa) fasta scores: E(): 1.6e-61, 43.27% id in 409 aa; selenocysteine lyase 2868474..2869706 Burkholderia pseudomallei K96243 3093070 YP_108966.1 CDS BPSL2373 NC_006350.1 2869703 2870194 D Similar to Bacillus halodurans nitrogen fixation protein bh3468 SWALL:Q9K7A1 (EMBL:AP001518) (146 aa) fasta scores: E(): 5.2e-18, 40% id in 135 aa, and to Bacillus subtilis NifU-like protein NifU SWALL:NIFU_BACSU (SWALL:O32163) (147 aa) fasta scores: E(): 4.6e-17, 37.98% id in 129 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 2869703..2870194 Burkholderia pseudomallei K96243 3092357 YP_108967.1 CDS BPSL2374 NC_006350.1 2870191 2870739 D Similar to Xanthomonas axonopodis hypothetical protein xac0926 SWALL:AAM35814 (EMBL:AE011724) (184 aa) fasta scores: E(): 8.7e-26, 46.4% id in 181 aa, and to Xanthomonas campestris hypothetical protein xcc0849 SWALL:AAM40164 (EMBL:AE012184) (184 aa) fasta scores: E(): 2.3e-25, 45.85% id in 181 aa; hypothetical protein 2870191..2870739 Burkholderia pseudomallei K96243 3092358 YP_108968.1 CDS BPSL2375 NC_006350.1 2871037 2871336 R Similar to Ralstonia solanacearum hypothetical protein rsp1504 or rs03037 SWALL:Q8XPY2 (EMBL:AL646085) (100 aa) fasta scores: E(): 3.2e-10, 40% id in 100 aa, and to Clostridium acetobutylicum hypothetical protein cac0072 SWALL:Q97MW8 (EMBL:AE007520) (77 aa) fasta scores: E(): 3.2e-12, 52.56% id in 78 aa. CDS is extended at the C-terminus in comparison to C. acetobutylicum protein; hypothetical protein complement(2871037..2871336) Burkholderia pseudomallei K96243 3094281 YP_108969.1 CDS BPSL2376 NC_006350.1 2871527 2872015 D Possible gene remnant. N-terminus is similar to the N-terminal regions of Bacillus subtilis hypothetical protein YhdE SWALL:YHDE_BACSU (SWALL:O07573) (146 aa) fasta scores: E(): 1.9e-22, 50% id in 132 aa, and Neisseria meningitidis hypothetical protein nma2048 SWALL:Q9JT09 (EMBL:AL162758) (147 aa) fasta scores: E(): 6.6e-21, 47.76% id in 134 aa; DNA-binding protein 2871527..2872015 Burkholderia pseudomallei K96243 3094282 YP_108970.1 CDS BPSL2377 NC_006350.1 2872233 2872658 R Similar to Ralstonia solanacearum hemerythrin-like protein rsc0777 or rs05077 SWALL:HEMT_RALSO (SWALL:Q8Y1B3) (137 aa) fasta scores: E(): 7e-15, 43.1% id in 116 aa, and to Aquifex aeolicus hemerythrin-like protein AQ_1719 SWALL:HEMT_AQUAE (SWALL:O67614) (131 aa) fasta scores: E(): 0.0095, 28.33% id in 120 aa; cation-binding hemerythrin HHE family protein complement(2872233..2872658) Burkholderia pseudomallei K96243 3092370 YP_108971.1 CDS cyoA NC_006350.1 2873037 2873927 D Similar to Escherichia coli ubiquinol oxidase polypeptide II precursor CyoA SWALL:CYOA_ECOLI (SWALL:P18400) (315 aa) fasta scores: E(): 2.9e-63, 55.51% id in 290 aa, and to Acetobacter pasteurianus ubiquinol oxidase subunit II SWALL:BAB97173 (EMBL:AB086015) (308 aa) fasta scores: E(): 1.2e-72, 66.07% id in 280 aa. Similar to BPSS1897, 93.220% identity (93.537% ungapped) in 295 aa overlap; ubiquinol oxidase polypeptide II 2873037..2873927 Burkholderia pseudomallei K96243 3092531 YP_108972.1 CDS cyoB NC_006350.1 2873931 2875937 D Similar to Escherichia coli, and Escherichia coli O157:H7 ubiquinol oxidase polypeptide I CyoB SWALL:CYOB_ECOLI (SWALL:P18401) (663 aa) fasta scores: E(): 6.3e-183, 66.2% id in 651 aa, and to Acetobacter pasteurianus ubiquinol oxidase subunit I SWALL:BAB97174 (EMBL:AB086015) (663 aa) fasta scores: E(): 4.4e-195, 69.38% id in 650 aa. Similar to BPSS1896, 84.179% identity (84.431% ungapped) in 670 aa overlap; ubiquinol oxidase polypeptide I 2873931..2875937 Burkholderia pseudomallei K96243 3093212 YP_108973.1 CDS cyoC NC_006350.1 2875937 2876542 D Similar to Escherichia coli cytochrome o ubiquinol oxidase subunit III CyoC SWALL:CYOC_ECOLI (SWALL:P18402) (204 aa) fasta scores: E(): 2.7e-45, 56.65% id in 203 aa, and to Acetobacter pasteurianus ubiquinol oxidase subunit III SWALL:BAB97175 (EMBL:AB086015) (201 aa) fasta scores: E(): 1.3e-50, 62.56% id in 203 aa. Similar to BPSS1895, 87.500% identity (87.958% ungapped) in 192 aa overlap; cytochrome o ubiquinol oxidase subunit III 2875937..2876542 Burkholderia pseudomallei K96243 3094854 YP_108974.1 CDS cyoD NC_006350.1 2876543 2876875 D Similar to Escherichia coli, and Escherichia coli O157:H7 cytochrome o ubiquinol oxidase CyoD SWALL:CYOD_ECOLI (SWALL:P18403) (109 aa) fasta scores: E(): 4.5e-16, 46.29% id in 108 aa, and to Yersinia pestis cytochrome o ubiquinol oxidase subunit ypo3167 SWALL:Q8ZC55 (EMBL:AJ414155) (110 aa) fasta scores: E(): 2.3e-18, 50% id in 108 aa. Similar to BPSS1894, 80.000% identity (80.000% ungapped) in 110 aa overlap; cytochrome o ubiquinol oxidase 2876543..2876875 Burkholderia pseudomallei K96243 3094855 YP_108975.1 CDS BPSL2382 NC_006350.1 2877018 2878250 D Internal region is weakly similar to Synechococcus sp. omega-3 desaturase DesB SWALL:O07872 (EMBL:U36389) (350 aa) fasta scores: E(): 4.4e-18, 26.3% id in 346 aa; fatty acid desaturase 2877018..2878250 Burkholderia pseudomallei K96243 3092371 YP_108976.1 CDS BPSL2383 NC_006350.1 2878543 2879337 R Similar to Salmonella typhimurium histidine-binding periplasmic protein precursor HisJ SWALL:HISJ_SALTY (SWALL:P02910) (260 aa) fasta scores: E(): 1.1e-45, 47.26% id in 256 aa, and to Yersinia pestis histidine-binding periplasmic protein ypo2774 SWALL:Q8ZD19 (EMBL:AJ414153) (262 aa) fasta scores: E(): 1.1e-47, 50.95% id in 261 aa. Similar to BPSL3383, 55.636% identity (56.250% ungapped) in 275 aa overlap, and to BPSS0269, 51.953% identity (51.953% ungapped) in 256 aa overlap, and to BPSL1033, 51.575% identity (51.575% ungapped) in 254 aa overlap; histidine-binding periplasmic protein complement(2878543..2879337) Burkholderia pseudomallei K96243 3091630 YP_108977.1 CDS astE NC_006350.1 2880134 2881183 R catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase complement(2880134..2881183) Burkholderia pseudomallei K96243 3092489 YP_108978.1 CDS astB NC_006350.1 2881167 2882507 R catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase complement(2881167..2882507) Burkholderia pseudomallei K96243 3093485 YP_108979.1 CDS astD NC_006350.1 2882521 2883984 R a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase complement(2882521..2883984) Burkholderia pseudomallei K96243 3093486 YP_108980.1 CDS BPSL2388 NC_006350.1 2883989 2885020 R Similar to Escherichia coli, and Escherichia coli O157:H7 arginine N-succinyltransferase AstA SWALL:ASTA_ECOLI (SWALL:P76218) (344 aa) fasta scores: E(): 7.4e-60, 46.74% id in 338 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, beta chain AruA or pa0897 SWALL:ASTG_PSEAE (SWALL:P80358) (340 aa) fasta scores: E(): 3.9e-53, 42.22% id in 341 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, alpha chain AstA or AruF or pa0896 SWALL:ASTA_PSEAE (SWALL:P80357) (338 aa) fasta scores: E(): 2e-39, 37.13% id in 342 aa; arginine N-succinyltransferase subunit beta complement(2883989..2885020) Burkholderia pseudomallei K96243 3093017 YP_108981.1 CDS BPSL2389 NC_006350.1 2885017 2886075 R Similar to Pseudomonas aeruginosa arginine N-succinyltransferase, alpha chain AstA or AruF or pa0896 SWALL:ASTA_PSEAE (SWALL:P80357) (338 aa) fasta scores: E(): 1e-52, 44.34% id in 336 aa, and to Escherichia coli, and Escherichia coli O157:H7 arginine N-succinyltransferase AstA SWALL:ASTA_ECOLI (SWALL:P76218) (344 aa) fasta scores: E(): 1.1e-36, 35.5% id in 338 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, beta chain AruG or pa0897 SWALL:ASTG_PSEAE (SWALL:P80358) (340 aa) fasta scores: E(): 2e-36, 36.41% id in 346 aa; arginine N-succinyltransferase subunit alpha complement(2885017..2886075) Burkholderia pseudomallei K96243 3093018 YP_108982.1 CDS argD NC_006350.1 2886121 2887353 R DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase complement(2886121..2887353) Burkholderia pseudomallei K96243 3093428 YP_108983.1 CDS BPSL2391 NC_006350.1 2888093 2889139 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5380 SWALL:Q9HTI4 (EMBL:AE004950) (367 aa) fasta scores: E(): 2.6e-41, 40.06% id in 322 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.9e-35, 35.67% id in 328 aa; AraC family transcriptional regulator complement(2888093..2889139) Burkholderia pseudomallei K96243 3094403 YP_108984.1 CDS hisP NC_006350.1 2889158 2889952 R Similar to Salmonella typhimurium histidine transport ATP-binding protein HisP SWALL:HISP_SALTY (SWALL:P02915) (258 aa) fasta scores: E(): 1.5e-61, 70.35% id in 253 aa, and to Pseudomonas aeruginosa arginine/ornithine transport ATP-binding protein AotP or pa0892 SWALL:AOTP_PSEAE (SWALL:O30506) (254 aa) fasta scores: E(): 1.3e-61, 71.93% id in 253 aa. Similar to BPSL1030, 87.747% identity (87.747% ungapped) in 253 aa overlap, and to BPSS0983, 78.656% identity (78.656% ungapped) in 253 aa overlap, and to BPSS2335, 51.417% identity (54.043% ungapped) in 247 aa overlap, and to the C-terminal region of BPSS1671, 52.362% identity (53.629% ungapped) in 254 aa overlap; histidine transport ATP-binding protein complement(2889158..2889952) Burkholderia pseudomallei K96243 3094528 YP_108985.1 CDS hisM NC_006350.1 2889974 2890687 R Similar to Salmonella typhimurium, and Salmonella typhi histidine transport system permease HisM SWALL:HISM_SALTY (SWALL:P02912) (235 aa) fasta scores: E(): 1.2e-59, 61.96% id in 234 aa, and to Yersinia pestis histidine transport system permease ypo2776 SWALL:Q8ZD17 (EMBL:AJ414153) (238 aa) fasta scores: E(): 1.9e-60, 63.36% id in 232 aa. Similar to BPSL1031, 74.138% identity (74.138% ungapped) in 232 aa overlap, and to BPSS0982, 67.511% identity (67.511% ungapped) in 237 aa overlap; histidine transport system permease complement(2889974..2890687) Burkholderia pseudomallei K96243 3094485 YP_108986.1 CDS hisQ NC_006350.1 2890684 2891373 R Similar to Salmonella typhimurium, and Salmonella typhi histidine transport system permease HisQ SWALL:HISQ_SALTY (SWALL:P02913) (228 aa) fasta scores: E(): 7.6e-53, 65.19% id in 227 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2924 SWALL:Q9HZS3 (EMBL:AE004718) (229 aa) fasta scores: E(): 8.1e-55, 68% id in 225 aa. Similar to BPSL1032, 79.039% identity (79.039% ungapped) in 229 aa overlap, and to BPSS0981, 77.293% identity (77.293% ungapped) in 229 aa overlap; histidine transport system permease complement(2890684..2891373) Burkholderia pseudomallei K96243 3094254 YP_108987.1 CDS BPSL2395 NC_006350.1 2891689 2892249 R Similar to Ralstonia solanacearum probable lipoprotein rsc2382 or rs01163 SWALL:Q8XWT8 (EMBL:AL646069) (180 aa) fasta scores: E(): 3.6e-28, 47.97% id in 173 aa. N-terminus is similar to the N-terminal region of Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor acrA or MtcA or Lir SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 0.12, 30.15% id in 126 aa; lipoprotein complement(2891689..2892249) Burkholderia pseudomallei K96243 3094404 YP_108988.1 CDS BPSL2396 NC_006350.1 2892943 2893989 R Weakly similar to Synechococcus sp. hypothetical protein see0027 SWALL:AAM82702 (EMBL:AY120853) (316 aa) fasta scores: E(): 0.0072, 27.15% id in 313 aa, and to Chlorobium tepidum hypothetical protein ct1155 SWALL:AAM72388 (EMBL:AE012876) (354 aa) fasta scores: E(): 0.018, 27.35% id in 329 aa; hypothetical protein complement(2892943..2893989) Burkholderia pseudomallei K96243 3093507 YP_108989.1 CDS BPSL2397 NC_006350.1 2893986 2894873 R Weakly similar to Mus musculus 1810015a11rik protein SWALL:Q9D8Z7 (EMBL:AK007503) (310 aa) fasta scores: E(): 6.5e-09, 30.69% id in 303 aa, and to Listeria innocua hypothetical protein lin2456 SWALL:Q928S6 (EMBL:AL596172) (248 aa) fasta scores: E(): 2.1e-07, 26.29% id in 270 aa; hypothetical protein complement(2893986..2894873) Burkholderia pseudomallei K96243 3093508 YP_108990.1 CDS BPSL2398 NC_006350.1 2894877 2896298 R Similar to Methanopyrus kandleri predicted Fe-S oxidoreductase MK0992 SWALL:Q8TWP0 (EMBL:AE010388) (483 aa) fasta scores: E(): 1.8e-33, 31.3% id in 428 aa. Weakly similar to the N-terminal region of Rhodobacter capsulatus magnesium-protoporphyrin IX monomethyl ester oxidative cyclase subunit BchE SWALL:BCHE_RHOCA (SWALL:P26168) (575 aa) fasta scores: E(): 2.1e-10, 25.69% id in 471 aa; hypothetical protein complement(2894877..2896298) Burkholderia pseudomallei K96243 3092192 YP_108991.1 CDS BPSL2399 NC_006350.1 2896410 2897591 R Similar to Homo sapiens ceramide glucosyltransferase UGCG SWALL:CEGT_HUMAN (SWALL:Q16739) (394 aa) fasta scores: E(): 1.1e-15, 26.7% id in 397 aa, and to Synechocystis sp. ceramide glucosyltransferase slr0813 SWALL:P74046 (EMBL:D90911) (389 aa) fasta scores: E(): 6.3e-25, 28.53% id in 375 aa; glycosyltransferase complement(2896410..2897591) Burkholderia pseudomallei K96243 3092193 YP_108992.1 CDS BPSL2400 NC_006350.1 2898218 2899276 D Similar to Caulobacter crescentus hypothetical protein cc1957 SWALL:Q9A6W9 (EMBL:AE005869) (337 aa) fasta scores: E(): 2e-79, 65.57% id in 337 aa, and to Yersinia pestis hypothetical protein ypo3484 SWALL:Q8ZBD2 (EMBL:AJ414157) (351 aa) fasta scores: E(): 4.6e-74, 63.22% id in 329 aa; luciferase-like monooxygenase 2898218..2899276 Burkholderia pseudomallei K96243 3094285 YP_108993.1 CDS BPSL2401 NC_006350.1 2899747 2900775 R Similar to Pseudomonas aeruginosa probable hydrolytic enzyme pa3053 SWALL:Q9HZF5 (EMBL:AE004730) (335 aa) fasta scores: E(): 2.2e-83, 68.06% id in 310 aa, and to Xanthomonas campestris hydrolase xcc2854 SWALL:AAM42126 (EMBL:AE012398) (331 aa) fasta scores: E(): 2.4e-75, 61.53% id in 312 aa. CDS is extended at the C-terminus in comparison to orthologues; hydrolase complement(2899747..2900775) Burkholderia pseudomallei K96243 3094286 YP_108994.1 CDS pdxY NC_006350.1 2901316 2902179 D Similar to Escherichia coli pyridoxamine kinase PdxY SWALL:PDXY_ECOLI (SWALL:P77150) (287 aa) fasta scores: E(): 4.5e-52, 52.98% id in 285 aa, and to Pseudomonas aeruginosa pyridoxamine kinase pa5516 SWALL:Q9HT57 (EMBL:AE004964) (288 aa) fasta scores: E(): 2.6e-53, 52.85% id in 280 aa; pyridoxamine kinase 2901316..2902179 Burkholderia pseudomallei K96243 3094845 YP_108995.1 CDS plcN NC_006350.1 2902870 2904972 D Highly similar to the previously sequenced Burkholderia pseudomallei non-hemolytic phospholipase C precursor PlcN SWALL:PHLN_BURPS (SWALL:Q9RGS8) (700 aa) fasta scores: E(): 0, 97.13% id in 699 aa. Similar to Ralstonia solanacearum probable non-hemolytic phospholipase C rsc0319 or rs03286 SWALL:Q8Y2L6 (EMBL:AL646058) (700 aa) fasta scores: E(): 4.6e-184, 65.57% id in 700 aa. Similar to BPSL0338, 52.705% identity (56.632% ungapped) in 721 aa overlap; non-hemolytic phospholipase C 2902870..2904972 Burkholderia pseudomallei K96243 3093316 YP_108996.1 CDS BPSL2404 NC_006350.1 2905792 2906940 D Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 6.5e-30, 34.59% id in 370 aa, and to Ralstonia solanacearum amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.6e-58, 48.41% id in 378 aa; periplasmic ligand binding lipoprotein 2905792..2906940 Burkholderia pseudomallei K96243 3094724 YP_108997.1 CDS BPSL2405 NC_006350.1 2907039 2908211 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1590 or rs02147 SWALL:Q8XPP8 (EMBL:AL646085) (398 aa) fasta scores: E(): 8.9e-91, 60.05% id in 388 aa, and to Rhizobium loti hypothetical protein mll4416 SWALL:Q98E45 (EMBL:AP003004) (388 aa) fasta scores: E(): 6.2e-68, 46.03% id in 391 aa; FAD dependent oxidoreductase 2907039..2908211 Burkholderia pseudomallei K96243 3093338 YP_108998.1 CDS BPSL2406 NC_006350.1 2908367 2908828 R Similar to Pseudomonas aeruginosa hypothetical protein pa4828 SWALL:Q9HUY2 (EMBL:AE004896) (151 aa) fasta scores: E(): 6.7e-09, 32.43% id in 148 aa, and to Synechocystis sp. hypothetical protein slr1186 SWALL:P74715 (EMBL:D90917) (148 aa) fasta scores: E(): 8.4e-07, 30.46% id in 151 aa; hypothetical protein complement(2908367..2908828) Burkholderia pseudomallei K96243 3093339 YP_108999.1 CDS BPSL2407 NC_006350.1 2908884 2909855 R No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Pseudomonas chlororaphis protein PhaF SWALL:Q8VV54 (EMBL:AB049413) (275 aa) fasta scores: E(): 0.02, 33.53% id in 167 aa. CDS contains an alanine rich C-terminal region; hypothetical protein complement(2908884..2909855) Burkholderia pseudomallei K96243 3091904 YP_109000.1 CDS BPSL2408 NC_006350.1 2910122 2911186 R Similar to Rhizobium meliloti hypothetical sugar transferase rb0117 or smb20117 SWALL:Q92X45 (EMBL:AL603642) (366 aa) fasta scores: E(): 1.1e-76, 61.76% id in 340 aa, and to Rhizobium meliloti glycosyltransferase rb1021 or smb21581 SWALL:Q92US1 (EMBL:AL603645) (363 aa) fasta scores: E(): 6.6e-72, 58.65% id in 341 aa. Similar to BPSL1444, 71.105% identity (71.307% ungapped) in 353 aa overlap, and to BPSL3312, 68.362% identity (68.362% ungapped) in 354 aa overlap; group 1 glycosyl transferase complement(2910122..2911186) Burkholderia pseudomallei K96243 3091905 YP_109001.1 CDS BPSL2409 NC_006350.1 2911753 2913618 D Similar to Xanthomonas axonopodis ATP binding transporter 1 xac3744 SWALL:AAM38587 (EMBL:AE012024) (591 aa) fasta scores: E(): 2.6e-89, 46.04% id in 582 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase ExsA or atu4728 or AGR_L_309 SWALL:Q8U6S8 (EMBL:AE009401) (600 aa) fasta scores: E(): 4.6e-55, 37.22% id in 583 aa; ABC transporter ATP binding protein 2911753..2913618 Burkholderia pseudomallei K96243 3092643 YP_109002.1 CDS otsA NC_006350.1 2913647 2915056 R Similar to Escherichia coli alpha,alpha-trehalose-phosphate synthase [UDP-forming] OtsA SWALL:OTSA_ECOLI (SWALL:P31677) (473 aa) fasta scores: E(): 1.2e-97, 52.12% id in 470 aa, and to Ralstonia solanacearum probable alpha,alpha-trehalose-phosphate synthase rsp1105 or rs02613 SWALL:Q8XQW3 (EMBL:AL646082) (465 aa) fasta scores: E(): 1.5e-120, 62.39% id in 468 aa. Similar to BPSL1044, 61.864% identity (62.931% ungapped) in 472 aa overlap; alpha,alpha-trehalose-phosphate synthase complement(2913647..2915056) Burkholderia pseudomallei K96243 3092836 YP_109003.1 CDS otsB NC_006350.1 2915053 2915862 R Similar to Escherichia coli trehalose-phosphatase OtsB SWALL:OTSB_ECOLI (SWALL:P31678) (266 aa) fasta scores: E(): 5.8e-32, 45.49% id in 222 aa, and to Ralstonia solanacearum probable trehalose-phosphatase rsp1104 or rs02610 SWALL:Q8XQW4 (EMBL:AL646082) (262 aa) fasta scores: E(): 1.6e-38, 49.6% id in 254 aa. Possible alternative translational start site; trehalose-phosphatase complement(2915053..2915862) Burkholderia pseudomallei K96243 3093035 YP_109004.1 CDS BPSL2412 NC_006350.1 2916222 2916881 D Similar to Neisseria meningitidis lipoprotein nma1767 SWALL:Q9JTI0 (EMBL:AL162757) (217 aa) fasta scores: E(): 7.2e-18, 31.79% id in 217 aa, and to Ralstonia solanacearum probable lipoprotein rsc0373 or rs03341 SWALL:Q8Y2G3 (EMBL:AL646058) (200 aa) fasta scores: E(): 1.2e-17, 35.53% id in 197 aa. CDS is extended at the N-terminus in comparison to R. solanacearum protein and some orthologues; SCO1/SenC family protein 2916222..2916881 Burkholderia pseudomallei K96243 3092644 YP_109005.1 CDS BPSL2413 NC_006350.1 2916908 2917354 D Similar to Vibrio cholerae hypothetical protein vca0037 SWALL:Q9KNC8 (EMBL:AE004347) (150 aa) fasta scores: E(): 1.8e-06, 29.85% id in 134 aa, and to Caulobacter crescentus hypothetical protein cc3502 SWALL:Q9A2Q4 (EMBL:AE006008) (151 aa) fasta scores: E(): 1.8e-06, 31.94% id in 144 aa; hypothetical protein 2916908..2917354 Burkholderia pseudomallei K96243 3093289 YP_109006.1 CDS BPSL2414 NC_006350.1 2917365 2918237 D Weakly similar to Streptomyces coelicolor integral membrane protein sco1215 or 2scg58.15 SWALL:Q9FC98 (EMBL:AL391017) (316 aa) fasta scores: E(): 3.1e-10, 25.71% id in 280 aa, and to the C-terminal region of Mycobacterium leprae hypothetical protein ml1998 SWALL:Y102_MYCLE (SWALL:P53525) (659 aa) fasta scores: E(): 7e-09, 25.08% id in 291 aa; hypothetical protein 2917365..2918237 Burkholderia pseudomallei K96243 3093290 YP_109007.1 CDS BPSL2415 NC_006350.1 2918372 2918875 R Similar to Xanthomonas campestris ElaA protein xcc3490 SWALL:AAM42760 (EMBL:AE012468) (166 aa) fasta scores: E(): 1.9e-20, 45.57% id in 147 aa, and to Pseudomonas aeruginosa hypothetical protein pa0115 SWALL:Q9I717 (EMBL:AE004449) (150 aa) fasta scores: E(): 4.1e-19, 44.21% id in 147 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein complement(2918372..2918875) Burkholderia pseudomallei K96243 3093269 YP_109008.1 CDS BPSL2416 NC_006350.1 2919089 2919955 R Similar to Homo sapiens Pirin, a novel highly conserved nuclear protein, Pir SWALL:PIR_HUMAN (SWALL:O00625) (290 aa) fasta scores: E(): 2.7e-24, 37.59% id in 258 aa, and to Yersinia pestis hypothetical protein ypo2149 SWALL:Q8ZEL5 (EMBL:AJ414151) (289 aa) fasta scores: E(): 7.2e-80, 67.48% id in 286 aa; hypothetical protein complement(2919089..2919955) Burkholderia pseudomallei K96243 3093270 YP_109009.1 CDS BPSL2417 NC_006350.1 2920082 2920990 D Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo2150 SWALL:Q8ZEL4 (EMBL:AJ414151) (301 aa) fasta scores: E(): 2.4e-76, 66% id in 300 aa, and to Salmonella typhimurium, and Salmonella typhi LysR family transcriptional regulator stm0952 or Act or sty0950 SWALL:Q8XET3 (EMBL:AE008740) (303 aa) fasta scores: E(): 1.9e-70, 61.61% id in 297 aa; LysR family transcriptional regulator 2920082..2920990 Burkholderia pseudomallei K96243 3093640 YP_109010.1 CDS BPSL2418 NC_006350.1 2921155 2921667 D Similar to Xanthomonas axonopodis hypothetical protein xac3617 SWALL:AAM38460 (EMBL:AE012012) (162 aa) fasta scores: E(): 4e-38, 65.4% id in 159 aa, and to Xylella fastidiosa hypothetical protein xf1230 SWALL:Q9PDZ8 (EMBL:AE003957) (162 aa) fasta scores: E(): 8.6e-38, 65.56% id in 151 aa; hypothetical protein 2921155..2921667 Burkholderia pseudomallei K96243 3093641 YP_109011.1 CDS BPSL2419 NC_006350.1 2923370 2923963 R Similar to Escherichia coli, and Escherichia coli O157:H7 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA SWALL:PGSA_ECOLI (SWALL:P06978) (181 aa) fasta scores: E(): 7.9e-28, 48.38% id in 186 aa, and to Ralstonia solanacearum probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase transmembrane protein rsc1072 or rs04115 SWALL:Q8Y0H2 (EMBL:AL646062) (191 aa) fasta scores: E(): 1.7e-56, 73.05% id in 193 aa; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2923370..2923963) Burkholderia pseudomallei K96243 3092636 YP_109012.1 CDS uvrC NC_006350.1 2924091 2926328 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(2924091..2926328) Burkholderia pseudomallei K96243 3092637 YP_109013.1 CDS BPSL2421 NC_006350.1 2926537 2927757 D Similar to Ralstonia solanacearum hypothetical protein rsc1070 or rs04117 SWALL:Q8Y0H4 (EMBL:AL646062) (396 aa) fasta scores: E(): 5e-57, 52.95% id in 389 aa, and to Pseudomonas aeruginosa hypothetical protein pa2852 SWALL:Q9HZZ1 (EMBL:AE004711) (376 aa) fasta scores: E(): 2.5e-56, 47.45% id in 373 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 2926537..2927757 Burkholderia pseudomallei K96243 3092949 YP_109014.1 CDS BPSL2422 NC_006350.1 2927947 2928504 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2927947..2928504 Burkholderia pseudomallei K96243 3092950 YP_109015.1 CDS BPSL2423 NC_006350.1 2928775 2930172 D Similar to Ralstonia solanacearum probable sigma-54 interacting response regulator transcription regulator protein rsp1667 or rs02226 SWALL:Q8XPH3 (EMBL:AL646086) (491 aa) fasta scores: E(): 1.1e-34, 48.91% id in 460 aa. C-terminus is similar to the C-terminal region of Escherichia coli propionate catabolism operon regulatory protein PrpR SWALL:PRPR_ECOLI (SWALL:P77743) (528 aa) fasta scores: E(): 3.3e-25, 35.19% id in 341 aa. R. solanacearum is extended at the N-terminus in comparison to CDS; sigma-54 interacting response regulator protein 2928775..2930172 Burkholderia pseudomallei K96243 3092540 YP_109016.1 CDS BPSL2424 NC_006350.1 2930286 2931314 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(2930286..2931314) Burkholderia pseudomallei K96243 3092541 YP_109017.1 CDS acpS NC_006350.1 2931342 2931773 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(2931342..2931773) Burkholderia pseudomallei K96243 3094856 YP_109018.1 CDS pdxJ NC_006350.1 2931779 2932552 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(2931779..2932552) Burkholderia pseudomallei K96243 3094844 YP_109019.2 CDS recO NC_006350.1 2932549 2933409 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(2932549..2933409) Burkholderia pseudomallei K96243 3092366 YP_109020.1 CDS era NC_006350.1 2933396 2934295 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(2933396..2934295) Burkholderia pseudomallei K96243 3093107 YP_109021.1 CDS rnc NC_006350.1 2934365 2935768 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(2934365..2935768) Burkholderia pseudomallei K96243 3092548 YP_109022.1 CDS lepB NC_006350.1 2935919 2936812 R Similar to Escherichia coli signal peptidase I LepB SWALL:LEP_ECOLI (SWALL:P00803) (324 aa) fasta scores: E(): 4.5e-22, 43.43% id in 320 aa, and to Ralstonia solanacearum probable signal peptidase I rsc1061 or rs04147 SWALL:Q8Y0I3 (EMBL:AL646062) (305 aa) fasta scores: E(): 6.2e-77, 64.05% id in 306 aa; signal peptidase I complement(2935919..2936812) Burkholderia pseudomallei K96243 3091965 YP_109023.1 CDS lepA NC_006350.1 2936828 2938621 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(2936828..2938621) Burkholderia pseudomallei K96243 3091676 YP_109024.1 CDS BPSL2432 NC_006350.1 2938862 2939116 R Similar to Neisseria meningitidis thioredoxin nma0966 SWALL:Q9JV75 (EMBL:AL162754) (77 aa) fasta scores: E(): 4.3e-08, 42.1% id in 76 aa. Weakly similar to Corynebacterium nephridii thioredoxin c-1 SWALL:THI1_CORNE (SWALL:P00275) (105 aa) fasta scores: E(): 1.6, 35.18% id in 54 aa; hypothetical protein complement(2938862..2939116) Burkholderia pseudomallei K96243 3094857 YP_109025.1 CDS BPSL2433 NC_006350.1 2939113 2940570 R Similar to Pseudomonas aeruginosa serine protease MucD SWALL:Q57155 (EMBL:U49151) (474 aa) fasta scores: E(): 1.5e-72, 51.08% id in 460 aa, and to Ralstonia solanacearum probable periplasmic protease signal peptide protein rsc1058 or rs04156 SWALL:Q8Y0I6 (EMBL:AL646062) (505 aa) fasta scores: E(): 2.4e-101, 64.25% id in 470 aa; peptidase complement(2939113..2940570) Burkholderia pseudomallei K96243 3094614 YP_109026.1 CDS BPSL2434 NC_006350.1 2940638 2941690 R Similar to Pseudomonas aeruginosa sigma factor AlgU regulatory protein MucB or AlgN SWALL:MUCB_PSEAE (SWALL:P38108) (316 aa) fasta scores: E(): 1.4e-11, 30.31% id in 320 aa, and to Escherichia coli, and Escherichia coli O157:H7 sigma E factor regulatory protein rseb precursor RseB SWALL:RSEB_ECOLI (SWALL:P46186) (318 aa) fasta scores: E(): 0.016, 27.45% id in 306 aa; sigma E factor regulatory protein complement(2940638..2941690) Burkholderia pseudomallei K96243 3094615 YP_109027.1 CDS BPSL2435 NC_006350.1 2941696 2942298 R Similar to Pseudomonas aeruginosa sigma factor AlgU negative regulatory protein MucA SWALL:MUCA_PSEAE (SWALL:P38107) (194 aa) fasta scores: E(): 0.18, 30.61% id in 196 aa, and to Escherichia coli sigma E factor negative regulatory protein RseA or MclA SWALL:RSEA_ECOLI (SWALL:P38106) (216 aa) fasta scores: E(): 0.26, 28.95% id in 221 aa; sigma E factor negative regulatory protein complement(2941696..2942298) Burkholderia pseudomallei K96243 3091492 YP_109028.1 CDS rpoE NC_006350.1 2942382 2942981 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(2942382..2942981) Burkholderia pseudomallei K96243 3092349 YP_109029.1 CDS BPSL2437 NC_006350.1 2943087 2943560 R hypothetical protein complement(2943087..2943560) Burkholderia pseudomallei K96243 3091493 YP_109030.1 CDS fabF NC_006350.1 2943572 2944810 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(2943572..2944810) Burkholderia pseudomallei K96243 3092217 YP_109031.1 CDS acpP NC_006350.1 2944967 2945206 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2944967..2945206) Burkholderia pseudomallei K96243 3092505 YP_109032.1 CDS fabG NC_006350.1 2945350 2946099 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(2945350..2946099) Burkholderia pseudomallei K96243 3091516 YP_109033.1 CDS fabD NC_006350.1 2946150 2947082 R Similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase fabD or TfpA SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 4.4e-56, 54.72% id in 307 aa, and to Ralstonia solanacearum probable malonyl CoA-[acyl-carrier-protein] transacylase rsc1051 or rs04178 SWALL:Q8Y0J3 (EMBL:AL646062) (309 aa) fasta scores: E(): 8.2e-89, 81.31% id in 305 aa; ACP S-malonyltransferase complement(2946150..2947082) Burkholderia pseudomallei K96243 3092873 YP_109034.1 CDS fabH NC_006350.1 2947153 2948142 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(2947153..2948142) Burkholderia pseudomallei K96243 3091517 YP_109035.1 CDS BPSL2443 NC_006350.1 2948142 2949248 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(2948142..2949248) Burkholderia pseudomallei K96243 3094277 YP_109036.1 CDS rpmF NC_006350.1 2949388 2949567 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2949388..2949567) Burkholderia pseudomallei K96243 3092457 YP_109037.1 CDS BPSL2445 NC_006350.1 2949664 2950296 R Similar to Ralstonia solanacearum hypothetical protein rsc1047 or rs04197 SWALL:Q8Y0J7 (EMBL:AL646062) (179 aa) fasta scores: E(): 8e-22, 39.37% id in 193 aa, and to Pseudomonas aeruginosa hypothetical protein pa2971 SWALL:Q9HZN3 (EMBL:AE004723) (178 aa) fasta scores: E(): 1e-05, 27.83% id in 194 aa; hypothetical protein complement(2949664..2950296) Burkholderia pseudomallei K96243 3094278 YP_109038.1 CDS maf NC_006350.1 2950540 2951187 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2950540..2951187 Burkholderia pseudomallei K96243 3092699 YP_109039.1 CDS BPSL2447 NC_006350.1 2951184 2951906 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1045 or rs04205 SWALL:Q8Y0J8 (EMBL:AL646062) (243 aa) fasta scores: E(): 1e-50, 63.26% id in 245 aa, and to Neisseria meningitidis hypothetical protein nmb1908 SWALL:Q9JXS3 (EMBL:AE002540) (241 aa) fasta scores: E(): 5.3e-38, 51.25% id in 240 aa; hypothetical protein 2951184..2951906 Burkholderia pseudomallei K96243 3092700 YP_109040.1 CDS BPSL2448 NC_006350.1 2951945 2952946 R Similar to Pseudomonas aeruginosa probable peptidase pa2973 SWALL:Q9HZN1 (EMBL:AE004723) (326 aa) fasta scores: E(): 2.9e-53, 50.29% id in 338 aa, and to Neisseria meningitidis protease nmb2127 SWALL:Q9JXC3 (EMBL:AE002560) (328 aa) fasta scores: E(): 1.4e-46, 45.88% id in 316 aa; peptidase complement(2951945..2952946) Burkholderia pseudomallei K96243 3092439 YP_109041.1 CDS BPSL2449 NC_006350.1 2952956 2953351 R Similar to Ralstonia solanacearum hypothetical protein rsc1043 or rs04207 SWALL:Q8Y0K0 (EMBL:AL646062) (138 aa) fasta scores: E(): 7.4e-30, 63.93% id in 122 aa. Weakly similar to Burkholderia cepacia biphenyl dioxygenase system ferredoxin component BphF SWALL:BPHF_BURCE (SWALL:P37332) (109 aa) fasta scores: E(): 2.8, 25.8% id in 93 aa; Rieske iron-sulfur protein complement(2952956..2953351) Burkholderia pseudomallei K96243 3092440 YP_109042.1 CDS BPSL2450 NC_006350.1 2953348 2954007 R Similar to Alcaligenes eutrophus plasmid phosphoglycolate phosphatase CbbZp SWALL:GPHP_ALCEU (SWALL:P40853) (231 aa) fasta scores: E(): 5e-07, 31.94% id in 216 aa, and to Ralstonia solanacearum phosphoglycolate phosphatase rsc1042 or rs04208 SWALL:Q8Y0K1 (EMBL:AL646062) (219 aa) fasta scores: E(): 2.2e-53, 69.4% id in 219 aa; haloacid dehalogenase complement(2953348..2954007) Burkholderia pseudomallei K96243 3091435 YP_109043.1 CDS rluC NC_006350.1 2954013 2955020 R Similar to Escherichia coli ribosomal large subunit pseudouridine synthase C RluC SWALL:RLUC_ECOLI (SWALL:P23851) (319 aa) fasta scores: E(): 5.2e-54, 50.94% id in 318 aa, and to Ralstonia solanacearum probable ribosomal large subunit pseudouridine synthase C protein rsc1041 or rs04757 SWALL:Q8Y0K2 (EMBL:AL646062) (331 aa) fasta scores: E(): 2e-84, 70.28% id in 313 aa; ribosomal large subunit pseudouridine synthase C complement(2954013..2955020) Burkholderia pseudomallei K96243 3094628 YP_109044.1 CDS BPSL2452 NC_006350.1 2955743 2959009 D Similar to Escherichia coli ribonuclease E Rne or Ams or Hmp1 or b1084 SWALL:RNE_ECOLI (SWALL:P21513) (1061 aa) fasta scores: E(): 8.5e-87, 44.09% id in 1100 aa, and to Ralstonia solanacearum probable ribonuclease E rsc1040 or rs04210 SWALL:Q8Y0K3 (EMBL:AL646062) (1014 aa) fasta scores: E(): 1.7e-134, 60.6% id in 1122 aa. CDS is extended at the C-terminus in comparison to E. coli protein; ribonuclease E 2955743..2959009 Burkholderia pseudomallei K96243 3091436 YP_109045.1 CDS moaA NC_006350.1 2959179 2960261 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2959179..2960261 Burkholderia pseudomallei K96243 3093570 YP_109046.1 CDS mobA NC_006350.1 2960277 2960918 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2960277..2960918 Burkholderia pseudomallei K96243 3093571 YP_109047.1 CDS BPSL2455 NC_006350.1 2961030 2962328 D Similar to Escherichia coli molybdopterin biosynthesis protein MoeA or ChlE or BisB or NarE or b0827 SWALL:MOEA_ECOLI (SWALL:P12281) (411 aa) fasta scores: E(): 1.4e-55, 44.31% id in 413 aa, and to Ralstonia solanacearum probable molybdopterin biosynthesis protein rsc1037 or rs04213 SWALL:Q8Y0K6 (EMBL:AL646062) (429 aa) fasta scores: E(): 4.9e-79, 56.35% id in 433 aa; molybdopterin biosynthesis protein 2961030..2962328 Burkholderia pseudomallei K96243 3093051 YP_109048.1 CDS BPSL2456 NC_006350.1 2962365 2962652 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1036 or rs04214 SWALL:Q8Y0K7 (EMBL:AL646062) (101 aa) fasta scores: E(): 1.6e-15, 55.31% id in 94 aa; hypothetical protein 2962365..2962652 Burkholderia pseudomallei K96243 3093052 YP_109049.1 CDS BPSL2457 NC_006350.1 2962649 2963152 D Similar to Sus scrofa diamine acetyltransferase SAT SWALL:ATDA_PIG (SWALL:Q28999) (171 aa) fasta scores: E(): 3.3e-17, 35.36% id in 164 aa, and to Ralstonia solanacearum acetyltransferase rsc2565 or rs00758 SWALL:Q8XWA9 (EMBL:AL646070) (177 aa) fasta scores: E(): 1.2e-32, 56.86% id in 153 aa; acetyltransferase 2962649..2963152 Burkholderia pseudomallei K96243 3091637 YP_109050.1 CDS BPSL2458 NC_006350.1 2963387 2964862 R No significant database matches to the full length CDS. C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc1035 or rs04215 SWALL:Q8Y0K8 (EMBL:AL646062) (457 aa) fasta scores: E(): 8.6e-103, 70.87% id in 460 aa, and Xanthomonas axonopodis hypothetical protein xac4348 SWALL:AAM39178 (EMBL:AE012089) (480 aa) fasta scores: E(): 2.1e-76, 55.12% id in 468 aa; hypothetical protein complement(2963387..2964862) Burkholderia pseudomallei K96243 3091638 YP_109051.1 CDS BPSL2459 NC_006350.1 2964859 2965848 R Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase complement(2964859..2965848) Burkholderia pseudomallei K96243 3091694 YP_109052.1 CDS BPSL2460 NC_006350.1 2965914 2967356 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1033 or rs04217 SWALL:Q8Y0L0 (EMBL:AL646062) (478 aa) fasta scores: E(): 4.4e-116, 66.95% id in 454 aa, and to Neisseria meningitidis hypothetical protein nmb0570 SWALL:Q9K0M2 (EMBL:AE002413) (473 aa) fasta scores: E(): 5e-101, 58.51% id in 458 aa; hypothetical protein complement(2965914..2967356) Burkholderia pseudomallei K96243 3091695 YP_109053.1 CDS BPSL2461 NC_006350.1 2967412 2968134 R Similar to Ralstonia solanacearum transmembrane protein rsc1032 or rs04218 SWALL:Q8Y0L1 (EMBL:AL646062) (243 aa) fasta scores: E(): 6.5e-49, 60.96% id in 228 aa, and to Bacillus halodurans hypothetical protein bh1834 SWALL:Q9KBU0 (EMBL:AP001513) (230 aa) fasta scores: E(): 4.3e-08, 30.38% id in 237 aa; hypothetical protein complement(2967412..2968134) Burkholderia pseudomallei K96243 3091462 YP_109054.1 CDS BPSL2462 NC_006350.1 2968219 2969418 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(2968219..2969418) Burkholderia pseudomallei K96243 3091463 YP_109055.1 CDS BPSL2463 NC_006350.1 2969687 2970010 D Similar to Pseudomonas stutzeri ferredoxin SWALL:FER_PSEST (SWALL:P08811) (106 aa) fasta scores: E(): 1.7e-27, 66.98% id in 106 aa, and to Ralstonia solanacearum probable ferredoxin protein rsc1114 or rs04001 SWALL:Q8Y0D0 (EMBL:AL646062) (108 aa) fasta scores: E(): 1.5e-33, 80.73% id in 109 aa. Similar to BPSL2210, 64.220% identity (65.421% ungapped) in 109 aa overlap; ferredoxin 2969687..2970010 Burkholderia pseudomallei K96243 3092680 YP_109056.1 CDS BPSL2464 NC_006350.1 2970498 2970977 D Similar to Ralstonia solanacearum CreA signal peptide protein rsc1471 or rs03836 SWALL:Q8XZD0 (EMBL:AL646064) (169 aa) fasta scores: E(): 6.2e-42, 72.36% id in 152 aa, and to Pseudomonas aeruginosa hypothetical protein pa4564 SWALL:Q9HVM0 (EMBL:AE004870) (154 aa) fasta scores: E(): 6.4e-29, 55.4% id in 148 aa; hypothetical protein 2970498..2970977 Burkholderia pseudomallei K96243 3092681 YP_109057.1 CDS BPSL2465 NC_006350.1 2971428 2972330 D hypothetical protein 2971428..2972330 Burkholderia pseudomallei K96243 3091989 YP_109058.1 CDS BPSL2466 NC_006350.1 2972515 2973039 R No significant database matches. CDS is alanine rich and contains a polar C-terminal region; hypothetical protein complement(2972515..2973039) Burkholderia pseudomallei K96243 3091990 YP_109059.1 CDS BPSL2467 NC_006350.1 2973359 2973580 D Similar to Ralstonia solanacearum hypothetical protein rsc0789 or rs05048 SWALL:Q8Y1A1 (EMBL:AL646061) (73 aa) fasta scores: E(): 5.3e-17, 66.66% id in 72 aa, and to Xanthomonas campestris hypothetical protein xcc2645 SWALL:AAM41917 (EMBL:AE012376) (80 aa) fasta scores: E(): 1.2e-12, 62.31% id in 69 aa; hypothetical protein 2973359..2973580 Burkholderia pseudomallei K96243 3094001 YP_109060.1 CDS norM NC_006350.1 2973705 2975111 D Similar to Burkholderia vietnamiensis probable multidrug resistance protein NorM SWALL:NORM_BURVI (SWALL:Q9F5N7) (462 aa) fasta scores: E(): 4.5e-140, 83.62% id in 458 aa, and to Rhizobium loti multidrug efflux protein mll4906 SWALL:Q98D15 (EMBL:AP003005) (467 aa) fasta scores: E(): 2.5e-52, 38.41% id in 453 aa; multidrug resistance protein 2973705..2975111 Burkholderia pseudomallei K96243 3091686 YP_109061.1 CDS fumC NC_006350.1 2975700 2977094 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2975700..2977094 Burkholderia pseudomallei K96243 3091813 YP_109062.1 CDS BPSL2470 NC_006350.1 2977573 2978079 R Similar to Vibrio cholerae acyl-CoA thioester hydrolase-related protein vca0941 SWALL:Q9KL09 (EMBL:AE004421) (162 aa) fasta scores: E(): 3.7e-29, 54% id in 150 aa, and to Xanthomonas campestris acyl-CoA thioester hydrolase xcc2593 SWALL:AAM41865 (EMBL:AE012371) (163 aa) fasta scores: E(): 8.1e-28, 52.74% id in 146 aa; long-chain acyl-CoA thioester hydrolase complement(2977573..2978079) Burkholderia pseudomallei K96243 3094002 YP_109063.1 CDS BPSL2470A NC_006350.1 2978301 2978495 R Similar to the N-terminal region of Streptomyces coelicolor ABC transporter binding lipoprotein sc1a2.25C SWALL:Q9L216 (EMBL:AL939129) (290 aa) fasta scores: E(): 7.1, 62.5% id in 24 aa; hypothetical protein complement(2978301..2978495) Burkholderia pseudomallei K96243 3092571 YP_109064.1 CDS BPSL2471 NC_006350.1 2979129 2979839 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0279 SWALL:Q9I6L1 (EMBL:AE004466) (232 aa) fasta scores: E(): 7.6e-45, 56.01% id in 216 aa, and to Rhizobium loti transcriptional regulator mlr4605 SWALL:Q98DP9 (EMBL:AP003004) (224 aa) fasta scores: E(): 7.2e-28, 41.96% id in 224 aa; transcription regulator ArsR 2979129..2979839 Burkholderia pseudomallei K96243 3092572 YP_109065.1 CDS BPSL2472 NC_006350.1 2979995 2982568 D Similar to Ralstonia solanacearum prolin-rich transmembrane protein rsc3315 or rs02545 SWALL:Q8XU78 (EMBL:AL646074) (787 aa) fasta scores: E(): 3.3e-65, 45.09% id in 825 aa; proline-rich exported protein 2979995..2982568 Burkholderia pseudomallei K96243 3094643 YP_109066.1 CDS thyA NC_006350.1 2982658 2983629 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(2982658..2983629) Burkholderia pseudomallei K96243 3094644 YP_109067.1 CDS BPSL2474 NC_006350.1 2983686 2985071 R Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG or b4004 SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 1.4e-48, 40% id in 430 aa, and to Ralstonia solanacearum sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 1.7e-88, 55.75% id in 443 aa. Similar to BPSL2475, 61.674% identity (62.780% ungapped) in 454 aa overlap, and to BPSL0609, 58.652% identity (60.277% ungapped) in 445 aa overlap; sigma-54 interacting regulatory protein complement(2983686..2985071) Burkholderia pseudomallei K96243 3093920 YP_109068.1 CDS BPSL2474A NC_006350.1 2985594 2985962 D Poor database matches. Weakly similar to Rhizobium loti hypothetical protein MLL1184 SWALL:Q98L44 (EMBL:AP002996) (143 aa) fasta scores: E(): 6, 35.71% id in 70 aa; hypothetical protein 2985594..2985962 Burkholderia pseudomallei K96243 3093921 YP_109069.1 CDS BPSL2474B NC_006350.1 2985959 2987236 D Poor database matches. Weakly similar to the C-terminal region of Streptomyces aureofaciens synthase PhaC SWALL:Q8GFF3 (EMBL:AY032926) (813 aa) fasta scores: E(): 0.0036, 28.86% id in 433 aa; hypothetical protein 2985959..2987236 Burkholderia pseudomallei K96243 3094231 YP_109070.1 CDS BPSL2475 NC_006350.1 2987882 2989342 D Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG or b4004 SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 2.3e-45, 39.39% id in 429 aa, and to Ralstonia solanacearum sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 2.3e-84, 53.62% id in 442 aa. Similar to BPSL2474,61.504% identity (62.054% ungapped) in 452 aa overlap, and to BPSL0609, 55.928% identity (57.208% ungapped) in 447 aa overlap. CDS is extended at the N-terminus in comparison to orthologuesand paralogues; sigma-54 dependent regulatory protein 2987882..2989342 Burkholderia pseudomallei K96243 3094232 YP_109071.1 CDS BPSL2476 NC_006350.1 2989550 2990053 D Similar to Escherichia coli dihydrofolate reductase FolA or TmrA or b0048 SWALL:DYR_ECOLI (SWALL:P00379) (159 aa) fasta scores: E(): 4e-22, 45.34% id in 161 aa, and to Ralstonia solanacearum probable dihydrofolate reductase oxidoreductase rsc0946 or rs04449 SWALL:Q8Y0U7 (EMBL:AL646061) (167 aa) fasta scores: E(): 1.2e-42, 72.39% id in 163 aa; dihydrofolate reductase 2989550..2990053 Burkholderia pseudomallei K96243 3094259 YP_109072.1 CDS BPSL2477 NC_006350.1 2990180 2991643 D Similar to Thermoanaerobacter tengcongensis transposase TTE0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 3.2e-74, 43.54% id in 457 aa, and to Pseudomonas sp. transposase TnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 1.6e-32, 31.09% id in 476 aa; transposase 2990180..2991643 Burkholderia pseudomallei K96243 3094260 YP_109073.1 CDS BPSL2478 NC_006350.1 2991780 2993150 R Similar to Escherichia coli, and Escherichia coli O157:H7 PmbA protein b4235 or z5845 or ecs5212 SWALL:PMBA_ECOLI (SWALL:P24231) (450 aa) fasta scores: E(): 1e-74, 47.65% id in 426 aa, and to Ralstonia solanacearum PmbA protein rsc0945 or rs04460 SWALL:Q8Y0U8 (EMBL:AL646061) (457 aa) fasta scores: E(): 1.3e-136, 75.71% id in 457 aa; microcin-processing peptidase complement(2991780..2993150) Burkholderia pseudomallei K96243 3094761 YP_109074.1 CDS BPSL2479 NC_006350.1 2993296 2993904 D Similar to Ralstonia solanacearum hypothetical protein rsc0944 or rs04461 SWALL:Q8Y0U9 (EMBL:AL646061) (208 aa) fasta scores: E(): 2.8e-32, 52.65% id in 207 aa, and to Vibrio cholerae hypothetical protein vc2536 SWALL:Q9KP43 (EMBL:AE004323) (193 aa) fasta scores: E(): 2.9e-18, 38.91% id in 203 aa; hypothetical protein 2993296..2993904 Burkholderia pseudomallei K96243 3094762 YP_109075.1 CDS mogA NC_006350.1 2993885 2994505 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 2993885..2994505 Burkholderia pseudomallei K96243 3092304 YP_109076.1 CDS orn NC_006350.1 2994786 2995391 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(2994786..2995391) Burkholderia pseudomallei K96243 3093419 YP_109077.1 CDS BPSL2482 NC_006350.1 2995510 2996769 D Similar to Arabidopsis thaliana CAAX processing zinc-metallo endoprotease STE24 SWALL:Q94FS8 (EMBL:AF353722) (424 aa) fasta scores: E(): 1.5e-35, 32.93% id in 413 aa, and to Ralstonia solanacearum probable integral membrane protease transmembrane protein rsc0941 or rs04465 SWALL:Q8Y0V2 (EMBL:AL646061) (418 aa) fasta scores: E(): 1.4e-106, 64.89% id in 413 aa; peptidase 2995510..2996769 Burkholderia pseudomallei K96243 3092309 YP_109078.1 CDS BPSL2483 NC_006350.1 2996766 2997710 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 2996766..2997710 Burkholderia pseudomallei K96243 3092310 YP_109079.1 CDS BPSL2484 NC_006350.1 2997779 2998096 D Similar to Ralstonia solanacearum hypothetical protein rsc0939 or rs04472 SWALL:Q8Y0V4 (EMBL:AL646061) (104 aa) fasta scores: E(): 1.5e-12, 40.4% id in 99 aa, and to Vibrio cholerae hypothetical protein vc1724 SWALL:Q9KRB8 (EMBL:AE004250) (103 aa) fasta scores: E(): 3.9e-06, 31.86% id in 91 aa; hypothetical protein 2997779..2998096 Burkholderia pseudomallei K96243 3091634 YP_109080.1 CDS BPSL2485 NC_006350.1 2998263 2999252 R catalyzes the formation of adenosylcobinamide-phosphate from adenosylcobyric acid; CobD/CbiB family protein complement(2998263..2999252) Burkholderia pseudomallei K96243 3091635 YP_109081.1 CDS BPSL2486 NC_006350.1 2999302 2999985 R Similar to Ralstonia solanacearum hypothetical protein rsc0937 or rs04477 SWALL:Q8Y0V6 (EMBL:AL646061) (202 aa) fasta scores: E(): 4.9e-42, 60.69% id in 201 aa, and to Brucella melitensis phosphohydrolase bmei0462 SWALL:Q8YII2 (EMBL:AE009489) (207 aa) fasta scores: E(): 8.2e-29, 48.5% id in 200 aa; hypothetical protein complement(2999302..2999985) Burkholderia pseudomallei K96243 3093023 YP_109082.1 CDS BPSL2487 NC_006350.1 3000900 3001490 D hypothetical protein 3000900..3001490 Burkholderia pseudomallei K96243 3093024 YP_109083.1 CDS tnpA NC_006350.1 3001719 3002939 R Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 3.6e-138, 78.32% id in 406 aa, and to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.8e-162, 99.22% id in 386 aa. CDS is extended at the N-terminus in comparison to B. mallei protein; transposase complement(3001719..3002939) Burkholderia pseudomallei K96243 3093019 YP_109084.1 CDS rplS NC_006350.1 3003117 3003506 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(3003117..3003506) Burkholderia pseudomallei K96243 3094791 YP_109085.1 CDS trmD NC_006350.1 3003644 3004438 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(3003644..3004438) Burkholderia pseudomallei K96243 3093676 YP_109086.1 CDS rimM NC_006350.1 3004440 3005075 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(3004440..3005075) Burkholderia pseudomallei K96243 3094627 YP_109087.1 CDS rpsP NC_006350.1 3005174 3005428 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(3005174..3005428) Burkholderia pseudomallei K96243 3094357 YP_109088.1 CDS BPSL2493 NC_006350.1 3005644 3006762 D Similar to C-terminal region of Acetobacter liquefaciens L-sorbosone dehydrogenase SWALL:SNDH_ACELI (SWALL:Q44091) (449 aa) fasta scores: E(): 1.7e-22, 30.9% id in 385 aa, and to the full length Ralstonia solanacearum membrane-bound dehydrogenase oxidoreductase rsc0932 or rs04482 SWALL:Q8Y0W1 (EMBL:AL646061) (357 aa) fasta scores: E(): 3e-99, 68.87% id in 347 aa; hypothetical protein 3005644..3006762 Burkholderia pseudomallei K96243 3093825 YP_109089.1 CDS BPSL2494 NC_006350.1 3006869 3007336 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0929 or rs04485 SWALL:Q8Y0W4 (EMBL:AL646061) (151 aa) fasta scores: E(): 1.1e-29, 56.66% id in 150 aa; hypothetical protein 3006869..3007336 Burkholderia pseudomallei K96243 3093826 YP_109090.1 CDS BPSL2495 NC_006350.1 3007371 3008528 R Similar to Ralstonia solanacearum hypothetical protein rsc0928 or rs04486 SWALL:Q8Y0W5 (EMBL:AL646061) (375 aa) fasta scores: E(): 2.3e-86, 64.73% id in 363 aa, and to Xanthomonas campestris hypothetical protein xcc0015 SWALL:AAM39334 (EMBL:AE012094) (364 aa) fasta scores: E(): 1.2e-80, 58.37% id in 370 aa. Possible alternative translational start site; hypothetical protein complement(3007371..3008528) Burkholderia pseudomallei K96243 3092450 YP_109091.1 CDS lrp NC_006350.1 3008637 3009125 R Similar to Escherichia coli, Escherichia coli O157:H7, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 3.9e-31, 55.55% id in 153 aa, and to Ralstonia solanacearum probable leucine-responsive regulatory DNA-binding transcription regulator protein rsc0927 or rs04487 SWALL:Q8Y0W6 (EMBL:AL646061) (165 aa) fasta scores: E(): 1.8e-46, 77.3% id in 163 aa; leucine-responsive regulatory protein complement(3008637..3009125) Burkholderia pseudomallei K96243 3092406 YP_109092.1 CDS dadA NC_006350.1 3009273 3010559 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 3009273..3010559 Burkholderia pseudomallei K96243 3091489 YP_109093.1 CDS BPSL2498 NC_006350.1 3010673 3012463 R Similar to Solanum tuberosum isovaleryl-CoA dehydrogenase 1, mitochondrial precursor IVD1 SWALL:Q9FS88 (EMBL:AJ278987) (412 aa) fasta scores: E(): 4.5e-10, 26.66% id in 450 aa. N-terminal region is weakly similar to Solanum tuberosum isovaleryl-CoA dehydrogenase 1, mitochondrial precursor IVD1 SWALL:Q9FS88 (EMBL:AJ278987) (412 aa) fasta scores: E(): 4.5e-10, 26.66% id in 450 aa; acyl-CoA dehydrogenase complement(3010673..3012463) Burkholderia pseudomallei K96243 3092451 YP_109094.1 CDS etfA NC_006350.1 3012577 3013512 R Similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SWALL:ETFA_BRAJA (SWALL:P53573) (314 aa) fasta scores: E(): 5.7e-63, 65.59% id in 311 aa, and to Ralstonia solanacearum probable electron transfer flavoprotein etfa or rsc0924 or rs04490 SWALL:Q8Y0W9 (EMBL:AL646061) (311 aa) fasta scores: E(): 2e-80, 81.34% id in 311 aa; electron transfer flavoprotein subunit alpha complement(3012577..3013512) Burkholderia pseudomallei K96243 3092905 YP_109095.1 CDS etfB NC_006350.1 3013528 3014277 R Similar to Bradyrhizobium japonicum electron transfer flavoprotein beta-subunit EtfB or EtfS SWALL:ETFB_BRAJA (SWALL:P53575) (249 aa) fasta scores: E(): 3.4e-55, 69.47% id in 249 aa, and to Ralstonia solanacearum probable electron transfer flavoprotein EtfB or rsc0923 or rs04491 SWALL:Q8Y0X0 (EMBL:AL646061) (249 aa) fasta scores: E(): 1.4e-70, 85.14% id in 249 aa; electron transfer flavoprotein subunit beta complement(3013528..3014277) Burkholderia pseudomallei K96243 3091793 YP_109096.1 CDS BPSL2501 NC_006350.1 3014504 3015298 R Similar to Ralstonia solanacearum probable signal peptide protein rsc0922 or rs04493 SWALL:Q8Y0X1 (EMBL:AL646061) (266 aa) fasta scores: E(): 4.2e-62, 64.28% id in 266 aa and to Salmonella typhimurium D-methionine-binding lipoprotein MetQ precursor or stm0245 SWALL:METQ_SALTY (SWALL:Q8ZRN1) (271 aa) fasta scores: E(): 4.4e-42, 48.31% id in 267 aa; hypothetical protein complement(3014504..3015298) Burkholderia pseudomallei K96243 3094263 YP_109097.1 CDS BPSL2502 NC_006350.1 3015372 3016025 R Similar to Vibrio cholerae probable D-methionine transport system permease MetI or vc0906 SWALL:METI_VIBCH (SWALL:Q9KTJ6) (225 aa) fasta scores: E(): 7.6e-42, 59.71% id in 211 aa, Ralstonia solanacearum probable transmembrane ABC transporter protein rsc0921 or rs04492 SWALL:Q8Y0X2 (EMBL:AL646061) (217 aa) fasta scores: E(): 5.3e-55, 77.41% id in 217 aa, and to Escherichia coli D-methionine transport system permease MetI or b0198 SWALL:METI_ECOLI (SWALL:P31547) (217 aa) fasta scores: E(): 1.6e-36, 54.83% id in 217 aa; ABC transporter membrane permease complement(3015372..3016025) Burkholderia pseudomallei K96243 3094264 YP_109098.1 CDS metN NC_006350.1 3016015 3017049 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(3016015..3017049) Burkholderia pseudomallei K96243 3092979 YP_109099.1 CDS BPSL2504 NC_006350.1 3017358 3018200 D Weakly similar to several Prokaryotic and Eukaryotic hydrolases including: Mycobacterium tuberculosis possibl oxidoreductase rv0183 or mtci28.23 or mt0192 SWALL:O07427 (EMBL:Z97050) (323 aa) fasta scores: E(): 4.9e-30, 41.01% id in 256 a and to Mus musculus monoglyceride lipase mglL SWALL:O35678 (EMBL:AJ001118) (303 aa) fasta scores: E(): 1.5e-23, 33.33% id in 282 aa; hydrolase 3017358..3018200 Burkholderia pseudomallei K96243 3092980 YP_109100.1 CDS BPSL2505 NC_006350.1 3018543 3019466 R Similar to many histone deacetylase-family proteins including: Ralstonia solanacearum hypothetical protein rsc0919 or rs04494 SWALL:Q8Y0X4 (EMBL:AL646061) (307 aa) fasta scores: E(): 4.5e-88, 68.19% id in 305 aa and to Xanthomonas axonopodis acetoin utilization family protein xac0869 SWALL:AAM35757 (EMBL:AE011718) (303 aa) fasta scores: E(): 5.7e-52, 47.5% id in 301 aa; histone deacetylase-family protein complement(3018543..3019466) Burkholderia pseudomallei K96243 3094456 YP_109101.1 CDS BPSL2506 NC_006350.1 3019594 3020946 D Similar in the C-terminus to several e.g. Ralstonia solanacearum membrane-bound lytic murein transglycosylase B protein MltB or rsc0918 or rs04496 SWALL:Q8Y0X5 (EMBL:AL646061) (372 aa) fasta scores: E(): 9.6e-71, 62.57% id in 326 aa and to Escherichia coli membrane-bound lytic murein transglycosylase B protein MltB or b2701 SWALL:MLTB_ECOLI (SWALL:P41052) (361 aa) fasta scores: E(): 1.6e-26, 37.26% id in 373 aa. Note contains 4xqs and 7xqp repeats between codons 68-89; exported transglycosylase 3019594..3020946 Burkholderia pseudomallei K96243 3094457 YP_109102.1 CDS cysM NC_006350.1 3021173 3022075 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(3021173..3022075) Burkholderia pseudomallei K96243 3092757 YP_109103.1 CDS BPSL2507A NC_006350.1 3022087 3022398 R Doubtful CDS. Poor database matches. Similar to Aeropyrum pernix hypothetical protein ape0269 SWALL:Q9YFH7 (EMBL:AP000058) (125 aa) fasta scores: E(): 1, 31.42% id in 105 aa; hypothetical protein complement(3022087..3022398) Burkholderia pseudomallei K96243 3093096 YP_109104.1 CDS BPSL2508 NC_006350.1 3022411 3022728 R Similar to Neisseria gonorrhoeae hypothetical DNA-binding proein ComE SWALL:Q9EU10 (EMBL:AF268317) (99 aa) fasta scores: E(): 7.6e-06, 37.5% id in 104 aa and to Ralstonia solanacearum ComEA-related signal peptide protein rsc0916 or rs04499 SWALL:Q8Y0X7 (EMBL:AL646061) (105 aa) fasta scores: E(): 8.4e-13, 50.94% id in 106 aa; hypothetical protein complement(3022411..3022728) Burkholderia pseudomallei K96243 3093097 YP_109105.1 CDS gmhD NC_006350.1 3022800 3023792 R Previously sequenced as Burkholderia pseudomallei ADP-glycero-mannoheptose epimerase GmhD SWALL:Q9WWX6 (EMBL:AF159428) (330 aa) fasta scores: E(): 3.6e-132, 99.09% id in 330 aa, and to Escherichia coli. Highly similar to Escherichia coli O157:H7 ADP-L-glycero-D-manno-heptose-6-epimerase RfaD or Htrm or b3619 or z5046 or ecs4497 SWALL:RFAD_ECOLI (SWALL:P17963) (310 aa) fasta scores: E(): 2.4e-52, 57.36% id in 326 aa; ADP-glycero-mannoheptose epimerase complement(3022800..3023792) Burkholderia pseudomallei K96243 3092933 YP_109106.1 CDS waaE NC_006350.1 3023851 3024774 R Previously sequenced as Burkholderia pseudomallei ADP-heptose synthase WaaE SWALL:Q9WWX7 (EMBL:AF159428) (307 aa) fasta scores: E(): 3.8e-113, 100% id in 307 aa, and to Haemophilus influenzae ADP-heptose synthase RfaE or WaaE or hi1526 SWALL:RFAE_HAEIN (SWALL:O05074) (476 aa) fasta scores: E(): 9.1e-47, 49% id in 302 aa and to Escherichia coli ADP-heptose synthase RfaE or waae or b3052 SWALL:RFAE_ECOLI (SWALL:P76658) (477 aa) fasta scores: E(): 8.8e-46, 49.19% id in 309 aa; ADP-heptose synthase complement(3023851..3024774) Burkholderia pseudomallei K96243 3093377 YP_109107.1 CDS udg NC_006350.1 3024806 3026206 R Highly similar to the previously sequenced Burkholderia pseudomallei UDP-glucose dehydrogenase Udg SWALL:Q9WWX8 (EMBL:AF159428) (466 aa) fasta scores: E(): 1.1e-178, 99.35% id in 466 aa, and to Pseudomonas aeruginosa UDP-glucose 6-dehydrogenase Udg or pa2022 SWALL:UDG_PSEAE (SWALL:O86422) (453 aa) fasta scores: E(): 2.6e-86, 53.39% id in 457 aa. Note: Also similar to BPSS1833 (474 aa) fasta scores: E(): 1.5e-121, 76.304% identity in 460 aa overlap; UDP-glucose dehydrogenase complement(3024806..3026206) Burkholderia pseudomallei K96243 3093002 YP_109108.1 CDS BPSL2512 NC_006350.1 3026327 3027496 R Similar to many including : Ralstonia solanacearum transmembrane protein rsc0912 or rs04503 SWALL:Q8Y0Y1 (EMBL:AL646061) (425 aa) fasta scores: E(): 1.8e-71, 56.62% id in 415 aa and Neisseria meningitidis periplasmic hypothetical protein Nma2148 SWALL:Q9JST2 (EMBL:AL162758) (389 aa) fasta scores: E(): 1.2e-49, 35.99% id in 389 aa; tetratricopeptide repeat protein complement(3026327..3027496) Burkholderia pseudomallei K96243 3093004 YP_109109.1 CDS BPSL2513 NC_006350.1 3027549 3028064 R hypothetical protein complement(3027549..3028064) Burkholderia pseudomallei K96243 3093005 YP_109110.1 CDS ihfB NC_006350.1 3028067 3028390 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(3028067..3028390) Burkholderia pseudomallei K96243 3094858 YP_109111.1 CDS rpsA NC_006350.1 3028413 3030125 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3028413..3030125) Burkholderia pseudomallei K96243 3093073 YP_109112.1 CDS cmk NC_006350.1 3030270 3030980 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(3030270..3030980) Burkholderia pseudomallei K96243 3092045 YP_109113.2 CDS aroA/tyrA NC_006350.1 3030977 3032998 R fusion of tyrA/aroA; bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase complement(3030977..3032998) Burkholderia pseudomallei K96243 3093876 YP_109114.1 CDS pheA NC_006350.1 3033465 3034547 R Similar to many involved in Phenylalanine biosynthesis: Neisseria gonorrhoeae P-protein [includes: chorismate mutase (EC 5.4.99.5) (cm); prephenate dehydratase (EC 4.2.1.51) (pdt)] PheA SWALL:PHEA_NEIGO (SWALL:Q9ZHY3) (362 aa) fasta scores: E(): 1.8e-64, 50% id in 362 aa, Ralstonia solanacearum probable bifunctional protein: chorismate mutase and prephenate dehydratase PheA or rsc0904 or rs04511 SWALL:Q8Y0Y9 (EMBL:AL646061) (371 aa) fasta scores: E(): 9.6e-85, 61.45% id in 358 aa and to Pseudomonas stutzeri p-protein PheA SWALL:PHEA_PSEST (SWALL:P27603) (365 aa) fasta scores: E(): 3.4e-60, 47.2% id in 358 aa; chorismate mutase/prephenate dehydratase complement(3033465..3034547) Burkholderia pseudomallei K96243 3092972 YP_109115.1 CDS serC NC_006350.1 3034582 3035664 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(3034582..3035664) Burkholderia pseudomallei K96243 3094241 YP_109116.1 CDS BPSL2520 NC_006350.1 3035838 3036434 R Weakyl similar to several including: Ralstonia solanacearum probable signal peptide protein rsc0902 or rs04513 SWALL:Q8Y0Z1 (EMBL:AL646061) (190 aa) fasta scores: E(): 2e-24, 49.48% id in 194 aa and to Candidatus Tremblaya princeps hypothetical protein SWALL:AAM75970 (EMBL:AF481102) (343 aa) fasta scores: E(): 4.3e-07, 29.03% id in 155 aa; hypothetical protein complement(3035838..3036434) Burkholderia pseudomallei K96243 3092000 YP_109117.1 CDS gyrA NC_006350.1 3036533 3039133 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(3036533..3039133) Burkholderia pseudomallei K96243 3092481 YP_109118.1 CDS ompA NC_006350.1 3039644 3040318 D Similar to Bordetella avium outer membrane protein A precursor OmpA SWALL:OMPA_BORAV (SWALL:Q05146) (194 aa) fasta scores: E(): 4e-30, 50% id in 218 aa and to Escherichia coli, and Escherichia coli O157:H7 outer membrane protein a precursor OmpA or TolG or z1307 or ecs1041 SWALL:OMPA_ECOLI (SWALL:P02934) (346 aa) fasta scores: E(): 4.2e-22, 53.47% id in 144 aa; outer membrane protein a 3039644..3040318 Burkholderia pseudomallei K96243 3093812 YP_109119.1 CDS ubiG NC_006350.1 3040487 3041185 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3040487..3041185 Burkholderia pseudomallei K96243 3094669 YP_109120.1 CDS BPSL2524 NC_006350.1 3041211 3041936 D Similar to Pseudomonas aeruginosa phosphoglycolate phosphatase 2 Gph2 or pa3172 SWALL:GPH2_PSEAE (SWALL:Q9HZ62) (226 aa) fasta scores: E(): 1.5e-25, 39.43% id in 213 aa, and to Ralstonia solanacearum probable hydrolase rsc0897 or rs04518 SWALL:Q8Y0Z6 (EMBL:AL646061) (229 aa) fasta scores: E(): 3.2e-47, 62.03% id in 216 aa; phosphatase 3041211..3041936 Burkholderia pseudomallei K96243 3092001 YP_109121.1 CDS BPSL2525 NC_006350.1 3042586 3043272 D Similar to several including: Rhizobium loti hypothetical protein Mlr5374 SWALL:Q98BY6 (EMBL:AP003006) (199 aa) fasta scores: E(): 9.8e-26, 47.36% id in 190 aa and to Bradyrhizobium japonicum pPmtA protein pmtA SWALL:Q9LCT2 (EMBL:Y09633) (199 aa) fasta scores: E(): 9.8e-20, 42.28% id in 201 aa; hypothetical protein 3042586..3043272 Burkholderia pseudomallei K96243 3094167 YP_109122.1 CDS BPSL2526 NC_006350.1 3043453 3043716 R hypothetical protein complement(3043453..3043716) Burkholderia pseudomallei K96243 3094168 YP_109123.1 CDS BPSL2527 NC_006350.1 3043818 3044924 R Similar to Ralstonia solanacearum hypothetical protein rsc2092 or rs03657 SWALL:Q8XXM1 (EMBL:AL646068) (366 aa) fasta scores: E(): 9.6e-27, 33.14% id in 362 aa.Similar to the C-terminal region of Clostridium acetobutylicum molybdopterin biosynthesis enzyme, MoeA, fused to molibdopterin-binding domain cac2020 SWALL:Q97HJ1 (EMBL:AE007706) (636 aa) fasta scores: E(): 1.1e-16, 31.02% id in 303 aa. Note contains an N-terminal DNA-binding protein; regulatory protein complement(3043818..3044924) Burkholderia pseudomallei K96243 3093218 YP_109124.1 CDS fdsG NC_006350.1 3045013 3045528 D Similar to Rhizobium meliloti NADH dehydrogenase I chain E 2 NuoE2 or ra0830 or sma1526 SWALL:NUE2_RHIME (SWALL:P56910) (168 aa) fasta scores: E(): 1.2e-08, 30.37% id in 135 aa and to Alcaligenes eutrophus NAD-dependent formate dehydrogenase gamma subunit FdsG SWALL:O87813 (EMBL:AJ223295) (176 aa) fasta scores: E(): 3.1e-22, 48.05% id in 154 aa; NAD-dependent formate dehydrogenase subunit gamma 3045013..3045528 Burkholderia pseudomallei K96243 3091500 YP_109125.1 CDS fdsB NC_006350.1 3045525 3047090 D Similar to many including: Rhizobium loti NAD-dependent formate dehydrogenase beta subunit mll5397 SWALL:Q98BW8 (EMBL:AP003006) (518 aa) fasta scores: E(): 2.5e-125, 60.82% id in 508 aa, Alcaligenes eutrophus NAD-dependent formate dehydrogenase beta subunit FdsB SWALL:O87814 (EMBL:AJ223295) (520 aa) fasta scores: E(): 4.2e-139, 69.38% id in 516 aa and to Rhizobium meliloti NADH dehydrogenase I chain F 2 NuoF2 or ra0829 or sma1525 SWALL:NUF2_RHIME (SWALL:P56913) (421 aa) fasta scores: E(): 6.5e-64, 44.19% id in 405 aa; NAD-dependent formate dehydrogenase subunit beta 3045525..3047090 Burkholderia pseudomallei K96243 3091562 YP_109126.1 CDS fdsA NC_006350.1 3047105 3050059 D Similar to Rhizobium meliloti NAD-dependent formate dehydrogenase alpha subunit FdsA SWALL:Q9EZD3 (EMBL:AF298190) (959 aa) fasta scores: E(): 0, 71.47% id in 936 aa and to Alcaligenes eutrophus NAD-dependent formate dehydrogenase alpha subunit FdsA SWALL:O87815 (EMBL:AJ223295) (959 aa) fasta scores: E(): 0, 75.7% id in 955 aa; NAD-dependent formate dehydrogenase subunit alpha 3047105..3050059 Burkholderia pseudomallei K96243 3092111 YP_109127.1 CDS fdsD NC_006350.1 3050067 3050327 D Weakly similar to Rhizobium loti NAD-dependent formate dehydrogenase delta subunit mll5393 SWALL:Q98BX1 (EMBL:AP003006) (102 aa) fasta scores: E(): 6e-07, 44.7% id in 85 aa; NAD-dependent formate dehydrogenase subunit delta 3050067..3050327 Burkholderia pseudomallei K96243 3091499 YP_109128.1 CDS BPSL2532 NC_006350.1 3050669 3052336 R Similar to many oxygenases including: Streptomyces argillaceus oxygenase MtmOII SWALL:O86481 (EMBL:AJ007932) (531 aa) fasta scores: E(): 3.8e-43, 37.09% id in 558 aa and Flavobacterium sp. PcpB pcpB SWALL:Q53961 (EMBL:U60175) (538 aa) fasta scores: E(): 7.1e-40, 32.86% id in 563 aa, and to Flavobacterium sp. PcpB pcpB SWALL:AAF15368 (EMBL:U12290) (538 aa) fasta scores: E(): 1.5e-38, 32.78% id in 549 aa; oxygenase complement(3050669..3052336) Burkholderia pseudomallei K96243 3093219 YP_109129.1 CDS BPSL2533 NC_006350.1 3053003 3054313 D Similar to many including: Rattus norvegicus UDP-N-acetylglucosamine--peptide n-acetylglucosaminyltransferase 110 kDa subunit OGT SWALL:OGT1_RAT (SWALL:P56558) (1036 aa) fasta scores: E(): 2.3e-21, 31.09% id in 402 aa, and to Ralstonia solanacearum probable TPR domain protein rsc3163 or rs00435 SWALL:Q8XUM4 (EMBL:AL646074) (700 aa) fasta scores: E(): 1.9e-21, 34.89% id in 341 aa. Note the product of this CDS contains multiple TPR repeats: Pfam PF00515; hypothetical protein 3053003..3054313 Burkholderia pseudomallei K96243 3093173 YP_109130.1 CDS citA NC_006350.1 3054702 3055997 R Similar to several membrane transport proteins including: Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 2.5e-99, 62.16% id in 415 aa, and to Ralstonia solanacearum probable sugar transporter transmembrane protein rsc3059 or rs06072 SWALL:Q8XUX4 (EMBL:AL646073) (431 aa) fasta scores: E(): 6.4e-117, 71.92% id in 431 aa; citrate-proton symporter complement(3054702..3055997) Burkholderia pseudomallei K96243 3092760 YP_109131.1 CDS BPSL2535 NC_006350.1 3056494 3057558 R Weakly similar to Thermoanaerobacter tengcongensis predicted glutamine amidotransferases tte2700 SWALL:Q8R6T5 (EMBL:AE013209) (245 aa) fasta scores: E(): 2.2e-13, 40.44% id in 178 aa, and to Clostridium acetobutylicum predicted glutamine amidotransferase cac1764 SWALL:Q97I88 (EMBL:AE007685) (241 aa) fasta scores: E(): 4.2e-13, 38.62% id in 189 aa; transferase complement(3056494..3057558) Burkholderia pseudomallei K96243 3093174 YP_109132.1 CDS BPSL2536 NC_006350.1 3058425 3059801 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3058425..3059801 Burkholderia pseudomallei K96243 3094608 YP_109133.1 CDS dsbB NC_006350.1 3059910 3060419 D disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3059910..3060419 Burkholderia pseudomallei K96243 3093150 YP_109134.1 CDS BPSL2538 NC_006350.1 3060961 3061983 D Weakly similar to several including: Caulobacter crescentus chaperone XdhC, cc2617 SWALL:Q9A547 (EMBL:AE005929) (338 aa) fasta scores: E(): 3.2e-35, 40.06% id in 332 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1522 SWALL:Q9I3J1 (EMBL:AE004580) (279 aa) fasta scores: E(): 9.1e-27, 40.24% id in 323 aa; hypothetical protein 3060961..3061983 Burkholderia pseudomallei K96243 3094609 YP_109135.1 CDS add NC_006350.1 3062025 3063050 D catalyzes the formation of inosine from adenosine; adenosine deaminase 3062025..3063050 Burkholderia pseudomallei K96243 3094048 YP_109136.1 CDS BPSL2540 NC_006350.1 3063112 3064524 D Similar to several membrane proteins including: Rhizobium meliloti integral membrane transporter ra0943 or sma1717 SWALL:Q92YE1 (EMBL:AE007280) (475 aa) fasta scores: E(): 7.7e-107, 61.02% id in 449 aa, and to Xanthomonas axonopodis xanthine/uracil permease yieg or xac0309 SWALL:AAM35201 (EMBL:AE011656) (437 aa) fasta scores: E(): 5.1e-55, 39.9% id in 446 aa; hypothetical protein 3063112..3064524 Burkholderia pseudomallei K96243 3093934 YP_109137.1 CDS guaD NC_006350.1 3064550 3065860 D Catalyzes the deamination of guanine; guanine deaminase 3064550..3065860 Burkholderia pseudomallei K96243 3092042 YP_109138.1 CDS BPSL2542 NC_006350.1 3066348 3066920 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2100 or rs01504 SWALL:Q8XXL3 (EMBL:AL646068) (204 aa) fasta scores: E(): 1.6e-44, 63.83% id in 188 aa and to Pseudomonas aeruginosa hypothetical protein Pa4629 SWALL:Q9HVG2 (EMBL:AE004877) (192 aa) fasta scores: E(): 1.1e-34, 55.13% id in 185 aa; hypothetical protein 3066348..3066920 Burkholderia pseudomallei K96243 3093935 YP_109139.1 CDS BPSL2543 NC_006350.1 3067254 3067967 R Similar to Ralstonia solanacearum probable lipoprotein rsc2124 or rs01480 SWALL:Q8XXI9 (EMBL:AL646068) (213 aa) fasta scores: E(): 2.4e-25, 46.26% id in 214 aa, and to Zymomonas mobilis hypothetical 23.9 kDa protein SWALL:Q9EZA0 (EMBL:AF300471) (220 aa) fasta scores: E(): 0.12, 25.48% id in 208 aa; lipoprotein complement(3067254..3067967) Burkholderia pseudomallei K96243 3094775 YP_109140.1 CDS pepN NC_006350.1 3068188 3070890 D Similar to Ralstonia solanacearum probable aminopeptidase N PepN or rsc2125 or rs01479 SWALL:Q8XXI8 (EMBL:AL646068) (905 aa) fasta scores: E(): 1.1e-170, 66.11% id in 906 aa and to Escherichia coli aminopeptidase N PepN or b0932 SWALL:AMPN_ECOLI (SWALL:P04825) (869 aa) fasta scores: E(): 9.5e-101, 48.6% id in 897 aa; aminopeptidase 3068188..3070890 Burkholderia pseudomallei K96243 3094776 YP_109141.1 CDS metE NC_006350.1 3071238 3073532 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(3071238..3073532) Burkholderia pseudomallei K96243 3092004 YP_109142.1 CDS metR NC_006350.1 3073649 3074581 D Similar to Haemophilus influenzae transcriptional activator protein MetR or hi1739 SWALL:METR_HAEIN (SWALL:P45349) (309 aa) fasta scores: E(): 1.7e-64, 56.72% id in 305 aa, and to Pasteurella multocida metr metr or pm0421 SWALL:Q9CNK8 (EMBL:AE006078) (308 aa) fasta scores: E(): 1.9e-65, 56.39% id in 305 aa; transcriptional activator protein 3073649..3074581 Burkholderia pseudomallei K96243 3091761 YP_109143.1 CDS fbp NC_006350.1 3074711 3075727 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 3074711..3075727 Burkholderia pseudomallei K96243 3092110 YP_109144.1 CDS BPSL2547A NC_006350.1 3076324 3076584 D Doubtful CDS. No significant database matches; hypothetical protein 3076324..3076584 Burkholderia pseudomallei K96243 3094091 YP_109145.1 CDS BPSL2548 NC_006350.1 3076607 3077083 D Doubtful CDS. No significant database matches; hypothetical protein 3076607..3077083 Burkholderia pseudomallei K96243 3094092 YP_109146.1 CDS BPSL2549 NC_006350.1 3077252 3077500 D hypothetical protein 3077252..3077500 Burkholderia pseudomallei K96243 3094250 YP_109147.1 CDS BPSL2550 NC_006350.1 3078156 3078503 D Similar in the C-terminus to: Rhizobium loti transglycosylase associated gene msl3293 SWALL:Q98GJ9 (EMBL:AP003001) (84 aa) fasta scores: E(): 7.3e-13, 62.02% id in 79 aa and Brucella melitensis hypothetical protein Bmei0216 SWALL:Q8YJ70 (EMBL:AE009464) (84 aa) fasta scores: E(): 2.9e-12, 55.69% id in 79 aa; hypothetical protein 3078156..3078503 Burkholderia pseudomallei K96243 3094251 YP_109148.1 CDS BPSL2551 NC_006350.1 3078790 3079287 R Similar to Ralstonia solanacearum probable signal peptide protein rsp1269 or rs05314 SWALL:Q8XQF8 (EMBL:AL646083) (167 aa) fasta scores: E(): 1.9e-21, 51.22% id in 164 aa; hypothetical protein complement(3078790..3079287) Burkholderia pseudomallei K96243 3092444 YP_109149.1 CDS BPSL2552 NC_006350.1 3079284 3080555 R Similar to Ralstonia solanacearum signal peptide protein rsp1270 or rs05315 SWALL:Q8XQF7 (EMBL:AL646083) (417 aa) fasta scores: E(): 1.8e-93, 62.75% id in 392 aa; lipoprotein complement(3079284..3080555) Burkholderia pseudomallei K96243 3092445 YP_109150.1 CDS BPSL2553 NC_006350.1 3080543 3082879 R Similar to Pseudomonas aeruginosa fe(III)-pyochelin receptor precursor FptA or pa4221 SWALL:FPTA_PSEAE (SWALL:P42512) (720 aa) fasta scores: E(): 2.5e-07, 25.62% id in 558 aa, and to Ralstonia solanacearum ferrisiderophore receptor protein rsp1271 or rs05316 SWALL:Q8XQF6 (EMBL:AL646083) (779 aa) fasta scores: E(): 1.2e-172, 59.42% id in 769 aa; siderophore receptor protein complement(3080543..3082879) Burkholderia pseudomallei K96243 3092253 YP_109151.1 CDS BPSL2554 NC_006350.1 3083026 3083502 R Similar to Ralstonia solanacearum probable transmembrane protein rsp1272 or rs05317 SWALL:Q8XQF5 (EMBL:AL646083) (155 aa) fasta scores: E(): 1.2e-14, 45.63% id in 149 aa; hypothetical protein complement(3083026..3083502) Burkholderia pseudomallei K96243 3092254 YP_109152.1 CDS BPSL2555 NC_006350.1 3084028 3084621 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 3084028..3084621 Burkholderia pseudomallei K96243 3092729 YP_109153.1 CDS BPSL2556 NC_006350.1 3084928 3086073 R Similar to Bacillus halodurans DNA polymerase III PolC-type PolC or bh2418 SWALL:DPO3_BACHD (SWALL:Q9KA72) (1433 aa) fasta scores: E(): 1.1e-12, 35.54% id in 166 aa, and to Neisseria meningitidis DNA polymerase III, epsilon subunit nmb1451 SWALL:Q9JYS6 (EMBL:AE002495) (470 aa) fasta scores: E(): 2.2e-27, 42.35% id in 229 aa, and to Bacillus subtilis probable ATP-dependent helicase DinG homolog dinG SWALL:DING_BACSU (SWALL:P54394) (931 aa) fasta scores: E(): 7.6e-14, 38.79% id in 183 aa; DNA polymerase/helicase complement(3084928..3086073) Burkholderia pseudomallei K96243 3092730 YP_109154.1 CDS cspA NC_006350.1 3086219 3086422 R Similar to Bordetella pertussis cold shock-like protein CspA SWALL:CSPA_BORPE (SWALL:Q9Z5R4) (67 aa) fasta scores: E(): 1.1e-16, 67.16% id in 67 aa, and to Burkholderia multivorans cold-shock protein CspD SWALL:Q8RL32 (EMBL:AY089707) (68 aa) fasta scores: E(): 4.3e-25, 95.45% id in 66 aa; cold shock-like protein complement(3086219..3086422) Burkholderia pseudomallei K96243 3094214 YP_109155.1 CDS BPSL2558 NC_006350.1 3086825 3087088 D Doubtful CDS. No significant database matches; hypothetical protein 3086825..3087088 Burkholderia pseudomallei K96243 3092647 YP_109156.1 CDS BPSL2559 NC_006350.1 3087604 3088743 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.5e-21, 34.94% id in 415 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 7e-58, 45.54% id in 393 aa; outer membrane porin 3087604..3088743 Burkholderia pseudomallei K96243 3092648 YP_109157.1 CDS greB NC_006350.1 3088971 3089534 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(3088971..3089534) Burkholderia pseudomallei K96243 3094279 YP_109158.1 CDS spoT NC_006350.1 3090073 3092442 R Similar to Escherichia coli, and Escherichia coli O157:H7 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) SpoT or b3650 or z5076 or ecs4525 SWALL:SPOT_ECOLI (SWALL:P17580) (702 aa) fasta scores: E(): 6.7e-107, 45.63% id in 710 aa, and to Neisseria meningitidis guanosine-3',5'-bis SpoT or nma1917 SWALL:Q9JT97 (EMBL:AL162757) (725 aa) fasta scores: E(): 1.9e-118, 43.77% id in 731 aa; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase complement(3090073..3092442) Burkholderia pseudomallei K96243 3093604 YP_109159.1 CDS rpoZ NC_006350.1 3092509 3092712 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(3092509..3092712) Burkholderia pseudomallei K96243 3092978 YP_109160.1 CDS gmk NC_006350.1 3092773 3093456 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(3092773..3093456) Burkholderia pseudomallei K96243 3092895 YP_109161.1 CDS BPSL2564 NC_006350.1 3093463 3094386 R Similar to many proteins of undefined function including: Ralstonia solanacearum hypothetical protein rsc2156 or rs01446 SWALL:Q8XXF8 (EMBL:AL646068) (311 aa) fasta scores: E(): 4.6e-64, 64.42% id in 312 aa, and to Haemophilus influenzae protein Hi0467 SWALL:YICC_HAEIN (SWALL:P44726) (287 aa) fasta scores: E(): 6.6e-13, 33.22% id in 307 aa; hypothetical protein complement(3093463..3094386) Burkholderia pseudomallei K96243 3092715 YP_109162.1 CDS rph NC_006350.1 3094558 3095289 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3094558..3095289 Burkholderia pseudomallei K96243 3094131 YP_109163.1 CDS BPSL2566 NC_006350.1 3095292 3095918 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3095292..3095918 Burkholderia pseudomallei K96243 3092716 YP_109164.1 CDS BPSL2567 NC_006350.1 3095915 3097132 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3095915..3097132 Burkholderia pseudomallei K96243 3092267 YP_109165.1 CDS BPSL2568 NC_006350.1 3097526 3098041 D Weakly similar to Salmonella typhimurium LT2 gifsy-2 prophage lysozyme stm1028 SWALL:Q8ZQ99 (EMBL:AE008743) (150 aa) fasta scores: E(): 0.0078, 30.18% id in 159 aa; hypothetical protein 3097526..3098041 Burkholderia pseudomallei K96243 3092268 YP_109166.1 CDS BPSL2569 NC_006350.1 3098038 3098463 D hypothetical protein 3098038..3098463 Burkholderia pseudomallei K96243 3094373 YP_109167.1 CDS BPSL2570 NC_006350.1 3098811 3099368 R hypothetical protein complement(3098811..3099368) Burkholderia pseudomallei K96243 3094374 YP_109168.1 CDS BPSL2571 NC_006350.1 3099365 3099673 R Doubtful CDS. No significant database matches; hypothetical protein complement(3099365..3099673) Burkholderia pseudomallei K96243 3092614 YP_109169.1 CDS BPSL2572 NC_006350.1 3099670 3099987 R hypothetical protein complement(3099670..3099987) Burkholderia pseudomallei K96243 3092615 YP_109170.1 CDS BPSL2573 NC_006350.1 3099960 3100235 R hypothetical protein complement(3099960..3100235) Burkholderia pseudomallei K96243 3092577 YP_109171.1 CDS BPSL2574 NC_006350.1 3100232 3100567 R hypothetical protein complement(3100232..3100567) Burkholderia pseudomallei K96243 3092578 YP_109172.1 CDS BPSL2575 NC_006350.1 3100568 3101269 R hypothetical protein complement(3100568..3101269) Burkholderia pseudomallei K96243 3092230 YP_109173.1 CDS BPSL2576 NC_006350.1 3101269 3101904 R hypothetical protein complement(3101269..3101904) Burkholderia pseudomallei K96243 3092231 YP_109174.1 CDS BPSL2577 NC_006350.1 3101933 3102235 R hypothetical protein complement(3101933..3102235) Burkholderia pseudomallei K96243 3092069 YP_109175.1 CDS BPSL2578 NC_006350.1 3102329 3102535 R C-terminus is similar to the C-terminal region of Rhizobium loti hypothetical protein Msr8070 SWALL:Q984B8 (EMBL:AP003013) (87 aa) fasta scores: E(): 8.7, 34.88% id in 43 aa; hypothetical protein complement(3102329..3102535) Burkholderia pseudomallei K96243 3092070 YP_109176.1 CDS BPSL2579 NC_006350.1 3102532 3103590 R Weakly similar to Lactococcus delbrueckii bacteriophage LL-H DnaA analog SWALL:Q8SDH3 (EMBL:L46883) (299 aa) fasta scores: E(): 9.6e-05, 24.9% id in 261 aa, and to Bacteriophage phi ETA orf22 SWALL:Q9G023 (EMBL:AP001553) (256 aa) fasta scores: E(): 0.00017, 22.77% id in 202 aa; hypothetical protein complement(3102532..3103590) Burkholderia pseudomallei K96243 3092057 YP_109177.1 CDS BPSL2580 NC_006350.1 3103587 3103862 R Doubtful CDS. No significant database matches; hypothetical protein complement(3103587..3103862) Burkholderia pseudomallei K96243 3092058 YP_109178.1 CDS BPSL2581 NC_006350.1 3103855 3104205 R Doubtful CDS. No significant database matches; hypothetical protein complement(3103855..3104205) Burkholderia pseudomallei K96243 3091657 YP_109179.1 CDS BPSL2582 NC_006350.1 3104211 3104420 R Similar to Escherichia coli O157:H7 DNA binding protein z3946 or ecs3513 SWALL:Q8X969 (EMBL:AE005493) (68 aa) fasta scores: E(): 0.058, 29.5% id in 61 aa, and to Escherichia coli prophage cp4-57 regulatory protein alpa or alp or b2624 SWALL:ALPA_ECOLI (SWALL:P33997) (70 aa) fasta scores: E(): 0.28, 35.59% id in 59 aa; hypothetical protein complement(3104211..3104420) Burkholderia pseudomallei K96243 3091658 YP_109180.1 CDS BPSL2583 NC_006350.1 3104506 3105051 R hypothetical protein complement(3104506..3105051) Burkholderia pseudomallei K96243 3091826 YP_109181.1 CDS BPSL2584 NC_006350.1 3105139 3105351 R hypothetical protein complement(3105139..3105351) Burkholderia pseudomallei K96243 3091827 YP_109182.1 CDS BPSL2585 NC_006350.1 3105344 3105631 R hypothetical protein complement(3105344..3105631) Burkholderia pseudomallei K96243 3092534 YP_109183.1 CDS BPSL2586 NC_006350.1 3105703 3106971 R Similar to Ralstonia solanacearum integrase prophage protein rsc1896 or rs03460 SWALL:Q8XY67 (EMBL:AL646067) (411 aa) fasta scores: E(): 6.6e-91, 56.55% id in 412 aa, and to Agrobacterium tumefaciens phage-related integrase int or atu3831 or agr_l_2007 SWALL:Q8U997 (EMBL:AE009314) (396 aa) fasta scores: E(): 2.5e-74, 52.4% id in 395 aa; phage integrase complement(3105703..3106971) Burkholderia pseudomallei K96243 3092535 YP_109184.1 CDS BPSL2588 NC_006350.1 3108136 3108714 R Doubtful CDS. No significant database matches; hypothetical protein complement(3108136..3108714) Burkholderia pseudomallei K96243 3094562 YP_109185.1 CDS BPSL2589 NC_006350.1 3108888 3109382 D lipoprotein 3108888..3109382 Burkholderia pseudomallei K96243 3091774 YP_109186.1 CDS BPSL2590 NC_006350.1 3109801 3111114 D Similar to many MFS-family membrane transport proteins including: Escherichia coli shikimate transporter ShiA or b1981 SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 2.2e-46, 36.36% id in 440 aa, Ralstonia solanacearum metabolite transport transmembrane protein rsc2856 or rs00249 SWALL:Q8XVH5 (EMBL:AL646072) (439 aa) fasta scores: E(): 9.7e-135, 85.84% id in 438 aa and Pseudomonas aeruginosa probable MFS transporter pa3749 SWALL:Q9HXP5 (EMBL:AE004794) (437 aa) fasta scores: E(): 8.6e-119, 76.83% id in 436 aa; membrane transporter 3109801..3111114 Burkholderia pseudomallei K96243 3091775 YP_109187.1 CDS BPSL2591 NC_006350.1 3111295 3111477 D hypothetical protein 3111295..3111477 Burkholderia pseudomallei K96243 3091991 YP_109188.1 CDS waaC2 NC_006350.1 3111512 3112534 R Similar to many proteins involved in LPS core biosynthesis: Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 9.2e-29, 36.54% id in 301 aa, Ralstonia solanacearum probable lipopolysaccharide heptosyltransferase RfaC2 or rsp0634 or rs03733 SWALL:Q8XS47 (EMBL:AL646079) (332 aa) fasta scores: E(): 1.5e-85, 69.41% id in 327 aa and to Burkholderia cepacia heptosyltransferase I WaaC SWALL:Q937V3 (EMBL:AJ302064) (331 aa) fasta scores: E(): 1.3e-31, 37% id in 327 aa; lipopolysaccharide heptosyltransferase-1 complement(3111512..3112534) Burkholderia pseudomallei K96243 3093376 YP_109189.1 CDS BPSL2593 NC_006350.1 3112696 3114357 D Similar to Salmonella typhi voltage-gated Clc-type chloride channel EriC or sty0225 SWALL:ERIC_SALTI (SWALL:Q8Z9B3) (473 aa) fasta scores: E(): 3.1e-19, 29.93% id in 471 aa, and to Burkholderia cepacia chloride-channel protein SWALL:Q93L19 (EMBL:AF029344) (443 aa) fasta scores: E(): 5e-51, 44.86% id in 428 aa, and to Xanthomonas campestris chloride channel yadq or xcc2655 SWALL:AAM41927 (EMBL:AE012377) (454 aa) fasta scores: E(): 3.3e-48, 41.44% id in 444 aa; chloride-channel protein 3112696..3114357 Burkholderia pseudomallei K96243 3091992 YP_109190.1 CDS BPSL2594 NC_006350.1 3114474 3114893 R hypothetical protein complement(3114474..3114893) Burkholderia pseudomallei K96243 3092560 YP_109191.1 CDS minE NC_006350.1 3115015 3115269 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(3115015..3115269) Burkholderia pseudomallei K96243 3093063 YP_109192.1 CDS minD NC_006350.1 3115282 3116097 R Similar to Escherichia coli, and Escherichia coli O157:H7 septum site-determining protein MinD or b1175 or z1937 or ecs1669 SWALL:MIND_ECOLI (SWALL:P18197) (269 aa) fasta scores: E(): 1.6e-74, 74.34% id in 269 aa and to Ralstonia solanacearum probable septum site-determining protein MinD or rsc3365 or rs02640 SWALL:Q8XU29 (EMBL:AL646075) (271 aa) fasta scores: E(): 5e-87, 84.5% id in 271 aa; septum site-determining protein complement(3115282..3116097) Burkholderia pseudomallei K96243 3093025 YP_109193.1 CDS minC NC_006350.1 3116156 3116968 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(3116156..3116968) Burkholderia pseudomallei K96243 3093128 YP_109194.1 CDS BPSL2598 NC_006350.1 3117122 3117694 R acetyltransferase complement(3117122..3117694) Burkholderia pseudomallei K96243 3092561 YP_109195.1 CDS BPSL2599 NC_006350.1 3118611 3118883 D hypothetical protein 3118611..3118883 Burkholderia pseudomallei K96243 3093414 YP_109196.1 CDS serS NC_006350.1 3119313 3120614 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(3119313..3120614) Burkholderia pseudomallei K96243 3094242 YP_109197.1 CDS BPSL2601 NC_006350.1 3120727 3121038 D hypothetical protein 3120727..3121038 Burkholderia pseudomallei K96243 3093415 YP_109198.1 CDS BPSL2602 NC_006350.1 3121078 3122445 R Similar to many proteins of undefined function including: Ralstonia solanacearum hypothetical protein rsc2338 or rs01208 SWALL:Q8XWY2 (EMBL:AL646069) blast scores: E(): e-171, score: 1537 72% id, and to Neisseria meningitidis hypothetical protein Nma1433 SWALL:Q9JU96 (EMBL:AL162755) blast scores: E(): e-170, score: 1529 68% id; recombination factor protein RarA complement(3121078..3122445) Burkholderia pseudomallei K96243 3092564 YP_109199.1 CDS lolA NC_006350.1 3122575 3123291 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(3122575..3123291) Burkholderia pseudomallei K96243 3092565 YP_109200.1 CDS BPSL2604 NC_006350.1 3123349 3125817 R Similar to many involved in cell-division or sporulation: Coxiella burnetii cell division protein FtsK homolog or spoIIIE SWALL:FTSK_COXBU (SWALL:P39920) (778 aa) fasta scores: E(): 5.2e-130, 50.06% id in 765 aa, and to Ralstonia solanacearum probable cell division FtsK transmembrane protein or rsc2341 or rs01205 SWALL:Q8XWX9 (EMBL:AL646069) (781 aa) fasta scores: E(): 4.3e-202, 71.02% id in 780 aa; cell division protein complement(3123349..3125817) Burkholderia pseudomallei K96243 3091542 YP_109201.1 CDS trxB NC_006350.1 3125983 3126945 D Similar to Escherichia coli, and Escherichia coli O157:H7 thioredoxin reductase TrxB or b0888 or z1232 or ecs0973 SWALL:TRXB_ECOLI (SWALL:P09625) (320 aa) fasta scores: E(): 4.2e-82, 67.39% id in 319 aa, and to Vibrio cholerae thioredoxin reductase TrxB or vc1182 SWALL:TRXB_VIBCH (SWALL:Q9KSS4) (318 aa) fasta scores: E(): 4.3e-85, 69.52% id in 315 aa; thioredoxin reductase 3125983..3126945 Burkholderia pseudomallei K96243 3092744 YP_109202.1 CDS BPSL2606 NC_006350.1 3127111 3127848 D Similar in parts to severalm proteins of undefined function including: Ralstonia solanacearum hypothetical protein rsc2343 or rs01203 SWALL:Q8XWX7 (EMBL:AL646069) (221 aa) fasta scores: E(): 1.9e-34, 56.94% id in 216 aa and Xanthomonas campestris hypothetical protein Xcc1705 SWALL:AAM40999 (EMBL:AE012272) (181 aa) fasta scores: E(): 3.1e-10, 36.84% id in 171 aa; hypothetical protein 3127111..3127848 Burkholderia pseudomallei K96243 3091543 YP_109203.1 CDS BPSL2607 NC_006350.1 3127874 3128494 D Similar to many membrane proteins including Salmonella typhimurium inner membrane protein Yigc or stm3978 or stm3738 SWALL:Q8ZL43 (EMBL:AE008873) (205 aa) fasta scores: E(): 3.5e-20, 37.18% id in 199 aa and to Ralstonia solanacearum probable transmembrane protein rsc2344 or rs01202 SWALL:Q8XWX6 (EMBL:AL646069) (207 aa) fasta scores: E(): 1.3e-42, 53.88% id in 206 aa; hypothetical protein 3127874..3128494 Burkholderia pseudomallei K96243 3092682 YP_109204.1 CDS BPSL2608 NC_006350.1 3128727 3129845 R Similar to Rhizobium loti ATP-binding component of ABC sugar transporter mlr3054 SWALL:Q98H30 (EMBL:AP003001) (371 aa) fasta scores: E(): 4.4e-70, 55.49% id in 373 aa and to Rhizobium loti ABC transporter ATP-binding component mlr6654 SWALL:Q988P3 (EMBL:AP003009) (366 aa) fasta scores: E(): 2.8e-69, 56.95% id in 374 aa. See BPSL261 as a possible indictation as to the substrate of this transport system.; ABC transporter ATP-binding protein complement(3128727..3129845) Burkholderia pseudomallei K96243 3092683 YP_109205.1 CDS BPSL2609 NC_006350.1 3129946 3130803 R Similar to many ABC-transport proteins including: Brucella melitensis sugar transport system permease bmeii0592 SWALL:Q8YCE0 (EMBL:AE009695) (293 aa) fasta scores: E(): 8.9e-75, 64.15% id in 279 aa, and to Rhizobium loti ABC transporter permease mlr6653 SWALL:Q988P4 (EMBL:AP003009) (292 aa) fasta scores: E(): 4.5e-70, 59.14% id in 279 aa. See BPSL261 as a possible indictation as to the substrate of this transport system.; ABC transporter membrane permease complement(3129946..3130803) Burkholderia pseudomallei K96243 3092594 YP_109206.1 CDS BPSL2610 NC_006350.1 3130793 3131731 R Similar to Pseudomonas aeruginosa probable permease of ABC sugar transporter Pa3189 SWALL:Q9HZ49 (EMBL:AE004742) (310 aa) fasta scores: E(): 4e-77, 60.92% id in 302 aa, and to Rhizobium meliloti transport system permease ABC transporter protein r03300 or smc04395 SWALL:Q92KZ8 (EMBL:AL591793) (292 aa) fasta scores: E(): 6e-73, 60.49% id in 281 aa. See BPSL261 as a possible indictation as to the substrate of this transport system.; ABC transporter membrane permease complement(3130793..3131731) Burkholderia pseudomallei K96243 3092595 YP_109207.1 CDS malE NC_006350.1 3131888 3133135 R Highly similar to Burkholderia pseudomallei maltose-binding protein MalE SWALL:Q9F7V0 (EMBL:AF274304) (416 aa) fasta scores: E(): 5.6e-161, 99.76% id in 416 aa. Also similar to many other ABC transporter solute-binding proteins e.g. Rhizobium loti ABC transporter substrate-binding protein mlr6651 SWALL:Q988P6 (EMBL:AP003009) (419 aa) fasta scores: E(): 2.3e-59, 41.7% id in 398 aa; maltose-binding protein complement(3131888..3133135) Burkholderia pseudomallei K96243 3093125 YP_109208.1 CDS zwf NC_006350.1 3133594 3135063 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3133594..3135063 Burkholderia pseudomallei K96243 3094730 YP_109209.1 CDS pgl NC_006350.1 3135151 3135831 D Similar to Pseudomonas aeruginosa 6-phosphogluconolactonase Pgl or DevB or pa3182 SWALL:6PGL_PSEAE (SWALL:Q9X2N2) (238 aa) fasta scores: E(): 4e-21, 41.66% id in 216 aa, and to Rhizobium meliloti 6-phosphogluconolactonase Pgl or DevB or r00703 or smc03069 SWALL:6PGL_RHIME (SWALL:Q9Z3S1) (232 aa) fasta scores: E(): 5e-25, 40.96% id in 227 aa; 6-phosphogluconolactonase 3135151..3135831 Burkholderia pseudomallei K96243 3094109 YP_109210.1 CDS glk NC_006350.1 3135809 3137734 D glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; bifunctional glucokinase/RpiR family transcriptional regulator 3135809..3137734 Burkholderia pseudomallei K96243 3091975 YP_109211.1 CDS BPSL2615 NC_006350.1 3138237 3139037 D Similar to many membrane transport proteins including: Escherichia coli cystine-binding periplasmic protein precursor FliY or b1920 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 4.2e-31, 40.23% id in 251 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa0314 SWALL:Q9I6H7 (EMBL:AE004469) (256 aa) fasta scores: E(): 1e-47, 53.22% id in 248 aa, and to Deinococcus radiodurans amino acid ABC transporter periplasmic amino acid-binding protein dr0564 SWALL:Q9RWV1 (EMBL:AE001914) (261 aa) fasta scores: E(): 1.5e-39, 47.69% id in 260 aa; ABC transporter substrate binding component 3138237..3139037 Burkholderia pseudomallei K96243 3093954 YP_109212.1 CDS BPSL2616 NC_006350.1 3139123 3139782 D Similar to Salmonella typhimurium, and Salmonella typhi ABC-type amino acid transporter permease component YecS or stm1952 or sty2160 SWALL:Q8XET2 (EMBL:AE008786) (222 aa) fasta scores: E(): 3.7e-34, 45.49% id in 211 aa, and to Caulobacter crescentus cystine ABC tranporter, permease, cc1440 SWALL:Q9A8B4 (EMBL:AE005818) (219 aa) fasta scores: E(): 6.6e-34, 48.81% id in 211 aa; amino acid ABC transporter permease 3139123..3139782 Burkholderia pseudomallei K96243 3093955 YP_109213.1 CDS BPSL2617 NC_006350.1 3139829 3140554 D Similar to Escherichia coli, and Escherichia coli O157:H7 glutamate/aspartate transport ATP-binding protein GltL or b0652 or z0802 or ecs0691 SWALL:GLTL_ECOLI (SWALL:P41076) (241 aa) fasta scores: E(): 8.5e-62, 75.93% id in 241 aa, and to Salmonella typhimurium, and Salmonella typhi ABC superfamily GltL or stm0662 or sty0707 SWALL:Q8XG42 (EMBL:AE008726) (241 aa) fasta scores: E(): 5.8e-62, 76.34% id in 241 aa; amino acid ABC transporter ATP-binding protein 3139829..3140554 Burkholderia pseudomallei K96243 3094121 YP_109214.1 CDS BPSL2618 NC_006350.1 3140625 3141644 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 3140625..3141644 Burkholderia pseudomallei K96243 3094122 YP_109215.1 CDS BPSL2619 NC_006350.1 3141641 3142108 D Weakly similar to Xanthomonas axonopodis hypothetical protein Xac4063 SWALL:Q8PFC0 (EMBL:AE012054) (154 aa) fasta scores: E(): 9.1e-10, 40.29% id in 134 aa; hypothetical protein 3141641..3142108 Burkholderia pseudomallei K96243 3093938 YP_109216.1 CDS BPSL2620 NC_006350.1 3142218 3143453 R Similar to Salmonella typhimurium MFS family multidrug transport protein, bicyclomycin resistance protein Bcr or stm2221 SWALL:Q8ZNJ7 (EMBL:AE008799) (396 aa) fasta scores: E(): 6.2e-44, 34.5% id in 397 aa and to Escherichia coli bicyclomycin resistance protein Bcr or bica or bicr or sur or suxa or b2182 SWALL:BCR_ECOLI (SWALL:P28246) (396 aa) fasta scores: E(): 2e-43, 33.93% id in 386 aa; major facilitator transporter complement(3142218..3143453) Burkholderia pseudomallei K96243 3093939 YP_109217.1 CDS BPSL2621 NC_006350.1 3143540 3144160 D hypothetical protein 3143540..3144160 Burkholderia pseudomallei K96243 3094773 YP_109218.1 CDS BPSL2622 NC_006350.1 3144260 3144718 D hypothetical protein 3144260..3144718 Burkholderia pseudomallei K96243 3094774 YP_109219.1 CDS hemL NC_006350.1 3145160 3146443 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3145160..3146443 Burkholderia pseudomallei K96243 3091548 YP_109220.1 CDS ribD NC_006350.1 3146472 3147608 D Similar to Haemophilus influenzae riboflavin biosynthesis protein ribd [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase ribd or ribg or hi0944 SWALL:RIBD_HAEIN (SWALL:P44326) (372 aa) fasta scores: E(): 4.5e-54, 47.73% id in 375 aa, and to Ralstonia solanacearum probable riboflavin biosynthesis bifunctional ribd : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6- ribd or rsc0715 or rs05138 SWALL:Q8Y1H5 (EMBL:AL646060) (370 aa) fasta scores: E(): 6.7e-94, 67.48% id in 369 aa; multifunctional riboflavin biosynthetic protein [deaminase, reductase 3146472..3147608 Burkholderia pseudomallei K96243 3092948 YP_109221.1 CDS ribE NC_006350.1 3147623 3148237 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3147623..3148237 Burkholderia pseudomallei K96243 3091866 YP_109222.1 CDS ribB NC_006350.1 3148701 3149837 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 3148701..3149837 Burkholderia pseudomallei K96243 3092773 YP_109223.1 CDS ribH NC_006350.1 3149917 3150438 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3149917..3150438 Burkholderia pseudomallei K96243 3091867 YP_109224.1 CDS nusB NC_006350.1 3150435 3150872 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3150435..3150872 Burkholderia pseudomallei K96243 3092073 YP_109225.1 CDS BPSL2629 NC_006350.1 3150880 3152130 D Similar to many aminotransferases including: Ralstonia solanacearum aminotransferase rsc0710 or rs05143 SWALL:Q8Y1I0 (EMBL:AL646060) (394 aa) fasta scores: E(): 3.3e-108, 73.52% id in 389 aa and to Thermus thermophilus aspartate aminotransferase AspC SWALL:AAT_THETH (SWALL:Q56232) (385 aa) fasta scores: E(): 2.7e-36, 35.53% id in 394 aa; aminotransferase 3150880..3152130 Burkholderia pseudomallei K96243 3094017 YP_109226.1 CDS BPSL2630 NC_006350.1 3152745 3153812 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0709 or rs05144 SWALL:Q8Y1I1 (EMBL:AL646060) (362 aa) fasta scores: E(): 7.5e-43, 48.54% id in 344 aa; lipoprotein complement(3152745..3153812) Burkholderia pseudomallei K96243 3094018 YP_109227.1 CDS ubiD NC_006350.1 3154437 3155996 D highly similar to Neisseria meningitidis 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD or nmb1694 SWALL:UBID_NEIMB (SWALL:Q9JY86) (494 aa) fasta scores: E(): 7.1e-67, 72.65% id in 523 aa and to Salmonella typhimurium 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ubid or stm3978 or stmd1.11 SWALL:UBID_SALTY (SWALL:Q9L6M0) (492 aa) fasta scores: E(): 6.1e-64, 67.95% id in 518 aa; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3154437..3155996 Burkholderia pseudomallei K96243 3094696 YP_109228.1 CDS BPSL2632 NC_006350.1 3156037 3156711 D Weakly similar to Pseudomonas aeruginosa chemotactic transduction protein ChpE or pa0417 SWALL:CHPE_PSEAE (SWALL:O87005) (203 aa) fasta scores: E(): 6.2e-09, 28.57% id in 203 aa, and to Bacillus subtilis hypothetical protein YcgF SWALL:P94381 (EMBL:Z99105) (209 aa) fasta scores: E(): 2.4e-08, 25.72% id in 206 aa; hypothetical protein 3156037..3156711 Burkholderia pseudomallei K96243 3094460 YP_109229.1 CDS BPSL2633 NC_006350.1 3157166 3158149 R catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase complement(3157166..3158149) Burkholderia pseudomallei K96243 3094461 YP_109230.1 CDS BPSL2634 NC_006350.1 3158311 3158604 R Similar to the Bordetella pertussis virulence related protein of unknown function Vrg-6 SWALL:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 3.2e-07, 47.22% id in 108 aa. Also similar to and to Ralstonia solanacearum probable transmembrane protein rsc1969 or rs03543 SWALL:Q8XXZ4 (EMBL:AL646067) (106 aa) fasta scores: E(): 1.1e-11, 59.59% id in 99 aa. Note that the product of this CDS is rich in the amino acids Pro, Ala, Val , Tyr and Gly; hypothetical protein complement(3158311..3158604) Burkholderia pseudomallei K96243 3094201 YP_109231.1 CDS BPSL2635 NC_006350.1 3159029 3160165 D Weakly similar to Ralstonia solanacearum hypothetical protein rsp0668 or rs01781 SWALL:Q8XS13 (EMBL:AL646080) (294 aa) fasta scores: E(): 6.7e-34, 47.4% id in 289 aa and to Streptomyces coelicolor hypothetical protein sco3384 or sce126.02C SWALL:Q9X845 (EMBL:AL049630) (420 aa) fasta scores: E(): 9.1e-15, 31.34% id in 319 aa; hypothetical protein 3159029..3160165 Burkholderia pseudomallei K96243 3094202 YP_109232.1 CDS BPSL2636 NC_006350.1 3160248 3160811 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1385 or rs02073 SWALL:Q8XQA1 (EMBL:AL646084) (183 aa) fasta scores: E(): 9.1e-35, 51.12% id in 178 aa and to Vibrio cholerae hypothetical protein Vc0459 SWALL:Q9KUQ6 (EMBL:AE004132) (185 aa) fasta scores: E(): 3.6e-21, 39.87% id in 163 aa; hypothetical protein 3160248..3160811 Burkholderia pseudomallei K96243 3094511 YP_109233.1 CDS BPSL2637 NC_006350.1 3160835 3161191 R Similar to Aquifex aeolicus hypothetical protein Aq_450 SWALL:Y450_AQUAE (SWALL:O66758) (105 aa) fasta scores: E(): 3e-07, 33.75% id in 80 aa and to Chlorobium tepidum hypothetical protein Ct2101 SWALL:AAM73317 (EMBL:AE012959) (110 aa) fasta scores: E(): 3.4e-06, 37.2% id in 86 aa; hypothetical protein complement(3160835..3161191) Burkholderia pseudomallei K96243 3094512 YP_109234.1 CDS BPSL2638 NC_006350.1 3161215 3161601 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(3161215..3161601) Burkholderia pseudomallei K96243 3094255 YP_109235.1 CDS BPSL2639 NC_006350.1 3162211 3163431 D Similar to several including: Physarum polycephalum PhP protein Php SWALL:Q94704 (EMBL:X64708) (356 aa) fasta scores: E(): 4.7e-26, 37.32% id in 351 aa and to Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 1.3e-05, 27.86% id in 402 aa; hypothetical protein 3162211..3163431 Burkholderia pseudomallei K96243 3094256 YP_109236.1 CDS BPSL2640 NC_006350.1 3163699 3164427 R Similar to many including: Stigmatella aurantiaca methyl transferase SWALL:Q8RJZ2 (EMBL:AJ421825) (242 aa) fasta scores: E(): 1.9e-61, 61.57% id in 242 aa, Rhizobium loti hypothetical protein Mll3908 SWALL:Q98F67 (EMBL:AP003003) (242 aa) fasta scores: E(): 2.6e-60, 61.98% id in 242 aa and to Brucella melitensis ubiquinone/menaquinone biosynthesis methyltransferase UbiE bmei1834 SWALL:Q8YEP4 (EMBL:AE009616) (262 aa) fasta scores: E(): 4.7e-57, 60.41% id in 240 aa; hypothetical protein complement(3163699..3164427) Burkholderia pseudomallei K96243 3093518 YP_109237.1 CDS BPSL2641 NC_006350.1 3164671 3165921 R Weakly similar to many Prokaryotic and Eukaryotic proteins: Homo sapiens hypothetical protein flj20348 SWALL:Q9NXA8 (EMBL:AK000355) (299 aa) fasta scores: E(): 1.1e-09, 30% id in 190 aa, Pseudomonas aeruginosa probable cobalamin biosynthetic protein pa1125 SWALL:Q9I4L0 (EMBL:AE004542) (250 aa) fasta scores: E(): 3.2e-08, 31.83% id in 267 aa and to Leishmania major regulatory protein Sir2 homolog SWALL:SIR2_LEIMA (SWALL:Q25337) (381 aa) fasta scores: E(): 1.8e-07, 25.49% id in 302 aa; Sir2 family protein complement(3164671..3165921) Burkholderia pseudomallei K96243 3093519 YP_109238.1 CDS trmB NC_006350.1 3166316 3167113 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3166316..3167113 Burkholderia pseudomallei K96243 3093291 YP_109239.1 CDS uppP NC_006350.1 3167269 3168099 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(3167269..3168099) Burkholderia pseudomallei K96243 3093292 YP_109240.1 CDS BPSL2644 NC_006350.1 3168176 3168757 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0700 or rs01605 SWALL:Q8Y1J0 (EMBL:AL646060) (204 aa) fasta scores: E(): 1.3e-26, 46.39% id in 194 aa; hypothetical protein complement(3168176..3168757) Burkholderia pseudomallei K96243 3094465 YP_109241.1 CDS BPSL2645 NC_006350.1 3168754 3169065 R Similar to Xanthomonas axonopodis proteinase inhibitor xac0347 SWALL:AAM35239 (EMBL:AE011660) (86 aa) fasta scores: E(): 2e-18, 71.08% id in 83 aa, and to Escherichia coli hypothetical protein YeiW or b2170.1 SWALL:YEIW_ECOLI (SWALL:P58039) (84 aa) fasta scores: E(): 2.9e-17, 63.41% id in 82 aa; hypothetical protein complement(3168754..3169065) Burkholderia pseudomallei K96243 3094466 YP_109242.1 CDS hemN NC_006350.1 3169253 3170647 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3169253..3170647 Burkholderia pseudomallei K96243 3091549 YP_109243.1 CDS BPSL2647 NC_006350.1 3170681 3170986 D Doubtful CDS. No significant database matches; hypothetical protein 3170681..3170986 Burkholderia pseudomallei K96243 3092271 YP_109244.1 CDS pcm NC_006350.1 3171093 3171746 D Similar to Aeropyrum pernix protein-L-isoaspartate O-methyltransferase Pcm or ape1011 SWALL:PIMT_AERPE (SWALL:Q9YDA1) (256 aa) fasta scores: E(): 2e-20, 42.26% id in 194 aa and to Ralstonia solanacearum probable protein-L-isoaspartate O-methyltransferase Pcm or rsc0697 or rs01602 SWALL:Q8Y1J3 (EMBL:AL646060) (216 aa) fasta scores: E(): 3.1e-52, 65.43% id in 217 aa; protein-L-isoaspartate O-methyltransferase 3171093..3171746 Burkholderia pseudomallei K96243 3093624 YP_109245.1 CDS BPSL2649 NC_006350.1 3171761 3172084 D Similar to Ralstonia solanacearum hypothetical protein rsc0696 or rs01601 SWALL:Q8Y1J4 (EMBL:AL646060) (110 aa) fasta scores: E(): 1.6e-20, 53.63% id in 110 aa and to Neisseria meningitidis hypothetical protein Nma0573 SWALL:Q9JW28 (EMBL:AL162753) (107 aa) fasta scores: E(): 4.6e-14, 45.19% id in 104 aa; hypothetical protein 3171761..3172084 Burkholderia pseudomallei K96243 3092272 YP_109246.1 CDS BPSL2650 NC_006350.1 3172177 3173505 R catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; omega amino acid--pyruvate transaminase complement(3172177..3173505) Burkholderia pseudomallei K96243 3094317 YP_109247.1 CDS BPSL2651 NC_006350.1 3173859 3175166 D Similar to Ralstonia solanacearum urea/short-chain amide-binding signal peptide protein rsc2041 or rs03606 SWALL:Q8XXS2 (EMBL:AL646067) (418 aa) fasta scores: E(): 7.9e-133, 82.61% id in 420 aa and to Yersinia pestis substrate-binding periplasmic transport protein ypo1187 SWALL:Q8ZGU0 (EMBL:AJ414147) (422 aa) fasta scores: E(): 8.5e-121, 76.42% id in 420 aa; hypothetical protein 3173859..3175166 Burkholderia pseudomallei K96243 3094318 YP_109248.1 CDS BPSL2652 NC_006350.1 3175261 3176883 D Similar to Yersinia pestis branched-chain amino acid transport system, permease component ypo1188 SWALL:Q8ZGT9 (EMBL:AJ414147) (533 aa) fasta scores: E(): 1.3e-79, 50.48% id in 515 aa and to Ralstonia solanacearum probable permease transporter transmembrane protein rsc2040 or rs03605 SWALL:Q8XXS3 (EMBL:AL646067) (538 aa) fasta scores: E(): 3.8e-109, 64.2% id in 542 aa; branched-chain amino acid transport system permease 3175261..3176883 Burkholderia pseudomallei K96243 3092033 YP_109249.1 CDS BPSL2653 NC_006350.1 3176885 3178087 D Similar to Yersinia pestis branched-chain amino acid transport system, permease component ypo1189 SWALL:Q8ZGT8 (EMBL:AJ414147) (358 aa) fasta scores: E(): 2.4e-77, 62.17% id in 341 aa, and to Ralstonia solanacearum probable permease transporter transmembrane protein rsc2039 or rs03604 SWALL:Q8XXS4 (EMBL:AL646067) (396 aa) fasta scores: E(): 1.1e-100, 74.86% id in 362 aa; branched-chain amino acid transport system permease 3176885..3178087 Burkholderia pseudomallei K96243 3092034 YP_109250.1 CDS BPSL2654 NC_006350.1 3178084 3178947 D Similar to Yersinia pestis ABC transport ATP-binding subunit ypo1190 SWALL:Q8ZGT7 (EMBL:AJ414147) (278 aa) fasta scores: E(): 8.5e-43, 61.22% id in 245 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2038 or rs03603 SWALL:Q8XXS5 (EMBL:AL646067) (287 aa) fasta scores: E(): 2e-63, 72.69% id in 282 aa; ABC transport ATP-binding subunit 3178084..3178947 Burkholderia pseudomallei K96243 3093568 YP_109251.1 CDS BPSL2655 NC_006350.1 3178952 3179644 D Similar to Yersinia pestis ABC transport ATP-binding subunit ypo1191 SWALL:Q8ZGT6 (EMBL:AJ414147) (232 aa) fasta scores: E(): 1.6e-45, 60.94% id in 233 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2037 or rs03602 SWALL:Q8XXS6 (EMBL:AL646067) (230 aa) fasta scores: E(): 1.1e-56, 74.34% id in 230 aa; ABC transport ATP-binding subunit 3178952..3179644 Burkholderia pseudomallei K96243 3093569 YP_109252.1 CDS UreD NC_006350.1 3179763 3180761 D Similar to Alcaligenes eutrophus urease accessory protein UreD1 SWALL:URD1_ALCEU (SWALL:O30332) (289 aa) fasta scores: E(): 1.3e-53, 54% id in 287 aa, and to Ralstonia solanacearum probable urease accessory protein UreD or rsc2036 or rs03030 SWALL:Q8XXS7 (EMBL:AL646067) (295 aa) fasta scores: E(): 1.6e-54, 53.87% id in 284 aa; UreD-family accessory protein 3179763..3180761 Burkholderia pseudomallei K96243 3092926 YP_109253.1 CDS ureA NC_006350.1 3180983 3181285 D UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3180983..3181285 Burkholderia pseudomallei K96243 3093579 YP_109254.1 CDS ureB NC_006350.1 3181375 3181680 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 3181375..3181680 Burkholderia pseudomallei K96243 3093580 YP_109255.1 CDS ureC NC_006350.1 3181745 3183451 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3181745..3183451 Burkholderia pseudomallei K96243 3092913 YP_109256.1 CDS ureE NC_006350.1 3183469 3184086 D involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 3183469..3184086 Burkholderia pseudomallei K96243 3092927 YP_109257.1 CDS ureF NC_006350.1 3184073 3184753 D Similar to Klebsiella aerogenes urease accessory protein UreF SWALL:UREF_KLEAE (SWALL:P18318) (224 aa) fasta scores: E(): 1.5e-15, 33.04% id in 233 aa, and to Ralstonia solanacearum probable urease accessory protein UreF or rsc2030 or rs03600 SWALL:Q8XXT3 (EMBL:AL646067) (229 aa) fasta scores: E(): 1.5e-40, 55.94% id in 227 aa; urease accessory protein 3184073..3184753 Burkholderia pseudomallei K96243 3093271 YP_109258.1 CDS ureG NC_006350.1 3184784 3185434 D Similar to Bordetella bronchiseptica urease accessory protein UreG SWALL:UREG_BORBR (SWALL:O06709) (214 aa) fasta scores: E(): 2.3e-55, 77.83% id in 203 aa and to Ralstonia solanacearum probable urease accessory protein UreG or rsc2029 or rs03595 SWALL:Q8XXT4 (EMBL:AL646067) (210 aa) fasta scores: E(): 5.2e-60, 86.7% id in 203 aa; urease accessory protein 3184784..3185434 Burkholderia pseudomallei K96243 3093272 YP_109259.1 CDS waaA NC_006350.1 3185671 3187056 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(3185671..3187056) Burkholderia pseudomallei K96243 3094084 YP_109260.1 CDS BPSL2664 NC_006350.1 3187094 3187978 R Similar to Yersinia pestis hypothetical protein Ypo1650 SWALL:Q8ZFP4 (EMBL:AJ414149) (300 aa) fasta scores: E(): 2.3e-53, 51.86% id in 295 aa; hypothetical protein complement(3187094..3187978) Burkholderia pseudomallei K96243 3094875 YP_109261.1 CDS waaC1 NC_006350.1 3187994 3188989 R Similar to Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 2.1e-16, 38.71% id in 310 aa, and to Burkholderia cepacia heptosyltransferase I WaaC SWALL:Q937V3 (EMBL:AJ302064) (331 aa) fasta scores: E(): 1.7e-117, 89.12% id in 331 aa; lipopolysaccharide heptosyltransferase-1 complement(3187994..3188989) Burkholderia pseudomallei K96243 3093034 YP_109262.1 CDS pgm NC_006350.1 3189170 3190564 R Similar to Neisseria meningitidis phosphoglucomutase Pgm or nmb0790 SWALL:PGMU_NEIMB (SWALL:P40391) (460 aa) fasta scores: E(): 1.2e-98, 56% id in 466 aa and to Ralstonia solanacearum phosphomannomutase or phosphoglucomutase rsc0691 or rs01596 SWALL:Q8Y1J9 (EMBL:AL646060) (461 aa) fasta scores: E(): 1.6e-123, 68.46% id in 463 aa; phosphoglucomutase complement(3189170..3190564) Burkholderia pseudomallei K96243 3094110 YP_109263.1 CDS BPSL2667 NC_006350.1 3190822 3192081 D Similar to Escherichia coli lipopolysaccharide biosynthesis protein WzxC or Wzx or b2046 SWALL:WZXC_ECOLI (SWALL:P77377) (492 aa) fasta scores: E(): 0.012, 22.33% id in 412 aa, Ralstonia solanacearum lipopolysaccharide O-side chain biosynthesis transmembrane protein rsc0686 or rs01591 SWALL:Q8Y1K4 (EMBL:AL646060) (422 aa) fasta scores: E(): 1.6e-26, 28.7% id in 425 aa and to Salmonella typhimurium O-antigen translocase in LPS biosyntesis WzxE or stm3926 SWALL:Q9L6Q9 (EMBL:AE008883) (416 aa) fasta scores: E(): 5.7e-08, 24.39% id in 410 aa; lipopolysaccharide biosynthesis protein 3190822..3192081 Burkholderia pseudomallei K96243 3094876 YP_109264.1 CDS BPSL2668 NC_006350.1 3192078 3192914 D Weakly similar to Rhizobium loti probable glycosyl transferase mlr1944 SWALL:Q98JH2 (EMBL:AP002998) (368 aa) fasta scores: E(): 1.2e-09, 31.81% id in 220 aa and to Vibrio cholerae sugar transferase SWALL:O34234 (EMBL:Y07786) (337 aa) fasta scores: E(): 2e-09, 27.14% id in 210 aa; glycosyl transferase 3192078..3192914 Burkholderia pseudomallei K96243 3093406 YP_109265.1 CDS BPSL2669 NC_006350.1 3192943 3194100 D Similar to Rhizobium meliloti glycosyltransferase rb0735 or smb21231 SWALL:Q92VG9 (EMBL:AL603644) (384 aa) fasta scores: E(): 1.3e-45, 42.26% id in 362 aa, and to Pseudomonas aeruginosa probable glycosyl transferase pa1385 SWALL:Q9I3V9 (EMBL:AE004568) (374 aa) fasta scores: E(): 4.1e-40, 36.61% id in 366 aa; glycosyl transferase 3192943..3194100 Burkholderia pseudomallei K96243 3093407 YP_109266.1 CDS BPSL2670 NC_006350.1 3194115 3195137 D Previously sequenced as Burkholderia pseudomallei UDP-glucose 4-epimerase SWALL:O69132 (EMBL:AF064070) (340 aa) fasta scores: E(): 3.1e-125, 100% id in 340 aa and similar to Bacillus subtilis UDP-glucose 4-epimerase GalE SWALL:GALE_BACSU (SWALL:P55180) (339 aa) fasta scores: E(): 6.8e-80, 65.16% id in 333 aa; UDP-glucose 4-epimerase 3194115..3195137 Burkholderia pseudomallei K96243 3094520 YP_109267.1 CDS BPSL2671 NC_006350.1 3195165 3196271 D Previously sequenced as Burkholderia pseudomallei undecaprenyl phosphate N-acetylglucosaminyltransferase SWALL:O69131 (EMBL:AF064070) (368 aa) fasta scores: E(): 1.8e-136, 100% id in 368 aa, and to Sulfolobus acidocaldarius UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase GnpTA SWALL:GPT_SULAC (SWALL:P39465) (328 aa) fasta scores: E(): 2.2e-12, 29.21% id in 291 aa; undecaprenyl phosphate N-acetylglucosaminyltransferase 3195165..3196271 Burkholderia pseudomallei K96243 3094521 YP_109268.1 CDS wbiI NC_006350.1 3196645 3198558 R Previously sequenced as Burkholderia pseudomallei epimerase/dehydratase WbiI SWALL:O69130 (EMBL:AF064070) (637 aa) fasta scores: E(): 0, 99.68% id in 637 aa and similar to Staphylococcus aureus capsular polysaccharide biosynthesis protein CapD SWALL:CAPD_STAAU (SWALL:P39853) (599 aa) fasta scores: E(): 3.5e-77, 40.51% id in 580 aa and to Burkholderia mallei epimerase/dehydratase WbiI SWALL:Q9AEU8 (EMBL:AY028370) (637 aa) fasta scores: E(): 0, 100% id in 637 aa; epimerase/dehydratase polysaccharide-related biosynthesis protein complement(3196645..3198558) Burkholderia pseudomallei K96243 3093475 YP_109269.1 CDS wbiH NC_006350.1 3198565 3199575 R Previously sequenced as Burkholderia pseudomallei undecaprenyl phosphate N-acetylglucosaminyltransferase WbiH SWALL:O69129 (EMBL:AF064070) (336 aa) fasta scores: E(): 1e-130, 100% id in 336 aa. Also similar to Xanthomonas axonopodis lipopolysaccharide core biosynthesis protein rfb303 or xac2294 SWALL:AAM37147 (EMBL:AE011866) (322 aa) fasta scores: E(): 8.6e-23, 34.51% id in 310 aa; undecaprenyl phosphate N-acetylglucosaminyltransferase complement(3198565..3199575) Burkholderia pseudomallei K96243 3093474 YP_109270.1 CDS wbiG NC_006350.1 3199593 3200558 R Previously sequenced as Burkholderia pseudomallei epimerase/dehydratase WbiG SWALL:O69128 (EMBL:AF064070) (321 aa) fasta scores: E(): 8.6e-126, 99.37% id in 321 aa. Also similar to Vibrio cholerae UDP-glucose 4-epimerase GalE or WbfT SWALL:GALE_VIBCH (SWALL:Q56623) (328 aa) fasta scores: E(): 5.1e-38, 37.57% id in 322 aa; epimerase/dehydratase complement(3199593..3200558) Burkholderia pseudomallei K96243 3092846 YP_109271.1 CDS wbiF NC_006350.1 3200555 3201385 R Previously sequenced as Burkholderia pseudomallei glycosyl transferase WbiF SWALL:O69127 (EMBL:AF064070) (276 aa) fasta scores: E(): 2e-117, 99.63% id in 276 aa. Also similar to Burkholderia mallei glycosyl transferase WbiF SWALL:Q9AEU9 (EMBL:AY028370) (276 aa) fasta scores: E(): 1.7e-116, 98.91% id in 276 aa and to Ralstonia solanacearum probable glycosyl transferase rsc0688 or rs01593 SWALL:Q8Y1K2 (EMBL:AL646060) (275 aa) fasta scores: E(): 7.4e-23, 32.46% id in 268 aa; glycosyl transferase complement(3200555..3201385) Burkholderia pseudomallei K96243 3092845 YP_109272.1 CDS wbiE NC_006350.1 3201460 3203301 R Previously sequenced as Burkholderia pseudomallei glycosyl transferase WbiE SWALL:O69126 (EMBL:AF064070) (613 aa) fasta scores: E(): 0, 99.51% id in 613 aa.Also similar to Burkholderia mallei glycosyl transferase WbiE SWALL:Q9AEV0 (EMBL:AY028370) (613 aa) fasta scores: E(): 0, 99.67% id in 613 aa; glycosyl transferase complement(3201460..3203301) Burkholderia pseudomallei K96243 3092805 YP_109273.1 CDS wbiD NC_006350.1 3203353 3205077 R Previously sequenced as Burkholderia pseudomallei O-antigen methyl transferase WbiD SWALL:O69125 (EMBL:AF064070) (574 aa) fasta scores: E(): 0, 99.65% id in 574 aa. Also similar to Burkholderia mallei O-antigen methyl transferase WbiD SWALL:Q9AEV1 (EMBL:AY028370) (574 aa) fasta scores: E(): 0, 99.47% id in 574 aa and to Rhizobium loti O-antigen methyl transferase mlr7341 SWALL:Q986I5 (EMBL:AP003011) (664 aa) fasta scores: E(): 3.9e-75, 39.27% id in 555 aa; O-antigen methyl transferase complement(3203353..3205077) Burkholderia pseudomallei K96243 3093124 YP_109274.1 CDS wbiC NC_006350.1 3205081 3206004 R Previously sequenced as Burkholderia pseudomallei glycosyl transferase WbiC SWALL:O69124 (EMBL:AF064070) (307 aa) fasta scores: E(): 7e-121, 100% id in 307 aa. Also similar to Rhizobium loti glycosyl transferase mlr7339 SWALL:Q986I6 (EMBL:AP003011) (296 aa) fasta scores: E(): 5.3e-54, 48.82% id in 297 aa; glycosyl transferase complement(3205081..3206004) Burkholderia pseudomallei K96243 3093123 YP_109275.1 CDS wbiB NC_006350.1 3206025 3207116 R Previously sequenced as Burkholderia pseudomallei epimerase/dehydratase WbiB SWALL:O69123 (EMBL:AF064070) (363 aa) fasta scores: E(): 1e-138, 100% id in 363 aa. Also similar to Burkholderia mallei epimerase/dehydratase WbiB SWALL:Q9AEV2 (EMBL:AY028370) (363 aa) fasta scores: E(): 2.1e-138, 99.72% id in 363 aa and to Rhizobium loti sugar nucleotide epimerase/dehydratase mlr7558 SWALL:Q985R8 (EMBL:AP003012) (352 aa) fasta scores: E(): 1.3e-76, 57.71% id in 350 aa; epimerase/dehydratase complement(3206025..3207116) Burkholderia pseudomallei K96243 3094051 YP_109276.1 CDS wbiA NC_006350.1 3207116 3208354 R Previously sequenced as Burkholderia pseudomallei O-antigen acetylase WbiA SWALL:O69122 (EMBL:AF064070) (412 aa) fasta scores: E(): 3.9e-175, 100% id in 412 aa. Also similar to Burkholderia thailandensis O-antigen acetylase WbiA SWALL:Q93SI5 (EMBL:AY033501) (412 aa) fasta scores: E(): 4.5e-166, 94.9% id in 412 aa; O-antigen acetylase complement(3207116..3208354) Burkholderia pseudomallei K96243 3094050 YP_109277.1 CDS wzt NC_006350.1 3208351 3209760 R Previously sequenced as Burkholderia pseudomallei ABC-2 transporter hydrophilic component Wzt SWALL:O69121 (EMBL:AF064070) (469 aa) fasta scores: E(): 2.1e-157, 100% id in 469 aa. Also similar to Burkholderia mallei ABC-2 transporter hydrophilic component Wzt SWALL:Q9AEV3 (EMBL:AY028370) (469 aa) fasta scores: E(): 1.7e-156, 99.57% id in 469 aa and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa1386 SWALL:Q9I3V8 (EMBL:AE004568) (422 aa) fasta scores: E(): 5.3e-35, 40.04% id in 427 aa; ABC transporter ATP-binding protein complement(3208351..3209760) Burkholderia pseudomallei K96243 3092886 YP_109278.1 CDS wzm NC_006350.1 3209750 3210583 R Identical to Burkholderia mallei ABC-2 transporter integral membrane component Wzm SWALL:Q9AEV4 (EMBL:AY028370) (277 aa) fasta scores: E(): 3.9e-105, 100% id in 277 aa. Similar to Serratia marcescens ABC transporter system integral membrane protein SWALL:O52482 (EMBL:AF038816) (277 aa) fasta scores: E(): 2.5e-58, 57.46% id in 268 aa; ABC transporter membrane permease complement(3209750..3210583) Burkholderia pseudomallei K96243 3093940 YP_109279.1 CDS rmlD NC_006350.1 3210610 3211506 R Similar to Escherichia coli dTDP-4-dehydrorhamnose reductase RfbD or Rmld or b2040 SWALL:RBD1_ECOLI (SWALL:P37760) (299 aa) fasta scores: E(): 3.8e-46, 44.51% id in 301 aa. Previously sequenced as Burkholderia pseudomallei dTDP-4-keto-L-rhamnose reductase RmlD SWALL:O69119 (EMBL:AF064070) (298 aa) fasta scores: E(): 4e-112, 100% id in 298 aa; dTDP-4-dehydrorhamnose reductase complement(3210610..3211506) Burkholderia pseudomallei K96243 3093148 YP_109280.1 CDS rmlC NC_006350.1 3211503 3212054 R Previously sequenced as Burkholderia pseudomallei dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC SWALL:O69118 (EMBL:AF064070) (183 aa) fasta scores: E(): 4.2e-74, 100% id in 183 aa and similar to Shigella boydii dTDP-6-deoxy-D-glucose-3,5 epimerase RmlC SWALL:Q93CV1 (EMBL:AF402312) (189 aa) fasta scores: E(): 6.3e-44, 61.79% id in 178 aa; dTDP-6-deoxy-D-glucose-3,5 epimerase complement(3211503..3212054) Burkholderia pseudomallei K96243 3091968 YP_109281.1 CDS rmlA NC_006350.1 3212039 3212932 R Previously sequenced as Burkholderia pseudomallei glucose-1-phosphate thymidyltransferase RmlA SWALL:O69117 (EMBL:AF064070) (297 aa) fasta scores: E(): 1.6e-120, 100% id in 297 aa and similar to Salmonella anatum glucose-1-phosphate thymidylyltransferase RfbA SWALL:RFBA_SALAN (SWALL:P55254) (292 aa) fasta scores: E(): 8.8e-87, 73.07% id in 286 aa; glucose-1-phosphate thymidylyltransferase complement(3212039..3212932) Burkholderia pseudomallei K96243 3093247 YP_109282.1 CDS rmlB NC_006350.1 3212944 3214005 R Previously sequenced as Burkholderia pseudomallei dTDP-D-glucose 4,6-dehydratase RmlB SWALL:O69116 (EMBL:AF064070) (353 aa) fasta scores: E(): 5.6e-143, 100% id in 353 aa and similar to Xanthomonas campestris dTDP-glucose 4,6-dehydratase RfbB or RmlB or xcc0621 SWALL:RFBB_XANCP (SWALL:P55295) (351 aa) fasta scores: E(): 1.2e-88, 66.56% id in 341 aa; dTDP-glucose 4,6-dehydratase complement(3212944..3214005) Burkholderia pseudomallei K96243 3091967 YP_109283.1 CDS apaH NC_006350.1 3214383 3215231 D hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 3214383..3215231 Burkholderia pseudomallei K96243 3092602 YP_109284.1 CDS plsC NC_006350.1 3215361 3216230 R Previously sequenced as Burkholderia pseudomallei 1-acyl-SN-glycerol-3-phosphate acyltransferase PlsC SWALL:O69114 (EMBL:AF064070) (289 aa) fasta scores: E(): 1.5e-111, 100% id in 289 aa. Also highly similar to Neisseria meningitidis 1-acyl-SN-glycerol-3-phosphate acyltransferase Plsc or nmb1294 SWALL:PLSC_NEIMB (SWALL:Q9JZ47) (255 aa) fasta scores: E(): 3.4e-18, 33.88% id in 242 aa; 1-acyl-SN-glycerol-3-phosphate acyltransferase complement(3215361..3216230) Burkholderia pseudomallei K96243 3092632 YP_109285.1 CDS pyrX NC_006350.1 3216245 3217522 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(3216245..3217522) Burkholderia pseudomallei K96243 3092915 YP_109286.1 CDS pyrB NC_006350.1 3217614 3218645 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase complement(3217614..3218645) Burkholderia pseudomallei K96243 3093493 YP_109287.1 CDS pyrR NC_006350.1 3218726 3219244 R regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase complement(3218726..3219244) Burkholderia pseudomallei K96243 3093162 YP_109288.1 CDS BPSL2692 NC_006350.1 3219231 3219671 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(3219231..3219671) Burkholderia pseudomallei K96243 3093865 YP_109289.1 CDS BPSL2693 NC_006350.1 3219668 3220246 R Similar to Ralstonia solanacearum hypothetical protein rsc0675 or rs01580 SWALL:Q8Y1L5 (EMBL:AL646060) (190 aa) fasta scores: E(): 6e-57, 76.04% id in 192 aa and to Pseudomonas aeruginosa hypothetical protein AlgH or pa0405 SWALL:Q9RQ16 (EMBL:AF137022) (189 aa) fasta scores: E(): 1.4e-35, 53.88% id in 193 aa; hypothetical protein complement(3219668..3220246) Burkholderia pseudomallei K96243 3093866 YP_109290.1 CDS BPSL2694 NC_006350.1 3220452 3221783 R hypothetical protein complement(3220452..3221783) Burkholderia pseudomallei K96243 3093855 YP_109291.1 CDS rubA NC_006350.1 3221882 3222052 R Highly similar to Acinetobacter calcoaceticus rubredoxin RubA SWALL:RUBR_ACICA (SWALL:P42453) (54 aa) fasta scores: E(): 1e-15, 60.37% id in 53 aa and to Ralstonia solanacearum probable rubredoxin protein rsc0667 or rs01572 SWALL:Q8Y1M3 (EMBL:AL646060) (60 aa) fasta scores: E(): 7.6e-23, 87.5% id in 56 aa; rubredoxin complement(3221882..3222052) Burkholderia pseudomallei K96243 3092277 YP_109292.1 CDS BPSL2696 NC_006350.1 3222272 3223120 D Weakly similar to many including: Pseudomonas aeruginosa phosphomethylpyrimidine kinase ThiD or pa3975 SWALL:Q9HX41 (EMBL:AE004815) (265 aa) fasta scores: E(): 2.1e-19, 34.1% id in 261 aa, and to Streptomyces coelicolor phosphomethylpyrimidine kinase ThiD or sco5563 or sc7a1.07 SWALL:THID_STRCO (SWALL:Q9ZBR6) (269 aa) fasta scores: E(): 6.8e-15, 33.96% id in 265 aa; kinase 3222272..3223120 Burkholderia pseudomallei K96243 3093856 YP_109293.1 CDS groEL NC_006350.1 3223479 3225119 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL complement(3223479..3225119) Burkholderia pseudomallei K96243 3094280 YP_109294.1 CDS groES NC_006350.1 3225167 3225460 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3225167..3225460) Burkholderia pseudomallei K96243 3094607 YP_109295.1 CDS BPSL2699 NC_006350.1 3226050 3228209 R Similar to Ralstonia solanacearum probable signal peptide protein rsp0803 or rs01904 SWALL:Q8XRM8 (EMBL:AL646081) (667 aa) fasta scores: E(): 4.3e-26, 34.31% id in 746 aa. Note the product of this CDS is highly repetitive with a 4.5 X STLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASN A VGTLTNLANNNPLPGALSNAV degenerate repeat sequence; hypothetical protein complement(3226050..3228209) Burkholderia pseudomallei K96243 3091876 YP_109296.1 CDS BPSL2700 NC_006350.1 3229267 3229701 R Similar to several including: Bacillus halodurans cinnamoyl ester hydrolase bh0737 SWALL:Q9KEW2 (EMBL:AP001509) (118 aa) fasta scores: E(): 3.9e-22, 58.71% id in 109 aa and to Bacillus subtilis hypothetical protein YybR SWALL:YYBR_BACSU (SWALL:P37486) (125 aa) fasta scores: E(): 2.8e-21, 60.39% id in 101 aa; hypothetical protein complement(3229267..3229701) Burkholderia pseudomallei K96243 3091877 YP_109297.1 CDS BPSL2701 NC_006350.1 3229950 3230957 D Similar to many alcohol dehydrogenases including: Xanthomonas campestris xcc2730 SWALL:Q8P783 (EMBL:AE012386) (335 aa) fasta scores: E(): 1.6e-86, 71.77% id in 333 aa and to Rhizobium loti alcohol dehydrogenase, NADPH quinone oxidoreductase mll3915 SWALL:Q98F62 (EMBL:AP003003) (338 aa) fasta scores: E(): 7.5e-43, 43.28% id in 335 aa; alcohol dehydrogenase 3229950..3230957 Burkholderia pseudomallei K96243 3094446 YP_109298.1 CDS BPSL2702 NC_006350.1 3230981 3231949 R hypothetical protein complement(3230981..3231949) Burkholderia pseudomallei K96243 3094447 YP_109299.1 CDS BPSL2703 NC_006350.1 3232494 3233009 R Similar to Pseudomonas fluorescens protein activator of alkane oxidation PraB SWALL:Q9AE74 (EMBL:AJ009579) (168 aa) fasta scores: E(): 1.8e-07, 30.67% id in 163 aa and to Pseudomonas aeruginosa protein activator precursor Pra or pa4590 SWALL:Q51428 (EMBL:L08966) (162 aa) fasta scores: E(): 2.8e-06, 30.28% id in 175 aa; hypothetical protein complement(3232494..3233009) Burkholderia pseudomallei K96243 3094189 YP_109300.1 CDS BPSL2704 NC_006350.1 3233125 3234030 R Similar in part to Ralstonia solanacearum outer membrane Wsignal peptide protein OmpW or rsc3350 or rs02625 SWALL:Q8XU43 (EMBL:AL646074) (241 aa) fasta scores: E(): 0.00076, 34.67% id in 274 aa; OmpW family exported protein complement(3233125..3234030) Burkholderia pseudomallei K96243 3094190 YP_109301.1 CDS BPSL2705 NC_006350.1 3234027 3235280 R lipoprotein complement(3234027..3235280) Burkholderia pseudomallei K96243 3093984 YP_109302.1 CDS BPSL2706 NC_006350.1 3235340 3236938 R Weakly similar to Ralstonia solanacearum lipoprotein rsp0116 or rs03006 SWALL:Q8XTJ2 (EMBL:AL646076) (427 aa) fasta scores: E(): 0.00043, 25.05% id in 439 aa; lipoprotein complement(3235340..3236938) Burkholderia pseudomallei K96243 3093985 YP_109303.1 CDS BPSL2707 NC_006350.1 3237675 3238121 R Similar to Agrobacterium tumefaciens hypothetical protein Agr_c_1731p SWALL:Q8U5H0 (EMBL:AE008025) (190 aa) fasta scores: E(): 1.6e-23, 58.77% id in 114 aa, and to Xylella fastidiosa hypothetical protein Xf0240 SWALL:Q9PGQ8 (EMBL:AE003878) (142 aa) fasta scores: E(): 8.5e-18, 47.82% id in 115 aa; hypothetical protein complement(3237675..3238121) Burkholderia pseudomallei K96243 3091690 YP_109304.1 CDS BPSL2708 NC_006350.1 3238401 3239633 D Similar to several proteins of undefined function including: Yersinia pestis exported protein Ypo0800 SWALL:Q8ZHT4 (EMBL:AJ414144) (295 aa) fasta scores: E(): 4.4e-66, 59.58% id in 287 aa and Pseudomonas aeruginosa hypothetical protein Pa0057 SWALL:Q9I775 (EMBL:AE004445) (295 aa) fasta scores: E(): 1.1e-64, 60.2% id in 299 aa; exported metallo-beta-lactamase-family protein 3238401..3239633 Burkholderia pseudomallei K96243 3091691 YP_109305.1 CDS BPSL2709 NC_006350.1 3239812 3240399 D Similar to Streptomyces coelicolor DNA-binding protein Sco6802 or sc1a2.11 SWALL:Q9L230 (EMBL:AL138598) (192 aa) fasta scores: E(): 5.8e-21, 43.95% id in 182 aa and to Ralstonia solanacearum transcription regulatory protein rsc3132 or rs00471 SWALL:Q8XUQ4 (EMBL:AL646073) (209 aa) fasta scores: E(): 8.6e-38, 58.33% id in 192 aa; DNA-binding protein 3239812..3240399 Burkholderia pseudomallei K96243 3093465 YP_109306.1 CDS BPSL2710 NC_006350.1 3240396 3240923 D Similar to Pseudomonas syringae acetyltransferase (tabtoxin resistance protein) Ttr SWALL:TTR_PSESZ (SWALL:P16966) (177 aa) fasta scores: E(): 6.6e-11, 32.95% id in 176 aa and to Pseudomonas aeruginosa hypothetical protein Pa1885 SWALL:Q9I2L2 (EMBL:AE004614) (177 aa) fasta scores: E(): 7.2e-39, 63.9% id in 169 aa, and to Agrobacterium tumefaciens acetyltransferase atu0246 or agr_c_420 SWALL:Q8UIP7 (EMBL:AE008997) (172 aa) fasta scores: E(): 1.1e-28, 50.88% id in 169 aa; acetyltransferase 3240396..3240923 Burkholderia pseudomallei K96243 3093466 YP_109307.1 CDS BPSL2711 NC_006350.1 3241273 3241896 D Similar to Agrobacterium tumefaciens RhtB family transporter atu1170 or agr_c_2164 SWALL:Q8UG71 (EMBL:AE009080) (210 aa) fasta scores: E(): 5.3e-25, 39.28% id in 196 aa, Caulobacter crescentus efflux protein, lyse family cc0029 SWALL:Q9AC37 (EMBL:AE005677) (210 aa) fasta scores: E(): 3.1e-11, 31.03% id in 203 aa, and to Escherichia coli, Escherichia coli O6 and Escherichia coli O157:H7 homoserine/homoserine lactone efflux protein RhtB or b3824 or c4746 or z5345 or ecs4754 SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 1.3e-09, 27.58% id in 203 aa; amino acid transporter LysE 3241273..3241896 Burkholderia pseudomallei K96243 3093194 YP_109308.1 CDS BPSL2712 NC_006350.1 3242349 3243485 D Similar to Ralstonia solanacearum glycerophosphoryl diester phosphodiesterase, periplasmic precursor protein GlpQ or rsc0502 or rs05020 SWALL:Q8Y234 (EMBL:AL646059) (378 aa) fasta scores: E(): 4.4e-95, 68.66% id in 383 aa, and to Xanthomonas campestris glycerophosphoryl diester phosphodiesterase GlpQ or xcc4234 SWALL:AAM43450 (EMBL:AE012551) (370 aa) fasta scores: E(): 1.5e-65, 55.75% id in 339 aa; hydrolase 3242349..3243485 Burkholderia pseudomallei K96243 3093195 YP_109309.1 CDS BPSL2713 NC_006350.1 3243615 3245057 D Similar to Streptomyces coelicolor transmembrane transport protein Sco2309 or scc30.17C SWALL:Q9L004 (EMBL:AL352972) (489 aa) fasta scores: E(): 1.4e-58, 42.79% id in 458 aa, Streptomyces roseofulvus antibiotic antiporter FrnF SWALL:O68912 (EMBL:AF058302) (517 aa) fasta scores: E(): 1.1e-57, 41.17% id in 476 aa and to Streptomyces lipmanii puromycin resistance protein Pur8 SWALL:PUR8_STRLP (SWALL:P42670) (503 aa) fasta scores: E(): 2.3e-53, 39.33% id in 478 aa; membrane transport protein 3243615..3245057 Burkholderia pseudomallei K96243 3094407 YP_109310.1 CDS BPSL2714 NC_006350.1 3245554 3246342 D Similar to several including: Ralstonia solanacearum probable transmembrane protein rsc2426 or rs02683 SWALL:Q8XWP7 (EMBL:AL646070) (253 aa) fasta scores: E(): 5.2e-39, 49.4% id in 253 aa and to Bacillus subtilis hypothetical protein YjnA SWALL:O34578 (EMBL:AF015825) (254 aa) fasta scores: E(): 1.3e-28, 38.88% id in 252 aa; hypothetical protein 3245554..3246342 Burkholderia pseudomallei K96243 3094408 YP_109311.1 CDS BPSL2715 NC_006350.1 3246675 3248522 R Similar to several proteins of unknown function including: Deinococcus radiodurans carboxypeptidase-related protein dr0964 SWALL:Q9RVQ8 (EMBL:AE001948) (500 aa) fasta scores: E(): 2.8e-24, 34.68% id in 542 aa, and to Caulobacter crescentus hypothetical protein Cc3418 cc3418 SWALL:Q9A2Y8 (EMBL:AE006002) (504 aa) fasta scores: E(): 1.6e-21, 31.11% id in 540 aa; lipoprotein complement(3246675..3248522) Burkholderia pseudomallei K96243 3092215 YP_109312.1 CDS BPSL2716 NC_006350.1 3249128 3251227 R Similar to Ralstonia solanacearum probable D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane rsc1334 or rs02856 SWALL:Q8XZR1 (EMBL:AL646064) (725 aa) fasta scores: E(): 6.5e-92, 49.58% id in 728 aa and to Alcaligenes eutrophus D--3-hydroxybutyrate oligomer hydrolase SWALL:O05992 (EMBL:AB003701) (757 aa) fasta scores: E(): 2.4e-111, 50.9% id in 715 aa; exported hydrolase complement(3249128..3251227) Burkholderia pseudomallei K96243 3092216 YP_109313.1 CDS BPSL2717 NC_006350.1 3251347 3251715 R lipoprotein complement(3251347..3251715) Burkholderia pseudomallei K96243 3093869 YP_109314.1 CDS BPSL2718 NC_006350.1 3252110 3253627 D Weakly similar to Pseudomonas aeruginosa hypothetical protein Pa3848 SWALL:Q9HXF8 (EMBL:AE004802) (451 aa) fasta scores: E(): 1.9e-38, 34.45% id in 418 aa; hypothetical protein 3252110..3253627 Burkholderia pseudomallei K96243 3093870 YP_109315.1 CDS BPSL2719 NC_006350.1 3253725 3254363 D Weakly similar to several including: Pseudomonas aeruginosa hypothetical protein Pa0118 SWALL:Q9I714 (EMBL:AE004450) (195 aa) fasta scores: E(): 1.4e-10, 29.1% id in 189 aa, and to Alcaligenes faecalis isomerase PhnD SWALL:Q9WXH0 (EMBL:AB024945) (196 aa) fasta scores: E(): 2.7e-08, 26.48% id in 185 aa; isomerase 3253725..3254363 Burkholderia pseudomallei K96243 3094046 YP_109316.1 CDS BPSL2720 NC_006350.1 3254437 3255384 D Similar to many LysR-family regultors: Ralstonia solanacearum probable transcription regulator protein rsc2094 or rs03659 SWALL:Q8XXL9 (EMBL:AL646068) (316 aa) fasta scores: E(): 3.3e-53, 47.98% id in 298 aa and to Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 2.6e-25, 33.33% id in 294 aa; LysR family transcriptional regulator 3254437..3255384 Burkholderia pseudomallei K96243 3094047 YP_109317.1 CDS BPSL2721 NC_006350.1 3255467 3256567 R Similar to Pseudomonas aeruginosa probable permease of ABC transporter pa2914 SWALL:Q9HZT3 (EMBL:AE004717) (343 aa) fasta scores: E(): 1.2e-56, 55.78% id in 346 aa and to Rhizobium loti ABC transporter permease mlr8229 SWALL:Q983Q1 (EMBL:AP003013) (349 aa) fasta scores: E(): 6.5e-44, 46.7% id in 364 aa; FecCD-family membrane transporter protein complement(3255467..3256567) Burkholderia pseudomallei K96243 3093422 YP_109318.1 CDS BPSL2722 NC_006350.1 3256564 3257607 R Similar to Streptomyces coelicolor iron transport lipoprotein Sco7218 or sc2h12.17 SWALL:Q9K467 (EMBL:AL359215) (345 aa) fasta scores: E(): 3.8e-41, 42.73% id in 337 aa and to Brucella melitensis iron transport protein bmeii0535 SWALL:Q8YCJ3 (EMBL:AE009689) (344 aa) fasta scores: E(): 4.8e-17, 28.69% id in 345 aa; membrane transport solute-binding protein complement(3256564..3257607) Burkholderia pseudomallei K96243 3093423 YP_109319.1 CDS BPSL2723 NC_006350.1 3257601 3258398 R Similar to Streptomyces coelicolor Fe uptake system permease FtrE or sco0998 or 2scg2.11 SWALL:Q9EX40 (EMBL:AL445963) (272 aa) fasta scores: E(): 2.4e-44, 53.51% id in 256 aa and to Bacillus halodurans iron (III) dicitrate transport system bh1587 SWALL:Q9KCI4 (EMBL:AP001512) (491 aa) fasta scores: E(): 1.5e-30, 42.08% id in 240 aa; Fe uptake system permease complement(3257601..3258398) Burkholderia pseudomallei K96243 3094842 YP_109320.1 CDS BPSL2724 NC_006350.1 3258434 3260704 R Similar to Xanthomonas axonopodis TonB-dependent receptor FhuA or xac4062 SWALL:Q8PFC1 (EMBL:AE012054) (726 aa) fasta scores: E(): 8.7e-33, 30.99% id in 742 aa, Anabaena sp. ferrichrome-iron receptor all2148 SWALL:Q8YV33 (EMBL:AP003588) (863 aa) fasta scores: E(): 5.7e-28, 26.62% id in 725 aa and to Salmonella typhimurium ferrioxamine B receptor precursor FoxA or Stm0364 SWALL:FOXA_SALTY (SWALL:Q56145) (702 aa) fasta scores: E(): 7.4e-23, 24.6% id in 687 aa; TonB-dependent outer-membrane receptor protein complement(3258434..3260704) Burkholderia pseudomallei K96243 3094843 YP_109321.1 CDS BPSL2725 NC_006350.1 3261197 3261667 R hypothetical protein complement(3261197..3261667) Burkholderia pseudomallei K96243 3092261 YP_109322.1 CDS BPSL2726 NC_006350.1 3261786 3262568 R Weakly similar to several solute-binding proteins including: Escherichia coli molybdate-binding periplasmic protein precursor ModA or b0763 SWALL:MODA_ECOLI (SWALL:P37329) (257 aa) fasta scores: E(): 0.0012, 23.55% id in 259 aa and to Pseudomonas aeruginosa molybdate-binding periplasmic protein precursor ModA or pa1863 SWALL:Q9I2N2 (EMBL:AE004612) (251 aa) fasta scores: E(): 9.4e-07, 30% id in 250 aa; solute-binding periplasmic protein complement(3261786..3262568) Burkholderia pseudomallei K96243 3092262 YP_109323.1 CDS xdhB NC_006350.1 3262952 3265315 R Similar to many xanthine dehydrogenases including: Brucella melitensis xanthine dehydrogenase bmei1575 SWALL:Q8YFE7 (EMBL:AE009593) (781 aa) fasta scores: E(): 8.4e-158, 56.29% id in 778 aa and to Comamonas acidovorans xanthine dehydrogenase large subunit XdhB SWALL:Q8RLC0 (EMBL:AY082333) (808 aa) fasta scores: E(): 1.7e-212, 70.44% id in 785 aa; xanthine dehydrogenase large subunit complement(3262952..3265315) Burkholderia pseudomallei K96243 3092583 YP_109324.1 CDS xdhA NC_006350.1 3265344 3266861 R Similar to many xanthine dehydrogenases including: Brucella melitensis bmei1576 SWALL:Q8YFE6 (EMBL:AE009593) (519 aa) fasta scores: E(): 1.3e-73, 48.18% id in 467 aa, and to Ralstonia solanacearum XdhA or rsc2095 or rs03660 SWALL:Q8XXL8 (EMBL:AL646068) (516 aa) fasta scores: E(): 7.7e-127, 65.94% id in 505 aa; xanthine dehydrogenase complement(3265344..3266861) Burkholderia pseudomallei K96243 3093191 YP_109325.1 CDS BPSL2729 NC_006350.1 3267141 3268364 D Similar to Pseudomonas aeruginosa hypothetical protein Pa1993 SWALL:Q9I2B6 (EMBL:AE004625) (402 aa) fasta scores: E(): 9.3e-82, 60% id in 400 aa, and to Salmonella typhimurium hypothetical protein yhhs or stm3581 SWALL:Q8ZLE4 (EMBL:AE008865) (419 aa) fasta scores: E(): 6.7e-63, 53.26% id in 383 aa; major facilitator superfamily transporter 3267141..3268364 Burkholderia pseudomallei K96243 3092273 YP_109326.1 CDS BPSL2730 NC_006350.1 3268890 3269840 R Similar to Pseudomonas aeruginosa hypothetical protein Pa3897 SWALL:Q9HXB6 (EMBL:AE004807) (300 aa) fasta scores: E(): 2.9e-56, 56.49% id in 285 aa and Ralstonia solanacearum transmembrane protein rsc0151 or rs01021 SWALL:Q8Y330 (EMBL:AL646057) (309 aa) fasta scores: E(): 3.5e-16, 30.52% id in 285 aa. Note an alternative possible translational start site at codon 21.; hypothetical protein complement(3268890..3269840) Burkholderia pseudomallei K96243 3092274 YP_109327.1 CDS BPSL2731 NC_006350.1 3269871 3270869 D Similar to many proposed transcriptional regulators including: Ralstonia solanacearum probable transcription regulator protein rsp1157 or rs05428 SWALL:Q8XQR4 (EMBL:AL646083) (324 aa) fasta scores: E(): 8.9e-51, 47.41% id in 310 aa and Pseudomonas aeruginosa probable transcriptional regulator pa3898 SWALL:Q9HXB5 (EMBL:AE004807) (293 aa) fasta scores: E(): 3.4e-49, 47.81% id in 297 aa; AraC family transcriptional regulator 3269871..3270869 Burkholderia pseudomallei K96243 3091649 YP_109328.1 CDS BPSL2732 NC_006350.1 3270894 3272108 R Similar to Vibrio cholerae aminotransferase, class V vc0392 SWALL:Q9KUW7 (EMBL:AE004127) (372 aa) fasta scores: E(): 7.1e-37, 34.53% id in 362 aa and to Anabaena sp. alanine--glyoxylate aminotransferase alr1004 SWALL:Q8YY48 (EMBL:AP003584) (381 aa) fasta scores: E(): 1.5e-34, 31.97% id in 369 aa; aminotransferase complement(3270894..3272108) Burkholderia pseudomallei K96243 3091650 YP_109329.1 CDS BPSL2733 NC_006350.1 3273006 3273986 D Similar to Ralstonia solanacearum probable transcription regulator protein rsc0065 or rs02244 SWALL:Q8Y3B5 (EMBL:AL646057) (312 aa) fasta scores: E(): 2.4e-34, 35.55% id in 315 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0159 SWALL:Q9I6X3 (EMBL:AE004454) (312 aa) fasta scores: E(): 9.6e-32, 38.14% id in 291 aa; LysR family transcriptional regulator 3273006..3273986 Burkholderia pseudomallei K96243 3092160 YP_109330.1 CDS ldhA NC_006350.1 3274033 3275037 D Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 3274033..3275037 Burkholderia pseudomallei K96243 3091675 YP_109331.1 CDS BPSL2735 NC_006350.1 3275577 3276236 D Similar to many including: Ralstonia solanacearum probable oxidoreductase rsp0614 or rs03753 SWALL:Q8XS67 (EMBL:AL646079) (216 aa) fasta scores: E(): 7.4e-61, 71.15% id in 208 aa and to Thermus thermophilus NADH dehydrogenase Nox SWALL:NOX_THETH (SWALL:Q60049) (205 aa) fasta scores: E(): 0.00054, 29.7% id in 202 aa; oxidoreductase 3275577..3276236 Burkholderia pseudomallei K96243 3092161 YP_109332.1 CDS BPSL2736 NC_006350.1 3276352 3277521 D Similar to many membrane transporters including: Rhizobium loti transmembrane efflux protein mlr2770 SWALL:Q98HP8 (EMBL:AP003000) (391 aa) fasta scores: E(): 6.1e-77, 59.32% id in 386 aa and Pseudomonas aeruginosa probable mfs transporter pa4355 SWALL:Q9HW46 (EMBL:AE004851) (388 aa) fasta scores: E(): 2.8e-75, 58.29% id in 386 aa; major facilitator transporter 3276352..3277521 Burkholderia pseudomallei K96243 3092770 YP_109333.1 CDS BPSL2737 NC_006350.1 3277789 3278985 D Similar to many membrane transporters including: Pseudomonas aeruginosa probable MFS transporter pa5311 SWALL:Q9HTP3 (EMBL:AE004943) (387 aa) fasta scores: E(): 3.6e-36, 33.68% id in 383 aa and to Rhizobium meliloti transport transmembrane protein r01296 or smc01368 SWALL:Q92QM3 (EMBL:AL591786) (394 aa) fasta scores: E(): 2.4e-24, 28.61% id in 353 aa; major facilitator transporter 3277789..3278985 Burkholderia pseudomallei K96243 3092771 YP_109334.1 CDS BPSL2738 NC_006350.1 3279418 3280725 R Similar to Prokaryotic and Eukaryotic hydrolases including: Ralstonia solanacearum probable fumarylacetoacetase rsp0690 or rs01759 SWALL:Q8XRZ1 (EMBL:AL646080) (423 aa) fasta scores: E(): 7.1e-116, 69.23% id in 416 aa and to Homo sapiens fumarylacetoacetase Fah SWALL:FAAA_HUMAN (SWALL:P16930) (419 aa) fasta scores: E(): 2.1e-99, 57.17% id in 411 aa; hydrolase complement(3279418..3280725) Burkholderia pseudomallei K96243 3093948 YP_109335.1 CDS hmgA NC_006350.1 3280722 3282074 R An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase complement(3280722..3282074) Burkholderia pseudomallei K96243 3092129 YP_109336.1 CDS pcaK NC_006350.1 3282075 3283430 R Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 3.4e-57, 38.87% id in 445 aa, and to Acinetobacter calcoaceticus 4-hydroxybenzoate transporter pcaK SWALL:PCAK_ACICA (SWALL:Q43975) (457 aa) fasta scores: E(): 2.7e-49, 35.08% id in 439 aa; 4-hydroxybenzoate transporter complement(3282075..3283430) Burkholderia pseudomallei K96243 3093467 YP_109337.1 CDS BPSL2741 NC_006350.1 3283427 3283657 R Similar to Ralstonia solanacearum hypothetical protein rsp0701 rsp0701 or rs01748 SWALL:Q8XRY0 (EMBL:AL646080) (68 aa) fasta scores: E(): 3.1e-10, 55.4% id in 74 aa; hypothetical protein complement(3283427..3283657) Burkholderia pseudomallei K96243 3093949 YP_109338.1 CDS BPSL2742 NC_006350.1 3283700 3285361 R Similar to many oxidoreductases including: Ralstonia solanacearum hypothetical oxidoreductase rsp0702 or rs01747 SWALL:Q8XRX9 (EMBL:AL646080) (563 aa) fasta scores: E(): 7e-141, 68.89% id in 553 aa, and to Escherichia coli 3-(3-hydroxy-phenyl)propionate mhpa or b0347 SWALL:MHPA_ECOLI (SWALL:P77397) (554 aa) fasta scores: E(): 9.2e-22, 26.78% id in 519 aa; FAD-dependent oxidoreductase complement(3283700..3285361) Burkholderia pseudomallei K96243 3093208 YP_109339.1 CDS BPSL2743 NC_006350.1 3285381 3286337 R Similar to many including: Ralstonia solanacearum hypothetical protein rsp0703 or rs01746 SWALL:Q8XRX8 (EMBL:AL646080) (319 aa) fasta scores: E(): 2.2e-80, 66.56% id in 317 aa, and to Streptomyces arenae cyclase ncnE SWALL:Q9X466 (EMBL:AF098966) (310 aa) fasta scores: E(): 3.7e-11, 28.8% id in 250 aa; oxidoreductase complement(3285381..3286337) Burkholderia pseudomallei K96243 3093209 YP_109340.1 CDS BPSL2744 NC_006350.1 3286594 3287400 D Similar to Ralstonia solanacearum hypothetical protein rsc1343 or rs02865 SWALL:Q8XZQ2 (EMBL:AL646064) (301 aa) fasta scores: E(): 8.6e-14, 30.76% id in 247 aa; hypothetical protein 3286594..3287400 Burkholderia pseudomallei K96243 3093793 YP_109341.1 CDS BPSL2745 NC_006350.1 3287868 3288323 R Similar to many proteins of undefined function including: Pseudomonas aeruginosa hypothetical protein Pa5465 SWALL:Q9HTA5 (EMBL:AE004959) (139 aa) fasta scores: E(): 1e-18, 40.62% id in 128 aa and to Rhizobium meliloti hypothetical protein r01113 r01113 or smc02549 SWALL:Q92R18 (EMBL:AL591786) (159 aa) fasta scores: E(): 6.2e-18, 41.73% id in 127 aa. Note the alternative possible translational start site at codon 17; hypothetical protein complement(3287868..3288323) Burkholderia pseudomallei K96243 3093794 YP_109342.1 CDS BPSL2746 NC_006350.1 3288720 3289544 R Similar to many regulators including: Escherichia coli acetate operon repressor IclR or b4018 SWALL:ICLR_ECOLI (SWALL:P16528) (274 aa) fasta scores: E(): 5.8e-09, 28.13% id in 231 aa and to Ralstonia solanacearum transcription regulator protein rsc0757 or rs05096 SWALL:Q8Y1D3 (EMBL:AL646060) (273 aa) fasta scores: E(): 3.7e-42, 52.59% id in 251 aa; IclR family transcriptional regulator complement(3288720..3289544) Burkholderia pseudomallei K96243 3092521 YP_109343.1 CDS BPSL2747 NC_006350.1 3289534 3290775 D Similar to Prokaryotic and Eukaryotic dehydrogenases including: Rhizobium meliloti glutaryl-CoA dehydrogenase rb0847 or smb21181 SWALL:Q92V67 (EMBL:AL603645) (395 aa) fasta scores: E(): 7.9e-118, 72.98% id in 396 aa and to Homo sapiens glutaryl-CoA dehydrogenase, mitochondrial precursor GcdH SWALL:GCDH_HUMAN (SWALL:Q92947) (438 aa) fasta scores: E(): 1.9e-100, 64.6% id in 404 aa; glutaryl-CoA dehydrogenase 3289534..3290775 Burkholderia pseudomallei K96243 3092522 YP_109344.1 CDS BPSL2748 NC_006350.1 3291026 3291664 R Similar to Ralstonia solanacearum probable antioxidant rsc0754 or rs05099 SWALL:Q8Y1D6 (EMBL:AL646060) (212 aa) fasta scores: E(): 1.5e-73, 87.26% id in 212 aa, and to Pseudomonas putida thiol-specific antioxidant protein lsfA SWALL:BAC00970 (EMBL:AB086390) (212 aa) fasta scores: E(): 2.7e-71, 82.54% id in 212 aa; oxidoreductase complement(3291026..3291664) Burkholderia pseudomallei K96243 3091891 YP_109345.1 CDS BPSL2749 NC_006350.1 3291992 3292294 D Similar to several including: Ralstonia solanacearum probable transmembrane protein rsc0753 or rs05100 SWALL:Q8Y1D7 (EMBL:AL646060) (108 aa) fasta scores: E(): 1e-21, 70.1% id in 97 aa and Pseudomonas aeruginosa hypothetical protein Pa3040 pa3040 SWALL:Q9HZG8 (EMBL:AE004729) (109 aa) fasta scores: E(): 1.6e-09, 43.43% id in 99 aa; hypothetical protein 3291992..3292294 Burkholderia pseudomallei K96243 3091892 YP_109346.1 CDS BPSL2750 NC_006350.1 3292418 3292807 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0752 or rs05101 SWALL:Q8Y1D8 (EMBL:AL646060) (125 aa) fasta scores: E(): 6.6e-25, 62.5% id in 112 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3041 SWALL:Q9HZG7 (EMBL:AE004729) (126 aa) fasta scores: E(): 1.6e-10, 38.52% id in 122 aa; hypothetical protein 3292418..3292807 Burkholderia pseudomallei K96243 3094765 YP_109347.1 CDS BPSL2751 NC_006350.1 3292857 3293315 D hypothetical protein 3292857..3293315 Burkholderia pseudomallei K96243 3094766 YP_109348.1 CDS BPSL2752 NC_006350.1 3293420 3293872 R Similar to Bacteroides nodosus fimbrial protein precursor FimA SWALL:FMAI_BACNO (SWALL:P17827) (161 aa) fasta scores: E(): 0.00043, 29.45% id in 129 aa, and to Xylella fastidiosa pilE protein xf0033 SWALL:Q9PHB1 (EMBL:AE003857) (139 aa) fasta scores: E(): 2.9e-07, 35.87% id in 131 aa; fimbrial protein complement(3293420..3293872) Burkholderia pseudomallei K96243 3093952 YP_109349.1 CDS BPSL2753 NC_006350.1 3293892 3294488 R hypothetical protein complement(3293892..3294488) Burkholderia pseudomallei K96243 3093953 YP_109350.1 CDS BPSL2754 NC_006350.1 3294488 3295273 R Weakly similar to Ralstonia solanacearum probable transmembrane protein rsc0726 or rs05127 SWALL:Q8Y1G4 (EMBL:AL646060) (328 aa) fasta scores: E(): 0.0054, 32.7% id in 263 aa, and to Xylella fastidiosa hypothetical protein xf0030 SWALL:Q9PHB4 (EMBL:AE003857) (316 aa) fasta scores: E(): 0.068, 25.17% id in 282 aa; hypothetical protein complement(3294488..3295273) Burkholderia pseudomallei K96243 3091711 YP_109351.1 CDS BPSL2755 NC_006350.1 3295270 3295695 R hypothetical protein complement(3295270..3295695) Burkholderia pseudomallei K96243 3091712 YP_109352.1 CDS BPSL2756 NC_006350.1 3295677 3296237 R Similar to Xanthomonas campestris pre-pilin like leader sequence FimT or xcc2495 SWALL:AAM41769 (EMBL:AE012361) (171 aa) fasta scores: E(): 6.6e-05, 30.76% id in 169 aa; hypothetical protein complement(3295677..3296237) Burkholderia pseudomallei K96243 3094396 YP_109353.1 CDS nrdR NC_006350.1 3296423 3296902 R Similar to Ralstonia solanacearum hypothetical protein rsc0728 or rs05125 SWALL:Q8Y1G2 (EMBL:AL646060) (149 aa) fasta scores: E(): 6.9e-38, 65.1% id in 149 aa, and to Xanthomonas axonopodis hypothetical protein Xac0744 SWALL:AAM35633 (EMBL:AE011704) (174 aa) fasta scores: E(): 4.4e-32, 59.21% id in 152 aa, and to Xanthomonas campestris hypothetical protein Xcc0691 SWALL:AAM40007 (EMBL:AE012168) (174 aa) fasta scores: E(): 8e-32, 58.55% id in 152 aa; transcriptional regulator NrdR complement(3296423..3296902) Burkholderia pseudomallei K96243 3094397 YP_109354.1 CDS glyA NC_006350.1 3296909 3298156 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(3296909..3298156) Burkholderia pseudomallei K96243 3094757 YP_109355.1 CDS BPSL2759 NC_006350.1 3298608 3299354 D Similar to Streptomyces clavuligerus clavaldehyde dehydrogenase Cad SWALL:Q9LCV7 (EMBL:U87786) (247 aa) fasta scores: E(): 1.1e-22, 36.66% id in 240 aa, and to Ralstonia solanacearum probable oxidoreductase rsc0730 or rs05123 SWALL:Q8Y1G0 (EMBL:AL646060) (262 aa) fasta scores: E(): 9.5e-65, 69.23% id in 247 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical oxidoreductase YdfG or stm1511 or sty1550 SWALL:YDFG_SALTY (SWALL:P40864) (248 aa) fasta scores: E(): 3.8e-64, 68.42% id in 247 aa; short-chain dehydrogenase 3298608..3299354 Burkholderia pseudomallei K96243 3091464 YP_109356.1 CDS BPSL2760 NC_006350.1 3299451 3299945 D Similar to Ralstonia solanacearum thioesterase rsc0731 or rs05122 SWALL:Q8Y1F9 (EMBL:AL646060) (134 aa) fasta scores: E(): 2.1e-35, 66.4% id in 128 aa, and to Xanthomonas campestris hypothetical protein Xcc3022 SWALL:AAM42293 (EMBL:AE012415) (152 aa) fasta scores: E(): 4.1e-22, 47.01% id in 134 aa, and to Xanthomonas axonopodis hypothetical protein Xac3146 SWALL:AAM37990 (EMBL:AE011958) (152 aa) fasta scores: E(): 6.6e-22, 45.65% id in 138 aa; thioesterase 3299451..3299945 Burkholderia pseudomallei K96243 3091465 YP_109357.1 CDS tolQ NC_006350.1 3300011 3300799 D Similar to Pseudomonas aeruginosa protein TolQ or pa0969 SWALL:TOLQ_PSEAE (SWALL:P50598) (231 aa) fasta scores: E(): 4.9e-40, 52.23% id in 224 aa, and to Ralstonia solanacearum probable tolq-related transport transmembrane protein TolQ or rsc0732 or rs05121 SWALL:Q8Y1F8 (EMBL:AL646060) (230 aa) fasta scores: E(): 3.5e-65, 77.09% id in 227 aa; possible alternative start site at codon 38; TolQ transport transmembrane protein 3300011..3300799 Burkholderia pseudomallei K96243 3093135 YP_109358.1 CDS tolR NC_006350.1 3300810 3301259 D Similar to Pseudomonas aeruginosa protein TolR or pa0970 SWALL:TOLR_PSEAE (SWALL:P50599) (146 aa) fasta scores: E(): 3.7e-11, 38.4% id in 138 aa, and to Ralstonia solanacearum tolr-related transport transmembrane protein TolR or rsc0733 or rs05120 SWALL:Q8Y1F7 (EMBL:AL646060) (144 aa) fasta scores: E(): 1.4e-28, 63.3% id in 139 aa, and to Xanthomonas axonopodis TolR protein tolr or xac3144 SWALL:AAM37988 (EMBL:AE011958) (149 aa) fasta scores: E(): 4.4e-12, 43.38% id in 136 aa; possible alternative start site at codon 10; TolR-like protein 3300810..3301259 Burkholderia pseudomallei K96243 3092856 YP_109359.1 CDS tolA NC_006350.1 3301256 3302281 D Similar to Pseudomonas aeruginosa TolA protein TolA or pa0971 SWALL:TOLA_PSEAE (SWALL:P50600) (347 aa) fasta scores: E(): 0.00074, 30.72% id in 319 aa, and to Ralstonia solanacearum probable TolA-related transport transmembrane protein TolA or rsc0734 or rs05119 SWALL:Q8Y1F6 (EMBL:AL646060) (345 aa) fasta scores: E(): 1.1e-22, 45.56% id in 338 aa, and to Xanthomonas campestris TolA protein TolA or xcc3019 SWALL:Q8P6F1 (EMBL:AE012415) (345 aa) fasta scores: E(): 1.4e-05, 26.95% id in 345 aa; TolA-related transport transmembrane protein 3301256..3302281 Burkholderia pseudomallei K96243 3094704 YP_109360.1 CDS tolB NC_006350.1 3302378 3303679 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3302378..3303679 Burkholderia pseudomallei K96243 3093134 YP_109361.1 CDS BPSL2765 NC_006350.1 3303697 3304209 D Similar to Pseudomonas putida peptidoglycan-associated lipoprotein precursor Pal or Pal1 SWALL:PAL_PSEPU (SWALL:P43036) (166 aa) fasta scores: E(): 2.8e-17, 44.02% id in 159 aa, and to Ralstonia solanacearum probable peptidoglycan-associated lipoprotein precursor Pal or rsc0736 or rs05117 SWALL:Q8Y1F4 (EMBL:AL646060) (172 aa) fasta scores: E(): 5.7e-37, 68.07% id in 166 aa, and to Xylella fastidiosa outer membrane protein p6 precursor xf1896 SWALL:Q9PC85 (EMBL:AE004009) (186 aa) fasta scores: E(): 2.7e-18, 39.2% id in 176 aa; OmpA family lipoprotein 3303697..3304209 Burkholderia pseudomallei K96243 3094378 YP_109362.1 CDS BPSL2766 NC_006350.1 3304229 3304978 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0737 or rs05116 SWALL:Q8Y1F3 (EMBL:AL646060) (274 aa) fasta scores: E(): 5.9e-45, 53.3% id in 242 aa, and to Xanthomonas campestris hypothetical protein Xcc3016 SWALL:AAM42287 (EMBL:AE012414) (272 aa) fasta scores: E(): 5.5e-14, 32.84% id in 274 aa, and to Xanthomonas axonopodis hypothetical protein Xac3140 SWALL:AAM37984 (EMBL:AE011958) (272 aa) fasta scores: E(): 9.5e-14, 33.57% id in 274 aa; hypothetical protein 3304229..3304978 Burkholderia pseudomallei K96243 3094379 YP_109363.1 CDS BPSL2768 NC_006350.1 3306246 3306473 R hypothetical protein complement(3306246..3306473) Burkholderia pseudomallei K96243 3094216 YP_109364.1 CDS BPSL2769 NC_006350.1 3306699 3307583 D Similar to Xanthomonas campestris UDP-glucose pyrophosphorylase SWALL:P74969 (EMBL:U65532) (324 aa) fasta scores: E(): 5.2e-57, 57.72% id in 272 aa, and to previously sequenced Burkholderia pseudomallei UTP-glucose-1-phosphate uridylyltransferase SWALL:Q9F5N4 (EMBL:AF312223) (295 aa) fasta scores: E(): 9.6e-91, 78.15% id in 293 aa, and to Ralstonia solanacearum probable UTP-glucose-1-phosphate uridylyltransferase GalU1 or rsc2237 or rs01362 SWALL:Q8XX79 (EMBL:AL646069) (289 aa) fasta scores: E(): 2.3e-90, 77.16% id in 289 aa; UTP-glucose-1-phosphate uridylyltransferase 3306699..3307583 Burkholderia pseudomallei K96243 3094217 YP_109365.1 CDS BPSL2770 NC_006350.1 3307838 3308833 R Similar to Escherichia coli polysialic acid capsule expression protein KpsF SWALL:KSF5_ECOLI (SWALL:Q47334) (327 aa) fasta scores: E(): 3.5e-43, 43.61% id in 321 aa, and to Haemophilus influenzae hypothetical protein HI1678 SWALL:YRBH_HAEIN (SWALL:P45313) (337 aa) fasta scores: E(): 3e-51, 49.68% id in 320 aa; capsule expression protein complement(3307838..3308833) Burkholderia pseudomallei K96243 3094235 YP_109366.1 CDS BPSL2771 NC_006350.1 3308877 3309428 R Similar to Ralstonia solanacearum hypothetical protein rsc0412 or rs03380 SWALL:Q8Y2C4 (EMBL:AL646059) (195 aa) fasta scores: E(): 5.2e-21, 46.34% id in 164 aa, and to Neisseria meningitidis hypothetical protein Nmb0353 SWALL:Q9K137 (EMBL:AE002392) (178 aa) fasta scores: E(): 2.3e-19, 39.24% id in 158 aa, and to Neisseria meningitidis hypothetical protein Nma2134 SWALL:Q9JSU3 (EMBL:AL162758) (178 aa) fasta scores: E(): 2.7e-19, 39.24% id in 158 aa; haloacid dehalogenase-like hydrolase complement(3308877..3309428) Burkholderia pseudomallei K96243 3094236 YP_109367.1 CDS kdsA NC_006350.1 3309425 3310270 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(3309425..3310270) Burkholderia pseudomallei K96243 3093882 YP_109368.1 CDS BPSL2773 NC_006350.1 3310355 3311515 R Similar to Klebsiella pneumoniae glycosyltransferase in cps region SWALL:YC07_KLEPN (SWALL:Q48453) (358 aa) fasta scores: E(): 2e-08, 26.48% id in 370 aa, and to Lactobacillus delbrueckii glycosyltransferase EpsF SWALL:Q9F0C2 (EMBL:AF267127) (366 aa) fasta scores: E(): 9e-28, 30.63% id in 346 aa, and to Escherichia coli galactosyltransferase WbgM SWALL:Q8VQ50 (EMBL:AF461121) (364 aa) fasta scores: E(): 1.7e-12, 27.36% id in 296 aa; possible alternative start site at codon 27; glycosyltransferase complement(3310355..3311515) Burkholderia pseudomallei K96243 3091440 YP_109369.1 CDS BPSL2774 NC_006350.1 3311512 3312456 R hypothetical protein complement(3311512..3312456) Burkholderia pseudomallei K96243 3091441 YP_109370.1 CDS BPSL2775 NC_006350.1 3312453 3312989 R Similar to Escherichia coli, and Escherichia coli O157:H7 colanic acid biosynthesis acetyltransferase WcaB or b2058 or z3222 or ecs2863 SWALL:WCAB_ECOLI (SWALL:P77558) (162 aa) fasta scores: E(): 4.6e-15, 38.36% id in 159 aa, and to Salmonella typhimurium acetyl transferase WcaB or stm2114 SWALL:Q9F7A9 (EMBL:AF285084) (162 aa) fasta scores: E(): 7.4e-16, 40% id in 160 aa, and to Salmonella typhi acetyltransferase sty2327 SWALL:Q8Z5G7 (EMBL:AL627273) (162 aa) fasta scores: E(): 1.2e-15, 40% id in 160 aa; colanic acid biosynthesis acetyltransferase complement(3312453..3312989) Burkholderia pseudomallei K96243 3092188 YP_109371.1 CDS BPSL2776 NC_006350.1 3312991 3314187 R No significant database matches to the full length CDS. Internal region is similar to an internal region of Escherichia coli capsule polysaccharide export protein KpsS SWALL:KSS5_ECOLI (SWALL:P42218) (389 aa) fasta scores: E(): 0.0021, 29.75% id in 242 aa; Similar to Rhizobium sp. protein FixF or y4gK from codon 220 to 395 SWALL:FIXF_RHISN (SWALL:P55467) (402 aa) fasta scores: E(): 7.6e-06, 39.28% id in 112 aa; hypothetical protein complement(3312991..3314187) Burkholderia pseudomallei K96243 3092189 YP_109372.1 CDS BPSL2777 NC_006350.1 3314220 3315494 R Similar to Pseudomonas aeruginosa O-antigen translocase Orf_11 SWALL:AAM27663 (EMBL:AF498408) (411 aa) fasta scores: E(): 2.5e-13, 24.69% id in 413 aa, and to Pseudomonas aeruginosa protein WbpF or Wzx or pa3153 SWALL:P72137 (EMBL:U50396) (411 aa) fasta scores: E(): 4.4e-13, 24.69% id in 413 aa, and to Rhizobium loti O-antigen translocase homolog mlr9725 SWALL:Q98NV4 (EMBL:AP003017) (449 aa) fasta scores: E(): 1.7e-11, 27.57% id in 417 aa; O-antigen translocase complement(3314220..3315494) Burkholderia pseudomallei K96243 3093783 YP_109373.1 CDS BPSL2778 NC_006350.1 3315555 3317795 R Similar to Acinetobacter johnsonii tyrosine-protein kinase Ptk SWALL:PTK_ACIJO (SWALL:O52788) (733 aa) fasta scores: E(): 1.3e-70, 34.27% id in 741 aa, and to Ralstonia solanacearum tyrosine-protein kinase EpsB SWALL:EPB2_RALSO (SWALL:Q45409) (750 aa) fasta scores: E(): 1.4e-132, 53.65% id in 738 aa, and to Ralstonia solanacearum tyrosine-protein kinase EpsB or rsp1018 or rs02356 SWALL:EPB1_RALSO (SWALL:P58593) (751 aa) fasta scores: E(): 1.4e-132, 53.77% id in 742 aa; tyrosine-protein kinase involved in EPS biosynthesis complement(3315555..3317795) Burkholderia pseudomallei K96243 3093784 YP_109374.1 CDS BPSL2779 NC_006350.1 3317837 3318271 R Similar to Acinetobacter johnsonii low molecular weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO (SWALL:O52787) (142 aa) fasta scores: E(): 2.5e-16, 36.69% id in 139 aa, and to Ralstonia solanacearum probable low molecular weight protein-tyrosine-phosphatase EpsP or rsp1019 or rs02353 SWALL:EPP1_RALSO (SWALL:P58596) (145 aa) fasta scores: E(): 1.6e-25, 50.7% id in 142 aa, and to Ralstonia solanacearum probable low molecular weight protein-tyrosine-phosphatase EpsP SWALL:EPP2_RALSO (SWALL:Q45408) (145 aa) fasta scores: E(): 1.6e-25, 51.4% id in 142 aa. Note: may be involved in EPS biosynthesis; protein-tyrosine-phosphatase complement(3317837..3318271) Burkholderia pseudomallei K96243 3094032 YP_109375.1 CDS BPSL2780 NC_006350.1 3318268 3319470 R Similar to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fasta scores: E(): 1.4e-34, 40.98% id in 305 aa, and to Ralstonia solanacearum EPS I polysaccharide export outer membrane protein EpsA precursor SWALL:EPA2_RALSO (SWALL:Q45407) (377 aa) fasta scores: E(): 9.2e-49, 42.59% id in 385 aa, and to Ralstonia solanacearum EPS I polysaccharide export outer membrane protein EpsA precursor or rsp1020 or rs02354 SWALL:EPA1_RALSO (SWALL:P58597) (381 aa) fasta scores: E(): 3.1e-48, 43.04% id in 388 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site; capsular polysaccharide transport protein complement(3318268..3319470) Burkholderia pseudomallei K96243 3094033 YP_109376.1 CDS BPSL2781 NC_006350.1 3319533 3320654 R Similar to Erwinia amylovora UDP-galactose-lipid carrier transferase AmsG SWALL:AMSG_ERWAM (SWALL:Q46628) (477 aa) fasta scores: E(): 1e-49, 62.21% id in 217 aa, and to Erwinia pyrifoliae sugar transferase CpsG from codon 162 to 374 SWALL:Q8VVI1 (EMBL:AJ300463) (477 aa) fasta scores: E(): 3e-50, 62.67% id in 217 aa, and to Erwinia stewartii undecaprenyl-phosphate galactose phosphotransferase homolog CpsA from codon 175 to 374 SWALL:O85804 (EMBL:AF077292) (476 aa) fasta scores: E(): 6.4e-50, 66% id in 200 aa; transmembrane sugar transferase complement(3319533..3320654) Burkholderia pseudomallei K96243 3092831 YP_109377.1 CDS BPSL2782 NC_006350.1 3320835 3321881 R Similar to Mycobacterium smegmatis AdpA-like protein SWALL:Q9KX52 (EMBL:U20115) (308 aa) fasta scores: E(): 1.3e-11, 31.08% id in 222 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc3367 SWALL:Q9A339 (EMBL:AE005998) (324 aa) fasta scores: E(): 3.9e-09, 29.81% id in 322 aa, and to Streptomyces coelicolor transcriptional regulator sco2329 or scc53.20C SWALL:Q9KXJ1 (EMBL:AL357591) (320 aa) fasta scores: E(): 4.5e-09, 29.44% id in 326 aa; AraC family transcriptional regulator complement(3320835..3321881) Burkholderia pseudomallei K96243 3092832 YP_109378.1 CDS BPSL2783 NC_006350.1 3322670 3323242 D Similar to Klebsiella pneumoniae hypothetical protein in cps region SWALL:YC02_KLEPN (SWALL:Q48448) (209 aa) fasta scores: E(): 1.7e-10, 31.86% id in 182 aa, and to Ralstonia solanacearum probable transmembrane protein rsp1005 or rs02338 SWALL:Q8XR56 (EMBL:AL646082) (223 aa) fasta scores: E(): 3.1e-10, 34.4% id in 186 aa, and to Aeromonas hydrophila hypothetical 28.2 kDa protein SWALL:Q9X647 (EMBL:AF131869) (264 aa) fasta scores: E(): 5.5e-10, 37.68% id in 207 aa; hypothetical protein 3322670..3323242 Burkholderia pseudomallei K96243 3093509 YP_109379.1 CDS BPSL2784 NC_006350.1 3323439 3324797 D No significant database matches. Possible alternative translational start site; hypothetical protein 3323439..3324797 Burkholderia pseudomallei K96243 3093510 YP_109380.1 CDS BPSL2785 NC_006350.1 3324839 3326011 D hypothetical protein 3324839..3326011 Burkholderia pseudomallei K96243 3093327 YP_109381.1 CDS BPSL2786 NC_006350.1 3326472 3327170 R acetyltransferase complement(3326472..3327170) Burkholderia pseudomallei K96243 3093328 YP_109382.1 CDS wcbT NC_006350.1 3327179 3328498 R Similar to Escherichia coli, and Escherichia coli O157:H7 from codon 59 2-amino-3-ketobutyrate coenzyme A ligase Kbl or b3617 or z5044 or ecs4495 SWALL:KBL_ECOLI (SWALL:P07912) (398 aa) fasta scores: E(): 3.4e-37, 35.59% id in 354 aa. Identical to Burkholderia mallei acyl-CoA transferase WcbT SWALL:Q9AI28 (EMBL:AF285636) (439 aa) fasta scores: E(): 1e-164, 100% id in 439 aa; acyl-CoA transferase complement(3327179..3328498) Burkholderia pseudomallei K96243 3091459 YP_109383.1 CDS wcbS NC_006350.1 3328563 3329480 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3328563..3329480) Burkholderia pseudomallei K96243 3091458 YP_109384.1 CDS wcbR NC_006350.1 3329477 3337117 R Similar to previously sequenced Burkholderia mallei type I polyketide synthase WcbR SWALL:Q9AI30 (EMBL:AF285636) (2546 aa) fasta scores: E(): 0, 99.64% id in 2546 aa, and to Rhizobium meliloti fatty acid synthase transmembrane protein RkpA or r00577 or smc02273 SWALL:Q92S51 (EMBL:AL591784) (2504 aa) fasta scores: E(): 1e-168, 36.88% id in 2592 aa, and to Stigmatella aurantiaca StiG protein SWALL:Q8RJY0 (EMBL:AJ421825) (1398 aa) fasta scores: E(): 7.7e-134, 39.09% id in 1279 aa; capsular polysaccharide biosynthesis fatty acid synthase complement(3329477..3337117) Burkholderia pseudomallei K96243 3092850 YP_109385.1 CDS wcbQ NC_006350.1 3337120 3338652 R Similar to Rhizobium meliloti capsular polysaccharide biosynthesis protein from codon 21 RkpI or r00574 or smc02270 SWALL:RKPI_RHIME (SWALL:Q52938) (538 aa) fasta scores: E(): 1.8e-15, 30% id in 470 aa, and to Burkholderia mallei capsular polysaccharide biosynthesis protein WcbQ SWALL:Q9AI31 (EMBL:AF285636) (511 aa) fasta scores: E(): 2.9e-197, 95.89% id in 511 aa, and to Agrobacterium tumefaciens hypothetical protein atu1658 or agr_c_3053 SWALL:Q8UEU6 (EMBL:AE009122) (646 aa) fasta scores: E(): 2.4e-20, 27.36% id in 486 aa; capsular polysaccharide biosynthesis transmembrane protein complement(3337120..3338652) Burkholderia pseudomallei K96243 3092101 YP_109386.1 CDS wcbP NC_006350.1 3338654 3339442 R Similar to Burkholderia mallei dehydrogenase/reductase WcbP SWALL:Q9AI32 (EMBL:AF285636) (262 aa) fasta scores: E(): 1.1e-97, 99.23% id in 262 aa, and to Dictyostelium discoideum oxidoreductase SWALL:AAM43748 (EMBL:AC116989) (342 aa) fasta scores: E(): 7.9e-24, 36.4% id in 250 aa, and to Dictyostelium discoideum hypothetical protein SWALL:AAM43743 (EMBL:AC116989) (344 aa) fasta scores: E(): 9.2e-24, 36.26% id in 262 aa; capsular polysaccharide biosynthesis dehydrogenase/reductase complement(3338654..3339442) Burkholderia pseudomallei K96243 3092100 YP_109387.1 CDS wcbO NC_006350.1 3339439 3340641 R Similar to Escherichia coli capsule polysaccharide export protein KpsS SWALL:KSS5_ECOLI (SWALL:P42218) (389 aa) fasta scores: E(): 2.7e-47, 37.46% id in 379 aa, and to Burkholderia mallei capsule polysaccharide biosynthesis/export protein WcbO SWALL:Q9AI33 (EMBL:AF285636) (400 aa) fasta scores: E(): 1.3e-171, 99.75% id in 400 aa, and to Rhizobium meliloti capsular polysaccharide biosynthesis/export protein RkpJ or r00573 or smc02269 SWALL:Q92S54 (EMBL:AL591784) (441 aa) fasta scores: E(): 1.5e-48, 36.77% id in 397 aa; capsule polysaccharide biosynthesis/export protein complement(3339439..3340641) Burkholderia pseudomallei K96243 3092365 YP_109388.1 CDS wcbN NC_006350.1 3340908 3341477 R Similar to Aneurinibacillus thermoaerophilus D-glycero-d-manno-heptose 1,7-bisphosphate phosphatase GmhC SWALL:Q9AGY5 (EMBL:AF324836) (179 aa) fasta scores: E(): 3.6e-35, 60% id in 155 aa. Identical to Burkholderia mallei WcbN protein SWALL:Q9AI34 (EMBL:AF285636) (189 aa) fasta scores: E(): 9.5e-78, 100% id in 189 aa; D-glycero-d-manno-heptose 1,7-bisphosphate phosphatase complement(3340908..3341477) Burkholderia pseudomallei K96243 3091825 YP_109389.1 CDS wcbM NC_006350.1 3341474 3342166 R Similar to Aneurinibacillus thermoaerophilus D-glycero-d-manno-heptose 1-phosphate guanosyltransferase GmhD SWALL:Q9AGY6 (EMBL:AF324836) (230 aa) fasta scores: E(): 4.6e-29, 39.55% id in 225 aa. Previously sequenced Burkholderia pseudomallei capsular polysaccharide biosynthesis protein WcbM SWALL:Q93UJ1 (EMBL:AF228583) (230 aa) fasta scores: E(): 5e-89, 99.56% id in 230 aa; D-glycero-d-manno-heptose 1-phosphate guanosyltransferase complement(3341474..3342166) Burkholderia pseudomallei K96243 3091824 YP_109390.1 CDS gmhA NC_006350.1 3342168 3342761 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(3342168..3342761) Burkholderia pseudomallei K96243 3092932 YP_109391.1 CDS wcbL NC_006350.1 3342743 3343783 R Similar to Aneurinibacillus thermoaerophilus D-glycero-d-manno-heptose 7-phosphate kinase GmhB SWALL:Q9AGY8 (EMBL:AF324836) (341 aa) fasta scores: E(): 1.6e-79, 55.84% id in 342 aa. Previously sequenced Burkholderia pseudomallei sugar kinase WcbL SWALL:Q93UJ3 (EMBL:AF228583) (346 aa) fasta scores: E(): 5.3e-139, 100% id in 346 aa; sugar kinase complement(3342743..3343783) Burkholderia pseudomallei K96243 3092914 YP_109392.1 CDS wcbK NC_006350.1 3343799 3344812 R Similar to Aneurinibacillus thermoaerophilus GDP-6-deoxy-D-lyxo-4-hexulose reductase Rmd SWALL:Q9EYP5 (EMBL:AF317224) (309 aa) fasta scores: E(): 4.3e-31, 35.4% id in 322 aa. Identical to Burkholderia mallei GDP epimerase/dehydratase WcbK SWALL:Q9AI38 (EMBL:AF285636) (337 aa) fasta scores: E(): 1.2e-132, 100% id in 337 aa; GDP sugar epimerase/dehydratase complement(3343799..3344812) Burkholderia pseudomallei K96243 3094198 YP_109393.1 CDS wcbJ NC_006350.1 3344822 3345664 R Similar to Azorhizobium caulinodans capsular polysaccharide biosynthesis protein Oac2 SWALL:Q06936 (EMBL:Z22611) (296 aa) fasta scores: E(): 1.7e-06, 27.13% id in 199 aa. Identical to Burkholderia mallei capsular polysaccharide biosynthesis protein WcbJ SWALL:Q9AI39 (EMBL:AF285636) (280 aa) fasta scores: E(): 1.2e-109, 100% id in 280 aa; capsular polysaccharide biosynthesis protein complement(3344822..3345664) Burkholderia pseudomallei K96243 3094197 YP_109394.1 CDS wcbI NC_006350.1 3345661 3346599 R Similar to Burkholderia mallei capsular polysaccharide biosynthesis protein WcbI SWALL:Q9AI40 (EMBL:AF285636) (311 aa) fasta scores: E(): 1.4e-128, 99.67% id in 311 aa, and to previously sequenced Burkholderia pseudomallei capsular polysaccharide biosynthesis protein WcbI SWALL:Q93UJ4 (EMBL:AF228583) (395 aa) fasta scores: E(): 2.7e-128, 99.03% id in 312 aa; capsular polysaccharide biosynthesis protein complement(3345661..3346599) Burkholderia pseudomallei K96243 3091460 YP_109395.1 CDS wcbH NC_006350.1 3346614 3348410 R Similar to Caulobacter crescentus glycosyl transferase, group 1 family protein cc1003 or WbqX SWALL:Q9A9H7 (EMBL:AE005778) (434 aa) fasta scores: E(): 3e-10, 27.02% id in 433 aa. Previously sequenced Burkholderia pseudomallei glycosyltransferase WcbH SWALL:Q93UJ5 (EMBL:AF228583) (598 aa) fasta scores: E(): 0, 99.66% id in 598 aa; glycosyl transferase complement(3346614..3348410) Burkholderia pseudomallei K96243 3093854 YP_109396.1 CDS wcbG NC_006350.1 3348407 3349348 R Previously sequenced as Burkholderia pseudomallei capsular polysaccharide biosynthesis protein WcbG SWALL:Q93UJ6 (EMBL:AF228583) (313 aa) fasta scores: E(): 1e-116, 100% id in 313 aa. Highly similar to Burkholderia mallei capsular polysaccharide biosynthesis protein WcbG SWALL:Q9AI42 (EMBL:AF285636) (313 aa) fasta scores: E(): 9e-116, 99.04% id in 313 aa; capsular polysaccharide biosynthesis protein complement(3348407..3349348) Burkholderia pseudomallei K96243 3093853 YP_109397.1 CDS wcbF NC_006350.1 3349358 3350680 R Previously sequenced Burkholderia pseudomallei capsule polysaccharide biosynthesis protein WcbF SWALL:Q93UJ7 (EMBL:AF228583) (459 aa) fasta scores: E(): 8e-185, 100% id in 440 aa. Highly similar to Burkholderia mallei capsule polysaccharide biosynthesis protein WcbF SWALL:Q9AI43 (EMBL:AF285636) (440 aa) fasta scores: E(): 4e-184, 99.77% id in 440 aa; capsule polysaccharide biosynthesis protein complement(3349358..3350680) Burkholderia pseudomallei K96243 3093224 YP_109398.1 CDS wcbE NC_006350.1 3350703 3352226 R Similar to Pseudomonas aeruginosa glycosyltransferase WbpX or pa5449 SWALL:O84908 (EMBL:AF010181) (460 aa) fasta scores: E(): 1e-09, 34.83% id in 155 aa, and to previously sequenced Burkholderia pseudomallei glycosyltransferase WcbE SWALL:Q93UJ8 (EMBL:AF228583) (507 aa) fasta scores: E(): 1e-206, 99.8% id in 507 aa, and to Burkholderia mallei glycosyltransferase WcbE SWALL:Q9AI44 (EMBL:AF285636) (507 aa) fasta scores: E(): 7.2e-206, 99.8% id in 507 aa, and to Actinobacillus actinomycetemcomitans glycosyltransferase SWALL:Q9JRN4 (EMBL:AB046360) (390 aa) fasta scores: E(): 4.8e-10, 34.53% id in 139 aa; glycosyltransferase complement(3350703..3352226) Burkholderia pseudomallei K96243 3093223 YP_109399.1 CDS wzt2 NC_006350.1 3352259 3352915 R Similar to Haemophilus influenzae ATP-binding protein BexA SWALL:BEXA_HAEIN (SWALL:P10640) (217 aa) fasta scores: E(): 2.7e-42, 58.98% id in 217 aa. Highly similar to Burkholderia mallei ABC-2 transporter Wzt SWALL:Q9AI45 (EMBL:AF285636) (218 aa) fasta scores: E(): 5.1e-73, 100% id in 218 aa. Previously as sequenced Burkholderia pseudomallei ATP-binding protein Wzt2 SWALL:Q93UJ9 (EMBL:AF228583) (248 aa) fasta scores: E(): 3.3e-70, 99.05% id in 211 aa; ATP-binding ABC transporter capsular polysaccharide export protein complement(3352259..3352915) Burkholderia pseudomallei K96243 3093190 YP_109400.1 CDS wzm NC_006350.1 3352912 3353694 R Similar to Haemophilus influenzae capsule polysaccharide export inner-membrane protein BexB bexB SWALL:BXB2_HAEIN (SWALL:P19391) (265 aa) fasta scores: E(): 1.8e-44, 42.47% id in 259 aa. Identical to Burkholderia mallei ABC-2 transporter Wzm SWALL:Q9AI46 (EMBL:AF285636) (260 aa) fasta scores: E(): 6.2e-105, 100% id in 260 aa; capsular polysaccharide export ABC transporter transmembrane protein complement(3352912..3353694) Burkholderia pseudomallei K96243 3093941 YP_109401.1 CDS wcbD NC_006350.1 3353701 3354849 R Similar to Haemophilus influenzae capsule polysaccharide export inner-membrane protein BexC SWALL:BEXC_HAEIN (SWALL:P22930) (377 aa) fasta scores: E(): 7.1e-55, 41.99% id in 381 aa. Identical to Burkholderia mallei capsule polysaccharide export inner-membrane protein WcbD SWALL:Q9AI47 (EMBL:AF285636) (382 aa) fasta scores: E(): 3.7e-135, 100% id in 382 aa; capsule polysaccharide export ABC transporter transmembrane protein complement(3353701..3354849) Burkholderia pseudomallei K96243 3094162 YP_109402.1 CDS wcbC NC_006350.1 3355330 3356493 R Similar to Actinobacillus pleuropneumoniae capsular polysaccharide biosynthesis/export protein CpxD precursor SWALL:Q44132 (EMBL:U36397) (394 aa) fasta scores: E(): 6.4e-52, 41.19% id in 386 aa, Identical to Burkholderia mallei capsular polysaccharide biosynthesis/export protein WcbC SWALL:Q9AI48 (EMBL:AF285636) (387 aa) fasta scores: E(): 5.8e-141, 100% id in 387 aa; capsular polysaccharide biosynthesis/export protein complement(3355330..3356493) Burkholderia pseudomallei K96243 3093048 YP_109403.1 CDS wcbB NC_006350.1 3356674 3357825 D Similar to Pseudomonas aeruginosa glycosyltransferase WbpX or pa5449 SWALL:O84908 (EMBL:AF010181) (460 aa) fasta scores: E(): 2.3e-16, 33.33% id in 267 aa, and to previously sequenced Burkholderia pseudomallei glycosyltransferase WcbB SWALL:Q93UK1 (EMBL:AF228583) (365 aa) fasta scores: E(): 7e-147, 98.88% id in 357 aa, and to Burkholderia mallei glycosyltransferase WcbB SWALL:Q9AI49 (EMBL:AF285636) (280 aa) fasta scores: E(): 2.8e-116, 99.64% id in 280 aa, and to Burkholderia thailandensis glycosyltransferase WcbB SWALL:Q9AI57 (EMBL:AF285634) (280 aa) fasta scores: E(): 1.2e-84, 72.76% id in 279 aa; capsular polysaccharide glycosyltransferase biosynthesis protein 3356674..3357825 Burkholderia pseudomallei K96243 3093047 YP_109404.1 CDS wcbA NC_006350.1 3357826 3359841 D Similar to Escherichia coli capsule polysaccharide export protein KpsC SWALL:KSC5_ECOLI (SWALL:P42217) (675 aa) fasta scores: E(): 4.4e-65, 35.75% id in 674 aa, and to Burkholderia mallei capsular polysaccharide export protein WcbA SWALL:Q9AI50 (EMBL:AF285636) (671 aa) fasta scores: E(): 0, 99.85% id in 671 aa, and to previously sequenced Burkholderia pseudomallei capsular polysaccharide export protein WcbA SWALL:Q93UK2 (EMBL:AF228583) (671 aa) fasta scores: E(): 0, 99.4% id in 671 aa, and to Burkholderia thailandensis capsular polysaccharide export protein WcbA SWALL:Q9AI58 (EMBL:AF285634) (676 aa) fasta scores: E(): 6.5e-152, 60.12% id in 637 aa; capsule polysaccharide export protein 3357826..3359841 Burkholderia pseudomallei K96243 3093175 YP_109405.1 CDS manC NC_006350.1 3360240 3361667 D Similar to Escherichia coli GDP-mannose pyrophosphorylase ManC SWALL:Q9EXX9 (EMBL:AY012191) (479 aa) fasta scores: E(): 9.4e-105, 56.63% id in 475 aa. Previously sequenced Burkholderia pseudomallei ManC protein SWALL:Q93UK3 (EMBL:AF228583) (475 aa) fasta scores: E(): 5.3e-190, 100% id in 475 aa. Highly similar to Burkholderia mallei GDP-mannose pyrophosphorylase ManC SWALL:Q9AI51 (EMBL:AF285636) (475 aa) fasta scores: E(): 1.1e-189, 99.78% id in 475 aa, and to Burkholderia thailandensis GDP-mannose pyrophosphorylase ManC SWALL:Q9AI59 (EMBL:AF285634) (476 aa) fasta scores: E(): 1.1e-160, 82.7% id in 474 aa; GDP-mannose pyrophosphorylase 3360240..3361667 Burkholderia pseudomallei K96243 3093126 YP_109406.1 CDS BPSL2811 NC_006350.1 3361929 3362774 D Identical to Burkholderia mallei hypothetical protein YafJ SWALL:Q9AI52 (EMBL:AF285636) (278 aa) fasta scores: E(): 5e-119, 100% id in 278 aa. Similar to Streptomyces coelicolor hypothetical protein sco7508 or scbac17a6.41C SWALL:Q93J89 (EMBL:AL596248) (277 aa) fasta scores: E(): 4e-64, 55.63% id in 275 aa, and to Rhizobium meliloti hypothetical protein r00357 or smc01162 SWALL:Q92SL4 (EMBL:AL591783) (271 aa) fasta scores: E(): 1.3e-33, 41.85% id in 270 aa; hypothetical protein 3361929..3362774 Burkholderia pseudomallei K96243 3093359 YP_109407.1 CDS BPSL2812 NC_006350.1 3362840 3363712 D Identical to Burkholderia mallei hypothetical protein YggB SWALL:Q9AI53 (EMBL:AF285636) (290 aa) fasta scores: E(): 1.6e-105, 100% id in 290 aa. Previously sequenced Burkholderia pseudomallei hypothetical protein YggB SWALL:Q93UK4 (EMBL:AF228583) (271 aa) fasta scores: E(): 4e-91, 95.57% id in 271 aa; hypothetical protein 3362840..3363712 Burkholderia pseudomallei K96243 3093715 YP_109408.1 CDS BPSL2813 NC_006350.1 3364033 3364776 R Similar to Burkholderia mallei DedA family transmembrane protein SWALL:Q9AI54 (EMBL:AF285636) (226 aa) fasta scores: E(): 6.3e-85, 99.11% id in 226 aa, and to Ralstonia solanacearum probable DedA dsg-1 protein transmembrane DedA or rsc2559 or rs00742 SWALL:Q8XWB5 (EMBL:AL646070) (218 aa) fasta scores: E(): 5.6e-52, 63.42% id in 216 aa, and to Escherichia coli, and Escherichia coli O157:H7 DedA protein DedA or b2317 or z3579 or ecs3201 SWALL:DEDA_ECOLI (SWALL:P09548) (219 aa) fasta scores: E(): 1.2e-39, 47.98% id in 223 aa; possible alternative start site at codon 22; DedA family transmembrane protein complement(3364033..3364776) Burkholderia pseudomallei K96243 3093716 YP_109409.1 CDS mutL NC_006350.1 3364898 3366952 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 3364898..3366952 Burkholderia pseudomallei K96243 3094395 YP_109410.1 CDS miaA NC_006350.1 3366949 3367923 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 3366949..3367923 Burkholderia pseudomallei K96243 3091722 YP_109411.1 CDS BPSL2816 NC_006350.1 3367941 3368342 R Similar to Ralstonia solanacearum hypothetical protein rsc3100 or rs00553 SWALL:Q8XUT5 (EMBL:AL646073) (131 aa) fasta scores: E(): 2.2e-19, 50.38% id in 131 aa; hypothetical protein complement(3367941..3368342) Burkholderia pseudomallei K96243 3093777 YP_109412.1 CDS tnpA NC_006350.1 3368578 3369798 R Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 3.6e-138, 78.32% id in 406 aa, and to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.8e-162, 99.22% id in 386 aa. CDS is extended at the N-terminus in comparison to the B. mallei protein; transposase complement(3368578..3369798) Burkholderia pseudomallei K96243 3093020 YP_109413.1 CDS purM NC_006350.1 3369943 3370998 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(3369943..3370998) Burkholderia pseudomallei K96243 3092877 YP_109414.1 CDS BPSL2819 NC_006350.1 3371297 3372022 D Similar to Ralstonia solanacearum hypothetical protein rsc2625 or rs00929 SWALL:Q8XW50 (EMBL:AL646071) (233 aa) fasta scores: E(): 2.9e-43, 53.04% id in 230 aa, and to Neisseria meningitidis dnaA-related protein nmb1076 SWALL:Q9JZF5 (EMBL:AE002458) (222 aa) fasta scores: E(): 6.8e-22, 37.22% id in 231 aa, and to Neisseria meningitidis hypothetical protein Nma1279 SWALL:Q9JUJ9 (EMBL:AL162755) (243 aa) fasta scores: E(): 7.3e-22, 37.22% id in 231 aa; DnaA regulatory inactivator Hda 3371297..3372022 Burkholderia pseudomallei K96243 3093778 YP_109415.1 CDS BPSL2820 NC_006350.1 3372044 3372730 D Similar to Ralstonia solanacearum hydrolase rsc2626 or rs00930 SWALL:Q8XW49 (EMBL:AL646071) (224 aa) fasta scores: E(): 3.6e-62, 65.47% id in 223 aa, and to Neisseria meningitidis hypothetical protein Nmb1075 SWALL:Q9JZF6 (EMBL:AE002458) (222 aa) fasta scores: E(): 2.9e-40, 47.32% id in 224 aa, and to Neisseria meningitidis hypothetical protein Nma1278 SWALL:Q9JUK0 (EMBL:AL162755) (222 aa) fasta scores: E(): 4.6e-40, 46.87% id in 224 aa; hypothetical protein 3372044..3372730 Burkholderia pseudomallei K96243 3094665 YP_109416.1 CDS BPSL2821 NC_006350.1 3372727 3374274 D Similar to Pseudomonas putida polynucleotide adenylyltransferase PcnB SWALL:O87789 (EMBL:Y18131) (463 aa) fasta scores: E(): 2.9e-55, 49.01% id in 455 aa, and to Ralstonia solanacearum probable polynucleotide adenylyltransferase PcnB or rsc2627 or rs00931 SWALL:Q8XW48 (EMBL:AL646071) (514 aa) fasta scores: E(): 9.5e-115, 64.36% id in 522 aa, and to Pseudomonas aeruginosa poly(A) polymerase PcnB or pa4727 SWALL:Q9HV72 (EMBL:AE004886) (467 aa) fasta scores: E(): 5.2e-52, 47.13% id in 471 aa; polynucleotide adenylyltransferase 3372727..3374274 Burkholderia pseudomallei K96243 3094666 YP_109417.1 CDS BPSL2822 NC_006350.1 3374311 3374838 D Similar to Escherichia coli 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK or b0142 SWALL:HPPK_ECOLI (SWALL:P26281) (158 aa) fasta scores: E(): 1.7e-13, 39.35% id in 155 aa, and to Ralstonia solanacearum probable 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase FolK or rsc2628 or rs00932 SWALL:Q8XW47 (EMBL:AL646071) (169 aa) fasta scores: E(): 2e-41, 62.13% id in 169 aa, and to Bacillus halodurans 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK or bh0095 SWALL:Q9KGG7 (EMBL:AP001507) (174 aa) fasta scores: E(): 6.1e-19, 43.7% id in 135 aa; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3374311..3374838 Burkholderia pseudomallei K96243 3092703 YP_109418.1 CDS BPSL2823 NC_006350.1 3374835 3375518 D Similar to Lactobacillus acidophilus deoxyadenosine kinase SWALL:DGK1_LACAC (SWALL:Q59483) (214 aa) fasta scores: E(): 6.5e-08, 26.94% id in 193 aa, and to Ralstonia solanacearum deoxyguanosine kinase rsc2629 or rs00933 SWALL:Q8XW46 (EMBL:AL646071) (214 aa) fasta scores: E(): 6.4e-27, 47.29% id in 203 aa, and to uncultured proteobacterium EBAC31A08 predicted deoxypurine kinase SWALL:Q9F7R4 (EMBL:AF279106) (221 aa) fasta scores: E(): 1.5e-24, 42.92% id in 205 aa, and to Deinococcus radiodurans subunit dr0299 SWALL:Q9RXL1 (EMBL:AE001891) (205 aa) fasta scores: E(): 1.1e-18, 38.54% id in 192 aa; deoxyguanosine kinase/deoxyadenosine kinase 3374835..3375518 Burkholderia pseudomallei K96243 3092704 YP_109419.1 CDS panB NC_006350.1 3375583 3376398 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3375583..3376398 Burkholderia pseudomallei K96243 3093227 YP_109420.1 CDS BPSL2825 NC_006350.1 3376582 3378600 R Similar to Ralstonia solanacearum para-aminobenzoate synthetase component I protein PabB or rsc2633 or rs05772 SWALL:Q8XW42 (EMBL:AL646071) (626 aa) fasta scores: E(): 1.4e-57, 50.88% id in 676 aa, and to Neisseria meningitidis para-aminobenzoate synthetase component i/4-amino-4-deoxychorismate lyase, nmb1970 SWALL:Q9JXM6 (EMBL:AE002545) (593 aa) fasta scores: E(): 1e-42, 41.3% id in 661 aa, and to Neisseria meningitidis para-aminobenzoate synthase component I nma0477 SWALL:Q9JW99 (EMBL:AL162753) (598 aa) fasta scores: E(): 1.7e-42, 41.3% id in 661 aa, and to Rhizobium loti hypothetical protein Mlr3005 SWALL:Q98H70 (EMBL:AP003000) (381 aa) fasta scores: E(): 3.3e-30, 42.05% id in 321 aa; hypothetical protein complement(3376582..3378600) Burkholderia pseudomallei K96243 3091847 YP_109421.1 CDS dnaJ NC_006350.1 3378622 3379752 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ complement(3378622..3379752) Burkholderia pseudomallei K96243 3093637 YP_109422.1 CDS dnaK NC_006350.1 3380019 3381971 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(3380019..3381971) Burkholderia pseudomallei K96243 3093638 YP_109423.1 CDS BPSL2829 NC_006350.1 3382564 3383121 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(3382564..3383121) Burkholderia pseudomallei K96243 3093283 YP_109424.1 CDS hslR NC_006350.1 3383618 3384025 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 heat shock protein 15 HslR or b3400 or c4171 or z4754 or ecs4242 SWALL:HSLR_ECOLI (SWALL:P45802) (133 aa) fasta scores: E(): 6.8e-10, 34.84% id in 132 aa, and to Ralstonia solanacearum heat shock protein 15 HslR or rsc2642 or rs04574 SWALL:Q8XW33 (EMBL:AL646071) (131 aa) fasta scores: E(): 1.5e-28, 60.15% id in 128 aa, and to Neisseria meningitidis hypothetical protein (nma1348 or nmb1138) and nmb1176 SWALL:Q9JR17 (EMBL:AL162755) (133 aa) fasta scores: E(): 2.9e-16, 47.96% id in 123 aa; heat shock protein 15 complement(3383618..3384025) Burkholderia pseudomallei K96243 3092995 YP_109425.1 CDS hemH NC_006350.1 3384031 3385134 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(3384031..3385134) Burkholderia pseudomallei K96243 3093284 YP_109426.1 CDS hrcA NC_006350.1 3385307 3386329 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(3385307..3386329) Burkholderia pseudomallei K96243 3092424 YP_109427.1 CDS ppnK NC_006350.1 3386463 3387365 D catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase 3386463..3387365 Burkholderia pseudomallei K96243 3092425 YP_109428.1 CDS BPSL2834 NC_006350.1 3387395 3389044 D Similar to Escherichia coli DNA repair protein RecN or RadB or b2616 SWALL:RECN_ECOLI (SWALL:P05824) (553 aa) fasta scores: E(): 5.2e-71, 44.68% id in 555 aa, and to Ralstonia solanacearum probable DNA repair protein RecN or rsc2651 or rs04565 SWALL:Q8XW24 (EMBL:AL646071) (569 aa) fasta scores: E(): 3.3e-115, 64.9% id in 550 aa, and to Homo sapiens D-1 antigen SWALL:Q16490 (EMBL:S45570) (343 aa) from codon 67 to codon 410 fasta scores: E(): 4e-98, 86.29% id in 343 aa, and to Neisseria meningitidis DNA repair protein RecN or nma0952 SWALL:Q9JV87 (EMBL:AL162754) (557 aa) fasta scores: E(): 6.1e-74, 47% id in 551 aa; RecN DNA repair protein 3387395..3389044 Burkholderia pseudomallei K96243 3094553 YP_109429.1 CDS glnE NC_006350.1 3389443 3392226 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(3389443..3392226) Burkholderia pseudomallei K96243 3093737 YP_109430.1 CDS BPSL2836 NC_006350.1 3392387 3396580 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2657 or rs04554 SWALL:Q8XW18 (EMBL:AL646071) (1426 aa) fasta scores: E(): 8.9e-140, 35.4% id in 1401 aa, and to Xanthomonas campestris hypothetical protein Xcc2608 SWALL:Q8P7K3 (EMBL:AE012372) (1296 aa) fasta scores: E(): 1e-24, 25.29% id in 1423 aa, and to Xanthomonas axonopodis hypothetical protein Xac2769 SWALL:Q8PIX6 (EMBL:AE011917) (1306 aa) fasta scores: E(): 2.7e-24, 25.55% id in 1444 aa; hypothetical protein 3392387..3396580 Burkholderia pseudomallei K96243 3094554 YP_109431.1 CDS BPSL2837 NC_006350.1 3396632 3397459 D Similar to Ralstonia solanacearum nitrilase rsc2658 or rs04553 SWALL:Q8XW17 (EMBL:AL646071) (289 aa) fasta scores: E(): 1.2e-72, 64.31% id in 269 aa, and to Neisseria meningitidis hypothetical protein Nma2044 SWALL:Q9JT13 (EMBL:AL162757) (270 aa) fasta scores: E(): 1.3e-51, 52.67% id in 262 aa, and to Neisseria meningitidis nitrilase nmb0441 SWALL:Q9K0W5 (EMBL:AE002400) (270 aa) fasta scores: E(): 1.8e-51, 53.43% id in 262 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4475 SWALL:Q9HVU6 (EMBL:AE004861) (282 aa) fasta scores: E(): 3.5e-44, 46.06% id in 267 aa; carbon-nitrogen hydrolase 3396632..3397459 Burkholderia pseudomallei K96243 3091839 YP_109432.1 CDS tldD NC_006350.1 3397539 3399035 D Similar to Escherichia coli, and Escherichia coli O6 TldD DNA gyrase control protein or b3244 or c3999 SWALL:TLDD_ECOLI (SWALL:P46473) (481 aa) fasta scores: E(): 3.9e-104, 59.38% id in 485 aa, and to Ralstonia solanacearum probable TldD protein or rsc2659 or rs04552 SWALL:Q8XW16 (EMBL:AL646071) (486 aa) fasta scores: E(): 1.4e-146, 80.08% id in 487 aa, and to Xanthomonas campestris TldD protein or xcc2606 SWALL:AAM41878 (EMBL:AE012372) (481 aa) fasta scores: E(): 1.6e-113, 64.22% id in 478 aa; DNA gyrase control protein 3397539..3399035 Burkholderia pseudomallei K96243 3092359 YP_109433.1 CDS aroG NC_006350.1 3399445 3400518 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3399445..3400518 Burkholderia pseudomallei K96243 3092395 YP_109434.1 CDS hmpA NC_006350.1 3400797 3402005 R Similar to Alcaligenes eutrophus flavohemoprotein Fhp SWALL:HMPA_ALCEU (SWALL:P39662) (403 aa) fasta scores: E(): 1.9e-68, 52.68% id in 391 aa, and to Salmonella typhimurium flavohemoprotein Hmp or HmpA or FrsB or stm2556 SWALL:HMPA_SALTY (SWALL:P26353) (396 aa) fasta scores: E(): 4.6e-49, 41.85% id in 399 aa; flavohemoprotein complement(3400797..3402005) Burkholderia pseudomallei K96243 3092234 YP_109435.1 CDS BPSL2841 NC_006350.1 3402117 3402689 R Similar to Ralstonia solanacearum hypothetical protein rsc2663 or rs04544 SWALL:Q8XW12 (EMBL:AL646071) (185 aa) fasta scores: E(): 4.8e-55, 80.11% id in 181 aa, and to Xanthomonas campestris hypothetical protein Xcc0796 SWALL:AAM40111 (EMBL:AE012179) (185 aa) fasta scores: E(): 2.8e-38, 60% id in 185 aa, and to Xanthomonas axonopodis hypothetical protein Xac0870 SWALL:AAM35758 (EMBL:AE011718) (185 aa) fasta scores: E(): 1.6e-36, 57.83% id in 185 aa; hypothetical protein complement(3402117..3402689) Burkholderia pseudomallei K96243 3091840 YP_109436.1 CDS BPSL2842 NC_006350.1 3402853 3404262 D Similar to Escherichia coli, and Escherichia coli O6 glycolate oxidase subunit GlcD or Gox or b2979 or c3709 SWALL:GLCD_ECOLI (SWALL:P52075) (499 aa) fasta scores: E(): 1.3e-37, 32.22% id in 419 aa, and to the C-terminal region of Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome], mitochondrial precursor Dld1 or Dld or ydl174C SWALL:DLD1_YEAST (SWALL:P32891) (587 aa) fasta scores: E(): 1.6e-60, 43.34% id in 436 aa; FAD-binding oxidase 3402853..3404262 Burkholderia pseudomallei K96243 3094160 YP_109437.1 CDS glcD NC_006350.1 3404327 3405820 D Similar to Escherichia coli, and Escherichia coli O6 glycolate oxidase subunit GlcD or Gox or b2979 or c3709 SWALL:GLCD_ECOLI (SWALL:P52075) (499 aa) fasta scores: E(): 4.2e-114, 59.91% id in 479 aa, and to Ralstonia solanacearum probable glycolate oxidase or rsc2666 or rs04539 SWALL:Q8XW09 (EMBL:AL646071) (497 aa) fasta scores: E(): 6e-152, 76.45% id in 497 aa, and to Pseudomonas aeruginosa glycolate oxidase subunit GlcD or pa5355 SWALL:Q9HTK3 (EMBL:AE004947) (499 aa) fasta scores: E(): 4.8e-115, 61.99% id in 471 aa; glycolate oxidase subunit GlcD 3404327..3405820 Burkholderia pseudomallei K96243 3093324 YP_109438.1 CDS glcE NC_006350.1 3405922 3407010 D Similar to Escherichia coli glycolate oxidase subunit GlcE or Gox or b2977.1 SWALL:GLCE_ECOLI (SWALL:P52073) (350 aa) fasta scores: E(): 3e-54, 48.06% id in 362 aa, and to Ralstonia solanacearum probable glycolate oxidase subunit oxidoreductase GlcE or rsc2667 or rs04538 SWALL:Q8XW08 (EMBL:AL646071) (372 aa) fasta scores: E(): 3.3e-70, 56.13% id in 367 aa, and to Pseudomonas aeruginosa glycolate oxidase subunit GlcE or pa5354 SWALL:Q9HTK4 (EMBL:AE004947) (359 aa) fasta scores: E(): 4.3e-55, 50.57% id in 350 aa; glycolate oxidase FAD binding subunit 3405922..3407010 Burkholderia pseudomallei K96243 3092816 YP_109439.1 CDS glcF NC_006350.1 3407017 3408243 D Similar to Escherichia coli glycolate oxidase iron-sulfur subunit GlcF or Gox or b2978 SWALL:GLCF_ECOLI (SWALL:P52074) (407 aa) fasta scores: E(): 1.2e-88, 57% id in 407 aa, and to Ralstonia solanacearum probable glycolate oxidase GlcF or rsc2668 or rs04537 SWALL:Q8XW07 (EMBL:AL646071) (415 aa) fasta scores: E(): 3.7e-99, 60.09% id in 416 aa, and to Pseudomonas aeruginosa glycolate oxidase subunit GlcF or pa5353 SWALL:Q9HTK5 (EMBL:AE004947) (408 aa) fasta scores: E(): 5.7e-82, 52.56% id in 409 aa; glycolate oxidase iron-sulfur subunit 3407017..3408243 Burkholderia pseudomallei K96243 3092568 YP_109440.1 CDS BPSL2846 NC_006350.1 3408489 3409187 D Similar to Ralstonia solanacearum hypothetical protein rsc2683 or rs00038 SWALL:Q8XVZ2 (EMBL:AL646071) (240 aa) fasta scores: E(): 1.1e-53, 68.35% id in 237 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0394 SWALL:Y394_PSEAE (SWALL:P24562) (230 aa) fasta scores: E(): 7.3e-52, 68.26% id in 230 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YggS or b2951 or c3537 or z4296 or ecs3826 SWALL:YGGS_ECOLI (SWALL:P52054) (234 aa) fasta scores: E(): 7e-46, 60.34% id in 232 aa; hypothetical protein 3408489..3409187 Burkholderia pseudomallei K96243 3094161 YP_109441.1 CDS BPSL2847 NC_006350.1 3409222 3410034 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3409222..3410034 Burkholderia pseudomallei K96243 3093429 YP_109442.1 CDS phnE NC_006350.1 3410457 3411272 R Similar to Escherichia coli phosphonate transport system permease PhnE or b4013/b4104 SWALL:PHNE_ECOLI (SWALL:P16683) (276 aa) fasta scores: E(): 1.5e-61, 61.33% id in 269 aa, and to Escherichia coli O157:H7 membrane channel protein component of Phn transporter PhnE or z5706 or ecs5086 SWALL:Q8XDV9 (EMBL:AE005643) (276 aa) fasta scores: E(): 2.6e-61, 61.33% id in 269 aa, and to Pseudomonas aeruginosa phosphonate transport protein PhnE or pa3382 SWALL:Q9HYL9 (EMBL:AE004759) (264 aa) fasta scores: E(): 6.8e-61, 61.39% id in 259 aa; phosphonate transport protein PhnE complement(3410457..3411272) Burkholderia pseudomallei K96243 3094534 YP_109443.1 CDS phnD NC_006350.1 3411269 3412264 R Similar to Escherichia coli phosphonates-binding periplasmic protein precursor PhnD or PsiD or b4105 SWALL:PHND_ECOLI (SWALL:P16682) (338 aa) fasta scores: E(): 1.3e-51, 46.2% id in 316 aa, and to Pseudomonas aeruginosa binding protein component of ABC phosphonate transporter pa3383 SWALL:Q9HYL8 (EMBL:AE004759) (334 aa) fasta scores: E(): 3.3e-53, 45.34% id in 333 aa; phosphonates-binding periplasmic protein complement(3411269..3412264) Burkholderia pseudomallei K96243 3091666 YP_109444.1 CDS phnC NC_006350.1 3412347 3413318 R Similar to Escherichia coli phosphonates transport ATP-binding protein PhnC or b4106 SWALL:PHNC_ECOLI (SWALL:P16677) (262 aa) fasta scores: E(): 4.2e-38, 54.06% id in 246 aa, and to Pseudomonas aeruginosa ATP-binding component of ABC phosphonate transporter PhnC or pa3384 SWALL:Q9HYL7 (EMBL:AE004759) (278 aa) fasta scores: E(): 3.6e-39, 52.03% id in 271 aa, and to Escherichia coli O157:H7 ATP-binding component of phosphonate transport PhnC or z5708 or ecs5088 SWALL:Q8XDV7 (EMBL:AE005643) (262 aa) fasta scores: E(): 1.4e-38, 54.87% id in 246 aa; possible alternative start site at codon 18; phosphonates transport ATP-binding protein PhnC complement(3412347..3413318) Burkholderia pseudomallei K96243 3091665 YP_109445.1 CDS phnM NC_006350.1 3413504 3414634 R Similar to Escherichia coli phosphonates metabolism protein PhnM or b4095 SWALL:PHNM_ECOLI (SWALL:P16689) (378 aa) fasta scores: E(): 1.1e-50, 42.69% id in 356 aa, and to Brucella melitensis PhnM protein bmei1106 SWALL:Q8YGQ2 (EMBL:AE009550) (379 aa) fasta scores: E(): 4.1e-64, 48.8% id in 377 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3374 SWALL:Q9HYM7 (EMBL:AE004759) (387 aa) fasta scores: E(): 4.6e-63, 49.74% id in 384 aa; phosphonate metabolism PhnM protein complement(3413504..3414634) Burkholderia pseudomallei K96243 3093484 YP_109446.1 CDS phnL NC_006350.1 3414649 3415446 R Similar to Escherichia coli phosphonates transport ATP-binding protein PhnL or b4096 SWALL:PHNL_ECOLI (SWALL:P16679) (226 aa) fasta scores: E(): 9e-35, 56% id in 225 aa, and to Rhizobium loti phosphonate transport ATP-binding protein PhnL SWALL:CAD31337 (EMBL:AL672114) (239 aa) fasta scores: E(): 3.9e-39, 61.71% id in 222 aa, and to Rhizobium loti phosphonates transport ATP-binding protein, PhnL mlr9286 SWALL:Q981P7 (EMBL:AP003015) (244 aa) fasta scores: E(): 8.1e-39, 62.16% id in 222 aa; possible alternative start site at codon 26; phosphonates transport ATP-binding protein PhnL complement(3414649..3415446) Burkholderia pseudomallei K96243 3093832 YP_109447.1 CDS phnK NC_006350.1 3415455 3416225 R Similar to Escherichia coli phosphonates transport ATP-binding protein PhnK or b4097 SWALL:PHNK_ECOLI (SWALL:P16678) (252 aa) fasta scores: E(): 3.8e-51, 65.07% id in 252 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa3376 SWALL:Q9HYM5 (EMBL:AE004759) (271 aa) fasta scores: E(): 8.1e-59, 71.03% id in 252 aa, and to Anabaena sp. phosphonate ABC transporter ATP-binding component PhnK or all2218 SWALL:Q8YUW3 (EMBL:AP003588) (257 aa) fasta scores: E(): 2.6e-54, 65.07% id in 252 aa; phosphonate C-P lyase system protein PhnK complement(3415455..3416225) Burkholderia pseudomallei K96243 3093831 YP_109448.1 CDS phnJ NC_006350.1 3416222 3417196 R Similar to Escherichia coli protein PhnJ or b4098 SWALL:PHNJ_ECOLI (SWALL:P16688) (281 aa) fasta scores: E(): 1.2e-78, 71.16% id in 267 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3377 SWALL:Q9HYM4 (EMBL:AE004759) (294 aa) fasta scores: E(): 2.5e-82, 69.72% id in 294 aa, and to Rhizobium loti phosphonate metabolism protein, PhnJ mlr9282 SWALL:Q981Q0 (EMBL:AP003015) (297 aa) fasta scores: E(): 4e-80, 68.98% id in 287 aa; phosphonate metabolism PhnJ protein complement(3416222..3417196) Burkholderia pseudomallei K96243 3094145 YP_109449.1 CDS phnI NC_006350.1 3417193 3418407 R Similar to Escherichia coli phosphonate metabolism PhnI protein or b4099 SWALL:PHNI_ECOLI (SWALL:P16687) (354 aa) fasta scores: E(): 1.1e-28, 59.45% id in 370 aa, and to Anabaena sp. phosphonate metabolism protein PhnI or all2222 SWALL:Q8YUV9 (EMBL:AP003588) (415 aa) fasta scores: E(): 1.9e-54, 55.02% id in 398 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3378 SWALL:Q9HYM3 (EMBL:AE004759) (366 aa) fasta scores: E(): 2.7e-33, 64.19% id in 377 aa; phosphonate metabolism PhnI protein complement(3417193..3418407) Burkholderia pseudomallei K96243 3094144 YP_109450.1 CDS phnH NC_006350.1 3418407 3419036 R Similar to Escherichia coli PhnH protein or b4100 SWALL:PHNH_ECOLI (SWALL:P16686) (194 aa) fasta scores: E(): 1.4e-16, 39.37% id in 193 aa, and to Agrobacterium tumefaciens hypothetical protein PhnH or atu0180 or agr_c_302 SWALL:Q8UIW1 (EMBL:AE008992) (203 aa) fasta scores: E(): 1.5e-20, 41.23% id in 194 aa, and to Rhizobium loti hypothetical protein Mlr3343 SWALL:Q98GG3 (EMBL:AP003001) (203 aa) fasta scores: E(): 7e-20, 39.39% id in 198 aa, and to Rhizobium meliloti PhnH protein or rb1452 or smb20760 SWALL:PHNH_RHIME (SWALL:Q52985) (200 aa) fasta scores: E(): 4.8e-19, 42.13% id in 197 aa; carbon-phosphorus lyase complex subunit complement(3418407..3419036) Burkholderia pseudomallei K96243 3093008 YP_109451.1 CDS phnG NC_006350.1 3419033 3419581 R Similar to Escherichia coli PhnG protein or b4101 SWALL:PHNG_ECOLI (SWALL:P16685) (150 aa) fasta scores: E(): 8.5e-06, 38.15% id in 173 aa, and to Rhizobium loti C-P lyase subunit phnJ protein phosphonate metabolism phnG SWALL:CAD31343 (EMBL:AL672114) (151 aa) fasta scores: E(): 1e-09, 43.19% id in 169 aa, and to Rhizobium loti phosphonate metabolism protein mll9155 SWALL:Q982B0 (EMBL:AP003015) (154 aa) fasta scores: E(): 2.1e-09, 42.3% id in 182 aa; phosphonate metabolism PhnG protein complement(3419033..3419581) Burkholderia pseudomallei K96243 3093458 YP_109452.1 CDS phnF NC_006350.1 3419714 3420532 D Similar to Escherichia coli probable transcriptional regulator PhnF or b4102 SWALL:PHNF_ECOLI (SWALL:P16684) (241 aa) fasta scores: E(): 4.1e-11, 32.07% id in 212 aa, and to Rhizobium loti transcriptional regulator mll3341 SWALL:Q98GG5 (EMBL:AP003001) (249 aa) fasta scores: E(): 1.1e-24, 41.42% id in 239 aa, and to Rhizobium meliloti hypothetical transcriptional regulator Rb1450 or smb20758 SWALL:YPF0_RHIME (SWALL:O86029) (243 aa) fasta scores: E(): 1.7e-24, 38.23% id in 238 aa, and to Agrobacterium tumefaciens transcriptional regulator, GntR family atu0182 or agr_c_306 SWALL:Q8UIV9 (EMBL:AE008992) (245 aa) fasta scores: E(): 2.8e-22, 34.31% id in 239 aa; GntR family transcriptional regulator 3419714..3420532 Burkholderia pseudomallei K96243 3093457 YP_109453.1 CDS BPSL2859 NC_006350.1 3420522 3421319 D Similar to Brucella melitensis hypothetical cytosolic protein Bmei1107 SWALL:Q8YGQ1 (EMBL:AE009550) (243 aa) fasta scores: E(): 1.1e-18, 35.53% id in 242 aa, and to Agrobacterium tumefaciens hypothetical protein atu0170 or agr_c_280 SWALL:Q8UIX1 (EMBL:AE008991) (232 aa) fasta scores: E(): 1.4e-17, 36.2% id in 232 aa, and to Rhizobium meliloti hypothetical protein rb1170 or smb20876 SWALL:Q92UG1 (EMBL:AL603646) (265 aa) fasta scores: E(): 3.6e-16, 34.83% id in 244 aa; hypothetical protein 3420522..3421319 Burkholderia pseudomallei K96243 3093430 YP_109454.1 CDS phnN NC_006350.1 3421316 3421870 D Similar to Escherichia coli ATP-binding protein PhnN or b4094 SWALL:PHNN_ECOLI (SWALL:P16690) (185 aa) fasta scores: E(): 9.5e-24, 48.58% id in 177 aa, and to Rhizobium loti ATP-binding component of phosphonate transport mll9141 SWALL:Q982C3 (EMBL:AP003015) (187 aa) fasta scores: E(): 1.3e-24, 48.85% id in 174 aa; ATP-binding protein PhnN 3421316..3421870 Burkholderia pseudomallei K96243 3094078 YP_109455.1 CDS ubiA NC_006350.1 3422301 3423251 R catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase complement(3422301..3423251) Burkholderia pseudomallei K96243 3094205 YP_109456.1 CDS BPSL2862 NC_006350.1 3423627 3424163 R Similar to Pseudomonas aeruginosa hypothetical protein Pa1607 SWALL:Q9I3B4 (EMBL:AE004588) (146 aa) fasta scores: E(): 4.3e-28, 55.47% id in 146 aa, and to Rhizobium meliloti hypothetical protein ra1074 or sma1960 SWALL:Q92Y14 (EMBL:AE007293) (125 aa) fasta scores: E(): 1.8e-20, 54.83% id in 124 aa, and to Caulobacter crescentus hypothetical protein Cc0645 SWALL:Q9AAF6 (EMBL:AE005740) (188 aa) fasta scores: E(): 1.7e-17, 40.54% id in 148 aa; hypothetical protein complement(3423627..3424163) Burkholderia pseudomallei K96243 3093451 YP_109457.1 CDS BPSL2863 NC_006350.1 3424448 3424936 R Similar to Bacillus anthracis miniferritin Dlp1 SWALL:Q8RPQ2 (EMBL:AF374268) (146 aa) fasta scores: E(): 3e-13, 38.73% id in 142 aa, and to Ralstonia solanacearum DNA protection during starvation or oxidative stress transcription regulator protein DPS or rsc2687 or rs00034 SWALL:Q8XVY8 (EMBL:AL646071) (166 aa) fasta scores: E(): 1.6e-48, 79.51% id in 166 aa, and to Anabaena sp. hypothetical protein All4145 SWALL:Q8YPP7 (EMBL:AP003595) (163 aa) fasta scores: E(): 1.3e-44, 77.01% id in 161 aa; ferritin complement(3424448..3424936) Burkholderia pseudomallei K96243 3093452 YP_109458.1 CDS BPSL2864 NC_006350.1 3425136 3425309 R No database matches. Doubtful CDS; hypothetical protein complement(3425136..3425309) Burkholderia pseudomallei K96243 3092019 YP_109459.1 CDS katG NC_006350.1 3425408 3427654 R Virtually identical to previously sequenced Burkholderia pseudomallei catalase-peroxidase KatG SWALL:Q939D2 (EMBL:AY040244) (619 aa) fasta scores: E(): 0, 97.26% id in 622 aa, and similar to Methanosarcina acetivorans catalase/peroxidase ma0972 SWALL:Q8TS34 (EMBL:AE010762) (736 aa) fasta scores: E(): 0, 77.62% id in 733 aa, and to Rhizobium loti catalase/peroxidase mlr6940 SWALL:Q987S0 (EMBL:AP003010) (756 aa) fasta scores: E(): 0, 73.61% id in 758 aa; catalase-peroxidase complement(3425408..3427654) Burkholderia pseudomallei K96243 3092072 YP_109460.1 CDS oxyR NC_006350.1 3428080 3429039 R Previously sequenced as Burkholderia pseudomallei oxidative stress regulatory protein OxyR SWALL:Q939D3 (EMBL:AY040244) (319 aa) fasta scores: E(): 7.7e-125, 100% id in 319 aa. Highly similar to Ralstonia solanacearum probable hydrogen peroxide-inducible genes activator transcription regulator protein oxyR or rsc2690 or rs00030 SWALL:Q8XVY5 (EMBL:AL646071) (317 aa) fasta scores: E(): 6.5e-94, 77.42% id in 319 aa; oxidative stress regulatory protein complement(3428080..3429039) Burkholderia pseudomallei K96243 3093036 YP_109461.1 CDS recG NC_006350.1 3429175 3431421 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(3429175..3431421) Burkholderia pseudomallei K96243 3092198 YP_109462.1 CDS queA NC_006350.1 3432038 3433120 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3432038..3433120 Burkholderia pseudomallei K96243 3092055 YP_109463.1 CDS tgt NC_006350.1 3433421 3434614 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3433421..3434614 Burkholderia pseudomallei K96243 3092225 YP_109464.1 CDS yajC NC_006350.1 3435044 3435370 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 3435044..3435370 Burkholderia pseudomallei K96243 3092020 YP_109465.1 CDS secD NC_006350.1 3435478 3437502 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3435478..3437502 Burkholderia pseudomallei K96243 3091980 YP_109466.1 CDS secF NC_006350.1 3437518 3438468 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3437518..3438468 Burkholderia pseudomallei K96243 3092984 YP_109467.1 CDS BPSL2873 NC_006350.1 3438714 3439337 R Similar to Ralstonia solanacearum probable sugar-proton symporter transmembrane protein rsp0536 or rs00416 SWALL:Q8XSE0 (EMBL:AL646079) (441 aa) fasta scores: E(): 1.2e-21, 43.13% id in 204 aa, and to the C-terminal region of Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 1.2e-14, 35.02% id in 177 aa; hypothetical protein complement(3438714..3439337) Burkholderia pseudomallei K96243 3092293 YP_109468.1 CDS BPSL2874 NC_006350.1 3439438 3440016 R Similar to Ralstonia solanacearum probable signal peptide protein rsc2717 or rs00005 SWALL:Q8XVW0 (EMBL:AL646071) (198 aa) fasta scores: E(): 5.8e-48, 65.26% id in 190 aa, and to Salmonella typhi exported protein sty1443 SWALL:Q8Z764 (EMBL:AL627270) (191 aa) fasta scores: E(): 4.7e-18, 36.59% id in 194 aa; hypothetical protein complement(3439438..3440016) Burkholderia pseudomallei K96243 3092294 YP_109469.1 CDS BPSL2875 NC_006350.1 3440083 3440643 R Similar to Ralstonia solanacearum probable signal peptide protein rsc2718 or rs00003 SWALL:Q8XVV9 (EMBL:AL646071) (189 aa) fasta scores: E(): 1.9e-32, 53.51% id in 185 aa, and to Xanthomonas axonopodis hypothetical protein xac3034 SWALL:AAM37879 (EMBL:AE011945) (189 aa) fasta scores: E(): 7.4e-10, 32% id in 175 aa; hypothetical protein complement(3440083..3440643) Burkholderia pseudomallei K96243 3094291 YP_109470.1 CDS BPSL2876 NC_006350.1 3440655 3441218 R Similar to Ralstonia solanacearum cytochrome b-561 transmembrane protein rsc2719 or rs00083 SWALL:Q8XVV8 (EMBL:AL646071) (195 aa) fasta scores: E(): 5.8e-36, 55.08% id in 187 aa, and to Xanthomonas campestris cytochrome b561 xcc2850 SWALL:Q8P6W5 (EMBL:AE012398) (187 aa) fasta scores: E(): 8.8e-20, 41.56% id in 166 aa; cytochrome b-561 membrane protein complement(3440655..3441218) Burkholderia pseudomallei K96243 3094292 YP_109471.1 CDS BPSL2877 NC_006350.1 3441483 3442139 D Similar to Vibrio cholerae paraquat-inducible protein A vc1753 SWALL:Q9KR89 (EMBL:AE004252) (434 aa) fasta scores: E(): 1.5e-15, 31.22% id in 205 aa, and to the C-terminal region of Escherichia coli, and Escherichia coli O6 paraquat-inducible protein A PqiA or Pqi5A or b0950 or c1086 SWALL:PQIA_ECOLI (SWALL:P43670) (417 aa) fasta scores: E(): 2.1e-09, 26.02% id in 196 aa; paraquat-inducible protein 3441483..3442139 Burkholderia pseudomallei K96243 3092120 YP_109472.1 CDS BPSL2878 NC_006350.1 3442136 3442798 D Similar to Pseudomonas aeruginosa paraquat-inducible protein A SWALL:Q9APY1 (EMBL:AF241171) (237 aa) fasta scores: E(): 6.1e-35, 54.58% id in 207 aa, and to the C-terminal region of Escherichia coli, and Escherichia coli O6 paraquat-inducible protein A PqiA or Pqi5A or b0950 or c1086 SWALL:PQIA_ECOLI (SWALL:P43670) (417 aa) fasta scores: E(): 1.4e-24, 41.74% id in 218 aa; paraquat-inducible protein 3442136..3442798 Burkholderia pseudomallei K96243 3092121 YP_109473.1 CDS lpw206-207 NC_006350.1 3442785 3444446 D Identical to previously sequenced Burkholderia pseudomallei paraquat-inducible protein Lpw206-207 SWALL:Q93M60 (EMBL:AY027530) (553 aa) fasta scores: E(): 2.9e-200, 99.81% id in 553 aa, and to Escherichia coli paraquat-inducible protein B PqiB or Pqi5B or b0951 SWALL:PQIB_ECOLI (SWALL:P43671) (546 aa) fasta scores: E(): 2.5e-48, 33.72% id in 507 aa; paraquat-inducible protein 3442785..3444446 Burkholderia pseudomallei K96243 3093537 YP_109474.1 CDS BPSL2880 NC_006350.1 3444443 3445213 D Similar to Ralstonia solanacearum hypothetical protein rsc0600 or rs04845 SWALL:Q8Y1T9 (EMBL:AL646060) (211 aa) fasta scores: E(): 1.8e-16, 36.57% id in 216 aa; lipoprotein 3444443..3445213 Burkholderia pseudomallei K96243 3094142 YP_109475.1 CDS BPSL2881 NC_006350.1 3446148 3448265 D Similar to Ralstonia solanacearum site-specific recombinase transmembrane protein rsc1012 or rs04272 SWALL:Q8Y0N1 (EMBL:AL646062) (696 aa) fasta scores: E(): 1.3e-121, 51.07% id in 695 aa, and to Neisseria meningitidis site-specific recombinase nmb1278 SWALL:Q9JZ60 (EMBL:AE002476) (668 aa) fasta scores: E(): 7.6e-36, 27.78% id in 583 aa; hypothetical protein 3446148..3448265 Burkholderia pseudomallei K96243 3094143 YP_109476.1 CDS BPSL2882 NC_006350.1 3448434 3449726 D Similar to Ralstonia solanacearum hypothetical protein rsc2739 or rs00115 SWALL:Q8XVT8 (EMBL:AL646071) (471 aa) fasta scores: E(): 4.1e-74, 53.72% id in 456 aa, and to Neisseria meningitidis hypothetical protein nmb0455 SWALL:Q9K0V4 (EMBL:AE002401) (380 aa) fasta scores: E(): 2.6e-49, 43.06% id in 418 aa; RNA-methylase 3448434..3449726 Burkholderia pseudomallei K96243 3092339 YP_109477.1 CDS BPSL2883 NC_006350.1 3451155 3451565 D Similar to Ralstonia solanacearum hypothetical protein rsc2671 or rs04534 SWALL:Q8XW04 (EMBL:AL646071) (131 aa) fasta scores: E(): 1.2e-12, 43.22% id in 118 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical protein stm0409 or sty0447 SWALL:Q8XFK5 (EMBL:AE008714) (121 aa) fasta scores: E(): 3.9e-11, 41.8% id in 122 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 3451155..3451565 Burkholderia pseudomallei K96243 3092340 YP_109478.1 CDS BPSL2884 NC_006350.1 3452044 3452730 D Similar to Ralstonia solanacearum repressor transcription regulator protein rsc2673 or rs00048 SWALL:Q8XW02 (EMBL:AL646071) (232 aa) fasta scores: E(): 1.5e-40, 50.67% id in 223 aa, and to Rhizobium loti transcriptional regulator mlr3764 SWALL:Q98FI3 (EMBL:AP003002) (239 aa) fasta scores: E(): 3.4e-39, 48.63% id in 220 aa; hypothetical protein 3452044..3452730 Burkholderia pseudomallei K96243 3092416 YP_109479.1 CDS pntB NC_006350.1 3453240 3454694 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) PntB or b1602 or c1994 or z2597 or ecs2308 SWALL:PNTB_ECOLI (SWALL:P07002) (462 aa) fasta scores: E(): 1.3e-64, 50.3% id in 487 aa, and to Ralstonia solanacearum probable transmembrane NADP(P) transhydrogenase subunit beta rsc2733 or rs00121 SWALL:Q8XVU4 (EMBL:AL646071) (486 aa) fasta scores: E(): 1.7e-135, 80.16% id in 489 aa; NAD(P) transhydrogenase subunit beta complement(3453240..3454694) Burkholderia pseudomallei K96243 3092871 YP_109480.1 CDS pntAB NC_006350.1 3454691 3455020 R Similar to the C-terminal region of Escherichia coli NAD(P) transhydrogenase subunit alpha (EC 1.6.1.2) PntA or b1603 SWALL:PNTA_ECOLI (SWALL:P07001) (510 aa) fasta scores: E(): 4.5e-12, 58.53% id in 82 aa, and to Ralstonia solanacearum probable transmembrane NAD(P) transhydrogenase subunit alpha rsc2732 or rs00122 SWALL:Q8XVU5 (EMBL:AL646071) (107 aa) fasta scores: E(): 9.1e-26, 80.61% id in 98 aa; NAD(P) transhydrogenase subunit alpha complement(3454691..3455020) Burkholderia pseudomallei K96243 3093542 YP_109481.1 CDS pntAA NC_006350.1 3455033 3456172 R Similar to the N-terminal region of Escherichia coli NAD(P) transhydrogenase subunit alpha (EC 1.6.1.2) PntA or b1603 SWALL:PNTA_ECOLI (SWALL:P07001) (510 aa) fasta scores: E(): 4.9e-42, 44.85% id in 379 aa, and to Ralstonia solanacearum probable NAD(P) transhydrogenase subunit alpha rsc2730 or rs00124 SWALL:Q8XVU7 (EMBL:AL646071) (379 aa) fasta scores: E(): 3.6e-92, 72.75% id in 378 aa; NAD(P) transhydrogenase subunit alpha complement(3455033..3456172) Burkholderia pseudomallei K96243 3093541 YP_109482.1 CDS BPSL2888 NC_006350.1 3456416 3456925 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 NUDIX hydrolase YmfB or b1134 or c1513 or z1863 or ecs1606 SWALL:YMFB_ECOLI (SWALL:P75965) (153 aa) fasta scores: E(): 9e-13, 38.77% id in 147 aa, and to Ralstonia solanacearum hypothetical protein rsc2724 or rs00130 SWALL:Q8XVV3 (EMBL:AL646071) (168 aa) fasta scores: E(): 9.4e-37, 57.14% id in 161 aa; hydrolase 3456416..3456925 Burkholderia pseudomallei K96243 3092417 YP_109483.1 CDS mnmA NC_006350.1 3456922 3458073 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 3456922..3458073 Burkholderia pseudomallei K96243 3093062 YP_109484.1 CDS BPSL2890 NC_006350.1 3458195 3459835 D Similar to Leptospira interrogans glutamate synthase GltB2 or lb286 SWALL:AAN51845 (EMBL:AE011615) (550 aa) fasta scores: E(): 2.5e-55, 42.5% id in 487 aa, and to Pseudomonas putida glutamate synthase, large subunit, pp1060 SWALL:AAN66685 (EMBL:AE016778) (539 aa) fasta scores: E(): 1.4e-141, 65.16% id in 534 aa; glutamate synthase 3458195..3459835 Burkholderia pseudomallei K96243 3092460 YP_109485.1 CDS BPSL2891 NC_006350.1 3460103 3460711 R Similar to Escherichia coli, and Escherichia coli O6 hypothetical GST-like protein YibF or b3592 or c4413 SWALL:YIBF_ECOLI (SWALL:P32105) (202 aa) fasta scores: E(): 4.1e-20, 35.82% id in 201 aa, and to Ralstonia solanacearum glutathione S-transferase rsc2721 or rs00001 SWALL:Q8XVV6 (EMBL:AL646071) (202 aa) fasta scores: E(): 1.2e-58, 66.33% id in 202 aa; glutathione S-transferase-like protein complement(3460103..3460711) Burkholderia pseudomallei K96243 3092461 YP_109486.1 CDS BPSL2892 NC_006350.1 3461269 3462678 D Similar to Escherichia coli Xaa-Pro aminopeptidase PepP or b2908 SWALL:AMPP_ECOLI (SWALL:P15034) (440 aa) fasta scores: E(): 3.6e-54, 43.04% id in 446 aa, and to Ralstonia solanacearum probable Xaa-Pro aminopeptidase rsc0509 or rs04998 SWALL:Q8Y227 (EMBL:AL646059) (458 aa) fasta scores: E(): 1.8e-118, 67.62% id in 454 aa; aminopeptidase 3461269..3462678 Burkholderia pseudomallei K96243 3093835 YP_109487.1 CDS BPSL2893 NC_006350.1 3462723 3463916 D Similar to Escherichia coli 2-octaprenyl-6-methoxyphenol hydroxylase UbiH or VisB or b2907 SWALL:UBIH_ECOLI (SWALL:P25534) (392 aa) fasta scores: E(): 6.8e-32, 35.36% id in 393 aa, and to Ralstonia solanacearum probable 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase rsc0508 or rs04999 SWALL:Q8Y228 (EMBL:AL646059) (411 aa) fasta scores: E(): 9.9e-46, 54.8% id in 416 aa; hypothetical protein 3462723..3463916 Burkholderia pseudomallei K96243 3093836 YP_109488.1 CDS BPSL2894 NC_006350.1 3464124 3465188 D Similar to Rhodobacter capsulatus nitrogen regulation protein NifR3 SWALL:NIR3_RHOCA (SWALL:Q08111) (324 aa) fasta scores: E(): 9.7e-44, 45.89% id in 329 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YhdG or b3260 or c4026 or z4620 or ecs4132 SWALL:YHDG_ECOLI (SWALL:P25717) (321 aa) fasta scores: E(): 5e-63, 56.69% id in 321 aa; nitrogen regulation-like protein 3464124..3465188 Burkholderia pseudomallei K96243 3094392 YP_109489.1 CDS fis NC_006350.1 3465185 3465418 D Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, Salmonella typhi, and Serratia marcescens DNA-binding protein Fis or b3261 or c4027 or z4621 or ecs4133 or stm3385 or sty3565 SWALL:FIS_ECOLI (SWALL:P11028) (98 aa) fasta scores: E(): 1.5e-09, 40.78% id in 76 aa, and to Ralstonia solanacearum fis-like DNA-binding protein rsc0505 or rs05017 SWALL:FISL_RALSO (SWALL:Q8Y231) (77 aa) fasta scores: E(): 1.1e-20, 70.13% id in 77 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; DNA-binding protein Fis 3465185..3465418 Burkholderia pseudomallei K96243 3094663 YP_109490.1 CDS purH NC_006350.1 3465463 3467028 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3465463..3467028 Burkholderia pseudomallei K96243 3091910 YP_109491.1 CDS ruvC NC_006350.1 3467395 3467937 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3467395..3467937 Burkholderia pseudomallei K96243 3092930 YP_109492.1 CDS ruvA NC_006350.1 3468011 3468592 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3468011..3468592 Burkholderia pseudomallei K96243 3092278 YP_109493.1 CDS ruvB NC_006350.1 3468774 3469844 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3468774..3469844 Burkholderia pseudomallei K96243 3093138 YP_109494.1 CDS BPSL2900 NC_006350.1 3469870 3470826 D Similar to Ralstonia solanacearum hypothetical protein rsp1255 or rs05298 SWALL:Q8XQH2 (EMBL:AL646083) (298 aa) fasta scores: E(): 1e-65, 60.33% id in 295 aa, and to Xanthomonas axonopodis hypothetical protein xac3714 SWALL:AAM38557 (EMBL:AE012021) (308 aa) fasta scores: E(): 7.5e-47, 48.23% id in 284 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 3469870..3470826 Burkholderia pseudomallei K96243 3094393 YP_109495.1 CDS BPSL2901 NC_006350.1 3470958 3472100 D Very low similarity to Pseudomonas aeruginosa hypothetical protein pa4384 SWALL:Q9HW18 (EMBL:AE004854) (228 aa) fasta scores: E(): 3.6e-05, 31.84% id in 157 aa; lipoprotein 3470958..3472100 Burkholderia pseudomallei K96243 3093110 YP_109496.1 CDS BPSL2902 NC_006350.1 3472256 3472945 R Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri probable phosphoglycerate mutase GpmB or b4395 or z5997 or ecs5353 or sf4427 SWALL:GPMB_ECOLI (SWALL:P36942) (215 aa) fasta scores: E(): 1.7e-12, 36.19% id in 221 aa, and to Ralstonia solanacearum phosphoglycerate mutase 2 protein rsc0499 or rs05023 SWALL:Q8Y237 (EMBL:AL646059) (227 aa) fasta scores: E(): 1.8e-33, 46.84% id in 222 aa; phosphoglycerate mutase complement(3472256..3472945) Burkholderia pseudomallei K96243 3093111 YP_109497.1 CDS dtd NC_006350.1 3472953 3473432 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3472953..3473432) Burkholderia pseudomallei K96243 3094756 YP_109498.1 CDS tyrZ NC_006350.1 3473503 3474744 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3473503..3474744) Burkholderia pseudomallei K96243 3091718 YP_109499.1 CDS anmK NC_006350.1 3474875 3476086 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3474875..3476086 Burkholderia pseudomallei K96243 3092869 YP_109500.1 CDS BPSL2906 NC_006350.1 3476197 3476895 R Similar to Escherichia coli hypothetical GST-like protein YfcG or b2302 SWALL:YFCG_ECOLI (SWALL:P77526) (215 aa) fasta scores: E(): 2.6e-47, 59.61% id in 208 aa, and to Xanthomonas campestris glutathione S-transferase xcc3962 SWALL:AAM43183 (EMBL:AE012517) (229 aa) fasta scores: E(): 7.8e-54, 60.69% id in 229 aa. Note: Also similar to the upstream CDS BPSL1749 (235 aa) fasta scores: E(): 1.5e-27, 44.231% identity in 208 aa overlap; glutathione S-transferase-like protein complement(3476197..3476895) Burkholderia pseudomallei K96243 3092870 YP_109501.1 CDS BPSL2907 NC_006350.1 3476900 3477604 R Similar to Escherichia coli hypothetical GST-like protein YfcG or b2302 SWALL:YFCG_ECOLI (SWALL:P77526) (215 aa) fasta scores: E(): 6.6e-25, 41.7% id in 211 aa, and to Xanthomonas axonopodis glutathione S-transferase xac4047 SWALL:Q8PFD6 (EMBL:AE012053) (229 aa) fasta scores: E(): 5.2e-31, 45.45% id in 231 aa. Note: Also similar to the downstream CDS BPSL2906 (233 aa) fasta scores: E(): 1.9e-24, 39.224% identity in 232 aa overla; glutathione S-transferase like protein complement(3476900..3477604) Burkholderia pseudomallei K96243 3091916 YP_109502.1 CDS BPSL2908 NC_006350.1 3477697 3478599 D Similar to Xylella fastidiosa transcriptional regulator xf1254 SWALL:Q9PDX5 (EMBL:AE003959) (280 aa) fasta scores: E(): 1.7e-34, 42.22% id in 270 aa, and to Streptomyces antibioticus AraC-like transcription regulator SWALL:ARAL_STRAT (SWALL:Q03320) (303 aa) fasta scores: E(): 1.7e-15, 37.44% id in 219 aa; AraC family transcriptional regulator 3477697..3478599 Burkholderia pseudomallei K96243 3091917 YP_109503.1 CDS BPSL2909 NC_006350.1 3478769 3479137 R essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA complement(3478769..3479137) Burkholderia pseudomallei K96243 3093015 YP_109504.1 CDS rpsI NC_006350.1 3479344 3479736 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3479344..3479736) Burkholderia pseudomallei K96243 3092003 YP_109505.1 CDS rplM NC_006350.1 3479748 3480176 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3479748..3480176) Burkholderia pseudomallei K96243 3093602 YP_109506.1 CDS BPSL2912 NC_006350.1 3480846 3481268 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YhfA or b3356 or c4131 or z4717 or ecs4207 SWALL:YHFA_ECOLI (SWALL:P24246) (134 aa) fasta scores: E(): 3.5e-24, 48.57% id in 140 aa, and to Ralstonia solanacearum hypothetical protein rsc0489 or rs05752 SWALL:Q8Y247 (EMBL:AL646059) (148 aa) fasta scores: E(): 2.5e-42, 78.98% id in 138 aa; OsmC-like protein 3480846..3481268 Burkholderia pseudomallei K96243 3093016 YP_109507.1 CDS BPSL2913 NC_006350.1 3481935 3482777 R Similar to Ralstonia solanacearum transmembrane protein rsc0488 or rs05751 SWALL:Q8Y248 (EMBL:AL646059) (270 aa) fasta scores: E(): 6.2e-45, 52.65% id in 264 aa; hypothetical protein complement(3481935..3482777) Burkholderia pseudomallei K96243 3094601 YP_109508.1 CDS pyrC NC_006350.1 3483172 3484230 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(3483172..3484230) Burkholderia pseudomallei K96243 3093494 YP_109509.1 CDS BPSL2915 NC_006350.1 3484440 3485354 D Similar to Ralstonia solanacearum hypothetical protein rsc0485 or rs04388 SWALL:Q8Y251 (EMBL:AL646059) (276 aa) fasta scores: E(): 6.8e-84, 74.81% id in 266 aa, and to Neisseria meningitidis hypothetical protein nma0646 SWALL:Q9JVW6 (EMBL:AL162753) (280 aa) fasta scores: E(): 1.3e-57, 55.88% id in 272 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 3484440..3485354 Burkholderia pseudomallei K96243 3094602 YP_109510.1 CDS BPSL2916 NC_006350.1 3485801 3486139 R hypothetical protein complement(3485801..3486139) Burkholderia pseudomallei K96243 3094751 YP_109511.1 CDS BPSL2917 NC_006350.1 3486496 3486915 R Similar to Pseudomonas putida heat shock protein, pp3313 SWALL:AAN68920 (EMBL:AE016786) (123 aa) fasta scores: E(): 2.3e-12, 43.26% id in 104 aa, and to Rhizobium loti small heat shock protein mlr4721 SWALL:Q98DG0 (EMBL:AP003004) (159 aa) fasta scores: E(): 4e-09, 41.17% id in 102 aa. Note: Also similar to BPSL1322 (134 aa) fasta scores: E(): 3.1e-25, 57.576% identity in 132 aa overlap; heat shock Hsp20-like protein complement(3486496..3486915) Burkholderia pseudomallei K96243 3094752 YP_109512.1 CDS BPSL2918 NC_006350.1 3486981 3487421 R Similar to Pseudomonas putida heat shock protein, Hsp20 family pp3314 SWALL:AAN68921 (EMBL:AE016786) (151 aa) fasta scores: E(): 1.8e-18, 39.18% id in 148 aa, and to Thermotoga maritima small heat shock protein ShsP SWALL:Q9ZFD1 (EMBL:AF106330) (142 aa) fasta scores: E(): 8.1e-10, 36.23% id in 138 aa. Note: Also similar to BPSL1323 (199 aa) fasta scores: E(): 1.6e-33, 59.333% identity in 150 aa overlap; heat shock Hsp20-like protein complement(3486981..3487421) Burkholderia pseudomallei K96243 3092837 YP_109513.1 CDS groES2 NC_006350.1 3487884 3488201 D Similar to Chromatium vinosum 10 kDa chaperonin GroS or GroES SWALL:CH10_CHRVI (SWALL:P31295) (96 aa) fasta scores: E(): 2.7e-20, 57.89% id in 95 aa, and to Methylovorus sp. 10 kDa chaperonin GroS or GroES SWALL:Q9WWL3 (EMBL:AF152236) (105 aa) fasta scores: E(): 1.3e-24, 66.66% id in 105 aa. Note: Also similar to BPSL2698 (98 aa) fasta scores: E(): 4.5e-21, 59.375% identity in 96 aa overlap; molecular chaperone GroES 3487884..3488201 Burkholderia pseudomallei K96243 3094581 YP_109514.1 CDS BPSL2920 NC_006350.1 3488496 3488750 D hypothetical protein 3488496..3488750 Burkholderia pseudomallei K96243 3092838 YP_109515.1 CDS gltL NC_006350.1 3488860 3489585 R Similar to Escherichia coli, and Escherichia coli O157:H7 glutamate/aspartate transport ATP-binding protein GltL or b0652 or z0802 or ecs0691 SWALL:GLTL_ECOLI (SWALL:P41076) (241 aa) fasta scores: E(): 3.5e-64, 83.81% id in 241 aa, and to Yersinia pestis glutamate/aspartate transport ATP-binding protein ypo2612 SWALL:Q8ZDF6 (EMBL:AJ414153) (242 aa) fasta scores: E(): 1.5e-64, 84.64% id in 241 aa; glutamate/aspartate transport ATP-binding protein complement(3488860..3489585) Burkholderia pseudomallei K96243 3092767 YP_109516.1 CDS gltK NC_006350.1 3489582 3490259 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glutamate/aspartate transport system permease GltK or b0653 or c0737 or z0803 or ecs0692 SWALL:GLTK_ECOLI (SWALL:P41075) (224 aa) fasta scores: E(): 6.2e-58, 72.07% id in 222 aa, and to Salmonella typhi glutamate/aspartate transport system permease sty0708 SWALL:Q8Z8G9 (EMBL:AL627267) (224 aa) fasta scores: E(): 5.4e-59, 72.97% id in 222 aa; glutamate/aspartate transport system permease complement(3489582..3490259) Burkholderia pseudomallei K96243 3093708 YP_109517.1 CDS gltJ NC_006350.1 3490259 3490999 R Similar to Escherichia coli, and Escherichia coli O6 glutamate/aspartate transport system permease GltJ or b0654 or c0738 SWALL:GLTJ_ECOLI (SWALL:P41074) (246 aa) fasta scores: E(): 8.3e-62, 63.56% id in 247 aa, and to Yersinia pestis glutamate/aspartate transport system permease ypo2614 SWALL:Q8ZDF4 (EMBL:AJ414153) (246 aa) fasta scores: E(): 2.5e-64, 66.39% id in 247 aa; glutamate/aspartate transport system permease complement(3490259..3490999) Burkholderia pseudomallei K96243 3093707 YP_109518.1 CDS gltI NC_006350.1 3491082 3491984 R Similar to Escherichia coli glutamate/aspartate periplasmic binding protein precursor GltI or b0655 SWALL:GLTI_ECOLI (SWALL:P37902) (302 aa) fasta scores: E(): 8.4e-74, 67.88% id in 302 aa, and to Salmonella typhimurium glutamate/aspartate periplasmic binding protein precursor stm0665 SWALL:GLTI_SALTY (SWALL:Q9ZF60) (302 aa) fasta scores: E(): 2.4e-74, 68.64% id in 303 aa; glutamate/aspartate periplasmic binding protein complement(3491082..3491984) Burkholderia pseudomallei K96243 3092902 YP_109519.1 CDS BPSL2925 NC_006350.1 3492208 3493512 R Similar to Bacillus subtilis NAD-specific glutamate dehydrogenase GudB SWALL:GUDB_BACSU (SWALL:P50735) (426 aa) fasta scores: E(): 2.1e-70, 47.51% id in 402 aa, and to Salmonella typhimurium homolog of glutamic dehyrogenase stm1795 SWALL:Q8ZP21 (EMBL:AE008780) (441 aa) fasta scores: E(): 2.4e-109, 64.67% id in 419 aa; glutamate dehydrogenase complement(3492208..3493512) Burkholderia pseudomallei K96243 3094709 YP_109520.1 CDS BPSL2926 NC_006350.1 3493893 3494843 R Similar to Ralstonia solanacearum transcription regulator protein rsc0479 or rs04416 SWALL:Q8Y257 (EMBL:AL646059) (314 aa) fasta scores: E(): 2.6e-70, 64.55% id in 316 aa, and to Rhizobium meliloti transcriptional regulator ra0049 or sma0097 SWALL:Q930Z5 (EMBL:AE007199) (313 aa) fasta scores: E(): 3.9e-27, 37.8% id in 328 aa; LysR family transcriptional regulator complement(3493893..3494843) Burkholderia pseudomallei K96243 3094710 YP_109521.1 CDS BPSL2927 NC_006350.1 3495261 3496718 D Similar to Bacillus subtilis nitrate transporter NasA SWALL:NASA_BACSU (SWALL:P42432) (421 aa) fasta scores: E(): 3.2e-19, 34.09% id in 352 aa, and to Aquifex aeolicus nitrate transporter NasA or aq_215 SWALL:O66589 (EMBL:AE000678) (475 aa) fasta scores: E(): 2.3e-82, 53.53% id in 439 aa. Note: This CDS is longer in its N-terminal region than most of its database matches. It has an alternative start codon at residue 18; nitrate transporter 3495261..3496718 Burkholderia pseudomallei K96243 3092269 YP_109522.1 CDS purB NC_006350.1 3496763 3498214 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3496763..3498214 Burkholderia pseudomallei K96243 3093830 YP_109523.1 CDS BPSL2929 NC_006350.1 3498335 3498853 R Similar to Escherichia coli thermoresistant gluconokinase GntK or b3437 SWALL:GNTK_ECOLI (SWALL:P46859) (174 aa) fasta scores: E(): 1.9e-21, 43.31% id in 157 aa, and to Ralstonia solanacearum probable thermoresistant gluconokinase rsc0441 or rs04466 SWALL:Q8Y295 (EMBL:AL646059) (169 aa) fasta scores: E(): 2.1e-27, 49.68% id in 161 aa; thermoresistant gluconokinase complement(3498335..3498853) Burkholderia pseudomallei K96243 3092270 YP_109524.1 CDS BPSL2930 NC_006350.1 3498867 3500228 R Similar to Escherichia coli high-affinity gluconate transporter GntT or UsgA or GntM or b3415 SWALL:GNTT_ECOLI (SWALL:P39835) (437 aa) fasta scores: E(): 1.3e-68, 45.33% id in 450 aa, and to Pseudomonas aeruginosa gluconate permease pa2322 SWALL:GNUT_PSEAE (SWALL:Q9ZIJ1) (450 aa) fasta scores: E(): 4.7e-83, 52.53% id in 453 aa; gluconate permease complement(3498867..3500228) Burkholderia pseudomallei K96243 3092428 YP_109525.1 CDS eda NC_006350.1 3500448 3501077 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 KHG/KDPG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) (2-keto-4-hydroxyglutarate aldolase) (khg-aldolase); 2- dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) (phospho-2- dehydro-3-deoxygluconate aldolase) (phospho-2-keto-3-deoxygluconate aldolase) (2-keto-3-deoxy-6-phosphogluconate aldolase) (kdpg- aldolase)] Eda or Hga or KdgA or b1850 or c2263 or z2902 or ecs2560 SWALL:ALKH_ECOLI (SWALL:P10177) (213 aa) fasta scores: E(): 6.8e-31, 44.82% id in 203 aa, and to Neisseria meningitidis 2-keto-4-hydroxyglutarate aldolase Eda or nma1611 or nmb1394 SWALL:Q9JR44 (EMBL:AL162756) (212 aa) fasta scores: E(): 1.3e-35, 50.74% id in 201 aa; KHG/KDPG aldolase complement(3500448..3501077) Burkholderia pseudomallei K96243 3092733 YP_109526.1 CDS edd NC_006350.1 3501096 3502949 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(3501096..3502949) Burkholderia pseudomallei K96243 3093431 YP_109527.1 CDS BPSL2933 NC_006350.1 3503247 3504245 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5438 SWALL:Q9HTC8 (EMBL:AE004956) (293 aa) fasta scores: E(): 2.9e-39, 44.29% id in 289 aa, and to Escherichia coli hex regulon repressor HexR or b1853 SWALL:HEXR_ECOLI (SWALL:P46118) (289 aa) fasta scores: E(): 1.4e-32, 40.58% id in 276 aa; regulatory protein 3503247..3504245 Burkholderia pseudomallei K96243 3092429 YP_109528.1 CDS BPSL2934 NC_006350.1 3504716 3505138 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2740 or rs00114 SWALL:Q8XVT7 (EMBL:AL646071) (140 aa) fasta scores: E(): 3.1e-32, 62.85% id in 140 aa, and to Neisseria meningitidis conserved hypothetical inner membrane protein nma2177 SWALL:Q9JSR1 (EMBL:AL162758) (145 aa) fasta scores: E(): 2.9e-22, 48.25% id in 143 aa; hypothetical protein complement(3504716..3505138) Burkholderia pseudomallei K96243 3091653 YP_109529.2 CDS proA NC_006350.1 3505156 3506427 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3505156..3506427) Burkholderia pseudomallei K96243 3094010 YP_109530.1 CDS holA NC_006350.1 3506570 3507658 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3506570..3507658) Burkholderia pseudomallei K96243 3091654 YP_109531.1 CDS BPSL2937 NC_006350.1 3507704 3508255 R Similar to Escherichia coli, and Escherichia coli O6 rare lipoprotein B precursor RlpB or b0641 or c0732 SWALL:RLPB_ECOLI (SWALL:P10101) (193 aa) fasta scores: E(): 0.06, 26.45% id in 189 aa, and to Ralstonia solanacearum lipoprotein B transmembrane RlpB or rsc2743 or rs00111 SWALL:Q8XVT4 (EMBL:AL646071) (169 aa) fasta scores: E(): 8e-17, 43.29% id in 164 aa; lipoprotein complement(3507704..3508255) Burkholderia pseudomallei K96243 3094183 YP_109532.1 CDS leuS NC_006350.1 3508297 3510891 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(3508297..3510891) Burkholderia pseudomallei K96243 3094550 YP_109533.1 CDS BPSL2939 NC_006350.1 3511066 3511578 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 biopolymer transport ExbD protein or b3005 or c3740 or z4358 or ecs3889 SWALL:EXBD_ECOLI (SWALL:P18784) (141 aa) fasta scores: E(): 2.6e-06, 33.87% id in 124 aa, and to Xanthomonas campestris biopolymer transport ExbD1 protein or xcc0010 SWALL:EXB1_XANCP (SWALL:O34259) (140 aa) fasta scores: E(): 4.3e-11, 44.11% id in 136 aa. Note: This CDS is longer in its -terminal region than most of its database matches; transport-related membrane protein complement(3511066..3511578) Burkholderia pseudomallei K96243 3094184 YP_109534.1 CDS BPSL2940 NC_006350.1 3511619 3512326 R Similar to Neisseria meningitidis biopolymer transport protein ExbB or nma1984 or nmb1729 SWALL:EXBB_NEIMA (SWALL:P57027) (220 aa) fasta scores: E(): 3.1e-26, 46.19% id in 210 aa, and to Escherichia coli, and Escherichia coli O157:H7 TolQ protein or Fii or b0737 or z0905 or ecs0772 SWALL:TOLQ_ECOLI (SWALL:P05828) (230 aa) fasta scores: E(): 1.8e-13, 32.42% id in 219 aa; transport-related membrane protein complement(3511619..3512326) Burkholderia pseudomallei K96243 3093633 YP_109535.1 CDS dapB NC_006350.1 3512355 3513161 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(3512355..3513161) Burkholderia pseudomallei K96243 3094347 YP_109536.1 CDS omlA NC_006350.1 3513232 3514056 R Identical in its N-terminal region to Burkholderia pseudomallei outer membrane lipoprotein OmlA (Fragment) SWALL:Q9F9X1 (EMBL:AF153356) (133 aa) fasta scores: E(): 5.2e-31, 100% id in 133 aa, and simiar in its full length to Pseudomonas fluorescens outer membrane lipoprotein precursor OmlA or OprX SWALL:OMLA_PSEFL (SWALL:O68564) (175 aa) fasta scores: E(): 0.00012, 32.38% id in 176 aa; outer membrane protein complement(3513232..3514056) Burkholderia pseudomallei K96243 3093811 YP_109537.1 CDS fur NC_006350.1 3514171 3514599 D Previously sequenced as Burkholderia pseudomallei ferric uptake regulator Fur SWALL:Q9Z5Z9 (EMBL:AF117238) (142 aa) fasta scores: E(): 8.2e-57, 100% id in 142 aa. Highly similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ferric uptake regulation protein Fur or b0683 or c0770 or z0831 or ecs0714 SWALL:FUR_ECOLI (SWALL:P06975) (148 aa) fasta scores: E(): 8.1e-29, 55% id in 140 aa; ferric uptake regulator 3514171..3514599 Burkholderia pseudomallei K96243 3091814 YP_109538.1 CDS BPSL2944 NC_006350.1 3514736 3515260 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(3514736..3515260) Burkholderia pseudomallei K96243 3093634 YP_109539.1 CDS BPSL2945 NC_006350.1 3515274 3516284 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(3515274..3516284) Burkholderia pseudomallei K96243 3094036 YP_109540.1 CDS dctA NC_006350.1 3516422 3517744 R involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA complement(3516422..3517744) Burkholderia pseudomallei K96243 3094344 YP_109541.1 CDS BPSL2947 NC_006350.1 3517990 3518682 D Similar to Erwinia chrysanthemi exu regulon transcriptional regulator ExuR SWALL:EXUR_ERWCH (SWALL:Q9X9E0) (259 aa) fasta scores: E(): 1.8e-13, 31.79% id in 217 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2102 or rs01502 SWALL:Q8XXL1 (EMBL:AL646068) (254 aa) fasta scores: E(): 1.4e-17, 35.16% id in 236 aa; GntR family transcriptional regulator 3517990..3518682 Burkholderia pseudomallei K96243 3094037 YP_109542.1 CDS cynR NC_006350.1 3519305 3520240 R controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR complement(3519305..3520240) Burkholderia pseudomallei K96243 3092007 YP_109543.1 CDS cynT NC_006350.1 3520355 3521014 D Similar to Escherichia coli, and Escherichia coli O157:H7 carbonic anhydrase CynT or b0339 or z0435 or ecs0392 SWALL:CYNT_ECOLI (SWALL:P17582) (219 aa) fasta scores: E(): 4e-62, 72.6% id in 219 aa, and to Pseudomonas aeruginosa carbonate dehydratase pa2053 SWALL:Q9I262 (EMBL:AE004631) (220 aa) fasta scores: E(): 1e-60, 73.81% id in 210 aa; carbonic anhydrase 3520355..3521014 Burkholderia pseudomallei K96243 3092530 YP_109544.1 CDS cynS NC_006350.1 3521101 3521571 D catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 3521101..3521571 Burkholderia pseudomallei K96243 3092008 YP_109545.1 CDS BPSL2951 NC_006350.1 3521744 3522943 D Similar to Xanthomonas axonopodis MFS transporter xac0509 SWALL:AAM35398 (EMBL:AE011677) (396 aa) fasta scores: E(): 2e-57, 46.78% id in 389 aa, and to Escherichia coli hypothetical protein YgaY or b2680/b2681 SWALL:YGAY_ECOLI (SWALL:P76628) (394 aa) fasta scores: E(): 4.8e-54, 42.15% id in 389 aa; hypothetical protein 3521744..3522943 Burkholderia pseudomallei K96243 3092833 YP_109546.1 CDS gapA NC_006350.1 3523351 3524361 R Similar to Bacillus subtilis glyceraldehyde 3-phosphate dehydrogenase 1 AapA or Gap SWALL:G3P1_BACSU (SWALL:P09124) (334 aa) fasta scores: E(): 2.7e-71, 60.06% id in 333 aa, and to Alcaligenes eutrophus glyceraldehyde 3-phosphate dehydrogenase, plasmid CbbGP SWALL:G3PP_ALCEU (SWALL:P50322) (336 aa) fasta scores: E(): 5.1e-112, 84.52% id in 336 aa; glyceraldehyde 3-phosphate dehydrogenase 1 complement(3523351..3524361) Burkholderia pseudomallei K96243 3092714 YP_109547.1 CDS tktA NC_006350.1 3524452 3526479 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(3524452..3526479) Burkholderia pseudomallei K96243 3094803 YP_109548.1 CDS speE NC_006350.1 3526742 3527599 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3526742..3527599 Burkholderia pseudomallei K96243 3092834 YP_109549.1 CDS BPSL2955 NC_006350.1 3527639 3528055 D Similar to Mycobacterium tuberculosis hypothetical protein rv0887c or mt0910 or mtcy31.15C SWALL:Y887_MYCTU (SWALL:Q10548) (170 aa) fasta scores: E(): 7.2e-10, 33.84% id in 130 aa, and to Ralstonia solanacearum hypothetical protein rsc2762 or rs00092 SWALL:Q8XVR7 (EMBL:AL646071) (141 aa) fasta scores: E(): 1.3e-30, 59.39% id in 133 aa; glyoxalase/bleomycin resistance protein/dioxygenase 3527639..3528055 Burkholderia pseudomallei K96243 3094728 YP_109550.2 CDS BPSL2956 NC_006350.1 3528052 3528819 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3528052..3528819 Burkholderia pseudomallei K96243 3094729 YP_109551.1 CDS BPSL2957 NC_006350.1 3529221 3529784 R Similar to Ralstonia solanacearum hypothetical protein RSC2765 or RS00089 SWALL:Q8XVR4 (EMBL:AL646071) (198 aa) fasta scores: E(): 9e-39, 60.41% id in 192 aa. C-terminal region is similar to Xylella fastidiosa conserved hypothetical protein SWALL:Q87A41 (EMBL:AE012560) (138 aa) fasta scores: E(): 0.00017, 31.2% id in 125 aa. Possible alternative translational start site after codon 55; hypothetical protein complement(3529221..3529784) Burkholderia pseudomallei K96243 3094052 YP_109552.1 CDS BPSL2958 NC_006350.1 3529801 3530232 R Similar to Streptomyces aureofaciens guanyl-specific ribonuclease SA3 precursor RnaSA3 SWALL:RNS3_STRAU (SWALL:P30289) (141 aa) fasta scores: E(): 1.1e-14, 44.36% id in 133 aa, and to Ralstonia solanacearum probable guanyl-specific ribonuclease precursor signal peptide protein rsc2766 or rs00088 SWALL:Q8XVR3 (EMBL:AL646071) (143 aa) fasta scores: E(): 3.5e-21, 54.88% id in 133 aa; exported ribonuclease complement(3529801..3530232) Burkholderia pseudomallei K96243 3094053 YP_109553.1 CDS maeB NC_006350.1 3530561 3532870 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(3530561..3532870) Burkholderia pseudomallei K96243 3093937 YP_109554.1 CDS BPSL2960 NC_006350.1 3533072 3534073 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3533072..3534073 Burkholderia pseudomallei K96243 3093144 YP_109555.1 CDS BPSL2961 NC_006350.1 3534207 3534680 D Similar to Escherichia coli phosphatidylglycerophosphatase A PgpA or b0418 SWALL:PGPA_ECOLI (SWALL:P18200) (172 aa) fasta scores: E(): 7.2e-20, 40.97% id in 144 aa, and to Ralstonia solanacearum probable phosphatidyl-glycerophosphatase hydrolase transmembrane protein rsc2769 or rs00078 SWALL:Q8XVR0 (EMBL:AL646071) (174 aa) fasta scores: E(): 4.8e-35, 56.32% id in 158 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; phosphatidylglycerophosphatase 3534207..3534680 Burkholderia pseudomallei K96243 3093145 YP_109556.1 CDS BPSL2962 NC_006350.1 3534724 3535224 D Similar to Escherichia coli, and Escherichia coli O6 protein YgaD or b2700 or c3254 SWALL:YGAD_ECOLI (SWALL:P41053) (165 aa) fasta scores: E(): 1.1e-26, 54.48% id in 156 aa, and to Ralstonia solanacearum hypothetical protein rsc2770 or rs00077 SWALL:Q8XVQ9 (EMBL:AL646071) (166 aa) fasta scores: E(): 1.7e-37, 65.45% id in 165 aa; competence-damaged-like protein 3534724..3535224 Burkholderia pseudomallei K96243 3093382 YP_109557.1 CDS pyrF NC_006350.1 3535507 3536334 R OMP decarboxylase; OMPDCase; OMPdecase; type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3535507..3536334) Burkholderia pseudomallei K96243 3093383 YP_109558.1 CDS BPSL2964 NC_006350.1 3536431 3537414 R Similar to Ralstonia solanacearum hypothetical protein rsc2754 or rs00100 SWALL:Q8XVS5 (EMBL:AL646071) (296 aa) fasta scores: E(): 9.1e-52, 49.31% id in 292 aa, and to Rhizobium loti hypothetical protein mlr7196 SWALL:Q986V3 (EMBL:AP003011) (308 aa) fasta scores: E(): 4.7e-33, 35.83% id in 293 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; epimerase complement(3536431..3537414) Burkholderia pseudomallei K96243 3092985 YP_109559.1 CDS BPSL2965 NC_006350.1 3537551 3538357 R Similar to Pseudomonas paucimobilis 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX SWALL:LINX_PSEPA (SWALL:P50198) (250 aa) fasta scores: E(): 3.4e-20, 34.41% id in 247 aa, and to Rhizobium meliloti probable oxidoreductase r00826 or smc00880 SWALL:Q92RN6 (EMBL:AL591785) (256 aa) fasta scores: E(): 5.6e-39, 48.19% id in 249 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; dehydrogenase complement(3537551..3538357) Burkholderia pseudomallei K96243 3092986 YP_109560.1 CDS araH NC_006350.1 3538396 3539400 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease complement(3538396..3539400) Burkholderia pseudomallei K96243 3094069 YP_109561.2 CDS araG NC_006350.1 3539515 3541026 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(3539515..3541026) Burkholderia pseudomallei K96243 3094068 YP_109562.1 CDS BPSL2968 NC_006350.1 3541115 3542110 R Similar to Ralstonia solanacearum probable L-arabinose-binding periplasmic rsc2758 or rs00096 SWALL:Q8XVS1 (EMBL:AL646071) (331 aa) fasta scores: E(): 1.5e-86, 71.56% id in 327 aa, and to Escherichia coli L-arabinose-binding periplasmic protein precursor AraF or b1901 SWALL:ARAF_ECOLI (SWALL:P02924) (329 aa) fasta scores: E(): 5.3e-57, 48.93% id in 327 aa; L-arabinose transport system, exported protein complement(3541115..3542110) Burkholderia pseudomallei K96243 3092606 YP_109563.1 CDS BPSL2969 NC_006350.1 3542240 3543019 R Similar to Rhizobium loti probable oxidoreductase mll7083 SWALL:Q987E5 (EMBL:AP003010) (258 aa) fasta scores: E(): 1.8e-54, 61.86% id in 257 aa, and to Escherichia coli oxidoreductase UcpA or b2426 SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 1.6e-27, 40% id in 260 aa; short chain dehydrogenase complement(3542240..3543019) Burkholderia pseudomallei K96243 3092607 YP_109564.1 CDS BPSL2970 NC_006350.1 3543016 3543645 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(3543016..3543645) Burkholderia pseudomallei K96243 3093435 YP_109565.1 CDS BPSL2971 NC_006350.1 3543743 3544756 R Similar to Rhizobium meliloti 2-dehydro-3-deoxygalactonokinase ra0372 or sma0705 SWALL:Q92ZS7 (EMBL:AE007229) (324 aa) fasta scores: E(): 8.4e-24, 38.22% id in 327 aa, and to Escherichia coli 2-dehydro-3-deoxygalactonokinase DgoK or b3693 SWALL:DGOK_ECOLI (SWALL:P31459) (292 aa) fasta scores: E(): 1.3e-09, 34.16% id in 319 aa; galactonokinase complement(3543743..3544756) Burkholderia pseudomallei K96243 3093436 YP_109566.1 CDS BPSL2972 NC_006350.1 3544753 3545670 R Similar to Escherichia coli transcriptional regulator KdgR or b1827 SWALL:KDGR_ECOLI (SWALL:P76268) (263 aa) fasta scores: E(): 6.3e-18, 33.46% id in 263 aa, and CFT073 transcriptional regulator c4779 SWALL:AAN83212 (EMBL:AE016770) (284 aa) fasta scores: E(): 1.2e-27, 56.64% id in 256 aa; IclR family transcriptional regulator complement(3544753..3545670) Burkholderia pseudomallei K96243 3093994 YP_109567.1 CDS BPSL2973 NC_006350.1 3545935 3546366 R hypothetical protein complement(3545935..3546366) Burkholderia pseudomallei K96243 3093995 YP_109568.1 CDS BPSL2974 NC_006350.1 3546427 3548061 R Similar to Ralstonia solanacearum probable carboxypeptidase rsc1003 or rs04289 SWALL:Q8Y0P0 (EMBL:AL646062) (543 aa) fasta scores: E(): 1.1e-50, 40.29% id in 546 aa, and to Caulobacter crescentus hypothetical protein cc3418 SWALL:Q9A2Y8 (EMBL:AE006002) (504 aa) fasta scores: E(): 1.8e-19, 30.4% id in 546 aa; lipoprotein complement(3546427..3548061) Burkholderia pseudomallei K96243 3092542 YP_109569.1 CDS mtgA NC_006350.1 3548521 3549291 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(3548521..3549291) Burkholderia pseudomallei K96243 3092543 YP_109570.1 CDS aroE NC_006350.1 3549312 3550190 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3549312..3550190) Burkholderia pseudomallei K96243 3093727 YP_109571.1 CDS BPSL2977 NC_006350.1 3550187 3552265 R Similar to Escherichia coli exoribonuclease II Rnb or b1286 SWALL:RNB_ECOLI (SWALL:P30850) (644 aa) fasta scores: E(): 2e-08, 28.45% id in 355 aa, and to Neisseria meningitidis ribonuclease II-related protein nmb0282 SWALL:Q9K185 (EMBL:AE002385) (626 aa) fasta scores: E(): 2.2e-64, 39.9% id in 644 aa; exoribonuclease II complement(3550187..3552265) Burkholderia pseudomallei K96243 3093843 YP_109572.1 CDS BPSL2978 NC_006350.1 3552389 3552958 R Similar to Ralstonia solanacearum hypothetical protein rsc2781 or rs00066 SWALL:Q8XVP9 (EMBL:AL646071) (210 aa) fasta scores: E(): 2.7e-47, 66.48% id in 188 aa, and to Vibrio cholerae hypothetical protein vc2432 SWALL:Q9KPD8 (EMBL:AE004313) (195 aa) fasta scores: E(): 2.9e-19, 38.5% id in 187 aa; hypothetical protein complement(3552389..3552958) Burkholderia pseudomallei K96243 3093844 YP_109573.1 CDS mpl NC_006350.1 3552955 3554439 R Similar to Escherichia coli UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diamino pimelate ligase Mpl or b4233 SWALL:MPL_ECOLI (SWALL:P37773) (457 aa) fasta scores: E(): 5.9e-102, 59.05% id in 464 aa, and to Ralstonia solanacearum probable UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein mpl or rsc2782 or rs00065 SWALL:Q8XVP8 (EMBL:AL646071) (461 aa) fasta scores: E(): 2.2e-136, 76.18% id in 466 aa. Note: This CDS has an alternative start codon at residue 25; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- me so-diaminopimelate ligase complement(3552955..3554439) Burkholderia pseudomallei K96243 3091976 YP_109574.1 CDS BPSL2980 NC_006350.1 3554561 3555217 D Similar to Ralstonia solanacearum hypothetical protein rsc2783 or rs00064 SWALL:Q8XVP7 (EMBL:AL646071) (224 aa) fasta scores: E(): 1e-40, 60.18% id in 221 aa, and to Xanthomonas axonopodis hypothetical protein xac3387 SWALL:AAM38230 (EMBL:AE011985) (216 aa) fasta scores: E(): 2.8e-10, 35.09% id in 208 aa; hypothetical protein 3554561..3555217 Burkholderia pseudomallei K96243 3093461 YP_109575.1 CDS BPSL2981 NC_006350.1 3555288 3555770 D Similar to Chlorobium limicola thioredoxin SoxW SWALL:Q8RLW7 (EMBL:AY074395) (185 aa) fasta scores: E(): 9.4e-10, 34.41% id in 154 aa, and to Ralstonia solanacearum thioredoxin-related transmembrane protein rsc2784 or rs00063 SWALL:Q8XVP6 (EMBL:AL646071) (174 aa) fasta scores: E(): 4.3e-25, 49.66% id in 151 aa; thioredoxin-like protein 3555288..3555770 Burkholderia pseudomallei K96243 3093462 YP_109576.1 CDS aroQ1 NC_006350.1 3555966 3556418 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3555966..3556418 Burkholderia pseudomallei K96243 3094027 YP_109577.1 CDS accB NC_006350.1 3556486 3556959 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3556486..3556959 Burkholderia pseudomallei K96243 3092969 YP_109578.1 CDS accC NC_006350.1 3557044 3558411 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3557044..3558411 Burkholderia pseudomallei K96243 3093093 YP_109579.1 CDS prmA NC_006350.1 3558414 3559316 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 3558414..3559316 Burkholderia pseudomallei K96243 3092248 YP_109580.1 CDS BPSL2986 NC_006350.1 3559364 3560773 D Low similarity to Ralstonia solanacearum probable transmembrane protein rsc2789 or rs00058 SWALL:Q8XVP1 (EMBL:AL646071) (473 aa) fasta scores: E(): 8.3e-20, 31.02% id in 490 aa; hypothetical protein 3559364..3560773 Burkholderia pseudomallei K96243 3093472 YP_109581.1 CDS tpx NC_006350.1 3560841 3561344 D Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella dysenteriae thiol peroxidase Tpx or b1324 or c1796 or z2452 or ecs1903 SWALL:TPX_ECOLI (SWALL:P37901) (167 aa) fasta scores: E(): 5.7e-36, 62.19% id in 164 aa, and to Ralstonia solanacearum probable thiol peroxidase rsc2790 or rs00057 SWALL:TPX_RALSO (SWALL:Q8XVP0) (166 aa) fasta scores: E(): 1.1e-42, 71.25% id in 167 aa; thiol peroxidase 3560841..3561344 Burkholderia pseudomallei K96243 3092953 YP_109582.1 CDS BPSL2988 NC_006350.1 3561445 3562383 D Similar to Bacillus subtilis ribokinase RbsK SWALL:RBSK_BACSU (SWALL:P36945) (293 aa) fasta scores: E(): 7.6e-08, 26.33% id in 262 aa, and to Ralstonia solanacearum sugar kinase transferase rsc2791 or rs00056 SWALL:Q8XVN9 (EMBL:AL646071) (311 aa) fasta scores: E(): 3.9e-78, 64.19% id in 310 aa; sugar kinase 3561445..3562383 Burkholderia pseudomallei K96243 3093473 YP_109583.1 CDS BPSL2989 NC_006350.1 3562407 3562880 D Similar to Yersinia enterocolitica outer membrane lipoprotein precursor Pcp or PcpY SWALL:PCP_YEREN (SWALL:P31484) (155 aa) fasta scores: E(): 2.4e-12, 40.94% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 outer membrane lipoprotein slyb precursor SlyB or b1641 or z2655 or ecs2350 SWALL:SLYB_ECOLI (SWALL:P55741) (155 aa) fasta scores: E(): 1.3e-10, 36.87% id in 141 aa; lipoprotein 3562407..3562880 Burkholderia pseudomallei K96243 3091739 YP_109584.1 CDS hctB NC_006350.1 3563128 3563709 R Similar to Chlamydia trachomatis histone H1-like protein HC2 HctB SWALL:HC2X_CHLTR (SWALL:Q46397) (221 aa) fasta scores: E(): 2.8e-13, 50.5% id in 200 aa, and to Bordetella pertussis histone H1 SWALL:Q45370 (EMBL:L37438) (182 aa) fasta scores: E(): 7.5e-21, 64.61% id in 195 aa; histone H1-like protein complement(3563128..3563709) Burkholderia pseudomallei K96243 3092482 YP_109585.1 CDS nrdB NC_006350.1 3564144 3565196 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(3564144..3565196) Burkholderia pseudomallei K96243 3093394 YP_109586.1 CDS BPSL2992 NC_006350.1 3565723 3568710 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(3565723..3568710) Burkholderia pseudomallei K96243 3091740 YP_109587.1 CDS ampD NC_006350.1 3569181 3569771 R Similar to Escherichia coli N-acetylmuramyl-L-alanine amidase AmpD or b0110 SWALL:AMPD_ECOLI (SWALL:P13016) (183 aa) fasta scores: E(): 1.2e-39, 59.88% id in 172 aa, and to Ralstonia solanacearum N-acetylmuramyl-L-alanine amidase rsc2806 or rs00299 SWALL:Q8XVM4 (EMBL:AL646072) (200 aa) fasta scores: E(): 7.8e-50, 61.25% id in 191 aa; N-acetyl-anhydromuranmyl-L-alanine amidase complement(3569181..3569771) Burkholderia pseudomallei K96243 3094504 YP_109588.1 CDS BPSL2993a NC_006350.1 3569768 3570088 R Weakly similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2809 rsc2809 or rs00296 SWALL:Q8XVM1 (EMBL:AL646072) (86 aa) fasta scores: E(): 2, 32.07% id in 106 aa. C-terminal region is similar to the C-terminus of Pseudomonas putida conserved hypothetical protein pp0621 SWALL:Q88Q74 (EMBL:AE016776) (103 aa) fasta scores: E(): 0.043, 42.59% id in 54 aa; hypothetical protein complement(3569768..3570088) Burkholderia pseudomallei K96243 3091558 YP_109589.1 CDS BPSL2994 NC_006350.1 3570102 3571001 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2810 or rs00295 SWALL:Q8XVM0 (EMBL:AL646072) (303 aa) fasta scores: E(): 4.5e-64, 61.41% id in 311 aa, and to Neisseria meningitidis hypothetical inner membrane protein nma2189 SWALL:Q9JSQ1 (EMBL:AL162758) (268 aa) fasta scores: E(): 3e-17, 38.04% id in 297 aa; hypothetical protein complement(3570102..3571001) Burkholderia pseudomallei K96243 3091559 YP_109590.1 CDS ffh NC_006350.1 3571089 3572456 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 signal recognition particle protein Ffh or b2610 or c3131 or z3904 or ecs3473 SWALL:SR54_ECOLI (SWALL:P07019) (453 aa) fasta scores: E(): 1.6e-95, 65.26% id in 452 aa, and to Ralstonia solanacearum signal recognition particle protein rsc2811 or rs00294 SWALL:Q8XVL9 (EMBL:AL646072) (476 aa) fasta scores: E(): 2.2e-101, 80.88% id in 476 aa; signal recognition particle protein 3571089..3572456 Burkholderia pseudomallei K96243 3092670 YP_109591.1 CDS BPSL2996 NC_006350.1 3572554 3573105 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 3572554..3573105 Burkholderia pseudomallei K96243 3094711 YP_109592.1 CDS BPSL2997 NC_006350.1 3573296 3573898 R Similar to Ralstonia solanacearum probable transmembrane protein rsc2813 or rs00292 SWALL:Q8XVL7 (EMBL:AL646072) (197 aa) fasta scores: E(): 3.3e-48, 71.5% id in 200 aa, and to Xylella fastidiosa hypothetical protein xf2666 SWALL:Q9PA54 (EMBL:AE004072) (198 aa) fasta scores: E(): 4.4e-29, 48.43% id in 192 aa; MarC family integral membrane protein complement(3573296..3573898) Burkholderia pseudomallei K96243 3094712 YP_109593.1 CDS proS NC_006350.1 3573930 3575666 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3573930..3575666) Burkholderia pseudomallei K96243 3091660 YP_109594.1 CDS BPSL2999 NC_006350.1 3575884 3576534 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3575884..3576534 Burkholderia pseudomallei K96243 3092881 YP_109595.1 CDS BPSL3000 NC_006350.1 3576590 3577177 D Similar to Ralstonia solanacearum lipoprotein rsc2818 or rs00287 SWALL:Q8XVL2 (EMBL:AL646072) (213 aa) fasta scores: E(): 7.4e-16, 42.38% id in 151 aaWeakly similar to Neisseria meningitidis periplasmic protein nma0881 SWALL:Q9JVD8 (EMBL:AL162754) (203 aa) fasta scores: E(): 0.0044, 27.66% id in 188 aa; lipoprotein 3576590..3577177 Burkholderia pseudomallei K96243 3092882 YP_109596.1 CDS BPSL3001 NC_006350.1 3577395 3578858 R Similar to Thermoanaerobacter tengcongensis transposase TTE0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 3.4e-74, 43.76% id in 457 aa, and to Pseudomonas sp. transposase TnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 1.4e-32, 30.96% id in 478 aa; transposase complement(3577395..3578858) Burkholderia pseudomallei K96243 3092861 YP_109597.1 CDS proB NC_006350.1 3578983 3580101 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3578983..3580101) Burkholderia pseudomallei K96243 3091659 YP_109598.1 CDS obgE NC_006350.1 3580186 3581304 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3580186..3581304) Burkholderia pseudomallei K96243 3092862 YP_109599.1 CDS rpmA NC_006350.1 3581489 3581752 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3581489..3581752) Burkholderia pseudomallei K96243 3091810 YP_109600.1 CDS rplU NC_006350.1 3581781 3582092 R Similar to Escherichia coli 50S ribosomal protein L21 RplU or b3186 or z4549 or ecs4065 SWALL:RL21_ECOLI (SWALL:P02422) (103 aa) fasta scores: E(): 1.7e-14, 43.68% id in 103 aa; 50S ribosomal protein L21 complement(3581781..3582092) Burkholderia pseudomallei K96243 3093772 YP_109601.1 CDS ispB NC_006350.1 3582308 3583306 D Similar to Escherichia coli octaprenyl-diphosphate synthase IspB or Cel or b3187 SWALL:ISPB_ECOLI (SWALL:P19641) (323 aa) fasta scores: E(): 9.1e-60, 51.12% id in 311 aa; octaprenyl-diphosphate synthase 3582308..3583306 Burkholderia pseudomallei K96243 3092512 YP_109602.1 CDS BPSL3007 NC_006350.1 3583587 3584882 D Similar to Ralstonia solanacearum probable transmembrane protein Rsc2824 or Rs00236 SWALL:Q8XVK6 (EMBL:AL646072) (425 aa) fasta scores: E(): 3.4e-98, 59.71% id in 422 aa, and to Escherichia coli hypothetical protein YfjD or b2612/b2613 SWALL:YFJD_ECOLI (SWALL:P37908) (428 aa) fasta scores: E(): 1.4e-58, 37.73% id in 424 aa; hypothetical protein 3583587..3584882 Burkholderia pseudomallei K96243 3092385 YP_109603.1 CDS BPSL3008 NC_006350.1 3584982 3586241 D Similar to Aeromonas hydrophila type IV pilus assembly protein TapB SWALL:TAPB_AERHY (SWALL:P45792) (568 aa) fasta scores: E(): 1.3e-64, 51.04% id in 382 aa; type IV pilus assembly protein 3584982..3586241 Burkholderia pseudomallei K96243 3092386 YP_109604.1 CDS pilC NC_006350.1 3586238 3587455 D Similar to Burkholderia pseudomallei pilus assembly protein PilC SWALL:Q9ZF71 (EMBL:AF110186) (186 aa) fasta scores: E(): 6e-62, 98.92% id in 186 aa, and to Aeromonas hydrophila type IV pilus assembly protein TapC SWALL:TAPC_AERHY (SWALL:P45793) (413 aa) fasta scores: E(): 1e-44, 35.85% id in 396 aa; type IV pilus assembly protein PilC 3586238..3587455 Burkholderia pseudomallei K96243 3093315 YP_109605.1 CDS gspO NC_006350.1 3587485 3588414 D Previously characterised as Burkholderia pseudomallei type IV prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase (EC 3.4.23.43) (prepilin peptidase); N- methyltransferase (EC 2.1.1.-)] GspO SWALL:LEP4_BURPS (SWALL:Q9ZF70) (275 aa) fasta scores: E(): 5.9e-105, 99.27% id in 275 aa; type IV prepilin leader peptide type M1 3587485..3588414 Burkholderia pseudomallei K96243 3093631 YP_109606.1 CDS coaE NC_006350.1 3588418 3589029 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3588418..3589029 Burkholderia pseudomallei K96243 3094796 YP_109607.1 CDS BPSL3012 NC_006350.1 3589178 3589933 D Similar to Ralstonia solanacearum hypothetical protein Rsc2829 or Rs00276 SWALL:Q8XVK1 (EMBL:AL646072) (252 aa) fasta scores: E(): 5.7e-71, 71.42% id in 252 aa, and to Escherichia coli hypothetical protein YacF or b0102 SWALL:YACF_ECOLI (SWALL:P36680) (247 aa) fasta scores: E(): 3.9e-21, 32.28% id in 254 aa; hypothetical protein 3589178..3589933 Burkholderia pseudomallei K96243 3092347 YP_109608.1 CDS BPSL3012a NC_006350.1 3589969 3590172 D Similar to Ralstonia solanacearum hypothetical zinc-binding upf0243 protein rsc2830 or rs00275 SWALL:YS30_RALSO (SWALL:Q8XVK0) (71 aa) fasta scores: E(): 4.5e-13, 58.73% id in 63 aa, and to Neisseria gonorrhoeae hypothetical zinc-binding upf0243 protein SWALL:YPIL_NEIGO (SWALL:Q50961) (69 aa) fasta scores: E(): 2.5e-10, 55.93% id in 59 aa; hypothetical protein 3589969..3590172 Burkholderia pseudomallei K96243 3092348 YP_109609.1 CDS BPSL3013 NC_006350.1 3590308 3590757 R Similar to Escherichia coli mutator MutT protein or b0099 SWALL:MUTT_ECOLI (SWALL:P08337) (129 aa) fasta scores: E(): 5.8e-11, 34.64% id in 127 aa, and to Escherichia coli CTP pyrophosphohydrolase NudG or b1759 SWALL:NUDG_ECOLI (SWALL:P77788) (135 aa) fasta scores: E(): 4.7e-09, 38.71% id in 124 aa; NUDIX hydrolase complement(3590308..3590757) Burkholderia pseudomallei K96243 3092228 YP_109610.1 CDS BPSL3014 NC_006350.1 3590754 3591623 R Similar to Ralstonia solanacearum hypothetical protein Rsc2832 or Rs00273 SWALL:Q8XVJ8 (EMBL:AL646072) (294 aa) fasta scores: E(): 1.3e-80, 77.14% id in 280 aa; hypothetical protein complement(3590754..3591623) Burkholderia pseudomallei K96243 3092229 YP_109611.1 CDS argJ NC_006350.1 3591644 3592885 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(3591644..3592885) Burkholderia pseudomallei K96243 3092555 YP_109612.1 CDS secA NC_006350.1 3593040 3595835 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(3593040..3595835) Burkholderia pseudomallei K96243 3091641 YP_109613.1 CDS BPSL3017 NC_006350.1 3596439 3596918 D Similar to Ralstonia solanacearum hypothetical protein Rsc2836 or Rs00269 SWALL:Q8XVJ4 (EMBL:AL646072) (195 aa) fasta scores: E(): 1.2e-10, 38.6% id in 158 aa; hypothetical protein 3596439..3596918 Burkholderia pseudomallei K96243 3091580 YP_109614.1 CDS lpxC NC_006350.1 3597311 3598228 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3597311..3598228) Burkholderia pseudomallei K96243 3093106 YP_109615.1 CDS BPSL3019 NC_006350.1 3598470 3598976 R Similar to Populus tremula x Populus tremuloides peroxiredoxin SWALL:Q8S3L0 (EMBL:AF483268) (162 aa) fasta scores: E(): 7.5e-26, 47.87% id in 165 aa, and to Brassica rapa subsp. pekinensis type 2 peroxiredoxin PrxII SWALL:Q9XF72 (EMBL:AF133302) (162 aa) fasta scores: E(): 2.2e-24, 45.45% id in 165 aa; redoxin complement(3598470..3598976) Burkholderia pseudomallei K96243 3091581 YP_109616.1 CDS ftsZ NC_006350.1 3599162 3600358 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(3599162..3600358) Burkholderia pseudomallei K96243 3092827 YP_109617.1 CDS ftsA NC_006350.1 3600467 3601699 R Similar to Escherichia coli cell division protein FtsA or DivA or b0094 or z0104 or ecs0098 SWALL:FTSA_ECOLI (SWALL:P06137) (420 aa) fasta scores: E(): 2.2e-62, 46.86% id in 414 aa; cell division protein FtsA complement(3600467..3601699) Burkholderia pseudomallei K96243 3093402 YP_109618.1 CDS ftsQ NC_006350.1 3601726 3602478 R Similar to Escherichia coli cell division protein FtsQ or b0093 SWALL:FTSQ_ECOLI (SWALL:P06136) (276 aa) fasta scores: E(): 1.6e-18, 30.33% id in 211 aa, and to Ralstonia solanacearum cell division transmembrane protein FtsQ or Rsc2841 or Rs00264 SWALL:Q8XVJ0 (EMBL:AL646072) (299 aa) fasta scores: E(): 1.9e-56, 55.85% id in 256 aa; cell division protein FtsQ complement(3601726..3602478) Burkholderia pseudomallei K96243 3094513 YP_109619.1 CDS ddl NC_006350.1 3602499 3603437 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(3602499..3603437) Burkholderia pseudomallei K96243 3093437 YP_109620.1 CDS murC NC_006350.1 3603439 3604836 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(3603439..3604836) Burkholderia pseudomallei K96243 3091555 YP_109621.1 CDS murG NC_006350.1 3604833 3605936 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(3604833..3605936) Burkholderia pseudomallei K96243 3094394 YP_109622.1 CDS ftsW NC_006350.1 3606058 3607350 R Similar to Escherichia coli cell division protein FtsW or b0089 or z0099 or ecs0093 SWALL:FTSW_ECOLI (SWALL:P16457) (414 aa) fasta scores: E(): 1.5e-60, 43% id in 386 aa; cell division protein FtsW complement(3606058..3607350) Burkholderia pseudomallei K96243 3094514 YP_109623.2 CDS murD NC_006350.1 3607347 3608861 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3607347..3608861) Burkholderia pseudomallei K96243 3094390 YP_109624.1 CDS mraY NC_006350.1 3608887 3610056 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3608887..3610056) Burkholderia pseudomallei K96243 3094816 YP_109625.1 CDS murF NC_006350.1 3610071 3611477 R Similar to Escherichia coli UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-- D-alanyl-D-alanyl ligase MurF or Mra or b0086 SWALL:MURF_ECOLI (SWALL:P11880) (452 aa) fasta scores: E(): 5.6e-47, 40.7% id in 457 aa; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanyl ligase complement(3610071..3611477) Burkholderia pseudomallei K96243 3093587 YP_109626.1 CDS murE NC_006350.1 3611474 3613018 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(3611474..3613018) Burkholderia pseudomallei K96243 3094391 YP_109627.1 CDS ftsI NC_006350.1 3613015 3614859 R Similar to Escherichia coli peptidoglycan synthetase FtsI or PbpB or b0084 or z0094 or ecs0088 SWALL:FTSI_ECOLI (SWALL:P04286) (588 aa) fasta scores: E(): 2.5e-72, 42.08% id in 556 aa; peptidoglycan synthetase FtsI complement(3613015..3614859) Burkholderia pseudomallei K96243 3094517 YP_109628.1 CDS ftsL NC_006350.1 3614856 3615185 R Similar to Escherichia coli cell division protein FtsL or MraR or b0083 or z0093 or ecs0087 SWALL:FTSL_ECOLI (SWALL:P22187) (121 aa) fasta scores: E(): 2.3, 27.02% id in 74 aa, and to Ralstonia solanacearum probable cell division ftsl transmembrane protein FtsI or Rsc2851 or Rs00254 SWALL:Q8XVI0 (EMBL:AL646072) (108 aa) fasta scores: E(): 3e-13, 50% id in 108 aa; cell division protein FtsL complement(3614856..3615185) Burkholderia pseudomallei K96243 3092169 YP_109629.1 CDS mraW NC_006350.1 3615182 3616123 R Similar to Escherichia coli S-adenosyl-methyltransferase MraW or b0082 or z0092 or ecs0086 SWALL:MRAW_ECOLI (SWALL:P18595) (313 aa) fasta scores: E(): 2.4e-60, 54.14% id in 314 aa; S-adenosyl-methyltransferase MraW complement(3615182..3616123) Burkholderia pseudomallei K96243 3091977 YP_109630.1 CDS mraZ NC_006350.1 3616147 3616575 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(3616147..3616575) Burkholderia pseudomallei K96243 3091938 YP_109631.1 CDS BPSL3035 NC_006350.1 3616964 3617590 R Similar to Ralstonia solanacearum hypothetical protein Rsc2854 or Rs00251 SWALL:Q8XVH7 (EMBL:AL646072) (211 aa) fasta scores: E(): 7.9e-49, 63.5% id in 211 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0655 SWALL:Q9I5R6 (EMBL:AE004500) (215 aa) fasta scores: E(): 1.2e-32, 47.34% id in 207 aa; hypothetical protein complement(3616964..3617590) Burkholderia pseudomallei K96243 3094287 YP_109632.1 CDS BPSL3036 NC_006350.1 3617871 3619031 D Similar to Burkholderia cepacia Opcp1 porin SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1.2e-35, 45.89% id in 390 aa, and to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 1.4e-16, 32.26% id in 406 aa; outer membrane porin 3617871..3619031 Burkholderia pseudomallei K96243 3094288 YP_109633.1 CDS fadD NC_006350.1 3619267 3620940 R activates fatty acids by binding to coenzyme A; Long-chain-fatty-acid--CoA ligase complement(3619267..3620940) Burkholderia pseudomallei K96243 3094304 YP_109634.1 CDS BPSL3038 NC_006350.1 3621080 3623155 R Similar to Ralstonia solanacearum hypothetical oxidoreductase Rsc2859 or Rs00246 SWALL:Q8XVH2 (EMBL:AL646072) (698 aa) fasta scores: E(): 5e-202, 69.66% id in 689 aa, and to Escherichia coli formate dehydrogenase H FdhF or b4079 SWALL:FDHF_ECOLI (SWALL:P07658) (715 aa) fasta scores: E(): 4.8e-32, 27.15% id in 718 aa; molybdopterin-containing oxidoreductase complement(3621080..3623155) Burkholderia pseudomallei K96243 3092380 YP_109635.1 CDS paaF NC_006350.1 3629441 3630235 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3629441..3630235) Burkholderia pseudomallei K96243 3092157 YP_109636.1 CDS paaZ NC_006350.1 3630348 3632054 D Similar to Azoarcus evansii PaaZ SWALL:Q9F9V2 (EMBL:AF176259) (562 aa) fasta scores: E(): 2.4e-118, 58.43% id in 551 aa, and to Streptomyces coelicolor dehydrogenase SCO3835 or SCH69.05 SWALL:Q9XA29 (EMBL:AL079308) (563 aa) fasta scores: E(): 1.3e-114, 56.11% id in 556 aa, and to Azoarcus evansii ring opening enzyme PacL SWALL:Q9FA63 (EMBL:AJ278756) (483 aa) fasta scores: E(): 7.1e-80, 52.86% id in 524 aa; phenylacetic acid degradation oxidoreductase 3630348..3632054 Burkholderia pseudomallei K96243 3092152 YP_109637.1 CDS paaJ NC_006350.1 3632128 3633345 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 3632128..3633345 Burkholderia pseudomallei K96243 3093770 YP_109638.1 CDS paaG NC_006350.1 3633441 3634232 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3633441..3634232 Burkholderia pseudomallei K96243 3092158 YP_109639.1 CDS paaI NC_006350.1 3634318 3634710 D Similar to Escherichia coli phenylacetic acid degradation protein PaaI or b1396 SWALL:PAAI_ECOLI (SWALL:P76084) (140 aa) fasta scores: E(): 1.2e-22, 48.8% id in 125 aa; phenylacetic acid degradation protein PaaI 3634318..3634710 Burkholderia pseudomallei K96243 3093769 YP_109640.1 CDS paaA NC_006350.1 3634748 3636046 D Similar to Escherichia coli phenylacetate-coenzyme A ligase PaaK or b1398 SWALL:PAAK_ECOLI (SWALL:P76085) (437 aa) fasta scores: E(): 5.2e-108, 65.12% id in 433 aa; phenylacetate-coenzyme A ligase 3634748..3636046 Burkholderia pseudomallei K96243 3093539 YP_109641.1 CDS BPSL3046 NC_006350.1 3636374 3637492 R Similar to Escherichia coli membrane-bound lytic murein transglycosylase A MltA or Mlt or b2813 or z4130 or ecs3673 SWALL:MLTA_ECOLI (SWALL:P46885) (365 aa) fasta scores: E(): 3e-23, 34.52% id in 307 aa, and to Ralstonia solanacearum membrane-bound lytic murein transglycosylase A transmembrane protein Rsc2876 or Rs00226 SWALL:Q8XVF5 (EMBL:AL646072) (380 aa) fasta scores: E(): 3e-78, 59.28% id in 334 aa; outer membrane-bound lytic murein transglycosylase complement(3636374..3637492) Burkholderia pseudomallei K96243 3092381 YP_109642.1 CDS apaG NC_006350.1 3637709 3638083 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(3637709..3638083) Burkholderia pseudomallei K96243 3091750 YP_109643.1 CDS BPSL3048 NC_006350.1 3638220 3638951 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 3638220..3638951 Burkholderia pseudomallei K96243 3091751 YP_109644.1 CDS BPSL3049 NC_006350.1 3638948 3639685 D Similar to Alcaligenes eutrophus phosphoglycolate phosphatase, chromosomal SWALL:GPHC_ALCEU (SWALL:P40852) (231 aa) fasta scores: E(): 2.4e-24, 40.61% id in 229 aa; hydrolase 3638948..3639685 Burkholderia pseudomallei K96243 3092938 YP_109645.1 CDS trpE NC_006350.1 3640048 3641541 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 3640048..3641541 Burkholderia pseudomallei K96243 3092035 YP_109646.1 CDS trpG NC_006350.1 3641555 3642145 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 3641555..3642145 Burkholderia pseudomallei K96243 3092485 YP_109647.1 CDS trpD NC_006350.1 3642163 3643194 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 3642163..3643194 Burkholderia pseudomallei K96243 3092691 YP_109648.1 CDS trpC NC_006350.1 3643257 3644042 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 3643257..3644042 Burkholderia pseudomallei K96243 3092690 YP_109649.1 CDS BPSL3054 NC_006350.1 3644053 3644694 D Similar to Ralstonia solanacearum hypothetical protein Rsc2886 or Rs00215 SWALL:Q8XVE5 (EMBL:AL646072) (223 aa) fasta scores: E(): 2.3e-23, 46.33% id in 218 aa; hypothetical protein 3644053..3644694 Burkholderia pseudomallei K96243 3092939 YP_109650.1 CDS ung NC_006350.1 3644787 3645524 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3644787..3645524 Burkholderia pseudomallei K96243 3091556 YP_109651.1 CDS acpD NC_006350.1 3645743 3646339 R Similar to Escherichia coli acyl carrier protein phosphodiesterase AcpD or b1412 SWALL:ACPD_ECOLI (SWALL:P41407) (200 aa) fasta scores: E(): 1.4e-31, 48.48% id in 198 aa; ACP phosphodieterase complement(3645743..3646339) Burkholderia pseudomallei K96243 3094516 YP_109652.1 CDS BPSL3057 NC_006350.1 3646478 3648316 R Similar to Ralstonia solanacearum hypothetical protein Rsc2890 or Rs00209 SWALL:Q8XVE1 (EMBL:AL646072) (621 aa) fasta scores: E(): 9.6e-90, 60.69% id in 631 aa, and to Neisseria meningitidis hypothetical protein Nmb1726 SWALL:Q9JY58 (EMBL:AE002523) (582 aa) fasta scores: E(): 4e-59, 42.93% id in 587 aa; peptidase complement(3646478..3648316) Burkholderia pseudomallei K96243 3094618 YP_109653.1 CDS dsbC NC_006350.1 3648416 3649153 R Similar to Escherichia coli thiol:disulfide interchange protein DsbC or XprA or b2893 or z4231 or ecs3765 SWALL:DSBC_ECOLI (SWALL:P21892) (236 aa) fasta scores: E(): 8.4e-11, 30.3% id in 231 aa, and to Ralstonia solanacearum probable thiol:disulfide interchange protein DsbC or Rsc2892 or Rs00206 SWALL:Q8XVD9 (EMBL:AL646072) (248 aa) fasta scores: E(): 5.7e-51, 55.06% id in 247 aa; thiol:disulfide interchange protein DsbC complement(3648416..3649153) Burkholderia pseudomallei K96243 3094725 YP_109654.1 CDS BPSL3059 NC_006350.1 3649246 3650427 R Similar to Escherichia coli protein VisC or b2906 SWALL:VISC_ECOLI (SWALL:P25535) (400 aa) fasta scores: E(): 2.6e-33, 34.01% id in 391 aa, and to Escherichia coli 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase UbiF or b0662 SWALL:UBIF_ECOLI (SWALL:P75728) (391 aa) fasta scores: E(): 1.2e-30, 35.78% id in 394 aa; ubiquinone biosynthesis hydroxylase complement(3649246..3650427) Burkholderia pseudomallei K96243 3094619 YP_109655.1 CDS BPSL3060 NC_006350.1 3650742 3650870 D Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsp1260 or rs05305 SWALL:Q8XQG7 (EMBL:AL646083) (42 aa) fasta scores: E(): 0.026, 48.71% id in 39 aa; lipoprotein 3650742..3650870 Burkholderia pseudomallei K96243 3094267 YP_109656.1 CDS BPSL3061 NC_006350.1 3651327 3651692 D hypothetical protein 3651327..3651692 Burkholderia pseudomallei K96243 3094268 YP_109657.1 CDS BPSL3062 NC_006350.1 3652194 3653288 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3652194..3653288 Burkholderia pseudomallei K96243 3094493 YP_109658.1 CDS BPSL3063 NC_006350.1 3653900 3654403 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3653900..3654403 Burkholderia pseudomallei K96243 3094494 YP_109659.1 CDS BPSL3064 NC_006350.1 3654507 3655250 D Weakly similar to Xanthomonas campestris transcriptional regulator AraC family xcc0235 SWALL:AAM39554 (EMBL:AE012119) (245 aa) fasta scores: E(): 0.013, 26.19% id in 252 aa. Similar to the C-terminal region of Caulobacter crescentus transcriptional regulator, arac family cc3506 SWALL:Q9A2Q0 (EMBL:AE006009) (321 aa) fasta scores: E(): 3.4e-07, 30.26% id in 228 aa; hypothetical protein 3654507..3655250 Burkholderia pseudomallei K96243 3091973 YP_109660.1 CDS BPSL3065 NC_006350.1 3655322 3656725 R Similar to Escherichia coli GabA permease GabP or b2663 SWALL:GABP_ECOLI (SWALL:P25527) (466 aa) fasta scores: E(): 6e-107, 66.51% id in 433 aa, and to Pseudomonas aeruginosa gamma-aminobutyrate permease GabP or Pa0129 SWALL:Q9I703 (EMBL:AE004450) (475 aa) fasta scores: E(): 3.4e-117, 68.77% id in 458 aa; amino acid permease complement(3655322..3656725) Burkholderia pseudomallei K96243 3091974 YP_109661.1 CDS BPSL3066 NC_006350.1 3657986 3658966 R Similar to Pseudomonas aeruginosa hypothetical protein Pa4792 SWALL:Q9HV16 (EMBL:AE004892) (311 aa) fasta scores: E(): 2.8e-46, 49.02% id in 308 aa, and to Bacillus subtilis glycerophosphoryl diester phosphodiesterase GlpQ SWALL:GLPQ_BACSU (SWALL:P37965) (293 aa) fasta scores: E(): 0.00032, 30.82% id in 133 aa; hydrolase complement(3657986..3658966) Burkholderia pseudomallei K96243 3091837 YP_109662.1 CDS BPSL3067 NC_006350.1 3659704 3661371 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 3659704..3661371 Burkholderia pseudomallei K96243 3091838 YP_109663.1 CDS BPSL3068 NC_006350.1 3661707 3662330 R Similar to many including predicted hydrolases eg. Agrobacterium tumefaciens hydrolase Atu0797 or agr_c_1458 SWALL:Q8UH86 (EMBL:AE009046) (203 aa) fasta scores: E(): 1.2e-25, 41.58% id in 202 aa; hydrolase complement(3661707..3662330) Burkholderia pseudomallei K96243 3094707 YP_109664.1 CDS BPSL3069 NC_006350.1 3662327 3662854 R Similar to many predicted hydrolases and hypotheticals eg. Clostridium acetobutylicum amidase from nicotinamidase Cac3465 SWALL:Q97DL0 (EMBL:AE007844) (178 aa) fasta scores: E(): 4.6e-13, 30.06% id in 153 aa; hydrolase complement(3662327..3662854) Burkholderia pseudomallei K96243 3094708 YP_109665.1 CDS BPSL3070 NC_006350.1 3663033 3664847 R Similar to Neisseria meningitidis aminopeptidase NMA1640 SWALL:Q9JTT6 (EMBL:AL162756) (659 aa) fasta scores: E(): 3.7e-119, 54.51% id in 598 aa, and to Sus scrofa Xaa-Pro aminopeptidase 2 precursor XpnPep2 SWALL:Q95333 (EMBL:U55039) (673 aa) fasta scores: E(): 1.5e-54, 34.59% id in 607 aa; aminopeptidase complement(3663033..3664847) Burkholderia pseudomallei K96243 3091683 YP_109666.1 CDS BPSL3071 NC_006350.1 3664866 3665120 R Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc2899 or Rs00198 SWALL:Q8XVD2 (EMBL:AL646072) (80 aa) fasta scores: E(): 0.0045, 37.5% id in 80 aa, and to Streptomyces coelicolor integral membrane protein SCO1819 or SCI8.04c SWALL:Q9RJ49 (EMBL:AL132644) (93 aa) fasta scores: E(): 0.43, 27.5% id in 80 aa; hypothetical protein complement(3664866..3665120) Burkholderia pseudomallei K96243 3091684 YP_109667.2 CDS hemA NC_006350.1 3665716 3667014 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3665716..3667014 Burkholderia pseudomallei K96243 3094369 YP_109668.1 CDS prfA NC_006350.1 3667081 3668163 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3667081..3668163 Burkholderia pseudomallei K96243 3092221 YP_109669.1 CDS hemK NC_006350.1 3668207 3669064 D Similar to Escherichia coli protein methyltransferase HemK or b1212 SWALL:HEMK_ECOLI (SWALL:P37186) (277 aa) fasta scores: E(): 1.2e-35, 44.68% id in 273 aa, and to Xylella fastidiosa hemk protein homolog HemK or Xf1512 SWALL:HEMK_XYLFA (SWALL:Q9PD67) (275 aa) fasta scores: E(): 1.2e-41, 50.17% id in 281 aa; protein methyltransferase HemK 3668207..3669064 Burkholderia pseudomallei K96243 3092622 YP_109670.1 CDS BPSL3075 NC_006350.1 3669144 3669452 D Similar to Ralstonia solanacearum hypothetical protein Rsc2904 or Rs00191 SWALL:Q8XVC7 (EMBL:AL646072) (103 aa) fasta scores: E(): 8.6e-32, 83% id in 100 aa, and to Neisseria meningitidis hypothetical protein Nma0984 or Nmb0773 SWALL:Q9JR73 (EMBL:AL162754) (103 aa) fasta scores: E(): 8.2e-25, 67.67% id in 99 aa; hypothetical protein 3669144..3669452 Burkholderia pseudomallei K96243 3093730 YP_109671.1 CDS BPSL3076 NC_006350.1 3669467 3670063 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3669467..3670063 Burkholderia pseudomallei K96243 3093731 YP_109672.1 CDS BPSL3077 NC_006350.1 3670347 3671135 D Similar to Xanthomonas campestris hypothetical protein Xcc3666 SWALL:AAM42936 (EMBL:AE012487) (272 aa) fasta scores: E(): 1.9e-47, 52.27% id in 264 aa, and to Streptomyces coelicolor hypothetical protein SCO3204 or SCE22.21c SWALL:Q9KYU2 (EMBL:AL355832) (253 aa) fasta scores: E(): 8.9e-36, 46.35% id in 233 aa; hypothetical protein 3670347..3671135 Burkholderia pseudomallei K96243 3091696 YP_109673.1 CDS BPSL3078 NC_006350.1 3671584 3673185 R Similar to Ralstonia solanacearum probable amino-acid permease transmembrane protein Rsp0282 or Rs03682 SWALL:Q8XT33 (EMBL:AL646077) (543 aa) fasta scores: E(): 1.8e-156, 73.37% id in 522 aa; amino-acid permease complement(3671584..3673185) Burkholderia pseudomallei K96243 3091697 YP_109674.1 CDS cspD NC_006350.1 3673619 3673822 D May play a regulatory role in chromosomal replication in nutrient-depleted cells. Similar to Escherichia coli cold shock-like protein CspD or CspH or b0880 or z1117 or ecs0966 SWALL:CSPD_ECOLI (SWALL:P24245) (74 aa) fasta scores: E(): 4.2e-16, 62.68% id in 67 aa; cold shock-like protein CspD 3673619..3673822 Burkholderia pseudomallei K96243 3094215 YP_109675.1 CDS BPSL3080 NC_006350.1 3674009 3675271 R Similar to Rhizobium loti DnaK-type molecular chaperone, DnaK Mll5617 SWALL:Q98BE0 (EMBL:AP003007) (418 aa) fasta scores: E(): 1e-61, 44.89% id in 421 aa, and to Chlamydia muridarum chaperone protein DnaK or Tc0675 SWALL:DNAK_CHLMU (SWALL:P56836) (654 aa) fasta scores: E(): 1.7e-05, 26.8% id in 250 aa, and to Vibrio cholerae chaperone protein DnaK or Vc0855 SWALL:DNAK_VIBCH (SWALL:O34241) (635 aa) fasta scores: E(): 2e-05, 26.12% id in 421 aa; chaperone protein complement(3674009..3675271) Burkholderia pseudomallei K96243 3094252 YP_109676.1 CDS BPSL3081 NC_006350.1 3675933 3676550 R Similar to Paenibacillus sp. A11-2 thermophilic NAD(P)H-flavin oxidoreductase TdsD SWALL:Q9FAE6 (EMBL:AB040150) (200 aa) fasta scores: E(): 1.4e-22, 39.22% id in 181 aa; oxidoreductase complement(3675933..3676550) Burkholderia pseudomallei K96243 3094253 YP_109677.1 CDS BPSL3082 NC_006350.1 3677024 3678307 R Similar to Ralstonia solanacearum transport transmembrane protein Rsp0107 or Rs03015 SWALL:Q8XTK1 (EMBL:AL646076) (432 aa) fasta scores: E(): 3.8e-121, 75.06% id in 417 aa; hypothetical protein complement(3677024..3678307) Burkholderia pseudomallei K96243 3092025 YP_109678.1 CDS BPSL3083 NC_006350.1 3678466 3679110 D Similar to Ralstonia solanacearum transcription regulator protein Rsp0108 or Rs03014 SWALL:Q8XTK0 (EMBL:AL646076) (216 aa) fasta scores: E(): 1e-35, 56.45% id in 209 aa, and to Streptomyces coelicolor TetR-family transcriptional regulator SCO7602 or SC7H9.14 SWALL:Q9EWI2 (EMBL:AL450223) (195 aa) fasta scores: E(): 1.4e-19, 40.23% id in 169 aa; TetR family transcriptional regulator 3678466..3679110 Burkholderia pseudomallei K96243 3092026 YP_109679.1 CDS BPSL3084 NC_006350.1 3679455 3680078 D Similar to Xylella fastidiosa hypothetical protein Xf1204 SWALL:Q9PE24 (EMBL:AE003954) (185 aa) fasta scores: E(): 7.3e-34, 52.57% id in 175 aa; hypothetical protein 3679455..3680078 Burkholderia pseudomallei K96243 3092839 YP_109680.1 CDS BPSL3085 NC_006350.1 3680163 3681059 R Similar to Ralstonia solanacearum hypothetical protein Rsc3157 or Rs00441 SWALL:Q8XUN0 (EMBL:AL646074) (278 aa) fasta scores: E(): 5e-95, 83.75% id in 277 aa; hypothetical protein complement(3680163..3681059) Burkholderia pseudomallei K96243 3092840 YP_109681.1 CDS BPSL3086 NC_006350.1 3681187 3682377 R Similar to Ralstonia solanacearum hypothetical protein Rsc3159 or Rs00439 SWALL:Q8XUM8 (EMBL:AL646074) (376 aa) fasta scores: E(): 3.1e-114, 75.92% id in 378 aa, and to Neisseria meningitidis hypothetical protein Nma1400 SWALL:Q9JUB9 (EMBL:AL162755) (331 aa) fasta scores: E(): 5.3e-57, 49.54% id in 329 aa; hypothetical protein complement(3681187..3682377) Burkholderia pseudomallei K96243 3094309 YP_109682.1 CDS BPSL3087 NC_006350.1 3682680 3683882 R Similar to Micromonospora megalomicea subsp. nigra mycarose O-acyltransferase MegY SWALL:Q9F838 (EMBL:AF263245) (390 aa) fasta scores: E(): 5.7e-12, 25.38% id in 394 aa, and to Streptomyces mycarofaciens acyltransferase MdmB SWALL:MDMB_STRMY (SWALL:Q00718) (387 aa) fasta scores: E(): 0.00011, 25.93% id in 401 aa; acyltransferase complement(3682680..3683882) Burkholderia pseudomallei K96243 3094310 YP_109683.1 CDS BPSL3088 NC_006350.1 3684236 3684682 R Similar to Pseudomonas aeruginosa hypothetical protein Pa0127 SWALL:Q9I705 (EMBL:AE004450) (166 aa) fasta scores: E(): 6.1e-31, 62.14% id in 140 aa; hypothetical protein complement(3684236..3684682) Burkholderia pseudomallei K96243 3094612 YP_109684.1 CDS BPSL3089 NC_006350.1 3685343 3687508 D Similar to Ralstonia solanacearum aminopeptidase transmembrane protein Rsp0532 or Rs00411 SWALL:Q8XSE4 (EMBL:AL646079) (748 aa) fasta scores: E(): 2.4e-99, 46.99% id in 749 aa, and to Mus musculus puromycin-sensitive aminopeptidase Psa SWALL:PSA_MOUSE (SWALL:Q11011) (920 aa) fasta scores: E(): 8e-34, 27.5% id in 629 aa, and to Lactobacillus helveticus aminopeptidase N PepN SWALL:AMPN_LACHE (SWALL:Q10730) (844 aa) fasta scores: E(): 1.1e-25, 30.13% id in 511 aa; peptidase 3685343..3687508 Burkholderia pseudomallei K96243 3094613 YP_109685.1 CDS BPSL3090 NC_006350.1 3688531 3688800 D hypothetical protein 3688531..3688800 Burkholderia pseudomallei K96243 3094158 YP_109686.1 CDS BPSL3091 NC_006350.1 3688903 3689133 D hypothetical protein 3688903..3689133 Burkholderia pseudomallei K96243 3094159 YP_109687.1 CDS BPSL3092 NC_006350.1 3689749 3691017 D Similar to Pseudomonas aeruginosa probable secretion protein Pa4142 SWALL:Q9HWN9 (EMBL:AE004831) (418 aa) fasta scores: E(): 2.3e-68, 53.82% id in 418 aa, and to Escherichia coli microcin H47 secretion protein MchE SWALL:MCHE_ECOLI (SWALL:Q9EXN6) (424 aa) fasta scores: E(): 7.3e-22, 25% id in 420 aa, and to Escherichia coli colicin V secretion protein CvaA SWALL:CVAA_ECOLI (SWALL:P22519) (413 aa) fasta scores: E(): 5.7e-20, 24.44% id in 405 aa; bacteriocin secretion protein 3689749..3691017 Burkholderia pseudomallei K96243 3094505 YP_109688.1 CDS BPSL3093 NC_006350.1 3691032 3693293 D Similar to Pseudomonas aeruginosa probable toxin transporter Pa4143 SWALL:Q9HWN8 (EMBL:AE004831) (719 aa) fasta scores: E(): 1e-153, 67.77% id in 720 aa, and to Escherichia coli probable microcin H47 secretion ATP-binding protein MchF SWALL:MCHF_ECOLI (SWALL:Q9EXN5) (698 aa) fasta scores: E(): 2.1e-90, 41.15% id in 690 aa, and to Escherichia coli colicin V secretion ATP-binding protein CvaB SWALL:CVAB_ECOLI (SWALL:P22520) (698 aa) fasta scores: E(): 1.5e-87, 40.79% id in 679 aa; colicin V-processing peptidase 3691032..3693293 Burkholderia pseudomallei K96243 3094506 YP_109689.1 CDS BPSL3094 NC_006350.1 3693290 3694738 D Similar to Pseudomonas aeruginosa probable secretion protein Pa4144 SWALL:Q9HWN7 (EMBL:AE004831) (471 aa) fasta scores: E(): 8.1e-62, 43.81% id in 477 aa, and to Bordetella pertussis protein CyaE SWALL:CYAE_BORPE (SWALL:P11092) (474 aa) fasta scores: E(): 1.1e-23, 31.89% id in 486 aa; outer membrane bacteriocin efflux protein 3693290..3694738 Burkholderia pseudomallei K96243 3092470 YP_109690.1 CDS BPSL3095 NC_006350.1 3694948 3695934 R Alanine-rich, low complexity protein. No significant database matches; hypothetical protein complement(3694948..3695934) Burkholderia pseudomallei K96243 3092471 YP_109691.1 CDS BPSL3096 NC_006350.1 3696333 3696911 D Similar to Bacteriophage A500 L-alanyl-D-glutamate peptidase Ply or Ply500 SWALL:AEPE_BPA50 (SWALL:Q37979) (289 aa) fasta scores: E(): 0.001, 35.78% id in 109 aa, and to Listeria innocua phagelysin Cply2438 SWALL:Q48583 (EMBL:X89234) (287 aa) fasta scores: E(): 0.0019, 34.86% id in 109 aa; bacteriophage-related peptidase 3696333..3696911 Burkholderia pseudomallei K96243 3092435 YP_109692.1 CDS BPSL3097 NC_006350.1 3697190 3701083 D Similar to Ralstonia solanacearum probable transmembrane protein Rsp0763 or Rs01945 SWALL:Q8XRR8 (EMBL:AL646080) (1313 aa) fasta scores: E(): 2.1e-151, 70.59% id in 1306 aa, and to Rhizobium leguminosarum ImpL SWALL:Q93EC2 (EMBL:AF361470) (1158 aa) fasta scores: E(): 2.6e-34, 25.43% id in 1270 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciS protein SWALL:Q93IR7 (EMBL:AJ320483) (1289 aa) fasta scores: E(): 4.5e-13, 25.89% id in 1259 aa; hypothetical protein 3697190..3701083 Burkholderia pseudomallei K96243 3092436 YP_109693.1 CDS BPSL3098 NC_006350.1 3701080 3702069 D Similar to Ralstonia solanacearum hypothetical protein Rsp0762 or Rs01946 SWALL:Q8XRR9 (EMBL:AL646080) (328 aa) fasta scores: E(): 3.3e-81, 61.28% id in 328 aa; hypothetical protein 3701080..3702069 Burkholderia pseudomallei K96243 3093089 YP_109694.1 CDS BPSL3099 NC_006350.1 3702074 3703006 D Similar to Ralstonia solanacearum probable lipoprotein Rsp0761 or Rs01947 SWALL:Q8XRS0 (EMBL:AL646080) (277 aa) fasta scores: E(): 9.8e-51, 62.9% id in 275 aa, and to Bordetella avium outer membrane protein A precursor OmpA SWALL:OMPA_BORAV (SWALL:Q05146) (194 aa) fasta scores: E(): 1.8e-07, 44.89% id in 98 aa; outer membrane protein 3702074..3703006 Burkholderia pseudomallei K96243 3093090 YP_109695.1 CDS BPSL3100 NC_006350.1 3703205 3704326 R Similar to Ralstonia solanacearum hypothetical protein Rsp0759 or Rs01949 SWALL:Q8XRS2 (EMBL:AL646080) (337 aa) fasta scores: E(): 1.5e-44, 52.82% id in 354 aa, and to Rhizobium leguminosarum ImpA SWALL:Q93ED3 (EMBL:AF361470) (358 aa) fasta scores: E(): 7.1e-06, 27.1% id in 380 aa; hypothetical protein complement(3703205..3704326) Burkholderia pseudomallei K96243 3093360 YP_109696.1 CDS clpB NC_006350.1 3704416 3707085 R Similar to Escherichia coli ClpB protein or HtpM or b2592 or z3886 or ecs3455 SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 2.5e-88, 38.75% id in 867 aa, and to Yersinia enterocolitica Clp protease-associated protein ClpB SWALL:Q9F746 (EMBL:AF285784) (890 aa) fasta scores: E(): 5.8e-134, 49.31% id in 876 aa; protease associated ATPase ClpB complement(3704416..3707085) Burkholderia pseudomallei K96243 3094210 YP_109697.1 CDS BPSL3102 NC_006350.1 3707119 3708219 R Similar to Ralstonia solanacearum hypothetical protein Rsp0748 or Rs01960 SWALL:Q8XRT3 (EMBL:AL646080) (363 aa) fasta scores: E(): 4.5e-83, 57.33% id in 368 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 1.6e-17, 30.07% id in 256 aa; hypothetical protein complement(3707119..3708219) Burkholderia pseudomallei K96243 3093361 YP_109698.1 CDS BPSL3103 NC_006350.1 3708183 3710009 R Similar to Ralstonia solanacearum hypothetical protein Rsp0747 or Rs01961 SWALL:Q8XRT4 (EMBL:AL646080) (616 aa) fasta scores: E(): 1.2e-156, 60.72% id in 611 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 6e-31, 30.15% id in 630 aa; hypothetical protein complement(3708183..3710009) Burkholderia pseudomallei K96243 3092705 YP_109699.1 CDS BPSL3104 NC_006350.1 3710101 3710613 R Similar to Ralstonia solanacearum hypothetical protein Rsp0746 or Rs01962 SWALL:Q8XRT5 (EMBL:AL646080) (157 aa) fasta scores: E(): 1.4e-42, 71.79% id in 156 aa; hypothetical protein complement(3710101..3710613) Burkholderia pseudomallei K96243 3092706 YP_109700.1 CDS BPSL3105 NC_006350.1 3710641 3711144 R Similar to Ralstonia solanacearum hypothetical protein Rsp0745 or Rs01963 SWALL:Q8XRT6 (EMBL:AL646080) (167 aa) fasta scores: E(): 3.7e-49, 72.45% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2367 SWALL:Q9I1B2 (EMBL:AE004663) (165 aa) fasta scores: E(): 1.1e-11, 32.91% id in 158 aa; hypothetical protein complement(3710641..3711144) Burkholderia pseudomallei K96243 3093075 YP_109701.1 CDS BPSL3106 NC_006350.1 3711217 3712707 R Similar to Ralstonia solanacearum hypothetical protein Rsp0744 or Rs01964 SWALL:Q8XRT7 (EMBL:AL646080) (496 aa) fasta scores: E(): 9.4e-175, 86.26% id in 495 aa, and to Rhizobium leguminosarum ImpC SWALL:Q93ED1 (EMBL:AF361470) (493 aa) fasta scores: E(): 3.2e-102, 51.41% id in 496 aa; hypothetical protein complement(3711217..3712707) Burkholderia pseudomallei K96243 3093076 YP_109702.1 CDS BPSL3107 NC_006350.1 3712724 3713242 R Similar to Ralstonia solanacearum hypothetical protein Rsp0743 or Rs01965 SWALL:Q8XRT8 (EMBL:AL646080) (170 aa) fasta scores: E(): 4.6e-47, 79.16% id in 168 aa; hypothetical protein complement(3712724..3713242) Burkholderia pseudomallei K96243 3093725 YP_109703.1 CDS BPSL3108 NC_006350.1 3713279 3713950 R Similar to Ralstonia solanacearum lipoprotein Rsp0742 or Rs01966 SWALL:Q8XRT9 (EMBL:AL646080) (215 aa) fasta scores: E(): 4.6e-27, 53.36% id in 223 aa; lipoprotein complement(3713279..3713950) Burkholderia pseudomallei K96243 3093726 YP_109704.1 CDS BPSL3109 NC_006350.1 3714325 3714939 D Similar to Ralstonia solanacearum transmembrane protein Rsp0741 or Rs01967 SWALL:Q8XRU0 (EMBL:AL646080) (193 aa) fasta scores: E(): 3.9e-40, 59.16% id in 191 aa; lipoprotein 3714325..3714939 Burkholderia pseudomallei K96243 3094305 YP_109705.1 CDS BPSL3110 NC_006350.1 3715048 3716394 D Similar to Ralstonia solanacearum hypothetical protein Rsp0740 or Rs01968 SWALL:Q8XRU1 (EMBL:AL646080) (448 aa) fasta scores: E(): 3.8e-135, 73.66% id in 448 aa, and to Rhizobium leguminosarum ImpJ SWALL:Q93EC4 (EMBL:AF361470) (446 aa) fasta scores: E(): 8.8e-32, 29.13% id in 460 aa; hypothetical protein 3715048..3716394 Burkholderia pseudomallei K96243 3094306 YP_109706.1 CDS BPSL3111 NC_006350.1 3716391 3717176 D Similar to Ralstonia solanacearum probable transmembrane protein Rsp0739 or Rs01969 SWALL:Q8XRU2 (EMBL:AL646080) (263 aa) fasta scores: E(): 2.7e-70, 64.98% id in 257 aa; hypothetical protein 3716391..3717176 Burkholderia pseudomallei K96243 3094093 YP_109707.1 CDS BPSL3114 NC_006350.1 3718434 3719234 D hypothetical protein 3718434..3719234 Burkholderia pseudomallei K96243 3093388 YP_109708.1 CDS BPSL3115 NC_006350.1 3719241 3720311 D Similar to Neisseria meningitidis transcriptional regulator, HTH_3 family NMB2012 SWALL:Q9JXJ6 (EMBL:AE002551) (363 aa) fasta scores: E(): 8.6e-26, 38.1% id in 370 aa, and to Comamonas testosteroni regulation of transfer protein TrbA SWALL:Q9AHH8 (EMBL:AF311437) (102 aa) fasta scores: E(): 0.068, 31.52% id in 92 aa; transcriptional regulator 3719241..3720311 Burkholderia pseudomallei K96243 3093389 YP_109709.1 CDS BPSL3116 NC_006350.1 3720594 3720857 D Identical to Burkholderia cepacia insertion element IS407 hypothetical protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa. Similar to Ralstonia solanacearum ISRso14-transposase orfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa; transposase 3720594..3720857 Burkholderia pseudomallei K96243 3094429 YP_109710.1 CDS BPSL3117 NC_006350.1 3720854 3721714 D Similar to Ralstonia solanacearum ISRso14-transposase orfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 1.2e-97, 86.86% id in 274 aa. C-terminus is identical to Burkholderia cepacia insertion element IS407 hypothetical protein SWALL:YI71_BURCE (SWALL:P24577) (183 aa) fasta scores: E(): 8.9e-73, 100% id in 183 aa; hypothetical protein 3720854..3721714 Burkholderia pseudomallei K96243 3094430 YP_109711.1 CDS BPSL3118 NC_006350.1 3722117 3724717 R Contains a region with similarity to type I restriction modification system methylases eg. Xanthomonas campestris XmnI methyltransferase Xcc4142 SWALL:AAM43363 (EMBL:AE012539) (487 aa) fasta scores: E(): 5.6e-08, 27.5% id in 440 aa, and Campylobacter jejuni restriction and modification enzyme CjeI SWALL:Q9JN06 (EMBL:AF264911) (1250 aa) fasta scores: E(): 0.00027, 20.59% id in 369 aa. CDS contain C-terminal imperfect repeat region with similarity to intergenic region between BSPL3111 and BPSL3113; restriction modification system methylase complement(3722117..3724717) Burkholderia pseudomallei K96243 3094427 YP_109712.1 CDS BPSL3119 NC_006350.1 3724956 3725513 R Similar to Ralstonia solanacearum stringent starvation protein B SspB or Rsc2925 or Rs00327 SWALL:Q8XVA6 (EMBL:AL646072) (165 aa) fasta scores: E(): 2.2e-26, 55.42% id in 175 aa, and to Escherichia coli stringent starvation protein B SspB or b3228 or z4586 or ecs4101 SWALL:SSPB_ECOLI (SWALL:P25663) (165 aa) fasta scores: E(): 1.9e-13, 38.5% id in 174 aa; ClpXP protease specificity-enhancing factor complement(3724956..3725513) Burkholderia pseudomallei K96243 3094428 YP_109713.1 CDS BPSL3120 NC_006350.1 3725547 3726158 R Similar to Ralstonia solanacearum transcription modulator protein SspA or Rsc2926 or Rs00165 SWALL:Q8XVA5 (EMBL:AL646072) (203 aa) fasta scores: E(): 6.1e-79, 98.03% id in 203 aa, and to Escherichia coli stringent starvation protein A SspA or Ssp or Pog or b3229 or z4587 or ecs4102 SWALL:SSPA_ECOLI (SWALL:P05838) (211 aa) fasta scores: E(): 3.3e-30, 44.82% id in 203 aa; stringent starvation protein A complement(3725547..3726158) Burkholderia pseudomallei K96243 3092038 YP_109714.1 CDS petC NC_006350.1 3726251 3727009 R Similar to Rhodospirillum rubrum cytochrome c1 precursor PetC SWALL:CY1_RHORU (SWALL:P23135) (272 aa) fasta scores: E(): 2.5e-07, 32.45% id in 228 aa, and to Ralstonia solanacearum cytochrome c1 precursor transmembrane protein PetC or Rsc2927 or Rs00164 SWALL:Q8XVA4 (EMBL:AL646072) (248 aa) fasta scores: E(): 4.8e-67, 65.07% id in 252 aa; cytochrome c1 complement(3726251..3727009) Burkholderia pseudomallei K96243 3093520 YP_109715.1 CDS petB NC_006350.1 3727032 3728414 R Similar to Rhodobacter capsulatus cytochrome b PetB or CytB SWALL:CYB_RHOCA (SWALL:P08502) (436 aa) fasta scores: E(): 4.6e-57, 39.69% id in 456 aa, and to Rhodocyclus gelatinosus cytochrome b CytB or PetB SWALL:Q93SY6 (EMBL:AF380164) (423 aa) fasta scores: E(): 7.1e-102, 66.96% id in 448 aa; cytochrome b complement(3727032..3728414) Burkholderia pseudomallei K96243 3094364 YP_109716.1 CDS petA NC_006350.1 3728415 3729038 R Similar to Rhodobacter capsulatus ubiquinol-cytochrome C reductase iron-sulfur subunit PetA or FbcF SWALL:UCRI_RHOCA (SWALL:P08500) (191 aa) fasta scores: E(): 1.3e-14, 37.5% id in 192 aa, and to Rhodocyclus gelatinosus rieske protein PetA SWALL:Q93SY7 (EMBL:AF380164) (198 aa) fasta scores: E(): 6.7e-41, 54.87% id in 195 aa; ubiquinol-cytochrome c reductase iron-sulfur subunit complement(3728415..3729038) Burkholderia pseudomallei K96243 3094363 YP_109717.1 CDS BPSL3124 NC_006350.1 3729256 3730002 R Similar to Ralstonia solanacearum hypothetical protein Rsc2931 or Rs00159 SWALL:YT31_RALSO (SWALL:Q8XVA0) (248 aa) fasta scores: E(): 2.7e-60, 59.67% id in 248 aa; hypothetical protein complement(3729256..3730002) Burkholderia pseudomallei K96243 3092039 YP_109718.1 CDS BPSL3125 NC_006350.1 3730024 3731232 D Similar to Pseudomonas aeruginosa AlgW SWALL:Q51374 (EMBL:U29172) (389 aa) fasta scores: E(): 2e-57, 49.09% id in 385 aa, and to Brucella melitensis protease DO Bmei0783 SWALL:Q8YHL4 (EMBL:AE009519) (474 aa) fasta scores: E(): 3.3e-48, 45.78% id in 356 aa, and to Escherichia coli protease DegQ or HhoA or b3234 SWALL:DEGQ_ECOLI (SWALL:P39099) (455 aa) fasta scores: E(): 2.3e-46, 43.37% id in 362 aa; DegQ protease 3730024..3731232 Burkholderia pseudomallei K96243 3092821 YP_109719.1 CDS tatC NC_006350.1 3731572 3732354 R Similar to Escherichia coli Sec-independent protein translocase TatC or MttB or b3839 or z5360 or ecs4768 SWALL:TATC_ECOLI (SWALL:P27857) (258 aa) fasta scores: E(): 1.8e-48, 52.03% id in 246 aa, and to Alcaligenes eutrophus TatC SWALL:Q8VQ52 (EMBL:AF461118) (265 aa) fasta scores: E(): 5.3e-69, 71.14% id in 253 aa; Sec-independent protein translocase TatC complement(3731572..3732354) Burkholderia pseudomallei K96243 3091540 YP_109720.1 CDS tatB NC_006350.1 3732393 3732920 R Similar to Escherichia coli Sec-independent protein translocase TatB or MttA2 or b3838 or z5359 or ecs4767 SWALL:TATB_ECOLI (SWALL:O69415) (171 aa) fasta scores: E(): 0.022, 31.46% id in 143 aa, and to Alcaligenes eutrophus TatB SWALL:Q8VQ53 (EMBL:AF461118) (170 aa) fasta scores: E(): 2.4e-30, 57.22% id in 173 aa; sec-independent translocase complement(3732393..3732920) Burkholderia pseudomallei K96243 3092514 YP_109721.1 CDS tatA NC_006350.1 3732947 3733180 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase A complement(3732947..3733180) Burkholderia pseudomallei K96243 3094102 YP_109722.1 CDS BPSL3129 NC_006350.1 3733269 3733634 R Similar to Neisseria meningitidis nucleotide-binding protein NMA0806 SWALL:Q9JVK0 (EMBL:AL162754) (107 aa) fasta scores: E(): 1.7e-19, 51.37% id in 109 aa; hypothetical protein complement(3733269..3733634) Burkholderia pseudomallei K96243 3092822 YP_109723.1 CDS BPSL3130 NC_006350.1 3733663 3734052 R Similar to Ralstonia solanacearum probable transmembrane protein Rsc2943 or Rs00144 SWALL:Q8XV88 (EMBL:AL646072) (124 aa) fasta scores: E(): 4e-22, 54.62% id in 119 aa; hypothetical protein complement(3733663..3734052) Burkholderia pseudomallei K96243 3091601 YP_109724.1 CDS hisE NC_006350.1 3734105 3734473 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(3734105..3734473) Burkholderia pseudomallei K96243 3091926 YP_109725.1 CDS hisI NC_006350.1 3734470 3734886 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(3734470..3734886) Burkholderia pseudomallei K96243 3094021 YP_109726.2 CDS hisF NC_006350.1 3734883 3735656 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3734883..3735656) Burkholderia pseudomallei K96243 3091767 YP_109727.1 CDS hisA NC_006350.1 3735739 3736494 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(3735739..3736494) Burkholderia pseudomallei K96243 3093946 YP_109728.1 CDS hisH NC_006350.1 3736662 3737303 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3736662..3737303) Burkholderia pseudomallei K96243 3092961 YP_109729.1 CDS BPSL3136 NC_006350.1 3737300 3737920 R Similar to Ralstonia solanacearum probable transmembrane protein Rsc2949 or Rs00137 SWALL:Q8XV82 (EMBL:AL646072) (207 aa) fasta scores: E(): 1.6e-51, 67.31% id in 205 aa, and to Shigella flexneri MarC SWALL:AAL06491 (EMBL:AF411963) (221 aa) fasta scores: E(): 6.5e-12, 34.74% id in 213 aa; hypothetical protein complement(3737300..3737920) Burkholderia pseudomallei K96243 3091602 YP_109730.1 CDS hisB NC_006350.1 3737976 3738563 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(3737976..3738563) Burkholderia pseudomallei K96243 3092887 YP_109731.1 CDS hisC NC_006350.1 3738627 3739697 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(3738627..3739697) Burkholderia pseudomallei K96243 3092888 YP_109732.1 CDS hisD NC_006350.1 3739853 3741190 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(3739853..3741190) Burkholderia pseudomallei K96243 3091925 YP_109733.1 CDS hisG NC_006350.1 3741232 3741888 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase complement(3741232..3741888) Burkholderia pseudomallei K96243 3092960 YP_109734.1 CDS murA NC_006350.1 3741885 3743234 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3741885..3743234) Burkholderia pseudomallei K96243 3091511 YP_109735.1 CDS BPSL3142 NC_006350.1 3743248 3743487 R Similar to Ralstonia solanacearum hypothetical protein Rsc2954 or Rs01346 SWALL:Q8XV77 (EMBL:AL646072) (78 aa) fasta scores: E(): 3.7e-27, 87.01% id in 77 aa, and to Vibrio cholerae BolA protein or Vc2296 SWALL:BOLA_VIBCH (SWALL:Q9KPS0) (106 aa) fasta scores: E(): 1e-06, 41.09% id in 73 aa; BolA-like protein complement(3743248..3743487) Burkholderia pseudomallei K96243 3091486 YP_109736.1 CDS BPSL3143 NC_006350.1 3743573 3744328 R Similar to Caulobacter crescentus ABC-2 type transporter Cc2244 SWALL:Q9A651 (EMBL:AE005895) (273 aa) fasta scores: E(): 3.3e-39, 50.59% id in 253 aa, and to Yersinia pestis ABC transporter integral membrane protein Ypo3405 SWALL:Q8ZBK4 (EMBL:AJ414157) (256 aa) fasta scores: E(): 5.9e-30, 37.5% id in 248 aa; ABC transporter inner membrane subunit complement(3743573..3744328) Burkholderia pseudomallei K96243 3091487 YP_109737.1 CDS BPSL3144 NC_006350.1 3744325 3745266 R Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein Rsc2956 or Rs01344 SWALL:Q8XV75 (EMBL:AL646072) (321 aa) fasta scores: E(): 1.3e-76, 78.85% id in 298 aa, and to Rhizobium loti nodulation ATP-binding protein I NodI or Mlr6164 SWALL:NODI_RHILO (SWALL:P23703) (340 aa) fasta scores: E(): 6e-27, 38.39% id in 323 aa; ABC transporter ATP-binding subunit complement(3744325..3745266) Burkholderia pseudomallei K96243 3091438 YP_109738.1 CDS BPSL3145 NC_006350.1 3745547 3745816 R Similar to Ralstonia solanacearum signal peptide protein Rsc2957 or Rs01343 SWALL:Q8XV74 (EMBL:AL646072) (115 aa) fasta scores: E(): 3.2e-09, 50.6% id in 83 aa, and to Pseudomonas putida toluene tolerance protein Ttg2E SWALL:Q9Z3Z8 (EMBL:AF106002) (100 aa) fasta scores: E(): 0.13, 31.25% id in 80 aa; hypothetical protein complement(3745547..3745816) Burkholderia pseudomallei K96243 3091439 YP_109739.1 CDS BPSL3146 NC_006350.1 3745813 3746445 R Similar to Ralstonia solanacearum probable signal peptide protein Rsc2958 or Rs01342 SWALL:Q8XV73 (EMBL:AL646072) (211 aa) fasta scores: E(): 4.6e-34, 47.84% id in 209 aa, and to Pseudomonas putida toluene tolerance protein Ttg2D SWALL:Q9Z3Z9 (EMBL:AF106002) (215 aa) fasta scores: E(): 1.9e-06, 25% id in 208 aa; hypothetical protein complement(3745813..3746445) Burkholderia pseudomallei K96243 3094199 YP_109740.1 CDS BPSL3147 NC_006350.1 3746560 3747570 R Similar to Ralstonia solanacearum probable lipoprotein precursor VacJ or Rsc2959 or Rs01340 SWALL:Q8XV72 (EMBL:AL646072) (269 aa) fasta scores: E(): 1.5e-30, 52.61% id in 249 aa, and to Shigella flexneri VacJ lipoprotein or Sf2424 SWALL:VACJ_SHIFL (SWALL:P43262) (251 aa) fasta scores: E(): 1.7e-15, 39.16% id in 240 aa; lipoprotein complement(3746560..3747570) Burkholderia pseudomallei K96243 3094200 YP_109741.1 CDS BPSL3148 NC_006350.1 3747567 3748127 R Similar to Ralstonia solanacearum probable signal peptide protein Rsc2960 or Rs01338 SWALL:Q8XV71 (EMBL:AL646072) (173 aa) fasta scores: E(): 3.5e-36, 67.42% id in 175 aa, and to Neisseria meningitidis outer membrane transport protein NMA0487 or NMB1964 SWALL:Q9JR43 (EMBL:AL162753) (164 aa) fasta scores: E(): 3.4e-25, 58.89% id in 163 aa; hypothetical protein complement(3747567..3748127) Burkholderia pseudomallei K96243 3094175 YP_109742.1 CDS BPSL3149 NC_006350.1 3748140 3748907 R Similar to many membrane proteins, e.g. Ralstonia solanacearum probable transmembrane protein Rsc2961 or Rs01337 SWALL:Q8XV70 (EMBL:AL646072) (255 aa) fasta scores: E(): 3.7e-67, 77.64% id in 255 aa; hypothetical protein complement(3748140..3748907) Burkholderia pseudomallei K96243 3094176 YP_109743.1 CDS BPSL3150 NC_006350.1 3748904 3749722 R Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein Rsc2962 or Rs01335 SWALL:Q8XV69 (EMBL:AL646072) (279 aa) fasta scores: E(): 1.3e-66, 72.79% id in 272 aa, and to Pseudomonas putida toluene tolerance protein Ttg2A SWALL:Q9Z402 (EMBL:AF106002) (269 aa) fasta scores: E(): 1.6e-49, 54.85% id in 268 aa; ABC transporter ATP-binding subunit complement(3748904..3749722) Burkholderia pseudomallei K96243 3094146 YP_109744.1 CDS thiE NC_006350.1 3749822 3750916 R Contains extra N-terminal domain not seen in most homologues. C-terminal portion similar to Escherichia coli thiamine-phosphate pyrophosphorylase ThiE or b3993 SWALL:THIE_ECOLI (SWALL:P30137) (211 aa) fasta scores: E(): 2.3e-33, 55.28% id in 208 aa Full length similarity to to Ralstonia solanacearum probable thiamine-phosphate pyrophosphorylase ThiE1 or Rsc0108 or Rs00978 SWALL:Q8Y373 (EMBL:AL646057) (383 aa) fasta scores: E(): 1.3e-33, 46.6% id in 339 aa; thiamine-phosphate pyrophosphorylase complement(3749822..3750916) Burkholderia pseudomallei K96243 3092618 YP_109745.1 CDS thiG NC_006350.1 3750913 3751728 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(3750913..3751728) Burkholderia pseudomallei K96243 3092619 YP_109746.1 CDS thiS NC_006350.1 3751781 3751978 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(3751781..3751978) Burkholderia pseudomallei K96243 3092335 YP_109747.1 CDS thiO NC_006350.1 3752027 3753154 R Similar to Rhizobium etli thiamine biosynthesis oxidoreductase ThiO SWALL:THIO_RHIET (SWALL:O34292) (327 aa) fasta scores: E(): 1.5e-29, 43.9% id in 328 aa; thiamine biosynthesis oxidoreductase ThiO complement(3752027..3753154) Burkholderia pseudomallei K96243 3092334 YP_109748.2 CDS BPSL3155 NC_006350.1 3753763 3755529 D Similar to Ralstonia solanacearum probable ATP-binding transport ABC transporter protein rsc0456 or rs04444 SWALL:Q8Y280 (EMBL:AL646059) (614 aa) fasta scores: E(): 1.9e-86, 49.01% id in 557 aa; ABC transporter 3753763..3755529 Burkholderia pseudomallei K96243 3094147 YP_109749.1 CDS BPSL3156 NC_006350.1 3755758 3756312 R Similar to Ralstonia solanacearum hypothetical protein Rsc2364 or Rs01182 SWALL:Q8XWV6 (EMBL:AL646069) (207 aa) fasta scores: E(): 1.6e-08, 31.74% id in 189 aa, and to Pyrococcus abyssi hypothetical protein Pab0062 SWALL:Q9V2H2 (EMBL:AJ248283) (184 aa) fasta scores: E(): 0.00024, 26.08% id in 184 aa; hypothetical protein complement(3755758..3756312) Burkholderia pseudomallei K96243 3092182 YP_109750.1 CDS BPSL3157 NC_006350.1 3756315 3757826 R Similar to Vibrio cholerae sodium/alanine symporter Vc2356 SWALL:Q9KPL1 (EMBL:AE004306) (476 aa) fasta scores: E(): 4.5e-94, 56.5% id in 469 aa, and to Bacillus subtilis amino acid carrier protein AlsT SWALL:ALST_BACSU (SWALL:Q45068) (465 aa) fasta scores: E(): 3.8e-80, 49.46% id in 463 aa; sodium:amino acid symporter complement(3756315..3757826) Burkholderia pseudomallei K96243 3092183 YP_109751.2 CDS gltD NC_006350.1 3758107 3759573 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(3758107..3759573) Burkholderia pseudomallei K96243 3092901 YP_109752.1 CDS glt1 NC_006350.1 3759667 3764370 R Similar to Synechocystis sp. ferredoxin-dependent glutamate synthase 2 GltS or Sll1499 SWALL:GLTS_SYNY3 (SWALL:P55038) (1556 aa) fasta scores: E(): 0, 43.8% id in 1573 aa, and to Ralstonia solanacearum probable glutamate synthase GltB or Rsc2965 or Rs01332 SWALL:Q8XV66 (EMBL:AL646072) (1582 aa) fasta scores: E(): 0, 83.76% id in 1564 aa; glutamate synthase large subunit complement(3759667..3764370) Burkholderia pseudomallei K96243 3092803 YP_109753.1 CDS BPSL3160 NC_006350.1 3764662 3765375 R Similar to Ralstonia solanacearum hypothetical protein Rsc2966 or rs01331 SWALL:Q8XV65 (EMBL:AL646072) (241 aa) fasta scores: E(): 2.5e-39, 46.66% id in 225 aa; hypothetical protein complement(3764662..3765375) Burkholderia pseudomallei K96243 3093030 YP_109754.1 CDS BPSL3161 NC_006350.1 3765568 3766299 D Similar to Ralstonia solanacearum outer membrane W OmpW or Rsc3350 or Rs02625 SWALL:Q8XU43 (EMBL:AL646074) (241 aa) fasta scores: E(): 2e-43, 51.01% id in 247 aa, and to Vibrio cholerae outer membrane protein W OmpW or Vca0867 SWALL:OMPW_VIBCH (SWALL:P17266) (217 aa) fasta scores: E(): 9.6e-11, 30.16% id in 242 aa; outer membrane protein 3765568..3766299 Burkholderia pseudomallei K96243 3093031 YP_109755.1 CDS ugpQ NC_006350.1 3766445 3767206 R hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; cytoplasmic glycerophosphodiester phosphodiesterase complement(3766445..3767206) Burkholderia pseudomallei K96243 3093003 YP_109756.1 CDS ugpC NC_006350.1 3767251 3768333 R part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit complement(3767251..3768333) Burkholderia pseudomallei K96243 3094792 YP_109757.1 CDS BPSL3164 NC_006350.1 3768359 3769204 R with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein complement(3768359..3769204) Burkholderia pseudomallei K96243 3094793 YP_109758.1 CDS BPSL3165 NC_006350.1 3769201 3770085 R Possibly involved in transport of sn-glycerol-3-phosphate. Similar to many eg. Escherichia coli Sn-glycerol-3-phosphate transport system permease UgpA or b3452 SWALL:UGPA_ECOLI (SWALL:P10905) (295 aa) fasta scores: E(): 4.5e-78, 70.73% id in 287 aa; ABC transporter permease complement(3769201..3770085) Burkholderia pseudomallei K96243 3093368 YP_109759.1 CDS BPSL3166 NC_006350.1 3770216 3771541 R with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein complement(3770216..3771541) Burkholderia pseudomallei K96243 3093369 YP_109760.1 CDS BPSL3167 NC_006350.1 3771626 3772858 R dGTPase type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(3771626..3772858) Burkholderia pseudomallei K96243 3094495 YP_109761.1 CDS aroB NC_006350.1 3772907 3773986 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(3772907..3773986) Burkholderia pseudomallei K96243 3092462 YP_109762.1 CDS aroK NC_006350.1 3773983 3774537 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(3773983..3774537) Burkholderia pseudomallei K96243 3092396 YP_109763.1 CDS BPSL3170 NC_006350.1 3774618 3775946 R Similar to regions from larger proteins eg. Ralstonia solanacearum probable fimbrial type-4 assembly signal peptide protein PilQ or Rsc2971 or Rs01326 SWALL:Q8XV60 (EMBL:AL646073) (714 aa) fasta scores: E(): 5.7e-36, 49.16% id in 421 aa, and to Haemophilus influenzae competence protein E precursor or hi0435 SWALL:COME_HAEIN (SWALL:P31772) (445 aa) fasta scores: E(): 4.7e-31, 31.64% id in 414 aa; secretion system protein complement(3774618..3775946) Burkholderia pseudomallei K96243 3094496 YP_109764.1 CDS BPSL3171 NC_006350.1 3776333 3777292 R hypothetical protein complement(3776333..3777292) Burkholderia pseudomallei K96243 3092446 YP_109765.1 CDS BPSL3172 NC_006350.1 3777289 3777969 R Similar to Ralstonia solanacearum probable fimbrial type-4 assembly membrane transmembrane protein PilN or Rsc2974 or Rs01323 SWALL:Q8XV57 (EMBL:AL646073) (210 aa) fasta scores: E(): 0.0057, 26.69% id in 206 aa; hypothetical protein complement(3777289..3777969) Burkholderia pseudomallei K96243 3092447 YP_109766.1 CDS BPSL3173 NC_006350.1 3777966 3778913 R Similar to Ralstonia solanacearum probable fimbrial type-4 assembly protein PilM or Rsc2975 or Rs01321 SWALL:Q8XV56 (EMBL:AL646073) (356 aa) fasta scores: E(): 0.008, 26.94% id in 193 aa; hypothetical protein complement(3777966..3778913) Burkholderia pseudomallei K96243 3092036 YP_109767.1 CDS mrcA NC_006350.1 3779227 3781548 D Similar to Escherichia coli penicillin-binding protein 1A MrcA or PonA or b3396 SWALL:PBPA_ECOLI (SWALL:P02918) (850 aa) fasta scores: E(): 1.9e-88, 38.63% id in 818 aa; penicillin-binding protein 1A 3779227..3781548 Burkholderia pseudomallei K96243 3091939 YP_109768.1 CDS cyaY NC_006350.1 3781664 3781990 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(3781664..3781990) Burkholderia pseudomallei K96243 3091671 YP_109769.1 CDS BPSL3175A NC_006350.1 3782027 3782311 D lipoprotein 3782027..3782311 Burkholderia pseudomallei K96243 3092037 YP_109770.1 CDS lysA NC_006350.1 3782322 3783593 D Similar to Pseudomonas aeruginosa diaminopimelate decarboxylase LysA or Pa5277 SWALL:DCDA_PSEAE (SWALL:P19572) (415 aa) fasta scores: E(): 1.3e-95, 63.46% id in 416 aa; diaminopimelate decarboxylase 3782322..3783593 Burkholderia pseudomallei K96243 3092477 YP_109771.1 CDS BPSL3177 NC_006350.1 3783852 3784565 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ complement(3783852..3784565) Burkholderia pseudomallei K96243 3094825 YP_109772.1 CDS BPSL3178 NC_006350.1 3784587 3785582 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY complement(3784587..3785582) Burkholderia pseudomallei K96243 3094826 YP_109773.1 CDS BPSL3179 NC_006350.1 3785760 3786950 R Similar to Chlamydomonas reinhardtii cytochrome c biogenesis protein CcsA SWALL:CCSA_CHLRE (SWALL:P48269) (353 aa) fasta scores: E(): 6.1e-29, 38.73% id in 253 aa, and to Ralstonia solanacearum transmembrane cytochrome c-type biogenesis transmembrane protein rsc2985 or rs01238 SWALL:Q8XV46 (EMBL:AL646073) (395 aa) fasta scores: E(): 4.1e-112, 72.2% id in 385 aa; cytochrome C biogenesis protein complement(3785760..3786950) Burkholderia pseudomallei K96243 3091444 YP_109774.1 CDS BPSL3180 NC_006350.1 3786955 3789054 R Similar to Ralstonia solanacearum cytochrome c-type biogenesis transmembrane protein Rsc2986 or Rs01235 SWALL:Q8XV45 (EMBL:AL646073) (700 aa) fasta scores: E(): 2.4e-161, 60.98% id in 692 aa, and to Chlamydomonas reinhardtii Ccs1 SWALL:O50041 (EMBL:U71000) (613 aa) fasta scores: E(): 0.0016, 23.92% id in 418 aa; cytochrome C biogenesis protein complement(3786955..3789054) Burkholderia pseudomallei K96243 3091445 YP_109775.1 CDS BPSL3181 NC_006350.1 3789263 3789910 R Similar to Azotobacter vinelandii cytochrome c4 precursor CycA SWALL:CYC4_AZOVI (SWALL:P43302) (210 aa) fasta scores: E(): 2.4e-25, 45.9% id in 220 aa; cytochrome C complement(3789263..3789910) Burkholderia pseudomallei K96243 3094749 YP_109776.1 CDS engB NC_006350.1 3790127 3790786 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3790127..3790786 Burkholderia pseudomallei K96243 3093266 YP_109777.1 CDS hemB NC_006350.1 3791004 3792068 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3791004..3792068 Burkholderia pseudomallei K96243 3092987 YP_109778.1 CDS dsbD NC_006350.1 3792284 3794167 R Similar to Escherichia coli thiol:disulfide interchange protein DsbD or DipZ or CycZ or CutA2 or b4136 SWALL:DSBD_ECOLI (SWALL:P36655) (565 aa) fasta scores: E(): 2e-23, 33.17% id in 612 aa, and to Ralstonia solanacearum thiol:disulfide interchange protein DsbD or Rsc2990 or Rs01128 SWALL:DSBD_RALSO (SWALL:Q8XV41) (608 aa) fasta scores: E(): 8.3e-68, 51.56% id in 607 aa; thiol:disulfide interchange protein DsbD complement(3792284..3794167) Burkholderia pseudomallei K96243 3094755 YP_109779.1 CDS BPSL3185 NC_006350.1 3794160 3794510 R Similar to Escherichia coli periplasmic divalent cation tolerance protein cuta cuta or cycy or cuta1 or b4137 or z5742 or ecs5118 SWALL:CUTA_ECOLI (SWALL:P36654) (112 aa) fasta scores: E(): 1.4e-09, 35.51% id in 107 aa; periplasmic cytochrome biogenesis protein complement(3794160..3794510) Burkholderia pseudomallei K96243 3094750 YP_109780.1 CDS rplQ NC_006350.1 3794645 3795040 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3794645..3795040) Burkholderia pseudomallei K96243 3092315 YP_109781.1 CDS rpoA NC_006350.1 3795181 3796158 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3795181..3796158) Burkholderia pseudomallei K96243 3094313 YP_109782.1 CDS rpsD NC_006350.1 3796286 3796909 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3796286..3796909) Burkholderia pseudomallei K96243 3091836 YP_109783.1 CDS rpsK NC_006350.1 3797060 3797461 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3797060..3797461) Burkholderia pseudomallei K96243 3091468 YP_109784.1 CDS rpsM NC_006350.1 3797485 3797850 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3797485..3797850) Burkholderia pseudomallei K96243 3093225 YP_109785.1 CDS rpmJ NC_006350.1 3797889 3798005 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3797889..3798005) Burkholderia pseudomallei K96243 3093066 YP_109786.1 CDS infA NC_006350.1 3798026 3798244 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(3798026..3798244) Burkholderia pseudomallei K96243 3093279 YP_109787.2 CDS secY NC_006350.1 3798254 3799600 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3798254..3799600) Burkholderia pseudomallei K96243 3093078 YP_109788.1 CDS rplO NC_006350.1 3799645 3800079 R late assembly protein; 50S ribosomal protein L15 complement(3799645..3800079) Burkholderia pseudomallei K96243 3091743 YP_109789.1 CDS rpmD NC_006350.1 3800108 3800290 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3800108..3800290) Burkholderia pseudomallei K96243 3092456 YP_109790.1 CDS rpsE NC_006350.1 3800306 3800824 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3800306..3800824) Burkholderia pseudomallei K96243 3093329 YP_109791.1 CDS rplR NC_006350.1 3800838 3801203 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3800838..3801203) Burkholderia pseudomallei K96243 3094790 YP_109792.1 CDS rplF NC_006350.1 3801216 3801746 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3801216..3801746) Burkholderia pseudomallei K96243 3094341 YP_109793.1 CDS rpsH NC_006350.1 3801767 3802162 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3801767..3802162) Burkholderia pseudomallei K96243 3092002 YP_109794.1 CDS rpsN NC_006350.1 3802177 3802482 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(3802177..3802482) Burkholderia pseudomallei K96243 3093226 YP_109795.1 CDS rplE NC_006350.1 3802490 3803029 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3802490..3803029) Burkholderia pseudomallei K96243 3094340 YP_109796.1 CDS rplX NC_006350.1 3803047 3803355 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3803047..3803355) Burkholderia pseudomallei K96243 3092826 YP_109797.1 CDS rplN NC_006350.1 3803365 3803733 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3803365..3803733) Burkholderia pseudomallei K96243 3093603 YP_109798.1 CDS rpsQ NC_006350.1 3804043 3804315 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3804043..3804315) Burkholderia pseudomallei K96243 3094358 YP_109799.1 CDS rpmC NC_006350.1 3804312 3804506 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3804312..3804506) Burkholderia pseudomallei K96243 3091809 YP_109800.1 CDS rplP NC_006350.1 3804516 3804932 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3804516..3804932) Burkholderia pseudomallei K96243 3091744 YP_109801.1 CDS rpsC NC_006350.1 3804935 3805735 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3804935..3805735) Burkholderia pseudomallei K96243 3091835 YP_109802.1 CDS rplV NC_006350.1 3805747 3806076 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3805747..3806076) Burkholderia pseudomallei K96243 3091434 YP_109803.1 CDS rpsS NC_006350.1 3806089 3806364 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3806089..3806364) Burkholderia pseudomallei K96243 3091800 YP_109804.1 CDS rplB NC_006350.1 3806375 3807202 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3806375..3807202) Burkholderia pseudomallei K96243 3091929 YP_109805.1 CDS rplW NC_006350.1 3807205 3807519 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3807205..3807519) Burkholderia pseudomallei K96243 3092825 YP_109806.1 CDS rplD NC_006350.1 3807516 3808136 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3807516..3808136) Burkholderia pseudomallei K96243 3092051 YP_109807.1 CDS rplC NC_006350.1 3808136 3808795 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3808136..3808795) Burkholderia pseudomallei K96243 3091930 YP_109808.1 CDS rpsJ NC_006350.1 3808983 3809294 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3808983..3809294) Burkholderia pseudomallei K96243 3092443 YP_109809.1 CDS tuf NC_006350.1 3809447 3810637 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3809447..3810637) Burkholderia pseudomallei K96243 3091614 YP_109810.1 CDS fusA NC_006350.1 3810679 3812781 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3810679..3812781) Burkholderia pseudomallei K96243 3092466 YP_109811.1 CDS rpsG NC_006350.1 3812903 3813373 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3812903..3813373) Burkholderia pseudomallei K96243 3093549 YP_109812.1 CDS rpsL NC_006350.1 3813544 3813924 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3813544..3813924) Burkholderia pseudomallei K96243 3091469 YP_109813.1 CDS recQ NC_006350.1 3814140 3816074 R Similar to Escherichia coli ATP-dependent DNA helicase RecQ or b3822 SWALL:RECQ_ECOLI (SWALL:P15043) (607 aa) fasta scores: E(): 2.8e-77, 44.62% id in 614 aa, and to Ralstonia solanacearum probable ATP-dependent DNA helicase RecQ or Rsc3025 or Rs04732 SWALL:Q8XV07 (EMBL:AL646073) (637 aa) fasta scores: E(): 7.7e-178, 72.38% id in 630 aa; ATP-dependent DNA helicase RecQ complement(3814140..3816074) Burkholderia pseudomallei K96243 3092367 YP_109814.1 CDS rpoC NC_006350.1 3816188 3820426 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3816188..3820426) Burkholderia pseudomallei K96243 3094314 YP_109815.1 CDS rpoB NC_006350.1 3820448 3824554 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3820448..3824554) Burkholderia pseudomallei K96243 3092566 YP_109816.1 CDS rplL NC_006350.1 3824918 3825250 R Similar to Neisseria meningitidis 50S ribosomal protein L7/L12 RplL or NMA0143 or nmb0131 SWALL:RL7_NEIMA (SWALL:P80716) (122 aa) fasta scores: E(): 4.2e-23, 76.36% id in 110 aa; 50S ribosomal protein L7/L12 complement(3824918..3825250) Burkholderia pseudomallei K96243 3093065 YP_109817.1 CDS rplJ NC_006350.1 3825356 3825853 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3825356..3825853) Burkholderia pseudomallei K96243 3093181 YP_109818.1 CDS rplA NC_006350.1 3826151 3826849 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3826151..3826849) Burkholderia pseudomallei K96243 3094104 YP_109819.1 CDS rplK NC_006350.1 3826850 3827281 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3826850..3827281) Burkholderia pseudomallei K96243 3092790 YP_109820.1 CDS nusG NC_006350.1 3827427 3827984 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3827427..3827984) Burkholderia pseudomallei K96243 3094405 YP_109821.1 CDS secE NC_006350.1 3827986 3828366 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3827986..3828366) Burkholderia pseudomallei K96243 3092983 YP_109822.1 CDS tuf NC_006350.1 3828544 3829734 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3828544..3829734) Burkholderia pseudomallei K96243 3092631 YP_109823.1 CDS BPSL3229 NC_006350.1 3836722 3837999 R Similar to Rhizobium loti secreted protein Mlr4086 SWALL:Q98EU1 (EMBL:AP003003) (426 aa) fasta scores: E(): 1.9e-42, 39.85% id in 419 aa; hypothetical protein complement(3836722..3837999) Burkholderia pseudomallei K96243 3092567 YP_109824.1 CDS paaA NC_006350.1 3838612 3839610 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3838612..3839610 Burkholderia pseudomallei K96243 3091478 YP_109825.1 CDS paaB NC_006350.1 3839673 3839957 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3839673..3839957 Burkholderia pseudomallei K96243 3091479 YP_109826.1 CDS paaC NC_006350.1 3839968 3840771 D Similar to Escherichia coli phenylacetic acid degradation protein PaaC or b1390 SWALL:PAAC_ECOLI (SWALL:P76079) (248 aa) fasta scores: E(): 5e-21, 43.51% id in 262 aa; phenylacetic acid degradation protein PaaC 3839968..3840771 Burkholderia pseudomallei K96243 3092940 YP_109827.1 CDS paaD NC_006350.1 3840807 3841427 D Similar to Escherichia coli phenylacetic acid degradation protein PaaD or b1391 SWALL:PAAD_ECOLI (SWALL:P76080) (167 aa) fasta scores: E(): 1.1e-15, 49.12% id in 171 aa; phenylacetic acid degradation protein PaaD 3840807..3841427 Burkholderia pseudomallei K96243 3092941 YP_109828.1 CDS paaE NC_006350.1 3841429 3842517 D Similar to Escherichia coli probable phenylacetic acid degradation NADH oxidoreductase PaaE or b1392 SWALL:PAAE_ECOLI (SWALL:P76081) (356 aa) fasta scores: E(): 1.9e-58, 47.05% id in 357 aa; phenylacetic acid degradation NADH oxidoreductase PaaE 3841429..3842517 Burkholderia pseudomallei K96243 3092362 YP_109829.1 CDS BPSL3235 NC_006350.1 3842639 3843469 D Similar to Ralstonia solanacearum hypothetical protein Rsc3094 or Rs00547 SWALL:Q8XUU1 (EMBL:AL646073) (264 aa) fasta scores: E(): 2.3e-38, 41.97% id in 274 aa; hypothetical protein 3842639..3843469 Burkholderia pseudomallei K96243 3093303 YP_109830.1 CDS BPSL3236 NC_006350.1 3843496 3844095 D Similar to many eg. Ralstonia solanacearum probable transcription regulator protein Rsp0613 or Rs03754 SWALL:Q8XS68 (EMBL:AL646079) (215 aa) fasta scores: E(): 5.1e-42, 59% id in 200 aa, and to Streptomyces coelicolor TetR-family transcriptional regulator SCO3129 or SCE66.08 SWALL:Q9K3T5 (EMBL:AL359989) (225 aa) fasta scores: E(): 3.6e-06, 27.77% id in 198 aa; TetR family transcriptional regulator 3843496..3844095 Burkholderia pseudomallei K96243 3093304 YP_109831.1 CDS BPSL3237 NC_006350.1 3844299 3844985 D Similar to Ralstonia solanacearum hypothetical protein Rsc3098 or Rs00551 SWALL:Q8XUT7 (EMBL:AL646073) (231 aa) fasta scores: E(): 1.2e-44, 59.34% id in 214 aa; hypothetical protein 3844299..3844985 Burkholderia pseudomallei K96243 3094132 YP_109832.1 CDS BPSL3238 NC_006350.1 3845104 3845619 R Similar to Ralstonia solanacearum probable transcription regulator protein Rsc3102 or Rs00555 SWALL:Q8XUT3 (EMBL:AL646073) (162 aa) fasta scores: E(): 6.2e-19, 65.88% id in 170 aa, and to Escherichia coli leucine-responsive regulatory protein Lrp or b0889 or z1234 or ecs0974 SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 2.5e-10, 43.11% id in 167 aa; AsnC family transcriptional regulator complement(3845104..3845619) Burkholderia pseudomallei K96243 3094133 YP_109833.1 CDS BPSL3239 NC_006350.1 3845771 3846868 D Similar to Pseudomonas sp. 4-hydroxyphenylpyruvate dioxygenase SWALL:HPPD_PSESP (SWALL:P80064) (357 aa) fasta scores: E(): 5.7e-37, 57.89% id in 361 aa; 4-hydroxyphenylpyruvate dioxygenase 3845771..3846868 Burkholderia pseudomallei K96243 3091429 YP_109834.1 CDS BPSL3240 NC_006350.1 3847104 3847301 R outer membrane protein complement(3847104..3847301) Burkholderia pseudomallei K96243 3091430 YP_109835.1 CDS BPSL3241 NC_006350.1 3847621 3851202 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3847621..3851202 Burkholderia pseudomallei K96243 3091567 YP_109836.1 CDS BPSL3242 NC_006350.1 3851722 3853992 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(3851722..3853992) Burkholderia pseudomallei K96243 3091568 YP_109837.1 CDS pyrE NC_006350.1 3854521 3855207 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 3854521..3855207 Burkholderia pseudomallei K96243 3093840 YP_109838.1 CDS BPSL3244 NC_006350.1 3855508 3856104 D Similar to many eg. Salmonella typhimurium outer membrane protein Stm1081 SWALL:Q8ZQ63 (EMBL:AE008747) (182 aa) fasta scores: E(): 1.9e-24, 43.95% id in 182 aa; lipoprotein 3855508..3856104 Burkholderia pseudomallei K96243 3091870 YP_109839.1 CDS BPSL3245 NC_006350.1 3856491 3857066 D Similar to Ralstonia solanacearum Trp repressor binding protein homolog Rsc2207 or Rs01392 SWALL:Q8XXA9 (EMBL:AL646068) (190 aa) fasta scores: E(): 8.1e-48, 65.42% id in 188 aa, and to Escherichia coli flavoprotein WrbA or b1004 SWALL:WRBA_ECOLI (SWALL:P30849) (197 aa) fasta scores: E(): 0.0024, 26.15% id in 195 aa; flavoprotein (regulator) 3856491..3857066 Burkholderia pseudomallei K96243 3091871 YP_109840.1 CDS argC NC_006350.1 3857219 3858163 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3857219..3858163 Burkholderia pseudomallei K96243 3092981 YP_109841.1 CDS BPSL3247 NC_006350.1 3858608 3860011 D lipoprotein 3858608..3860011 Burkholderia pseudomallei K96243 3091902 YP_109842.1 CDS BPSL3248 NC_006350.1 3860137 3861387 D lipoprotein 3860137..3861387 Burkholderia pseudomallei K96243 3091903 YP_109843.1 CDS BPSL3249 NC_006350.1 3861407 3862237 D Similar to Ralstonia solanacearum outer membrane W signal peptide protein OmpW or Rsc3350 or Rs02625 SWALL:Q8XU43 (EMBL:AL646074) (241 aa) fasta scores: E(): 5.7e-11, 40.94% id in 276 aa, and to Escherichia coli outer membrane protein W precursor OmpW or b1256 SWALL:OMPW_ECOLI (SWALL:P21364) (212 aa) fasta scores: E(): 0.36, 24.54% id in 277 aa; outer membrane protein 3861407..3862237 Burkholderia pseudomallei K96243 3094605 YP_109844.1 CDS BPSL3250 NC_006350.1 3862424 3863362 R Similar to Rhizobium loti probable transcriptional regulator Mll2263 SWALL:Q98IT2 (EMBL:AP002999) (304 aa) fasta scores: E(): 7.9e-50, 50.51% id in 291 aa, and to Erwinia carotovora hydrogen peroxide-inducible genes activator OxyR SWALL:OXYR_ERWCA (SWALL:P71318) (302 aa) fasta scores: E(): 4.5e-12, 27.81% id in 302 aa; LysR family transcriptional regulator complement(3862424..3863362) Burkholderia pseudomallei K96243 3094606 YP_109845.1 CDS BPSL3251 NC_006350.1 3863545 3864726 D Similar to Rhizobium loti probable antibiotic resistance protein Mlr2264 SWALL:Q98IT1 (EMBL:AP002999) (407 aa) fasta scores: E(): 1.3e-66, 54.1% id in 390 aa, and to Escherichia coli sugar efflux transporter SotB or b1528 SWALL:SOTB_ECOLI (SWALL:P31122) (396 aa) fasta scores: E(): 2.8e-05, 22.59% id in 385 aa; inner membrane transport protein 3863545..3864726 Burkholderia pseudomallei K96243 3094008 YP_109846.1 CDS BPSL3252 NC_006350.1 3864817 3865575 R Similar to Agrobacterium tumefaciens homoserine/homoserine lactone efflux protein RhtB or Atu1864 or agr_c_3421 SWALL:Q8UE96 (EMBL:AE009140) (273 aa) fasta scores: E(): 5.7e-11, 36.19% id in 221 aa, and to Escherichia coli homoserine/homoserine lactone efflux protein RhtB or b3824 or z5345 or ecs4754 SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 2.8e-08, 33.92% id in 224 aa; amino acid transport protein complement(3864817..3865575) Burkholderia pseudomallei K96243 3094009 YP_109847.1 CDS BPSL3253 NC_006350.1 3865584 3866453 R Similar to Xanthomonas campestris dehydrogenase Xcc0308 SWALL:AAM39627 (EMBL:AE012127) (291 aa) fasta scores: E(): 5e-49, 53.1% id in 290 aa, and to Pseudomonas cruciviae D-threonine dehydrogenase DtdS SWALL:Q9ZNH7 (EMBL:AB015439) (292 aa) fasta scores: E(): 5.4e-14, 29.06% id in 289 aa; oxidoreductase complement(3865584..3866453) Burkholderia pseudomallei K96243 3091993 YP_109848.1 CDS BPSL3254 NC_006350.1 3866580 3867335 D Similar to many eg. Mycobacterium tuberculosis hypothetical protein Rv0579 or Mt0608.1 or mtv039.17 SWALL:O53776 (EMBL:AL021942) (252 aa) fasta scores: E(): 2.8e-35, 45.3% id in 245 aa; hypothetical protein 3866580..3867335 Burkholderia pseudomallei K96243 3091994 YP_109849.1 CDS BPSL3254A NC_006350.1 3867516 3867743 D hypothetical protein 3867516..3867743 Burkholderia pseudomallei K96243 3092086 YP_109850.1 CDS BPSL3254B NC_006350.1 3868783 3869190 D hypothetical protein 3868783..3869190 Burkholderia pseudomallei K96243 3092087 YP_109851.1 CDS BPSL3255 NC_006350.1 3870399 3870716 R hypothetical protein complement(3870399..3870716) Burkholderia pseudomallei K96243 3093734 YP_109852.1 CDS BPSL3256 NC_006350.1 3871231 3872637 D Similar to Pseudomonas aeruginosa probable amino acid permease Pa0789 SWALL:Q9I5E9 (EMBL:AE004514) (471 aa) fasta scores: E(): 1.2e-131, 74.5% id in 451 aa, and to Salmonella typhimurium proline-specific permease ProY or Stm0400 SWALL:PROY_SALTY (SWALL:P37460) (456 aa) fasta scores: E(): 5.6e-98, 56.72% id in 439 aa; amino acid permease 3871231..3872637 Burkholderia pseudomallei K96243 3093735 YP_109853.1 CDS BPSL3257 NC_006350.1 3873083 3874084 D Similar to plasmid and pathogenicity island recombinases eg. Xanthomonas axonopodis shufflon-specific recombinase Rci or Xac2418 SWALL:AAM37269 (EMBL:AE011879) (315 aa) fasta scores: E(): 2.6e-24, 63.96% id in 333 aa, and to Salmonella typhi, and Salmonella dublin Rci or Sty4552 SWALL:O51802 (EMBL:AF000001) (383 aa) fasta scores: E(): 6.2e-07, 34.25% id in 327 aa, and to Escherichia coli shufflon-specific DNA recombinase Rci SWALL:RCI2_ECOLI (SWALL:P16470) (384 aa) fasta scores: E(): 1.3e-06, 35.78% id in 327 aa; plasmid recombinase 3873083..3874084 Burkholderia pseudomallei K96243 3092082 YP_109854.1 CDS BPSL3258 NC_006350.1 3874162 3876582 D Similar to Campylobacter jejuni hypothetical protein RloE SWALL:Q8RN16 (EMBL:AF486555) (800 aa) fasta scores: E(): 3.7e-58, 34.92% id in 839 aa, and to Chlorobium tepidum hypothetical protein Ct0683 SWALL:AAM71921 (EMBL:AE012840) (767 aa) fasta scores: E(): 9e-12, 26.8% id in 802 aa. Contains PF02370 M protein repeats which are associated with virulence in group A Streptococci; hypothetical protein 3874162..3876582 Burkholderia pseudomallei K96243 3092083 YP_109855.1 CDS BPSL3259 NC_006350.1 3876611 3876817 R Similar to Escherichia coli TraD protein traD SWALL:TRD5_ECOLI (SWALL:P27192) (129 aa) fasta scores: E(): 5.7e-05, 56.25% id in 48 aa; plasmid conjugal transfer protein complement(3876611..3876817) Burkholderia pseudomallei K96243 3092740 YP_109856.1 CDS BPSL3260 NC_006350.1 3876826 3877173 R Similar to Pseudomonas aeruginosa hypothetical protein Pa4674 SWALL:Q9HVC1 (EMBL:AE004881) (101 aa) fasta scores: E(): 0.00078, 35.86% id in 92 aa, and to Bacteroides nodosus virulence-associated protein A' VapA' SWALL:VAPZ_BACNO (SWALL:Q46561) (115 aa) fasta scores: E(): 0.0012, 35.29% id in 85 aa; hypothetical protein complement(3876826..3877173) Burkholderia pseudomallei K96243 3092741 YP_109857.1 CDS BPSL3261 NC_006350.1 3877164 3877454 R hypothetical protein complement(3877164..3877454) Burkholderia pseudomallei K96243 3094808 YP_109858.1 CDS BPSL3262 NC_006350.1 3877520 3878950 R Similar to Enterobacter aerogenes IncP plasmid conjugal transfer protein TrbL SWALL:P71187 (EMBL:U67194) (572 aa) fasta scores: E(): 8.9e-53, 44.11% id in 544 aa, and to Escherichia coli IncP plasmid conjugal transfer protein TrbL SWALL:Q03536 (EMBL:M93696) (528 aa) fasta scores: E(): 1.8e-50, 44.82% id in 522 aa; plasmid conjugal transfer protein complement(3877520..3878950) Burkholderia pseudomallei K96243 3094809 YP_109859.1 CDS BPSL3263 NC_006350.1 3879171 3879950 R Similar to Escherichia coli plasmid congugal transfer entry exclusion protein A EexA or TrbJ SWALL:Q03534 (EMBL:M93696) (258 aa) fasta scores: E(): 1.9e-45, 56.03% id in 257 aa, and to Agrobacterium rhizogenes rooting plasmid Riorf126 SWALL:Q9F5C6 (EMBL:AP002086) (265 aa) fasta scores: E(): 1.1e-06, 27.31% id in 205 aa; conjugal transfer protein TrbJ complement(3879171..3879950) Burkholderia pseudomallei K96243 3094415 YP_109860.1 CDS BPSL3264 NC_006350.1 3880126 3882111 R Similar to Escherichia coli RP4 conjugal transfer protein TraI SWALL:TRI5_ECOLI (SWALL:Q00192) (747 aa) fasta scores: E(): 2.6e-124, 52.79% id in 752 aa; conjugal transfer relaxase TraI complement(3880126..3882111) Burkholderia pseudomallei K96243 3094416 YP_109861.1 CDS BPSL3265 NC_006350.1 3882108 3882494 R Similar to Escherichia coli plasmid RP4 conjugal transfer protein TraJ SWALL:TRJ6_ECOLI (SWALL:P17909) (122 aa) fasta scores: E(): 6.9e-26, 66.37% id in 116 aa; conjugal transfer relaxosome component TraJ complement(3882108..3882494) Burkholderia pseudomallei K96243 3092592 YP_109862.1 CDS BPSL3266 NC_006350.1 3882778 3883023 R Doubtful CDS. No significant database matches; hypothetical protein complement(3882778..3883023) Burkholderia pseudomallei K96243 3092593 YP_109863.1 CDS BPSL3267 NC_006350.1 3883136 3883873 D hypothetical protein 3883136..3883873 Burkholderia pseudomallei K96243 3091942 YP_109864.1 CDS BPSL3268 NC_006350.1 3884037 3884951 D hypothetical protein 3884037..3884951 Burkholderia pseudomallei K96243 3091943 YP_109865.1 CDS BPSL3269 NC_006350.1 3884981 3885775 D hypothetical protein 3884981..3885775 Burkholderia pseudomallei K96243 3094869 YP_109866.1 CDS BPSL3270 NC_006350.1 3886322 3887254 R Similar to plasmid replication proteins eg. Escherichia coli broad-host-range plasmid pIPO2T RepA protein SWALL:Q91UU9 (EMBL:AJ297913) (462 aa) fasta scores: E(): 5.3e-50, 43.13% id in 306 aa, and to Shigella flexneri pSa plasmid replication protein RepA SWALL:Q04559 (EMBL:U30471) (323 aa) fasta scores: E(): 8.5e-40, 38.72% id in 297 aa; plasmid replication protein complement(3886322..3887254) Burkholderia pseudomallei K96243 3094870 YP_109867.1 CDS BPSL3271 NC_006350.1 3888315 3888662 R Similar to Pseudomonas aeruginosa cytochrome c-551 precursor NirM or PA0518 SWALL:C551_PSEAE (SWALL:P00099) (104 aa) fasta scores: E(): 3.9e-09, 37.93% id in 87 aa. Possible alternative translational start sites; cytochrome c-551 complement(3888315..3888662) Burkholderia pseudomallei K96243 3093717 YP_109868.1 CDS BPSL3272 NC_006350.1 3888677 3889477 R Similar to Ralstonia solanacearum hypothetical signal peptide protein Rsc3264 or Rs02493 SWALL:Q8XUC7 (EMBL:AL646074) (271 aa) fasta scores: E(): 7.4e-23, 41.79% id in 256 aa; lipoprotein complement(3888677..3889477) Burkholderia pseudomallei K96243 3093718 YP_109869.1 CDS BPSL3273 NC_006350.1 3889496 3890074 R Similar to Pseudomonas aeruginosa probable phosphoheptose isomerase Pa4425 SWALL:Q9HVZ0 (EMBL:AE004857) (197 aa) fasta scores: E(): 3.4e-25, 45.55% id in 191 aa, and to Burkholderia pseudomallei GmhA SWALL:Q93UJ2 (EMBL:AF228583) (197 aa) fasta scores: E(): 6.5e-15, 35.97% id in 189 aa, and to Aneurinibacillus thermoaerophilus sedoheptulose 7-phosphate isomerase GmhA SWALL:Q9AGY7 (EMBL:AF324836) (198 aa) fasta scores: E(): 2.2e-13, 35.75% id in 193 aa; phosphosugar isomerase complement(3889496..3890074) Burkholderia pseudomallei K96243 3092692 YP_109870.1 CDS BPSL3274 NC_006350.1 3890197 3890631 R Similar to many eg. Yersinia pestis hypothetical protein Ypo3549 SWALL:Q8ZB75 (EMBL:AJ414157) (117 aa) fasta scores: E(): 8.5e-18, 55.55% id in 117 aa; hypothetical protein complement(3890197..3890631) Burkholderia pseudomallei K96243 3092693 YP_109871.1 CDS BPSL3275 NC_006350.1 3890678 3891565 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc3266 rsc3266 or rs02495 SWALL:Q8XUC5 (EMBL:AL646074) (300 aa) fasta scores: E(): 2.7e-59, 63.79% id in 290 aa, and to Salmonella typhimurium methyltransferase yral or stm3263 SWALL:Q8ZLU5 (EMBL:AE008850) (287 aa) fasta scores: E(): 1.7e-41, 49.82% id in 281 aa; methylase 3890678..3891565 Burkholderia pseudomallei K96243 3092130 YP_109872.1 CDS BPSL3276 NC_006350.1 3891660 3892295 R Similar to Pseudomonas aeruginosa RlpA-like lipoprotein precursor or Pa4000 SWALL:RLPA_PSEAE (SWALL:Q9X6V6) (342 aa) fasta scores: E(): 1.5e-20, 43.01% id in 186 aa, and to Escherichia coli rare lipoprotein a precursor RlpA or b0633 SWALL:RLPA_ECOLI (SWALL:P10100) (362 aa) fasta scores: E(): 2.5e-09, 39.51% id in 124 aa; RlpA-like lipoprotein complement(3891660..3892295) Burkholderia pseudomallei K96243 3092131 YP_109873.1 CDS BPSL3277 NC_006350.1 3892896 3893540 D Similar to Yersinia pestis metallo-beta-lactamase superfamily protein Ypo1409 SWALL:Q8ZG96 (EMBL:AJ414148) (215 aa) fasta scores: E(): 6.4e-53, 59.15% id in 213 aa; metallo-beta-lactamase superfamily protein 3892896..3893540 Burkholderia pseudomallei K96243 3093505 YP_109874.1 CDS BPSL3278 NC_006350.1 3893537 3894193 D Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc3269 or Rs02498 SWALL:Q8XUC2 (EMBL:AL646074) (226 aa) fasta scores: E(): 1.5e-62, 73.73% id in 198 aa; hypothetical protein 3893537..3894193 Burkholderia pseudomallei K96243 3093506 YP_109875.1 CDS BPSL3279 NC_006350.1 3894251 3894742 D Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3965 SWALL:Q9HX51 (EMBL:AE004814) (169 aa) fasta scores: E(): 4.7e-22, 45.16% id in 155 aa, and to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2.3e-19, 40.66% id in 150 aa; AsnC family transcriptional regulator 3894251..3894742 Burkholderia pseudomallei K96243 3093067 YP_109876.1 CDS BPSL3280 NC_006350.1 3894921 3896111 R Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc3077 or Rs00528 SWALL:Q8XUV6 (EMBL:AL646073) (392 aa) fasta scores: E(): 4e-59, 49.1% id in 389 aa, and to Methanosarcina mazei cobalt-zinc-cadmium resistance protein CzcD or Mm1778 SWALL:AAM31474 (EMBL:AE013414) (323 aa) fasta scores: E(): 7.6e-31, 38.9% id in 293 aa; cation efflux protein complement(3894921..3896111) Burkholderia pseudomallei K96243 3093068 YP_109877.1 CDS BPSL3281 NC_006350.1 3896351 3896644 R Similar to Ralstonia solanacearum HNS-like transcription regulator protein Rsp0335 or Rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 5.6e-14, 52.57% id in 97 aa, and to Rhodobacter sphaeroides SpB=leucine-zipper transcription factor/trans-acting light-dependent negative puf operon regulator Spb SWALL:P95680 (EMBL:S82916) (104 aa) fasta scores: E(): 0.00027, 35.64% id in 101 aa; HNS-like transcriptional regulator complement(3896351..3896644) Burkholderia pseudomallei K96243 3092211 YP_109878.1 CDS BPSL3282 NC_006350.1 3897029 3897835 R Similar to Pseudomonas aeruginosa hypothetical protein Pa4388 SWALL:Q9HW16 (EMBL:AE004854) (244 aa) fasta scores: E(): 1.4e-14, 34.45% id in 209 aa; hypothetical protein complement(3897029..3897835) Burkholderia pseudomallei K96243 3092212 YP_109879.1 CDS BPSL3283 NC_006350.1 3898112 3899230 D Similar to many membrane proteins, e.g. Ralstonia solanacearum transport transmembrane protein Rsc0585 or Rs04878 SWALL:Q8Y1V4 (EMBL:AL646060) (408 aa) fasta scores: E(): 4.8e-58, 48.85% id in 393 aa; hypothetical protein 3898112..3899230 Burkholderia pseudomallei K96243 3094655 YP_109880.1 CDS BPSL3284 NC_006350.1 3899419 3900561 R Similar to Ralstonia solanacearum amino acid-binding periplasmic ABC transporter protein Rsc2441 or Rs01353 SWALL:Q8XWN2 (EMBL:AL646070) (336 aa) fasta scores: E(): 7.2e-88, 74.1% id in 336 aa, and to Escherichia coli leucine-specific binding protein precursor LivK or b3458 SWALL:LIVK_ECOLI (SWALL:P04816) (369 aa) fasta scores: E(): 5.4e-31, 34.77% id in 348 aa; secreted substrate binding protein complement(3899419..3900561) Burkholderia pseudomallei K96243 3094656 YP_109881.1 CDS BPSL3285 NC_006350.1 3901018 3902118 R Similar to many members of a faimily including Xanthomonas campestris 2-nitropropane dioxygenase Xcc1197 SWALL:AAM40495 (EMBL:AE012219) (364 aa) fasta scores: E(): 1.7e-37, 42.73% id in 358 aa, and to Neurospora crassa 2-nitropropane dioxygenase precursor Ncd-2 SWALL:2NPD_NEUCR (SWALL:Q01284) (378 aa) fasta scores: E(): 8.5e-08, 26.87% id in 346 aa; oxidoreductase complement(3901018..3902118) Burkholderia pseudomallei K96243 3092009 YP_109882.1 CDS BPSL3286 NC_006350.1 3902445 3903137 D Similar to Pseudomonas sp. CA10 dienelactone hydrolase SWALL:Q9AQN6 (EMBL:AB047548) (273 aa) fasta scores: E(): 5.3e-32, 45.16% id in 217 aa, and to Pseudomonas putida, and Pseudomonas sp. carboxymethylenebutenolidase ClcD SWALL:CLCD_PSEPU (SWALL:P11453) (236 aa) fasta scores: E(): 9.8e-23, 35.37% id in 229 aa; dienelactone hydrolase 3902445..3903137 Burkholderia pseudomallei K96243 3092010 YP_109883.1 CDS BPSL3287 NC_006350.1 3903233 3904723 D Similar to Flavobacterium sp. 6-aminohexanoate-cyclic-dimer hydrolase NylA SWALL:NYLA_FLASK (SWALL:P13397) (492 aa) fasta scores: E(): 1.8e-41, 36.27% id in 499 aa; amidase 3903233..3904723 Burkholderia pseudomallei K96243 3093499 YP_109884.1 CDS metF NC_006350.1 3904907 3905737 R Similar to Escherichia coli 5,10-methylenetetrahydrofolate reductase MetF or b3941 SWALL:METF_ECOLI (SWALL:P00394) (296 aa) fasta scores: E(): 1.3e-44, 45.98% id in 274 aa; 5,10-methylenetetrahydrofolate reductase complement(3904907..3905737) Burkholderia pseudomallei K96243 3092005 YP_109885.1 CDS BPSL3289 NC_006350.1 3905755 3906108 R Similar to Ralstonia solanacearum probable transmembrane protein Rsc0092 or Rs02279 SWALL:Q8Y388 (EMBL:AL646057) (113 aa) fasta scores: E(): 4.8e-21, 55.85% id in 111 aa; hypothetical protein complement(3905755..3906108) Burkholderia pseudomallei K96243 3093500 YP_109886.1 CDS ahcY NC_006350.1 3906272 3907693 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(3906272..3907693) Burkholderia pseudomallei K96243 3092196 YP_109887.1 CDS fliA NC_006350.1 3908047 3908778 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(3908047..3908778) Burkholderia pseudomallei K96243 3093232 YP_109888.1 CDS flhG NC_006350.1 3908803 3909615 R Similar to Vibrio parahaemolyticus flagellar biosynthesis protein FlhG SWALL:Q9LB16 (EMBL:AF069392) (295 aa) fasta scores: E(): 4.4e-09, 33.33% id in 267 aa; flagellar biosynthesis protein FlhG complement(3908803..3909615) Burkholderia pseudomallei K96243 3093231 YP_109889.1 CDS flhF NC_006350.1 3909608 3911359 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(3909608..3911359) Burkholderia pseudomallei K96243 3092159 YP_109890.1 CDS flhA NC_006350.1 3911356 3913458 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(3911356..3913458) Burkholderia pseudomallei K96243 3091456 YP_109891.1 CDS flhB NC_006350.1 3913455 3914672 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(3913455..3914672) Burkholderia pseudomallei K96243 3091457 YP_109892.1 CDS BPSL3296 NC_006350.1 3915368 3915868 R Similar to Streptomyces coelicolor hypothetical protein SCO7282 or SC5H1.10c SWALL:Q9X7R8 (EMBL:AL049863) (160 aa) fasta scores: E(): 1e-31, 54.14% id in 157 aa; hypothetical protein complement(3915368..3915868) Burkholderia pseudomallei K96243 3094060 YP_109893.1 CDS BPSL3297 NC_006350.1 3916055 3917359 R Gly/Ala/Ser-rich lipoprotein complement(3916055..3917359) Burkholderia pseudomallei K96243 3094061 YP_109894.1 CDS BPSL3298 NC_006350.1 3917382 3917885 R hypothetical protein complement(3917382..3917885) Burkholderia pseudomallei K96243 3093670 YP_109895.1 CDS cheZ NC_006350.1 3918083 3918811 R cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ complement(3918083..3918811) Burkholderia pseudomallei K96243 3092999 YP_109896.1 CDS cheY NC_006350.1 3918813 3919241 R Previously described as Burkholderia pseudomallei CheY SWALL:P94342 (EMBL:U78087) (131 aa) fasta scores: E(): 3.6e-47, 100% id in 131 aa. Similar to Escherichia coli chemotaxis protein CheY or b1882 or z2936 or ecs2592 SWALL:CHEY_ECOLI (SWALL:P06143) (128 aa) fasta scores: E(): 1e-34, 77.59% id in 125 aa; chemotaxis protein CheY complement(3918813..3919241) Burkholderia pseudomallei K96243 3092753 YP_109897.1 CDS cheB NC_006350.1 3919557 3920660 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(3919557..3920660) Burkholderia pseudomallei K96243 3092815 YP_109898.1 CDS BPSL3302 NC_006350.1 3920657 3921361 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(3920657..3921361) Burkholderia pseudomallei K96243 3093671 YP_109899.1 CDS cheR NC_006350.1 3921358 3922305 R Similar to Escherichia coli chemotaxis protein methyltransferase CheR or CheX or b1884 SWALL:CHER_ECOLI (SWALL:P07364) (286 aa) fasta scores: E(): 4.9e-60, 57.51% id in 266 aa; chemotaxis protein methyltransferase complement(3921358..3922305) Burkholderia pseudomallei K96243 3093764 YP_109900.1 CDS tsr NC_006350.1 3922309 3924330 R Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 9e-44, 42.88% id in 541 aa; methyl-accepting chemotaxis protein I complement(3922309..3924330) Burkholderia pseudomallei K96243 3092630 YP_109901.1 CDS cheW NC_006350.1 3924371 3924898 R Previously characterised as Burkholderia pseudomallei chemotaxis protein CheW SWALL:O05183 (EMBL:U92493) (175 aa) fasta scores: E(): 2.1e-66, 100% id in 175 aa, and to Escherichia coli chemotaxis protein CheW or b1887 or z2941 or ecs2597 SWALL:CHEW_ECOLI (SWALL:P07365) (167 aa) fasta scores: E(): 9.8e-39, 71.81% id in 149 aa; chemotaxis protein CheW complement(3924371..3924898) Burkholderia pseudomallei K96243 3092762 YP_109902.1 CDS cheA NC_006350.1 3924929 3927172 R Similar to Escherichia coli chemotaxis protein CheA or b1888 SWALL:CHEA_ECOLI (SWALL:P07363) (654 aa) fasta scores: E(): 9.5e-76, 56.14% id in 741 aa; chemotaxis two-component sensor kinase CheA complement(3924929..3927172) Burkholderia pseudomallei K96243 3092814 YP_109903.1 CDS cheY1 NC_006350.1 3927204 3927584 R Similar to Rhizobium meliloti chemotaxis regulator CheY or R00638 or Smc03006 SWALL:Q52879 (EMBL:U13166) (121 aa) fasta scores: E(): 7.1e-15, 43.8% id in 121 aa; chemotaxis two-component response regulator CheY1 complement(3927204..3927584) Burkholderia pseudomallei K96243 3092754 YP_109904.1 CDS motB NC_006350.1 3927615 3928637 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(3927615..3928637) Burkholderia pseudomallei K96243 3092527 YP_109905.1 CDS motA NC_006350.1 3928654 3929514 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(3928654..3929514) Burkholderia pseudomallei K96243 3092331 YP_109906.1 CDS flhC NC_006350.1 3929708 3930259 R With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC complement(3929708..3930259) Burkholderia pseudomallei K96243 3092108 YP_109907.1 CDS flhD NC_006350.1 3930353 3930673 R with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD complement(3930353..3930673) Burkholderia pseudomallei K96243 3092109 YP_109908.1 CDS BPSL3312 NC_006350.1 3931267 3932331 D Similar to Synechococcus sp. UDP-glucose:tetrahydrobiopterin glucosyltransferase SWALL:Q93EY3 (EMBL:AF331846) (359 aa) fasta scores: E(): 1.6e-18, 31.61% id in 329 aa; glycosyltransferase 3931267..3932331 Burkholderia pseudomallei K96243 3092717 YP_109909.1 CDS BPSL3313 NC_006350.1 3932435 3932731 R Similar to Ralstonia solanacearum HNS-like transcription regulator protein Rsp0335 or Rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 6.6e-15, 53.6% id in 97 aa, and to Escherichia coli Ler Lee-encoded regulator SWALL:Q9AJ33 (EMBL:AF200363) (129 aa) fasta scores: E(): 1.5e-05, 33.66% id in 101 aa, and to Bordetella pertussis Bph3 HNS protein SWALL:O07507 (EMBL:U82566) (123 aa) fasta scores: E(): 0.0053, 36.03% id in 111 aa; HNS-like transcriptional regulator complement(3932435..3932731) Burkholderia pseudomallei K96243 3092718 YP_109910.1 CDS aqpZ NC_006350.1 3933037 3933741 D porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 3933037..3933741 Burkholderia pseudomallei K96243 3093879 YP_109911.1 CDS BPSL3315 NC_006350.1 3933930 3934772 R Similar to Escherichia coli Cof protein or b0446 SWALL:COF_ECOLI (SWALL:P46891) (272 aa) fasta scores: E(): 8.2e-29, 37.16% id in 261 aa; Cof family hydrolase complement(3933930..3934772) Burkholderia pseudomallei K96243 3093598 YP_109912.1 CDS BPSL3316 NC_006350.1 3934869 3935759 R Similar to Rhizobium loti hypothetical protein Mll7250 SWALL:Q986Q7 (EMBL:AP003011) (294 aa) fasta scores: E(): 9.8e-26, 40.13% id in 289 aa; hypothetical protein complement(3934869..3935759) Burkholderia pseudomallei K96243 3093599 YP_109913.1 CDS tag NC_006350.1 3935910 3936518 D Similar to Escherichia coli DNA-3-methyladenine glycosylase I Tag or b3549 SWALL:3MG1_ECOLI (SWALL:P05100) (187 aa) fasta scores: E(): 1.3e-32, 49.44% id in 180 aa, and to Ralstonia solanacearum probable DNA-3-methyladenine glycosylase I protein Tag or Rsp0666 or Rs01783 SWALL:Q8XS15 (EMBL:AL646080) (190 aa) fasta scores: E(): 8.3e-43, 64.97% id in 177 aa; DNA-3-methyladenine glycosylase I 3935910..3936518 Burkholderia pseudomallei K96243 3092286 YP_109914.1 CDS rpsU NC_006350.1 3936905 3937117 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(3936905..3937117) Burkholderia pseudomallei K96243 3094653 YP_109915.1 CDS fliC NC_006350.1 3937675 3938841 D structural flagella protein; Vibrio contains multiple flagellin genes usually localized into two region on the chromosome, flaAC and flaCEDB in V. cholerae, flaFBA and flaCDE in V. parahemolyticus; FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus; flagellin 3937675..3938841 Burkholderia pseudomallei K96243 3094015 YP_109916.1 CDS fliD NC_006350.1 3938991 3940511 D Similar to Escherichia coli flagellar hook-associated protein 2 FliD or FlbC or FlaV or b1924 SWALL:FLID_ECOLI (SWALL:P24216) (467 aa) fasta scores: E(): 1.1e-21, 34.67% id in 496 aa; flagellar hook-associated protein 3938991..3940511 Burkholderia pseudomallei K96243 3094016 YP_109917.1 CDS BPSL3321 NC_006350.1 3940525 3940839 D hypothetical protein 3940525..3940839 Burkholderia pseudomallei K96243 3091872 YP_109918.1 CDS BPSL3322 NC_006350.1 3941062 3943392 D Similar to Caulobacter crescentus TPR domain protein cc0119 SWALL:Q9ABV1 (EMBL:AE005686) (747 aa) fasta scores: E(): 2.3e-74, 35.09% id in 738 aa, and to Petunia hybrida spindly protein Spy involved in signal transduction SWALL:O82039 (EMBL:Y17720) (932 aa) fasta scores: E(): 4e-50, 28.86% id in 776 aa; TPR domain-containing protein 3941062..3943392 Burkholderia pseudomallei K96243 3091873 YP_109919.1 CDS BPSL3323 NC_006350.1 3943389 3944537 D Similar to Xanthomonas axonopodis nucleotide sugar transaminase VioA or Xac1966 SWALL:AAM36828 (EMBL:AE011831) (369 aa) fasta scores: E(): 7.3e-103, 71.03% id in 366 aa, and to Streptomyces antibioticus dehydratase OleNI SWALL:Q9RR26 (EMBL:AF055579) (393 aa) fasta scores: E(): 6.2e-41, 38.48% id in 369 aa; transferase 3943389..3944537 Burkholderia pseudomallei K96243 3091807 YP_109920.1 CDS BPSL3324 NC_006350.1 3944534 3945568 D Similar to Streptomyces coelicolor 3-oxoacyl-[acyl-carrier-protein] synthase sco5888 or sc3f7.08 SWALL:O54151 (EMBL:AL021409) (335 aa) fasta scores: E(): 4.2e-29, 34.44% id in 331 aa, and to Cuphea wrightii 3-oxoacyl-[acyl-carrier-protein] synthase III A, chloroplast precursor Kas3A SWALL:FBH1_CUPWR (SWALL:P49244) (400 aa) fasta scores: E(): 3.2e-27, 31.59% id in 326 aa; keto/oxo acyl-ACP synthase 3944534..3945568 Burkholderia pseudomallei K96243 3091808 YP_109921.1 CDS BPSL3325 NC_006350.1 3945580 3945801 D Similar to Myxococcus xanthus acyl carrier protein AcpP SWALL:ACP_MYXXA (SWALL:P80921) (78 aa) fasta scores: E(): 0.27, 32.85% id in 70 aa; acyl carrier protein 3945580..3945801 Burkholderia pseudomallei K96243 3092928 YP_109922.1 CDS BPSL3326 NC_006350.1 3945804 3946868 D Similar to Streptomyces coelicolor 3-oxoacyl-[acyl-carrier-protein] synthase SCO5888 or SC3F7.08 SWALL:O54151 (EMBL:AL021409) (335 aa) fasta scores: E(): 2.5e-28, 36.2% id in 337 aa, and to Allium porrum 3-ketoacyl carrier protein synthase III SWALL:O04439 (EMBL:U30600) (402 aa) fasta scores: E(): 3.1e-23, 32.33% id in 334 aa; keto/oxo acyl-ACP synthase 3945804..3946868 Burkholderia pseudomallei K96243 3092929 YP_109923.1 CDS BPSL3327 NC_006350.1 3946865 3947629 D Similar to Xanthomonas axonopodis 3-oxoacyl-[ACP] reductase FabG or Xac1963 SWALL:AAM36825 (EMBL:AE011831) (254 aa) fasta scores: E(): 1.2e-26, 44.89% id in 245 aa, and to Azoarcus evansii beta-hydroxyacyl-CoA dehydrogenase SWALL:Q93FC5 (EMBL:AF320253) (269 aa) fasta scores: E(): 1.3e-15, 36.65% id in 251 aa; short chain dehydrogenase 3946865..3947629 Burkholderia pseudomallei K96243 3093032 YP_109924.1 CDS BPSL3328 NC_006350.1 3947629 3948261 D Similar to Caulobacter crescentus acetyltransferase LpsB or cc1011 SWALL:O85353 (EMBL:AF062345) (215 aa) fasta scores: E(): 2.4e-15, 34.28% id in 210 aa, and to Escherichia coli WbdR or WbhH or z3192 or ecs2831 SWALL:O85344 (EMBL:AF061251) (221 aa) fasta scores: E(): 1.4e-09, 27.35% id in 212 aa; acetyltransferase 3947629..3948261 Burkholderia pseudomallei K96243 3093033 YP_109925.1 CDS BPSL3329 NC_006350.1 3948263 3949327 D Similar to Caulobacter crescentus rieske 2Fe-2S family protein cc3122 SWALL:Q9A3T0 (EMBL:AE005975) (404 aa) fasta scores: E(): 1.9e-11, 25.7% id in 354 aa; Rieske (2Fe-2S) domain-containing protein 3948263..3949327 Burkholderia pseudomallei K96243 3091788 YP_109926.1 CDS BPSL3330 NC_006350.1 3949407 3950144 R hypothetical protein complement(3949407..3950144) Burkholderia pseudomallei K96243 3091789 YP_109927.1 CDS BPSL3331 NC_006350.1 3950469 3950867 R outer membrane protein complement(3950469..3950867) Burkholderia pseudomallei K96243 3091768 YP_109928.1 CDS BPSL3332 NC_006350.1 3951436 3952059 D Similar to Ralstonia solanacearum Rsc0231 or Rs00662 SWALL:Q8Y2V1 (EMBL:AL646058) (211 aa) fasta scores: E(): 8e-54, 74.51% id in 208 aa, and to Escherichia coli homoserine/homoserine lactone efflux protein RhtB or b3824 or z5345 or ecs4754 SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 2.7e-13, 31.68% id in 202 aa; amino acid efflux protein 3951436..3952059 Burkholderia pseudomallei K96243 3091769 YP_109929.1 CDS acpA NC_006350.1 3952360 3954093 R Previously described as Burkholderia pseudomallei acid phosphatase AcpA SWALL:Q9L5C5 (EMBL:AF252862) (577 aa) fasta scores: E(): 0, 99.48% id in 577 aa; acid phosphatase complement(3952360..3954093) Burkholderia pseudomallei K96243 3094515 YP_109930.1 CDS BPSL3334 NC_006350.1 3954560 3955246 R Similar to Ralstonia solanacearum probable lipoprotein Rsp0675 or Rs01774 SWALL:Q8XS06 (EMBL:AL646080) (223 aa) fasta scores: E(): 6.9e-51, 63.72% id in 215 aa; lipoprotein complement(3954560..3955246) Burkholderia pseudomallei K96243 3093617 YP_109931.1 CDS BPSL3335 NC_006350.1 3955243 3955671 R Similar to Ralstonia solanacearum probable lipoprotein Rsp0674 or Rs01775 SWALL:Q8XS07 (EMBL:AL646080) (125 aa) fasta scores: E(): 4.4e-17, 52.94% id in 119 aa; lipoprotein complement(3955243..3955671) Burkholderia pseudomallei K96243 3093618 YP_109932.1 CDS BPSL3336 NC_006350.1 3955731 3956408 R Similar to Ralstonia solanacearum probable lipoprotein Rsp0673 or Rs01776 SWALL:Q8XS08 (EMBL:AL646080) (227 aa) fasta scores: E(): 4.3e-52, 68.32% id in 221 aa; lipoprotein complement(3955731..3956408) Burkholderia pseudomallei K96243 3091784 YP_109933.1 CDS BPSL3337 NC_006350.1 3957454 3958275 D Similar to Xanthomonas campestris beta-ketoadipate enol-lactone hydrolase PcaD or Xcc1864 SWALL:AAM41153 (EMBL:AE012288) (271 aa) fasta scores: E(): 4.5e-60, 57.09% id in 268 aa, and to Pseudomonas sp. 3-oxoadipate enol-lactone hydrolase CatD SWALL:Q8VPF0 (EMBL:AY044272) (262 aa) fasta scores: E(): 2.7e-13, 31.5% id in 273 aa; hydrolase 3957454..3958275 Burkholderia pseudomallei K96243 3091785 YP_109934.1 CDS BPSL3338 NC_006350.1 3958328 3960145 R Similar to Yersinia pestis methyl-accepting chemotaxis protein Tsr2 or ypo1229 SWALL:Q8ZGQ7 (EMBL:AJ414147) (595 aa) fasta scores: E(): 2e-125, 64.33% id in 600 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 6.1e-49, 49.18% id in 368 aa; methyl-accepting chemotaxis protein complement(3958328..3960145) Burkholderia pseudomallei K96243 3094879 YP_109935.1 CDS BPSL3339 NC_006350.1 3960414 3962075 R Similar to Yersinia pestis oxidoreductase Ypo0308 SWALL:Q8ZJ22 (EMBL:AJ414142) (685 aa) fasta scores: E(): 8e-110, 54.69% id in 554 aa, and to Chondrus crispus hexose oxidase SWALL:P93762 (EMBL:U89770) (546 aa) fasta scores: E(): 7e-32, 34.74% id in 567 aa; oxidoreductase complement(3960414..3962075) Burkholderia pseudomallei K96243 3094880 YP_109936.1 CDS BPSL3340 NC_006350.1 3962264 3962965 R Similar to Serratia marcescens Cbp21 chitin-binding protein SWALL:O83009 (EMBL:AB015998) (197 aa) fasta scores: E(): 0.00011, 35.17% id in 199 aa; chitin-binding protein complement(3962264..3962965) Burkholderia pseudomallei K96243 3093787 YP_109937.1 CDS BPSL3341 NC_006350.1 3963415 3963732 R hypothetical protein complement(3963415..3963732) Burkholderia pseudomallei K96243 3093788 YP_109938.1 CDS BPSL3342 NC_006350.1 3964455 3966017 R Similar to Salmonella typhimurium IbfA protein SWALL:BAB91598 (EMBL:AP005147) (518 aa) fasta scores: E(): 1.1e-14, 25.86% id in 491 aa, and to Bacteriophage lambda EA59 protein SWALL:VE59_LAMBD (SWALL:P03754) (525 aa) fasta scores: E(): 0.67, 24.57% id in 293 aa; bacteriophage protein complement(3964455..3966017) Burkholderia pseudomallei K96243 3093410 YP_109939.1 CDS BPSL3343 NC_006350.1 3966423 3966782 R Similar to Yersinia pestis phage protein Ypo2321 SWALL:Q8ZE62 (EMBL:AJ414152) (104 aa) fasta scores: E(): 1.3e-11, 41.48% id in 94 aa, and to Bacteriophage N15 Gp49 protein SWALL:O64357 (EMBL:AF064539) (103 aa) fasta scores: E(): 6.5e-11, 44.82% id in 87 aa; bacteriophage protein complement(3966423..3966782) Burkholderia pseudomallei K96243 3093411 YP_109940.1 CDS BPSL3344 NC_006350.1 3966797 3967651 R Similar to Bacteriophage D3 integrase orf35 SWALL:Q9T1P3 (EMBL:AF165214) (369 aa) fasta scores: E(): 2.9e-44, 44.8% id in 279 aa, and to Escherichia coli prophage Dlp12 integrase IntD or Int or b0537 SWALL:INTD_ECOLI (SWALL:P24218) (387 aa) fasta scores: E(): 3.3e-18, 36.64% id in 191 aa; bacteriophage integrase complement(3966797..3967651) Burkholderia pseudomallei K96243 3094700 YP_109941.1 CDS BPSL3345 NC_006350.1 3967732 3968511 R Weakly similar to Brevibacillus borstelensis cryptic plasmid pHT926 Rep protein SWALL:Q52178 (EMBL:D43692) (281 aa) fasta scores: E(): 0.032, 26.04% id in 192 aa; bacteriophage-like protein complement(3967732..3968511) Burkholderia pseudomallei K96243 3094701 YP_109942.1 CDS BPSL3346 NC_006350.1 3968968 3969459 R No significant database matches. Possible coiled-coil region at residues 41-58.; hypothetical protein complement(3968968..3969459) Burkholderia pseudomallei K96243 3093754 YP_109943.1 CDS BPSL3347 NC_006350.1 3969661 3971037 R Similar to Yersinia pestis phage-related secreted protein Ypo2280 SWALL:Q8ZEA2 (EMBL:AJ414151) (414 aa) fasta scores: E(): 4.5e-26, 32.17% id in 401 aa, and to Bacteriophage M13 IV protein SWALL:VG4_BPM13 (SWALL:P03665) (426 aa) fasta scores: E(): 1.1e-08, 23.81% id in 252 aa; bacteriophage-related lipoprotein complement(3969661..3971037) Burkholderia pseudomallei K96243 3093755 YP_109944.1 CDS BPSL3348 NC_006350.1 3971034 3971939 R Similar to Bacteriophage Pf3 32.7 kDa protein SWALL:VG30_BPPF3 (SWALL:P03626) (301 aa) fasta scores: E(): 9.6e-18, 34.63% id in 257 aa; bacteriophage protein complement(3971034..3971939) Burkholderia pseudomallei K96243 3092508 YP_109945.1 CDS BPSL3349 NC_006350.1 3972214 3973947 R No significant database matches. Contains 14 x NPTG repeat at residues 413-468.; hypothetical protein complement(3972214..3973947) Burkholderia pseudomallei K96243 3092509 YP_109946.1 CDS BPSL3350 NC_006350.1 3974011 3974325 R hypothetical protein complement(3974011..3974325) Burkholderia pseudomallei K96243 3092806 YP_109947.1 CDS BPSL3351 NC_006350.1 3974401 3974607 R Similar to Xylella fastidiosa hypothetical protein Xf1878 SWALL:Q9PCA3 (EMBL:AE004008) (73 aa) fasta scores: E(): 0.25, 32.25% id in 62 aa, and to Bacteriophage Pf3 major coat protein SWALL:COAT_BPPF3 (SWALL:P03623) (44 aa) fasta scores: E(): 5.9, 32.43% id in 37 aa; bacteriophage coat protein complement(3974401..3974607) Burkholderia pseudomallei K96243 3092807 YP_109948.1 CDS BPSL3352 NC_006350.1 3974691 3974993 R hypothetical protein complement(3974691..3974993) Burkholderia pseudomallei K96243 3092774 YP_109949.1 CDS BPSL3354 NC_006350.1 3976225 3977124 D Similar to Ralstonia solanacearum probable transmembrane protein Rsc3084 or Rs00536 SWALL:Q8XUU9 (EMBL:AL646073) (294 aa) fasta scores: E(): 7.1e-50, 57.75% id in 303 aa, and to Neisseria meningitidis cytochrome NMA1936 SWALL:Q9JT84 (EMBL:AL162757) (279 aa) fasta scores: E(): 5.8e-09, 36.67% id in 289 aa, and to Chlorobium limicola f.sp. thiosulfatophilum cytochrome c-555 SWALL:C555_CHLLT (SWALL:P00123) (86 aa) fasta scores: E(): 6.3e-06, 45.23% id in 84 aa; cytochrome 3976225..3977124 Burkholderia pseudomallei K96243 3094567 YP_109950.1 CDS rep NC_006350.1 3977437 3979524 R Similar to Escherichia coli ATP-dependent DNA helicase Rep or b3778 SWALL:REP_ECOLI (SWALL:P09980) (673 aa) fasta scores: E(): 1.6e-75, 47.07% id in 701 aa; ATP-dependent DNA helicase Rep complement(3977437..3979524) Burkholderia pseudomallei K96243 3093146 YP_109951.1 CDS BPSL3356 NC_006350.1 3979774 3980622 D Similar to Streptomyces coelicolor membrane protein SCO0619 or SCF56.03 SWALL:Q9RD63 (EMBL:AL133424) (247 aa) fasta scores: E(): 0.092, 32.53% id in 249 aa; hypothetical protein 3979774..3980622 Burkholderia pseudomallei K96243 3094568 YP_109952.1 CDS BPSL3357 NC_006350.1 3980619 3981422 D Similar to Pseudomonas aeruginosa hypothetical protein Pa3750 SWALL:Q9HXP4 (EMBL:AE004794) (249 aa) fasta scores: E(): 3.9e-18, 40.08% id in 227 aa; hypothetical protein 3980619..3981422 Burkholderia pseudomallei K96243 3093672 YP_109953.1 CDS BPSL3358 NC_006350.1 3981885 3982988 D Similar to many predicted oxidoreductases eg. Yersinia pestis oxidoreductase Ypo2259 SWALL:Q8ZEC1 (EMBL:AJ414151) (349 aa) fasta scores: E(): 5.5e-54, 43.93% id in 346 aa; oxidoreductase 3981885..3982988 Burkholderia pseudomallei K96243 3093673 YP_109954.1 CDS BPSL3359 NC_006350.1 3983160 3983519 D Similar to Ralstonia solanacearum probable lipoprotein Rsc1586 or Rs03948 SWALL:Q8XZ20 (EMBL:AL646065) (118 aa) fasta scores: E(): 5e-14, 52.54% id in 118 aa; lipoprotein 3983160..3983519 Burkholderia pseudomallei K96243 3092991 YP_109955.1 CDS gcvT NC_006350.1 3984376 3985494 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3984376..3985494 Burkholderia pseudomallei K96243 3092626 YP_109956.1 CDS gcvH NC_006350.1 3985588 3985968 D Similar to Escherichia coli glycine cleavage system H protein GcvH or b2904 or z4241 or ecs3775 or sty3210 SWALL:GCSH_ECOLI (SWALL:P23884) (128 aa) fasta scores: E(): 7.9e-26, 60.8% id in 125 aa; glycine cleavage system H protein 3985588..3985968 Burkholderia pseudomallei K96243 3092123 YP_109957.1 CDS gcvP NC_006350.1 3986567 3989494 D decarboxylating; acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3986567..3989494 Burkholderia pseudomallei K96243 3092605 YP_109958.1 CDS BPSL3363 NC_006350.1 3989646 3990764 D No significant database similarities; hypothetical protein 3989646..3990764 Burkholderia pseudomallei K96243 3092992 YP_109959.1 CDS sdaA NC_006350.1 3990798 3992186 D Similar to Escherichia coli L-serine dehydratase 1 SdaA or b1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 1.7e-86, 52.7% id in 463 aa; L-serine dehydratase I 3990798..3992186 Burkholderia pseudomallei K96243 3092280 YP_109960.1 CDS BPSL3365 NC_006350.1 3992221 3993402 R Weakly similar to Neisseria gonorrhoeae hypothetical 33.4 kDa protein SWALL:Q93NE6 (EMBL:AF374415) (289 aa) fasta scores: E(): 3.4e-07, 31% id in 229 aa; hypothetical protein complement(3992221..3993402) Burkholderia pseudomallei K96243 3092863 YP_109961.1 CDS ilvG NC_006350.1 3993626 3995329 D catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 3993626..3995329 Burkholderia pseudomallei K96243 3094327 YP_109962.1 CDS BPSL3367 NC_006350.1 3995358 3996425 D No significant database similarities; hypothetical protein 3995358..3996425 Burkholderia pseudomallei K96243 3092864 YP_109963.1 CDS BPSL3368 NC_006350.1 3996544 3997623 R Similar to Salmonella typhimurium ethanolamine operon regulatory protein EutR or Stm2454 SWALL:EUTR_SALTY (SWALL:Q9ZFU7) (350 aa) fasta scores: E(): 4.5e-37, 41.08% id in 314 aa; AraC family transcriptional regulator complement(3996544..3997623) Burkholderia pseudomallei K96243 3094237 YP_109964.1 CDS acoD NC_006350.1 3997868 3999388 D Similar to Alcaligenes eutrophus acetaldehyde dehydrogenase II AcoD SWALL:DHA2_ALCEU (SWALL:P46368) (506 aa) fasta scores: E(): 5.2e-172, 81.02% id in 506 aa; acetaldehyde dehydrogenase 3997868..3999388 Burkholderia pseudomallei K96243 3092657 YP_109965.1 CDS BPSL3370 NC_006350.1 3999653 3999898 R No significant database similarities; hypothetical protein complement(3999653..3999898) Burkholderia pseudomallei K96243 3094238 YP_109966.1 CDS eutC NC_006350.1 3999964 4000767 R catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit complement(3999964..4000767) Burkholderia pseudomallei K96243 3092872 YP_109967.1 CDS eutB NC_006350.1 4000764 4002161 R Similar to Salmonella typhimurium ethanolamine ammonia-lyase heavy chain EutB or Stm2458 SWALL:EUTB_SALTY (SWALL:P19264) (453 aa) fasta scores: E(): 3.2e-85, 52.24% id in 446 aa; ethanolamine ammonia-lyase heavy chain complement(4000764..4002161) Burkholderia pseudomallei K96243 3091794 YP_109968.1 CDS BPSL3373 NC_006350.1 4002218 4003627 R Lies upstream of a CDS for ethanolamine utilisation. Similar to Xanthomonas campestris ethanolamin permease EutP or Xcc2259 SWALL:AAM41538 (EMBL:AE012333) (454 aa) fasta scores: E(): 3.4e-119, 72.66% id in 428 aa, and to Rhodococcus erythropolis ethanolamine permease EutP SWALL:Q53148 (EMBL:L24492) (488 aa) fasta scores: E(): 1.6e-38, 35.46% id in 454 aa; ethanolamine permease complement(4002218..4003627) Burkholderia pseudomallei K96243 3094269 YP_109969.1 CDS BPSL3374 NC_006350.1 4004245 4005423 D Similar to Rhizobium loti hypothetical protein Mll4680 SWALL:Q98DJ2 (EMBL:AP003004) (576 aa) fasta scores: E(): 1.4e-06, 28.52% id in 305 aa; hypothetical protein 4004245..4005423 Burkholderia pseudomallei K96243 3094270 YP_109970.1 CDS BPSL3375 NC_006350.1 4005463 4005645 D Doubtful CDS. No significant database similarities; hypothetical protein 4005463..4005645 Burkholderia pseudomallei K96243 3092847 YP_109971.1 CDS BPSL3376 NC_006350.1 4005796 4007307 R Similar to Ralstonia solanacearum probable transmembrane protein Rsp1274 or Rs05319 SWALL:Q8XQF3 (EMBL:AL646083) (487 aa) fasta scores: E(): 1e-150, 84.88% id in 483 aa; hypothetical protein complement(4005796..4007307) Burkholderia pseudomallei K96243 3092848 YP_109972.1 CDS BPSL3378 NC_006350.1 4008608 4011118 R Similar to Pseudomonas putida CadA SWALL:Q93TP6 (EMBL:AF333961) (737 aa) fasta scores: E(): 4e-100, 65.9% id in 745 aa, and to Ralstonia metallidurans Pb-efflux ATPase PbrA SWALL:Q9AKR5 (EMBL:AJ278984) (798 aa) fasta scores: E(): 1.1e-93, 66.94% id in 714 aa, and to Staphylococcus aureus probable cadmium-transporting ATPase CadA SWALL:CADD_STAAU (SWALL:P37386) (804 aa) fasta scores: E(): 2.8e-88, 40.3% id in 722 aa. CDS is extended at the N-terminus in comparison to orthologues; heavy metal resistance membrane ATPase complement(4008608..4011118) Burkholderia pseudomallei K96243 3094359 YP_109973.1 CDS BPSL3379 NC_006350.1 4011201 4011632 D Similar to Escherichia coli, and Escherichia coli O157:H7 Zn(ii)-responsive regulator of zntA ZntR SWALL:ZNTR_ECOLI (SWALL:P36676) (141 aa) fasta scores: E(): 3.8e-13, 39.06% id in 128 aa, and to Pseudomonas putida MerR family response regulator of cadmium resistance CadR SWALL:Q93TP7 (EMBL:AF333961) (147 aa) fasta scores: E(): 3e-28, 58.33% id in 144 aa; MerR family regulatory protein 4011201..4011632 Burkholderia pseudomallei K96243 3094360 YP_109974.1 CDS BPSL3380 NC_006350.1 4011732 4012373 D Similar to Rhizobium leguminosarum hypothetical 12.6 kDa protein SWALL:Q9XAT0 (EMBL:AJ243305) (106 aa) fasta scores: E(): 3.1e-18, 58.82% id in 102 aa, and to Streptomyces argillaceus mithramycin resistance determinant, ATP-binding protein SWALL:Q53625 (EMBL:U43537) (219 aa) fasta scores: E(): 8.8e-18, 36.81% id in 201 aa; PadR transcriptional regulator 4011732..4012373 Burkholderia pseudomallei K96243 3091546 YP_109975.1 CDS BPSL3383 NC_006350.1 4013381 4014175 R Similar to Salmonella typhimurium lysine-arginine-ornithine-binding periplasmic protein precursor ArgT or stm2355 SWALL:ARGT_SALTY (SWALL:P02911) (260 aa) fasta scores: E(): 2.2e-40, 46.36% id in 261 aa; amino acid-binding periplasmic transport protein complement(4013381..4014175) Burkholderia pseudomallei K96243 3091948 YP_109976.1 CDS BPSL3384 NC_006350.1 4014229 4015419 R catalyzes the transfer of an amino moiety; aminotransferase complement(4014229..4015419) Burkholderia pseudomallei K96243 3091949 YP_109977.1 CDS BPSL3385 NC_006350.1 4016266 4017015 R Similar to many eg. Rhizobium meliloti regulatory protein BetI or R00950 or Smc00095 SWALL:BETI_RHIME (SWALL:O69786) (203 aa) fasta scores: E(): 0.012, 29.32% id in 208 aa; TetR family transcriptional regulator complement(4016266..4017015) Burkholderia pseudomallei K96243 3092065 YP_109978.1 CDS BPSL3386 NC_006350.1 4017014 4018654 D Similar to Burkholderia pseudomallei acyl-CoA dehydrogenase AidB SWALL:Q9ANZ8 (EMBL:AF317886) (554 aa) fasta scores: E(): 5.7e-123, 60.94% id in 553 aa, and to Escherichia coli AidB or b4187 SWALL:AIDB_ECOLI (SWALL:P33224) (541 aa) fasta scores: E(): 2.7e-82, 46.48% id in 512 aa; acyl-CoA dehydrogenase 4017014..4018654 Burkholderia pseudomallei K96243 3092066 YP_109979.1 CDS BPSL3387 NC_006350.1 4018770 4020317 D Similar to Rhizobium leguminosarum malonyl CoA synthetase MatB SWALL:Q9ZIP5 (EMBL:AF117694) (504 aa) fasta scores: E(): 2e-34, 33.46% id in 505 aa; fatty-acid CoA ligase 4018770..4020317 Burkholderia pseudomallei K96243 3093894 YP_109980.1 CDS BPSL3388 NC_006350.1 4020565 4021704 R Similar to Ralstonia solanacearum amino-acid transport signal peptide protein Rsc3300 or Rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 2.9e-92, 71.11% id in 367 aa, and to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or Pa1074 SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 3.2e-32, 34.85% id in 373 aa; periplasmic amino acid binding transport protein complement(4020565..4021704) Burkholderia pseudomallei K96243 3093895 YP_109981.1 CDS putA NC_006350.1 4021789 4025718 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(4021789..4025718) Burkholderia pseudomallei K96243 3092967 YP_109982.1 CDS BPSL3389A NC_006350.1 4026002 4026172 D Possible gene remnant. Similar to an internal region of Rhizobium meliloti ABC transporter permease SMA0081 SWALL:Q931A4 (EMBL:AE007198) (218 aa) fasta scores: E(): 8.4, 34.69% id in 49 aa; hypothetical protein 4026002..4026172 Burkholderia pseudomallei K96243 3093511 YP_109983.1 CDS priA NC_006350.1 4026183 4028450 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(4026183..4028450) Burkholderia pseudomallei K96243 3092247 YP_109984.1 CDS hemE NC_006350.1 4028891 4029985 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(4028891..4029985) Burkholderia pseudomallei K96243 3092343 YP_109985.1 CDS pheC NC_006350.1 4030125 4030910 D Similar to Pseudomonas aeruginosa cyclohexadienyl dehydratase precursor [includes: prephenate dehydratase (EC 4.2.1.51); arogenate dehydratase (EC 4.-.-.-)] PheC or Pa3475 SWALL:PHEC_PSEAE (SWALL:Q01269) (268 aa) fasta scores: E(): 3.4e-53, 54.33% id in 254 aa; cyclohexadienyl dehydratase 4030125..4030910 Burkholderia pseudomallei K96243 3092973 YP_109986.1 CDS BPSL3393 NC_006350.1 4031110 4031424 R Similar to many hypotheticals though shorter in the N-terminus. Similar to Ralstonia solanacearum hypothetical protein Rsc3313 or Rs02543 SWALL:Q8XU80 (EMBL:AL646074) (153 aa) fasta scores: E(): 3.7e-14, 52.47% id in 101 aa, and to Escherichia coli protein YccU or b0965 SWALL:YCCU_ECOLI (SWALL:P75874) (137 aa) fasta scores: E(): 1.8e-11, 46.8% id in 94 aa. Possible gene remnant; hypothetical protein complement(4031110..4031424) Burkholderia pseudomallei K96243 3093512 YP_109987.1 CDS BPSL3394 NC_006350.1 4032011 4033741 R activates fatty acids by binding to coenzyme A; AMP-binding protein complement(4032011..4033741) Burkholderia pseudomallei K96243 3094034 YP_109988.1 CDS atpC NC_006350.1 4033974 4034399 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon complement(4033974..4034399) Burkholderia pseudomallei K96243 3093523 YP_109989.1 CDS atpD NC_006350.1 4034643 4036037 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta complement(4034643..4036037) Burkholderia pseudomallei K96243 3093524 YP_109990.1 CDS atpG NC_006350.1 4036117 4036992 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma complement(4036117..4036992) Burkholderia pseudomallei K96243 3092777 YP_109991.1 CDS atpA NC_006350.1 4037064 4038605 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha complement(4037064..4038605) Burkholderia pseudomallei K96243 3092610 YP_109992.1 CDS atpH NC_006350.1 4038652 4039191 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta complement(4038652..4039191) Burkholderia pseudomallei K96243 3092138 YP_109993.1 CDS atpF NC_006350.1 4039194 4039634 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B complement(4039194..4039634) Burkholderia pseudomallei K96243 3092776 YP_109994.1 CDS atpE NC_006350.1 4039792 4040067 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C complement(4039792..4040067) Burkholderia pseudomallei K96243 3094555 YP_109995.1 CDS atpB NC_006350.1 4040138 4041007 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A complement(4040138..4041007) Burkholderia pseudomallei K96243 3092611 YP_109996.1 CDS BPSL3403 NC_006350.1 4041102 4041632 R Note possible downstream alternative start codons. Full length similarity to Ralstonia solanacearum hypothetical transmembrane protein Rsc3324 or Rs02554 SWALL:Q8XU69 (EMBL:AL646074) (190 aa) fasta scores: E(): 5.1e-17, 39.34% id in 183 aa. N-terminally truncated version similar to Pseudomonas aeruginosa ATP synthase I AtpI or Pa5561 SWALL:Q9HT13 (EMBL:AE004967) (126 aa) fasta scores: E(): 3.9e-06, 36.2% id in 116 aa.; ATP synthase I AtpI complement(4041102..4041632) Burkholderia pseudomallei K96243 3094035 YP_109997.1 CDS BPSL3404 NC_006350.1 4041903 4043054 R Similar to Ralstonia solanacearum probable transmembrane protein Rsp0802 or Rs01905 SWALL:Q8XRM9 (EMBL:AL646080) (408 aa) fasta scores: E(): 5.6e-56, 45.69% id in 372 aa; hypothetical protein complement(4041903..4043054) Burkholderia pseudomallei K96243 3093928 YP_109998.1 CDS BPSL3405 NC_006350.1 4043044 4043931 R Similar to Ralstonia solanacearum chromosome partitioning protein ParB or Rsc3325 or Rs02555 SWALL:Q8XU68 (EMBL:AL646074) (303 aa) fasta scores: E(): 2.3e-72, 73.12% id in 294 aa, and to Caulobacter crescentus chromosome partitioning protein ParB or Cc3752 SWALL:PARB_CAUCR (SWALL:O05190) (294 aa) fasta scores: E(): 3.8e-32, 42.42% id in 297 aa; chromosome partitioning protein ParB complement(4043044..4043931) Burkholderia pseudomallei K96243 3093929 YP_109999.1 CDS BPSL3406 NC_006350.1 4043967 4044761 R Similar to Ralstonia solanacearum chromosome partitioning protein ParA or rsc3326 or Rs02560 SWALL:Q8XU67 (EMBL:AL646074) (261 aa) fasta scores: E(): 3.2e-75, 79.29% id in 256 aa, and to Caulobacter crescentus chromosome partitioning protein ParA or Cc3753 SWALL:PARA_CAUCR (SWALL:O05189) (267 aa) fasta scores: E(): 1.8e-43, 49.21% id in 254 aa; chromosome partitioning protein ParA complement(4043967..4044761) Burkholderia pseudomallei K96243 3092031 YP_110000.1 CDS gidB NC_006350.1 4044790 4045482 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(4044790..4045482) Burkholderia pseudomallei K96243 3093323 YP_110001.1 CDS gidA NC_006350.1 4045485 4047458 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(4045485..4047458) Burkholderia pseudomallei K96243 3092627 YP_110002.1 CDS BPSL3409 NC_006350.1 4047620 4048375 R Similar to Ralstonia solanacearum probable amino-acid composite ATP-binding transmembrane ABC transporter protein Rsp0707 or Rs01742 SWALL:Q8XRX4 (EMBL:AL646080) (247 aa) fasta scores: E(): 3.2e-59, 78.6% id in 243 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or Pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 4.4e-31, 47.05% id in 238 aa; branched-chain amino acid ABC transporter ATP-binding subunit complement(4047620..4048375) Burkholderia pseudomallei K96243 3092032 YP_110003.1 CDS BPSL3410 NC_006350.1 4048378 4050162 R Similar to Ralstonia solanacearum probable amino-acid composite ATP-binding transmembrane ABC transporter protein Rsp0706 or Rs01743 SWALL:Q8XRX5 (EMBL:AL646080) (608 aa) fasta scores: E(): 2.1e-134, 73.89% id in 586 aa; branched-chain amino acid ABC transporter complement(4048378..4050162) Burkholderia pseudomallei K96243 3094685 YP_110004.1 CDS BPSL3411 NC_006350.1 4050167 4051222 R Similar to Ralstonia solanacearum probable amino-acid transmembrane ABC transporter protein rsp0705 or rs01744 SWALL:Q8XRX6 (EMBL:AL646080) (350 aa) fasta scores: E(): 9.9e-85, 68.57% id in 350 aa; branched-chain amino acid ABC transporter permease complement(4050167..4051222) Burkholderia pseudomallei K96243 3094686 YP_110005.1 CDS BPSL3412 NC_006350.1 4051535 4052692 R Similar to predicted amino-acid-binding periplasmic proteins eg. Ralstonia solanacearum probable amino-acid-binding periplasmic Rsc3329 or Rs02563 SWALL:Q8XU64 (EMBL:AL646074) (382 aa) fasta scores: E(): 3.5e-93, 67.62% id in 383 aa; branched-chain amino acid ABC transporter periplasmic protein complement(4051535..4052692) Burkholderia pseudomallei K96243 3093378 YP_110006.1 CDS BPSL3413 NC_006350.1 4053013 4054248 R Weakly similar to Ralstonia solanacearum probable amino-acid-binding periplasmic Rsc3329 or Rs02563 SWALL:Q8XU64 (EMBL:AL646074) (382 aa) fasta scores: E(): 1.4e-06, 27.41% id in 372 aa. Lies within a amino acid transport operon but does not show any other evidence of association with transport; hypothetical protein complement(4053013..4054248) Burkholderia pseudomallei K96243 3093379 YP_110007.1 CDS BPSL3414 NC_006350.1 4054658 4055635 R Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein Rsc3340 or Rs02575 SWALL:Q8XU53 (EMBL:AL646074) (328 aa) fasta scores: E(): 1.5e-83, 71.6% id in 317 aa; branched-chain amino acid ABC transporter integral membrane subunit complement(4054658..4055635) Burkholderia pseudomallei K96243 3093112 YP_110008.1 CDS BPSL3415 NC_006350.1 4055632 4056516 R Similar to many eg. Ralstonia solanacearum probable transmembrane ABC transporter protein Rsc3341 or Rs02576 SWALL:Q8XU52 (EMBL:AL646074) (313 aa) fasta scores: E(): 5e-89, 82.99% id in 294 aa; branched-chain amino acid ABC transporter permease complement(4055632..4056516) Burkholderia pseudomallei K96243 3093113 YP_110009.1 CDS BPSL3416 NC_006350.1 4056656 4057852 R Similar to Ralstonia solanacearum substrate-binding periplasmic rsc3342 or rs02578 SWALL:Q8XU51 (EMBL:AL646074) (402 aa) fasta scores: E(): 8.7e-112, 72.56% id in 401 aa, and to Azoarcus evansii substrate binding protein SWALL:Q93FB9 (EMBL:AF320253) (391 aa) fasta scores: E(): 1.8e-19, 28.69% id in 359 aa; branched-chain amino acid ABC transporter periplasmic substrate binding protein complement(4056656..4057852) Burkholderia pseudomallei K96243 3093118 YP_110010.1 CDS BPSL3417 NC_006350.1 4057920 4058675 R Similar to Rhizobium meliloti ATP-binding ABC transporter protein R02974 or Smc03119 SWALL:Q92LQ6 (EMBL:AL591792) (233 aa) fasta scores: E(): 1.4e-49, 60.94% id in 233 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or Pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 9.6e-26, 42.35% id in 229 aa; branched-chain amino acid ABC transporter ATP-binding subunit complement(4057920..4058675) Burkholderia pseudomallei K96243 3093119 YP_110011.1 CDS BPSL3418 NC_006350.1 4058672 4059451 R Similar to Ralstonia solanacearum probable amino acid ATP-binding ABC transporter protein Rsc2438 or Rs02664 SWALL:Q8XWN5 (EMBL:AL646070) (257 aa) fasta scores: E(): 1e-25, 37.3% id in 252 aa, and to Salmonella typhimurium high-affinity branched-chain amino acid transport ATP-binding protein LivG or stm3561 or Sty4251 SWALL:LIVG_SALTY (SWALL:P30293) (255 aa) fasta scores: E(): 1.9e-24, 39.23% id in 260 aa; branched-chain amino acid ABC transporter ATP-binding subunit complement(4058672..4059451) Burkholderia pseudomallei K96243 3094089 YP_110012.1 CDS BPSL3419 NC_006350.1 4059951 4061636 R Similar to Ralstonia solanacearum choline dehydrogenase lipoprotein oxidoreductase beta or Rsc3345 or Rs02583 SWALL:Q8XU48 (EMBL:AL646074) (544 aa) fasta scores: E(): 1e-158, 72.81% id in 548 aa, and to Escherichia coli choline dehydrogenase beta or b0311 SWALL:BETA_ECOLI (SWALL:P17444) (556 aa) fasta scores: E(): 1.9e-69, 39.59% id in 538 aa; GMC oxidoreductase complement(4059951..4061636) Burkholderia pseudomallei K96243 3094090 YP_110013.1 CDS msdA NC_006350.1 4061811 4063337 R Similar to Streptomyces coelicolor methylmalonic acid semialdehyde dehydrogenase MsdA SWALL:Q53935 (EMBL:L48550) (500 aa) fasta scores: E(): 5.7e-112, 60.28% id in 491 aa; methylmalonic acid semialdehyde dehydrogenase complement(4061811..4063337) Burkholderia pseudomallei K96243 3091856 YP_110014.1 CDS BPSL3421 NC_006350.1 4063478 4064377 D Similar to Ralstonia solanacearum probable transcription regulator protein Rsp1450 or Rs03093 SWALL:Q8XQ36 (EMBL:AL646084) (297 aa) fasta scores: E(): 1.6e-35, 41.75% id in 297 aa, and to Escherichia coli xanthosine operon regulatory protein XapR or PndR or b2405 SWALL:XAPR_ECOLI (SWALL:P23841) (294 aa) fasta scores: E(): 1e-16, 29.69% id in 293 aa; LysR family transcriptional regulator 4063478..4064377 Burkholderia pseudomallei K96243 3094692 YP_110015.1 CDS BPSL3422 NC_006350.1 4064769 4065299 D Similar to Ralstonia solanacearum hypothetical protein Rsc1389 or Rs04672 SWALL:Q8XZK6 (EMBL:AL646064) (172 aa) fasta scores: E(): 3.3e-24, 48.23% id in 170 aa; adenylate cyclase 4064769..4065299 Burkholderia pseudomallei K96243 3094693 YP_110016.1 CDS BPSL3423 NC_006350.1 4065400 4065951 R Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3965 SWALL:Q9HX51 (EMBL:AE004814) (169 aa) fasta scores: E(): 5.8e-18, 41.5% id in 159 aa, and to Klebsiella pneumoniae leucine-responsive regulatory protein Lrp SWALL:LRP_KLEPN (SWALL:P37424) (163 aa) fasta scores: E(): 1.8e-15, 35.57% id in 149 aa; AsnC family transcriptional regulator complement(4065400..4065951) Burkholderia pseudomallei K96243 3092624 YP_110017.1 CDS phhA NC_006350.1 4066035 4066928 D phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 4066035..4066928 Burkholderia pseudomallei K96243 3091566 YP_110018.1 CDS phhB NC_006350.1 4067012 4067317 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 4067012..4067317 Burkholderia pseudomallei K96243 3092625 YP_110019.1 CDS BPSL3426 NC_006350.1 4067752 4068444 D Similar to Rhizobium loti two-component response regulator Mll7953 SWALL:Q984L3 (EMBL:AP003013) (223 aa) fasta scores: E(): 3.7e-35, 50.66% id in 227 aa, and to Salmonella typhimurium transcriptional regulatory protein TctD or Stm2785 SWALL:TCTD_SALTY (SWALL:P22104) (224 aa) fasta scores: E(): 1.1e-29, 42.34% id in 222 aa; two-component response regulator 4067752..4068444 Burkholderia pseudomallei K96243 3093752 YP_110020.1 CDS BPSL3427 NC_006350.1 4068551 4070035 D Similar to Xanthomonas axonopodis two-component system sensor protein TctC or xac3482 SWALL:AAM38325 (EMBL:AE011996) (461 aa) fasta scores: E(): 3.6e-26, 32.27% id in 474 aa, and to Escherichia coli O157:H7 sensor protein QseC or z4378 or ecs3908/ecs3909 SWALL:QSEC_ECO57 (SWALL:Q8X524) (449 aa) fasta scores: E(): 4e-18, 29.95% id in 464 aa; two-component sensor kinase 4068551..4070035 Burkholderia pseudomallei K96243 3093753 YP_110021.1 CDS BPSL3428 NC_006350.1 4070477 4070989 R Similar to Ralstonia solanacearum hypothetical protein Rsc3358 or Rs02633 SWALL:Q8XU36 (EMBL:AL646074) (179 aa) fasta scores: E(): 1.9e-43, 70.19% id in 151 aa; hypothetical protein complement(4070477..4070989) Burkholderia pseudomallei K96243 3091595 YP_110022.1 CDS BPSL3429 NC_006350.1 4071299 4072411 R Similar to ful length Ralstonia solanacearum NADH-dependent flavin oxidoreductase Rsc0702 or Rs01607 SWALL:Q8Y1I8 (EMBL:AL646060) (370 aa) fasta scores: E(): 1e-93, 63.78% id in 370 aa, and to C-terminal portion of Azoarcus evansii 2-amninobenzoyl-CoA monooxygenase/reductase SWALL:Q93FB8 (EMBL:AF320254) (773 aa) fasta scores: E(): 6.5e-55, 44.38% id in 356 aa; NADH-dependent flavin oxidoreductase complement(4071299..4072411) Burkholderia pseudomallei K96243 3091596 YP_110023.1 CDS BPSL3430 NC_006350.1 4072638 4073348 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(4072638..4073348) Burkholderia pseudomallei K96243 3091795 YP_110024.1 CDS BPSL3431 NC_006350.1 4073388 4074029 R Similar to many predicted regulators eg. Pseudomonas aeruginosa probable transcriptional regulator pa0942 SWALL:Q9I516 (EMBL:AE004528) (186 aa) fasta scores: E(): 9.7e-08, 31.86% id in 182 aa; MarR family transcriptional regulator complement(4073388..4074029) Burkholderia pseudomallei K96243 3091796 YP_110025.1 CDS BPSS0001 NC_006351.1 1 1188 D hypothetical protein 1..1188 Burkholderia pseudomallei K96243 3095690 YP_110026.1 CDS BPSS0002 NC_006351.1 1282 2325 R Similar to Ralstonia solanacearum probable integrase/recombinase rsp1102 or rs02608 SWALL:Q8XQW6 (EMBL:AL646082) (323 aa) fasta scores: E(): 4.8e-34, 37.89% id in 314 aa, and to parts of Rhizobium loti integrase/recombinase mll6042 and mll5956 SWALL:Q981F2 (EMBL:AP003008) (332 aa) fasta scores: E(): 3e-06, 29.65% id in 172 aa; integrase complement(1282..2325) Burkholderia pseudomallei K96243 3095691 YP_110027.1 CDS BPSS0003 NC_006351.1 2471 2917 R hypothetical protein complement(2471..2917) Burkholderia pseudomallei K96243 3095307 YP_110028.1 CDS BPSS0004 NC_006351.1 2946 3554 R Similar to Ralstonia solanacearum transcription regulator protein rsp0962 or rs02293 SWALL:Q8XR97 (EMBL:AL646082) (182 aa) fasta scores: E(): 3.2e-31, 53.33% id in 180 aa, and to Streptomyces coelicolor transcriptional regulatory protein sco1312 or scbac36f5.23C SWALL:Q93IV8 (EMBL:AL592292) (201 aa) fasta scores: E(): 2.2e-11, 30.11% id in 176 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; DNA-binding protein complement(2946..3554) Burkholderia pseudomallei K96243 3094949 YP_110029.1 CDS kbl NC_006351.1 3722 4921 D catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 3722..4921 Burkholderia pseudomallei K96243 3095061 YP_110030.1 CDS tdh NC_006351.1 4934 5965 D converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 4934..5965 Burkholderia pseudomallei K96243 3096816 YP_110031.1 CDS BPSS0007 NC_006351.1 6300 6953 R Similar to Caulobacter crescentus hypothetical protein cc3392 SWALL:Q9A314 (EMBL:AE005999) (213 aa) fasta scores: E(): 9.6e-20, 36.76% id in 204 aa, and to Xylella fastidiosa hypothetical protein xf1840 SWALL:Q9PCE1 (EMBL:AE004005) (237 aa) fasta scores: E(): 3e-19, 33.99% id in 203 aa; hypothetical protein complement(6300..6953) Burkholderia pseudomallei K96243 3094950 YP_110032.1 CDS BPSS0008 NC_006351.1 7043 7660 D Similar to Anabaena sp. transcriptional regulator all7523 SWALL:Q8ZSI7 (EMBL:AP003602) (190 aa) fasta scores: E(): 1.8e-19, 35.26% id in 190 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3034 SWALL:Q9HZH4 (EMBL:AE004728) (185 aa) fasta scores: E(): 5.7e-19, 41.53% id in 183 aa; TetR family transcriptional regulator 7043..7660 Burkholderia pseudomallei K96243 3097084 YP_110033.1 CDS BPSS0009 NC_006351.1 7761 8240 D Similar to Agrobacterium tumefaciens hypothetical protein atu5387 or agr_pat_559 SWALL:Q8UJT8 (EMBL:AE008960) (154 aa) fasta scores: E(): 9.4e-52, 76.31% id in 152 aa, and to Pseudomonas aeruginosa hypothetical protein pa5395 SWALL:Q9HTG9 (EMBL:AE004952) (156 aa) fasta scores: E(): 6.3e-51, 74.19% id in 155 aa; hypothetical protein 7761..8240 Burkholderia pseudomallei K96243 3095092 YP_110034.1 CDS BPSS0010 NC_006351.1 8455 9471 R hypothetical protein complement(8455..9471) Burkholderia pseudomallei K96243 3095093 YP_110035.1 CDS BPSS0011 NC_006351.1 9774 10859 R Similar to Escherichia coli probable tartrate dehydrogenase YeaU or b1800 SWALL:TTUC_ECOLI (SWALL:P76251) (361 aa) fasta scores: E(): 2.2e-106, 70.95% id in 358 aa, and to Ralstonia solanacearum probable tartrate dehydrogenase oxidoreductase TtuC or rsp1612 or rs02169 SWALL:Q8XPM6 (EMBL:AL646086) (361 aa) fasta scores: E(): 5.3e-113, 75% id in 360 aa; tartrate dehydrogenase complement(9774..10859) Burkholderia pseudomallei K96243 3096144 YP_110036.1 CDS BPSS0012 NC_006351.1 11028 11945 D Similar to Escherichia coli hypothetical transcriptional regulator YeaT or b1799 SWALL:YEAT_ECOLI (SWALL:P76250) (307 aa) fasta scores: E(): 3.4e-70, 60.13% id in 296 aa, and to Yersinia pestis llysr-family transcriptional regulatory protein ypo2497 SWALL:Q8ZDQ9 (EMBL:AJ414152) (313 aa) fasta scores: E(): 3.7e-67, 56.31% id in 309 aa; LysR family regulatory protein 11028..11945 Burkholderia pseudomallei K96243 3096145 YP_110037.1 CDS BPSS0013 NC_006351.1 12536 13213 D Similar to Methanosarcina acetivorans hypothetical protein ma2467 SWALL:Q8TN26 (EMBL:AE010940) (237 aa) fasta scores: E(): 2.4e-28, 35.37% id in 229 aa, and to Rhizobium loti hypothetical protein mll0909 SWALL:Q98LR8 (EMBL:AP002996) (244 aa) fasta scores: E(): 9.6e-21, 31.6% id in 212 aa; hypothetical protein 12536..13213 Burkholderia pseudomallei K96243 3095048 YP_110038.1 CDS BPSS0014 NC_006351.1 13448 14071 D Similar to Escherichia coli, and Escherichia coli O6 hypothetical GST-like protein YliJ or b0838 or c0923 SWALL:YLIJ_ECOLI (SWALL:P75805) (208 aa) fasta scores: E(): 8.4e-22, 38.38% id in 198 aa, and to Xanthomonas axonopodis glutathione S-transferase xac4352 SWALL:AAM39182 (EMBL:AE012089) (206 aa) fasta scores: E(): 4.8e-42, 57.07% id in 198 aa; glutathione S-transferase like protein 13448..14071 Burkholderia pseudomallei K96243 3096935 YP_110039.1 CDS BPSS0015 NC_006351.1 14506 14970 R hypothetical protein complement(14506..14970) Burkholderia pseudomallei K96243 3096936 YP_110040.1 CDS BPSS0016 NC_006351.1 15050 16222 R Similar to Ralstonia solanacearum transmembrane protein rsp1060 or rs02397 SWALL:Q8XR08 (EMBL:AL646082) (377 aa) fasta scores: E(): 2.7e-87, 62.29% id in 366 aa, and to Rhizobium loti hypothetical protein mlr2398 SWALL:Q98IH7 (EMBL:AP002999) (390 aa) fasta scores: E(): 3.1e-65, 49.2% id in 378 aa; phospholipase complement(15050..16222) Burkholderia pseudomallei K96243 3096001 YP_110041.1 CDS BPSS0017 NC_006351.1 16285 17070 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(16285..17070) Burkholderia pseudomallei K96243 3097141 YP_110042.1 CDS adc NC_006351.1 17117 17857 R converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase complement(17117..17857) Burkholderia pseudomallei K96243 3096265 YP_110043.1 CDS BPSS0019 NC_006351.1 18316 18912 D Similar to Escherichia coli hypothetical protein YbjG or b0841 SWALL:YBJG_ECOLI (SWALL:P75806) (198 aa) fasta scores: E(): 2.2e-18, 35.71% id in 196 aa, and to Ralstonia solanacearum transport transmembrane protein rsc3142 or rs00461 SWALL:Q8XUP4 (EMBL:AL646073) (199 aa) fasta scores: E(): 2.3e-20, 38.29% id in 188 aa; transport-related membrane protein 18316..18912 Burkholderia pseudomallei K96243 3097142 YP_110044.1 CDS BPSS0020 NC_006351.1 18935 19228 R hypothetical protein complement(18935..19228) Burkholderia pseudomallei K96243 3097005 YP_110045.1 CDS BPSS0021 NC_006351.1 19937 20764 R Similar to Stigmatella aurantiaca iron utilization protein MxcB SWALL:Q9F641 (EMBL:AF299336) (270 aa) fasta scores: E(): 1.4e-50, 50.18% id in 271 aa, and to Vibrio cholerae vibriobactin utilization protein ViuB or vc2210 SWALL:VIUB_VIBCH (SWALL:Q56646) (271 aa) fasta scores: E(): 5.4e-20, 33.85% id in 257 aa; iron transport/utilisation-like protein complement(19937..20764) Burkholderia pseudomallei K96243 3095971 YP_110046.1 CDS BPSS0022 NC_006351.1 20804 21508 R Similar to Ralstonia solanacearum hypothetical protein rsp0258 or rs03708 SWALL:Q8XT57 (EMBL:AL646077) (218 aa) fasta scores: E(): 1.8e-24, 46.39% id in 222 aa; PadR-like family regulatory protein complement(20804..21508) Burkholderia pseudomallei K96243 3095972 YP_110047.1 CDS BPSS0023 NC_006351.1 21911 23317 D Similar to Polyangium cellulosum cytochrome-P450-monooxygenase SpiL SWALL:CAD43453 (EMBL:AJ505006) (456 aa) fasta scores: E(): 1.1e-16, 25.6% id in 457 aa, and to Mycobacterium tuberculosis cytochrome P450 137 Cyp137 or rv3685c or mt3787 or mtv025.033C SWALL:C137_MYCTU (SWALL:O69653) (476 aa) fasta scores: E(): 1.8e-16, 25.27% id in 451 aa; cytochrome monooxygenase-like protein 21911..23317 Burkholderia pseudomallei K96243 3096410 YP_110048.1 CDS BPSS0024 NC_006351.1 23467 23667 D hypothetical protein 23467..23667 Burkholderia pseudomallei K96243 3097099 YP_110049.1 CDS BPSS0025 NC_006351.1 23841 24692 D Weakly similar to Pseudomonas aeruginosa hypothetical protein pa3283 SWALL:Q9HYW0 (EMBL:AE004750) (284 aa) fasta scores: E(): 4.9e-12, 33.33% id in 258 aa, and to Rhizobium meliloti hypothetical protein rb0508 or smb20529 SWALL:Q92W37 (EMBL:AL603643) (309 aa) fasta scores: E(): 5.6e-08, 24.68% id in 239 aa; hypothetical protein 23841..24692 Burkholderia pseudomallei K96243 3097100 YP_110050.1 CDS BPSS0026 NC_006351.1 24689 25522 D hypothetical protein 24689..25522 Burkholderia pseudomallei K96243 3097114 YP_110051.1 CDS BPSS0027 NC_006351.1 25519 27462 D N-terminus is similar to the N-terminal region of Pyrococcus horikoshii hypothetical methyltransferase ph0819 SWALL:Y819_PYRHO (SWALL:O58549) (459 aa) fasta scores: E(): 3.2e-28, 30.07% id in 399 aa, and to the full length Methanopyrus kandleri predicted Fe-S oxidoreductase mk0992 SWALL:Q8TWP0 (EMBL:AE010388) (483 aa) fasta scores: E(): 2.5e-25, 26.53% id in 505 aa; hypothetical protein 25519..27462 Burkholderia pseudomallei K96243 3096917 YP_110052.1 CDS BPSS0028 NC_006351.1 27476 28465 D Low similarity to Streptomyces lincolnensis LmbW protein SWALL:Q54376 (EMBL:X79146) (318 aa) fasta scores: E(): 7.2e-08, 25.91% id in 328 aa; hypothetical protein 27476..28465 Burkholderia pseudomallei K96243 3096918 YP_110053.1 CDS BPSS0029 NC_006351.1 28637 29257 R Similar to Brucella melitensis transporter LysE family bmei1274 SWALL:Q8YG87 (EMBL:AE009566) (204 aa) fasta scores: E(): 1.5e-30, 49.74% id in 197 aa, and to Ralstonia solanacearum probable transmembrane protein rsc0385 or rs03353 SWALL:Q8Y2F1 (EMBL:AL646059) (212 aa) fasta scores: E(): 7.8e-28, 47.71% id in 197 aa; transport-related membrane protein complement(28637..29257) Burkholderia pseudomallei K96243 3097043 YP_110054.1 CDS BPSS0030 NC_006351.1 29365 30258 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 29365..30258 Burkholderia pseudomallei K96243 3097061 YP_110055.1 CDS BPSS0031 NC_006351.1 30314 31069 R Similar to Neisseria meningitidis anaerobic transcriptional regulatory protein nma2107 or nmb0380 SWALL:Q9JQQ8 (EMBL:AL162758) (244 aa) fasta scores: E(): 3.8e-40, 45.1% id in 235 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 fumarate and nitrate reduction regulatory protein Fnr or NirR or b1334 or c1807 or z2433 or ecs1915 SWALL:FNR_ECOLI (SWALL:P03019) (250 aa) fasta scores: E(): 1.9e-35, 42.47% id in 226 aa; anaerobic growth regulatory protein complement(30314..31069) Burkholderia pseudomallei K96243 3097062 YP_110056.1 CDS BPSS0032 NC_006351.1 31219 31686 R Similar to Ralstonia solanacearum hypothetical protein rsc0179 or rs00610 SWALL:Q8Y302 (EMBL:AL646057) (151 aa) fasta scores: E(): 6.2e-16, 40.69% id in 145 aa, and to Methanosarcina acetivorans universal stress protein ma3284 SWALL:Q8TKW0 (EMBL:AE011032) (152 aa) fasta scores: E(): 7.3e-11, 37.16% id in 148 aa; universal stress-related protein complement(31219..31686) Burkholderia pseudomallei K96243 3097166 YP_110057.1 CDS BPSS0033 NC_006351.1 32074 32340 D hypothetical protein 32074..32340 Burkholderia pseudomallei K96243 3097030 YP_110058.1 CDS BPSS0034 NC_006351.1 33115 34695 D Similar to Xanthomonas campestris ketoglutarate semialdehyde dehydrogenase xcc3244 SWALL:AAM42514 (EMBL:AE012441) (526 aa) fasta scores: E(): 4e-114, 62.14% id in 523 aa, and to Vibrio harveyi fatty aldehyde dehydrogenase AldH SWALL:DHAF_VIBHA (SWALL:Q56694) (510 aa) fasta scores: E(): 6.1e-82, 48.58% id in 494 aa. Note: Also similar to BPSS0329 (531 aa) fasta scores: E(): 7.2e-91, 60.803% identity in 523 aa overlap; fatty aldehyde dehydrogenase 33115..34695 Burkholderia pseudomallei K96243 3097031 YP_110059.1 CDS BPSS0035 NC_006351.1 34692 35642 D Similar to Zymomonas mobilis gluconolactonase precursor Gnl SWALL:GNL_ZYMMO (SWALL:Q01578) (320 aa) fasta scores: E(): 1.4e-14, 33.45% id in 278 aa, and to Ralstonia solanacearum gluconolactonase precursor rsp0824 or rs05371 SWALL:Q8XRK7 (EMBL:AL646081) (353 aa) fasta scores: E(): 2.8e-69, 59.2% id in 326 aa; gluconolactonase 34692..35642 Burkholderia pseudomallei K96243 3097174 YP_110060.1 CDS BPSS0036 NC_006351.1 36388 36804 R hypothetical protein complement(36388..36804) Burkholderia pseudomallei K96243 3095159 YP_110061.1 CDS BPSS0037 NC_006351.1 37059 37307 D hypothetical protein 37059..37307 Burkholderia pseudomallei K96243 3095160 YP_110062.1 CDS BPSS0038 NC_006351.1 37431 38354 D Similar to the plasmid borne Synechococcus sp. serine acetyltransferase, plasmid SrpH SWALL:SRPH_SYNP7 (SWALL:Q59967) (319 aa) fasta scores: E(): 1.3e-62, 59.19% id in 299 aa, and to Pseudomonas putida serine O-acetyltransferase, pp0228 SWALL:AAN65860 (EMBL:AE016774) (174 aa) fasta scores: E(): 9.3e-46, 74.26% id in 171 aa; serine acetyltransferase 37431..38354 Burkholderia pseudomallei K96243 3097016 YP_110063.1 CDS BPSS0039 NC_006351.1 38606 39409 R Similar to Synechocystis sp. 3-oxoacyl-[acyl-carrier protein] reductase 1 slr0886 SWALL:FAG1_SYNY3 (SWALL:P73574) (247 aa) fasta scores: E(): 2.5e-17, 37.55% id in 245 aa, and to Ralstonia solanacearum oxidoreductase rsc0156 or rs01026 SWALL:Q8Y325 (EMBL:AL646057) (267 aa) fasta scores: E(): 5.9e-28, 41.66% id in 264 aa; dehydrogenase complement(38606..39409) Burkholderia pseudomallei K96243 3096399 YP_110064.1 CDS folE NC_006351.1 39410 39964 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(39410..39964) Burkholderia pseudomallei K96243 3095266 YP_110065.1 CDS BPSS0041 NC_006351.1 40276 41202 R Similar to the plasmid borne Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 4.8e-43, 42.28% id in 298 aa, and to Rhizobium tropici nodulation protein D1 NodD1 SWALL:NOD1_RHITR (SWALL:Q02876) (308 aa) fasta scores: E(): 1.3e-26, 35.01% id in 297 aa; LysR family transcriptional regulator complement(40276..41202) Burkholderia pseudomallei K96243 3096400 YP_110066.1 CDS pobA NC_006351.1 41316 42539 D catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 41316..42539 Burkholderia pseudomallei K96243 3095552 YP_110067.1 CDS pcaI NC_006351.1 42747 43460 D Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit A PcaI SWALL:PCAI_PSEPU (SWALL:Q01103) (231 aa) fasta scores: E(): 3.5e-63, 75.33% id in 223 aa, and to Ralstonia solanacearum probable 3-oxoadipate coa-transferase subunit A protein rsc2254 or rs01305 SWALL:Q8XX62 (EMBL:AL646069) (229 aa) fasta scores: E(): 2.6e-67, 80.34% id in 229 aa; 3-oxoadipate CoA-transferase subunit A 42747..43460 Burkholderia pseudomallei K96243 3095334 YP_110068.1 CDS pcaJ NC_006351.1 43479 44135 D Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit B PcaJ SWALL:PCAJ_PSEPU (SWALL:Q01104) (212 aa) fasta scores: E(): 9.6e-62, 76.55% id in 209 aa, and to Ralstonia solanacearum probable 3-oxoadipate coa-transferase subunit B protein rsc2253 or rs01306 SWALL:Q8XX63 (EMBL:AL646069) (220 aa) fasta scores: E(): 2.7e-62, 77.98% id in 209 aa; 3-oxoadipate CoA-transferase subunit B 43479..44135 Burkholderia pseudomallei K96243 3095265 YP_110069.1 CDS pcaB NC_006351.1 44232 45629 D Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase 44232..45629 Burkholderia pseudomallei K96243 3095228 YP_110070.1 CDS BPSS0046 NC_006351.1 45642 46427 D Similar to Alcaligenes eutrophus 3-oxoadipate enol-lactone hydrolase CatD1 SWALL:Q9EV40 (EMBL:AF042281) (260 aa) fasta scores: E(): 3.8e-44, 47.69% id in 260 aa, and to Ralstonia solanacearum probable b-ketoadipate enol-lactone hydrolase transmembrane protein rsc2250 or rs01309 SWALL:Q8XX66 (EMBL:AL646069) (270 aa) fasta scores: E(): 5.3e-44, 45% id in 260 aa; lactone hydrolase 45642..46427 Burkholderia pseudomallei K96243 3097143 YP_110071.1 CDS pcaC NC_006351.1 46443 46829 D Similar to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 8.8e-29, 57.02% id in 121 aa, and to Ralstonia solanacearum 4-carboxymuconolactone decarboxylase rsc2249 or rs01310 SWALL:Q8XX67 (EMBL:AL646069) (131 aa) fasta scores: E(): 9e-38, 76.98% id in 126 aa; 4-carboxymuconolactone decarboxylase 46443..46829 Burkholderia pseudomallei K96243 3095278 YP_110072.1 CDS pcaK NC_006351.1 47008 48363 D Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 1.3e-87, 52.08% id in 432 aa, and to Acinetobacter calcoaceticus 4-hydroxybenzoate transporter PcaK SWALL:PCAK_ACICA (SWALL:Q43975) (457 aa) fasta scores: E(): 8.2e-79, 49.32% id in 442 aa; 4-hydroxybenzoate transporter 47008..48363 Burkholderia pseudomallei K96243 3095372 YP_110073.1 CDS BPSS0049 NC_006351.1 48431 48679 R hypothetical protein complement(48431..48679) Burkholderia pseudomallei K96243 3095340 YP_110074.1 CDS BPSS0050 NC_006351.1 48780 49397 R Similar to Pseudomonas aeruginosa hypothetical protein pa2306 SWALL:Q9I1G9 (EMBL:AE004657) (205 aa) fasta scores: E(): 1.3e-40, 53.26% id in 199 aa, and to Rhizobium meliloti hypothetical transmembrane protein r02108 or smc01425 SWALL:Q92NS0 (EMBL:AL591789) (197 aa) fasta scores: E(): 5.7e-38, 52.76% id in 199 aa; hypothetical protein complement(48780..49397) Burkholderia pseudomallei K96243 3095341 YP_110075.1 CDS BPSS0051 NC_006351.1 49592 50848 R Similar to Rhizobium meliloti transport transmembrane protein r00752 or smc00807 SWALL:Q92RU2 (EMBL:AL591784) (400 aa) fasta scores: E(): 5.7e-69, 56.18% id in 388 aa, and to Thermoplasma acidophilum sugar transporter related protein ta1377 SWALL:Q9HIG2 (EMBL:AL445067) (381 aa) fasta scores: E(): 3.9e-20, 29.24% id in 383 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein complement(49592..50848) Burkholderia pseudomallei K96243 3095418 YP_110076.1 CDS BPSS0052 NC_006351.1 50835 51263 R Similar to the Ralstonia solanacearum hypothetical protein rsp0556 or rs03923 SWALL:Q8XSC2 (EMBL:AL646079) (182 aa) fasta scores: E(): 2.2e-39, 72.66% id in 139 aa, and to the C-terminal region of Bradyrhizobium japonicum superoxide dismutase SodM-like protein SWALL:Q9RH60 (EMBL:AF065159) (276 aa) fasta scores: E(): 3.9e-31, 54.9% id in 153 aa. CDS is truncated at the C-terminus in comparison to both proteins; hypothetical protein complement(50835..51263) Burkholderia pseudomallei K96243 3097155 YP_110077.1 CDS chrA NC_006351.1 51665 52855 R Highly similar to the plasmid borne Alcaligenes eutrophus chromate transport protein ChrA SWALL:CHRA_ALCEU (SWALL:P17551) (401 aa) fasta scores: E(): 5.6e-109, 75.19% id in 387 aa, and to Ralstonia solanacearum probable chromate transport transmembrane protein rsp0555 or rs03924 SWALL:Q8XSC3 (EMBL:AL646079) (401 aa) fasta scores: E(): 4.1e-110, 74.74% id in 396 aa; chromate resistance transport protein complement(51665..52855) Burkholderia pseudomallei K96243 3096659 YP_110078.1 CDS chrB NC_006351.1 52852 53847 R Similar to Alcaligenes eutrophus protein ChrB SWALL:CHRB_ALCEU (SWALL:P17552) (324 aa) fasta scores: E(): 1.2e-64, 54.66% id in 311 aa, and to Ralstonia solanacearum probable chromate resistance signal peptide protein rsp0554 or rs03925 SWALL:Q8XSC4 (EMBL:AL646079) (323 aa) fasta scores: E(): 9.1e-67, 56.01% id in 316 aa; chromate resistance exported protein complement(52852..53847) Burkholderia pseudomallei K96243 3096597 YP_110079.1 CDS BPSS0055 NC_006351.1 54765 55313 D Similar to Rhizobium loti hypothetical protein mll8139 SWALL:Q983W7 (EMBL:AP003013) (174 aa) fasta scores: E(): 1.9e-19, 46.28% id in 175 aa, and to Pseudomonas aeruginosa hypothetical protein pa2134 SWALL:Q9I1Y1 (EMBL:AE004641) (190 aa) fasta scores: E(): 8.6e-09, 34.52% id in 168 aa; hypothetical protein 54765..55313 Burkholderia pseudomallei K96243 3097156 YP_110080.1 CDS BPSS0056 NC_006351.1 55366 55668 D Similar to Rhizobium loti hypothetical protein mlr4661 SWALL:Q98DK6 (EMBL:AP003004) (100 aa) fasta scores: E(): 5.8e-07, 37.89% id in 95 aa, and to Methanosarcina mazei copper-binding protein mm2343 SWALL:AAM32039 (EMBL:AE013477) (103 aa) fasta scores: E(): 7e-07, 35.41% id in 96 aa; hypothetical protein 55366..55668 Burkholderia pseudomallei K96243 3096093 YP_110081.1 CDS BPSS0057 NC_006351.1 55704 56372 D member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 55704..56372 Burkholderia pseudomallei K96243 3095445 YP_110082.1 CDS uvrA NC_006351.1 56852 62767 D N-terminal region similar to Micrococcus luteus excinuclease ABC subunit A uvrA SWALL:UVRA_MICLU (SWALL:P13567) (992 aa) fasta scores: E(): 2.4e-33, 41.63% id in 1052 aa, and C-terminal region similar to Mycobacterium tuberculosis excinuclease ABC subunit A rv1638 or mt1675 or mtcy06h11.02 SWALL:UVRA_MYCTU (SWALL:P94972) (972 aa) fasta scores: E(): 2.8e-31, 41.73% id in 1016 aa. Note: This CDS seems to have duplicated itself forming a whole CDS which N-terminal region is highly similar to its C-terminal region; excinuclease ABC subunit A 56852..62767 Burkholderia pseudomallei K96243 3096641 YP_110083.1 CDS BPSS0059 NC_006351.1 63800 64060 R Similar to Enterobacter aerogenes KluA SWALL:Q93KC6 (EMBL:U67194) (89 aa) fasta scores: E(): 6.5e-12, 53.84% id in 78 aa, and to Pseudomonas sp. hypothetical 10.2 kDa protein orf2 SWALL:Q937D1 (EMBL:U66917) (93 aa) fasta scores: E(): 6.7e-12, 53.84% id in 78 aa, and to Rhizobium meliloti hypothetical protein rb0121 or smb20121 SWALL:Q92X41 (EMBL:AL603642) (91 aa) fasta scores: E(): 6.5e-10, 43.67% id in 87 aa; hypothetical protein complement(63800..64060) Burkholderia pseudomallei K96243 3095446 YP_110084.1 CDS BPSS0060 NC_006351.1 64719 64991 D hypothetical protein 64719..64991 Burkholderia pseudomallei K96243 3096910 YP_110085.1 CDS BPSS0060B NC_006351.1 65274 65573 R Similar to Salmonella typhimurium, and Salmonella typhi DNA-binding protein H-NS Hns SWALL:HNS_SALTY (SWALL:P17428) (136 aa) fasta scores: E(): 3, 29.31% id in 116 aa, and to Ralstonia solanacearum HNS-like transcription regulator protein rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 1.5e-14, 58.16% id in 98 aa; H-NS-like DNA-binding protein complement(65274..65573) Burkholderia pseudomallei K96243 3096500 YP_110086.1 CDS kgtP NC_006351.1 66124 67476 D Similar to Escherichia coli alpha-ketoglutarate permease KgtP or WitA or b2587 SWALL:KGTP_ECOLI (SWALL:P17448) (432 aa) fasta scores: E(): 4.5e-84, 51.63% id in 428 aa, and to Ralstonia solanacearum alpha-ketoglutarate permease transmembrane protein rsp0007 or rs01979 SWALL:Q8XTU7 (EMBL:AL646076) (447 aa) fasta scores: E(): 5.9e-131, 77.87% id in 443 aa. CDS is extended at the N-terminus in comparison to orthologues; alpha-ketoglutarate permease 66124..67476 Burkholderia pseudomallei K96243 3097120 YP_110087.1 CDS BPSS0062 NC_006351.1 67529 69460 D Similar to Ralstonia solanacearum probable C4-dicarboxylate transport sensor kinase transcription regulator protein dctb1 or rsp0008 or rs01980 SWALL:Q8XTU6 (EMBL:AL646076) (634 aa) fasta scores: E(): 4.7e-73, 54.57% id in 634 aa, and to Rhizobium leguminosarum C4-dicarboxylate transport sensor protein DctB SWALL:DCTB_RHILE (SWALL:P10047) (622 aa) fasta scores: E(): 2.3e-24, 31.02% id in 635 aa; C4-dicarboxylate transport sensor kinase 67529..69460 Burkholderia pseudomallei K96243 3096501 YP_110088.1 CDS dctD NC_006351.1 69444 70790 D Similar to Rhizobium meliloti C4-dicarboxylate transport transcriptional regulatory protein DctD or rb1525 or smb20613 SWALL:DCTD_RHIME (SWALL:P13632) (460 aa) fasta scores: E(): 7.2e-75, 51.82% id in 438 aa, and to Escherichia coli, and Escherichia coli O157:H7 nitrogen regulation protein Nr GlnG or NtrC or GlnT or b3868 or z5404 or ecs4790 SWALL:NTRC_ECOLI (SWALL:P06713) (469 aa) fasta scores: E(): 9.6e-53, 41.1% id in 472 aa; C4-dicarboxylate transport transcriptional response regulator 69444..70790 Burkholderia pseudomallei K96243 3096711 YP_110089.1 CDS BPSS0064 NC_006351.1 72252 72812 R No significant database matches. Possible alternative translational start sites; hypothetical protein complement(72252..72812) Burkholderia pseudomallei K96243 3096950 YP_110090.1 CDS BPSS0065 NC_006351.1 73093 75045 D Weak similarity to the C-terminal region of Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 3.5e-14, 30.93% id in 682 aa; hypothetical protein 73093..75045 Burkholderia pseudomallei K96243 3096942 YP_110091.1 CDS BPSS0066 NC_006351.1 75296 75802 D Similar to the C-terminal region of Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 2.1e-10, 35.13% id in 148 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 4.4e-10, 36.55% id in 145 aa. Possible gene remnant; AraC family transcriptional regulator 75296..75802 Burkholderia pseudomallei K96243 3096943 YP_110092.1 CDS BPSS0067 NC_006351.1 76174 78369 D Similar to Pseudomonas aeruginosa non-hemolytic phospholipase C precursor PlcN or pa3319 SWALL:PHLN_PSEAE (SWALL:P15713) (692 aa) fasta scores: E(): 6e-54, 53.29% id in 728 aa, and to Burkholderia pseudomallei non-hemolytic phospholipase C precursor PlcN SWALL:PHLN_BURPS (SWALL:Q9RGS8) (700 aa) fasta scores: E(): 4e-39, 45.43% id in 744 aa; phospholipase C precursor 76174..78369 Burkholderia pseudomallei K96243 3096819 YP_110093.1 CDS BPSS0068 NC_006351.1 78867 79601 D hypothetical protein 78867..79601 Burkholderia pseudomallei K96243 3095398 YP_110094.1 CDS BPSS0070 NC_006351.1 80077 81324 D Similar to Escherichia coli transposase InsI for insertion sequence element IB30B/C/D (InsI1 or b0256) and (InsI2 or b1404) and (InsI3 or b4284) SWALL:INSI_ECOLI (SWALL:P37246) (383 aa) fasta scores: E(): 8.3e-21, 39.17% id in 388 aa, and to Alcaligenes eutrophus transposase for insertion sequence element IS1086 SWALL:TRA8_ALCEU (SWALL:P37248) (339 aa) fasta scores: E(): 3.8e-19, 42.2% id in 372 aa; transposase 80077..81324 Burkholderia pseudomallei K96243 3095298 YP_110095.1 CDS BPSS0073 NC_006351.1 82938 83957 R Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 4.4e-20, 27.92% id in 333 aa and to Pseudomonas aeruginosa probable transcriptional regulator pa2704 SWALL:Q9I0D8 (EMBL:AE004698) (339 aa) fasta scores: E(): 3.1e-28, 32.39% id in 321 aa; regulatory protein complement(82938..83957) Burkholderia pseudomallei K96243 3096894 YP_110096.1 CDS BPSS0074 NC_006351.1 84049 84411 D hypothetical protein 84049..84411 Burkholderia pseudomallei K96243 3094937 YP_110097.1 CDS BPSS0075 NC_006351.1 84913 85833 D Similar to Escherichia coli spermidine/putrescine transport system permease PotB or b1125 SWALL:POTB_ECOLI (SWALL:P23860) (275 aa) fasta scores: E(): 7.8e-29, 34.69% id in 245 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0325 SWALL:Q9I6G6 (EMBL:AE004470) (309 aa) fasta scores: E(): 3.4e-49, 49.08% id in 273 aa; ABC transporter membrane protein 84913..85833 Burkholderia pseudomallei K96243 3096148 YP_110098.1 CDS BPSS0076 NC_006351.1 85817 86671 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 spermidine/putrescine transport system permease PotC or b1124 or c1399 or z1763 or ecs1500 SWALL:POTC_ECOLI (SWALL:P23859) (264 aa) fasta scores: E(): 8.6e-29, 33.84% id in 260 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0324 SWALL:Q9I6G7 (EMBL:AE004470) (262 aa) fasta scores: E(): 2.9e-42, 47.52% id in 263 aa; ABC transporter membrane protein 85817..86671 Burkholderia pseudomallei K96243 3096149 YP_110099.1 CDS BPSS0077 NC_006351.1 86668 87699 D Similar to Escherichia coli spermidine/putrescine-binding periplasmic protein precursor PotD or b1123 SWALL:POTD_ECOLI (SWALL:P23861) (348 aa) fasta scores: E(): 2.3e-25, 26.23% id in 343 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa0323 SWALL:Q9I6G8 (EMBL:AE004470) (347 aa) fasta scores: E(): 9.7e-69, 48.19% id in 332 aa; ABC transport system, exported substrate-binding protein 86668..87699 Burkholderia pseudomallei K96243 3096530 YP_110100.1 CDS BPSS0077A NC_006351.1 88287 88592 D Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 1.5e-10, 43.29% id in 97 aa, and to Bordetella pertussis Bph3 SWALL:O07507 (EMBL:U82566) (123 aa) fasta scores: E(): 0.00073, 32.72% id in 110 aa; HNS-like regulatory protein 88287..88592 Burkholderia pseudomallei K96243 3096878 YP_110101.1 CDS BPSS0078 NC_006351.1 88921 91692 D Similar to Ralstonia solanacearum VGR-related protein rsp0518 or rs06151 SWALL:Q8XSF8 (EMBL:AL646079) (908 aa) fasta scores: E(): 1.1e-90, 41.55% id in 900 aa, and to Escherichia coli VgrE protein SWALL:O52660 (EMBL:AF044499) (702 aa) fasta scores: E(): 0.00017, 25% id in 532 aa; hypothetical protein 88921..91692 Burkholderia pseudomallei K96243 3096879 YP_110102.1 CDS BPSS0079 NC_006351.1 91706 93946 D Similar to Pseudomonas aeruginosa hypothetical protein pa0260 SWALL:Q9I6M9 (EMBL:AE004464) (716 aa) fasta scores: E(): 1.5e-24, 31.81% id in 770 aa; hypothetical protein 91706..93946 Burkholderia pseudomallei K96243 3096725 YP_110103.1 CDS BPSS0080 NC_006351.1 94259 95614 D Similar to parts of Pseudomonas aeruginosa hypothetical protein pa0259 SWALL:Q9I6N0 (EMBL:AE004464) (480 aa) fasta scores: E(): 2.3e-15, 27.19% id in 478 aa; hypothetical protein 94259..95614 Burkholderia pseudomallei K96243 3096780 YP_110104.1 CDS BPSS0080a NC_006351.1 95624 95887 D Similar to Ralstonia solanacearum hypothetical protein RSC3217 or RS02434 SWALL:Q8XUH1 (EMBL:AL646074) (90 aa) fasta scores: E(): 3e-20, 62.79% id in 86 aa, and to the N-terminal region of Burkholderia thailandensis bacteriophage protein GP29 SWALL:Q8VP97 (EMBL:AY063741) (186 aa) fasta scores: E(): 5e-07, 42.35% id in 85 aa; hypothetical protein 95624..95887 Burkholderia pseudomallei K96243 3096781 YP_110105.1 CDS BPSS0081 NC_006351.1 96302 96721 R Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YjbQ or b4056 or z5655 or ecs5038 SWALL:YJBQ_ECOLI (SWALL:P32698) (138 aa) fasta scores: E(): 1.2e-18, 42.85% id in 133 aa, and to Rhizobium meliloti hypothetical protein r02310 or smc01559 SWALL:Q92NA3 (EMBL:AL591790) (140 aa) fasta scores: E(): 6.2e-28, 56.42% id in 140 aa; hypothetical protein complement(96302..96721) Burkholderia pseudomallei K96243 3096886 YP_110106.1 CDS BPSS0082 NC_006351.1 96741 97067 R Similar to Xanthomonas axonopodis thioredoxin TrxA or xac0109 SWALL:AAM35001 (EMBL:AE011634) (109 aa) fasta scores: E(): 2.1e-17, 50% id in 96 aa, and to Pseudomonas aeruginosa probable thioredoxin pa2694 SWALL:Q9I0E8 (EMBL:AE004697) (108 aa) fasta scores: E(): 1.1e-22, 60.78% id in 102 aa; thioredoxin complement(96741..97067) Burkholderia pseudomallei K96243 3096747 YP_110107.1 CDS BPSS0083 NC_006351.1 97539 98231 D hypothetical protein 97539..98231 Burkholderia pseudomallei K96243 3096748 YP_110108.1 CDS BPSS0085 NC_006351.1 98817 99440 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0361 or rs03329 SWALL:Q8Y2H5 (EMBL:AL646058) (171 aa) fasta scores: E(): 2e-11, 33.96% id in 159 aa. Weakly similar to Bordetella parapertussis membrane protein bpp4203 SWALL:Q7W345 (EMBL:BX640436) (181 aa) fasta scores: E(): 0.00057, 27.16% id in 162 aa. CDS is extended at the C- and N-termini in comparison to the R. solanacearum protein. The presence of a gene remnant overlapping the C-terminus of the CDS (BPSS0084) suggest that this may be a partial gene; hypothetical protein complement(98817..99440) Burkholderia pseudomallei K96243 3094975 YP_110109.1 CDS BPSS0086 NC_006351.1 99533 101128 R Similar to Bradyrhizobium japonicum cytochrome C oxidase polypeptide I CtaD or CoxA SWALL:COX1_BRAJA (SWALL:P31833) (541 aa) fasta scores: E(): 3.4e-116, 54.49% id in 534 aa, and to Rhizobium leguminosarum cytochrome C oxidase polypeptide I CtaD or CoxA SWALL:COX1_RHILE (SWALL:Q08855) (538 aa) fasta scores: E(): 5.8e-116, 56.18% id in 534 aa; cytochrome C oxidase-related protein complement(99533..101128) Burkholderia pseudomallei K96243 3094976 YP_110110.1 CDS BPSS0087 NC_006351.1 102280 103737 R hypothetical protein complement(102280..103737) Burkholderia pseudomallei K96243 3096831 YP_110111.1 CDS BPSS0088 NC_006351.1 105290 107227 D No significant database matches to the full length CDS. Similar to parts of Xanthomonas axonopodis outer membrane protein XadA or xac3546 SWALL:AAM38389 (EMBL:AE012003) (2190 aa) fasta scores: E(): 1.5e-48, 41.17% id in 629 aa; hypothetical protein 105290..107227 Burkholderia pseudomallei K96243 3095776 YP_110112.1 CDS BPSS0089 NC_006351.1 107294 108781 R Similar to Ralstonia solanacearum transmembrane protein rsp0161 or rs05517 SWALL:Q8XTF1 (EMBL:AL646076) (517 aa) fasta scores: E(): 3.2e-115, 57.32% id in 485 aa, and to Xanthomonas axonopodis hypothetical protein xac3119 SWALL:AAM37964 (EMBL:AE011956) (504 aa) fasta scores: E(): 2.5e-104, 53.07% id in 471 aa; hypothetical protein complement(107294..108781) Burkholderia pseudomallei K96243 3095777 YP_110113.1 CDS BPSS0090 NC_006351.1 109043 109597 R Low similarity to Yersinia pestis exported protein ypo1208 SWALL:Q8ZGS3 (EMBL:AJ414147) (175 aa) fasta scores: E(): 3.4e-08, 27.71% id in 166 aa, and to Salmonella typhimurium inner membrane protein YfaZ or stm2294 SWALL:Q8ZNF6 (EMBL:AE008803) (215 aa) fasta scores: E(): 8.4e-07, 29.56% id in 159 aa; hypothetical protein complement(109043..109597) Burkholderia pseudomallei K96243 3095759 YP_110114.1 CDS BPSS0091 NC_006351.1 110182 110727 D Similar to Escherichia coli f17 fimbrial protein precursor f17a-A SWALL:FMF3_ECOLI (SWALL:P11312) (180 aa) fasta scores: E(): 1.1e-12, 35% id in 180 aa, and to Yersinia pestis frimbrial protein ypo2945 SWALL:Q8ZCN6 (EMBL:AJ414154) (181 aa) fasta scores: E(): 4.5e-15, 37.83% id in 185 aa; fimbrial protein 110182..110727 Burkholderia pseudomallei K96243 3096870 YP_110115.1 CDS BPSS0092 NC_006351.1 110792 111529 D Similar to Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 3.4e-36, 45.04% id in 242 aa, and to Bordetella pertussis chaperone protein precursor FimB or FhaD SWALL:FIMB_BORPE (SWALL:P33409) (244 aa) fasta scores: E(): 4.8e-31, 44.08% id in 245 aa; fimbria-related chaperone 110792..111529 Burkholderia pseudomallei K96243 3096871 YP_110116.1 CDS BPSS0093 NC_006351.1 111753 114386 D Similar to Escherichia coli outer membrane usher protein precursor AfaC SWALL:AFAC_ECOLI (SWALL:P53517) (859 aa) fasta scores: E(): 8.4e-77, 33.4% id in 877 aa; outer membrane usher protein 111753..114386 Burkholderia pseudomallei K96243 3096795 YP_110117.1 CDS BPSS0094 NC_006351.1 114379 114951 D Similar to Xylella fastidiosa fimbrial subunit precursor xf0083 SWALL:Q9PH63 (EMBL:AE003862) (184 aa) fasta scores: E(): 9.2e-12, 37.5% id in 176 aa, and to Escherichia coli F17 fimbrial protein precursor F17a-A SWALL:FMF3_ECOLI (SWALL:P11312) (180 aa) fasta scores: E(): 4.4e-10, 38.46% id in 169 aa; fimbria subunit protein 114379..114951 Burkholderia pseudomallei K96243 3096791 YP_110118.1 CDS BPSS0095 NC_006351.1 115016 115672 D Similar to Yersinia pestis membrane protein ypo1468 or ypo0975 or y2703 or y3366 SWALL:Q8XF18 (EMBL:AJ414148) (228 aa) fasta scores: E(): 8.8e-07, 27.67% id in 206 aa; hypothetical protein 115016..115672 Burkholderia pseudomallei K96243 3096792 YP_110119.1 CDS BPSS0096 NC_006351.1 115675 117351 D Similar to Yersinia pestis membrane protein ypo2953 or y1530 SWALL:Q8ZCM8 (EMBL:AJ414154) (560 aa) fasta scores: E(): 8.4e-25, 23.54% id in 565 aa, and to Yersinia pestis OmpA-family membrane protein ypo0974 or y2702 or y3365 SWALL:Q8ZHC6 (EMBL:AJ414145) (578 aa) fasta scores: E(): 7.2e-19, 28.17% id in 575 aa; OmpA family protein 115675..117351 Burkholderia pseudomallei K96243 3096859 YP_110120.1 CDS BPSS0097 NC_006351.1 117729 118268 D Similar to Yersinia pestis hypothetical protein ypo2939 SWALL:Q8ZCN9 (EMBL:AJ414154) (174 aa) fasta scores: E(): 2.4e-48, 84.75% id in 164 aa, and to Salmonella typhi hypothetical protein sty0297 SWALL:Q8Z970 (EMBL:AL627266) (180 aa) fasta scores: E(): 6.7e-48, 76.66% id in 180 aa. Note: Also similar to BPSS0173 (194 aa) fasta scores: E(): 2e-48, 81.818% identity in 165 aa overlap; hypothetical protein 117729..118268 Burkholderia pseudomallei K96243 3096823 YP_110121.1 CDS BPSS0098 NC_006351.1 118302 119801 D Similar to Yersinia pestis hypothetical protein ypo2938 SWALL:Q8ZCP0 (EMBL:AJ414154) (500 aa) fasta scores: E(): 1.3e-175, 84.6% id in 500 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciI protein SWALL:Q93IS7 (EMBL:AJ320483) (497 aa) fasta scores: E(): 9.3e-171, 83.36% id in 499 aa. Note: Also similar to BPSS0172 (500 aa) fasta scores: E(): 1.5e-182, 84.168% identity in 499 aa overlap; hypothetical protein 118302..119801 Burkholderia pseudomallei K96243 3096824 YP_110122.1 CDS BPSS0099 NC_006351.1 120001 120483 D Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0279 or SciM SWALL:Q93IS3 (EMBL:AE008707) (161 aa) fasta scores: E(): 8e-39, 63.29% id in 158 aa, and to Yersinia pestis hypothetical protein ypo2937 SWALL:Q8ZCP1 (EMBL:AJ414154) (161 aa) fasta scores: E(): 7.9e-38, 55.69% id in 158 aa. Note: Also similar to BPSS0171 (162 aa) fasta scores: E(): 1.8e-43, 66.456% identity in 158 aa overlap; hypothetical protein 120001..120483 Burkholderia pseudomallei K96243 3096775 YP_110123.1 CDS BPSS0100 NC_006351.1 120671 121153 D Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciN protein precursor SciN SWALL:Q93IS2 (EMBL:AJ320483) (163 aa) fasta scores: E(): 5.3e-21, 39.21% id in 153 aa, and to Pseudomonas aeruginosa hypothetical protein pa0080 SWALL:Q9I752 (EMBL:AE004447) (154 aa) fasta scores: E(): 1.4e-12, 35.24% id in 122 aa. Note: Also similar to BPSS0170 (171 aa) fasta scores: E(): 5.8e-24, 45.860% identity in 157 aa overlap; hypothetical protein 120671..121153 Burkholderia pseudomallei K96243 3096919 YP_110124.1 CDS BPSS0101 NC_006351.1 121159 122508 D Similar to Yersinia pestis hypothetical protein ypo2934 or y1549 SWALL:Q8ZCP3 (EMBL:AJ414154) (449 aa) fasta scores: E(): 3.1e-111, 62.61% id in 444 aa, and to Salmonella typhi hypothetical protein sty0304 SWALL:Q8Z966 (EMBL:AL627266) (447 aa) fasta scores: E(): 2.7e-97, 57.9% id in 449 aa. Note: Also similar to BPSS0169 (449 aa) fasta scores: E(): 1.1e-108, 62.054% identity in 448 aa overlap; hypothetical protein 121159..122508 Burkholderia pseudomallei K96243 3096920 YP_110125.1 CDS BPSS0102 NC_006351.1 122505 123806 D Similar to Salmonella typhi membrane protein sty0305 SWALL:Q8Z965 (EMBL:AL627266) (433 aa) fasta scores: E(): 1.8e-76, 55.78% id in 380 aa, and to Yersinia pestis OmpA-family membrane protein ypo0514 SWALL:Q8ZII3 (EMBL:AJ414143) (536 aa) fasta scores: E(): 3.2e-24, 30.93% id in 375 aa. Note: The N-terminal region of this CDS does not present similarities to any of the database matches. Also similar to BPSS0168 (422 aa) fasta scores: E(): 1.9e-61, 46.283% identity in 417 aa overlap; hypothetical protein 122505..123806 Burkholderia pseudomallei K96243 3096743 YP_110126.1 CDS BPSS0103 NC_006351.1 123821 127729 D Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciS protein precursor SWALL:Q93IR7 (EMBL:AJ320483) (1289 aa) fasta scores: E(): 8.3e-165, 45.82% id in 1305 aa, and to Yersinia pestis membrane protein ypo2724 SWALL:Q8ZD68 (EMBL:AJ414153) (1275 aa) fasta scores: E(): 2.4e-94, 34.01% id in 1317 aa. Note: Also similar to BPSS0167 (1359 aa) fasta scores: E(): 3.2e-101, 47.210% identity in 1362 aa overlap; hypothetical protein 123821..127729 Burkholderia pseudomallei K96243 3096739 YP_110127.1 CDS BPSS0104 NC_006351.1 127919 128488 D hypothetical protein 127919..128488 Burkholderia pseudomallei K96243 3096740 YP_110128.1 CDS BPSS0105 NC_006351.1 128553 131252 D Similar in almost its full length to Yersinia pestis hypothetical protein ypo2725 SWALL:Q8ZD67 (EMBL:AJ414153) (921 aa) fasta scores: E(): 8e-76, 45.87% id in 896 aa, C-terminal region to Shigella flexneri Rhs-family protein sf0265 SWALL:AAN41925 (EMBL:AE015061) (737 aa) fasta scores: E(): 7.7e-48, 41.75% id in 697 aa, and C-terminal region where the highly repetitive fragment is to Thermoproteus tenax virus 1 viral protein Tpx SWALL:VTP3_TTV1V (SWALL:P19275) (474 aa) fasta scores: E(): 1.6e-32, 59.53% id in 304 aa. Note: Contains a highly repetitive region at the C-terminal domain; hypothetical protein 128553..131252 Burkholderia pseudomallei K96243 3096600 YP_110129.1 CDS BPSS0108 NC_006351.1 134954 136312 R Similar to Yersinia pestis hypothetical protein ypo2951 or y1532 SWALL:Q8ZCN0 (EMBL:AJ414154) (445 aa) fasta scores: E(): 4e-50, 36.11% id in 407 aa; hypothetical protein complement(134954..136312) Burkholderia pseudomallei K96243 3096703 YP_110130.1 CDS BPSS0109 NC_006351.1 136345 137373 R Similar to Yersinia pestis fimbrial protein ypo2950 or y1533 SWALL:Q8ZCN1 (EMBL:AJ414154) (343 aa) fasta scores: E(): 0.00019, 23.52% id in 357 aa, and C-terminal region to Salmonella typhimurium fimbrial-like protein precursor FimF or stm0548 SWALL:FIMF_SALTY (SWALL:P37926) (172 aa) fasta scores: E(): 0.41, 27.38% id in 168 aa; hypothetical protein complement(136345..137373) Burkholderia pseudomallei K96243 3096704 YP_110131.1 CDS BPSS0110 NC_006351.1 137428 138498 R Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0266 or SciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 9.6e-42, 43.42% id in 350 aa, and to Yersinia pestis hypothetical protein ypo2949 SWALL:Q8ZCN2 (EMBL:AJ414154) (393 aa) fasta scores: E(): 1.1e-31, 38.03% id in 376 aa. Note: Also similar to BPSS0180 (382 aa) fasta scores: E(): 3.7e-28, 44.101% identity in 356 aa overlap; hypothetical protein complement(137428..138498) Burkholderia pseudomallei K96243 3096818 YP_110132.1 CDS BPSS0111 NC_006351.1 138517 139566 R Similar to Yersinia pestis hypothetical protein ypo2948 SWALL:Q8ZCN3 (EMBL:AJ414154) (341 aa) fasta scores: E(): 5.7e-72, 52.1% id in 332 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 9.5e-68, 57.54% id in 285 aa. Note: Also similar to BPSS0179 (363 aa) fasta scores: E(): 2.8e-68, 55.224% identity in 335 aa overlap; hypothetical protein complement(138517..139566) Burkholderia pseudomallei K96243 3096745 YP_110133.1 CDS BPSS0112 NC_006351.1 139563 141443 R Similar to Yersinia pestis hypothetical protein ypo2947 or y1537 SWALL:Q8ZCN4 (EMBL:AJ414154) (626 aa) fasta scores: E(): 3.3e-177, 64.05% id in 626 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 8.1e-163, 60.92% id in 627 aa. Note: Also similar to BPSS0178 (630 aa) fasta scores: E(): 1.5e-156, 63.796% identity in 627 aa overlap; hypothetical protein complement(139563..141443) Burkholderia pseudomallei K96243 3096746 YP_110134.1 CDS BPSS0113 NC_006351.1 141445 141963 R Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0269 or SciD SWALL:Q93IT2 (EMBL:AE008707) (164 aa) fasta scores: E(): 1.2e-21, 43.79% id in 153 aa, and to Yersinia pestis hypothetical protein ypo2728 or y1561 SWALL:Q8ZD64 (EMBL:AJ414153) (159 aa) fasta scores: E(): 3.1e-20, 40.12% id in 157 aa. Note: Also similar to BPSS0177 (194 aa) fasta scores: E(): 1.6e-24, 45.912% identity in 159 aa overlap; hypothetical protein complement(141445..141963) Burkholderia pseudomallei K96243 3094983 YP_110135.1 CDS BPSS0114 NC_006351.1 141950 142804 R Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciE protein SWALL:Q93IT1 (EMBL:AJ320483) (279 aa) fasta scores: E(): 5.9e-38, 39.85% id in 276 aa, and to Yersinia pestis hypothetical protein ypo2727 or y1560 SWALL:Q8ZD65 (EMBL:AJ414153) (268 aa) fasta scores: E(): 8.6e-36, 39.36% id in 254 aa. Note: Also similar to BPSS0176 (322 aa) fasta scores: E(): 4.8e-29, 39.590% identity in 293 aa overlap; hypothetical protein complement(141950..142804) Burkholderia pseudomallei K96243 3094984 YP_110136.1 CDS BPSS0115 NC_006351.1 142788 143843 R hypothetical protein complement(142788..143843) Burkholderia pseudomallei K96243 3096151 YP_110137.1 CDS BPSS0116 NC_006351.1 144273 146918 D Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium ATPase with chaperone activity, homolog of Yersinia ClpB stm0272 or SciG SWALL:Q93IS9 (EMBL:AE008707) (879 aa) fasta scores: E(): 4.1e-196, 63.58% id in 865 aa, and to Yersinia pestis Clp ATPase ClpB or ypo0506 or y3669 SWALL:Q8ZIJ2 (EMBL:AJ414143) (867 aa) fasta scores: E(): 1.9e-121, 44.6% id in 843 aa; chaperone-related protein 144273..146918 Burkholderia pseudomallei K96243 3097105 YP_110138.1 CDS BPSS0117 NC_006351.1 147309 150353 R Similar to Ralstonia solanacearum probable capsular synthesis regulatory RcsC or rsp1622 or rs02179 SWALL:Q8XPL6 (EMBL:AL646086) (1098 aa) fasta scores: E(): 1.2e-48, 27.88% id in 1126 aa, and C-terminal region to Escherichia coli sensor protein EvgS precursor or b2370 SWALL:EVGS_ECOLI (SWALL:P30855) (1197 aa) fasta scores: E(): 2.1e-40, 32.07% id in 555 aa; histidine kinase/response regulator fusion protein complement(147309..150353) Burkholderia pseudomallei K96243 3097106 YP_110139.1 CDS BPSS0118 NC_006351.1 151025 151285 D hypothetical protein 151025..151285 Burkholderia pseudomallei K96243 3096741 YP_110140.1 CDS BPSS0119 NC_006351.1 151956 152618 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or c2760 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 9.3e-24, 41.34% id in 208 aa, and to Pseudomonas aeruginosa probable response regulator pa4080 SWALL:Q9HWU8 (EMBL:AE004824) (214 aa) fasta scores: E(): 6.8e-35, 47.84% id in 209 aa. Note: Also similar to BPSS0124 (243 aa) fasta scores: E(): 3.7e-33, 45.283% identity in 212 aa overlap; two-component system response regulator complement(151956..152618) Burkholderia pseudomallei K96243 3096821 YP_110141.1 CDS BPSS0120 NC_006351.1 153167 155551 R Similar to Yersinia pestis outer membrane fimbrial usher protein ypo0302 or y0562 SWALL:Q8ZJ27 (EMBL:AJ414142) (792 aa) fasta scores: E(): 1.4e-120, 42.67% id in 764 aa, and to Escherichia coli outer membrane usher protein precursor FanD SWALL:FAND_ECOLI (SWALL:P12050) (783 aa) fasta scores: E(): 5.4e-22, 22.91% id in 768 aa; fimbrial usher protein complement(153167..155551) Burkholderia pseudomallei K96243 3096822 YP_110142.1 CDS BPSS0121 NC_006351.1 155912 156622 R member of the periplasmic pilus chaperone family of proteins; periplasmic chaperone protein complement(155912..156622) Burkholderia pseudomallei K96243 3096514 YP_110143.1 CDS BPSS0122 NC_006351.1 157098 157745 R Similar to Yersinia pestis exported protein ypo0301 or y0561 SWALL:Q8ZJ28 (EMBL:AJ414142) (212 aa) fasta scores: E(): 3.1e-26, 41.09% id in 219 aa; hypothetical protein complement(157098..157745) Burkholderia pseudomallei K96243 3096377 YP_110144.1 CDS BPSS0123 NC_006351.1 157968 158624 R Similar to Yersinia pestis exported protein ypo0301 or y0561 SWALL:Q8ZJ28 (EMBL:AJ414142) (212 aa) fasta scores: E(): 6.2e-34, 48.13% id in 214 aa; hypothetical protein complement(157968..158624) Burkholderia pseudomallei K96243 3096378 YP_110145.1 CDS BPSS0124 NC_006351.1 159632 160324 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or c2760 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 1.5e-21, 35.61% id in 205 aa, and to Pseudomonas aeruginosa probable response regulator pa4080 SWALL:Q9HWU8 (EMBL:AE004824) (214 aa) fasta scores: E(): 9.9e-31, 47.61% id in 210 aa. Note: Also similar to BPSS0119 (221 aa) fasta scores: E(): 6.9e-29, 45.283% identity in 212 aa overlap; response regulator 159632..160324 Burkholderia pseudomallei K96243 3096846 YP_110146.1 CDS BPSS0125 NC_006351.1 160633 160926 R Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 4e-06, 34.4% id in 93 aa, and low similarity to Rhodobacter capsulatus trans-acting regulatory protein HvrA SWALL:HVRA_RHOCA (SWALL:P42505) (102 aa) fasta scores: E(): 0.84, 31.64% id in 79 aa; regulatory protein complement(160633..160926) Burkholderia pseudomallei K96243 3097252 YP_110147.1 CDS BPSS0126 NC_006351.1 161417 162742 D Similar to Agrobacterium vitis tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 1.5e-62, 42.23% id in 412 aa, and to Xanthomonas campestris MFS transporter xcc4227 SWALL:AAM43443 (EMBL:AE012550) (461 aa) fasta scores: E(): 1.2e-100, 61.88% id in 446 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; transport system, membrane protein 161417..162742 Burkholderia pseudomallei K96243 3097253 YP_110148.1 CDS glxK NC_006351.1 162816 163982 D Similar to Escherichia coli glycerate kinase 1 GlxK or GlxB5 or b0514 SWALL:GRK1_ECOLI (SWALL:P77364) (381 aa) fasta scores: E(): 2.6e-63, 55.05% id in 376 aa, and to Xanthomonas axonopodis glycerate kinase xac4360 SWALL:AAM39190 (EMBL:AE012090) (389 aa) fasta scores: E(): 1.6e-77, 64.3% id in 381 aa; glycerate kinase 1 162816..163982 Burkholderia pseudomallei K96243 3096478 YP_110149.1 CDS pyk NC_006351.1 164175 165629 D Similar to Bacillus stearothermophilus pyruvate kinase Pyk SWALL:KPYK_BACST (SWALL:Q02499) (587 aa) fasta scores: E(): 1.7e-60, 41.27% id in 470 aa, and to Pseudomonas aeruginosa pyruvate kinase I PykF or pa1498 SWALL:Q9I3L4 (EMBL:AE004578) (477 aa) fasta scores: E(): 1.5e-83, 55.57% id in 466 aa; pyruvate kinase 164175..165629 Burkholderia pseudomallei K96243 3095795 YP_110150.1 CDS BPSS0129 NC_006351.1 165876 167096 D Similar to Escherichia coli carbohydrate diacid regulator CdaR or SdaR SWALL:CDAR_ECOLI (SWALL:P37047) (385 aa) fasta scores: E(): 8.2e-49, 40.63% id in 379 aa, and to Xanthomonas campestris sugar diacide regulator xcc4225 SWALL:Q8P353 (EMBL:AE012550) (392 aa) fasta scores: E(): 2.2e-47, 40.56% id in 392 aa; transcriptional regulator 165876..167096 Burkholderia pseudomallei K96243 3095658 YP_110151.1 CDS BPSS0130 NC_006351.1 168157 170964 D Similar in its full length to Ralstonia solanacearum peptide synthase rsp1419 or rs03122 SWALL:Q8XQ67 (EMBL:AL646084) (937 aa) fasta scores: E(): 0, 61.11% id in 936 aa, and in its N-terminal region to Bacillus subtilis polyketide synthase PksJ SWALL:PKSJ_BACSU (SWALL:P40806) (557 aa) fasta scores: E(): 8.8e-64, 35.95% id in 534 aa; peptide synthase 168157..170964 Burkholderia pseudomallei K96243 3096839 YP_110152.1 CDS BPSS0131 NC_006351.1 170998 171984 D Similar to Rhizobium meliloti epimerase dehydratase, red superfamily, possibly UDP-glucose 4-epimerase rb0631 or smb21052 SWALL:Q92VR8 (EMBL:AL603644) (321 aa) fasta scores: E(): 1.5e-08, 26.68% id in 311 aa, and to Streptomyces avermitilis dtdp-glucose 4,6-dehydratase AveBII SWALL:Q9S0P5 (EMBL:AB032523) (355 aa) fasta scores: E(): 1.1e-07, 25.76% id in 260 aa; dehydratase 170998..171984 Burkholderia pseudomallei K96243 3096840 YP_110153.1 CDS BPSS0132 NC_006351.1 172008 172403 D Similar to Rhizobium loti hypothetical protein mlr5282 SWALL:Q98C61 (EMBL:AP003006) (148 aa) fasta scores: E(): 6.3e-06, 29.45% id in 129 aa; hypothetical protein 172008..172403 Burkholderia pseudomallei K96243 3096484 YP_110154.1 CDS BPSS0133 NC_006351.1 172666 173691 D Similar to Actinomadura hibisca ORF6 SWALL:O32456 (EMBL:D87924) (341 aa) fasta scores: E(): 3e-36, 36.73% id in 343 aa, and to Streptomyces lipmanii O-demethylpuromycin-O-methyltransferase DmpM SWALL:DMPM_STRLP (SWALL:P42712) (376 aa) fasta scores: E(): 7.8e-32, 35.65% id in 331 aa; methyltransferase 172666..173691 Burkholderia pseudomallei K96243 3096512 YP_110155.1 CDS BPSS0134 NC_006351.1 173732 174673 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1e-25, 34.23% id in 295 aa, and to Pseudomonas putida transcriptional regulator, pp1393 SWALL:AAN67016 (EMBL:AE016779) (291 aa) fasta scores: E(): 7.9e-30, 38.88% id in 288 aa. Note: This CDS is longer in its N-terminal region than most of its database matches, lacks an appropriate translational start codon. Possible pseudogene; LysR family transcriptional regulator complement(173732..174673) Burkholderia pseudomallei K96243 3096513 YP_110156.1 CDS BPSS0135 NC_006351.1 174740 175159 D Similar to Ralstonia solanacearum hypothetical protein rsp1479 or rs03064 SWALL:Q8XQ07 (EMBL:AL646085) (150 aa) fasta scores: E(): 2e-17, 45.86% id in 133 aa; hypothetical protein 174740..175159 Burkholderia pseudomallei K96243 3096509 YP_110157.1 CDS BPSS0136 NC_006351.1 175204 176592 R Similar in its full length to Ralstonia solanacearum probable transmembrane protein rsc3143 or rs00460 SWALL:Q8XUP3 (EMBL:AL646073) (459 aa) fasta scores: E(): 1e-97, 58.48% id in 448 aa, and to Bradyrhizobium japonicum two-component hybrid sensor and regulator blr5677 SWALL:BAC50942 (EMBL:AP005955) (941 aa) fasta scores: E(): 1.7e-17, 32.38% id in 315 aa; hypothetical protein complement(175204..176592) Burkholderia pseudomallei K96243 3096594 YP_110158.1 CDS BPSS0137 NC_006351.1 177878 178165 D hypothetical protein 177878..178165 Burkholderia pseudomallei K96243 3096595 YP_110159.1 CDS BPSS0138 NC_006351.1 178341 178646 D No significant database matches. Possible alternative translational start site; hypothetical protein 178341..178646 Burkholderia pseudomallei K96243 3095948 YP_110160.1 CDS BPSS0139 NC_006351.1 179358 180737 D Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 179358..180737 Burkholderia pseudomallei K96243 3096726 YP_110161.1 CDS BPSS0140 NC_006351.1 180870 181817 R Similar to Escherichia coli O157:H7 periplasmic ribose-binding protein of ABC transport system z5689 or ecs5071 SWALL:Q8X5Q6 (EMBL:AE005642) (313 aa) fasta scores: E(): 3.9e-54, 54.27% id in 304 aa, and to Bacillus subtilis D-ribose-binding protein precursor RbsB SWALL:RBSB_BACSU (SWALL:P36949) (305 aa) fasta scores: E(): 1.6e-17, 31.31% id in 281 aa; sugar ABC transport system, lipoprotein complement(180870..181817) Burkholderia pseudomallei K96243 3096727 YP_110162.1 CDS BPSS0141 NC_006351.1 181894 182928 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribose transport system permease RbsC or b3750 or c4678 or z5251 or ecs4692 SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 6e-36, 45.48% id in 310 aa, and to Yersinia pestis sugar transport system permease ypo3963 or y3866 SWALL:Q8ZA55 (EMBL:AJ414160) (330 aa) fasta scores: E(): 2.3e-62, 60.67% id in 328 aa; sugar ABC transporter membrane protein complement(181894..182928) Burkholderia pseudomallei K96243 3096664 YP_110163.1 CDS BPSS0142 NC_006351.1 182971 184524 R Similar to Escherichia coli ribose transport ATP-binding protein RbsA or b3749 SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 1.2e-71, 45.4% id in 500 aa, and to Yersinia pestis sugar transport ATP-binding protein ypo3964 or y3865 SWALL:Q8ZA54 (EMBL:AJ414160) (507 aa) fasta scores: E(): 1.2e-90, 59.28% id in 501 aa; sugar ABC transporter ATP-binding protein complement(182971..184524) Burkholderia pseudomallei K96243 3095596 YP_110164.1 CDS BPSS0143 NC_006351.1 184511 185761 R Similar to Rhizobium meliloti transcription regulator protein r00475 or smc02172 SWALL:Q92SC9 (EMBL:AL591783) (409 aa) fasta scores: E(): 1.3e-34, 33.42% id in 386 aa, and to Agrobacterium tumefaciens transcriptional regulator, ROK family atu4655 or agr_l_455 SWALL:Q8U701 (EMBL:AE009394) (429 aa) fasta scores: E(): 2.9e-28, 31.93% id in 404 aa; transcriptional regulator complement(184511..185761) Burkholderia pseudomallei K96243 3095597 YP_110165.1 CDS BPSS0144 NC_006351.1 186668 189283 R N-terminal region similar to Clostridium sp. glucoamylase precursor Cga SWALL:AMYG_CLOSP (SWALL:P29761) (702 aa) fasta scores: E(): 8.9e-20, 37.14% id in 743 aa, and C-terminal end to Streptomyces violaceus alpha-amylase precursor Aml SWALL:AMY_STRVL (SWALL:P22998) (569 aa) fasta scores: E(): 7.5e-13, 37.8% id in 164 aa; amylase complement(186668..189283) Burkholderia pseudomallei K96243 3096596 YP_110166.1 CDS dbpA NC_006351.1 190115 191512 R exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA complement(190115..191512) Burkholderia pseudomallei K96243 3096710 YP_110167.1 CDS BPSS0146 NC_006351.1 191677 192306 R Similar to the C-terminal region of Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.3e-23, 38.64% id in 207 aa, and of Acinetobacter lwoffii hypothetical 36.5 kDa protein SWALL:Q934S0 (EMBL:U77658) (344 aa) fasta scores: E(): 1e-06, 26.22% id in 225 aa; hypothetical protein complement(191677..192306) Burkholderia pseudomallei K96243 3096811 YP_110168.1 CDS BPSS0147 NC_006351.1 192341 193654 R Similar to Klebsiella pneumoniae citrate-proton symporter CitH or Cit SWALL:CIT1_KLEPN (SWALL:P16482) (444 aa) fasta scores: E(): 4.8e-44, 37.05% id in 421 aa, and to the plasmid borne Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 3.7e-41, 35.84% id in 399 aa; transporter protein complement(192341..193654) Burkholderia pseudomallei K96243 3096812 YP_110169.1 CDS BPSS0148 NC_006351.1 193695 194885 R Similar to Campylobacter jejuni hippurate hydrolase HipO or cj0985C SWALL:HIPO_CAMJE (SWALL:P45493) (383 aa) fasta scores: E(): 2.3e-64, 47.53% id in 385 aa, and to Pseudomonas aeruginosa probable hydrolase pa4344 SWALL:Q9HW57 (EMBL:AE004850) (406 aa) fasta scores: E(): 1.3e-86, 59.17% id in 387 aa; hypothetical protein complement(193695..194885) Burkholderia pseudomallei K96243 3096644 YP_110170.1 CDS BPSS0149 NC_006351.1 195065 195967 D Similar to Comamonas testosteroni TsaR SWALL:P94678 (EMBL:U32622) (298 aa) fasta scores: E(): 2.3e-35, 37.79% id in 299 aa, and to Escherichia coli transcriptional regulator AbgR or b1339 SWALL:ABGR_ECOLI (SWALL:P77744) (302 aa) fasta scores: E(): 7e-28, 32.64% id in 291 aa; LysR family transcriptional regulator 195065..195967 Burkholderia pseudomallei K96243 3095854 YP_110171.1 CDS BPSS0150 NC_006351.1 196307 197116 R Low similarity to Pseudomonas aeruginosa hypothetical protein pa5101 SWALL:Q9HU82 (EMBL:AE004923) (265 aa) fasta scores: E(): 5.2e-20, 36.07% id in 219 aa, and to Rhizobium loti hypothetical protein mll1215 SWALL:Q98L21 (EMBL:AP002996) (275 aa) fasta scores: E(): 2.2e-08, 34.57% id in 214 aa; hypothetical protein complement(196307..197116) Burkholderia pseudomallei K96243 3095855 YP_110172.1 CDS BPSS0151 NC_006351.1 197293 198459 D Similar to Pseudomonas aeruginosa hypothetical protein pa5102 SWALL:Q9HU81 (EMBL:AE004923) (312 aa) fasta scores: E(): 1.8e-58, 49.21% id in 317 aa, and to Burkholderia cepacia omega-3 fatty acid desaturase SWALL:Q9ZGQ3 (EMBL:AF076477) (334 aa) fasta scores: E(): 8.2e-05, 28.78% id in 264 aa. Note: CDS is longer in its N-terminal region than most of its database matches, possible alternative start codon at residue 51; desaturase 197293..198459 Burkholderia pseudomallei K96243 3096555 YP_110173.1 CDS BPSS0152 NC_006351.1 198951 199391 D Similar to Ralstonia solanacearum transmembrane protein rsc3150 or rs00450 SWALL:Q8XUN7 (EMBL:AL646073) (143 aa) fasta scores: E(): 3e-25, 72.26% id in 137 aa, and to Pseudomonas aeruginosa hypothetical protein pa5183 SWALL:Q9HU06 (EMBL:AE004931) (135 aa) fasta scores: E(): 2.7e-13, 47.94% id in 146 aa; hypothetical protein 198951..199391 Burkholderia pseudomallei K96243 3095697 YP_110174.1 CDS gltI NC_006351.1 199973 200872 R Similar to Escherichia coli glutamate/aspartate periplasmic binding protein precursor GltI or b0655 SWALL:GLTI_ECOLI (SWALL:P37902) (302 aa) fasta scores: E(): 1.8e-60, 55% id in 300 aa, and to Ralstonia solanacearum probable amino-acid-binding periplasmic rsc0481 or rs04394 SWALL:Q8Y255 (EMBL:AL646059) (313 aa) fasta scores: E(): 1.8e-64, 59.37% id in 288 aa; glutamate/aspartate periplasmic binding protein precursor complement(199973..200872) Burkholderia pseudomallei K96243 3096477 YP_110175.1 CDS dadA NC_006351.1 201036 202283 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 D-amino acid dehydrogenase small subunit DadA or DadR or b1189 or c1638 or z1952 or ecs1684 SWALL:DADA_ECOLI (SWALL:P29011) (432 aa) fasta scores: E(): 5.6e-51, 37.85% id in 420 aa, and to Pseudomonas aeruginosa D-amino acid dehydrogenase 2 small subunit pa5084 SWALL:DAD2_PSEAE (SWALL:Q9HU99) (416 aa) fasta scores: E(): 1e-68, 51.44% id in 414 aa; D-amino acid dehydrogenase small subunit complement(201036..202283) Burkholderia pseudomallei K96243 3096536 YP_110176.1 CDS BPSS0155 NC_006351.1 202436 203368 R Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 1.7e-16, 34.95% id in 246 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5085 SWALL:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 1.7e-30, 41.58% id in 291 aa; LysR family transcriptional regulator complement(202436..203368) Burkholderia pseudomallei K96243 3095698 YP_110177.1 CDS BPSS0156 NC_006351.1 203913 204674 R Similar to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase rsc1029 or rs04221 SWALL:Q8Y0L4 (EMBL:AL646062) (246 aa) fasta scores: E(): 6.8e-24, 39.5% id in 243 aa, and to Bacillus cereus benzil reductase YueD SWALL:Q8RJ14 (EMBL:AB052927) (249 aa) fasta scores: E(): 1.8e-19, 34.04% id in 235 aa; short chain dehydrogenase complement(203913..204674) Burkholderia pseudomallei K96243 3096420 YP_110178.1 CDS BPSS0157 NC_006351.1 205043 205462 D hypothetical protein 205043..205462 Burkholderia pseudomallei K96243 3096326 YP_110179.1 CDS BPSS0158 NC_006351.1 205904 207820 D Very low similarity to Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 1.3e-16, 30.72% id in 677 aa, and in its C-terminal region to Anabaena sp. hypothetical protein all3696 SWALL:Q8YQW5 (EMBL:AP003594) (379 aa) fasta scores: E(): 2.1e-06, 27.71% id in 368 aa; hypothetical protein 205904..207820 Burkholderia pseudomallei K96243 3096327 YP_110180.1 CDS BPSS0159 NC_006351.1 208096 210993 D Similar to Xanthomonas campestris hypothetical protein xcc2894 SWALL:Q8P6S1 (EMBL:AE012403) (781 aa) fasta scores: E(): 2.6e-40, 34.17% id in 793 aa, and to Mycobacterium tuberculosis hypothetical protein rv0584 or mt0612 or mtv039.22 SWALL:O86365 (EMBL:AL021942) (877 aa) fasta scores: E(): 4.7e-37, 38.47% id in 850 aa; hypothetical protein 208096..210993 Burkholderia pseudomallei K96243 3095945 YP_110181.1 CDS BPSS0160 NC_006351.1 211595 212653 D Similar to Pseudomonas aeruginosa pyoverdine biosynthesis protein PvcA or pa2254 SWALL:Q9I1L5 (EMBL:AE004651) (328 aa) fasta scores: E(): 1.5e-74, 61.16% id in 309 aa, and to the N-terminal region of Vibrio cholerae PvcA protein vc1949 SWALL:Q9KQP9 (EMBL:AE004270) (608 aa) fasta scores: E(): 1.3e-13, 30.45% id in 243 aa; siderophore biosynthesis-related protein 211595..212653 Burkholderia pseudomallei K96243 3096465 YP_110182.1 CDS BPSS0161 NC_006351.1 212650 213564 D Similar to Pseudomonas aeruginosa pyoverdine biosynthesis protein PvcB or pa2255 SWALL:Q9I1L4 (EMBL:AE004651) (291 aa) fasta scores: E(): 4.4e-76, 61.03% id in 290 aa, and to Vibrio cholerae PvcB protein vc1944 SWALL:Q9KQQ4 (EMBL:AE004270) (287 aa) fasta scores: E(): 1.1e-54, 48.86% id in 264 aa; siderophore biosynthesis-related protein 212650..213564 Burkholderia pseudomallei K96243 3096466 YP_110183.1 CDS BPSS0162 NC_006351.1 213569 215074 D Similar to Pseudomonas aeruginosa pyoverdin chromophore biosynthetic protein PvcC or pa2256 SWALL:PVCC_PSEAE (SWALL:O30372) (500 aa) fasta scores: E(): 2.2e-156, 76.17% id in 491 aa, and to Escherichia coli 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component HpaB SWALL:HPAB_ECOLI (SWALL:Q57160) (520 aa) fasta scores: E(): 2.5e-81, 43.84% id in 504 aa; siderophore biosynthesis-related protein 213569..215074 Burkholderia pseudomallei K96243 3096493 YP_110184.1 CDS asnO NC_006351.1 215120 216988 D Similar to Bacillus subtilis asparagine synthetase [glutamine-hydrolyzing] 3 AsnO SWALL:ASNO_BACSU (SWALL:O05272) (614 aa) fasta scores: E(): 1.6e-68, 42.01% id in 626 aa, and to Streptomyces aureofaciens asparagine synthase homolog TcsG SWALL:Q9FAR2 (EMBL:AB039379) (609 aa) fasta scores: E(): 2.6e-128, 54.76% id in 619 aa; asparagine synthase 215120..216988 Burkholderia pseudomallei K96243 3096020 YP_110185.1 CDS BPSS0164 NC_006351.1 217017 217988 D Similar to Mycobacterium tuberculosis quinone oxidoreductase rv1454c or mt1501 or mtv007.01C SWALL:O53146 (EMBL:AL021184) (335 aa) fasta scores: E(): 2.6e-54, 54.1% id in 329 aa, and to Pseudomonas aeruginosa quinone oxidoreductase Qor or pa0023 SWALL:QOR_PSEAE (SWALL:P43903) (325 aa) fasta scores: E(): 3.4e-42, 46.27% id in 322 aa; quinone oxidoreductase 217017..217988 Burkholderia pseudomallei K96243 3096415 YP_110186.1 CDS BPSS0165 NC_006351.1 218043 218969 D Similar to Salmonella typhi 3,4-dihydroxyphenylacetate 2,3-dioxygenase sty1137 SWALL:Q8Z7Q1 (EMBL:AL627269) (283 aa) fasta scores: E(): 6.7e-18, 29.21% id in 291 aa, and to Escherichia coli 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpcB SWALL:HPCB_ECOLI (SWALL:Q05353) (275 aa) fasta scores: E(): 4.2e-16, 28.95% id in 259 aa; dioxygenase 218043..218969 Burkholderia pseudomallei K96243 3096416 YP_110187.1 CDS BPSS0166 NC_006351.1 219213 220175 R Similar to Pseudomonas aeruginosa transcriptional regulator for exotoxin A production PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 1.3e-42, 42.06% id in 290 aa, and to Salmonella typhi possible LysR-family transcriptional regulator sty3037 SWALL:Q8Z482 (EMBL:AL627276) (310 aa) fasta scores: E(): 4.1e-25, 30.84% id in 308 aa; LysR family transcriptional regulator complement(219213..220175) Burkholderia pseudomallei K96243 3096735 YP_110188.1 CDS BPSS0167 NC_006351.1 221397 225473 R Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciS protein precursor SWALL:Q93IR7 (EMBL:AJ320483) (1289 aa) fasta scores: E(): 2.4e-141, 45.3% id in 1351 aa, and to Yersinia pestis membrane protein ypo2724 SWALL:Q8ZD68 (EMBL:AJ414153) (1275 aa) fasta scores: E(): 3.4e-48, 29.77% id in 1360 aa. Note: The amino acid residues between approx. position 255 and position 320 present no similarities to the database matches. Also similar to BPSS0103 (1303 aa) fasta scores: E(): 5.1e-92, 47.210% identity in 1362 aa overlap; hypothetical protein complement(221397..225473) Burkholderia pseudomallei K96243 3096619 YP_110189.1 CDS BPSS0168 NC_006351.1 225502 226767 R Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium outer membrane protein, OmpA family stm0282 or SciP SWALL:Q93IS0 (EMBL:AE008707) (434 aa) fasta scores: E(): 6.7e-63, 48.33% id in 391 aa, and to Pseudomonas aeruginosa hypothetical protein pa0078 SWALL:Q9I754 (EMBL:AE004447) (449 aa) fasta scores: E(): 1.3e-22, 37.44% id in 414 aa. Note: Also similar to BPSS0102 (434 aa) fasta scores: E(): 2.1e-55, 46.283% identity in 417 aa overlap; hypothetical protein complement(225502..226767) Burkholderia pseudomallei K96243 3096620 YP_110190.1 CDS BPSS0169 NC_006351.1 226856 228202 R Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0281 or SciO SWALL:Q93IS1 (EMBL:AE008707) (447 aa) fasta scores: E(): 4.3e-107, 59.73% id in 447 aa, and to Yersinia pestis hypothetical protein ypo2934 or y1549 SWALL:Q8ZCP3 (EMBL:AJ414154) (449 aa) fasta scores: E(): 3.6e-97, 55.05% id in 445 aa. Note: Also similar to BPSS0101 (453 aa) fasta scores: E(): 4.5e-106, 62.054% identity in 448 aa overlap; hypothetical protein complement(226856..228202) Burkholderia pseudomallei K96243 3097178 YP_110191.1 CDS BPSS0170 NC_006351.1 228224 228736 R Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciN protein precursor SWALL:Q93IS2 (EMBL:AJ320483) (163 aa) fasta scores: E(): 2.9e-21, 46.25% id in 160 aa, and to Pseudomonas aeruginosa hypothetical protein pa1666 SWALL:Q9I359 (EMBL:AE004594) (168 aa) fasta scores: E(): 6.4e-13, 39.85% id in 138 aa. Note: Also similar to BPSS0100 (161 aa) fasta scores: E(): 2.9e-21, 45.860% identity in 157 aa overlap; lipoprotein complement(228224..228736) Burkholderia pseudomallei K96243 3096592 YP_110192.1 CDS BPSS0171 NC_006351.1 228834 229319 R Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0279 or SciM SWALL:Q93IS3 (EMBL:AE008707) (161 aa) fasta scores: E(): 2.9e-42, 68.12% id in 160 aa, and to Yersinia pestis hypothetical protein ypo2937 SWALL:Q8ZCP1 (EMBL:AJ414154) (161 aa) fasta scores: E(): 8.8e-37, 57.59% id in 158 aa. Note: Also similar to BPSS0099 (161 aa) fasta scores: E(): 4.1e-42, 66.456% identity in 158 aa overlap; hypothetical protein complement(228834..229319) Burkholderia pseudomallei K96243 3096593 YP_110193.1 CDS BPSS0172 NC_006351.1 229436 230935 R Similar to Yersinia pestis hypothetical protein ypo2938 SWALL:Q8ZCP0 (EMBL:AJ414154) (500 aa) fasta scores: E(): 9.3e-166, 80.2% id in 500 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciI protein SWALL:Q93IS7 (EMBL:AJ320483) (497 aa) fasta scores: E(): 4.6e-161, 78.49% id in 493 aa. Note: Also similar to BPSS0098 (500 aa) fasta scores: E(): 5.9e-182, 84.168% identity in 499 aa overlap; hypothetical protein complement(229436..230935) Burkholderia pseudomallei K96243 3094961 YP_110194.1 CDS BPSS0173 NC_006351.1 230970 231551 R Similar to Yersinia pestis hypothetical protein ypo2939 SWALL:Q8ZCN9 (EMBL:AJ414154) (174 aa) fasta scores: E(): 1.8e-45, 78.31% id in 166 aa, and to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0273 or SciH SWALL:Q93IS8 (EMBL:AE008707) (180 aa) fasta scores: E(): 1.2e-44, 77.43% id in 164 aa. Note: This CDS is longer in its C-terminal region than most of its database matches and also similar to BPSS0097 (180 aa) fasta scores: E(): 4.5e-46, 81.818% identity in 165 aa overlap; hypothetical protein complement(230970..231551) Burkholderia pseudomallei K96243 3095382 YP_110195.1 CDS BPSS0174 NC_006351.1 231587 234526 R Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium ATPase with chaperone activity stm0272 or sciG SWALL:Q93IS9 (EMBL:AE008707) (879 aa) fasta scores: E(): 1.4e-75, 58.54% id in 948 aa, and to Yersinia enterocolitica Clp protease-associated protein ClpB SWALL:Q9F746 (EMBL:AF285784) (890 aa) fasta scores: E(): 1.7e-69, 55.59% id in 939 aa. Note: Also similar to BPSS1502 (1013 aa) fasta scores: E(): 1.8e-94, 44.865% identity in 1003 aa overlap; chaperone complement(231587..234526) Burkholderia pseudomallei K96243 3095383 YP_110196.1 CDS BPSS0175 NC_006351.1 235059 235778 D hypothetical protein 235059..235778 Burkholderia pseudomallei K96243 3096077 YP_110197.1 CDS BPSS0176 NC_006351.1 235775 236740 D Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciE protein SWALL:Q93IT1 (EMBL:AJ320483) (279 aa) fasta scores: E(): 6.8e-24, 38.69% id in 292 aa, and to Pseudomonas aeruginosa hypothetical protein pa0086 SWALL:Q9I746 (EMBL:AE004447) (281 aa) fasta scores: E(): 8.4e-23, 37.5% id in 272 aa. Note: Also similar to BPSS0114 (285 aa) fasta scores: E(): 7.9e-24, 39.590% identity in 293 aa overlap; hypothetical protein 235775..236740 Burkholderia pseudomallei K96243 3096401 YP_110198.1 CDS BPSS0177 NC_006351.1 236781 237308 D Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0269 or SciD SWALL:Q93IT2 (EMBL:AE008707) (164 aa) fasta scores: E(): 6.7e-24, 48.12% id in 160 aa, and to Yersinia pestis hypothetical protein ypo2728 or y1561 SWALL:Q8ZD64 (EMBL:AJ414153) (159 aa) fasta scores: E(): 3e-21, 38.71% id in 155 aa. Note: Also similar to BPSS0113 (173 aa) fasta scores: E(): 3.8e-25, 45.912% identity in 159 aa overlap; hypothetical protein 236781..237308 Burkholderia pseudomallei K96243 3096402 YP_110199.1 CDS BPSS0178 NC_006351.1 237339 239228 D Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 3.9e-156, 61.14% id in 628 aa, and to Yersinia pestis hypothetical protein ypo2947 or y1537 SWALL:Q8ZCN4 (EMBL:AJ414154) (626 aa) fasta scores: E(): 2.1e-143, 55.09% id in 628 aa. Note: Also similar to BPSS0112 (627 aa) fasta scores: E(): 1.2e-144, 63.796% identity in 627 aa overlap; hypothetical protein 237339..239228 Burkholderia pseudomallei K96243 3096156 YP_110200.1 CDS BPSS0179 NC_006351.1 239240 240313 D Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 1.2e-65, 56.29% id in 286 aa, and to Yersinia pestis hypothetical protein ypo2948 SWALL:Q8ZCN3 (EMBL:AJ414154) (341 aa) fasta scores: E(): 1.2e-57, 47.02% id in 319 aa. Note: This CDS is longer in its N-terminal region than most of its database matches and it is also similar to BPSS0111 (350 aa) fasta scores: E(): 4.6e-66, 55.224% identity in 335 aa overlap; hypothetical protein 239240..240313 Burkholderia pseudomallei K96243 3096542 YP_110201.1 CDS BPSS0180 NC_006351.1 240310 241455 D Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0266 or SciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 1.7e-34, 45.33% id in 364 aa, and to Yersinia pestis hypothetical protein ypo2949 SWALL:Q8ZCN2 (EMBL:AJ414154) (393 aa) fasta scores: E(): 5.7e-20, 30.53% id in 393 aa. Note: Also similar to BPSS0110 (357 aa) fasta scores: E(): 1.3e-23, 44.101% identity in 356 aa overlap; hypothetical protein 240310..241455 Burkholderia pseudomallei K96243 3096543 YP_110202.1 CDS BPSS0181 NC_006351.1 241527 243854 D Similar to Yersinia pestis hypothetical protein ypo2725 SWALL:Q8ZD67 (EMBL:AJ414153) (921 aa) fasta scores: E(): 4.7e-87, 45.51% id in 580 aa, and to Shigella flexneri Rhs-family protein sf0265 SWALL:AAN41925 (EMBL:AE015061) (737 aa) fasta scores: E(): 2.4e-74, 46.15% id in 546 aa; hypothetical protein 241527..243854 Burkholderia pseudomallei K96243 3096254 YP_110203.1 CDS BPSS0182 NC_006351.1 243886 246363 D Similar in its full length to Yersinia pestis hypothetical y3665 SWALL:AAM87213 (EMBL:AE013969) (739 aa) fasta scores: E(): 6.7e-20, 24.39% id in 779 aa, C-terminal region to Yersinia pestis hypothetical protein ypo0509 SWALL:Q8ZII9 (EMBL:AJ414143) (540 aa) fasta scores: E(): 3.1e-09, 23.14% id in 566 aa, and N-terminal region to Rhizobium loti hypothetical protein mlr2351 SWALL:Q98IL3 (EMBL:AP002999) (367 aa) fasta scores: E(): 0.00016, 29.11% id in 261 aa; hypothetical protein 243886..246363 Burkholderia pseudomallei K96243 3096055 YP_110204.1 CDS BPSS0183 NC_006351.1 246360 247442 D Similar to the C-terminal region of Anabaena sp. hypothetical protein all3114 SWALL:Q8YSH1 (EMBL:AP003591) (576 aa) fasta scores: E(): 3.3e-14, 26.19% id in 313 aa, and to the full length of Synechocystis sp. hypothetical protein sll1446 SWALL:P74206 (EMBL:D90913) (320 aa) fasta scores: E(): 6.2e-10, 24.76% id in 323 aa; hypothetical protein 246360..247442 Burkholderia pseudomallei K96243 3096056 YP_110205.1 CDS BPSS0184 NC_006351.1 247624 248283 D hypothetical protein 247624..248283 Burkholderia pseudomallei K96243 3095906 YP_110206.1 CDS BPSS0185 NC_006351.1 248330 248704 D Similar to Yersinia pestis hypothetical protein ypo0511a or y3662 SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 2e-08, 40.17% id in 117 aa; hypothetical protein 248330..248704 Burkholderia pseudomallei K96243 3095746 YP_110207.1 CDS BPSS0186 NC_006351.1 249406 251322 R Similar to Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 2.9e-14, 28.5% id in 684 aa, and in its C-terminal region to Anabaena sp. hypothetical protein all3696 SWALL:Q8YQW5 (EMBL:AP003594) (379 aa) fasta scores: E(): 3.3e-05, 28.8% id in 368 aa; hypothetical protein complement(249406..251322) Burkholderia pseudomallei K96243 3095747 YP_110208.1 CDS BPSS0187 NC_006351.1 251662 252555 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1223 SWALL:Q9I4B5 (EMBL:AE004552) (297 aa) fasta scores: E(): 1.2e-82, 71.38% id in 297 aa, and to Rhizobium sp. SyrM protein homolog 1 SyrS1 or Y4pN SWALL:SYR1_RHISN (SWALL:P55619) (338 aa) fasta scores: E(): 3e-30, 39.46% id in 299 aa; LysR family transcriptional regulator complement(251662..252555) Burkholderia pseudomallei K96243 3096255 YP_110209.1 CDS BPSS0188 NC_006351.1 252651 253427 D Similar to Pseudomonas aeruginosa probable NAD(P)H deydrogenase pa1224 SWALL:Q9I4B4 (EMBL:AE004552) (259 aa) fasta scores: E(): 3.3e-82, 72.48% id in 258 aa, and to Rhizobium meliloti NADPH dehydrogenase quinone reductase transmembrane protein r02916 or smc03185 SWALL:Q92LV5 (EMBL:AL591792) (270 aa) fasta scores: E(): 4.7e-65, 58.52% id in 258 aa; dehydrogenase 252651..253427 Burkholderia pseudomallei K96243 3095845 YP_110210.1 CDS BPSS0190 NC_006351.1 254427 255722 R Similar to Bacillus halodurans O-acetylhomoserine sulfhydrylase bh2603 SWALL:Q9K9P2 (EMBL:AP001516) (430 aa) fasta scores: E(): 7.2e-95, 60.71% id in 420 aa, and to the full length of the eukaryotic Emericella nidulans O-acetylhomoserine CysD SWALL:CYSD_EMENI (SWALL:P50125) (437 aa) fasta scores: E(): 1.6e-83, 51.16% id in 430 aa; O-acetylhomoserine complement(254427..255722) Burkholderia pseudomallei K96243 3096143 YP_110211.1 CDS BPSS0191 NC_006351.1 256006 256398 R Similar to Ralstonia solanacearum hypothetical protein rsc2017 or rs03585 SWALL:Q8XXU6 (EMBL:AL646067) (134 aa) fasta scores: E(): 3.9e-05, 33.61% id in 119 aa, and to Caulobacter crescentus hypothetical protein cc2962 SWALL:Q9A481 (EMBL:AE005960) (121 aa) fasta scores: E(): 4.2e-05, 30.64% id in 124 aa; dioxygenase complement(256006..256398) Burkholderia pseudomallei K96243 3096446 YP_110212.1 CDS BPSS0192 NC_006351.1 256752 257597 R hypothetical protein complement(256752..257597) Burkholderia pseudomallei K96243 3096447 YP_110213.1 CDS BPSS0193 NC_006351.1 258412 259767 R hypothetical protein complement(258412..259767) Burkholderia pseudomallei K96243 3096290 YP_110214.1 CDS BPSS0194 NC_006351.1 259954 260958 R Similar to Pseudomonas aeruginosa hypothetical protein pa0496 SWALL:Q9I622 (EMBL:AE004486) (325 aa) fasta scores: E(): 4.1e-81, 65.2% id in 319 aa, and similar to parts of Pseudomonas fluorescens urea amidolyase homologue UahA SWALL:Q9XAV3 (EMBL:AJ243652) (1213 aa) fasta scores: E(): 2.4e-34, 42.76% id in 311 aa; hypothetical protein complement(259954..260958) Burkholderia pseudomallei K96243 3095785 YP_110215.1 CDS BPSS0195 NC_006351.1 260948 261823 R Similar to Pseudomonas aeruginosa hypothetical protein pa0495 SWALL:Q9I623 (EMBL:AE004486) (292 aa) fasta scores: E(): 5.2e-84, 69.55% id in 289 aa, and to parts of Pseudomonas fluorescens urea amidolyase homologue UahA SWALL:Q9XAV3 (EMBL:AJ243652) (1213 aa) fasta scores: E(): 4.9e-13, 26.18% id in 275 aa; hypothetical protein complement(260948..261823) Burkholderia pseudomallei K96243 3095786 YP_110216.1 CDS accC NC_006351.1 261820 263265 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(261820..263265) Burkholderia pseudomallei K96243 3095233 YP_110217.1 CDS BPSS0197 NC_006351.1 263271 263537 R Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism; hypothetical protein complement(263271..263537) Burkholderia pseudomallei K96243 3096135 YP_110218.1 CDS BPSS0198 NC_006351.1 263527 264327 R Similar to Pseudomonas aeruginosa hypothetical protein pa0492 SWALL:Q9I626 (EMBL:AE004486) (252 aa) fasta scores: E(): 7.9e-69, 72.58% id in 248 aa, and to Escherichia coli protein YbgL or b0713 SWALL:YBGL_ECOLI (SWALL:P75746) (244 aa) fasta scores: E(): 8.5e-28, 38.55% id in 249 aa; hypothetical protein complement(263527..264327) Burkholderia pseudomallei K96243 3096371 YP_110219.1 CDS BPSS0199 NC_006351.1 264595 265509 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hydrogen peroxide-inducible genes activator OxyR or MomR or Mor or b3961 or c4922 or z5519 or ecs4890 SWALL:OXYR_ECOLI (SWALL:P11721) (305 aa) fasta scores: E(): 1.2e-18, 30.5% id in 295 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0491 SWALL:Q9I627 (EMBL:AE004486) (308 aa) fasta scores: E(): 1.8e-73, 64.21% id in 299 aa; LysR family transcriptional regulator 264595..265509 Burkholderia pseudomallei K96243 3096372 YP_110220.1 CDS BPSS0200 NC_006351.1 266228 268741 D Similar to Brucella abortus penicillin acylase II batn1953.orf25 SWALL:Q8VQK2 (EMBL:AF454951) (761 aa) fasta scores: E(): 6e-37, 29.86% id in 817 aa, and to Arthrobacter viscosus penicillin G acylase precursor Pac or Pa SWALL:PAC_ARTVI (SWALL:P31956) (802 aa) fasta scores: E(): 1.3e-33, 27.75% id in 544 aa; penicillin amidase 266228..268741 Burkholderia pseudomallei K96243 3095645 YP_110221.1 CDS pip NC_006351.1 269128 270066 D Similar to Serratia marcescens proline iminopeptidase Pip SWALL:PIP_SERMA (SWALL:O32449) (317 aa) fasta scores: E(): 4.7e-86, 66.77% id in 310 aa, and to Ralstonia solanacearum probable prolyl aminopeptidase rsp0196 or rs04709 SWALL:Q8XTB7 (EMBL:AL646077) (320 aa) fasta scores: E(): 4.9e-88, 68.6% id in 309 aa; prolyl iminopeptidase 269128..270066 Burkholderia pseudomallei K96243 3095394 YP_110222.1 CDS BPSS0202 NC_006351.1 270241 271134 D Very low similarities to parts of Mycobacterium tuberculosis hypothetical 37.9 kDa protein rv1523 or mt1574 or mtcy19g5.05C SWALL:Q50584 (EMBL:Z77826) (347 aa) fasta scores: E(): 9.2e-06, 35.03% id in 137 aa, and to Pseudomonas aeruginosa hypothetical protein pa2650 SWALL:Q9I0I8 (EMBL:AE004694) (269 aa) fasta scores: E(): 5.8e-05, 34.07% id in 135 aa; hypothetical protein 270241..271134 Burkholderia pseudomallei K96243 3096621 YP_110223.1 CDS BPSS0203 NC_006351.1 271227 273239 R lipoprotein complement(271227..273239) Burkholderia pseudomallei K96243 3096622 YP_110224.1 CDS tsr NC_006351.1 274149 275777 R Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 7.7e-55, 47.52% id in 484 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis transmembrane protein rsc1234 or rs02741 SWALL:Q8Y011 (EMBL:AL646063) (514 aa) fasta scores: E(): 1.4e-100, 65.1% id in 513 aa; methyl-accepting chemotaxis protein I complement(274149..275777) Burkholderia pseudomallei K96243 3095098 YP_110225.1 CDS prpR NC_006351.1 276127 278211 R Similar to Burkholderia sacchari PrpR SWALL:Q8VPT1 (EMBL:AY033092) (646 aa) fasta scores: E(): 3.9e-121, 60.78% id in 663 aa, and to Escherichia coli propionate catabolism operon regulatory protein PrpR or b0330 SWALL:PRPR_ECOLI (SWALL:P77743) (528 aa) fasta scores: E(): 3e-41, 36.99% id in 673 aa. CDS is extended at the C-terminus in comparison to orthologues; sigma interaction transcriptional regulator complement(276127..278211) Burkholderia pseudomallei K96243 3095843 YP_110226.1 CDS prpB NC_006351.1 278428 279321 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 278428..279321 Burkholderia pseudomallei K96243 3095582 YP_110227.1 CDS prpC NC_006351.1 279370 280542 D catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 279370..280542 Burkholderia pseudomallei K96243 3095583 YP_110228.1 CDS acnA NC_006351.1 280616 283210 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 280616..283210 Burkholderia pseudomallei K96243 3095728 YP_110229.1 CDS BPSS0209 NC_006351.1 283368 284558 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp0119 or rs03003 SWALL:Q8XTI9 (EMBL:AL646076) (396 aa) fasta scores: E(): 2.8e-129, 88.07% id in 394 aa, and to Burkholderia sacchari hypothetical 41.4 kDa protein SWALL:Q8VPS6 (EMBL:AY033092) (396 aa) fasta scores: E(): 4.9e-128, 86.36% id in 396 aa; hypothetical protein 283368..284558 Burkholderia pseudomallei K96243 3096880 YP_110230.1 CDS BPSS0210 NC_006351.1 284611 285054 R Similar to Deinococcus radiodurans hypothetical protein dra0198 SWALL:Q9RYV8 (EMBL:AE001862) (164 aa) fasta scores: E(): 7.4e-21, 45.73% id in 129 aa, and to Rhizobium loti hypothetical protein mlr6946 SWALL:Q987R7 (EMBL:AP003010) (171 aa) fasta scores: E(): 1.4e-06, 32.39% id in 142 aa; hypothetical protein complement(284611..285054) Burkholderia pseudomallei K96243 3095993 YP_110231.1 CDS BPSS0211 NC_006351.1 286130 286321 D Similar to Ralstonia solanacearum hypothetical protein rsc1725 or rs02913 SWALL:Q8XYN3 (EMBL:AL646066) (63 aa) fasta scores: E(): 2.2e-08, 62.26% id in 53 aa, and to the C-terminal region of Ralstonia solanacearum hypothetical protein rsc1727 or rs02915 SWALL:Q8XYN1 (EMBL:AL646066) (193 aa) fasta scores: E(): 0.00076, 45.9% id in 61 aa; hypothetical protein 286130..286321 Burkholderia pseudomallei K96243 3095994 YP_110232.1 CDS BPSS0212 NC_006351.1 286414 287052 D Similar to Ralstonia solanacearum hypothetical protein rsc1726 or rs02914 SWALL:Q8XYN2 (EMBL:AL646066) (208 aa) fasta scores: E(): 6.3e-40, 54.71% id in 212 aa, and to Ralstonia solanacearum hypothetical protein rsc1727 or rs02915 SWALL:Q8XYN1 (EMBL:AL646066) (193 aa) fasta scores: E(): 3.2e-13, 39.61% id in 207 aa; hypothetical protein 286414..287052 Burkholderia pseudomallei K96243 3096247 YP_110233.1 CDS BPSS0213 NC_006351.1 287105 287695 D Similar to Ralstonia solanacearum hypothetical protein rsc1727 or rs02915 SWALL:Q8XYN1 (EMBL:AL646066) (193 aa) fasta scores: E(): 2.1e-33, 51.79% id in 195 aa, and to Ralstonia solanacearum hypothetical protein rsc1726 or rs02914 SWALL:Q8XYN2 (EMBL:AL646066) (208 aa) fasta scores: E(): 1.3e-12, 36.94% id in 203 aa; hypothetical protein 287105..287695 Burkholderia pseudomallei K96243 3096906 YP_110234.1 CDS BPSS0214 NC_006351.1 287774 289249 D Similar to Ralstonia solanacearum hypothetical protein rsc1728 or rs02916 SWALL:Q8XYN0 (EMBL:AL646066) (491 aa) fasta scores: E(): 3.8e-168, 84.45% id in 489 aa, and to Pyrobaculum aerophilum metallo cofactor biosynthesis protein pae0579 SWALL:Q8ZYW8 (EMBL:AE009774) (384 aa) fasta scores: E(): 1.7e-19, 28.45% id in 369 aa; heme/metallo cofactor biosynthesis-like protein 287774..289249 Burkholderia pseudomallei K96243 3096907 YP_110235.1 CDS tar NC_006351.1 289471 291084 D Similar to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM or stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 9.9e-67, 47.81% id in 525 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 4e-63, 44.93% id in 523 aa; methyl-accepting chemotaxis protein 289471..291084 Burkholderia pseudomallei K96243 3096604 YP_110236.1 CDS BPSS0216 NC_006351.1 291447 293084 R Similar to Rhizobium loti transmembrane efflux protein mll5686 SWALL:Q98B85 (EMBL:AP003007) (502 aa) fasta scores: E(): 3.1e-40, 32.99% id in 491 aa, and to Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 1.7e-37, 31.08% id in 518 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein complement(291447..293084) Burkholderia pseudomallei K96243 3096037 YP_110237.1 CDS BPSS0217 NC_006351.1 293213 294070 D Similar to Agrobacterium tumefaciens transcriptional regulator, LysR family atu4021 or agr_l_1663 SWALL:Q8U8R9 (EMBL:AE009333) (309 aa) fasta scores: E(): 2.6e-32, 37.2% id in 293 aa, and to Yersinia pestis probable LysR-family transcriptional regulator ypo1929 SWALL:Q8ZF22 (EMBL:AJ414150) (292 aa) fasta scores: E(): 1.6e-23, 31.59% id in 288 aa; LysR family transcriptional regulator 293213..294070 Burkholderia pseudomallei K96243 3096243 YP_110238.1 CDS BPSS0218 NC_006351.1 294153 295256 R Similar to Ralstonia solanacearum probable mannose-6-phosphate isomerase ManA or rsc3058 or rs00502 SWALL:Q8XUX5 (EMBL:AL646073) (410 aa) fasta scores: E(): 1.6e-39, 43.22% id in 391 aa, and to Rhizobium meliloti mannose-6-phosphate isomerase Pmi or r02982 or smc03111 SWALL:MANA_RHIME (SWALL:P29954) (387 aa) fasta scores: E(): 9.4e-06, 28.75% id in 386 aa; isomerase complement(294153..295256) Burkholderia pseudomallei K96243 3096244 YP_110239.1 CDS BPSS0219 NC_006351.1 295367 296062 D Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YhiD or b3508 or z4920 or ecs4388 SWALL:YHID_ECOLI (SWALL:P26606) (215 aa) fasta scores: E(): 1.1e-24, 40.55% id in 217 aa, and to Aquifex aeolicus Mg(2+) transport ATPase MgtC or aq_447 SWALL:O66755 (EMBL:AE000690) (225 aa) fasta scores: E(): 6.8e-20, 39.3% id in 201 aa; MgtC family membrane protein 295367..296062 Burkholderia pseudomallei K96243 3096098 YP_110240.1 CDS BPSS0220 NC_006351.1 296382 297662 D No significant database matches. Possible alternative translational start site; hypothetical protein 296382..297662 Burkholderia pseudomallei K96243 3096180 YP_110241.1 CDS BPSS0221A NC_006351.1 297814 298842 R Doubtful CDS. Poor database matches. Weakly similar to the N-terminal region of Mycobacterium paratuberculosis FtsQ ftsQ SWALL:Q73YR0 (EMBL:AE017233) (375 aa) fasta scores: E(): 0.00018, 31.51% id in 330 aa; hypothetical protein complement(297814..298842) Burkholderia pseudomallei K96243 3096181 YP_110242.1 CDS BPSS0222 NC_006351.1 299030 299500 D Similar to Listeria monocytogenes hypothetical protein lmo0624 SWALL:Q8Y9A8 (EMBL:AL591976) (147 aa) fasta scores: E(): 2.4e-12, 32.43% id in 148 aa, and to Bacillus subtilis YycN protein SWALL:O32293 (EMBL:Z99124) (156 aa) fasta scores: E(): 1.9e-11, 30.71% id in 153 aa; acetyltransferase 299030..299500 Burkholderia pseudomallei K96243 3097175 YP_110243.1 CDS BPSS0223 NC_006351.1 299703 300371 R hypothetical protein complement(299703..300371) Burkholderia pseudomallei K96243 3096389 YP_110244.1 CDS BPSS0224 NC_006351.1 300572 303502 R No significant database matches to the full length CDS. N-terminal region is similar to Similar to Homo sapiens copper-transporting ATPase 2 ATP7B or WND or PWD or WC1 SWALL:AT7B_HUMAN (SWALL:P35670) (1465 aa) fasta scores: E(): 3e-07, 27% id in 300 aa. C-terminal region is similar to Ralstonia solanacearum probable cation-transporting ATPase transmembrane protein rsc3348 or rs02623 SWALL:Q8XU45 (EMBL:AL646074) (748 aa) fasta scores: E(): 1.1e-121, 59.89% id in 768 aa, and to Synechocystis sp. cation-transporting ATPase PacS or sll1920 SWALL:ATCS_SYNY3 (SWALL:P73241) (745 aa) fasta scores: E(): 2.8e-81, 44.01% id in 777 aa; cation-transporting ATPase membrane protein complement(300572..303502) Burkholderia pseudomallei K96243 3096390 YP_110245.1 CDS BPSS0225 NC_006351.1 304350 305177 D hypothetical protein 304350..305177 Burkholderia pseudomallei K96243 3096836 YP_110246.1 CDS BPSS0226 NC_006351.1 305951 307372 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0254 or rs00689 SWALL:Q8Y2T1 (EMBL:AL646058) (542 aa) fasta scores: E(): 1.1e-24, 34.67% id in 522 aa, and to Listeria monocytogenes hypothetical protein lmo0525 SWALL:Q8Y9K2 (EMBL:AL591975) (443 aa) fasta scores: E(): 8.1e-18, 28.17% id in 465 aa; lipoprotein 305951..307372 Burkholderia pseudomallei K96243 3096089 YP_110247.1 CDS BPSS0227 NC_006351.1 307527 311486 D Similar to Ralstonia solanacearum transmembrane protein rsc0896 or rs06183 SWALL:Q8Y0Z7 (EMBL:AL646061) (1261 aa) fasta scores: E(): 8e-67, 44.29% id in 1314 aa, and to Pseudomonas aeruginosa hypothetical protein pa4735 SWALL:Q9HV64 (EMBL:AE004887) (1088 aa) fasta scores: E(): 1.9e-29, 24.82% id in 1305 aa; hypothetical protein 307527..311486 Burkholderia pseudomallei K96243 3096090 YP_110248.1 CDS BPSS0228 NC_006351.1 311611 311874 R hypothetical protein complement(311611..311874) Burkholderia pseudomallei K96243 3096164 YP_110249.1 CDS BPSS0229 NC_006351.1 312200 313861 R Similar to Rhizobium loti hypothetical protein mlr2187 SWALL:Q98IY7 (EMBL:AP002999) (508 aa) fasta scores: E(): 1.1e-53, 43.19% id in 551 aa; hypothetical protein complement(312200..313861) Burkholderia pseudomallei K96243 3096456 YP_110250.1 CDS BPSS0230 NC_006351.1 314442 314834 R Similar to Photorhabdus luminescens ORF38 SWALL:AAO18063 (EMBL:AY144116) (131 aa) fasta scores: E(): 1.7e-23, 47.61% id in 126 aa, and to Bacillus subtilis hypothetical protein YycE SWALL:YYCE_BACSU (SWALL:P37479) (139 aa) fasta scores: E(): 1.1e-16, 38.52% id in 122 aa; glyoxalase/bleomycin resistance protein/dioxygenase complement(314442..314834) Burkholderia pseudomallei K96243 3096457 YP_110251.1 CDS BPSS0231 NC_006351.1 314959 315243 R Similar to the N-terminal region of Ralstonia solanacearum hypothetical protein RSP1103 or RS02609 SWALL:Q8XQW5 (EMBL:AL646082) (56 aa) fasta scores: E(): 2, 45.65% id in 46 aa; hypothetical protein complement(314959..315243) Burkholderia pseudomallei K96243 3095687 YP_110252.1 CDS BPSS0232 NC_006351.1 315412 316482 D Similar to Methylococcus capsulatus squalene synthase Sqs SWALL:O69445 (EMBL:Y09978) (362 aa) fasta scores: E(): 8.3e-20, 29.1% id in 323 aa; squalene/phytoene synthase 315412..316482 Burkholderia pseudomallei K96243 3096335 YP_110253.1 CDS BPSS0234 NC_006351.1 318009 319016 R Similar to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioB or pa3929 SWALL:O07441 (EMBL:Y10528) (335 aa) fasta scores: E(): 3.3e-78, 60.59% id in 335 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 cytochrome D ubiquinol oxidase subunit II CydB or Cyd-2 or b0734 or c0812 or z0901 or ecs0769 SWALL:CYDB_ECOLI (SWALL:P11027) (379 aa) fasta scores: E(): 1.3e-21, 28.22% id in 372 aa; cytochrome oxidase subunit II complement(318009..319016) Burkholderia pseudomallei K96243 3095984 YP_110254.1 CDS BPSS0235 NC_006351.1 319052 320464 R Similar to Salmonella typhimurium cytochrome BD2 subunit I stm0360 SWALL:Q8ZRG3 (EMBL:AE008712) (467 aa) fasta scores: E(): 1e-118, 65.73% id in 467 aa, and to Escherichia coli, and Escherichia coli O6 cytochrome D ubiquinol oxidase subunit I CydA or Cyd-1 or b0733 or c0811 SWALL:CYDA_ECOLI (SWALL:P11026) (522 aa) fasta scores: E(): 2.4e-39, 31.67% id in 502 aa; cytochrome oxidase subunit I complement(319052..320464) Burkholderia pseudomallei K96243 3095529 YP_110255.1 CDS ltaE NC_006351.1 321065 322078 D Similar to Escherichia coli low-specificity L-threonine aldolase LtaE or b0870 SWALL:LTAE_ECOLI (SWALL:P75823) (333 aa) fasta scores: E(): 1.4e-68, 58.98% id in 334 aa, and to Salmonella typhimurium LT2 L-allo-threonine aldolase LtaA SWALL:Q8ZQF1 (EMBL:AE008737) (333 aa) fasta scores: E(): 1.3e-70, 61.07% id in 334 aa; L-allo-threonine aldolase 321065..322078 Burkholderia pseudomallei K96243 3097028 YP_110256.1 CDS BPSS0237 NC_006351.1 322047 323024 R specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein complement(322047..323024) Burkholderia pseudomallei K96243 3095530 YP_110257.1 CDS BPSS0238 NC_006351.1 323180 325342 D Similar to Bacillus subtilis penicillin-binding protein 1A/1B PonA SWALL:PBPA_BACSU (SWALL:P39793) (914 aa) fasta scores: E(): 8.7e-44, 30.94% id in 685 aa, and to Escherichia coli penicillin-binding protein 1B MrcB or PonB or PbpF or b0149 SWALL:PBPB_ECOLI (SWALL:P02919) (844 aa) fasta scores: E(): 9.3e-43, 31.98% id in 591 aa; penicillin-binding protein 323180..325342 Burkholderia pseudomallei K96243 3095959 YP_110258.1 CDS BPSS0239 NC_006351.1 325355 325963 D Similar to Escherichia coli, and Escherichia coli O6 hypothetical protein YicG or b3646 or c4470 SWALL:YICG_ECOLI (SWALL:P31432) (205 aa) fasta scores: E(): 5.6e-29, 42.57% id in 202 aa, and to Vibrio cholerae hypothetical protein Vc2115 vc2115 SWALL:Q9KQ86 (EMBL:AE004285) (207 aa) fasta scores: E(): 1.2e-32, 51.77% id in 197 aa; hypothetical protein 325355..325963 Burkholderia pseudomallei K96243 3096136 YP_110259.1 CDS hmuV NC_006351.1 326012 326830 R with HmuTU is involved in the import of hemin; hemin importer ATP-binding subunit complement(326012..326830) Burkholderia pseudomallei K96243 3096137 YP_110260.1 CDS BPSS0241 NC_006351.1 327285 328406 R Similar to Yersinia pestis hemin transport system permease HmuU or ypo0280 or y0540 SWALL:HMUU_YERPE (SWALL:Q56992) (334 aa) fasta scores: E(): 2.6e-43, 45.48% id in 343 aa, and to Bordetella avium BhuU SWALL:Q8L1U4 (EMBL:AY095952) (334 aa) fasta scores: E(): 9.1e-45, 49.41% id in 344 aa; hemin ABC transporter membrane protein complement(327285..328406) Burkholderia pseudomallei K96243 3096191 YP_110261.1 CDS BPSS0242 NC_006351.1 328774 329700 R Similar to Yersinia pestis hemin-binding periplasmic protein precursor HmuT or ypo0281 or y0541 SWALL:HMUT_YERPE (SWALL:Q56991) (279 aa) fasta scores: E(): 2.7e-17, 41.72% id in 266 aa, and to Escherichia coli O157:H7 periplasmic binding protein ChuT or z4913 or ecs4382 SWALL:Q8X5N7 (EMBL:AE005576) (304 aa) fasta scores: E(): 8.4e-22, 32.97% id in 276 aa; hemin transport system, substrate-binding protein complement(328774..329700) Burkholderia pseudomallei K96243 3094999 YP_110262.1 CDS BPSS0243 NC_006351.1 329697 330848 R Similar to Yersinia pestis hemin transport protein HmuS or ypo0282 or y0542 SWALL:HMUS_YERPE (SWALL:Q56990) (345 aa) fasta scores: E(): 1.8e-45, 42.2% id in 327 aa, and to Ralstonia solanacearum probable hemin transport protein rsp0243 or rs03723 SWALL:Q8XT72 (EMBL:AL646077) (380 aa) fasta scores: E(): 3.5e-70, 56.7% id in 358 aa; hemin ABC transport system-related protein complement(329697..330848) Burkholderia pseudomallei K96243 3095000 YP_110263.1 CDS BPSS0244 NC_006351.1 330905 333184 R Similar to Caulobacter crescentus TonB-dependent receptor cc2194 SWALL:Q9A6A0 (EMBL:AE005891) (733 aa) fasta scores: E(): 4.5e-100, 41.94% id in 739 aa, and to Vibrio mimicus heme receptor precursor MhuA SWALL:Q9AQK5 (EMBL:AB048382) (710 aa) fasta scores: E(): 1.9e-33, 29.43% id in 727 aa; exported heme receptor protein complement(330905..333184) Burkholderia pseudomallei K96243 3096221 YP_110264.1 CDS BPSS0245 NC_006351.1 333659 333886 R hypothetical protein complement(333659..333886) Burkholderia pseudomallei K96243 3096316 YP_110265.1 CDS BPSS0246 NC_006351.1 334048 334944 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 7.3e-26, 32.88% id in 298 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0448 SWALL:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 2.3e-33, 37.07% id in 294 aa; LysR family transcriptional regulator complement(334048..334944) Burkholderia pseudomallei K96243 3096317 YP_110266.1 CDS BPSS0247 NC_006351.1 335111 335959 D Similar to Pseudomonas aeruginosa probable permease of ABC transporter pa3253 SWALL:Q9HYY7 (EMBL:AE004747) (265 aa) fasta scores: E(): 2.2e-19, 29.32% id in 266 aa, and to Ralstonia solanacearum probable permease transmembrane ABC transporter protein rsc1793 or rs04192 SWALL:Q8XYG5 (EMBL:AL646066) (265 aa) fasta scores: E(): 1e-14, 28.15% id in 238 aa; ABC transporter membrane protein 335111..335959 Burkholderia pseudomallei K96243 3096126 YP_110267.1 CDS BPSS0248 NC_006351.1 335964 337007 D Similar to Rhizobium loti ABC transporter ATP-binding protein mll2948 SWALL:Q98HB1 (EMBL:AP003000) (371 aa) fasta scores: E(): 8.1e-41, 43.31% id in 314 aa, and to Alicyclobacillus acidocaldarius ABC-transporter ATP-binding protein CysA SWALL:Q9RHZ7 (EMBL:AJ252160) (393 aa) fasta scores: E(): 1.4e-37, 46.1% id in 295 aa; ABC transporter ATP-binding protein 335964..337007 Burkholderia pseudomallei K96243 3096305 YP_110268.1 CDS BPSS0249 NC_006351.1 337034 338122 D Similar to Ralstonia solanacearum probable solute-binding periplasmic rsc1791 or rs04190 SWALL:Q8XYG7 (EMBL:AL646066) (343 aa) fasta scores: E(): 1.5e-37, 37.27% id in 330 aa, and to Campylobacter jejuni periplasmic solute-binding protein cj0727 SWALL:Q9PPI0 (EMBL:AL139076) (348 aa) fasta scores: E(): 8.9e-28, 31.05% id in 351 aa; ABC transport system, substrate-binding exported protein 337034..338122 Burkholderia pseudomallei K96243 3096306 YP_110269.1 CDS BPSS0250 NC_006351.1 338112 338960 D Similar to Ralstonia solanacearum probable transport system permease transmembrane ABC transporter protein rsc1792 or rs04191 SWALL:Q8XYG6 (EMBL:AL646066) (282 aa) fasta scores: E(): 4.9e-17, 35.03% id in 254 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu2148 or agr_c_3892 SWALL:Q8UDH7 (EMBL:AE009165) (331 aa) fasta scores: E(): 3.4e-15, 31.53% id in 260 aa; ABC transporter membrane protein 338112..338960 Burkholderia pseudomallei K96243 3096147 YP_110270.1 CDS BPSS0251 NC_006351.1 338974 339486 D C-terminal region is similar to Methanosarcina mazei hypothetical protein mm3075 SWALL:Q8PSK4 (EMBL:AE013563) (156 aa) fasta scores: E(): 3.9e-14, 43.38% id in 136 aa, and Aquifex pyrophilus hypothetical protein SWALL:AAN12294 (EMBL:AY135660) (150 aa) fasta scores: E(): 1.4e-12, 38.62% id in 145 aa. Possible alternative start codon at codon 20; lysine decarboxylase 338974..339486 Burkholderia pseudomallei K96243 3095080 YP_110271.1 CDS BPSS0252 NC_006351.1 339553 340752 D Similar to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 3.1e-44, 43.06% id in 404 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.1e-20, 34.18% id in 392 aa; porin 339553..340752 Burkholderia pseudomallei K96243 3095081 YP_110272.1 CDS BPSS0253 NC_006351.1 340812 341774 R Similar to Pasteurella multocida hypothetical protein pm1646 SWALL:Q9CKH2 (EMBL:AE006201) (317 aa) fasta scores: E(): 1.2e-59, 52.68% id in 317 aa, and to Bacillus halodurans transcriptional regulator bh0780 SWALL:Q9KER9 (EMBL:AP001509) (316 aa) fasta scores: E(): 1.7e-24, 29.83% id in 305 aa; DNA-binding protein complement(340812..341774) Burkholderia pseudomallei K96243 3096423 YP_110273.1 CDS BPSS0254 NC_006351.1 341809 342303 R Similar to Escherichia coli ribose 5-phosphate isomerase B RpiB or b4090 SWALL:RPIB_ECOLI (SWALL:P37351) (149 aa) fasta scores: E(): 5.9e-21, 46.62% id in 148 aa, and to Yersinia pestis ribose 5-phosphate isomerase B RpiB or ypo3353 or y0837 SWALL:AAM84422 (EMBL:AJ414156) (151 aa) fasta scores: E(): 1.7e-28, 55.4% id in 148 aa; ribose 5-phosphate isomerase complement(341809..342303) Burkholderia pseudomallei K96243 3096194 YP_110274.1 CDS BPSS0255 NC_006351.1 342542 344059 D Similar to Escherichia coli ribose transport ATP-binding protein RbsA or b3749 SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 2.6e-60, 40.89% id in 494 aa, and to Yersinia pestis sugar transport ATP-binding protein ypo0858 SWALL:Q8ZHN2 (EMBL:AJ414145) (502 aa) fasta scores: E(): 1.6e-74, 48.77% id in 490 aa; ribose ABC transporter ATP-binding protein 342542..344059 Burkholderia pseudomallei K96243 3096195 YP_110275.1 CDS rbsC NC_006351.1 344068 345045 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribose transport system permease RbsC or b3750 or c4678 or z5251 or ecs4692 SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 1.3e-45, 53.31% id in 302 aa, and to Salmonella typhimurium, and Salmonella typhi ABC superfamily stm3883 or sty3895 SWALL:Q8XFM3 (EMBL:AE008881) (321 aa) fasta scores: E(): 5.1e-46, 53.97% id in 302 aa; ribose ABC transporter permease 344068..345045 Burkholderia pseudomallei K96243 3095953 YP_110276.1 CDS BPSS0257 NC_006351.1 345077 346105 D Similar to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB or b3751 SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 4.1e-13, 28.18% id in 298 aa, and to Brucella melitensis D-ribose-binding periplasmic protein precursor bmei0393 SWALL:Q8YIQ0 (EMBL:AE009482) (325 aa) fasta scores: E(): 6.3e-54, 51.09% id in 321 aa; ribose ABC transport system, substrate-binding exported protein 345077..346105 Burkholderia pseudomallei K96243 3096719 YP_110277.1 CDS BPSS0258 NC_006351.1 346117 346887 D Similar to Escherichia coli 2-deoxy-D-gluconate 3-dehydrogenase KduD or b2842 SWALL:KDUD_ECOLI (SWALL:P37769) (253 aa) fasta scores: E(): 9.3e-24, 37.45% id in 251 aa, and to Yersinia pestis dehydrogenase ypo3351 or y0839 SWALL:Q8ZBQ6 (EMBL:AJ414156) (256 aa) fasta scores: E(): 1.7e-39, 52.17% id in 253 aa; short chain dehydrogenase 346117..346887 Burkholderia pseudomallei K96243 3095743 YP_110278.1 CDS BPSS0259 NC_006351.1 346953 348089 D Similar to Pseudomonas putida 2,3-butanediol dehydrogenase Adh SWALL:Q59696 (EMBL:L35343) (362 aa) fasta scores: E(): 2.8e-32, 32.12% id in 358 aa, and to Yersinia pestis zinc-binding dehydrogenase ypo3352 SWALL:Q8ZBQ5 (EMBL:AJ414156) (371 aa) fasta scores: E(): 7.9e-88, 61.51% id in 356 aa; dehydrogenase 346953..348089 Burkholderia pseudomallei K96243 3095744 YP_110279.1 CDS BPSS0260 NC_006351.1 348094 349098 D Similar to Yersinia pestis dihydroxyacetone kinase DhaK or ypo3350 SWALL:Q8ZBQ7 (EMBL:AJ414156) (333 aa) fasta scores: E(): 2.1e-72, 62.72% id in 330 aa, and to Selenomonas ruminantium subsp. ruminantium dihydroxyacetone kinase DhaK1 SWALL:Q93PV9 (EMBL:AF297121) (329 aa) fasta scores: E(): 2.6e-45, 43.3% id in 321 aa; kinase 348094..349098 Burkholderia pseudomallei K96243 3096174 YP_110280.1 CDS BPSS0261 NC_006351.1 349095 349754 D Similar to the plasmid-borne Rhizobium meliloti dihydroxyacetone kinase rb0299 or smb20313 SWALL:Q92WN3 (EMBL:AL603643) (213 aa) fasta scores: E(): 5.6e-36, 54.93% id in 213 aa, and to Selenomonas ruminantium subsp. ruminantium dihydroxyacetone kinase DhaK2 SWALL:Q9F677 (EMBL:AF297121) (207 aa) fasta scores: E(): 1.2e-19, 37.18% id in 199 aa; kinase 349095..349754 Burkholderia pseudomallei K96243 3096124 YP_110281.1 CDS BPSS0262 NC_006351.1 349788 350261 R Similar to Salmonella typhi aminoglycoside 6'-N-acetyltransferase Aac or sty1445 SWALL:Q8Z762 (EMBL:AL627270) (172 aa) fasta scores: E(): 4.6e-23, 49.65% id in 145 aa, and to Enterobacter aerogenes aminoglycoside N AacA7 SWALL:AAC6_ENTAE (SWALL:P50858) (152 aa) fasta scores: E(): 9.3e-17, 43.91% id in 148 aa; aminoglycoside 6'-N-acetyltransferase complement(349788..350261) Burkholderia pseudomallei K96243 3096125 YP_110282.1 CDS BPSS0263 NC_006351.1 350258 350713 R hypothetical protein complement(350258..350713) Burkholderia pseudomallei K96243 3096310 YP_110283.1 CDS BPSS0264 NC_006351.1 351133 351393 R hypothetical protein complement(351133..351393) Burkholderia pseudomallei K96243 3096122 YP_110284.1 CDS BPSS0265 NC_006351.1 351601 352749 R Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.1e-21, 33.58% id in 405 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 1.6e-34, 39.75% id in 405 aa; porin-related protein complement(351601..352749) Burkholderia pseudomallei K96243 3096123 YP_110285.1 CDS BPSS0266 NC_006351.1 353062 353862 D Similar to Ralstonia solanacearum probable signal peptide protein rsc0922 or rs04493 SWALL:Q8Y0X1 (EMBL:AL646061) (266 aa) fasta scores: E(): 4.7e-57, 62.54% id in 259 aa, and to Brucella melitensis ABC transporter substrate binding protein bmei1954 SWALL:Q8YEC4 (EMBL:AE009628) (268 aa) fasta scores: E(): 7.2e-42, 46% id in 263 aa; hypothetical protein 353062..353862 Burkholderia pseudomallei K96243 3095082 YP_110286.1 CDS BPSS0267 NC_006351.1 354335 355450 R Similar to Pseudomonas aeruginosa arginine/ornithine transport operon protein Aot AotO or pa0891 SWALL:O50184 (EMBL:AF012537) (370 aa) fasta scores: E(): 1.3e-51, 43.39% id in 371 aa, and to Rhizobium loti hypothetical protein mlr2771 SWALL:Q98HP7 (EMBL:AP003000) (351 aa) fasta scores: E(): 1.3e-09, 30.34% id in 379 aa; hypothetical protein complement(354335..355450) Burkholderia pseudomallei K96243 3096044 YP_110287.1 CDS BPSS0268 NC_006351.1 355722 357836 D Similar to Rhizobium loti O-antigen acetylase mlr0695 SWALL:Q98M77 (EMBL:AP002995) (688 aa) fasta scores: E(): 1.3e-66, 42.93% id in 694 aa, and to Pseudomonas aeruginosa probable O-antigen acetylase pa5238 SWALL:Q9HTV2 (EMBL:AE004936) (662 aa) fasta scores: E(): 6e-32, 31.62% id in 702 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site; O-antigen acetylase 355722..357836 Burkholderia pseudomallei K96243 3096045 YP_110288.1 CDS BPSS0268A NC_006351.1 357861 357995 D hypothetical protein 357861..357995 Burkholderia pseudomallei K96243 3096303 YP_110289.1 CDS argT NC_006351.1 358089 358871 R Similar to Escherichia coli lysine-arginine-ornithine-binding periplasmic protein precursor ArgT or b2310 SWALL:ARGT_ECOLI (SWALL:P09551) (260 aa) fasta scores: E(): 2.6e-52, 53.66% id in 259 aa, and histidine-binding periplasmic protein precursor HisJ or b2309 or c2851 or z3571 or ecs3193 SWALL:HISJ_ECOLI (SWALL:P39182) (260 aa) fasta scores: E(): 3.5e-52, 52.51% id in 259 aa; lysine-arginine-ornithine transport system, binding exported protein complement(358089..358871) Burkholderia pseudomallei K96243 3095641 YP_110290.1 CDS BPSS0270 NC_006351.1 359105 360004 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2921 SWALL:Q9HZS6 (EMBL:AE004718) (329 aa) fasta scores: E(): 2.7e-26, 37% id in 300 aa, and to Escherichia coli transcriptional regulator AbgR or b1339 SWALL:ABGR_ECOLI (SWALL:P77744) (302 aa) fasta scores: E(): 2e-21, 29.96% id in 297 aa; LysR family transcriptional regulator complement(359105..360004) Burkholderia pseudomallei K96243 3096347 YP_110291.1 CDS BPSS0271 NC_006351.1 360140 361327 D Similar to Campylobacter jejuni hippurate hydrolase HipO or cj0985C SWALL:HIPO_CAMJE (SWALL:P45493) (383 aa) fasta scores: E(): 5.6e-56, 44.44% id in 387 aa, and to Agrobacterium tumefaciens amidohydrolase atu3635 or agr_l_2386 SWALL:Q8U9U0 (EMBL:AE009292) (430 aa) fasta scores: E(): 6.1e-67, 47.84% id in 395 aa; peptidase 360140..361327 Burkholderia pseudomallei K96243 3096348 YP_110292.1 CDS BPSS0272 NC_006351.1 361615 362931 D Similar to Pseudomonas aeruginosa probable MFS transporter pa4343 SWALL:Q9HW58 (EMBL:AE004850) (439 aa) fasta scores: E(): 2.3e-64, 46.82% id in 425 aa, and to Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 1.3e-45, 36.77% id in 416 aa; transporter protein 361615..362931 Burkholderia pseudomallei K96243 3096146 YP_110293.1 CDS BPSS0273 NC_006351.1 363494 364213 R Similar to Escherichia coli and Escherichia coli O6 hypothetical transcriptional regulator YcdC or b1013 or c1150 SWALL:YCDC_ECOLI (SWALL:P75899) (212 aa) fasta scores: E(): 8.2e-22, 38.42% id in 190 aa, and to Pseudomonas putida transcriptional regulator, TetR family pp0594 SWALL:AAN66221 (EMBL:AE016776) (247 aa) fasta scores: E(): 8e-30, 37.39% id in 238 aa; TetR family transcriptional regulator complement(363494..364213) Burkholderia pseudomallei K96243 3096261 YP_110294.1 CDS BPSS0274 NC_006351.1 364563 365420 R Similar to Pseudomonas putida pca regulon regulatory protein PcaR SWALL:PCAR_PSEPU (SWALL:Q52154) (291 aa) fasta scores: E(): 1.8e-38, 42.85% id in 273 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2255 or rs01304 SWALL:Q8XX61 (EMBL:AL646069) (275 aa) fasta scores: E(): 1.2e-68, 67.75% id in 276 aa. Possible alternative translational start site; IclR family transcriptional regulator complement(364563..365420) Burkholderia pseudomallei K96243 3096262 YP_110295.1 CDS pcaF NC_006351.1 365585 366787 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 365585..366787 Burkholderia pseudomallei K96243 3095279 YP_110296.1 CDS aer NC_006351.1 367570 369114 D Similar to Escherichia coli aerotaxis receptor Aer or Air or b3072 SWALL:AER_ECOLI (SWALL:P50466) (506 aa) fasta scores: E(): 7.6e-83, 51.65% id in 515 aa, and to Ralstonia solanacearum probable aerotaxis sensor receptor rsp1224 or rs03168 SWALL:Q8XQK0 (EMBL:AL646083) (514 aa) fasta scores: E(): 8.2e-120, 69.84% id in 514 aa; aerotaxis receptor 367570..369114 Burkholderia pseudomallei K96243 3096239 YP_110297.1 CDS BPSS0277 NC_006351.1 369207 370223 R Similar to Streptomyces sp. JP95 methyltransferase GrhL SWALL:Q8KSX2 (EMBL:AF509565) (343 aa) fasta scores: E(): 2e-16, 27.32% id in 333 aa, and to Mycobacterium tuberculosis methyltransferase rv0567 or mt0593 or mtv039.05 SWALL:O53764 (EMBL:AL021942) (340 aa) fasta scores: E(): 1.1e-16, 28.03% id in 321 aa; methyltransferase complement(369207..370223) Burkholderia pseudomallei K96243 3096479 YP_110298.1 CDS BPSS0278 NC_006351.1 370641 371681 R Low similarity to Pseudomonas sp. vanillate O-demethylase oxygenase subunit VanA SWALL:VANA_PSESP (SWALL:O05616) (354 aa) fasta scores: E(): 1.9e-06, 24.49% id in 298 aa, and to Xanthomonas campestris vanillate O-demethylase oxygenase subunit xcc0363 SWALL:AAM39682 (EMBL:AE012132) (358 aa) fasta scores: E(): 1.7e-08, 25.98% id in 304 aa; oxygenase complement(370641..371681) Burkholderia pseudomallei K96243 3095517 YP_110299.1 CDS BPSS0279 NC_006351.1 371678 372625 R Very low similarity to parts of Arabidopsis thaliana rieske iron-sulfur protein at2g24820 SWALL:Q9SK50 (EMBL:AC006585) (539 aa) fasta scores: E(): 8e-13, 29.8% id in 255 aa, and to Anabaena sp. hypothetical protein all3866 SWALL:Q8YQG5 (EMBL:AP003594) (351 aa) fasta scores: E(): 8.4e-10, 32.89% id in 152 aa; Rieske iron-sulfur protein complement(371678..372625) Burkholderia pseudomallei K96243 3095518 YP_110300.1 CDS gabD NC_006351.1 374061 375530 R Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 1.4e-130, 69.7% id in 482 aa, and to Salmonella typhi succinate-semialdehyde dehydrogenase sty2911 SWALL:Q8Z4F8 (EMBL:AL627276) (482 aa) fasta scores: E(): 7.2e-131, 70.12% id in 482 aa; succinate-semialdehyde dehydrogenase complement(374061..375530) Burkholderia pseudomallei K96243 3095352 YP_110301.1 CDS gabT NC_006351.1 375588 376871 R Similar to Escherichia coli 4-aminobutyrate aminotransferase GabT or b2662 SWALL:GABT_ECOLI (SWALL:P22256) (426 aa) fasta scores: E(): 4.8e-79, 54.24% id in 424 aa, and to Ralstonia solanacearum probable 4-aminobutyrate aminotransferase rsc0029 or rs01852 SWALL:Q8Y3F1 (EMBL:AL646057) (426 aa) fasta scores: E(): 1.5e-108, 71.29% id in 418 aa; 4-aminobutyrate aminotransferase complement(375588..376871) Burkholderia pseudomallei K96243 3095139 YP_110302.1 CDS BPSS0282 NC_006351.1 377013 378707 D Similar to Ralstonia solanacearum transcription regulator protein rsc0030 or rs01853 SWALL:Q8Y3F0 (EMBL:AL646057) (509 aa) fasta scores: E(): 3e-74, 57.69% id in 520 aa, and to Yersinia pestis GntR-family regulatory protein ypo2845 or y1389 SWALL:Q8ZCW3 (EMBL:AJ414154) (501 aa) fasta scores: E(): 3e-61, 46.1% id in 514 aa; GntR family transcriptional regulator 377013..378707 Burkholderia pseudomallei K96243 3096438 YP_110303.1 CDS BPSS0283 NC_006351.1 378724 380208 R Similar to Bacillus halodurans hypothetical protein bh2308 SWALL:Q9KAH9 (EMBL:AP001515) (470 aa) fasta scores: E(): 1.9e-35, 25.87% id in 460 aa, and to Salmonella typhi membrane protein sty4802 SWALL:Q8Z128 (EMBL:AL627283) (467 aa) fasta scores: E(): 6.2e-19, 28.75% id in 480 aa; hypothetical protein complement(378724..380208) Burkholderia pseudomallei K96243 3096341 YP_110304.1 CDS BPSS0284 NC_006351.1 380274 381041 R Similar to Escherichia coli transcriptional regulator KdgR or b1827 SWALL:KDGR_ECOLI (SWALL:P76268) (263 aa) fasta scores: E(): 1.8e-15, 30.92% id in 249 aa, and to Bacillus halodurans transcriptional regulator bh2137 SWALL:Q9KAZ9 (EMBL:AP001514) (251 aa) fasta scores: E(): 1e-18, 31.85% id in 248 aa; IclR family transcriptional regulator complement(380274..381041) Burkholderia pseudomallei K96243 3096342 YP_110305.1 CDS BPSS0285 NC_006351.1 381038 381946 R Similar to Rhizobium loti N-formylglutamate amidohydrolase mll3040 SWALL:Q98H42 (EMBL:AP003001) (313 aa) fasta scores: E(): 1.5e-28, 37.72% id in 273 aa, and to Agrobacterium tumefaciens hypothetical protein atu3884 or agr_l_1927 SWALL:Q8U946 (EMBL:AE009319) (294 aa) fasta scores: E(): 8.5e-28, 36.49% id in 274 aa; hypothetical protein complement(381038..381946) Burkholderia pseudomallei K96243 3096046 YP_110306.1 CDS BPSS0286 NC_006351.1 382862 383695 R Similar to Rhizobium loti hypothetical protein mlr7896 SWALL:Q984Q1 (EMBL:AP003012) (278 aa) fasta scores: E(): 7.6e-27, 40.14% id in 269 aa, and to Streptomyces coelicolor integral membrane protein sco3164 or sce87.15C SWALL:Q9RKC3 (EMBL:AL939115) (281 aa) fasta scores: E(): 1.8e-26, 39.63% id in 275 aa; hypothetical protein complement(382862..383695) Burkholderia pseudomallei K96243 3096677 YP_110307.1 CDS selD NC_006351.1 383913 384977 D catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 383913..384977 Burkholderia pseudomallei K96243 3095787 YP_110308.1 CDS BPSS0288 NC_006351.1 386335 387396 D Similar to Ralstonia solanacearum purine nucleoside permease rsc0798 or rs05039 SWALL:Q8Y192 (EMBL:AL646061) (381 aa) fasta scores: E(): 2e-74, 56.32% id in 348 aa, and to Brucella melitensis purine nucleoside permease bmei0469 SWALL:Q8YIH5 (EMBL:AE009489) (345 aa) fasta scores: E(): 3.8e-56, 48.11% id in 318 aa; lipoprotein 386335..387396 Burkholderia pseudomallei K96243 3096192 YP_110309.1 CDS BPSS0289 NC_006351.1 387636 387929 R hypothetical protein complement(387636..387929) Burkholderia pseudomallei K96243 3096193 YP_110310.1 CDS BPSS0290 NC_006351.1 388854 389858 R Similar to Burkholderia cepacia transcriptional regulator CeoR SWALL:Q8VL17 (EMBL:AY008288) (334 aa) fasta scores: E(): 8.5e-123, 91.01% id in 334 aa, and to Salmonella typhi transcriptional regulator sty1386 SWALL:Q8Z7A3 (EMBL:AL627270) (301 aa) fasta scores: E(): 8.7e-49, 43.79% id in 290 aa; LysR family transcriptional regulator complement(388854..389858) Burkholderia pseudomallei K96243 3096004 YP_110311.1 CDS BPSS0291 NC_006351.1 389951 390901 D C-terminal region is similar to Burkholderia cepacia lipase-like protein LlpE SWALL:Q8VL16 (EMBL:AY008288) (286 aa) fasta scores: E(): 7.8e-78, 74.55% id in 283 aa. C-terminus is similar to the C-terminal region of Ralstonia solanacearum probable lipase rsp1111 or rs02619 SWALL:Q8XQV7 (EMBL:AL646082) (357 aa) fasta scores: E(): 5.4e-46, 50.9% id in 277 aa; carboxylesterase 389951..390901 Burkholderia pseudomallei K96243 3095511 YP_110312.1 CDS BPSS0292 NC_006351.1 390952 392181 D Similar to Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor AcrA or MtcA or Lir or b0463 or z0578 or ecs0516 SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 5.3e-33, 32.98% id in 385 aa, and to Ralstonia solanacearum probable transmembrane multidrug efflux system transmembrane protein ys02620 or rsp1112 or rs02620 SWALL:Q8XQV6 (EMBL:AL646082) (438 aa) fasta scores: E(): 6.1e-78, 57.77% id in 405 aa; multidrug efflux system exported protein 390952..392181 Burkholderia pseudomallei K96243 3095512 YP_110313.1 CDS BPSS0293 NC_006351.1 392243 395428 D Similar to Pseudomonas aeruginosa multidrug resistance protein MexB or pa0426 SWALL:MEXB_PSEAE (SWALL:P52002) (1046 aa) fasta scores: E(): 3e-158, 42.63% id in 1046 aa, and to Escherichia coli probable aminoglycoside efflux pump AcrD or b2470 SWALL:ACRD_ECOLI (SWALL:P24177) (1037 aa) fasta scores: E(): 5.4e-157, 41.32% id in 1038 aa; multidrug-efflux transporter protein 392243..395428 Burkholderia pseudomallei K96243 3096213 YP_110314.1 CDS BPSS0294 NC_006351.1 395439 396971 D Similar to Ralstonia solanacearum outer-membrane drug efflux protein rsp1114 or rs05506 SWALL:Q8XQV4 (EMBL:AL646082) (508 aa) fasta scores: E(): 8.9e-99, 59.63% id in 493 aa, and to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 2.2e-39, 35.33% id in 484 aa; multidrug efflux system lipoprotein 395439..396971 Burkholderia pseudomallei K96243 3095805 YP_110315.1 CDS BPSS0295 NC_006351.1 397880 399121 R Similar to Escherichia coli O157:H7 symport protein z0888 or ecs0758 SWALL:Q8X4W0 (EMBL:AE005251) (426 aa) fasta scores: E(): 2.6e-37, 33% id in 406 aa, and to Bacillus subtilis C4-dicarboxylate transport protein DctA or DctP SWALL:DCTA_BACSU (SWALL:P96603) (421 aa) fasta scores: E(): 2.4e-35, 30.53% id in 393 aa; transport related membrane protein complement(397880..399121) Burkholderia pseudomallei K96243 3095806 YP_110316.1 CDS BPSS0296 NC_006351.1 399105 399764 R Similar to Bradyrhizobium japonicum transcriptional regulatory protein bll4018 SWALL:BAC49283 (EMBL:AP005949) (230 aa) fasta scores: E(): 1.8e-26, 40.8% id in 223 aa, and to Thermoanaerobacter tengcongensis transcriptional regulator tte2558 SWALL:Q8R766 (EMBL:AE013196) (225 aa) fasta scores: E(): 1e-12, 31.52% id in 203 aa; GntR family transcriptional regulator complement(399105..399764) Burkholderia pseudomallei K96243 3097000 YP_110317.1 CDS BPSS0297 NC_006351.1 399920 400390 D Similar to Listeria innocua hypothetical protein lin2871 SWALL:Q927B8 (EMBL:AL596173) (153 aa) fasta scores: E(): 5.2e-07, 33.61% id in 119 aa, and to Bacillus subtilis YitI protein SWALL:O06744 (EMBL:Z99109) (154 aa) fasta scores: E(): 4.6e-05, 27.48% id in 131 aa; acetyltransferase 399920..400390 Burkholderia pseudomallei K96243 3097001 YP_110318.1 CDS BPSS0298 NC_006351.1 400571 401470 R Similar to Xanthomonas axonopodis hypothetical protein xac0191 SWALL:AAM35083 (EMBL:AE011644) (305 aa) fasta scores: E(): 3.3e-21, 31.86% id in 295 aa, and to Aquifex aeolicus hypothetical protein aq_1392 SWALL:O67397 (EMBL:AE000738) (292 aa) fasta scores: E(): 3e-14, 28.85% id in 298 aa; transport related membrane protein complement(400571..401470) Burkholderia pseudomallei K96243 3096364 YP_110319.1 CDS BPSS0299 NC_006351.1 401900 403765 R Similar to the N-terminal region of Streptomyces coelicolor polyketide synthase sco5892 or sc3f7.12 SWALL:O54155 (EMBL:AL939125) (2297 aa) fasta scores: E(): 2.6e-69, 41.73% id in 587 aa, and to the full length of Mycobacterium tuberculosis fatty-acid--CoA ligase rv1521 or mt1572 or mtcy19g5.07 SWALL:FD25_MYCTU (SWALL:Q50586) (583 aa) fasta scores: E(): 5.3e-56, 36.65% id in 592 aa; fatty-acid CoA ligase complement(401900..403765) Burkholderia pseudomallei K96243 3096062 YP_110320.1 CDS BPSS0300 NC_006351.1 403782 404681 R Similar to Escherichia coli, and Escherichia coli O6 malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 or c1361 SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 2.6e-24, 34.75% id in 305 aa, and to Bacillus subtilis PksC protein SWALL:O34825 (EMBL:Z99112) (288 aa) fasta scores: E(): 1.3e-39, 43.35% id in 286 aa; malonyl CoA-ACP transacylase complement(403782..404681) Burkholderia pseudomallei K96243 3096063 YP_110321.1 CDS BPSS0301 NC_006351.1 404682 405113 R hypothetical protein complement(404682..405113) Burkholderia pseudomallei K96243 3095252 YP_110322.1 CDS BPSS0302 NC_006351.1 405181 407040 R Similar to Escherichia coli probable crotonobetaine/carnitine-CoA ligase CaiC or b0037 SWALL:CAIC_ECOLI (SWALL:P31552) (522 aa) fasta scores: E(): 2.8e-37, 29.91% id in 488 aa, and to Mycobacterium tuberculosis chain fatty-acid-CoA ligase FadD13 or rv3089 or mtv013.10 or mt3174 SWALL:O53306 (EMBL:AL021309) (503 aa) fasta scores: E(): 5.9e-43, 32.62% id in 518 aa; fatty acid biosynthesis-related CoA ligase complement(405181..407040) Burkholderia pseudomallei K96243 3095150 YP_110323.1 CDS BPSS0303 NC_006351.1 407070 408329 R Similar to Pseudomonas aeruginosa diaminopimelate decarboxylase pa5277 SWALL:DCDA_PSEAE (SWALL:P19572) (415 aa) fasta scores: E(): 1.6e-21, 31.68% id in 404 aa, and to Escherichia coli diaminopimelate decarboxylase LysA or b2838 SWALL:DCDA_ECOLI (SWALL:P00861) (420 aa) fasta scores: E(): 4.8e-19, 31.76% id in 403 aa; diaminopimelate decarboxylase complement(407070..408329) Burkholderia pseudomallei K96243 3095151 YP_110324.1 CDS BPSS0304 NC_006351.1 408326 409807 R hypothetical protein complement(408326..409807) Burkholderia pseudomallei K96243 3096185 YP_110325.1 CDS BPSS0305 NC_006351.1 409804 410859 R Similar to Bacillus subtilis ketol-acid reductoisomerase IlvC SWALL:ILVC_BACSU (SWALL:P37253) (342 aa) fasta scores: E(): 7e-27, 36.91% id in 298 aa, and to Neisseria meningitidis ketol-acid reductoisomerase nma1763 SWALL:ILVC_NEIMA (SWALL:Q9JTI3) (337 aa) fasta scores: E(): 9.9e-31, 35.71% id in 322 aa; ketol-acid reductoisomerase complement(409804..410859) Burkholderia pseudomallei K96243 3095147 YP_110326.1 CDS BPSS0306 NC_006351.1 410865 423266 R Similar to Xanthomonas albilineans albicidin multifunctional polyketide-peptide synthase XabB SWALL:Q9AIT3 (EMBL:AF239749) (4801 aa) fasta scores: E(): 1.4e-123, 36.11% id in 3458 aa, and to Bacillus subtilis polyketide synthase PksM or PksY SWALL:PKSM_BACSU (SWALL:P40872) (4273 aa) fasta scores: E(): 2.3e-93, 36% id in 2861 aa; multifunctional polyketide-peptide syntase complement(410865..423266) Burkholderia pseudomallei K96243 3095148 YP_110327.1 CDS BPSS0307 NC_006351.1 423325 424737 R catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase complement(423325..424737) Burkholderia pseudomallei K96243 3096346 YP_110328.1 CDS BPSS0308 NC_006351.1 424731 426152 R Similar to Rhizobium loti aminotransferase mll3663 SWALL:Q98FQ6 (EMBL:AP003002) (472 aa) fasta scores: E(): 4.5e-88, 48.42% id in 444 aa, and to Pseudomonas aeruginosa probable class III aminotransferase pa4805 SWALL:Q9HV04 (EMBL:AE004893) (468 aa) fasta scores: E(): 4.9e-82, 47.21% id in 449 aa; hypothetical protein complement(424731..426152) Burkholderia pseudomallei K96243 3096053 YP_110329.1 CDS BPSS0309 NC_006351.1 426161 427240 R Similar to Pseudomonas syringae syringomycin biosynthesis enzyme SyrP SWALL:P97053 (EMBL:U88574) (353 aa) fasta scores: E(): 2.4e-22, 31.43% id in 334 aa, and to Streptomyces verticillus SyrP-like protein SWALL:Q9FB16 (EMBL:AF210249) (339 aa) fasta scores: E(): 1.8e-21, 29.51% id in 332 aa; peptide synthase regulatory protein complement(426161..427240) Burkholderia pseudomallei K96243 3096054 YP_110330.1 CDS BPSS0310 NC_006351.1 428238 428756 R hypothetical protein complement(428238..428756) Burkholderia pseudomallei K96243 3095679 YP_110331.1 CDS BPSS0311 NC_006351.1 428856 437384 R Similar to Microcystis aeruginosa peptide synthetase and polyketide synthase McyG SWALL:Q9FDT8 (EMBL:AB032549) (2632 aa) fasta scores: E(): 1.9e-45, 25.62% id in 2420 aa, and to Ralstonia solanacearum probable polyketide synthase rsc1810 or rs04235 SWALL:Q8XYE8 (EMBL:AL646066) (2380 aa) fasta scores: E(): 1.5e-46, 29.7% id in 2013 aa; multifunctional polyketide-peptide syntase complement(428856..437384) Burkholderia pseudomallei K96243 3096234 YP_110332.1 CDS BPSS0312 NC_006351.1 438602 439306 D Similar to Vibrio anguillarum transcriptional activator protein VanR SWALL:VANR_VIBAN (SWALL:P74946) (240 aa) fasta scores: E(): 2e-21, 34.32% id in 201 aa, and to Ralstonia solanacearum transcriptional activator protein SolR or rsc3287 or rs02516 SWALL:SLR1_RALSO (SWALL:P58590) (236 aa) fasta scores: E(): 2.2e-22, 37.76% id in 233 aa; LuxR family transcriptional regulator 438602..439306 Burkholderia pseudomallei K96243 3096235 YP_110333.1 CDS BPSS0313 NC_006351.1 439636 440475 D Similar to Pasteurella haemolytica outer membrane lipoprotein 2 precursor PlpB SWALL:PLPB_PASHA (SWALL:Q08869) (276 aa) fasta scores: E(): 4.2e-28, 40.69% id in 231 aa, and to Escherichia coli O157:H7 D-methionine-binding lipoprotein precursor MetQ or z0209 or ecs0199 SWALL:Q8X8V9 (EMBL:AE005195) (271 aa) fasta scores: E(): 4.8e-28, 40.24% id in 246 aa; lipoprotein 439636..440475 Burkholderia pseudomallei K96243 3095365 YP_110334.1 CDS BPSS0314 NC_006351.1 440493 441887 D Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme A SoxA or DdszA SWALL:SOXA_RHOSG (SWALL:P54995) (453 aa) fasta scores: E(): 5.2e-52, 38.32% id in 454 aa; monooxygenase 440493..441887 Burkholderia pseudomallei K96243 3096112 YP_110335.1 CDS BPSS0315 NC_006351.1 441956 443098 D Similar to Escherichia coli D-methionine transport ATP-binding protein MetN or Abc or b0199 SWALL:METN_ECOLI (SWALL:P30750) (343 aa) fasta scores: E(): 6.1e-42, 46.32% id in 354 aa, and to Pseudomonas putida ABC transporter ATP-binding protein pp0220 SWALL:AAN65852 (EMBL:AE016774) (369 aa) fasta scores: E(): 5.1e-52, 53.03% id in 379 aa; ABC transporter ATP-binding protein 441956..443098 Burkholderia pseudomallei K96243 3096113 YP_110336.1 CDS BPSS0316 NC_006351.1 443091 443747 D Similar to Pseudomonas aeruginosa probable permease of ABC transporter pa2351 SWALL:Q9I1C7 (EMBL:AE004661) (217 aa) fasta scores: E(): 5.6e-52, 68.66% id in 217 aa, and to Brucella melitensis ABC transporter permease bmeii0336 SWALL:Q8YD41 (EMBL:AE009671) (230 aa) fasta scores: E(): 3.7e-47, 62.21% id in 217 aa; ACB transport system, membrane protein 443091..443747 Burkholderia pseudomallei K96243 3095909 YP_110337.1 CDS BPSS0317 NC_006351.1 444511 445713 D Similar to Pseudomonas aeruginosa probable FMNH2-dependent monooxygenase pa2355 SWALL:Q9I1C3 (EMBL:AE004661) (394 aa) fasta scores: E(): 3.6e-63, 46.03% id in 391 aa, and to Rhodococcus sp. dibenzothiophene desulfurization enzyme C SoxC or DszC SWALL:SOXC_RHOSO (SWALL:P54998) (417 aa) fasta scores: E(): 5.9e-34, 41.04% id in 402 aa; monooxygenase 444511..445713 Burkholderia pseudomallei K96243 3096050 YP_110338.1 CDS BPSS0318 NC_006351.1 445815 446642 R hypothetical protein complement(445815..446642) Burkholderia pseudomallei K96243 3096051 YP_110339.1 CDS BPSS0319 NC_006351.1 446938 447537 R hypothetical protein complement(446938..447537) Burkholderia pseudomallei K96243 3096268 YP_110340.1 CDS BPSS0320 NC_006351.1 447574 448293 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 pyruvate dehydrogenase complex repressor PdhR or GenA or AceC or b0113 or c0140 or z0123 or ecs0117 SWALL:PDHR_ECOLI (SWALL:P06957) (254 aa) fasta scores: E(): 3.5e-24, 39.48% id in 233 aa, and to Yersinia pestis transcriptional regulator for pyruvate dehydrogenase complex y0766 SWALL:AAM84353 (EMBL:AE013678) (278 aa) fasta scores: E(): 9.3e-25, 38.75% id in 240 aa; GntR family transcriptional regulator complement(447574..448293) Burkholderia pseudomallei K96243 3095999 YP_110341.1 CDS BPSS0321 NC_006351.1 448742 449548 D Similar to Escherichia coli hypothetical protein YkgE or b0306 SWALL:YKGE_ECOLI (SWALL:P77252) (239 aa) fasta scores: E(): 5.7e-35, 43.03% id in 237 aa, and to Ralstonia solanacearum hypothetical protein rsc1611 or rs03974 SWALL:Q8XYZ5 (EMBL:AL646065) (241 aa) fasta scores: E(): 5.5e-50, 56.25% id in 240 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 448742..449548 Burkholderia pseudomallei K96243 3096000 YP_110342.1 CDS BPSS0322 NC_006351.1 449545 450993 D Similar to Ralstonia solanacearum iron-sulfur binding protein rsc1612 or rs03975 SWALL:Q8XYZ4 (EMBL:AL646065) (469 aa) fasta scores: E(): 3.2e-76, 46.45% id in 465 aa, and to Pasteurella multocida hypothetical protein pm1854 SWALL:Q9CJY4 (EMBL:AE006223) (467 aa) fasta scores: E(): 9.4e-67, 41.59% id in 464 aa; iron-sulfur binding protein 449545..450993 Burkholderia pseudomallei K96243 3096214 YP_110343.1 CDS BPSS0323 NC_006351.1 450990 451715 D C-terminus is similar to the C-terminal regions of Ralstonia solanacearum transmembrane protein rsc1032 or rs04218 SWALL:Q8Y0L1 (EMBL:AL646062) (243 aa) fasta scores: E(): 7.3e-15, 41.11% id in 180 aa, and Bacillus subtilis YvbY protein SWALL:O32259 (EMBL:Z99121) (240 aa) fasta scores: E(): 3.6e-07, 30.86% id in 162 aa; hypothetical protein 450990..451715 Burkholderia pseudomallei K96243 3096204 YP_110344.1 CDS glcA NC_006351.1 452083 453801 D Similar to Escherichia coli glycolate permease GlcA or b2975 SWALL:GLCA_ECOLI (SWALL:Q46839) (560 aa) fasta scores: E(): 3.4e-77, 68.47% id in 571 aa, and to Escherichia coli L-lactate permease LldP or LctP or b3603 SWALL:LLDP_ECOLI (SWALL:P33231) (551 aa) fasta scores: E(): 3.5e-65, 59.47% id in 570 aa; glycolate permease 452083..453801 Burkholderia pseudomallei K96243 3095424 YP_110345.1 CDS BPSS0325 NC_006351.1 454103 454540 D Similar to Escherichia coli hypothetical protein YphA or b2543 SWALL:YPHA_ECOLI (SWALL:P77751) (140 aa) fasta scores: E(): 8.9e-16, 40.32% id in 124 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2500 or rs01095 SWALL:Q8XWH4 (EMBL:AL646070) (136 aa) fasta scores: E(): 2.5e-14, 42.85% id in 119 aa; hypothetical protein 454103..454540 Burkholderia pseudomallei K96243 3096205 YP_110346.1 CDS BPSS0326 NC_006351.1 454731 456302 R Similar (appart from the internal repeat region) the plasmid-borne Streptomyces coelicolor methylenomycin A resistance protein Mmr or scp1.237C SWALL:MMR_STRCO (SWALL:P11545) (475 aa) fasta scores: E(): 7.2e-20, 32.75% id in 464 aa, and to Rhizobium loti probable transporter mll2542 SWALL:Q98I66 (EMBL:AP002999) (505 aa) fasta scores: E(): 8.6e-22, 32.99% id in 494 aa. The effect of the extra internal amino acids on the function of protein is not known; transport-related membrane protein complement(454731..456302) Burkholderia pseudomallei K96243 3095212 YP_110347.1 CDS BPSS0327 NC_006351.1 456588 457880 R Similar to Pseudomonas aeruginosa probable MFS transporter pa5370 SWALL:Q9HTJ4 (EMBL:AE004949) (438 aa) fasta scores: E(): 1.6e-109, 66.82% id in 425 aa, and to Agrobacterium tumefaciens MFS permease[proline/betaine] TphA or atu2154 or agr_c_3904 SWALL:Q8UDH1 (EMBL:AE009165) (443 aa) fasta scores: E(): 1.5e-88, 55.76% id in 416 aa; sugar transport-related, membrane protein complement(456588..457880) Burkholderia pseudomallei K96243 3096012 YP_110348.1 CDS BPSS0328 NC_006351.1 458196 459230 R Similar to Methanothermus fervidus malate/L-sulfolactate dehydrogenase Mdh SWALL:MDH_METFE (SWALL:P16142) (339 aa) fasta scores: E(): 6.7e-22, 31.76% id in 277 aa, and to Pseudomonas aeruginosa hypothetical oxidoreductase pa1252 SWALL:YC52_PSEAE (SWALL:Q9I492) (334 aa) fasta scores: E(): 5.2e-77, 61.56% id in 333 aa; malate/L-lactate dehydrogenase complement(458196..459230) Burkholderia pseudomallei K96243 3096013 YP_110349.1 CDS BPSS0329 NC_006351.1 459223 460815 R Similar to Caulobacter crescentus fatty aldehyde dehydrogenase cc2791 SWALL:Q9A4N9 (EMBL:AE005944) (528 aa) fasta scores: E(): 6.8e-120, 65.7% id in 522 aa, and to Vibrio harveyi fatty aldehyde dehydrogenase AldH SWALL:DHAF_VIBHA (SWALL:Q56694) (510 aa) fasta scores: E(): 1.5e-76, 47.22% id in 504 aa. Note: Also similar to BPSS0034 (527 aa) fasta scores: E(): 7.3e-87, 60.803% identity in 523 aa overlap; fatty aldehyde dehydrogenase complement(459223..460815) Burkholderia pseudomallei K96243 3095117 YP_110350.1 CDS BPSS0330 NC_006351.1 460891 462516 R Similar to Xanthomonas campestris amino acid permease YveA or xcc2406 SWALL:AAM41684 (EMBL:AE012351) (528 aa) fasta scores: E(): 4.7e-138, 70.19% id in 520 aa, and to Ralstonia solanacearum probable amino-acid permease transmembrane protein rsp0282 or rs03682 SWALL:Q8XT33 (EMBL:AL646077) (543 aa) fasta scores: E(): 4.4e-69, 38.47% id in 512 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; amino-acid permease membrane protein complement(460891..462516) Burkholderia pseudomallei K96243 3096902 YP_110351.1 CDS BPSS0331 NC_006351.1 462961 463881 R Similar to Prochlorococcus marinus dihydrodipicolinate synthase DapA SWALL:DAPA_PROMA (SWALL:P49423) (302 aa) fasta scores: E(): 1.1e-19, 30.24% id in 291 aa, and to Pseudomonas aeruginosa probable dihydrodipicolinate synthetase pa1254 SWALL:Q9I490 (EMBL:AE004555) (305 aa) fasta scores: E(): 3.3e-92, 73.52% id in 306 aa; dihydrodipicolinate synthase complement(462961..463881) Burkholderia pseudomallei K96243 3096903 YP_110352.1 CDS BPSS0332 NC_006351.1 464132 465064 D Similar to Pseudomonas aeruginosa hypothetical protein pa1268 SWALL:Q9I476 (EMBL:AE004556) (314 aa) fasta scores: E(): 1.1e-84, 71.79% id in 312 aa, and to Xanthomonas axonopodis hypothetical protein xac2550 SWALL:AAM37401 (EMBL:AE011895) (312 aa) fasta scores: E(): 5e-64, 57.82% id in 313 aa; hydroxyproline-2-epimerase 464132..465064 Burkholderia pseudomallei K96243 3097013 YP_110353.1 CDS BPSS0333 NC_006351.1 465061 466194 D Similar to Xanthomonas campestris D-amino acid oxidase xcc2414 SWALL:AAM41692 (EMBL:AE012352) (389 aa) fasta scores: E(): 7.1e-63, 53.84% id in 364 aa, and to Rhizobium meliloti opine oxidase subunit B OoxB SWALL:OOB2_RHIME (SWALL:P72299) (371 aa) fasta scores: E(): 1.2e-08, 26.24% id in 381 aa; oxidase 465061..466194 Burkholderia pseudomallei K96243 3096960 YP_110354.1 CDS BPSS0334 NC_006351.1 466191 466424 D Similar to Xanthomonas campestris sarcosine oxidase alpha subunit SoxA or xcc2413 SWALL:AAM41691 (EMBL:AE012352) (81 aa) fasta scores: E(): 3.1e-08, 48.61% id in 72 aa, and to Pseudomonas aeruginosa hydrogen cyanide synthase HcnA or pa2193 SWALL:Q9REV9 (EMBL:AF208523) (104 aa) fasta scores: E(): 1.3e-07, 45.33% id in 75 aa; oxidase 466191..466424 Burkholderia pseudomallei K96243 3096961 YP_110355.1 CDS BPSS0335 NC_006351.1 466421 467713 D Similar to Rhizobium meliloti opine oxidase subunit A OoxA or ra1200 or sma2225 SWALL:OOA1_RHIME (SWALL:Q92XP4) (458 aa) fasta scores: E(): 3.2e-06, 32.88% id in 450 aa, and to Xanthomonas campestris oxidoreductase xcc2412 SWALL:AAM41690 (EMBL:AE012352) (444 aa) fasta scores: E(): 4.9e-58, 48.15% id in 434 aa; oxidoreductase 466421..467713 Burkholderia pseudomallei K96243 3096328 YP_110356.1 CDS BPSS0336 NC_006351.1 467905 468621 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1261 SWALL:Q9I483 (EMBL:AE004555) (224 aa) fasta scores: E(): 6.8e-51, 58.48% id in 224 aa, and to Xanthomonas axonopodis transcriptional regulator xac2551 SWALL:Q8PJI0 (EMBL:AE011895) (226 aa) fasta scores: E(): 1.5e-38, 45.53% id in 224 aa; AraC family transcriptional regulator 467905..468621 Burkholderia pseudomallei K96243 3095560 YP_110357.1 CDS BPSS0337 NC_006351.1 468818 469087 R hypothetical protein complement(468818..469087) Burkholderia pseudomallei K96243 3095561 YP_110358.2 CDS BPSS0338 NC_006351.1 469303 470583 R Similar to Shigella flexneri transposase for IS110 s0128 SWALL:Q9AFS5 (EMBL:AF348706) (398 aa) fasta scores: E(): 3e-111, 76.73% id in 404 aa, and to Streptomyces coelicolor insertion element IS110 hypothetical 43.6 kDa protein SWALL:YIS1_STRCO (SWALL:P19780) (405 aa) fasta scores: E(): 3.9e-75, 58.71% id in 390 aa. Note: Also similar to BPSS1472 (428 aa) fasta scores: E(): 9.1e-117, 88.732% identity in 426 aa overlap; insertion element protein complement(469303..470583) Burkholderia pseudomallei K96243 3096273 YP_110359.1 CDS BPSS0339 NC_006351.1 470668 472722 R Similar to Pseudomonas putida 4-hydroxyphenylpyruvate dioxygenase, pp2554 SWALL:AAN68163 (EMBL:AE016783) (635 aa) fasta scores: E(): 2.8e-61, 53.44% id in 683 aa. CDS contains region with additional internal amino acids (residues 272 to 338) in comparison to orthologues; amino acid dioxygenase complement(470668..472722) Burkholderia pseudomallei K96243 3096498 YP_110360.1 CDS aroQ2 NC_006351.1 472982 473437 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 472982..473437 Burkholderia pseudomallei K96243 3097223 YP_110361.1 CDS aroE NC_006351.1 473434 474288 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 473434..474288 Burkholderia pseudomallei K96243 3096311 YP_110362.1 CDS BPSS0342 NC_006351.1 474336 475682 D Similar to Ralstonia solanacearum glucarate transporter GudP or rsp0828 or rs05367 SWALL:Q8XRK3 (EMBL:AL646081) (450 aa) fasta scores: E(): 9.1e-73, 44.14% id in 444 aa, and to Escherichia coli, and Escherichia coli O6 D-galactonate transporter DgoT or b3691 or c4612 SWALL:DGOT_ECOLI (SWALL:P31457) (430 aa) fasta scores: E(): 9.8e-71, 46.26% id in 428 aa; sugar transport-related, membrane protein 474336..475682 Burkholderia pseudomallei K96243 3096499 YP_110363.1 CDS BPSS0343 NC_006351.1 476085 477194 R catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase complement(476085..477194) Burkholderia pseudomallei K96243 3095699 YP_110364.1 CDS BPSS0344 NC_006351.1 477432 478514 D Similar to Salmonella typhi probable periplasmic binding component of 2-aminoethylphosphonate transporter PhnS or sty0468 SWALL:Q8Z8W7 (EMBL:AL627266) (337 aa) fasta scores: E(): 1.8e-31, 37.03% id in 324 aa, and to Pyrococcus furiosus solute binding lipoprotein pf1751 SWALL:Q9HH27 (EMBL:AF307052) (357 aa) fasta scores: E(): 2.2e-19, 29.26% id in 352 aa; hypothetical protein 477432..478514 Burkholderia pseudomallei K96243 3096021 YP_110365.1 CDS BPSS0345 NC_006351.1 478571 479668 D Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase AfuC or atu4786 or agr_l_193 SWALL:Q8U6M1 (EMBL:AE009407) (353 aa) fasta scores: E(): 7e-41, 40.4% id in 349 aa, and to Brucella melitensis iron(III)-transport ATP-binding protein bmeii0567 SWALL:Q8YCG3 (EMBL:AE009693) (353 aa) fasta scores: E(): 2.6e-40, 44.59% id in 305 aa; ABC transporter ATP-binding protein 478571..479668 Burkholderia pseudomallei K96243 3096022 YP_110366.1 CDS BPSS0346 NC_006351.1 479646 480593 D Similar to Salmonella typhimurium PhnU or stm0427 SWALL:P96064 (EMBL:U69493) (286 aa) fasta scores: E(): 5.1e-28, 36.78% id in 261 aa, and to Brucella melitensis iron(III)-transport system permease bmeii0585 SWALL:Q8YCE6 (EMBL:AE009695) (448 aa) fasta scores: E(): 2.7e-14, 32.28% id in 285 aa. CDS is extended at the N-terminus in comparison to orthologues; ABC transporter membrane protein 479646..480593 Burkholderia pseudomallei K96243 3095966 YP_110367.1 CDS BPSS0347 NC_006351.1 480583 481437 D Similar to Salmonella typhimurium PhnV or stm0426 SWALL:P96065 (EMBL:U69493) (265 aa) fasta scores: E(): 2.7e-22, 34.97% id in 243 aa, and to Rhizobium meliloti spermidine putrescine ABC transporter permease PotC or rb0779 or smb21275 SWALL:Q92VC9 (EMBL:AL603644) (259 aa) fasta scores: E(): 5.8e-13, 30.54% id in 239 aa; ABC transporter membrane protein 480583..481437 Burkholderia pseudomallei K96243 3096002 YP_110368.1 CDS BPSS0348 NC_006351.1 481481 482752 D Similar to Pseudomonas fluorescens phosphonoacetate hydrolase PhnA SWALL:Q51782 (EMBL:L49465) (407 aa) fasta scores: E(): 1.5e-94, 60.48% id in 410 aa, and to Rhizobium meliloti phosphonoacetate hydrolase rb0978 or smb21538 SWALL:Q92UV8 (EMBL:AL603645) (424 aa) fasta scores: E(): 3.1e-85, 56.06% id in 412 aa; phosphonoacetate hydrolase 481481..482752 Burkholderia pseudomallei K96243 3096003 YP_110369.1 CDS BPSS0349 NC_006351.1 482758 484203 D Similar to Streptococcus mutans NADP-dependent glyceraldehyde-3-phosphate dehydrogenase GapN or smu.676 SWALL:GAPN_STRMU (SWALL:Q59931) (475 aa) fasta scores: E(): 3.5e-48, 35.32% id in 453 aa, and to Methanobacterium thermoautotrophicum NADP-dependent glyceraldehyde-3-phosphate dehydrogenase mth978 SWALL:O27059 (EMBL:AE000871) (455 aa) fasta scores: E(): 8.9e-58, 42.3% id in 442 aa. Note: Also similar to BPSS0607 (491 aa) fasta scores: E(): 2.8e-91, 59.244% identity in 476 aa overlap; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 482758..484203 Burkholderia pseudomallei K96243 3095849 YP_110370.1 CDS BPSS0350 NC_006351.1 484208 484759 D Similar to Anabaena sp. hypothetical protein all2220 SWALL:Q8YUW1 (EMBL:AP003588) (186 aa) fasta scores: E(): 2.9e-29, 47.54% id in 183 aa, and to Pseudomonas aeruginosa hypothetical protein pa2804 SWALL:Q9I039 (EMBL:AE004707) (193 aa) fasta scores: E(): 1.4e-25, 49.71% id in 175 aa; hypothetical protein 484208..484759 Burkholderia pseudomallei K96243 3097096 YP_110371.1 CDS BPSS0351 NC_006351.1 491060 491464 D Similar to Escherichia coli transcriptional regulator CueR or b0487 SWALL:CUER_ECOLI (SWALL:P77565) (135 aa) fasta scores: E(): 4.6e-18, 44.27% id in 131 aa, and to Rhizobium meliloti transcriptional regulator HmrR SWALL:HMRR_RHIME (SWALL:Q9X5X4) (147 aa) fasta scores: E(): 1.9e-30, 65.35% id in 127 aa; MerR family transcriptional regulator 491060..491464 Burkholderia pseudomallei K96243 3097097 YP_110372.1 CDS BPSS0352 NC_006351.1 492322 493167 R Similar to Escherichia coli hypothetical protein YhiR or b3499 SWALL:YHIR_ECOLI (SWALL:P37634) (280 aa) fasta scores: E(): 7.5e-46, 48.28% id in 263 aa, and to Ralstonia solanacearum hypothetical protein rsc3368 or rs02643 SWALL:Q8XU26 (EMBL:AL646075) (285 aa) fasta scores: E(): 1.4e-73, 62.1% id in 285 aa; hypothetical protein complement(492322..493167) Burkholderia pseudomallei K96243 3096091 YP_110373.1 CDS BPSS0353 NC_006351.1 493316 494287 R Similar to the C-terminal region of Homo sapiens voltage-gated potassium channel beta-2 subunit KCNAB2 or KCNA2b or KCNK2 SWALL:KVB2_HUMAN (SWALL:Q13303) (367 aa) fasta scores: E(): 4.2e-56, 45.79% id in 321 aa, and to Xanthomonas campestris voltage-gated potassium channel beta subunit XCC0766 SWALL:AAM40081 (EMBL:AE012176) (322 aa) fasta scores: E(): 5.7e-62, 52.97% id in 319 aa; potassium channel subunit complement(493316..494287) Burkholderia pseudomallei K96243 3095964 YP_110374.1 CDS BPSS0354 NC_006351.1 494475 495263 D catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 494475..495263 Burkholderia pseudomallei K96243 3095965 YP_110375.1 CDS tyrB NC_006351.1 495489 496688 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(495489..496688) Burkholderia pseudomallei K96243 3095099 YP_110376.1 CDS uvrB NC_006351.1 496976 499066 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 496976..499066 Burkholderia pseudomallei K96243 3096546 YP_110377.1 CDS BPSS0357 NC_006351.1 499290 499841 D Similar to Brucella melitensis 19 kDa periplasmic protein bmeii0885 SWALL:Q8YBL4 (EMBL:AE009722) (185 aa) fasta scores: E(): 2.8e-42, 61.62% id in 185 aa, and to Brucella suis membrane antigen, bra0381 SWALL:AAN33579 (EMBL:AE014537) (182 aa) fasta scores: E(): 4.4e-42, 67.27% id in 165 aa; hypothetical protein 499290..499841 Burkholderia pseudomallei K96243 3096107 YP_110378.1 CDS BPSS0358 NC_006351.1 499901 500230 D Similar to Brucella melitensis hypothetical protein bmeii0884 SWALL:Q8YBL5 (EMBL:AE009722) (124 aa) fasta scores: E(): 2.2e-13, 46.29% id in 108 aa, and to Rickettsia conorii hypothetical protein rc0541 SWALL:Q92I79 (EMBL:AE008615) (126 aa) fasta scores: E(): 2.7e-07, 38.27% id in 81 aa; hypothetical protein 499901..500230 Burkholderia pseudomallei K96243 3095949 YP_110379.1 CDS BPSS0359 NC_006351.1 500290 501132 D Similar to Escherichia coli hypothetical protein YcdN or b1016/b1017 SWALL:YCDN_ECOLI (SWALL:P75901) (276 aa) fasta scores: E(): 5e-17, 30.28% id in 284 aa, and to Brucella melitensis high-affinity iron permease bmeii0883 SWALL:Q8YBL6 (EMBL:AE009722) (278 aa) fasta scores: E(): 6.8e-49, 53.58% id in 265 aa; hypothetical protein 500290..501132 Burkholderia pseudomallei K96243 3095950 YP_110380.1 CDS BPSS0360 NC_006351.1 501129 502529 D Similar to Brucella melitensis nitrogen fixation protein VnfA bmeii0882 SWALL:Q8YBL7 (EMBL:AE009722) (457 aa) fasta scores: E(): 3.1e-104, 54.08% id in 453 aa, and to the C-terminal region of Anabaena sp. nitrogen assimilation regulatory protein all3558 SWALL:Q8YR90 (EMBL:AP003593) (841 aa) fasta scores: E(): 7.5e-11, 27.25% id in 466 aa; hypothetical protein 501129..502529 Burkholderia pseudomallei K96243 3095758 YP_110381.1 CDS BPSS0361 NC_006351.1 502589 502999 D Similar to Escherichia coli, and Escherichia coli O6 protein GlcG or b2977 or c3706 SWALL:GLCG_ECOLI (SWALL:P45504) (134 aa) fasta scores: E(): 1.9e-20, 49.24% id in 132 aa, and to Pseudomonas aeruginosa hypothetical protein pa5352 SWALL:Q9HTK6 (EMBL:AE004947) (133 aa) fasta scores: E(): 6.9e-22, 53.38% id in 133 aa; hypothetical protein 502589..502999 Burkholderia pseudomallei K96243 3096720 YP_110382.1 CDS BPSS0362 NC_006351.1 503302 503565 R Low similarity to Ralstonia solanacearum hemin uptake protein HemP or rsc1966 or rs03540 SWALL:Q8XXZ7 (EMBL:AL646067) (92 aa) fasta scores: E(): 0.0018, 39.02% id in 82 aa; hypothetical protein complement(503302..503565) Burkholderia pseudomallei K96243 3096721 YP_110383.1 CDS BPSS0363 NC_006351.1 503709 504194 R Similar to Ralstonia solanacearum hypothetical protein rsc1364 or rs04646 SWALL:Q8XZN1 (EMBL:AL646064) (156 aa) fasta scores: E(): 3.5e-24, 49.67% id in 155 aa, and to Pseudomonas aeruginosa hypothetical protein pa1206 SWALL:Q9I4D2 (EMBL:AE004550) (157 aa) fasta scores: E(): 6e-14, 38.81% id in 152 aa; hypothetical protein complement(503709..504194) Burkholderia pseudomallei K96243 3095788 YP_110384.1 CDS BPSS0364 NC_006351.1 504313 505185 R Similar to Streptomyces coelicolor possible chromosome condensation protein sco3798 or scac2.06C SWALL:Q9F320 (EMBL:AL939117) (325 aa) fasta scores: E(): 1.5e-47, 45.39% id in 293 aa, and to Lycopersicon esculentum pirin-like protein SWALL:PIRL_LYCES (SWALL:Q9SEE4) (291 aa) fasta scores: E(): 4.2e-45, 45.93% id in 283 aa; chromosome condensation protein complement(504313..505185) Burkholderia pseudomallei K96243 3095894 YP_110385.1 CDS BPSS0365 NC_006351.1 505308 506279 D Similar to Xanthomonas axonopodis transcriptional regulator xac1655 SWALL:AAM36523 (EMBL:AE011797) (333 aa) fasta scores: E(): 1.4e-49, 45.39% id in 315 aa, and to Yersinia pestis lysr-family transcriptional regulatory protein ypo2150 SWALL:Q8ZEL4 (EMBL:AJ414151) (301 aa) fasta scores: E(): 4.5e-45, 43.33% id in 300 aa. Note: This CDS contains two possible alternative start codons at residues 8 or 18; LysR family transcriptional regulator 505308..506279 Burkholderia pseudomallei K96243 3095895 YP_110386.1 CDS BPSS0366 NC_006351.1 506662 507084 R Similar to Xanthomonas campestris biopolymer transport protein ExbD1 or xcc0010 SWALL:EXB1_XANCP (SWALL:O34259) (140 aa) fasta scores: E(): 4.8e-18, 43.18% id in 132 aa, and to Ralstonia solanacearum probable biopolymer transport transmembrane protein rsc1965 or rs03539 SWALL:Q8XXZ8 (EMBL:AL646067) (137 aa) fasta scores: E(): 4.7e-30, 61.76% id in 136 aa; biopolymer transport protein complement(506662..507084) Burkholderia pseudomallei K96243 3096354 YP_110387.1 CDS BPSS0367 NC_006351.1 507104 507832 R Similar to Xanthomonas campestris biopolymer transport protein ExbB or xcc0009 SWALL:EXBB_XANCP (SWALL:O34260) (253 aa) fasta scores: E(): 1.3e-30, 42.46% id in 219 aa, and to Pseudomonas aeruginosa TolQ protein or pa0969 SWALL:TOLQ_PSEAE (SWALL:P50598) (231 aa) fasta scores: E(): 1.7e-15, 30.95% id in 210 aa; bipolymer transport protein complement(507104..507832) Burkholderia pseudomallei K96243 3096503 YP_110388.1 CDS BPSS0368 NC_006351.1 507869 508564 R Similar to Ralstonia solanacearum probable TonB transmembrane protein or rsc1963 or rs03537 SWALL:Q8XY00 (EMBL:AL646067) (221 aa) fasta scores: E(): 5.8e-10, 35.71% id in 238 aa, and to Bordetella bronchiseptica TonB SWALL:Q9ZG18 (EMBL:AF087669) (268 aa) fasta scores: E(): 2.4e-06, 33.86% id in 251 aa; TonB-like transport protein complement(507869..508564) Burkholderia pseudomallei K96243 3096504 YP_110389.1 CDS BPSS0369 NC_006351.1 508840 509079 R Similar to Escherichia coli, and Escherichia coli O6 bacterioferritin-associated ferredoxin Bfd or b3337 or c4108 SWALL:BFD_ECOLI (SWALL:P13655) (64 aa) fasta scores: E(): 0.002, 35.84% id in 53 aa, and to Ralstonia solanacearum bacterioferritin-associated ferredoxin protein rsc0349 or rs03316 SWALL:Q8Y2I7 (EMBL:AL646058) (91 aa) fasta scores: E(): 6.3e-07, 45.45% id in 55 aa. CDS is extended at the C-terminus in comparison to orthologues; bacterioferritin ferredoxin protein complement(508840..509079) Burkholderia pseudomallei K96243 3095842 YP_110390.1 CDS BPSS0370 NC_006351.1 509211 510083 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(509211..510083) Burkholderia pseudomallei K96243 3096298 YP_110391.1 CDS bfr NC_006351.1 510130 510606 R Similar to Azotobacter vinelandii bacterioferritin Bfr SWALL:BFR_AZOVI (SWALL:P22759) (156 aa) fasta scores: E(): 3.7e-38, 68.83% id in 154 aa, and to Serratia marcescens bacterioferritin Bfr SWALL:BFR_SERMA (SWALL:O68935) (159 aa) fasta scores: E(): 1.2e-32, 59.74% id in 154 aa; bacterioferritin complement(510130..510606) Burkholderia pseudomallei K96243 3097235 YP_110392.1 CDS BPSS0372 NC_006351.1 510761 512296 R Similar to Escherichia coli, and Escherichia coli O6 fumarate hydratase class I, aerobic FumA or b1612 or c2004 SWALL:FUMA_ECOLI (SWALL:P00923) (547 aa) fasta scores: E(): 1.1e-29, 33.89% id in 472 aa, and to Ralstonia solanacearum probable fumarate hydratase rsc1955 or rs03529 SWALL:Q8XY08 (EMBL:AL646067) (507 aa) fasta scores: E(): 1.3e-168, 85.51% id in 511 aa; fumarate hydratase complement(510761..512296) Burkholderia pseudomallei K96243 3096299 YP_110393.1 CDS BPSS0373 NC_006351.1 512336 512944 R Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YqhA or b3002 or z4355 or ecs3886 SWALL:YQHA_ECOLI (SWALL:P52082) (164 aa) fasta scores: E(): 8.3e-22, 37.65% id in 162 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1954 or rs03528 SWALL:Q8XY09 (EMBL:AL646067) (179 aa) fasta scores: E(): 6.6e-50, 78.78% id in 165 aa; hypothetical protein complement(512336..512944) Burkholderia pseudomallei K96243 3094938 YP_110394.1 CDS BPSS0374 NC_006351.1 513177 514076 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1953 or rs03527 SWALL:Q8XY10 (EMBL:AL646067) (336 aa) fasta scores: E(): 2.9e-71, 66.1% id in 298 aa, and to Bacillus subtilis hypothetical transport protein YetK SWALL:YETK_BACSU (SWALL:O31540) (330 aa) fasta scores: E(): 2.6e-32, 33.55% id in 295 aa; hypothetical protein complement(513177..514076) Burkholderia pseudomallei K96243 3095533 YP_110395.1 CDS acoE NC_006351.1 514366 516348 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 514366..516348 Burkholderia pseudomallei K96243 3095797 YP_110396.1 CDS BPSS0376 NC_006351.1 516446 516826 D hypothetical protein 516446..516826 Burkholderia pseudomallei K96243 3095534 YP_110397.1 CDS BPSS0377 NC_006351.1 516820 518835 D Similar to Ralstonia solanacearum probable solute:Na+ symporter permease transmembrane protein rsc1951 or rs03525 SWALL:Q8XY12 (EMBL:AL646067) (688 aa) fasta scores: E(): 2.8e-156, 62.25% id in 673 aa, and to Alcaligenes eutrophus hypothetical protein in acoE 3'region SWALL:YACO_ALCEU (SWALL:P31640) (332 aa) fasta scores: E(): 1e-66, 59.31% id in 322 aa; transport related membrane protein 516820..518835 Burkholderia pseudomallei K96243 3095646 YP_110398.1 CDS BPSS0378 NC_006351.1 519142 520371 D Similar to Escherichia coli prophage CP4-57 integrase IntA or SlpA or IntX or b2622 SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 2.6e-30, 31.07% id in 399 aa, and to Ralstonia solanacearum integrase prophage protein rsc1896 or rs03460 SWALL:Q8XY67 (EMBL:AL646067) (411 aa) fasta scores: E(): 2.3e-67, 49.59% id in 373 aa; phage integrase 519142..520371 Burkholderia pseudomallei K96243 3095647 YP_110399.1 CDS BPSS0379 NC_006351.1 520625 520948 D hypothetical protein 520625..520948 Burkholderia pseudomallei K96243 3095528 YP_110400.1 CDS BPSS0380 NC_006351.1 521079 521324 D Similar to Bacillus subtilis BglII control element BglIIC SWALL:Q45487 (EMBL:U49842) (77 aa) fasta scores: E(): 3e-06, 40.98% id in 61 aa, and to Salmonella enterica, and Salmonella paratyphi-A regulatory protein SbaIC SWALL:Q9EZ27 (EMBL:AF508974) (78 aa) fasta scores: E(): 4.9e-06, 44.44% id in 72 aa. Note: Also similar to BPSS0381 (82 aa) fasta scores: E(): 2.7e-27, 88.889% identity in 81 aa overlap; DNA-binding regulatory protein 521079..521324 Burkholderia pseudomallei K96243 3096320 YP_110401.1 CDS BPSS0380A NC_006351.1 521382 521678 R Doubtful CDS. No significant database matches; hypothetical protein complement(521382..521678) Burkholderia pseudomallei K96243 3096321 YP_110402.1 CDS BPSS0380B NC_006351.1 521774 522100 R Doubtful CDS. No significant database matches; hypothetical protein complement(521774..522100) Burkholderia pseudomallei K96243 3095898 YP_110403.1 CDS BPSS0381 NC_006351.1 522475 522720 D Similar to Bacillus subtilis BglII control element BglIIC SWALL:Q45487 (EMBL:U49842) (77 aa) fasta scores: E(): 1.2e-05, 37.7% id in 61 aa, and to Salmonella enterica, and Salmonella paratyphi-a regulatory protein SbaIC SWALL:Q9EZ27 (EMBL:AF508974) (78 aa) fasta scores: E(): 1.2e-05, 38.88% id in 72 aa. Note: Also similar to BPSS0380 (82 aa) fasta scores: E(): 6.3e-28, 88.889% identity in 81 aa overlap; DNA-binding regulatory protein 522475..522720 Burkholderia pseudomallei K96243 3095662 YP_110404.1 CDS BPSS0382 NC_006351.1 522852 525719 R Similar in its N-terminal region to Escherichia coli DNA primase TraC SWALL:TRC4_ECOLI (SWALL:P27189) (1061 aa) fasta scores: E(): 5.5e-22, 32.87% id in 362 aa, and in its C-terminal region to Salmonella typhimurium inner membrane protein stm2745 SWALL:Q8ZMQ9 (EMBL:AE008824) (689 aa) fasta scores: E(): 2.7e-61, 33.57% id in 691 aa. Note: Also similar to BPSL0082 (956 aa) fasta scores: E(): 0, 91.832% identity in 955 aa overlap; hypothetical protein complement(522852..525719) Burkholderia pseudomallei K96243 3095663 YP_110405.1 CDS BPSS0383 NC_006351.1 526300 526518 R Similar to Yersinia pestis regulatory protein ypo0878 or y3260 SWALL:Q8ZHL3 (EMBL:AJ414145) (66 aa) fasta scores: E(): 8.5e-05, 42% id in 50 aa, and to Vibrio cholerae transcriptional regulator vc1785 SWALL:Q9KR58 (EMBL:AE004255) (68 aa) fasta scores: E(): 8.8e-05, 37.03% id in 54 aa; DNA-binding protein complement(526300..526518) Burkholderia pseudomallei K96243 3096182 YP_110406.1 CDS BPSS0384 NC_006351.1 526611 527657 R hypothetical protein complement(526611..527657) Burkholderia pseudomallei K96243 3095809 YP_110407.1 CDS BPSS0384A NC_006351.1 527939 528640 R hypothetical protein complement(527939..528640) Burkholderia pseudomallei K96243 3095810 YP_110408.1 CDS BPSS0385 NC_006351.1 529868 532291 D hypothetical protein 529868..532291 Burkholderia pseudomallei K96243 3096240 YP_110409.1 CDS tnpR NC_006351.1 532668 533243 D Similar to Escherichia coli transposon tn2501 resolvase TnpR SWALL:TNR0_ECOLI (SWALL:P05823) (194 aa) fasta scores: E(): 6.7e-43, 67.02% id in 188 aa, and to Salmonella typhimurium DNA-invertase Hin or stm2772 SWALL:HIN_SALTY (SWALL:P03013) (190 aa) fasta scores: E(): 4.3e-17, 37.7% id in 183 aa; transposon Tn2501 resolvase 532668..533243 Burkholderia pseudomallei K96243 3096862 YP_110410.1 CDS BPSS0387 NC_006351.1 533314 534429 R Similar to Burkholderia thailandensis bacteriophage phiE125 protein Gp31 SWALL:Q8VP95 (EMBL:AY063741) (363 aa) fasta scores: E(): 2.3e-32, 36.74% id in 362 aa; hypothetical protein complement(533314..534429) Burkholderia pseudomallei K96243 3095778 YP_110411.1 CDS BPSS0388 NC_006351.1 534439 535173 R Similar to Burkholderia thailandensis bacteriophage phiE125 protein Gp30 SWALL:Q8VP96 (EMBL:AY063741) (244 aa) fasta scores: E(): 7.1e-27, 42.04% id in 245 aa; hypothetical protein complement(534439..535173) Burkholderia pseudomallei K96243 3095779 YP_110412.1 CDS BPSS0389 NC_006351.1 535170 535697 R Similar to Burkholderia thailandensis bacteriophage phiE125 protein Gp29 SWALL:Q8VP97 (EMBL:AY063741) (186 aa) fasta scores: E(): 4.1e-35, 60.77% id in 181 aa; hypothetical protein complement(535170..535697) Burkholderia pseudomallei K96243 3096011 YP_110413.1 CDS BPSS0390 NC_006351.1 535977 536156 D Similar to Rhizobium meliloti hypothetical protein r02039 or smc04441 SWALL:Q92K60 (EMBL:AL591789) (62 aa) fasta scores: E(): 1.9e-11, 61.01% id in 59 aa, and to Clostridium perfringens hypothetical protein pcp27 SWALL:Q93MC0 (EMBL:AP003515) (65 aa) fasta scores: E(): 6.2e-11, 53.44% id in 58 aa; hypothetical protein 535977..536156 Burkholderia pseudomallei K96243 3096766 YP_110414.1 CDS BPSS0391 NC_006351.1 536201 536617 D Similar to Bacteriophage HP1 hypothetical 14.9 kDa protein in rep-hol intergenic region SWALL:YO14_BPHP1 (SWALL:P51716) (133 aa) fasta scores: E(): 8.8e-14, 38.34% id in 133 aa, and to Rhizobium loti hypothetical protein mlr2150 SWALL:Q98J17 (EMBL:AP002999) (133 aa) fasta scores: E(): 2.2e-11, 40.32% id in 124 aa; hypothetical protein 536201..536617 Burkholderia pseudomallei K96243 3096767 YP_110415.1 CDS BPSS0391A NC_006351.1 537046 537543 R hypothetical protein complement(537046..537543) Burkholderia pseudomallei K96243 3095962 YP_110416.1 CDS BPSS0394 NC_006351.1 539214 539498 R C-terminus is similar to the C-terminal region of Rhizobium meliloti hypothetical protein r00618 or smc04432 SWALL:Q92KN5 (EMBL:AL591784) (105 aa) fasta scores: E(): 6.9e-07, 52.63% id in 57 aa. Similar to Yersinia pestis hypothetical protein ypo1882 or y2427 SWALL:Q8ZF36 (EMBL:AJ414150) (96 aa) fasta scores: E(): 1e-06, 41.57% id in 89 aa; hypothetical protein complement(539214..539498) Burkholderia pseudomallei K96243 3095317 YP_110417.1 CDS BPSS0395 NC_006351.1 539482 539703 R Low similarity in its C-termianl region to Xylella fastidiosa hypothetical protein xf1562 SWALL:Q9PD18 (EMBL:AE003986) (88 aa) fasta scores: E(): 7.9e-07, 52.94% id in 51 aa; hypothetical protein complement(539482..539703) Burkholderia pseudomallei K96243 3096308 YP_110418.1 CDS BPSS0396 NC_006351.1 540323 540598 D Similar to Bacteriophage phiE125 Gp49 SWALL:Q8W6Q1 (EMBL:AF447491) (91 aa) fasta scores: E(): 3.7e-34, 95.6% id in 91 aa; bacteriophage protein Gp49 540323..540598 Burkholderia pseudomallei K96243 3096309 YP_110419.1 CDS BPSS0397 NC_006351.1 540608 540739 D Similar to Bacteriophage phiE125 Gp48 SWALL:Q8W6Q2 (EMBL:AF447491) (43 aa) fasta scores: E(): 1.5e-15, 97.67% id in 43 aa; bacteriophage protein Gp48 540608..540739 Burkholderia pseudomallei K96243 3096131 YP_110420.1 CDS BPSS0397A NC_006351.1 540741 540848 D hypothetical protein 540741..540848 Burkholderia pseudomallei K96243 3095709 YP_110421.1 CDS BPSS0398 NC_006351.1 540875 541096 D hypothetical protein 540875..541096 Burkholderia pseudomallei K96243 3095710 YP_110422.1 CDS BPSS0399 NC_006351.1 541081 541347 R Similar to Bacteriophage phiE125 Gp46 SWALL:Q8W6Q4 (EMBL:AF447491) (84 aa) fasta scores: E(): 2.9e-34, 95.23% id in 84 aa; bacteriophage protein Gp46 complement(541081..541347) Burkholderia pseudomallei K96243 3095803 YP_110423.1 CDS BPSS0400 NC_006351.1 541537 542235 R Low similarity in parts to Bacteriophage phiE125 Gp45 SWALL:Q8W6Q5 (EMBL:AF447491) (217 aa) fasta scores: E(): 0.12, 34.78% id in 115 aa; bacteriophage protein complement(541537..542235) Burkholderia pseudomallei K96243 3096992 YP_110424.1 CDS BPSS0401 NC_006351.1 542377 542526 D Identical to Bacteriophage phiE125 Gp44 SWALL:Q8W6Q6 (EMBL:AF447491) (49 aa) fasta scores: E(): 8.1e-19, 100% id in 49 aa; bacteriophage protein Gp44 542377..542526 Burkholderia pseudomallei K96243 3096993 YP_110425.1 CDS BPSS0402 NC_006351.1 542523 543698 D Probable fusion protein. N-terminal region highly similar to Bacteriophage phiE125 Gp43 SWALL:Q8W6Q7 (EMBL:AF447491) (270 aa) fasta scores: E(): 5e-90, 99.61% id in 258 aa, and C-terminal region to Pseudomonas putida transposase, ORFB pp4420 SWALL:AAN69997 (EMBL:AE016790) (269 aa) fasta scores: E(): 1.3e-18, 48.07% id in 156 aa; N-terminal region highly similar to Bacteriophage phiE125 Gp43 SWALL:Q8W6Q7 (EMBL:AF447491) (270 aa) fasta scores: E(): 5e-90, 99.61% id in 258 aa, and C-terminal region to Pseudomonas putida transposase, ORFB pp4420 SWALL:AAN69997 (EMBL:AE016790) (269 aa) fasta scores: E(): 1.3e-18, 48.07% id in 156 aa; bacteriophage/transposase fusion protein 542523..543698 Burkholderia pseudomallei K96243 3096158 YP_110426.1 CDS BPSS0403 NC_006351.1 544679 546139 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2492 or rs01104 SWALL:Q8XWI2 (EMBL:AL646070) (502 aa) fasta scores: E(): 1.1e-131, 66.73% id in 490 aa, and N-terminal region to Wolbachia sp. Wri phosphoprotein phosphatase SWALL:Q9RBM2 (EMBL:AJ012073) (428 aa) fasta scores: E(): 7.3e-21, 29.89% id in 368 aa. Note: Also similar to BPSS1331 (516 aa) fasta scores: E(): 1.2e-154, 87.866% identity in 478 aa overlap; hypothetical protein 544679..546139 Burkholderia pseudomallei K96243 3096153 YP_110427.1 CDS BPSS0404 NC_006351.1 546190 547560 D Similar to Paracoccus denitrificans methylamine utilization protein precursor MauG SWALL:MAUG_PARDE (SWALL:Q51658) (387 aa) fasta scores: E(): 4.3e-18, 34.41% id in 369 aa, and to Rhizobium loti methylamine utilization protein mlr1826 SWALL:Q98JQ7 (EMBL:AP002998) (437 aa) fasta scores: E(): 1.8e-46, 40.57% id in 419 aa. Possible alternative translational start site; methylamine utilization protein 546190..547560 Burkholderia pseudomallei K96243 3095078 YP_110428.1 CDS BPSS0405 NC_006351.1 547717 548649 D Similar to Mycobacterium tuberculosis hypothetical protein precursor rv2277c or mt2337 or mtcy339.33 SWALL:YM77_MYCTU (SWALL:Q50687) (301 aa) fasta scores: E(): 2.3e-38, 40.53% id in 301 aa, and to Yersinia pestis exported protein ypo3232 or y0958 SWALL:Q8ZBZ8 (EMBL:AJ414156) (315 aa) fasta scores: E(): 5.7e-29, 49.16% id in 299 aa; glycerophosphoryl diester phosphodiesterase 547717..548649 Burkholderia pseudomallei K96243 3095079 YP_110429.1 CDS BPSS0406 NC_006351.1 548847 549050 D No significant database matches. Doubtful CDS; hypothetical protein 548847..549050 Burkholderia pseudomallei K96243 3096291 YP_110430.1 CDS BPSS0407 NC_006351.1 549075 549788 D Similar to Rhodobacter capsulatus insertion element SWALL:O68064 (EMBL:AF010496) (191 aa) fasta scores: E(): 4e-49, 68.68% id in 182 aa, and to Ralstonia solanacearum ISrso14-transposase ORFB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 1.7e-11, 34.18% id in 234 aa. Note: Also similar in its N-terminal region to BPSS0661 (276 aa) fasta scores: E(): 5.1e-52, 97.143% identity in 140 aa overlap and in its C-terminal region to BPSS0662 (59 aa) fasta scores: E(): 3.6e-18, 96.429% identity in 56 aa overlap; insertion element hypothetical protein 549075..549788 Burkholderia pseudomallei K96243 3096252 YP_110431.1 CDS BPSS0408 NC_006351.1 549815 550549 R hypothetical protein complement(549815..550549) Burkholderia pseudomallei K96243 3096253 YP_110432.1 CDS BPSS0409 NC_006351.1 550540 562935 R hypothetical protein complement(550540..562935) Burkholderia pseudomallei K96243 3095229 YP_110433.1 CDS BPSS0410 NC_006351.1 562919 566497 R hypothetical protein complement(562919..566497) Burkholderia pseudomallei K96243 3095739 YP_110434.1 CDS BPSS0411 NC_006351.1 566615 567391 R hypothetical protein complement(566615..567391) Burkholderia pseudomallei K96243 3095740 YP_110435.1 CDS BPSS0412 NC_006351.1 567424 567849 R hypothetical protein complement(567424..567849) Burkholderia pseudomallei K96243 3096994 YP_110436.1 CDS BPSS0413 NC_006351.1 568385 568792 D hypothetical protein 568385..568792 Burkholderia pseudomallei K96243 3095519 YP_110437.1 CDS BPSS0414 NC_006351.1 569031 570743 D Similar to Caulobacter crescentus acetolactate synthase, large subunit cc2100 SWALL:Q9A6J3 (EMBL:AE005883) (582 aa) fasta scores: E(): 3.3e-53, 36.34% id in 575 aa, and to Bacillus subtilis acetolactate synthase large subunit IlvB SWALL:ILVB_BACSU (SWALL:P37251) (573 aa) fasta scores: E(): 7.6e-53, 33.74% id in 572 aa; acetolactate synthase 569031..570743 Burkholderia pseudomallei K96243 3095520 YP_110438.1 CDS BPSS0415 NC_006351.1 570903 573890 R Similar to Salmonella typhimurium outer membrane lipoprotein YjbH or stm4225 SWALL:Q8ZKI1 (EMBL:AE008897) (698 aa) fasta scores: E(): 2.6e-34, 40.08% id in 726 aa, and to Escherichia coli hypothetical lipoprotein precursor YmcA or b0984 SWALL:YMCA_ECOLI (SWALL:P75882) (698 aa) fasta scores: E(): 4.8e-33, 39.68% id in 693 aa. Note: N-terminal region presents no similarities to any database entries; lipoprotein complement(570903..573890) Burkholderia pseudomallei K96243 3097192 YP_110439.1 CDS BPSS0416 NC_006351.1 573892 574536 R lipoprotein complement(573892..574536) Burkholderia pseudomallei K96243 3096119 YP_110440.1 CDS BPSS0416A NC_006351.1 574629 574985 D hypothetical protein 574629..574985 Burkholderia pseudomallei K96243 3096120 YP_110441.1 CDS BPSS0417 NC_006351.1 575855 578407 D C-terminus is weakly similar to the C-terinal region of Escherichia coli polysialic acid transport protein precursor KpsD SWALL:KSD1_ECOLI (SWALL:Q03961) (558 aa) fasta scores: E(): 1.4e-09, 25.1% id in 458 aa, and to Shewanella oneidensis polysaccharide biosynthesis protein so3193 SWALL:AAN56193 (EMBL:AE015757) (921 aa) fasta scores: E(): 5.3e-26, 26.41% id in 863 aa; hypothetical protein 575855..578407 Burkholderia pseudomallei K96243 3096557 YP_110442.1 CDS BPSS0418 NC_006351.1 578412 579629 D Similar to Escherichia coli, and Escherichia coli O6 capsule polysaccharide export inner-membrane protein KpsE or c3687 SWALL:KSE5_ECOLI (SWALL:P42214) (382 aa) fasta scores: E(): 0.00055, 22.35% id in 340 aa, and to Ralstonia solanacearum tyrosine-protein kinase EpsB SWALL:EPB2_RALSO (SWALL:Q45409) (750 aa) fasta scores: E(): 7.4e-06, 25.16% id in 302 aa. Note: The N-terminal region does not seem to present any similarities with database entries. Possible alternative translational start site; transport-related membrane protein 578412..579629 Burkholderia pseudomallei K96243 3095946 YP_110443.1 CDS rfbF NC_006351.1 579626 580402 D Similar to Salmonella typhimurium glucose-1-phosphate cytidylyltransferase RfbF or stm2092 SWALL:RFBF_SALTY (SWALL:P26396) (257 aa) fasta scores: E(): 4e-73, 68.09% id in 257 aa, and to Yersinia enterocolitica DdhA SWALL:Q56860 (EMBL:U46859) (261 aa) fasta scores: E(): 9e-74, 66.14% id in 257 aa; glucose-1-phosphate cytidylyltransferase 579626..580402 Burkholderia pseudomallei K96243 3095925 YP_110444.1 CDS rfbG NC_006351.1 580405 581478 D Similar to Salmonella typhimurium CDP-glucose 4,6-dehydratase RfbG or stm2091 SWALL:RFBG_SALTY (SWALL:P26397) (359 aa) fasta scores: E(): 2.3e-85, 55.55% id in 351 aa, and to Yersinia pseudotuberculosis CDP-D-glucose-4,6-dehydratase AscB or DdhB SWALL:Q57329 (EMBL:L33181) (357 aa) fasta scores: E(): 8.7e-88, 58.33% id in 348 aa; CDP-glucose 4,6-dehydratase 580405..581478 Burkholderia pseudomallei K96243 3095700 YP_110445.1 CDS rfbH NC_006351.1 581486 582838 D Similar to Salmonella typhimurium lipopolysaccharide biosynthesis protein RfbH or stm2090 SWALL:RFBH_SALTY (SWALL:P26398) (437 aa) fasta scores: E(): 4.6e-120, 64.45% id in 436 aa, and to Yersinia pseudotuberculosis, and Yersinia pseudotuberculosis CDP-4-keto-6-deoxy-D-glucose-3-dehydrase DdhC SWALL:Q05341 (EMBL:AF461770) (437 aa) fasta scores: E(): 1.3e-119, 65.13% id in 436 aa; lipopolysaccharide biosynthesis protein 581486..582838 Burkholderia pseudomallei K96243 3095701 YP_110446.1 CDS BPSS0422 NC_006351.1 582864 584624 D C-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 perosamine synthetase Per or RfbE or z3200 or ecs2841 SWALL:O07849 (EMBL:AF061251) (366 aa) fasta scores: E(): 3.5e-50, 38.76% id in 356 aa and N-terminal region similar to Agrobacterium tumefaciens acetyltransferase atu2080 or agr_c_3768 SWALL:Q8UDP1 (EMBL:Q8UDP1) (177 aa) blastp scores: Score = 39.9 bits (91), Expect = 0.14 Identities = 46/165 (27%), Positives = 70/165 (41%), Gaps = 18/165 (10%); aminotransferase 582864..584624 Burkholderia pseudomallei K96243 3095947 YP_110447.1 CDS BPSS0423 NC_006351.1 584873 586228 D Similar to Salmonella enterica hypothetical protein with 12 predicted transmembrane segments which possibly functions in export of O-antigen SWALL:Q00339 (EMBL:X61917) (446 aa) fasta scores: E(): 2e-39, 30.15% id in 441 aa, and to Sphingomonas sp. S88 hypothetical 47.3 kDa protein SpsS SWALL:P74815 (EMBL:U51197) (452 aa) fasta scores: E(): 1.5e-05, 26.01% id in 469 aa; hypothetical protein 584873..586228 Burkholderia pseudomallei K96243 3096628 YP_110448.1 CDS BPSS0424 NC_006351.1 586225 587286 D Similar to Salmonella enterica WbaR protein SWALL:Q00337 (EMBL:X61917) (320 aa) fasta scores: E(): 1.1e-15, 32.25% id in 248 aa, and low similarity to Salmonella typhimurium O antigen biosynthesis abequosyltransferase RfbV or stm2087 SWALL:RFBV_SALTY (SWALL:P26401) (333 aa) fasta scores: E(): 0.00069, 26.54% id in 275 aa; glycosyl transferase 586225..587286 Burkholderia pseudomallei K96243 3096227 YP_110449.1 CDS BPSS0425 NC_006351.1 587459 588715 D Similar to Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or Rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 7.8e-07, 26.45% id in 310 aa, and to Rhizobium loti ADP-heptose-LPS heptosyltransferase mlr2566 SWALL:Q98I51 (EMBL:AP003000) (335 aa) fasta scores: E(): 1.8e-15, 26.87% id in 346 aa; heptosyltransferase (O-antigen related) 587459..588715 Burkholderia pseudomallei K96243 3096228 YP_110450.1 CDS BPSS0426 NC_006351.1 588621 589676 D Similar to Escherichia coli WaaQ SWALL:Q9R9D5 (EMBL:AF019746) (340 aa) fasta scores: E(): 4.7e-06, 22.68% id in 335 aa, and to Neisseria gonorrhoeae ADP-heptose:LPS heptosyltransferase II RfaF SWALL:Q51063 (EMBL:Z37141) (336 aa) fasta scores: E(): 5.8e-09, 24.92% id in 349 aa; heptosyltransferase (O-antigen related) 588621..589676 Burkholderia pseudomallei K96243 3095452 YP_110451.1 CDS BPSS0427 NC_006351.1 589669 590238 D Similar to Escherichia coli lipopolysaccharide biosynthesis O-acetyl transferase WbbJ or b2033 SWALL:WBBJ_ECOLI (SWALL:P37750) (196 aa) fasta scores: E(): 4.5e-09, 36.06% id in 122 aa, and to Aeromonas hydrophila O-acetyl transferase SWALL:AAM74482 (EMBL:AF148126) (199 aa) fasta scores: E(): 2.2e-11, 31.6% id in 174 aa; O-acetyl transferase 589669..590238 Burkholderia pseudomallei K96243 3096167 YP_110452.1 CDS BPSS0428 NC_006351.1 590250 591296 D Similar to Salmonella enterica rhamnosyl transferase SWALL:Q00482 (EMBL:X61917) (347 aa) fasta scores: E(): 4.6e-25, 30.03% id in 323 aa, and to Salmonella typhimurium O antigen biosynthesis abequosyltransferase RfbV or stm2087 SWALL:RFBV_SALTY (SWALL:P26401) (333 aa) fasta scores: E(): 0.00046, 23.58% id in 229 aa; glycosyl transferase (O-antigen related) 590250..591296 Burkholderia pseudomallei K96243 3096168 YP_110453.1 CDS BPSS0429 NC_006351.1 591300 592349 D hypothetical protein 591300..592349 Burkholderia pseudomallei K96243 3095791 YP_110454.1 CDS BPSS0431 NC_006351.1 593393 594292 R Similar to Pseudomonas putida transcriptional regulator, LysR family pp3811 SWALL:AAN69405 (EMBL:AE016788) (294 aa) fasta scores: E(): 9.2e-52, 50% id in 288 aa, and to Bradyrhizobium japonicum transcriptional regulatory protein blr6553 SWALL:BAC51818 (EMBL:AP005959) (323 aa) fasta scores: E(): 8.9e-39, 41.69% id in 295 aa; LysR family transcriptional regulator complement(593393..594292) Burkholderia pseudomallei K96243 3095206 YP_110455.1 CDS BPSS0432 NC_006351.1 594422 595147 D Similar to Escherichia coli protein YhhW or b3439 SWALL:YHHW_ECOLI (SWALL:P46852) (231 aa) fasta scores: E(): 2.7e-42, 49.57% id in 234 aa, and to Xanthomonas axonopodis hypothetical protein xac1747 SWALL:AAM36613 (EMBL:AE011806) (233 aa) fasta scores: E(): 2.7e-52, 58.44% id in 231 aa; hypothetical protein 594422..595147 Burkholderia pseudomallei K96243 3095207 YP_110456.1 CDS BPSS0433 NC_006351.1 595429 596109 D Highly similar in its N-terminal region to Rhizobium loti hypothetical protein mlr1837 SWALL:Q98JQ1 (EMBL:AP002998) (143 aa) fasta scores: E(): 2.3e-30, 68.08% id in 141 aa, and similar in its full length to Ralstonia solanacearum permease transmembrane protein rsc0238 or rs00670 SWALL:Q8Y2U4 (EMBL:AL646058) (236 aa) fasta scores: E(): 6.9e-20, 39.42% id in 208 aa; hypothetical protein 595429..596109 Burkholderia pseudomallei K96243 3096715 YP_110457.1 CDS BPSS0434 NC_006351.1 596139 597170 R Low similarity to Xanthomonas axonopodis thioredoxin reductase TrxB or xac1182 SWALL:AAM36054 (EMBL:AE011747) (365 aa) fasta scores: E(): 9.5e-05, 28.67% id in 286 aa; hypothetical protein complement(596139..597170) Burkholderia pseudomallei K96243 3096035 YP_110458.1 CDS BPSS0435 NC_006351.1 597509 598435 D C-terminus is similar to the C-terminal regions of Rhizobium loti probable transcriptional regulator mll0489 SWALL:Q98MP6 (EMBL:AP002995) (313 aa) fasta scores: E(): 5.7e-24, 36.29% id in 259 aa, and Pseudomonas aeruginosa probable transcriptional regulator pa2696 SWALL:Q9I0E6 (EMBL:AE004697) (297 aa) fasta scores: E(): 5.5e-20, 34.07% id in 226 aa; AraC family transcriptional regulator 597509..598435 Burkholderia pseudomallei K96243 3096036 YP_110459.1 CDS BPSS0436 NC_006351.1 598494 599396 R Similar to Rhizobium leguminosarum arac-like transcriptional regulator SWALL:Q93EA6 (EMBL:AF361470) (303 aa) fasta scores: E(): 1.6e-38, 38.92% id in 298 aa, and to Rhizobium leguminosarum arac-like transcriptional regulator SWALL:Q93EA7 (EMBL:AF361470) (306 aa) fasta scores: E(): 3.7e-14, 26.88% id in 305 aa; AraC family transcriptional regulator complement(598494..599396) Burkholderia pseudomallei K96243 3096505 YP_110460.1 CDS BPSS0437 NC_006351.1 599746 600948 R Similar to Rhizobium loti hypothetical protein mll3464 SWALL:Q98G70 (EMBL:AP003002) (405 aa) fasta scores: E(): 1.3e-54, 44.63% id in 401 aa, and to Xanthomonas campestris MFS transporter xcc0495 SWALL:AAM39811 (EMBL:AE012146) (396 aa) fasta scores: E(): 3.3e-42, 39.23% id in 390 aa; transporter protein complement(599746..600948) Burkholderia pseudomallei K96243 3095580 YP_110461.1 CDS BPSS0438 NC_006351.1 601354 602265 D Similar to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 5.5e-53, 49.5% id in 303 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0056 SWALL:Q9I776 (EMBL:AE004445) (306 aa) fasta scores: E(): 3.5e-30, 35.43% id in 302 aa; LysR family transcriptional regulator 601354..602265 Burkholderia pseudomallei K96243 3095581 YP_110462.1 CDS BPSS0439 NC_006351.1 602395 603081 R Similar to Ralstonia solanacearum hydrolase rsc0242 or rs00674 SWALL:Q8Y2U0 (EMBL:AL646058) (228 aa) fasta scores: E(): 2.4e-77, 85.9% id in 227 aa, and to Rhizobium meliloti hydrolase ra0202 or sma0376 SWALL:Q930J3 (EMBL:AE007213) (229 aa) fasta scores: E(): 5.6e-68, 78.94% id in 228 aa; hypothetical protein complement(602395..603081) Burkholderia pseudomallei K96243 3096171 YP_110463.1 CDS BPSS0440 NC_006351.1 603608 603922 D Similar to Xanthomonas campestris hypothetical protein xcc2052 SWALL:Q8P914 (EMBL:AE012311) (102 aa) fasta scores: E(): 9.2e-19, 62.13% id in 103 aa, and to Rhizobium leguminosarum hypothetical 10.3 kDa protein SWALL:Q93EB2 (EMBL:AF361470) (96 aa) fasta scores: E(): 7.9e-15, 56.38% id in 94 aa; hypothetical protein 603608..603922 Burkholderia pseudomallei K96243 3095827 YP_110464.1 CDS BPSS0441 NC_006351.1 603915 605813 D Similar to Agrobacterium tumefaciens hypothetical protein atu3982 or agr_l_1745 SWALL:Q8U8V6 (EMBL:AE009329) (625 aa) fasta scores: E(): 1.1e-204, 79.32% id in 624 aa, and to Ralstonia solanacearum hypothetical protein rsc0239 or rs00671 SWALL:Q8Y2U3 (EMBL:AL646058) (612 aa) fasta scores: E(): 7e-154, 65.59% id in 625 aa; hypothetical protein 603915..605813 Burkholderia pseudomallei K96243 3095828 YP_110465.1 CDS BPSS0442 NC_006351.1 605992 607227 D C-terminal region similar to C-terminal region of Xanthomonas campestris hypothetical protein xcc2051 SWALL:Q8P915 (EMBL:AE012311) (403 aa) fasta scores: E(): 4e-61, 63.57% id in 280 aa, and similar in its C-terminal region to the full length of Bradyrhizobium japonicum protein blr4261 SWALL:BAC49526 (EMBL:AP005950) (310 aa) fasta scores: E(): 1.4e-60, 59.04% id in 293 aa, N-terminal region similar to Streptomyces coelicolor hypothetical protein sco0467 or scf76.07 SWALL:Q9RJG7 (EMBL:Q9RJG7) blastp scores: Score = 49.2 bits (115), Expect = 1e-04 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%); hypothetical protein 605992..607227 Burkholderia pseudomallei K96243 3096163 YP_110466.1 CDS BPSS0443 NC_006351.1 607554 608903 D Similar to Xanthomonas campestris hypothetical protein xcc2050 SWALL:AAM41339 (EMBL:AE012311) (463 aa) fasta scores: E(): 4.3e-106, 57.7% id in 435 aa, and to Zymomonas mobilis hypothetical 54.0 kDa protein SWALL:Q9RQC9 (EMBL:AF117351) (483 aa) fasta scores: E(): 1.2e-07, 24.41% id in 340 aa; hypothetical protein 607554..608903 Burkholderia pseudomallei K96243 3096263 YP_110467.1 CDS cpo NC_006351.1 609469 610290 D Similar to Pseudomonas fluorescens non-heme chloroperoxidase Cpo or CpoF SWALL:PRXC_PSEFL (SWALL:O31158) (273 aa) fasta scores: E(): 2.3e-73, 67.77% id in 270 aa, and to Burkholderia cepacia chloride peroxidase SWALL:Q8VT61 (EMBL:AF335493) (273 aa) fasta scores: E(): 1.2e-86, 78.59% id in 271 aa; non-heme chloroperoxidase 609469..610290 Burkholderia pseudomallei K96243 3096545 YP_110468.1 CDS BPSS0446 NC_006351.1 611180 611809 D Similar to Xanthomonas axonopodis hypothetical protein xac0432 SWALL:Q8PQ96 (EMBL:AE011670) (226 aa) fasta scores: E(): 1.2e-40, 57.61% id in 210 aa, and to Pseudomonas aeruginosa hypothetical protein pa4017 SWALL:Q9HX10 (EMBL:AE004818) (213 aa) fasta scores: E(): 4.1e-21, 42.1% id in 209 aa; hypothetical protein 611180..611809 Burkholderia pseudomallei K96243 3096419 YP_110469.1 CDS BPSS0447 NC_006351.1 612507 613112 D Similar to Escherichia coli hypothetical protein YddH or b1462 SWALL:YDDH_ECOLI (SWALL:P76121) (189 aa) fasta scores: E(): 2.5e-22, 38.42% id in 190 aa, and to Xanthomonas campestris hypothetical protein xcc3203 SWALL:AAM42473 (EMBL:AE012437) (193 aa) fasta scores: E(): 6.4e-08, 28.49% id in 179 aa; hypothetical protein 612507..613112 Burkholderia pseudomallei K96243 3096744 YP_110470.1 CDS BPSS0448 NC_006351.1 613249 613701 R hypothetical protein complement(613249..613701) Burkholderia pseudomallei K96243 3095892 YP_110471.1 CDS BPSS0449 NC_006351.1 613963 615297 R Similar to Rhodobacter sphaeroides hypothetical transcriptional regulator in rdxA 3'region SWALL:YRDX_RHOSH (SWALL:Q01856) (456 aa) fasta scores: E(): 1.1e-45, 37.81% id in 439 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2100 SWALL:Q9I215 (EMBL:AE004637) (477 aa) fasta scores: E(): 6.5e-43, 35.46% id in 423 aa; GntR family transcriptional regulator complement(613963..615297) Burkholderia pseudomallei K96243 3095893 YP_110472.1 CDS BPSS0450 NC_006351.1 615386 616003 D Similar to Methanosarcina mazei transcriptional regulator, AraC family mm3310 SWALL:AAM33006 (EMBL:AE013592) (209 aa) fasta scores: E(): 6.8e-05, 26.92% id in 208 aa, and to parts of Xanthomonas campestris thiJ/pfpI family protein xcc3565 SWALL:AAM42835 (EMBL:AE012477) (257 aa) fasta scores: E(): 5.9e-07, 29.37% id in 177 aa; DJ-1/PfpI family protein 615386..616003 Burkholderia pseudomallei K96243 3096732 YP_110473.1 CDS BPSS0451 NC_006351.1 616361 617449 R C-terminal region is similar to Escherichia coli, and Shigella flexneri penicillin-binding protein 7 precursor PbpG or b2134 or sf2219 or s2348 SWALL:PBP7_ECOLI (SWALL:P33364) (313 aa) fasta scores: E(): 2.9e-36, 46.69% id in 272 aa. Full length CDS is similar to Ralstonia solanacearum D-alanyl-D-alanine-endopeptidase rsc1609 or rs03972 SWALL:Q8XYZ7 (EMBL:AL646065) (375 aa) fasta scores: E(): 1.2e-51, 47.82% id in 345 aa; peptidase complement(616361..617449) Burkholderia pseudomallei K96243 3096655 YP_110474.1 CDS BPSS0452 NC_006351.1 618584 620524 D Similar in its N-terminal region to Thermoanaerobacter tengcongensis DNA polymerase IV Pol4 or tte2516 SWALL:Q8R7A2 (EMBL:AE013193) (570 aa) fasta scores: E(): 3.1e-74, 43.36% id in 565 aa, and to Bacillus halodurans DNA-dependent DNA polymerase beta chain bh3107 SWALL:Q9K899 (EMBL:AP001517) (571 aa) fasta scores: E(): 5.3e-63, 38.21% id in 581 aa. Note: This CDS presents no similarity to any of the database matches in its C-terminal region (from approx. residue 577 onwards); phosphoesterase 618584..620524 Burkholderia pseudomallei K96243 3096656 YP_110475.1 CDS BPSS0453 NC_006351.1 620793 621200 D hypothetical protein 620793..621200 Burkholderia pseudomallei K96243 3095839 YP_110476.1 CDS BPSS0454 NC_006351.1 621293 621589 D hypothetical protein 621293..621589 Burkholderia pseudomallei K96243 3095535 YP_110477.1 CDS BPSS0455 NC_006351.1 621586 623250 D Similar to Agrobacterium tumefaciens copper tolerance protein CopB or atu3992 or agr_l_1720 WALL:Q8U8U6 (EMBL:AE009330) (492 aa) fasta scores: E(): 1.1e-42, 40.04% id in 482 aa, and to Rhizobium meliloti hypothetical protein ra0562 or sma1037 SWALL:Q92ZC8 (EMBL:AE007246) (488 aa) fasta scores: E(): 3.4e-42, 39.17% id in 485 aa; copper resistance-related lipoprotein 621586..623250 Burkholderia pseudomallei K96243 3095536 YP_110478.1 CDS BPSS0456 NC_006351.1 623253 624548 D Similar to Bradyrhizobium japonicum multicopper oxidase CopA or bll2210 SWALL:BAC47475 (EMBL:AP005942) (445 aa) fasta scores: E(): 5.9e-124, 70.99% id in 424 aa, and low to the plasmid-borne Escherichia coli copper resistance protein A precursor PcoA SWALL:PCOA_ECOLI (SWALL:Q47452) (605 aa) fasta scores: E(): 2e-12, 26.94% id in 386 aa; exported copper oxidase 623253..624548 Burkholderia pseudomallei K96243 3096682 YP_110479.1 CDS BPSS0457 NC_006351.1 624667 625023 D Similar to Ralstonia solanacearum hypothetical signal peptide protein rsp0929 or rs05404 SWALL:Q8XRC9 (EMBL:AL646081) (114 aa) fasta scores: E(): 2.3e-10, 45.76% id in 118 aa, and to Rhizobium meliloti hypothetical signal peptide protein r00588 or smc02284 SWALL:Q92S41 (EMBL:AL591784) (94 aa) fasta scores: E(): 8.3e-08, 52% id in 75 aa; hypothetical protein 624667..625023 Burkholderia pseudomallei K96243 3096683 YP_110480.1 CDS BPSS0458 NC_006351.1 625073 625453 D Similar to Yersinia pestis copper resistance protein ypo1784 SWALL:Q8ZFD0 (EMBL:AJ414150) (128 aa) fasta scores: E(): 5e-10, 40.51% id in 116 aa, and to Escherichia coli copper resistance protein C precursor PcoC SWALL:PCOC_ECOLI (SWALL:Q47454) (126 aa) fasta scores: E(): 6.1e-05, 34.86% id in 109 aa; copper-resistance exported protein 625073..625453 Burkholderia pseudomallei K96243 3096033 YP_110481.1 CDS BPSS0459 NC_006351.1 625453 626397 D Similar to Ralstonia solanacearum probable copper resistance D transmembrane protein CopD or rsp0659 or rs01790 SWALL:Q8XS22 (EMBL:AL646080) (309 aa) fasta scores: E(): 2.3e-08, 30.88% id in 327 aa, and to Pseudomonas syringae copper resistance protein D copD SWALL:COPD_PSESF (SWALL:Q9KWM8) (311 aa) fasta scores: E(): 2.6e-08, 31.29% id in 262 aa; copper-resistance membrane protein 625453..626397 Burkholderia pseudomallei K96243 3095729 YP_110482.1 CDS BPSS0460 NC_006351.1 626698 628539 D Similar to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 1e-49, 43.19% id in 558 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis I CheD3 or rsp1406 or rs02052 SWALL:Q8XQ80 (EMBL:AL646084) (608 aa) fasta scores: E(): 1e-57, 44.6% id in 621 aa; methyl-accepting chemotaxis protein 626698..628539 Burkholderia pseudomallei K96243 3095730 YP_110483.1 CDS BPSS0461 NC_006351.1 628847 630139 R Similar to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 4.4e-61, 43.97% id in 423 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa5309 SWALL:Q9HTP5 (EMBL:AE004943) (439 aa) fasta scores: E(): 2e-73, 50% id in 436 aa; oxidoreductase complement(628847..630139) Burkholderia pseudomallei K96243 3095942 YP_110484.1 CDS BPSS0462 NC_006351.1 630210 631541 R Similar to Pseudomonas putida oxidoreductase, pp5273 SWALL:AAN70838 (EMBL:AE016793) (430 aa) fasta scores: E(): 5e-58, 42.51% id in 421 aa, and to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 1.7e-53, 38.42% id in 419 aa. Note: This CDS contains two possible alternative start codons at residues 5 and/or 14; oxidoreductase complement(630210..631541) Burkholderia pseudomallei K96243 3096800 YP_110485.1 CDS BPSS0463 NC_006351.1 631645 633219 R hypothetical protein complement(631645..633219) Burkholderia pseudomallei K96243 3096801 YP_110486.1 CDS potI NC_006351.1 633288 634217 R Similar to Escherichia coli, and Escherichia coli O6 putrescine transport system permease PotI or b0857 or c0990 SWALL:POTI_ECOLI (SWALL:P31136) (281 aa) fasta scores: E(): 2.4e-56, 58.86% id in 265 aa, and to Salmonella typhi putrescine transport system permease sty0913 SWALL:Q8Z843 (EMBL:AL627268) (281 aa) fasta scores: E(): 4.5e-55, 57.35% id in 265 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; putrescine transport system permease complement(633288..634217) Burkholderia pseudomallei K96243 3095862 YP_110487.1 CDS potH NC_006351.1 634214 635194 R Similar to Escherichia coli putrescine transport system permease PotH or b0856 SWALL:POTH_ECOLI (SWALL:P31135) (317 aa) fasta scores: E(): 8.1e-65, 55.98% id in 284 aa, and to Yersinia pestis putrescine transport system permease ypo1333 or y2848 SWALL:AAM86399 (EMBL:AJ414147) (321 aa) fasta scores: E(): 4.5e-67, 53.72% id in 322 aa. Note: This CDS has a possible aternative star codon at residue 44; putrescine ABC transport system, permease complement(634214..635194) Burkholderia pseudomallei K96243 3095901 YP_110488.1 CDS potG NC_006351.1 635191 636345 R Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 1.4e-71, 54.83% id in 372 aa, and to Neisseria meningitidis spermidine/putrescine ABC transporter ATP-binding protein nmb0610 SWALL:Q9K0I9 (EMBL:AE002416) (419 aa) fasta scores: E(): 1.4e-76, 56.38% id in 360 aa; putrescine ABC transporter ATP-binding protein complement(635191..636345) Burkholderia pseudomallei K96243 3095749 YP_110489.1 CDS potF NC_006351.1 636535 637656 R Similar to Escherichia coli putrescine-binding periplasmic protein precursor PotF or b0854 SWALL:POTF_ECOLI (SWALL:P31133) (370 aa) fasta scores: E(): 3.3e-67, 49.3% id in 357 aa, and to Pseudomonas aeruginosa polyamine transport protein pa0301 SWALL:Q9I6J0 (EMBL:AE004468) (365 aa) fasta scores: E(): 6.3e-69, 49.59% id in 367 aa. Possible alternative translational start site; putrescine ABC transporter binding exported protein complement(636535..637656) Burkholderia pseudomallei K96243 3095748 YP_110490.1 CDS BPSS0468 NC_006351.1 637724 639142 R Similar to Pseudomonas fluorescens BioA SWALL:Q9AH00 (EMBL:AF323694) (453 aa) fasta scores: E(): 1.1e-109, 58.29% id in 446 aa, and to Agrobacterium tumefaciens adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA or atu1002 or agr_c_1843 SWALL:Q8UGN4 (EMBL:AE009065) (484 aa) fasta scores: E(): 3.3e-101, 54.56% id in 438 aa; aminotransferase complement(637724..639142) Burkholderia pseudomallei K96243 3096129 YP_110491.1 CDS BPSS0469 NC_006351.1 639178 640512 R Similar to Xanthomonas campestris glutamine synthetase GlnA or xcc2346 SWALL:AAM41624 (EMBL:AE012342) (461 aa) fasta scores: E(): 6e-107, 58.63% id in 440 aa, and to Thermotoga maritima glutamine synthetase GlnA or tm0943 SWALL:GLNA_THEMA (SWALL:P36205) (439 aa) fasta scores: E(): 1.9e-29, 28.09% id in 420 aa; glutamine synthetase complement(639178..640512) Burkholderia pseudomallei K96243 3096236 YP_110492.1 CDS BPSS0470 NC_006351.1 640539 641339 R Similar to Pseudomonas aeruginosa probable glutamine amidotransferase pa0297 SWALL:Q9I6J4 (EMBL:AE004467) (250 aa) fasta scores: E(): 1.6e-48, 55.46% id in 247 aa, and to Escherichia coli O157:H7 probable amidotransferase subunit YcjL or z2490 or ecs1875 SWALL:Q8X7G2 (EMBL:AE005376) (258 aa) fasta scores: E(): 2e-31, 40.87% id in 252 aa; glutamine amidotransferase complement(640539..641339) Burkholderia pseudomallei K96243 3096237 YP_110493.1 CDS BPSS0471 NC_006351.1 641574 641981 D hypothetical protein 641574..641981 Burkholderia pseudomallei K96243 3096198 YP_110494.1 CDS BPSS0472 NC_006351.1 642281 642832 D Similar to Brucella melitensis transcriptional regulator, MerR family bmeii0372 SWALL:Q8YD05 (EMBL:AE009674) (182 aa) fasta scores: E(): 4.6e-32, 49.73% id in 185 aa, and to Shewanella oneidensis transcriptional regulator, so1265 SWALL:AAN54333 (EMBL:AE015570) (182 aa) fasta scores: E(): 2.1e-31, 53.29% id in 182 aa; MerR family transcriptional regulator 642281..642832 Burkholderia pseudomallei K96243 3096024 YP_110495.1 CDS BPSS0473 NC_006351.1 642950 644440 D Similar to Escherichia coli aldehyde dehydrogenase AldH or b1300 SWALL:DHAL_ECOLI (SWALL:P23883) (495 aa) fasta scores: E(): 8.7e-104, 54.52% id in 497 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa5312 SWALL:Q9HTP2 (EMBL:AE004944) (497 aa) fasta scores: E(): 5.9e-121, 62.65% id in 498 aa; aldehyde dehydrogenase 642950..644440 Burkholderia pseudomallei K96243 3096025 YP_110496.1 CDS speB NC_006351.1 644571 645533 D catalyzes the formation of putrescine from agmatine; agmatinase 644571..645533 Burkholderia pseudomallei K96243 3096391 YP_110497.1 CDS BPSS0475 NC_006351.1 645652 646065 D hypothetical protein 645652..646065 Burkholderia pseudomallei K96243 3095661 YP_110498.1 CDS groES NC_006351.1 646259 646549 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 646259..646549 Burkholderia pseudomallei K96243 3095051 YP_110499.1 CDS groEL NC_006351.1 646571 648211 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; molecular chaperone GroEL 646571..648211 Burkholderia pseudomallei K96243 3095050 YP_110500.1 CDS BPSS0478 NC_006351.1 648273 648719 R Similar to Pseudomonas aeruginosa hypothetical protein pa2757 SWALL:Q9I086 (EMBL:AE004703) (147 aa) fasta scores: E(): 3.2e-30, 55.47% id in 146 aa, and to Vitreoscilla sp. hypothetical 17.2 kDa protein SWALL:Q9XD48 (EMBL:AF114793) (152 aa) fasta scores: E(): 6.4e-21, 45.32% id in 139 aa; hypothetical protein complement(648273..648719) Burkholderia pseudomallei K96243 3095566 YP_110501.1 CDS BPSS0479 NC_006351.1 649327 651861 D Similar to Vaccinia virus ribonucleoside-diphosphate reductase large chain I4L SWALL:RIR1_VACCV (SWALL:P12848) (771 aa) fasta scores: E(): 2.8e-22, 25.22% id in 654 aa, and to Thermoanaerobacter tengcongensis ribonucleotide reductase alpha subunit tte2336 SWALL:Q8R7R2 (EMBL:AE013176) (691 aa) fasta scores: E(): 9.2e-56, 36.48% id in 677 aa; ribonucleotide reductase 649327..651861 Burkholderia pseudomallei K96243 3095567 YP_110502.1 CDS BPSS0480 NC_006351.1 652422 652544 D hypothetical protein 652422..652544 Burkholderia pseudomallei K96243 3096521 YP_110503.1 CDS BPSS0481 NC_006351.1 652895 654520 D Similar to Azoarcus evansii 2-aminobenzoate-CoA ligase SWALL:Q93FC0 (EMBL:AF320253) (542 aa) fasta scores: E(): 2.6e-119, 57.35% id in 537 aa, and to Bacillus subtilis long-chain-fatty-acid--CoA ligase LcfA SWALL:LCFA_BACSU (SWALL:P94547) (560 aa) fasta scores: E(): 1.9e-31, 29.07% id in 564 aa; CoA ligase 652895..654520 Burkholderia pseudomallei K96243 3096431 YP_110504.1 CDS BPSS0482 NC_006351.1 654607 655497 D Similar in its N-terminal region to Pseudomonas aeruginosa hypothetical protein pa0997 SWALL:Q9I4X2 (EMBL:AE004532) (283 aa) fasta scores: E(): 2.6e-08, 33.15% id in 190 aa and very low similarity also in its N-terminal region to Bacillus subtilis 3-oxoacyl-[acyl-carrier-protein] synthase III FabH SWALL:FABH_BACSU (SWALL:O34746) (312 aa) fasta scores: E(): 0.25, 27.27% id in 154 aa; hypothetical protein 654607..655497 Burkholderia pseudomallei K96243 3096432 YP_110505.1 CDS BPSS0483 NC_006351.1 655497 656603 D Most of the significant database matches in this CDS are to eukaryotic entries. Similar to Perilla frutescens beta-ketoacyl-ACP synthase IIIA Kas IIIA SWALL:O48944 (EMBL:AF026150) (401 aa) fasta scores: E(): 1.2e-18, 28.29% id in 357 aa, and to Cuphea wrightii 3-oxoacyl-[acyl-carrier-protein] synthase III A, chloroplast precursor Kas3A SWALL:FBH1_CUPWR (SWALL:P49244) (400 aa) fasta scores: E(): 1.6e-17, 28.88% id in 367 aa; 3-ketoacyl-ACP synthase 655497..656603 Burkholderia pseudomallei K96243 3095761 YP_110506.1 CDS fabH NC_006351.1 656593 657591 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-ACP synthase 656593..657591 Burkholderia pseudomallei K96243 3095088 YP_110507.1 CDS BPSS0485 NC_006351.1 657606 658496 D Similar to Pseudomonas aeruginosa hypothetical protein pa1000 SWALL:YA00_PSEAE (SWALL:P20581) (301 aa) fasta scores: E(): 3.7e-25, 32.67% id in 303 aa, and to Aeropyrum pernix hypothetical protein ape2156 SWALL:Q9Y9Y3 (EMBL:AP000063) (298 aa) fasta scores: E(): 7.7e-07, 24.9% id in 249 aa; metallo-beta lactamase-related protein 657606..658496 Burkholderia pseudomallei K96243 3095907 YP_110508.1 CDS BPSS0486 NC_006351.1 658624 662499 D N-terminal region similar to Streptomyces atroolivaceus non-ribosomal peptide synthetase SWALL:AAN85512 (EMBL:AF484556) (1745 aa) fasta scores: E(): 2.8e-67, 36.51% id in 838 aa, and C-terminal region similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa1631 SWALL:Q9I391 (EMBL:AE004590) (384 aa) fasta scores: E(): 2e-23, 32.13% id in 361 aa; non-ribosomal peptide synthetase 658624..662499 Burkholderia pseudomallei K96243 3095908 YP_110509.1 CDS BPSS0487 NC_006351.1 662513 664648 D hypothetical protein 662513..664648 Burkholderia pseudomallei K96243 3096258 YP_110510.1 CDS BPSS0488 NC_006351.1 665015 665386 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0788 or rs05049 SWALL:Q8Y1A2 (EMBL:AL646061) (127 aa) fasta scores: E(): 2.7e-17, 47.1% id in 121 aa, and to Neisseria meningitidis membrane protein nma1176 SWALL:Q9JUR4 (EMBL:AL162755) (127 aa) fasta scores: E(): 8.6e-14, 42.06% id in 126 aa; hypothetical protein 665015..665386 Burkholderia pseudomallei K96243 3096647 YP_110511.1 CDS BPSS0489 NC_006351.1 666227 666682 D Similar to Rhizobium loti hypothetical protein mlr2292 SWALL:Q98IR1 (EMBL:AP002999) (183 aa) fasta scores: E(): 4.2e-09, 32.62% id in 141 aa, and to Xanthomonas axonopodis hypothetical protein xac0102 SWALL:AAM34994 (EMBL:AE011633) (219 aa) fasta scores: E(): 2e-08, 33.11% id in 151 aa; hypothetical protein 666227..666682 Burkholderia pseudomallei K96243 3095335 YP_110512.1 CDS ahpF NC_006351.1 667638 669245 R Similar to Pseudomonas putida alkyl hydroperoxide reductase subunit F AhpF SWALL:AHPF_PSEPU (SWALL:O82864) (520 aa) fasta scores: E(): 2.5e-134, 71.26% id in 522 aa, and to Escherichia coli alkyl hydroperoxide reductase subunit F Ahpf or b0606 SWALL:AHPF_ECOLI (SWALL:P35340) (521 aa) fasta scores: E(): 1.6e-117, 60.5% id in 519 aa; alkyl hydroperoxide reductase complement(667638..669245) Burkholderia pseudomallei K96243 3095973 YP_110513.1 CDS ahpC NC_006351.1 669449 670012 R Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri alkyl hydroperoxide reductase C22 protein AhpC or b0605 or c0694 or z0749 or ecs0644 or sf0524 SWALL:AHPC_ECOLI (SWALL:P26427) (186 aa) fasta scores: E(): 8.4e-52, 67.02% id in 185 aa, and to Pseudomonas putida AhpC SWALL:O82863 (EMBL:AB010689) (187 aa) fasta scores: E(): 6.4e-62, 81.28% id in 187 aa; alkyl hydroperoxide reductase complement(669449..670012) Burkholderia pseudomallei K96243 3096133 YP_110514.1 CDS BPSS0493 NC_006351.1 670272 671369 R Similar to the N-terminal region of Yersinia pestis carbohydrate-binding protein ypo3227 SWALL:Q8ZC03 (EMBL:AJ414156) (534 aa) fasta scores: E(): 9.8e-68, 52.97% id in 353 aa, and of Alteromonas sp. chitin-binding protein 1 precursor Cbp1 SWALL:Q8VLQ2 (EMBL:AB063629) (475 aa) fasta scores: E(): 1.2e-28, 38.04% id in 347 aa; chitin-binding protein complement(670272..671369) Burkholderia pseudomallei K96243 3096851 YP_110515.1 CDS BPSS0494 NC_006351.1 671929 672432 R hypothetical protein complement(671929..672432) Burkholderia pseudomallei K96243 3096852 YP_110516.1 CDS BPSS0495 NC_006351.1 672507 673130 R Similar to Pseudomonas aeruginosa hypothetical protein pa3208 SWALL:Q9HZ32 (EMBL:AE004744) (186 aa) fasta scores: E(): 9.9e-25, 43.71% id in 183 aa, and to Escherichia coli, and Escherichia coli O157:H7 protein YdjA or b1765 or z2798 or ecs2471 SWALL:YDJA_ECOLI (SWALL:P24250) (183 aa) fasta scores: E(): 7.8e-18, 39.08% id in 174 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; nitroreductase complement(672507..673130) Burkholderia pseudomallei K96243 3095734 YP_110517.1 CDS BPSS0496 NC_006351.1 673843 675279 D Similar to Rhizobium loti hypothetical protein mll0717 SWALL:Q98M60 (EMBL:AP002995) (478 aa) fasta scores: E(): 4.6e-148, 78.52% id in 475 aa, and to Synechocystis sp. hypothetical protein sll0335 SWALL:Y335_SYNY3 (SWALL:Q55587) (481 aa) fasta scores: E(): 1e-94, 52.13% id in 468 aa; hypothetical protein 673843..675279 Burkholderia pseudomallei K96243 3096563 YP_110518.1 CDS BPSS0497 NC_006351.1 675374 676315 D Similar to Rhizobium loti hypothetical protein mll0716 SWALL:Q98M61 (EMBL:AP002995) (313 aa) fasta scores: E(): 1.3e-84, 66.98% id in 312 aa, and to Agrobacterium tumefaciens hypothetical protein atu2339 or agr_c_4249 SWALL:Q8UCY9 (EMBL:AE009183) (313 aa) fasta scores: E(): 1.7e-74, 56.91% id in 311 aa; hypothetical protein 675374..676315 Burkholderia pseudomallei K96243 3096564 YP_110519.1 CDS BPSS0498 NC_006351.1 676324 677280 D Similar to Agrobacterium tumefaciens hypothetical protein atu2340 or agr_c_4251 SWALL:Q8UCY8 (EMBL:AE009183) (273 aa) fasta scores: E(): 1.6e-26, 39.81% id in 319 aa, and to Rhizobium meliloti hypothetical protein rb1182 or smb20888 SWALL:Q92UE9 (EMBL:AL603646) (272 aa) fasta scores: E(): 1.9e-25, 38.8% id in 317 aa; transglutaminase-like superfamily protein 676324..677280 Burkholderia pseudomallei K96243 3096842 YP_110520.1 CDS BPSS0499 NC_006351.1 677417 680839 D Similar to Rhizobium loti hypothetical protein mll2877 SWALL:Q98HG6 (EMBL:AP003000) (1119 aa) fasta scores: E(): 1.2e-129, 56.41% id in 1138 aa, and to Mycobacterium leprae hypothetical protein ml2678 or mlcb1913.12 SWALL:O53120 (EMBL:AL022118) (1000 aa) fasta scores: E(): 1.7e-23, 32.69% id in 1049 aa; transglutaminase-like superfamily protein 677417..680839 Burkholderia pseudomallei K96243 3096215 YP_110521.1 CDS BPSS0500 NC_006351.1 681027 683675 D Similar to Pseudomonas aeruginosa hypothetical protein pa4927 SWALL:Q9HUN7 (EMBL:AE004905) (830 aa) fasta scores: E(): 8.9e-69, 42.25% id in 833 aa, and to Mycobacterium leprae hypothetical protein ml2679 or mlcb1913.13 SWALL:O53121 (EMBL:AL022118) (893 aa) fasta scores: E(): 2.3e-47, 32.03% id in 899 aa; hypothetical protein 681027..683675 Burkholderia pseudomallei K96243 3096216 YP_110522.1 CDS BPSS0501 NC_006351.1 683666 684703 D CDS is extended at the N-terminus in comparison to some orthologues. Similar to Pseudomonas aeruginosa hypothetical protein pa4926 SWALL:Q9HUN8 (EMBL:AE004905) (311 aa) fasta scores: E(): 6.3e-32, 45.51% id in 323 aa, and to Mycobacterium tuberculosis hypothetical protein Rv2569c or MT2645 or MTCY227.32 SWALL:YP69_MYCTU (SWALL:Q50652) (314 aa) fasta scores: E(): 2.7e-28, 41.61% id in 310 aa; transglutaminase-like superfamily protein 683666..684703 Burkholderia pseudomallei K96243 3095926 YP_110523.1 CDS BPSS0502 NC_006351.1 684891 686393 R Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 8.3e-36, 31.95% id in 460 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa4165 SWALL:Q9HWL6 (EMBL:AE004833) (496 aa) fasta scores: E(): 4.8e-49, 38.21% id in 471 aa; GntR family transcriptional regulator complement(684891..686393) Burkholderia pseudomallei K96243 3095927 YP_110524.1 CDS BPSS0503 NC_006351.1 686521 687708 D Similar to Pseudomonas aeruginosa chloramphenicol resistance protein CmlA SWALL:CMLA_PSEAE (SWALL:P32482) (419 aa) fasta scores: E(): 9.1e-26, 29.92% id in 381 aa, and to Pseudomonas aeruginosa probable MFS transporter pa3573 SWALL:Q9HY47 (EMBL:AE004778) (392 aa) fasta scores: E(): 3.7e-34, 34.39% id in 378 aa; transporter protein 686521..687708 Burkholderia pseudomallei K96243 3096742 YP_110525.1 CDS BPSS0504 NC_006351.1 688046 689119 R Similar to Ralstonia solanacearum probable transmembrane protein rsp0134 or rs02986 SWALL:Q8XTH6 (EMBL:AL646076) (361 aa) fasta scores: E(): 9.4e-72, 58.68% id in 351 aa, and to Neisseria meningitidis integral membrane protein nma0079 SWALL:Q9JX36 (EMBL:AL162752) (375 aa) fasta scores: E(): 8.9e-27, 34.57% id in 350 aa; hypothetical protein complement(688046..689119) Burkholderia pseudomallei K96243 3095305 YP_110526.1 CDS BPSS0505 NC_006351.1 689358 690323 R Similar to Streptomyces coelicolor transcriptional regulator SCO6746 or SC5f2A.29 SWALL:Q9X7Q2 (EMBL:AL939129) (325 aa) fasta scores: E(): 5.5e-47, 45.62% id in 320 aa, and to Caulobacter crescentus AraC family transcriptional regulator cc2960 SWALL:Q9A483 (EMBL:AE005960) (312 aa) fasta scores: E(): 8.8e-44, 43.5% id in 308 aa. Similar to BPSS1864, 56.782% identity (56.782% ungapped) in 317 aa overlap; AraC family transcriptional regulator complement(689358..690323) Burkholderia pseudomallei K96243 3095306 YP_110527.1 CDS BPSS0506 NC_006351.1 690465 691163 D Similar to Anabaena sp. ThiJ family protein all7521 SWALL:Q8ZSI9 (EMBL:AP003602) (226 aa) fasta scores: E(): 2.7e-23, 39.6% id in 202 aa, and to Streptomyces coelicolor hypothetical protein sco6747 sco6747 or sc5f2a.30 SWALL:Q9X7Q3 (EMBL:AL939129) (211 aa) fasta scores: E(): 2.2e-14, 31.03% id in 203 aa; DJ-1/PfpI family protein 690465..691163 Burkholderia pseudomallei K96243 3096430 YP_110528.1 CDS BPSS0507 NC_006351.1 691309 692376 R Similar to Pseudomonas aeruginosa 2-aminoethylphosphonate:pyruvate aminotransferase PhnW or pa1310 SWALL:Q9I434 (EMBL:AE004560) (371 aa) fasta scores: E(): 5.8e-31, 35.42% id in 350 aa, and to Vibrio cholerae 2-aminoethylphosphonate:pyruvate aminotransferase vca0604 SWALL:Q9KLY7 (EMBL:AE004391) (367 aa) fasta scores: E(): 8.4e-37, 37% id in 354 aa; aminotransferase class-V complement(691309..692376) Burkholderia pseudomallei K96243 3095919 YP_110529.1 CDS BPSS0508 NC_006351.1 692391 693572 R Similar to Streptomyces viridochromogenes 3-phosphonopyruvate decarboxylase Ppd SWALL:O86938 (EMBL:Y14337) (397 aa) fasta scores: E(): 3.7e-49, 45.29% id in 393 aa, and to Streptomyces hygroscopicus 3-phosphonopyruvate decarboxylase BcpC SWALL:BAA07055 (EMBL:D37809) (401 aa) fasta scores: E(): 5.5e-46, 43.9% id in 394 aa; thiamine pyrophosphate enzyme complement(692391..693572) Burkholderia pseudomallei K96243 3095920 YP_110530.1 CDS BPSS0509 NC_006351.1 693569 695203 R Possible fusion protein. N-terminal region is similar to Mytilus edulis phosphoenolpyruvate phosphomutase SWALL:PEPM_MYTED (SWALL:P56839) (295 aa) fasta scores: E(): 1.1e-72, 68.18% id in 286 aa, and to Tetrahymena pyriformis phosphoenolpyruvate phosphomutase precursor pepM SWALL:PEPM_TETPY (SWALL:P33182) (300 aa) fasta scores: E(): 2.7e-68, 61.95% id in 297 aa. C-terminal region is weakly similar to Pseudomonas putida transferase, pp0726 SWALL:AAN66351 (EMBL:AE016776) (241 aa) fasta scores: E(): 4.1e-13, 28.76% id in 226 aa; hypothetical protein complement(693569..695203) Burkholderia pseudomallei K96243 3095956 YP_110531.1 CDS BPSS0510 NC_006351.1 695254 696036 R Similar to Caulobacter crescentus nucleotidyltransferase cc1152 SWALL:Q9A942 (EMBL:AE005793) (253 aa) fasta scores: E(): 3.8e-14, 32.93% id in 249 aa, and to Archaeoglobus fulgidus glucose-1-phosphate cytidylyltransferase af1142 SWALL:O29123 (EMBL:AE001025) (241 aa) fasta scores: E(): 3.2e-13, 28.62% id in 248 aa; hypothetical protein complement(695254..696036) Burkholderia pseudomallei K96243 3096248 YP_110532.1 CDS BPSS0511 NC_006351.1 696060 697061 R Similar to Pseudomonas aeruginosa hypothetical protein pa4313 SWALL:Q9HW88 (EMBL:AE004847) (333 aa) fasta scores: E(): 4.3e-05, 25.98% id in 304 aa, and to Mycobacterium leprae probable integral membrane protein ml2618 SWALL:Q9CD01 (EMBL:AL583926) (352 aa) fasta scores: E(): 0.12, 24.31% id in 329 aa; hypothetical protein complement(696060..697061) Burkholderia pseudomallei K96243 3096249 YP_110533.1 CDS BPSS0512 NC_006351.1 697058 697831 R Weakly similar to Streptomyces griseus ArpA protein SWALL:Q54223 (EMBL:X79605) (250 aa) fasta scores: E(): 8.3e-05, 26.02% id in 196 aa; hypothetical protein complement(697058..697831) Burkholderia pseudomallei K96243 3095733 YP_110534.1 CDS BPSS0513 NC_006351.1 697828 698517 R Weakly similar to Aeropyrum pernix hypothetical protein ape1516 SWALL:Q9YBT3 (EMBL:AP000061) (223 aa) fasta scores: E(): 2.3e-05, 27.91% id in 197 aa, and to Streptomyces coelicolor transmembrane protein SCO3457 or SCE46.14 SWALL:Q9RKH5 (EMBL:AL939116) (205 aa) fasta scores: E(): 0.00014, 32.63% id in 190 aa; CDP-alcohol phosphatidyltransferase complement(697828..698517) Burkholderia pseudomallei K96243 3096807 YP_110535.1 CDS BPSS0514 NC_006351.1 698792 700396 D Similar to Clostridium kluyveri succinyl-CoA:coenzyme A transferase Cat1 SWALL:CAT1_CLOKL (SWALL:P38946) (538 aa) fasta scores: E(): 2e-97, 51.73% id in 520 aa, and to Xanthomonas campestris coa tranferase xcc3588 SWALL:Q8P4W8 (EMBL:AE012479) (504 aa) fasta scores: E(): 1.2e-133, 68.52% id in 502 aa. Possible alternative translational start sites; acetyl-CoA hydrolase/transferase 698792..700396 Burkholderia pseudomallei K96243 3096808 YP_110536.1 CDS BPSS0515 NC_006351.1 702116 703054 D Weakly similar to Yersinia pestis hypothetical protein ypo0499 or y3676 SWALL:Q8ZIJ9 (EMBL:AJ414143) (337 aa) fasta scores: E(): 2.6e-05, 28.43% id in 313 aa, and to Xanthomonas axonopodis hypothetical protein xac4112 SWALL:Q8PF73 (EMBL:AE012060) (347 aa) fasta scores: E(): 0.084, 26.3% id in 346 aa; hypothetical protein 702116..703054 Burkholderia pseudomallei K96243 3095506 YP_110537.1 CDS BPSS0516 NC_006351.1 703088 703636 D Similar to Yersinia pestis hypothetical protein ypo0500 SWALL:Q8ZIJ8 (EMBL:AJ414143) (186 aa) fasta scores: E(): 5.8e-30, 55.76% id in 156 aa, and to Salmonella typhi hypothetical protein sty0297 SWALL:Q8Z970 (EMBL:AL627266) (180 aa) fasta scores: E(): 4.7e-28, 47.51% id in 181 aa; hypothetical protein 703088..703636 Burkholderia pseudomallei K96243 3096828 YP_110538.1 CDS BPSS0517 NC_006351.1 703633 705144 D Similar to Yersinia pestis hypothetical protein ypo0501 SWALL:Q8ZIJ7 (EMBL:AJ414143) (503 aa) fasta scores: E(): 5.4e-142, 65.66% id in 498 aa, and to Pseudomonas aeruginosa hypothetical protein pa0084 SWALL:Q9I748 (EMBL:AE004447) (498 aa) fasta scores: E(): 8e-133, 61.94% id in 494 aa; hypothetical protein 703633..705144 Burkholderia pseudomallei K96243 3096829 YP_110539.1 CDS BPSS0518 NC_006351.1 705288 705815 D Similar to Yersinia pestis hypothetical protein ypo0502 SWALL:Q8ZIJ6 (EMBL:AJ414143) (172 aa) fasta scores: E(): 1e-49, 72.09% id in 172 aa, and to Pseudomonas aeruginosa hypothetical protein pa0085 SWALL:Q9I747 (EMBL:AE004447) (162 aa) fasta scores: E(): 4.1e-13, 37.27% id in 169 aa; hypothetical protein 705288..705815 Burkholderia pseudomallei K96243 3096785 YP_110540.1 CDS BPSS0519 NC_006351.1 705856 706326 D Similar to Yersinia pestis hypothetical protein ypo0503 SWALL:Q8ZIJ5 (EMBL:AJ414143) (147 aa) fasta scores: E(): 9.3e-06, 30.37% id in 135 aa. Weakly similar to Salmonella typhi hypothetical protein sty0290 SWALL:Q8Z977 (EMBL:AL627266) (164 aa) fasta scores: E(): 0.1, 31.57% id in 114 aa; hypothetical protein 705856..706326 Burkholderia pseudomallei K96243 3096580 YP_110541.1 CDS BPSS0520 NC_006351.1 706340 708202 D Similar to Yersinia pestis hypothetical protein ypo0504 SWALL:Q8ZIJ4 (EMBL:AJ414143) (614 aa) fasta scores: E(): 5.2e-60, 33.98% id in 612 aa, and to Pseudomonas aeruginosa hypothetical protein pa0088 SWALL:Q9I744 (EMBL:AE004447) (619 aa) fasta scores: E(): 1.3e-39, 31.38% id in 615 aa; hypothetical protein 706340..708202 Burkholderia pseudomallei K96243 3096581 YP_110542.1 CDS BPSS0521 NC_006351.1 708199 709188 D Similar to Yersinia pestis hypothetical protein ypo0505 SWALL:Q8ZIJ3 (EMBL:AJ414143) (327 aa) fasta scores: E(): 4.8e-37, 36.41% id in 335 aa. Weakly similar to Pseudomonas aeruginosa hypothetical protein pa0089 SWALL:Q9I743 (EMBL:AE004447) (348 aa) fasta scores: E(): 5.4e-15, 28.34% id in 321 aa; hypothetical protein 708199..709188 Burkholderia pseudomallei K96243 3095800 YP_110543.1 CDS BPSS0522 NC_006351.1 709191 712061 D N-terminal region is similar to Escherichia coli heat shock protein ClpB or HtpM SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 7.4e-43, 36.28% id in 871 aa, and to Yersinia pestis Clp ATPase ypo0506 SWALL:Q8ZIJ2 (EMBL:AJ414143) (867 aa) fasta scores: E(): 1.6e-136, 48.66% id in 861 aa; ATPase 709191..712061 Burkholderia pseudomallei K96243 3096832 YP_110544.1 CDS BPSS0523 NC_006351.1 712052 714343 D Similar to Yersinia pestis hypothetical protein ypo0507 SWALL:Q8ZIJ1 (EMBL:AJ414143) (782 aa) fasta scores: E(): 1.4e-145, 58.14% id in 786 aa, and to Pseudomonas aeruginosa hypothetical protein pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 4.8e-63, 33.56% id in 733 aa. CDS is extended at the C-terminus in comparison to orthologues. Highly simlar to BPSS0524, 91.874% identity (91.995% ungapped) in 763 aa overlap; hypothetical protein 712052..714343 Burkholderia pseudomallei K96243 3096833 YP_110545.1 CDS BPSS0524 NC_006351.1 714509 716797 D Similar to Yersinia pestis hypothetical protein ypo0507 SWALL:Q8ZIJ1 (EMBL:AJ414143) (782 aa) fasta scores: E(): 1.1e-143, 57.7% id in 785 aa, and to Pseudomonas aeruginosa hypothetical protein pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 1.3e-60, 33.6% id in 735 aa. Highly similar to BPSS0523, 91.874% identity (91.995% ungapped) in 763 aa overlap; hypothetical protein 714509..716797 Burkholderia pseudomallei K96243 3095481 YP_110546.1 CDS BPSS0525 NC_006351.1 716801 719017 D No significant database matches to the full length CDS. N-terminal region is similar to Yersinia pestis hypothetical protein ypo0508 SWALL:Q8ZIJ0 (EMBL:AJ414143) (190 aa) fasta scores: E(): 4.9e-08, 30.6% id in 183 aa. Internal region is similar to Yersinia pestis hypothetical protein ypo0509 SWALL:Q8ZII9 (EMBL:AJ414143) (540 aa) fasta scores: E(): 4.2e-21, 24.13% id in 547 aa. C-terminal region is similar to to Yersinia pestis hypothetical protein ypo0510 SWALL:Q8ZII8 (EMBL:AJ414143) (367 aa) fasta scores: E(): 0.00034, 18.62% id in 247 aa; hypothetical protein 716801..719017 Burkholderia pseudomallei K96243 3096425 YP_110547.1 CDS BPSS0526 NC_006351.1 719014 720087 D Weakly similar to Chlorobium tepidum pentapeptide repeat family protein CT0918 SWALL:AAM72153 (EMBL:AE012857) (382 aa) fasta scores: E(): 0.06, 19.69% id in 325 aa; hypothetical protein 719014..720087 Burkholderia pseudomallei K96243 3096426 YP_110548.1 CDS BPSS0527 NC_006351.1 720090 720806 D Possible alternative translational start site. C-terminal region is weakly similar to Yersinia pestis hypothetical protein ypo0511 SWALL:Q8ZII7 (EMBL:AJ414143) (205 aa) fasta scores: E(): 0.0008, 25.74% id in 202 aa; hypothetical protein 720090..720806 Burkholderia pseudomallei K96243 3095877 YP_110549.1 CDS BPSS0528 NC_006351.1 720849 721238 D Similar to Yersinia pestis hypothetical protein ypo0511a SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 1.1e-09, 44.14% id in 111 aa. Similar to BPSS0185, 55.556% identity (56.075% ungapped) in 108 aa overlap; hypothetical protein 720849..721238 Burkholderia pseudomallei K96243 3095391 YP_110550.1 CDS BPSS0529 NC_006351.1 721244 721837 D Weakly similar to Yersinia pestis lipoprotein ypo0512 SWALL:Q8ZII5 (EMBL:AJ414143) (163 aa) fasta scores: E(): 1.1e-05, 23.7% id in 135 aa; lipoprotein 721244..721837 Burkholderia pseudomallei K96243 3095392 YP_110551.1 CDS BPSS0530 NC_006351.1 721834 723195 D Similar to Yersinia pestis hypothetical protein ypo0513 SWALL:Q8ZII4 (EMBL:AJ414143) (451 aa) fasta scores: E(): 5.3e-66, 41.2% id in 449 aa, and to Pseudomonas aeruginosa hypothetical protein pa0079 SWALL:Q9I753 (EMBL:AE004447) (444 aa) fasta scores: E(): 1.5e-46, 35.21% id in 443 aa; hypothetical protein 721834..723195 Burkholderia pseudomallei K96243 3095955 YP_110552.1 CDS BPSS0531 NC_006351.1 723278 724936 D Similar to Yersinia pestis OmpA-family membrane protein ypo0514 SWALL:Q8ZII3 (EMBL:AJ414143) (536 aa) fasta scores: E(): 5.4e-45, 36.23% id in 505 aa. Internal region is weakly similar to Salmonella typhi membrane protein sty0305 SWALL:Q8Z965 (EMBL:AL627266) (433 aa) fasta scores: E(): 3.5e-13, 28.31% id in 445 aa. CDS is extended at the C-terminus in comparison to similar proteins; hypothetical protein 723278..724936 Burkholderia pseudomallei K96243 3095834 YP_110553.1 CDS BPSS0532 NC_006351.1 724933 728436 D Similar to Yersinia pestis membrane protein ypo0515 SWALL:Q8ZII2 (EMBL:AJ414143) (1150 aa) fasta scores: E(): 2.6e-128, 34.31% id in 1157 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa0077 SWALL:Q9I755 (EMBL:AE004446) (1101 aa) fasta scores: E(): 6e-62, 26.85% id in 1132 aa; hypothetical protein 724933..728436 Burkholderia pseudomallei K96243 3095835 YP_110554.1 CDS BPSS0533 NC_006351.1 728495 728854 D Similar to Yersinia pestis hypothetical protein ypo0516 SWALL:Q8ZII1 (EMBL:AJ414143) (117 aa) fasta scores: E(): 1.1e-07, 31.53% id in 111 aa; hypothetical protein 728495..728854 Burkholderia pseudomallei K96243 3096749 YP_110555.1 CDS BPSS0534 NC_006351.1 728877 729302 D Doubtful CDS. No significant database matches; hypothetical protein 728877..729302 Burkholderia pseudomallei K96243 3095635 YP_110556.1 CDS BPSS0535 NC_006351.1 729527 729898 D hypothetical protein 729527..729898 Burkholderia pseudomallei K96243 3095636 YP_110557.1 CDS BPSS0536 NC_006351.1 730449 731348 D Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 subunit A RhlA SWALL:RHLA_PSEAE (SWALL:Q51559) (295 aa) fasta scores: E(): 4e-45, 48.49% id in 266 aa, and to Pseudomonas putida (R)-3-hydroxydecanoyl-ACP:CoA transacylase PhaG SWALL:PHAG_PSEPU (SWALL:O85207) (295 aa) fasta scores: E(): 8.2e-42, 42.64% id in 272 aa. Almost identical to BPSS1352, 99.666% identity (99.666% ungapped) in 299 aa overlap; 3-hydroxydecanoyl-ACP:CoA transacylase 730449..731348 Burkholderia pseudomallei K96243 3096849 YP_110558.1 CDS BPSS0537 NC_006351.1 731570 732889 D Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 catalytic subunit B RhlB SWALL:Q51560 (EMBL:L28170) (426 aa) fasta scores: E(): 1.2e-47, 47.54% id in 427 aa, and to Nocardia aerocolonigenes glycosyltransferase RbmA or Ngt SWALL:CAC93713 (EMBL:AF534707) (421 aa) fasta scores: E(): 3.7e-08, 27.35% id in 446 aa. Almost identical to BPSS1351, 99.569% identity (99.569% ungapped) in 464 aa overlap; UDP-glucoronosyl and UDP-glucosyl transferase 731570..732889 Burkholderia pseudomallei K96243 3096379 YP_110559.1 CDS BPSS0538 NC_006351.1 732886 734472 D Similar to Escherichia coli multidrug resistance protein B EmrB SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 6.9e-88, 45.34% id in 505 aa, and to Burkholderia pseudomallei hypothetical protein SWALL:Q9ZF72 (EMBL:AF110185) (520 aa) fasta scores: E(): 2.7e-114, 56.92% id in 527 aa. CDS is extended at the N-terminus in comparison to some orthologues. Almost identical to BPSS1350, 99.621% identity (99.621% ungapped) in 528 aa overlap; transport protein 732886..734472 Burkholderia pseudomallei K96243 3096380 YP_110560.1 CDS BPSS0539 NC_006351.1 734725 735720 D Similar to Shigella flexneri DTDP-rhamnosyl transferase RfbF or sf2099 SWALL:RFBF_SHIFL (SWALL:P37782) (296 aa) fasta scores: E(): 2.7e-15, 25% id in 304 aa, and to Pseudomonas aeruginosa hypothetical protein pa1130 SWALL:Q9I4K5 (EMBL:AE004543) (325 aa) fasta scores: E(): 3.7e-41, 45.51% id in 312 aa. Almost identical to BPSS1349, 99.085% identity (99.085% ungapped) in 328 aa overlap; hypothetical protein 734725..735720 Burkholderia pseudomallei K96243 3095614 YP_110561.1 CDS BPSS0540 NC_006351.1 736025 737608 D Similar to Xanthomonas axonopodis outer membrane efflux protein xac1444 SWALL:AAM36315 (EMBL:AE011776) (496 aa) fasta scores: E(): 7.2e-38, 38.41% id in 505 aa, and to Burkholderia cepacia fusaric acid resistance protein fusa precursor FusA SWALL:FUSA_BURCE (SWALL:P24126) (530 aa) fasta scores: E(): 9.3e-28, 31.74% id in 526 aa. Identical to BPSS1348, 100.000% identity (100.000% ungapped) in 527 aa overlap; outer membrane efflux protein 736025..737608 Burkholderia pseudomallei K96243 3096736 YP_110562.1 CDS BPSS0541 NC_006351.1 738188 739354 D Similar to Escherichia coli multidrug resistance protein A EmrA SWALL:EMRA_ECOLI (SWALL:P27303) (390 aa) fasta scores: E(): 9e-46, 40.51% id in 390 aa, and to Xanthomonas campestris multidrug resistance efflux pump xcc1399 SWALL:AAM40697 (EMBL:AE012239) (397 aa) fasta scores: E(): 5.4e-50, 44.44% id in 387 aa. Almost identical to BPSS1347, 99.742% identity (99.742% ungapped) in 388 aa overlap; HlyD family secretion protein 738188..739354 Burkholderia pseudomallei K96243 3096737 YP_110563.1 CDS BPSS0542 NC_006351.1 739867 741531 R Similar to Hansenula anomala invertase precursor INV1 SWALL:INV1_HANAN (SWALL:P40912) (550 aa) fasta scores: E(): 4.3e-41, 31.59% id in 519 aa, and to Acetobacter diazotrophicus levanase precursor LsdB SWALL:Q9RBJ1 (EMBL:L41732) (534 aa) fasta scores: E(): 1.4e-105, 53.09% id in 501 aa; glycosyl hydrolase complement(739867..741531) Burkholderia pseudomallei K96243 3095630 YP_110564.1 CDS BPSS0543 NC_006351.1 741664 743229 R Similar to Acetobacter diazotrophicus levansucrase precursor LsdA SWALL:SACB_ACEDI (SWALL:Q43998) (584 aa) fasta scores: E(): 4.8e-129, 66.8% id in 476 aa, and to Arthrobacter sp. K-1 beta-fructofuranosidase Bff SWALL:Q8VW87 (EMBL:AB062134) (578 aa) fasta scores: E(): 7.6e-109, 56.27% id in 526 aa; levansucrase complement(741664..743229) Burkholderia pseudomallei K96243 3095602 YP_110565.1 CDS BPSS0544 NC_006351.1 743418 744434 D Similar to Escherichia coli raffinose operon repressor RafR SWALL:RAFR_ECOLI (SWALL:P21867) (335 aa) fasta scores: E(): 3.5e-39, 38.85% id in 332 aa, and to Rhizobium meliloti transcription regulator AglR or r00694 or smc03060 SWALL:AGLR_RHIME (SWALL:Q9Z3R4) (356 aa) fasta scores: E(): 4.5e-37, 40.18% id in 321 aa; LacI family regulatory protein 743418..744434 Burkholderia pseudomallei K96243 3095603 YP_110566.1 CDS fdhA NC_006351.1 744930 746129 D Similar to Pseudomonas putida glutathione-independent formaldehyde dehydrogenase FdhA SWALL:FADH_PSEPU (SWALL:P46154) (398 aa) fasta scores: E(): 1.2e-121, 80.9% id in 398 aa, and to Ralstonia solanacearum probable glutathione-independent formaldehyde dehydrogenase oxidoreductase rsp0053 or rs02028 SWALL:Q8XTQ3 (EMBL:AL646076) (398 aa) fasta scores: E(): 2e-142, 92.98% id in 399 aa; glutathione-independent formaldehyde dehydrogenase 744930..746129 Burkholderia pseudomallei K96243 3095054 YP_110567.1 CDS BPSS0546 NC_006351.1 746307 747332 R Similar to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 5.7e-114, 85.71% id in 336 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 1.5e-65, 55.12% id in 312 aa. Similar to BPSS1424, 56.913% identity (57.097% ungapped) in 311 aa overlap; AraC family transcriptional regulator complement(746307..747332) Burkholderia pseudomallei K96243 3094917 YP_110568.1 CDS glyA NC_006351.1 747751 749040 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 747751..749040 Burkholderia pseudomallei K96243 3096429 YP_110569.1 CDS BPSS0548 NC_006351.1 749113 750084 D Similar to Ralstonia solanacearum dipeptidase rsp0056 or rs02031 SWALL:Q8XTQ0 (EMBL:AL646076) (323 aa) fasta scores: E(): 1.7e-119, 90.4% id in 323 aa, and to Pseudomonas aeruginosa hypothetical protein pa5396 SWALL:Q9HTG8 (EMBL:AE004952) (325 aa) fasta scores: E(): 1.1e-94, 71.47% id in 319 aa; family M19 non-peptidase 749113..750084 Burkholderia pseudomallei K96243 3095707 YP_110570.1 CDS BPSS0549 NC_006351.1 750235 750768 D Similar to Ralstonia solanacearum hypothetical protein rsp0057 or rs02032 SWALL:Q8XTP9 (EMBL:AL646076) (177 aa) fasta scores: E(): 8.8e-72, 90.85% id in 175 aa, and to Pseudomonas aeruginosa hypothetical protein pa5397 SWALL:Q9HTG7 (EMBL:AE004952) (176 aa) fasta scores: E(): 1e-39, 57.71% id in 175 aa; hypothetical protein 750235..750768 Burkholderia pseudomallei K96243 3095708 YP_110571.1 CDS BPSS0550 NC_006351.1 750829 752892 D Similar to Rhizobium meliloti probable N-methylproline demethylase StcD or StcD2 or rb1010 or smb21570 SWALL:STCD_RHIME (SWALL:O87278) (678 aa) fasta scores: E(): 2.6e-101, 43.61% id in 681 aa, and to Ralstonia solanacearum probable stachydrine utilization oxidoreductase rsp0058 or rs02033 SWALL:Q8XTP8 (EMBL:AL646076) (687 aa) fasta scores: E(): 0, 94.46% id in 687 aa; NADH:flavin oxidoreductase / NADH oxidase 750829..752892 Burkholderia pseudomallei K96243 3095620 YP_110572.1 CDS BPSS0551 NC_006351.1 752895 754820 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0059 or rs02034 SWALL:Q8XTP7 (EMBL:AL646076) (641 aa) fasta scores: E(): 1.6e-211, 86.73% id in 641 aa. C-terminal region os weakly similar to Escherichia coli anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC SWALL:GLPC_ECOLI (SWALL:P13034) (396 aa) fasta scores: E(): 0.0036, 22.41% id in 415 aa; hypothetical protein 752895..754820 Burkholderia pseudomallei K96243 3095675 YP_110573.1 CDS BPSS0552 NC_006351.1 754825 755997 D CDS is extended at the N-terminus in comparison to most orthologues. C-terminal region is similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SWALL:ETFA_BRAJA (SWALL:P53573) (314 aa) fasta scores: E(): 3.2e-14, 30.35% id in 313 aa. Full length CDS is similar to Ralstonia solanacearum electron transfer flavoprotein alpha-subunit rsp0060 or rs02035 SWALL:Q8XTP6 (EMBL:AL646076) (392 aa) fasta scores: E(): 2.1e-98, 71.89% id in 395 aa. Possible alternative translational start site; electron transfer flavoprotein subunit alpha 754825..755997 Burkholderia pseudomallei K96243 3095676 YP_110574.1 CDS BPSS0553 NC_006351.1 755994 756779 D C-terminus is similar to the C-terminal region of Methylophilus methylotrophus electron transfer flavoprotein beta-subunit EtfB SWALL:ETFB_METME (SWALL:P53570) (264 aa) fasta scores: E(): 0.11, 27.92% id in 222 aa. Full length CDS is similar to Ralstonia solanacearum electron transfer flavoprotein beta-subunit rsp0061 or rs02036 SWALL:Q8XTP5 (EMBL:AL646076) (261 aa) fasta scores: E(): 6.7e-70, 77.39% id in 261 aa; electron transfer flavoprotein subunit beta 755994..756779 Burkholderia pseudomallei K96243 3096931 YP_110575.1 CDS BPSS0554 NC_006351.1 756804 758072 D Similar to Ralstonia solanacearum dioxygenase rsp0062 or rs02037 SWALL:Q8XTP4 (EMBL:AL646076) (414 aa) fasta scores: E(): 9.8e-153, 84.42% id in 411 aa, and to Pseudomonas aeruginosa probable ring hydroxylating dioxygenase, alpha-subunit pa5410 SWALL:Q9HTF4 (EMBL:AE004953) (429 aa) fasta scores: E(): 4e-73, 43.81% id in 420 aa. Possible alternative translational start site; (Fe-S)-binding protein 756804..758072 Burkholderia pseudomallei K96243 3097047 YP_110576.1 CDS BPSS0555 NC_006351.1 758093 759238 D Similar to Ralstonia solanacearum probable ferredoxin oxidoreductase rsp0063 or rs02038 SWALL:Q8XTP3 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.7e-133, 84.81% id in 382 aa, and to the C-terminal region of Escherichia coli probable phenylacetic acid degradation NADH oxidoreductase PaaE paae or b1392 SWALL:PAAE_ECOLI (SWALL:P76081) (356 aa) fasta scores: E(): 1.3e-21, 31.56% id in 358 aa; ferredoxin oxidoreductase 758093..759238 Burkholderia pseudomallei K96243 3097048 YP_110577.1 CDS BPSS0556 NC_006351.1 759348 760211 D Similar to Ralstonia solanacearum glycine betaine transmembrane and periplasmic ABC transporter protein rsp0064 or rs02039 SWALL:Q8XTP2 (EMBL:AL646076) (289 aa) fasta scores: E(): 1.3e-89, 80.56% id in 283 aa. C-terminal region is similar to the N-terminal region of Bacillus subtilis glycine betaine-binding protein precursor opuaC SWALL:OPAC_BACSU (SWALL:P46922) (293 aa) fasta scores: E(): 2.9e-21, 38.63% id in 176 aa; hypothetical protein 759348..760211 Burkholderia pseudomallei K96243 3095782 YP_110578.1 CDS BPSS0557 NC_006351.1 760392 762047 D Similar to Rhizobium meliloti permease r00105 or smc04147 SWALL:Q92T75 (EMBL:AL591782) (594 aa) fasta scores: E(): 8e-72, 46.73% id in 597 aa, and weakly similar to Mus musculus cystine/glutamate transporter SLC7A11 SWALL:XCT_MOUSE (SWALL:Q9WTR6) (502 aa) fasta scores: E(): 5.7e-05, 24.4% id in 549 aa; hypothetical protein 760392..762047 Burkholderia pseudomallei K96243 3095539 YP_110579.1 CDS BPSS0558 NC_006351.1 762134 763009 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(762134..763009) Burkholderia pseudomallei K96243 3095540 YP_110580.1 CDS BPSS0559 NC_006351.1 763153 764052 R Similar to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.9e-32, 37.5% id in 296 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0032 SWALL:Q9I798 (EMBL:AE004442) (304 aa) fasta scores: E(): 9.4e-40, 43.53% id in 294 aa; LysR family transcriptional regulator complement(763153..764052) Burkholderia pseudomallei K96243 3096278 YP_110581.1 CDS BPSS0560 NC_006351.1 764188 765741 D Similar to Rhizobium meliloti choline-sulfatase BetC SWALL:BETC_RHIME (SWALL:O69787) (512 aa) fasta scores: E(): 8.2e-93, 46.96% id in 511 aa, and to Pseudomonas aeruginosa choline sulfatase pa0031 SWALL:Q9I799 (EMBL:AE004442) (503 aa) fasta scores: E(): 2.2e-126, 61.06% id in 506 aa; choline-sulfatase 764188..765741 Burkholderia pseudomallei K96243 3096948 YP_110582.1 CDS BPSS0561 NC_006351.1 765777 766775 D Similar to Brucella melitensis glycine betaine/L-proline-binding protein bmei0441 SWALL:Q8YIK3 (EMBL:AE009487) (326 aa) fasta scores: E(): 5.5e-48, 43.36% id in 309 aa. C-terminal region is similar to the N-terminal region of Bacillus subtilis glycine betaine-binding protein precursor opuaC SWALL:OPAC_BACSU (SWALL:P46922) (293 aa) fasta scores: E(): 6.3e-07, 24.58% id in 179 aa; hypothetical protein 765777..766775 Burkholderia pseudomallei K96243 3096949 YP_110583.1 CDS BPSS0562 NC_006351.1 767003 768145 D Similar to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1e-29, 38.07% id in 394 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 1.1e-32, 39.34% id in 399 aa; porin protein 767003..768145 Burkholderia pseudomallei K96243 3096945 YP_110584.1 CDS BPSS0563 NC_006351.1 768200 769426 R Similar to the N-terminal region of Vibrio proteolyticus bacterial leucyl aminopeptidase precursor SWALL:AMPX_VIBPR (SWALL:Q01693) (504 aa) fasta scores: E(): 1.8e-62, 45.27% id in 402 aa, and to the full length Aeromonas punctata aminopeptidase ApaC SWALL:O82996 (EMBL:AB015725) (393 aa) fasta scores: E(): 2.6e-61, 46.63% id in 401 aa; aminopeptidase complement(768200..769426) Burkholderia pseudomallei K96243 3096279 YP_110585.1 CDS BPSS0564 NC_006351.1 769544 771247 R Similar to Bacillus stearothermophilus thermolysin precursor NprT SWALL:THER_BACST (SWALL:P06874) (548 aa) fasta scores: E(): 0.00076, 23.78% id in 597 aa, and to Alicyclobacillus acidocaldarius thermolysin precursor SWALL:Q43880 (EMBL:U07824) (546 aa) fasta scores: E(): 2.5e-05, 24.32% id in 592 aa; thermolysin metallopeptidase complement(769544..771247) Burkholderia pseudomallei K96243 3096280 YP_110586.1 CDS BPSS0565 NC_006351.1 771719 772663 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5389 SWALL:Q9HTH5 (EMBL:AE004951) (336 aa) fasta scores: E(): 5.2e-77, 62.58% id in 310 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5380 SWALL:Q9HTI4 (EMBL:AE004950) (367 aa) fasta scores: E(): 1.5e-48, 43.73% id in 311 aa; AraC family transcriptional regulator complement(771719..772663) Burkholderia pseudomallei K96243 3095853 YP_110587.1 CDS BPSS0566 NC_006351.1 772931 773881 D Similar to Pseudomonas aeruginosa hypothetical protein pa5388 SWALL:Q9HTH6 (EMBL:AE004951) (312 aa) fasta scores: E(): 1.2e-60, 50% id in 302 aa. C-terminal region is similar to the N-terminal region of Bacillus subtilis glycine betaine-binding protein precursor OpaC SWALL:OPAC_BACSU (SWALL:P46922) (293 aa) fasta scores: E(): 7.4e-10, 28.24% id in 177 aa. Similar to BPSS1423, 64.664% identity (64.664% ungapped) in 283 aa overlap; lipoprotein 772931..773881 Burkholderia pseudomallei K96243 3095242 YP_110588.1 CDS BPSS0567 NC_006351.1 773964 774893 D Similar to Pseudomonas aeruginosa hypothetical protein pa5387 SWALL:Q9HTH7 (EMBL:AE004951) (294 aa) fasta scores: E(): 8.5e-96, 83.05% id in 295 aa, and to Streptomyces coelicolor hypothetical protein sco6298 or scbac8d1.11c SWALL:Q93RX4 (EMBL:AL939127) (308 aa) fasta scores: E(): 1.3e-77, 66.88% id in 305 aa; hypothetical protein 773964..774893 Burkholderia pseudomallei K96243 3095243 YP_110589.1 CDS BPSS0568 NC_006351.1 775008 775973 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 775008..775973 Burkholderia pseudomallei K96243 3095253 YP_110590.1 CDS BPSS0569 NC_006351.1 775991 776473 D Similar to Pseudomonas aeruginosa hypothetical protein pa5385 SWALL:Q9HTH9 (EMBL:AE004951) (159 aa) fasta scores: E(): 1.6e-29, 54.19% id in 155 aa, and to Rhizobium loti hypothetical protein mlr1489 SWALL:Q98KG3 (EMBL:AP002997) (159 aa) fasta scores: E(): 9.8e-17, 39.31% id in 145 aa; hypothetical protein 775991..776473 Burkholderia pseudomallei K96243 3096956 YP_110591.1 CDS BPSS0570 NC_006351.1 776509 777468 D Similar to Escherichia coli acetyl esterase Aes SWALL:AES_ECOLI (SWALL:P23872) (319 aa) fasta scores: E(): 3.8e-11, 29.96% id in 297 aa, and to Rhizobium loti lipase mll4497 SWALL:Q98DY0 (EMBL:AP003004) (319 aa) fasta scores: E(): 2.1e-23, 43.46% id in 306 aa; hypothetical protein 776509..777468 Burkholderia pseudomallei K96243 3096957 YP_110592.1 CDS BPSS0571 NC_006351.1 777815 778123 R No significant database matches. Similar to BPSS1748, 52.525% identity (57.143% ungapped) in 99 aa overlap, and to BPSS0881, 50.000% identity (55.446% ungapped) in 112 aa overlap; hypothetical protein complement(777815..778123) Burkholderia pseudomallei K96243 3095861 YP_110593.1 CDS BPSS0572 NC_006351.1 778357 779346 R Similar to Homo sapiens androgen-regulated short-chain dehydrogenase/reductase 1 ARSDR1 SWALL:Q9NRW0 (EMBL:AF167438) (318 aa) fasta scores: E(): 1.8e-28, 38.56% id in 293 aa, and to Pseudomonas aeruginosa probable short chain dehydrogenase pa5031 SWALL:Q9HUD8 (EMBL:AE004916) (309 aa) fasta scores: E(): 1.7e-70, 61.11% id in 306 aa; short-chain dehydrogenase complement(778357..779346) Burkholderia pseudomallei K96243 3096678 YP_110594.1 CDS BPSS0573 NC_006351.1 779565 779855 R Doubtful CDS. No significant database matches; hypothetical protein complement(779565..779855) Burkholderia pseudomallei K96243 3096679 YP_110595.1 CDS BPSS0574 NC_006351.1 780625 781869 R Similar to Escherichia coli D-amino acid dehydrogenase small subunit DadA or DadR SWALL:DADA_ECOLI (SWALL:P29011) (432 aa) fasta scores: E(): 3.7e-17, 28.78% id in 410 aa, and to Rhizobium meliloti oxidoreductase r00742 or smc00797 SWALL:Q92RU9 (EMBL:AL591784) (417 aa) fasta scores: E(): 3.2e-77, 52.64% id in 416 aa; FAD dependent oxidoreductase complement(780625..781869) Burkholderia pseudomallei K96243 3096875 YP_110596.1 CDS braC NC_006351.1 782752 783867 D Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 5.9e-79, 59.23% id in 368 aa, and to Escherichia coli Leu/Ile/Val-binding protein precursor LivJ b3460 SWALL:LIVJ_ECOLI (SWALL:P02917) (367 aa) fasta scores: E(): 2.3e-65, 50.41% id in 361 aa; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor 782752..783867 Burkholderia pseudomallei K96243 3096414 YP_110597.1 CDS braD NC_006351.1 784061 784987 D Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease BraD SWALL:BRAD_PSEAE (SWALL:P21627) (307 aa) fasta scores: E(): 1.9e-64, 59.6% id in 302 aa, and to Escherichia coli high-affinity branched-chain amino acid transport system permease LivH SWALL:LIVH_ECOLI (SWALL:P08340) (308 aa) fasta scores: E(): 5.3e-62, 56.91% id in 311 aa; high-affinity branched-chain amino acid transport system permease 784061..784987 Burkholderia pseudomallei K96243 3096394 YP_110598.2 CDS livM NC_006351.1 784996 786267 D Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 784996..786267 Burkholderia pseudomallei K96243 3096605 YP_110599.1 CDS livG NC_006351.1 786264 787037 D Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 786264..787037 Burkholderia pseudomallei K96243 3096606 YP_110600.1 CDS braG NC_006351.1 787037 787738 D Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 1e-52, 65.23% id in 233 aa, and to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF SWALL:LIVF_ECOLI (SWALL:P22731) (237 aa) fasta scores: E(): 5.1e-52, 65.66% id in 233 aa. Similar to BPSL0923, 50.215% identity (50.431% ungapped) in 233 aa overlap; high-affinity branched-chain amino acid transport ATP-binding protein 787037..787738 Burkholderia pseudomallei K96243 3096548 YP_110601.1 CDS BPSS0580 NC_006351.1 788473 789708 D N-terinal region is similar to the C-terminal region of Pseudomonas aeruginosa protease LasA SWALL:LASA_PSEAE (SWALL:P14789) (418 aa) fasta scores: E(): 6.2e-10, 29.22% id in 308 aa, and to Achromobacter lyticus beta-lytic metalloendopeptidase precursor SWALL:PRLB_ACHLY (SWALL:P27458) (374 aa) fasta scores: E(): 1.2e-08, 28.85% id in 305 aa; hypothetical protein 788473..789708 Burkholderia pseudomallei K96243 3095825 YP_110602.1 CDS pchA NC_006351.1 790031 791485 R involved in the conversion of chorismate to salicylate; salicylate biosynthesis isochorismate synthase complement(790031..791485) Burkholderia pseudomallei K96243 3095373 YP_110603.1 CDS pchB NC_006351.1 791482 791787 R catalyzes the second reaction in the pyochelin biosynthetic pathway, the conversion of isochorismate to salicylate and pyruvate.; isochorismate-pyruvate lyase complement(791482..791787) Burkholderia pseudomallei K96243 3095362 YP_110604.1 CDS pchC NC_006351.1 791784 792557 R Similar to Pseudomonas aeruginosa pyochelin biosynthetic protein PchC SWALL:Q9HWG2 (EMBL:AE004840) (251 aa) fasta scores: E(): 5.5e-46, 56.17% id in 235 aa, and to Streptomyces avermitilis thioesterase SWALL:Q93H55 (EMBL:AB070951) (249 aa) fasta scores: E(): 1.7e-33, 42.38% id in 243 aa; pyochelin biosynthetic protein complement(791784..792557) Burkholderia pseudomallei K96243 3095359 YP_110605.1 CDS pchD NC_006351.1 792554 794197 R Similar to Pseudomonas aeruginosa salicyl-AMP ligase PchD SWALL:Q9RFM9 (EMBL:AF184620) (547 aa) fasta scores: E(): 1.6e-152, 69.33% id in 538 aa, and to Bacillus subtilis 2,3-dihydroxybenzoate-AMP ligase DhbE or EntE SWALL:DHBE_BACSU (SWALL:P40871) (539 aa) fasta scores: E(): 2.8e-112, 54.63% id in 529 aa; salicyl-AMP ligase complement(792554..794197) Burkholderia pseudomallei K96243 3095360 YP_110606.1 CDS pchR NC_006351.1 794837 795778 D Similar to Pseudomonas aeruginosa AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 1.4e-78, 67.34% id in 297 aa; AraC family transcriptional regulator 794837..795778 Burkholderia pseudomallei K96243 3097119 YP_110607.1 CDS pchE NC_006351.1 795905 800410 D Similar to Pseudomonas aeruginosa pyochelin synthetase PchE SWALL:Q9RFM8 (EMBL:AF184621) (1438 aa) fasta scores: E(): 0, 57.14% id in 1484 aa, and to Yersinia pestis yersiniabactin biosynthetic protein Irp2 or ypo1911 SWALL:Q8ZF24 (EMBL:AJ414150) (2035 aa) fasta scores: E(): 4.3e-111, 35.92% id in 1495 aa; pyochelin synthetase 795905..800410 Burkholderia pseudomallei K96243 3097182 YP_110608.1 CDS pchF NC_006351.1 800407 806454 D Similar to Pseudomonas aeruginosa pyochelin synthetase PchF SWALL:Q9RFM7 (EMBL:AF184622) (1809 aa) fasta scores: E(): 1.1e-173, 56.86% id in 2019 aa. Weakly similar to Yersinia pestis yersiniabactin biosynthetic protein Irp2 or ypo1911 SWALL:Q8ZF24 (EMBL:AJ414150) (2035 aa) fasta scores: E(): 3.8e-91, 29% id in 1958 aa; pyochelin synthetase 800407..806454 Burkholderia pseudomallei K96243 3097195 YP_110609.1 CDS pchG NC_006351.1 806451 807506 D Similar to Pseudomonas aeruginosa reductase required pyochelin biosynthesis PchG SWALL:Q9HWG5 (EMBL:AE004839) (349 aa) fasta scores: E(): 5e-68, 56.81% id in 345 aa, and to Yersinia enterocolitica Irp3 protein SWALL:O54512 (EMBL:Y12527) (365 aa) fasta scores: E(): 4.5e-15, 27.95% id in 347 aa; pyochelin biosynthetic protein 806451..807506 Burkholderia pseudomallei K96243 3097196 YP_110610.1 CDS pchH NC_006351.1 807503 809230 D Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4223 or PchH SWALL:Q9HWG6 (EMBL:AE004839) (570 aa) fasta scores: E(): 3.1e-92, 56.09% id in 574 aa, and to Streptomyces coelicolor ABC transporter ATP-binding protein SCO7689 or SC4C2.24 SWALL:Q9EWN8 (EMBL:AL939132) (608 aa) fasta scores: E(): 5.1e-53, 39.93% id in 571 aa; ATP-binding component of ABC transporter 807503..809230 Burkholderia pseudomallei K96243 3095338 YP_110611.1 CDS pchI NC_006351.1 809227 811011 D Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4222 SWALL:Q9HWG7 (EMBL:AE004839) (574 aa) fasta scores: E(): 2.8e-97, 59.71% id in 556 aa, and to Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein rv1349 or mt1392 or mtcy02b10.13 SWALL:YD49_MYCTU (SWALL:Q11019) (579 aa) fasta scores: E(): 1.2e-33, 32.35% id in 578 aa; ABC transporter ATP-binding protein 809227..811011 Burkholderia pseudomallei K96243 3097118 YP_110612.1 CDS fptA NC_006351.1 811088 813340 D Similar to Pseudomonas aeruginosa Fe(III)-pyochelin receptor precursor FptA SWALL:FPTA_PSEAE (SWALL:P42512) (720 aa) fasta scores: E(): 1.5e-172, 63.05% id in 674 aa, and to the C-terminal region of Pseudomonas aeruginosa ferripyoverdine receptor precursor FpvA SWALL:FPVA_PSEAE (SWALL:P48632) (815 aa) fasta scores: E(): 1.9e-62, 31.42% id in 732 aa. Poor similarity to the P. aeruginosa FptA protein in the N-terminal region. CDS lacks a N-terminal signal sequence, effect on the function of the CDS is not known; Fe(III)-pyochelin receptor 811088..813340 Burkholderia pseudomallei K96243 3095369 YP_110613.1 CDS BPSS0592 NC_006351.1 813340 813606 D Similar to Pseudomonas aeruginosa FptB protein precursor pa4220 SWALL:FPTB_PSEAE (SWALL:P42513) (93 aa) fasta scores: E(): 0.00021, 38.82% id in 85 aa; hypothetical protein 813340..813606 Burkholderia pseudomallei K96243 3095826 YP_110614.1 CDS BPSS0593 NC_006351.1 813608 815122 D Similar to Pseudomonas aeruginosa hypothetical protein pa0801 SWALL:Q9I5D7 (EMBL:AE004515) (506 aa) fasta scores: E(): 1.2e-18, 26.73% id in 520 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa4219 SWALL:Y6B9_PSEAE (SWALL:P42514) (394 aa) fasta scores: E(): 9e-68, 53.62% id in 386 aa; iron-regulated membrane protein 813608..815122 Burkholderia pseudomallei K96243 3095692 YP_110615.1 CDS BPSS0594 NC_006351.1 815139 816410 D Similar to Pseudomonas aeruginosa probable transporter pa4218 SWALL:Q9HWG8 (EMBL:AE004838) (414 aa) fasta scores: E(): 2.8e-105, 71.56% id in 408 aa. N-terminal region is similar to the N-terminal region of Escherichia coli AmpG protein SWALL:AMPG_ECOLI (SWALL:P36670) (491 aa) fasta scores: E(): 7e-12, 24.41% id in 344 aa; hypothetical protein 815139..816410 Burkholderia pseudomallei K96243 3097035 YP_110616.1 CDS BPSS0595 NC_006351.1 816784 817074 R Similar to Synechococcus sp. ferredoxin I PetF SWALL:FER1_SYNP2 (SWALL:P31965) (96 aa) fasta scores: E(): 1.3e-07, 37.93% id in 87 aa, and to Equisetum telmateia ferredoxin I SWALL:FER1_EQUTE (SWALL:P00234) (95 aa) fasta scores: E(): 6.8e-08, 44.3% id in 79 aa; (2Fe-2S)-binding protein complement(816784..817074) Burkholderia pseudomallei K96243 3097036 YP_110617.1 CDS BPSS0596 NC_006351.1 817491 819431 R Similar to Alcaligenes eutrophus acetoin catabolism regulatory protein AcoR SWALL:ACOR_ALCEU (SWALL:P28614) (668 aa) fasta scores: E(): 1.1e-63, 38.95% id in 652 aa, and to Xanthomonas axonopodis transcriptional regulator xac0654 SWALL:AAM35543 (EMBL:AE011694) (661 aa) fasta scores: E(): 2.8e-62, 40.25% id in 641 aa; Fis family transcriptional regulator complement(817491..819431) Burkholderia pseudomallei K96243 3095969 YP_110618.1 CDS BPSS0597 NC_006351.1 819701 819895 D Similar to an internal region of Chlorobium tepidum hypothetical protein CT1731 SWALL:Q8KBQ3 (EMBL:AE012927) (263 aa) fasta scores: E(): 0.99, 35.48% id in 62 aa. Possible gene remnant; hypothetical protein 819701..819895 Burkholderia pseudomallei K96243 3096451 YP_110619.1 CDS BPSS0598 NC_006351.1 820578 820865 D Similar to Ralstonia solanacearum hypothetical protein rsc1512 or rs03792 SWALL:Q8XZ92 (EMBL:AL646065) (92 aa) fasta scores: E(): 3.5e-11, 50.57% id in 87 aa, and to Ralstonia solanacearum hypothetical protein rsc1590 or rs03952 SWALL:Q8XZ16 (EMBL:AL646065) (95 aa) fasta scores: E(): 0.042, 36.47% id in 85 aa. Similar to BPSS0833, 59.140% identity (60.440% ungapped) in 93 aa overlap; hypothetical protein 820578..820865 Burkholderia pseudomallei K96243 3096452 YP_110620.1 CDS BPSS0599 NC_006351.1 820930 821088 D Similar to Oryza sativa protein P0432C03.16 SWALL:Q8S9Q3 (EMBL:AP004031) (56 aa) fasta scores: E(): 2, 39.62% id in 53 aa; hypothetical protein 820930..821088 Burkholderia pseudomallei K96243 3095802 YP_110621.1 CDS BPSS0600 NC_006351.1 821085 821369 D Similar to Rhizobium loti hypothetical protein mll4983 SWALL:Q98CV6 (EMBL:AP003005) (281 aa) fasta scores: E(): 7.3, 34.88% id in 86 aa. Possible gene remnant; hypothetical protein 821085..821369 Burkholderia pseudomallei K96243 3097032 YP_110622.1 CDS BPSS0601 NC_006351.1 821835 823136 R Similar to Ralstonia solanacearum probable transmembrane protein rsp1678 or rs02237 SWALL:Q8XPG3 (EMBL:AL646086) (434 aa) fasta scores: E(): 1.3e-123, 74.76% id in 432 aa, and to Comamonas acidovorans xanthine/uracil permease XprA SWALL:Q8RLB9 (EMBL:AY082333) (433 aa) fasta scores: E(): 3.1e-115, 69.14% id in 431 aa; permease complement(821835..823136) Burkholderia pseudomallei K96243 3097033 YP_110623.1 CDS BPSS0602 NC_006351.1 823379 824005 D Poor database matches. Weakly similar to the C-terminal region of Caulobacter crescentus hypothetical protein cc3240 SWALL:Q9A3G4 (EMBL:AE005988) (318 aa) fasta scores: E(): 1.5e-16, 29.63% id in 189 aa; hypothetical protein 823379..824005 Burkholderia pseudomallei K96243 3096114 YP_110624.1 CDS BPSS0603 NC_006351.1 824839 825141 D hypothetical protein 824839..825141 Burkholderia pseudomallei K96243 3097067 YP_110625.1 CDS BPSS0604 NC_006351.1 825949 826335 R C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc0324 or rs03291 SWALL:Q8Y2L1 (EMBL:AL646058) (119 aa) fasta scores: E(): 0.0023, 31.31% id in 99 aa. Possible alternative translational start site; hypothetical protein complement(825949..826335) Burkholderia pseudomallei K96243 3097068 YP_110626.1 CDS BPSS0605 NC_006351.1 827078 827803 R Similar to Rhizobium meliloti hypothetical membrane protein rb0104 or smb20104 SWALL:Q92X58 (EMBL:AL603642) (252 aa) fasta scores: E(): 9.9e-15, 27.61% id in 239 aa, and to Methanosarcina acetivorans hypothetical protein ma1331 SWALL:Q8TR53 (EMBL:AE010803) (243 aa) fasta scores: E(): 6.6e-09, 24.18% id in 244 aa; hypothetical protein complement(827078..827803) Burkholderia pseudomallei K96243 3095374 YP_110627.1 CDS BPSS0606 NC_006351.1 827920 828819 D Similar to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.3e-25, 30.16% id in 295 aa, and to Pseudomonas fluorescens positive transcriptional regulator PhnR SWALL:O69758 (EMBL:L49465) (299 aa) fasta scores: E(): 1.2e-48, 47.6% id in 292 aa; LysR family regulatory protein 827920..828819 Burkholderia pseudomallei K96243 3097057 YP_110628.1 CDS BPSS0607 NC_006351.1 828849 830321 R Similar to Streptococcus mutans NADP-dependent glyceraldehyde-3-phosphate dehydrogenase GapN SWALL:GAPN_STRMU (SWALL:Q59931) (475 aa) fasta scores: E(): 3.7e-47, 35.91% id in 426 aa, and to Rhizobium meliloti aldehyde dehydrogenase rb0979 or smb21539 SWALL:Q92UV7 (EMBL:AL603645) (485 aa) fasta scores: E(): 2.4e-85, 50.43% id in 456 aa. Also similar to BPSS0349 (482 aa) fasta scores: E(): 3.1e-100, 59.244% identity in 476 aa overlap; aldehyde dehydrogenase complement(828849..830321) Burkholderia pseudomallei K96243 3097058 YP_110629.1 CDS BPSS0608 NC_006351.1 830360 831238 R Similar to Alcaligenes eutrophus alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase TfdA SWALL:TFDA_ALCEU (SWALL:P10088) (287 aa) fasta scores: E(): 1.4e-20, 30.76% id in 260 aa, and to Pseudomonas aeruginosa hypothetical protein pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 5.4e-31, 35.94% id in 281 aa; TauD/TfdA family dioxygenase complement(830360..831238) Burkholderia pseudomallei K96243 3095794 YP_110630.1 CDS BPSS0609 NC_006351.1 831174 832406 R Similar to Streptomyces wedmorensis phosphonopyruvate decarboxylase Fom2 SWALL:Q56190 (EMBL:AB016934) (384 aa) fasta scores: E(): 3.2e-56, 47.48% id in 377 aa, and to Streptomyces viridochromogenes 3-phosphonopyruvate decarboxylase Ppd SWALL:O86938 (EMBL:Y14337) (397 aa) fasta scores: E(): 8.5e-37, 38.51% id in 405 aa; thiamine pyrophosphate enzyme family protein complement(831174..832406) Burkholderia pseudomallei K96243 3097101 YP_110631.1 CDS BPSS0610 NC_006351.1 832403 833314 R Similar to Tetrahymena pyriformis phosphoenolpyruvate phosphomutase precursor PepM SWALL:PEPM_TETPY (SWALL:P33182) (300 aa) fasta scores: E(): 5e-19, 32.05% id in 287 aa, and to he c-terminal region of Bacteroides fragilis phosphoenolpyruvate phosphomutase AepX SWALL:Q9F765 (EMBL:AF285774) (433 aa) fasta scores: E(): 1.7e-55, 52% id in 300 aa; phosphoenolpyruvate phosphomutase complement(832403..833314) Burkholderia pseudomallei K96243 3097102 YP_110632.1 CDS BPSS0611 NC_006351.1 833782 834690 R Similar to Pseudomonas aeruginosa hypothetical protein pa3325 SWALL:Q9HYS0 (EMBL:AE004754) (295 aa) fasta scores: E(): 1.1e-59, 48.46% id in 293 aa, and to Streptomyces coelicolor hypothetical protein SCO2221 or SC10B7.16 SWALL:Q9KZ16 (EMBL:AL939111) (296 aa) fasta scores: E(): 6.6e-46, 43.86% id in 285 aa. Similar to BPSS1223, 74.150% identity (74.150% ungapped) in 294 aa overlap; hypothetical protein complement(833782..834690) Burkholderia pseudomallei K96243 3097083 YP_110633.1 CDS BPSS0612 NC_006351.1 834728 836518 R Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa3324 SWALL:Q9HYS1 (EMBL:AE004754) (592 aa) fasta scores: E(): 9.2e-113, 50.42% id in 593 aa, and to Streptomyces coelicolor oxidoreductase SCO3954 or SCD78.21c SWALL:Q9ZBX8 (EMBL:AL939118) (585 aa) fasta scores: E(): 4.4e-107, 50.69% id in 578 aa; short chain dehydrogenase complement(834728..836518) Burkholderia pseudomallei K96243 3097045 YP_110634.1 CDS BPSS0613 NC_006351.1 836572 837459 R Similar to Pseudomonas aeruginosa hypothetical protein pa3323 SWALL:Q9HYS2 (EMBL:AE004754) (291 aa) fasta scores: E(): 2.2e-70, 62.72% id in 279 aa, and to the C-terminal region of Streptomyces coelicolor hypothetical protein SCO3955 or SCD78.22c SWALL:Q9ZBX7 (EMBL:AL939118) (339 aa) fasta scores: E(): 5e-56, 53.65% id in 274 aa; hypothetical protein complement(836572..837459) Burkholderia pseudomallei K96243 3097046 YP_110635.1 CDS BPSS0614 NC_006351.1 837977 838747 R Similar to thye C-terminal region of Homo sapiens erythrocyte band 7 integral membrane protein EPB72 or BND7 SWALL:BAN7_HUMAN (SWALL:P27105) (287 aa) fasta scores: E(): 4.9e-39, 48.99% id in 249 aa, and to the full length Ralstonia solanacearum stomatin-like transmembrane protein rsc0802 or rs05031 SWALL:Q8Y188 (EMBL:AL646061) (249 aa) fasta scores: E(): 2.3e-66, 76.73% id in 245 aa; hypothetical protein complement(837977..838747) Burkholderia pseudomallei K96243 3095500 YP_110636.1 CDS BPSS0615 NC_006351.1 838747 840261 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0803 or rs05027 SWALL:Q8Y187 (EMBL:AL646061) (470 aa) fasta scores: E(): 1.6e-74, 58.71% id in 465 aa, and to Rhizobium meliloti probable membrane protein necessary for nodulation competitiveness NfeD or rb1115 or smb20990 SWALL:Q92UL2 (EMBL:AL603646) (478 aa) fasta scores: E(): 2.6e-56, 47.78% id in 475 aa; hypothetical protein complement(838747..840261) Burkholderia pseudomallei K96243 3095770 YP_110637.1 CDS BPSS0616 NC_006351.1 840345 841472 R Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 5.3e-14, 25% id in 332 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0653 or rs05569 SWALL:Q8XS28 (EMBL:AL646080) (387 aa) fasta scores: E(): 5.1e-89, 64.85% id in 350 aa. Possible alternative translational start site; AraC family transcriptional regulator complement(840345..841472) Burkholderia pseudomallei K96243 3095771 YP_110638.1 CDS BPSS0617 NC_006351.1 841572 842705 D Similar to the C-terminal region of Homo sapiens acyl-CoA dehydrogenase, short-chain specific, mitochondrial precursor ACSDS SWALL:ACDS_HUMAN (SWALL:P16219) (412 aa) fasta scores: E(): 5.4e-64, 48.51% id in 371 aa, and to the full length Ralstonia solanacearum probable acyl-CoA dehydrogenase oxidoreductase rsp0652 or rs05570 SWALL:Q8XS29 (EMBL:AL646080) (377 aa) fasta scores: E(): 2.2e-119, 79.57% id in 377 aa; acyl-CoA dehydrogenase 841572..842705 Burkholderia pseudomallei K96243 3097098 YP_110639.1 CDS BPSS0618 NC_006351.1 843109 844812 D Similar to Ralstonia solanacearum probable acetyl-coenzyme A synthetase rsp0651 or rs05571 SWALL:Q8XS30 (EMBL:AL646080) (567 aa) fasta scores: E(): 2.8e-165, 75.22% id in 561 aa, and to Streptomyces coelicolor acetyl-coenzyme A synthetase SCO6195 or SC2G5.16 SWALL:Q9Z5A7 (EMBL:AL939126) (558 aa) fasta scores: E(): 1.1e-118, 58.46% id in 561 aa; AMP-binding protein 843109..844812 Burkholderia pseudomallei K96243 3096614 YP_110640.1 CDS mmsA NC_006351.1 844881 846410 D Similar to Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] MmsA SWALL:MMSA_PSEAE (SWALL:P28810) (496 aa) fasta scores: E(): 6.6e-114, 58.46% id in 496 aa, and to Ralstonia solanacearum probable methylmalonate-semialdehyde dehydrogenase oxidoreductase rsp0650 or rs05572 SWALL:Q8XS31 (EMBL:AL646080) (515 aa) fasta scores: E(): 3.2e-161, 80.86% id in 507 aa; methylmalonate-semialdehyde dehydrogenase 844881..846410 Burkholderia pseudomallei K96243 3095313 YP_110641.1 CDS mmsB NC_006351.1 846522 847418 D Similar to Pseudomonas aeruginosa 3-hydroxyisobutyrate dehydrogenase MmsB SWALL:MMSB_PSEAE (SWALL:P28811) (298 aa) fasta scores: E(): 1.5e-44, 50.33% id in 300 aa, and to Ralstonia solanacearum probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase rsp0649 or rs05573 SWALL:Q8XS32 (EMBL:AL646080) (298 aa) fasta scores: E(): 1e-72, 73.89% id in 295 aa; 3-hydroxyisobutyrate dehydrogenase 846522..847418 Burkholderia pseudomallei K96243 3096485 YP_110642.1 CDS BPSS0621 NC_006351.1 847418 848212 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 847418..848212 Burkholderia pseudomallei K96243 3096615 YP_110643.1 CDS BPSS0622 NC_006351.1 848209 849357 D Similar to Homo sapiens 3-hydroxyisobutyryl-coenzyme A hydrolase SWALL:Q92931 (EMBL:U66669) (381 aa) fasta scores: E(): 3.2e-33, 36.24% id in 367 aa, and to Ralstonia solanacearum enoyl-coenzyme A hydratase rsp0647 or rs05575 SWALL:Q8XS34 (EMBL:AL646080) (390 aa) fasta scores: E(): 9e-102, 71.77% id in 372 aa; enoyl-CoA hydratase 848209..849357 Burkholderia pseudomallei K96243 3094974 YP_110644.1 CDS BPSS0623 NC_006351.1 849810 851192 R Similar to Pseudomonas aeruginosa outer membrane protein OprJ SWALL:OPRJ_PSEAE (SWALL:Q51397) (479 aa) fasta scores: E(): 5.6e-27, 30.22% id in 450 aa, and to Ralstonia solanacearum outer membrane multidrug resistance lipoprotein rsc1854 or rs05605 SWALL:Q8XYA8 (EMBL:AL646067) (475 aa) fasta scores: E(): 1.8e-29, 29.55% id in 467 aa; outer membrane efflux protein complement(849810..851192) Burkholderia pseudomallei K96243 3095502 YP_110645.1 CDS macB NC_006351.1 851202 853163 R Similar to Escherichia coli macrolide-specific ABC-type efflux carrier MacB SWALL:MACB_ECOLI (SWALL:P75831) (648 aa) fasta scores: E(): 7.7e-128, 59.35% id in 652 aa, and to Yersinia pestis ABC transporter ATP-binding protein ypo1365 SWALL:Q8ZGD7 (EMBL:AJ414148) (649 aa) fasta scores: E(): 9.7e-131, 59.01% id in 649 aa; macrolide-specific ABC-type efflux carrier complement(851202..853163) Burkholderia pseudomallei K96243 3096996 YP_110646.1 CDS BPSS0625 NC_006351.1 853166 854368 R Similar to Escherichia coli macrolide-specific efflux protein MacA SWALL:MACA_ECOLI (SWALL:P75830) (371 aa) fasta scores: E(): 3e-34, 43.33% id in 390 aa, and to Pseudomonas syringae periplasmic protein SWALL:Q93NK1 (EMBL:AF372703) (389 aa) fasta scores: E(): 9.4e-54, 52.04% id in 367 aa; drug-efflux protein complement(853166..854368) Burkholderia pseudomallei K96243 3095503 YP_110647.1 CDS BPSS0626 NC_006351.1 854697 855791 D Similar to Pseudomonas putida alkanesulfonate monooxygenase SsuD or DsuD SWALL:SSUD_PSEPU (SWALL:O85764) (382 aa) fasta scores: E(): 2.8e-19, 28.99% id in 369 aa, and to Pseudomonas aeruginosa hypothetical protein pa3954 SWALL:Q9HX62 (EMBL:AE004813) (364 aa) fasta scores: E(): 1.9e-115, 79.94% id in 364 aa; luciferase-like monooxygenase 854697..855791 Burkholderia pseudomallei K96243 3096688 YP_110648.1 CDS BPSS0627 NC_006351.1 856170 856892 D Similar to Escherichia coli ribonuclease I precursor Rna or RnsA SWALL:RNI_ECOLI (SWALL:P21338) (268 aa) fasta scores: E(): 4.5e-08, 30.29% id in 241 aa, and to Rhizobium meliloti ribonuclease r02202 or smc02819 SWALL:Q92NJ8 (EMBL:AL591789) (255 aa) fasta scores: E(): 4.3e-16, 30.17% id in 232 aa; ribonuclease 856170..856892 Burkholderia pseudomallei K96243 3096094 YP_110649.1 CDS glsA NC_006351.1 857404 858318 R catalyzes the formation of glutamate from glutamine; glutaminase complement(857404..858318) Burkholderia pseudomallei K96243 3095799 YP_110650.1 CDS BPSS0629 NC_006351.1 858363 858671 D hypothetical protein 858363..858671 Burkholderia pseudomallei K96243 3096095 YP_110651.1 CDS BPSS0630 NC_006351.1 858794 859504 D Similar to Escherichia coli, Salmonella typhimurium, Salmonella typhi and Shigella flexneri transcriptional regulatory protein OmpR SWALL:OMPR_ECOLI (SWALL:P03025) (239 aa) fasta scores: E(): 7.1e-29, 43.53% id in 232 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa1157 SWALL:Q9I4I0 (EMBL:AE004546) (236 aa) fasta scores: E(): 5.4e-43, 54.14% id in 229 aa; response regulator protein 858794..859504 Burkholderia pseudomallei K96243 3094956 YP_110652.1 CDS BPSS0631 NC_006351.1 859892 861007 D No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Escherichia coli sensor protein CpxA or EcfB or Ssd or Eup SWALL:CPXA_ECOLI (SWALL:P08336) (457 aa) fasta scores: E(): 9.9e-15, 31.93% id in 238 aa, and to Pseudomonas aeruginosa probable two-component sensor pa1798 SWALL:Q9I2U4 (EMBL:AE004606) (428 aa) fasta scores: E(): 1.7e-33, 39.17% id in 291 aa. Possible alternative translational start site; sensor protein 859892..861007 Burkholderia pseudomallei K96243 3095623 YP_110653.2 CDS BPSS0632 NC_006351.1 861344 864193 R Similar to Pseudomonas aeruginosa hypothetical protein pa3339 SWALL:Q9HYQ6 (EMBL:AE004756) (728 aa) fasta scores: E(): 6.6e-53, 34.01% id in 729 aa, and to Vibrio cholerae hypothetical protein vc0603 SWALL:Q9KUB9 (EMBL:AE004145) (764 aa) fasta scores: E(): 7.6e-43, 32.18% id in 755 aa. Possible alternative translational start site; patatin-like phospholipase complement(861344..864193) Burkholderia pseudomallei K96243 3095624 YP_110654.1 CDS mreB NC_006351.1 864490 865554 D Similar to Escherichia coli, Salmonella typhimurium, Salmonella typhi, and Shigella flexneri rod shape-determining protein MreB SWALL:MREB_ECOLI (SWALL:P13519) (347 aa) fasta scores: E(): 3.8e-57, 51.43% id in 348 aa, and to Ralstonia solanacearum probable rod shape-determining protein rsc0059 or rs01882 SWALL:Q8Y3C1 (EMBL:AL646057) (347 aa) fasta scores: E(): 3.5e-63, 54.95% id in 333 aa. Similar to BPSL0186, 54.955% identity (54.955% ungapped) in 333 aa overlap; rod shape-determining protein MreB 864490..865554 Burkholderia pseudomallei K96243 3095136 YP_110655.1 CDS BPSS0634 NC_006351.1 866105 866695 D Similar to Pseudomonas aeruginosa hypothetical protein pa1878 SWALL:Q9I2L9 (EMBL:AE004614) (192 aa) fasta scores: E(): 2e-51, 69.84% id in 189 aa, and to Agrobacterium tumefaciens hypothetical protein SWALL:Q9R6H4 (EMBL:AB016260) (222 aa) fasta scores: E(): 8.6e-14, 36.41% id in 184 aa; hypothetical protein 866105..866695 Burkholderia pseudomallei K96243 3096695 YP_110656.1 CDS BPSS0635 NC_006351.1 867006 869135 D C-terminal region is similar to Rhizobium loti hypothetical protein mll0692 SWALL:Q98M80 (EMBL:AP002995) (660 aa) fasta scores: E(): 1.1e-110, 53.38% id in 665 aa. Full length CDS is similar to Bacillus halodurans hypothetical protein bh3691 SWALL:Q9K6N7 (EMBL:AP001519) (702 aa) fasta scores: E(): 5.2e-74, 35.78% id in 693 aa; hypothetical protein 867006..869135 Burkholderia pseudomallei K96243 3096696 YP_110657.1 CDS BPSS0636 NC_006351.1 869231 869494 D Poor database matches. Similar to the C-terminal region of Myxococcus xanthus RNA polymerase sigma factor CarQ SWALL:CARQ_MYXXA (SWALL:Q06909) (174 aa) fasta scores: E(): 6.7, 32.91% id in 79 aa; hypothetical protein 869231..869494 Burkholderia pseudomallei K96243 3095865 YP_110658.1 CDS BPSS0639 NC_006351.1 871103 871579 D Similar to Pseudomonas putida glyoxalase pp3444 SWALL:AAN69046 (EMBL:AE016786) (159 aa) fasta scores: E(): 3.9e-25, 51.92% id in 156 aa, and to Ralstonia solanacearum hypothetical protein rsc0107 or rs00977 SWALL:Q8Y374 (EMBL:AL646057) (159 aa) fasta scores: E(): 2e-24, 47.61% id in 147 aa; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 871103..871579 Burkholderia pseudomallei K96243 3095505 YP_110659.1 CDS BPSS0640 NC_006351.1 871888 872547 D Similar to Zea mays glutathione S-transferase III Gst3 SWALL:GTH3_MAIZE (SWALL:P04907) (221 aa) fasta scores: E(): 2e-05, 30.18% id in 212 aa, and to Rhizobium meliloti glutathione S-transferase r02060 or smc04321 SWALL:Q92NV7 (EMBL:AL591789) (224 aa) fasta scores: E(): 1.3e-36, 48.59% id in 214 aa; glutathione S-transferase 871888..872547 Burkholderia pseudomallei K96243 3096330 YP_110660.1 CDS BPSS0641 NC_006351.1 872588 873298 D Similar to Rhizobium meliloti hypothetical protein r02087 or smc01408 SWALL:Q92NT5 (EMBL:AL591789) (236 aa) fasta scores: E(): 4.6e-66, 67.09% id in 234 aa, and to Rhizobium loti hypothetical protein mll2522 SWALL:Q98I82 (EMBL:AP002999) (273 aa) fasta scores: E(): 1.9e-20, 41.42% id in 239 aa; hypothetical protein 872588..873298 Burkholderia pseudomallei K96243 3095874 YP_110661.1 CDS BPSS0642 NC_006351.1 875199 876578 R Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 4.6e-27, 32.08% id in 452 aa, and to Ralstonia solanacearum probable transmembrane two-component sensor kinase transcription regulator protein rsp1553 or rs02109 SWALL:Q8XPT4 (EMBL:AL646085) (438 aa) fasta scores: E(): 9.4e-50, 41.34% id in 445 aa; sensor kinase complement(875199..876578) Burkholderia pseudomallei K96243 3095875 YP_110662.1 CDS BPSS0643 NC_006351.1 876575 877237 R Similar to Salmonella typhimurium transcriptional regulatory protein BasR or PmrA or ParA SWALL:BASR_SALTY (SWALL:P36556) (222 aa) fasta scores: E(): 1.2e-38, 50.46% id in 214 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3404 or rs01713 SWALL:Q8XTZ1 (EMBL:AL646075) (221 aa) fasta scores: E(): 1.1e-43, 55% id in 220 aa. Simlar to BPSL0806, self_match.tab 935589:936422 forward MW:3 (278 aa) initn: 837 init1: 837 opt: 839 Z-score: 811.0 bits: 157.5 E(): 1.3e-39 Smith-Waterman score: 839; 59.259% identity (59.259% ungapped) in 216 aa overlap; response regulator protein complement(876575..877237) Burkholderia pseudomallei K96243 3095245 YP_110663.1 CDS BPSS0644 NC_006351.1 877398 878258 D Similar to Rhizobium loti hypothetical protein mlr5989 SWALL:Q98AI2 (EMBL:AP003008) (293 aa) fasta scores: E(): 1.2e-27, 35.12% id in 279 aa, and to Ralstonia solanacearum hypothetical protein rsc0081 or rs02255 SWALL:Q8Y399 (EMBL:AL646057) (300 aa) fasta scores: E(): 3.8e-24, 34.04% id in 282 aa; DNA-binding protein 877398..878258 Burkholderia pseudomallei K96243 3095224 YP_110664.1 CDS BPSS0645 NC_006351.1 878644 878913 D Weakly similar to Salmonella typhi hypothetical protein sty2195 SWALL:Q8Z5Q9 (EMBL:AL627272) (81 aa) fasta scores: E(): 0.066, 38.33% id in 60 aa, and to Escherichia coli hypothetical protein YodC SWALL:YODC_ECOLI (SWALL:P76331) (60 aa) fasta scores: E(): 0.098, 40.74% id in 54 aa; hypothetical protein 878644..878913 Burkholderia pseudomallei K96243 3095225 YP_110665.1 CDS BPSS0646 NC_006351.1 879145 879471 R C-terminal region is similar to Bacteriophage T4 immunity protein Imm SWALL:IMM_BPT4 (SWALL:P08986) (83 aa) fasta scores: E(): 0.004, 40.35% id in 57 aa, and to Bacteriophage T2 ORF42.1 SWALL:Q38392 (EMBL:Z35073) (83 aa) fasta scores: E(): 0.0055, 36.36% id in 55 aa; hypothetical protein complement(879145..879471) Burkholderia pseudomallei K96243 3095713 YP_110666.1 CDS BPSS0647 NC_006351.1 879561 880028 R Similar to Escherichia coli O157:H7 hypothetical protein Z2165 SWALL:Q8X475 (EMBL:AE005351) (131 aa) fasta scores: E(): 9.3e-29, 60.46% id in 129 aa, and to the C-terminal region of Vibrio cholerae hypothetical protein vca1053 SWALL:Q9KKP9 (EMBL:AE004431) (166 aa) fasta scores: E(): 1.8e-29, 62.69% id in 126 aa; hypothetical protein complement(879561..880028) Burkholderia pseudomallei K96243 3095859 YP_110667.1 CDS ftrA NC_006351.1 880135 881091 D upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; transcriptional activator FtrA 880135..881091 Burkholderia pseudomallei K96243 3095860 YP_110668.1 CDS BPSS0649 NC_006351.1 881655 882119 D Poor database matches. Weakly similar to Rhizobium etli hypothetical protein SWALL:AAM54839 (EMBL:U80928) (157 aa) fasta scores: E(): 6.4, 28.14% id in 135 aa; hypothetical protein 881655..882119 Burkholderia pseudomallei K96243 3095196 YP_110669.1 CDS BPSS0650 NC_006351.1 882183 883634 D Similar to Xanthomonas axonopodis succinyl-diaminopimelate desuccinylase xac2952 SWALL:AAM37797 (EMBL:AE011937) (497 aa) fasta scores: E(): 6e-105, 56.72% id in 476 aa, and to Xanthomonas campestris succinyl-diaminopimelate desuccinylase xcc2782 SWALL:AAM42054 (EMBL:AE012391) (497 aa) fasta scores: E(): 7.9e-104, 56.51% id in 476 aa; peptidase 882183..883634 Burkholderia pseudomallei K96243 3095610 YP_110670.1 CDS BPSS0651 NC_006351.1 883744 884112 D Similar to Ralstonia solanacearum hypothetical protein rsc0090 or rs02263 SWALL:Q8Y390 (EMBL:AL646057) (152 aa) fasta scores: E(): 3.1e-12, 45.94% id in 111 aa, and to Rhizobium loti hypothetical protein mlr0026 SWALL:Q98NQ9 (EMBL:AP002994) (107 aa) fasta scores: E(): 5e-08, 32.03% id in 103 aa; hypothetical protein 883744..884112 Burkholderia pseudomallei K96243 3095611 YP_110671.1 CDS BPSS0652 NC_006351.1 884644 885222 D Similar to Rhizobium meliloti membrane protein, similar to periplasmic nitrate reductase NnuR rb1123 or smb20997 SWALL:Q92UK4 (EMBL:AL603646) (194 aa) fasta scores: E(): 1e-25, 40.31% id in 191 aa, and to Caulobacter crescentus hypothetical protein CC0706 SWALL:Q9AAA0 (EMBL:AE005745) (188 aa) fasta scores: E(): 3.6e-25, 42.48% id in 193 aa; hypothetical protein 884644..885222 Burkholderia pseudomallei K96243 3095595 YP_110673.2 CDS BPSS0654 NC_006351.1 886733 888697 D catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase 886733..888697 Burkholderia pseudomallei K96243 3096867 YP_110674.1 CDS BPSS0655 NC_006351.1 888951 890615 D Similar to Bradyrhizobium japonicum hypothetical protein bll5514 SWALL:BAC50779 (EMBL:AP005955) (520 aa) fasta scores: E(): 2e-18, 30.07% id in 562 aa, and to Caulobacter crescentus hypothetical protein CC3418 SWALL:Q9A2Y8 (EMBL:AE006002) (504 aa) fasta scores: E(): 4.7e-17, 29.55% id in 538 aa; hypothetical protein 888951..890615 Burkholderia pseudomallei K96243 3095544 YP_110675.1 CDS BPSS0656 NC_006351.1 890647 891024 D hypothetical protein 890647..891024 Burkholderia pseudomallei K96243 3095562 YP_110676.1 CDS BPSS0658 NC_006351.1 892577 894607 D hypothetical protein 892577..894607 Burkholderia pseudomallei K96243 3096281 YP_110677.1 CDS BPSS0659 NC_006351.1 894966 895400 D Similar to Agrobacterium tumefaciens VirA/G regulated gene VirK SWALL:O50246 (EMBL:AF034769) (144 aa) fasta scores: E(): 1.4e-09, 29.92% id in 137 aa, and to Xanthomonas campestris VirK protein xcc0418 SWALL:Q8PDC2 (EMBL:AE012139) (143 aa) fasta scores: E(): 2.2e-10, 36.05% id in 147 aa; hypothetical protein 894966..895400 Burkholderia pseudomallei K96243 3095532 YP_110678.1 CDS BPSS0663 NC_006351.1 897761 898156 D Similar to the C-terminal regions of Escherichia coli adhesin AIDA-I SWALL:AIDA_ECOLI (SWALL:Q03155) (1286 aa) fasta scores: E(): 0.62, 29.31% id in 116 aa, and to Pseudomonas aeruginosa probable adhesin pa4082 SWALL:Q9HWU6 (EMBL:AE004824) (1018 aa) fasta scores: E(): 0.16, 27.13% id in 129 aa. Possible gene remnant; hypothetical protein 897761..898156 Burkholderia pseudomallei K96243 3096599 YP_110679.1 CDS BPSS0664 NC_006351.1 898946 899656 D Similar to Escherichia coli and Shigella flexneri transcriptional regulatory protein CpxR SWALL:CPXR_ECOLI (SWALL:P16244) (232 aa) fasta scores: E(): 1.3e-13, 29.53% id in 237 aa, and to Salmonella typhi two-component response regulatory protein sty3812 SWALL:Q8Z2W2 (EMBL:AL627279) (232 aa) fasta scores: E(): 9.6e-14, 29.53% id in 237 aa; response regulator protein 898946..899656 Burkholderia pseudomallei K96243 3095402 YP_110680.1 CDS BPSS0665 NC_006351.1 901100 901996 D Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 4.9e-32, 37.23% id in 282 aa, and to Pseudomonas aeruginosa hypothetical protein pa0193 SWALL:Q9I6U1 (EMBL:AE004457) (300 aa) fasta scores: E(): 2e-61, 54.54% id in 286 aa; alpha-ketoglutarate-dependent taurine dioxygenase 901100..901996 Burkholderia pseudomallei K96243 3095541 YP_110681.1 CDS BPSS0666 NC_006351.1 902357 904294 R Subfamily M9A unassigned peptidase. C-terminal region is similar to an internal region of Vibrio alginolyticus microbial collagenase precursor SWALL:COLA_VIBAL (SWALL:P43154) (814 aa) fasta scores: E(): 1.8e-54, 32.52% id in 578 aa, and to the C-terminal region of Vibrio parahaemolyticus microbial collagenase precursor PrtVp SWALL:COLA_VIBPA (SWALL:Q56696) (587 aa) fasta scores: E(): 9.3e-48, 33.21% id in 545 aa. Similar to BPSS0827, 81.329% identity (81.458% ungapped) in 632 aa overlap; collagenase complement(902357..904294) Burkholderia pseudomallei K96243 3095568 YP_110682.1 CDS BPSS0668 NC_006351.1 905027 905245 D Similar to Xanthomonas campestris hypothetical protein xcc1648 SWALL:AAM40942 (EMBL:AE012266) (78 aa) fasta scores: E(): 4e-05, 43.54% id in 62 aa, and to an internal region of Pseudomonas aeruginosa hypothetical protein pa3012 SWALL:Q9HZJ4 (EMBL:AE004726) (124 aa) fasta scores: E(): 6.1e-09, 61.01% id in 59 aa; hypothetical protein 905027..905245 Burkholderia pseudomallei K96243 3095438 YP_110683.1 CDS BPSS0669 NC_006351.1 905454 906683 R Similar to Salmonella typhimurium cytoplasmic protein stm0986 SWALL:Q8ZQC1 (EMBL:AE008742) (410 aa) fasta scores: E(): 4.1e-83, 52.03% id in 394 aa, and to Escherichia coli hypothetical protein YcaQ SWALL:YCAQ_ECOLI (SWALL:P75843) (410 aa) fasta scores: E(): 1.1e-82, 51.64% id in 395 aa; hypothetical protein complement(905454..906683) Burkholderia pseudomallei K96243 3095202 YP_110684.1 CDS BPSS0670 NC_006351.1 907100 908497 R Similar to Rhizobium loti multidrug efflux protein mll8348 SWALL:Q983F7 (EMBL:AP003013) (473 aa) fasta scores: E(): 1.6e-74, 46.01% id in 452 aa, and to Xanthomonas axonopodis drug resistance translocase xac2494 SWALL:AAM37345 (EMBL:AE011887) (471 aa) fasta scores: E(): 2.5e-64, 43.13% id in 459 aa; transporter protein complement(907100..908497) Burkholderia pseudomallei K96243 3095203 YP_110685.3 CDS BPSS0671 NC_006351.1 909175 910872 D Similar to Escherichia coli periplasmic trehalase precursor TreA or OsmA SWALL:TREA_ECOLI (SWALL:P13482) (565 aa) fasta scores: E(): 7.9e-103, 55.96% id in 495 aa, and to Ralstonia solanacearum probable periplasmic alpha,alpha-trehalase signal peptide protein rsp0277 or rs03687 SWALL:Q8XT38 (EMBL:AL646077) (551 aa) fasta scores: E(): 1.1e-134, 68.56% id in 528 aa. CDS is extended at the N-terminus in comparison to orthologues and lacks an N-terminal signal sequence; the effect on the function of CDS is not known; trehalase 909175..910872 Burkholderia pseudomallei K96243 3096110 YP_110686.1 CDS BPSS0672 NC_006351.1 911273 912085 D Weakly similar to Pseudomonas putida formate/nitrite transporter family transporter protein PP1156 SWALL:AAN66781 (EMBL:AE016778) (298 aa) fasta scores: E(): 0.11, 22.69% id in 260 aa. Possible alternative translational start site. C-terminal region is similar to the C-terminal region of Similar to Pseudomonas putida membrane protein PP1696 SWALL:AAN67317 (EMBL:AE016780) (392 aa) fasta scores: E(): 0.91, 28.19% id in 227 aa. Possible gene remnant; hypothetical protein 911273..912085 Burkholderia pseudomallei K96243 3096127 YP_110687.1 CDS BPSS0673 NC_006351.1 912150 912743 D Similar to the C-terminal region of Synechocystis sp. cytochrome c oxidase polypeptide III CtaE SWALL:COX3_SYNY3 (SWALL:Q06475) (233 aa) fasta scores: E(): 2.1e-12, 31.79% id in 173 aa, and to the full length Bradyrhizobium japonicum nitric oxide reductase subunit E blr3212 SWALL:BAC48477 (EMBL:AP005946) (191 aa) fasta scores: E(): 2e-21, 39.44% id in 180 aa; cytochrome c oxidase subunit III protein 912150..912743 Burkholderia pseudomallei K96243 3096128 YP_110688.1 CDS BPSS0674 NC_006351.1 912765 913067 D Similar to Pseudomonas fluorescens NirP protein SWALL:Q9F0X2 (EMBL:AF197466) (81 aa) fasta scores: E(): 3.9, 29.87% id in 77 aa; hypothetical protein 912765..913067 Burkholderia pseudomallei K96243 3095548 YP_110689.1 CDS BPSS0675 NC_006351.1 913160 914050 R Similar to Burkholderia cepacia genomovar III regulatory protein SWALL:Q8VP25 (EMBL:AY028431) (302 aa) fasta scores: E(): 7.8e-78, 66% id in 303 aa. C-terminal region is similar to Pseudomonas aeruginosa transcriptional activator protein LasR SWALL:LASR_PSEAE (SWALL:P25084) (239 aa) fasta scores: E(): 4.6e-05, 25.1% id in 243 aa; GerR family regulatory protein complement(913160..914050) Burkholderia pseudomallei K96243 3095090 YP_110690.1 CDS BPSS0676 NC_006351.1 914574 915398 D Similar to Burkholderia cepacia genomovar III regulatory protein SWALL:Q8VP24 (EMBL:AY028431) (277 aa) fasta scores: E(): 1.3e-55, 56.27% id in 279 aa. C-terminal region is weakly similar to the C-terminal region of Pseudomonas aeruginosa transcriptional activator protein LasR SWALL:LASR_PSEAE (SWALL:P25084) (239 aa) fasta scores: E(): 6.5, 21.59% id in 213 aa; hypothetical protein 914574..915398 Burkholderia pseudomallei K96243 3095091 YP_110691.1 CDS BPSS0677 NC_006351.1 915616 917586 D Similar to Burkholderia cepacia genomovar III asparagine synthetase SWALL:Q8VP10 (EMBL:AY028431) (656 aa) fasta scores: E(): 6e-206, 74.54% id in 656 aa. N-terminal region is similar to the N-terminal region of Bacillus subtilis asparagine synthetase [glutamine-hydrolyzing] 2 AsnH SWALL:ASNH_BACSU (SWALL:P42113) (747 aa) fasta scores: E(): 4.6e-23, 27.93% id in 605 aa; asparagine synthetase 915616..917586 Burkholderia pseudomallei K96243 3095912 YP_110692.1 CDS BPSS0679 NC_006351.1 918753 920984 R Similar to Brevundimonas diminuta isoquinoline 1-oxidoreductase beta subunit IorB SWALL:IORB_BREDI (SWALL:Q51698) (781 aa) fasta scores: E(): 4e-14, 34.82% id in 784 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1880 SWALL:Q9I2L7 (EMBL:AE004614) (731 aa) fasta scores: E(): 0, 79.26% id in 738 aa; oxidoreductase subunit beta complement(918753..920984) Burkholderia pseudomallei K96243 3095496 YP_110693.1 CDS BPSS0680 NC_006351.1 920987 921448 R Similar to Brevundimonas diminuta isoquinoline 1-oxidoreductase alpha subunit IorA SWALL:IORA_BREDI (SWALL:Q51697) (152 aa) fasta scores: E(): 5e-32, 58.62% id in 145 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1881 SWALL:Q9I2L6 (EMBL:AE004614) (153 aa) fasta scores: E(): 1e-50, 84.96% id in 153 aa; oxidoreductase subunit alpha complement(920987..921448) Burkholderia pseudomallei K96243 3095200 YP_110694.1 CDS BPSS0681 NC_006351.1 921649 922632 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2047 SWALL:Q9I268 (EMBL:AE004631) (329 aa) fasta scores: E(): 1.8e-49, 47.72% id in 329 aa, and weakly similar to Pseudomonas aeruginosa regulatory protein AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 7.7e-06, 24.25% id in 301 aa; AraC family transcriptional regulator 921649..922632 Burkholderia pseudomallei K96243 3095215 YP_110695.1 CDS BPSS0682 NC_006351.1 922851 923249 D Similar to Vibrio vulnificus conserved hypothetical protein vv12197 SWALL:AAO10581 (EMBL:AE016804) (129 aa) fasta scores: E(): 5.3e-16, 46.15% id in 117 aa, and to Streptomyces coelicolor hypothetical protein SCO4364 or SCD19.19 SWALL:Q9F2Y3 (EMBL:AL939119) (125 aa) fasta scores: E(): 1.5e-09, 38.33% id in 120 aa. Possible alternative translational start sites; hypothetical protein 922851..923249 Burkholderia pseudomallei K96243 3095216 YP_110696.1 CDS BPSS0683 NC_006351.1 923681 924037 R hypothetical protein complement(923681..924037) Burkholderia pseudomallei K96243 3095466 YP_110697.1 CDS BPSS0684 NC_006351.1 924442 925680 D Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme C SoxC or DszC SWALL:SOXC_RHOSO (SWALL:P54998) (417 aa) fasta scores: E(): 1.3e-15, 36.09% id in 399 aa, and to Pseudomonas aeruginosa hypothetical protein pa2325 SWALL:Q9I1F3 (EMBL:AE004658) (411 aa) fasta scores: E(): 7.3e-93, 59.46% id in 412 aa. Similar to BPSS0685, 55.721% identity (56.566% ungapped) in 402 aa overlap; hypothetical protein 924442..925680 Burkholderia pseudomallei K96243 3095807 YP_110698.1 CDS BPSS0685 NC_006351.1 925685 926899 D Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme C SoxcC or DszC SWALL:SOXC_RHOSO (SWALL:P54998) (417 aa) fasta scores: E(): 7.9e-13, 30.65% id in 411 aa, and to Pseudomonas aeruginosa hypothetical protein pa2347 SWALL:Q9I1D1 (EMBL:AE004661) (405 aa) fasta scores: E(): 6e-88, 60.3% id in 393 aa. Similar to BPSS0684, 55.721% identity (56.566% ungapped) in 402 aa overlap; hypothetical protein 925685..926899 Burkholderia pseudomallei K96243 3095808 YP_110699.1 CDS BPSS0686 NC_006351.1 926987 928390 D Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme A SoxA or DszA SWALL:SOXA_RHOSO (SWALL:P54995) (453 aa) fasta scores: E(): 2e-52, 38.03% id in 447 aa, and to Pseudomonas aeruginosa hypothetical protein pa2326 SWALL:Q9I1F2 (EMBL:AE004658) (469 aa) fasta scores: E(): 2.3e-134, 71.23% id in 452 aa. Similar to BPSS0314, 57.802% identity (58.444% ungapped) in 455 aa overlap; hypothetical protein 926987..928390 Burkholderia pseudomallei K96243 3095474 YP_110700.1 CDS BPSS0686a NC_006351.1 928387 928590 D hypothetical protein 928387..928590 Burkholderia pseudomallei K96243 3095366 YP_110701.1 CDS BPSS0687 NC_006351.1 928660 929988 R Similar to Escherichia coli sensor protein RstB or UspT SWALL:RSTB_ECOLI (SWALL:P18392) (433 aa) fasta scores: E(): 3.3e-37, 33.63% id in 437 aa, and to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc3063 or rs00507 SWALL:Q8XUX0 (EMBL:AL646073) (433 aa) fasta scores: E(): 1.9e-84, 55.88% id in 433 aa; sensor kinase complement(928660..929988) Burkholderia pseudomallei K96243 3095367 YP_110702.1 CDS BPSS0688 NC_006351.1 929989 930711 R Similar to Escherichia coli transcriptional regulatory protein RstA or UrpT SWALL:RSTA_ECOLI (SWALL:P52108) (242 aa) fasta scores: E(): 1.3e-32, 42.61% id in 237 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3064 or rs00508 SWALL:Q8XUW9 (EMBL:AL646073) (243 aa) fasta scores: E(): 5.1e-78, 83.12% id in 243 aa; response regulator protein complement(929989..930711) Burkholderia pseudomallei K96243 3095461 YP_110703.1 CDS BPSS0689 NC_006351.1 930919 931698 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc3065 or rs06074 SWALL:Q8XUW8 (EMBL:AL646073) (261 aa) fasta scores: E(): 3.4e-40, 43.77% id in 249 aa. Weakly similar to Escherichia coli, and Shigella flexneri MltA-interacting protein precursor MipA SWALL:MIPA_ECOLI (SWALL:P77486) (248 aa) fasta scores: E(): 0.073, 23.67% id in 245 aa; hypothetical protein 930919..931698 Burkholderia pseudomallei K96243 3095483 YP_110704.1 CDS BPSS0690 NC_006351.1 931722 932909 D Similar to Ralstonia solanacearum signal peptide protein rsc1462 or rs03845 SWALL:Q8XZD9 (EMBL:AL646064) (367 aa) fasta scores: E(): 3.8e-41, 37.97% id in 366 aa, and to Yersinia pestis hypothetical protein ypo1559 or y2608 SWALL:Q8ZFW6 (EMBL:AJ414149) (379 aa) fasta scores: E(): 1.3e-32, 34.97% id in 366 aa. Possible alternative translational start site; hypothetical protein 931722..932909 Burkholderia pseudomallei K96243 3095484 YP_110705.1 CDS BPSS0691 NC_006351.1 932953 933390 R Similar to Escherichia coli, and Shigella flexneri homoprotocatechuate degradative operon repressor HpcR or HpaR SWALL:HPCR_ECOLI (SWALL:Q07095) (148 aa) fasta scores: E(): 6.2e-20, 46.04% id in 139 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1592 or rs03954 SWALL:Q8XZ14 (EMBL:AL646065) (154 aa) fasta scores: E(): 5.6e-21, 47.18% id in 142 aa; MarR family transcriptional regulator complement(932953..933390) Burkholderia pseudomallei K96243 3096645 YP_110706.1 CDS BPSS0692 NC_006351.1 933556 934245 D Similar to Pseudomonas aeruginosa hypothetical protein pa4121 SWALL:Q9HWR0 (EMBL:AE004828) (219 aa) fasta scores: E(): 6.1e-30, 42.92% id in 212 aa, and to the N-terminal region of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase] HpaG SWALL:HPAG_ECOLI (SWALL:Q46978) (429 aa) fasta scores: E(): 1.6e-21, 33.97% id in 209 aa; fumarylacetoacetate (FAA) hydrolase 933556..934245 Burkholderia pseudomallei K96243 3095248 YP_110707.1 CDS BPSS0693 NC_006351.1 934242 935006 D Similar to Pseudomonas aeruginosa hypothetical protein pa4122 SWALL:Q9HWQ9 (EMBL:AE004828) (259 aa) fasta scores: E(): 4.6e-59, 59.68% id in 253 aa, and to the C-terminal region of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase] HpaG SWALL:HPAG_ECOLI (SWALL:Q46978) (429 aa) fasta scores: E(): 4.9e-47, 58.29% id in 223 aa; fumarylacetoacetate (FAA) hydrolase 934242..935006 Burkholderia pseudomallei K96243 3095249 YP_110708.1 CDS hpcC NC_006351.1 935031 936494 D Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase HpcC SWALL:HPCC_ECOLI (SWALL:P42269) (468 aa) fasta scores: E(): 2.7e-138, 75.05% id in 461 aa, and to Pseudomonas aeruginosa 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase pa4123 SWALL:Q9HWQ8 (EMBL:AE004828) (486 aa) fasta scores: E(): 3.2e-161, 81.85% id in 485 aa; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 935031..936494 Burkholderia pseudomallei K96243 3094885 YP_110709.1 CDS hpcB NC_006351.1 936566 937414 D Similar to Escherichia coli 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpcB SWALL:HPCB_ECOLI (SWALL:Q05353) (275 aa) fasta scores: E(): 7e-71, 64.09% id in 259 aa, and to Salmonella typhi 3,4-dihydroxyphenylacetate 2,3-dioxygenase sty1137 SWALL:Q8Z7Q1 (EMBL:AL627269) (283 aa) fasta scores: E(): 6.1e-81, 66.31% id in 282 aa; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 936566..937414 Burkholderia pseudomallei K96243 3094970 YP_110710.1 CDS hpcD NC_006351.1 937472 937864 D Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate delta-isomerase HpcD SWALL:HPCD_ECOLI (SWALL:Q05354) (125 aa) fasta scores: E(): 2e-18, 48.41% id in 126 aa, and to Ralstonia solanacearum 5-carboxymethyl-2-hydroxymuconate delta-isomerase rsc2419 or rs02694 SWALL:Q8XWQ4 (EMBL:AL646070) (134 aa) fasta scores: E(): 2.6e-24, 50.79% id in 126 aa; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 937472..937864 Burkholderia pseudomallei K96243 3094886 YP_110711.1 CDS hpcG NC_006351.1 937887 938690 D Similar to Escherichia coli 2-oxo-hepta-3-ene-1,7-dioic acid hydratase HpcG SWALL:HPCG_ECOLI (SWALL:P42270) (264 aa) fasta scores: E(): 3.3e-74, 70.3% id in 266 aa, and to Salmonella typhimurium, and Salmonella typhi 4-hydroxyphenylacetate catabolism stm1105 or sty1139 SWALL:Q8XGD0 (EMBL:AE008748) (267 aa) fasta scores: E(): 1.4e-80, 74.06% id in 266 aa; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 937887..938690 Burkholderia pseudomallei K96243 3094887 YP_110712.1 CDS hpcH NC_006351.1 938700 939506 D Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 9.1e-58, 67.3% id in 260 aa, and to Ralstonia solanacearum 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase oxidoreductase rsc1591 or rs03953 SWALL:Q8XZ15 (EMBL:AL646065) (272 aa) fasta scores: E(): 4.4e-61, 69.61% id in 260 aa; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 938700..939506 Burkholderia pseudomallei K96243 3094884 YP_110713.1 CDS BPSS0699 NC_006351.1 939500 940342 R Similar to Xanthomonas axonopodis transcriptional regulator xac1442 SWALL:AAM36313 (EMBL:AE011776) (271 aa) fasta scores: E(): 2e-34, 42.08% id in 259 aa, and to Xanthomonas campestris transcriptional regulator xcc1396 SWALL:AAM40694 (EMBL:AE012239) (287 aa) fasta scores: E(): 9.1e-34, 40.97% id in 266 aa; AraC family transcriptional regulator complement(939500..940342) Burkholderia pseudomallei K96243 3095824 YP_110714.1 CDS BPSS0700 NC_006351.1 940619 941584 D Similar to Dictyostelium discoideum hypothetical protein SWALL:Q8T1W9 (EMBL:AC116032) (321 aa) fasta scores: E(): 5.4e-30, 35.82% id in 321 aa, and to Streptomyces coelicolor oxidoreductase SCO1199 or SCG11A.30c SWALL:Q9RJX1 (EMBL:AL939108) (326 aa) fasta scores: E(): 6.6e-15, 33.86% id in 313 aa; zinc-binding dehydrogenase 940619..941584 Burkholderia pseudomallei K96243 3095287 YP_110715.1 CDS BPSS0701 NC_006351.1 941677 942768 R Similar to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 1.7e-21, 32.97% id in 373 aa, and to Ralstonia solanacearum transmembrane outer membrane porin signal peptide protein rsc1737 or rs02925 SWALL:Q8XYM1 (EMBL:AL646066) (353 aa) fasta scores: E(): 8e-92, 67.42% id in 350 aa; outer membrane porin protein complement(941677..942768) Burkholderia pseudomallei K96243 3095288 YP_110716.1 CDS BPSS0702 NC_006351.1 943253 944320 R Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2939 or rs00150 SWALL:Q8XV92 (EMBL:AL646072) (358 aa) fasta scores: E(): 9.6e-77, 63.86% id in 357 aa, and to Yersinia pestis probable ABC-transporter ATP-binding protein ypo3048 SWALL:Q8ZCE3 (EMBL:AJ414155) (356 aa) fasta scores: E(): 1.7e-75, 62.64% id in 356 aa; ATP-binding ABC transporter protein complement(943253..944320) Burkholderia pseudomallei K96243 3097207 YP_110717.1 CDS BPSS0703 NC_006351.1 944313 946082 R Similar to Ralstonia solanacearum transmembrane ABC transporter protein rsc2938 or rs00151 SWALL:Q8XV93 (EMBL:AL646072) (603 aa) fasta scores: E(): 7.4e-105, 63.13% id in 594 aa. Weakly similar to the C-terminal region of Actinobacillus pleuropneumoniae ferric transport system permease AfuB SWALL:AFUB_ACTPL (SWALL:Q44123) (687 aa) fasta scores: E(): 1.6e-22, 24.28% id in 556 aa; transmembrane ABC transporter protein complement(944313..946082) Burkholderia pseudomallei K96243 3095475 YP_110718.1 CDS BPSS0704 NC_006351.1 946182 947270 R Similar to Ralstonia solanacearum periplasmic iron-binding signal peptide protein rsc2937 or rs00344 SWALL:Q8XV94 (EMBL:AL646072) (365 aa) fasta scores: E(): 1.3e-76, 57.1% id in 366 aa, and to Yersinia pestis exported protein ypo3050 SWALL:Q8ZCE1 (EMBL:AJ414155) (362 aa) fasta scores: E(): 2.3e-69, 54.41% id in 340 aa; periplasmic solute-binding protein complement(946182..947270) Burkholderia pseudomallei K96243 3095476 YP_110719.1 CDS BPSS0705 NC_006351.1 947399 948070 D Similar to Escherichia coli transcriptional regulatory protein QseB SWALL:QSEB_ECOLI (SWALL:P52076) (219 aa) fasta scores: E(): 4.3e-28, 42.2% id in 218 aa, and to Ralstonia solanacearum probable two-component response regulator transcription regulator protein rsc1736 or rs02924 SWALL:Q8XYM2 (EMBL:AL646066) (230 aa) fasta scores: E(): 4.2e-59, 72.97% id in 222 aa. Similar to BPSL0775, 55.263% identity (55.507% ungapped) in 228 aa overlap; response regulator protein 947399..948070 Burkholderia pseudomallei K96243 3095674 YP_110720.1 CDS BPSS0706 NC_006351.1 948067 949566 D Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 1.5e-29, 33.11% id in 468 aa, and to Ralstonia solanacearum probable two-component transmembrane sensor kinase transcription regulator protein rsc1735 or rs02923 SWALL:Q8XYM3 (EMBL:AL646066) (471 aa) fasta scores: E(): 2.4e-87, 59.64% id in 456 aa. CDS is extended at the C-terminus in comparison to orthologues; sensor kinase 948067..949566 Burkholderia pseudomallei K96243 3095880 YP_110721.1 CDS BPSS0707 NC_006351.1 950344 951213 R Similar to Agrobacterium tumefaciens hypothetical protein atu1042 or AGR_C_1923 SWALL:Q8UGJ5 (EMBL:AE009068) (285 aa) fasta scores: E(): 1e-22, 35.61% id in 278 aa, and to Pseudomonas aeruginosa hypothetical protein pa3022 SWALL:Q9HZI4 (EMBL:AE004727) (268 aa) fasta scores: E(): 1.7e-20, 40.07% id in 282 aa; hypothetical protein complement(950344..951213) Burkholderia pseudomallei K96243 3095881 YP_110722.1 CDS BPSS0708 NC_006351.1 953131 954333 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 9.1e-19, 30% id in 380 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 2.9e-36, 37.28% id in 413 aa; porin protein 953131..954333 Burkholderia pseudomallei K96243 3095521 YP_110723.1 CDS BPSS0709 NC_006351.1 954456 955919 D Similar to Thermoanaerobacter tengcongensis transposase tte0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 4.4e-74, 43.54% id in 457 aa, and to Pseudomonas sp. transposase tnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 1.7e-32, 30.94% id in 475 aa; transposase 954456..955919 Burkholderia pseudomallei K96243 3096463 YP_110724.1 CDS BPSS0710 NC_006351.1 957425 958210 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 957425..958210 Burkholderia pseudomallei K96243 3096464 YP_110725.1 CDS alr NC_006351.1 958508 959632 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(958508..959632) Burkholderia pseudomallei K96243 3096582 YP_110726.1 CDS BPSS0712 NC_006351.1 960161 960541 D Similar to Rhizobium meliloti hypothetical protein rb0957 or smb21379 SWALL:Q92UX8 (EMBL:AL603645) (124 aa) fasta scores: E(): 6.7e-31, 68.33% id in 120 aa, and to Mycobacterium tuberculosis hypothetical protein rv0140 or mt0148 SWALL:P96817 (EMBL:Z92770) (126 aa) fasta scores: E(): 4.7e-18, 50.4% id in 125 aa; hypothetical protein 960161..960541 Burkholderia pseudomallei K96243 3096081 YP_110727.1 CDS BPSS0713 NC_006351.1 960706 961941 D Similar to Ralstonia solanacearum hypothetical protein rsc1789 or rs04188 SWALL:Q8XYG9 (EMBL:AL646066) (434 aa) fasta scores: E(): 1.2e-65, 56.35% id in 417 aa, and to Xanthomonas campestris hypothetical protein xcc0167 SWALL:AAM39486 (EMBL:AE012112) (427 aa) fasta scores: E(): 9e-57, 52.26% id in 419 aa; hypothetical protein 960706..961941 Burkholderia pseudomallei K96243 3095416 YP_110728.1 CDS BPSS0714 NC_006351.1 961946 962920 D Similar to Synechocystis sp. hypothetical protein slr0865 SWALL:P73759 (EMBL:D90909) (337 aa) fasta scores: E(): 2.7e-41, 43.83% id in 308 aa, and to Mycobacterium tuberculosis hypothetical protein rv3701c or mt3804 SWALL:O69669 (EMBL:AL022121) (321 aa) fasta scores: E(): 8.3e-40, 42.4% id in 316 aa; hypothetical protein 961946..962920 Burkholderia pseudomallei K96243 3095417 YP_110729.1 CDS BPSS0715 NC_006351.1 963139 963672 R hypothetical protein complement(963139..963672) Burkholderia pseudomallei K96243 3096038 YP_110730.1 CDS BPSS0716 NC_006351.1 963917 964753 R Weakly similar to Bacillus stearothermophilus carboxylesterase precursor Est SWALL:EST_BACST (SWALL:Q06174) (247 aa) fasta scores: E(): 0.00011, 23.9% id in 251 aa, and to Thermotoga maritima esterase tm1022 SWALL:O50547 (EMBL:AJ001694) (253 aa) fasta scores: E(): 5.5e-07, 26% id in 250 aa; hypothetical protein complement(963917..964753) Burkholderia pseudomallei K96243 3095280 YP_110731.1 CDS BPSS0717 NC_006351.1 964746 966038 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0982 or rs04310 SWALL:Q8Y0R1 (EMBL:AL646062) (429 aa) fasta scores: E(): 1.4e-83, 53.42% id in 423 aa, and to Rhizobium meliloti two-component sensor histidine kinase rb1162 or smb20868 SWALL:Q92UG9 (EMBL:AL603646) (1229 aa) fasta scores: E(): 1e-09, 26.43% id in 435 aa; hypothetical protein complement(964746..966038) Burkholderia pseudomallei K96243 3095281 YP_110732.1 CDS BPSS0718 NC_006351.1 967024 967668 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2196 SWALL:Q9I1S1 (EMBL:AE004646) (194 aa) fasta scores: E(): 1.6e-32, 51.59% id in 188 aa, and to Yersinia pestis TetR-family transcriptional regulatory protein ypo2378 SWALL:Q8ZE12 (EMBL:AJ414152) (199 aa) fasta scores: E(): 8.7e-28, 45.26% id in 190 aa; TetR family transcriptional regulator 967024..967668 Burkholderia pseudomallei K96243 3096272 YP_110733.1 CDS BPSS0719 NC_006351.1 968213 968893 D Similar to Streptomyces griseus subsp. griseus NonF protein SWALL:Q9XDF2 (EMBL:AF074603) (234 aa) fasta scores: E(): 4.9e-28, 42.98% id in 228 aa, and to Xanthomonas campestris NonF-related protein xcc3360 SWALL:AAM42630 (EMBL:AE012455) (226 aa) fasta scores: E(): 4.1e-56, 65.47% id in 223 aa; peptidase 968213..968893 Burkholderia pseudomallei K96243 3095395 YP_110734.1 CDS BPSS0720 NC_006351.1 969183 970280 D Similar to Pseudomonas putida xenobiotic reductase A XenA SWALL:Q9R9V9 (EMBL:AF154061) (363 aa) fasta scores: E(): 1.9e-111, 76.3% id in 363 aa, and to Xanthomonas campestris xenobiotic flavin oxidoreductase a xcc1170 SWALL:AAM40468 (EMBL:AE012216) (366 aa) fasta scores: E(): 3.5e-106, 73.75% id in 362 aa; NADH:flavin oxidoreductase / NADH oxidase 969183..970280 Burkholderia pseudomallei K96243 3095396 YP_110735.1 CDS BPSS0721 NC_006351.1 971275 972036 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 971275..972036 Burkholderia pseudomallei K96243 3096283 YP_110736.1 CDS BPSS0723 NC_006351.1 972923 973993 D Similar to Rhizobium meliloti hypothetical protein ra0234 or sma0447 SWALL:Q930G3 (EMBL:AE007216) (373 aa) fasta scores: E(): 1.4e-28, 34.64% id in 355 aa. Weakly similar to Rhizobium loti hypothetical protein mlr8361 SWALL:Q983E6 (EMBL:AP003013) (411 aa) fasta scores: E(): 5.8e-29, 29.72% id in 360 aa; hypothetical protein 972923..973993 Burkholderia pseudomallei K96243 3095454 YP_110737.1 CDS BPSS0724 NC_006351.1 974124 974519 D Weakly similar to Pseudomonas aeruginosa osmotically inducible lipoprotein OsmE SWALL:Q9HUT7 (EMBL:AE004901) (114 aa) fasta scores: E(): 0.0005, 28.57% id in 105 aa; hypothetical protein 974124..974519 Burkholderia pseudomallei K96243 3096482 YP_110738.1 CDS BPSS0725 NC_006351.1 974797 975591 R Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1344 SWALL:Q9I400 (EMBL:AE004564) (264 aa) fasta scores: E(): 1.4e-60, 66.28% id in 264 aa, and to Ralstonia solanacearum probable oxidoreductase rsc3138 or rs00465 SWALL:Q8XUP8 (EMBL:AL646073) (262 aa) fasta scores: E(): 9.4e-50, 58.17% id in 263 aa; short-chain dehydrogenase complement(974797..975591) Burkholderia pseudomallei K96243 3095421 YP_110739.1 CDS BPSS0726 NC_006351.1 975934 977442 R Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 8.8e-57, 39.91% id in 491 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc3119 or rs00574 SWALL:Q8XUR6 (EMBL:AL646073) (488 aa) fasta scores: E(): 1.6e-129, 71.83% id in 490 aa; GntR family transcriptional regulator complement(975934..977442) Burkholderia pseudomallei K96243 3095422 YP_110740.1 CDS BPSS0727 NC_006351.1 977546 978265 D Similar to Ralstonia solanacearum hypothetical protein rsc3120 or rs00575 SWALL:Q8XUR5 (EMBL:AL646073) (227 aa) fasta scores: E(): 2.8e-66, 77.23% id in 224 aa, and to Streptomyces coelicolor hypothetical protein SCO1361 or SC10A9.03 SWALL:Q9AKA1 (EMBL:AL939108) (228 aa) fasta scores: E(): 2.7e-37, 48.67% id in 226 aa; hypothetical protein 977546..978265 Burkholderia pseudomallei K96243 3096524 YP_110741.1 CDS BPSS0730 NC_006351.1 979524 980234 R C-terminal region is similar to Pseudomonas aeruginosa cyclic AMP receptor-like protein Vfr SWALL:VFR_PSEAE (SWALL:P55222) (214 aa) fasta scores: E(): 3.6e-05, 26.53% id in 196 aa. Full length CDS is similar to Ralstonia solanacearum transcription regulator protein rsp0805 or rs01902 SWALL:Q8XRM6 (EMBL:AL646081) (239 aa) fasta scores: E(): 3.4e-15, 31.19% id in 234 aa; regulatory protein complement(979524..980234) Burkholderia pseudomallei K96243 3095440 YP_110742.1 CDS BPSS0731 NC_006351.1 980533 982194 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 980533..982194 Burkholderia pseudomallei K96243 3095220 YP_110743.1 CDS BPSS0732 NC_006351.1 982533 983231 D Poor database matches. C-terminal region is weakly similar to Pseudomonas aeruginosa hypothetical protein pa0981 SWALL:Q9I4Y8 (EMBL:AE004531) (207 aa) fasta scores: E(): 7.3e-12, 32.63% id in 190 aa; hypothetical protein 982533..983231 Burkholderia pseudomallei K96243 3095187 YP_110744.1 CDS BPSS0733 NC_006351.1 983344 985440 R C-terminus is similar to the C-terminal region of Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 3.5e-40, 55.23% id in 277 aa. Full length CDS is similar to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc3136 or rs00467 SWALL:Q8XUQ0 (EMBL:AL646073) (661 aa) fasta scores: E(): 7.2e-44, 46.76% id in 680 aa; methyl-accepting chemotaxis protein complement(983344..985440) Burkholderia pseudomallei K96243 3095188 YP_110745.1 CDS oprM NC_006351.1 985782 987641 R Similar to Pseudomonas aeruginosa outer membrane protein OprM or OprK SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 5.5e-60, 50.92% id in 487 aa, and to Xanthomonas campestris outer membrane protein xcc2681 SWALL:AAM41953 (EMBL:AE012380) (497 aa) fasta scores: E(): 7e-62, 51.91% id in 495 aa. CDS is extended at the C-terminus in comparison to orthologues. Probable gene fusion resulting from the loss of a stop codon. The effect on the function of CDS is not known; outer membrane efflux protein complement(985782..987641) Burkholderia pseudomallei K96243 3097257 YP_110746.1 CDS BPSS0735 NC_006351.1 987699 989666 R Similar to an internal region of Acetobacter xylinus cellulose synthase 1 [includes: cellulose synthase catalytic domain [UDP-forming]; cyclic di-GMP binding domain (cellulose synthase 1 regulatory domain)] AcsA or AcsB SWALL:ACS1_ACEXY (SWALL:P21877) (1550 aa) fasta scores: E(): 2.4e-44, 31.8% id in 632 aa. Full length CDS is similar to Agrobacterium tumefaciens beta 1,3 glucan synthase catalytic subunit ATU3056 or AGR_L_3500 SWALL:Q8UBG0 (EMBL:AE009236) (654 aa) fasta scores: E(): 3.7e-107, 44.34% id in 654 aa; glycosyl transferase complement(987699..989666) Burkholderia pseudomallei K96243 3096068 YP_110747.1 CDS BPSS0736 NC_006351.1 989669 990994 R Similar to Agrobacterium tumefaciens hypothetical protein ATU3055 or AGR_L_3502 SWALL:Q8UBG1 (EMBL:AE009236) (437 aa) fasta scores: E(): 2.3e-66, 45.56% id in 406 aa; hypothetical protein complement(989669..990994) Burkholderia pseudomallei K96243 3095472 YP_110748.1 CDS BPSS0737 NC_006351.1 991009 992559 R C-terminus is weakly similar to the C-terminal region of Agrobacterium tumefaciens hypothetical protein ATU3057 or AGR_L_3498 SWALL:Q8UBF9 (EMBL:AE009236) (526 aa) fasta scores: E(): 1.2e-13, 25.35% id in 489 aa. Internal region is similar to Rhizobium meliloti hypothetical protein rb0376 or smb20390 SWALL:Q92WG3 (EMBL:AL603643) (410 aa) fasta scores: E(): 6.6e-10, 24.81% id in 403 aa; hypothetical protein complement(991009..992559) Burkholderia pseudomallei K96243 3095473 YP_110749.1 CDS BPSS0738 NC_006351.1 993595 993924 D DNA-binding protein 993595..993924 Burkholderia pseudomallei K96243 3097226 YP_110750.1 CDS BPSS0738A NC_006351.1 994109 994471 R Weakly similar to Chromobacterium violaceum hypothetical protein SWALL:Q7NTA3 (EMBL:AE016921) (135 aa) fasta scores: E(): 0.08, 36.44% id in 118 aa; hypothetical protein complement(994109..994471) Burkholderia pseudomallei K96243 3097072 YP_110751.1 CDS BPSS0739 NC_006351.1 994808 995302 R Similar to the C-terminal region of Alcaligenes sp 2,4'-dihydroxyacetophenone dioxygenase (fragment) Dad SWALL:Q9REI7 (EMBL:AJ133820) (176 aa) fasta scores: E(): 5.3e-08, 32.23% id in 152 aa; hypothetical protein complement(994808..995302) Burkholderia pseudomallei K96243 3097073 YP_110752.1 CDS BPSS0740 NC_006351.1 995453 996238 R hypothetical protein complement(995453..996238) Burkholderia pseudomallei K96243 3095143 YP_110753.1 CDS BPSS0741 NC_006351.1 997157 998107 R Similar to Pseudomonas sp. SDS degradation transcriptional activation protein SdsB SWALL:SDSB_PSES9 (SWALL:P52686) (306 aa) fasta scores: E(): 7e-09, 27.11% id in 295 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0133 SWALL:Q9I6Z9 (EMBL:AE004451) (305 aa) fasta scores: E(): 4.4e-44, 39.6% id in 303 aa; LysR family transcriptional regulator complement(997157..998107) Burkholderia pseudomallei K96243 3095124 YP_110754.1 CDS BPSS0742 NC_006351.1 998211 999566 D catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 998211..999566 Burkholderia pseudomallei K96243 3095125 YP_110755.1 CDS BPSS0743 NC_006351.1 999777 1001294 D Similar to Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] MmsA SWALL:MMSA_PSEAE (SWALL:P28810) (496 aa) fasta scores: E(): 2.9e-89, 47.56% id in 492 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa0130 SWALL:Q9I702 (EMBL:AE004451) (497 aa) fasta scores: E(): 3.6e-129, 66.53% id in 493 aa. Similar to BPSL3420, 57.730% identity (58.300% ungapped) in 511 aa overlap; methylmalonate-semialdehyde dehydrogenase 999777..1001294 Burkholderia pseudomallei K96243 3096016 YP_110756.1 CDS BPSS0745 NC_006351.1 1001970 1002458 R hypothetical protein complement(1001970..1002458) Burkholderia pseudomallei K96243 3097147 YP_110757.1 CDS BPSS0746 NC_006351.1 1003007 1004239 R Weakly similar to Streptomyces coelicolor secreted protein SCO7396 or SC10G8.24c SWALL:Q9L181 (EMBL:AL939131) (445 aa) fasta scores: E(): 9.8e-08, 27.56% id in 439 aa; lipase complement(1003007..1004239) Burkholderia pseudomallei K96243 3097116 YP_110758.1 CDS BPSS0747 NC_006351.1 1004758 1005855 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.6e-13, 32.18% id in 407 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 5.5e-40, 42.22% id in 386 aa; outer membrane porin protein 1004758..1005855 Burkholderia pseudomallei K96243 3095213 YP_110759.1 CDS BPSS0748 NC_006351.1 1006475 1006846 R Similar to Pseudomonas syringae pv. maculicola hypothetical protein SWALL:Q93TD7 (EMBL:AF359557) (126 aa) fasta scores: E(): 5e-20, 51.69% id in 118 aa, and to Agrobacterium tumefaciens hypothetical protein ATU1486 or AGR_C_2741 SWALL:Q8UFB2 (EMBL:AE009107) (129 aa) fasta scores: E(): 1.8e-15, 44.27% id in 131 aa; hypothetical protein complement(1006475..1006846) Burkholderia pseudomallei K96243 3095214 YP_110760.1 CDS BPSS0749 NC_006351.1 1007013 1007813 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1484 SWALL:Q9I3M8 (EMBL:AE004577) (268 aa) fasta scores: E(): 2.9e-54, 56.01% id in 266 aa. C-terminal region is similar to Aeromonas salmonicida hypothetical transcriptional regulator SWALL:YEXN_AERSA (SWALL:P45785) (193 aa) fasta scores: E(): 2e-11, 35.86% id in 184 aa; GerE familyregulatory protein complement(1007013..1007813) Burkholderia pseudomallei K96243 3096315 YP_110761.1 CDS BPSS0750 NC_006351.1 1007935 1009344 D Similar to Pseudomonas aeruginosa probable amino acid permease pa1485 SWALL:Q9I3M7 (EMBL:AE004577) (455 aa) fasta scores: E(): 2.7e-90, 56.76% id in 451 aa. N-terminus is similar to the N-terminal region of Homo sapiens large neutral amino acids transporter small subunit 1 SLC7A5 or LAT1 or MPE16 SWALL:LAT1_HUMAN (SWALL:Q01650) (507 aa) fasta scores: E(): 4.5e-13, 25.57% id in 391 aa; amino acid permease 1007935..1009344 Burkholderia pseudomallei K96243 3095118 YP_110762.1 CDS BPSS0751 NC_006351.1 1009386 1010516 D Similar to Pseudomonas aeruginosa hypothetical protein pa1486 SWALL:Q9I3M6 (EMBL:AE004577) (366 aa) fasta scores: E(): 1.3e-85, 67.47% id in 372 aa, and to Agrobacterium tumefaciens aminopeptidase ATU5242 or AGR_PAT_343 SWALL:Q8UK81 (EMBL:AE008947) (384 aa) fasta scores: E(): 1.2e-42, 44.79% id in 384 aa; peptidase 1009386..1010516 Burkholderia pseudomallei K96243 3095119 YP_110763.1 CDS BPSS0752 NC_006351.1 1010507 1012153 R Poor database matches. N-terminal region is weakly similar to Streptomyces coelicolor lipoprotein SCO6050 or SC1b5.10c SWALL:O69838 (EMBL:AL939126) (289 aa) fasta scores: E(): 3.9, 26.03% id in 315 aa; lipoprotein complement(1010507..1012153) Burkholderia pseudomallei K96243 3095201 YP_110764.1 CDS BPSS0753 NC_006351.1 1012328 1012648 R No significant database matches. Doubtful CDS; hypothetical protein complement(1012328..1012648) Burkholderia pseudomallei K96243 3095293 YP_110765.1 CDS BPSS0754 NC_006351.1 1012673 1014904 R Similar to Pseudomonas aeruginosa hypothetical protein pa3893 SWALL:Q9HXC0 (EMBL:AE004806) (731 aa) fasta scores: E(): 1.2e-94, 41.24% id in 708 aa. C-terminal region is similar to Burkholderia cepacia fusaric acid resistance protein FusD SWALL:FUSD_BURCE (SWALL:P24129) (208 aa) fasta scores: E(): 2e-22, 43.5% id in 200 aa; hypothetical protein complement(1012673..1014904) Burkholderia pseudomallei K96243 3095294 YP_110766.1 CDS BPSS0755 NC_006351.1 1015115 1016125 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3895 SWALL:Q9HXB8 (EMBL:AE004807) (317 aa) fasta scores: E(): 1.2e-68, 57.84% id in 306 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0876 SWALL:Q9I569 (EMBL:AE004522) (314 aa) fasta scores: E(): 1.8e-59, 51.79% id in 307 aa. Similar to BPSL1971, 57.843% identity (58.033% ungapped) in 306 aa overlap; LysR family transcriptional regulator 1015115..1016125 Burkholderia pseudomallei K96243 3096111 YP_110767.1 CDS BPSS0756 NC_006351.1 1016647 1016949 R hypothetical protein complement(1016647..1016949) Burkholderia pseudomallei K96243 3097006 YP_110768.1 CDS BPSS0757 NC_006351.1 1017268 1018422 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.2e-17, 32.2% id in 413 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 3.1e-51, 47.38% id in 401 aa. Similar to BPSL2559, 54.271% identity (59.178% ungapped) in 398 aa overlap, and to BPSS0943, 50.382% identity (55.000% ungapped) in 393 aa overlap; porin protein 1017268..1018422 Burkholderia pseudomallei K96243 3097007 YP_110769.1 CDS BPSS0758 NC_006351.1 1018536 1019000 D Similar to Rhizobium loti hypothetical protein mlr5539 SWALL:Q98BJ9 (EMBL:AP003006) (156 aa) fasta scores: E(): 6.2e-35, 61.22% id in 147 aa, and to Caulobacter crescentus hypothetical protein cc1279 SWALL:Q9A8S2 (EMBL:AE005803) (151 aa) fasta scores: E(): 4.6e-25, 52.48% id in 141 aa; hypothetical protein 1018536..1019000 Burkholderia pseudomallei K96243 3097066 YP_110770.1 CDS codB NC_006351.1 1019550 1020812 D Similar to Escherichia coli cytosine permease CodB SWALL:CODB_ECOLI (SWALL:P25525) (419 aa) fasta scores: E(): 5.7e-44, 32.85% id in 414 aa, and to Pseudomonas aeruginosa cytosine permease pa0438 SWALL:Q9I679 (EMBL:AE004481) (416 aa) fasta scores: E(): 2.8e-44, 33.01% id in 415 aa; cytosine permease 1019550..1020812 Burkholderia pseudomallei K96243 3095400 YP_110771.1 CDS BPSS0760 NC_006351.1 1020817 1022049 D Similar to Clostridium perfringens hypothetical protein cpe0759 SWALL:Q8XMD0 (EMBL:AP003188) (399 aa) fasta scores: E(): 4.4e-10, 23.85% id in 415 aa, and to Clostridium acetobutylicum possible transcriptional regulator from leucine-rich protein cac1426 SWALL:Q97J60 (EMBL:AE007654) (397 aa) fasta scores: E(): 2.4e-08, 26.31% id in 399 aa; DNA-binding protein 1020817..1022049 Burkholderia pseudomallei K96243 3095401 YP_110772.1 CDS codA NC_006351.1 1022049 1023305 D Similar to Escherichia coli cytosine deaminase CodA SWALL:CODA_ECOLI (SWALL:P25524) (426 aa) fasta scores: E(): 8.3e-86, 56.02% id in 407 aa, and to Salmonella typhimurium cytosine deaminase stm3334 SWALL:Q8ZLR0 (EMBL:AE008853) (426 aa) fasta scores: E(): 3.6e-88, 56.71% id in 402 aa; cytosine deaminase 1022049..1023305 Burkholderia pseudomallei K96243 3096544 YP_110773.1 CDS BPSS0762 NC_006351.1 1023400 1024737 R Similar to Agrobacterium vitis tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 1.3e-55, 40.56% id in 424 aa, and to Ralstonia solanacearum probable permease transmembrane protein rsc2352 or rs01194 SWALL:Q8XWW8 (EMBL:AL646069) (442 aa) fasta scores: E(): 1.9e-59, 41.28% id in 419 aa; transporter protein complement(1023400..1024737) Burkholderia pseudomallei K96243 3095350 YP_110774.1 CDS BPSS0763 NC_006351.1 1024933 1025865 R Similar to Rhizobium loti hypothetical protein mll0106 SWALL:Q98NK0 (EMBL:AP002994) (309 aa) fasta scores: E(): 4.3e-76, 65.48% id in 310 aa, and to Archaeoglobus fulgidus hypothetical protein af1210 SWALL:O29058 (EMBL:AE001021) (313 aa) fasta scores: E(): 2.9e-58, 51.14% id in 307 aa; hypothetical protein complement(1024933..1025865) Burkholderia pseudomallei K96243 3096625 YP_110775.1 CDS BPSS0764 NC_006351.1 1025907 1026704 R Similar to Streptomyces galilaeus ketoacyl reductase AknIII SWALL:Q54190 (EMBL:D14040) (261 aa) fasta scores: E(): 6.2e-23, 37.98% id in 258 aa, and to Rhizobium loti probable short chain dehydrogenase mll1036 SWALL:Q98LG1 (EMBL:AP002996) (268 aa) fasta scores: E(): 1.8e-46, 54.51% id in 266 aa; short chain dehydrogenase complement(1025907..1026704) Burkholderia pseudomallei K96243 3096626 YP_110776.1 CDS BPSS0765 NC_006351.1 1026819 1027535 R Similar to Rhizobium loti transcriptional regulator mlr7171 SWALL:Q986X5 (EMBL:AP003011) (218 aa) fasta scores: E(): 2.7e-26, 43.6% id in 211 aa, and to Rhizobium loti transcriptional regulator mll7255 SWALL:Q986Q3 (EMBL:AP003011) (218 aa) fasta scores: E(): 5.2e-20, 39.13% id in 207 aa; DNA-binding protein complement(1026819..1027535) Burkholderia pseudomallei K96243 3095161 YP_110777.1 CDS BPSS0766 NC_006351.1 1027889 1029235 D C-terminal region is similar to Yersinia pseudotuberculosis chloride channel protein EriC-like SWALL:ERIL_YERPS (SWALL:Q9AGD5) (429 aa) fasta scores: E(): 1e-20, 29.67% id in 401 aa, and to Zymomonas mobilis chloride channel protein Clc-B SWALL:Q9RNN4 (EMBL:AF179611) (425 aa) fasta scores: E(): 9.7e-66, 49.02% id in 410 aa. Possible alternative translational start site; voltage gated chloride channel 1027889..1029235 Burkholderia pseudomallei K96243 3095328 YP_110778.1 CDS BPSS0767 NC_006351.1 1029559 1029882 R hypothetical protein complement(1029559..1029882) Burkholderia pseudomallei K96243 3095329 YP_110779.1 CDS BPSS0768 NC_006351.1 1030137 1030379 R Possible gene remnant. Similar to the C-terminal regions of Bradyrhizobium japonicum USDA 110 BLL6723 protein SWALL:Q89FH7 (EMBL:AP005959) (568 aa) fasta scores: E(): 2.1e-10, 52.27% id in 88 aa, and Francisella novicida acid phosphatase precursor acpA SWALL:Q47936 (EMBL:L39831) (514 aa) fasta scores: E(): 0.093, 38.59% id in 57 aa; hypothetical protein complement(1030137..1030379) Burkholderia pseudomallei K96243 3095221 YP_110780.1 CDS BPSS0769 NC_006351.1 1030401 1031381 R Similar to Agrobacterium tumefaciens hypothetical protein ATU1617 or AGR_C_2981 SWALL:Q8UEY6 (EMBL:AE009119) (310 aa) fasta scores: E(): 1.5e-42, 46.78% id in 327 aa, and to Caulobacter crescentus hypothetical protein CC2313 SWALL:Q9A5Y4 (EMBL:AE005901) (328 aa) fasta scores: E(): 7.1e-33, 41.01% id in 334 aa; hypothetical protein complement(1030401..1031381) Burkholderia pseudomallei K96243 3095308 YP_110781.1 CDS BPSS0769A NC_006351.1 1031753 1031920 R Doubtful CDS. Similar to the C-terminal region of Azoarcus evansii PaaB SWALL:Q9F9U8 (EMBL:AF176259) (103 aa) fasta scores: E(): 1.4, 50% id in 52 aa; hypothetical protein complement(1031753..1031920) Burkholderia pseudomallei K96243 3095309 YP_110782.1 CDS BPSS0770 NC_006351.1 1031917 1032555 R Similar to Escherichia coli, and Shigella flexneri response regulator UvrY SWALL:UVRY_ECOLI (SWALL:P07027) (218 aa) fasta scores: E(): 9.6e-15, 28.98% id in 207 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc0192 or rs00624 SWALL:Q8Y2Y9 (EMBL:AL646057) (215 aa) fasta scores: E(): 1.1e-32, 47.11% id in 208 aa. Similar to BPSS1161, 51.905% identity (51.905% ungapped) in 210 aa overlap, and to BPSS0835, 50.000% identity (50.237% ungapped) in 212 aa overlap; GerE family regulatory protein complement(1031917..1032555) Burkholderia pseudomallei K96243 3095096 YP_110783.1 CDS BPSS0771 NC_006351.1 1033745 1033966 D hypothetical protein 1033745..1033966 Burkholderia pseudomallei K96243 3094954 YP_110784.1 CDS BPSS0772 NC_006351.1 1034568 1035050 D Similar to Ralstonia solanacearum probable transcription regulator protein rsp0224 or rs05199 SWALL:Q8XT91 (EMBL:AL646077) (154 aa) fasta scores: E(): 3.9e-21, 45.75% id in 153 aa. Weakly similar to Salmonella typhimurium multiple antibiotic resistance protein MarR SWALL:MARR_SALTY (SWALL:Q56069) (144 aa) fasta scores: E(): 0.0013, 30.18% id in 106 aa; MarR family transcriptional regulator 1034568..1035050 Burkholderia pseudomallei K96243 3094955 YP_110785.1 CDS BPSS0776 NC_006351.1 1036929 1037864 D Similar to Gallus gallus regucalcin SWALL:Q9I923 (EMBL:AB037935) (299 aa) fasta scores: E(): 4.9e-18, 29.96% id in 287 aa, and to Ralstonia solanacearum hypothetical protein rsc2755 or rs00099 SWALL:Q8XVS4 (EMBL:AL646071) (303 aa) fasta scores: E(): 1.1e-44, 51.23% id in 283 aa; hypothetical protein 1036929..1037864 Burkholderia pseudomallei K96243 3096873 YP_110786.1 CDS BPSS0777 NC_006351.1 1038482 1038898 D Similar to Rhizobium meliloti hypothetical protein r01249 or smc01810 SWALL:Q92QQ8 (EMBL:AL591786) (113 aa) fasta scores: E(): 1.3e-05, 27.92% id in 111 aa, and to the C-terminal region of Agrobacterium tumefaciens hypothetical protein ATU0309 or AGR_C_536 SWALL:Q8UII6 (EMBL:AE009002) (170 aa) fasta scores: E(): 2e-17, 49.03% id in 104 aa; hypothetical protein 1038482..1038898 Burkholderia pseudomallei K96243 3096874 YP_110787.1 CDS BPSS0778 NC_006351.1 1038984 1039424 R Similar to Rhizobium loti hypothetical protein mll2249 SWALL:Q98IU1 (EMBL:AP002999) (130 aa) fasta scores: E(): 1.1e-31, 73.68% id in 114 aa, and to Ralstonia solanacearum hypothetical protein rsp1476 or rs03067 SWALL:Q8XQ10 (EMBL:AL646085) (141 aa) fasta scores: E(): 1.2e-31, 66.93% id in 124 aa; hypothetical protein complement(1038984..1039424) Burkholderia pseudomallei K96243 3097229 YP_110788.1 CDS BPSS0779 NC_006351.1 1041219 1042046 D catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; p-hydroxycinnamoyl CoA hydratase/lyase 1041219..1042046 Burkholderia pseudomallei K96243 3095197 YP_110789.1 CDS BPSS0780 NC_006351.1 1042213 1043661 D Similar to Pseudomonas sp. salicylaldehyde dehydrogenase NahF or DoxF SWALL:NAHF_PSESP (SWALL:Q52460) (483 aa) fasta scores: E(): 5.7e-79, 47.59% id in 479 aa, and to Pseudomonas fluorescens vanillin: NAD+ oxidoreductase Vdh SWALL:O69763 (EMBL:Y13067) (482 aa) fasta scores: E(): 2.8e-113, 67.14% id in 484 aa. Similar to BPSL0843, 64.694% identity (64.959% ungapped) in 490 aa overlap; aldehyde dehydrogenase 1042213..1043661 Burkholderia pseudomallei K96243 3095198 YP_110790.1 CDS BPSS0781 NC_006351.1 1043679 1045535 D catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase 1043679..1045535 Burkholderia pseudomallei K96243 3095155 YP_110791.1 CDS BPSS0782 NC_006351.1 1045840 1047045 D Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 3.4e-17, 35.75% id in 400 aa, and to Pseudomonas fluorescens hypothetical metabolite transport protein SWALL:O69757 (EMBL:L49465) (405 aa) fasta scores: E(): 1.7e-60, 48.72% id in 392 aa; 3-hydroxyphenylpropionic transporter MhpT 1045840..1047045 Burkholderia pseudomallei K96243 3095156 YP_110792.1 CDS BPSS0783 NC_006351.1 1047507 1048646 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 7.5e-13, 32.93% id in 413 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp1594 or rs02151 SWALL:Q8XPP4 (EMBL:AL646085) (374 aa) fasta scores: E(): 8.3e-78, 57.75% id in 374 aa; outer membrane porin protein 1047507..1048646 Burkholderia pseudomallei K96243 3096523 YP_110793.1 CDS BPSS0784 NC_006351.1 1048719 1050443 D Similar to Acinetobacter sp. ADP1 chlorogenate esterase HcaG SWALL:Q8RLZ8 (EMBL:L05770) (580 aa) fasta scores: E(): 1.1e-104, 51.63% id in 552 aa, and to Agrobacterium tumefaciens tannase ATU5261 or AGR_PAT_374 SWALL:Q8UK62 (EMBL:AE008948) (553 aa) fasta scores: E(): 1.3e-11, 26.96% id in 560 aa. Lower levels of similarity in the N-terminal regions; hypothetical protein 1048719..1050443 Burkholderia pseudomallei K96243 3096706 YP_110794.1 CDS BPSS0785 NC_006351.1 1050707 1051531 R Weakly similar to Erwinia chrysanthemi pectin degradation repressor protein KdgR SWALL:KDGR_ERWCH (SWALL:P37728) (305 aa) fasta scores: E(): 9.6e-08, 26.56% id in 256 aa. Similar to Rhizobium meliloti transcriptional regulator protein rb0681 or smb21102 SWALL:Q92VL9 (EMBL:AL603644) (260 aa) fasta scores: E(): 7.5e-40, 48.83% id in 258 aa. Similar to BPSS2127, 76.557% identity (76.557% ungapped) in 273 aa overlap; IclR family transcriptional regulator complement(1050707..1051531) Burkholderia pseudomallei K96243 3096707 YP_110795.1 CDS BPSS0786 NC_006351.1 1051720 1052733 D Similar to Salmonella typhimurium, and Salmonella typhi D-ribose-binding periplasmic protein precursor RbsB SWALL:RBSB_SALTY (SWALL:P02926) (296 aa) fasta scores: E(): 3e-14, 27.09% id in 299 aa, and to Rhizobium loti ABC transporter binding protein mll8567 SWALL:Q982N3 (EMBL:AP003014) (346 aa) fasta scores: E(): 2e-14, 28.82% id in 340 aa. CDS is extended at the C-terminus in comparison to orthologues; ABC transporter periplasmic binding protein 1051720..1052733 Burkholderia pseudomallei K96243 3095419 YP_110796.1 CDS BPSS0787 NC_006351.1 1052730 1054286 D Similar to Escherichia coli ribose transport ATP-binding protein rbsA SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 1.3e-41, 34.86% id in 499 aa, and to Streptomyces coelicolor ABC transporter protein, ATP binding component SCO2746 or SCC57A.17 SWALL:Q9RDI1 (EMBL:AL939113) (517 aa) fasta scores: E(): 5.3e-49, 40.51% id in 501 aa; ABC transporter ATP-binding protein 1052730..1054286 Burkholderia pseudomallei K96243 3095572 YP_110797.1 CDS BPSS0788 NC_006351.1 1054276 1055301 D Similar to Escherichia coli ribose transport system permease rbsC SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 6.4e-29, 36.67% id in 319 aa, and to Rhizobium loti ABC transporter permease mll8565 SWALL:Q982N4 (EMBL:AP003014) (338 aa) fasta scores: E(): 2.6e-29, 34.04% id in 329 aa; transport system permease 1054276..1055301 Burkholderia pseudomallei K96243 3095573 YP_110798.1 CDS BPSS0789 NC_006351.1 1055298 1055618 D Similar to Thermoplasma acidophilum hypothetical protein TA1392 SWALL:Q9HIE8 (EMBL:AL445067) (95 aa) fasta scores: E(): 0.00028, 27.77% id in 90 aa, and to Salmonella typhimurium, and Salmonella typhi hydrolase N-terminus stm0649 or sty0700 SWALL:Q8XFB1 (EMBL:AE008726) (113 aa) fasta scores: E(): 7.9e-05, 38.09% id in 84 aa. Possible pseudogene, similar to the N-terminal region of Escherichia coli altronate hydrolase UxaA SWALL:UXAA_ECOLI (SWALL:P42604) (495 aa) fasta scores: E(): 2.2e-05, 40% id in 70 aa; hydrolase N-terminus 1055298..1055618 Burkholderia pseudomallei K96243 3095617 YP_110799.1 CDS BPSS0790 NC_006351.1 1055653 1056975 D Similar to Salmonella typhi hydrolase C-terminus sty0701 SWALL:Q8Z8H4 (EMBL:AL627267) (390 aa) fasta scores: E(): 3.4e-39, 36.9% id in 401 aa, and to Brucella melitensis D-galactarate dehydratase bmeii0485 SWALL:Q8YCP3 (EMBL:AE009684) (433 aa) fasta scores: E(): 3.7e-34, 34.38% id in 413 aa. Possible pseudogene, similar to the C-terminal region of Escherichia coli altronate hydrolase UxaA SWALL:UXAA_ECOLI (SWALL:P42604) (495 aa) fasta scores: E(): 1.2e-20, 29.15% id in 415 aa; hydrolase C-terminus 1055653..1056975 Burkholderia pseudomallei K96243 3095169 YP_110800.1 CDS BPSS0791 NC_006351.1 1057247 1058086 D Similar to Xanthomonas axonopodis hypothetical protein xac4185 SWALL:AAM39020 (EMBL:AE012069) (290 aa) fasta scores: E(): 1.5e-51, 53.73% id in 281 aa, and to Xanthomonas campestris hypothetical protein xcc4066 SWALL:AAM43287 (EMBL:AE012528) (290 aa) fasta scores: E(): 1e-49, 53.02% id in 281 aa; hypothetical protein 1057247..1058086 Burkholderia pseudomallei K96243 3095170 YP_110801.1 CDS BPSS0792 NC_006351.1 1058226 1058969 D Similar to Escherichia coli oxidoreductase UcpA SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 4.2e-22, 41.5% id in 253 aa, and to Yersinia pestis oxidoreductase ypo1565 SWALL:Q8ZFW2 (EMBL:AJ414149) (246 aa) fasta scores: E(): 1.2e-52, 63.52% id in 244 aa; short chain dehydrogenase 1058226..1058969 Burkholderia pseudomallei K96243 3095165 YP_110802.1 CDS BPSS0793 NC_006351.1 1059045 1059887 D Similar to Yersinia pestis hydrolase ypo1566 SWALL:Q8ZFW1 (EMBL:AJ414149) (280 aa) fasta scores: E(): 1.3e-85, 72.76% id in 279 aa, and to Xanthomonas axonopodis 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase xac4187 SWALL:AAM39022 (EMBL:AE012069) (285 aa) fasta scores: E(): 3.4e-75, 65.1% id in 278 aa. Similar to BPSS2126, 73.285% identity (73.551% ungapped) in 277 aa overlap; fumarylacetoacetate (FAA) hydrolase 1059045..1059887 Burkholderia pseudomallei K96243 3095375 YP_110803.1 CDS BPSS0794 NC_006351.1 1060055 1060831 D Similar to Campylobacter jejuni oxidoreductase cj0485 SWALL:Q9PI24 (EMBL:AL139075) (262 aa) fasta scores: E(): 2e-41, 48.06% id in 258 aa, and to Bos taurus short-chain dehydrogenase/reductase SDR3 SWALL:Q9MYP6 (EMBL:AF202997) (270 aa) fasta scores: E(): 8.7e-22, 38.52% id in 244 aa; short chain dehydrogenase 1060055..1060831 Burkholderia pseudomallei K96243 3095376 YP_110804.1 CDS BPSS0795 NC_006351.1 1060867 1061205 D Similar to Xanthomonas campestris hypothetical protein xcc4070 SWALL:AAM43291 (EMBL:AE012529) (125 aa) fasta scores: E(): 4.9e-13, 42.85% id in 112 aa, and to Xanthomonas axonopodis hypothetical protein xac4189 SWALL:AAM39024 (EMBL:AE012069) (119 aa) fasta scores: E(): 8.9e-13, 41.07% id in 112 aa; hypothetical protein 1060867..1061205 Burkholderia pseudomallei K96243 3095209 YP_110805.1 CDS BPSS0796 NC_006351.1 1063333 1068294 D Similar to many low complexity proteins, including Rhizobium loti hypothetical glycine-rich protein mlr0587 SWALL:Q98MG7 (EMBL:AP002995) (3145 aa) fasta scores: E(): 1.3e-32, 24.78% id in 1743 aa. Possible alternative translational start site. Similar to BPSL1705, 65.523% identity (70.872% ungapped) in 1749 aa overlap; surface-exposed protein 1063333..1068294 Burkholderia pseudomallei K96243 3097081 YP_110806.1 CDS BPSS0796A NC_006351.1 1069167 1069508 R Similar to Rhodobacter capsulatus trans-acting regulatory protein HvrA SWALL:HVRA_RHOCA (SWALL:P42505) (102 aa) fasta scores: E(): 0.45, 29.41% id in 85 aa, and to Alcaligenes eutrophus H-NS-like protein SWALL:Q7WXF4 (EMBL:AY305378) (103 aa) fasta scores: E(): 2.4e-10, 44% id in 100 aa; H-NS-like protein complement(1069167..1069508) Burkholderia pseudomallei K96243 3097082 YP_110807.1 CDS BPSS0797 NC_006351.1 1069699 1070439 R Similar to the C-terminal region of Erwinia chrysanthemi pectin degradation repressor protein KdgR SWALL:KDGR_ERWCH (SWALL:P37728) (305 aa) fasta scores: E(): 2.2e-12, 29.71% id in 249 aa. Similar to Bacillus halodurans transcriptional regulator bh2137 SWALL:Q9KAZ9 (EMBL:AP001514) (251 aa) fasta scores: E(): 1e-13, 29.6% id in 250 aa. Similar to BPSS0284, 67.886% identity (67.886% ungapped) in 246 aa overlap; IclR family transcriptional regulator complement(1069699..1070439) Burkholderia pseudomallei K96243 3095069 YP_110808.1 CDS BPSS0798 NC_006351.1 1070554 1071018 R Poor database matches. C-terminus is similar to the C-terminal region of Caulobacter crescentus hypothetical protein CC0121 SWALL:Q9ABU9 (EMBL:AE005686) (151 aa) fasta scores: E(): 9.4, 30.08% id in 123 aa; hypothetical protein complement(1070554..1071018) Burkholderia pseudomallei K96243 3097238 YP_110809.1 CDS BPSS0799 NC_006351.1 1071034 1072254 R C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa2133 SWALL:Q9I1Y2 (EMBL:AE004640) (285 aa) fasta scores: E(): 4.7e-20, 34.22% id in 263 aa. Similar to the C-terminal region of Rhizobium loti hypothetical protein mlr5176 SWALL:Q98CF0 (EMBL:AP003005) (779 aa) fasta scores: E(): 2.8e-05, 23.17% id in 397 aa; hypothetical protein complement(1071034..1072254) Burkholderia pseudomallei K96243 3097239 YP_110810.1 CDS BPSS0800 NC_006351.1 1073131 1073745 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1836 SWALL:Q9I2Q9 (EMBL:AE004609) (193 aa) fasta scores: E(): 6.8e-25, 40.95% id in 188 aa, and to Streptomyces coelicolor tetr-family transcriptional regulatory protein sco4480 or scd65.23C SWALL:Q9F2Q9 (EMBL:AL939120) (205 aa) fasta scores: E(): 8e-13, 31.25% id in 192 aa; TetR family regulatory protein complement(1073131..1073745) Burkholderia pseudomallei K96243 3095067 YP_110811.1 CDS BPSS0801 NC_006351.1 1073860 1074297 D Similar to Pseudomonas aeruginosa hypothetical protein pa1835 SWALL:Q9I2R0 (EMBL:AE004609) (145 aa) fasta scores: E(): 1.5e-30, 60.28% id in 141 aa, and to Xanthomonas campestris hypothetical protein xcc3727 SWALL:AAM42985 (EMBL:AE012493) (158 aa) fasta scores: E(): 1.3e-18, 49.25% id in 134 aa; hypothetical protein 1073860..1074297 Burkholderia pseudomallei K96243 3095741 YP_110812.1 CDS BPSS0802 NC_006351.1 1074446 1075588 D Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 8.7e-34, 33.6% id in 369 aa, and to Ralstonia solanacearum amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.6e-60, 49.31% id in 367 aa. Similar to BPSL3284, 88.421% identity (88.421% ungapped) in 380 aa overlap; extracellular ligand binding protein 1074446..1075588 Burkholderia pseudomallei K96243 3095742 YP_110813.1 CDS BPSS0803 NC_006351.1 1076062 1076697 D Similar to Bacillus cereus hemolysin III SWALL:HLY3_BACCE (SWALL:P54176) (219 aa) fasta scores: E(): 1.2e-31, 46.46% id in 198 aa, and to Neisseria meningitidis haemolysin nma1900 SWALL:Q9JTB2 (EMBL:AL162757) (208 aa) fasta scores: E(): 1.5e-45, 58.17% id in 208 aa; hemolysin 1076062..1076697 Burkholderia pseudomallei K96243 3094994 YP_110814.1 CDS BPSS0804 NC_006351.1 1076755 1077132 R hypothetical protein complement(1076755..1077132) Burkholderia pseudomallei K96243 3095330 YP_110815.1 CDS BPSS0805 NC_006351.1 1077778 1079844 R Similar to Pseudomonas aeruginosa hypothetical protein pa1727 SWALL:Q9I310 (EMBL:AE004599) (685 aa) fasta scores: E(): 1.4e-108, 47.58% id in 683 aa, and to Xanthomonas campestris GGDEF family protein xcc1911 SWALL:AAM41200 (EMBL:AE012295) (696 aa) fasta scores: E(): 3.3e-108, 46.72% id in 687 aa; hypothetical protein complement(1077778..1079844) Burkholderia pseudomallei K96243 3095331 YP_110816.1 CDS BPSS0806 NC_006351.1 1080171 1080638 R Similar to Escherichia coli, Shigella flexneri, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 2.2e-18, 42.56% id in 148 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1377 or rs02081 SWALL:Q8XQA9 (EMBL:AL646084) (152 aa) fasta scores: E(): 6.2e-19, 42% id in 150 aa; leucine-responsive regulatory protein complement(1080171..1080638) Burkholderia pseudomallei K96243 3095387 YP_110817.1 CDS aroP NC_006351.1 1080971 1082356 D Similar to Escherichia coli aromatic amino acid transport protein AroP SWALL:AROP_ECOLI (SWALL:P15993) (457 aa) fasta scores: E(): 5e-119, 68% id in 450 aa, and to Yersinia pestis aromatic amino acid transport protein ypo3421 SWALL:Q8ZBI9 (EMBL:AJ414157) (465 aa) fasta scores: E(): 1.1e-127, 72.99% id in 448 aa; aromatic amino acid transport protein 1080971..1082356 Burkholderia pseudomallei K96243 3096175 YP_110818.1 CDS tyrB1 NC_006351.1 1082388 1083590 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1082388..1083590 Burkholderia pseudomallei K96243 3096837 YP_110819.1 CDS BPSS0809 NC_006351.1 1083912 1084301 D Similar to Ralstonia solanacearum hypothetical protein rsp1510 or rs03031 SWALL:Q8XPX6 (EMBL:AL646085) (132 aa) fasta scores: E(): 7e-36, 71.53% id in 130 aa, and to Streptomyces coelicolor hypothetical protein SCO7305 or SC5F8.15c SWALL:Q9K4K9 (EMBL:AL939131) (117 aa) fasta scores: E(): 2.5e-05, 31.96% id in 122 aa; hypothetical protein 1083912..1084301 Burkholderia pseudomallei K96243 3095857 YP_110820.1 CDS BPSS0810 NC_006351.1 1085445 1086068 D Similar to Rhizobium loti hypothetical protein mll3172 SWALL:Q98GU4 (EMBL:AP003001) (179 aa) fasta scores: E(): 5.5e-30, 49.12% id in 171 aa, and to Caulobacter crescentus acetyltransferase, GNAT family cc1083 SWALL:Q9A9B1 (EMBL:AE005785) (173 aa) fasta scores: E(): 1.9e-25, 45.56% id in 169 aa; hypothetical protein 1085445..1086068 Burkholderia pseudomallei K96243 3095858 YP_110821.1 CDS BPSS0811 NC_006351.1 1086233 1086967 R C-terminal region is similar to Bradyrhizobium japonicum ID748 SWALL:Q9AMY0 (EMBL:AF322013) (225 aa) fasta scores: E(): 1.6e-36, 48.5% id in 200 aa, and to the C-terminal region of Pseudomonas aeruginosa hypothetical protein pa1894 SWALL:Q9I2K3 (EMBL:AE004615) (230 aa) fasta scores: E(): 5.2e-24, 41.27% id in 189 aa; hypothetical protein complement(1086233..1086967) Burkholderia pseudomallei K96243 3095864 YP_110822.1 CDS BPSS0812 NC_006351.1 1086995 1088428 R Poor database matches. C-terminus is weakly similar to the C-terminal region of Streptomyces hygroscopicus OrfE protein SWALL:Q54310 (EMBL:X86780) (465 aa) fasta scores: E(): 0.0069, 24.92% id in 353 aa; hypothetical protein complement(1086995..1088428) Burkholderia pseudomallei K96243 3095409 YP_110823.1 CDS BPSS0812A NC_006351.1 1088798 1089277 D hypothetical protein 1088798..1089277 Burkholderia pseudomallei K96243 3095410 YP_110824.1 CDS BPSS0813 NC_006351.1 1090088 1091503 D Similar to the C-terminal regions of Anabaena sp. two-component sensor histidine kinase alr0642 SWALL:Q8YZ45 (EMBL:AP003583) (735 aa) fasta scores: E(): 5.4e-38, 32.41% id in 472 aa, and Anabaena sp. two-component sensor histidine kinase alr3225 SWALL:Q8YS66 (EMBL:AP003592) (986 aa) fasta scores: E(): 1.7e-33, 32.37% id in 451 aa. Possible gene remnant, CDS membrane spanning domains. C-terminal rgion is similar to C-terminal regions of BPSS1646, 50.765% identity (54.426% ungapped) in 327 aa overlap, and BPSL0703, 52.273% identity (54.949% ungapped) in 308 aa overlap; sensor histidine kinase 1090088..1091503 Burkholderia pseudomallei K96243 3095463 YP_110825.1 CDS BPSS0814 NC_006351.1 1091514 1091882 D Similar to Bacillus subtilis chemotaxis protein CheY homolog CheY or CheB SWALL:CHEY_BACSU (SWALL:P24072) (119 aa) fasta scores: E(): 6.4e-07, 32.43% id in 111 aa, and to Vibrio cholerae response regulator vc1082 SWALL:Q9KT23 (EMBL:AE004189) (121 aa) fasta scores: E(): 4.9e-17, 47.5% id in 120 aa. Similar to BPSS2344, 62.810% identity (62.810% ungapped) in 121 aa overlap; chemotaxis protein 1091514..1091882 Burkholderia pseudomallei K96243 3096165 YP_110826.1 CDS BPSS0815 NC_006351.1 1091866 1092486 D Similar to Vibrio cholerae hypothetical protein vc1083 SWALL:Q9KT22 (EMBL:AE004189) (194 aa) fasta scores: E(): 1.2e-12, 32.83% id in 201 aa. N-terminus is similar to the N-terminal rgion of Bacillus subtilis chemotaxis protein CheC SWALL:CHEC_BACSU (SWALL:P40403) (209 aa) fasta scores: E(): 0.0046, 28.22% id in 124 aa; hypothetical protein 1091866..1092486 Burkholderia pseudomallei K96243 3096166 YP_110827.1 CDS BPSS0816 NC_006351.1 1092521 1095061 R Internal region is similar to an internal region of Escherichia coli penicillin-binding protein 1c pbpc or b2519 SWALL:PBPC_ECOLI (SWALL:P76577) (770 aa) fasta scores: E(): 2.3e-29, 32.8% id in 631 aa. C-terminus is similar to the C-terminal region of Leptospira interrogans penicillin-binding protein 1F LA2187 SWALL:AAN49386 (EMBL:AE011390) (709 aa) fasta scores: E(): 3.8e-43, 35.27% id in 771 aa. Possible alternative translational start site; penicillin-binding protein complement(1092521..1095061) Burkholderia pseudomallei K96243 3095254 YP_110828.1 CDS BPSS0817 NC_006351.1 1095327 1101467 R Weakly similar to Anabaena sp. hypothetical protein ALL5100 SWALL:YFA0_ANASP (SWALL:Q8YM40) (1906 aa) fasta scores: E(): 4e-12, 21.2% id in 2056 aa; hypothetical protein complement(1095327..1101467) Burkholderia pseudomallei K96243 3096108 YP_110829.1 CDS BPSS0818 NC_006351.1 1102008 1102562 D Poor database matches. Weakly similar to an internal region of Neisseria meningitidis hypothetical protein Nmb0593 nmb0593 SWALL:Q9K0K2 (EMBL:AE002415) (808 aa) fasta scores: E(): 8.9, 26.28% id in 156 aa; hypothetical protein 1102008..1102562 Burkholderia pseudomallei K96243 3096109 YP_110830.1 CDS BPSS0819 NC_006351.1 1103628 1104098 D Similar to Streptomyces coelicolor hypothetical protein SCO4918 or SCK13.10c SWALL:Q9AD81 (EMBL:AL939121) (145 aa) fasta scores: E(): 0.62, 30.96% id in 155 aa; hypothetical protein 1103628..1104098 Burkholderia pseudomallei K96243 3095286 YP_110831.1 CDS BPSS0820 NC_006351.1 1104095 1106299 D Similar to Escherichia coli leucyl-tRNA synthetase LeuS SWALL:SYL_ECOLI (SWALL:P07813) (860 aa) fasta scores: E(): 1.1e-34, 30.27% id in 806 aa, and to Thermotoga maritima leucyl-tRNA synthetase leus or tm0168 SWALL:SYL_THEMA (SWALL:Q9WY15) (824 aa) fasta scores: E(): 7.5e-38, 33.33% id in 765 aa. CDS is truncated at the C-terminus in comparison to some orthologues; tRNA synthetase 1104095..1106299 Burkholderia pseudomallei K96243 3095822 YP_110832.1 CDS BPSS0821 NC_006351.1 1106296 1107216 D Poor database matches. C-terminal region is weakly similar to Halobacterium sp. hypothetical protein VNG0713C SWALL:Q9HRG3 (EMBL:AE005016) (231 aa) fasta scores: E(): 0.032, 29.74% id in 232 aa; hypothetical protein 1106296..1107216 Burkholderia pseudomallei K96243 3095823 YP_110833.1 CDS BPSS0822 NC_006351.1 1107219 1108121 D Poor database matches. Weakly similar to an internal region of Streptomyces coelicolor hypothetical protein SCO6522 or SC5C7.07 SWALL:O86704 (EMBL:AL939128) (480 aa) fasta scores: E(): 0.13, 29.41% id in 306 aa; hypothetical protein 1107219..1108121 Burkholderia pseudomallei K96243 3097044 YP_110834.1 CDS BPSS0823 NC_006351.1 1108118 1109731 D Poor database matches. Weakly similar to an internal region of Streptomyces coelicolor hypothetical protein SCO6994 or SC8f11.20c SWALL:Q9KZF9 (EMBL:AL939130) (1086 aa) fasta scores: E(): 1.7, 26.23% id in 587 aa; hypothetical protein 1108118..1109731 Burkholderia pseudomallei K96243 3095270 YP_110835.1 CDS BPSS0824 NC_006351.1 1109724 1110617 D Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 1.8e-24, 34.02% id in 291 aa, and to Pseudomonas aeruginosa hypothetical protein pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 1.1e-33, 40.07% id in 287 aa; dioxygenase 1109724..1110617 Burkholderia pseudomallei K96243 3095271 YP_110836.1 CDS BPSS0825 NC_006351.1 1110581 1111288 R Poor database matches. C-terminus is similar to the C-terminal region of Rhizobium loti hypothetical protein mlr1181 SWALL:Q98L47 (EMBL:AP002996) (218 aa) fasta scores: E(): 1.8e-12, 34.54% id in 165 aa. Possible alternative translational start site; hypothetical protein complement(1110581..1111288) Burkholderia pseudomallei K96243 3096947 YP_110837.1 CDS BPSS0826 NC_006351.1 1111300 1112457 D Similar to Streptomyces clavuligerus isopenicillin N epimerase CefD SWALL:CEFD_STRCL (SWALL:P18549) (397 aa) fasta scores: E(): 2.5e-28, 36.36% id in 385 aa, and to Ralstonia solanacearum isopenicillin N epimerase rsp0696 or rs01753 SWALL:Q8XRY5 (EMBL:AL646080) (419 aa) fasta scores: E(): 5.3e-39, 37.17% id in 390 aa; aminotransferase class-V 1111300..1112457 Burkholderia pseudomallei K96243 3096789 YP_110838.1 CDS BPSS0827 NC_006351.1 1113438 1115375 D C-terminus is similar to the C-terminal region of Vibrio parahaemolyticus microbial collagenase precursor PrtVp SWALL:COLA_VIBPA (SWALL:Q56696) (587 aa) fasta scores: E(): 3.4e-43, 31.36% id in 542 aa. Similar to the N-terminal region of Streptomyces coelicolor SC10A5.17 protein SCO5912 or SC10A5.17 SWALL:O54108 (EMBL:AL939125) (865 aa) fasta scores: E(): 2.8e-63, 35.88% id in 627 aa. Similar to BPSS0666, 81.329% identity (81.458% ungapped) in 632 aa overlap; peptidase 1113438..1115375 Burkholderia pseudomallei K96243 3096790 YP_110839.1 CDS BPSS0828 NC_006351.1 1115663 1116001 R Poor database matches. Similar to an internal region of Archaeoglobus fulgidus hypothetical protein AF0070 SWALL:Y070_ARCFU (SWALL:O30166) (353 aa) fasta scores: E(): 7.7, 27.45% id in 102 aa. Similar to BPSS1748, 51.042% identity (55.682% ungapped) in 96 aa overlap; hypothetical protein complement(1115663..1116001) Burkholderia pseudomallei K96243 3096527 YP_110840.1 CDS BPSS0829 NC_006351.1 1116654 1117820 R associated with the biosynthesis repression of 4-hydroxy-2-alkylquinolines (HAQs) and HAQ-analogs, which act as extracellular signals that interact with quorum sensing; monooxygenase complement(1116654..1117820) Burkholderia pseudomallei K96243 3095140 YP_110841.1 CDS BPSS0830 NC_006351.1 1118418 1119161 R N-terminal region is similar to Pseudomonas aeruginosa probable transcriptional regulator pa4499 SWALL:Q9HVS2 (EMBL:AE004863) (187 aa) fasta scores: E(): 1.9e-31, 55.49% id in 182 aa, and to Clostridium acetobutylicum predicted transcriptional regulator cac0841 SWALL:Q97KS5 (EMBL:AE007599) (179 aa) fasta scores: E(): 1.1e-08, 29.05% id in 179 aa. CDS is extended at the C-terminus in comparison to orthologues; DNA-binding protein complement(1118418..1119161) Burkholderia pseudomallei K96243 3095141 YP_110842.1 CDS BPSS0831 NC_006351.1 1119533 1119721 D hypothetical protein 1119533..1119721 Burkholderia pseudomallei K96243 3095804 YP_110843.1 CDS BPSS0832 NC_006351.1 1119990 1120478 R hypothetical protein complement(1119990..1120478) Burkholderia pseudomallei K96243 3096691 YP_110844.1 CDS BPSS0833 NC_006351.1 1120668 1120958 D Similar to Ralstonia solanacearum hypothetical protein rsc1512 or rs03792 SWALL:Q8XZ92 (EMBL:AL646065) (92 aa) fasta scores: E(): 1.2e-08, 46.42% id in 84 aa, and to Escherichia coli hypothetical protein YrdB SWALL:YRDB_ECOLI (SWALL:P45795) (85 aa) fasta scores: E(): 0.34, 32.87% id in 73 aa. Similar to BPSS0598, 59.140% identity (60.440% ungapped) in 93 aa overlap; hypothetical protein 1120668..1120958 Burkholderia pseudomallei K96243 3096692 YP_110845.1 CDS BPSS0834 NC_006351.1 1121027 1121263 D hypothetical protein 1121027..1121263 Burkholderia pseudomallei K96243 3096951 YP_110846.1 CDS BPSS0835 NC_006351.1 1121342 1121989 R Similar to Escherichia coli, and Shigella flexneri response regulator UvrYSWALL:UVRY_ECOLI (SWALL:P07027) (218 aa) fasta scores: E(): 4.4e-24, 36.84% id in 209 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc0192 or rs00624 SWALL:Q8Y2Y9 (EMBL:AL646057) (215 aa) fasta scores: E(): 7.9e-48, 60.09% id in 213 aa. Similar to BPSS1161, 81.308% identity (81.308% ungapped) in 214 aa overlap, and to BPSS0770, 50.000% identity (50.237% ungapped) in 212 aa overlap; response regulator protein complement(1121342..1121989) Burkholderia pseudomallei K96243 3094906 YP_110847.1 CDS BPSS0836 NC_006351.1 1122557 1123015 D Similar to Ralstonia solanacearum hypothetical protein rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 1e-14, 41.89% id in 148 aa, and to Pseudomonas aeruginosa hypothetical protein pa3309 SWALL:Q9HYT5 (EMBL:AE004753) (151 aa) fasta scores: E(): 2.1e-13, 40.94% id in 149 aa; universal stress protein 1122557..1123015 Burkholderia pseudomallei K96243 3094907 YP_110848.1 CDS BPSS0837 NC_006351.1 1123382 1124221 R Similar to Ralstonia solanacearum hypothetical protein rsc0185 or rs00616 SWALL:Q8Y2Z6 (EMBL:AL646057) (279 aa) fasta scores: E(): 5e-29, 35.56% id in 284 aa, and to Bradyrhizobium japonicum hypothetical protein SWALL:Q03082 (EMBL:L07487) (277 aa) fasta scores: E(): 1.5e-24, 38.24% id in 285 aa; hypothetical protein complement(1123382..1124221) Burkholderia pseudomallei K96243 3096403 YP_110849.1 CDS BPSS0838 NC_006351.1 1124218 1124712 R Similar to Ralstonia solanacearum hypothetical protein rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 3.7e-18, 46.75% id in 154 aa, and to Ralstonia solanacearum hypothetical protein rsc0184 or rs00615 SWALL:Q8Y2Z7 (EMBL:AL646057) (166 aa) fasta scores: E(): 2.3e-16, 41.61% id in 161 aa; universal stress protein complement(1124218..1124712) Burkholderia pseudomallei K96243 3095017 YP_110850.1 CDS BPSS0839 NC_006351.1 1124884 1125723 R Similar to Ralstonia solanacearum hypothetical protein rsc0185 or rs00616 SWALL:Q8Y2Z6 (EMBL:AL646057) (279 aa) fasta scores: E(): 5.5e-39, 42.14% id in 280 aa, and to Rhizobium loti hypothetical protein mll0142 SWALL:Q98NH2 (EMBL:AP002994) (277 aa) fasta scores: E(): 1.6e-23, 33.33% id in 285 aa; hypothetical protein complement(1124884..1125723) Burkholderia pseudomallei K96243 3095018 YP_110851.1 CDS BPSS0840 NC_006351.1 1125973 1127013 D Similar to Bacillus subtilis sorbitol dehydrogenase GutB SWALL:DHSO_BACSU (SWALL:Q06004) (352 aa) fasta scores: E(): 1.1e-25, 30.25% id in 347 aa, and to Ralstonia solanacearum probable zinc-dependent alcohol dehydrogenase oxidoreductase rsc0194 or rs00626 SWALL:Q8Y2Y7 (EMBL:AL646058) (345 aa) fasta scores: E(): 1.1e-97, 73.46% id in 343 aa; zinc-binding dehydrogenase 1125973..1127013 Burkholderia pseudomallei K96243 3095097 YP_110852.1 CDS BPSS0841 NC_006351.1 1127458 1128504 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0396 or rs00824 SWALL:Q8XSS1 (EMBL:AL646078) (326 aa) fasta scores: E(): 4.5e-39, 38.19% id in 322 aa, and to Xanthomonas campestris hypothetical protein xcc1731 SWALL:Q8P9W4 (EMBL:AE012274) (330 aa) fasta scores: E(): 1.3e-29, 35.46% id in 313 aa. Possible alternative upstream translational start sites. CDS is extended at the C-terminus in comparison to some orthologues; hypothetical protein 1127458..1128504 Burkholderia pseudomallei K96243 3095145 YP_110853.1 CDS BPSS0842 NC_006351.1 1128693 1129901 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1445 or rs03862 SWALL:Q8XZF6 (EMBL:AL646064) (400 aa) fasta scores: E(): 7.6e-85, 60% id in 400 aa, and to Klebsiella pneumoniae hypothetical protein SWALL:O87757 (EMBL:AJ011907) (404 aa) fasta scores: E(): 2.9e-76, 54.78% id in 376 aa; transporter protein 1128693..1129901 Burkholderia pseudomallei K96243 3095146 YP_110854.1 CDS BPSS0843 NC_006351.1 1130412 1131173 D Similar to Bacillus megaterium glucose 1-dehydrogenase II GdhII SWALL:DHG2_BACME (SWALL:P39483) (261 aa) fasta scores: E(): 4.2e-10, 30.54% id in 203 aa, and to Pseudomonas aeruginosa probable short chain dehydrogenase pa0117 SWALL:Q9I715 (EMBL:AE004450) (242 aa) fasta scores: E(): 6.2e-30, 41.9% id in 241 aa; short chain dehydrogenase 1130412..1131173 Burkholderia pseudomallei K96243 3095397 YP_110855.1 CDS BPSS0844 NC_006351.1 1131189 1132058 D Similar to Pseudomonas aeruginosa hypothetical protein pa2095 SWALL:Q9I220 (EMBL:AE004637) (281 aa) fasta scores: E(): 3.2e-55, 57.66% id in 274 aa, and to Streptomyces clavuligerus methyltransferase CmcJ SWALL:O85727 (EMBL:AF073896) (310 aa) fasta scores: E(): 9e-17, 34.24% id in 292 aa; hypothetical protein 1131189..1132058 Burkholderia pseudomallei K96243 3096187 YP_110856.1 CDS proY NC_006351.1 1133021 1134406 D Similar to Salmonella typhimurium proline-specific permease ProY SWALL:PROY_SALTY (SWALL:P37460) (456 aa) fasta scores: E(): 2.9e-93, 52.62% id in 439 aa, and to Bacillus subtilis amino acid transporter YtnA SWALL:O34618 (EMBL:AF008220) (463 aa) fasta scores: E(): 2.3e-119, 65.2% id in 457 aa. Similar to BPSL3256, 66.667% identity (66.667% ungapped) in 438 aa overlap; permease 1133021..1134406 Burkholderia pseudomallei K96243 3095836 YP_110857.1 CDS msr0960 NC_006351.1 1134960 1135202 R Similar to Rhizobium loti hypothetical protein msr0960 SWALL:Q98LM9 (EMBL:AP002996) (83 aa) fasta scores: E(): 7.7e-06, 41.79% id in 67 aa, and to Shewanella oneidensis transcriptional regulator, Cro/CI family SC1469 SWALL:AAN54530 (EMBL:AE015592) (84 aa) fasta scores: E(): 5.7e-05, 44.44% id in 63 aa; DNA-binding protein complement(1134960..1135202) Burkholderia pseudomallei K96243 3095137 YP_110858.1 CDS BPSS0846 NC_006351.1 1135347 1135643 D Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 6.3e-13, 52.04% id in 98 aa, and to Escherichia coli Lee encoded regulator Ler SWALL:Q8VTF2 (EMBL:AF328682) (129 aa) fasta scores: E(): 0.017, 28% id in 100 aa; hypothetical protein 1135347..1135643 Burkholderia pseudomallei K96243 3096188 YP_110859.1 CDS BPSS0847 NC_006351.1 1136037 1137353 R C-terminal region is similar to Xanthomonas axonopodis hypothetical protein xac0854 SWALL:AAM35742 (EMBL:AE011717) (434 aa) fasta scores: E(): 3.7e-81, 56.28% id in 382 aa. Full length CDS is similar to Agrobacterium tumefaciens acyl-CoA dehydrogenase Acd SWALL:Q8UAD5 (EMBL:AE009274) (451 aa) fasta scores: E(): 3.9e-41, 34.7% id in 438 aa; hypothetical protein complement(1136037..1137353) Burkholderia pseudomallei K96243 3095447 YP_110860.1 CDS BPSS0848 NC_006351.1 1137775 1138272 R Similar to Pseudomonas aeruginosa hypothetical protein pa2768 SWALL:Q9I075 (EMBL:AE004704) (160 aa) fasta scores: E(): 1.3e-34, 58.55% id in 152 aa; hypothetical protein complement(1137775..1138272) Burkholderia pseudomallei K96243 3096230 YP_110861.1 CDS BPSS0849 NC_006351.1 1138390 1139310 R Similar to Pseudomonas aeruginosa hypothetical protein pa0830 SWALL:Q9I5A9 (EMBL:AE004517) (277 aa) fasta scores: E(): 3e-33, 42% id in 269 aa, and to Caulobacter crescentus FF domain protein cc1344 SWALL:Q9A8K9 (EMBL:AE005810) (285 aa) fasta scores: E(): 1.4e-28, 37.18% id in 277 aa. Similar to 58.503% identity (59.930% ungapped) in 294 aa overlap, and to BPSS1914, 58.503% identity (59.930% ungapped) in 294 aa overlap, and to BPSS1822, 50.523% identity (51.971% ungapped) in 287 aa overlap; hypothetical protein complement(1138390..1139310) Burkholderia pseudomallei K96243 3096231 YP_110862.1 CDS BPSS0850 NC_006351.1 1139921 1140265 D Similar to Bradyrhizobium japonicum BLL1287 protein SWALL:BAC46552 (EMBL:AP005939) (115 aa) fasta scores: E(): 3e-14, 44.73% id in 114 aa, and to the C-terminal region of Xanthomonas axonopodis hypothetical protein xac4063 SWALL:AAM38898 (EMBL:AE012054) (154 aa) fasta scores: E(): 7.6e-05, 36.44% id in 107 aa; hypothetical protein 1139921..1140265 Burkholderia pseudomallei K96243 3095652 YP_110863.1 CDS BPSS0851 NC_006351.1 1140420 1141766 D Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 5e-62, 45.23% id in 451 aa, and to Rhizobium loti nitrilotriacetate monooxygenase component a mll9178 SWALL:Q981Y9 (EMBL:AP003015) (448 aa) fasta scores: E(): 1.8e-78, 50.57% id in 433 aa; nitrilotriacetate monooxygenase component A 1140420..1141766 Burkholderia pseudomallei K96243 3096750 YP_110864.1 CDS BPSS0852 NC_006351.1 1142274 1143245 D Similar to Crithidia fasciculata inosine-uridine preferring nucleoside hydrolase IunH SWALL:IUNH_CRIFA (SWALL:Q27546) (314 aa) fasta scores: E(): 5.3e-27, 36.73% id in 294 aa, and to Rhizobium meliloti nucleoside hydrolase r02906 or smc03175 SWALL:Q92LV9 (EMBL:AL591792) (317 aa) fasta scores: E(): 1.6e-60, 54.65% id in 322 aa; inosine-uridine preferring nucleoside hydrolase 1142274..1143245 Burkholderia pseudomallei K96243 3096751 YP_110865.1 CDS BPSS0853 NC_006351.1 1143269 1144201 R Similar to Escherichia coli ribokinase RbsK SWALL:RBSK_ECOLI (SWALL:P05054) (309 aa) fasta scores: E(): 2.4e-26, 34.65% id in 303 aa, and to Agrobacterium tumefaciens ribokinase ATU4847 or AGR_L_78 SWALL:Q8U6G0 (EMBL:AE009413) (312 aa) fasta scores: E(): 3.2e-63, 56.67% id in 307 aa; ribokinase complement(1143269..1144201) Burkholderia pseudomallei K96243 3096329 YP_110866.1 CDS BPSS0854 NC_006351.1 1144496 1144987 D Poor database matches. Weakly similar to Oryza sativa hypothetical protein SWALL:Q94LB7 (EMBL:AC084404) (179 aa) fasta scores: E(): 2.5, 29.44% id in 163 aa; hypothetical protein 1144496..1144987 Burkholderia pseudomallei K96243 3095448 YP_110867.1 CDS BPSS0855 NC_006351.1 1145206 1146900 D Similar to Pseudomonas aeruginosa hypothetical protein pa1865 SWALL:Q9I2N0 (EMBL:AE004612) (559 aa) fasta scores: E(): 4.5e-114, 53.97% id in 554 aa. Weakly similar to the C-terminal region of Homo sapiens hypothetical protein KIAA1018 SWALL:Q9Y2M0 (EMBL:AB023235) (1017 aa) fasta scores: E(): 3.3e-08, 23.76% id in 648 aa; hypothetical protein 1145206..1146900 Burkholderia pseudomallei K96243 3095449 YP_110868.1 CDS BPSS0856 NC_006351.1 1146897 1149164 D Similar to Pseudomonas aeruginosa hypothetical protein pa1866 SWALL:Q9I2M9 (EMBL:AE004612) (758 aa) fasta scores: E(): 3.9e-181, 61.17% id in 752 aa, and to Listeria innocua hypothetical protein lin0195 SWALL:Q92FB1 (EMBL:AL596163) (779 aa) fasta scores: E(): 8.1e-86, 35.45% id in 770 aa; hypothetical protein 1146897..1149164 Burkholderia pseudomallei K96243 3096201 YP_110869.1 CDS BPSS0857 NC_006351.1 1149199 1150482 D No significant database matches to the full length CDS. Internal region is similar to Pseudomonas sp. ON4a L-2-amino-thiazoline-4-carboxylic acid hydrolase SWALL:Q9FB06 (EMBL:AB029899) (183 aa) fasta scores: E(): 2.6e-35, 72.83% id in 173 aa, and to Zymomonas mobilis hypothetical protein SWALL:Q9FDK5 (EMBL:AF212041) (160 aa) fasta scores: E(): 4e-24, 56.95% id in 151 aa. Possible alternative translational start site. CDS is extended at the C-terminus in comparison to similar proteins, possible gene fusion; hypothetical protein 1149199..1150482 Burkholderia pseudomallei K96243 3095348 YP_110870.1 CDS BPSS0860 NC_006351.1 1151257 1152780 D Similar to Pseudomonas aeruginosa A-type flagellar hook-associated protein 2 FliD SWALL:FLDA_PSEAE (SWALL:O33421) (478 aa) fasta scores: E(): 9e-23, 28.36% id in 483 aa, and to Pseudomonas aeruginosa B-type flagellar hook-associated protein 2 pa1094 SWALL:FLDB_PSEAE (SWALL:Q9K3C5) (474 aa) fasta scores: E(): 4.8e-22, 28.99% id in 469 aa. CDS is extended at the N-terminus in comparison to orthologues. Similar to BPSL3320, 58.300% identity (58.765% ungapped) in 506 aa overlap; flagellar hook-associated protein 1151257..1152780 Burkholderia pseudomallei K96243 3096005 YP_110871.1 CDS BPSS0861 NC_006351.1 1153177 1154076 R Similar to Pseudomonas aeruginosa transcriptional regulator PtxR SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 3.5e-31, 36.98% id in 292 aa, and to Yersinia pestis LysR-family transcriptional regulatory protein ypo0799 SWALL:Q8ZHT5 (EMBL:AJ414144) (302 aa) fasta scores: E(): 1.4e-61, 54.2% id in 297 aa; LysR family transcriptional regulator complement(1153177..1154076) Burkholderia pseudomallei K96243 3097176 YP_110872.1 CDS BPSS0862 NC_006351.1 1154166 1154864 D Similar to Rhizobium loti hypothetical protein mll3417 SWALL:Q98GA6 (EMBL:AP003001) (216 aa) fasta scores: E(): 3.3e-19, 38.86% id in 211 aa, and to Yersinia pestis hypothetical protein ypo0801 SWALL:Q8ZHT3 (EMBL:AJ414144) (211 aa) fasta scores: E(): 4.8e-10, 31.75% id in 211 aa; hypothetical protein 1154166..1154864 Burkholderia pseudomallei K96243 3097177 YP_110873.1 CDS BPSS0864 NC_006351.1 1155494 1156441 D Similar to Xanthomonas axonopodis oxidoreductase xac0288 SWALL:AAM35180 (EMBL:AE011653) (323 aa) fasta scores: E(): 2e-70, 63.37% id in 314 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa3795 SWALL:Q9HXK2 (EMBL:AE004798) (316 aa) fasta scores: E(): 6.1e-70, 63.6% id in 316 aa; aldo/keto reductase 1155494..1156441 Burkholderia pseudomallei K96243 3096517 YP_110874.1 CDS BPSS0865 NC_006351.1 1156869 1157735 D Similar to Klebsiella aerogenes MoaF protein precursor MoaF SWALL:MOAF_KLEAE (SWALL:P54796) (262 aa) fasta scores: E(): 6.4e-38, 46.83% id in 284 aa, and to Pseudomonas aeruginosa hypothetical protein pa4087 SWALL:Q9HWU1 (EMBL:AE004825) (274 aa) fasta scores: E(): 1.6e-39, 50% id in 282 aa; hypothetical protein 1156869..1157735 Burkholderia pseudomallei K96243 3096518 YP_110875.2 CDS BPSS0866 NC_006351.1 1157732 1158565 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1157732..1158565 Burkholderia pseudomallei K96243 3096883 YP_110876.1 CDS BPSS0867 NC_006351.1 1159092 1159799 D Similar to Klebsiella aerogenes monoamine regulon transcriptional regulator MoaR SWALL:MOAR_KLEAE (SWALL:P54794) (227 aa) fasta scores: E(): 7.5e-08, 34.27% id in 213 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa4074 SWALL:Q9HWV4 (EMBL:AE004823) (222 aa) fasta scores: E(): 8.6e-26, 43.66% id in 213 aa; GerE family regulatory protein 1159092..1159799 Burkholderia pseudomallei K96243 3096754 YP_110877.1 CDS feaB NC_006351.1 1160056 1161558 D Similar to Escherichia coli phenylacetaldehyde dehydrogenase FeaB or PadA or MaoB SWALL:FEAB_ECOLI (SWALL:P80668) (499 aa) fasta scores: E(): 7.1e-100, 54.36% id in 493 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa4073 SWALL:Q9HWV5 (EMBL:AE004823) (495 aa) fasta scores: E(): 2.2e-114, 60.8% id in 495 aa. Similar to BPSL0051, 59.259% identity (59.504% ungapped) in 486 aa overlap; phenylacetaldehyde dehydrogenase 1160056..1161558 Burkholderia pseudomallei K96243 3095384 YP_110878.1 CDS BPSS0869 NC_006351.1 1161596 1162945 D Similar to Brucella melitensis omega-amino acid-pyruvate aminotransferase bmeii0130 SWALL:Q8YDP5 (EMBL:AE009651) (452 aa) fasta scores: E(): 4.7e-88, 52.48% id in 442 aa, and to Rhizobium sp. probable aminotransferase Y4UB SWALL:Y4UB_RHISN (SWALL:Q53196) (467 aa) fasta scores: E(): 4e-59, 41.37% id in 435 aa; hypothetical protein 1161596..1162945 Burkholderia pseudomallei K96243 3096755 YP_110879.1 CDS BPSS0870 NC_006351.1 1163154 1164644 D Similar to Pseudomonas aeruginosa probable amino acid permease pa4072 SWALL:Q9HWV6 (EMBL:AE004823) (496 aa) fasta scores: E(): 2.4e-117, 69.51% id in 469 aa, and to Salmonella typhimurium amino acid transporter stm3126 SWALL:Q8ZM30 (EMBL:AE008843) (499 aa) fasta scores: E(): 2.2e-110, 63.51% id in 466 aa; amino acid permease 1163154..1164644 Burkholderia pseudomallei K96243 3095068 YP_110880.1 CDS BPSS0871 NC_006351.1 1164641 1165261 D Weakly similar to Pseudomonas aeruginosa hypothetical protein pa4071 SWALL:Q9HWV7 (EMBL:AE004823) (192 aa) fasta scores: E(): 2.4e-05, 29.94% id in 187 aa; hypothetical protein 1164641..1165261 Burkholderia pseudomallei K96243 3096974 YP_110881.1 CDS BPSS0872 NC_006351.1 1165258 1166277 D Similar to Escherichia coli ethanolamine operon regulatory protein EutR SWALL:EUTR_ECOLI (SWALL:P36547) (350 aa) fasta scores: E(): 3.5e-29, 33.83% id in 334 aa, and to Salmonella typhimurium ethanolamine operon regulatory protein stm2454 SWALL:EUTR_SALTY (SWALL:Q9ZFU7) (350 aa) fasta scores: E(): 1.6e-27, 32.91% id in 322 aa; AraC family transcriptional regulator 1165258..1166277 Burkholderia pseudomallei K96243 3096975 YP_110882.1 CDS BPSS0873 NC_006351.1 1166507 1167709 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 6.8e-16, 30.84% id in 389 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 4.9e-35, 37.06% id in 402 aa; porin protein 1166507..1167709 Burkholderia pseudomallei K96243 3096602 YP_110883.1 CDS BPSS0874 NC_006351.1 1167973 1168290 D No significant database matches. Doubtful CDS; hypothetical protein 1167973..1168290 Burkholderia pseudomallei K96243 3096876 YP_110884.1 CDS BPSS0875 NC_006351.1 1168399 1169010 R Similar to Escherichia coli, and Shigella flexneri homoserine/homoserine lactone efflux protein RhtB SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 4.9e-09, 29.47% id in 190 aa, and to Rhizobium loti hypothetical protein mll4109 SWALL:Q98ES2 (EMBL:AP003003) (204 aa) fasta scores: E(): 1.1e-48, 63.54% id in 203 aa; LysE type translocator complement(1168399..1169010) Burkholderia pseudomallei K96243 3096877 YP_110885.1 CDS BPSS0876 NC_006351.1 1169182 1169661 D Similar to Caulobacter crescentus acetyltransferase, GNAT family cc3261 SWALL:Q9A3E3 (EMBL:AE005989) (173 aa) fasta scores: E(): 2.6e-22, 50.63% id in 158 aa, and to Pseudomonas aeruginosa probable acetyltransferase pa2271 SWALL:Q9I1K2 (EMBL:AE004653) (171 aa) fasta scores: E(): 1.2e-06, 33.54% id in 161 aa; GNAT family acetyltransferase 1169182..1169661 Burkholderia pseudomallei K96243 3095180 YP_110886.1 CDS BPSS0877 NC_006351.1 1169802 1170863 R Similar to Escherichia coli N-ethylmaleimide reductase NemA SWALL:NEMA_ECOLI (SWALL:P77258) (365 aa) fasta scores: E(): 8.5e-57, 49.03% id in 363 aa, and to Pseudomonas aeruginosa xenobiotic reductase pa4356 SWALL:Q9HW45 (EMBL:AE004851) (350 aa) fasta scores: E(): 8.3e-94, 70.77% id in 349 aa; N-ethylmaleimide reductase complement(1169802..1170863) Burkholderia pseudomallei K96243 3097092 YP_110887.1 CDS BPSS0878 NC_006351.1 1170913 1171218 R Similar to Pseudomonas aeruginosa hypothetical protein pa4354 SWALL:Q9HW47 (EMBL:AE004851) (100 aa) fasta scores: E(): 1.7e-20, 65.97% id in 97 aa, and to Rhizobium meliloti transcription regulator protein r01565 or smc01226 SWALL:Q92PZ8 (EMBL:AL591787) (96 aa) fasta scores: E(): 1e-17, 59.57% id in 94 aa; transcription regulator ArsR complement(1170913..1171218) Burkholderia pseudomallei K96243 3097093 YP_110888.1 CDS BPSS0879 NC_006351.1 1172547 1173671 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1e-14, 31.85% id in 405 aa, and to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 3.5e-69, 76.45% id in 378 aa; porin protein 1172547..1173671 Burkholderia pseudomallei K96243 3096508 YP_110889.1 CDS BPSS0880 NC_006351.1 1173890 1174300 R Similar to Escherichia coli, and Shigella flexneri regulator of nucleoside diphosphate kinase Rnk SWALL:RNK_ECOLI (SWALL:P40679) (136 aa) fasta scores: E(): 6.2e-12, 38.28% id in 128 aa, and to Ralstonia solanacearum regulator of nucleoside diphosphate kinase transcription regulator protein rsc2636 or rs04586 SWALL:Q8XW39 (EMBL:AL646071) (134 aa) fasta scores: E(): 1.1e-15, 44.36% id in 133 aa; transcription elongation factor complement(1173890..1174300) Burkholderia pseudomallei K96243 3096884 YP_110890.1 CDS BPSS0881 NC_006351.1 1174807 1175148 D No significant database matches. Similar to the C-terminal regions of BPSS1748, 50.538% identity (51.087% ungapped) in 93 aa overlap, and to BPSS0571, 50.000% identity (55.446% ungapped) in 112 aa overlap; hypothetical protein 1174807..1175148 Burkholderia pseudomallei K96243 3096885 YP_110891.1 CDS BPSS0882 NC_006351.1 1175353 1175817 R Similar to Xanthomonas axonopodis hypothetical protein xac3045 SWALL:AAM37890 (EMBL:AE011946) (142 aa) fasta scores: E(): 1.5e-22, 53.9% id in 141 aa, and to Xanthomonas campestris hypothetical protein xcc2862 SWALL:AAM42134 (EMBL:AE012399) (142 aa) fasta scores: E(): 1.8e-22, 54.61% id in 141 aa; hypothetical protein complement(1175353..1175817) Burkholderia pseudomallei K96243 3095478 YP_110892.1 CDS ribA NC_006351.1 1175994 1176647 D Similar to Escherichia coli, and Shigella flexneri GTP cyclohydrolase II RibA SWALL:GCH2_ECOLI (SWALL:P25523) (196 aa) fasta scores: E(): 1.2e-33, 52.66% id in 188 aa, and to the C-terminal region of Actinobacillus pleuropneumoniae riboflavin biosynthesis protein [includes: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase (dhbp synthase)] RibA SWALL:GCH2_ACTPL (SWALL:P50855) (401 aa) fasta scores: E(): 1e-33, 47.15% id in 193 aa. C-terminus is similar to the C-terminal region of BPSS1121, 54.088% identity (55.844% ungapped) in 159 aa overlap; GTP cyclohydrolase II 1175994..1176647 Burkholderia pseudomallei K96243 3095954 YP_110893.1 CDS BPSS0884 NC_006351.1 1176610 1177458 R hypothetical protein complement(1176610..1177458) Burkholderia pseudomallei K96243 3095910 YP_110894.1 CDS pmlI NC_006351.1 1177520 1178131 R Similar to Ralstonia solanacearum autoinducer synthesis protein SolI SWALL:SLI2_RALSO (SWALL:O30920) (204 aa) fasta scores: E(): 5.5e-51, 65.82% id in 199 aa, and to Burkholderia cepacia acyl homoserine lactone synthase CepI SWALL:Q9ZIU1 (EMBL:AF019654) (202 aa) fasta scores: E(): 6.6e-64, 76.84% id in 203 aa; N-acylhomoserine lactone synthase complement(1177520..1178131) Burkholderia pseudomallei K96243 3097087 YP_110895.1 CDS BPSS0886 NC_006351.1 1178356 1178799 R Poor database matches. Weakly similar to the N-terminal region of Rhizobium meliloti hypothetical protein rb0634 or smb21055 SWALL:Q92VR5 (EMBL:AL603644) (194 aa) fasta scores: E(): 1.3, 31.34% id in 134 aa; hypothetical protein complement(1178356..1178799) Burkholderia pseudomallei K96243 3095911 YP_110896.1 CDS pmlR NC_006351.1 1178873 1179592 D Similar to Ralstonia solanacearum transcriptional activator protein SolR SWALL:SLR2_RALSO (SWALL:O30919) (236 aa) fasta scores: E(): 2.2e-66, 67.79% id in 236 aa, and to Burkholderia cepacia transcriptional activator CepR SWALL:Q9ZIU0 (EMBL:AF019654) (239 aa) fasta scores: E(): 2.7e-81, 79.91% id in 239 aa; N-acylhomoserine lactone dependent regulatory protein 1178873..1179592 Burkholderia pseudomallei K96243 3095551 YP_110897.1 CDS BPSS0888 NC_006351.1 1179628 1180344 R Similar to Salmonella typhimurium Mg(2+) transport ATPase C MgtC SWALL:ATMC_SALTY (SWALL:P22037) (231 aa) fasta scores: E(): 2e-26, 41.92% id in 229 aa, and to Pseudomonas aeruginosa hypothetical protein pa4635 SWALL:Q9HVF6 (EMBL:AE004878) (234 aa) fasta scores: E(): 1.7e-34, 47.23% id in 235 aa; MgtC family protein complement(1179628..1180344) Burkholderia pseudomallei K96243 3095386 YP_110898.1 CDS BPSS0889 NC_006351.1 1181017 1182222 R Similar to Helicobacter pylori J99 hypothetical protein JHP0380 SWALL:YA44_HELPJ (SWALL:Q9ZM43) (370 aa) fasta scores: E(): 3.4e-24, 31.86% id in 386 aa, and to Campylobacter jejuni hypothetical protein CJ0846 SWALL:Y846_CAMJE (SWALL:Q9PP77) (374 aa) fasta scores: E(): 2.7e-23, 32.22% id in 391 aa; calcineurin-like phosphoesterase complement(1181017..1182222) Burkholderia pseudomallei K96243 3096981 YP_110899.1 CDS BPSS0890 NC_006351.1 1182285 1182869 R Similar to Xanthomonas axonopodis NADH dehydrogenase/NAD(P)H nitroreductase xac0554 SWALL:AAM35443 (EMBL:AE011683) (198 aa) fasta scores: E(): 1.2e-53, 74.24% id in 198 aa, and to Xanthomonas campestris NADH dehydrogenase/NAD(P)H nitroreductase xcc3605 SWALL:AAM42875 (EMBL:AE012481) (196 aa) fasta scores: E(): 1.8e-53, 74.34% id in 191 aa; hypothetical protein complement(1182285..1182869) Burkholderia pseudomallei K96243 3096982 YP_110900.1 CDS BPSS0891 NC_006351.1 1183002 1183628 D Similar to Escherichia coli alkylated DNA repair protein AlkB or AidD SWALL:ALKB_ECOLI (SWALL:P05050) (216 aa) fasta scores: E(): 0.15, 30.18% id in 222 aa, and to Pseudomonas aeruginosa hypothetical protein pa3306 SWALL:Q9HYT8 (EMBL:AE004753) (200 aa) fasta scores: E(): 1.2e-33, 50.75% id in 199 aa; 2OG-Fe(II) oxygenase 1183002..1183628 Burkholderia pseudomallei K96243 3096643 YP_110901.1 CDS BPSS0892 NC_006351.1 1183715 1184665 D Similar to Pseudomonas putida Pca regulon regulatory protein PcaR SWALL:PCAR_PSEPU (SWALL:Q52154) (291 aa) fasta scores: E(): 4.9e-15, 26.25% id in 278 aa. C-terminal region is similar to Pseudomonas aeruginosa probable transcriptional regulator pa3508 SWALL:Q9HYA1 (EMBL:AE004771) (277 aa) fasta scores: E(): 1.2e-41, 49.09% id in 275 aa. Similar to BPSS0900, 64.184% identity (65.108% ungapped) in 282 aa overlap; IclR family transcriptional regulator 1183715..1184665 Burkholderia pseudomallei K96243 3096969 YP_110902.1 CDS BPSS0893 NC_006351.1 1184982 1186070 R Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.5e-13, 33.16% id in 401 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 1e-29, 36.95% id in 368 aa; porin complement(1184982..1186070) Burkholderia pseudomallei K96243 3096970 YP_110903.1 CDS BPSS0894 NC_006351.1 1186505 1186822 D Similar to Pseudomonas aeruginosa naphthalene 1,2-dioxygenase system ferredoxin component NdoA or paha2 SWALL:NDOA_PSEAE (SWALL:Q51493) (103 aa) fasta scores: E(): 2.3e-09, 33.98% id in 103 aa, and to Acinetobacter sp. ADP1 hypothetical protein SWALL:O24846 (EMBL:AF009672) (101 aa) fasta scores: E(): 1.6e-17, 49% id in 100 aa; Rieske (2Fe-2S) domain-containing protein 1186505..1186822 Burkholderia pseudomallei K96243 3094948 YP_110904.1 CDS BPSS0895 NC_006351.1 1186824 1187135 D No significant database matches to the full length CDS. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa3501 SWALL:Q9HYA8 (EMBL:AE004770) (72 aa) fasta scores: E(): 0.0026, 36.06% id in 61 aa. Possible alternative translational start site; hypothetical protein 1186824..1187135 Burkholderia pseudomallei K96243 3096494 YP_110905.1 CDS BPSS0896 NC_006351.1 1187170 1188237 D Similar to Pseudomonas sp. vanillate O-demethylase oxygenase subunit VanA SWALL:VANA_PSESP (SWALL:O05616) (354 aa) fasta scores: E(): 4e-18, 30.44% id in 358 aa, and to Acinetobacter sp. ADP1 hypothetical protein SWALL:O24847 (EMBL:AF009672) (316 aa) fasta scores: E(): 2.1e-88, 62.97% id in 316 aa; Rieske (2Fe-2S) domain-containing protein 1187170..1188237 Burkholderia pseudomallei K96243 3096495 YP_110906.1 CDS BPSS0897 NC_006351.1 1188246 1189004 D member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 1188246..1189004 Burkholderia pseudomallei K96243 3096583 YP_110907.1 CDS BPSS0898 NC_006351.1 1189028 1189570 D Similar to Pseudomonas aeruginosa hypothetical protein pa3510 SWALL:Q9HY99 (EMBL:AE004771) (176 aa) fasta scores: E(): 5.9e-50, 71.25% id in 167 aa, and to Rhodococcus sp. hypothetical protein SWALL:BAC00796 (EMBL:AB070454) (171 aa) fasta scores: E(): 1.2e-24, 49.36% id in 158 aa; hypothetical protein 1189028..1189570 Burkholderia pseudomallei K96243 3096296 YP_110908.1 CDS BPSS0899 NC_006351.1 1189587 1190498 D Similar to Pseudomonas aeruginosa probable hydrolase pa3509 SWALL:Q9HYA0 (EMBL:AE004771) (289 aa) fasta scores: E(): 6e-33, 44.76% id in 277 aa, and to Agrobacterium tumefaciens hydrolase ATU4238 or AGR_L_1247 SWALL:Q8U861 (EMBL:AE009353) (286 aa) fasta scores: E(): 1.9e-10, 29.89% id in 291 aa; hydrolase 1189587..1190498 Burkholderia pseudomallei K96243 3096297 YP_110909.1 CDS BPSS0900 NC_006351.1 1190495 1191349 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3508 SWALL:Q9HYA1 (EMBL:AE004771) (277 aa) fasta scores: E(): 6.5e-43, 49.62% id in 268 aa, and weakly similar to Pseudomonas putida Pca regulon regulatory protein PcaR SWALL:PCAR_PSEPU (SWALL:Q52154) (291 aa) fasta scores: E(): 1.4e-12, 26.37% id in 254 aa. Similar to BPSS0892, 64.184% identity (65.108% ungapped) in 282 aa overlap; IclR family transcriptional regulator 1190495..1191349 Burkholderia pseudomallei K96243 3095918 YP_110910.1 CDS BPSS0901 NC_006351.1 1191346 1192143 D Similar to Streptomyces cinnamonensis monensin polyketide synthase ketoacyl reductase SWALL:DHKR_STRCM (SWALL:P41177) (261 aa) fasta scores: E(): 8.2e-19, 34.88% id in 258 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa3507 SWALL:Q9HYA2 (EMBL:AE004771) (265 aa) fasta scores: E(): 2.4e-60, 61.74% id in 264 aa; short chain dehydrogenase 1191346..1192143 Burkholderia pseudomallei K96243 3095315 YP_110911.1 CDS BPSS0902 NC_006351.1 1192136 1193809 D Similar to Pseudomonas aeruginosa probable decarboxylase pa3506 SWALL:Q9HYA3 (EMBL:AE004771) (560 aa) fasta scores: E(): 1.8e-134, 66.13% id in 561 aa. Weakly similar to Escherichia coli acetolactate synthase isozyme I large subunit IlvB SWALL:ILVB_ECOLI (SWALL:P08142) (562 aa) fasta scores: E(): 1.8e-32, 28.57% id in 532 aa; hypothetical protein 1192136..1193809 Burkholderia pseudomallei K96243 3095316 YP_110912.1 CDS BPSS0903 NC_006351.1 1193802 1194617 D catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 1193802..1194617 Burkholderia pseudomallei K96243 3096271 YP_110913.1 CDS BPSS0904 NC_006351.1 1194643 1196133 D Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 6.7e-69, 39.13% id in 488 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa3504 SWALL:Q9HYA5 (EMBL:AE004771) (494 aa) fasta scores: E(): 1.3e-129, 67.21% id in 488 aa; aldehyde dehydrogenase 1194643..1196133 Burkholderia pseudomallei K96243 3094986 YP_110914.1 CDS BPSS0905 NC_006351.1 1196150 1197115 D C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa3503 SWALL:Q9HYA6 (EMBL:AE004770) (211 aa) fasta scores: E(): 1.1e-60, 67.3% id in 208 aa. Full length CDS is weakly similar to Pseudomonas aeruginosa dioxygenase SWALL:O87625 (EMBL:AF087482) (309 aa) fasta scores: E(): 8.8e-13, 28.28% id in 297 aa. N-terminus is weakly similar to the N-terminal region of Rhodococcus rhodochrous metapyrocatechase CatA SWALL:CATA_RHORH (SWALL:Q53034) (318 aa) fasta scores: E(): 9.8e-05, 27.79% id in 277 aa; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1196150..1197115 Burkholderia pseudomallei K96243 3094987 YP_110915.1 CDS BPSS0906 NC_006351.1 1197141 1198355 D Similar to Escherichia coli 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component HcaD or PhdA or HcaA4 SWALL:HCAD_ECOLI (SWALL:P77650) (400 aa) fasta scores: E(): 1.8e-43, 38.76% id in 405 aa, and to Rhizobium loti ferredoxin reductase MLR5000 SWALL:Q98CU3 (EMBL:AP003005) (412 aa) fasta scores: E(): 8.1e-52, 44.87% id in 390 aa; pyridine nucleotide-disulfide oxidoreductase 1197141..1198355 Burkholderia pseudomallei K96243 3097198 YP_110916.1 CDS BPSS0907 NC_006351.1 1198390 1199796 D Similar to Acinetobacter calcoaceticus benzoate transport protein BenK SWALL:BENK_ACICA (SWALL:O30513) (466 aa) fasta scores: E(): 1.5e-22, 25.64% id in 429 aa, and to Agrobacterium tumefaciens MFS permease ATU5395 or AGR_PAT_571 SWALL:Q8UJT0 (EMBL:AE008961) (461 aa) fasta scores: E(): 5.3e-58, 37.5% id in 456 aa. CDS is extended at the N-terminus in comparison to some orthologues; transport protein 1198390..1199796 Burkholderia pseudomallei K96243 3096653 YP_110917.1 CDS BPSS0908 NC_006351.1 1200501 1202816 D C-terminal region is similar to the C-terminal region of Bradyrhizobium japonicum Blr5538 protein blr5538 SWALL:BAC50803 (EMBL:AP005955) (762 aa) fasta scores: E(): 3e-36, 32.9% id in 708 aa. Similar to an internal region of Xanthomonas axonopodis outer membrane protein xac3546 SWALL:Q8PGS0 (EMBL:AE012003) (2190 aa) fasta scores: E(): 2.3e-31, 32.42% id in 885 aa; surface-exposed protein 1200501..1202816 Burkholderia pseudomallei K96243 3096654 YP_110918.1 CDS BPSS0909 NC_006351.1 1202875 1203705 D C-terminus is similar to the C-terminal region of Escherichia coli outer membrane protein A precursor OmpA or TolG or Tut or Con SWALL:OMPA_ECOLI (SWALL:P02934) (346 aa) fasta scores: E(): 9.7e-16, 41.5% id in 159 aa. Full length CDS is similar to Haemophilus somnus antigen SWALL:Q48292 (EMBL:L07795) (273 aa) fasta scores: E(): 2e-10, 32.49% id in 277 aa; OmpA family protein 1202875..1203705 Burkholderia pseudomallei K96243 3095347 YP_110919.1 CDS BPSS0910 NC_006351.1 1203866 1204300 R Similar to Salmonella typhimurium, and Salmonella typhi protein nucleotide-binding protein stm0614 or sty0662 SWALL:Q8XGB9 (EMBL:AE008724) (142 aa) fasta scores: E(): 0.19, 28.16% id in 142 aa, and to Methanobacterium thermoautotrophicum conserved protein mth898 SWALL:O26984 (EMBL:AE000865) (149 aa) fasta scores: E(): 0.26, 29.16% id in 144 aa; hypothetical protein complement(1203866..1204300) Burkholderia pseudomallei K96243 3095039 YP_110920.1 CDS BPSS0911 NC_006351.1 1204825 1206318 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1204825..1206318 Burkholderia pseudomallei K96243 3095040 YP_110921.1 CDS BPSS0912 NC_006351.1 1206483 1206965 R Similar to Salmonella typhimurium, and Klebsiella aerogenes leucine-responsive regulatory protein Lrp SWALL:LRP_SALTY (SWALL:P37403) (163 aa) fasta scores: E(): 4.8e-17, 37.83% id in 148 aa, and to Pseudomonas putida Lrp-family transcriptional regulators MdeR SWALL:O33467 (EMBL:D89015) (159 aa) fasta scores: E(): 5.2e-28, 46.45% id in 155 aa; transcription regulator AsnC complement(1206483..1206965) Burkholderia pseudomallei K96243 3094914 YP_110922.1 CDS BPSS0913 NC_006351.1 1207153 1208454 D catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase 1207153..1208454 Burkholderia pseudomallei K96243 3096921 YP_110923.1 CDS BPSS0914 NC_006351.1 1208622 1208846 R hypothetical protein complement(1208622..1208846) Burkholderia pseudomallei K96243 3096922 YP_110924.1 CDS BPSS0915 NC_006351.1 1209283 1209984 D hypothetical protein 1209283..1209984 Burkholderia pseudomallei K96243 3096282 YP_110925.1 CDS BPSS0916 NC_006351.1 1210101 1210973 D Similar to Salmonella typhimurium N-hydroxyarylamine O-acetyltransferase NhoA SWALL:NHOA_SALTY (SWALL:Q00267) (281 aa) fasta scores: E(): 3e-28, 35.05% id in 271 aa, and to Rhizobium loti arylamine N-acetyltransferase mlr4870 SWALL:Q98D42 (EMBL:AP003005) (278 aa) fasta scores: E(): 4.7e-39, 43.11% id in 276 aa; N-hydroxyarylamine O-acetyltransferase 1210101..1210973 Burkholderia pseudomallei K96243 3095584 YP_110926.1 CDS BPSS0917 NC_006351.1 1211259 1211816 D Similar to Rhizobium meliloti hypothetical protein r02764 or smc03980 SWALL:Q92M80 (EMBL:AL591791) (196 aa) fasta scores: E(): 3e-26, 44.08% id in 186 aa, and to Agrobacterium tumefaciens hypothetical protein atu5439 SWALL:Q8UJN7 (EMBL:AE008964) (195 aa) fasta scores: E(): 7e-24, 44.08% id in 186 aa; hypothetical protein 1211259..1211816 Burkholderia pseudomallei K96243 3095585 YP_110927.1 CDS BPSS0918 NC_006351.1 1211936 1212397 R Similar to Agrobacterium tumefaciens hypothetical protein ATU0237 or AGR_C_402 SWALL:Q8UIQ6 (EMBL:AE008996) (152 aa) fasta scores: E(): 2.8e-28, 55.55% id in 153 aa, and to Rhizobium meliloti hypothetical protein r00359 or smc01160 SWALL:Q92SL2 (EMBL:AL591783) (152 aa) fasta scores: E(): 5.4e-25, 54% id in 150 aa; DNA-binding protein complement(1211936..1212397) Burkholderia pseudomallei K96243 3095408 YP_110928.1 CDS BPSS0919 NC_006351.1 1212527 1213438 D Similar to Agrobacterium tumefaciens oxidoreductase ATU0238 or AGR_C_405 SWALL:Q8UIQ5 (EMBL:AE008996) (297 aa) fasta scores: E(): 3e-50, 50.16% id in 297 aa, and to the C-terminal region of Bacillus sp. NADH dehydrogenase AhpF or Ndh SWALL:DHNA_BACSP (SWALL:P26829) (519 aa) fasta scores: E(): 4.9e-07, 25.08% id in 311 aa; hypothetical protein 1212527..1213438 Burkholderia pseudomallei K96243 3096911 YP_110929.1 CDS BPSS0920 NC_006351.1 1214231 1215166 R Similar to Escherichia coli cyn operon transcriptional activator CynR SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 5.6e-17, 31.29% id in 262 aa, and to Rhizobium leguminosarum similarity to members of the LysR family SWALL:Q52868 (EMBL:U39409) (300 aa) fasta scores: E(): 1.4e-24, 31.37% id in 290 aa; LysR family transcriptional regulator complement(1214231..1215166) Burkholderia pseudomallei K96243 3095379 YP_110930.1 CDS BPSS0921 NC_006351.1 1215284 1216702 D Similar to Bradyrhizobium japonicum BLL7601 protein SWALL:BAC52866 (EMBL:AP005962) (461 aa) fasta scores: E(): 5.8e-106, 56.36% id in 456 aa, and to Streptomyces coelicolor peptidase SCO5185 or 2SC3B6.09 SWALL:Q9FCK3 (EMBL:AL939122) (470 aa) fasta scores: E(): 7.6e-26, 30.1% id in 475 aa; hypothetical protein 1215284..1216702 Burkholderia pseudomallei K96243 3096860 YP_110931.1 CDS BPSS0922 NC_006351.1 1216729 1218006 D Similar to Salmonella typhimurium, and Salmonella typhi citrate-proton symporter CitA SWALL:CIT1_SALTY (SWALL:P24115) (434 aa) fasta scores: E(): 6.4e-49, 35.28% id in 411 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4343 SWALL:Q9HW58 (EMBL:AE004850) (439 aa) fasta scores: E(): 1.2e-57, 40.52% id in 417 aa; transporter protein 1216729..1218006 Burkholderia pseudomallei K96243 3096861 YP_110932.1 CDS BPSS0923 NC_006351.1 1218570 1219523 R Similar to Mycobacterium tuberculosis probable oxidoreductase EphD or rv2214c or mt2270 or mtcy190.25c SWALL:EPHD_MYCTU (SWALL:Q10402) (592 aa) fasta scores: E(): 4.8e-17, 34.36% id in 323 aa. N-terminus is similar to the N-terminal region of Pseudomonas aeruginosa probable short-chain dehydrogenase pa3324 SWALL:Q9HYS1 (EMBL:AE004754) (592 aa) fasta scores: E(): 9e-27, 48.79% id in 291 aa; hydrolase complement(1218570..1219523) Burkholderia pseudomallei K96243 3096988 YP_110933.1 CDS BPSS0924 NC_006351.1 1219535 1220449 R Similar to Pseudomonas aeruginosa hypothetical protein pa1542 SWALL:Q9I3H1 (EMBL:AE004582) (278 aa) fasta scores: E(): 2.4e-34, 43.46% id in 260 aa, and to Pseudomonas aeruginosa hypothetical protein pa0830 SWALL:Q9I5A9 (EMBL:AE004517) (277 aa) fasta scores: E(): 2.3e-33, 41.72% id in 266 aa. Similar to BPSS1914, 68.942% identity (69.896% ungapped) in 293 aa overlap, and to BPSS1822, 61.938% identity (63.028% ungapped) in 289 aa overlap, and to BPSS0849, 58.503% identity (59.930% ungapped) in 294 aa overlap; hypothetical protein complement(1219535..1220449) Burkholderia pseudomallei K96243 3096634 YP_110934.1 CDS BPSS0925 NC_006351.1 1220446 1221372 R Similar to Pseudomonas paucimobilis C alpha-dehydrogenase LigD SWALL:LIGD_PSEPA (SWALL:Q01198) (305 aa) fasta scores: E(): 4.2e-16, 30.13% id in 292 aa. Previously sequenced as Burkholderia pseudomallei hypothetical protein LPW137-138 SWALL:Q9APG2 (EMBL:AF298896) (308 aa) fasta scores: E(): 5.5e-117, 100% id in 308 aa. Similar to BPSS1968, 53.378% identity (54.110% ungapped) in 296 aa overlap; short chain dehydrogenase complement(1220446..1221372) Burkholderia pseudomallei K96243 3096635 YP_110935.1 CDS BPSS0926 NC_006351.1 1221400 1222989 R Similar to Pseudomonas fluorescens flavin-binding monooxygenase SWALL:O87636 (EMBL:AF090329) (512 aa) fasta scores: E(): 3.7e-142, 63.7% id in 507 aa, and weakly similar to Acinetobacter sp cyclohexanone monooxygenase SWALL:CYMO_ACISP (SWALL:P12015) (542 aa) fasta scores: E(): 2.2e-23, 28.17% id in 504 aa; flavin-binding monooxygenase-like protein complement(1221400..1222989) Burkholderia pseudomallei K96243 3095310 YP_110936.1 CDS BPSS0927 NC_006351.1 1223235 1223885 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc3353 or rs02628 SWALL:Q8XU41 (EMBL:AL646074) (253 aa) fasta scores: E(): 2.4e-20, 41.96% id in 224 aa, and to Rhizobium loti hypothetical protein mll3549 SWALL:Q98G00 (EMBL:AP003002) (224 aa) fasta scores: E(): 1.1e-07, 35.18% id in 216 aa; hypothetical protein complement(1223235..1223885) Burkholderia pseudomallei K96243 3095052 YP_110937.1 CDS BPSS0928 NC_006351.1 1224086 1225069 R Similar to Escherichia coli aliphatic sulfonates binding protein precursor SsuA SWALL:SSUA_ECOLI (SWALL:P75853) (319 aa) fasta scores: E(): 3.5e-46, 43.97% id in 307 aa, and to Ralstonia solanacearum alkanesulfonates binding protein precursor rsp1383 or rs02075 SWALL:Q8XQA3 (EMBL:AL646084) (334 aa) fasta scores: E(): 2.2e-74, 61.46% id in 327 aa. Similar to BPSL1252, 50.485% identity (50.980% ungapped) in 309 aa overlap; aliphatic sulfonates binding protein precursor complement(1224086..1225069) Burkholderia pseudomallei K96243 3095053 YP_110938.1 CDS BPSS0929 NC_006351.1 1225194 1226000 R Similar to Ralstonia solanacearum probable transcription regulator protein rsc3080 or rs00531 SWALL:Q8XUV3 (EMBL:AL646073) (256 aa) fasta scores: E(): 5.6e-48, 56.66% id in 240 aa, and to Streptomyces coelicolor MerR-family transcriptional regulator SCO3173 or SCE87.24 SWALL:Q9RKB4 (EMBL:AL939115) (215 aa) fasta scores: E(): 3.2e-19, 39.46% id in 223 aa; hypothetical protein complement(1225194..1226000) Burkholderia pseudomallei K96243 3095715 YP_110939.1 CDS BPSS0930 NC_006351.1 1226079 1226645 R Similar to Alcaligenes faecalis phosphinothricin N-acetyltransferase Pat SWALL:PAT_ALCFA (SWALL:P31668) (197 aa) fasta scores: E(): 8.3e-36, 59.76% id in 169 aa, and to Streptomyces hygroscopicus phosphinothricin N-acetyltransferase Bar SWALL:PAT_STRHY (SWALL:P16426) (183 aa) fasta scores: E(): 2.8e-16, 38.85% id in 175 aa; phosphinothricin N-acetyltransferase complement(1226079..1226645) Burkholderia pseudomallei K96243 3097010 YP_110940.1 CDS BPSS0931 NC_006351.1 1227374 1228171 D Poor database matches. Weakly similar to the C-terminal region of Heterodoxus macropus NADH dehydrogenase subunit 2 Nad2 SWALL:Q9B8G3 (EMBL:AF270939) (298 aa) fasta scores: E(): 2.1, 25.24% id in 202 aa; hypothetical protein 1227374..1228171 Burkholderia pseudomallei K96243 3097011 YP_110941.1 CDS BPSS0932 NC_006351.1 1228206 1229720 R Similar to the C-terminal regions of Streptomyces coelicolor integral membrane transport protein SCO2344 or SCC8A.02c SWALL:Q9KY46 (EMBL:AL939112) (689 aa) fasta scores: E(): 5.7e-93, 52.89% id in 501 aa, and to Streptomyces coelicolor exporter SCO3366 or SCE94.17c SWALL:Q9X8M3 (EMBL:AL939116) (531 aa) fasta scores: E(): 1.6e-85, 46.42% id in 504 aa; membrane transport protein complement(1228206..1229720) Burkholderia pseudomallei K96243 3095364 YP_110942.1 CDS BPSS0933 NC_006351.1 1229959 1231515 D Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 4.2e-61, 44.29% id in 526 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis transmembrane protein rsp0303 or rs05471 SWALL:Q8XT14 (EMBL:AL646077) (515 aa) fasta scores: E(): 1.3e-76, 50.78% id in 512 aa. CDS is truncated at the C-terminus in comparison to some orthologues. Similar to N-terminal region of BPSL1829, 51.908% identity (52.510% ungapped) in 524 aa overlap; methyl-accepting chemotaxis protein 1229959..1231515 Burkholderia pseudomallei K96243 3097215 YP_110943.1 CDS BPSS0934 NC_006351.1 1231748 1233412 R hypothetical protein complement(1231748..1233412) Burkholderia pseudomallei K96243 3097216 YP_110944.1 CDS BPSS0935 NC_006351.1 1234055 1234963 R Poor database matches. C-terminus is weakly similar to the N-terminal region of Bradyrhizobium japonicum transcriptional regulatory protein FixJ SWALL:FIXJ_BRAJA (SWALL:P23221) (205 aa) fasta scores: E(): 0.02, 29.26% id in 123 aa; hypothetical protein complement(1234055..1234963) Burkholderia pseudomallei K96243 3096206 YP_110945.1 CDS BPSS0936 NC_006351.1 1235142 1236470 D Similar to Rhizobium meliloti amino acid deaminase transmembrane protein r02931 or smc03200 SWALL:Q92LU0 (EMBL:AL591792) (445 aa) fasta scores: E(): 5.5e-50, 37.41% id in 441 aa, and to Corynebacterium sp. sarcosine oxidase beta subunit SoxB SWALL:SOXB_CORS1 (SWALL:P40875) (405 aa) fasta scores: E(): 1.8e-10, 25.33% id in 446 aa; hypothetical protein 1235142..1236470 Burkholderia pseudomallei K96243 3094952 YP_110946.1 CDS BPSS0937 NC_006351.1 1236747 1237856 D Similar to Streptomyces coelicolor membrane protein SCO3826 or SCGD3.27c SWALL:Q9XA52 (EMBL:AL939117) (365 aa) fasta scores: E(): 7.7e-32, 33.43% id in 344 aa, and to Mycobacterium tuberculosis hypothetical protein rv3200c or mtv014.44c or mt3294 SWALL:O53346 (EMBL:AL021646) (355 aa) fasta scores: E(): 1.7e-31, 33.12% id in 320 aa; hypothetical protein 1236747..1237856 Burkholderia pseudomallei K96243 3094953 YP_110947.1 CDS BPSS0938 NC_006351.1 1237920 1238810 R Similar to Streptomyces coelicolor epoxide hydrolase SCOo6277 or SC1G7.03 SWALL:Q93S12 (EMBL:AL939127) (286 aa) fasta scores: E(): 1.5e-35, 40.82% id in 267 aa. Weakly similar to Glycine max epoxide hydrolase SWALL:O49857 (EMBL:X78548) (341 aa) fasta scores: E(): 3.6e-12, 28% id in 275 aa; hypothetical protein complement(1237920..1238810) Burkholderia pseudomallei K96243 3096697 YP_110948.1 CDS BPSS0939 NC_006351.1 1239185 1239583 D Similar to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 6.5e-15, 40.47% id in 126 aa, and to Pseudomonas aeruginosa hypothetical protein pa4486 SWALL:Q9HVT5 (EMBL:AE004862) (128 aa) fasta scores: E(): 1.5e-24, 59.2% id in 125 aa; carboxymuconolactone decarboxylase 1239185..1239583 Burkholderia pseudomallei K96243 3097273 YP_110949.1 CDS BPSS0940 NC_006351.1 1240463 1241416 D catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 1240463..1241416 Burkholderia pseudomallei K96243 3097274 YP_110950.1 CDS BPSS0941 NC_006351.1 1241388 1242260 R Similar to Agrobacterium tumefaciens esterase/lipase ATU2002 or AGR_C_3637 SWALL:Q8UDW6 (EMBL:AE009152) (322 aa) fasta scores: E(): 6.1e-17, 33.11% id in 305 aa. C-terminal region is weakly similar to Caldocellum saccharolyticum acetyl esterase XynC SWALL:XYNC_CALSA (SWALL:P23553) (266 aa) fasta scores: E(): 5.6e-11, 26.39% id in 269 aa. Possible alternative translational start site; hypothetical protein complement(1241388..1242260) Burkholderia pseudomallei K96243 3095179 YP_110951.1 CDS BPSS0942 NC_006351.1 1242298 1243464 R Similar to Rhodobacter sphaeroides OpgC SWALL:Q9FA51 (EMBL:AF016298) (399 aa) fasta scores: E(): 1.1e-15, 30.33% id in 389 aa, and to Rhizobium meliloti hypothetical transmembrane protein smc04381 r03285 or smc04381 SWALL:Q92L11 (EMBL:AL591793) (385 aa) fasta scores: E(): 7.2e-18, 29.28% id in 362 aa. N-terminal region is similar to the C-termial region of BPSS2162, 50.992% identity (52.023% ungapped) in 353 aa overlap; hypothetical protein complement(1242298..1243464) Burkholderia pseudomallei K96243 3096029 YP_110952.1 CDS BPSS0943 NC_006351.1 1243885 1245039 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.8e-19, 34.21% id in 377 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.1e-87, 60.1% id in 386 aa. Similar to BPSL2559, 53.197% identity (55.914% ungapped) in 391 aa overlap, and to BPSL3036, 50.370% identity (55.890% ungapped) in 405 aa overlap, and to BPSS0757, 50.382% identity (55.000% ungapped) in 393 aa overlap; porin protein 1243885..1245039 Burkholderia pseudomallei K96243 3096030 YP_110953.1 CDS BPSS0944 NC_006351.1 1245541 1246452 R Similar to Chromatium vinosum rubisco operon transcriptional regulator RbcR SWALL:RBCR_CHRVI (SWALL:P25544) (302 aa) fasta scores: E(): 2.5e-13, 24.54% id in 273 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1267 or rs05312 SWALL:Q8XQG0 (EMBL:AL646083) (294 aa) fasta scores: E(): 3.8e-64, 57.73% id in 291 aa; LysR family transcriptional regulator complement(1245541..1246452) Burkholderia pseudomallei K96243 3096786 YP_110954.1 CDS BPSS0945 NC_006351.1 1247073 1248020 D Similar to the C-terminal regions of Escherichia coli, and Shigella flexneri lipoprotein NlpD precursor SWALL:NLPD_ECOLI (SWALL:P33648) (379 aa) fasta scores: E(): 1.3e-12, 32.25% id in 310 aa, and to Rhodocyclus gelatinosus NlpD protein SWALL:Q9JP90 (EMBL:AB034704) (314 aa) fasta scores: E(): 1.4e-28, 42.95% id in 305 aa; peptidase 1247073..1248020 Burkholderia pseudomallei K96243 3094901 YP_110955.1 CDS penA NC_006351.1 1248195 1249082 D Similar to Yersinia enterocolitica beta-lactamase precursor BlaA SWALL:BLAC_YEREN (SWALL:Q01166) (294 aa) fasta scores: E(): 1.5e-60, 57.43% id in 289 aa. Previously sequenced as Burkholderia pseudomallei class A beta-lactamase PenA or Bla-BPS-1d SWALL:Q932Y0 (EMBL:AY032872) (295 aa) fasta scores: E(): 4.9e-114, 100% id in 295 aa; beta-lactamase precursor 1248195..1249082 Burkholderia pseudomallei K96243 3095241 YP_110956.1 CDS BPSS0948 NC_006351.1 1249773 1250645 D Similar to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.6e-32, 37.93% id in 290 aa, and to Pseudomonas putida transcriptional regulator PP1393 SWALL:AAN67016 (EMBL:AE016779) (291 aa) fasta scores: E(): 4.4e-49, 51.86% id in 268 aa; LysR family transcriptional regulator 1249773..1250645 Burkholderia pseudomallei K96243 3094902 YP_110957.1 CDS BPSS0949 NC_006351.1 1250756 1251091 R Poor database matches. N-terminus is similar to the N-terminal region of Escherichia coli hypothetical protein YmdA SWALL:YMDA_ECOLI (SWALL:P75917) (103 aa) fasta scores: E(): 2.5, 32.85% id in 70 aa; hypothetical protein complement(1250756..1251091) Burkholderia pseudomallei K96243 3096121 YP_110958.1 CDS BPSS0950 NC_006351.1 1251939 1252727 R Similar to Streptococcus pneumoniae oligopeptide transport ATP-binding protein AmiF SWALL:AMIF_STRPN (SWALL:P18766) (308 aa) fasta scores: E(): 5.8e-29, 43.13% id in 255 aa, and to Rhizobium meliloti dipeptide transport ATP-binding ABC transporter protein r02409 or smc01529 SWALL:Q92N30 (EMBL:AL591790) (255 aa) fasta scores: E(): 2.5e-46, 59.44% id in 254 aa; ABC transporter ATP-binding protein complement(1251939..1252727) Burkholderia pseudomallei K96243 3095441 YP_110959.1 CDS BPSS0951 NC_006351.1 1252715 1253584 R Similar to the N-terminal region of Bacillus subtilis oligopeptide transport ATP-binding protein OppD SWALL:OPPD_BACSU (SWALL:P24136) (358 aa) fasta scores: E(): 8.4e-32, 42.5% id in 280 aa, and to the full length Rhizobium meliloti dipeptide transport ATP-binding ABC transporter protein r02410 or smc01528 SWALL:Q92N29 (EMBL:AL591790) (277 aa) fasta scores: E(): 2.5e-48, 59.05% id in 276 aa; ABC transporter ATP-binding protein complement(1252715..1253584) Burkholderia pseudomallei K96243 3095442 YP_110960.1 CDS BPSS0952 NC_006351.1 1253586 1254527 R Similar to Escherichia coli dipeptide transport system permease DppC SWALL:DPPC_ECOLI (SWALL:P37315) (300 aa) fasta scores: E(): 1.1e-43, 44.36% id in 275 aa, and to Rhizobium meliloti dipeptide transport system permease ABC transporter protein r02411 or smc01527 SWALL:Q92N28 (EMBL:AL591790) (310 aa) fasta scores: E(): 4.5e-74, 67.56% id in 296 aa. CDS is extended at the N-terminus in comparison to some orthologues; dipeptide transport system permease complement(1253586..1254527) Burkholderia pseudomallei K96243 3095431 YP_110961.1 CDS BPSS0953 NC_006351.1 1254570 1255640 R Similar to Escherichia coli dipeptide transport system permease DppB SWALL:DPPB_ECOLI (SWALL:P37316) (339 aa) fasta scores: E(): 1.4e-44, 43.21% id in 324 aa, and to Rhizobium meliloti dipeptide transport system permease ABC transporter protein r02412 or smc01526 SWALL:Q92N27 (EMBL:AL591790) (347 aa) fasta scores: E(): 3.9e-78, 62.24% id in 339 aa. CDS is extended at the N-terminus in comparison to some orthologues; dipeptide transport system permease complement(1254570..1255640) Burkholderia pseudomallei K96243 3096578 YP_110962.1 CDS BPSS0954 NC_006351.1 1255661 1257262 R Similar to Rhizobium meliloti dipeptide binding periplasmic protein r02413 or smc01525 SWALL:Q92N26 (EMBL:AL591790) (546 aa) fasta scores: E(): 1e-68, 51.3% id in 536 aa, and to Agrobacterium tumefaciens ABC transporter substrate binding protein ATU4431 or AGR_L_873 SWALL:Q8U7L8 (EMBL:AE009372) (545 aa) fasta scores: E(): 1.5e-66, 51.61% id in 527 aa. Similar to BPSS0964, 72.744% identity (73.019% ungapped) in 532 aa overlap; extracellular solute-binding protein complement(1255661..1257262) Burkholderia pseudomallei K96243 3096579 YP_110963.1 CDS BPSS0955 NC_006351.1 1257411 1257980 R catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis; D-alanyl-D-alanine dipeptidase complement(1257411..1257980) Burkholderia pseudomallei K96243 3095767 YP_110964.1 CDS BPSS0956 NC_006351.1 1258000 1258890 R Weakly similar to Salmonella typhimurium transcriptional regulator stm4417 SWALL:Q8ZK65 (EMBL:AE008907) (277 aa) fasta scores: E(): 3e-06, 20.75% id in 265 aa, and to Yersinia pestis hypothetical protein ypo2576 SWALL:Q8ZDJ0 (EMBL:AJ414152) (284 aa) fasta scores: E(): 1.1e-05, 22.84% id in 267 aa; hypothetical protein complement(1258000..1258890) Burkholderia pseudomallei K96243 3095513 YP_110965.1 CDS BPSS0957 NC_006351.1 1259881 1261092 R No significant database matches to the full length CDS. C-terminus is weakly similar to the C-terminal region of Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1016 or rs04262 SWALL:Q8Y0M7 (EMBL:AL646062) (523 aa) fasta scores: E(): 4.1, 25.14% id in 354 aa; hypothetical protein complement(1259881..1261092) Burkholderia pseudomallei K96243 3095514 YP_110966.1 CDS BPSS0958 NC_006351.1 1261382 1263367 D Similar to Pseudomonas aeruginosa hypothetical protein pa0091 SWALL:Q9I741 (EMBL:AE004447) (643 aa) fasta scores: E(): 1.4e-75, 37.03% id in 640 aa, and to the N-terminal region of Pseudomonas aeruginosa hypothetical protein pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 3e-79, 37.89% id in 636 aa; hypothetical protein 1261382..1263367 Burkholderia pseudomallei K96243 3095509 YP_110967.1 CDS BPSS0959 NC_006351.1 1263459 1263899 D Similar to Yersinia pestis hypothetical protein ypo3614 SWALL:Q8ZB15 (EMBL:AJ414158) (140 aa) fasta scores: E(): 2.2e-10, 30.88% id in 136 aa, and to Ralstonia solanacearum hypothetical protein rsp1138 or rs05481 SWALL:Q8XQT1 (EMBL:AL646083) (143 aa) fasta scores: E(): 1.2e-09, 26.61% id in 139 aa; hypothetical protein 1263459..1263899 Burkholderia pseudomallei K96243 3096496 YP_110968.1 CDS BPSS0960 NC_006351.1 1263951 1268576 D Similar to Ralstonia solanacearum Rhs-related transmembrane protein rsp1137 or rs05482 SWALL:Q8XQT2 (EMBL:AL646083) (1517 aa) fasta scores: E(): 1.2e-94, 34.74% id in 1557 aa. Internal region is similar to an internal region of Escherichia coli RhsD protein precursor SWALL:RHSD_ECOLI (SWALL:P16919) (1426 aa) fasta scores: E(): 1e-13, 28.1% id in 1000 aa; Rhs-related membrane protein 1263951..1268576 Burkholderia pseudomallei K96243 3096497 YP_110969.1 CDS BPSS0961 NC_006351.1 1268583 1269062 D hypothetical protein 1268583..1269062 Burkholderia pseudomallei K96243 3096672 YP_110970.1 CDS BPSS0962 NC_006351.1 1270105 1273500 D Weakly similar to Serratia marcescens extracellular serine protease precursor SWALL:PRTT_SERMA (SWALL:P29805) (1045 aa) fasta scores: E(): 2.8e-32, 29.08% id in 1193 aa, and to Pseudomonas fluorescens serine protease homologue PspB SWALL:Q9ZNI5 (EMBL:AB015053) (1036 aa) fasta scores: E(): 8.4e-71, 36.9% id in 1176 aa. Autotransporter protein; extracellular serine protease precursor 1270105..1273500 Burkholderia pseudomallei K96243 3095427 YP_110971.1 CDS BPSS0963 NC_006351.1 1273540 1274226 D hypothetical protein 1273540..1274226 Burkholderia pseudomallei K96243 3095428 YP_110972.1 CDS BPSS0964 NC_006351.1 1274424 1276016 R Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 3.4e-17, 26.19% id in 542 aa, and to Agrobacterium tumefaciens ABC transporter substrate binding protein ATU4431 or AGR_L_873 SWALL:Q8U7L8 (EMBL:AE009372) (545 aa) fasta scores: E(): 6.3e-65, 51.02% id in 535 aa. Similar to BPSS0954, 72.744% identity (73.019% ungapped) in 532 aa overlap; periplasmic solute-binding protein complement(1274424..1276016) Burkholderia pseudomallei K96243 3095768 YP_110973.1 CDS BPSS0965 NC_006351.1 1276302 1277564 D C-terminal region is similar to Bacillus subtilis oxalate decarboxylase OxdD SWALL:OXDD_BACSU (SWALL:O34767) (392 aa) fasta scores: E(): 3.5e-70, 51.09% id in 366 aa. Full legth CDS is similar to Agrobacterium tumefaciens oxalate decarboxylase ATU4771 or AGR_L_224 SWALL:Q8U6N6 (EMBL:AE009405) (415 aa) fasta scores: E(): 1e-106, 63.15% id in 418 aa; oxalate decarboxylase 1276302..1277564 Burkholderia pseudomallei K96243 3095557 YP_110974.1 CDS BPSS0966 NC_006351.1 1277697 1278992 D Similar to Escherichia coli manganese transport protein MntH SWALL:MNTH_ECOLI (SWALL:P77145) (412 aa) fasta scores: E(): 3.1e-65, 48.08% id in 391 aa, and to Deinococcus radiodurans probable manganese transport protein dr1709 SWALL:MNTH_DEIRA (SWALL:Q9RTP8) (436 aa) fasta scores: E(): 9.4e-74, 51.75% id in 398 aa; manganese transport protein 1277697..1278992 Burkholderia pseudomallei K96243 3095558 YP_110975.1 CDS BPSS0967 NC_006351.1 1279448 1279900 R Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0141 or rs01011 SWALL:Q8Y340 (EMBL:AL646057) (166 aa) fasta scores: E(): 9.8e-31, 70.31% id in 128 aa, and to Xanthomonas campestris membrane protein xcc3812 SWALL:AAM43486 (EMBL:AE012502) (144 aa) fasta scores: E(): 1.6e-30, 77.5% id in 120 aa; hypothetical protein complement(1279448..1279900) Burkholderia pseudomallei K96243 3096307 YP_110976.1 CDS BPSS0968 NC_006351.1 1280149 1281057 R Similar to Ralstonia solanacearum hypothetical protein rsc3414 or rs01793 SWALL:YY14_RALSO (SWALL:Q8XTY1) (306 aa) fasta scores: E(): 1.1e-50, 48.66% id in 300 aa, and to Salmonella typhi hypothetical protein sty1534 SWALL:YNEE_SALTI (SWALL:Q8Z706) (315 aa) fasta scores: E(): 3e-39, 43.1% id in 290 aa; hypothetical protein complement(1280149..1281057) Burkholderia pseudomallei K96243 3096965 YP_110977.1 CDS BPSS0969 NC_006351.1 1281070 1283394 R Similar to Ralstonia solanacearum formate dehydrogenase oxidoreductase rsp1048 or rs06130 SWALL:Q8XR20 (EMBL:AL646082) (779 aa) fasta scores: E(): 9e-208, 65.21% id in 756 aa, and to Ralstonia solanacearum formate dehydrogenase oxidoreductase rsp0070 or rs06105 SWALL:Q8XTN6 (EMBL:AL646076) (764 aa) fasta scores: E(): 4e-206, 64.81% id in 756 aa; molybdopterin oxidoreductase complement(1281070..1283394) Burkholderia pseudomallei K96243 3096966 YP_110978.1 CDS BPSS0970 NC_006351.1 1283573 1284991 D Similar to Pseudomonas aeruginosa hypothetical protein pa4132 SWALL:Q9HWP9 (EMBL:AE004829) (471 aa) fasta scores: E(): 2.7e-88, 51.82% id in 467 aa, and to Yersinia pestis similar to tyrosine aminotransferase ypo1960 SWALL:Q9ZC65 (EMBL:AL031866) (473 aa) fasta scores: E(): 7.2e-72, 42.45% id in 464 aa; GntR family transcriptional regulator 1283573..1284991 Burkholderia pseudomallei K96243 3096058 YP_110979.1 CDS BPSS0971 NC_006351.1 1285062 1285421 D DNA-binding protein 1285062..1285421 Burkholderia pseudomallei K96243 3095231 YP_110980.1 CDS BPSS0972 NC_006351.1 1285528 1286271 R Similar to Chlorobium tepidum hypothetical protein ct1745 SWALL:AAM72967 (EMBL:AE012928) (267 aa) fasta scores: E(): 1.1e-17, 33.85% id in 254 aa, and to Chlorobium tepidum hypothetical protein ct0395 SWALL:AAM71641 (EMBL:AE012816) (265 aa) fasta scores: E(): 1.3e-17, 38.72% id in 266 aa; hypothetical protein complement(1285528..1286271) Burkholderia pseudomallei K96243 3095232 YP_110981.1 CDS mgtB NC_006351.1 1286347 1289133 R Similar to Salmonella typhimurium Mg(2+) transport ATPase, P-type 2 MgtB SWALL:ATMB_SALTY (SWALL:P22036) (908 aa) fasta scores: E(): 1e-166, 60.02% id in 908 aa, and to Pseudomonas aeruginosa Mg(2+) transport ATPase, P-type 2 pa4825 SWALL:Q9HUY5 (EMBL:AE004895) (903 aa) fasta scores: E(): 5e-181, 64.78% id in 903 aa; Mg(2+) transport ATPase, P-type 2 complement(1286347..1289133) Burkholderia pseudomallei K96243 3095370 YP_110982.1 CDS BPSS0974 NC_006351.1 1289873 1291492 R No significant database matches to the full length CDS. C-teminal region is similar to an internal region of Bacteroides nodosus extracellular basic protease precursor BprV or Bpr SWALL:BPRV_BACNO (SWALL:P42779) (603 aa) fasta scores: E(): 8.9e-41, 39.94% id in 393 aa. C-terminal region is similar to Burkholderia pseudomallei serine metalloprotease precursor SWALL:Q9F881 (EMBL:AF254803) (500 aa) fasta scores: E(): 1.6e-71, 52.4% id in 500 aa. C-terminal region is similar to BPSS1993, 52.400% identity (54.132% ungapped) in 500 aa overlap; peptidase complement(1289873..1291492) Burkholderia pseudomallei K96243 3097149 YP_110983.1 CDS BPSS0975 NC_006351.1 1293047 1293562 D Similar to Pantoea citrea 2-keto-gluconate dehydrogenase subunit KdgA SWALL:Q9XCR1 (EMBL:AF131202) (189 aa) fasta scores: E(): 0.025, 31.28% id in 163 aa, and to Ralstonia solanacearum transmembrane dehydrogenase rsc0770 or rs05084 SWALL:Q8Y1C0 (EMBL:AL646061) (163 aa) fasta scores: E(): 2.1e-31, 59.39% id in 165 aa; hypothetical protein 1293047..1293562 Burkholderia pseudomallei K96243 3096900 YP_110984.1 CDS BPSS0976 NC_006351.1 1293562 1295175 D Similar to Pantoea citrea 2-keto-gluconate dehydrogenase subunit KdgB SWALL:Q9XCR0 (EMBL:AF131202) (553 aa) fasta scores: E(): 1.5e-89, 45.23% id in 535 aa, and to Ralstonia solanacearum transmembrane dehydrogenase rsc0771 or rs05083 SWALL:Q8Y1B9 (EMBL:AL646061) (539 aa) fasta scores: E(): 4.7e-179, 83.48% id in 539 aa; gluconate dehydrogenase subunit 1293562..1295175 Burkholderia pseudomallei K96243 3096901 YP_110985.1 CDS BPSS0977 NC_006351.1 1295220 1296533 D Similar to Pantoea agglomerans cytochrome c subunit II SWALL:Q9RH53 (EMBL:AF068066) (470 aa) fasta scores: E(): 2.6e-64, 47.29% id in 425 aa, and to Ralstonia solanacearum oxidoreductase dehydrogenase rsc0772 or rs05082 SWALL:Q8Y1B8 (EMBL:AL646061) (429 aa) fasta scores: E(): 1.9e-96, 62.91% id in 418 aa. Possible alternative translational start site; cytochrome c subunit II 1295220..1296533 Burkholderia pseudomallei K96243 3096638 YP_110986.1 CDS BPSS0978 NC_006351.1 1296725 1297138 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2500 or rs01095 SWALL:Q8XWH4 (EMBL:AL646070) (136 aa) fasta scores: E(): 3.6e-24, 53.54% id in 127 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein YphA or sf2590 SWALL:YPHA_ECOLI (SWALL:P77751) (140 aa) fasta scores: E(): 3.1e-23, 51.96% id in 127 aa; hypothetical protein 1296725..1297138 Burkholderia pseudomallei K96243 3095832 YP_110987.1 CDS BPSS0979 NC_006351.1 1297191 1298306 D Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.5e-11, 30.13% id in 365 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc2136 or rs01467 SWALL:Q8XXH8 (EMBL:AL646068) (352 aa) fasta scores: E(): 4.2e-38, 40.27% id in 370 aa; porin protein 1297191..1298306 Burkholderia pseudomallei K96243 3095833 YP_110988.1 CDS BPSS0980 NC_006351.1 1298505 1299308 R Similar to Clostridium acetobutylicum uncharacterized membrane protein cac0467 SWALL:Q97LT7 (EMBL:AE007561) (269 aa) fasta scores: E(): 9.4e-35, 38.49% id in 265 aa, and to Thermoanaerobacter tengcongensis hypothetical protein tte0750 SWALL:Q8RBR3 (EMBL:AE013042) (269 aa) fasta scores: E(): 1.2e-29, 35.84% id in 265 aa; hypothetical protein complement(1298505..1299308) Burkholderia pseudomallei K96243 3095066 YP_110989.1 CDS hisQ NC_006351.1 1299775 1300464 D Similar to Salmonella typhimurium, and Salmonella typhi histidine transport system permease HisQ SWALL:HISQ_SALTY (SWALL:P02913) (228 aa) fasta scores: E(): 1.5e-49, 62.44% id in 229 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2924 SWALL:Q9HZS3 (EMBL:AE004718) (229 aa) fasta scores: E(): 2.1e-55, 67.69% id in 226 aa. Similar to BPSL1032, 76.856% identity (76.856% ungapped) in 229 aa overlap, and to BPSL2394, 77.293% identity (77.293% ungapped) in 229 aa overlap; histidine transport system permease 1299775..1300464 Burkholderia pseudomallei K96243 3094969 YP_110990.1 CDS hisM NC_006351.1 1300461 1301174 D Similar to Salmonella typhimurium, and Salmonella typhi histidine transport system permease HisM SWALL:HISM_SALTY (SWALL:P02912) (235 aa) fasta scores: E(): 1.3e-56, 61.63% id in 232 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2925 SWALL:Q9HZS2 (EMBL:AE004718) (237 aa) fasta scores: E(): 1.1e-62, 64.97% id in 237 aa. Similar to BPSL1031, 74.153% identity (74.153% ungapped) in 236 aa overlap, and to BPSL2393, 67.511% identity (67.511% ungapped) in 237 aa overlap; histidine transport system permease 1300461..1301174 Burkholderia pseudomallei K96243 3095012 YP_110991.1 CDS hisP NC_006351.1 1301243 1302010 D Similar to Salmonella typhimurium histidine transport ATP-binding protein HisP SWALL:HISP_SALTY (SWALL:P02915) (258 aa) fasta scores: E(): 2.2e-61, 69.29% id in 254 aa, and to Pseudomonas aeruginosa histidine transport protein pa2926 SWALL:Q9HZS1 (EMBL:AE004718) (255 aa) fasta scores: E(): 6.5e-62, 71.37% id in 255 aa. Similar to BPSL2392, 78.656% identity (78.656% ungapped) in 253 aa overlap, and to BPSL1030, 78.125% identity (78.125% ungapped) in 256 aa overlap, and to BPSS1671, 51.460% identity (52.416% ungapped) in 274 aa overlap; histidine transport ATP-binding protein 1301243..1302010 Burkholderia pseudomallei K96243 3095049 YP_110992.1 CDS BPSS0984 NC_006351.1 1302075 1303376 R Similar to Escherichia coli, and Shigella flexneri UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA or MurZ SWALL:MURA_ECOLI (SWALL:P28909) (419 aa) fasta scores: E(): 3.9e-30, 31.79% id in 434 aa, and to Borrelia burgdorferi UDP-N-acetylglucosamine 1-carboxyvinyltransferase bb0472 SWALL:MURA_BORBU (SWALL:O51428) (427 aa) fasta scores: E(): 9.1e-49, 33.95% id in 430 aa; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(1302075..1303376) Burkholderia pseudomallei K96243 3096584 YP_110993.1 CDS BPSS0985 NC_006351.1 1303632 1304126 D Similar to Rhizobium loti hypothetical protein mlr0112 SWALL:Q98NJ4 (EMBL:AP002994) (132 aa) fasta scores: E(): 2.3e-13, 36.36% id in 132 aa, and to Rhizobium meliloti hypothetical protein r02006 or smc04177 SWALL:Q92K68 (EMBL:AL591789) (153 aa) fasta scores: E(): 1.4e-10, 32.72% id in 165 aa; hypothetical protein 1303632..1304126 Burkholderia pseudomallei K96243 3096585 YP_110994.1 CDS BPSS0986 NC_006351.1 1304382 1305131 D Weakly similar to Anabaena sp. hypothetical protein all3462 SWALL:Q8YRI4 (EMBL:AP003593) (260 aa) fasta scores: E(): 2.3, 24.32% id in 259 aa; hypothetical protein 1304382..1305131 Burkholderia pseudomallei K96243 3096469 YP_110995.1 CDS BPSS0987 NC_006351.1 1305249 1305593 R hypothetical protein complement(1305249..1305593) Burkholderia pseudomallei K96243 3095847 YP_110996.1 CDS BPSS0988 NC_006351.1 1306219 1307496 D Possible alternative translational start site. Similar to Bradyrhizobium japonicum inner membrane protein SpcT SWALL:Q9RH56 (EMBL:AF065159) (411 aa) fasta scores: E(): 1.2e-61, 51.97% id in 406 aa, and to Streptomyces spectabilis export protein SpcT SWALL:Q9L629 (EMBL:AF244574) (432 aa) fasta scores: E(): 3.2e-26, 31.02% id in 419 aa; hypothetical protein 1306219..1307496 Burkholderia pseudomallei K96243 3095848 YP_110997.1 CDS BPSS0989 NC_006351.1 1307541 1308083 R Poor database matches. Similar to Ralstonia solanacearum probable transmembrane protein rsp1154 or rs05433 SWALL:Q8XQR7 (EMBL:AL646083) (164 aa) fasta scores: E(): 0.053, 30.3% id in 165 aa; hypothetical protein complement(1307541..1308083) Burkholderia pseudomallei K96243 3096853 YP_110998.1 CDS BPSS0990 NC_006351.1 1308732 1309751 D Similar to Vibrio cholerae hypothetical protein vca0851 SWALL:Q9KL95 (EMBL:AE004413) (359 aa) fasta scores: E(): 5e-25, 34.92% id in 335 aa, and to an internal region of Ralstonia solanacearum transmembrane sensor histidine kinase transcription regulator protein rsc1351 or rs02874 SWALL:Q8XZP4 (EMBL:AL646064) (414 aa) fasta scores: E(): 2.2e-29, 37% id in 354 aa; histidine kinase 1308732..1309751 Burkholderia pseudomallei K96243 3096250 YP_110999.1 CDS katB NC_006351.1 1310767 1312284 D Similar to Pseudomonas aeruginosa catalase precursor KatB SWALL:CATB_PSEAE (SWALL:Q59635) (513 aa) fasta scores: E(): 7.5e-129, 65.6% id in 503 aa, and to Ralstonia solanacearum probable catalase hydroperoxidase HPII oxidoreductase rsp1581 or rs02137 SWALL:Q8XPQ7 (EMBL:AL646085) (509 aa) fasta scores: E(): 1.8e-155, 77.57% id in 504 aa; catalase precursor 1310767..1312284 Burkholderia pseudomallei K96243 3095083 YP_111000.1 CDS BPSS0994 NC_006351.1 1312677 1314146 R Similar to Synechocystis sp. hypothetical protein sll1526 SWALL:YF26_SYNY3 (SWALL:P74360) (506 aa) fasta scores: E(): 1.3e-39, 32.11% id in 439 aa, and to Caulobacter crescentus hypothetical protein cc3341 SWALL:Q9A365 (EMBL:AE005995) (528 aa) fasta scores: E(): 3.1e-27, 30.02% id in 473 aa. Possible alternative translational start site. CDS is truncated at the C-terminus in comparison to some similar proteins; hypothetical protein complement(1312677..1314146) Burkholderia pseudomallei K96243 3095065 YP_111001.1 CDS BPSS0995 NC_006351.1 1314324 1315883 R Similar to Ralstonia solanacearum regulatory protein HrpB SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 4.3e-42, 31.48% id in 486 aa, and to Burkholderia pseudomallei hypothetical protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 5.7e-61, 39.47% id in 494 aa. CDS is extended at the C-terminus in comparison to orthologues; AraC family transcriptional regulator complement(1314324..1315883) Burkholderia pseudomallei K96243 3096304 YP_111002.1 CDS BPSS0996 NC_006351.1 1316050 1317054 R N-terminus is similar to the N-terinal region of Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 1.5e-10, 27.44% id in 317 aa. Similar to an internal region to Rhodococcus erythropolis terminal oxygenase KshA SWALL:AAL96829 (EMBL:AY083508) (398 aa) fasta scores: E(): 4.3e-27, 31.57% id in 342 aa; Rieske iron-sulfur domain-containing protein complement(1316050..1317054) Burkholderia pseudomallei K96243 3096639 YP_111003.1 CDS BPSS0997 NC_006351.1 1317220 1318899 R Similar to Streptomyces coelicolor hypothetical protein SCO0642 or SCF91.02c SWALL:Q9RJC2 (EMBL:AL939106) (581 aa) fasta scores: E(): 4.3e-111, 50.61% id in 569 aa, and to Rhizobium loti hypothetical protein mll8338 SWALL:Q983G4 (EMBL:AP003013) (559 aa) fasta scores: E(): 4.1e-93, 42.15% id in 548 aa; hypothetical protein complement(1317220..1318899) Burkholderia pseudomallei K96243 3096640 YP_111004.1 CDS BPSS0998 NC_006351.1 1318941 1320185 R involved in polyketide production; polyketide beta-ketoacyl:acyl carrier protein synthase complement(1318941..1320185) Burkholderia pseudomallei K96243 3095101 YP_111005.1 CDS BPSS0999 NC_006351.1 1320172 1320411 R Acyl carrier proteins are involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; this ACP may be involved in the biosynthesis of lipopeptide antibiotics; acyl carrier protein complement(1320172..1320411) Burkholderia pseudomallei K96243 3095102 YP_111006.1 CDS BPSS1000 NC_006351.1 1320465 1321211 R involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase complement(1320465..1321211) Burkholderia pseudomallei K96243 3096724 YP_111007.1 CDS BPSS1001 NC_006351.1 1321248 1322018 R involved in polyketide synthesis; polyketide biosynthesis enoyl-CoA hydratase complement(1321248..1322018) Burkholderia pseudomallei K96243 3096344 YP_111008.1 CDS BPSS1002 NC_006351.1 1322012 1323271 R Similar to Myxococcus xanthus ACP synthase (KAS III) homologue Tac SWALL:Q9XB06 (EMBL:AJ132503) (420 aa) fasta scores: E(): 8.3e-121, 67.78% id in 419 aa, and to Yersinia pestis hydroxymethylglutaryl-coenzyme A synthase ypo1457 SWALL:Q8ZG58 (EMBL:AJ414148) (412 aa) fasta scores: E(): 2e-33, 32.78% id in 424 aa. Weakly similar to the N-terminal region of Gallus gallus cytoplasmic hydroxymethylglutaryl-CoA synthase HMGCS SWALL:HMCS_CHICK (SWALL:P23228) (522 aa) fasta scores: E(): 4.3e-05, 25.9% id in 471 aa; hydroxymethylglutaryl-coenzyme A synthase complement(1322012..1323271) Burkholderia pseudomallei K96243 3096345 YP_111009.1 CDS BPSS1003 NC_006351.1 1323383 1323721 R hypothetical protein complement(1323383..1323721) Burkholderia pseudomallei K96243 3096971 YP_111010.1 CDS BPSS1004 NC_006351.1 1324682 1325866 R C-terminal region is similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase FabD or TfpA SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 1.2e-21, 35.4% id in 305 aa, and to Bacillus subtilis PksC protein SWALL:O34825 (EMBL:Z99112) (288 aa) fasta scores: E(): 3.7e-43, 51.38% id in 288 aa; acyl transferase complement(1324682..1325866) Burkholderia pseudomallei K96243 3095813 YP_111011.1 CDS BPSS1005 NC_006351.1 1326251 1327483 R Similar to Streptomyces lavendulae integral membrane ion antiporter SWALL:Q93N84 (EMBL:AF386507) (425 aa) fasta scores: E(): 2.2e-34, 34.35% id in 393 aa, and to Xanthomonas axonopodis Na+/H+-exchanging protein yjl094c or xac0254 SWALL:AAM35146 (EMBL:AE011650) (419 aa) fasta scores: E(): 5.8e-29, 32.62% id in 423 aa; sodium/hydrogen exchanger family protein complement(1326251..1327483) Burkholderia pseudomallei K96243 3095814 YP_111012.1 CDS BPSS1006 NC_006351.1 1328091 1341815 D C-terminal region is similar to the C-terminal regions of Bacillus subtilis polyketide synthase PksL or PksX or PksA or OutG SWALL:PKSL_BACSU (SWALL:Q05470) (4427 aa) fasta scores: E(): 3.8e-88, 26.92% id in 4427 aa, and to Pseudomonas fluorescens MmpIV protein SWALL:Q8RL72 (EMBL:AF318063) (6521 aa) fasta scores: E(): 1.7e-78, 28.45% id in 4608 aa; polyketide synthase 1328091..1341815 Burkholderia pseudomallei K96243 3096968 YP_111013.1 CDS BPSS1007 NC_006351.1 1341949 1359456 D Internal region is similar to the C-terminal region of Bacillus subtilis polyketide synthase PksL or PksX or PksA or OutG SWALL:PKSL_BACSU (SWALL:Q05470) (4427 aa) fasta scores: E(): 5.7e-96, 33.1% id in 4951 aa, and to the N-terminal region of Streptomyces natalensis polyketide synthase PimS1 SWALL:Q9X993 (EMBL:AJ132222) (6797 aa) fasta scores: E(): 2.2e-79, 28.67% id in 5797 aa; polyketide synthase 1341949..1359456 Burkholderia pseudomallei K96243 3096857 YP_111014.1 CDS BPSS1008 NC_006351.1 1359453 1374659 D N-terminal region is similar to the the N-terminal region of Bacillus subtilis polyketide synthase PksK SWALL:PKSK_BACSU (SWALL:P40803) (4447 aa) fasta scores: E(): 1.1e-167, 38.79% id in 3439 aa. Internal region is similar to an internal region of Pseudomonas fluorescens MmpIV protein SWALL:Q8RL72 (EMBL:AF318063) (6521 aa) fasta scores: E(): 2.8e-41, 32.83% id in 4069 aa; polyketide synthase 1359453..1374659 Burkholderia pseudomallei K96243 3096858 YP_111015.1 CDS BPSS1009 NC_006351.1 1374643 1379331 D C-terminal region is similar to an internal region of Bacillus subtilis polyketide synthase Pksl or PksX or PksA or OutG SWALL:PKSL_BACSU (SWALL:Q05470) (4427 aa) fasta scores: E(): 3.4e-65, 39.49% id in 633 aa, and to Pseudomonas fluorescens MmpII protein SWALL:Q8RL74 (EMBL:AF318063) (2076 aa) fasta scores: E(): 6.5e-62, 38.92% id in 632 aa; polyketide synthase 1374643..1379331 Burkholderia pseudomallei K96243 3095510 YP_111016.1 CDS BPSS1010 NC_006351.1 1379351 1381072 D Similar to Pseudomonas fluorescens halogenase PrnC SWALL:P95482 (EMBL:U74493) (567 aa) fasta scores: E(): 9.7e-91, 43.42% id in 555 aa, and to Burkholderia cepacia PrnC SWALL:Q9RPG5 (EMBL:AF161183) (566 aa) fasta scores: E(): 1.1e-89, 44.99% id in 549 aa; halogenase 1379351..1381072 Burkholderia pseudomallei K96243 3096636 YP_111017.1 CDS BPSS1011 NC_006351.1 1381149 1382591 D Similar to Streptomyces lipmanii puromycin resistance protein Pur8 SWALL:PUR8_STRLP (SWALL:P42670) (503 aa) fasta scores: E(): 8.1e-50, 39.73% id in 453 aa, and to Nocardia aerocolonigenes antibiotic antiporter RbmK or RebI SWALL:CAC93723 (EMBL:AF534707) (473 aa) fasta scores: E(): 1.6e-57, 43.76% id in 473 aa, and to Streptomyces coelicolor transmembrane transport protein sco2309 or scc30.17C SWALL:Q9L004 (EMBL:AL939112) (489 aa) fasta scores: E(): 5.5e-55, 41.22% id in 473 aa, and to Streptomyces roseofulvus antibiotic antiporter FrnF SWALL:O68912 (EMBL:AF058302) (517 aa) fasta scores: E(): 7.4e-55, 42.15% id in 465 aa; transmembrane transport protein 1381149..1382591 Burkholderia pseudomallei K96243 3096637 YP_111018.1 CDS BPSS1012 NC_006351.1 1383248 1385152 R Similar to Salmonella typhimurium voltage-gated clc-type chloride channel EriC or stm0203 SWALL:ERIC_SALTY (SWALL:Q8ZRP8) (473 aa) fasta scores: E(): 1.3e-18, 27.84% id in 431 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2431 or rs02676 SWALL:Q8XWP2 (EMBL:AL646070) (599 aa) fasta scores: E(): 4.4e-131, 68.8% id in 625 aa, and to Rhizobium loti chloride channel protein mll1477 SWALL:Q98KH1 (EMBL:AP002997) (612 aa) fasta scores: E(): 7.8e-90, 54.41% id in 487 aa; voltage-gated clc-type chloride channel complement(1383248..1385152) Burkholderia pseudomallei K96243 3096946 YP_111019.1 CDS BPSS1013 NC_006351.1 1385187 1385600 R Similar to Ralstonia solanacearum transcription regulator protein rsc2430 or rs02662 SWALL:Q8XWP3 (EMBL:AL646070) (139 aa) fasta scores: E(): 4.6e-30, 63.7% id in 135 aa, and to Rhizobium loti probable transcriptional regulator mlr1478 SWALL:Q98KH0 (EMBL:AP002997) (148 aa) fasta scores: E(): 1.6e-13, 44.8% id in 125 aa; hypothetical protein complement(1385187..1385600) Burkholderia pseudomallei K96243 3095210 YP_111020.1 CDS BPSS1014 NC_006351.1 1385741 1386934 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0130 or rs01000 SWALL:Q8Y351 (EMBL:AL646057) (378 aa) fasta scores: E(): 7.7e-62, 58.61% id in 389 aa, and to Agrobacterium tumefaciens hypothetical protein atu1509 or agr_c_2783 SWALL:Q8UF90 (EMBL:AE009110) (382 aa) fasta scores: E(): 3.5e-50, 45.23% id in 378 aa, and to Pseudomonas stutzeri Orf378 protein SWALL:P95554 (EMBL:Z73914) (378 aa) fasta scores: E(): 1.5e-40, 40.21% id in 378 aa; hypothetical protein complement(1385741..1386934) Burkholderia pseudomallei K96243 3095211 YP_111021.1 CDS BPSS1015 NC_006351.1 1387287 1388258 D Similar to Pseudomonas putida transcriptional regulator, lysR family pp1262 SWALL:AAN66886 (EMBL:AE016778) (315 aa) fasta scores: E(): 7e-57, 51.29% id in 308 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3895 SWALL:Q9HXB8 (EMBL:AE004807) (317 aa) fasta scores: E(): 7.8e-56, 49.68% id in 316 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0876 SWALL:Q9I569 (EMBL:AE004522) (314 aa) fasta scores: E(): 2.4e-52, 49.68% id in 314 aa; LysR family transcriptional regulator 1387287..1388258 Burkholderia pseudomallei K96243 3095451 YP_111022.1 CDS BPSS1016 NC_006351.1 1388785 1389927 R Similar to Escherichia coli calcium/proton antiporter ChaA or b1216 SWALL:CHAA_ECOLI (SWALL:P31801) (366 aa) fasta scores: E(): 3.3e-38, 37.89% id in 351 aa, and to Streptomyces coelicolor ionic transporter sco1962 or scc54.22C SWALL:Q9Z504 (EMBL:AL939110) (366 aa) fasta scores: E(): 1.7e-65, 57.26% id in 358 aa, and to Mycobacterium tuberculosis ionic transporter ChaA or rv1607 or mtv046.05 or mt1642 SWALL:O53910 (EMBL:AL022001) (360 aa) fasta scores: E(): 2.8e-63, 56.33% id in 355 aa; ionic antiporter complement(1388785..1389927) Burkholderia pseudomallei K96243 3097254 YP_111023.1 CDS BPSS1017 NC_006351.1 1390598 1391386 D Similar to Escherichia coli multiple antibiotic resistance protein MarC or b1529 SWALL:MARC_ECOLI (SWALL:P31123) (221 aa) fasta scores: E(): 2.5e-15, 29.03% id in 217 aa, and to Caulobacter crescentus hypothetical protein Cc1662 SWALL:Q9A7Q8 (EMBL:AE005841) (228 aa) fasta scores: E(): 4.7e-25, 39.33% id in 211 aa, and to Bordetella pertussis multiple antibiotic resistance protein maR SWALL:Q9X6A6 (EMBL:AF135154) (132 aa) fasta scores: E(): 9.7e-18, 61.29% id in 93 aa; possible alternative start site at codon 42; antibiotic resistance protein 1390598..1391386 Burkholderia pseudomallei K96243 3097255 YP_111024.1 CDS BPSS1018 NC_006351.1 1391733 1392641 R Similar to Pseudomonas aeruginosa hypothetical protein Pa5132 SWALL:Q9HU52 (EMBL:AE004926) (272 aa) fasta scores: E(): 3.3e-25, 43.01% id in 279 aa, and to Yersinia pestis membrane protein ypo1140 SWALL:Q8ZGY1 (EMBL:AJ414146) (272 aa) fasta scores: E(): 1.1e-22, 38.48% id in 278 aa, and to Vibrio cholerae hypothetical protein Vc1074 SWALL:Q9KT31 (EMBL:AE004189) (276 aa) fasta scores: E(): 1.3e-22, 37.4% id in 278 aa. Possible alternative translational start.; hypothetical protein complement(1391733..1392641) Burkholderia pseudomallei K96243 3096729 YP_111025.1 CDS BPSS1019 NC_006351.1 1392817 1393521 R Similar to Ralstonia sp. U2 fumarylpyruvate hydrolase nagK SWALL:O86042 (EMBL:AF036940) (192 aa) fasta scores: E(): 3.5e-23, 40.2% id in 194 aa, and to Rhizobium loti hypothetical protein Mlr1134 mlr1134 SWALL:Q98L86 (EMBL:AP002996) (232 aa) fasta scores: E(): 1.4e-57, 63.04% id in 230 aa, and to Ralstonia solanacearum hypothetical protein rsc0383 rsc0383 or rs03351 SWALL:Q8Y2F3 (EMBL:AL646059) (233 aa) fasta scores: E(): 1.2e-48, 55.6% id in 232 aa; fumarylpyruvate hydrolase complement(1392817..1393521) Burkholderia pseudomallei K96243 3095995 YP_111026.1 CDS BPSS1020 NC_006351.1 1393691 1394737 R Similar to Bacillus sp. GL1 protein Orf1 SWALL:Q9RC93 (EMBL:AB019619) (297 aa) fasta scores: E(): 8.1e-06, 27.88% id in 269 aa, to codon 279 and to Streptococcus pyogenes two-component response regulator Spy1556 SWALL:Q99YT2 (EMBL:AE006588) (246 aa) fasta scores: E(): 4.3e-07, 40.2% id in 97 aa, from codon 209 to codon 301 and to Citrobacter freundii arabinose operon regulatory protein araC SWALL:ARAC_CITFR (SWALL:P11765) (281 aa) fasta scores: E(): 6.3e-07, 38.23% id in 102 aa from codon 194 to codon 296; AraC family transcriptional regulator complement(1393691..1394737) Burkholderia pseudomallei K96243 3095996 YP_111027.1 CDS BPSS1021 NC_006351.1 1395387 1395545 D Weakly similar to the N-terminal region Pseudomonas putida conserved hypothetical protein pp2172 SWALL:Q88KW7 (EMBL:AE016782) (147 aa) fasta scores: E(): 1.8, 53.48% id in 43 aa, and to Rhizobium meliloti hypothetical lipoprotein transmembrane r01981 or smc04335 SWALL:Q92K72 (EMBL:AL591789) (57 aa) fasta scores: E(): 7.1, 43.18% id in 44 aa; lipoprotein 1395387..1395545 Burkholderia pseudomallei K96243 3096609 YP_111028.1 CDS BPSS1022 NC_006351.1 1395561 1396082 D Similar to Rhizobium leguminosarum extracytoplasmic sigma factor EcfR SWALL:Q9X5V5 (EMBL:AF127795) (186 aa) fasta scores: E(): 2.1e-22, 48.64% id in 148 aa, and to Bradyrhizobium japonicum sigma factor EcfA SWALL:Q9EXR8 (EMBL:AJ304855) (172 aa) fasta scores: E(): 6.5e-22, 52.41% id in 166 aa, and to Rhizobium loti RNA polymerase sigma factor mlr0407 SWALL:Q98MW7 (EMBL:AP002994) (183 aa) fasta scores: E(): 3.6e-21, 45.86% id in 157 aa; RNA polymerase sigma factor 1395561..1396082 Burkholderia pseudomallei K96243 3094915 YP_111029.1 CDS BPSS1023 NC_006351.1 1396079 1396903 D Similar to Agrobacterium tumefaciens transcriptional regulator PrtR or atu1484 or agr_c_2736 SWALL:Q8UFB4 (EMBL:AE009107) (258 aa) fasta scores: E(): 7.5e-16, 34.83% id in 267 aa, and to Agrobacterium tumefaciens hypothetical protein atu2031 or agr_c_3680 SWALL:Q8UDT8 (EMBL:AE009154) (262 aa) fasta scores: E(): 2.3e-15, 32.53% id in 249 aa, and to Rhizobium loti hypothetical protein Mlr7774 SWALL:Q984Z9 (EMBL:AP003012) (263 aa) fasta scores: E(): 1e-14, 32.28% id in 254 aa; hypothetical protein 1396079..1396903 Burkholderia pseudomallei K96243 3094916 YP_111030.1 CDS BPSS1024 NC_006351.1 1397146 1397958 D Similar to Caulobacter crescentus hypothetical protein Cc2609 SWALL:Q9A555 (EMBL:AE005928) (230 aa) fasta scores: E(): 9.1e-08, 34.61% id in 156 aa, and to Caulobacter crescentus hypothetical protein Cc3392 SWALL:Q9A314 (EMBL:AE005999) (213 aa) fasta scores: E(): 3.3e-06, 30.35% id in 168 aa, and to Streptomyces coelicolor hypothetical protein sco2566 or scc123.04C SWALL:Q9RDM0 (EMBL:AL939113) (293 aa) fasta scores: E(): 3.8e-06, 30.34% id in 145 aa; hypothetical protein 1397146..1397958 Burkholderia pseudomallei K96243 3096718 YP_111031.1 CDS BPSS1025 NC_006351.1 1397998 1398357 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2984 or rs01242 SWALL:Q8XV47 (EMBL:AL646073) (148 aa) fasta scores: E(): 1.5e-18, 54.63% id in 97 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5359 SWALL:Q9HTJ9 (EMBL:AE004947) (151 aa) fasta scores: E(): 5.5e-16, 45.76% id in 118 aa, and to Pseudomonas syringae pv. maculicola hypothetical 13.4 kDa protein SWALL:Q93TD7 (EMBL:AF359557) (126 aa) fasta scores: E(): 6.3e-16, 45.52% id in 123 aa; lipoprotein 1397998..1398357 Burkholderia pseudomallei K96243 3095259 YP_111032.1 CDS BPSS1026 NC_006351.1 1398354 1398581 D hypothetical protein 1398354..1398581 Burkholderia pseudomallei K96243 3095260 YP_111033.1 CDS BPSS1027 NC_006351.1 1398855 1399364 D Similar to Escherichia coli probable RNA polymerase sigma factor FecI or b4293 SWALL:FECI_ECOLI (SWALL:P23484) (173 aa) fasta scores: E(): 1.2e-23, 47.33% id in 150 aa, and to Pseudomonas aeruginosa RNA polymerase sigma factor pa3899 SWALL:Q9HXB4 (EMBL:AE004807) (169 aa) fasta scores: E(): 2.6e-33, 53.61% id in 166 aa, and to Pseudomonas aeruginosa RNA polymerase sigma factor pa1912 SWALL:Q9I2J2 (EMBL:AE004617) (168 aa) fasta scores: E(): 1.3e-30, 53.98% id in 163 aa, and to Bordetella avium RhuI rhuI SWALL:AAM28266 (EMBL:AY095952) (168 aa) fasta scores: E(): 5.7e-27, 48.76% id in 162 aa; RNA polymerase sigma factor 1398855..1399364 Burkholderia pseudomallei K96243 3095415 YP_111034.1 CDS BPSS1028 NC_006351.1 1399361 1400365 D Similar to Escherichia coli protein iron uptake sensor regulator FecR or b4292 SWALL:FECR_ECOLI (SWALL:P23485) (317 aa) fasta scores: E(): 1.3e-25, 35.04% id in 311 aa, and to Pseudomonas aeruginosa probable transmembrane sensor pa2467 SWALL:Q9I115 (EMBL:AE004674) (328 aa) fasta scores: E(): 8.7e-42, 44.09% id in 322 aa; iron uptake regulator protein 1399361..1400365 Burkholderia pseudomallei K96243 3096782 YP_111035.1 CDS BPSS1029 NC_006351.1 1400693 1403158 D Similar to Pseudomonas putida ferric-pseudobactin bn7/bn8 receptor precursor PupB SWALL:PUPB_PSEPU (SWALL:P38047) (809 aa) fasta scores: E(): 1e-32, 26.81% id in 839 aa, and to Pseudomonas aeruginosa probable tonB-dependent receptor pa0151 SWALL:Q9I6Y1 (EMBL:AE004453) (795 aa) fasta scores: E(): 1e-155, 56.5% id in 807 aa, from codon 140 to 822 and to Yersinia pestis hydroxamate-type ferrisiderophore receptor ypo0956 SWALL:Q8ZHE4 (EMBL:AJ414145) (699 aa) fasta scores: E(): 7.2e-110, 45.76% id in 684 aa, and to Escherichia coli O157:H7 iron compound receptor z4386 or ecs3917 SWALL:Q8XBQ5 (EMBL:AE005533) (713 aa) fasta scores: E(): 6.6e-96, 42.67% id in 703 aa, from codon 124 to 822; TonB-dependent receptor family protein 1400693..1403158 Burkholderia pseudomallei K96243 3096783 YP_111036.1 CDS BPSS1030 NC_006351.1 1403370 1404350 R Similar to Bacillus subtilis ribose transport system permease RbsC SWALL:RBSC_BACSU (SWALL:P36948) (322 aa) fasta scores: E(): 1.8e-18, 30.46% id in 302 aa, and to Bacillus halodurans ribose ABC transporter RbsC or bh3731 SWALL:Q9K6J8 (EMBL:AP001519) (314 aa) fasta scores: E(): 1e-20, 30.54% id in 311 aa, and to Thermotoga maritima ribose ABC transporter permease tm0955 SWALL:Q9X050 (EMBL:AE001758) (331 aa) fasta scores: E(): 1.6e-20, 33.02% id in 321 aa; sugar transport system permease complement(1403370..1404350) Burkholderia pseudomallei K96243 3095817 YP_111037.1 CDS BPSS1031 NC_006351.1 1404343 1405428 R Similar to Bacillus subtilis ribose transport system permease RbsC SWALL:RBSC_BACSU (SWALL:P36948) (322 aa) fasta scores: E(): 5.2e-23, 35.23% id in 315 aa, and to Rhizobium loti permease of ribose ABC transporter mll2145 SWALL:Q98J21 (EMBL:AP002999) (338 aa) fasta scores: E(): 1e-22, 33.83% id in 334 aa, and to Streptomyces coelicolor bifunctional carbohydrate binding and transport protein sco2747 or scc57a.18 SWALL:Q9RDI0 (EMBL:AL939113) (651 aa) fasta scores: E(): 1.1e-21, 35.54% id in 332 aa; possible alternative start site at codon 30; transmembrane sugar transport protein complement(1404343..1405428) Burkholderia pseudomallei K96243 3096406 YP_111038.1 CDS BPSS1032 NC_006351.1 1405425 1407239 R Similar to Bacillus subtilis ribose transport ATP-binding protein RbsA SWALL:RBSA_BACSU (SWALL:P36947) (493 aa) fasta scores: E(): 7.5e-23, 35.76% id in 548 aa, and to Thermotoga maritima sugar ABC transporter ATP-binding protein tm0115 SWALL:Q9WXX0 (EMBL:AE001697) (520 aa) fasta scores: E(): 2.2e-22, 35.59% id in 545 aa, and to Rhizobium meliloti ATP-binding ABC transporter protein r02565 or smc02337 SWALL:Q92MP8 (EMBL:AL591791) (501 aa) fasta scores: E(): 2.4e-22, 38.63% id in 541 aa; sugar ABC transporter ATP-binding component complement(1405425..1407239) Burkholderia pseudomallei K96243 3096407 YP_111039.1 CDS BPSS1033 NC_006351.1 1407236 1408285 R Similar to Bacillus subtilis D-ribose-binding protein precursor RbsB SWALL:RBSB_BACSU (SWALL:P36949) (305 aa) fasta scores: E(): 2e-08, 24.02% id in 308 aa, and to Pseudomonas putida sugar-binding protein, pp2757 SWALL:AAN68365 (EMBL:AE016784) (323 aa) fasta scores: E(): 3.6e-61, 57.14% id in 322 aa, and to Pseudomonas putida ribose ABC transporter periplasmic ribose-binding protein, pp2758 SWALL:AAN68366 (EMBL:AE016784) (342 aa) fasta scores: E(): 2.3e-60, 57.79% id in 308 aa, and to Yersinia pestis ABC transporter binding protein y2651 SWALL:AAM86204 (EMBL:AE013867) (363 aa) fasta scores: E(): 7.6e-14, 29.03% id in 341 aa; ABC periplasmic-binding sugar transport protein complement(1407236..1408285) Burkholderia pseudomallei K96243 3095593 YP_111040.1 CDS BPSS1034 NC_006351.1 1408916 1409656 D Similar to Rhizobium loti hypothetical protein Mll1752 SWALL:Q98JW1 (EMBL:AP002998) (178 aa) fasta scores: E(): 2.7e-22, 42.44% id in 172 aa, and to Rhizobium loti nickel-cobalt-cadmium resistance protein mlr6490 SWALL:Q989C1 (EMBL:AP003009) (176 aa) fasta scores: E(): 3e-06, 30.95% id in 168 aa, and to Sulfolobus tokodaii hypothetical protein St1187 SWALL:Q972E1 (EMBL:AP000985) (199 aa) fasta scores: E(): 7.1e-06, 29.65% id in 145 aa; hypothetical protein 1408916..1409656 Burkholderia pseudomallei K96243 3096169 YP_111041.1 CDS BPSS1035 NC_006351.1 1410001 1410252 R hypothetical protein complement(1410001..1410252) Burkholderia pseudomallei K96243 3096170 YP_111042.1 CDS BPSS1036 NC_006351.1 1410415 1411674 R Similar to Paenibacillus sp. A11-2 thermophilic dibenzothiophene desulfurization enzyme C TdsC SWALL:Q9LBX2 (EMBL:AB033997) (414 aa) fasta scores: E(): 1.1e-11, 29.11% id in 419 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2324 SWALL:Q9I1F4 (EMBL:AE004658) (419 aa) fasta scores: E(): 3.5e-105, 68.21% id in 409 aa, and to Xanthomonas axonopodis hypothetical protein Xac0854 SWALL:AAM35742 (EMBL:AE011717) (434 aa) fasta scores: E(): 3.7e-64, 48.41% id in 411 aa; acyl-CoA dehydrogenase complement(1410415..1411674) Burkholderia pseudomallei K96243 3096904 YP_111043.1 CDS BPSS1037 NC_006351.1 1411894 1413363 R Similar to Bacillus subtilis arabinose-proton symporter AraE SWALL:ARAE_BACSU (SWALL:P96710) (464 aa) fasta scores: E(): 7.5e-19, 26.56% id in 463 aa, and to Thermoplasma acidophilum sugar transport protein related protein ta0775 SWALL:Q9HK33 (EMBL:AL445065) (474 aa) fasta scores: E(): 5e-25, 28.31% id in 452 aa, and to Sulfolobus solfataricus metabolite transport protein, sso3120 SWALL:Q97U99 (EMBL:AE006902) (483 aa) fasta scores: E(): 1e-24, 30.04% id in 406 aa; sugar transport protein complement(1411894..1413363) Burkholderia pseudomallei K96243 3096531 YP_111044.1 CDS BPSS1038 NC_006351.1 1414651 1414923 D hypothetical protein 1414651..1414923 Burkholderia pseudomallei K96243 3096532 YP_111045.1 CDS irlS NC_006351.1 1415018 1416412 R Almost identical to Burkholderia pseudomallei sensor protein IrlS SWALL:IRLS_BURPS (SWALL:O31396) (464 aa) fasta scores: E(): 6.7e-167, 99.56% id in 464 aa. Similar to and to Ralstonia solanacearum probable transmembrane sensory transduction histidine kinase for cobalt-zinc-cadmium resistance transcription regulator protein CzcS or rsp0488 or rs00366 SWALL:Q8XSI6 (EMBL:AL646079) (465 aa) fasta scores: E(): 6.8e-48, 38.17% id in 461 aa, and to Pseudomonas fluorescens CztS SWALL:Q9ALR1 (EMBL:AY007258) (478 aa) fasta scores: E(): 4.5e-42, 34.64% id in 456 aa. Probably activates partner IrlR by phosphorylation; transmembrane invasion-related two-component sensor protein complement(1415018..1416412) Burkholderia pseudomallei K96243 3096238 YP_111046.1 CDS irlR NC_006351.1 1416409 1417098 R Almost identical to the previously sequenced Burkholderia pseudomallei transcriptional activator protein IrlR SWALL:IRLR_BURPS (SWALL:O31395) (229 aa) fasta scores: E(): 1.2e-90, 99.56% id in 229 aa. Probably activated following phosphorylation by IrlS. Similar to Ralstonia solanacearum probable response regulator for cobalt zinc cadmium resistance transcription regulator protein CzcR or rsp0489 or rs00367 SWALL:Q8XSI5 (EMBL:AL646079) (224 aa) fasta scores: E(): 2.8e-58, 67.72% id in 220 aa, and to Pseudomonas aeruginosa two-component response regulator IrlR or pa4885 SWALL:Q9HUS8 (EMBL:AE004901) (229 aa) fasta scores: E(): 7.1e-58, 63.06% id in 222 aa; transcriptional activator protein complement(1416409..1417098) Burkholderia pseudomallei K96243 3094904 YP_111047.1 CDS czcA NC_006351.1 1417105 1420338 R Similar to Alcaligenes sp. cation efflux system protein CzcA SWALL:CZCA_ALCSP (SWALL:P94177) (1063 aa) fasta scores: E(): 0, 73.37% id in 1044 aa, and to Alcaligenes eutrophus cobalt-zinc-cadmium resistance protein CzcA SWALL:CZCA_ALCEU (SWALL:P13511) (1063 aa) fasta scores: E(): 0, 73.08% id in 1044 aa, and to Ralstonia solanacearum probable cation efflux system transmembrane protein CzcA or rsp0493 or rs00371 SWALL:Q8XSI1 (EMBL:AL646079) (1064 aa) fasta scores: E(): 0, 72.42% id in 1059 aa, and to Pseudomonas fluorescens CztA SWALL:Q9ALR2 (EMBL:AY007258) (1051 aa) fasta scores: E(): 0, 70.97% id in 1044 aa; cation efflux system protein complement(1417105..1420338) Burkholderia pseudomallei K96243 3096586 YP_111048.1 CDS czcB NC_006351.1 1420384 1421853 R Similar to Alcaligenes eutrophus cobalt-zinc-cadmium resistance protein CzcB SWALL:CZCB_ALCEU (SWALL:P13510) (520 aa) fasta scores: E(): 3.3e-73, 53.04% id in 443 aa, and to Alcaligenes sp. cation efflux system protein CzcB SWALL:CZCB_ALCSP (SWALL:P94176) (520 aa) fasta scores: E(): 1e-72, 52.59% id in 443 aa, and to Pseudomonas aeruginosa RND divalent metal cation efflux membrane fusion protein czcb precursor czcb or pa2521 SWALL:Q9I0W1 (EMBL:AE004679) (484 aa) fasta scores: E(): 1.1e-62, 45.3% id in 490 aa, and to Ralstonia solanacearum probable cobalt-zinc-cadmium resistance CzcB or rsp0492 or rs00370 SWALL:Q8XSI2 (EMBL:AL646079) (404 aa) fasta scores: E(): 1.9e-56, 50.62% id in 403 aa; cobalt-zinc-cadmium resistance protein complement(1420384..1421853) Burkholderia pseudomallei K96243 3096565 YP_111049.1 CDS czcC NC_006351.1 1421864 1423222 R Similar to Alcaligenes eutrophus cobalt-zinc-cadmium resistance protein CzcC precursor SWALL:CZCC_ALCEU (SWALL:P13509) (417 aa) fasta scores: E(): 4.7e-34, 39.75% id in 415 aa, and to Alcaligenes sp CzcC SWALL:P94175 (EMBL:D67044) (417 aa) fasta scores: E(): 1.5e-37, 41.3% id in 414 aa, and to Ralstonia solanacearum probable cobalt-zinc-cadmium outer membrane resistance protein CzcC or rsp0491 or rs00369 SWALL:Q8XSI3 (EMBL:AL646079) (441 aa) fasta scores: E(): 4.3e-36, 42.92% id in 424 aa; cobalt-zinc-cadmium resistance protein complement(1421864..1423222) Burkholderia pseudomallei K96243 3096566 YP_111050.1 CDS BPSS1044 NC_006351.1 1424167 1424307 R Similar to Bacteriophage phiE125 gp48 SWALL:Q8W6Q2 (EMBL:AF447491) (43 aa) fasta scores: E(): 1.1e-05, 58.69% id in 46 aa; bacteriophage protein complement(1424167..1424307) Burkholderia pseudomallei K96243 3096646 YP_111051.1 CDS BPSS1045 NC_006351.1 1424960 1425448 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0419 or rs03387 SWALL:Q8Y2B7 (EMBL:AL646059) (161 aa) fasta scores: E(): 2.1e-48, 75.62% id in 160 aa, and to Mycobacterium tuberculosis hypothetical protein rv3735 rv3735 or mt3840 or mtv025.083 SWALL:O69702 (EMBL:AL022121) (165 aa) fasta scores: E(): 2.2e-40, 64.51% id in 155 aa, and to Sulfolobus tokodaii hypothetical protein St1511 st1511 SWALL:Q970U0 (EMBL:AP000986) (162 aa) fasta scores: E(): 1.4e-33, 55.48% id in 155 aa; hypothetical protein complement(1424960..1425448) Burkholderia pseudomallei K96243 3095670 YP_111052.1 CDS BPSS1046 NC_006351.1 1425780 1426265 D Similar to Ralstonia solanacearum hypothetical protein rsc2911 or rs00184 SWALL:Q8XVC0 (EMBL:AL646072) (162 aa) fasta scores: E(): 1.3e-38, 63.35% id in 161 aa, and to Rhizobium meliloti hypothetical protein r00461 or smc01705 SWALL:Q92SE2 (EMBL:AL591783) (156 aa) fasta scores: E(): 4.5e-22, 44.8% id in 154 aa, and to Rhizobium loti hypothetical protein Mlr1045 SWALL:Q98LF3 (EMBL:AP002996) (157 aa) fasta scores: E(): 6.8e-20, 38.71% id in 155 aa, and to Chlorobium tepidum hypothetical protein Ct1883 SWALL:AAM73102 (EMBL:AE012939) (155 aa) fasta scores: E(): 9.8e-11, 32.85% id in 140 aa; hypothetical protein 1425780..1426265 Burkholderia pseudomallei K96243 3095671 YP_111053.1 CDS BPSS1047 NC_006351.1 1426470 1426808 R Limited similarity to Neisseria meningitidis hypothetical 13.0 kDa protein SWALL:Q9F403 (EMBL:AJ277475) (109 aa) fasta scores: E(): 0.0091, 32.46% id in 77 aa; hypothetical protein complement(1426470..1426808) Burkholderia pseudomallei K96243 3096043 YP_111054.1 CDS BPSS1047a NC_006351.1 1427049 1427201 D hypothetical protein 1427049..1427201 Burkholderia pseudomallei K96243 3095639 YP_111055.1 CDS BPSS1048 NC_006351.1 1427189 1427971 D hypothetical protein 1427189..1427971 Burkholderia pseudomallei K96243 3095640 YP_111056.1 CDS BPSS1048a NC_006351.1 1428105 1428290 D hypothetical protein 1428105..1428290 Burkholderia pseudomallei K96243 3097210 YP_111057.1 CDS BPSS1048b NC_006351.1 1428287 1428508 D hypothetical protein 1428287..1428508 Burkholderia pseudomallei K96243 3095132 YP_111058.1 CDS BPSS1048c NC_006351.1 1428512 1428727 D hypothetical protein 1428512..1428727 Burkholderia pseudomallei K96243 3095133 YP_111059.1 CDS BPSS1048d NC_006351.1 1428736 1428873 D hypothetical protein 1428736..1428873 Burkholderia pseudomallei K96243 3095686 YP_111060.1 CDS BPSS1049 NC_006351.1 1429034 1429246 D hypothetical protein 1429034..1429246 Burkholderia pseudomallei K96243 3095882 YP_111061.1 CDS BPSS1050 NC_006351.1 1429448 1430689 D hypothetical protein 1429448..1430689 Burkholderia pseudomallei K96243 3095883 YP_111062.1 CDS BPSS1051 NC_006351.1 1430689 1430895 D hypothetical protein 1430689..1430895 Burkholderia pseudomallei K96243 3096890 YP_111063.1 CDS BPSS1052 NC_006351.1 1430895 1432688 D Similar to Bacteriophage HP1 Replication protein Rep SWALL:REP_BPHP1 (SWALL:P51711) (775 aa) fasta scores: E(): 3.1e-41, 34.84% id in 442 aa, and to Haemophilus phage HP2 Rep SWALL:Q94N00 (EMBL:AY027935) (775 aa) fasta scores: E(): 3.1e-41, 34.68% id in 444 aa, and to Bacteriophage 186 replication gene A protein or cp87 SWALL:VPA_BP186 (SWALL:P41064) (694 aa) fasta scores: E(): 2e-39, 37.24% id in 443 aa; bacteriophage replication protein 1430895..1432688 Burkholderia pseudomallei K96243 3096276 YP_111064.1 CDS BPSS1053 NC_006351.1 1432704 1432970 D Limited similarity to Bacteriophage phi CTX orf34 SWALL:Q9ZXJ1 (EMBL:AB008550) (97 aa) fasta scores: E(): 0.0061, 30% id in 70 aa, and to Ralstonia solanacearum transcriptional activator transcription regulator protein rsc1904 or rs03470 SWALL:Q8XY59 (EMBL:AL646067) (82 aa) fasta scores: E(): 0.0072, 28.91% id in 83 aa; bacteriophage-acquired protein 1432704..1432970 Burkholderia pseudomallei K96243 3096277 YP_111065.1 CDS BPSS1054 NC_006351.1 1432967 1433173 D Limited similarity to Ralstonia solanacearum bacteriophage transcriptional activator-related transcription regulator protein rsc0964 or rs04403 SWALL:Q8Y0S9 (EMBL:AL646062) (73 aa) fasta scores: E(): 0.0084, 36.17% id in 47 aa, and to Ralstonia solanacearum transcriptional activator transcription regulator protein rsc1904 or rs03470 SWALL:Q8XY59 (EMBL:AL646067) (82 aa) fasta scores: E(): 0.096, 40% id in 50 aa; bacteriophage-acquired protein 1432967..1433173 Burkholderia pseudomallei K96243 3096039 YP_111066.1 CDS BPSS1055 NC_006351.1 1433260 1433916 D Similar to Mycobacterium celatum ParA-like protein SWALL:Q9XCD0 (EMBL:AF312688) (214 aa) fasta scores: E(): 1.1e-14, 35.6% id in 191 aa, and to Pseudomonas syringae Partition protein Par SWALL:Q9RBZ4 (EMBL:AF169828) (227 aa) fasta scores: E(): 2.1e-29, 47.34% id in 207 aa, and to Aquifex aeolicus hypothetical protein Aa35 aa35 SWALL:O66424 (EMBL:AE000667) (213 aa) fasta scores: E(): 3.3e-18, 37.85% id in 214 aa; partition protein 1433260..1433916 Burkholderia pseudomallei K96243 3095488 YP_111067.1 CDS BPSS1056 NC_006351.1 1434117 1434272 D CopG family transcriptional regulator 1434117..1434272 Burkholderia pseudomallei K96243 3095489 YP_111068.1 CDS BPSS1057 NC_006351.1 1434375 1434908 D Similar to the bacteriophage phiE125 gp29 SWALL:Q8W6S2 (EMBL:AF447491) (186 aa) fasta scores: E(): 1.2e-45, 72.83% id in 173 aa, and to Burkholderia thailandensis gp29 SWALL:Q8VP97 (EMBL:AY063741) (186 aa) fasta scores: E(): 1.2e-45, 72.83% id in 173 aa; bacteriophage gp29 protein 1434375..1434908 Burkholderia pseudomallei K96243 3094933 YP_111069.1 CDS BPSS1058 NC_006351.1 1434905 1435642 D Similar to Burkholderia thailandensis gp30 SWALL:Q8VP96 (EMBL:AY063741) (244 aa) fasta scores: E(): 3e-31, 43.72% id in 247 aa, and to Bacteriophage phiE125 gp30 SWALL:Q8W6S1 (EMBL:AF447491) (244 aa) fasta scores: E(): 3e-31, 43.72% id in 247 aa; bacteriophage gp30 protein 1434905..1435642 Burkholderia pseudomallei K96243 3096159 YP_111070.1 CDS BPSS1059 NC_006351.1 1435651 1436772 D Similar to Burkholderia thailandensis gp31 SWALL:Q8VP95 (EMBL:AY063741) (363 aa) fasta scores: E(): 9.6e-34, 37.96% id in 374 aa, and to Bacteriophage phiE125 gp31 SWALL:Q8W6S0 (EMBL:AF447491) (363 aa) fasta scores: E(): 9.6e-34, 37.96% id in 374 aa, and to Pseudomonas aeruginosa hypothetical protein pa0821 SWALL:Q9I5B8 (EMBL:AE004517) (362 aa) fasta scores: E(): 3.1e-20, 34.35% id in 326 aa; bacteriophage gp31 protein 1435651..1436772 Burkholderia pseudomallei K96243 3096160 YP_111071.1 CDS BPSS1060 NC_006351.1 1437337 1437660 D Similar to Xylella fastidiosa hypothetical protein Xf1703 SWALL:Q9PCS5 (EMBL:AE003994) (102 aa) fasta scores: E(): 2.6e-15, 44.89% id in 98 aa, and to Haemophilus influenzae hypothetical protein Hi1419 SWALL:YE19_HAEIN (SWALL:P44190) (99 aa) fasta scores: E(): 9.1e-15, 48.93% id in 94 aa, and to Anabaena sp. hypothetical protein All2402 SWALL:Q8YUE8 (EMBL:AP003589) (112 aa) fasta scores: E(): 3.4e-13, 52.43% id in 82 aa; hypothetical protein 1437337..1437660 Burkholderia pseudomallei K96243 3096773 YP_111072.1 CDS BPSS1061 NC_006351.1 1437657 1438019 D Similar to Xylella fastidiosa hypothetical protein Xf2763 SWALL:Q9P9V8 (EMBL:AE004082) (102 aa) fasta scores: E(): 7.8e-11, 43.61% id in 94 aa, and to Ralstonia solanacearum hypothetical protein rsp0076 or rs05545 SWALL:Q8XTN0 (EMBL:AL646076) (99 aa) fasta scores: E(): 1.3e-10, 46.93% id in 98 aa, and to Haemophilus influenzae hypothetical protein Hi1420 SWALL:YE20_HAEIN (SWALL:P44191) (97 aa) fasta scores: E(): 3.3e-09, 45.45% id in 88 aa; DNA binding protein 1437657..1438019 Burkholderia pseudomallei K96243 3095523 YP_111073.1 CDS BPSS1062 NC_006351.1 1438063 1439118 R Similar to Ralstonia solanacearum probable bacteriophage protein rsc1941 or rs03510 SWALL:Q8XY22 (EMBL:AL646067) (361 aa) fasta scores: E(): 3.6e-90, 62.07% id in 356 aa, and to Xanthomonas campestris phage-related capsid packaging protein Q or xcc2969 SWALL:AAM42241 (EMBL:AE012411) (343 aa) fasta scores: E(): 2.7e-84, 59.4% id in 335 aa, and to Salmonella typhi probable capsid portal protein sty4628 SWALL:Q8Z1E6 (EMBL:AL627283) (348 aa) fasta scores: E(): 2.6e-83, 62.06% id in 319 aa; hypothetical protein complement(1438063..1439118) Burkholderia pseudomallei K96243 3095524 YP_111074.1 CDS BPSS1063 NC_006351.1 1439115 1440920 R Similar to Bacteriophage P2 terminase, ATPase subunit P SWALL:VPP_BPP2 (SWALL:P25479) (590 aa) fasta scores: E(): 5.2e-136, 56.32% id in 593 aa, and to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM5 (EMBL:AB008550) (594 aa) fasta scores: E(): 7.1e-160, 67.37% id in 564 aa, and to Xanthomonas campestris phage-related terminase P or xcc2970 SWALL:AAM42242 (EMBL:AE012411) (594 aa) fasta scores: E(): 1.3e-152, 62.52% id in 579 aa, and to Xanthomonas axonopodis phage-related terminase P or xac2642 SWALL:AAM37489 (EMBL:AE011904) (594 aa) fasta scores: E(): 5e-152, 62.69% id in 579 aa; alternative start site at codon 13; bacteriophage terminase, ATPase subunit complement(1439115..1440920) Burkholderia pseudomallei K96243 3096665 YP_111075.1 CDS BPSS1064 NC_006351.1 1441028 1441837 D Similar to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM4 (EMBL:AB008550) (273 aa) fasta scores: E(): 7.2e-31, 45.07% id in 284 aa, and to Salmonella typhi capsid scaffolding protein sty3676 SWALL:Q8Z357 (EMBL:AL627279) (277 aa) fasta scores: E(): 6.3e-30, 46.15% id in 286 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1938 or rs03507 SWALL:Q8XY25 (EMBL:AL646067) (279 aa) fasta scores: E(): 6.3e-30, 48.45% id in 291 aa; bacteriophage protein 1441028..1441837 Burkholderia pseudomallei K96243 3096472 YP_111076.1 CDS BPSS1065 NC_006351.1 1441871 1442884 D Similar to Bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 5.6e-72, 54.97% id in 342 aa, and to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM3 (EMBL:AB008550) (338 aa) fasta scores: E(): 1.7e-81, 64.2% id in 338 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1937 or rs03506 SWALL:Q8XY26 (EMBL:AL646067) (338 aa) fasta scores: E(): 2.6e-81, 62.9% id in 337 aa; major capsid protein 1441871..1442884 Burkholderia pseudomallei K96243 3096473 YP_111077.1 CDS BPSS1066 NC_006351.1 1442881 1443570 D Similar to Bacteriophage P2 terminase, endonuclease subunit M SWALL:VPM_BPP2 (SWALL:P25476) (247 aa) fasta scores: E(): 1.8e-27, 46.29% id in 216 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1936 or rs03505 SWALL:Q8XY27 (EMBL:AL646067) (240 aa) fasta scores: E(): 4.1e-30, 49.16% id in 238 aa, and to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM2 (EMBL:AB008550) (233 aa) fasta scores: E(): 3.8e-29, 48.9% id in 229 aa, and to Bacteriophage 186 protein R SWALL:O80305 (EMBL:U32222) (249 aa) fasta scores: E(): 1.2e-28, 48% id in 225 aa; bacteriophage terminase, endonuclease subunit 1442881..1443570 Burkholderia pseudomallei K96243 3096983 YP_111078.1 CDS BPSS1067 NC_006351.1 1443670 1444149 D Similar to Bacteriophage P2 head completion/stabilization protein L SWALL:VPL_BPP2 (SWALL:P25475) (169 aa) fasta scores: E(): 2.5e-15, 42.25% id in 142 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1935 or rs03504 SWALL:Q8XY28 (EMBL:AL646067) (159 aa) fasta scores: E(): 2.3e-26, 55.34% id in 159 aa, and to Xanthomonas campestris phage-related capsid completion protein l or xcc2974 SWALL:AAM42246 (EMBL:AE012412) (155 aa) fasta scores: E(): 1.4e-20, 47.79% id in 159 aa; bacteriophage head completion/stabilization protein 1443670..1444149 Burkholderia pseudomallei K96243 3097183 YP_111079.1 CDS BPSS1068 NC_006351.1 1444149 1444400 D hypothetical protein 1444149..1444400 Burkholderia pseudomallei K96243 3097184 YP_111080.1 CDS BPSS1069 NC_006351.1 1444397 1444603 D Similar to Bacteriophage P2 tail protein X SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 2.4e-11, 69.81% id in 53 aa, and to Xanthomonas axonopodis phage-related tail protein X or xac2647 or xcc2975 SWALL:AAM42247 (EMBL:AE011905) (69 aa) fasta scores: E(): 3.6e-13, 59.42% id in 69 aa, and to Xanthomonas axonopodis phage-related tail protein X or xac2647 or xcc2975 SWALL:AAM37494 (EMBL:AE011905) (69 aa) fasta scores: E(): 3.6e-13, 59.42% id in 69 aa; bacteriophage tail protein X 1444397..1444603 Burkholderia pseudomallei K96243 3096023 YP_111081.1 CDS BPSS1070 NC_006351.1 1444618 1444962 D Similar to Xanthomonas campestris phage-related protein orf89 or xcc2976 SWALL:AAM42248(118 aa) (EMBL:AE012412)(118 aa) fasta scores: E(): 1.6e-15, 51.75% id in 114 aa,and to Xanthomonas axonopodis phage-related protein orf89 or xac2648 SWALL:AAM37495 (EMBL:AE011905) (118 aa) fasta scores: E(): 2.5e-15, 50.87% id in 114 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0908 pa0908 SWALL:Q9I549 (EMBL:AE004525) (124 aa) fasta scores: E():/ 1.3e-09, 39.28% id in 112 aa; bacteriophage membrane protein 1444618..1444962 Burkholderia pseudomallei K96243 3095772 YP_111082.1 CDS BPSS1071 NC_006351.1 1444964 1445236 D Similar to Xanthomonas axonopodis phage-related protein orf90 or xac2649 or xcc2977 SWALL:AAM37496 (EMBL:AE011905) (91 aa) fasta scores: E(): 4.7e-10, 41.75% id in 91 aa, and to Xanthomonas axonopodis phage-related protein orf90 or xac2649 or xcc2977 SWALL:AAM42249 (EMBL:AE011905) (91 aa) fasta scores: E(): 4.7e-10, 41.75% id in 91 aa, and to Bacteriophage phi CTX orf10 SWALL:Q9ZXL7 (EMBL:AB008550) (90 aa) fasta scores: E(): 2.9e-06, 37.5% id in 80 aa; bacteriophage membrane protein 1444964..1445236 Burkholderia pseudomallei K96243 3095773 YP_111083.1 CDS BPSS1072 NC_006351.1 1445233 1446045 D Similar to Ralstonia solanacearum phage-related protein rsc1931 or rs03500 SWALL:Q8XY32 (EMBL:AL646067) (268 aa) fasta scores: E(): 6.8e-50, 56.77% id in 273 aa, and to Bacteriophage phi CTX orf11 SWALL:Q9ZXL6 (EMBL:AB008550) (268 aa) fasta scores: E(): 1e-44, 50.92% id in 269 aa, and to Brucella melitensis hypothetical protein Bmeii0008 bmeii0008 SWALL:Q8YE10 (EMBL:AE009639) (174 aa) fasta scores: E(): 2.4e-09, 32.72% id in 165 aa; bacteriophage-acquired protein 1445233..1446045 Burkholderia pseudomallei K96243 3095135 YP_111084.1 CDS BPSS1073 NC_006351.1 1446042 1446482 D Limited similarity to Bacteriophage P2 protein LysB SWALL:LYSB_BPP2 (SWALL:P51770) (141 aa) fasta scores: E(): 0.00062, 29.92% id in 127 aa, and to Bacteriophage phi CTX orf12 SWALL:Q9ZXL5 (EMBL:AB008550) (153 aa) fasta scores: E(): 0.0018, 31.65% id in 139 aa, and to Bacteriophage 186 orf27 SWALL:O80310 (EMBL:U32222) (137 aa) fasta scores: E(): 0.0018, 32.14% id in 112 aa; bacteriophage protein 1446042..1446482 Burkholderia pseudomallei K96243 3096223 YP_111085.1 CDS BPSS1073A NC_006351.1 1446319 1446594 D Similar to Bacteriophage P2 LysC SWALL:Q8LTD0 (EMBL:AF063097) (96 aa) fasta scores: E(): 1.3e-09, 48.78% id in 82 aa, and to Bacteriophage WPhi LysC SWALL:Q7Y4E1 (EMBL:AY135739) (96 aa) fasta scores: E(): 3.2e-09, 48.78% id in 82 aa; hypothetical protein 1446319..1446594 Burkholderia pseudomallei K96243 3096224 YP_111086.1 CDS BPSS1074 NC_006351.1 1446587 1447003 D Similar to Bacteriophage P2 tail completion protein R SWALL:VPR_BPP2 (SWALL:P36933) (155 aa) fasta scores: E(): 3.8e-13, 35.87% id in 131 aa, and to Ralstonia solanacearum probable tail completion-like protein rsc1929 or rs03499 SWALL:Q8XY34 (EMBL:AL646067) (144 aa) fasta scores: E(): 4.5e-19, 43.47% id in 138 aa, and to Bacteriophage phi CTX orf13 SWALL:Q9ZXL3 (EMBL:AB008550) (178 aa) fasta scores: E(): 1.2e-18, 41.22% id in 131 aa; bacteriophage tail completion protein R 1446587..1447003 Burkholderia pseudomallei K96243 3096009 YP_111087.1 CDS BPSS1075 NC_006351.1 1447000 1447467 D Similar to Bacteriophage P2 tail completion proteinS SWALL:VPS_BPP2 (SWALL:P36934) (150 aa) fasta scores: E(): 2.8e-13, 37.66% id in 154 aa, and to Xanthomonas axonopodis phage-related tail protein s or xac2653 SWALL:AAM37500 (EMBL:AE011905) (148 aa) fasta scores: E(): 6.9e-25, 50.99% id in 151 aa, and to Bacteriophage phi CTX orf14 SWALL:Q9ZXL2 (EMBL:AB008550) (156 aa) fasta scores: E(): 9.4e-24, 51.65% id in 151 aa; bacteriophage tail completion protein S 1447000..1447467 Burkholderia pseudomallei K96243 3096178 YP_111088.1 CDS BPSS1076 NC_006351.1 1447594 1448124 D hypothetical protein 1447594..1448124 Burkholderia pseudomallei K96243 3096179 YP_111089.1 CDS BPSS1077 NC_006351.1 1448290 1449165 R Similar to Micrococcus lylae DNA methyltransferase MlyiM SWALL:Q93NZ3 (EMBL:AF355462) (266 aa) fasta scores: E(): 3.1e-08, 25.29% id in 253 aa, and to Xanthomonas campestris site-specific DNA-methyltransferase xcc2967 SWALL:AAM42239 (EMBL:AE012411) (234 aa) fasta scores: E(): 7e-38, 47.21% id in 233 aa, and to Xylella fastidiosa site-specific DNA-methyltransferase xf2313 SWALL:Q9PB32 (EMBL:AE004042) (243 aa) fasta scores: E(): 1.5e-37, 48.48% id in 231 aa; possible alternative start site at codon 50; site-specific DNA methyltransferase complement(1448290..1449165) Burkholderia pseudomallei K96243 3096642 YP_111090.1 CDS BPSS1078 NC_006351.1 1449240 1449920 D Similar to Bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 2.5e-14, 35.8% id in 229 aa, and to Xanthomonas campestris phage-related baseplate protein V or xcc2986 to codon 187 SWALL:AAM42258 (EMBL:AE012413) (187 aa) fasta scores: E(): 3e-16, 36.46% id in 181 aa, and to Bacteriophage phi CTX orf16 to codon 190 SWALL:Q9ZXL0 (EMBL:AB008550) (190 aa) fasta scores: E(): 4e-15, 35.67% id in 199 aa, and to Bacteriophage 186 orf32 SWALL:O80314 (EMBL:U32222) (213 aa) fasta scores: E(): 1.1e-14, 35.23% id in 210 aa; bacteriophage baseplate assembly protein V 1449240..1449920 Burkholderia pseudomallei K96243 3096211 YP_111091.1 CDS BPSS1079 NC_006351.1 1449917 1450279 D Similar to Bacteriophage P2 baseplate assembly protein W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 9.7e-12, 36.28% id in 113 aa, and to Bacteriophage phi CTX orf17 SWALL:Q9ZXK9 (EMBL:AB008550) (114 aa) fasta scores: E(): 8.9e-16, 43.59% id in 117 aa, and to Xanthomonas campestris phage-related baseplate protein W or xcc2987 SWALL:AAM42259 (EMBL:AE012413) (119 aa) fasta scores: E(): 1.3e-15, 56.56% id in 99 aa, and to Ralstonia solanacearum probable phage-related protein rsc1924 or rs03493 SWALL:Q8XY39 (EMBL:AL646067) (115 aa) fasta scores: E(): 3.3e-14, 48.98% id in 98 aa; bacteriophage baseplate assembly protein W 1449917..1450279 Burkholderia pseudomallei K96243 3096212 YP_111092.1 CDS BPSS1080 NC_006351.1 1450276 1451181 D Similar to Bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 3.2e-44, 45.6% id in 296 aa, and to Salmonella typhi phage baseplate assembly protein sty3689 SWALL:Q8Z344 (EMBL:AL627279) (302 aa) fasta scores: E(): 2e-48, 50.33% id in 296 aa, and to Salmonella typhi probable phage baseplate assembly protein sty4613 SWALL:Q8Z1G0 (EMBL:AL627283) (302 aa) fasta scores: E(): 3.6e-48, 50% id in 296 aa; bacteriophage baseplate assembly protein J 1450276..1451181 Burkholderia pseudomallei K96243 3096738 YP_111093.1 CDS BPSS1081 NC_006351.1 1451174 1451728 D Similar to Bacteriophage P2 tail protein I SWALL:VPI_BPP2 (SWALL:P26701) (176 aa) fasta scores: E(): 9.2e-13, 35.66% id in 143 aa, and to Xanthomonas axonopodis phage-related tail protein i or xac2656 SWALL:AAM37503 (EMBL:AE011905) (180 aa) fasta scores: E(): 2.2e-30, 50.29% id in 171 aa, and to Xanthomonas campestris phage-related tail protein I or xcc2983 SWALL:AAM42255 (EMBL:AE012412) (182 aa) fasta scores: E(): 5.4e-30, 46.89% id in 177 aa; bacteriophage tail protein I 1451174..1451728 Burkholderia pseudomallei K96243 3096365 YP_111094.1 CDS BPSS1082 NC_006351.1 1451739 1454102 D Similar to Bacteriophage phiE125 gp17 from codon 346 to codon 518 SWALL:Q8W6T4 (EMBL:AF447491) (462 aa) fasta scores: E(): 1.6e-06, 41.44% id in 111 aa, and to Xanthomonas campestris phage-related tail fiber protein orf8 or xcc2984 to codon 401 SWALL:AAM42256 (EMBL:AE012412) (401 aa) fasta scores: E(): 1.7e-19, 30.71% id in 394 aa, and to Xylella fastidiosa phage-related tail fiber protein xf1706 from codon 503 to end SWALL:Q9PCS2 (EMBL:AE003994) (387 aa) fasta scores: E(): 1.4e-07, 28.28% id in 251 aa; bacteriophage protein gp17 1451739..1454102 Burkholderia pseudomallei K96243 3096366 YP_111095.1 CDS BPSS1083 NC_006351.1 1454119 1454790 D Similar to Ralstonia solanacearum tail fiber assembly-like protein rsc1920 or rs03489 to codon 179 SWALL:Q8XY43 (EMBL:AL646067) (250 aa) fasta scores: E(): 4.6e-09, 41.73% id in 115 aa; bacteriophage-acquired protein 1454119..1454790 Burkholderia pseudomallei K96243 3095547 YP_111096.1 CDS BPSS1084 NC_006351.1 1454846 1456018 D Similar to Bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 1.9e-90, 61.63% id in 391 aa, and to Ralstonia solanacearum probable phage-related protein rsc1918 or rs03487 SWALL:Q8XY45 (EMBL:AL646067) (391 aa) fasta scores: E(): 2.7e-100, 67.26% id in 388 aa, and to Salmonella typhimurium fels-2 prophage: similar to tail sheath proteins in phage p2 stm2701 SWALL:Q8ZMV0 (EMBL:AE008823) (390 aa) fasta scores: E(): 1e-97, 66.83% id in 389 aa; bacteriophage major tail sheath protein 1454846..1456018 Burkholderia pseudomallei K96243 3095388 YP_111097.1 CDS BPSS1085 NC_006351.1 1456034 1456543 D Similar to Bacteriophage P2 major tail tube protein FII SWALL:VPF2_BPP2 (SWALL:P22502) (171 aa) fasta scores: E(): 2.2e-26, 44.7% id in 170 aa, and to Xanthomonas campestris phage-related tail protein FII or xcc2989 SWALL:AAM42261 (EMBL:AE012413) (169 aa) fasta scores: E(): 2e-36, 54.16% id in 168 aa, and to Bacteriophage phi CTX orf23 SWALL:Q9ZXK3 (EMBL:AB008550) (171 aa) fasta scores: E(): 4.7e-33, 52.63% id in 171 aa; bacteriophage major tail tube protein 1456034..1456543 Burkholderia pseudomallei K96243 3095389 YP_111098.1 CDS BPSS1086 NC_006351.1 1456601 1456945 D Similar to Bacteriophage P2 protein gpe E SWALL:O64313 (EMBL:AF063097) (91 aa) fasta scores: E(): 1.7e-13, 56.81% id in 88 aa, and to Bacteriophage phi CTX orf24 SWALL:Q9ZXK2 (EMBL:AB008550) (108 aa) fasta scores: E(): 6.9e-14, 54.83% id in 93 aa; bacteriophage protein 1456601..1456945 Burkholderia pseudomallei K96243 3095014 YP_111099.1 CDS BPSS1086a NC_006351.1 1456954 1457067 D Similar to Xanthomonas campestris phage-related protein Orf52 SWALL:Q8P6H8 (EMBL:AE012413) (37 aa) fasta scores: E(): 1.2e-07, 62.16% id in 37 aa, and to Bacteriophage phi CTX Orf24.5 SWALL:Q9ZXK1 (EMBL:AB008550) (39 aa) fasta scores: E(): 6.3e-07, 56.75% id in 37 aa; hypothetical protein 1456954..1457067 Burkholderia pseudomallei K96243 3095056 YP_111100.1 CDS BPSS1087 NC_006351.1 1457064 1460030 D Similar to Bacteriophage P2 protein gpt T SWALL:O64314 (EMBL:AF063097) (815 aa) fasta scores: E(): 1.7e-10, 23.27% id in 782 aa, and to Ralstonia solanacearum probable phage-related tail transmembrane protein rsc1914 or rs03483 SWALL:Q8XY49 (EMBL:AL646067) (887 aa) fasta scores: E(): 6.3e-91, 40.06% id in 991 aa, and to Salmonella typhimurium fels-2 prophage:similar to orfG protein in phage 186 stm2697 SWALL:Q8ZMV3 (EMBL:AE008823) (935 aa) fasta scores: E(): 3.7e-18, 23.92% id in 1024 aa; bacteriophage membrane protein 1457064..1460030 Burkholderia pseudomallei K96243 3095057 YP_111101.1 CDS BPSS1088 NC_006351.1 1460048 1460473 D Similar to Bacteriophage phi CTX orf26 SWALL:Q9ZXJ9 (EMBL:AB008550) (146 aa) fasta scores: E(): 1.1e-21, 52% id in 125 aa, and to Xanthomonas campestris phage-related tail protein U or xcc2993 SWALL:AAM42265 (EMBL:AE012413) (133 aa) fasta scores: E(): 2.1e-21, 52.8% id in 125 aa, and to Ralstonia solanacearum probable phage-related tail protein rsc1913 or rs03482 SWALL:Q8XY50 (EMBL:AL646067) (140 aa) fasta scores: E(): 2.3e-20, 45.31% id in 128 aa; bacteriophage tail-related protein 1460048..1460473 Burkholderia pseudomallei K96243 3097117 YP_111102.1 CDS BPSS1089 NC_006351.1 1460473 1461573 D Similar to Bacteriophage 186 late control gene protein D SWALL:VPD_BP186 (SWALL:P21679) (389 aa) fasta scores: E(): 1.3e-34, 41.59% id in 363 aa, and to Xanthomonas campestris phage-related tail protein D or xcc2994 SWALL:AAM42266 (EMBL:AE012413) (328 aa) fasta scores: E(): 1.6e-62, 49.69% id in 328 aa, and to Bacteriophage phi CTX orf27 SWALL:Q9ZXJ8 (EMBL:AB008550) (424 aa) fasta scores: E(): 2.9e-49, 42.68% id in 328 aa; bacteriophage late control gene D protein 1460473..1461573 Burkholderia pseudomallei K96243 3096031 YP_111103.1 CDS ald NC_006351.1 1462408 1463523 R Similar to Vibrio proteolyticus alanine dehydrogenase ald SWALL:O85596 (EMBL:AF070716) (374 aa) fasta scores: E(): 5.5e-77, 63.76% id in 367 aa, and to Vibrio cholerae alanine dehydrogenase vc1905 SWALL:Q9KQU3 (EMBL:AE004266) (374 aa) fasta scores: E(): 3.2e-77, 64.01% id in 364 aa; alanine dehydrogenase complement(1462408..1463523) Burkholderia pseudomallei K96243 3095974 YP_111104.1 CDS BPSS1091 NC_006351.1 1464248 1464577 R Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsc0867 or rs04950 SWALL:Q8Y126 (EMBL:AL646061) (96 aa) fasta scores: E(): 3.2e-07, 43.01% id in 93 aa, and to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 2.6e-06, 39.17% id in 97 aa, and to Ralstonia solanacearum hns-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 2.6e-05, 35.71% id in 98 aa; hypothetical protein complement(1464248..1464577) Burkholderia pseudomallei K96243 3096032 YP_111105.1 CDS BPSS1092 NC_006351.1 1464591 1465142 R Similar to Pseudomonas aeruginosa hypothetical protein Pa2582 SWALL:Q9I0Q4 (EMBL:AE004686) (177 aa) fasta scores: E(): 1.2e-14, 41.66% id in 180 aa, and to Escherichia coli ProP effector ProQ or b1831 SWALL:PROQ_ECOLI (SWALL:P45577) (232 aa) fasta scores: E(): 4.3e-06, 37.06% id in 116 aa, and to Escherichia coli O157:H7 proq protein that influences osmotic activation of ProP ProQ or z2878 or ecs2541 SWALL:Q8XCM4 (EMBL:AE005405) (232 aa) fasta scores: E(): 4.3e-06, 37.06% id in 116 aa; possible alternative start site at codon 22; hypothetical protein complement(1464591..1465142) Burkholderia pseudomallei K96243 3096591 YP_111106.1 CDS BPSS1093 NC_006351.1 1465582 1466418 D Similar to Escherichia coli 2-keto-4-pentenoate hydratase MhpD or b0350 from codon 25 SWALL:MHPD_ECOLI (SWALL:P77608) (269 aa) fasta scores: E(): 5.1e-06, 30.07% id in 266 aa, and to Agrobacterium tumefaciens hypothetical protein atu4592 atu4592 or agr_l_566 from codon 24 SWALL:Q8U762 (EMBL:AE009387) (270 aa) fasta scores: E(): 2.2e-13, 29.54% id in 264 aa, and to Ralstonia solanacearum hydratase rsp0891 or rs01662 from codon 89 SWALL:Q8XRG3 (EMBL:AL646081) (265 aa) fasta scores: E(): 5e-07, 34.16% id in 161 aa. Possible alternative translational start site after codon 24; hydratase 1465582..1466418 Burkholderia pseudomallei K96243 3097162 YP_111107.1 CDS BPSS1094 NC_006351.1 1466788 1467363 D Similar to Rhodopirellula baltica hypothetical protein SWALL:Q7UN29 (EMBL:BX294146) (182 aa) fasta scores: E(): 1e-11, 36.11% id in 180 aa. C-terminal region is similar to the C-terminal region of Vibrio cholerae hypothetical protein VC1375 SWALL:Q9KS84 (EMBL:AE004217) (242 aa) fasta scores: E(): 1.1e-19, 52.38% id in 126 aa; hypothetical protein 1466788..1467363 Burkholderia pseudomallei K96243 3097163 YP_111108.1 CDS BPSS1095 NC_006351.1 1467360 1469207 D Similar to Legionella pneumophila chaperone protein DnaK to codon 431 SWALL:DNAK_LEGPN (SWALL:O32482) (644 aa) fasta scores: E(): 1.5e-08, 26.22% id in 328 aa, and to Vibrio cholerae DnaK-related protein vc1374 to codon 611 SWALL:Q9KS85 (EMBL:AE004217) (631 aa) fasta scores: E(): 2.3e-137, 58.09% id in 618 aa, and to Vibrio cholerae DnaK-related protein vc1373 to codon 611 SWALL:Q9KS86 (EMBL:AE004217) (948 aa) fasta scores: E(): 2.9e-67, 39.74% id in 629 aa; heat-shock chaperone protein 1467360..1469207 Burkholderia pseudomallei K96243 3095261 YP_111109.1 CDS BPSS1096 NC_006351.1 1469211 1472018 D Similar to Legionella pneumophila chaperone protein DnaK to codon 347 SWALL:DNAK_LEGPN (SWALL:O32482) (644 aa) fasta scores: E(): 3e-06, 25.72% id in 346 aa, and to the full-length Vibrio cholerae DnaK-related protein vc1373 SWALL:Q9KS86 (EMBL:AE004217) (948 aa) fasta scores: E(): 1.3e-84, 47.05% id in 952 aa, and to Vibrio cholerae DnaK-related protein vc1374 to codon 606 SWALL:Q9KS85 (EMBL:AE004217) (631 aa) fasta scores: E(): 1.6e-46, 40.6% id in 628 aa; chaperone heat-shock protein 1469211..1472018 Burkholderia pseudomallei K96243 3096225 YP_111110.1 CDS BPSS1097 NC_006351.1 1472313 1473446 R Similar to Bacillus anthracis capsule biosynthesis protein CapA or pxo2-56 SWALL:CAPA_BACAN (SWALL:P19579) (411 aa) fasta scores: E(): 2.5e-08, 24.07% id in 324 aa, and to horizontally acquired Meloidogyne artiellia polyglutamate synthase ths SWALL:Q8T376 (EMBL:AJ310212) (361 aa) fasta scores: E(): 1.4e-79, 56.51% id in 361 aa, and to Mycobacterium tuberculosis hypothetical 41.5 kDa protein rv0574c or mtv039.12c or mt0602 SWALL:O53771 (EMBL:AL021942) (380 aa) fasta scores: E(): 1.4e-65, 50.98% id in 355 aa. Possible alternative translational start; capsule biosynthesis protein complement(1472313..1473446) Burkholderia pseudomallei K96243 3096226 YP_111111.1 CDS BPSS1098 NC_006351.1 1474016 1474276 R Similar to Rhizobium meliloti hypothetical protein r01197 or smc01759 SWALL:Q92QV2 (EMBL:AL591786) (72 aa) fasta scores: E(): 0.00011, 37.87% id in 66 aa; hypothetical protein complement(1474016..1474276) Burkholderia pseudomallei K96243 3094929 YP_111112.1 CDS BPSS1099 NC_006351.1 1475705 1476328 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0198 or rs00630 SWALL:Q8Y2Y3 (EMBL:AL646058) (213 aa) fasta scores: E(): 6.9e-45, 56.28% id in 199 aa; hypothetical protein complement(1475705..1476328) Burkholderia pseudomallei K96243 3097186 YP_111113.1 CDS BPSS1100 NC_006351.1 1476380 1478893 R Similar to Escherichia coli, and Escherichia coli O157:H7 cation transport ATPase MgtA or Mgt or CorB or b4242 or z5853 or ecs5219 SWALL:ATMA_ECOLI (SWALL:P39168) (898 aa) fasta scores: E(): 9.1e-46, 27.56% id in 849 aa, and to Methanobacterium thermoautotrophicum cation-transporting p-ATPase pacL mth1001 SWALL:O27082 (EMBL:AE000873) (844 aa) fasta scores: E(): 7.2e-64, 35.3% id in 830 aa, and to Streptomyces coelicolor transport ATPase sco2499 or scc121.02C SWALL:Q9L2I4 (EMBL:AL939112) (1472 aa) fasta scores: E(): 4.6e-48, 32.07% id in 876 aa; cation transport ATPase complement(1476380..1478893) Burkholderia pseudomallei K96243 3097187 YP_111114.1 CDS BPSS1101 NC_006351.1 1478991 1479470 R Similar to Ralstonia solanacearum signal peptide protein rsc1315 or rs02837 SWALL:Q8XZT0 (EMBL:AL646063) (141 aa) fasta scores: E(): 3.5e-08, 35.71% id in 140 aa; hypothetical protein complement(1478991..1479470) Burkholderia pseudomallei K96243 3095501 YP_111115.1 CDS BPSS1102 NC_006351.1 1480496 1481305 D Similar to Streptococcus agalactiae hypothetical 25.7 kDa protein SWALL:O54084 (EMBL:Y12224) (228 aa) fasta scores: E(): 9.8e-09, 27.12% id in 188 aa, and to Streptomyces galilaeus AknG SWALL:Q9L546 (EMBL:AF257324) (286 aa) fasta scores: E(): 5e-08, 36% id in 150 aa, and to Streptomyces galilaeus AknG SWALL:Q8VWA8 (EMBL:AB008466) (286 aa) fasta scores: E(): 5e-08, 36% id in 150 aa; hypothetical protein 1480496..1481305 Burkholderia pseudomallei K96243 3096440 YP_111116.1 CDS BPSS1103 NC_006351.1 1481559 1482989 R Similar to Paenibacillus thiaminolyticus thiaminase I precursor to codon 383 SWALL:THI1_PANTH (SWALL:P45741) (409 aa) fasta scores: E(): 1.3e-40, 35.84% id in 385 aa; periplasmic thiamine binding protein complement(1481559..1482989) Burkholderia pseudomallei K96243 3096441 YP_111117.1 CDS BPSS1104 NC_006351.1 1483079 1483879 R Similar to Salmonella typhimurium phosphomethylpyrimidine kinase ThiD or stm2146 SWALL:THID_SALTY (SWALL:P55882) (266 aa) fasta scores: E(): 4.1e-47, 57.79% id in 263 aa, and to Salmonella typhi phosphomethylpyrimidine kinase ThiD or sty2375 SWALL:Q8Z5C9 (EMBL:AL627273) (266 aa) fasta scores: E(): 7.2e-47, 57.41% id in 263 aa, and to Escherichia coli O157:H7 phosphomethylpyrimidine kinase ThiD or z3267 or ecs2906 SWALL:Q8X7G5 (EMBL:AE005436) (266 aa) fasta scores: E(): 2.9e-46, 56.65% id in 263 aa; phosphomethylpyrimidine kinase complement(1483079..1483879) Burkholderia pseudomallei K96243 3095063 YP_111118.1 CDS BPSS1105 NC_006351.1 1484107 1484847 R Similar to Streptomyces avermitilis C5-O-methyltransferase AveD SWALL:Q9S0N6 (EMBL:AB032524) (283 aa) fasta scores: E(): 9.3e-07, 38.28% id in 128 aa, and to Caulobacter crescentus methyltransferase, Cc1846 SWALL:Q9A780 (EMBL:AE005858) (243 aa) fasta scores: E(): 3.9e-08, 31.08% id in 222 aa, and to Nocardia aerocolonigenes methyltransferase RbmF SWALL:CAC93718 (EMBL:AF534707) (273 aa) fasta scores: E(): 3.3e-07, 39.49% id in 119 aa; methyltransferase complement(1484107..1484847) Burkholderia pseudomallei K96243 3097019 YP_111119.1 CDS BPSS1106 NC_006351.1 1484863 1485852 R Similar to Bacteriophage SP01 deoxyuridylate hydroxymethyltransferase 29 SWALL:DUHM_BPSP1 (SWALL:P31654) (383 aa) fasta scores: E(): 6.8e-12, 30.04% id in 223 aa, and to Rhizobium loti thymidylate synthase ThyA or mll1467 SWALL:Q98KH9 (EMBL:AP002997) (264 aa) fasta scores: E(): 8e-08, 24.05% id in 237 aa, and to Agrobacterium tumefaciens thymidylate synthase ThyA or atu2047 or agr_c_3709 SWALL:Q8UDS3 (EMBL:AE009155) (279 aa) fasta scores: E(): 6.8e-07, 23.72% id in 236 aa; thymidylate synthase complement(1484863..1485852) Burkholderia pseudomallei K96243 3097020 YP_111120.1 CDS BPSS1107 NC_006351.1 1485854 1486309 R hypothetical protein complement(1485854..1486309) Burkholderia pseudomallei K96243 3096092 YP_111121.1 CDS BPSS1108 NC_006351.1 1486306 1486869 R Similar to Methanococcus jannaschii ADP-ribose pyrophosphatase NudF or mj1149 SWALL:ADPP_METJA (SWALL:Q58549) (169 aa) fasta scores: E(): 4.5e-07, 33.33% id in 123 aa, and to Aeropyrum pernix hypothetical protein Ape2080 ape2080 SWALL:Q9YA58 (EMBL:AP000063) (175 aa) fasta scores: E(): 2.9e-11, 42.4% id in 125 aa, and to Methanopyrus kandleri ADP-ribose pyrophosphatase mk1028 SWALL:Q8TWK5 (EMBL:AE010391) (154 aa) fasta scores: E(): 2.7e-10, 46.15% id in 117 aa; alternative start site at codon 30; NUDIX/MutT family protein complement(1486306..1486869) Burkholderia pseudomallei K96243 3095295 YP_111122.1 CDS BPSS1109 NC_006351.1 1487368 1488162 D Similar to the C-terminal regions of Arabidopsis thaliana (mouse ear cress) phosphoethanolamine N-methyltransferase 3 NMT or at1g73600 or f6d5.1 or f25p22.1 PEM3_ARATH SWALL:PEM3_ARATH (SWALL:Q9C6B9) (490 aa) fasta scores: E(): 2.6e-24, 33.59% id in 259 aa, and Arabidopsis thaliana phosphoethanolamine N-methyltransferase 2 NMT2 or at1g48600 or t1n15_20 or t1n15.22/t1n15.23; methyltransferase 1487368..1488162 Burkholderia pseudomallei K96243 3095296 YP_111123.1 CDS BPSS1110 NC_006351.1 1488229 1489377 D Similar to Pseudomonas sp. gamma-butyrobetaine,2-oxoglutarate dioxygenase SWALL:BODG_PSESK (SWALL:P80193) (383 aa) fasta scores: E(): 5.2e-20, 27.68% id in 372 aa, and to Rattus norvegicus gamma-butyrobetaine,2-oxoglutarate dioxygenase Bbox1 or BbH SWALL:BODG_RAT (SWALL:Q9QZU7) (387 aa) fasta scores: E(): 1.2e-21, 28.14% id in 366 aa, and to Drosophila melanogaster eg:bacr7a4.9 protein eg:bacr7a4.9 or cg14630 SWALL:Q9NF72 (EMBL:AL109630) (504 aa) fasta scores: E(): 3.5e-21, 29.03% id in 372 aa; gamma-butyrobetaine,2-oxoglutarate dioxygenase 1488229..1489377 Burkholderia pseudomallei K96243 3094900 YP_111124.1 CDS BPSS1111 NC_006351.1 1489574 1490410 R Similar to Rhizobium loti hypothetical protein Mlr7896 SWALL:Q984Q1 (EMBL:AP003012) (278 aa) fasta scores: E(): 8.9e-49, 54.31% id in 278 aa, and to Salmonella typhimurium integral membrane protein stm3796A SWALL:Q8ZL13 (EMBL:AE008877) (286 aa) fasta scores: E(): 2.1e-29, 39.27% id in 275 aa, and to Streptomyces coelicolor integral membrane protein sco3164 or sce87.15C SWALL:Q9RKC3 (EMBL:AL939115) (281 aa) fasta scores: E(): 1e-26, 37.9% id in 277 aa; hypothetical protein complement(1489574..1490410) Burkholderia pseudomallei K96243 3097217 YP_111125.1 CDS BPSS1112 NC_006351.1 1491119 1492609 D Similar to Pseudomonas aeruginosa arginine/ornithine antiporter ArcD or pa5170 SWALL:ARCD_PSEAE (SWALL:P18275) (482 aa) fasta scores: E(): 5.8e-95, 55.88% id in 476 aa, and to Clostridium perfringens arginine/ornithine antiporter ArcD or cpe0170 SWALL:ARCD_CLOPE (SWALL:Q46170) (478 aa) fasta scores: E(): 8.7e-86, 50.1% id in 471 aa, and to Pseudomonas aeruginosa probable amino acid permease pa1194 SWALL:Q9I4E4 (EMBL:AE004549) (472 aa) fasta scores: E(): 2.6e-81, 51.69% id in 472 aa. N-terminus is extended in comparison to orthologues. Possible alternative start site at codon 23; amino acid permease 1491119..1492609 Burkholderia pseudomallei K96243 3097218 YP_111126.1 CDS BPSS1113 NC_006351.1 1492837 1493526 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0998 or rs02331 SWALL:Q8XR63 (EMBL:AL646082) (197 aa) fasta scores: E(): 2.7e-37, 56.06% id in 198 aa, and to Xanthomonas axonopodis integral membrane protein xac2748 SWALL:AAM37593 (EMBL:AE011915) (253 aa) fasta scores: E(): 1.5e-26, 43.11% id in 218 aa, and to Xanthomonas campestris integral membrane protein xcc2577 SWALL:AAM41849 (EMBL:AE012370) (228 aa) fasta scores: E(): 2e-25, 43.54% id in 209 aa. Possible alternative translational start site; peptidase 1492837..1493526 Burkholderia pseudomallei K96243 3095754 YP_111127.1 CDS ftsH NC_006351.1 1493693 1495693 R Similar to Bradyrhizobium japonicum metalloprotease FtsH SWALL:Q9XBG5 (EMBL:AJ243808) (640 aa) fasta scores: E(): 2e-93, 46.29% id in 635 aa, and to Anabaena sp. cell division protein FtsH or all4936 SWALL:Q8YMJ7 (EMBL:AP003598) (645 aa) fasta scores: E(): 1.3e-97, 48.94% id in 615 aa, and to Chlorobium tepidum cell division protein FtsH FtsH-1 or ct0127 SWALL:AAM71375 (EMBL:AE012791) (706 aa) fasta scores: E(): 5.9e-96, 47.29% id in 666 aa, and to Synechocystis sp. cell division protein FtsH homolog 3 sll1463 SWALL:FTH3_SYNY3 (SWALL:P73437) (628 aa) fasta scores: E(): 5.4e-94, 48.44% id in 611 aa; FtsH-2 protease complement(1493693..1495693) Burkholderia pseudomallei K96243 3095258 YP_111128.1 CDS BPSS1115 NC_006351.1 1495747 1496259 R hypothetical protein complement(1495747..1496259) Burkholderia pseudomallei K96243 3096397 YP_111129.1 CDS BPSS1116 NC_006351.1 1497078 1498832 D Similar to Mycobacterium tuberculosis hypothetical protein rv2913c or mt2981 or mtcy274.45c or mtcy338.01C SWALL:YT13_MYCTU (SWALL:Q10830) (611 aa) fasta scores: E(): 1.6e-136, 58.19% id in 586 aa, and to Caulobacter crescentus hypothetical protein Cc3460 SWALL:Q9A2U6 (EMBL:AE006004) (581 aa) fasta scores: E(): 1.6e-24, 28.21% id in 599 aa, and to Pyrococcus abyssi D-aminoacylase NdaD or pab0090 SWALL:Q9V2D3 (EMBL:AJ248283) (526 aa) fasta scores: E(): 3.8e-09, 26.06% id in 541 aa; possible alternative start at codon 15; hypothetical protein 1497078..1498832 Burkholderia pseudomallei K96243 3096398 YP_111130.1 CDS BPSS1117 NC_006351.1 1498963 1499634 R Similar to Yersinia pestis hypothetical protein Ypo4077 SWALL:Q8Z9W2 (EMBL:AJ414160) (214 aa) fasta scores: E(): 2.3e-38, 52.58% id in 213 aa, and to Vibrio cholerae hypothetical protein Vc2666 SWALL:Q9KNR5 (EMBL:AE004332) (205 aa) fasta scores: E(): 1.6e-27, 42.5% id in 200 aa, and to Anabaena sp. hypothetical protein All2491 SWALL:Q8YU63 (EMBL:AP003589) (227 aa) fasta scores: E(): 1.6e-13, 29.68% id in 219 aa; hypothetical protein complement(1498963..1499634) Burkholderia pseudomallei K96243 3095166 YP_111131.1 CDS BPSS1118 NC_006351.1 1499785 1500882 D Similar to Pseudomonas aeruginosa probable RND efflux membrane fusion protein precursor pa4206 SWALL:Q9HWH5 (EMBL:AE004837) (370 aa) fasta scores: E(): 9.3e-39, 39.07% id in 366 aa, and to Vibrio cholerae hypothetical protein Vc0165 SWALL:Q9KVI1 (EMBL:AE004106) (368 aa) fasta scores: E(): 3.1e-34, 35.21% id in 355 aa, and to Rhizobium loti RND efflux membrane fusion protein precursor mlr3647 SWALL:Q98FR7 (EMBL:AP003002) (465 aa) fasta scores: E(): 2.4e-29, 32.15% id in 367 aa; HlyD family protein 1499785..1500882 Burkholderia pseudomallei K96243 3094898 YP_111132.1 CDS BPSS1119 NC_006351.1 1500933 1503989 D Similar to Pseudomonas aeruginosa probable RND efflux transporter pa4207 SWALL:Q9HWH4 (EMBL:AE004837) (1029 aa) fasta scores: E(): 1.2e-213, 58.8% id in 1017 aa, and to Pseudomonas aeruginosa probable RND efflux transporter pa4375 SWALL:Q9HW27 (EMBL:AE004853) (1018 aa) fasta scores: E(): 1.9e-184, 51.99% id in 1002 aa. CDS is shorter at the N-terminus in comparison to orthologues.; RND efflux transporter 1500933..1503989 Burkholderia pseudomallei K96243 3094899 YP_111133.1 CDS BPSS1120 NC_006351.1 1504124 1505662 D Similar to Pseudomonas putida efflux protein TtgC SWALL:Q9WWZ8 (EMBL:AF031417) (484 aa) fasta scores: E(): 9.1e-76, 49.68% id in 483 aa, and to Pseudomonas aeruginosa outer membrane protein OprM precursor or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.8e-85, 56.19% id in 468 aa, and to Xanthomonas axonopodis outer membrane protein OprM or xac2842 SWALL:AAM37687 (EMBL:AE011925) (503 aa) fasta scores: E(): 5.4e-84, 53.18% id in 502 aa; outer membrane efflux protein 1504124..1505662 Burkholderia pseudomallei K96243 3094890 YP_111134.1 CDS ribA NC_006351.1 1505992 1506636 D catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 1505992..1506636 Burkholderia pseudomallei K96243 3095553 YP_111135.1 CDS BPSS1122 NC_006351.1 1506633 1508330 D Similar to Pseudomonas glumae WD-repeat protein ToxC SWALL:Q8RS37 (EMBL:AB040403) (563 aa) fasta scores: E(): 6.3e-132, 63.74% id in 571 aa, and to Streptomyces coelicolor repetative protein sco2692 or scc61a.13 SWALL:Q9KYI0 (EMBL:AL939113) (626 aa) fasta scores: E(): 3.5e-15, 28.92% id in 560 aa, and to Anabaena sp. WD-repeat protein all4834 from codon 950 of Q8YMU3 SWALL:Q8YMU3 (EMBL:AP003597) (1551 aa) fasta scores: E(): 4.3e-13, 24.11% id in 593 aa; hypothetical protein 1506633..1508330 Burkholderia pseudomallei K96243 3095554 YP_111136.1 CDS BPSS1123 NC_006351.1 1508327 1509037 D Similar to Bacillus halodurans hypothetical protein Bh2058 SWALL:Q9KB70 (EMBL:AP001514) (241 aa) fasta scores: E(): 8.5e-06, 29.63% id in 162 aa; hypothetical protein 1508327..1509037 Burkholderia pseudomallei K96243 3096134 YP_111137.1 CDS BPSS1124 NC_006351.1 1509034 1510017 D Similar to Pseudomonas glumae trp-2 toxD SWALL:Q8RS36 (EMBL:AB040403) (325 aa) fasta scores: E(): 1.4e-88, 68.71% id in 326 aa, and to Streptomyces coelicolor hypothetical protein sco2695 or scc61a.16 SWALL:Q9KYH7 (EMBL:AL939113) (256 aa) fasta scores: E(): 5.4e-22, 42.85% id in 252 aa, and to Chlamydia trachomatis serine/threonine protein kinase ct145 SWALL:O84147 (EMBL:AE001288) (614 aa) fasta scores: E(): 1.2e-13, 34.49% id in 258 aa; hypothetical protein 1509034..1510017 Burkholderia pseudomallei K96243 3096433 YP_111138.1 CDS BPSS1125 NC_006351.1 1510127 1511314 D Similar to Escherichia coli riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase RibD or RibG or b0414 SWALL:RIBD_ECOLI (SWALL:P25539) (367 aa) fasta scores: E(): 1.8e-33, 39.88% id in 336 aa, and to Xanthomonas campestris riboflavin-specific deaminase/5-amino-6-uracil reductase RibD or xcc0693 SWALL:AAM40009 (EMBL:AE012168) (364 aa) fasta scores: E(): 4.6e-40, 45.05% id in 384 aa, and to Pseudomonas aeruginosa riboflavin-specific deaminase/reductase RibD or pa4056 SWALL:Q9HWX2 (EMBL:AE004822) (373 aa) fasta scores: E(): 5.4e-40, 44.11% id in 365 aa; riboflavin biosynthesis protein 1510127..1511314 Burkholderia pseudomallei K96243 3096434 YP_111139.1 CDS BPSS1126 NC_006351.1 1511374 1512426 D Similar to Streptomyces glaucescens tetracenomycin polyketide synthesis 8-O-methyl transferase TcmO SWALL:TCMO_STRGA (SWALL:P39896) (339 aa) fasta scores: E(): 2.8e-13, 26.74% id in 329 aa, and to Streptomyces sp. JP95 methyltransferase GrhL SWALL:AAM33664 (EMBL:AF509565) (343 aa) fasta scores: E(): 2.1e-17, 30.14% id in 355 aa, and to Streptomyces argillaceus O-methyltransferase MtmMI SWALL:Q9R6R8 (EMBL:AF077869) (345 aa) fasta scores: E(): 4.8e-15, 30.47% id in 292 aa; O-methyltransferase 1511374..1512426 Burkholderia pseudomallei K96243 3096556 YP_111140.1 CDS BPSS1127 NC_006351.1 1512429 1513292 D glyoxylase/bleomycin resistance protein/dioxygenase superfamily protein 1512429..1513292 Burkholderia pseudomallei K96243 3096232 YP_111141.1 CDS BPSS1128 NC_006351.1 1513324 1514727 D Similar to Burkholderia cepacia major facilitator superfamily transporter homolog SWALL:Q9RPH2 (EMBL:AF158699) (531 aa) fasta scores: E(): 5.1e-21, 27.65% id in 452 aa, and to Ralstonia solanacearum transport transmembrane protein rsc2324 or rs01224 SWALL:Q8XWZ4 (EMBL:AL646069) (475 aa) fasta scores: E(): 1.2e-69, 47.34% id in 471 aa, and to Mycobacterium tuberculosis hypothetical 47.7 kDa protein rv1634 or mtcy01b2.26 or mt1670 SWALL:O06151 (EMBL:Z95554) (471 aa) fasta scores: E(): 4.2e-47, 39.22% id in 464 aa; major facilitator transporter 1513324..1514727 Burkholderia pseudomallei K96243 3096233 YP_111142.1 CDS BPSS1129 NC_006351.1 1514792 1515292 D Limited similarity to Yersinia pestis membrane protein ypo0899 SWALL:Q8ZHJ3 (EMBL:AJ414145) (165 aa) fasta scores: E(): 0.0034, 29.63% id in 135 aa; hypothetical protein 1514792..1515292 Burkholderia pseudomallei K96243 3097249 YP_111143.1 CDS BPSS1130 NC_006351.1 1515311 1516720 D hypothetical protein 1515311..1516720 Burkholderia pseudomallei K96243 3096373 YP_111144.1 CDS BPSS1131 NC_006351.1 1516928 1517731 R Similar to Vibrio cholerae transcriptional regulator, LuxR family, from codon 69 of vca1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 3.5e-33, 41.41% id in 227 aa; LuxR family transcriptional regulator complement(1516928..1517731) Burkholderia pseudomallei K96243 3096374 YP_111145.1 CDS BPSS1132 NC_006351.1 1518113 1518532 R Similar to Pseudomonas aeruginosa hypothetical protein Pa2120 SWALL:Q9I1Z5 (EMBL:AE004639) (142 aa) fasta scores: E(): 2.6e-28, 59.23% id in 130 aa, and to Ralstonia solanacearum hypothetical protein rsp0317 or rs05451 SWALL:Q8XT00 (EMBL:AL646078) (147 aa) fasta scores: E(): 4.5e-26, 59.09% id in 132 aa, and to Streptomyces coelicolor hypothetical protein sco7053 or sc4g1.19C SWALL:Q9FC31 (EMBL:AL939130) (139 aa) fasta scores: E(): 1e-11, 38.09% id in 126 aa; hypothetical protein complement(1518113..1518532) Burkholderia pseudomallei K96243 3096492 YP_111146.1 CDS fadH NC_006351.1 1518650 1520671 R Similar to Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] FadH or b3081 SWALL:FADH_ECOLI (SWALL:P42593) (671 aa) fasta scores: E(): 8.6e-165, 64.33% id in 673 aa, and to Streptomyces coelicolor 2,4-dienoyl-CoA reductase FadH or sco7066 or sc4g1.32 SWALL:Q9FC18 (EMBL:AL939130) (671 aa) fasta scores: E(): 1.8e-183, 71.32% id in 673 aa, and to Pseudomonas aeruginosa 2,4-dienoyl-Coareductase FadH1 or pa3092 SWALL:Q9HZB6 (EMBL:AE004733) (679 aa) fasta scores: E(): 6.1e-177, 68.64% id in 673 aa; possible alternative start site at codon 12; 2,4-dienoyl-CoA reductase complement(1518650..1520671) Burkholderia pseudomallei K96243 3095109 YP_111147.1 CDS BPSS1134 NC_006351.1 1520820 1521377 D Similar to Streptomyces coelicolor hypothetical protein sco7067 or sc4g1.33 SWALL:Q9FC17 (EMBL:AL939130) (183 aa) fasta scores: E(): 3.5e-36, 60.23% id in 171 aa, and to Ralstonia solanacearum hypothetical protein rsp0309 or rs05461 SWALL:Q8XT08 (EMBL:AL646077) (178 aa) fasta scores: E(): 1.6e-31, 57.23% id in 159 aa, and to Anabaena sp. hypothetical protein All4972 SWALL:Q8YMG2 (EMBL:AP003598) (179 aa) fasta scores: E(): 7.1e-18, 35.75% id in 179 aa; PadR-like family regulatory protein 1520820..1521377 Burkholderia pseudomallei K96243 3095702 YP_111148.1 CDS BPSS1135 NC_006351.1 1521595 1522425 D Similar to Salmonella typhimurium hydroxyethylthiazole kinase ThiM or stm2147 SWALL:THIM_SALTY (SWALL:P55883) (265 aa) fasta scores: E(): 1.2e-23, 44.53% id in 238 aa, and to Leptospira interrogans hydroxyethylthiazole kinase ThiM or la3365 SWALL:AAN50563 (EMBL:AE011496) (265 aa) fasta scores: E(): 8.7e-30, 43.65% id in 252 aa, and to Shigella flexneri hydoxyethylthiazole kinase ThiM or sf2166 SWALL:AAN43697 (EMBL:AE015232) (262 aa) fasta scores: E(): 4.4e-24, 42.56% id in 242 aa; hydroxyethylthioazole kinase 1521595..1522425 Burkholderia pseudomallei K96243 3095703 YP_111149.1 CDS BPSS1136 NC_006351.1 1522944 1523807 D Similar to Pseudomonas aeruginosa hypothetical protein Pa0187 SWALL:Q9I6U7 (EMBL:AE004456) (271 aa) fasta scores: E(): 1.9e-40, 46.41% id in 265 aa; hypothetical protein 1522944..1523807 Burkholderia pseudomallei K96243 3095072 YP_111150.1 CDS BPSS1137 NC_006351.1 1523922 1524809 D Similar to Pseudomonas aeruginosa hypothetical protein Pa0188 SWALL:Q9I6U6 (EMBL:AE004456) (293 aa) fasta scores: E(): 2.2e-48, 48.43% id in 287 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1735 SWALL:Q9I302 (EMBL:AE004599) (295 aa) fasta scores: E(): 2e-29, 37.2% id in 293 aa, and to Vibrio cholerae hypothetical protein Vc1229 vc1229 SWALL:Q9KSM7 (EMBL:AE004202) (291 aa) fasta scores: E(): 5.3e-16, 30.31% id in 287 aa; hypothetical protein 1523922..1524809 Burkholderia pseudomallei K96243 3094927 YP_111151.1 CDS BPSS1138 NC_006351.1 1525069 1525698 R Similar to Neisseria meningitidis hypothetical protein Nmb1992 nmb1992 SWALL:Q9JXK9 (EMBL:AE002548) (208 aa) fasta scores: E(): 5.7e-27, 44.82% id in 203 aa, and to Neisseria meningitidis hypothetical protein Nma0449 nma0449 SWALL:Q9JWC2 (EMBL:AL162753) (193 aa) fasta scores: E(): 5.5e-23, 51.8% id in 166 aa; hypothetical protein complement(1525069..1525698) Burkholderia pseudomallei K96243 3094928 YP_111152.1 CDS BPSS1139 NC_006351.1 1525846 1526103 R Similar to Alcaligenes eutrophus hypothetical protein SWALL:Q7WXA3 (EMBL:AY305378) (99 aa) fasta scores: E(): 2.2e-15, 64.28% id in 70 aa; hypothetical protein complement(1525846..1526103) Burkholderia pseudomallei K96243 3095668 YP_111153.1 CDS BPSS1140 NC_006351.1 1526486 1527448 D Similar to Ralstonia solanacearum hypothetical protein from codon 175 of rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 1.8e-11, 39.18% id in 148 aa, and to Ralstonia solanacearum hypothetical protein from codon 175 of rsc0184 or rs00615 SWALL:Q8Y2Z7 (EMBL:AL646057) (166 aa) fasta scores: E(): 1.7e-09, 34.5% id in 142 aa, and to Pseudomonas aeruginosa hypothetical protein from codon 175 of Pa3309 SWALL:Q9HYT5 (EMBL:AE004753) (151 aa) fasta scores: E(): 3.7e-09, 35.61% id in 146 aa, and to Corynebacterium glutamicum universal stress protein UspA and related nucleotide-binding proteins cgl2943 SWALL:BAC00337 (EMBL:AP005283) (301 aa) fasta scores: E(): 2.2e-08, 28.3% id in 318 aa; universal stress family protein 1526486..1527448 Burkholderia pseudomallei K96243 3096954 YP_111154.1 CDS BPSS1141 NC_006351.1 1527667 1528083 R hypothetical protein complement(1527667..1528083) Burkholderia pseudomallei K96243 3096955 YP_111155.1 CDS BPSS1142 NC_006351.1 1528514 1529032 R Similar to Methanobacterium thermoautotrophicum hydrogenase small subunit EhaN SWALL:Q9UXP5 (EMBL:AJ243655) (148 aa) fasta scores: E(): 4.7e-17, 43.44% id in 122 aa, and to Methanosarcina mazei formate hydrogenlyase subunit 7 mm1064 SWALL:AAM30760 (EMBL:AE013333) (170 aa) fasta scores: E(): 2.7e-26, 54.96% id in 131 aa, and to Methanosarcina acetivorans hydrogenase-3, subunit G ma4373 SWALL:Q8THY5 (EMBL:AE011156) (170 aa) fasta scores: E(): 5.6e-26, 52.48% id in 141 aa; hydrogenase/oxidoreductase subunit complement(1528514..1529032) Burkholderia pseudomallei K96243 3094973 YP_111156.1 CDS BPSS1143 NC_006351.1 1529032 1530687 R Similar to Escherichia coli formate hydrogenlyase subunit 5 precursor HycE or HevE or b2721 SWALL:HYCE_ECOLI (SWALL:P16431) (569 aa) fasta scores: E(): 2.5e-31, 31.25% id in 464 aa, and to Methanosarcina acetivorans hydrogenase-3, subunit E ma4372 SWALL:Q8THY6 (EMBL:AE011156) (545 aa) fasta scores: E(): 9.1e-42, 38.47% id in 473 aa, and to Mycobacterium tuberculosis probable formate hydrogenlyase cy251.05 rv0087 or mtcy251.05 SWALL:Q10884 (EMBL:Z74410) (492 aa) fasta scores: E(): 1.4e-39, 42.22% id in 450 aa; formate hydrogenlyase/hydrogenase/NADH dehydrogenase subunit complement(1529032..1530687) Burkholderia pseudomallei K96243 3095226 YP_111157.1 CDS BPSS1144 NC_006351.1 1530760 1532220 R Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase 4 subunit F complement(1530760..1532220) Burkholderia pseudomallei K96243 3095227 YP_111158.1 CDS BPSS1145 NC_006351.1 1532213 1532872 R Similar to Mycobacterium tuberculosis hypothetical protein rv0085 or mt0092 or mtcy251.03 SWALL:Y085_MYCTU (SWALL:Q10882) (220 aa) fasta scores: E(): 4e-18, 32.07% id in 212 aa, and to Thermoanaerobacter tengcongensis hydrogenase 4 membrane subunit tte1704 SWALL:Q8R9B2 (EMBL:AE013124) (204 aa) fasta scores: E(): 5.4e-11, 25% id in 204 aa, and to Escherichia coli, and Escherichia coli O157:H7 hydrogenase-4 component E HyfE or b2485 or z3745 or ecs3347 SWALL:HYFE_ECOLI (SWALL:P77524) (216 aa) fasta scores: E(): 2.5e-09, 25.58% id in 215 aa; hypothetical protein complement(1532213..1532872) Burkholderia pseudomallei K96243 3095426 YP_111159.1 CDS BPSS1146 NC_006351.1 1532873 1533823 R Similar to Escherichia coli formate hydrogenlyase subunit 4 HycD or HevD or b2722 SWALL:HYCD_ECOLI (SWALL:P16430) (307 aa) fasta scores: E(): 2.6e-27, 33.65% id in 306 aa. Almost identical to the previously sequenced Burkholderia pseudomallei formate hydrogenlyase subunit 4 SWALL:Q9ALX9 (EMBL:AF335723) (316 aa) fasta scores: E(): 2.9e-114, 98.73% id in 316 aa; formate hydrogenlyase subunit 4 complement(1532873..1533823) Burkholderia pseudomallei K96243 3096915 YP_111160.1 CDS BPSS1147 NC_006351.1 1533817 1535823 R Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase 4 subunit B complement(1533817..1535823) Burkholderia pseudomallei K96243 3096916 YP_111161.1 CDS BPSS1148 NC_006351.1 1536182 1536955 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0353 or rs00757 SWALL:Q8XSW4 (EMBL:AL646078) (247 aa) fasta scores: E(): 5.1e-58, 63.74% id in 251 aa, and to Xanthomonas axonopodis hypothetical protein Xac1754 SWALL:AAM36618 (EMBL:AE011807) (233 aa) fasta scores: E(): 2.6e-06, 33.47% id in 230 aa, and to Ralstonia solanacearum permease transmembrane protein rsc0238 or rs00670 SWALL:Q8Y2U4 (EMBL:AL646058) (236 aa) fasta scores: E(): 3.5e-06, 31.53% id in 222 aa; hypothetical protein 1536182..1536955 Burkholderia pseudomallei K96243 3096817 YP_111162.1 CDS BPSS1149 NC_006351.1 1537182 1537679 D hypothetical protein 1537182..1537679 Burkholderia pseudomallei K96243 3094963 YP_111163.1 CDS BPSS1150 NC_006351.1 1537737 1537997 D Similar to Alcaligenes eutrophus phosphocarrier protein Hpr phbH SWALL:PTHP_ALCEU (SWALL:P23537) (89 aa) fasta scores: E(): 4.2e-05, 39.13% id in 69 aa, and to Ralstonia solanacearum probable phosphocarrier protein Hpr PstH or rsc0347 or rs03314 SWALL:Q8Y2I9 (EMBL:AL646058) (89 aa) fasta scores: E(): 9.4e-05, 38.37% id in 86 aa; phosphocarrier protein 1537737..1537997 Burkholderia pseudomallei K96243 3094964 YP_111164.1 CDS BPSS1151 NC_006351.1 1537994 1538848 D Similar to Pseudomonas aeruginosa spermidine synthase SpeE or pa1687 SWALL:SPEE_PSEAE (SWALL:Q9X6R0) (286 aa) fasta scores: E(): 1.9e-06, 27.95% id in 254 aa, and to Xanthomonas campestris transferase xcc1548 SWALL:AAM40843 (EMBL:AE012255) (247 aa) fasta scores: E(): 1e-24, 43.19% id in 213 aa, and to Neisseria meningitidis transferase nma1087 or nmb0869 SWALL:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.7e-20, 34.15% id in 243 aa; spermidine synthase 1537994..1538848 Burkholderia pseudomallei K96243 3095263 YP_111165.1 CDS BPSS1152 NC_006351.1 1538955 1539173 D CopG family transcriptional regulator 1538955..1539173 Burkholderia pseudomallei K96243 3095073 YP_111166.1 CDS BPSS1153 NC_006351.1 1539214 1539540 D hypothetical protein 1539214..1539540 Burkholderia pseudomallei K96243 3095074 YP_111167.1 CDS narK NC_006351.1 1539545 1540819 R Similar to Paracoccus pantotrophus nitrate/nitrite transporter NarK SWALL:Q93PW1 (EMBL:AF295359) (905 aa) fasta scores: E(): 4.5e-63, 41.2% id in 415 aa, and to Pseudomonas fluorescens nitrate/nitrite transporter narD SWALL:Q9F0X9 (EMBL:AF197465) (421 aa) fasta scores: E(): 1.6e-89, 56.46% id in 402 aa, and to Ralstonia solanacearum nitrite/nitrate transporter transmembrane protein NarK1 or rsp0972 or rs02304 SWALL:Q8XR87 (EMBL:AL646082) (437 aa) fasta scores: E(): 4.3e-85, 53.44% id in 421 aa, and to Pseudomonas aeruginosa nitrate extrusion protein NarK1 or pa3877 SWALL:O54041 (EMBL:Y15252) (431 aa) fasta scores: E(): 6.4e-71, 44.36% id in 408 aa; nitrate/nitrite transporter complement(1539545..1540819) Burkholderia pseudomallei K96243 3095405 YP_111168.1 CDS BPSS1155 NC_006351.1 1540844 1541641 R Similar to Azotobacter vinelandii protein NifM SWALL:NIFM_AZOVI (SWALL:P14890) (292 aa) fasta scores: E(): 1.9e-09, 29.71% id in 212 aa, and to Pseudomonas aeruginosa probable peptidyl-prolyl cis-trans isomerase, Ppic-type pa3871 SWALL:Q9HXD5 (EMBL:AE004804) (272 aa) fasta scores: E(): 1.5e-23, 36.33% id in 267 aa, and to Brucella melitensis peptidyl-prolyl cis-trans isomerase C bmeii0954 SWALL:Q8YBE6 (EMBL:AE009728) (271 aa) fasta scores: E(): 4.7e-23, 43.07% id in 260 aa, and to Pseudomonas aeruginosa NifM protein SWALL:O54047 (EMBL:Y15252) (250 aa) fasta scores: E(): 7e-22, 36.94% id in 249 aa; rotamase/peptidyl-prolyl cis-trans isomerase complement(1540844..1541641) Burkholderia pseudomallei K96243 3096895 YP_111169.1 CDS narI NC_006351.1 1541661 1542344 R Similar to Escherichia coli respiratory nitrate reductase 1 gamma chain NarI or ChlI or b1227 SWALL:NARI_ECOLI (SWALL:P11350) (225 aa) fasta scores: E(): 9.9e-38, 46.42% id in 224 aa, and to Brucella melitensis respiratory nitrate reductase 2 gamma chain bmeii0953 SWALL:Q8YBE7 (EMBL:AE009728) (241 aa) fasta scores: E(): 6e-43, 51.52% id in 229 aa, and to Brucella suis respiratory nitrate reductase, gamma subunit NarI or bra0296 SWALL:AAN33496 (EMBL:AE014530) (241 aa) fasta scores: E(): 6.9e-43, 51.52% id in 229 aa, and to Salmonella typhimurium nitrate reductase 1, cytochrome b NarI or stm1761 SWALL:Q8ZP40 (EMBL:AE008778) (225 aa) fasta scores: E(): 3.5e-38, 46.42% id in 224 aa; respiratory nitrate reductase subunit complement(1541661..1542344) Burkholderia pseudomallei K96243 3095414 YP_111170.1 CDS narJ NC_006351.1 1542512 1543201 R Similar to Paracoccus denitrificans respiratory nitrate reductase subunit protein NarJ SWALL:Q56356 (EMBL:Z26255) (228 aa) fasta scores: E(): 9.5e-25, 47.17% id in 212 aa, and to Ralstonia solanacearum respiratory nitrate reductase oxidoreductase NarJ or rsp0976 or rs02308 SWALL:Q8XR83 (EMBL:AL646082) (226 aa) fasta scores: E(): 2.2e-23, 41.7% id in 223 aa, and to Pseudomonas aeruginosa chaperone NarJ or pa3873 SWALL:O54045 (EMBL:Y15252) (246 aa) fasta scores: E(): 4.7e-23, 44.95% id in 218 aa; respiratory nitrate reductase subunit complement(1542512..1543201) Burkholderia pseudomallei K96243 3095404 YP_111171.1 CDS narH NC_006351.1 1543198 1544727 R Similar to Paracoccus denitrificans nitrate reductase subunit NarH protein SWALL:Q56355 (EMBL:Z26255) (505 aa) fasta scores: E(): 8.3e-156, 73.82% id in 489 aa, and to Brucella melitensis nitrate reductase beta chain BmeII0951 SWALL:Q8YBE9 (EMBL:AE009728) (512 aa) fasta scores: E(): 1.6e-165, 76.11% id in 494 aa, and to Pseudomonas aeruginosa respiratory nitrate reductase beta subunit NarH or pa3874 SWALL:O54044 (EMBL:Y15252) (513 aa) fasta scores: E(): 3.3e-158, 75.54% id in 503 aa, and to Pseudomonas fluorescens respiratory nitrate reductase beta subunit NarH SWALL:Q9F0X6 (EMBL:AF197465) (512 aa) fasta scores: E(): 6.5e-157, 73.65% id in 501 aa; respiratory nitrate reductase subunit complement(1543198..1544727) Burkholderia pseudomallei K96243 3097251 YP_111172.1 CDS narG NC_006351.1 1544724 1548527 R Similar to Escherichia coli respiratory nitrate reductase 2 alpha chain NarZ or b1468 SWALL:NARZ_ECOLI (SWALL:P19319) (1245 aa) fasta scores: E(): 0, 67.6% id in 1244 aa, and to Paracoccus halodenitrificans probable nitrate reductase alpha subunit NarG SWALL:Q8VUK0 (EMBL:AB076402) (1255 aa) fasta scores: E(): 0, 68.63% id in 1256 aa, and to Pseudomonas aeruginosa respiratory nitrate reductase alpha subunit NarG or pa3875 SWALL:O54043 (EMBL:Y15252) (1261 aa) fasta scores: E(): 0, 67.68% id in 1247 aa, and to Salmonella typhimurium nitrate reductase 2, alpha subunit NarZ or stm1577 SWALL:Q8ZPE1 (EMBL:AE008769) (1246 aa) fasta scores: E(): 0, 68.37% id in 1246 aa; respiratory nitrate reductase subunit complement(1544724..1548527) Burkholderia pseudomallei K96243 3097250 YP_111173.1 CDS BPSS1160 NC_006351.1 1549297 1551264 D Similar to Bacillus subtilis sensor protein DegS or SacU SWALL:DEGS_BACSU (SWALL:P13799) (385 aa) from codon 330 fasta scores: E(): 5.1e-18, 29.48% id in 329 aa, and to Ralstonia solanacearum probable transmembrane two component system sensor kinase transcription regulator protein rsc0191 or rs00623 from codon 202 SWALL:Q8Y2Z0 (EMBL:AL646057) (458 aa) fasta scores: E(): 4.3e-49, 49.12% id in 458 aa. No transmembrane regions are predicted.; sensor kinase 1549297..1551264 Burkholderia pseudomallei K96243 3096102 YP_111174.1 CDS BPSS1161 NC_006351.1 1551261 1551908 D Similar to Ralstonia solanacearum EPS/virulence gene regulator VsrD SWALL:Q45416 (EMBL:U18135) (210 aa) fasta scores: E(): 3.3e-31, 48.09% id in 210 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc0192 or rs00624 SWALL:Q8Y2Y9 (EMBL:AL646057) (215 aa) fasta scores: E(): 2.2e-45, 59.07% id in 215 aa, and to Ralstonia solanacearum response regulator transcription regulator protein VsrD or rsc0292 or rs03259 SWALL:Q8Y2P3 (EMBL:AL646058) (210 aa) fasta scores: E(): 3.3e-31, 48.09% id in 210 aa; response regulator protein 1551261..1551908 Burkholderia pseudomallei K96243 3096103 YP_111175.1 CDS BPSS1162 NC_006351.1 1552463 1552873 D Similar to Ralstonia solanacearum (pseudomonas solanacearum) virulence regulator VsrD SWALL:Q45417 (EMBL:U18135) (146 aa) fasta scores: E(): 9.5e-07, 31.2% id in 125 aa, and to Ralstonia solanacearum transcription regulator protein rsc0291 or rs03258 SWALL:Q8Y2P4 (EMBL:AL646058) (146 aa) fasta scores: E(): 1.1e-06, 31.2% id in 125 aa, and to Rhodococcus sp. NO1-1 CprR SWALL:O85372 (EMBL:AF064700) (212 aa) fasta scores: E(): 2.2e-05, 35.87% id in 131 aa; response regulator receiver domain-containing protein 1552463..1552873 Burkholderia pseudomallei K96243 3095423 YP_111176.1 CDS BPSS1163 NC_006351.1 1552886 1553665 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 fumarate and nitrate reduction regulatory protein FNR or NirR or b1334 or c1807 or z2433 or ecs1915 SWALL:FNR_ECOLI (SWALL:P03019) (250 aa) fasta scores: E(): 5.1e-36, 39.41% id in 241 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0190 or rs00622 SWALL:Q8Y2Z1 (EMBL:AL646057) (266 aa) fasta scores: E(): 3.6e-47, 48.65% id in 261 aa, and to Neisseria meningitidis anaerobic transcriptional regulatory protein nma2107 or nmb0380 SWALL:Q9JQQ8 (EMBL:AL162758) (244 aa) fasta scores: E(): 6.9e-43, 50.46% id in 216 aa; fumarate/nitrate reduction family regulatory protein 1552886..1553665 Burkholderia pseudomallei K96243 3096763 YP_111177.1 CDS BPSS1164 NC_006351.1 1554050 1555702 R Similar to Xanthomonas axonopodis hypothetical protein Xac0753 SWALL:AAM35642 (EMBL:AE011705) (526 aa) fasta scores: E(): 1e-41, 37.03% id in 513 aa, and to Xanthomonas campestris hypothetical protein Xcc0700 SWALL:AAM40016 (EMBL:AE012168) (525 aa) fasta scores: E(): 1.2e-41, 36.07% id in 510 aa; hypothetical protein complement(1554050..1555702) Burkholderia pseudomallei K96243 3096764 YP_111178.1 CDS BPSS1165 NC_006351.1 1556400 1557245 D Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD or b0368 SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 1.4e-22, 30.1% id in 279 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 1.7e-31, 36.2% id in 279 aa, and to Ralstonia solanacearum alpha-ketoglutarate-dependent taurine dioxygenase oxidoreductase TauD or rsc0746 or rs05107 SWALL:Q8Y1E4 (EMBL:AL646060) (301 aa) fasta scores: E(): 4.8e-31, 39.43% id in 284 aa; alpha-ketoglutarate-dependent taurine dioxygenase 1556400..1557245 Burkholderia pseudomallei K96243 3097049 YP_111179.1 CDS BPSS1166 NC_006351.1 1557496 1558746 R Similar to Yersinia pestis multidrug resistance protein ypo2148 or y2173 SWALL:Q8ZEL6 (EMBL:AJ414151) (400 aa) fasta scores: E(): 4e-21, 26.34% id in 372 aa, and to Escherichia coli florfenicol exporter FloR SWALL:Q9F8W2 (EMBL:AF231986) (404 aa) fasta scores: E(): 1.4e-20, 27.82% id in 399 aa, and to Vibrio cholerae Florfenicol exporter FloR SWALL:Q8VVN0 (EMBL:AY034138) (404 aa) fasta scores: E(): 1.4e-20, 27.82% id in 399 aa, and to Bacillus subtilis bicyclomycin resistance protein YdgK SWALL:P96709 (EMBL:AB001488) (402 aa) fasta scores: E(): 1.6e-20, 23.69% id in 384 aa; transport/efflux protein complement(1557496..1558746) Burkholderia pseudomallei K96243 3094979 YP_111180.1 CDS BPSS1167 NC_006351.1 1558802 1559686 R C-terminal region is similar to Streptomyces avermitilis thioesterase PteH SWALL:Q93H75 (EMBL:AB070949) (255 aa) fasta scores: E(): 2.8e-23, 36.28% id in 226 aa, and Clostridium acetobutylicum thioesterase II of alpha/beta hydrolase superfamily cac1022 SWALL:Q97K97 (EMBL:AE007618) (253 aa) fasta scores: E(): 2.9e-24, 35.34% id in 215 aa. Possible alternative translational start site; thioesterase complement(1558802..1559686) Burkholderia pseudomallei K96243 3094980 YP_111181.1 CDS BPSS1168 NC_006351.1 1559667 1560512 R Similar to Corynebacterium glutamicum hypothetical protein Cgl0569 SWALL:BAB97962 (EMBL:AP005275) (152 aa) fasta scores: E(): 4.7e-11, 34.69% id in 147 aa, and to Anabaena sp. hypothetical protein All0878 SWALL:Q8YYH2 (EMBL:AP003583) (272 aa) fasta scores: E(): 9e-11, 27.67% id in 271 aa, and to Streptomyces coelicolor acetyltransferase sco7150 or sc9a4.12C SWALL:Q9FBU1 (EMBL:AL939130) (278 aa) fasta scores: E(): 2.1e-07, 31.33% id in 233 aa; acetyltransferase complement(1559667..1560512) Burkholderia pseudomallei K96243 3095975 YP_111182.1 CDS BPSS1169 NC_006351.1 1560517 1562109 R Similar to Anabaena sp. polyketide synthase all2641 SWALL:Q8YTS2 (EMBL:AP003590) (1019 aa) fasta scores: E(): 1.8e-80, 42.77% id in 533 aa, and to Ralstonia solanacearum hypothetical protein rsp0639 or rs03728 SWALL:Q8XS42 (EMBL:AL646079) (537 aa) fasta scores: E(): 9.7e-77, 41.23% id in 519 aa, and to Streptomyces verticillus hypothetical 59.7 kDa protein SWALL:Q9AG77 (EMBL:AF340166) (544 aa) fasta scores: E(): 9.4e-50, 42.08% id in 537 aa; hypothetical protein complement(1560517..1562109) Burkholderia pseudomallei K96243 3095811 YP_111183.1 CDS BPSS1170 NC_006351.1 1562122 1564590 R Similar to Polyangium cellulosum polyketide synthase EpoB SWALL:Q9L8C8 (EMBL:AF210843) (1832 aa) fasta scores: E(): 2.2e-74, 42.47% id in 664 aa, and to Polyangium cellulosum EpoC SWALL:Q9KIZ8 (EMBL:AF217189) (1832 aa) fasta scores: E(): 9.3e-74, 42.16% id in 664 aa, and to Nostoc sp. GSV224 NosB SWALL:Q9RAH3 (EMBL:AF204805) (1244 aa) fasta scores: E(): 9.1e-73, 45.99% id in 524 aa; non-ribosomal peptide synthase/polyketide synthase complement(1562122..1564590) Burkholderia pseudomallei K96243 3095812 YP_111184.1 CDS BPSS1171 NC_006351.1 1564571 1568047 R Similar to Anabaena sp. 90 peptide synthetase AdpA SWALL:Q9K5M2 (EMBL:AJ269505) (2258 aa) fasta scores: E(): 2.2e-72, 29.05% id in 1084 aa, and to Ralstonia solanacearum probable peptide synthetase rsp0642 or rs05859 SWALL:Q8XS39 (EMBL:AL646079) (5953 aa) fasta scores: E(): 1e-66, 33.39% id in 1069 aa, and to Myxococcus xanthus saframycin mx1 synthetase B SafB SWALL:Q50857 (EMBL:U24657) (1770 aa) fasta scores: E(): 4.3e-61, 39.62% id in 593 aa; non-ribosomal peptide synthase/polyketide synthase complement(1564571..1568047) Burkholderia pseudomallei K96243 3097220 YP_111185.1 CDS BPSS1172 NC_006351.1 1568087 1572076 R Similar to Polyangium cellulosum polyketide synthase EpoC SWALL:Q9KIZ8 (EMBL:AF217189) (1832 aa) fasta scores: E(): 1.7e-90, 46.7% id in 576 aa, and to Polyangium cellulosum polyketide synthase EpoB SWALL:Q9L8C8 (EMBL:AF210843) (1832 aa) fasta scores: E(): 2.2e-90, 46.52% id in 576 aa, and to Stigmatella aurantiaca MtaD SWALL:Q9RFK8 (EMBL:AF188287) (3291 aa) fasta scores: E(): 2.5e-89, 48.97% id in 537 aa; non-ribosomal peptide synthase/polyketide synthase complement(1568087..1572076) Burkholderia pseudomallei K96243 3096448 YP_111186.1 CDS BPSS1173 NC_006351.1 1572069 1576661 R Similar to Streptomyces verticillus polyketide synthase BlmVIII SWALL:Q9FB25 (EMBL:AF210249) (1841 aa) fasta scores: E(): 9.9e-99, 37.09% id in 1143 aa, and to Streptomyces natalensis PimS4 protein Pims4 SWALL:Q9EWA3 (EMBL:AJ278573) (2024 aa) fasta scores: E(): 1.1e-79, 29.41% id in 1785 aa, and to Streptomyces avermitilis modular polyketide synthase PteA5 SWALL:Q93H83 (EMBL:AB070949) (3352 aa) fasta scores: E(): 1.2e-78, 30.65% id in 1579 aa; non-ribosomal peptide/polyketide synthase complement(1572069..1576661) Burkholderia pseudomallei K96243 3096449 YP_111187.1 CDS BPSS1174 NC_006351.1 1576669 1581285 R Similar to Agrobacterium tumefaciens non-ribosomal peptide synthetase MtaD or atu3682 or agr_l_2311 SWALL:Q8U9P4 (EMBL:AE009297) (2399 aa) fasta scores: E(): 7.7e-68, 31.58% id in 1086 aa, and to Xanthomonas campestris ATP-dependent serine activating enzyme EntF or xcc3867 SWALL:AAM43098 (EMBL:AE012507) (1326 aa) fasta scores: E(): 5.3e-67, 31.43% id in 1056 aa, and to Xanthomonas axonopodis ATP-dependent serine activating enzyme EntF or xac3922 SWALL:AAM38759 (EMBL:AE012041) (1332 aa) fasta scores: E(): 4e-66, 29.34% id in 1261 aa; non-ribosomal peptide/polyketide synthase complement(1576669..1581285) Burkholderia pseudomallei K96243 3096286 YP_111188.1 CDS BPSS1175 NC_006351.1 1581480 1583549 D Similar to Salmonella typhimurium oligopeptidase A PrlC or OpdA or OptA or stm3594 SWALL:OPDA_SALTY (SWALL:P27237) (680 aa) fasta scores: E(): 8e-99, 39.85% id in 685 aa, and to Ralstonia solanacearum probable oligopeptidase A PrlC or rsc1595 or rs03957 SWALL:Q8XZ11 (EMBL:AL646065) (706 aa) fasta scores: E(): 4.5e-124, 47.51% id in 684 aa, and to Xanthomonas campestris oligopeptidase A PrlC or xcc0580 SWALL:AAM39896 (EMBL:AE012156) (674 aa) fasta scores: E(): 3.5e-109, 44.47% id in 688 aa; oligopeptidase A 1581480..1583549 Burkholderia pseudomallei K96243 3096908 YP_111189.1 CDS BPSS1176 NC_006351.1 1584110 1584814 D Similar to Ralstonia solanacearum transcriptional activator protein SolR SWALL:SLR2_RALSO (SWALL:O30919) (236 aa) fasta scores: E(): 5.1e-31, 41.02% id in 234 aa, and to Ralstonia solanacearum probable transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein rsp0778 or rs01929 SWALL:Q8XRQ3 (EMBL:AL646080) (248 aa) fasta scores: E(): 4e-32, 40.08% id in 237 aa, and to Ralstonia solanacearum transcriptional activator protein SolR or rsc3287 or rs02516 SWALL:SLR1_RALSO (SWALL:P58590) (236 aa) fasta scores: E(): 3.2e-31, 40.88% id in 225 aa; N-acyl-homoserine lactone dependent regulatory protein 1584110..1584814 Burkholderia pseudomallei K96243 3096909 YP_111190.1 CDS BPSS1177 NC_006351.1 1584931 1585788 R Weakly similar to an internal reion of Pseudomonas syringae thioesterase SyrC SWALL:Q52401 (EMBL:U25130) (433 aa) fasta scores: E(): 7.1e-07, 23.93% id in 259 aa; hypothetical protein complement(1584931..1585788) Burkholderia pseudomallei K96243 3095055 YP_111191.1 CDS BPSS1178 NC_006351.1 1585839 1587188 R Similar to Bacillus cereus antiporter GerN SWALL:Q9KI10 (EMBL:AF246294) (387 aa) fasta scores: E(): 3.9e-12, 28.85% id in 402 aa, and to Streptomyces viridochromogenes transporter AviJ SWALL:Q93KW8 (EMBL:AF333038) (476 aa) fasta scores: E(): 2.5e-38, 33.4% id in 452 aa, and to Nocardia aerocolonigenes membrane transporter protein rebG SWALL:CAC93721 (EMBL:AB090952) (426 aa) fasta scores: E(): 8.8e-36, 35.89% id in 404 aa; transmembrane antiporter Na+ or K+/H+ exchanger complement(1585839..1587188) Burkholderia pseudomallei K96243 3095545 YP_111192.1 CDS BPSS1179 NC_006351.1 1587668 1588111 D hypothetical protein 1587668..1588111 Burkholderia pseudomallei K96243 3095546 YP_111193.1 CDS BPSS1180 NC_006351.1 1588194 1588814 D Similar to Burkholderia pseudomallei acyl homoserine lactone synthase BpsI SWALL:AAM21707 (EMBL:AF501236) (203 aa) fasta scores: E(): 1.4e-32, 48.7% id in 193 aa, and to Burkholderia cepacia AHL synthase CepI SWALL:Q9AM55 (EMBL:AF330014) (202 aa) fasta scores: E(): 8.6e-35, 47.8% id in 205 aa; N-acylhomoserine lactone synthase 1588194..1588814 Burkholderia pseudomallei K96243 3095128 YP_111194.1 CDS BPSS1181 NC_006351.1 1588883 1590400 D Similar to Streptomyces pristinaespiralis pristinamycin I synthase I SnbC SWALL:Q54959 (EMBL:X98690) (2591 aa) fasta scores: E(): 6.9e-60, 41.81% id in 507 aa, and to Anabaena sp. hypothetical protein All1695 SWALL:Q8YWC0 (EMBL:AP003586) (1449 aa) fasta scores: E(): 4.5e-62, 41.42% id in 507 aa; surfactin/non-ribosomally encoded peptide/polyketide synthase 1588883..1590400 Burkholderia pseudomallei K96243 3094918 YP_111195.1 CDS BPSS1182 NC_006351.1 1590397 1590636 D Similar to the region of Escherichia coli enterobactin synthetase component F EntF or b0586 in which the acyl carrier protein (ACP) is encoded SWALL:ENTF_ECOLI (SWALL:P11454) (1293 aa) fasta scores: E(): 5.7, 40% id in 50 aa, and to Bacillus subtilis peptide synthetase 1 PpsA or Pps1 SWALL:PPS1_BACSU (SWALL:P39845) (2561 aa) fasta scores: E(): 5.4, 38.46% id in 52 aa, and to; acyl carrier protein 1590397..1590636 Burkholderia pseudomallei K96243 3094919 YP_111196.1 CDS BPSS1183 NC_006351.1 1590782 1591705 D Similar to Pseudomonas syringae syringomycin biosynthesis enzyme 2 Syrb2 SWALL:Q9RBY6 (EMBL:U25130) (310 aa) fasta scores: E(): 4.5e-72, 53.61% id in 304 aa, and to Pseudomonas syringae CmaB SWALL:O50472 (EMBL:U14657) (262 aa) fasta scores: E(): 1.9e-55, 53.93% id in 267 aa; non-ribosomally encoded peptide/polyketide synthase 1590782..1591705 Burkholderia pseudomallei K96243 3094908 YP_111197.1 CDS BPSS1184 NC_006351.1 1591796 1592092 D Poor database matches. Similar to an internal region of Streptomyces sp. MA6548 FK506 peptide synthetase fkbP SWALL:Q9ZGA6 (EMBL:AF082100) (1504 aa) fasta scores: E(): 0.59, 31.18% id in 93 aa. Possible gene remnant; hypothetical protein 1591796..1592092 Burkholderia pseudomallei K96243 3096269 YP_111198.1 CDS BPSS1185a NC_006351.1 1592930 1593055 D Poor database matches. Weakly similar to Acinetobacter calcoaceticus p-hydroxybenzoate hydroxylase transcriptional activator pobR SWALL:POBR_ACICA (SWALL:Q43992) (271 aa) fasta scores: E(): 1.1, 40% id in 40 aa; hypothetical protein 1592930..1593055 Burkholderia pseudomallei K96243 3096470 YP_111199.1 CDS BPSS1187 NC_006351.1 1593544 1594350 D hypothetical protein 1593544..1594350 Burkholderia pseudomallei K96243 3095129 YP_111200.1 CDS BPSS1190 NC_006351.1 1597242 1598189 R Similar to Bacillus halodurans hypothetical protein Bh0875 SWALL:Q9KEH7 (EMBL:AP001510) (335 aa) fasta scores: E(): 3.3e-20, 32.01% id in 328 aa, and to Bacillus subtilis hypothetical protein YwcH or ipa-44D SWALL:YWCH_BACSU (SWALL:P39606) (333 aa) fasta scores: E(): 7.4e-18, 36.17% id in 235 aa, and to Brucella melitensis alkanal monooxygenase alpha chain Bmei0894 SWALL:Q8YHA8 (EMBL:AE009530) (327 aa) fasta scores: E(): 2.2e-17, 32.42% id in 330 aa; monooxygenase complement(1597242..1598189) Burkholderia pseudomallei K96243 3097212 YP_111201.1 CDS BPSS1191 NC_006351.1 1598201 1599265 R Similar to Rhizobium leguminosarum 1-aminocyclopropane-1-carboxylate deaminase AcdS SWALL:Q93AG0 (EMBL:AF421376) (339 aa) fasta scores: E(): 2.4e-07, 25.77% id in 291 aa, and to Escherichia coli 1-aminocyclopropane-1-carboxylate deaminase YedO or b1919 SWALL:1A1D_ECOLI (SWALL:P76316) (328 aa) fasta scores: E(): 4.5e-15, 29.58% id in 311 aa, and to Salmonella typhimurium 1-cyclopropane-carboxylate deaminase YedO or stm1953 SWALL:Q8ZNT7 (EMBL:AE008786) (328 aa) fasta scores: E(): 4.5e-15, 29.8% id in 302 aa; 1-aminocyclopropane-1-carboxylate deaminase complement(1598201..1599265) Burkholderia pseudomallei K96243 3096629 YP_111202.1 CDS BPSS1192 NC_006351.1 1599262 1600587 R hypothetical protein complement(1599262..1600587) Burkholderia pseudomallei K96243 3097230 YP_111203.1 CDS BPSS1193 NC_006351.1 1600584 1605287 R N-terminus similar to Anabaena sp. 90 peptide synthetase AdpB SWALL:Q9K5M1 (EMBL:AJ269505) (5060 aa) fasta scores: E(): 1e-130, 33.65% id in 1539 aa, and N-terminus similar to Nostoc sp. GSV224 NosD SWALL:Q9RAH1 (EMBL:AF204805) (2450 aa) fasta scores: E(): 3.7e-117, 32.26% id in 1559 aa, and N-terminus similar to Bradyrhizobium japonicum Id930 SWALL:Q9AMR5 (EMBL:AF322013) (3310 aa) fasta scores: E(): 1.4e-110, 36.09% id in 1305 aa; non-ribosomal peptide/polyketide synthase complement(1600584..1605287) Burkholderia pseudomallei K96243 3097231 YP_111204.1 CDS BPSS1194 NC_006351.1 1605305 1607986 R C-terminus is similar to Stigmatella aurantiaca peptide synthase/polyketide synthase MtaG SWALL:Q9RFK5 (EMBL:AF188287) (1750 aa) fasta scores: E(): 5.9e-68, 39.81% id in 648 aa, and to Mycobacterium smegmatis peptide synthase/polyketide synthas FxbC SWALL:O87314 (EMBL:AF027770) (4976 aa) fasta scores: E(): 1e-67, 42.6% id in 629 aa; peptide synthase/polyketide synthase complement(1605305..1607986) Burkholderia pseudomallei K96243 3096934 YP_111205.1 CDS BPSS1195 NC_006351.1 1608005 1609315 R Similar to the N-terminus of Streptomyces verticillus peptide synthetase NRPS9-8 BlmX SWALL:Q9FB27 (EMBL:AF210249) (2162 aa) fasta scores: E(): 2.5e-11, 29.57% id in 470 aa, and to the N-terminus of Pseudomonas aeruginosa probable non-ribosomal peptide synthetase pa2302 SWALL:Q9I1H3 (EMBL:AE004656) (2124 aa) fasta scores: E(): 6.1e-10, 30.9% id in 466 aa; non-ribosomal peptide synthase complement(1608005..1609315) Burkholderia pseudomallei K96243 3096154 YP_111206.1 CDS BPSS1196 NC_006351.1 1609312 1610373 R Similar to Pseudomonas syringae syringomycin biosynthesis enzyme SyrP SWALL:P97053 (EMBL:U88574) (353 aa) fasta scores: E(): 9.3e-40, 36.39% id in 349 aa; SyrP-like protein complement(1609312..1610373) Burkholderia pseudomallei K96243 3096155 YP_111207.1 CDS BPSS1197 NC_006351.1 1610399 1619863 R Similar to central portion of Ralstonia solanacearum probable peptide synthetase rsp0641 or rs05860 SWALL:Q8XS40 (EMBL:AL646079) (6889 aa) fasta scores: E(): 1.4e-124, 33.62% id in 3396 aa, and to N-terminus of Stigmatella aurantiaca StiC protein SWALL:Q8RJY4 (EMBL:AJ421825) (1885 aa) fasta scores: E(): 3.5e-95, 41.69% id in 933 aa, and to N-terminus of Stigmatella aurantiaca StiB protein SWALL:Q8RJY5 (EMBL:AJ421825) (1585 aa) fasta scores: E(): 1.3e-91, 36.35% id in 1268 aa; non-ribosomal peptide synthase complement(1610399..1619863) Burkholderia pseudomallei K96243 3096534 YP_111208.1 CDS BPSS1198 NC_006351.1 1619864 1620622 R hypothetical protein complement(1619864..1620622) Burkholderia pseudomallei K96243 3096535 YP_111209.1 CDS BPSS1199 NC_006351.1 1620659 1620922 R hypothetical protein complement(1620659..1620922) Burkholderia pseudomallei K96243 3095762 YP_111210.1 CDS BPSS1200 NC_006351.1 1621547 1623028 D Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 1.6e-40, 37.79% id in 471 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0268 SWALL:Q9I6M2 (EMBL:AE004465) (473 aa) fasta scores: E(): 6.5e-75, 54.37% id in 491 aa, and to Anabaena sp. transcriptional regulator alr4738 SWALL:Q8YN32 (EMBL:AP003597) (490 aa) fasta scores: E(): 4e-53, 39.17% id in 485 aa; GntR family transcriptional regulator 1621547..1623028 Burkholderia pseudomallei K96243 3094921 YP_111211.1 CDS BPSS1201 NC_006351.1 1623260 1623709 D Similar to Pseudomonas aeruginosa hypothetical protein Pa0269 SWALL:Q9I6M1 (EMBL:AE004465) (145 aa) fasta scores: E(): 6.7e-31, 54.86% id in 144 aa, and to Rhizobium meliloti hypothetical protein r00543 or smc02239 SWALL:Q92S80 (EMBL:AL591784) (153 aa) fasta scores: E(): 7e-31, 52.77% id in 144 aa, and to Agrobacterium tumefaciens hypothetical protein atu0492 or agr_c_871 SWALL:Q8UI08 (EMBL:AE009018) (167 aa) fasta scores: E(): 6.3e-29, 50.35% id in 141 aa; hypothetical protein 1623260..1623709 Burkholderia pseudomallei K96243 3094922 YP_111212.1 CDS BPSS1202 NC_006351.1 1623706 1624161 D Similar to Pseudomonas aeruginosa hypothetical protein Pa0270 pa0270 SWALL:Q9I6M0 (EMBL:AE004465) (135 aa) fasta scores: E(): 1.4e-11, 39.55% id in 134 aa, and to Rhizobium meliloti hypothetical exported protein smb20700 rb1407 or smb20700 SWALL:Q92TT8 (EMBL:AL603647) (137 aa) fasta scores: E(): 5.4e-11, 41.22% id in 131 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 1623706..1624161 Burkholderia pseudomallei K96243 3095144 YP_111213.1 CDS pyrB NC_006351.1 1624695 1625990 D catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate; aspartate carbamoyltransferase 1624695..1625990 Burkholderia pseudomallei K96243 3095952 YP_111214.1 CDS BPSS1204 NC_006351.1 1626389 1628635 D Similar to Pseudomonas aeruginosa hydroxamate-type ferrisiderophore receptor PiuA or Fiu or pa4514 SWALL:O68590 (EMBL:AF051690) (753 aa) fasta scores: E(): 1.1e-134, 49.12% id in 741 aa, and to Escherichia coli O157:H7 outer membrane receptor for iron transport z1026 or ecs0883 SWALL:Q8X7W7 (EMBL:AE005261) (760 aa) fasta scores: E(): 7.3e-73, 36.9% id in 775 aa, and to Escherichia coli probable tonB-dependent receptor YbiL precursor or b0805 SWALL:YBIL_ECOLI (SWALL:P75780) (760 aa) fasta scores: E(): 7.3e-73, 36.77% id in 775 aa; iron transport receptor protein 1626389..1628635 Burkholderia pseudomallei K96243 3095648 YP_111215.1 CDS BPSS1205 NC_006351.1 1628637 1629383 D Similar to Pseudomonas aeruginosa hypothetical protein Pa4516 pa4516 SWALL:Q9HVQ6 (EMBL:AE004865) (271 aa) fasta scores: E(): 2.8e-35, 47.59% id in 229 aa, and to Xanthomonas axonopodis hypothetical protein Xac2943 xac2943 SWALL:AAM37788 (EMBL:AE011936) (252 aa) fasta scores: E(): 5.1e-32, 45.25% id in 232 aa, and to Xanthomonas campestris hypothetical protein Xcc2774 xcc2774 SWALL:AAM42046 (EMBL:AE012390) (252 aa) fasta scores: E(): 7.3e-31, 42.92% id in 226 aa; hypothetical protein 1628637..1629383 Burkholderia pseudomallei K96243 3095649 YP_111216.1 CDS BPSS1206 NC_006351.1 1629380 1630063 D Similar to Pseudomonas aeruginosa iron-uptake factor PiuC SWALL:O68589 (EMBL:AF051690) (226 aa) fasta scores: E(): 1.8e-52, 58.4% id in 226 aa, and to Xanthomonas campestris hypothetical protein Xcc2773SWALL:AAM42045 (EMBL:AE012390) (228 aa) fasta scores: E(): 2.9e-54, 61.13% id in 229 aa, and to Bordetella bronchiseptica hypothetical 25.1 kDa protein SWALL:Q9S3N8 (EMBL:AJ132742) (226 aa) fasta scores: E(): 9.9e-54, 60.17% id in 226 aa; hydroxylase 1629380..1630063 Burkholderia pseudomallei K96243 3097227 YP_111217.1 CDS BPSS1209 NC_006351.1 1631212 1631577 R Similar to Escherichia coli transposase InsN for insertion sequence element Is911A InsN1 or b0255 SWALL:INN1_ECOLI (SWALL:P75679) (134 aa) fasta scores: E(): 0.45, 29.78% id in 94 aa, and to Bradyrhizobium japonicum Id47 id47 SWALL:Q9ANP5 (EMBL:AF322012) (119 aa) fasta scores: E(): 4.8e-23, 72.81% id in 103 aa, and to Bradyrhizobium japonicum Id62 SWALL:Q9ANN6 (EMBL:AF322012) (119 aa) fasta scores: E(): 2.5e-22, 71.84% id in 103 aa; transposase complement(1631212..1631577) Burkholderia pseudomallei K96243 3097244 YP_111218.1 CDS BPSS1210 NC_006351.1 1631760 1632023 R Similar to Ralstonia solanacearum hypothetical protein rsc3217 or rs02434 SWALL:Q8XUH1 (EMBL:AL646074) (90 aa) fasta scores: E(): 1.1e-19, 60.71% id in 84 aa, and to Ralstonia solanacearum hypothetical protein rsc0961 or rs06040 SWALL:Q8Y0T2 (EMBL:AL646061) (88 aa) fasta scores: E(): 3.2e-15, 53.01% id in 83 aa, and to Ralstonia solanacearum hypothetical protein rsp0515 or rs00394 SWALL:Q8XSG1 (EMBL:AL646079) (88 aa) fasta scores: E(): 7e-15, 52.94% id in 85 aa; hypothetical protein complement(1631760..1632023) Burkholderia pseudomallei K96243 3097242 YP_111219.1 CDS BPSS1211 NC_006351.1 1632033 1633571 R Similar to Pseudomonas aeruginosa hypothetical protein Pa0259 SWALL:Q9I6N0 (EMBL:AE004464) (480 aa) fasta scores: E(): 4.5e-15, 28.39% id in 472 aa; hypothetical protein complement(1632033..1633571) Burkholderia pseudomallei K96243 3097243 YP_111220.1 CDS BPSS1212 NC_006351.1 1633710 1635902 R Similar to Pseudomonas aeruginosa hypothetical protein Pa0260 SWALL:Q9I6M9 (EMBL:AE004464) (716 aa) fasta scores: E(): 1.7e-24, 31.97% id in 763 aa; hypothetical protein complement(1633710..1635902) Burkholderia pseudomallei K96243 3095625 YP_111221.1 CDS BPSS1213 NC_006351.1 1635964 1638741 R Similar to Ralstonia solanacearum VGR-related protein rsc3222 or rs02439 SWALL:Q8XUG6 (EMBL:AL646074) (547 aa) fasta scores: E(): 7.4e-54, 45.28% id in 382 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0262 SWALL:Q9I6M7 (EMBL:AE004464) (1019 aa) fasta scores: E(): 4.1e-43, 31.13% id in 893 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1511 SWALL:Q9I3K1 (EMBL:AE004579) (842 aa) fasta scores: E(): 7.3e-39, 30.09% id in 864 aa; hypothetical protein complement(1635964..1638741) Burkholderia pseudomallei K96243 3097259 YP_111222.1 CDS BPSS1214 NC_006351.1 1640244 1640939 D transcriptional regulator 1640244..1640939 Burkholderia pseudomallei K96243 3097260 YP_111223.1 CDS BPSS1215 NC_006351.1 1640912 1642192 D Similar to Klebsiella pneumoniae citrate-proton symporter CitH or Cit SWALL:CIT1_KLEPN (SWALL:P16482) (444 aa) fasta scores: E(): 2.2e-19, 25.71% id in 420 aa, and to Rickettsia conorii proline/betaine transporter Prop7 or rc1368 SWALL:Q92FV9 (EMBL:AE008682) (424 aa) fasta scores: E(): 1.1e-27, 26.19% id in 420 aa, and to Rickettsia prowazekii proline/betaine transporter rp881 SWALL:Q9ZC87 (EMBL:AJ235273) (423 aa) fasta scores: E(): 1.2e-27, 26.52% id in 411 aa; sugar transporter 1640912..1642192 Burkholderia pseudomallei K96243 3096117 YP_111224.1 CDS BPSS1216 NC_006351.1 1642227 1642826 D Similar to Bacillus subtilis thiamine-phosphate pyrophosphorylase ThiE or ThiC or Ipa-26D SWALL:THIE_BACSU (SWALL:P39594) (222 aa) fasta scores: E(): 8.4e-11, 27.32% id in 172 aa, and to Ralstonia solanacearum thiamine-phosphate pyrophosphorylase ThiE2 or rsp0984 or rs02315 SWALL:Q8XR75 (EMBL:AL646082) (198 aa) fasta scores: E(): 6.5e-31, 43.68% id in 190 aa, and to Xanthomonas axonopodis dGTP-pyrophosphohydrolase xac0789 SWALL:AAM35677 (EMBL:AE011709) (315 aa) fasta scores: E(): 1.3e-25, 43.78% id in 185 aa; thiamine-phosphate pyrophosphorylase 1642227..1642826 Burkholderia pseudomallei K96243 3097261 YP_111225.1 CDS BPSS1217 NC_006351.1 1644100 1644699 D Similar to Ralstonia solanacearum hypothetical protein rsp0327 or rs05439 SWALL:Q8XSZ0 (EMBL:AL646078) (199 aa) fasta scores: E(): 2.3e-33, 60.41% id in 192 aa, and to Caulobacter crescentus hypothetical protein Cc0019 SWALL:Q9AC47 (EMBL:AE005676) (210 aa) fasta scores: E(): 3.4e-14, 43.78% id in 201 aa, and to Rhizobium loti hypothetical protein Mlr0093 SWALL:Q98NL1 (EMBL:AP002994) (536 aa) fasta scores: E(): 3.5e-09, 36.84% id in 190 aa; hypothetical protein 1644100..1644699 Burkholderia pseudomallei K96243 3097262 YP_111226.1 CDS BPSS1218 NC_006351.1 1645592 1647145 D C-terminus similar to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or Chem or stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 1.9e-53, 56.88% id in 327 aa, and entire protein similar to Ralstonia solanacearum methyl-accepting chemotaxis transducer transmembrane protein rsp1099 or rs02605 SWALL:Q8XQW9 (EMBL:AL646082) (513 aa) fasta scores: E(): 3.3e-87, 52.62% id in 515 aa, and entire protein similar to Ralstonia solanacearum probable methyl-accepting chemotaxis transducer transmembrane protein rsc1155 or rs04596 SWALL:Q8Y089 (EMBL:AL646063) (629 aa) fasta scores: E(): 9.5e-83, 50.87% id in 515 aa; methyl-accepting chemotaxis protein 1645592..1647145 Burkholderia pseudomallei K96243 3097185 YP_111227.1 CDS BPSS1219 NC_006351.1 1647742 1649526 D Similar to Neisseria meningitidis penicillin-binding protein 2 PenA or nma2072 or nmb0413 SWALL:PBP2_NEIMA (SWALL:P11882) (581 aa) fasta scores: E(): 1.2e-81, 44.13% id in 580 aa, and to Ralstonia solanacearum probable penicillin-binding 3 precursor Pbp-3 transmembrane protein ftsi or rsc2850 or rs00255 SWALL:Q8XVI1 (EMBL:AL646072) (595 aa) fasta scores: E(): 1.9e-107, 51.9% id in 578 aa, and to Neisseria meningitidis penicillin-binding protein 2 PenA SWALL:Q51098 (EMBL:X59630) (582 aa) fasta scores: E(): 7.3e-82, 44.63% id in 578 aa; penicillin-binding protein 1647742..1649526 Burkholderia pseudomallei K96243 3097077 YP_111228.1 CDS araF NC_006351.1 1649914 1650915 D Similar to Escherichia coli L-arabinose-binding periplasmic protein precursor AraF or b1901 SWALL:ARAF_ECOLI (SWALL:P02924) (329 aa) fasta scores: E(): 2.9e-51, 46.08% id in 319 aa, and to Ralstonia solanacearum probable L-arabinose-binding periplasmic AraF or rsc2758 or rs00096 SWALL:Q8XVS1 (EMBL:AL646071) (331 aa) fasta scores: E(): 7.5e-77, 64.46% id in 318 aa, and to Rhizobium meliloti ABC transporter periplasmic sugar-binding protein rb0490 or smb20508 SWALL:Q92W55 (EMBL:AL603643) (327 aa) fasta scores: E(): 1.7e-66, 55.55% id in 324 aa; L-arabinose-binding periplasmic protein precursor 1649914..1650915 Burkholderia pseudomallei K96243 3095667 YP_111229.1 CDS BPSS1221 NC_006351.1 1650974 1651747 D Similar to Escherichia coli oxidoreductase UcpA or b2426 SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 9.6e-19, 35.03% id in 254 aa, and to Agrobacterium tumefaciens short-chain dehydrogenase atu2597 or agr_c_4705 SWALL:Q8UCA1 (EMBL:AE009206) (261 aa) fasta scores: E(): 7.8e-32, 46.03% id in 252 aa, and to Rhizobium meliloti oxidoreductase, Sdr superfamily protein rb0825 or smb21159 SWALL:Q92V84 (EMBL:AL603645) (258 aa) fasta scores: E(): 2.7e-29, 43.47% id in 253 aa; short chain dehydrogenase 1650974..1651747 Burkholderia pseudomallei K96243 3097078 YP_111230.1 CDS BPSS1222 NC_006351.1 1651782 1653533 R Similar to Yersinia enterocolitica efflux pump/antiporter RosB SWALL:Q56876 (EMBL:U46859) (563 aa) fasta scores: E(): 5.1e-42, 46.44% id in 562 aa, and to Rhizobium meliloti transport protein ra0872 or sma1600 SWALL:Q92YK4 (EMBL:AE007274) (584 aa) fasta scores: E(): 1.1e-95, 51.13% id in 573 aa, and to Brucella melitensis potassium/proton antiporter rosb bmei0679 SWALL:Q8YHW7 (EMBL:AE009509) (619 aa) fasta scores: E(): 1.1e-94, 50.52% id in 576 aa; efflux pump/antiporter complement(1651782..1653533) Burkholderia pseudomallei K96243 3097201 YP_111231.1 CDS BPSS1223 NC_006351.1 1654763 1655665 D Similar to Pseudomonas aeruginosa hypothetical protein Pa3325 SWALL:Q9HYS0 (EMBL:AE004754) (295 aa) fasta scores: E(): 2.8e-58, 49.14% id in 291 aa, and to Streptomyces coelicolor hypothetical protein sco2221 or sc10b7.16 SWALL:Q9KZ16 (EMBL:AL939111) (296 aa) fasta scores: E(): 6.4e-46, 46.66% id in 285 aa, and to Mycobacterium tuberculosis hypothetical protein rv2777c or mt2847 or mtv002.42C SWALL:O33319 (EMBL:AL008967) (393 aa) fasta scores: E(): 1.1e-41, 39.22% id in 283 aa; hypothetical protein 1654763..1655665 Burkholderia pseudomallei K96243 3095929 YP_111232.1 CDS BPSS1224 NC_006351.1 1655766 1657739 D Similar to Synechocystis sp. hypothetical protein Sll0173 SWALL:Q55557 (EMBL:D63999) (352 aa) fasta scores: E(): 2.4e-16, 31.06% id in 264 aa, and to Streptomyces coelicolor hydrolase sco4449 or scd6.27C SWALL:Q9KZX7 (EMBL:AL939120) (299 aa) fasta scores: E(): 3.8e-05, 26.2% id in 290 aa, and to Ralstonia solanacearum hydrolase transmembrane protein rsp0135 or rs02985 SWALL:Q8XTH5 (EMBL:AL646076) (349 aa) fasta scores: E(): 7.7e-05, 32.16% id in 286 aa; hypothetical protein 1655766..1657739 Burkholderia pseudomallei K96243 3095930 YP_111233.1 CDS BPSS1225 NC_006351.1 1657753 1658109 D hypothetical protein 1657753..1658109 Burkholderia pseudomallei K96243 3095988 YP_111234.1 CDS BPSS1226 NC_006351.1 1658338 1658616 D hypothetical protein 1658338..1658616 Burkholderia pseudomallei K96243 3097014 YP_111235.1 CDS BPSS1227 NC_006351.1 1658768 1659241 R Similar to Streptomyces coelicolor hypothetical protein sco7282 or sc5h1.10C SWALL:Q9X7R8 (EMBL:AL939131) (160 aa) fasta scores: E(): 4.2e-28, 50.31% id in 159 aa, and to Bradyrhizobium japonicum Blr2409 protein SWALL:BAC47674 (EMBL:AP005943) (162 aa) fasta scores: E(): 7e-25, 42.4% id in 158 aa, and to Rhizobium loti hypothetical protein Mll5357 SWALL:Q98C01 (EMBL:AP003006) (156 aa) fasta scores: E(): 3.2e-24, 44.23% id in 156 aa; hypothetical protein complement(1658768..1659241) Burkholderia pseudomallei K96243 3097015 YP_111236.1 CDS BPSS1228 NC_006351.1 1659397 1660419 R Similar to Pseudomonas fluorescens CmaX SWALL:Q9S4T9 (EMBL:AF115334) (331 aa) fasta scores: E(): 3.2e-19, 28.32% id in 293 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1873 SWALL:Q9I2M4 (EMBL:AE004613) (340 aa) fasta scores: E(): 2.9e-77, 62.91% id in 329 aa, and to Pseudomonas aeruginosa cytoplasmic membrane-associated protein CmaX or pa1773 SWALL:Q9ZIH2 (EMBL:AF027290) (332 aa) fasta scores: E(): 1.1e-22, 28.48% id in 337 aa; cation transporter complement(1659397..1660419) Burkholderia pseudomallei K96243 3096660 YP_111237.1 CDS BPSS1229 NC_006351.1 1660932 1661714 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 aga operon transcriptional repressor AgaR or b3131 or c3886 or z4483 or ecs4009 SWALL:AGAR_ECOLI (SWALL:P42902) (269 aa) fasta scores: E(): 1.1e-14, 28.62% id in 248 aa, and to Rhizobium loti transcriptional regulator mlr6641 SWALL:Q988Q4 (EMBL:AP003009) (238 aa) fasta scores: E(): 3.5e-46, 61.68% id in 214 aa, and to Rhizobium meliloti transcription regulator protein r03273 or smc03890 SWALL:Q92L17 (EMBL:AL591793) (260 aa) fasta scores: E(): 1.4e-31, 42.97% id in 249 aa; transcriptional regulator 1660932..1661714 Burkholderia pseudomallei K96243 3096395 YP_111238.1 CDS BPSS1230 NC_006351.1 1661727 1662884 D Similar to Yersinia pestis membrane protein ypo1221 or y2967 SWALL:Q8ZGR2 (EMBL:AJ414147) (384 aa) fasta scores: E(): 1.7e-54, 46.32% id in 367 aa, and to Rhizobium meliloti transport protein r03272 or smc03889 SWALL:Q92L18 (EMBL:AL591793) (379 aa) fasta scores: E(): 3.4e-36, 36.43% id in 365 aa, and to Agrobacterium tumefaciens MFS permease atu2724 or agr_c_4938 SWALL:Q8UBX5 (EMBL:AE009218) (398 aa) fasta scores: E(): 1.3e-34, 32.33% id in 368 aa; transport protein 1661727..1662884 Burkholderia pseudomallei K96243 3096396 YP_111239.1 CDS BPSS1231 NC_006351.1 1663300 1663770 R Similar to Yersinia pestis hypothetical protein Ypo4064 ypo4064 SWALL:Q8Z9X3 (EMBL:AJ414160) (150 aa) fasta scores: E(): 5.2e-26, 51.02% id in 147 aa; hypothetical protein complement(1663300..1663770) Burkholderia pseudomallei K96243 3095100 YP_111240.1 CDS BPSS1232 NC_006351.1 1664562 1665842 D Similar to Rhodobacter sphaeroides periplasmic sorbitol-binding protein smoE SWALL:O30831 (EMBL:AF018073) (436 aa) fasta scores: E(): 2.4e-22, 28.47% id in 432 aa, and to the C-terminus of Yersinia pestis hypothetical protein similar to af039956_5 sinorhizobium fredii ypo1893 or y2417 SWALL:Q9ZC22 (EMBL:AL031866) (422 aa) fasta scores: E(): 6.2e-37, 33.87% id in 434 aa, and to Rhizobium meliloti probable sorbitol-binding periplasmic protein smoE or r02445 or smc01496 SWALL:Q92N02 (EMBL:AL591790) (436 aa) fasta scores: E(): 2e-23, 29.13% id in 429 aa; transporter periplasmic binding protein 1664562..1665842 Burkholderia pseudomallei K96243 3096060 YP_111241.1 CDS BPSS1233 NC_006351.1 1666029 1666907 D Similar to Streptococcus pneumoniae binding protein dependent ORF-3 SWALL:Q54725 (EMBL:U43526) (294 aa) fasta scores: E(): 4.9e-26, 31.93% id in 285 aa, and to Rhizobium loti sugar ABC transporter permease mlr4912 SWALL:Q98D12 (EMBL:AP003005) (290 aa) fasta scores: E(): 1.9e-63, 60.77% id in 283 aa, and to Yersinia pestis similar to many ypo1894 or y2416 SWALL:Q9ZC23 (EMBL:AL031866) (286 aa) fasta scores: E(): 1.3e-31, 33.81% id in 278 aa; binding-protein-dependent transport system protein 1666029..1666907 Burkholderia pseudomallei K96243 3096061 YP_111242.1 CDS BPSS1234 NC_006351.1 1666895 1667707 D Similar to Rhizobium meliloti ThuG or rb0313 or smb20327 SWALL:Q9R9Q5 (EMBL:AF175299) (276 aa) fasta scores: E(): 9.7e-24, 35.33% id in 266 aa, and to Rhizobium loti sugar ABC transporter permease mlr4913 SWALL:Q98D11 (EMBL:AP003005) (276 aa) fasta scores: E(): 4.3e-58, 57.99% id in 269 aa, and to Pseudomonas fluorescens probable ABC transporter permease MtlG SWALL:O30493 (EMBL:AF007800) (276 aa) fasta scores: E(): 1.9e-26, 35.24% id in 261 aa; ABC transporter permease 1666895..1667707 Burkholderia pseudomallei K96243 3096150 YP_111243.1 CDS BPSS1235 NC_006351.1 1667729 1668763 D Similar to Candida sp. HA167 xylitol dehydrogenase Xdh SWALL:O74230 (EMBL:AF072541) (353 aa) fasta scores: E(): 2.5e-40, 40.95% id in 337 aa, and to Agrobacterium tumefaciens xylitol dehydrogenase atu4318 or agr_l_1091 SWALL:Q8U7Y1 (EMBL:AE009360) (350 aa) fasta scores: E(): 1.1e-78, 62.35% id in 348 aa, and to Rhizobium loti xylitol mlr4915 SWALL:Q98D10 (EMBL:AP003005) (348 aa) fasta scores: E(): 1.2e-76, 62.75% id in 341 aa; zinc-binding xylitol/sorbitol dehydrogenase 1667729..1668763 Burkholderia pseudomallei K96243 3096519 YP_111244.1 CDS BPSS1236 NC_006351.1 1668767 1669960 D Similar to Bacillus pseudofirmus maltose transportor ATP-binding protein malK SWALL:O87551 (EMBL:AF084104) (366 aa) fasta scores: E(): 1.3e-51, 50.14% id in 355 aa, and to Rhizobium loti sugar ABC transporter ATP-binding protein mlr4917 SWALL:Q98D09 (EMBL:AP003005) (363 aa) fasta scores: E(): 1.2e-60, 58.21% id in 347 aa, and to Brucella melitensis maltose/maltodextrin transport ATP-binding protein malK bmeI1713 SWALL:Q8YF14 (EMBL:AE009605) (363 aa) fasta scores: E(): 2.3e-55, 53.46% id in 361 aa; sugar transporter ATP-binding protein 1668767..1669960 Burkholderia pseudomallei K96243 3096520 YP_111245.1 CDS BPSS1237 NC_006351.1 1669957 1670955 D Similar to Pseudomonas fluorescens activator protein mtlR SWALL:O52770 (EMBL:AF047527) (301 aa) fasta scores: E(): 1.2e-38, 39.33% id in 300 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4319 or agr_l_1086 SWALL:Q8U7Y0 (EMBL:AE009360) (305 aa) fasta scores: E(): 3.9e-51, 46.29% id in 283 aa; AraC family transcriptional regulator 1669957..1670955 Burkholderia pseudomallei K96243 3097228 YP_111246.1 CDS BPSS1238 NC_006351.1 1670952 1672412 D Similar to Klebsiella pneumoniae D-xylulose-kinase DalK SWALL:O52719 (EMBL:AF045245) (487 aa) fasta scores: E(): 4.7e-98, 52.92% id in 478 aa, and to Ralstonia solanacearum D-arabinitol kinase DalK or rsc2128 or rs01476 SWALL:Q8XXI5 (EMBL:AL646068) (491 aa) fasta scores: E(): 9.3e-100, 55.8% id in 482 aa; sugar carbohydrate kinase 1670952..1672412 Burkholderia pseudomallei K96243 3097131 YP_111247.1 CDS BPSS1239 NC_006351.1 1673068 1674069 D Similar to Pseudomonas putida D-alanyl-D-alanine carboxypeptidase DacA or pp4803 SWALL:AAN70372 (EMBL:AE016792) (386 aa) fasta scores: E(): 3.1e-33, 42.75% id in 276 aa, and to Ralstonia solanacearum probable penicillin-binding Dac or rsc0327 or rs03294 SWALL:Q8Y2K8 (EMBL:AL646058) (397 aa) fasta scores: E(): 4.4e-45, 44.87% id in 312 aa, and to Xanthomonas axonopodis penicillin-binding protein 6 DacC or xac0664 SWALL:Q8PPM2 (EMBL:AE011695) (401 aa) fasta scores: E(): 1.2e-33, 38.8% id in 268 aa; peptidase 1673068..1674069 Burkholderia pseudomallei K96243 3097132 YP_111248.1 CDS ftsI NC_006351.1 1674424 1676136 D Similar to Neisseria gonorrhoeae penicillin-binding protein 2 PenA SWALL:PBP2_NEIGO (SWALL:P08149) (581 aa) fasta scores: E(): 1.9e-65, 37.97% id in 574 aa, and to Ralstonia solanacearum probable penicillin-binding 3 precursor pbp-3 transmembrane protein FtsI or rsc2850 or rs00255 SWALL:Q8XVI1 (EMBL:AL646072) (595 aa) fasta scores: E(): 1e-84, 46.4% id in 556 aa, and to Xanthomonas axonopodis penicillin-binding protein 3 FtsI or xac0774 SWALL:AAM35662 (EMBL:AE011708) (622 aa) fasta scores: E(): 2.7e-68, 40.76% id in 547 aa; penicillin-binding protein 1674424..1676136 Burkholderia pseudomallei K96243 3095351 YP_111249.1 CDS BPSS1241 NC_006351.1 1676705 1680961 R Possible fusion protein. N-terminal region is similar to Synechococcus sp. nitrate reductase NarB SWALL:NARB_SYNP7 (SWALL:P39458) (729 aa) fasta scores: E(): 9.4e-73, 43.09% id in 724 aa. C-terminal region is similar to Escherichia coli sulfite reductase [NADPH] flavoprotein alpha-component CysJ SWALL:CYSJ_ECOLI (SWALL:P38038) (598 aa) fasta scores: E(): 8.1e-70, 39.13% id in 598 aa; bifunctional reductase complement(1676705..1680961) Burkholderia pseudomallei K96243 3095935 YP_111250.1 CDS BPSS1242 NC_006351.1 1681005 1681355 R Similar to Escherichia coli, and Escherichia coli O157:H7 nitrite reductase [NAD(P)H] NirD or b3366 or z4727 or ecs4217 SWALL:NIRD_ECOLI (SWALL:P23675) (108 aa) fasta scores: E(): 5.4e-14, 46.29% id in 108 aa, and to Ralstonia solanacearum probable nitrite reductase NADPH NirD or rsp1221 or rs03165 SWALL:Q8XQK3 (EMBL:AL646083) (113 aa) fasta scores: E(): 2.3e-29, 70% id in 110 aa, and to Yersinia pestis nitrite reductase NirD or ypo0160 or y3944 SWALL:Q8ZJE9 (EMBL:AJ414141) (108 aa) fasta scores: E(): 9.3e-17, 48.64% id in 111 aa; nitrite reductase complement(1681005..1681355) Burkholderia pseudomallei K96243 3096245 YP_111251.1 CDS nirB NC_006351.1 1681393 1683978 R Similar to Escherichia coli nitrite reductase [NAD(P)H] NirB or b3365 SWALL:NIRB_ECOLI (SWALL:P08201) (847 aa) fasta scores: E(): 3.8e-212, 61.02% id in 839 aa, and to Ralstonia solanacearum probable nitrite reductase NADPH NirB or rsp1222 or rs03166 SWALL:Q8XQK2 (EMBL:AL646083) (852 aa) fasta scores: E(): 0, 78.9% id in 839 aa; nitrite reductase (NAD(P)H) complement(1681393..1683978) Burkholderia pseudomallei K96243 3097160 YP_111252.1 CDS BPSS1244 NC_006351.1 1683992 1685317 R Similar to Cylindrotheca fusiformis nitrate transporter Nat1 SWALL:Q9SWR7 (EMBL:AF135038) (482 aa) fasta scores: E(): 1.4e-51, 38.79% id in 415 aa, and to Ralstonia solanacearum probable high affinity nitrate transporter transmembrane protein rsp1223 or rs03167 SWALL:Q8XQK1 (EMBL:AL646083) (441 aa) fasta scores: E(): 2e-120, 71.33% id in 436 aa, and to Skeletonema costatum nitrate transporter SWALL:Q8RY50 (EMBL:AY078280) (487 aa) fasta scores: E(): 8.7e-53, 38.39% id in 435 aa; nitrate transporter complement(1683992..1685317) Burkholderia pseudomallei K96243 3096246 YP_111253.1 CDS BPSS1245 NC_006351.1 1686328 1687152 D Similar to Pseudomonas fluorescens uroporphyrin-III c-methyltransferase CobA SWALL:SUMT_PSEFL (SWALL:P37725) (247 aa) fasta scores: E(): 2.2e-32, 46.38% id in 235 aa, and to Xanthomonas campestris uroporphyrin-III c-methyltransferase CysG or xcc2010 SWALL:AAM41299 (EMBL:AE012305) (258 aa) fasta scores: E(): 1.5e-49, 63.55% id in 236 aa, and to Pseudomonas aeruginosa uroporphyrin-III c-methyltransferase CobA or pa1778 SWALL:Q9I2W4 (EMBL:AE004603) (245 aa) fasta scores: E(): 5e-37, 51.31% id in 228 aa; possible alternative start site at codon 41 and codon 44; uroporphyrin-III C-methyltransferase 1686328..1687152 Burkholderia pseudomallei K96243 3095745 YP_111254.1 CDS BPSS1246 NC_006351.1 1687254 1687850 D Similar to Azotobacter vinelandii NasT SWALL:Q44531 (EMBL:X83602) (192 aa) fasta scores: E(): 9.3e-28, 45.69% id in 186 aa, and to Xanthomonas campestris histidine kinase/response regulator hybrid protein NasT or xcc2004 SWALL:AAM41293 (EMBL:AE012305) (190 aa) fasta scores: E(): 2e-36, 60.87% id in 184 aa. Possible alternative translational start site; response regulator protein 1687254..1687850 Burkholderia pseudomallei K96243 3096027 YP_111255.1 CDS BPSS1247 NC_006351.1 1687847 1688929 D Similar to Klebsiella oxytoca nitrate transporter component NasF SWALL:Q48466 (EMBL:L27431) (418 aa) fasta scores: E(): 3.3e-57, 45.55% id in 349 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1786 SWALL:Q9I2V6 (EMBL:AE004604) (402 aa) fasta scores: E(): 6.3e-65, 53.17% id in 346 aa, and to Xanthomonas campestris nitrate transport ATP-binding protein NasF or xcc2005 SWALL:AAM41294 (EMBL:AE012305) (356 aa) fasta scores: E(): 2.4e-63, 51.03% id in 339 aa, and to Ralstonia solanacearum nitrate transporter protein NasF or rsc0381 or rs03349 SWALL:Q8Y2F5 (EMBL:AL646058) (420 aa) fasta scores: E(): 5.6e-63, 48.98% id in 345 aa; nitrate transporter component 1687847..1688929 Burkholderia pseudomallei K96243 3096028 YP_111256.1 CDS folE NC_006351.1 1689206 1689838 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(1689206..1689838) Burkholderia pseudomallei K96243 3097265 YP_111257.1 CDS BPSS1249 NC_006351.1 1691427 1693619 D lipoprotein 1691427..1693619 Burkholderia pseudomallei K96243 3095693 YP_111258.1 CDS BPSS1250 NC_006351.1 1694154 1695176 R Similar to Mycoplana ramosa acetylpolyamine aminohydrolase AphA or Aph SWALL:APHA_MYCRA (SWALL:Q48935) (341 aa) fasta scores: E(): 1e-41, 37.46% id in 339 aa, and to Rhizobium loti acetylpolyamine aminohydrolase mll0103 SWALL:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 9.4e-59, 45.85% id in 338 aa, and to Pseudomonas aeruginosa acetylpolyamine aminohydrolase AphA or pa1409 SWALL:Q9I3T5 (EMBL:AE004570) (346 aa) fasta scores: E(): 1.5e-50, 43.64% id in 346 aa; acetylpolyamine aminohydrolase complement(1694154..1695176) Burkholderia pseudomallei K96243 3095694 YP_111259.1 CDS BPSS1251 NC_006351.1 1695207 1696586 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(1695207..1696586) Burkholderia pseudomallei K96243 3095714 YP_111260.1 CDS BPSS1252 NC_006351.1 1696611 1697945 R Similar to Escherichia coli shikimate transporter ShiA or b1981 SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 5.4e-52, 36.34% id in 421 aa, and to Pseudomonas aeruginosa probable MFS transporter pa3595 SWALL:Q9HY31 (EMBL:AE004780) (469 aa) fasta scores: E(): 2.9e-66, 44.17% id in 446 aa, and to Rhodococcus sp 3- ohpA SWALL:Q9KH22 (EMBL:AF274045) (468 aa) fasta scores: E(): 8.3e-59, 40.54% id in 439 aa; inner membrane transport protein complement(1696611..1697945) Burkholderia pseudomallei K96243 3095027 YP_111261.1 CDS BPSS1253 NC_006351.1 1698134 1699072 D Similar to Thiobacillus denitrificans CbbR SWALL:Q9APD4 (EMBL:AF307090) (316 aa) fasta scores: E(): 5.5e-15, 27.97% id in 286 aa, and to the Acinetobacter lwoffii fragment of hypothetical 14.1 kDa protein SWALL:O86998 (EMBL:U77659) (124 aa) fasta scores: E(): 8.5e-36, 78.51% id in 121 aa, and to Rhizobium meliloti transcriptional regulator, LysR family protein rb0846 or smb21180 SWALL:Q92V68 (EMBL:AL603645) (317 aa) fasta scores: E(): 1.2e-35, 37.93% id in 290 aa; LysR family transcriptional regulator 1698134..1699072 Burkholderia pseudomallei K96243 3095028 YP_111262.1 CDS BPSS1255 NC_006351.1 1699715 1700722 R Similar to Bradyrhizobium japonicum fragment of GstR SWALL:O67999 (EMBL:AF007569) (342 aa) fasta scores: E(): 2e-25, 35.25% id in 295 aa, and to Rhizobium meliloti transcriptional regulator protein rb0476 or smb20494 SWALL:Q92W69 (EMBL:AL603643) (298 aa) fasta scores: E(): 6.1e-54, 53.92% id in 293 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2534 SWALL:Q9I0V0 (EMBL:AE004681) (303 aa) fasta scores: E(): 8.8e-53, 53% id in 300 aa. CDS is extended at the C-terminus in comparison to some orthologues; LysR family transcriptional regulator complement(1699715..1700722) Burkholderia pseudomallei K96243 3095633 YP_111263.1 CDS BPSS1256 NC_006351.1 1700846 1701589 D Similar to Picea abies short-chain type dehydrogenase/reductase SWALL:SDR1_PICAB (SWALL:Q08632) (271 aa) fasta scores: E(): 8.8e-29, 44.84% id in 252 aa, and to Rhizobium loti probable short chain dehydrogenase mll1981 SWALL:Q98JE4 (EMBL:AP002998) (258 aa) fasta scores: E(): 9.7e-50, 59.83% id in 239 aa, and to Rhizobium meliloti short chain dehydrogenase/reductase rb0475 or smb20493 SWALL:Q92W70 (EMBL:AL603643) (244 aa) fasta scores: E(): 1.4e-48, 58.57% id in 239 aa, and to Xanthomonas axonopodis short chain dehydrogenase xac0083 SWALL:AAM34975 (EMBL:AE011631) (245 aa) fasta scores: E(): 1.3e-47, 58.02% id in 243 aa; short-chain type dehydrogenase/reductase 1700846..1701589 Burkholderia pseudomallei K96243 3095634 YP_111264.1 CDS BPSS1257 NC_006351.1 1701899 1703317 R Similar to Ralstonia solanacearum hypothetical protein rsc3367 or rs02642 SWALL:Q8XU27 (EMBL:AL646075) (482 aa) fasta scores: E(): 1.7e-58, 41.97% id in 467 aa, and to Ralstonia solanacearum hypothetical protein rsp1421 or rs03121 SWALL:Q8XQ65 (EMBL:AL646084) (383 aa) fasta scores: E(): 3.2e-12, 29.95% id in 227 aa, and to Mycobacterium tuberculosis hypothetical 38.7 kDa protein Mcr or rv1143 or mt1176 or mtci65.10 SWALL:O06543 (EMBL:Z95584) (395 aa) fasta scores: E(): 5.8e-12, 33.64% id in 211 aa; CoA transferase complement(1701899..1703317) Burkholderia pseudomallei K96243 3095230 YP_111265.1 CDS BPSS1258 NC_006351.1 1704390 1705427 R Similar to Pseudomonas aeruginosa hypothetical protein Pa2197 SWALL:Q9I1S0 (EMBL:AE004646) (345 aa) fasta scores: E(): 4.7e-89, 67.44% id in 344 aa, and to Escherichia coli NADP-dependent oxidoreductase YncB or b1449 SWALL:YNCB_ECOLI (SWALL:P76113) (353 aa) fasta scores: E(): 9.5e-85, 64.53% id in 344 aa, and to Escherichia coli O157:H7 oxidoreductase YncB or z2270 or ecs2053 SWALL:Q8X9W9 (EMBL:AE005361) (376 aa) fasta scores: E(): 1e-84, 64.53% id in 344 aa; oxidoreductase/dehydrogenase complement(1704390..1705427) Burkholderia pseudomallei K96243 3095455 YP_111266.1 CDS BPSS1259 NC_006351.1 1705492 1706649 R Similar to Clostridium acetobutylicum NADH-dependent butanol dehydrogenase B BdhB or cac3298 SWALL:ADHB_CLOAB (SWALL:Q04945) (390 aa) fasta scores: E(): 1.1e-46, 39.72% id in 360 aa, and to Zymomonas mobilis NADH-dependent butanol dehydrogenase YugJ SWALL:Q9Z659 (EMBL:AF102543) (385 aa) fasta scores: E(): 2.8e-101, 67.79% id in 385 aa, and to Salmonella typhi probable alcohol dehydrogenase sty3337 SWALL:Q8Z3Q2 (EMBL:AL627277) (387 aa) fasta scores: E(): 3.2e-95, 63.99% id in 386 aa; iron-containing alcohol dehydrogenase complement(1705492..1706649) Burkholderia pseudomallei K96243 3095456 YP_111267.1 CDS BPSS1260 NC_006351.1 1708563 1710377 D Limited similarity to Escherichia coli O157:H7 plasmid pO157 DNA, complete sequence l7031 SWALL:O82882 (EMBL:AB011549) (898 aa) fasta scores: E(): 4.8e-13, 24.09% id in 332 aa; hypothetical protein 1708563..1710377 Burkholderia pseudomallei K96243 3095492 YP_111268.1 CDS BPSS1261 NC_006351.1 1710619 1710951 R Similar to Ralstonia solanacearum hypothetical protein rsp0610 ror rs03757 SWALL:Q8XS71 (EMBL:AL646079) (110 aa) fasta scores: E(): 1.3e-33, 85.32% id in 109 aa, and to Neisseria meningitidis hypothetical protein Nma0986 SWALL:Q9JV57 (EMBL:AL162754) (106 aa) fasta scores: E(): 1.3e-11, 47.05% id in 102 aa, and to Neisseria meningitidis hypothetical protein Nmb0775 SWALL:Q9K047 (EMBL:AE002431) (106 aa) fasta scores: E(): 2.2e-10, 46.8% id in 94 aa; hypothetical protein complement(1710619..1710951) Burkholderia pseudomallei K96243 3097112 YP_111269.1 CDS BPSS1262 NC_006351.1 1711200 1711982 D Similar to Ralstonia solanacearum hypothetical protein rsp1480 or rs03063 SWALL:Q8XQ06 (EMBL:AL646085) (246 aa) fasta scores: E(): 8.9e-39, 60.61% id in 259 aa, and to Xanthomonas axonopodis hypothetical protein Xac3752 SWALL:AAM38595 (EMBL:AE012024) (236 aa) fasta scores: E(): 7.8e-22, 46.61% id in 251 aa, and to Xanthomonas campestris hypothetical protein Xcc3710 SWALL:AAM42968 (EMBL:AE012492) (248 aa) fasta scores: E(): 1.2e-20, 45.07% id in 264 aa; hypothetical protein 1711200..1711982 Burkholderia pseudomallei K96243 3097113 YP_111270.1 CDS BPSS1263 NC_006351.1 1711993 1714809 D Similar to Ralstonia solanacearum probable transmembrane protein rsp1481 or rs03062 SWALL:Q8XQ05 (EMBL:AL646085) (698 aa) fasta scores: E(): 1.6e-108, 53.09% id in 938 aa, and to Xanthomonas campestris hypothetical protein Xcc3711 xcc3711 SWALL:AAM42969 (EMBL:AE012492) (896 aa) fasta scores: E(): 2.9e-71, 48.25% id in 943 aa, and to Xanthomonas axonopodis hypothetical protein Xac3753 SWALL:AAM38596 (EMBL:AE012024) (452 aa) fasta scores: E(): 1.2e-68, 56.05% id in 421 aa; hypothetical protein 1711993..1714809 Burkholderia pseudomallei K96243 3094936 YP_111271.1 CDS BPSS1264 NC_006351.1 1714806 1715453 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rs03061 SWALL:Q8XQ04 (EMBL:AL646085) (215 aa) fasta scores: E(): 1.8e-65, 81.86% id in 215 aa. C-terminus is similar to the C-terminal region of Bacillus subtilis chemotaxis MotB protein SWALL:MOTB_BACSU (SWALL:P28612) (261 aa) fasta scores: E(): 5.9e-05, 30% id in 130 aa; hypothetical protein 1714806..1715453 Burkholderia pseudomallei K96243 3094888 YP_111272.1 CDS BPSS1265 NC_006351.1 1715446 1716288 D Similar to Ralstonia solanacearum hypothetical protein rsp1483 or rs03060 SWALL:Q8XQ03 (EMBL:AL646085) (219 aa) fasta scores: E(): 5.4e-14, 47.14% id in 280 aa, and to Xanthomonas campestris hypothetical protein Xcc3713 xcc3713 SWALL:Q8P4J4 (EMBL:AE012492) (237 aa) fasta scores: E(): 3.2e-07, 38.54% id in 262 aa, and to Xanthomonas axonopodis hypothetical protein Xac3755 SWALL:Q8PG62 (EMBL:AE012024) (440 aa) fasta scores: E(): 2e-06, 35.86% id in 276 aa. The coding sequence is contains a long repeat sequence (gcgcct x12) near the N-terminus; hypothetical protein 1715446..1716288 Burkholderia pseudomallei K96243 3094889 YP_111273.1 CDS BPSS1266 NC_006351.1 1716573 1719788 R Similar to Bacillus subtilis siderophore synthase DhbF SWALL:Q9R9I2 (EMBL:AF184977) (2378 aa) fasta scores: E(): 1.1e-119, 41.63% id in 1052 aa, and to Streptomyces chrysomallus actinomycin synthetase II AcmB SWALL:O68487 (EMBL:AF047717) (2611 aa) fasta scores: E(): 3.6e-165, 49.07% id in 1076 aa, and to Pseudomonas syringae syringopeptin synthetase SypA SWALL:Q9FDB3 (EMBL:AF286216) (1261 aa) fasta scores: E(): 5.2e-123, 39.61% id in 1083 aa; peptide/siderophore synthetase complement(1716573..1719788) Burkholderia pseudomallei K96243 3095669 YP_111274.1 CDS BPSS1267 NC_006351.1 1719868 1720074 R Similar to Streptomyces avermitilis MbtH-like protein SWALL:Q93GZ2 (EMBL:AB070956) (72 aa) fasta scores: E(): 3.6e-14, 53.84% id in 65 aa, and to Amycolatopsis mediterranei hypothetical 7.8 kDa protein SWALL:Q939Y8 (EMBL:Y16952) (69 aa) fasta scores: E(): 7.7e-15, 61.9% id in 63 aa; balhimycin biosynthetic protein MbtH complement(1719868..1720074) Burkholderia pseudomallei K96243 3095936 YP_111275.1 CDS BPSS1268 NC_006351.1 1720093 1721382 R Similar to Escherichia coli tetracycline resistance protein, class A TetA SWALL:TCR1_ECOLI (SWALL:P02982) (399 aa) fasta scores: E(): 4.6e-38, 35.75% id in 400 aa, and to Xanthomonas axonopodis tetracycline-efflux transporter TetA or xac4295 SWALL:AAM39125 (EMBL:AE012083) (421 aa) fasta scores: E(): 3.8e-46, 40.75% id in 400 aa, and to Xanthomonas campestris tetracycline-efflux transporter TetA or xcc4156 SWALL:AAM43372 (EMBL:AE012541) (420 aa) fasta scores: E(): 5.9e-43, 36.85% id in 407 aa; efflux system protein complement(1720093..1721382) Burkholderia pseudomallei K96243 3095937 YP_111276.1 CDS BPSS1269 NC_006351.1 1721387 1734097 R Similar to C-terminus of Aphanizomenon ovalisporum peptide synthetase AoaB SWALL:AAM33468 (EMBL:AF395828) (1869 aa) fasta scores: E(): 5.4e-125, 35.68% id in 1841 aa, and to C-terminus of Stigmatella aurantiaca MtaD SWALL:Q9RFK8 (EMBL:AF188287) (3291 aa) fasta scores: E(): 7.3e-124, 29.54% id in 3368 aa; peptide synthase/polyketide synthase complement(1721387..1734097) Burkholderia pseudomallei K96243 3097055 YP_111277.1 CDS BPSS1270 NC_006351.1 1734147 1734950 R Limited similarity to Caulobacter crescentus hypothetical protein Cc3057 SWALL:Q9A3Z3 (EMBL:AE005969) (261 aa) fasta scores: E(): 0.00043, 28.19% id in 227 aa; hypothetical protein complement(1734147..1734950) Burkholderia pseudomallei K96243 3095888 YP_111278.1 CDS BPSS1271 NC_006351.1 1735403 1735723 R Similar to Streptomyces avermitilis hypothetical protein SWALL:Q93HB6 (EMBL:AB070946) (88 aa) fasta scores: E(): 4.5e-11, 53.33% id in 75 aa, and to Anabaena sp. hypothetical protein Alr4059 alr4059 SWALL:Q8YPY1 (EMBL:AP003595) (126 aa) fasta scores: E(): 1.2e-05, 34.61% id in 78 aa; phosphopantetheine binding protein complement(1735403..1735723) Burkholderia pseudomallei K96243 3095889 YP_111279.1 CDS BPSS1272 NC_006351.1 1735704 1737497 R Similar to Streptomyces avermitilis acyl-CoA dehydrogenase SWALL:Q93HB7 (EMBL:AB070946) (609 aa) fasta scores: E(): 1.3e-71, 47.28% id in 590 aa, and to Anabaena sp. hypothetical protein Alr4058 alr4058 SWALL:Q8YPY2 (EMBL:AP003595) (602 aa) fasta scores: E(): 1.7e-37, 31.36% id in 577 aa, and to Rhizobium meliloti isovaleryl-CoA dehydrogenase IvdH or rb0700 or smb21121 SWALL:Q92VK1 (EMBL:AL603644) (387 aa) fasta scores: E(): 3.1e-13, 28% id in 375 aa; acyl-CoA dehydrogenase complement(1735704..1737497) Burkholderia pseudomallei K96243 3095324 YP_111280.1 CDS BPSS1273 NC_006351.1 1737494 1739254 R Similar to Streptomyces avermitilis acyl-CoA dehydrogenase SWALL:Q93HB7 (EMBL:AB070946) (609 aa) fasta scores: E(): 1.2e-53, 36.45% id in 587 aa, and to Anabaena sp. hypothetical protein Alr4058 alr4058 SWALL:Q8YPY2 (EMBL:AP003595) (602 aa) fasta scores: E(): 1.1e-65, 38.39% id in 586 aa; acyl-CoA dehydrogenase complement(1737494..1739254) Burkholderia pseudomallei K96243 3095542 YP_111281.1 CDS BPSS1274 NC_006351.1 1739251 1741083 R Similar to N-terminus of Myxococcus xanthus saframycin Mx1 synthetase B SafB SWALL:Q50857 (EMBL:U24657) (1770 aa) fasta scores: E(): 1.5e-78, 43.85% id in 586 aa, and to entire protein Anabaena sp. hypothetical protein Alr4057 alr4057 SWALL:Q8YPY3 (EMBL:AP003595) (602 aa) fasta scores: E(): 1.5e-75, 41.27% id in 596 aa, and to N-terminus of Streptomyces coelicolor polyketide synthase sco5892 or sc3f7.12 SWALL:O54155 (EMBL:AL939125) (2297 aa) fasta scores: E(): 2.2e-75, 43.69% id in 579 aa; polyketide synthase complement(1739251..1741083) Burkholderia pseudomallei K96243 3095543 YP_111282.1 CDS BPSS1275 NC_006351.1 1741680 1742204 D Similar to Pseudomonas syringae RNA polymerase sigma factor HrpL SWALL:HRPL_PSESY (SWALL:P37929) (184 aa) fasta scores: E(): 7e-10, 31.09% id in 164 aa, and to Ralstonia solanacearum probable RNA polymerase sigma factor transcription regulator protein rsp1651 or rs02210 SWALL:Q8XPI9 (EMBL:AL646086) (208 aa) fasta scores: E(): 4.6e-14, 38.23% id in 170 aa, and to Rhizobium meliloti rpoE6 RNA polymerase sigma factor rpoE6 or ra0075 or sma0143 SWALL:Q930W9 (EMBL:AE007202) (201 aa) fasta scores: E(): 8.2e-14, 37.03% id in 162 aa; RNA polymerase sigma factor 1741680..1742204 Burkholderia pseudomallei K96243 3096843 YP_111283.1 CDS BPSS1276 NC_006351.1 1742983 1743573 D Similar to Ralstonia solanacearum hypothetical protein rsc3277 or rs02506 SWALL:Q8XUB4 (EMBL:AL646074) (195 aa) fasta scores: E(): 5.3e-51, 73.95% id in 192 aa, and to Streptomyces coelicolor hypothetical protein sco1302 or scbac36f5.13C SWALL:Q93IW8 (EMBL:AL939108) (208 aa) fasta scores: E(): 4.2e-21, 40.41% id in 193 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0168 SWALL:Q9I6W4 (EMBL:AE004454) (196 aa) fasta scores: E(): 3.3e-18, 39.47% id in 190 aa; hypothetical protein 1742983..1743573 Burkholderia pseudomallei K96243 3095680 YP_111284.1 CDS cnrT NC_006351.1 1743703 1744773 D Similar to Ralstonia metallidurans CnrT protein SWALL:Q9L3G0 (EMBL:AJ276513) (351 aa) fasta scores: E(): 3.5e-84, 65.16% id in 356 aa, and to Ralstonia solanacearum probable cobalt-nickel-resistance system transmembrane protein CnrT or rsp1044 or rs02381 SWALL:Q8XR24 (EMBL:AL646082) (352 aa) fasta scores: E(): 1.1e-86, 68.07% id in 354 aa; cobalt-nickel-resistance system transmembrane protein 1743703..1744773 Burkholderia pseudomallei K96243 3096702 YP_111285.1 CDS BPSS1278 NC_006351.1 1745502 1746800 R Similar to Deinococcus radiodurans hypothetical protein Dr1724 SWALL:Q9RTN3 (EMBL:AE002014) (441 aa) fasta scores: E(): 2.5e-08, 27% id in 437 aa, and to Deinococcus radiodurans orf509E (fragment) SWALL:O83031 (EMBL:AB016803) (324 aa) fasta scores: E(): 1.2e-07, 28.34% id in 321 aa; oxidoreductase complement(1745502..1746800) Burkholderia pseudomallei K96243 3096218 YP_111286.1 CDS BPSS1278a NC_006351.1 1746879 1747595 D Weakly similar to Rhizobium loti MLL5233 protein SWALL:Q98CA4 (EMBL:AP003006) (219 aa) fasta scores: E(): 4.6e-05, 25.72% id in 206 aa. N-terminus similar to the N-terminal region of Anabaena sp. transcriptional regulator SWALL:Q8YQT9 (EMBL:AP003594) (192 aa) fasta scores: E(): 9.8e-10, 34% id in 150 aa; TetR family regulatory protein 1746879..1747595 Burkholderia pseudomallei K96243 3096017 YP_111287.1 CDS BPSS1279 NC_006351.1 1747574 1749181 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(1747574..1749181) Burkholderia pseudomallei K96243 3095570 YP_111288.1 CDS BPSS1280 NC_006351.1 1749591 1749848 D hypothetical protein 1749591..1749848 Burkholderia pseudomallei K96243 3095571 YP_111289.1 CDS BPSS1281 NC_006351.1 1749935 1750861 R Similar to Pseudomonas aeruginosa hypothetical protein pa2428 SWALL:Q9I154 (EMBL:AE004670) (304 aa) fasta scores: E(): 2.3e-90, 74.57% id in 295 aa, and to Rhizobium meliloti hypothetical protein ra0092 or sma0172 SWALL:Q930V2 (EMBL:AE007203) (306 aa) fasta scores: E(): 7.9e-73, 62.75% id in 298 aa; hypothetical protein complement(1749935..1750861) Burkholderia pseudomallei K96243 3095246 YP_111290.1 CDS BPSS1282 NC_006351.1 1751486 1752982 R lipoprotein complement(1751486..1752982) Burkholderia pseudomallei K96243 3095247 YP_111291.1 CDS BPSS1283 NC_006351.1 1752996 1754291 R Similar to Klebsiella pneumoniae MceH SWALL:Q93GK4 (EMBL:AF063590) (413 aa) fasta scores: E(): 1.6e-14, 24.01% id in 404 aa, and to Xylella fastidiosa colicin V secretion protein xf1216 SWALL:Q9PE12 (EMBL:AE003955) (420 aa) fasta scores: E(): 7.5e-24, 28.96% id in 397 aa, and to Pseudomonas aeruginosa probable secretion protein pa4142 SWALL:Q9HWN9 (EMBL:AE004831) (418 aa) fasta scores: E(): 1.9e-20, 26.23% id in 404 aa. Possible alternative translational start site; hypothetical protein complement(1752996..1754291) Burkholderia pseudomallei K96243 3095420 YP_111292.1 CDS BPSS1284 NC_006351.1 1754304 1755326 R hypothetical protein complement(1754304..1755326) Burkholderia pseudomallei K96243 3095621 YP_111293.1 CDS BPSS1285 NC_006351.1 1755323 1757467 R Similar to Klebsiella pneumoniae microcin MceG SWALL:Q93GK5 (EMBL:AF063590) (698 aa) fasta scores: E(): 2.3e-56, 29.89% id in 679 aa, and to Pseudomonas aeruginosa probable toxin transporter pa4143 SWALL:Q9HWN8 (EMBL:AE004831) (719 aa) fasta scores: E(): 1.8e-70, 33.9% id in 696 aa, and to Xylella fastidiosa colicin V secretion ABC transporter ATP-binding protein xf1220 SWALL:Q9PE08 (EMBL:AE003955) (707 aa) fasta scores: E(): 2.2e-67, 34% id in 700 aa; peptidase complement(1755323..1757467) Burkholderia pseudomallei K96243 3095622 YP_111294.1 CDS BPSS1286 NC_006351.1 1757583 1757801 R hypothetical protein complement(1757583..1757801) Burkholderia pseudomallei K96243 3095038 YP_111295.1 CDS BPSS1286a NC_006351.1 1758015 1758188 R hypothetical protein complement(1758015..1758188) Burkholderia pseudomallei K96243 3095982 YP_111296.1 CDS BPSS1287 NC_006351.1 1758557 1759897 D Similar to Enterobacter aerogenes TolC protein precursor SWALL:Q8VLQ0 (EMBL:AJ421426) (486 aa) fasta scores: E(): 1e-19, 26.16% id in 451 aa, and to Ralstonia solanacearum probable porin rsc0695 or rs01600 SWALL:Q8Y1J5 (EMBL:AL646060) (484 aa) fasta scores: E(): 4.3e-25, 27.8% id in 446 aa; outer membrane efflux protein 1758557..1759897 Burkholderia pseudomallei K96243 3095983 YP_111297.1 CDS BPSS1288 NC_006351.1 1760116 1761837 R Similar to Helicobacter pylori gamma-glutamyltranspeptidase hp1118 SWALL:O25743 (EMBL:AE000618) (567 aa) fasta scores: E(): 1.3e-83, 42.43% id in 568 aa, and to Caulobacter crescentus gamma-glutamyltransferase cc0104 SWALL:Q9ABW6 (EMBL:AE005685) (583 aa) fasta scores: E(): 3.3e-132, 63.54% id in 565 aa, and to Pseudomonas aeruginosa gamma-glutamyltranspeptidase precursor Ggt or pa1338 SWALL:Q9I406 (EMBL:AE004563) (557 aa) fasta scores: E(): 3.2e-130, 63.04% id in 552 aa; gamma-glutamyltransferase 1 complement(1760116..1761837) Burkholderia pseudomallei K96243 3095085 YP_111298.1 CDS BPSS1289 NC_006351.1 1762739 1763257 D hypothetical protein 1762739..1763257 Burkholderia pseudomallei K96243 3095284 YP_111299.1 CDS BPSS1290 NC_006351.1 1763600 1764118 D hypothetical protein 1763600..1764118 Burkholderia pseudomallei K96243 3095285 YP_111300.1 CDS BPSS1291 NC_006351.1 1764795 1769594 D Similar to Pseudomonas aeruginosa probable ATP-dependent DNA helicase pa3272 SWALL:Q9HYW9 (EMBL:AE004749) (1448 aa) fasta scores: E(): 4.7e-132, 63.01% id in 1598 aa, and to Xanthomonas axonopodis ATP-dependent DNA helicase Lhr1 or xac2450 SWALL:AAM37301 (EMBL:AE011882) (1480 aa) fasta scores: E(): 1.3e-123, 57.92% id in 1597 aa; DEAD/DEAH box helicase 1764795..1769594 Burkholderia pseudomallei K96243 3095462 YP_111301.1 CDS BPSS1292 NC_006351.1 1770212 1771507 D Similar to Bacillus subtilis amino acid permease YecA protein SWALL:O34560 (EMBL:Z99107) (463 aa) fasta scores: E(): 7e-40, 35.74% id in 414 aa, and to Escherichia coli O157:H7 transport YjeH or z5746 or ecs5122 SWALL:Q8XDR1 (EMBL:AE005648) (418 aa) fasta scores: E(): 3e-29, 34.21% id in 418 aa, and to Escherichia coli hypothetical protein YjeH or b4141 SWALL:YJEH_ECOLI (SWALL:P39277) (418 aa) fasta scores: E(): 3e-29, 34.21% id in 418 aa; amino acid permease 1770212..1771507 Burkholderia pseudomallei K96243 3095434 YP_111302.1 CDS BPSS1293 NC_006351.1 1771895 1772497 D Similar to Xanthomonas campestris hypothetical protein Xcc2424 SWALL:Q8P824 (EMBL:AE012353) (150 aa) fasta scores: E(): 2.8e-13, 55.17% id in 87 aa, and to Xanthomonas axonopodis hypothetical protein Xac2556 SWALL:Q8PJH5 (EMBL:AE011896) (124 aa) fasta scores: E(): 7.1e-12, 50.6% id in 83 aa; lipoprotein 1771895..1772497 Burkholderia pseudomallei K96243 3095435 YP_111303.1 CDS BPSS1294 NC_006351.1 1772610 1773047 R Similar to Pseudomonas aeruginosa hypothetical protein Pa1354 SWALL:Q9I3Z0 (EMBL:AE004565) (141 aa) fasta scores: E(): 1e-36, 67.85% id in 140 aa, and to Agrobacterium tumefaciens hypothetical protein atu0851 or agr_c_1556 SWALL:Q8UH34 (EMBL:AE009052) (140 aa) fasta scores: E(): 8.5e-34, 62.85% id in 140 aa; hypothetical protein complement(1772610..1773047) Burkholderia pseudomallei K96243 3095525 YP_111304.1 CDS aroG NC_006351.1 1773286 1774404 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1773286..1774404 Burkholderia pseudomallei K96243 3096312 YP_111305.1 CDS BPSS1296 NC_006351.1 1774902 1775570 R Similar to Acinetobacter sp. ADP1 O-methyltransferase-like protein SWALL:Q93D14 (EMBL:AF400582) (222 aa) fasta scores: E(): 7.2e-33, 47.27% id in 220 aa, and to Streptomyces coelicolor O-methyltransferase sco2338 or scc53.29 SWALL:Q9KXI2 (EMBL:AL939112) (223 aa) fasta scores: E(): 1.8e-41, 56.5% id in 223 aa, and to Rhizobium loti O-methyltransferase Mlr0279 SWALL:Q98N64 (EMBL:AP002994) (221 aa) fasta scores: E(): 1.2e-39, 53.18% id in 220 aa; O-methyltransferase-like protein complement(1774902..1775570) Burkholderia pseudomallei K96243 3094957 YP_111306.1 CDS BPSS1297 NC_006351.1 1776176 1777645 R Similar to Ralstonia solanacearum probable transmembrane protein rsp1524 or rs04801 SWALL:Q8XPW2 (EMBL:AL646085) (505 aa) fasta scores: E(): 2.2e-65, 39.58% id in 480 aa, and to Ralstonia solanacearum transmembrane protein rsp0398 or rs00826 SWALL:Q8XSR9 (EMBL:AL646078) (488 aa) fasta scores: E(): 2.9e-62, 39.62% id in 477 aa; regulatory protein complement(1776176..1777645) Burkholderia pseudomallei K96243 3094958 YP_111307.1 CDS BPSS1298 NC_006351.1 1778359 1779030 D hypothetical protein 1778359..1779030 Burkholderia pseudomallei K96243 3095336 YP_111308.1 CDS BPSS1299 NC_006351.1 1779761 1780765 R Similar to Agrobacterium tumefaciens pca operon transcriptional activator PcaQ or atu4543 or agr_l_649 SWALL:PCAQ_AGRT5 (SWALL:P52668) (311 aa) fasta scores: E(): 1.7e-38, 41.74% id in 309 aa, and to Rhizobium meliloti transcriptional activator of the Pca operon, LysR family protein pcaq or rb1492 or smb20580 SWALL:Q92TL9 (EMBL:AL603647) (313 aa) fasta scores: E(): 2.9e-40, 43.18% id in 308 aa, and to Ralstonia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein PcaQ or rsc1440 or rs03867 SWALL:Q8XZG1 (EMBL:AL646064) (319 aa) fasta scores: E(): 3.9e-40, 45.27% id in 307 aa; LysR family transcriptional regulator complement(1779761..1780765) Burkholderia pseudomallei K96243 3094910 YP_111309.1 CDS pcaH NC_006351.1 1780873 1781577 D Similar to Burkholderia cepacia protocatechuate 3,4-dioxygenase beta chain PcaH SWALL:PCXB_BURCE (SWALL:P15110) (235 aa) fasta scores: E(): 9.7e-88, 91.06% id in 235 aa, and to Pseudomonas marginata protocatechuate 3,4-dioxygenase beta-subunit PcaH SWALL:Q9ZB85 (EMBL:U33634) (234 aa) fasta scores: E(): 5.5e-87, 88.46% id in 234 aa, and to Acinetobacter lwoffii protocatechuate 3,4-dioxygenase beta subunit PcaH SWALL:Q8KQ86 (EMBL:AY099487) (226 aa) fasta scores: E(): 1.1e-79, 84.51% id in 226 aa; protocatechuate 3,4-dioxygenase 1780873..1781577 Burkholderia pseudomallei K96243 3095333 YP_111310.1 CDS pcaG NC_006351.1 1781580 1782173 D Similar to Burkholderia cepacia protocatechuate 3,4-dioxygenase alpha chain PcaG SWALL:PCXA_BURCE (SWALL:P15109) (197 aa) fasta scores: E(): 4.3e-56, 74.11% id in 197 aa, and to Pseudomonas marginata protocatechuate 3,4-dioxygenase alpha-subunit PcaG SWALL:Q9ZB84 (EMBL:U33634) (196 aa) fasta scores: E(): 1.9e-57, 74.61% id in 197 aa; protocatechuate 3,4-dioxygenase alpha chain 1781580..1782173 Burkholderia pseudomallei K96243 3095358 YP_111311.1 CDS BPSS1302 NC_006351.1 1782617 1783444 R Similar to Ralstonia solanacearum hypothetical protein rsc1384 or rs04667 SWALL:Q8XZL1 (EMBL:AL646064) (271 aa) fasta scores: E(): 3.7e-59, 65.45% id in 275 aa, and to Deinococcus radiodurans peptide ABC transporter dr1843 SWALL:Q9RTC2 (EMBL:AE002024) (283 aa) fasta scores: E(): 2.2e-24, 40.28% id in 283 aa, and to Streptomyces coelicolor transport associated protein sco6486 or sc9c7.22 SWALL:Q9ZBI8 (EMBL:AL939128) (277 aa) fasta scores: E(): 2.8e-19, 32.47% id in 271 aa; peptidase complement(1782617..1783444) Burkholderia pseudomallei K96243 3094911 YP_111312.1 CDS BPSS1303 NC_006351.1 1783444 1784790 R Similar to Ralstonia solanacearum probable D-aminopeptidase rsc1383 or rs04666 SWALL:Q8XZL2 (EMBL:AL646064) (341 aa) fasta scores: E(): 5.3e-39, 57.62% id in 413 aa, and to Brucella melitensis D-aminopeptidase bmeII0741 SWALL:Q8YBZ5 (EMBL:AE009708) (340 aa) fasta scores: E(): 5.9e-27, 41.14% id in 418 aa, and to Rhizobium loti probable D-aminopeptidase mlr2477 SWALL:Q98IB6 (EMBL:AP002999) (343 aa) fasta scores: E(): 8.3e-27, 41.53% id in 431 aa. CDS contains addition internal residue in comparison to orthologues. CDS is extended at the N-terminus in comparison to orthologues; aminopeptidase complement(1783444..1784790) Burkholderia pseudomallei K96243 3096850 YP_111313.1 CDS BPSS1304 NC_006351.1 1784790 1785698 R Similar to Bacillus firmus dipeptide transport system permease DppC SWALL:DPPC_BACFI (SWALL:P94312) (304 aa) fasta scores: E(): 4.2e-46, 43.28% id in 298 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1382 or rs04665 SWALL:Q8XZL3 (EMBL:AL646064) (299 aa) fasta scores: E(): 1.5e-93, 82.49% id in 297 aa, and to Escherichia coli O157:H7 transport system permease z1056 or ecs0911 SWALL:Q8X6V6 (EMBL:AE005264) (303 aa) fasta scores: E(): 2e-84, 77.03% id in 283 aa; ABC transport system permease complement(1784790..1785698) Burkholderia pseudomallei K96243 3097025 YP_111314.1 CDS BPSS1305 NC_006351.1 1785706 1786626 R Similar to Agrobacterium tumefaciens MoaB SWALL:O50268 (EMBL:AF242881) (313 aa) fasta scores: E(): 1e-42, 37.89% id in 314 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1381 or rs04750 SWALL:Q8XZL4 (EMBL:AL646064) (307 aa) fasta scores: E(): 2.5e-96, 80.32% id in 305 aa, and to Salmonella typhi hypothetical ABC transporter permease ylic or sty0889 SWALL:Q8Z862 (EMBL:AL627268) (306 aa) fasta scores: E(): 3.9e-91, 76.14% id in 306 aa; ABC transport permease complement(1785706..1786626) Burkholderia pseudomallei K96243 3097026 YP_111315.1 CDS BPSS1306 NC_006351.1 1786763 1788325 R Similar to Agrobacterium tumefaciens mannopinic acid permease AgaA SWALL:O50260 (EMBL:AF242881) (509 aa) fasta scores: E(): 7.9e-42, 30.29% id in 505 aa, and to Ralstonia solanacearum probable substate-binding periplasmic rsc1380 or rs04663 SWALL:Q8XZL5 (EMBL:AL646064) (517 aa) fasta scores: E(): 2.5e-150, 73.58% id in 511 aa, and to Escherichia coli O157:H7 transport protein z1054 or ecs0909 SWALL:Q8X6V9 (EMBL:AE005264) (512 aa) fasta scores: E(): 1.3e-128, 63.58% id in 508 aa; ABC transporter substrate-binding protein complement(1786763..1788325) Burkholderia pseudomallei K96243 3096450 YP_111316.1 CDS BPSS1307 NC_006351.1 1788561 1790600 R Similar to Agrobacterium tumefaciens mannopinic and agropinic acid catabolism protein MoaD SWALL:O50270 (EMBL:AF242881) (588 aa) fasta scores: E(): 1.8e-48, 48.4% id in 659 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1379 or rs04662 SWALL:Q8XZL6 (EMBL:AL646064) (627 aa) fasta scores: E(): 2.2e-76, 69.08% id in 676 aa, and to Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein rv1281c rv1281c or mt1318 or mtcy50.01 SWALL:YC81_MYCTU (SWALL:Q11040) (612 aa) fasta scores: E(): 4.2e-66, 46.01% id in 628 aa; ATP-binding ABC transporter protein complement(1788561..1790600) Burkholderia pseudomallei K96243 3096385 YP_111317.1 CDS BPSS1308 NC_006351.1 1790641 1791687 R Similar to Hordeum vulgare asparaginase SWALL:Q9FUG8 (EMBL:AF308474) (333 aa) fasta scores: E(): 5.1e-26, 39.45% id in 327 aa, and to Ralstonia solanacearum probable L-asparaginase precursor protein rsc1378 or rs04661 SWALL:Q8XZL7 (EMBL:AL646064) (320 aa) fasta scores: E(): 8.2e-30, 62.89% id in 345 aa, and to Oryza sativa L-asparaginase h0212b02.5 SWALL:Q9FSS5 (EMBL:AL442007) (333 aa) fasta scores: E(): 1.1e-27, 40.66% id in 332 aa; asparaginase complement(1790641..1791687) Burkholderia pseudomallei K96243 3096386 YP_111318.1 CDS BPSS1309 NC_006351.1 1791684 1792646 R Similar to Yersinia pestis hex regulon repressor HexR or ypo2065 SWALL:Q8ZET8 (EMBL:AJ414151) (289 aa) fasta scores: E(): 2.5e-09, 27.82% id in 266 aa, and to Ralstonia solanacearum hypothetical protein rsc1377 or rs04660 SWALL:Q8XZL8 (EMBL:AL646064) (332 aa) fasta scores: E(): 1.7e-58, 57.14% id in 308 aa, and to Clostridium perfringens probable transcriptional regulator cpe1082 SWALL:Q8XLF9 (EMBL:AP003189) (291 aa) fasta scores: E(): 1.8e-16, 30.79% id in 276 aa; transcriptional regulator complement(1791684..1792646) Burkholderia pseudomallei K96243 3095872 YP_111319.1 CDS BPSS1310 NC_006351.1 1792979 1795009 D Similar to Rhizobium meliloti glycine/proline betaine transporter betP SWALL:Q8VTN3 (EMBL:AF323271) (706 aa) fasta scores: E(): 7.9e-120, 48.71% id in 663 aa, and to Pasteurella multocida hypothetical protein Pm1791 pm1791 SWALL:Q9CK43 (EMBL:AE006216) (668 aa) fasta scores: E(): 3.1e-131, 50% id in 658 aa, and to Haemophilus influenzae probable transport protein Hi1706 hi1706 SWALL:YH06_HAEIN (SWALL:P45335) (669 aa) fasta scores: E(): 1.9e-123, 47.59% id in 664 aa; BCCT (betaine/carnitine/choline) family transporter 1792979..1795009 Burkholderia pseudomallei K96243 3097064 YP_111320.1 CDS estA NC_006351.1 1795244 1796458 R Similar to Pseudomonas marginata esterase EstB SWALL:Q9KX40 (EMBL:U33634) (392 aa) fasta scores: E(): 1.9e-96, 68.38% id in 389 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2315 SWALL:Q9I1G0 (EMBL:AE004657) (391 aa) fasta scores: E(): 2.3e-68, 52.46% id in 385 aa, and to Pseudomonas sp triacylglycerol lipase lip-1 SWALL:Q9KX30 (EMBL:X61673) (333 aa) fasta scores: E(): 1.4e-59, 53.65% id in 328 aa; esterase complement(1795244..1796458) Burkholderia pseudomallei K96243 3095112 YP_111321.1 CDS BPSS1311A NC_006351.1 1796638 1796973 D Similar to Chromobacterium violaceum ATCC 12472 hypothetical protein SWALL:Q7P1Q6 (EMBL:AE016910) (96 aa) fasta scores: E(): 8.1e-09, 46.07% id in 102 aa; hypothetical protein 1796638..1796973 Burkholderia pseudomallei K96243 3097065 YP_111322.1 CDS BPSS1312 NC_006351.1 1797052 1798512 D Similar to the N-terminal regions of Arabidopsis thaliana hypothetical 59.0 kDa protein at3g03520 SWALL:Q8VZ53 (EMBL:AY065242) (523 aa) fasta scores: E(): 4.6e-40, 35.03% id in 471 aa, and to Arabidopsis thaliana t21p5.6 protein t21p5.6 or at3g03520 SWALL:Q9SRQ6 (EMBL:AC009895) (523 aa) fasta scores: E(): 4.6e-40, 35.03% id in 471 aa; hypothetical protein 1797052..1798512 Burkholderia pseudomallei K96243 3095031 YP_111323.1 CDS BPSS1313 NC_006351.1 1799023 1799664 D Similar to Streptomyces coelicolor membrane protein sco3332 or sce68.30C SWALL:Q9WX02 (EMBL:AL939116) (238 aa) fasta scores: E(): 2e-06, 29.44% id in 180 aa; hypothetical protein 1799023..1799664 Burkholderia pseudomallei K96243 3096066 YP_111324.1 CDS BPSS1314 NC_006351.1 1799718 1800068 R hypothetical protein complement(1799718..1800068) Burkholderia pseudomallei K96243 3096067 YP_111325.1 CDS ileS NC_006351.1 1800598 1803501 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(1800598..1803501) Burkholderia pseudomallei K96243 3094966 YP_111326.1 CDS BPSS1316 NC_006351.1 1803585 1804523 R Similar to Rhodobacter capsulatus hypothetical 32.2 kDa protein SWALL:O68125 (EMBL:AF010496) (296 aa) fasta scores: E(): 7e-35, 38.62% id in 290 aa, and to Sphingomonas aromaticivorans hypothetical 34.0 kDa protein orf114 SWALL:O85844 (EMBL:AF079317) (309 aa) fasta scores: E(): 8.5e-28, 33.44% id in 296 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4287 pa4287 SWALL:Q9HWB3 (EMBL:AE004845) (296 aa) fasta scores: E(): 2.9e-22, 33.1% id in 287 aa; hypothetical protein complement(1803585..1804523) Burkholderia pseudomallei K96243 3096476 YP_111327.1 CDS BPSS1317 NC_006351.1 1804520 1805239 R Similar to Ralstonia solanacearum probable alanyl-tRNA synthetase related protein rsc0988 or rs04304 SWALL:Q8Y0Q5 (EMBL:AL646062) (245 aa) fasta scores: E(): 7.9e-18, 39.03% id in 228 aa, and to Bacillus anthracis alanyl-tRNA synthetase domain protein ba1720 SWALL:Q81SE0 (EMBL:AE017029) (236 aa) fasta scores: E(): 2.7e-16, 31.65% id in 218 aa. Similar to an internal region of Escherichia coli alanyl-tRNA synthetase AlaS or LovB SWALL:SYA_ECOLI (SWALL:P00957) (876 aa) fasta scores: E(): 4.5e-09, 29.87% id in 231 aa; alanyl-tRNA synthetase complement(1804520..1805239) Burkholderia pseudomallei K96243 3095157 YP_111328.1 CDS BPSS1318 NC_006351.1 1805789 1807282 R Similar to Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome], mitochondrial precursor DlD1 or Dld or ydl174C SWALL:DLD1_YEAST (SWALL:P32891) (587 aa) fasta scores: E(): 1.6e-53, 37.01% id in 489 aa, and to Ralstonia solanacearum D-lactate dehydrogenase Dld or rsc2664 or rs04542 SWALL:Q8XW11 (EMBL:AL646071) (472 aa) fasta scores: E(): 1.1e-101, 58.98% id in 451 aa, and to Rhizobium loti probable D-lactate dehydrogenase mll1488 SWALL:Q98KG4 (EMBL:AP002997) (575 aa) fasta scores: E(): 2.4e-99, 56.4% id in 445 aa. Possible alternative translational start; D-lactate dehydrogenase complement(1805789..1807282) Burkholderia pseudomallei K96243 3095158 YP_111329.1 CDS BPSS1319 NC_006351.1 1807422 1807718 R Similar to Rhizobium loti hypothetical protein Msl7859 SWALL:Q984S8 (EMBL:AP003012) (97 aa) fasta scores: E(): 1.4e-08, 38.29% id in 94 aa, and to Ralstonia solanacearum hypothetical protein rsc1128 or rs04625 SWALL:Q8Y0B6 (EMBL:AL646062) (96 aa) fasta scores: E(): 2e-08, 35.48% id in 93 aa, and to Rhizobium meliloti hypothetical protein r00331 or smc00411 SWALL:Q92SN9 (EMBL:AL591783) (95 aa) fasta scores: E(): 1.5e-07, 40.21% id in 92 aa; hypothetical protein complement(1807422..1807718) Burkholderia pseudomallei K96243 3095299 YP_111330.1 CDS BPSS1320 NC_006351.1 1807779 1808636 R hypothetical protein complement(1807779..1808636) Burkholderia pseudomallei K96243 3095931 YP_111331.1 CDS BPSS1321 NC_006351.1 1808641 1809741 R C-terminus is similar to the N-terminus of Haemophilus influenzae hypothetical protein Hi0912 hi0912 SWALL:Y912_HAEIN (SWALL:P44074) (254 aa) fasta scores: E(): 4.1e-05, 30% id in 150 aa; hypothetical protein complement(1808641..1809741) Burkholderia pseudomallei K96243 3095932 YP_111332.1 CDS BPSS1322 NC_006351.1 1810477 1811349 D Similar to Lactococcus lactis xylose regulatory protein XylR SWALL:Q9X421 (EMBL:AF092042) (319 aa) fasta scores: E(): 3.4e-05, 20.28% id in 281 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3269 SWALL:Q9HYX2 (EMBL:AE004749) (284 aa) fasta scores: E(): 7e-24, 33.81% id in 275 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu1081 or agr_c_1998 SWALL:Q8UGF7 (EMBL:AE009072) (285 aa) fasta scores: E(): 3e-23, 33.08% id in 272 aa; AraC family transcriptional regulator 1810477..1811349 Burkholderia pseudomallei K96243 3094941 YP_111333.1 CDS BPSS1323 NC_006351.1 1811570 1812529 R hypothetical protein complement(1811570..1812529) Burkholderia pseudomallei K96243 3096632 YP_111334.1 CDS BPSS1324 NC_006351.1 1812770 1813786 R catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase complement(1812770..1813786) Burkholderia pseudomallei K96243 3096633 YP_111335.1 CDS lrp NC_006351.1 1813979 1814488 D Similar to Klebsiella pneumoniae leucine-responsive regulatory protein Lrp SWALL:LRP_KLEPN (SWALL:P37424) (163 aa) fasta scores: E(): 3.1e-24, 45.09% id in 153 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0645 or rs05577 SWALL:Q8XS36 (EMBL:AL646080) (186 aa) fasta scores: E(): 1.7e-48, 75.88% id in 170 aa, and to Rhizobium leguminosarum leucine-responsive regulatory-like protein SWALL:AAO17689 (EMBL:AY172673) (158 aa) fasta scores: E(): 4.9e-27, 50% id in 150 aa; transcription regulator AsnC 1813979..1814488 Burkholderia pseudomallei K96243 3097167 YP_111336.1 CDS BPSS1326 NC_006351.1 1814887 1816338 D Similar to Xanthomonas campestris hypothetical protein Xcc3767 SWALL:AAM43024 (EMBL:AE012497) (277 aa) fasta scores: E(): 1.6e-07, 29.6% id in 304 aa, and to Xanthomonas axonopodis hypothetical protein Xac3820 SWALL:AAM38662 (EMBL:AE012031) (268 aa) fasta scores: E(): 3.3e-07, 29.53% id in 298 aa; hypothetical protein 1814887..1816338 Burkholderia pseudomallei K96243 3096550 YP_111337.1 CDS BPSS1327 NC_006351.1 1816540 1817895 R Similar to Burkholderia cepacia phthalate transporter OphD SWALL:Q9RPP3 (EMBL:AF152094) (448 aa) fasta scores: E(): 8.5e-47, 36.21% id in 428 aa, and to Caulobacter crescentus major facilitator family transporter cc2354 SWALL:Q9A5U3 (EMBL:AE005905) (430 aa) fasta scores: E(): 6.9e-79, 52.55% id in 430 aa, and to Agrobacterium tumefaciens MFS permease atu2708 or agr_c_4908 SWALL:Q8UBZ0 (EMBL:AE009217) (487 aa) fasta scores: E(): 3.4e-75, 49.05% id in 424 aa. Possible alternative translational start sites.; major facilitator superfamily sugar transporter protein complement(1816540..1817895) Burkholderia pseudomallei K96243 3096778 YP_111338.1 CDS BPSS1328 NC_006351.1 1818003 1818728 D Similar to Streptomyces griseus GntR-family transcriptional regulator DasR SWALL:Q8VV01 (EMBL:AB061860) (253 aa) fasta scores: E(): 1.1e-14, 31.33% id in 233 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1506 or rs03035 SWALL:Q8XPY0 (EMBL:AL646085) (240 aa) fasta scores: E(): 4.6e-66, 70.04% id in 237 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1997 or rs03565 SWALL:Q8XXW6 (EMBL:AL646067) (274 aa) fasta scores: E(): 3.3e-26, 35.34% id in 232 aa; GntR family transcriptional regulator 1818003..1818728 Burkholderia pseudomallei K96243 3096779 YP_111339.1 CDS BPSS1329 NC_006351.1 1818788 1820212 D Similar to Rhodococcus sp. 19070 benzoate transport protein BopK SWALL:Q93Q76 (EMBL:AF279141) (448 aa) fasta scores: E(): 3.4e-17, 27.94% id in 433 aa, and to Ralstonia solanacearum probable metabolite transport transmembrane protein rsp0234 or rs05189 SWALL:Q8XT81 (EMBL:AL646077) (416 aa) fasta scores: E(): 2.8e-51, 70.79% id in 428 aa, and to Pseudomonas aeruginosa probable MFS transporter pa2114 SWALL:Q9I201 (EMBL:AE004638) (423 aa) fasta scores: E(): 2.4e-35, 48.59% id in 428 aa. Possible alternative translational start sites.; major facilitator transporter 1818788..1820212 Burkholderia pseudomallei K96243 3096551 YP_111340.1 CDS BPSS1330 NC_006351.1 1820264 1821151 D Similar to Sphingomonas sp. LB126 fluorene degradation FldB protein SWALL:Q9L399 (EMBL:AJ277295) (295 aa) fasta scores: E(): 1.7e-19, 31.75% id in 274 aa, and to Ralstonia solanacearum probable hydrolase transmembrane protein rsp0233 or rs05190 SWALL:Q8XT82 (EMBL:AL646077) (302 aa) fasta scores: E(): 5.6e-61, 60.72% id in 275 aa, and to Yersinia pestis orf45 ypo1933 or y2378 SWALL:Q9ZC43 (EMBL:AL031866) (289 aa) fasta scores: E(): 1.4e-26, 35.35% id in 280 aa; hypothetical protein 1820264..1821151 Burkholderia pseudomallei K96243 3097088 YP_111341.1 CDS BPSS1331 NC_006351.1 1821570 1823045 D Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2492 or rs01104 SWALL:Q8XWI2 (EMBL:AL646070) (502 aa) fasta scores: E(): 6.5e-123, 66.4% id in 503 aa, and to Wolbachia sp. wri phosphoprotein phosphatase SWALL:Q9RBM2 (EMBL:AJ012073) (428 aa) fasta scores: E(): 9e-19, 28.91% id in 415 aa. Note: Also similar to BPSS0403 (479 aa) fasta scores: E(): 4.7e-135, 87.866% identity in 478 aa overlap; phosphatase 1821570..1823045 Burkholderia pseudomallei K96243 3097089 YP_111342.1 CDS BPSS1332 NC_006351.1 1823042 1824664 D Similar to Paracoccus denitrificans methylamine utilization protein MauG precursor SWALL:MAUG_PARDE (SWALL:Q51658) (387 aa) fasta scores: E(): 9.1e-14, 36.74% id in 381 aa, and to Ralstonia solanacearum probable signal peptide protein rsc2493 or rs01103 SWALL:Q8XWI1 (EMBL:AL646070) (449 aa) fasta scores: E(): 6.4e-93, 67.86% id in 417 aa, and to Ralstonia solanacearum probable lipoprotein transmembrane rsp1173 or rs05063 SWALL:Q8XQP8 (EMBL:AL646083) (441 aa) fasta scores: E(): 4.5e-42, 39.9% id in 421 aa; cytochrome-c methylamine utilization protein 1823042..1824664 Burkholderia pseudomallei K96243 3095177 YP_111343.1 CDS BPSS1333 NC_006351.1 1824843 1825703 D Similar to Rhizobium loti hypothetical protein Mlr0915 SWALL:Q98LR1 (EMBL:AP002996) (299 aa) fasta scores: E(): 8.2e-25, 37.85% id in 280 aa, and to Bacillus subtilis hypothetical protein YktD SWALL:Q45500 (EMBL:AF012285) (304 aa) fasta scores: E(): 2.1e-15, 29.61% id in 287 aa, and to Methanosarcina acetivorans hypothetical protein Ma2904 SWALL:Q8TLW9 (EMBL:AE010992) (313 aa) fasta scores: E(): 1.2e-13, 32.85% id in 207 aa; hypothetical protein 1824843..1825703 Burkholderia pseudomallei K96243 3097199 YP_111344.1 CDS BPSS1334 NC_006351.1 1826391 1826663 D Similar to Ralstonia solanacearum hypothetical protein rsp0427 or rs00886 SWALL:Q8XSP0 (EMBL:AL646078) (91 aa) fasta scores: E(): 7.9e-10, 44.94% id in 89 aa; hypothetical protein 1826391..1826663 Burkholderia pseudomallei K96243 3097200 YP_111345.1 CDS BPSS1335 NC_006351.1 1827019 1827231 D Similar to Ralstonia solanacearum hypothetical protein rsc0762 or rs05091 SWALL:Q8Y1C8 (EMBL:AL646060) (68 aa) fasta scores: E(): 2.5e-19, 86.27% id in 51 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0200 SWALL:Q9I6T8 (EMBL:AE004458) (70 aa) fasta scores: E(): 1.2e-17, 65.21% id in 69 aa; hypothetical protein 1827019..1827231 Burkholderia pseudomallei K96243 3096197 YP_111346.1 CDS BPSS1336 NC_006351.1 1827569 1828078 R Similar to Ralstonia solanacearum probable acetyltransferase rsp0265 or rs03701 SWALL:Q8XT50 (EMBL:AL646077) (184 aa) fasta scores: E(): 4.3e-32, 58.68% id in 167 aa, and to C-terminus of Myxococcus xanthus acetyltransferase ActC SWALL:Q93P57 (EMBL:AF350253) (437 aa) fasta scores: E(): 4.8e-19, 42.77% id in 166 aa, and to entire protein of Deinococcus radiodurans hypothetical protein Dr2432 SWALL:Q9RRQ6 (EMBL:AE002073) (173 aa) fasta scores: E(): 1.6e-13, 39.21% id in 153 aa; acetyltransferase complement(1827569..1828078) Burkholderia pseudomallei K96243 3095720 YP_111347.1 CDS BPSS1337 NC_006351.1 1828173 1828595 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0437 or rs03406 SWALL:Q8Y299 (EMBL:AL646059) (137 aa) fasta scores: E(): 6e-32, 70.14% id in 134 aa, and to uncultured proteobacterium conserved hypothetical protein ebac000-60d04.57 SWALL:AAM48689 (EMBL:AE008921) (141 aa) fasta scores: E(): 1.2e-22, 57.93% id in 126 aa; hypothetical protein complement(1828173..1828595) Burkholderia pseudomallei K96243 3095721 YP_111348.1 CDS BPSS1338 NC_006351.1 1828597 1829031 R Similar to Ralstonia solanacearum probable transmembrane protein rsc0438 or rs03407 SWALL:Q8Y298 (EMBL:AL646059) (144 aa) fasta scores: E(): 3.5e-32, 67.36% id in 144 aa, and to Vibrio cholerae hypothetical protein Vca0641 SWALL:Q9KLV0 (EMBL:AE004394) (139 aa) fasta scores: E(): 6.1e-17, 48.14% id in 135 aa, and to Rhizobium meliloti hypothetical protein ra0570 or sma1053 SWALL:Q92ZC0 (EMBL:AE007247) (136 aa) fasta scores: E(): 6.2e-16, 51.53% id in 130 aa; hypothetical protein complement(1828597..1829031) Burkholderia pseudomallei K96243 3096995 YP_111349.1 CDS BPSS1339 NC_006351.1 1829021 1829368 R Similar to Rhizobium leguminosarum nodulation regulator NolR protein SWALL:O54057 (EMBL:AJ001934) (105 aa) fasta scores: E(): 4.5e-09, 40.86% id in 93 aa, and to Rhizobium loti transcriptional regulator mlr2159 SWALL:Q98J11 (EMBL:AP002999) (112 aa) fasta scores: E(): 6.8e-15, 52.63% id in 95 aa, and to Agrobacterium tumefaciens transcriptional regulator, ArsR family atu3466 or agr_l_2725 SWALL:Q8UAA8 (EMBL:AE009276) (117 aa) fasta scores: E(): 9.7e-15, 49.49% id in 99 aa; transcription regulator ArsR complement(1829021..1829368) Burkholderia pseudomallei K96243 3095311 YP_111350.1 CDS BPSS1340 NC_006351.1 1829882 1830415 D Similar to Escherichia coli, and Shigella flexneri cytochrome b561 CybB or b1418 or sf1794 SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 1.3e-07, 26.59% id in 173 aa, and to Xanthomonas axonopodis cytochrome like b561 xac1686 SWALL:AAM36553 (EMBL:AE011801) (173 aa) fasta scores: E(): 2.8e-12, 34.54% id in 165 aa, and to Rhizobium loti cytochrome b561 mlr4647 SWALL:Q98DL7 (EMBL:AP003004) (179 aa) fasta scores: E(): 1.1e-11, 32.35% id in 170 aa; transmembrane cytochrome b561 1829882..1830415 Burkholderia pseudomallei K96243 3095312 YP_111351.1 CDS BPSS1341 NC_006351.1 1830706 1832688 R Similar to Mycobacterium paratuberculosis probable cysteine desulfurase SWALL:CSD_MYCPA (SWALL:Q9KII6) (685 aa) fasta scores: E(): 1e-86, 53.23% id in 680 aa, and to Mycobacterium leprae probable cysteine desulfurase 1 Csd1 or ml0842 or mlcb22.44C SWALL:CSD1_MYCLE (SWALL:O32975) (611 aa) fasta scores: E(): 1.7e-81, 54.9% id in 632 aa. C-terminal region is similar to Erwinia chrysanthemi cysteine desulfurase SufS SWALL:Q9EXP2 (EMBL:AJ301654) (412 aa) fasta scores: E(): 4e-57, 52.64% id in 397 aa; cysteine desulfurase complement(1830706..1832688) Burkholderia pseudomallei K96243 3096157 YP_111352.1 CDS BPSS1342 NC_006351.1 1832696 1833628 R Similar to Synechococcus sp. cysteine biosynthesis SrpI protein SWALL:SRPI_SYNP7 (SWALL:Q55032) (306 aa) fasta scores: E(): 1.3e-86, 73.59% id in 303 aa, and to Mycobacterium paratuberculosis 35 kDa protein SWALL:Q9RAJ4 (EMBL:AJ250887) (307 aa) fasta scores: E(): 9.6e-84, 69.38% id in 307 aa, and to Mycobacterium paratuberculosis major membrane protein-1 SWALL:Q9KII7 (EMBL:AF232751) (295 aa) fasta scores: E(): 3.6e-82, 70.84% id in 295 aa. Possible alternative start site at codon 29; hypothetical protein complement(1832696..1833628) Burkholderia pseudomallei K96243 3097085 YP_111353.1 CDS BPSS1343 NC_006351.1 1833749 1834033 R Similar to Streptomyces griseus SgraiC control protein SWALL:Q9F6L1 (EMBL:AF290880) (79 aa) fasta scores: E(): 7.6e-05, 41.42% id in 70 aa, and to Rhizobium meliloti hypothetical transcription regulator protein smc02184 r00496 or smc02184 SWALL:Q92SB3 (EMBL:AL591783) (89 aa) fasta scores: E(): 2.8e-05, 44.04% id in 84 aa; DNA-binding protein complement(1833749..1834033) Burkholderia pseudomallei K96243 3097086 YP_111354.1 CDS BPSS1344 NC_006351.1 1834030 1835019 R Similar to Synechococcus sp. serine acetyltransferase, plasmid SrpH SWALL:SRPH_SYNP7 (SWALL:Q59967) (319 aa) fasta scores: E(): 3.4e-54, 58.05% id in 267 aa, and to Trypanosoma cruzi serine acetyltransferase Sat SWALL:Q9BKB1 (EMBL:AF296848) (348 aa) fasta scores: E(): 3.8e-28, 47.44% id in 196 aa, and to Entamoeba histolytica serine acetyltransferase EhsaT SWALL:Q9U8X2 (EMBL:AB023954) (305 aa) fasta scores: E(): 1.4e-25, 46.99% id in 183 aa; serine acetyltransferase complement(1834030..1835019) Burkholderia pseudomallei K96243 3097027 YP_111355.1 CDS BPSS1345 NC_006351.1 1835134 1835601 R Similar to Ralstonia solanacearum hypothetical protein rsc1257 or rs02773 SWALL:Q8XZY8 (EMBL:AL646063) (158 aa) fasta scores: E(): 6.1e-21, 49.36% id in 158 aa, and to Ralstonia solanacearum hypothetical protein rsc0296 rsc0296 or rs03263 SWALL:Q8Y2N9 (EMBL:AL646058) (130 aa) fasta scores: E(): 8.9e-17, 46.82% id in 126 aa, and to Mycobacterium tuberculosis hypothetical protein rv0390 or mtcy04d9.02 SWALL:P95198 (EMBL:Z84725) (140 aa) fasta scores: E(): 3e-12, 49.29% id in 142 aa; hypothetical protein complement(1835134..1835601) Burkholderia pseudomallei K96243 3095318 YP_111356.1 CDS BPSS1346 NC_006351.1 1835968 1838085 D Similar to Novosphingobium capsulatum prolyl oligopeptidase SWALL:Q9ZNM8 (EMBL:AB010298) (723 aa) fasta scores: E(): 1.7e-36, 29.04% id in 699 aa, and to Caulobacter crescentus prolyl oligopeptidase cc3687 SWALL:Q9A279 (EMBL:AE006026) (723 aa) fasta scores: E(): 1.9e-81, 37.78% id in 704 aa, and to Rhizobium sp. probable peptidase Y4nA SWALL:Y4NA_RHISN (SWALL:P55577) (726 aa) fasta scores: E(): 3.6e-80, 38.08% id in 709 aa; peptidase 1835968..1838085 Burkholderia pseudomallei K96243 3095319 YP_111357.1 CDS BPSS1347 NC_006351.1 1838603 1839856 R Similar to Neisseria gonorrhoeae efflux pump protein FarA SWALL:Q9RQ30 (EMBL:AF132909) (394 aa) fasta scores: E(): 6.5e-48, 48.46% id in 359 aa, and to Ralstonia solanacearum probable multidrug resistance A EmrA or rsc1293 or rs02806 SWALL:Q8XZV2 (EMBL:AL646063) (428 aa) fasta scores: E(): 6e-57, 47.76% id in 402 aa, and to Xanthomonas campestris multidrug resistance efflux pump PmrA or xcc1399 SWALL:AAM40697 (EMBL:AE012239) (397 aa) fasta scores: E(): 1.1e-49, 44.22% id in 398 aa; HlyD family efflux pump protein complement(1838603..1839856) Burkholderia pseudomallei K96243 3097138 YP_111358.1 CDS BPSS1348 NC_006351.1 1840349 1841932 R Similar to Burkholderia cepacia Fusaric acid resistance protein precursor FusA SWALL:FUSA_BURCE (SWALL:P24126) (530 aa) fasta scores: E(): 9.3e-28, 31.74% id in 526 aa, and to Xanthomonas axonopodis outer membrane efflux protein YjcP or xac1444 SWALL:AAM36315 (EMBL:AE011776) (496 aa) fasta scores: E(): 7.2e-38, 38.41% id in 505 aa, and to Ralstonia solanacearum outer membrane chanel lipoprotein rsc1294 or rs02807 SWALL:Q8XZV1 (EMBL:AL646063) (489 aa) fasta scores: E(): 9.2e-38, 37.88% id in 483 aa; outer membrane efflux protein complement(1840349..1841932) Burkholderia pseudomallei K96243 3096813 YP_111359.1 CDS BPSS1349 NC_006351.1 1842237 1843232 R Similar to Shigella flexneri dTDP-rhamnosyl transferase RfbF or sf2099 SWALL:RFBF_SHIFL (SWALL:P37782) (296 aa) fasta scores: E(): 7.7e-16, 25% id in 312 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1130 SWALL:Q9I4K5 (EMBL:AE004543) (325 aa) fasta scores: E(): 5.3e-42, 45.19% id in 312 aa, and to Ralstonia solanacearum probable dTDP-rhamnosyl transferase RfbF or rsc0687 or rs01592 SWALL:Q8Y1K3 (EMBL:AL646060) (309 aa) fasta scores: E(): 2.1e-30, 40.51% id in 311 aa; dTDP-rhamnosyl transferase complement(1842237..1843232) Burkholderia pseudomallei K96243 3096814 YP_111360.1 CDS BPSS1350 NC_006351.1 1843461 1845047 R Similar to Escherichia coli, and Escherichia coli O157:H7 multidrug resistance protein B EmrB or b2686 or z3987 or ecs3548 SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 7.5e-88, 45.34% id in 505 aa, and to Burkholderia pseudomallei hypothetical 55.5 kDa protein SWALL:Q9ZF72 (EMBL:AF110185) (520 aa) fasta scores: E(): 3.8e-114, 56.73% id in 527 aa, and to Burkholderia cepacia multidrug efflux protein BcrA SWALL:Q937U9 (EMBL:AJ347753) (518 aa) fasta scores: E(): 9e-103, 53.83% id in 522 aa; efflux/sugar transport/multidrug resistance protein complement(1843461..1845047) Burkholderia pseudomallei K96243 3096889 YP_111361.1 CDS BPSS1351 NC_006351.1 1845044 1846363 R Similar to Pseudomonas aeruginosa rhamnosyltransferase chain B RhlB or pa3478 SWALL:Q9HYD1 (EMBL:AE004768) (426 aa) fasta scores: E(): 6.3e-48, 48% id in 427 aa, and to Candida albicans UDP-glucose:sterol glucosyltransferase ugt51c1 SWALL:Q9Y752 (EMBL:AF091398) (1516 aa) fasta scores: E(): 9.5e-09, 25.31% id in 403 aa; rhamnosyltransferase complement(1845044..1846363) Burkholderia pseudomallei K96243 3097051 YP_111362.1 CDS BPSS1352 NC_006351.1 1846596 1847495 R Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 subunit A RhlA or pa3479 SWALL:RHLA_PSEAE (SWALL:Q51559) (295 aa) fasta scores: E(): 2.7e-45, 48.49% id in 266 aa, and to Pseudomonas aeruginosa 3- hydroxyacyl-CoA-acyl carrier protein transferase PhaG or Qin or pa0730 SWALL:PHAG_PSEAE (SWALL:Q51553) (300 aa) fasta scores: E(): 2.4e-43, 43.11% id in 276 aa, and to Pseudomonas putida 3- hydroxyacyl-CoA-acyl carrier protein transferase PhaG SWALL:PHAG_PSEPU (SWALL:O85207) (295 aa) fasta scores: E(): 3.5e-42, 43.01% id in 272 aa; fatty acid biosynthetic protein complement(1846596..1847495) Burkholderia pseudomallei K96243 3097052 YP_111363.1 CDS betI NC_006351.1 1848477 1849064 D HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 1848477..1849064 Burkholderia pseudomallei K96243 3096015 YP_111364.1 CDS betB NC_006351.1 1849107 1850576 D catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1849107..1850576 Burkholderia pseudomallei K96243 3096019 YP_111365.1 CDS betA NC_006351.1 1850596 1852293 D catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1850596..1852293 Burkholderia pseudomallei K96243 3096018 YP_111366.1 CDS BPSS1356 NC_006351.1 1853417 1856794 D hypothetical protein 1853417..1856794 Burkholderia pseudomallei K96243 3096459 YP_111367.1 CDS BPSS1357 NC_006351.1 1857019 1858455 D Similar to Acinetobacter calcoaceticus 4-hydroxybenzoate transporter PcaK SWALL:PCAK_ACICA (SWALL:Q43975) (457 aa) fasta scores: E(): 2.2e-36, 30.24% id in 453 aa, and to Ralstonia solanacearum probable metabolite transport transmembrane protein rsp0052 or rs02027 SWALL:Q8XTQ4 (EMBL:AL646076) (476 aa) fasta scores: E(): 1e-145, 82.27% id in 474 aa, and to Pseudomonas aeruginosa probable MFS transporter pa3467 SWALL:Q9HYD9 (EMBL:AE004767) (455 aa) fasta scores: E(): 3.5e-124, 70.56% id in 462 aa; MFS sugar transporter 1857019..1858455 Burkholderia pseudomallei K96243 3095250 YP_111368.1 CDS BPSS1358 NC_006351.1 1858536 1860014 R Similar to Erwinia chrysanthemi regulator HrpX SWALL:AAM46691 (EMBL:AF448202) (450 aa) fasta scores: E(): 8.4e-24, 28.46% id in 390 aa, and similar to the C-terminus of Pseudomonas aeruginosa probable two-component sensor pa0600 from codon 129 SWALL:Q9I5T8 (EMBL:AE004496) (797 aa) fasta scores: E(): 1.2e-36, 38.79% id in 366 aa, and to similar to the C-terminus of Ralstonia solanacearum probable transmembrane two component system sensor kinase transcription regulator protein rsc0191 or rs00623 from codon 254 SWALL:Q8Y2Z0 (EMBL:AL646057) (458 aa) fasta scores: E(): 7.7e-28, 44.87% id in 234 aa; sensor kinase complement(1858536..1860014) Burkholderia pseudomallei K96243 3095251 YP_111369.1 CDS BPSS1359 NC_006351.1 1860011 1860463 R Similar to Synechocystis sp. response regulator Rcp1 or slr0474 SWALL:RCP1_SYNY3 (SWALL:Q55169) (147 aa) fasta scores: E(): 9.3e-25, 48.98% id in 147 aa, and to Anabaena sp. two-component response regulator alr1967 SWALL:Q8YVK8 (EMBL:AP003587) (148 aa) fasta scores: E(): 3.6e-30, 57.24% id in 138 aa, and to Methanosarcina acetivorans response regulator receiver ma1268 SWALL:Q8TRB2 (EMBL:AE010795) (148 aa) fasta scores: E(): 2.8e-29, 58.39% id in 137 aa; response regulator protein complement(1860011..1860463) Burkholderia pseudomallei K96243 3096351 YP_111370.1 CDS BPSS1360 NC_006351.1 1860467 1862680 R C-terminus is similar to the C-terminal regions of Anabaena sp. cyanobacterial phytochrome A AphA or ALR3157 SWALL:PHYA_ANASP (SWALL:Q9LCC2) (765 aa) fasta scores: E(): 3.5e-45, 54.78% id in 261 aa, and to Methanosarcina acetivorans sensory transduction histidine kinase MA1270 SWALL:Q8TRB0 (EMBL:AE010795) (1456 aa) fasta scores: E(): 4.8e-62, 41.14% id in 508 aa; two-component sensor kinase complement(1860467..1862680) Burkholderia pseudomallei K96243 3094977 YP_111371.1 CDS BPSS1361 NC_006351.1 1863240 1863725 R Similar to Vibrio cholerae hypothetical protein Vca0330 SWALL:Q9KMK9 (EMBL:AE004371) (162 aa) fasta scores: E(): 1.4e-32, 53.94% id in 152 aa, and to Xanthomonas campestris hypothetical protein Xcc2248 SWALL:AAM41527 (EMBL:AE012332) (156 aa) fasta scores: E(): 1.1e-13, 39.33% id in 150 aa, and to Agrobacterium tumefaciens hypothetical protein atu1003 or agr_c_1844 SWALL:Q8UGN3 (EMBL:AE009065) (176 aa) fasta scores: E(): 5.1e-13, 34.64% id in 153 aa; stress-induced protein complement(1863240..1863725) Burkholderia pseudomallei K96243 3094978 YP_111372.1 CDS BPSS1362 NC_006351.1 1863764 1864696 R Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase complement(1863764..1864696) Burkholderia pseudomallei K96243 3097270 YP_111373.1 CDS BPSS1363 NC_006351.1 1865456 1865911 D Similar to Ralstonia solanacearum probable alanin-rich signal peptide protein rsp1518 or rs04795 SWALL:Q8XPW8 (EMBL:AL646085) (178 aa) fasta scores: E(): 2.5e-09, 47.61% id in 168 aa; hypothetical protein 1865456..1865911 Burkholderia pseudomallei K96243 3096007 YP_111374.1 CDS cspD NC_006351.1 1866688 1866891 R Similar to Shewanella violacea cold shock-like protein CspG SWALL:Q9S170 (EMBL:AB022716) (70 aa) fasta scores: E(): 8.6e-17, 70.76% id in 65 aa, and to Ralstonia solanacearum probable cold shock-like transcription regulator protein CspD3 or rsp0002 or rs05790 SWALL:Q8XTV2 (EMBL:AL646076) (67 aa) fasta scores: E(): 4.6e-20, 78.78% id in 66 aa, and to Burkholderia multivorans cold-shock protein CspD SWALL:Q8RL32 (EMBL:AY089707) (68 aa) fasta scores: E(): 6e-19, 75.38% id in 65 aa; cold shock-like protein complement(1866688..1866891) Burkholderia pseudomallei K96243 3096537 YP_111375.1 CDS rpsU NC_006351.1 1867543 1867755 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1867543..1867755 Burkholderia pseudomallei K96243 3095643 YP_111376.1 CDS folB NC_006351.1 1868394 1868855 R Similar to Ralstonia solanacearum dihydroneopterin aldolase FolB2 or rsc1105 or rs04050 SWALL:Q8Y0D9 (EMBL:AL646062) (148 aa) fasta scores: E(): 1.3e-37, 70.42% id in 142 aa, and to Ralstonia solanacearum probable dihydroneopterin aldolase FolB1 or rsp0050 or rs02025 SWALL:Q8XTQ6 (EMBL:AL646076) (148 aa) fasta scores: E(): 1e-36, 69.01% id in 142 aa; dihydroneopterin aldolase complement(1868394..1868855) Burkholderia pseudomallei K96243 3095385 YP_111377.1 CDS soxG NC_006351.1 1868855 1869490 R Similar to Corynebacterium sp. sarcosine oxidase gamma subunit SoxG SWALL:SOXG_CORS1 (SWALL:Q46338) (203 aa) fasta scores: E(): 1.6e-11, 32.98% id in 191 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxG2 or rsc1104 or rs04053 SWALL:Q8Y0E0 (EMBL:AL646062) (210 aa) fasta scores: E(): 2.8e-62, 75.71% id in 210 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxG1 or rsp0049 or rs02024 SWALL:Q8XTQ7 (EMBL:AL646076) (210 aa) fasta scores: E(): 2.8e-59, 73.81% id in 210 aa; sarcosine oxidase gamma subunit complement(1868855..1869490) Burkholderia pseudomallei K96243 3095987 YP_111378.1 CDS soxA NC_006351.1 1869480 1872488 R Similar to Corynebacterium sp. sarcosine oxidase alpha subunit SoxA SWALL:SOXA_CORS1 (SWALL:Q46337) (967 aa) fasta scores: E(): 2.3e-145, 46.45% id in 1014 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxA2 or rsc1103 or rs04054 SWALL:Q8Y0E1 (EMBL:AL646062) (1003 aa) fasta scores: E(): 0, 86.14% id in 1003 aa, and to Pseudomonas aeruginosa sarcosine oxidase alpha subunit SoxA or pa5418 SWALL:Q9HTE6 (EMBL:AE004954) (1005 aa) fasta scores: E(): 1.3e-211, 57.46% id in 1011 aa; sarcosine oxidase alpha subunit complement(1869480..1872488) Burkholderia pseudomallei K96243 3095685 YP_111379.1 CDS soxD NC_006351.1 1872485 1872775 R Similar to Corynebacterium sp. sarcosine oxidase delta subunit SoxD SWALL:SOXD_CORS1 (SWALL:Q46336) (98 aa) fasta scores: E(): 1.9e-19, 55.81% id in 86 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxD2 or rsc1102 or rs04055 SWALL:Q8Y0E2 (EMBL:AL646062) (98 aa) fasta scores: E(): 3.4e-31, 76.66% id in 90 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxD1 or rsp0047 or rs02022 SWALL:Q8XTQ9 (EMBL:AL646076) (107 aa) fasta scores: E(): 6.9e-30, 74.72% id in 91 aa; sarcosine oxidase delta subunit complement(1872485..1872775) Burkholderia pseudomallei K96243 3095986 YP_111380.1 CDS soxB NC_006351.1 1873103 1874347 R Similar to Corynebacterium sp. sarcosine oxidase beta subunit SoxB SWALL:SOXB_CORS1 (SWALL:P40875) (405 aa) fasta scores: E(): 1.1e-105, 65.91% id in 399 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxB1 or rsp0046 or rs06046 SWALL:Q8XTR0 (EMBL:AL646076) (414 aa) fasta scores: E(): 3.8e-157, 95.65% id in 414 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxB2 or rsc1101 or rs04056 SWALL:Q8Y0E3 (EMBL:AL646062) (414 aa) fasta scores: E(): 1.6e-156, 94.92% id in 414 aa; sarcosine oxidase beta subunit complement(1873103..1874347) Burkholderia pseudomallei K96243 3096357 YP_111381.1 CDS sdaB NC_006351.1 1874364 1875749 R Similar to Escherichia coli L-serine dehydratase 2 SdaB or b2797 SWALL:SDHM_ECOLI (SWALL:P30744) (455 aa) fasta scores: E(): 1.3e-84, 50.86% id in 462 aa, and to Ralstonia solanacearum probable L-serine dehydratase SdaA1 or rsp0045 or rs02020 SWALL:Q8XTR1 (EMBL:AL646076) (461 aa) fasta scores: E(): 1.1e-162, 90.88% id in 461 aa, and to Ralstonia solanacearum probable L-serine dehydratase SdaA2 or rsc3296 or rs02527 SWALL:Q8XU97 (EMBL:AL646074) (458 aa) fasta scores: E(): 5.4e-121, 67.89% id in 461 aa; L-serine dehydratase complement(1874364..1875749) Burkholderia pseudomallei K96243 3095866 YP_111382.1 CDS BPSS1371 NC_006351.1 1876037 1877203 D Similar to Streptomyces griseus transcriptional regulator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 3.6e-18, 30.97% id in 339 aa, and to Ralstonia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein rsc1098 or rs04066 SWALL:Q8Y0E6 (EMBL:AL646062) (360 aa) fasta scores: E(): 8.7e-115, 84.4% id in 359 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0044 or rs02019 SWALL:Q8XTR2 (EMBL:AL646076) (387 aa) fasta scores: E(): 1.2e-111, 82.81% id in 355 aa. CDS is extended in the C-terminus in comparison to some orthologues; AraC family transcriptional regulator 1876037..1877203 Burkholderia pseudomallei K96243 3096008 YP_111383.1 CDS BPSS1372 NC_006351.1 1877566 1877817 R Similar to Pseudomonas aeruginosa hypothetical protein Pa2487 pa2487 SWALL:Q9I0Z5 (EMBL:AE004676) (90 aa) fasta scores: E(): 8.9e-12, 50% id in 80 aa; hypothetical protein complement(1877566..1877817) Burkholderia pseudomallei K96243 3094985 YP_111384.1 CDS BPSS1373 NC_006351.1 1878010 1878714 R Similar to Vibrio cholerae hypothetical protein Vca0740 SWALL:Q9KLK3 (EMBL:AE004403) (216 aa) fasta scores: E(): 1.8e-28, 48.34% id in 211 aa, and to Vibrio vulnificus uncharacterized protein conserved in bacteria vv20756 SWALL:AAO07687 (EMBL:AE016810) (220 aa) fasta scores: E(): 8.2e-27, 48.38% id in 217 aa, and to Rhizobium loti hypothetical protein Mll4256 SWALL:Q98EG3 (EMBL:AP003003) (209 aa) fasta scores: E(): 4.5e-26, 44.11% id in 204 aa; hypothetical protein complement(1878010..1878714) Burkholderia pseudomallei K96243 3095493 YP_111385.1 CDS BPSS1374 NC_006351.1 1878950 1879678 R Similar to Ralstonia solanacearum probable glutathione S-transferase rsc3070 or rs00514 SWALL:Q8XUW3 (EMBL:AL646073) (238 aa) fasta scores: E(): 4.1e-53, 59.75% id in 241 aa, and to Rhizobium meliloti probable glutathione S-transferase Gst12 or rb1278 or smb21449 SWALL:Q92U61 (EMBL:AL603646) (240 aa) fasta scores: E(): 1.1e-49, 56.19% id in 242 aa, and to Xanthomonas axonopodis glutathione transferase xac3203 SWALL:AAM38047 (EMBL:AE011966) (241 aa) fasta scores: E(): 1.2e-48, 56.96% id in 244 aa; glutathione-S-transferase complement(1878950..1879678) Burkholderia pseudomallei K96243 3095494 YP_111386.1 CDS BPSS1375 NC_006351.1 1880830 1881387 R C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein Pa2187 SWALL:Q9I1S8 (EMBL:AE004645) (141 aa) fasta scores: E(): 2.5e-18, 51.35% id in 111 aa, and Agrobacterium tumefaciens hypothetical protein atu3812 or agr_l_2041 SWALL:Q8U9B6 (EMBL:AE009312) (135 aa) fasta scores: E(): 8.2e-17, 45.65% id in 138 aa; hypothetical protein complement(1880830..1881387) Burkholderia pseudomallei K96243 3096334 YP_111387.1 CDS BPSS1376 NC_006351.1 1882053 1883063 R Similar to Rhodobacter sphaeroides quinol oxidase subunit II QxtB SWALL:O86081 (EMBL:AF084032) (335 aa) fasta scores: E(): 9e-62, 48.94% id in 331 aa, and to Ralstonia solanacearum transmembrane cytochrome bd-II oxidase rsp1206 or rs03150 SWALL:Q8XQL6 (EMBL:AL646083) (336 aa) fasta scores: E(): 7.1e-94, 69.34% id in 336 aa, and to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioB or pa3929 SWALL:O07441 (EMBL:Y10528) (335 aa) fasta scores: E(): 1.7e-66, 51.04% id in 335 aa; quinol oxidase subunit complement(1882053..1883063) Burkholderia pseudomallei K96243 3095459 YP_111388.1 CDS BPSS1377 NC_006351.1 1883053 1884498 R Similar to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioA or pa3930 SWALL:O07440 (EMBL:Y10528) (488 aa) fasta scores: E(): 4.2e-82, 48.84% id in 475 aa, and to Ralstonia solanacearum transmembrane cytochrome bd-II oxidase rsp1207 or rs03151 SWALL:Q8XQL5 (EMBL:AL646083) (482 aa) fasta scores: E(): 3.3e-117, 65.31% id in 470 aa, and to Xanthomonas campestris cyanide insensitive terminal oxidase CioA or xcc3691 SWALL:AAM43463 (EMBL:AE012490) (471 aa) fasta scores: E(): 1e-82, 50.31% id in 471 aa; ubiquinol cytochrome c cyanide insensitive terminal oxidase complement(1883053..1884498) Burkholderia pseudomallei K96243 3095460 YP_111389.1 CDS BPSS1378 NC_006351.1 1884733 1885158 R Similar to Rhizobium meliloti hypothetical signal peptide protein smc00921 r00784 or smc00921 SWALL:Q92KL7 (EMBL:AL591784) (128 aa) fasta scores: E(): 1.1e-10, 45.52% id in 123 aa, and to Rhizobium loti hypothetical protein Mlr5326 SWALL:Q98C23 (EMBL:AP003006) (130 aa) fasta scores: E(): 1.1e-10, 44.44% id in 117 aa; hypothetical protein complement(1884733..1885158) Burkholderia pseudomallei K96243 3095594 YP_111390.1 CDS BPSS1379 NC_006351.1 1885379 1886074 D Similar to Oceanobacillus iheyensis cation-transporting ATPase ob0089 SWALL:BAC12045 (EMBL:AP004593) (232 aa) fasta scores: E(): 1e-20, 46.02% id in 176 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YhiD or b3508 or z4920 or ecs4388 SWALL:YHID_ECOLI (SWALL:P26606) (215 aa) fasta scores: E(): 1.8e-21, 40.84% id in 213 aa, and to Escherichia coli O6 hypothetical protein YhiD or c4319 SWALL:AAN82755 (EMBL:AE016768) (215 aa) fasta scores: E(): 2.8e-21, 40.37% id in 213 aa; transmembrane transporter protein 1885379..1886074 Burkholderia pseudomallei K96243 3096202 YP_111391.1 CDS BPSS1380 NC_006351.1 1886113 1886403 D hypothetical protein 1886113..1886403 Burkholderia pseudomallei K96243 3096203 YP_111392.1 CDS BPSS1381 NC_006351.1 1886475 1888661 D Similar to Rhizobium meliloti phospholipase rb0094 or smb20094 SWALL:Q92X68 (EMBL:AL603642) (590 aa) fasta scores: E(): 3.3e-51, 39.47% id in 461 aa, and to Caulobacter crescentus phospholipase D family protein cc0522 SWALL:Q9AAS4 (EMBL:AE005724) (505 aa) fasta scores: E(): 1.7e-42, 36.4% id in 478 aa, and to Caulobacter crescentus membrane protein, cc1538 SWALL:Q9A826 (EMBL:AE005828) (239 aa) fasta scores: E(): 3.3e-14, 33.19% id in 235 aa; transmembrane phospholipase 1886475..1888661 Burkholderia pseudomallei K96243 3095657 YP_111393.1 CDS BPSS1382 NC_006351.1 1888658 1889674 D Similar to Brucella melitensis dioxygenase BmeII0240 SWALL:Q8YDD7 (EMBL:AE009663) (285 aa) fasta scores: E(): 4.9e-14, 36.36% id in 231 aa, and to Rhizobium loti hypothetical protein Mlr2853 mlr2853 SWALL:Q98HI7 (EMBL:AP003000) (246 aa) fasta scores: E(): 2.2e-13, 36.54% id in 249 aa. C-terminus is extended in comparison to similar proteins; hypothetical protein 1888658..1889674 Burkholderia pseudomallei K96243 3095789 YP_111394.1 CDS BPSS1383 NC_006351.1 1889557 1890045 D hypothetical protein 1889557..1890045 Burkholderia pseudomallei K96243 3095790 YP_111395.1 CDS BPSS1383a NC_006351.1 1890320 1891054 R Weakly similar to Ralstonia solanacearum isomerase rotamase signal peptide protein rsc1744 or rs02932 SWALL:Q8XYL4 (EMBL:AL646066) (255 aa) fasta scores: E(): 1.3e-10, 28.44% id in 225 aa. C-terminus is similar to the C-terminal region of Nitrosomonas europaea PpiC-type peptidyl-prolyl cis-trans isomerase ne1418 SWALL:Q82UR3 (EMBL:BX321861) (264 aa) fasta scores: E(): 7.1e-10, 30.04% id in 213 aa; rotamase complement(1890320..1891054) Burkholderia pseudomallei K96243 3096475 YP_111396.1 CDS BPSS1384 NC_006351.1 1891215 1892744 R hypothetical protein complement(1891215..1892744) Burkholderia pseudomallei K96243 3095181 YP_111397.1 CDS BPSS1385 NC_006351.1 1893842 1894828 R ATP/GTP binding protein complement(1893842..1894828) Burkholderia pseudomallei K96243 3096526 YP_111398.1 CDS BPSS1386 NC_006351.1 1895431 1899264 R Poor database matches. Almost identical to the previously sequence Burkholderia pseudomallei hypothetical protein SWALL:Q93L05 (EMBL:AF074878) (1287 aa) fasta scores: E(): 0, 98.21% id in 1287 aa; ATP/GTP binding protein complement(1895431..1899264) Burkholderia pseudomallei K96243 3097104 YP_111399.1 CDS BPSS1387 NC_006351.1 1899336 1899821 R Previously sequenced as Burkholderia pseudomallei hypothetical 17.9 kDa protein SWALL:Q93L04 (EMBL:AF074878) (161 aa) fasta scores: E(): 5e-66, 100% id in 161 aa. Similar to Sinorhizobium meliloti phage PBC5 hypothetical 17.1 kDa protein orf18 SWALL:Q8W6K9 (EMBL:AF448724) (150 aa) fasta scores: E(): 4.7e-13, 35.46% id in 141 aa; hypothetical protein complement(1899336..1899821) Burkholderia pseudomallei K96243 3095274 YP_111400.1 CDS BPSS1388 NC_006351.1 1899846 1901654 R Similar to Burkholderia pseudomallei hypothetical 61.4 kDa protein SWALL:Q93L03 (EMBL:AF074878) (602 aa) fasta scores: E(): 7.5e-177, 99.5% id in 602 aa, and to C-terminus of Pseudomonas syringae HrpK SWALL:Q9L6W3 (EMBL:AF232004) (780 aa) fasta scores: E(): 2.8e-21, 30.3% id in 660 aa, and to C-terminus of Pseudomonas syringae HrpK SWALL:Q9L6V5 (EMBL:AF232005) (767 aa) fasta scores: E(): 6.6e-21, 29.83% id in 620 aa; hypothetical protein complement(1899846..1901654) Burkholderia pseudomallei K96243 3094971 YP_111401.1 CDS BPSS1389 NC_006351.1 1901932 1903338 R hypothetical protein complement(1901932..1903338) Burkholderia pseudomallei K96243 3094972 YP_111402.1 CDS sctC NC_006351.1 1903732 1905498 R Almost identical to the previously sequenced Burkholderia pseudomallei typeIII secretion-system associated protein SctC SWALL:Q93L02 (EMBL:AF074878) (588 aa) fasta scores: E(): 7.7e-207, 99.49% id in 588 aa. Similar to Ralstonia solanacearum hypersensitivity response secretion protein HrpA precursor HrpA or HrcC or rsp0874 or rs01645 SWALL:HRPA_RALSO (SWALL:Q52498) (568 aa) fasta scores: E(): 1.3e-84, 45.58% id in 577 aa, and to Burkholderia cepacia genomovar III BcsCC SWALL:Q8VP21 (EMBL:AY028431) (681 aa) fasta scores: E(): 2.9e-39, 37.1% id in 601 aa; type III secretion system protein complement(1903732..1905498) Burkholderia pseudomallei K96243 3095732 YP_111403.1 CDS BPSS1391 NC_006351.1 1905540 1906991 R Similar to Ralstonia solanacearum regulatory protein HrpB or rsp0873 or rs01644 SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 5.6e-49, 34.35% id in 492 aa. Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 54.7 kDa protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 4.9e-195, 99.58% id in 483 aa; AraC family transcriptional regulator complement(1905540..1906991) Burkholderia pseudomallei K96243 3096424 YP_111404.1 CDS sctT NC_006351.1 1907166 1907984 R Similar to Xanthomonas campestris type III secretion associated protein Hrpb8 SWALL:Q56786 (EMBL:U33548) (276 aa) fasta scores: E(): 7.1e-46, 44.64% id in 271 aa. Identical to Burkholderia pseudomallei type III secretion-associated protein SctT SWALL:Q93L00 (EMBL:AF074878) (240 aa) fasta scores: E(): 6.7e-93, 100% id in 240 aa. Similar to Xanthomonas campestris HrpB8 protein HrcT or xcc1238 SWALL:AAM40536 (EMBL:AE012222) (276 aa) fasta scores: E(): 1.6e-46, 44.98% id in 269 aa; type III secretion-associated protein complement(1907166..1907984) Burkholderia pseudomallei K96243 3095564 YP_111405.1 CDS BPSS1393 NC_006351.1 1907981 1908487 R Previously sequenced as Burkholderia pseudomallei ORF7 SWALL:Q93KZ9 (EMBL:AF074878) (168 aa) fasta scores: E(): 3.1e-52, 100% id in 168 aa; hypothetical protein complement(1907981..1908487) Burkholderia pseudomallei K96243 3095840 YP_111406.1 CDS sctN NC_006351.1 1908508 1909857 R Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion associated protein SctN SWALL:Q93KZ8 (EMBL:AF074878) (449 aa) fasta scores: E(): 8.6e-155, 99.77% id in 449 aa. Similar to Xanthomonas axonopodis HrcN protein or xac0412 SWALL:Q8PQB6 (EMBL:AE011666) (442 aa) fasta scores: E(): 1.2e-107, 70.48% id in 437 aa, and to Xanthomonas campestris probable ATP synthase HrpB6 SWALL:HRB6_XANCV (SWALL:P80153) (442 aa) fasta scores: E(): 3.6e-107, 70.48% id in 437 aa; type III secretion system ATPase complement(1908508..1909857) Burkholderia pseudomallei K96243 3095780 YP_111407.1 CDS sctL NC_006351.1 1909854 1910723 R Previously sequenced as Burkholderia pseudomallei type III secretion-associated protein SctL SWALL:Q93KZ7 (EMBL:AF074878) (289 aa) fasta scores: E(): 2.4e-103, 100% id in 289 aa. Similar to Ralstonia solanacearum protein HrpF or rsp0869 or rs01640 SWALL:Q8XRH8 (EMBL:AL646081) (301 aa) fasta scores: E(): 1.8e-15, 31.25% id in 288 aa, and to Xanthomonas axonopodis protein HrpB5 or xac0411 SWALL:AAM35302 (EMBL:AE011666) (233 aa) fasta scores: E(): 4.9e-15, 31.17% id in 247 aa; type III secretion system protein HrpB complement(1909854..1910723) Burkholderia pseudomallei K96243 3095905 YP_111408.1 CDS BPSS1396 NC_006351.1 1910708 1911475 R Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 27.8 kDa protein SWALL:Q93KZ6 (EMBL:AF074878) (255 aa) fasta scores: E(): 7.5e-105, 99.6% id in 255 aa; hypothetical protein complement(1910708..1911475) Burkholderia pseudomallei K96243 3095841 YP_111409.1 CDS sctJ NC_006351.1 1911490 1912314 R Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion associated protein SctJ SWALL:Q93KZ5 (EMBL:AF074878) (274 aa) fasta scores: E(): 1e-101, 99.27% id in 274 aa. Similar to Xanthomonas campestris HrcJ protein or xcc1233 SWALL:AAM40531 (EMBL:AE012222) (254 aa) fasta scores: E(): 1.2e-44, 53.01% id in 249 aa, and to Ralstonia solanacearum Hrp conserved lipoprotein HrcJ transmembrane or rsp0867 or rs01638 SWALL:Q52492 (EMBL:AJ245811) (269 aa) fasta scores: E(): 3.1e-44, 52.29% id in 262 aa; type III secretion associated protein complement(1911490..1912314) Burkholderia pseudomallei K96243 3095904 YP_111410.1 CDS BPSS1398 NC_006351.1 1912352 1912738 R Previously sequenced as Burkholderia pseudomallei hypothetical 13.9 kDa protein SWALL:Q93KZ4 (EMBL:AF074878) (128 aa) fasta scores: E(): 1.4e-41, 100% id in 128 aa; hypothetical protein complement(1912352..1912738) Burkholderia pseudomallei K96243 3096618 YP_111411.1 CDS BPSS1399 NC_006351.1 1912775 1913344 R Highly similar to the previously sequenced Burkholderia pseudomallei hypothetical 19.6 kDa protein SWALL:Q93KZ3 (EMBL:AF074878) (178 aa) fasta scores: E(): 2.4e-70, 98.87% id in 178 aa. N-terminus is similar to the N-terminal region of Ralstonia solanacearum HRPK protein rsp0865 or rs01636 SWALL:Q52490 (EMBL:AJ245811) (158 aa) fasta scores: E(): 2.2e-06, 29.36% id in 126 aa; hypothetical protein complement(1912775..1913344) Burkholderia pseudomallei K96243 3094997 YP_111412.1 CDS sctU NC_006351.1 1913631 1914689 D Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctU SWALL:Q93KZ2 (EMBL:AF074878) (351 aa) fasta scores: E(): 5.4e-132, 99.14% id in 352 aa. Similar to Ralstonia solanacearum hypersensitivity response secretion protein HrcU or HrpN or rsp0864 or rs01635 SWALL:HRCU_RALSO (SWALL:P35652) (357 aa) fasta scores: E(): 2.8e-60, 50% id in 346 aa, and to Xanthomonas campestris HrcU homolog SWALL:Q9RBK8 (EMBL:AF160974) (357 aa) fasta scores: E(): 3e-57, 45.79% id in 345 aa; type III secretion system protein HrcU 1913631..1914689 Burkholderia pseudomallei K96243 3095565 YP_111413.1 CDS sctV NC_006351.1 1914705 1916822 D Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctV SWALL:Q93KZ1 (EMBL:AF074878) (705 aa) fasta scores: E(): 0, 99.71% id in 705 aa. Similar to Pseudomonas glumae HrpO SWALL:Q9F1J5 (EMBL:AB053455) (698 aa) fasta scores: E(): 7.7e-193, 77.69% id in 704 aa; type III secretion-associated protein 1914705..1916822 Burkholderia pseudomallei K96243 3095735 YP_111414.1 CDS BPSS1402 NC_006351.1 1916819 1917505 D Highly similar to the previously sequenced Burkholderia pseudomallei hypothetical 24.8 kDa protein SWALL:Q9ZGR2 (EMBL:AF074878) (227 aa) fasta scores: E(): 1.4e-73, 96.91% id in 227 aa; hypothetical protein 1916819..1917505 Burkholderia pseudomallei K96243 3094998 YP_111415.1 CDS sctQ NC_006351.1 1917874 1918806 D Similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctQ SWALL:Q9ZGR1 (EMBL:AF074878) (310 aa) fasta scores: E(): 4.2e-117, 98.06% id in 310 aa. Similar to Zea mays fdr3 SWALL:Q94KV5 (EMBL:AF262623) (355 aa) fasta scores: E(): 1.1e-16, 33.33% id in 315 aa, and to Ralstonia solanacearum protein HrpQ or HrcQ or rsp0861 or rs01632 SWALL:Q52489 (EMBL:AJ245811) (354 aa) fasta scores: E(): 1.8e-12, 29.09% id in 299 aa; type III secretion-associated protein 1917874..1918806 Burkholderia pseudomallei K96243 3097268 YP_111416.1 CDS sctR NC_006351.1 1918790 1919440 D part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 1918790..1919440 Burkholderia pseudomallei K96243 3097269 YP_111417.1 CDS sctS NC_006351.1 1919463 1919726 D Highly similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctS SWALL:Q9ZGR0 (EMBL:AF074878) (87 aa) fasta scores: E(): 3.7e-31, 98.85% id in 87 aa. Similar to Ralstonia solanacearum HrpU protein or HrcS or rsp0859 or rs01630 SWALL:Q52487 (EMBL:AJ245811) (86 aa) fasta scores: E(): 3.4e-14, 58.53% id in 82 aa, and to Xanthomonas oryzae pv. oryzicola HrcS SWALL:Q93MH8 (EMBL:AF404819) (86 aa) fasta scores: E(): 2e-13, 52.32% id in 86 aa; type III secretion-associated protein 1919463..1919726 Burkholderia pseudomallei K96243 3095656 YP_111418.1 CDS BPSS1406 NC_006351.1 1919731 1920690 D Similar to the previously sequenced Burkholderia pseudomallei hypothetical 34.4 kDa protein SWALL:Q9ZGQ9 (EMBL:AF074878) (317 aa) fasta scores: E(): 6.1e-118, 97.8% id in 319 aa; hypothetical protein 1919731..1920690 Burkholderia pseudomallei K96243 3095527 YP_111419.1 CDS sctD NC_006351.1 1920833 1921882 D Highly similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctD SWALL:Q93KZ0 (EMBL:AF074878) (349 aa) fasta scores: E(): 1.7e-119, 98.28% id in 349 aa. Similar to Xanthomonas campestris HrpD5 protein or xcc1223 SWALL:Q8PBA0 (EMBL:AE012221) (315 aa) fasta scores: E(): 1e-09, 30.09% id in 329 aa; secretion-associated protein 1920833..1921882 Burkholderia pseudomallei K96243 3095934 YP_111420.1 CDS BPSS1408 NC_006351.1 1921937 1922185 D Previously sequenced as Burkholderia pseudomallei hypothetical 8.8 kDa protein SWALL:Q93KY9 (EMBL:AF074878) (82 aa) fasta scores: E(): 7.3e-30, 100% id in 82 aa; hypothetical protein 1921937..1922185 Burkholderia pseudomallei K96243 3095113 YP_111421.1 CDS BPSS1409 NC_006351.1 1922315 1922602 D hypothetical protein 1922315..1922602 Burkholderia pseudomallei K96243 3095114 YP_111422.1 CDS BPSS1410 NC_006351.1 1922715 1923170 D Similar to Xanthomonas oryzae HpaB SWALL:Q9KW23 (EMBL:AB045311) (162 aa) fasta scores: E(): 7e-30, 52.86% id in 157 aa. Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 16.8 kDa protein SWALL:Q93KY8 (EMBL:AF074878) (151 aa) fasta scores: E(): 1.1e-61, 99.33% id in 151 aa; hypothetical protein 1922715..1923170 Burkholderia pseudomallei K96243 3095928 YP_111423.1 CDS BPSS1411 NC_006351.1 1923507 1924622 D Previously sequenced as Burkholderia pseudomallei hypothetical 23.1 kDa protein SWALL:Q93KY7 (EMBL:AF074878) (218 aa) fasta scores: E(): 8e-79, 100% id in 218 aa. Weakly similar to Serratia entomophila SepC protein SWALL:Q9F9Z0 (EMBL:AF135182) (973 aa) fasta scores: E(): 5.3e-07, 29.94% id in 334 aa, and to Yersinia pestis insecticial toxin ypo2380 SWALL:Q8ZE10 (EMBL:AJ414152) (984 aa) fasta scores: E(): 7.7e-05, 31.45% id in 302 aa; hypothetical protein 1923507..1924622 Burkholderia pseudomallei K96243 3096408 YP_111424.1 CDS BPSS1412 NC_006351.1 1925049 1925531 R Similar to Ralstonia solanacearum hypothetical protein rsc2672 or rs04533 SWALL:Q8XW03 (EMBL:AL646071) (159 aa) fasta scores: E(): 2.7e-13, 36.91% id in 149 aa, and to Rhizobium meliloti auxin-binding protein r01214 or smc01776 SWALL:Q92QU1 (EMBL:AL591786) (167 aa) fasta scores: E(): 1.7e-06, 36.36% id in 99 aa; hypothetical protein complement(1925049..1925531) Burkholderia pseudomallei K96243 3096409 YP_111425.1 CDS BPSS1413 NC_006351.1 1925626 1926240 R Similar to Bradyrhizobium japonicum Bll1358 protein SWALL:BAC46623 (EMBL:AP005939) (271 aa) fasta scores: E(): 5.4e-28, 44.33% id in 203 aa, and to Xanthomonas axonopodis hydrolase xac3428 SWALL:Q8PH32 (EMBL:AE011989) (205 aa) fasta scores: E(): 4.7e-16, 36.31% id in 201 aa; hydrolase complement(1925626..1926240) Burkholderia pseudomallei K96243 3094909 YP_111426.1 CDS BPSS1414 NC_006351.1 1926431 1927135 D Similar to Rhodobacter capsulatus pyruvate dehydrogenase complex repressor PdhR SWALL:O33960 (EMBL:U78309) (257 aa) fasta scores: E(): 1.5e-12, 32.6% id in 230 aa, and to Rhizobium meliloti GntR-family transcriptional regulator ra0130 or sma0246 SWALL:Q930R5 (EMBL:AE007207) (233 aa) fasta scores: E(): 8.2e-21, 37% id in 227 aa, and to Agrobacterium tumefaciens transcriptional regulator, GntR family atu2740 or agr_c_4967 SWALL:Q8UBW0 (EMBL:AE009221) (238 aa) fasta scores: E(): 1.7e-20, 36.74% id in 215 aa; GntR family transcriptional regulator 1926431..1927135 Burkholderia pseudomallei K96243 3096292 YP_111427.1 CDS BPSS1415 NC_006351.1 1927214 1928104 D Similar to Salmonella typhimurium 3-hydroxyisobutyrate dehydrogenase YgbJ or stm2918 SWALL:Q8ZMG4 (EMBL:AE008833) (307 aa) fasta scores: E(): 2.5e-52, 58.07% id in 291 aa, and to Pasteurella multocida hypothetical protein Pm1366 SWALL:Q9CL76 (EMBL:AE006174) (301 aa) fasta scores: E(): 9.3e-52, 55.66% id in 300 aa, and to Brucella melitensis D-beta-hydroxybutyrate dehydrogenase bmeII1090 SWALL:Q8YB11 (EMBL:AE009741) (302 aa) fasta scores: E(): 2.4e-49, 55.4% id in 296 aa; dehydrogenase/oxidoreductase 1927214..1928104 Burkholderia pseudomallei K96243 3096293 YP_111428.1 CDS BPSS1416 NC_006351.1 1928115 1929518 D Similar to Pasteurella multocida hypothetical protein Pm1365 SWALL:Q9CL77 (EMBL:AE006174) (413 aa) fasta scores: E(): 4.4e-60, 48.96% id in 388 aa, and to Brucella melitensis hypothetical protein BmeII1091 SWALL:Q8YB10 (EMBL:AE009741) (436 aa) fasta scores: E(): 6.8e-60, 45.16% id in 465 aa, and to Rhizobium meliloti hypothetical protein rb1377 or smb20670 SWALL:Q92TW7 (EMBL:AL603646) (425 aa) fasta scores: E(): 8.9e-59, 48.34% id in 453 aa; hypothetical protein 1928115..1929518 Burkholderia pseudomallei K96243 3096152 YP_111429.1 CDS BPSS1417 NC_006351.1 1929515 1930156 D Similar to Escherichia coli, and Shigella flexneri L-fuculose phosphate aldolase FucA or FucC or prd or b2800 or sf2814 SWALL:FUCA_ECOLI (SWALL:P11550) (215 aa) fasta scores: E(): 3.6e-07, 28.35% id in 201 aa, and to Rhizobium meliloti aldolase, possibly L-fuculose-phosphate aldolase rb1373 or smb20666 SWALL:Q92TX1 (EMBL:AL603646) (225 aa) fasta scores: E(): 1.7e-34, 51.2% id in 207 aa, and to Brucella melitensis L-fuculose phosphate aldolase bmeII1095 SWALL:Q8YB06 (EMBL:AE009741) (224 aa) fasta scores: E(): 2.4e-29, 44.97% id in 209 aa; aldolase 1929515..1930156 Burkholderia pseudomallei K96243 3096558 YP_111430.1 CDS BPSS1418 NC_006351.1 1930260 1931582 D Similar to Burkholderia cepacia phthalate transporter OphD SWALL:Q9RPP3 (EMBL:AF152094) (448 aa) fasta scores: E(): 3.2e-70, 42.61% id in 420 aa, and to Brucella melitensis tartrate transporter bmeii1096 SWALL:Q8YB05 (EMBL:AE009741) (451 aa) fasta scores: E(): 2e-112, 64.52% id in 420 aa, and to Ralstonia solanacearum probable permease transmembrane protein rsc2352 or rs01194 SWALL:Q8XWW8 (EMBL:AL646069) (442 aa) fasta scores: E(): 2.5e-106, 59.59% id in 443 aa; transmembrane permease transporter 1930260..1931582 Burkholderia pseudomallei K96243 3096559 YP_111431.1 CDS hyi NC_006351.1 1931664 1932440 D Similar to Escherichia coli hydroxypyruvate isomerase Hyi or Gip or b0508 SWALL:HYI_ECOLI (SWALL:P30147) (258 aa) fasta scores: E(): 3.6e-43, 43.96% id in 257 aa, and to Alcaligenes eutrophus hypothetical 28.3 kDa protein in Gbd 5'region SWALL:YGB4_ALCEU (SWALL:Q44015) (260 aa) fasta scores: E(): 4.8e-86, 79.45% id in 258 aa, and to Ralstonia solanacearum hypothetical protein rsc0020 or rs01842 SWALL:Q8Y3G0 (EMBL:AL646057) (262 aa) fasta scores: E(): 1.1e-77, 71.26% id in 254 aa; hydroxypyruvate isomerase 1931664..1932440 Burkholderia pseudomallei K96243 3094965 YP_111432.1 CDS BPSS1420 NC_006351.1 1932468 1933439 D Similar to Alcaligenes eutrophus hypothetical 34.2 kDa protein in Gbd 5'region SWALL:Q44016 (EMBL:L36817) (324 aa) fasta scores: E(): 3.4e-76, 66.87% id in 320 aa, and to Yersinia pestis hypothetical protein ypo2238 or y2079 SWALL:Q8ZED6 (EMBL:AJ414151) (333 aa) fasta scores: E(): 9.1e-63, 55.03% id in 318 aa, and to Brucella melitensis 4-hydroxybutyrate dehydrogenase bmeII1094 SWALL:Q8YB07 (EMBL:AE009741) (321 aa) fasta scores: E(): 7.6e-59, 52.18% id in 320 aa; hypothetical protein 1932468..1933439 Burkholderia pseudomallei K96243 3095138 YP_111433.1 CDS BPSS1421 NC_006351.1 1934223 1935014 D Similar to Rhizobium loti hypothetical protein Mll1937 from codon 35 SWALL:Q98JH6 (EMBL:AP002998) (228 aa) fasta scores: E(): 9.7e-45, 50.66% id in 225 aa. Possible alternative start site at codon 34; hypothetical protein 1934223..1935014 Burkholderia pseudomallei K96243 3095591 YP_111434.1 CDS BPSS1422 NC_006351.1 1935909 1936808 R Similar to Ralstonia solanacearum aspartyl/asparaginyl beta-hydroxylase transmembrane protein rsc1877 or rs03437 SWALL:Q8XY86 (EMBL:AL646067) (300 aa) fasta scores: E(): 2.4e-77, 58.38% id in 298 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4512 SWALL:Q9HVQ9 (EMBL:AE004865) (299 aa) fasta scores: E(): 4.9e-75, 60.06% id in 298 aa, and to Xanthomonas campestris aspartyl/asparaginyl beta-hydroxylase AspH or xcc0382 SWALL:AAM39701 (EMBL:AE012134) (301 aa) fasta scores: E(): 8.8e-74, 57.71% id in 298 aa; hypothetical protein complement(1935909..1936808) Burkholderia pseudomallei K96243 3095592 YP_111435.1 CDS BPSS1423 NC_006351.1 1937183 1938133 R Similar to Rhizobium meliloti glycine betaine/L-proline ABC transporter ProX SWALL:Q8RPR1 (EMBL:AF360731) (309 aa) fasta scores: E(): 7.1e-57, 52.24% id in 312 aa, and to Brucella suis glycine betaine/L-proline ABC transporter periplasmic glycine betaine-binding protein, br1579 SWALL:AAN30485 (EMBL:AE014452) (322 aa) fasta scores: E(): 6.3e-63, 55.84% id in 308 aa, and to Brucella melitensis glycine betaine/L-proline-binding protein ProX bmei0441 SWALL:Q8YIK3 (EMBL:AE009487) (326 aa) fasta scores: E(): 9.7e-63, 55.51% id in 308 aa; glycine betaine/L-proline ABC transporter substrate-binding protein complement(1937183..1938133) Burkholderia pseudomallei K96243 3096295 YP_111436.1 CDS BPSS1424 NC_006351.1 1938234 1939232 R Similar to Pseudomonas syringae arginine pathway regulatory protein ArgR SWALL:Q8VVB2 (EMBL:AF443787) (354 aa) fasta scores: E(): 4.9e-35, 40% id in 315 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.1e-97, 76.2% id in 332 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.4e-67, 56.82% id in 315 aa; AraC transcriptional regulatory protein complement(1938234..1939232) Burkholderia pseudomallei K96243 3096864 YP_111437.1 CDS BPSS1425 NC_006351.1 1939355 1940257 R Similar to Lactococcus lactis glycine-betaine binding permease BusAB or OpuabC SWALL:Q9RQ05 (EMBL:AF139575) (573 aa) fasta scores: E(): 7e-47, 50.73% id in 272 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsp0067 or rs02042 SWALL:Q8XTN9 (EMBL:AL646076) (298 aa) fasta scores: E(): 1.7e-94, 84.84% id in 297 aa, and to Brucella melitensis glycine betaine/L-proline transport system permease ProW bmeii0549 SWALL:Q8YCH9 (EMBL:AE009690) (301 aa) fasta scores: E(): 6.5e-59, 58.82% id in 289 aa; glycine-betaine binding ABC transporter permease complement(1939355..1940257) Burkholderia pseudomallei K96243 3096865 YP_111438.1 CDS BPSS1426 NC_006351.1 1940250 1941419 R Similar to Salmonella typhimurium glycine betaine/L-proline transport ATP-binding protein ProV or stm2809 SWALL:PROV_SALTY (SWALL:P17328) (400 aa) fasta scores: E(): 2.3e-57, 46.73% id in 398 aa, and to Ralstonia solanacearum glycine betaine/L-proline ATP-binding ABC transporter protein OpuA or rsp0066 or rs02041 SWALL:Q8XTP0 (EMBL:AL646076) (385 aa) fasta scores: E(): 2.3e-106, 82.26% id in 389 aa, and to Brucella melitensis glycine betaine/L-proline transport ATP-binding protein ProV bmeii0548 SWALL:Q8YCI0 (EMBL:AE009690) (398 aa) fasta scores: E(): 4.7e-63, 50.51% id in 392 aa; glycine betaine/L-proline transport ATP-binding protein complement(1940250..1941419) Burkholderia pseudomallei K96243 3095234 YP_111439.1 CDS BPSS1427 NC_006351.1 1942199 1942861 D Similar to Streptomyces avermitilis NADPH-dependent fmn reductase SWALL:Q82GT3 (EMBL:AP005036) (203 aa) fasta scores: E(): 1e-28, 50.79% id in 189 aa; hypothetical protein 1942199..1942861 Burkholderia pseudomallei K96243 3095878 YP_111440.1 CDS BPSS1428 NC_006351.1 1943447 1943662 D hypothetical protein 1943447..1943662 Burkholderia pseudomallei K96243 3095879 YP_111441.1 CDS BPSS1429 NC_006351.1 1943761 1944660 D hypothetical protein 1943761..1944660 Burkholderia pseudomallei K96243 3096411 YP_111442.1 CDS BPSS1430 NC_006351.1 1945122 1945457 D Similar to Thiobacillus ferrooxidans ArsR-like protein SWALL:Q9L9D2 (EMBL:AF173880) (118 aa) fasta scores: E(): 1.7e-11, 50.52% id in 95 aa, and to Ralstonia solanacearum arsenical resistance operon repressor transcription regulator protein ArsR or rsp1129 or rs05489 SWALL:Q8XQT9 (EMBL:AL646083) (107 aa) fasta scores: E(): 2.4e-17, 57.14% id in 105 aa, and to Caulobacter crescentus transcriptional regulator, ArsR family cc1505 SWALL:Q9A859 (EMBL:AE005825) (109 aa) fasta scores: E(): 5e-15, 51.57% id in 95 aa; transcription regulator ArsR 1945122..1945457 Burkholderia pseudomallei K96243 3095792 YP_111443.1 CDS BPSS1431 NC_006351.1 1945454 1945933 D Similar to Mycobacterium tuberculosis hypothetical protein rv2641 or mt2719 or mtcy441.11 SWALL:YQ41_MYCTU (SWALL:P71940) (152 aa) fasta scores: E(): 9.6e-12, 36.12% id in 155 aa, and to Anabaena sp. hypothetical protein Alr1104 SWALL:Q8YXV5 (EMBL:AP003584) (150 aa) fasta scores: E(): 2.6e-11, 34.21% id in 152 aa; hypothetical protein 1945454..1945933 Burkholderia pseudomallei K96243 3095793 YP_111444.1 CDS BPSS1432 NC_006351.1 1945968 1946462 D Similar to Thiobacillus ferrooxidans arsenate reductase ArsC SWALL:Q9L9D3 (EMBL:AF173880) (163 aa) fasta scores: E(): 1.1e-13, 37.83% id in 148 aa, and to Ralstonia solanacearum arsenate reductase ArsC or rsp1128 or rs05491 SWALL:Q8XQU0 (EMBL:AL646083) (164 aa) fasta scores: E(): 7.6e-52, 79.26% id in 164 aa, and to Rhodobacter capsulatus arsenate reductase SWALL:O68076 (EMBL:AF010496) (281 aa) fasta scores: E(): 5.2e-22, 45.57% id in 158 aa; arsenate reductase 1945968..1946462 Burkholderia pseudomallei K96243 3095736 YP_111445.1 CDS BPSS1433 NC_006351.1 1946525 1947595 D Similar to Sinorhizobium sp. As4 arsenic resistance ArsB SWALL:Q9RA92 (EMBL:AF178758) (351 aa) fasta scores: E(): 5.8e-24, 30.65% id in 349 aa, and to Agrobacterium tumefaciens sodium bile acid symporter family protein atu1491 or agr_c_2750 SWALL:Q8UFA7 (EMBL:AE009108) (352 aa) fasta scores: E(): 8.7e-87, 71.04% id in 335 aa, and to Pasteurella multocida hypothetical protein Pm1943 SWALL:Q9CJQ1 (EMBL:AE006231) (338 aa) fasta scores: E(): 3.6e-64, 51.66% id in 331 aa; sodium bile acid symporter family protein 1946525..1947595 Burkholderia pseudomallei K96243 3096313 YP_111446.1 CDS BPSS1434 NC_006351.1 1948688 1956592 D Similar to C-terminus of Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 1.2e-132, 37.46% id in 2565 aa, and to C-terminus of Streptococcus cristatus SrpA SWALL:Q9KX33 (EMBL:U96166) (3381 aa) fasta scores: E(): 8.9e-115, 32.07% id in 2703 aa, and to C-terminus of Streptococcus gordonii streptococcal hemagglutinin Hsa SWALL:Q9KWR3 (EMBL:AB029393) (2178 aa) fasta scores: E(): 1.5e-88, 35.24% id in 2105 aa; membrane-anchored cell surface protein 1948688..1956592 Burkholderia pseudomallei K96243 3096314 YP_111447.1 CDS BPSS1437 NC_006351.1 1956745 1957068 D lipoprotein 1956745..1957068 Burkholderia pseudomallei K96243 3095262 YP_111448.1 CDS BPSS1438 NC_006351.1 1957626 1959422 D C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc3164 or rs00434 SWALL:Q8XUM3 (EMBL:AL646074) (387 aa) fasta scores: E(): 6e-30, 34.75% id in 374 aa, and Caulobacter crescentus protein FlbA or cc1457 SWALL:FLBA_CAUCR (SWALL:P21296) (596 aa) fasta scores: E(): 8.3e-11, 28.22% id in 613 aa; hypothetical protein 1957626..1959422 Burkholderia pseudomallei K96243 3095851 YP_111449.1 CDS BPSS1439 NC_006351.1 1960277 1964869 D Similar to C-terminus of Staphylococcus epidermidis streptococcal hemagglutinin protein se2249 SWALL:AAO05891 (EMBL:AE016751) (2310 aa) fasta scores: E(): 1.8e-79, 40.67% id in 1480 aa, and to C-terminus of Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 1.1e-73, 36.81% id in 1456 aa. Possible alternative translational start site; membrane-anchored cell surface protein 1960277..1964869 Burkholderia pseudomallei K96243 3095852 YP_111450.1 CDS BPSS1442 NC_006351.1 1964863 1966020 D hypothetical protein 1964863..1966020 Burkholderia pseudomallei K96243 3095277 YP_111451.1 CDS BPSS1443 NC_006351.1 1966066 1967190 D hypothetical protein 1966066..1967190 Burkholderia pseudomallei K96243 3095411 YP_111452.1 CDS BPSS1444 NC_006351.1 1967536 1968717 R hypothetical protein complement(1967536..1968717) Burkholderia pseudomallei K96243 3095412 YP_111453.1 CDS BPSS1445 NC_006351.1 1968819 1970813 R Similar to Mycobacterium tuberculosis acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase AccA1 or BccA or rv2501c or mt2576 or mtcy07a7.07C] SWALL:BCCA_MYCTU (SWALL:P46401) (654 aa) fasta scores: E(): 1.3e-95, 47.81% id in 663 aa, and to Xanthomonas campestris biotin carboxylase AccC or xcc0244 SWALL:AAM39563 (EMBL:AE012120) (675 aa) fasta scores: E(): 6e-133, 58.04% id in 665 aa, and to Xanthomonas axonopodis biotin carboxylase AccC or xac0263 SWALL:AAM35155 (EMBL:AE011651) (675 aa) fasta scores: E(): 2e-128, 57.31% id in 663 aa; biotin carboxylase complement(1968819..1970813) Burkholderia pseudomallei K96243 3095238 YP_111454.1 CDS BPSS1446 NC_006351.1 1970974 1971759 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1970974..1971759) Burkholderia pseudomallei K96243 3096105 YP_111455.1 CDS BPSS1447 NC_006351.1 1971780 1973387 R Similar to Homo sapiens methylcrotonyl-coA carboxylase beta chain, mitochondrial precursor MccC2 or MccB SWALL:MCCB_HUMAN (SWALL:Q9HCC0) (563 aa) fasta scores: E(): 1e-140, 66.09% id in 522 aa, and to Ralstonia solanacearum propionyl-coA carboxylase rsc0269 or rs03236 SWALL:Q8Y2R6 (EMBL:AL646058) (535 aa) fasta scores: E(): 4.7e-179, 81.86% id in 535 aa, and to Agrobacterium tumefaciens 3-methylcrotonoyl-coA carboxylase beta subunit MccB or atu3478 or agr_l_2706 SWALL:Q8UA96 (EMBL:AE009278) (537 aa) fasta scores: E(): 4.4e-164, 75.37% id in 532 aa; biotin-dependent carboxyl transferase complement(1971780..1973387) Burkholderia pseudomallei K96243 3096106 YP_111456.1 CDS BPSS1448 NC_006351.1 1973410 1974591 R Similar to Solanum tuberosum isovaleryl-coA dehydrogenase 2, mitochondrial precursor Ivd2 SWALL:Q9FS87 (EMBL:AJ278988) (401 aa) fasta scores: E(): 2.1e-97, 65.54% id in 386 aa, and to Ralstonia solanacearum probable acyl-coA dehydrogenase oxidoreductase rsc0279 or rs03246 SWALL:Q8Y2Q6 (EMBL:AL646058) (393 aa) fasta scores: E(): 8e-131, 82.9% id in 392 aa, and to Xanthomonas campestris acyl-coA dehydrogenase AcdA or xcc0246 SWALL:AAM39565 (EMBL:AE012121) (387 aa) fasta scores: E(): 2.3e-112, 71.86% id in 391 aa; acyl-CoA dehydrogenase complement(1973410..1974591) Burkholderia pseudomallei K96243 3095407 YP_111457.1 CDS BPSS1449 NC_006351.1 1974799 1975563 D Similar to Bacillus subtilis hypothetical protein YsiA SWALL:P94548 (EMBL:Z75208) (194 aa) fasta scores: E(): 4.3e-10, 21.87% id in 192 aa, and to Bacillus cereus transcriptional regulator, TetR family SWALL:Q72ZL6 (EMBL:AE017278) (195 aa) fasta scores: E(): 3.4e-08, 24.06% id in 187 aa. CDS is extended at the N- and C-termini in comparison to similar proteins. Possible pseudogene; TetR family transcriptional regulator 1974799..1975563 Burkholderia pseudomallei K96243 3097213 YP_111458.1 CDS BPSS1452 NC_006351.1 1978963 1980426 D Similar to Neisseria gonorrhoeae major outer membrane protein Pan 1 precursor AniA SWALL:ANIA_NEIGO (SWALL:Q02219) (392 aa) fasta scores: E(): 7.9e-20, 31.92% id in 379 aa, and to Hyphomicrobium denitrificans nitrite reductase precursor NirK SWALL:Q8KKH4 (EMBL:AB076606) (486 aa) fasta scores: E(): 1.8e-20, 29.76% id in 467 aa. CDS is extended at the C-terminus in comparison to similar proteins; copper nitrite reductase 1978963..1980426 Burkholderia pseudomallei K96243 3095134 YP_111459.1 CDS BPSS1453 NC_006351.1 1980962 1984240 D Possible gene fusion. N-terminus is similar to Rhodococcus sp. I24 nidA dioxygenase large subunit NidA SWALL:Q9X593 (EMBL:AF121905) (468 aa) fasta scores: E(): 7.4e-07, 32.74% id in 113 aa. C-terminus is similar to Vibrio alginolyticus carboxynorspermidine decarboxylase NspC SWALL:Q56575 (EMBL:D31783) (377 aa) fasta scores: E(): 6.9e-33, 30.37% id in 372 aa; bifunctional protein GlmU 1980962..1984240 Burkholderia pseudomallei K96243 3095103 YP_111460.1 CDS BPSS1454 NC_006351.1 1984227 1985591 D C-terminal region is similar to Anabaena sp. hypothetical protein Alr0786 SWALL:Q8YYR0 (EMBL:AP003583) (344 aa) fasta scores: E(): 3.2e-29, 34.19% id in 348 aa, and Synechocystis sp. hypothetical protein Slr1287 SWALL:P74202 (EMBL:D90913) (336 aa) fasta scores: E(): 1.1e-24, 34.22% id in 336 aa. Possible alternative translational start site; hypothetical protein 1984227..1985591 Burkholderia pseudomallei K96243 3095104 YP_111461.1 CDS BPSS1455 NC_006351.1 1985593 1986384 D Weakly similar to internal regions of Homo sapiens hypothetical protein Kiaa0585 SWALL:Q9Y4E2 (EMBL:AB011157) (416 aa) fasta scores: E(): 3.4e-14, 29.88% id in 261 aa, and Mus musculus apoptotic cell clearance receptor Ptdserr PtdsR SWALL:Q9ERI5 (EMBL:AF304118) (403 aa) fasta scores: E(): 4.5e-14, 29.5% id in 261 aa; hypothetical protein 1985593..1986384 Burkholderia pseudomallei K96243 3096827 YP_111462.1 CDS BPSS1456 NC_006351.1 1986772 1987392 D hypothetical protein 1986772..1987392 Burkholderia pseudomallei K96243 3095005 YP_111463.1 CDS BPSS1457 NC_006351.1 1987533 1988546 D Similar to Caulobacter crescentus hypothetical protein Cc1198 SWALL:Q9A8Z7 (EMBL:AE005797) (331 aa) fasta scores: E(): 4.5e-83, 62.23% id in 331 aa, and to Campylobacter jejuni hypothetical protein Cj0554 SWALL:Q9PHW0 (EMBL:AL139075) (334 aa) fasta scores: E(): 2.4e-64, 48.77% id in 326 aa, and to Streptomyces coelicolor hypothetical protein sco0437 or scf51a.15C SWALL:Q9RL49 (EMBL:AL939105) (341 aa) fasta scores: E(): 1e-54, 48.94% id in 331 aa; hypothetical protein 1987533..1988546 Burkholderia pseudomallei K96243 3095006 YP_111464.1 CDS BPSS1458 NC_006351.1 1989047 1990465 R Similar to Comamonas testosteroni transporter PmdK SWALL:Q93PT0 (EMBL:AF305325) (465 aa) fasta scores: E(): 1e-16, 26.15% id in 455 aa, and to Xanthomonas campestris MFS transporter xcc1685 SWALL:AAM40979 (EMBL:AE012270) (468 aa) fasta scores: E(): 2.2e-83, 50.98% id in 459 aa, and to Xanthomonas axonopodis MFS transporter xac1705 SWALL:AAM36572 (EMBL:AE011802) (474 aa) fasta scores: E(): 4.2e-78, 49.56% id in 462 aa; major facilitator transporter complement(1989047..1990465) Burkholderia pseudomallei K96243 3097090 YP_111465.1 CDS BPSS1459 NC_006351.1 1990568 1991350 R Similar to Saccharomyces cerevisiae hypothetical 27.4 kDa protein in Hyr1 3'region yir042C SWALL:YIW2_YEAST (SWALL:P40586) (236 aa) fasta scores: E(): 8e-44, 51.94% id in 231 aa, and to Yersinia pestis hypothetical 27.4 kDa protein ypo1955 or y2355 SWALL:Q9ZC61 (EMBL:AL031866) (299 aa) fasta scores: E(): 1e-40, 46.48% id in 256 aa; acetyltransferase complement(1990568..1991350) Burkholderia pseudomallei K96243 3097091 YP_111466.1 CDS BPSS1460 NC_006351.1 1991964 1993325 R Similar to Pseudomonas sp. JR1 two-component sensor ArmS SWALL:Q9KJZ1 (EMBL:AF155506) (440 aa) fasta scores: E(): 7.1e-18, 32.31% id in 359 aa, and to Brucella melitensis two-component system sensor bmeII1015 SWALL:Q8YB85 (EMBL:AE009734) (447 aa) fasta scores: E(): 7.6e-71, 51.03% id in 437 aa, and to Agrobacterium tumefaciens two component sensor kinase atu4018 or agr_l_1672 SWALL:Q8U8S2 (EMBL:AE009332) (445 aa) fasta scores: E(): 2.3e-46, 37.69% id in 443 aa; two-component sensor kinase complement(1991964..1993325) Burkholderia pseudomallei K96243 3096383 YP_111467.1 CDS BPSS1461 NC_006351.1 1993328 1993987 R Similar to Pseudomonas sp. JR1 response regulator ArmR SWALL:Q9KJZ2 (EMBL:AF155506) (227 aa) fasta scores: E(): 6.5e-32, 45.37% id in 216 aa, and to Brucella melitensis two component response regulator bmIIi1014 SWALL:Q8YB86 (EMBL:AE009734) (225 aa) fasta scores: E(): 2.6e-52, 67.13% id in 216 aa, and to Agrobacterium tumefaciens two component response regulator atu4019 or agr_l_1670 SWALL:Q8U8S1 (EMBL:AE009332) (217 aa) fasta scores: E(): 4.5e-40, 52.99% id in 217 aa; two-component response regulator complement(1993328..1993987) Burkholderia pseudomallei K96243 3095218 YP_111468.1 CDS BPSS1462 NC_006351.1 1994219 1994575 D Similar to Brucella melitensis hypothetical cytosolic protein BmeII1013 SWALL:Q8YB87 (EMBL:AE009734) (111 aa) fasta scores: E(): 4.9e-14, 43.22% id in 118 aa, and to Brucella melitensis hypothetical cytosolic protein Bmei0390 SWALL:Q8YIQ3 (EMBL:AE009481) (87 aa) fasta scores: E(): 0.00027, 37.34% id in 83 aa; hypothetical protein 1994219..1994575 Burkholderia pseudomallei K96243 3095219 YP_111469.1 CDS BPSS1463 NC_006351.1 1995364 1995831 D Similar to Brucella melitensis hypothetical protein Bmeii1012 SWALL:Q8YB88 (EMBL:AE009733) (156 aa) fasta scores: E(): 3.9e-31, 57.41% id in 155 aa; hypothetical protein 1995364..1995831 Burkholderia pseudomallei K96243 3096267 YP_111470.1 CDS BPSS1464 NC_006351.1 1995853 1998192 D Similar to Brucella melitensis sulfite reductase bmeii1011 SWALL:Q8YB89 (EMBL:AE009733) (733 aa) fasta scores: E(): 3.7e-34, 44.75% id in 782 aa, and to Caulobacter crescentus sulfite reductase cc3063 SWALL:Q9A3Y7 (EMBL:AE005969) (504 aa) fasta scores: E(): 9.1e-17, 31.37% id in 510 aa; transmembrane NADPH flavoprotein 1995853..1998192 Burkholderia pseudomallei K96243 3095716 YP_111471.1 CDS BPSS1465 NC_006351.1 1998173 1999402 D Similar to Escherichia coli, and Escherichia coli O157:H7 thiamine biosynthesis lipoprotein ApbE precursor apbE SWALL:APBE_ECOLI (SWALL:P33944) (351 aa) fasta scores: E(): 8.5e-19, 28.42% id in 380 aa, and to Brucella melitensis thiamine biosynthesis lipoprotein ApbE precursor SWALL:Q8YB90 (EMBL:AE009733) (325 aa) fasta scores: E(): 2.2e-34, 42.64% id in 394 aa. CDS contains additional internal residues in comparison to orthologues; thiamine biosynthesis lipoprotein 1998173..1999402 Burkholderia pseudomallei K96243 3095717 YP_111472.1 CDS BPSS1466 NC_006351.1 1999417 2000928 R Similar to Streptomyces clavuligerus semialdehyde dehydrogenase Pcd SWALL:O85725 (EMBL:AF073895) (512 aa) fasta scores: E(): 2e-120, 66.05% id in 492 aa, and to Ralstonia solanacearum transmembrane aldehyde dehydrogenase oxidoreductase rsp1591 or rs02148 SWALL:Q8XPP7 (EMBL:AL646085) (504 aa) fasta scores: E(): 9.4e-134, 69.84% id in 504 aa, and to Rhizobium loti aldehyde dehydrogenase mll2867 SWALL:Q98HH4 (EMBL:AP003000) (504 aa) fasta scores: E(): 4.1e-132, 68.93% id in 499 aa; aldehyde dehydrogenase complement(1999417..2000928) Burkholderia pseudomallei K96243 3096623 YP_111473.1 CDS BPSS1467 NC_006351.1 2001096 2002322 R Similar to Streptomyces coelicolor aminotransferase sco3306 or sce68.04C SWALL:Q9WX27 (EMBL:AL939116) (404 aa) fasta scores: E(): 1.2e-64, 50.5% id in 400 aa, and to Ralstonia solanacearum aminotransferase rsc0229 or rs00661 SWALL:Q8Y2V3 (EMBL:AL646058) (402 aa) fasta scores: E(): 1e-56, 47.08% id in 395 aa, and to Pyrococcus abyssi aminotransferase pab2227 SWALL:Q9V282 (EMBL:AJ248283) (410 aa) fasta scores: E(): 3.6e-53, 39.54% id in 397 aa; aminotransferase complement(2001096..2002322) Burkholderia pseudomallei K96243 3096259 YP_111474.1 CDS BPSS1468 NC_006351.1 2002377 2003396 R C-terminal region is similar to Anabaena sp. hypothetical protein Alr2404 alr2404 SWALL:Q8YUE6 (EMBL:AP003589) (313 aa) fasta scores: E(): 1.2e-08, 26.86% id in 309 aa. Possible alternative translation start sites; hypothetical protein complement(2002377..2003396) Burkholderia pseudomallei K96243 3096260 YP_111475.1 CDS BPSS1469 NC_006351.1 2003571 2004479 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 4.1e-31, 38.77% id in 294 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1593 or rs02150 SWALL:Q8XPP5 (EMBL:AL646085) (296 aa) fasta scores: E(): 5.1e-60, 55.89% id in 297 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0448 SWALL:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 1.4e-54, 53% id in 300 aa; LysR family transcriptional regulator 2003571..2004479 Burkholderia pseudomallei K96243 3096072 YP_111476.1 CDS BPSS1469a NC_006351.1 2004540 2005028 D N-terminal region is similar to Ralstonia solanacearum hypothetical protein RSC0264 SWALL:Q8Y2S1 (EMBL:AL646058) (99 aa) fasta scores: E(): 1.6e-06, 47.72% id in 88 aa. CDS contains an alanine rich region towards the C-terminus; hypothetical protein 2004540..2005028 Burkholderia pseudomallei K96243 3095479 YP_111477.1 CDS BPSS1470 NC_006351.1 2005276 2006577 D Similar to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 9.2e-41, 37.43% id in 390 aa, and to Rhizobium meliloti oxidoreductase ordl3 or r02961 or smc03132 SWALL:Q92LR9 (EMBL:AL591792) (426 aa) fasta scores: E(): 1.7e-56, 42.99% id in 414 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2776 pa2776 SWALL:Q9I067 (EMBL:AE004705) (427 aa) fasta scores: E(): 1.6e-46, 39% id in 423 aa; FAD-binding oxidoreductase 2005276..2006577 Burkholderia pseudomallei K96243 3095480 YP_111478.1 CDS BPSS1471 NC_006351.1 2006630 2007328 D Similar to Ralstonia solanacearum transcription regulator protein rsp1395 or rs02063 SWALL:Q8XQ91 (EMBL:AL646084) (224 aa) fasta scores: E(): 2.7e-40, 53.15% id in 222 aa, and to Rhizobium meliloti hypothetical transcriptional regulator protein smb20033 rb0036 or smb20033 SWALL:Q92XC6 (EMBL:AL603642) (220 aa) fasta scores: E(): 1.1e-39, 55.02% id in 209 aa. Possible alternative translation start site after codon 8.; TetR family transcriptional regulator 2006630..2007328 Burkholderia pseudomallei K96243 3095626 YP_111479.2 CDS BPSS1472 NC_006351.1 2007941 2009203 D Similar to Shigella flexneri transposase for IS110 s0128 SWALL:Q9AFS5 (EMBL:AF348706) (398 aa) fasta scores: E(): 8.1e-116, 79.64% id in 398 aa, and to Streptomyces coelicolor insertion element IS110 hypothetical 43.6 kDa protein SWALL:YIS1_STRCO (SWALL:P19780) (405 aa) fasta scores: E(): 1.1e-79, 59.74% id in 395 aa. Note: Also similar to BPSS0338 (427 aa) fasta scores: E(): 2.5e-113, 88.732% identity in 426 aa overlap; transposase 2007941..2009203 Burkholderia pseudomallei K96243 3096612 YP_111480.1 CDS BPSS1473 NC_006351.1 2009252 2011057 R Limited similarity to Rhizobium meliloti hypothetical protein ra1102 or sma2012 SWALL:Q92XY6 (EMBL:AE007296) (638 aa) fasta scores: E(): 0.00033, 26.1% id in 544 aa; hypothetical protein complement(2009252..2011057) Burkholderia pseudomallei K96243 3096613 YP_111481.1 CDS BPSS1474 NC_006351.1 2011759 2012517 R Similar to Escherichia coli glycerol-3-phosphate regulon repressor GlpR or b3423 SWALL:GLPR_ECOLI (SWALL:P09392) (252 aa) fasta scores: E(): 2e-21, 32.14% id in 252 aa, and to Rhizobium meliloti transcriptional regulator, GntR family protein rb0973 or smb21533 SWALL:Q92UW3 (EMBL:AL603645) (261 aa) fasta scores: E(): 5.3e-33, 44.57% id in 249 aa, and to Rhizobium loti transcriptional regulator mlr5371 SWALL:Q98BY9 (EMBL:AP003006) (258 aa) fasta scores: E(): 9e-23, 35.96% id in 253 aa; DeoR family transcriptional regulator complement(2011759..2012517) Burkholderia pseudomallei K96243 3096929 YP_111482.1 CDS BPSS1475 NC_006351.1 2013143 2014453 R Similar to Bacillus subtilis hexuronate transporter ExuT SWALL:EXUT_BACSU (SWALL:O34456) (422 aa) fasta scores: E(): 1.6e-32, 47.3% id in 408 aa, and to Salmonella typhimurium transport protein stm1543 SWALL:Q8ZPG6 (EMBL:AE008767) (428 aa) fasta scores: E(): 4.4e-89, 54.73% id in 422 aa. Possible alternative translation start site after codon 5.; transmembrane sugar transporter complement(2013143..2014453) Burkholderia pseudomallei K96243 3096661 YP_111483.1 CDS BPSS1476 NC_006351.1 2014766 2016235 R Similar to Pseudomonas fluorescens mannitol 2-dehydrogenase MtlD SWALL:O08355 (EMBL:AF007800) (493 aa) fasta scores: E(): 2.3e-53, 38.74% id in 431 aa, and to Brucella melitensis D-mannonate oxidoreductase bmeII0478 SWALL:Q8YCQ0 (EMBL:AE009684) (502 aa) fasta scores: E(): 3.1e-68, 44.9% id in 461 aa, and to Rhizobium meliloti D-mannonate oxidoreductase UxuB or rb1441 or smb20749 SWALL:Q92TQ9 (EMBL:AL603647) (487 aa) fasta scores: E(): 3.9e-67, 45.16% id in 476 aa; mannitol dehydrogenase complement(2014766..2016235) Burkholderia pseudomallei K96243 3096662 YP_111484.1 CDS BPSS1477 NC_006351.1 2016410 2017135 D Similar to Bacillus stearothermophilus regulatory protein UxuR SWALL:Q9ZFL9 (EMBL:AF098273) (249 aa) fasta scores: E(): 7.3e-13, 30.55% id in 216 aa, and to Salmonella typhimurium, and Salmonella typhi regulatory protein, GntR family ydfh or stm1510 or sty1551 SWALL:Q8XFZ6 (EMBL:AE008766) (228 aa) fasta scores: E(): 1.5e-17, 31.36% id in 220 aa, and to Rhizobium meliloti GntR-family transcriptional regulator ra0032 or sma0065 SWALL:Q931B2 (EMBL:AE007198) (230 aa) fasta scores: E(): 1.8e-17, 33.93% id in 221 aa; GntR family transcriptional regulator 2016410..2017135 Burkholderia pseudomallei K96243 3097171 YP_111485.1 CDS rspA NC_006351.1 2017157 2018365 D Similar to Escherichia coli starvation sensing protein RspA or b1581 SWALL:RSPA_ECOLI (SWALL:P38104) (404 aa) fasta scores: E(): 4.3e-108, 65.84% id in 404 aa, and to Caulobacter crescentus mandelate racemase / muconate lactonizing enzyme family cc2812 SWALL:Q9A4L8 (EMBL:AE005947) (403 aa) fasta scores: E(): 3.6e-113, 70.82% id in 401 aa, and to Xanthomonas campestris starvation sensing protein rspa or xcc4104 SWALL:AAM43325 (EMBL:AE012534) (419 aa) fasta scores: E(): 5.4e-109, 69.36% id in 395 aa; mandelate racemase 2017157..2018365 Burkholderia pseudomallei K96243 3095526 YP_111486.1 CDS rspB NC_006351.1 2018414 2019445 D Similar to Escherichia coli starvation sensing protein RspB or b1580 SWALL:RSPB_ECOLI (SWALL:P38105) (339 aa) fasta scores: E(): 4.3e-69, 52.33% id in 342 aa, and to Salmonella typhimurium dehydrogenase RspB or stm1506 SWALL:Q8ZPJ0 (EMBL:AE008765) (339 aa) fasta scores: E(): 7.5e-69, 52.92% id in 342 aa, and to Bacillus subtilis zinc-containing alcohol dehydrogenase YjmD SWALL:O35045 (EMBL:AF015825) (339 aa) fasta scores: E(): 3.2e-43, 38.01% id in 342 aa; dehydrogenase 2018414..2019445 Burkholderia pseudomallei K96243 3095731 YP_111487.1 CDS BPSS1480 NC_006351.1 2020393 2020578 D hypothetical protein 2020393..2020578 Burkholderia pseudomallei K96243 3095632 YP_111488.1 CDS BPSS1481 NC_006351.1 2020691 2021569 D Similar to Pseudomonas aeruginosa hypothetical protein Pa3358 SWALL:Q9HYN8 (EMBL:AE004758) (292 aa) fasta scores: E(): 2.1e-30, 43.36% id in 279 aa, and to Rhizobium meliloti hypothetical membrane protein smb20885 rb1179 or smb20885 SWALL:Q92UF2 (EMBL:AL603646) (306 aa) fasta scores: E(): 4.8e-30, 38.94% id in 285 aa; hypothetical protein 2020691..2021569 Burkholderia pseudomallei K96243 3095004 YP_111489.1 CDS nadE NC_006351.1 2021925 2022779 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2021925..2022779 Burkholderia pseudomallei K96243 3097154 YP_111490.1 CDS BPSS1483 NC_006351.1 2023034 2024068 R No significant database matches to the full length CDS. N-terminal region is similar to Rhizobium loti transcriptional regulator mll3386 SWALL:Q98GC7 (EMBL:AP003001) (219 aa) fasta scores: E(): 1.2e-20, 50.25% id in 193 aa, and Yersinia pestis TetR-family regulatory protein ypo3840 or y0390 SWALL:Q8ZAG2 (EMBL:AJ414159) (228 aa) fasta scores: E(): 4e-15, 52.5% id in 200 aa; TetR family transcriptional regulator complement(2023034..2024068) Burkholderia pseudomallei K96243 3095007 YP_111491.1 CDS BPSS1484 NC_006351.1 2024180 2025397 D Similar to Yersinia pestis hypothetical protein ypo3839 or y0391 SWALL:Q8ZAG3 (EMBL:AJ414159) (405 aa) fasta scores: E(): 1.8e-95, 67.09% id in 392 aa, and to Rhizobium loti hypothetical protein Mll9388 SWALL:Q981G1 (EMBL:AP003016) (408 aa) fasta scores: E(): 5.3e-85, 59.43% id in 392 aa; hypothetical protein 2024180..2025397 Burkholderia pseudomallei K96243 3095008 YP_111492.1 CDS BPSS1485 NC_006351.1 2025394 2026242 D Similar to Yersinia pestis hypothetical protein ypo3838 or y0392 SWALL:Q8ZAG4 (EMBL:AJ414159) (280 aa) fasta scores: E(): 2e-84, 80.43% id in 276 aa, and to Rhizobium sp. hypothetical 30.2 kDa protein Y4oV SWALL:Y4OV_RHISN (SWALL:P55607) (285 aa) fasta scores: E(): 1.3e-71, 69.53% id in 279 aa; hypothetical protein 2025394..2026242 Burkholderia pseudomallei K96243 3096891 YP_111493.1 CDS BPSS1486 NC_006351.1 2026288 2026728 D Similar to Rhizobium loti hypothetical protein Mlr1698 SWALL:Q98K03 (EMBL:AP002998) (147 aa) fasta scores: E(): 1.4e-18, 45.11% id in 133 aa, and to Yersinia pestis hypothetical protein ypo0625 or y3553 SWALL:Q8ZI86 (EMBL:AJ414143) (148 aa) fasta scores: E(): 7.1e-13, 36.29% id in 135 aa; hypothetical protein 2026288..2026728 Burkholderia pseudomallei K96243 3096318 YP_111494.1 CDS BPSS1487 NC_006351.1 2027135 2028697 D Similar to Ralstonia solanacearum probable major anaerobically induced outer membrane transmembrane protein rsp1503 or rs03038 SWALL:Q8XPY3 (EMBL:AL646085) (510 aa) fasta scores: E(): 3.3e-93, 71.45% id in 522 aa, and to Neisseria meningitidis nitrite reductase, major outer membrane copper-containing protein AniA or nma1887 SWALL:Q9JTB8 (EMBL:AL162757) (386 aa) fasta scores: E(): 1.9e-67, 58.26% id in 357 aa, and to Neisseria meningitidis major anaerobically induced outer membrane protein nmb1623 SWALL:Q9JYE1 (EMBL:AE002512) (390 aa) fasta scores: E(): 3.1e-67, 57.7% id in 357 aa; anaerobically induced outer membrane protein 2027135..2028697 Burkholderia pseudomallei K96243 3096319 YP_111495.1 CDS BPSS1488 NC_006351.1 2028722 2029558 D Similar to Ralstonia solanacearum probable signal peptide protein rsp1502 or rs03039 SWALL:Q8XPY4 (EMBL:AL646085) (263 aa) fasta scores: E(): 2.4e-78, 74.14% id in 263 aa, and to Neisseria meningitidis hypothetical protein Nma1888 SWALL:Q9JTB7 (EMBL:AL162757) (251 aa) fasta scores: E(): 8.8e-30, 38.71% id in 248 aa. CDs is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site; hypothetical protein 2028722..2029558 Burkholderia pseudomallei K96243 3096006 YP_111496.1 CDS BPSS1489 NC_006351.1 2029555 2030169 D Similar to Ralstonia solanacearum probable signal peptide protein rsp1501 or rs03040 SWALL:Q8XPY5 (EMBL:AL646085) (194 aa) fasta scores: E(): 1.4e-39, 63.1% id in 187 aa, and to Bacillus sp MnxC mnxC SWALL:Q45436 (EMBL:U31081) (195 aa) fasta scores: E(): 6.3e-09, 33.79% id in 145 aa, and to Aquifex aeolicus hypothetical protein Aq_2194 aq_2194 SWALL:O67938 (EMBL:AE000777) (232 aa) fasta scores: E(): 1.7e-08, 27.1% id in 166 aa; hypothetical protein 2029555..2030169 Burkholderia pseudomallei K96243 3095175 YP_111497.1 CDS BPSS1490 NC_006351.1 2031208 2032233 D Similar to Ralstonia solanacearum N-acetylmuramoyl-L-alanine amidase rsc1796 or rs04196 SWALL:Q8XYG2 (EMBL:AL646066) (343 aa) fasta scores: E(): 1.2e-79, 65.31% id in 320 aa, and to Yersinia pestis probable N-acetylmuramoyl-L-alanine amidase ypo1715 or y1877 SWALL:Q8ZFI8 (EMBL:AJ414150) (283 aa) fasta scores: E(): 6.1e-40, 51.19% id in 252 aa, and to Salmonella typhi N-acetylmuramoyl-L-alanine amidase sty0927 SWALL:Q8Z834 (EMBL:AL627268) (276 aa) fasta scores: E(): 1.1e-34, 46.94% id in 262 aa; N-acetylmuramoyl-L-alanine amidase 2031208..2032233 Burkholderia pseudomallei K96243 3095176 YP_111498.1 CDS BPSS1491 NC_006351.1 2032502 2033761 D Similar to Escherichia coli hypothetical glycosyltransferase TibC SWALL:Q9S4K6 (EMBL:AF131891) (406 aa) fasta scores: E(): 2.5e-60, 45.45% id in 363 aa, and to Escherichia coli plasmid pib6 orfa DNA SWALL:Q93K96 (EMBL:AJ304444) (391 aa) fasta scores: E(): 8e-56, 42% id in 369 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative out of frame downstream translational start site, therefore CDS could be pseudogene; hypothetical protein 2032502..2033761 Burkholderia pseudomallei K96243 3096138 YP_111499.1 CDS BPSS1492 NC_006351.1 2033784 2035334 D C-terminus is similar to Ralstonia solanacearum hemagglutinin-related protein rsp1620 or rs02177 SWALL:Q8XPL8 (EMBL:AL646086) (1309 aa) fasta scores: E(): 5.5e-12, 35.51% id in 428 aa; hypothetical protein 2033784..2035334 Burkholderia pseudomallei K96243 3097017 YP_111500.1 CDS BPSS1493 NC_006351.1 2036034 2037980 R Weakly similar to Pseudomonas aeruginosa hypothetical protein Pa1656 SWALL:Q9I369 (EMBL:AE004593) (518 aa) fasta scores: E(): 8.7e-06, 25.93% id in 590 aa, and to Yersinia pestis hypothetical protein ypo1483 or y2687 SWALL:Q8ZG37 (EMBL:AJ414148) (533 aa) fasta scores: E(): 3.8e-05, 25.13% id in 378 aa; hypothetical protein complement(2036034..2037980) Burkholderia pseudomallei K96243 3097018 YP_111501.1 CDS BPSS1494 NC_006351.1 2037977 2038714 R Similar to Rhizobium sp LcrB protein SWALL:Q53167 (EMBL:M38698) (238 aa) fasta scores: E(): 9.9e-34, 43.16% id in 234 aa, and to Agrobacterium tumefaciens Tiorf152 protein SWALL:BAA87777 (EMBL:AB016260) (253 aa) fasta scores: E(): 3.5e-32, 41% id in 239 aa, and to Agrobacterium tumefaciens regulatory protein VirG or atu6178 or agr_pti_15 SWALL:VIRG_AGRT5 (SWALL:P07545) (253 aa) fasta scores: E(): 3.5e-32, 41% id in 239 aa; two-component response regulator protein complement(2037977..2038714) Burkholderia pseudomallei K96243 3097012 YP_111502.1 CDS BPSS1495 NC_006351.1 2038711 2040555 R Similar to Pseudomonas aeruginosa probable two-component sensor pa2571 SWALL:Q9I0R5 (EMBL:AE004685) (470 aa) fasta scores: E(): 4.9e-11, 26.43% id in 401 aa, and to Chlorobium tepidum sensor histidine kinase/response regulator ct1396 SWALL:AAM72624 (EMBL:AE012897) (808 aa) fasta scores: E(): 2.1e-06, 29.09% id in 409 aa, and to Anabaena sp. two-component hybrid sensor and regulator alr1968 SWALL:Q8YVK7 (EMBL:AP003587) (759 aa) fasta scores: E(): 2.3e-06, 29.8% id in 312 aa; two-component regulator sensor kinase complement(2038711..2040555) Burkholderia pseudomallei K96243 3096752 YP_111503.1 CDS BPSS1496 NC_006351.1 2040815 2041309 D Similar to Vibrio cholerae hypothetical protein Vca0107 SWALL:Q9KN58 (EMBL:AE004353) (168 aa) fasta scores: E(): 2.3e-28, 55.9% id in 161 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1657 SWALL:Q9I368 (EMBL:AE004593) (168 aa) fasta scores: E(): 3.5e-28, 51.55% id in 161 aa, and to Yersinia pestis hypothetical protein Ypo3707 SWALL:Q8ZAT3 (EMBL:AJ414158) (165 aa) fasta scores: E(): 2.6e-24, 47.59% id in 166 aa; hypothetical protein 2040815..2041309 Burkholderia pseudomallei K96243 3096753 YP_111504.1 CDS BPSS1497 NC_006351.1 2041333 2042832 D Similar to Pseudomonas aeruginosa hypothetical protein Pa1658 SWALL:Q9I367 (EMBL:AE004593) (491 aa) fasta scores: E(): 9.7e-131, 66.03% id in 474 aa, and to Vibrio cholerae hypothetical protein Vca0108 SWALL:Q9KN57 (EMBL:AE004353) (492 aa) fasta scores: E(): 3.2e-123, 61.45% id in 480 aa, and to Yersinia pestis hypothetical protein ypo3706 or y0038 SWALL:Q8ZAT4 (EMBL:AJ414158) (493 aa) fasta scores: E(): 9.9e-120, 59.67% id in 491 aa; hypothetical protein 2041333..2042832 Burkholderia pseudomallei K96243 3096333 YP_111505.1 CDS BPSS1498 NC_006351.1 2043052 2043561 D Similar to Yersinia pestis hypothetical protein ypo1470 or ypo0973 or y2700 or y3363 SWALL:Q8XGB3 (EMBL:AJ414148) (163 aa) fasta scores: E(): 0.0042, 24.84% id in 161 aa, and to Pseudomonas aeruginosa secreted protein Hcp (HcpB or pa5267) and (HcpC or pa0263) and (hc or pa1512) SWALL:Q9HI36 (EMBL:AE004939) (172 aa) fasta scores: E(): 0.013, 25.14% id in 175 aa; hypothetical protein 2043052..2043561 Burkholderia pseudomallei K96243 3095204 YP_111506.1 CDS BPSS1499 NC_006351.1 2043554 2044015 D Similar to Pseudomonas aeruginosa hypothetical protein Pa1659 SWALL:Q9I366 (EMBL:AE004593) (135 aa) fasta scores: E(): 0.00057, 29.24% id in 106 aa, and to Yersinia pestis hypothetical protein Ypo1488 SWALL:Q8ZG31 (EMBL:AJ414148) (150 aa) fasta scores: E(): 0.00084, 30.76% id in 117 aa; hypothetical protein 2043554..2044015 Burkholderia pseudomallei K96243 3095205 YP_111507.1 CDS BPSS1500 NC_006351.1 2044052 2045794 D Similar to Vibrio cholerae hypothetical protein Vca0110 SWALL:Q9KN55 (EMBL:AE004353) (589 aa) fasta scores: E(): 1.4e-37, 33.77% id in 598 aa, and to Yersinia pestis hypothetical protein ypo1485 or y2684 SWALL:Q8ZG34 (EMBL:AJ414148) (587 aa) fasta scores: E(): 2.5e-37, 33.39% id in 587 aa; hypothetical protein 2044052..2045794 Burkholderia pseudomallei K96243 3096930 YP_111508.1 CDS BPSS1501 NC_006351.1 2045782 2046804 D Similar to Pseudomonas aeruginosa hypothetical protein Pa1661 pa1661 SWALL:Q9I364 (EMBL:AE004594) (335 aa) fasta scores: E(): 9e-25, 31.56% id in 320 aa, and to Xanthomonas axonopodis hypothetical protein Xac4141 xac4141 SWALL:AAM38976 (EMBL:AE012064) (346 aa) fasta scores: E(): 3.3e-21, 31.76% id in 318 aa; hypothetical protein 2045782..2046804 Burkholderia pseudomallei K96243 3096693 YP_111509.1 CDS BPSS1502 NC_006351.1 2046791 2049829 D Similar to Yersinia enterocolitica clp protease-associated protein ClpB SWALL:Q9F746 (EMBL:AF285784) (890 aa) fasta scores: E(): 7.8e-55, 41.06% id in 962 aa, and to Ralstonia solanacearum ClpA/B-type chaperone protein rsp0749 or rs01959 SWALL:Q8XRT2 (EMBL:AL646080) (905 aa) fasta scores: E(): 4.1e-66, 47.08% id in 962 aa; Clp-type ATPase chaperone protein 2046791..2049829 Burkholderia pseudomallei K96243 3096694 YP_111510.1 CDS BPSS1503 NC_006351.1 2049856 2052879 D Similar over its N-terminal half to Pseudomonas aeruginosa hypothetical protein Pa5266 SWALL:Q9HTT3 (EMBL:AE004939) (691 aa) fasta scores: E(): 3.8e-32, 30.61% id in 503 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 1.5e-31, 26.39% id in 629 aa; hypothetical protein 2049856..2052879 Burkholderia pseudomallei K96243 3095009 YP_111511.1 CDS BPSS1504 NC_006351.1 2052905 2055547 D Similar over its C-terminal region to Chlorobium tepidum pentapeptide repeat family protein ct1045 SWALL:AAM72278 (EMBL:AE012867) (549 aa) fasta scores: E(): 1.5e-08, 32.65% id in 346 aa, and to Caulobacter crescentus pentapeptide repeat family protein cc0587 SWALL:Q9AAL0 (EMBL:AE005733) (371 aa) fasta scores: E(): 2.2e-08, 32.08% id in 321 aa; hypothetical protein 2052905..2055547 Burkholderia pseudomallei K96243 3095587 YP_111512.1 CDS BPSS1505 NC_006351.1 2055565 2056629 D N-terminal region is weakly similar to Synechocystis sp. hypothetical protein SLR1819 SWALL:YI19_SYNY3 (SWALL:P73709) (331 aa) fasta scores: E(): 1.1e-15, 28.8% id in 309 aa; hypothetical protein 2055565..2056629 Burkholderia pseudomallei K96243 3095588 YP_111513.1 CDS BPSS1506 NC_006351.1 2056626 2057378 D Weakly similar to Rhizobium loti hypothetical protein Mlr1970 SWALL:Q98JF2 (EMBL:AP002998) (211 aa) fasta scores: E(): 5.6, 29.57% id in 186 aa; hypothetical protein 2056626..2057378 Burkholderia pseudomallei K96243 3094883 YP_111514.1 CDS BPSS1507 NC_006351.1 2057407 2057799 D Weakly similar to Yersinia pestis hypothetical protein ypo0511a or y3662 SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 0.57, 28.84% id in 104 aa; hypothetical protein 2057407..2057799 Burkholderia pseudomallei K96243 3096369 YP_111515.1 CDS BPSS1508 NC_006351.1 2057929 2058606 D Weakly similar to Ralstonia solanacearum transmembrane protein rsp0741 or rs01967 SWALL:Q8XRU0 (EMBL:AL646080) (193 aa) fasta scores: E(): 1.8, 25.52% id in 192 aa; hypothetical protein 2057929..2058606 Burkholderia pseudomallei K96243 3096370 YP_111516.1 CDS BPSS1509 NC_006351.1 2058639 2060036 D Weakly similar to Salmonella typhi hypothetical protein Sty0304 SWALL:Q8Z966 (EMBL:AL627266) (447 aa) fasta scores: E(): 9.9e-06, 26.31% id in 475 aa; hypothetical protein 2058639..2060036 Burkholderia pseudomallei K96243 3095047 YP_111517.1 CDS BPSS1510 NC_006351.1 2060051 2060698 D Similar over its N-terminal region to Ralstonia solanacearum probable transmembrane protein rsp0739 or rs01969 SWALL:Q8XRU2 (EMBL:AL646080) (263 aa) fasta scores: E(): 1.3e-06, 34.83% id in 155 aa, and to Yersinia pestis membrane protein ypo1468 or ypo0975 or y2703 or y3366 SWALL:Q8XF18 (EMBL:AJ414148) (228 aa) fasta scores: E(): 0.047, 28.94% id in 190 aa; hypothetical protein 2060051..2060698 Burkholderia pseudomallei K96243 3096207 YP_111518.1 CDS BPSS1511 NC_006351.1 2060710 2064669 D Similar to Ralstonia solanacearum probable transmembrane protein rsp0763 or rs01945 SWALL:Q8XRR8 (EMBL:AL646080) (1313 aa) fasta scores: E(): 4.4e-17, 25.47% id in 1162 aa, and to Rhizobium leguminosarum ImpL SWALL:Q93EC2 (EMBL:AF361470) (1158 aa) fasta scores: E(): 3.1e-11, 24.82% id in 1003 aa; hypothetical protein 2060710..2064669 Burkholderia pseudomallei K96243 3096208 YP_111519.1 CDS BPSS1512 NC_006351.1 2065185 2066609 D hypothetical protein 2065185..2066609 Burkholderia pseudomallei K96243 3096758 YP_111520.1 CDS BPSS1513 NC_006351.1 2066773 2067066 D No significant database matches. Doubtful CDS.; hypothetical protein 2066773..2067066 Burkholderia pseudomallei K96243 3096713 YP_111521.1 CDS folE NC_006351.1 2067071 2067703 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2067071..2067703 Burkholderia pseudomallei K96243 3095368 YP_111522.1 CDS BPSS1516 NC_006351.1 2068764 2070173 R hypothetical protein complement(2068764..2070173) Burkholderia pseudomallei K96243 3096078 YP_111523.1 CDS BPSS1517 NC_006351.1 2070325 2070768 R hypothetical protein complement(2070325..2070768) Burkholderia pseudomallei K96243 3095899 YP_111524.1 CDS BPSS1518 NC_006351.1 2070853 2071140 R Similar to N-terminal region of Xanthomonas oryzae transposase SWALL:Q93LQ4 (EMBL:AY035401) (344 aa) fasta scores: E(): 1.5e-07, 50% id in 66 aa; transposase complement(2070853..2071140) Burkholderia pseudomallei K96243 3095900 YP_111525.1 CDS BPSS1519 NC_006351.1 2071442 2072041 D Similar to Burkholderia cepacia transposase for insertion sequence element IS402 SWALL:T402_BURCE (SWALL:P24536) (211 aa) fasta scores: E(): 1.4e-21, 55.63% id in 133 aa, and to Pseudomonas glumae transposase SWALL:Q9KVZ9 (EMBL:AB046460) (265 aa) fasta scores: E(): 7.9e-20, 52.71% id in 129 aa; transposase 2071442..2072041 Burkholderia pseudomallei K96243 3095264 YP_111526.1 CDS BPSS1520 NC_006351.1 2072125 2073186 R Weakly similar to Streptomyces coelicolor regulatory protein sco5017 or sck15.19 SWALL:Q9KY85 (EMBL:AL939122) (365 aa) fasta scores: E(): 4e-11, 28.89% id in 353 aa, and Pseudomonas aeruginosa probable transcriptional regulator pa4094 SWALL:Q9HWT4 (EMBL:AE004825) (319 aa) fasta scores: E(): 2e-09, 26.93% id in 323 aa; AraC family transcriptional regulator complement(2072125..2073186) Burkholderia pseudomallei K96243 3095464 YP_111527.1 CDS BPSS1521 NC_006351.1 2073665 2074108 R Weakly similar to Myxococcus xanthus sigma-54 dependent transcriptional activator 221_mxA SWALL:Q50874 (EMBL:U49156) (140 aa) fasta scores: E(): 3.3, 27.88% id in 104 aa; hypothetical protein complement(2073665..2074108) Burkholderia pseudomallei K96243 3095465 YP_111528.1 CDS BPSS1522 NC_006351.1 2074346 2075017 R Similar to Pseudomonas viridiflava response regulator GacA or RepB SWALL:GACA_PSEVI (SWALL:P95582) (214 aa) fasta scores: E(): 3.6e-17, 35.21% id in 213 aa, and to Yersinia pestis two-component response regulator ypo0255 or y0512 SWALL:Q8ZJ69 (EMBL:AJ414141) (210 aa) fasta scores: E(): 9e-22, 40.58% id in 207 aa; two-component response regulator complement(2074346..2075017) Burkholderia pseudomallei K96243 3096722 YP_111529.1 CDS bicP NC_006351.1 2075253 2075708 R Similar to Salmonella typhimurium SicP SWALL:O85300 (EMBL:AF060857) (116 aa) fasta scores: E(): 7.2e-06, 25.89% id in 112 aa, and to Escherichia coli O111:H- Tir chaperone CesT SWALL:CEST_ECO11 (SWALL:O30999) (156 aa) fasta scores: E(): 0.38, 26.11% id in 134 aa; chaperone complement(2075253..2075708) Burkholderia pseudomallei K96243 3096082 YP_111530.1 CDS bopA NC_006351.1 2075849 2077387 R Similar to Shigella flexneri intercellular spread protein icsb or cp0132 SWALL:ICSB_SHIFL (SWALL:P33546) (494 aa) fasta scores: E(): 1.6e-32, 31.7% id in 388 aa; intercellular spread protein complement(2075849..2077387) Burkholderia pseudomallei K96243 3096275 YP_111531.1 CDS bopE NC_006351.1 2078020 2078805 D Similar to Salmonella enterica subsp. VII G-nucleotide exchange factor SopE SWALL:Q8VSR1 (EMBL:AF378113) (240 aa) fasta scores: E(): 8.6e-08, 28.77% id in 212 aa, and to Salmonella gallinarum G-nucleotide exchange factor SopE SWALL:Q8VSQ6 (EMBL:AF380340) (240 aa) fasta scores: E(): 1.5e-07, 24.56% id in 228 aa; G-nucleotide exchange factor 2078020..2078805 Burkholderia pseudomallei K96243 3096393 YP_111532.1 CDS bapC NC_006351.1 2079259 2079822 R Similar to Salmonella typhi invasion protein IagB or sty3000 SWALL:IAGB_SALTI (SWALL:P43018) (160 aa) fasta scores: E(): 2e-11, 42.27% id in 123 aa, and to Burkholderia pseudomallei hypothetical 18.2 kDa protein SWALL:Q9ZF87 (EMBL:AF110185) (161 aa) fasta scores: E(): 5.2e-21, 47.68% id in 151 aa; invasion protein complement(2079259..2079822) Burkholderia pseudomallei K96243 3097079 YP_111533.1 CDS bapB NC_006351.1 2079819 2080100 R Similar to Saccharopolyspora erythraea acyl carrier protein AcpP SWALL:ACP_SACER (SWALL:P11830) (95 aa) fasta scores: E(): 0.0043, 36.84% id in 76 aa, and to Thermotoga maritima acyl carrier protein AcpP or tm0662 SWALL:Q9WZD0 (EMBL:AE001739) (81 aa) fasta scores: E(): 9.7e-05, 31.88% id in 69 aa; acyl carrier protein complement(2079819..2080100) Burkholderia pseudomallei K96243 3097128 YP_111534.1 CDS BPSS1528 NC_006351.1 2080097 2082739 R hypothetical protein complement(2080097..2082739) Burkholderia pseudomallei K96243 3096284 YP_111535.1 CDS bipD NC_006351.1 2082841 2083773 R Similar over the C-terminal region to Shigella flexneri 36 kDa membrane antigen IpaD or cp0126 SWALL:AAK18444 (EMBL:J04117) (332 aa) fasta scores: E(): 2e-09, 36.81% id in 182 aa, and to Shigella dysenteriae 37 kDa membrane antigen IpaD SWALL:IPAD_SHIDY (SWALL:Q03947) (332 aa) fasta scores: E(): 8.7e-09, 36.36% id in 187 aa; membrane antigen complement(2082841..2083773) Burkholderia pseudomallei K96243 3096115 YP_111536.1 CDS bprA NC_006351.1 2083835 2084125 R Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 3.7e-14, 58.33% id in 96 aa, and to Citrobacter rodentium lee-encoded regulator SWALL:Q93FM7 (EMBL:AF311901) (129 aa) fasta scores: E(): 0.0036, 26% id in 100 aa; HNS-like regulatory protein complement(2083835..2084125) Burkholderia pseudomallei K96243 3096413 YP_111537.1 CDS bipC NC_006351.1 2084259 2085518 R Weakly similar to Bordetella bronchiseptica outer protein D BopD SWALL:Q9REZ6 (EMBL:AF207788) (313 aa) fasta scores: E(): 1.4, 25.7% id in 284 aa, and to Salmonella typhi SipC protein or sty3007 SWALL:Q56135 (EMBL:X82670) (409 aa) fasta scores: E(): 0.0039, 24.21% id in 285 aa; cell invasion protein complement(2084259..2085518) Burkholderia pseudomallei K96243 3096209 YP_111538.1 CDS bipB NC_006351.1 2085560 2087422 R Similar to Shigella flexneri 62 kDa membrane antigen IpaB or cp0128 SWALL:CAC05803 (EMBL:J04117) (580 aa) fasta scores: E(): 2.1e-29, 29.81% id in 597 aa, and to Salmonella typhimurium, and Salmonella dublin SipB or stm2885 SWALL:Q56019 (EMBL:U25631) (593 aa) fasta scores: E(): 5.8e-41, 35.54% id in 543 aa; cell invasion protein complement(2085560..2087422) Burkholderia pseudomallei K96243 3096083 YP_111539.1 CDS bicA NC_006351.1 2087441 2087956 R Similar to Salmonella typhimurium, Salmonella typhi, and Salmonella dublin surface presentation of antigens protein SpaT or SicA or stm2886 or sty3009 SWALL:SPAT_SALTY (SWALL:P40703) (165 aa) fasta scores: E(): 4.2e-37, 61.9% id in 147 aa, and to Shigella flexneri, and Shigella dysenteriae IppI or IpgC or cp0129 SWALL:IPPI_SHIFL (SWALL:P18008) (155 aa) fasta scores: E(): 2.4e-33, 50.32% id in 153 aa; surface presentation of antigens protein complement(2087441..2087956) Burkholderia pseudomallei K96243 3096042 YP_111540.1 CDS bsaZ NC_006351.1 2088082 2089317 R Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins; surface presentation of antigens protein SpaS complement(2088082..2089317) Burkholderia pseudomallei K96243 3096627 YP_111541.1 CDS bsaY NC_006351.1 2089321 2090076 R Similar to Salmonella typhimurium surface presentation of antigens protein SpaR or stm2888 SWALL:SPAR_SALTY (SWALL:P40701) (263 aa) fasta scores: E(): 2.9e-32, 43.61% id in 227 aa, and to Yersinia enterocolitica YsaT SWALL:Q9KKH0 (EMBL:AF005744) (266 aa) fasta scores: E(): 3.3e-36, 46% id in 250 aa; surface presentation of antigens protein complement(2089321..2090076) Burkholderia pseudomallei K96243 3096690 YP_111542.1 CDS bsaX NC_006351.1 2090110 2090364 R Similar to Salmonella typhimurium, Salmonella typhi, Salmonella dublin, Salmonella enteritidis, Salmonella gallinarum, Salmonella senftenberg, and Salmonella typhisuis surface presentation of antigens protein SpaQ or stm2889 or sty3012 SWALL:SPAQ_SALTY (SWALL:P40704) (86 aa) fasta scores: E(): 3.7e-15, 54.21% id in 83 aa, and to Yersinia enterocolitica YsaS SWALL:Q93NK6 (EMBL:AF369954) (89 aa) fasta scores: E(): 7.6e-18, 65.06% id in 83 aa; surface presentation of antigens protein complement(2090110..2090364) Burkholderia pseudomallei K96243 3096689 YP_111543.1 CDS spaP NC_006351.1 2090401 2091081 R part of a type III secretory system probably involved in invasion into eukaryotic cells; surface presentation of antigens protein SpaP complement(2090401..2091081) Burkholderia pseudomallei K96243 3096471 YP_111544.1 CDS bsaV NC_006351.1 2091071 2092042 R Similar to Salmonella typhimurium SpaO SWALL:Q57524 (EMBL:U29358) (303 aa) fasta scores: E(): 0.045, 28.34% id in 314 aa; surface presentation of antigens protein complement(2091071..2092042) Burkholderia pseudomallei K96243 3096529 YP_111545.1 CDS BPSS1539 NC_006351.1 2092039 2093316 R No significant database matches to the full length protein; hypothetical protein complement(2092039..2093316) Burkholderia pseudomallei K96243 3096285 YP_111546.1 CDS bsaT NC_006351.1 2093294 2093758 R Weakly similar to Salmonella enterica SpaM SWALL:Q54062 (EMBL:U43314) (147 aa) fasta scores: E(): 3.7, 24.8% id in 125 aa; surface presentation of antigens protein complement(2093294..2093758) Burkholderia pseudomallei K96243 3096528 YP_111547.1 CDS bsaS NC_006351.1 2093755 2095062 R Invasion protein InvC; necessary for efficient entry of S.typhimurium into cultured epithelial cells. Probable catalytic subunit of a protein translocase; ATP synthase SpaL complement(2093755..2095062) Burkholderia pseudomallei K96243 3096673 YP_111548.1 CDS bsaR NC_006351.1 2095059 2095466 R Similar to Salmonella typhimurium, and Salmonella typhi surface presentation of antigens protein SpaK or InvB or stm2895 or sty3018 SWALL:SPAK_SALTY (SWALL:P39443) (135 aa) fasta scores: E(): 4e-06, 27.61% id in 134 aa, and to Shigella sonnei surface presentation of antigens protein spak spak or spa15 SWALL:SPAK_SHISO (SWALL:Q55296) (133 aa) fasta scores: E(): 1.9e-05, 26.51% id in 132 aa; surface presentation of antigens protein complement(2095059..2095466) Burkholderia pseudomallei K96243 3096685 YP_111549.1 CDS bsaQ NC_006351.1 2095478 2097550 R Similar to Salmonella typhimurium, and Salmonella typhi invasion protein InvA or stm2896 or sty3019 SWALL:INVA_SALTY (SWALL:P35657) (685 aa) fasta scores: E(): 7.7e-135, 56.05% id in 694 aa, and to Shigella flexneri, and Shigella sonnei MxiA protein or VirH or cp0147 SWALL:MXIA_SHIFL (SWALL:P35533) (686 aa) fasta scores: E(): 5.3e-133, 55.57% id in 691 aa; Type III secretion system protein complement(2095478..2097550) Burkholderia pseudomallei K96243 3096684 YP_111550.1 CDS bsaP NC_006351.1 2097586 2098692 R Similar to Salmonella typhimurium invasion protein InvE or stm2897 SWALL:INVE_SALTY (SWALL:P35671) (372 aa) fasta scores: E(): 3.8e-24, 33.81% id in 346 aa; Type III secretion system protein complement(2097586..2098692) Burkholderia pseudomallei K96243 3096728 YP_111551.1 CDS bsaO NC_006351.1 2098689 2100551 R Similar to Salmonella typhimurium InvG protein precursor InvG or stm2898 SWALL:INVG_SALTY (SWALL:P35672) (562 aa) fasta scores: E(): 1.8e-22, 44.5% id in 519 aa, and to Escherichia coli O157:H7 type III secretion apparatus protein z4197 or ecs3733 SWALL:Q8X6D6 (EMBL:AE005515) (567 aa) fasta scores: E(): 4e-36, 40.81% id in 517 aa; Type III secretion system protein complement(2098689..2100551) Burkholderia pseudomallei K96243 3096571 YP_111552.1 CDS bsaN NC_006351.1 2100565 2101206 R Similar to Salmonella typhimurium, and Salmonella typhi invasion protein InvF or stm2899 or sty3022 SWALL:INVF_SALTY (SWALL:P39437) (216 aa) fasta scores: E(): 3.5e-18, 36.01% id in 211 aa, and to Escherichia coli O157:H7 regulatory protein for type III secretion apparatus z4198 or ecs3734 SWALL:Q8X6D3 (EMBL:AE005515) (249 aa) fasta scores: E(): 4.4e-15, 36.84% id in 190 aa; AraC family transcriptional regulator complement(2100565..2101206) Burkholderia pseudomallei K96243 3096570 YP_111553.1 CDS BPSS1547 NC_006351.1 2101717 2103003 D Similar to Salmonella typhimurium PrgH protein or stm2874 SWALL:PRGH_SALTY (SWALL:P41783) (392 aa) fasta scores: E(): 9.1e-12, 23.74% id in 417 aa, and to Salmonella typhi pathogenicity 1 island effector protein PrgH or sty2995 SWALL:Q8Z499 (EMBL:AL627276) (392 aa) fasta scores: E(): 7e-12, 24.46% id in 417 aa; type III secretion system protein 2101717..2103003 Burkholderia pseudomallei K96243 3096220 YP_111554.1 CDS BPSS1548 NC_006351.1 2103000 2103269 D Similar to Salmonella typhimurium PrgI protein or stm2873 SWALL:PRGI_SALTY (SWALL:P41784) (80 aa) fasta scores: E(): 4.2e-12, 55.26% id in 76 aa, and to Shigella flexneri, and Shigella sonnei MxiH protein or cp0137 SWALL:MXIH_SHIFL (SWALL:Q06079) (83 aa) fasta scores: E(): 3.1e-10, 49.35% id in 77 aa; Type III secretion system protein 2103000..2103269 Burkholderia pseudomallei K96243 3095549 YP_111555.1 CDS BPSS1549 NC_006351.1 2103329 2103631 D Similar to Shigella flexneri, and Shigella sonnei MxiI protein or cp0138 SWALL:MXII_SHIFL (SWALL:Q06080) (97 aa) fasta scores: E(): 0.00022, 37.37% id in 99 aa, and to Salmonella typhimurium PrgJ protein or stm2872 SWALL:PRGJ_SALTY (SWALL:P41785) (101 aa) fasta scores: E(): 0.00075, 37.83% id in 74 aa; Type III secretion system protein 2103329..2103631 Burkholderia pseudomallei K96243 3095550 YP_111556.1 CDS BPSS1550 NC_006351.1 2103636 2104583 D Similar to Salmonella typhimurium lipoprotein PrgK precursor or stm2871 SWALL:PRGK_SALTY (SWALL:P41786) (252 aa) fasta scores: E(): 1.2e-25, 42.43% id in 238 aa, and to Shigella flexneri lipoprotein MxiJ precursor or cp0139 SWALL:MXIJ_SHIFL (SWALL:Q06081) (241 aa) fasta scores: E(): 1.1e-23, 47.89% id in 190 aa; Type III secretion system protein 2103636..2104583 Burkholderia pseudomallei K96243 3096770 YP_111557.1 CDS BPSS1551 NC_006351.1 2104580 2105167 D Similar to Salmonella typhimurium oxygen-regulated invasion protein OrgA or stm2870 SWALL:ORGA_SALTY (SWALL:P58653) (199 aa) fasta scores: E(): 4.2e-08, 31.87% id in 160 aa; Type III secretion system protein 2104580..2105167 Burkholderia pseudomallei K96243 3096404 YP_111558.1 CDS BPSS1552 NC_006351.1 2105136 2105918 D Similar to Salmonella typhimurium oxygen-regulated invasion protein OrgB or stm2869 SWALL:ORGB_SALTY (SWALL:P58654) (226 aa) fasta scores: E(): 2.9e-07, 27.4% id in 208 aa; Type III secretion system protein 2105136..2105918 Burkholderia pseudomallei K96243 3096405 YP_111559.1 CDS BPSS1553 NC_006351.1 2106912 2107883 D No significant similarity over the entire length of the protein. Similar to Yersinia enterocolitica orf1 SWALL:Q9KKJ0 (EMBL:AF005744) (161 aa) fasta scores: E(): 0.0001, 39.09% id in 110 aa, and to Salmonella typhi possible transmembrane regulator sty0377 SWALL:Q8Z922 (EMBL:AL627266) (247 aa) fasta scores: E(): 0.03, 30.2% id in 149 aa; hypothetical protein 2106912..2107883 Burkholderia pseudomallei K96243 3095781 YP_111560.1 CDS BPSS1554 NC_006351.1 2107895 2108335 D hypothetical protein 2107895..2108335 Burkholderia pseudomallei K96243 3095650 YP_111561.1 CDS BPSS1555 NC_006351.1 2109379 2111076 D Similar to Streptomyces coelicolor metalloproteinase sco2474 or sc7a8.13 SWALL:Q9L2E5 (EMBL:AL939112) (547 aa) fasta scores: E(): 3.1e-52, 41.6% id in 572 aa, and to Xanthomonas axonopodis metalloproteinase xac0465 SWALL:AAM35356 (EMBL:AE011673) (540 aa) fasta scores: E(): 1.1e-61, 45.75% id in 518 aa; peptidase 2109379..2111076 Burkholderia pseudomallei K96243 3095651 YP_111562.1 CDS BPSS1556 NC_006351.1 2112198 2112686 R Similar to Ralstonia oxalatica transcription regulator SWALL:CAD61124 (EMBL:AJ536756) (164 aa) fasta scores: E(): 1.4e-07, 34.17% id in 158 aa, and to Bacillus subtilis YetL protein yetL SWALL:O31541 (EMBL:Z99107) (167 aa) fasta scores: E(): 2e-07, 30.9% id in 165 aa; MarR family transcriptional regulator complement(2112198..2112686) Burkholderia pseudomallei K96243 3095003 YP_111563.1 CDS BPSS1557 NC_006351.1 2113012 2113470 D Similar to Caulobacter crescentus lactoylglutathione lyase, cc1933 SWALL:Q9A6Z3 (EMBL:AE005867) (139 aa) fasta scores: E(): 0.00013, 31.61% id in 136 aa, and to Arabidopsis thaliana f9l1.33 protein f9l1.33 or at1g15380 SWALL:Q9XI31 (EMBL:AC007591) (174 aa) fasta scores: E(): 3.5e-05, 28.35% id in 134 aa; glyoxalase 2113012..2113470 Burkholderia pseudomallei K96243 3096288 YP_111564.1 CDS kgtP NC_006351.1 2114037 2115356 D Similar to Escherichia coli alpha-ketoglutarate permease KgtP or WitA or b2587 SWALL:KGTP_ECOLI (SWALL:P17448) (432 aa) fasta scores: E(): 2.6e-80, 52.82% id in 407 aa, and to Ralstonia solanacearum alpha-ketoglutarate permease transmembrane protein KgtP2 or rsp0007 or rs01979 SWALL:Q8XTU7 (EMBL:AL646076) (447 aa) fasta scores: E(): 3.7e-108, 66.82% id in 416 aa; alpha-ketoglutarate permease 2114037..2115356 Burkholderia pseudomallei K96243 3094946 YP_111565.1 CDS BPSS1559 NC_006351.1 2115742 2116629 R Similar to Yersinia pestis similar to hypothetical transcriptional regulator ypo1934 or y2377 SWALL:Q9ZC44 (EMBL:AL031866) (320 aa) fasta scores: E(): 5.2e-58, 55.67% id in 291 aa; LysR family transcriptional regulator complement(2115742..2116629) Burkholderia pseudomallei K96243 3096289 YP_111566.1 CDS mdlB NC_006351.1 2116730 2117953 D Similar to Pseudomonas putida L(+)-mandelate dehydrogenase MdlB SWALL:MDLB_PSEPU (SWALL:P20932) (393 aa) fasta scores: E(): 5.7e-46, 38.36% id in 378 aa, and to Brucella melitensis L-lactate dehydrogenase bmeii0377 SWALL:Q8YD00 (EMBL:AE009675) (382 aa) fasta scores: E(): 4.5e-42, 35.67% id in 370 aa. CDS is extended at the N-terminus in comparison to orthologues.; L(+)-mandelate dehydrogenase 2116730..2117953 Burkholderia pseudomallei K96243 3095127 YP_111567.1 CDS BPSS1561 NC_006351.1 2118077 2119741 R Similar to Ralstonia solanacearum probable carboxypeptidase rsc1003 or rs04289 SWALL:Q8Y0P0 (EMBL:AL646062) (543 aa) fasta scores: E(): 2.7e-111, 56.51% id in 545 aa, and to Deinococcus radiodurans carboxypeptidase-related protein dr0964 SWALL:Q9RVQ8 (EMBL:AE001948) (500 aa) fasta scores: E(): 2.7e-33, 34.62% id in 517 aa; carboxypeptidase complement(2118077..2119741) Burkholderia pseudomallei K96243 3096104 YP_111568.1 CDS BPSS1562 NC_006351.1 2120444 2122033 R Similar to Bacillus subtilis kumamolysin kumA SWALL:Q8RR56 (EMBL:AB070740) (572 aa) fasta scores: E(): 6e-86, 50.64% id in 541 aa, and to Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 2.2e-29, 31.64% id in 534 aa; kumamolisin complement(2120444..2122033) Burkholderia pseudomallei K96243 3097003 YP_111569.1 CDS BPSS1563 NC_006351.1 2122464 2123090 R Similar to Pseudomonas aeruginosa hypothetical protein Pa4507 pa4507 SWALL:Q9HVR4 (EMBL:AE004864) (210 aa) fasta scores: E(): 1.7e-31, 47.76% id in 201 aa, and to Ralstonia solanacearum probable transport transmembrane protein rsc0418 or rs03386 SWALL:Q8Y2B8 (EMBL:AL646059) (206 aa) fasta scores: E(): 5.4e-18, 35.78% id in 204 aa; LysE family translocator complement(2122464..2123090) Burkholderia pseudomallei K96243 3097004 YP_111570.1 CDS BPSS1564 NC_006351.1 2123224 2123688 D Similar to Pseudomonas putida lrp-family transcriptional regulators MdeR SWALL:O33467 (EMBL:D89015) (159 aa) fasta scores: E(): 2.2e-26, 49.33% id in 150 aa, and to Pseudomonas putida transcriptional regulator, AsnC-family pp1307 SWALL:AAN66931 (EMBL:AE016778) (159 aa) fasta scores: E(): 1.4e-25, 48.66% id in 150 aa; transcription regulator AsnC 2123224..2123688 Burkholderia pseudomallei K96243 3095576 YP_111571.1 CDS BPSS1565 NC_006351.1 2124036 2124440 D Similar to Ralstonia solanacearum hypothetical protein rsp0181 or rs04693 SWALL:Q8XTD2 (EMBL:AL646077) (134 aa) fasta scores: E(): 6.4e-29, 57.81% id in 128 aa, and to Rhizobium meliloti hypothetical protein rb1133 or smb21007 SWALL:Q92UJ5 (EMBL:AL603646) (139 aa) fasta scores: E(): 5.6e-14, 37.58% id in 141 aa; hypothetical protein 2124036..2124440 Burkholderia pseudomallei K96243 3094891 YP_111572.1 CDS BPSS1566 NC_006351.1 2124793 2126379 D Similar to Escherichia coli low-affinity inorganic phosphate transporter 1 PitA or Pit or b3493 or c4291 or z4893 or ecs4365 SWALL:PITA_ECOLI (SWALL:P37308) (499 aa) fasta scores: E(): 8.9e-26, 43.53% id in 503 aa, and to Pseudomonas aeruginosa probable phosphate transporter pa0450 SWALL:Q9I668 (EMBL:AE004482) (540 aa) fasta scores: E(): 6.9e-120, 64.97% id in 511 aa; phosphate transporter 2124793..2126379 Burkholderia pseudomallei K96243 3094892 YP_111573.1 CDS BPSS1567 NC_006351.1 2126529 2127311 D Similar to Ralstonia solanacearum hypothetical protein rsc2567 or rs00763 SWALL:Q8XWA7 (EMBL:AL646070) (250 aa) fasta scores: E(): 5.7e-70, 71.93% id in 228 aa, and to Rhizobium loti hypothetical protein Mlr1862 SWALL:Q98JN4 (EMBL:AP002998) (247 aa) fasta scores: E(): 3.1e-62, 60.56% id in 246 aa; hypothetical protein 2126529..2127311 Burkholderia pseudomallei K96243 3095655 YP_111574.1 CDS BPSS1568 NC_006351.1 2127907 2129514 D Similar to Rhizobium meliloti long-chain fatty-acid-CoA ligase rb1358 or smb20650 SWALL:Q92TY5 (EMBL:AL603646) (515 aa) fasta scores: E(): 9.6e-51, 39.27% id in 522 aa, and to Rhizobium loti long chain acyl-CoA synthetase mll6742 SWALL:Q988H2 (EMBL:AP003010) (511 aa) fasta scores: E(): 1.2e-46, 37.35% id in 522 aa; AMP-binding protein 2127907..2129514 Burkholderia pseudomallei K96243 3095342 YP_111575.1 CDS BPSS1569 NC_006351.1 2130282 2130974 D Similar to Pseudomonas aeruginosa PhzR or pa1898 SWALL:Q9RMS5 (EMBL:AF190630) (237 aa) fasta scores: E(): 6.4e-14, 34.5% id in 200 aa, and to Rhizobium sp. hypothetical transcriptional regulator Y4qH SWALL:Y4QH_RHISN (SWALL:P55629) (326 aa) fasta scores: E(): 9.8e-17, 35.71% id in 182 aa; N-acylhomoserine lactone-dependent regulatory protein 2130282..2130974 Burkholderia pseudomallei K96243 3095343 YP_111576.1 CDS BPSS1570 NC_006351.1 2131287 2131895 D Similar to Burkholderia multivorans N-acyl homoserine lactone synthase SWALL:Q93NN9 (EMBL:AF364058) (202 aa) fasta scores: E(): 4.5e-23, 43.97% id in 191 aa, and to Burkholderia cepacia N-acyl homoserine lactone synthase cepI SWALL:Q9AM52 (EMBL:AF330017) (202 aa) fasta scores: E(): 8.3e-23, 44.19% id in 181 aa; N-acylhomoserine lactone synthase 2131287..2131895 Burkholderia pseudomallei K96243 3096892 YP_111577.1 CDS BPSS1571 NC_006351.1 2132198 2133562 D Similar to Deinococcus radiodurans NADH oxidase-related protein dr2333 SWALL:Q9RRZ6 (EMBL:AE002064) (403 aa) fasta scores: E(): 1.2e-72, 50.12% id in 405 aa, and to Pseudomonas fluorescens MupC SWALL:Q8RL71 (EMBL:AF318063) (431 aa) fasta scores: E(): 7.5e-76, 50.82% id in 425 aa; NADH oxidoreductase 2132198..2133562 Burkholderia pseudomallei K96243 3095256 YP_111578.1 CDS tauC NC_006351.1 2133908 2134765 R Similar to Escherichia coli taurine transport system permease TauC or SsiC or b0367 SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 8e-53, 59.1% id in 247 aa, and to Pseudomonas putida ABC-type transporter membrane permease component TauC SWALL:BAC00966 (EMBL:AB086390) (279 aa) fasta scores: E(): 3.9e-56, 57.14% id in 273 aa; taurine ABC transporter permease complement(2133908..2134765) Burkholderia pseudomallei K96243 3096796 YP_111579.1 CDS tauB NC_006351.1 2134762 2135544 R Similar to Escherichia coli taurine transport ATP-binding protein TauB or SsiB or b0366 SWALL:TAUB_ECOLI (SWALL:Q47538) (255 aa) fasta scores: E(): 1.6e-41, 52.19% id in 251 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC taurine transporter pa3937 SWALL:Q9HX79 (EMBL:AE004811) (263 aa) fasta scores: E(): 8.4e-49, 56.58% id in 258 aa; ATP-binding component of taurine ABC transporter complement(2134762..2135544) Burkholderia pseudomallei K96243 3096834 YP_111580.1 CDS tauA NC_006351.1 2135565 2136575 R Similar to Escherichia coli taurine-binding periplasmic protein precursor TauA or SsiA or b0365 SWALL:TAUA_ECOLI (SWALL:Q47537) (320 aa) fasta scores: E(): 1.1e-51, 48.91% id in 323 aa, and to Pseudomonas aeruginosa probable periplasmic taurine-binding protein precursor pa3938 SWALL:Q9HX78 (EMBL:AE004811) (337 aa) fasta scores: E(): 6.5e-64, 55.45% id in 330 aa; periplasmic component of taurine ABC transporter complement(2135565..2136575) Burkholderia pseudomallei K96243 3096489 YP_111581.1 CDS tauD NC_006351.1 2136848 2137681 D catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; taurine dioxygenase 2136848..2137681 Burkholderia pseudomallei K96243 3096797 YP_111582.1 CDS BPSS1576 NC_006351.1 2138107 2139663 R Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein yhju or stm3624 or sty4176 or bcsG SWALL:Q8XFY5 (EMBL:AE008867) (559 aa) fasta scores: E(): 2.6e-50, 35.3% id in 541 aa, and to Escherichia coli hypothetical protein yhju yhju or b3538 SWALL:YHJU_ECOLI (SWALL:P37659) (559 aa) fasta scores: E(): 8.5e-51, 36.34% id in 542 aa; hypothetical protein complement(2138107..2139663) Burkholderia pseudomallei K96243 3095257 YP_111583.1 CDS bcsA NC_006351.1 2139697 2142237 R Similar to Escherichia coli O157:H7 cellulose synthase catalytic subunit [UDP-forming] BcsA or z4948 or ecs4413 SWALL:Q8X5L7 (EMBL:AE005579) (888 aa) fasta scores: E(): 1.6e-156, 48.61% id in 833 aa, and to Salmonella typhimurium cellulose synthase catalytic subunit [udp-forming] bcsa or stm3619 SWALL:Q93IN2 (EMBL:AJ315770) (874 aa) fasta scores: E(): 2.1e-156, 48.03% id in 816 aa; cellulose synthase catalytic subunit complement(2139697..2142237) Burkholderia pseudomallei K96243 3096079 YP_111584.1 CDS BPSS1578 NC_006351.1 2142234 2143097 R Similar to the C-terminal region of Pseudomonas fluorescens WssA SWALL:Q8RSZ2 (EMBL:AY074776) (344 aa) fasta scores: E(): 2.3e-10, 30.56% id in 265 aa. Full length CDS is similar to Chromobacterium violaceum hypothetical protein SWALL:Q7NUL8 (EMBL:AE016919) (252 aa) fasta scores: E(): 2.5e-06, 29.6% id in 277 aa; hypothetical protein complement(2142234..2143097) Burkholderia pseudomallei K96243 3096014 YP_111585.1 CDS BPSS1578a NC_006351.1 2143094 2143294 R No significant database matches. Doubtful CDS; hypothetical protein complement(2143094..2143294) Burkholderia pseudomallei K96243 3094959 YP_111586.1 CDS BPSS1579 NC_006351.1 2143303 2145534 R No significant database matches to the full length protein; hypothetical protein complement(2143303..2145534) Burkholderia pseudomallei K96243 3094960 YP_111587.1 CDS BPSS1580 NC_006351.1 2145560 2150062 R Similar to Acetobacter xylinus cellulose synthase 2 operon protein C precursor BcsciI SWALL:Q9WX71 (EMBL:AB015803) (1307 aa) fasta scores: E(): 3.8e-38, 28.41% id in 1327 aa, and to Acetobacter xylinus cellulose synthase operon protein c precursor acsC SWALL:ACSC_ACEXY (SWALL:P37718) (1319 aa) fasta scores: E(): 1.5e-08, 27.26% id in 1346 aa; cellulose biosynthesis protein complement(2145560..2150062) Burkholderia pseudomallei K96243 3095970 YP_111588.1 CDS bcsZ NC_006351.1 2150059 2151579 R catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase complement(2150059..2151579) Burkholderia pseudomallei K96243 3096132 YP_111589.1 CDS bcsB NC_006351.1 2151584 2153980 R binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein complement(2151584..2153980) Burkholderia pseudomallei K96243 3096080 YP_111590.1 CDS BPSS1582a NC_006351.1 2154301 2154891 D Weakly similar to Chromobacterium violaceum hypothetical protein CV0474 SWALL:Q7NPT2 (EMBL:AE016911) (184 aa) fasta scores: E(): 0.0084, 32.78% id in 183 aa. Doubtful CDS; hypothetical protein 2154301..2154891 Burkholderia pseudomallei K96243 3096075 YP_111591.1 CDS hipB NC_006351.1 2155047 2155451 D N-terminal region is similar to Escherichia coli protein HipB or b1508 SWALL:HIPB_ECOLI (SWALL:P23873) (88 aa) fasta scores: E(): 0.16, 30% id in 80 aa, and Ralstonia solanacearum transcription regulator protein HipB or rsp1252 or rs03197 SWALL:Q8XQH3 (EMBL:AL646083) (88 aa) fasta scores: E(): 0.0018, 46.26% id in 67 aa; transcriptional regulator 2155047..2155451 Burkholderia pseudomallei K96243 3095011 YP_111592.1 CDS hipA NC_006351.1 2155448 2156800 D Similar to Escherichia coli protein HipA or b1507 SWALL:HIPA_ECOLI (SWALL:P23874) (440 aa) fasta scores: E(): 1.1e-53, 38.82% id in 443 aa, and to Ralstonia solanacearum HipA transcription regulator protein hipa or rsc1446 or rs03861 SWALL:Q8XZF5 (EMBL:AL646064) (445 aa) fasta scores: E(): 9.3e-87, 52.82% id in 443 aa; regulatory protein 2155448..2156800 Burkholderia pseudomallei K96243 3095070 YP_111593.1 CDS BPSS1585 NC_006351.1 2156968 2157420 R hypothetical protein complement(2156968..2157420) Burkholderia pseudomallei K96243 3096076 YP_111594.1 CDS BPSS1586 NC_006351.1 2157837 2158751 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1145 SWALL:Q9I4J0 (EMBL:AE004544) (300 aa) fasta scores: E(): 7.1e-44, 41.41% id in 297 aa, and to Rhizobium loti transcriptional regulator mlr6990 SWALL:Q987M7 (EMBL:AP003010) (299 aa) fasta scores: E(): 1.3e-27, 32.42% id in 293 aa; LysR family transcriptional regulator complement(2157837..2158751) Burkholderia pseudomallei K96243 3094920 YP_111595.1 CDS speB NC_006351.1 2158918 2159871 D Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri agmatinase SpeB or b2937 or z4281 or ecs3812 or sf2927 SWALL:SPEB_ECOLI (SWALL:P16936) (306 aa) fasta scores: E(): 1.3e-23, 42.17% id in 294 aa, and to Pseudomonas aeruginosa agmatinase SpeB2 or pa1421 SWALL:Q9I3S3 (EMBL:AE004571) (319 aa) fasta scores: E(): 1.3e-89, 71.47% id in 319 aa; agmatinase 2158918..2159871 Burkholderia pseudomallei K96243 3096603 YP_111596.1 CDS BPSS1588 NC_006351.1 2160486 2161886 D hypothetical protein 2160486..2161886 Burkholderia pseudomallei K96243 3097129 YP_111597.1 CDS BPSS1589 NC_006351.1 2163237 2164037 D Similar to Pseudomonas putida hypothetical protein pp5399 SWALL:AAN70963 (EMBL:AE016794) (256 aa) fasta scores: E(): 7.6e-41, 46.18% id in 249 aa; hypothetical protein 2163237..2164037 Burkholderia pseudomallei K96243 3097130 YP_111598.1 CDS BPSS1590 NC_006351.1 2164292 2164522 D hypothetical protein 2164292..2164522 Burkholderia pseudomallei K96243 3096439 YP_111599.1 CDS BPSS1591 NC_006351.1 2164673 2165557 D hypothetical protein 2164673..2165557 Burkholderia pseudomallei K96243 3095725 YP_111600.1 CDS BPSS1592 NC_006351.1 2165625 2167430 R Similar to Burkholderia pseudomallei SctC SWALL:Q93L02 (EMBL:AF074878) (588 aa) fasta scores: E(): 5.5e-34, 51.72% id in 609 aa, and to Xanthomonas campestris hypersensitivity response secretion protein Hrpa1 precursor hrpa1 SWALL:HRA1_XANCV (SWALL:P80151) (607 aa) fasta scores: E(): 1.5e-56, 46.31% id in 611 aa; type III secretion system protein complement(2165625..2167430) Burkholderia pseudomallei K96243 3095726 YP_111601.1 CDS pilV NC_006351.1 2167547 2169220 R Similar to Escherichia coli minor fimbrial subunit PilV SWALL:Q93AE4 (EMBL:AF422146) (454 aa) fasta scores: E(): 0.00091, 27.79% id in 385 aa, and to Salmonella typhi PilV or sty4550 SWALL:O51801 (EMBL:AF000001) (435 aa) fasta scores: E(): 1.4e-05, 24.45% id in 458 aa; type IV pilus biosynthesis protein complement(2167547..2169220) Burkholderia pseudomallei K96243 3095393 YP_111602.1 CDS BPSS1594 NC_006351.1 2169229 2169708 R Similar to Streptomyces coelicolor hypothetical protein sco7368 sco7368 or sc9h11.22 SWALL:Q9KYL9 (EMBL:AL939131) (187 aa) fasta scores: E(): 9.7, 32.33% id in 133 aa; hypothetical protein complement(2169229..2169708) Burkholderia pseudomallei K96243 3095471 YP_111603.1 CDS pilS NC_006351.1 2169748 2170302 R Similar to Escherichia coli major pilin subunit PilS SWALL:Q93AE6 (EMBL:AF422146) (178 aa) fasta scores: E(): 0.00017, 25.64% id in 156 aa, and to Escherichia coli bundlin beta-1 BfpA SWALL:Q9F5V1 (EMBL:AF304471) (195 aa) fasta scores: E(): 3.2e-05, 28.31% id in 166 aa; major pilin subunit complement(2169748..2170302) Burkholderia pseudomallei K96243 3095297 YP_111604.1 CDS pilR NC_006351.1 2170335 2171411 R Similar to Escherichia coli BfpE SWALL:Q47071 (EMBL:Z68186) (352 aa) fasta scores: E(): 3e-47, 38.06% id in 352 aa, and to Salmonella typhi, and Salmonella dublin PilR or sty4546 SWALL:Q9ZIV0 (EMBL:AF000001) (361 aa) fasta scores: E(): 9.3e-29, 34.07% id in 361 aa; type IV pilus biosynthesis protein complement(2170335..2171411) Burkholderia pseudomallei K96243 3095470 YP_111605.1 CDS pilQ NC_006351.1 2171401 2173011 R Similar to Escherichia coli BfpD SWALL:Q47070 (EMBL:Z68186) (534 aa) fasta scores: E(): 3.2e-44, 35.28% id in 496 aa, and to Salmonella dublin PilQ SWALL:Q9KHW5 (EMBL:AF247502) (571 aa) fasta scores: E(): 2.5e-31, 33.33% id in 471 aa; type IV pilus biosynthesis protein complement(2171401..2173011) Burkholderia pseudomallei K96243 3095469 YP_111606.1 CDS BPSS1598 NC_006351.1 2173008 2173511 R hypothetical protein complement(2173008..2173511) Burkholderia pseudomallei K96243 3096322 YP_111607.1 CDS pilO NC_006351.1 2173522 2174820 R Weakly similar to Escherichia coli PilO SWALL:Q93D65 (EMBL:AF399919) (415 aa) fasta scores: E(): 0.016, 29% id in 231 aa; type IV pilus biosynthesis protein complement(2173522..2174820) Burkholderia pseudomallei K96243 3095346 YP_111608.1 CDS pilN NC_006351.1 2174832 2176601 R Similar to Escherichia coli PilN protein SWALL:Q9F533 (EMBL:AP002527) (547 aa) fasta scores: E(): 2.3e-27, 32.99% id in 588 aa, and to Yersinia pseudotuberculosis lipoprotein PilN SWALL:Q8KR30 (EMBL:AY047316) (530 aa) fasta scores: E(): 5.2e-27, 35.94% id in 409 aa; type IV pilus biosynthesis protein complement(2174832..2176601) Burkholderia pseudomallei K96243 3095327 YP_111609.1 CDS BPSS1601 NC_006351.1 2176601 2177170 R Similar to Escherichia coli BfpG SWALL:Q47067 (EMBL:Z68186) (133 aa) fasta scores: E(): 0.0014, 34.94% id in 83 aa; type IV pilus biosynthesis protein complement(2176601..2177170) Burkholderia pseudomallei K96243 3096323 YP_111610.1 CDS pilT NC_006351.1 2177487 2178593 D Similar to Neisseria gonorrhoeae twitching motility protein PilT SWALL:PILT_NEIGO (SWALL:Q06581) (374 aa) fasta scores: E(): 2.1e-25, 34.02% id in 291 aa, and to Pseudomonas aeruginosa twitching mobility protein PilT or pa0395 SWALL:PILT_PSEAE (SWALL:P24559) (344 aa) fasta scores: E(): 2.8e-24, 31.61% id in 329 aa; twitching motility protein 2177487..2178593 Burkholderia pseudomallei K96243 3095406 YP_111611.1 CDS BPSS1603 NC_006351.1 2178792 2180597 R Similar to Xanthomonas campestris hypersensitivity response secretion protein Hrpa1 precursor hrpa1 SWALL:HRA1_XANCV (SWALL:P80151) (607 aa) fasta scores: E(): 6.1e-11, 27.66% id in 459 aa, and to Yersinia enterocolitica yop proteins translocation protein C precursor YscC SWALL:YSCC_YEREN (SWALL:Q01244) (607 aa) fasta scores: E(): 3.4e-10, 30.98% id in 255 aa; secretion protein complement(2178792..2180597) Burkholderia pseudomallei K96243 3095637 YP_111612.1 CDS BPSS1604 NC_006351.1 2180594 2181328 R Similar to Escherichia coli phosphate regulon transcriptional regulatory protein PhoB or b0399 or z0497 or ecs0449 SWALL:PHOB_ECOLI (SWALL:P08402) (229 aa) fasta scores: E(): 2e-20, 33.18% id in 226 aa, and to Klebsiella pneumoniae phosphate regulon transcriptional regulatory protein PhoB SWALL:PHOB_KLEPN (SWALL:P45605) (229 aa) fasta scores: E(): 4e-21, 33.62% id in 226 aa; two-component system response regulator complement(2180594..2181328) Burkholderia pseudomallei K96243 3095320 YP_111613.1 CDS BPSS1605 NC_006351.1 2181394 2182479 R Similar to Deinococcus radiodurans sensor histidine kinase dr1606 SWALL:Q9RTZ2 (EMBL:AE002004) (433 aa) fasta scores: E(): 4.8e-10, 30.22% id in 354 aa; two-component system sensor kinase complement(2181394..2182479) Burkholderia pseudomallei K96243 3095321 YP_111614.1 CDS BPSS1606 NC_006351.1 2182607 2183251 R hypothetical protein complement(2182607..2183251) Burkholderia pseudomallei K96243 3096533 YP_111615.1 CDS BPSS1607 NC_006351.1 2183466 2183954 D Similar to Xanthomonas campestris HrpB1 SWALL:Q56781 (EMBL:U33548) (151 aa) fasta scores: E(): 9.6e-05, 28.07% id in 114 aa, and to Xanthomonas campestris HrpB1 protein or xcc1231 SWALL:AAM40529 (EMBL:AE012222) (151 aa) fasta scores: E(): 9.6e-05, 29.33% id in 150 aa; hypothetical protein 2183466..2183954 Burkholderia pseudomallei K96243 3096161 YP_111616.1 CDS BPSS1608 NC_006351.1 2184499 2185161 R Similar to Agrobacterium tumefaciens acetyltransferase atu4896 or agr_l_4 SWALL:Q8U6B2 (EMBL:AE009417) (200 aa) fasta scores: E(): 7.2e-06, 26.08% id in 184 aa, and to Thermoanaerobacter tengcongensis acetyltransferases, including N-acetylases of ribosomal proteins riml or tte1540 SWALL:Q8R9Q9 (EMBL:AE013110) (185 aa) fasta scores: E(): 0.0013, 25.54% id in 184 aa; hypothetical protein complement(2184499..2185161) Burkholderia pseudomallei K96243 3096162 YP_111617.1 CDS BPSS1609 NC_006351.1 2185370 2186017 D Similar to Gossypium hirsutum proline-rich cell wall protein SWALL:Q39789 (EMBL:L17308) (214 aa) fasta scores: E(): 1.3, 24.74% id in 198 aa; hypothetical protein 2185370..2186017 Burkholderia pseudomallei K96243 3096937 YP_111618.1 CDS BPSS1610 NC_006351.1 2186573 2188018 R Similar to Ralstonia solanacearum regulatory protein HrpB or rsp0873 or rs01644 SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 1e-53, 37.65% id in 486 aa, and to Burkholderia pseudomallei hypothetical 54.7 kDa protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 2.9e-59, 41.17% id in 493 aa; AraC family transcription regulator complement(2186573..2188018) Burkholderia pseudomallei K96243 3095884 YP_111619.1 CDS BPSS1611 NC_006351.1 2188230 2188685 R Similar to Xanthomonas campestris HpaB SWALL:Q9WWG3 (EMBL:AF056246) (162 aa) fasta scores: E(): 2e-29, 53.84% id in 156 aa, and to Burkholderia pseudomallei hypothetical 16.8 kDa protein SWALL:Q93KY8 (EMBL:AF074878) (151 aa) fasta scores: E(): 2e-41, 68% id in 150 aa; hypothetical protein complement(2188230..2188685) Burkholderia pseudomallei K96243 3095885 YP_111620.1 CDS BPSS1612 NC_006351.1 2188778 2188966 R hypothetical protein complement(2188778..2188966) Burkholderia pseudomallei K96243 3096034 YP_111621.1 CDS BPSS1613 NC_006351.1 2189128 2189379 R Similar to Burkholderia pseudomallei hypothetical 8.8 kDa protein SWALL:Q93KY9 (EMBL:AF074878) (82 aa) fasta scores: E(): 0.0014, 37.34% id in 83 aa, and to Xanthomonas axonopodis HrpD6 protein or xac0398 SWALL:Q8PQC8 (EMBL:AE011666) (80 aa) fasta scores: E(): 8.1, 25.67% id in 74 aa; type III secretion protein complement(2189128..2189379) Burkholderia pseudomallei K96243 3096787 YP_111622.1 CDS BPSS1614 NC_006351.1 2189407 2190390 R Similar to Burkholderia pseudomallei SctD SWALL:Q93KZ0 (EMBL:AF074878) (349 aa) fasta scores: E(): 2.3e-32, 42.38% id in 335 aa, and to Xanthomonas campestris Hrpd5 SWALL:Q9WWG0 (EMBL:AF056246) (312 aa) fasta scores: E(): 1.2e-14, 32.51% id in 326 aa; type III secretion protein complement(2189407..2190390) Burkholderia pseudomallei K96243 3096788 YP_111623.1 CDS BPSS1615 NC_006351.1 2190586 2191455 R Similar to Xanthomonas campestris HpaA protein or xcc1224 SWALL:AAM40522 (EMBL:AE012221) (271 aa) fasta scores: E(): 0.00061, 29.91% id in 234 aa, and to Burkholderia pseudomallei hypothetical 34.4 kDa protein SWALL:Q9ZGQ9 (EMBL:AF074878) (317 aa) fasta scores: E(): 2.3e-06, 30.14% id in 282 aa; type III secretion protein complement(2190586..2191455) Burkholderia pseudomallei K96243 3096219 YP_111624.1 CDS BPSS1616 NC_006351.1 2191452 2191715 R Similar to Burkholderia pseudomallei SctS SWALL:Q9ZGR0 (EMBL:AF074878) (87 aa) fasta scores: E(): 5.3e-16, 58.14% id in 86 aa, and to Xanthomonas oryzae pv. oryzicola HrcS SWALL:Q93MH8 (EMBL:AF404819) (86 aa) fasta scores: E(): 2.2e-15, 53.48% id in 86 aa; type III secretion protein complement(2191452..2191715) Burkholderia pseudomallei K96243 3095167 YP_111625.1 CDS BPSS1617 NC_006351.1 2191756 2192406 R part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein complement(2191756..2192406) Burkholderia pseudomallei K96243 3095168 YP_111626.1 CDS BPSS1618 NC_006351.1 2192393 2193679 R Similar to Burkholderia pseudomallei SctQ SWALL:Q9ZGR1 (EMBL:AF074878) (310 aa) fasta scores: E(): 4.5e-10, 32.7% id in 373 aa, and to Xanthomonas campestris HrcQ SWALL:Q9WWF7 (EMBL:AF056246) (268 aa) fasta scores: E(): 6.3e-07, 30.38% id in 316 aa; type III secretion protein complement(2192393..2193679) Burkholderia pseudomallei K96243 3096820 YP_111627.1 CDS BPSS1619 NC_006351.1 2193709 2194320 R Similar to Burkholderia pseudomallei hypothetical 24.8 kDa protein SWALL:Q9ZGR2 (EMBL:AF074878) (227 aa) fasta scores: E(): 4.2e-08, 35.13% id in 222 aa, and to Ralstonia solanacearum Hrp associated protein HpaP or rsp0862 or rs01633 SWALL:HPAP_RALSO (SWALL:P35651) (197 aa) fasta scores: E(): 3.8e-06, 33.51% id in 188 aa; type III secretion protein complement(2193709..2194320) Burkholderia pseudomallei K96243 3096417 YP_111628.1 CDS BPSS1620 NC_006351.1 2194317 2196389 R Similar to Ralstonia solanacearum hypersensitivity response secretion protein HrcV or HrpO or rsp0863 or rs01634 SWALL:HRCV_RALSO (SWALL:P35656) (690 aa) fasta scores: E(): 4.6e-146, 60.49% id in 681 aa, and to Acidovorax avenae subsp. avenae HrpO SWALL:Q9F1J6 (EMBL:AB053454) (674 aa) fasta scores: E(): 6.3e-123, 55.78% id in 674 aa; type III secretion protein complement(2194317..2196389) Burkholderia pseudomallei K96243 3096418 YP_111629.1 CDS BPSS1621 NC_006351.1 2196386 2197468 R Similar to Burkholderia pseudomallei SctU SWALL:Q93KZ2 (EMBL:AF074878) (351 aa) fasta scores: E(): 7.7e-60, 47.85% id in 349 aa, and to Ralstonia solanacearum hypersensitivity response secretion protein HrcU or HrpN or rsp0864 or rs01635 SWALL:HRCU_RALSO (SWALL:P35652) (357 aa) fasta scores: E(): 6.8e-54, 48.01% id in 352 aa; type III secretion system protein HrcU complement(2196386..2197468) Burkholderia pseudomallei K96243 3096071 YP_111630.1 CDS BPSS1622 NC_006351.1 2197704 2198285 D Similar to Burkholderia pseudomallei hypothetical 19.6 kDa protein SWALL:Q93KZ3 (EMBL:AF074878) (178 aa) fasta scores: E(): 2.1e-14, 35.29% id in 170 aa, and to Xanthomonas oryzae HrpBL SWALL:Q9K2Q2 (EMBL:AB045311) (151 aa) fasta scores: E(): 4.2e-05, 31.7% id in 123 aa; type III secretion protein 2197704..2198285 Burkholderia pseudomallei K96243 3095189 YP_111631.1 CDS BPSS1623 NC_006351.1 2198299 2198715 D Similar to Xanthomonas oryzae Hrpb2 SWALL:Q9K3A4 (EMBL:AB045311) (130 aa) fasta scores: E(): 8.7e-06, 30.08% id in 123 aa, and to Xanthomonas campestris Hrpb2 SWALL:Q56782 (EMBL:U33548) (130 aa) fasta scores: E(): 1.9e-05, 29.26% id in 123 aa; type III secretion protein 2198299..2198715 Burkholderia pseudomallei K96243 3095190 YP_111632.1 CDS BPSS1624 NC_006351.1 2198712 2199566 D Similar to Burkholderia pseudomallei SctJ SWALL:Q93KZ5 (EMBL:AF074878) (274 aa) fasta scores: E(): 8.5e-50, 60.44% id in 273 aa, and to Ralstonia solanacearum Hrp conserved lipoprotein HrcJ or rsp0867 or rs01638 SWALL:Q52492 (EMBL:AJ245811) (269 aa) fasta scores: E(): 5.4e-42, 54.51% id in 266 aa; type III secretion protein 2198712..2199566 Burkholderia pseudomallei K96243 3095191 YP_111633.1 CDS BPSS1625 NC_006351.1 2199563 2200240 D Similar to Xanthomonas oryzae HrpB4 SWALL:Q9LBD4 (EMBL:AF026197) (209 aa) fasta scores: E(): 0.0038, 29.41% id in 204 aa, and to Ralstonia solanacearum HrpH protein or rsp0868 or rs01639 SWALL:Q52493 (EMBL:AJ245811) (209 aa) fasta scores: E(): 0.0068, 33.89% id in 177 aa; type III secretion protein 2199563..2200240 Burkholderia pseudomallei K96243 3095589 YP_111634.1 CDS BPSS1626 NC_006351.1 2200225 2200941 D Similar to Burkholderia pseudomallei SctL SWALL:Q93KZ7 (EMBL:AF074878) (289 aa) fasta scores: E(): 1.6e-30, 45.79% id in 238 aa, and to Ralstonia solanacearum HrpF protein or rsp0869 or rs01640 SWALL:Q8XRH8 (EMBL:AL646081) (301 aa) fasta scores: E(): 2.8e-16, 38.26% id in 230 aa; type III secretion system protein HrpB 2200225..2200941 Burkholderia pseudomallei K96243 3095590 YP_111635.1 CDS BPSS1627 NC_006351.1 2200938 2202266 D Similar to Burkholderia pseudomallei SctN SWALL:Q93KZ8 (EMBL:AF074878) (449 aa) fasta scores: E(): 1.1e-115, 73.22% id in 437 aa, and to Xanthomonas campestris probable ATP synthase HrpB6 SWALL:HRB6_XANCV (SWALL:P80153) (442 aa) fasta scores: E(): 4.4e-106, 71.63% id in 416 aa; type III secretion system ATPase 2200938..2202266 Burkholderia pseudomallei K96243 3095522 YP_111636.1 CDS BPSS1628 NC_006351.1 2202263 2202790 D Similar to Burkholderia pseudomallei orf7 SWALL:Q93KZ9 (EMBL:AF074878) (168 aa) fasta scores: E(): 4.1e-08, 33.95% id in 162 aa, and to Ralstonia solanacearum HrpD protein SWALL:Q52496 (EMBL:AJ245811) (166 aa) fasta scores: E(): 0.0027, 32.14% id in 140 aa; type III secretion protein 2202263..2202790 Burkholderia pseudomallei K96243 3096887 YP_111637.1 CDS BPSS1629 NC_006351.1 2202787 2203818 D Similar to Burkholderia pseudomallei SctT SWALL:Q93L00 (EMBL:AF074878) (240 aa) fasta scores: E(): 4.4e-34, 49.78% id in 231 aa, and to Xanthomonas campestris HrpB8 protein HrcT or xcc1238 SWALL:AAM40536 (EMBL:AE012222) (276 aa) fasta scores: E(): 5.2e-30, 43.12% id in 269 aa. CDS is extended at the C-terminus in comparison to similar proteins.; type III secretion protein 2202787..2203818 Burkholderia pseudomallei K96243 3096888 YP_111638.1 CDS BPSS1630 NC_006351.1 2204186 2205952 D C-terminal region is similar to Ralstonia solanacearum hypothetical transmembrane protein rsp0101 or rs03022 SWALL:Q8XTK7 (EMBL:AL646076) (484 aa) fasta scores: E(): 6.2e-08, 27.91% id in 498 aa; hypothetical protein 2204186..2205952 Burkholderia pseudomallei K96243 3096210 YP_111639.1 CDS BPSS1631 NC_006351.1 2206192 2207145 R Similar to Pseudomonas aeruginosa hypothetical protein Pa2304 SWALL:Q9I1H1 (EMBL:AE004656) (362 aa) fasta scores: E(): 1.4e-39, 41.03% id in 290 aa, and to Streptomyces avermitilis SyrP-like protein SWALL:Q93H52 (EMBL:AB070951) (311 aa) fasta scores: E(): 1.4e-39, 40.7% id in 285 aa; hypothetical protein complement(2206192..2207145) Burkholderia pseudomallei K96243 3095627 YP_111640.1 CDS BPSS1632 NC_006351.1 2207213 2225497 R Similar to Ralstonia solanacearum probable peptide synthetase rsp0641 or rs05860 SWALL:Q8XS40 (EMBL:AL646079) (6889 aa) fasta scores: E(): 0, 45.74% id in 4411 aa, and to Pseudomonas syringae syringomycin synthetase syrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 6.6e-215, 40.88% id in 5709 aa; non-ribosomal peptide synthetase complement(2207213..2225497) Burkholderia pseudomallei K96243 3095628 YP_111641.1 CDS BPSS1633 NC_006351.1 2225494 2238816 R Similar to Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 5.4e-169, 43.97% id in 4498 aa, and to Xenorhabdus bovienii peptide synthetase XpsB SWALL:Q8VQF8 (EMBL:AF455810) (3316 aa) fasta scores: E(): 4.3e-157, 42.45% id in 3387 aa; non-ribosomal peptide synthetase complement(2225494..2238816) Burkholderia pseudomallei K96243 3095217 YP_111642.1 CDS BPSS1634 NC_006351.1 2238813 2248688 R Similar to Nostoc sp. GSV224 NosC SWALL:Q9RAH2 (EMBL:AF204805) (3317 aa) fasta scores: E(): 0, 36.9% id in 3390 aa, and to Ralstonia solanacearum probable peptide synthetase rsp0642 or rs05859 SWALL:Q8XS39 (EMBL:AL646079) (5953 aa) fasta scores: E(): 0, 47.91% id in 3304 aa; non-ribosomal peptide synthetase complement(2238813..2248688) Burkholderia pseudomallei K96243 3097150 YP_111643.1 CDS BPSS1635 NC_006351.1 2248989 2251772 R Similar over the N-terminal region to Rhizobium meliloti diaminobutyrate--2-oxoglutarate aminotransferase RhbA or RhsA or ra1258 or sma2400 SWALL:RHBA_RHIME (SWALL:Q9Z3R2) (470 aa) fasta scores: E(): 1.1e-81, 53.84% id in 429 aa, and to Pseudomonas aeruginosa probable class III aminotransferase pa2413 SWALL:Q9I168 (EMBL:AE004668) (469 aa) fasta scores: E(): 1.6e-82, 54.48% id in 435 aa; class III aminotransferase complement(2248989..2251772) Burkholderia pseudomallei K96243 3097151 YP_111644.1 CDS poxB NC_006351.1 2253512 2255230 R catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase complement(2253512..2255230) Burkholderia pseudomallei K96243 3095863 YP_111645.1 CDS cat2 NC_006351.1 2255243 2256574 R Similar to Clostridium kluyveri 4-hydroxybutyrate coenzyme A transferase Cat2 SWALL:CAT2_CLOKL (SWALL:P38942) (429 aa) fasta scores: E(): 2.1e-59, 42.75% id in 428 aa, and to Yersinia pestis similar to 4-hydroxybutyrate CoA transferase ypo1926 or y2385 SWALL:Q9ZC36 (EMBL:AL031866) (440 aa) fasta scores: E(): 2.3e-102, 60.13% id in 439 aa; 4-hydroxybutyrate CoA-transferase complement(2255243..2256574) Burkholderia pseudomallei K96243 3096515 YP_111646.1 CDS BPSS1638 NC_006351.1 2256599 2257126 R Similar to Salmonella enteritidis FkbR2 SWALL:Q93DX2 (EMBL:AF376036) (175 aa) fasta scores: E(): 3.6e-51, 74.28% id in 175 aa, and to Yersinia pestis similar to regulatory proteins ypo1927 SWALL:Q9ZC37 (EMBL:AL031866) (180 aa) fasta scores: E(): 1.2e-55, 76.57% id in 175 aa; hydratase complement(2256599..2257126) Burkholderia pseudomallei K96243 3095769 YP_111647.1 CDS BPSS1639 NC_006351.1 2257163 2258044 R Similar to Leuconostoc mesenteroides citrate lyase beta chain CitE SWALL:CILB_LEUMC (SWALL:O53078) (302 aa) fasta scores: E(): 3.9e-14, 33.09% id in 284 aa, and to Yersinia pestis similar to CitE ypo1928 or y2383 SWALL:Q9ZC38 (EMBL:AL031866) (280 aa) fasta scores: E(): 1.7e-36, 46.29% id in 270 aa; citrate lyase subunit beta complement(2257163..2258044) Burkholderia pseudomallei K96243 3096759 YP_111648.1 CDS BPSS1640 NC_006351.1 2258149 2259060 R Similar to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1077 SWALL:Q8YB24 (EMBL:AE009740) (294 aa) fasta scores: E(): 3.6e-60, 53.55% id in 295 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1267 or rs05312 SWALL:Q8XQG0 (EMBL:AL646083) (294 aa) fasta scores: E(): 2.9e-56, 52.54% id in 295 aa; LysR family transcriptional regulator complement(2258149..2259060) Burkholderia pseudomallei K96243 3096760 YP_111649.1 CDS BPSS1643 NC_006351.1 2259622 2260542 R Similar to Pseudomonas aeruginosa transcriptional regulator PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 7e-29, 35.21% id in 301 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa1312 SWALL:Q9I432 (EMBL:AE004560) (303 aa) fasta scores: E(): 4.2e-56, 55.1% id in 294 aa; LysR family transcriptional regulator complement(2259622..2260542) Burkholderia pseudomallei K96243 3095831 YP_111650.1 CDS BPSS1644 NC_006351.1 2260651 2262048 D Similar to Pseudomonas aeruginosa probable MFS transporter pa1313 SWALL:Q9I431 (EMBL:AE004560) (452 aa) fasta scores: E(): 2.3e-73, 51.78% id in 448 aa, and to Streptomyces coelicolor efflux membrane protein sco2498 or scc121.01 or scc82.04 SWALL:CAD55309 (EMBL:AL939112) (481 aa) fasta scores: E(): 3.5e-27, 31.16% id in 430 aa; hypothetical protein 2260651..2262048 Burkholderia pseudomallei K96243 3097123 YP_111651.1 CDS BPSS1645 NC_006351.1 2262045 2262443 D Similar to Pseudomonas aeruginosa hypothetical protein Pa1314 SWALL:Q9I430 (EMBL:AE004560) (128 aa) fasta scores: E(): 2.4e-17, 48% id in 125 aa, and to Salmonella typhimurium cytoplasmic protein stm2910 SWALL:Q8ZMH1 (EMBL:AE008832) (126 aa) fasta scores: E(): 3.5e-14, 41.86% id in 129 aa; hypothetical protein 2262045..2262443 Burkholderia pseudomallei K96243 3097124 YP_111652.1 CDS BPSS1646 NC_006351.1 2262606 2263775 R Similar to Pseudomonas aeruginosa probable two-component sensor pa2571 SWALL:Q9I0R5 (EMBL:AE004685) (470 aa) fasta scores: E(): 1.4e-47, 46.91% id in 373 aa, and to Xanthomonas campestris histidine kinase xcc1957 SWALL:AAM41246 (EMBL:AE012299) (408 aa) fasta scores: E(): 2.1e-47, 50.95% id in 314 aa; two-component sensor kinase complement(2262606..2263775) Burkholderia pseudomallei K96243 3096560 YP_111653.1 CDS BPSS1647 NC_006351.1 2263768 2264946 R Similar to Pseudomonas aeruginosa hypothetical protein Pa1975 SWALL:Q9I2D0 (EMBL:AE004624) (387 aa) fasta scores: E(): 8.4e-50, 41.75% id in 364 aa, and to Rhizobium loti hypothetical protein Mlr1131 SWALL:Q98L89 (EMBL:AP002996) (361 aa) fasta scores: E(): 7.8e-48, 41.31% id in 351 aa; hypothetical protein complement(2263768..2264946) Burkholderia pseudomallei K96243 3096241 YP_111654.1 CDS BPSS1648 NC_006351.1 2265019 2266446 R Similar to Pseudomonas aeruginosa probable two-component response regulator pa2572 SWALL:Q9I0R4 (EMBL:AE004685) (447 aa) fasta scores: E(): 1.5e-46, 37.41% id in 425 aa, and to Vibrio cholerae response regulator vc1087 SWALL:Q9KT18 (EMBL:AE004189) (447 aa) fasta scores: E(): 1.3e-18, 30.75% id in 439 aa; two-component response regulator complement(2265019..2266446) Burkholderia pseudomallei K96243 3096242 YP_111655.1 CDS BPSS1649 NC_006351.1 2266833 2269253 D Similar over its C-terminal region to Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 4.1e-70, 42.12% id in 489 aa, and partly to Polyangium cellulosum beta-mannanase SWALL:Q9ADL2 (EMBL:U24241) (502 aa) fasta scores: E(): 6.2e-10, 25.71% id in 350 aa; sugar-binding protein 2266833..2269253 Burkholderia pseudomallei K96243 3094967 YP_111656.1 CDS BPSS1650 NC_006351.1 2269250 2269741 D hypothetical protein 2269250..2269741 Burkholderia pseudomallei K96243 3094968 YP_111657.1 CDS BPSS1651 NC_006351.1 2269728 2270342 D Similar to Ralstonia solanacearum transmembrane protein rsc2292 or rs01263 SWALL:Q8XX26 (EMBL:AL646069) (207 aa) fasta scores: E(): 2e-09, 32.14% id in 168 aa; hypothetical protein 2269728..2270342 Burkholderia pseudomallei K96243 3095390 YP_111658.1 CDS BPSS1652 NC_006351.1 2270441 2271439 R Similar to Anabaena sp. patatin-like protein all2302 SWALL:Q8YUN7 (EMBL:AP003589) (390 aa) fasta scores: E(): 1.4e-07, 27.57% id in 330 aa, and to Oryza sativa patatin-like protein p0506a10.15 or p0674h09.28 SWALL:Q8S0E1 (EMBL:AP003418) (411 aa) fasta scores: E(): 8.9e-06, 26.73% id in 318 aa; patatin-like protein complement(2270441..2271439) Burkholderia pseudomallei K96243 3095457 YP_111659.1 CDS BPSS1653 NC_006351.1 2272044 2272613 R Similar over the C-terminal region to Ralstonia solanacearum 4-hydroxybenzoate transporter transmembrane protein rsp0896 or rs01667 SWALL:Q8XRF8 (EMBL:AL646081) (458 aa) fasta scores: E(): 4.2e-09, 38.4% id in 138 aa, and to Alcaligenes eutrophus orf TfdK SWALL:P70737 (EMBL:U16782) (460 aa) fasta scores: E(): 8.1e-08, 32.06% id in 131 aa; hypothetical protein complement(2272044..2272613) Burkholderia pseudomallei K96243 3095458 YP_111660.1 CDS BPSS1654 NC_006351.1 2272681 2275035 R Similar to Rhodococcus sp. NCIMB 9784 cytochrome P450 Rhf p450rhF SWALL:Q8KU27 (EMBL:AF459424) (773 aa) fasta scores: E(): 8.5e-183, 62.83% id in 783 aa, and to Rhodococcus erythropolis cytochrome p450 116 ThcB or Cyp116 SWALL:THCB_RHOER (SWALL:P43492) (436 aa) fasta scores: E(): 1.1e-88, 56.08% id in 419 aa; cytochrome P450 complement(2272681..2275035) Burkholderia pseudomallei K96243 3094930 YP_111661.1 CDS BPSS1655 NC_006351.1 2275313 2275453 D hypothetical protein 2275313..2275453 Burkholderia pseudomallei K96243 3095555 YP_111662.1 CDS BPSS1656 NC_006351.1 2275525 2276781 D Similar to Streptomyces atroolivaceus antibiotic transport protein SWALL:AAN85500 (EMBL:AF484556) (432 aa) fasta scores: E(): 1.4e-27, 31.64% id in 395 aa, and to Bradyrhizobium japonicum Blr5045 protein blr5045 SWALL:BAC50310 (EMBL:AP005953) (414 aa) fasta scores: E(): 2.4e-24, 32.39% id in 392 aa; hypothetical protein 2275525..2276781 Burkholderia pseudomallei K96243 3095556 YP_111663.1 CDS bglB NC_006351.1 2277526 2279721 D Similar to Thermotoga neapolitana beta-glucosidase BglB SWALL:Q60038 (EMBL:Z77856) (720 aa) fasta scores: E(): 6.4e-57, 32.24% id in 732 aa, and to Cellvibrio gilvus beta-D-glucosidase precursor Cgb SWALL:P96316 (EMBL:D14068) (752 aa) fasta scores: E(): 4.6e-51, 42.05% id in 749 aa; beta-glucosidase 2277526..2279721 Burkholderia pseudomallei K96243 3097236 YP_111664.1 CDS BPSS1658 NC_006351.1 2280113 2280697 D No significant database matches. Possible alternative translational start sites; hypothetical protein 2280113..2280697 Burkholderia pseudomallei K96243 3096980 YP_111665.1 CDS BPSS1659 NC_006351.1 2280838 2281125 D hypothetical protein 2280838..2281125 Burkholderia pseudomallei K96243 3096460 YP_111666.1 CDS BPSS1660 NC_006351.1 2281205 2281687 D Similar to Ralstonia solanacearum hypothetical protein rsc2888 or rs00212 SWALL:Q8XVE3 (EMBL:AL646072) (152 aa) fasta scores: E(): 8.7e-20, 42.5% id in 160 aa, and to Yersinia pestis hypothetical protein ypo1877 or y2433 SWALL:Q8ZF41 (EMBL:AJ414150) (101 aa) fasta scores: E(): 2e-09, 42.7% id in 96 aa; hypothetical protein 2281205..2281687 Burkholderia pseudomallei K96243 3096461 YP_111667.1 CDS BPSS1661 NC_006351.1 2281756 2281971 D hypothetical protein 2281756..2281971 Burkholderia pseudomallei K96243 3095642 YP_111668.1 CDS selB NC_006351.1 2282552 2284477 R Similar to Escherichia coli selenocysteine-specific elongation factor SelB or FdhA or b3590 SWALL:SELB_ECOLI (SWALL:P14081) (614 aa) fasta scores: E(): 1.4e-43, 42.45% id in 636 aa, and to Pseudomonas aeruginosa selenocysteine-specific elongation factor SelB or pa4807 SWALL:Q9HV02 (EMBL:AE004893) (641 aa) fasta scores: E(): 5.8e-97, 49.76% id in 639 aa; selenocysteine-specific elongation factor complement(2282552..2284477) Burkholderia pseudomallei K96243 3095660 YP_111669.1 CDS selA NC_006351.1 2284474 2285916 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(2284474..2285916) Burkholderia pseudomallei K96243 3095756 YP_111670.1 CDS fdhE NC_006351.1 2285913 2286881 R Similar to Escherichia coli protein FdhE or b3891 SWALL:FDHE_ECOLI (SWALL:P13024) (309 aa) fasta scores: E(): 4.8e-35, 39.67% id in 305 aa, and to Salmonella typhi protein FdhE or sty3843 SWALL:Q8Z2U4 (EMBL:AL627279) (309 aa) fasta scores: E(): 2.1e-35, 40.32% id in 305 aa; protein FdhE complement(2285913..2286881) Burkholderia pseudomallei K96243 3094981 YP_111671.1 CDS fdoI NC_006351.1 2287056 2287682 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 formate dehydrogenase, cytochrome B556 (FDO) subunit FdoI or b3892 or c4842 or z5434 or ecs4818 SWALL:FDOI_ECOLI (SWALL:P32174) (211 aa) fasta scores: E(): 4.6e-42, 54.32% id in 208 aa, and to Pseudomonas aeruginosa nitrate-inducible formate dehydrogenase, gamma subunit FdnI or pa4810 SWALL:Q9HUZ9 (EMBL:AE004894) (208 aa) fasta scores: E(): 1e-50, 62.81% id in 199 aa; formate dehydrogenase, cytochrome b556 (FDO) subunit complement(2287056..2287682) Burkholderia pseudomallei K96243 3095425 YP_111672.1 CDS fdoH NC_006351.1 2287679 2288593 R Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri formate dehydrogenase-O, iron-sulfur subunit FdoH or b3893 or c4843 or sf3969 SWALL:FDOH_ECOLI (SWALL:P32175) (300 aa) fasta scores: E(): 2.4e-81, 68.21% id in 302 aa, and to Yersinia pestis formate dehydrogenase-o, iron-sulfur subunit fdoh or ypo4057 or y4077 SWALL:Q8Z9X8 (EMBL:AJ414160) (323 aa) fasta scores: E(): 1.8e-84, 72.26% id in 292 aa; formate dehydrogenase-O, iron-sulfur subunit complement(2287679..2288593) Burkholderia pseudomallei K96243 3095192 YP_111673.1 CDS fdoG NC_006351.1 2288604 2291675 R Similar to Escherichia coli formate dehydrogenase-O, major subunit Fdog or b3894 SWALL:FDOG_ECOLI (SWALL:P32176) (1016 aa) fasta scores: E(): 0, 66.6% id in 1021 aa, and to Shigella flexneri formate dehydrogenase-O, major subunit Fdog or sf3970 SWALL:AAN45405 (EMBL:AE015404) (1016 aa) fasta scores: E(): 0, 66.69% id in 1021 aa. This CDS contains an in-frame opal codon, UGA, at position 197. This opal codon encodes selenocysteine, which forms the active-site of the protein; formate dehydrogenase-O, major subunit complement(join(2288604..2291084,2291088..2291675)) Burkholderia pseudomallei K96243 3094982 YP_111674.1 CDS BPSS1669 NC_006351.1 2292615 2293382 R Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc0146 or rs01016 SWALL:Q8Y335 (EMBL:AL646057) (251 aa) fasta scores: E(): 2e-61, 59.6% id in 255 aa, and to Xanthomonas axonopodis hypothetical protein Xac1712 xac1712 SWALL:Q8PLS7 (EMBL:AE011803) (253 aa) fasta scores: E(): 2.8e-45, 50.78% id in 254 aa; hypothetical protein complement(2292615..2293382) Burkholderia pseudomallei K96243 3095163 YP_111675.1 CDS BPSS1670 NC_006351.1 2293634 2294569 R Similar to Agrobacterium tumefaciens ABC transporter substrate binding protein atu3415 or agr_l_2813 SWALL:Q8UAF9 (EMBL:AE009272) (355 aa) fasta scores: E(): 3.3e-65, 58.11% id in 308 aa, and to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 3.9e-07, 26.89% id in 238 aa. Note: Also similar to BPSS1674 (329 aa) fasta scores: E(): 1.4e-51, 57.097% identity in 310 aa overlap; hypothetical protein complement(2293634..2294569) Burkholderia pseudomallei K96243 3095164 YP_111676.1 CDS BPSS1671 NC_006351.1 2295168 2297078 R Similar in its full length to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu3417 or agr_l_2810 SWALL:Q8UAF7 (EMBL:AE009272) (592 aa) fasta scores: E(): 1.6e-59, 66.61% id in 626 aa, and in its N-terminal region to Streptomyces coelicolor ATP-binding protein AtrC or sco5258 or 2sc7g11.20C SWALL:Q9F3K7 (EMBL:AL939123) (253 aa) fasta scores: E(): 2.3e-39, 59.83% id in 249 aa; ABC transporter ATP-binding protein complement(2295168..2297078) Burkholderia pseudomallei K96243 3096511 YP_111677.1 CDS BPSS1672 NC_006351.1 2297194 2298516 R Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 1.9e-48, 37.77% id in 450 aa, and to Agrobacterium tumefaciens monooxygenase atu3420 or agr_l_2804 SWALL:Q8UAF4 (EMBL:AE009272) (453 aa) fasta scores: E(): 1.1e-124, 72.45% id in 432 aa; monooxygenase complement(2297194..2298516) Burkholderia pseudomallei K96243 3095043 YP_111678.1 CDS BPSS1673 NC_006351.1 2298572 2299573 R Similar to Agrobacterium tumefaciens hypothetical protein catu3421 or agr_l_2803 SWALL:Q8UAF3 (EMBL:AE009272) (335 aa) fasta scores: E(): 5.2e-67, 56.88% id in 327 aa, and to Bacillus subtilis hypothetical protein YwcH or ipa-44D SWALL:YWCH_BACSU (SWALL:P39606) (333 aa) fasta scores: E(): 5.3e-37, 42.16% id in 332 aa; hypothetical protein complement(2298572..2299573) Burkholderia pseudomallei K96243 3095044 YP_111679.1 CDS BPSS1674 NC_006351.1 2299893 2300846 R Similar to Agrobacterium tumefaciens ABC transporter substrate binding protein atu3415 or agr_l_2813 SWALL:Q8UAF9 (EMBL:AE009272) (355 aa) fasta scores: E(): 8.3e-65, 55.8% id in 310 aa, and to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 8e-12, 32.91% id in 237 aa. Note: Also similar to BPSS1670 (312 aa) fasta scores: E(): 1.6e-56, 57.097% identity in 310 aa overlap; hypothetical protein complement(2299893..2300846) Burkholderia pseudomallei K96243 3096057 YP_111680.1 CDS BPSS1675 NC_006351.1 2300932 2301483 R Similar to Agrobacterium tumefaciens acetyltransferase atu3418 or agr_l_2808 SWALL:Q8UAF6 (EMBL:AE009272) (181 aa) fasta scores: E(): 1.4e-29, 52.22% id in 180 aa, and to Streptomyces coelicolor acetyltransferase sco3175 or sce87.26 SWALL:Q9RKB2 (EMBL:AL939115) (161 aa) fasta scores: E(): 2.7e-06, 32.39% id in 142 aa; acetyltransferase complement(2300932..2301483) Burkholderia pseudomallei K96243 3097037 YP_111681.1 CDS BPSS1676 NC_006351.1 2302418 2303440 R Similar to Agrobacterium tumefaciens hypothetical protein atu5238 or agr_pat_335 SWALL:Q8UK85 (EMBL:AE008946) (335 aa) fasta scores: E(): 2.1e-41, 40.92% id in 325 aa, and to Rhizobium meliloti hypothetical protein rb0421 or smb20435 SWALL:Q92WC2 (EMBL:AL603643) (331 aa) fasta scores: E(): 8.6e-39, 38.39% id in 323 aa; hypothetical protein complement(2302418..2303440) Burkholderia pseudomallei K96243 3097038 YP_111682.1 CDS BPSS1677 NC_006351.1 2304159 2304392 D Similar to Ralstonia solanacearum hypothetical protein rsp0793 or rs01914 SWALL:Q8XRN8 (EMBL:AL646080) (73 aa) fasta scores: E(): 1.4e-10, 53.84% id in 65 aa; hypothetical protein 2304159..2304392 Burkholderia pseudomallei K96243 3096976 YP_111683.1 CDS BPSS1678 NC_006351.1 2304652 2305575 D Similar to Ralstonia solanacearum ribonuclease RNAse BN rsp1664 or rs02223 SWALL:Q8XPH6 (EMBL:AL646086) (324 aa) fasta scores: E(): 3.3e-35, 38.54% id in 288 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribonuclease BN Rbn or b3886 or c4833 or z5425 or ecs4809 SWALL:RBN_ECOLI (SWALL:P32146) (290 aa) fasta scores: E(): 8.5e-07, 27.06% id in 303 aa; ribonuclease 2304652..2305575 Burkholderia pseudomallei K96243 3096670 YP_111684.1 CDS BPSS1679 NC_006351.1 2306033 2307187 D Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.7e-44, 44.33% id in 406 aa, and to Alcaligenes eutrophus hypothetical 40.6 kDa protein in gbd 3'region precursor SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 1.4e-36, 42.71% id in 391 aa; porin related exported protein 2306033..2307187 Burkholderia pseudomallei K96243 3096671 YP_111685.1 CDS BPSS1680 NC_006351.1 2309027 2309449 R Similar to Bordetella pertussis Bph2 SWALL:P94344 (EMBL:U82555) (145 aa) fasta scores: E(): 3.7e-26, 65.27% id in 144 aa, and to Xylella fastidiosa histone-like protein xf1943 SWALL:Q9PC42 (EMBL:AE004013) (130 aa) fasta scores: E(): 1.2e-18, 54.61% id in 130 aa; histone-like protein complement(2309027..2309449) Burkholderia pseudomallei K96243 3096774 YP_111686.1 CDS BPSS1681 NC_006351.1 2309745 2310872 D Similar to Bradyrhizobium japonicum protein blr2360 SWALL:BAC47625 (EMBL:AP005943) (393 aa) fasta scores: E(): 1.2e-44, 40.11% id in 359 aa, and to Rhizobium loti hypothetical protein mlr1941 SWALL:Q98JH3 (EMBL:AP002998) (388 aa) fasta scores: E(): 7.4e-19, 30.97% id in 381 aa; hypothetical protein 2309745..2310872 Burkholderia pseudomallei K96243 3096587 YP_111687.1 CDS gtaB NC_006351.1 2311424 2312311 R Similar to Bacillus subtilis UTP--glucose-1-phosphate uridylyltransferase GtaB SWALL:GTAB_BACSU (SWALL:Q05852) (292 aa) fasta scores: E(): 3.2e-52, 49.48% id in 289 aa, and to Burkholderia pseudomallei UTP-glucose-1-phosphate uridylyltransferase SWALL:Q9F5N4 (EMBL:AF312223) (295 aa) fasta scores: E(): 5.5e-114, 98.64% id in 295 aa; UTP-glucose-1-phosphate uridylyltransferase complement(2311424..2312311) Burkholderia pseudomallei K96243 3095010 YP_111688.1 CDS BPSS1683 NC_006351.1 2312964 2314121 D Similar to Pseudomonas aeruginosa hypothetical protein pa5458 SWALL:Q9HTB2 (EMBL:AE004958) (380 aa) fasta scores: E(): 2.1e-11, 28.83% id in 385 aa, and to Rhizobium loti exopolysaccharide biosynthesis protein mlr6758 SWALL:Q988F9 (EMBL:AP003010) (395 aa) fasta scores: E(): 2.5e-09, 27.69% id in 343 aa; lipopolysaccharide biosynthesis-related membrane protein 2312964..2314121 Burkholderia pseudomallei K96243 3096588 YP_111689.1 CDS BPSS1684 NC_006351.1 2314235 2316697 R Possible fusion protein. N-terminal region similar to Salmonella enterica first mannosyl transferase SWALL:Q00483 (EMBL:X61917) (385 aa) fasta scores: E(): 1.9e-82, 60.11% id in 361 aa, and C-terminal region to Agrobacterium tumefaciens glycosyltransferase atu3560 or agr_l_2541 SWALL:Q8UA15 (EMBL:AE009285) (382 aa) fasta scores: E(): 1.6e-41, 39.94% id in 383 aa. CDS is extended at the N-terminus in comparison to some similar proteins with matches in this region; lipopolysaccharide biosynthesys-related glycosyltransferase complement(2314235..2316697) Burkholderia pseudomallei K96243 3096455 YP_111690.1 CDS BPSS1685 NC_006351.1 2316694 2318160 R Similar to Shigella flexneri O-antigen transporter RfbE or sf2100 SWALL:RFBE_SHIFL (SWALL:P37781) (418 aa) fasta scores: E(): 1.5e-24, 26.17% id in 424 aa, and to Salmonella typhi O-antigen transporter RfbX or sty2297 SWALL:RFBX_SALTI (SWALL:Q99191) (432 aa) fasta scores: E(): 2.6e-05, 21.56% id in 422 aa; lipopolysaccharide biosynthesis related membrane protein complement(2316694..2318160) Burkholderia pseudomallei K96243 3096487 YP_111691.1 CDS BPSS1686 NC_006351.1 2318209 2320389 R Similar to Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 3.3e-39, 38.99% id in 695 aa, and to Anabaena sp. hypothetical protein all3696 SWALL:Q8YQW5 (EMBL:AP003594) (379 aa) fasta scores: E(): 2.6e-45, 38.03% id in 376 aa; hypothetical protein complement(2318209..2320389) Burkholderia pseudomallei K96243 3096488 YP_111692.1 CDS BPSS1687 NC_006351.1 2320944 2322002 D Similar to Rhizobium loti hypothetical protein mlr1941 SWALL:Q98JH3 (EMBL:AP002998) (388 aa) fasta scores: E(): 3.8e-18, 35.77% id in 355 aa, and to Corynebacterium glutamicum predicted acyltransferases cgl2858 SWALL:BAC00251 (EMBL:AP005283) (356 aa) fasta scores: E(): 1.2e-11, 29.73% id in 380 aa; hypothetical protein 2320944..2322002 Burkholderia pseudomallei K96243 3096186 YP_111693.1 CDS gca NC_006351.1 2322038 2323081 D Similar to Pseudomonas aeruginosa GDP-mannose 4,6-dehydratase Gca or pa5453 SWALL:GM4D_PSEAE (SWALL:Q51366) (323 aa) fasta scores: E(): 1.6e-62, 58.63% id in 336 aa, and to Xanthomonas campestris GDP-mannose 4,6-dehydratase Gmd SWALL:Q93S88 (EMBL:AF204145) (344 aa) fasta scores: E(): 2.8e-105, 76.09% id in 343 aa; GCP-mannose 4,6-dehydratase 2322038..2323081 Burkholderia pseudomallei K96243 3095272 YP_111694.1 CDS BPSS1689 NC_006351.1 2323068 2324036 D Similar to Xylella fastidiosa UDP-glucose 4-epimerase xf0610 SWALL:Q9PFP7 (EMBL:AE003906) (295 aa) fasta scores: E(): 9.9e-53, 53.71% id in 296 aa, and to Xanthomonas campestris UDP-glucose 4-epimerase Rmd or xcc0608 SWALL:AAM39924 (EMBL:AE012159) (312 aa) fasta scores: E(): 1.3e-49, 50.65% id in 304 aa; UDP-glucose 4-epimerase 2323068..2324036 Burkholderia pseudomallei K96243 3095577 YP_111695.1 CDS BPSS1690 NC_006351.1 2324021 2324401 R Similar to Pseudomonas aeruginosa hypothetical protein pa2490 SWALL:Q9I0Z2 (EMBL:AE004676) (124 aa) fasta scores: E(): 9.5e-16, 45.71% id in 105 aa, and to Xanthomonas axonopodis hypothetical protein xac0128 SWALL:AAM35020 (EMBL:AE011636) (123 aa) fasta scores: E(): 1.5e-15, 41.52% id in 118 aa; hypothetical protein complement(2324021..2324401) Burkholderia pseudomallei K96243 3095578 YP_111696.1 CDS metZ NC_006351.1 2324782 2325999 R catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase complement(2324782..2325999) Burkholderia pseudomallei K96243 3095378 YP_111697.1 CDS purF NC_006351.1 2326228 2327763 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(2326228..2327763) Burkholderia pseudomallei K96243 3095844 YP_111698.1 CDS BPSS1693 NC_006351.1 2327816 2328310 R Similar to Ralstonia solanacearum probable colicin V production transmembrane protein CvpA or rsc1977 or rs03551 SWALL:Q8XXY6 (EMBL:AL646067) (165 aa) fasta scores: E(): 1.7e-23, 45.34% id in 161 aa, and to Escherichia coli colicin V production protein CvpA or DedE or b2313 SWALL:CVPA_ECOLI (SWALL:P08550) (162 aa) fasta scores: E(): 1.4e-08, 35% id in 140 aa; bacteriocin production-like protein complement(2327816..2328310) Burkholderia pseudomallei K96243 3096577 YP_111699.1 CDS BPSS1694 NC_006351.1 2328317 2329057 R Similar to Ralstonia solanacearum probable transmembrane protein rsc1978 or rs03552 SWALL:Q8XXY5 (EMBL:AL646067) (273 aa) fasta scores: E(): 1.9e-08, 40.24% id in 241 aa, and to Salmonella typhimurium paral lipoprotein DedD or stm2364 SWALL:Q8ZNC1 (EMBL:AE008806) (224 aa) fasta scores: E(): 9e-05, 29.59% id in 223 aa; hypothetical protein complement(2328317..2329057) Burkholderia pseudomallei K96243 3095486 YP_111700.1 CDS folC NC_006351.1 2329162 2330475 R Similar to Escherichia coli folc bifunctional protein [includes: folylpolyglutamate synthase; dihydrofolate synthase] FolC or DedC or b2315 SWALL:FOLC_ECOLI (SWALL:P08192) (422 aa) fasta scores: E(): 2.1e-34, 43.02% id in 430 aa, and to Neisseria gonorrhoeae FolC protein SWALL:Q50990 (EMBL:Z68205) (424 aa) fasta scores: E(): 2.3e-74, 50.69% id in 434 aa; folylpolyglutamate synthase/dihydrofolate synthase complement(2329162..2330475) Burkholderia pseudomallei K96243 3095339 YP_111701.1 CDS accD NC_006351.1 2330587 2331459 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(2330587..2331459) Burkholderia pseudomallei K96243 3095672 YP_111702.1 CDS trpA NC_006351.1 2331539 2332354 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(2331539..2332354) Burkholderia pseudomallei K96243 3096324 YP_111703.1 CDS BPSS1698 NC_006351.1 2332398 2333246 R Similar to Rhodobacter sphaeroides modification methylase RsrIM SWALL:MTR1_RHOSH (SWALL:P14751) (319 aa) fasta scores: E(): 4.1e-25, 38.96% id in 231 aa, and to Bacillus subtilis modification methylase BglIIM SWALL:MTB2_BACSU (SWALL:Q45489) (360 aa) fasta scores: E(): 3.3e-22, 35.03% id in 254 aa; modification methylase complement(2332398..2333246) Burkholderia pseudomallei K96243 3095487 YP_111704.1 CDS trpB NC_006351.1 2333256 2334449 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(2333256..2334449) Burkholderia pseudomallei K96243 3096325 YP_111705.2 CDS trpF NC_006351.1 2334521 2335282 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(2334521..2335282) Burkholderia pseudomallei K96243 3096989 YP_111706.1 CDS truA NC_006351.1 2335282 2336097 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(2335282..2336097) Burkholderia pseudomallei K96243 3097109 YP_111707.1 CDS BPSS1702 NC_006351.1 2336094 2337227 R Poor database matches. Alanine rich low complexity protein. Possible C-terminal region of a pseudogene, Possible N-terminal region is BPSS17023; hypothetical protein complement(2336094..2337227) Burkholderia pseudomallei K96243 3095086 YP_111708.1 CDS BPSS1703 NC_006351.1 2337384 2338700 R Poor database matches. Alanine rich low complexity protein; hypothetical protein complement(2337384..2338700) Burkholderia pseudomallei K96243 3096958 YP_111709.1 CDS asd NC_006351.1 2338910 2340031 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(2338910..2340031) Burkholderia pseudomallei K96243 3097224 YP_111710.1 CDS leuB NC_006351.1 2340376 2341443 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(2340376..2341443) Burkholderia pseudomallei K96243 3094947 YP_111711.1 CDS leuD NC_006351.1 2341492 2342142 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(2341492..2342142) Burkholderia pseudomallei K96243 3095029 YP_111712.1 CDS BPSS1706a NC_006351.1 2342220 2342363 R Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri entericidin b precursor ecnb or b4147.2 or c5235 or z5754 or ecs5128.2 or sf4305 SWALL:ECNB_ECOLI (SWALL:P56549) (48 aa) fasta scores: E(): 0.55, 45.23% id in 42 aa; lipoprotein complement(2342220..2342363) Burkholderia pseudomallei K96243 3096959 YP_111713.1 CDS leuC NC_006351.1 2342366 2343775 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(2342366..2343775) Burkholderia pseudomallei K96243 3095020 YP_111714.1 CDS BPSS1708 NC_006351.1 2344167 2345462 R Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 5.5e-53, 40.04% id in 447 aa, and to Agrobacterium tumefaciens nitrilotriacetate monooxygenase atu3450 or agr_l_2756 SWALL:Q8UAC4 (EMBL:AE009275) (435 aa) fasta scores: E(): 1.7e-54, 37.23% id in 427 aa; nitrilotriacetate monooxygenase complement(2344167..2345462) Burkholderia pseudomallei K96243 3096964 YP_111715.1 CDS BPSS1709 NC_006351.1 2345455 2346402 R hypothetical protein complement(2345455..2346402) Burkholderia pseudomallei K96243 3096708 YP_111716.1 CDS BPSS1710 NC_006351.1 2347122 2347649 R Similar to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2.5e-45, 76.73% id in 159 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Shigella flexneri, and Enterobacter aerogenes leucine-responsive regulatory protein SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 8.8e-22, 41.44% id in 152 aa; transcription regulator AsnC complement(2347122..2347649) Burkholderia pseudomallei K96243 3096709 YP_111717.1 CDS aceE NC_006351.1 2347810 2350533 D paralogs to the E1 component of pyruvate dehydrogenase subunit E1; 2-oxoacid dehydrogenase subunit E1 2347810..2350533 Burkholderia pseudomallei K96243 3095727 YP_111718.1 CDS BPSS1712 NC_006351.1 2350787 2352031 R Similar to Yersinia pestis hypothetical protein ypo2976 or y1506 SWALL:Q8ZCK7 (EMBL:AJ414154) (415 aa) fasta scores: E(): 1.2e-95, 57.49% id in 407 aa, and to Escherichia coli hypothetical protein YbiU or b0821 SWALL:YBIU_ECOLI (SWALL:P75791) (421 aa) fasta scores: E(): 3.6e-70, 45.3% id in 415 aa; hypothetical protein complement(2350787..2352031) Burkholderia pseudomallei K96243 3096502 YP_111719.1 CDS BPSS1713 NC_006351.1 2352889 2353278 R Similar to Agrobacterium tumefaciens hypothetical protein atu4267 or agr_l_1189 SWALL:Q8U832 (EMBL:AE009355) (134 aa) fasta scores: E(): 4.7e-15, 43.65% id in 126 aa, and to Bradyrhizobium japonicum hypothetical protein blr0519 SWALL:BAC45784 (EMBL:AP005936) (128 aa) fasta scores: E(): 7.4e-14, 44.69% id in 132 aa; hypothetical protein complement(2352889..2353278) Burkholderia pseudomallei K96243 3096668 YP_111720.1 CDS BPSS1714 NC_006351.1 2353354 2354328 D Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4297 or agr_l_1135 SWALL:Q8U802 (EMBL:AE009358) (313 aa) fasta scores: E(): 4.8e-31, 39.72% id in 287 aa, and to Vibrio cholerae transcriptional regulator, AraC/XylS family vc1260 SWALL:Q9KSJ6 (EMBL:AE004205) (299 aa) fasta scores: E(): 3.8e-21, 30.36% id in 303 aa; AraC family transcriptional regulator 2353354..2354328 Burkholderia pseudomallei K96243 3096669 YP_111721.1 CDS gltA NC_006351.1 2354425 2355726 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(2354425..2355726) Burkholderia pseudomallei K96243 3096977 YP_111722.1 CDS BPSS1716 NC_006351.1 2355779 2356051 R Similar to Ralstonia solanacearum hypothetical protein rsc1992 or rs03560 SWALL:Q8XXX1 (EMBL:AL646067) (95 aa) fasta scores: E(): 4.3e-22, 70.78% id in 89 aa; hypothetical protein complement(2355779..2356051) Burkholderia pseudomallei K96243 3096676 YP_111723.1 CDS sdhB NC_006351.1 2356053 2356754 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(2356053..2356754) Burkholderia pseudomallei K96243 3095873 YP_111724.1 CDS sdhA NC_006351.1 2356776 2358551 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(2356776..2358551) Burkholderia pseudomallei K96243 3095867 YP_111725.1 CDS BPSS1719 NC_006351.1 2358556 2358924 R Similar to Ralstonia solanacearum transmembrane succinate dehydrogenase sdhd or rsc1995 or rs03563 SWALL:Q8XXW8 (EMBL:AL646067) (121 aa) fasta scores: E(): 1.2e-35, 71.31% id in 122 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri succinate dehydrogenase hydrophobic membrane anchor protein sdhd or b0722 or c0800 or sf0575 SWALL:DHSD_ECOLI (SWALL:P10445) (115 aa) fasta scores: E(): 1.7e-10, 32.69% id in 104 aa; succinate dehydrogenase complement(2358556..2358924) Burkholderia pseudomallei K96243 3096506 YP_111726.1 CDS BPSS1720 NC_006351.1 2358929 2359345 R Similar to Ralstonia solanacearum transmembrane succinate dehydrogenase SdhC or rsc1996 or rs03564 SWALL:Q8XXW7 (EMBL:AL646067) (140 aa) fasta scores: E(): 1.1e-30, 58.69% id in 138 aa, and to Escherichia coli, and Escherichia coli O157:H7 succinate dehydrogenase cytochrome b-556 subunit SdhC or CybA or b0721 or z0875 or ecs0746 SWALL:DHSC_ECOLI (SWALL:P10446) (129 aa) fasta scores: E(): 7.3e-11, 35.15% id in 128 aa; succinate dehydrogenase cytochrome b-556 subunit complement(2358929..2359345) Burkholderia pseudomallei K96243 3096507 YP_111727.1 CDS BPSS1721 NC_006351.1 2359545 2360345 R Similar to Ralstonia solanacearum probable transcription regulator protein rsc1997 or rs03565 SWALL:Q8XXW6 (EMBL:AL646067) (274 aa) fasta scores: E(): 4.4e-67, 67.66% id in 266 aa, and to Escherichia coli hypothetical transcriptional regulator YhfR or b3375 SWALL:YHFR_ECOLI (SWALL:P45544) (243 aa) fasta scores: E(): 5.6e-14, 29.49% id in 217 aa; GntR family transcriptional regulator complement(2359545..2360345) Burkholderia pseudomallei K96243 3097204 YP_111728.1 CDS mdh NC_006351.1 2360644 2361627 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 2360644..2361627 Burkholderia pseudomallei K96243 3095126 YP_111729.1 CDS BPSS1723 NC_006351.1 2361825 2362844 D Similar to Ralstonia solanacearum probable lyase rsc1999 or rs03567 SWALL:Q8XXW4 (EMBL:AL646067) (320 aa) fasta scores: E(): 8.8e-69, 58.17% id in 318 aa, and to Leptospira interrogans citrate lyase, beta subunit CitE or la2841 SWALL:AAN50040 (EMBL:AE011449) (342 aa) fasta scores: E(): 7.8e-59, 47.48% id in 318 aa; lyase 2361825..2362844 Burkholderia pseudomallei K96243 3096700 YP_111730.1 CDS BPSS1724 NC_006351.1 2363001 2363510 D Similar to Ralstonia solanacearum probable signal peptide protein rsc2001 or rs03569 SWALL:Q8XXW2 (EMBL:AL646067) (185 aa) fasta scores: E(): 6.9e-20, 49.41% id in 170 aa; hypothetical protein 2363001..2363510 Burkholderia pseudomallei K96243 3096701 YP_111731.1 CDS prpD NC_006351.1 2363587 2365038 D functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 2363587..2365038 Burkholderia pseudomallei K96243 3095704 YP_111732.1 CDS acnA NC_006351.1 2365086 2367803 D catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2365086..2367803 Burkholderia pseudomallei K96243 3096598 YP_111733.1 CDS BPSS1727 NC_006351.1 2368050 2370776 R Similar to the N-terminal region of Bordetella pertussis filamentous hemagglutinin FhaB SWALL:FHAB_BORPE (SWALL:P12255) (3591 aa) fasta scores: E(): 7e-34, 29.76% id in 897 aa, and to Bordetella pertussis Fha protein FhaB2 SWALL:Q8VV99 (EMBL:AJ420989) (3590 aa) fasta scores: E(): 7e-34, 29.76% id in 897 aa; hemagglutinin-like protein complement(2368050..2370776) Burkholderia pseudomallei K96243 3097063 YP_111734.1 CDS BPSS1728 NC_006351.1 2370877 2372568 R Similar to Proteus mirabilis hemolysin activator protein precursor HpmB SWALL:HLYB_PROMI (SWALL:P16465) (561 aa) fasta scores: E(): 2.6e-21, 25.86% id in 549 aa, and to Bordetella pertussis hemolysin activator-like protein FhaC precursor SWALL:FHAC_BORPE (SWALL:P35077) (584 aa) fasta scores: E(): 1.9e-53, 33.15% id in 567 aa; secretion/activator protein complement(2370877..2372568) Burkholderia pseudomallei K96243 3095194 YP_111735.1 CDS BPSS1729 NC_006351.1 2373847 2375931 R Similar to Pseudomonas aeruginosa probable cytochrome C pa4571 SWALL:Q9HVL3 (EMBL:AE004870) (675 aa) fasta scores: E(): 1.6e-102, 64.84% id in 694 aa, and to Acetobacter polyoxogenes, and Acetobacter europaeus alcohol dehydrogenase cytochrome C subunit precursor AdhB SWALL:CYCA_ACEPO (SWALL:Q03318) (468 aa) fasta scores: E(): 4.8e-59, 42.85% id in 413 aa; cytochrome C complement(2373847..2375931) Burkholderia pseudomallei K96243 3095041 YP_111736.1 CDS BPSS1730 NC_006351.1 2376418 2376789 R Similar to Ralstonia solanacearum probable transmembrane protein rsp0612 or rs03755 SWALL:Q8XS69 (EMBL:AL646079) (122 aa) fasta scores: E(): 7.3e-28, 67.76% id in 121 aa, and to Pseudomonas aeruginosa hypothetical protein pa3386 SWALL:Q9HYL6 (EMBL:AE004760) (121 aa) fasta scores: E(): 0.0026, 35% id in 120 aa; hypothetical protein complement(2376418..2376789) Burkholderia pseudomallei K96243 3094942 YP_111737.1 CDS BPSS1731 NC_006351.1 2377103 2378716 R Similar to Aspergillus oryzae tyrosinase MelO SWALL:TYRO_ASPOR (SWALL:Q00234) (539 aa) fasta scores: E(): 4.6e-35, 41.49% id in 535 aa, and to Agaricus bisporus tyrosinase Ppo2 SWALL:TYRO_AGABI (SWALL:O42713) (556 aa) fasta scores: E(): 2.1e-05, 28.1% id in 395 aa; pigment biosynthesis-related tyrosinase complement(2377103..2378716) Burkholderia pseudomallei K96243 3094943 YP_111738.1 CDS BPSS1732 NC_006351.1 2379008 2379637 R hypothetical protein complement(2379008..2379637) Burkholderia pseudomallei K96243 3095058 YP_111739.1 CDS BPSS1733 NC_006351.1 2380632 2380766 D Similar to Ralstonia solanacearum transmembrane protein rsp1646 or rs02205 SWALL:Q8XPJ4 (EMBL:AL646086) (44 aa) fasta scores: E(): 5.2e-12, 68.18% id in 44 aa; hypothetical protein 2380632..2380766 Burkholderia pseudomallei K96243 3095120 YP_111740.1 CDS BPSS1734 NC_006351.1 2381113 2382861 D Similar to Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 1.1e-143, 67.53% id in 579 aa, and to Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 4.4e-33, 43.66% id in 616 aa; sedolisin 2381113..2382861 Burkholderia pseudomallei K96243 3095121 YP_111741.1 CDS BPSS1735 NC_006351.1 2382956 2383795 R Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1731 or rs02919 SWALL:Q8XYM7 (EMBL:AL646066) (272 aa) fasta scores: E(): 4.3e-87, 86.76% id in 272 aa, and to Yersinia pestis ABC transporter permease ypo2841 SWALL:Q8ZCW7 (EMBL:AJ414154) (282 aa) fasta scores: E(): 7.7e-54, 56.56% id in 274 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; ABC transporter membrane protein complement(2382956..2383795) Burkholderia pseudomallei K96243 3095267 YP_111742.1 CDS BPSS1736 NC_006351.1 2383826 2385094 R Similar to Ralstonia solanacearum probable transport system permease transmembrane protein rsc1732 or rs02920 SWALL:Q8XYM6 (EMBL:AL646066) (420 aa) fasta scores: E(): 1.2e-125, 80.52% id in 416 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0605 SWALL:Q9I5T3 (EMBL:AE004497) (415 aa) fasta scores: E(): 8.9e-92, 59.33% id in 423 aa; ABC transporter membrane protein complement(2383826..2385094) Burkholderia pseudomallei K96243 3095980 YP_111743.1 CDS BPSS1737 NC_006351.1 2385186 2386232 R Similar to Ralstonia solanacearum lipoprotein signal peptide rsc1733 or rs02921 SWALL:Q8XYM5 (EMBL:AL646066) (346 aa) fasta scores: E(): 2.4e-116, 86.09% id in 338 aa, and to Pseudomonas putida polyamine ABC transporter periplasmic polyamine-binding protein pp0412 SWALL:AAN66042 (EMBL:AE016775) (344 aa) fasta scores: E(): 2.2e-84, 62.09% id in 343 aa; ABC transporter exported protein complement(2385186..2386232) Burkholderia pseudomallei K96243 3095981 YP_111744.1 CDS BPSS1738 NC_006351.1 2386307 2387407 R Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1734 or rs02922 SWALL:Q8XYM4 (EMBL:AL646066) (363 aa) fasta scores: E(): 1.8e-102, 80.82% id in 365 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa0603 SWALL:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 2e-69, 59.94% id in 362 aa; ABC transport system ATP-binding protein complement(2386307..2387407) Burkholderia pseudomallei K96243 3095673 YP_111745.1 CDS BPSS1739 NC_006351.1 2387516 2389045 D Similar to Ralstonia solanacearum transcription regulator protein rsc0030 or rs01853 SWALL:Q8Y3F0 (EMBL:AL646057) (509 aa) fasta scores: E(): 2e-107, 57.08% id in 501 aa, and to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 6.7e-52, 38.54% id in 480 aa; GntR family transcriptional regulator 2387516..2389045 Burkholderia pseudomallei K96243 3097070 YP_111746.1 CDS lipB NC_006351.1 2389152 2390186 R acts as a molecular chaperone to fold and export lipase A; lipase chaperone complement(2389152..2390186) Burkholderia pseudomallei K96243 3095162 YP_111747.1 CDS lipA1 NC_006351.1 2390190 2391284 R Similar to Burkholderia cepacia lipase precursor LipA SWALL:LIP_BURCE (SWALL:P22088) (364 aa) fasta scores: E(): 7.1e-111, 84.34% id in 364 aa, and to Pseudomonas sp. Lipase precursor Lip SWALL:LIP_PSES5 (SWALL:P25275) (364 aa) fasta scores: E(): 4.2e-110, 83.79% id in 364 aa; lipase precursor complement(2390190..2391284) Burkholderia pseudomallei K96243 3095030 YP_111748.1 CDS BPSS1742 NC_006351.1 2391608 2393857 R Similar to Pseudomonas putida outer membrane copper receptor OprC or pp4838 SWALL:AAN70407 (EMBL:AE016792) (688 aa) fasta scores: E(): 5.8e-81, 59.23% id in 655 aa, and to Pseudomonas stutzeri outer membrane protein NosA SWALL:Q8KLV2 (EMBL:AJ507426) (719 aa) fasta scores: E(): 9e-71, 49.48% id in 675 aa; outer membrane copper receptor complement(2391608..2393857) Burkholderia pseudomallei K96243 3097071 YP_111749.1 CDS BPSS1743 NC_006351.1 2393945 2394340 R hypothetical protein complement(2393945..2394340) Burkholderia pseudomallei K96243 3097168 YP_111750.1 CDS BPSS1744 NC_006351.1 2394501 2395037 R Similar to Escherichia coli, and Shigella flexneri cytochrome b561 CybB or b1418 or sf1794 SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 5e-16, 34.7% id in 170 aa, and to Pseudomonas aeruginosa cytochrome b561 pa0918 SWALL:Q9I539 (EMBL:AE004526) (182 aa) fasta scores: E(): 1.9e-22, 41.86% id in 172 aa; cytochrome b561 complement(2394501..2395037) Burkholderia pseudomallei K96243 3097263 YP_111751.1 CDS BPSS1745 NC_006351.1 2395306 2395941 D Similar to Caulobacter crescentus hypothetical protein cc3427 SWALL:Q9A2X9 (EMBL:AE006002) (218 aa) fasta scores: E(): 4.5e-10, 35.36% id in 164 aa, and to Streptomyces coelicolor integral membrane regulator sco3583 or sch66.04 SWALL:Q9X936 (EMBL:AL939117) (254 aa) fasta scores: E(): 8.3e-08, 33.33% id in 219 aa; hypothetical protein 2395306..2395941 Burkholderia pseudomallei K96243 3097264 YP_111752.1 CDS BPSS1746 NC_006351.1 2396072 2396836 R Similar to Coxiella burnetii lipoprotein precursor NlpD SWALL:Q9KI20 (EMBL:AF244357) (230 aa) fasta scores: E(): 9e-17, 37.91% id in 240 aa, and to Pseudomonas aeruginosa lipoprotein NlpD/LppB homolog precursor pa3623 SWALL:NLPD_PSEAE (SWALL:P45682) (297 aa) fasta scores: E(): 6.8e-14, 36.53% id in 271 aa; lipoprotein complement(2396072..2396836) Burkholderia pseudomallei K96243 3097222 YP_111753.1 CDS BPSS1747 NC_006351.1 2397116 2397433 R Similar to Neisseria meningitidis hypothetical protein nma0001 SWALL:Q9JX93 (EMBL:AL162752) (106 aa) fasta scores: E(): 1.1e-27, 68.62% id in 102 aa, and to Pseudomonas aeruginosa hypothetical protein pa2490 SWALL:Q9I0Z2 (EMBL:AE004676) (124 aa) fasta scores: E(): 0.00015, 31.19% id in 109 aa; hypothetical protein complement(2397116..2397433) Burkholderia pseudomallei K96243 3095783 YP_111754.1 CDS BPSS1748 NC_006351.1 2397872 2398204 R hypothetical protein complement(2397872..2398204) Burkholderia pseudomallei K96243 3095784 YP_111755.1 CDS gnd NC_006351.1 2398403 2399818 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(2398403..2399818) Burkholderia pseudomallei K96243 3097024 YP_111756.1 CDS BPSS1750 NC_006351.1 2400273 2400887 R Similar to Anabaena sp. hypothetical protein all0385 SWALL:Q8YZS2 (EMBL:AP003582) (210 aa) fasta scores: E(): 7e-37, 51.72% id in 203 aa, and to Synechocystis sp. hypothetical protein slr0065 SWALL:Q55157 (EMBL:D64001) (212 aa) fasta scores: E(): 2.1e-35, 49.75% id in 201 aa; hypothetical protein complement(2400273..2400887) Burkholderia pseudomallei K96243 3097194 YP_111757.1 CDS BPSS1751 NC_006351.1 2400913 2401851 R Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase complement(2400913..2401851) Burkholderia pseudomallei K96243 3096048 YP_111758.1 CDS BPSS1752 NC_006351.1 2401848 2403272 R Similar to Pseudomonas aeruginosa probable transporter pa5099 SWALL:Q9HU84 (EMBL:AE004922) (480 aa) fasta scores: E(): 2.1e-121, 67.79% id in 472 aa, and to Bacillus subtilis homologous to purine-cytosine permease YxlA SWALL:P94369 (EMBL:D83026) (457 aa) fasta scores: E(): 2.8e-59, 39.47% id in 461 aa; transport-related, membrane protein complement(2401848..2403272) Burkholderia pseudomallei K96243 3096049 YP_111759.1 CDS BPSS1753 NC_006351.1 2403909 2404769 D hypothetical protein 2403909..2404769 Burkholderia pseudomallei K96243 3096059 YP_111760.1 CDS BPSS1754 NC_006351.1 2404833 2405999 D Similar to Methanosarcina mazei conserved protein mm0534 SWALL:AAM30230 (EMBL:AE013279) (391 aa) fasta scores: E(): 1.2e-23, 27.13% id in 387 aa, and to Rhizobium loti hypothetical protein mll7337 SWALL:Q986I8 (EMBL:AP003011) (398 aa) fasta scores: E(): 5.6e-22, 35.05% id in 388 aa. Possible alternative translational start site; hypothetical protein 2404833..2405999 Burkholderia pseudomallei K96243 3096686 YP_111761.1 CDS BPSS1755 NC_006351.1 2406884 2408926 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(2406884..2408926) Burkholderia pseudomallei K96243 3096687 YP_111762.1 CDS dnaG NC_006351.1 2409370 2411244 R synthesizes RNA primers at the replication forks; DNA primase complement(2409370..2411244) Burkholderia pseudomallei K96243 3096768 YP_111763.1 CDS BPSS1757 NC_006351.1 2411338 2411784 R Similar to Ralstonia solanacearum hypothetical protein rsc2217 or rs01382 SWALL:Q8XX99 (EMBL:AL646068) (149 aa) fasta scores: E(): 1.9e-33, 77.55% id in 147 aa, and to Bacillus subtilis hypothetical protein YqeY SWALL:YQEY_BACSU (SWALL:P54464) (148 aa) fasta scores: E(): 9.7e-14, 37.16% id in 148 aa; hypothetical protein complement(2411338..2411784) Burkholderia pseudomallei K96243 3096576 YP_111764.1 CDS rpsU NC_006351.1 2411951 2412163 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(2411951..2412163) Burkholderia pseudomallei K96243 3095644 YP_111765.1 CDS BPSS1759 NC_006351.1 2412243 2413466 R Similar to Rhizobium meliloti hypothetical protein r00707 or smc00763 SWALL:Q92RY0 (EMBL:AL591784) (394 aa) fasta scores: E(): 2.8e-77, 55.16% id in 397 aa, and to Escherichia coli hypothetical protein YhiN or b3492 SWALL:YHIN_ECOLI (SWALL:P37631) (400 aa) fasta scores: E(): 1.2e-68, 48.47% id in 394 aa; hypothetical protein complement(2412243..2413466) Burkholderia pseudomallei K96243 3095896 YP_111766.1 CDS gcp NC_006351.1 2413606 2414646 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 2413606..2414646 Burkholderia pseudomallei K96243 3095273 YP_111767.1 CDS BPSS1761 NC_006351.1 2415068 2415877 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase complement(2415068..2415877) Burkholderia pseudomallei K96243 3095897 YP_111768.1 CDS dxs NC_006351.1 2416028 2417932 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2416028..2417932) Burkholderia pseudomallei K96243 3096803 YP_111769.1 CDS ispA NC_006351.1 2418016 2418900 R Similar to Escherichia coli geranyltranstransferase IspA or b0421 SWALL:ISPA_ECOLI (SWALL:P22939) (299 aa) fasta scores: E(): 6.8e-41, 45.97% id in 298 aa, and to Salmonella typhi geranyltranstransferase sty0462 SWALL:Q8Z8X2 (EMBL:AL627266) (299 aa) fasta scores: E(): 1.5e-42, 46.98% id in 298 aa; geranyltranstransferase complement(2418016..2418900) Burkholderia pseudomallei K96243 3095022 YP_111770.1 CDS xseB NC_006351.1 2418897 2419190 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(2418897..2419190) Burkholderia pseudomallei K96243 3096525 YP_111771.1 CDS BPSS1765 NC_006351.1 2419460 2420566 D Similar to the eukaryotic Beta vulgaris choline monooxygenase, chloroplast precursor Cmo SWALL:CHMO_BETVU (SWALL:O22553) (446 aa) fasta scores: E(): 6e-12, 25.75% id in 365 aa, and to Ralstonia solanacearum probable dioxygenase rsc2224 or rs01375 SWALL:Q8XX92 (EMBL:AL646068) (365 aa) fasta scores: E(): 2e-115, 73.55% id in 363 aa; osmotic adaptation-related protein 2419460..2420566 Burkholderia pseudomallei K96243 3096723 YP_111772.1 CDS BPSS1766 NC_006351.1 2420714 2421583 D Similar to Escherichia coli 3-mercaptopyruvate sulfurtransferase SseA or b2521 SWALL:THTM_ECOLI (SWALL:P31142) (280 aa) fasta scores: E(): 3.6e-21, 33.09% id in 284 aa, and to Pseudomonas aeruginosa probable 3-mercaptopyruvate sulfurtransferase pa1292 SWALL:THTM_PSEAE (SWALL:Q9I452) (284 aa) fasta scores: E(): 1.5e-49, 50.17% id in 281 aa; sulfurtransferase (cyanide detoxification) 2420714..2421583 Burkholderia pseudomallei K96243 3096362 YP_111773.1 CDS BPSS1767 NC_006351.1 2421642 2422517 R Similar to Pseudomonas putida, and Pseudomonas sp. carboxymethylenebutenolidase ClcD SWALL:CLCD_PSEPU (SWALL:P11453) (236 aa) fasta scores: E(): 4e-07, 28.07% id in 228 aa, and to Escherichia coli carboxymethylenebutenolidase YsgA or b3830 SWALL:DLHH_ECOLI (SWALL:P56262) (271 aa) fasta scores: E(): 3.6e-52, 52.65% id in 264 aa; carboxymethylenebutenolidase complement(2421642..2422517) Burkholderia pseudomallei K96243 3096363 YP_111774.1 CDS BPSS1768 NC_006351.1 2423237 2425030 D Similar to Ralstonia solanacearum probable transmembrane protein rsp1080 or rs02587 SWALL:Q8XQY8 (EMBL:AL646082) (541 aa) fasta scores: E(): 1.6e-38, 33.68% id in 576 aa, and to Rhizobium loti hypothetical protein mll7595 SWALL:Q985N8 (EMBL:AP003012) (589 aa) fasta scores: E(): 1.4e-28, 28.31% id in 611 aa; hypothetical protein 2423237..2425030 Burkholderia pseudomallei K96243 3096026 YP_111775.1 CDS ndh NC_006351.1 2425270 2426652 R Similar to Escherichia coli NADH dehydrogenase Ndh or b1109 SWALL:DHNA_ECOLI (SWALL:P00393) (433 aa) fasta scores: E(): 9.1e-23, 45.43% id in 460 aa, and to Ralstonia solanacearum probable NADH dehydrogenase, membrane flavoprotein FAD NAD ubiquinone electron transport oxidoreductase Ndh or rsc2229 or rs01370 SWALL:Q8XX87 (EMBL:AL646069) (441 aa) fasta scores: E(): 3.1e-68, 62.66% id in 458 aa; NADH dehydrogenase complement(2425270..2426652) Burkholderia pseudomallei K96243 3097258 YP_111776.1 CDS polA NC_006351.1 2426971 2429742 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(2426971..2429742) Burkholderia pseudomallei K96243 3095629 YP_111777.1 CDS BPSS1771 NC_006351.1 2429831 2430493 D Similar to Neisseria meningitidis hypothetical protein nma2204 SWALL:Q9JSP2 (EMBL:AL162758) (210 aa) fasta scores: E(): 2.9e-35, 54.77% id in 199 aa, and to Corynebacterium glutamicum predicted Rossmann fold nucleotide-binding protein cgl1110 SWALL:BAB98503 (EMBL:AP005277) (256 aa) fasta scores: E(): 2.6e-34, 48.46% id in 196 aa; decarboxylase 2429831..2430493 Burkholderia pseudomallei K96243 3096490 YP_111778.1 CDS BPSS1772 NC_006351.1 2430911 2431195 D Similar to Ralstonia solanacearum probable signal peptide protein rsp0708 or rs01741 SWALL:Q8XRX3 (EMBL:AL646080) (106 aa) fasta scores: E(): 4.1e-05, 42.04% id in 88 aa, and to Bordetella pertussis Vrg-6 SWALL:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 0.14, 40.59% id in 101 aa; hypothetical protein 2430911..2431195 Burkholderia pseudomallei K96243 3096491 YP_111779.1 CDS BPSS1773 NC_006351.1 2431845 2432336 D Similar to Rhizobium meliloti hypothetical protein r00856 or smc00850 SWALL:Q92RL1 (EMBL:AL591785) (172 aa) fasta scores: E(): 4.6e-28, 53.12% id in 160 aa, and to Ralstonia solanacearum hypothetical protein rsc1374 or rs04657 SWALL:Q8XZM1 (EMBL:AL646064) (173 aa) fasta scores: E(): 3.2e-26, 50.62% id in 160 aa; hypothetical protein 2431845..2432336 Burkholderia pseudomallei K96243 3096086 YP_111780.1 CDS BPSS1774 NC_006351.1 2433214 2434440 R hypothetical protein complement(2433214..2434440) Burkholderia pseudomallei K96243 3096649 YP_111781.1 CDS amn NC_006351.1 2436429 2437955 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(2436429..2437955) Burkholderia pseudomallei K96243 3095963 YP_111782.1 CDS BPSS1778 NC_006351.1 2438111 2438509 D Similar to Ralstonia solanacearum transmembrane protein rsc2232 or rs01367 SWALL:Q8XX84 (EMBL:AL646069) (139 aa) fasta scores: E(): 4.8e-07, 38.06% id in 134 aa; hypothetical protein 2438111..2438509 Burkholderia pseudomallei K96243 3096631 YP_111783.1 CDS thrB NC_006351.1 2438603 2439598 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 2438603..2439598 Burkholderia pseudomallei K96243 3096847 YP_111784.1 CDS BPSS1780 NC_006351.1 2439589 2440401 D Similar to Ralstonia solanacearum probable transmembrane protein rsc2234 or rs01365 SWALL:Q8XX82 (EMBL:AL646069) (265 aa) fasta scores: E(): 2e-41, 45.92% id in 270 aa; hypothetical protein 2439589..2440401 Burkholderia pseudomallei K96243 3097056 YP_111785.1 CDS BPSS1781 NC_006351.1 2440904 2441356 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2849 SWALL:Q9HZZ4 (EMBL:AE004711) (151 aa) fasta scores: E(): 1.8e-24, 53.24% id in 154 aa, and to Brucella suis transcriptional regulator, MarR family bra0886 SWALL:AAN34058 (EMBL:AE014582) (151 aa) fasta scores: E(): 1.7e-23, 52.02% id in 148 aa; MarR family transcriptional regulator 2440904..2441356 Burkholderia pseudomallei K96243 3096256 YP_111786.1 CDS ohr NC_006351.1 2441494 2441913 D Similar to Xanthomonas axonopodis organic hydroperoxide resistance protein Ohr or xac0282 SWALL:OHR_XANAC (SWALL:O68390) (142 aa) fasta scores: E(): 2.1e-31, 62.04% id in 137 aa, and to Pseudomonas putida organic hydroperoxide resistance protein Ohr or pp1859 SWALL:AAN67478 (EMBL:AE016780) (142 aa) fasta scores: E(): 1.5e-33, 67.4% id in 135 aa; organic hydroperoxide resistance protein 2441494..2441913 Burkholderia pseudomallei K96243 3097161 YP_111787.1 CDS BPSS1783 NC_006351.1 2442026 2442184 R hypothetical protein complement(2442026..2442184) Burkholderia pseudomallei K96243 3096257 YP_111788.1 CDS BPSS1784 NC_006351.1 2442281 2443327 R Similar to Rhizobium loti polyhydroxybutyrate depolymerase mlr2444 SWALL:Q98IE0 (EMBL:AP002999) (371 aa) fasta scores: E(): 1.5e-18, 30.4% id in 296 aa, and to Pseudomonas lemoignei poly(3-hydroxyalkanoate) depolymerase C precursor PhaZ1 SWALL:PHA1_PSELE (SWALL:P52090) (414 aa) fasta scores: E(): 1.4e-15, 30.23% id in 258 aa; depolymerase complement(2442281..2443327) Burkholderia pseudomallei K96243 3096172 YP_111789.1 CDS BPSS1785 NC_006351.1 2443689 2444378 D Similar to Aeromonas hydrophila hypothetical 28.2 kDa protein SWALL:Q9X647 (EMBL:AF131869) (264 aa) fasta scores: E(): 2e-19, 36.12% id in 227 aa, and to Klebsiella pneumoniae hypothetical 22.5 kDa protein in cps region SWALL:YC02_KLEPN (SWALL:Q48448) (209 aa) fasta scores: E(): 2.5e-14, 32.16% id in 199 aa; hypothetical protein 2443689..2444378 Burkholderia pseudomallei K96243 3096771 YP_111790.1 CDS BPSS1786 NC_006351.1 2444947 2445747 D Similar to Ralstonia solanacearum molybdate-binding periplasmic signal peptide protein rsp0106 or rs06057 SWALL:Q8XTK2 (EMBL:AL646076) (257 aa) fasta scores: E(): 9.3e-52, 62.64% id in 257 aa, and to Methanosarcina acetivorans molybdenum ABC transporter solute-binding protein ma2280 SWALL:Q8TNK5 (EMBL:AE010915) (274 aa) fasta scores: E(): 5.8e-35, 48.3% id in 236 aa, and to Escherichia coli molybdate-binding periplasmic protein precursor ModA or b0763 SWALL:MODA_ECOLI (SWALL:P37329) (257 aa) fasta scores: E(): 1.2e-20, 36.11% id in 252 aa; molybdenum transport-related, exported protein 2444947..2445747 Burkholderia pseudomallei K96243 3096772 YP_111791.1 CDS BPSS1787 NC_006351.1 2445760 2446434 D Similar to Methanosarcina acetivorans molybdenum ABC transporter permease ModB or ma2281 SWALL:Q8TNK4 (EMBL:AE010915) (225 aa) fasta scores: E(): 3.1e-35, 48.83% id in 215 aa, and to Escherichia coli, and Escherichia coli O157:H7 molybdenum transport system permease ModB or ChlJ or b0764 or z0934 or ecs0792 SWALL:MODB_ECOLI (SWALL:P09834) (229 aa) fasta scores: E(): 6e-31, 45% id in 220 aa; molybdenum transport-related membrane protein 2445760..2446434 Burkholderia pseudomallei K96243 3095605 YP_111792.1 CDS BPSS1788 NC_006351.1 2446436 2447137 D Similar to Methanosarcina acetivorans molydbenum ABC transporter ATP-binding protein ModC or ma2282 SWALL:Q8TNK3 (EMBL:AE010915) (383 aa) fasta scores: E(): 1.7e-27, 44.15% id in 231 aa, and to Mycobacterium tuberculosis molybdenum transport ATP-binding protein ModC or rv1859 or mt1907 or mtcy359.14 SWALL:MODC_MYCTU (SWALL:P95155) (369 aa) fasta scores: E(): 2.9e-23, 43.77% id in 217 aa; molybdenum transport-related, ATP-binding protein 2446436..2447137 Burkholderia pseudomallei K96243 3096898 YP_111793.1 CDS modE NC_006351.1 2447680 2448468 R Similar to Azotobacter vinelandii molybdenum transport protein ModE or ModA SWALL:MODE_AZOVI (SWALL:P37733) (270 aa) fasta scores: E(): 2.2e-34, 50.6% id in 249 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri transcriptional regulator ModE or ModR or b0761 or z0931 or ecs0789 or sf0543 SWALL:MODE_ECOLI (SWALL:P46930) (262 aa) fasta scores: E(): 2.2e-23, 40.16% id in 244 aa; molybdenum transport protein complement(2447680..2448468) Burkholderia pseudomallei K96243 3096486 YP_111794.1 CDS BPSS1790 NC_006351.1 2448563 2450620 R C-terminal region is similar to Caulobacter crescentus hypothetical protein cc3522 SWALL:Q9A2N4 (EMBL:AE006010) (509 aa) fasta scores: E(): 1.1e-13, 31.79% id in 519 aa, and to Rhizobium loti hypothetical protein mll9114 SWALL:Q982E5 (EMBL:AP003015) (500 aa) fasta scores: E(): 0.00016, 28.97% id in 421 aa; hypothetical protein complement(2448563..2450620) Burkholderia pseudomallei K96243 3096899 YP_111795.1 CDS BPSS1791 NC_006351.1 2450683 2451066 R Similar to Streptomyces coelicolor hypothetical protein sco1037 or scg20a.17 SWALL:Q9K3M3 (EMBL:AL939107) (133 aa) fasta scores: E(): 4.5e-12, 40.62% id in 128 aa, and to Bacillus subtilis hypothetical protein YrdN SWALL:YRDN_BACSU (SWALL:P94502) (129 aa) fasta scores: E(): 4.6e-11, 34.64% id in 127 aa; hypothetical protein complement(2450683..2451066) Burkholderia pseudomallei K96243 3095357 YP_111796.1 CDS BPSS1792 NC_006351.1 2451164 2452039 D Similar to Erwinia chrysanthemi pectinase gene transcriptional regulator PecT SWALL:PECT_ERWCH (SWALL:P52662) (316 aa) fasta scores: E(): 1e-16, 33.84% id in 260 aa, to Agrobacterium tumefaciens transcriptional regulator, LysR family HexA or atu3987 or agr_l_1733 SWALL:Q8U8V1 (EMBL:AE009329) (293 aa) fasta scores: E(): 1.1e-42, 49.64% id in 278 aa, and to Rhizobium loti transcriptional regulator mlr5687 SWALL:Q98B84 (EMBL:AP003007) (302 aa) fasta scores: E(): 3.9e-38, 47.42% id in 272 aa; LysR family transcriptional regulator 2451164..2452039 Burkholderia pseudomallei K96243 3096139 YP_111797.1 CDS BPSS1793 NC_006351.1 2452106 2453026 D Similar to Clostridium acetobutylicum predicted permease cac0076 SWALL:Q97MW5 (EMBL:AE007520) (303 aa) fasta scores: E(): 2e-43, 41.05% id in 285 aa, and to Brucella suis membrane protein, br1507 SWALL:AAN30418 (EMBL:AE014445) (303 aa) fasta scores: E(): 2.1e-30, 35.78% id in 299 aa; hypothetical protein 2452106..2453026 Burkholderia pseudomallei K96243 3096140 YP_111798.1 CDS BPSS1794 NC_006351.1 2453119 2453898 D Similar to parts of Ralstonia solanacearum probable composite two-component regulatory rsp1676 or rs02235 SWALL:Q8XPG5 (EMBL:AL646086) (796 aa) fasta scores: E(): 1e-19, 34.13% id in 249 aa, and of Anabaena sp. two-component hybrid sensor and regulator alr3442 SWALL:Q8YRK4 (EMBL:AP003593) (865 aa) fasta scores: E(): 3.8e-13, 29.43% id in 248 aa; hypothetical protein 2453119..2453898 Burkholderia pseudomallei K96243 3097193 YP_111799.1 CDS BPSS1795 NC_006351.1 2453984 2455324 D Similar to Pseudomonas aeruginosa hypothetical protein pa5362 SWALL:Q9HTJ8 (EMBL:AE004948) (446 aa) fasta scores: E(): 2.8e-73, 51.38% id in 432 aa, and to Xanthomonas campestris hypothetical protein xcc1493 SWALL:AAM40789 (EMBL:AE012250) (454 aa) fasta scores: E(): 1.1e-41, 47.81% id in 435 aa, and to Bacillus subtilis hypothetical protein YhdP SWALL:YHDP_BACSU (SWALL:O07585) (444 aa) fasta scores: E(): 5e-37, 30.13% id in 438 aa; hypothetical protein 2453984..2455324 Burkholderia pseudomallei K96243 3097205 YP_111800.1 CDS BPSS1796 NC_006351.1 2455360 2455950 D Similar to Ralstonia solanacearum thiamine-phosphate pyrophosphorylase ThiE2 or rsp0984 or rs02315 SWALL:Q8XR75 (EMBL:AL646082) (198 aa) fasta scores: E(): 4.6e-24, 44.79% id in 192 aa, and to Streptococcus pneumoniae, and Streptococcus pneumoniae probable thiamine-phosphate pyrophosphorylase 2 ThiE2 or ThiE or sp0725 or spr0637 SWALL:THE2_STRPN (SWALL:Q97RR8) (210 aa) fasta scores: E(): 9.8e-08, 29.41% id in 170 aa; hypothetical protein 2455360..2455950 Burkholderia pseudomallei K96243 3097206 YP_111801.1 CDS BPSS1797 NC_006351.1 2456109 2457752 R Similar to Ralstonia solanacearum maltooligosyl trehalose trehalohydrolase rsp0237 or rs05186 SWALL:Q8XT78 (EMBL:AL646077) (622 aa) fasta scores: E(): 7.3e-43, 36.26% id in 626 aa, and to Rhizobium sp. malto-oligosyltrehalose trehalohydrolase TreZ SWALL:TREZ_RHISP (SWALL:Q53238) (596 aa) fasta scores: E(): 1.6e-08, 30.13% id in 365 aa; trehalose trehalohydrolase complement(2456109..2457752) Burkholderia pseudomallei K96243 3096087 YP_111802.1 CDS BPSS1798 NC_006351.1 2458028 2458741 D Similar to Agrobacterium tumefaciens hypothetical protein atu5140 or agr_pat_202 SWALL:Q8UKG9 (EMBL:AE008938) (238 aa) fasta scores: E(): 9.5e-47, 60.6% id in 231 aa, and to Pseudomonas aeruginosa hypothetical protein pa2034 SWALL:Q9I281 (EMBL:AE004629) (224 aa) fasta scores: E(): 1.4e-16, 38.24% id in 217 aa; hypothetical protein 2458028..2458741 Burkholderia pseudomallei K96243 3095967 YP_111803.1 CDS BPSS1799 NC_006351.1 2459079 2459534 D Similar to Salmonella typhimurium cytoplasmic protein stm4549 SWALL:Q8ZJX0 (EMBL:AE008914) (152 aa) fasta scores: E(): 6.4e-34, 60.52% id in 152 aa, and to Pseudomonas aeruginosa hypothetical protein pa1357 SWALL:Q9I3Y7 (EMBL:AE004565) (158 aa) fasta scores: E(): 6.6e-34, 61.84% id in 152 aa; hypothetical protein 2459079..2459534 Burkholderia pseudomallei K96243 3095968 YP_111804.1 CDS BPSS1800 NC_006351.1 2459599 2460837 R Similar to Escherichia coli L-lactate dehydrogenase LldD or LctD or b3605 SWALL:LLDD_ECOLI (SWALL:P33232) (396 aa) fasta scores: E(): 3.4e-45, 40.43% id in 366 aa, and to Pseudomonas putida L(+)-mandelate dehydrogenase MdlB SWALL:MDLB_PSEPU (SWALL:P20932) (393 aa) fasta scores: E(): 4.5e-46, 39.56% id in 369 aa; dehydrogenase complement(2459599..2460837) Burkholderia pseudomallei K96243 3095089 YP_111805.1 CDS BPSS1801 NC_006351.1 2461063 2461500 D Similar to Methanosarcina mazei transposase mm2165 or mm3236 SWALL:AAM31861 (EMBL:AE013456) (168 aa) fasta scores: E(): 0.0016, 29.56% id in 115 aa, and to Sulfolobus solfataricus first ORF in transposon ISC1078 sso1384 SWALL:Q97YE2 (EMBL:AE006753) (152 aa) fasta scores: E(): 0.0043, 26.05% id in 119 aa; transposon protein 2461063..2461500 Burkholderia pseudomallei K96243 3095615 YP_111806.1 CDS BPSS1802 NC_006351.1 2461742 2462368 R Similar to Rhizobium loti hypothetical protein Mll3530 mll3530 SWALL:Q98G16 (EMBL:AP003002) (208 aa) fasta scores: E(): 1.2e-33, 52.82% id in 195 aa, and to Pseudomonas putida conserved hypothetical protein pp3405 SWALL:AAN69008 (EMBL:AE016786) (209 aa) fasta scores: E(): 3.6e-10, 30.1% id in 196 aa. Note: This CDS has an alternative start codon at residue 12; hypothetical protein complement(2461742..2462368) Burkholderia pseudomallei K96243 3095616 YP_111807.1 CDS BPSS1803 NC_006351.1 2462431 2463285 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2489 SWALL:Q9I0Z3 (EMBL:AE004676) (271 aa) fasta scores: E(): 2.3e-43, 44.01% id in 259 aa, and to Streptomyces coelicolor AraC-family regulatory protein sco2294 or scc30.02C SWALL:Q9L019 (EMBL:AL939112) (278 aa) fasta scores: E(): 1.6e-23, 32.95% id in 267 aa; AraC family transcriptional regulator 2462431..2463285 Burkholderia pseudomallei K96243 3095107 YP_111808.1 CDS BPSS1804 NC_006351.1 2463970 2465058 D hypothetical protein 2463970..2465058 Burkholderia pseudomallei K96243 3096938 YP_111809.1 CDS BPSS1805 NC_006351.1 2465125 2465709 R Similar to Rhodobacter capsulatus hypothetical 19.0 kDa protein SWALL:O68026 (EMBL:AF010496) (190 aa) fasta scores: E(): 7.5e-10, 34.03% id in 191 aa, and to Escherichia coli hypothetical protein YfiK or b2578 SWALL:YFIK_ECOLI (SWALL:P38101) (195 aa) fasta scores: E(): 2.7e-07, 32.5% id in 160 aa; hypothetical protein complement(2465125..2465709) Burkholderia pseudomallei K96243 3096939 YP_111810.1 CDS BPSS1806 NC_006351.1 2465765 2466187 R Similar to Pyrobaculum aerophilum hypothetical protein pae2796 SWALL:Q8ZUG4 (EMBL:AE009894) (110 aa) fasta scores: E(): 4.7e-12, 40.56% id in 106 aa, and to Clostridium acetobutylicum possible pectin degradation protein cac3376 SWALL:Q97DU5 (EMBL:AE007834) (114 aa) fasta scores: E(): 1.8e-06, 35.64% id in 101 aa; hypothetical protein complement(2465765..2466187) Burkholderia pseudomallei K96243 3096776 YP_111811.1 CDS mhpE NC_006351.1 2466225 2467268 R catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase complement(2466225..2467268) Burkholderia pseudomallei K96243 3095371 YP_111812.1 CDS mhpF NC_006351.1 2467265 2468158 R catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase complement(2467265..2468158) Burkholderia pseudomallei K96243 3095332 YP_111813.1 CDS BPSS1809 NC_006351.1 2468155 2468997 R Similar to Pseudomonas aeruginosa probable thioesterase pa2425 SWALL:Q9I156 (EMBL:AE004670) (254 aa) fasta scores: E(): 1.2e-31, 41.46% id in 246 aa, and to Bacillus brevis gramicidin S biosynthesis GrsT protein SWALL:GRST_BACBR (SWALL:P14686) (256 aa) fasta scores: E(): 4e-31, 37.29% id in 244 aa; thioesterase complement(2468155..2468997) Burkholderia pseudomallei K96243 3096141 YP_111814.1 CDS ilvE NC_006351.1 2468994 2469938 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 branched-chain amino acid aminotransferase IlvE or b3770 or c4692 or z5281 or ecs4704 SWALL:ILVE_ECOLI (SWALL:P00510) (308 aa) fasta scores: E(): 8.4e-55, 49.34% id in 304 aa, and to Vibrio cholerae branched-chain amino acid aminotransferase vc0029 SWALL:Q9KVV9 (EMBL:AE004094) (319 aa) fasta scores: E(): 2e-59, 52.11% id in 307 aa; branched-chain amino acid aminotransferase complement(2468994..2469938) Burkholderia pseudomallei K96243 3096300 YP_111815.1 CDS BPSS1811 NC_006351.1 2469953 2470636 R Similar to Legionella pneumophila protein DlpA SWALL:DLPA_LEGPN (SWALL:Q48806) (615 aa) fasta scores: E(): 6.2e-12, 29.54% id in 220 aa, and to Ralstonia solanacearum transferase rsp1231 or rs03175 SWALL:Q8XQJ4 (EMBL:AL646083) (216 aa) fasta scores: E(): 5.3e-09, 27.35% id in 223 aa; transferase complement(2469953..2470636) Burkholderia pseudomallei K96243 3096142 YP_111816.1 CDS BPSS1812 NC_006351.1 2470644 2471441 R Similar to Bacillus brevis gramicidin S biosynthesis GrsT protein SWALL:GRST_BACBR (SWALL:P14686) (256 aa) fasta scores: E(): 6.4e-33, 36.84% id in 247 aa, and to Streptomyces coelicolor thioesterase sco5894 or sc3f7.14 SWALL:O54157 (EMBL:AL939125) (280 aa) fasta scores: E(): 2.3e-27, 37.87% id in 264 aa; non-ribosomal peptide synthesis thioesterase complement(2470644..2471441) Burkholderia pseudomallei K96243 3095856 YP_111817.1 CDS BPSS1813 NC_006351.1 2471445 2472350 R Similar to Pseudomonas syringae syringomycin biosynthesis enzyme 2 SyrB2 SWALL:Q9RBY6 (EMBL:U25130) (310 aa) fasta scores: E(): 2e-50, 43.33% id in 300 aa, and to Pseudomonas syringae CmaB SWALL:O50472 (EMBL:U14657) (262 aa) fasta scores: E(): 8.9e-35, 40.81% id in 245 aa; non-ribosomal peptide synthase related protein complement(2471445..2472350) Burkholderia pseudomallei K96243 3095989 YP_111818.1 CDS BPSS1814 NC_006351.1 2472447 2472707 R Similar to the C-terminal region of Streptomyces antibioticus SimH SWALL:Q9F5J4 (EMBL:AF321122) (997 aa) fasta scores: E(): 0.067, 31.7% id in 82 aa, and of Streptomyces tendae NikP1 protein SWALL:Q9F2E7 (EMBL:AJ250581) (677 aa) fasta scores: E(): 0.076, 30.12% id in 83 aa; hypothetical protein complement(2472447..2472707) Burkholderia pseudomallei K96243 3095990 YP_111819.1 CDS BPSS1815 NC_006351.1 2472704 2474293 R Similar to Streptomyces avermitilis non-ribosomal peptide synthetase SWALL:Q93H39 (EMBL:AB070952) (625 aa) fasta scores: E(): 4.2e-44, 38.2% id in 513 aa, and to Streptomyces coelicolor peptide synthase sco5891 or st3f7.11 SWALL:O54154 (EMBL:AL939125) (532 aa) fasta scores: E(): 1.8e-38, 32.47% id in 502 aa; non-ribosomal peptide synthase complement(2472704..2474293) Burkholderia pseudomallei K96243 3096984 YP_111820.1 CDS BPSS1816 NC_006351.1 2475528 2475821 R Similar to Pseudomonas aurantiaca transcriptional regulatory protein SWALL:AAN18029 (EMBL:AY135187) (107 aa) fasta scores: E(): 2.5e-21, 66.66% id in 96 aa, and to Streptomyces coelicolor transcriptional regulator sco4059 or 2scd60.25 SWALL:Q9AK58 (EMBL:AL939118) (111 aa) fasta scores: E(): 3.2e-06, 40% id in 95 aa; regulatory protein complement(2475528..2475821) Burkholderia pseudomallei K96243 3096339 YP_111821.1 CDS BPSS1817 NC_006351.1 2475877 2476338 R Similar to Pseudomonas aurantiaca hypothetical protein SWALL:Q84H33 (EMBL:AY135187) (151 aa) fasta scores: E(): 6.7e-37, 62.66% id in 150 aa, and to Rhizobium meliloti hypothetical protein SMB21007 smb21007 SWALL:Q92UJ5 (EMBL:AL603646) (139 aa) fasta scores: E(): 0.00036, 28.76% id in 146 aa; hypothetical protein complement(2475877..2476338) Burkholderia pseudomallei K96243 3096340 YP_111822.1 CDS BPSS1818 NC_006351.1 2476485 2477138 R Similar to Ralstonia solanacearum probable transmembrane protein rsp0410 or rs00867 SWALL:Q8XSQ7 (EMBL:AL646078) (224 aa) fasta scores: E(): 5e-45, 52.17% id in 207 aa, and to Deinococcus radiodurans hypothetical protein dr0351 SWALL:Q9RXG2 (EMBL:AE001895) (227 aa) fasta scores: E(): 6.6e-16, 31.05% id in 219 aa; hypothetical protein complement(2476485..2477138) Burkholderia pseudomallei K96243 3095508 YP_111823.1 CDS BPSS1819 NC_006351.1 2477260 2477994 D Similar to Escherichia coli serine/threonine protein phosphatase 1 PphA or PrpA or b1838 SWALL:PRP1_ECOLI (SWALL:P55798) (218 aa) fasta scores: E(): 3e-17, 35.74% id in 221 aa, and to Salmonella typhimurium serine/threonine protein phosphatase PrpA or stm1853 SWALL:Q8ZNY9 (EMBL:AE008782) (216 aa) fasta scores: E(): 2.9e-13, 32.12% id in 221 aa; serine/threonine protein phosphatase 2477260..2477994 Burkholderia pseudomallei K96243 3095688 YP_111824.1 CDS BPSS1820 NC_006351.1 2478095 2478796 R Similar to Rhizobium loti hypothetical protein mll2215 SWALL:Q98IW7 (EMBL:AP002999) (240 aa) fasta scores: E(): 5.3e-23, 37.38% id in 214 aa, and to Brucella melitensis hypothetical protein bmeii0978 SWALL:Q8YBC2 (EMBL:AE009731) (221 aa) fasta scores: E(): 1.7e-16, 34.34% id in 198 aa; hypothetical protein complement(2478095..2478796) Burkholderia pseudomallei K96243 3095689 YP_111825.1 CDS BPSS1821 NC_006351.1 2478793 2479212 R Similar to Rhizobium sp. hypothetical 14.7 kDa protein y4oB SWALL:Y4OB_RHISN (SWALL:P55587) (129 aa) fasta scores: E(): 5.9e-21, 59.13% id in 115 aa, and to Brucella melitensis hypothetical protein bmeii0977 SWALL:Q8YBC3 (EMBL:AE009731) (158 aa) fasta scores: E(): 1.2e-15, 43.84% id in 130 aa; hypothetical protein complement(2478793..2479212) Burkholderia pseudomallei K96243 3096052 YP_111826.1 CDS BPSS1822 NC_006351.1 2479942 2480850 R Similar to Pseudomonas aeruginosa hypothetical protein pa0830 SWALL:Q9I5A9 (EMBL:AE004517) (277 aa) fasta scores: E(): 7.1e-34, 38.57% id in 267 aa, and to Caulobacter crescentus FF domain protein cc1344 SWALL:Q9A8K9 (EMBL:AE005810) (285 aa) fasta scores: E(): 1.7e-29, 35.31% id in 286 aa; hypothetical protein complement(2479942..2480850) Burkholderia pseudomallei K96243 3096064 YP_111827.1 CDS fbp NC_006351.1 2481354 2481695 D Similar to Neisseria meningitidis peptidyl-prolyl cis-trans isomerase Fbp or nmb0027 SWALL:FKBP_NEIMB (SWALL:P25138) (109 aa) fasta scores: E(): 2.6e-24, 66.66% id in 105 aa, and to Neurospora crassa FK506-binding protein 9g6.180 SWALL:FKBP_NEUCR (SWALL:P20080) (120 aa) fasta scores: E(): 1.3e-19, 53.5% id in 114 aa; peptidyl-prolyl cis-trans isomerase 2481354..2481695 Burkholderia pseudomallei K96243 3094935 YP_111828.1 CDS BPSS1824 NC_006351.1 2481758 2482525 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3220 SWALL:Q9HZ20 (EMBL:AE004745) (254 aa) fasta scores: E(): 3.8e-21, 37.4% id in 254 aa, and to Photobacterium leiognathi probable transcriptional regulator LumQ SWALL:LUMQ_PHOLE (SWALL:Q51872) (248 aa) fasta scores: E(): 9.7e-13, 24.59% id in 248 aa; AraC family transcriptional regulator 2481758..2482525 Burkholderia pseudomallei K96243 3096065 YP_111829.1 CDS BPSS1825 NC_006351.1 2482814 2483980 R Similar to Anabaena sp. HepB or alr3698 SWALL:P70778 (EMBL:U68035) (389 aa) fasta scores: E(): 1.7e-42, 38.03% id in 376 aa, and to Mycobacterium tuberculosis hypothetical protein rv0486 or mt0504 or mtcy20g9.12 SWALL:Y486_MYCTU (SWALL:Q11152) (480 aa) fasta scores: E(): 1.4e-11, 33.89% id in 354 aa; glycosyltransferase complement(2482814..2483980) Burkholderia pseudomallei K96243 3095604 YP_111830.1 CDS BPSS1826 NC_006351.1 2483980 2485164 R Similar to Anabaena sp. glycosyltransferase alr2839 SWALL:Q8YT87 (EMBL:AP003591) (381 aa) fasta scores: E(): 3.1e-62, 47.25% id in 383 aa, and to Methanobacterium thermoautotrophicum LPS biosynthesis related protein mth450 SWALL:O26550 (EMBL:AE000829) (411 aa) fasta scores: E(): 2.7e-13, 27.87% id in 330 aa; glycosyltransferase complement(2483980..2485164) Burkholderia pseudomallei K96243 3095682 YP_111831.1 CDS BPSS1827 NC_006351.1 2485161 2486636 R Similar to Anabaena sp. hypothetical protein alr2841 SWALL:Q8YT85 (EMBL:AP003591) (474 aa) fasta scores: E(): 1.5e-53, 32.74% id in 455 aa; hypothetical protein complement(2485161..2486636) Burkholderia pseudomallei K96243 3095683 YP_111832.1 CDS BPSS1828 NC_006351.1 2486648 2487787 R glycosyltransferase group 1 protein complement(2486648..2487787) Burkholderia pseudomallei K96243 3095923 YP_111833.1 CDS BPSS1829 NC_006351.1 2487831 2488778 R Similar to Anabaena sp. glycosyltransferase alr2840 SWALL:Q8YT86 (EMBL:AP003591) (315 aa) fasta scores: E(): 3.2e-53, 48.84% id in 303 aa, and to Archaeoglobus fulgidus succinoglycan biosynthesis protein af0620 SWALL:O29635 (EMBL:AE001062) (297 aa) fasta scores: E(): 1.9e-08, 30.73% id in 231 aa; glycosyltransferase complement(2487831..2488778) Burkholderia pseudomallei K96243 3095924 YP_111834.1 CDS BPSS1830 NC_006351.1 2488808 2491027 R Similar to Acinetobacter johnsonii tyrosine-protein kinase Ptk SWALL:PTK_ACIJO (SWALL:O52788) (733 aa) fasta scores: E(): 9.7e-68, 33.1% id in 728 aa, and to Escherichia coli tyrosine-protein kinase Wzc or b2060 SWALL:WZC_ECOLI (SWALL:P76387) (720 aa) fasta scores: E(): 4e-63, 36.25% id in 742 aa; exopolysaccharide biosynthesis-like tyrosine-protein kinase complement(2488808..2491027) Burkholderia pseudomallei K96243 3095477 YP_111835.1 CDS BPSS1831 NC_006351.1 2491078 2492253 R Similar to Erwinia amylovora amylovoran export outer membrane protein AmsH precursor SWALL:AMSH_ERWAM (SWALL:Q46629) (377 aa) fasta scores: E(): 1.3e-34, 38.36% id in 391 aa, and to Escherichia coli, and Escherichia coli O157:H7 polysaccharide export protein Wza precursor b2062 or z3227 or ecs2867 SWALL:WZA_ECOLI (SWALL:P76388) (379 aa) fasta scores: E(): 7.2e-34, 36.45% id in 395 aa, and to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fasta scores: E(): 3.3e-35, 38.94% id in 380 aa; exopolysaccharide (EPS) biosynthesis related polysaccharide lipoprotein complement(2491078..2492253) Burkholderia pseudomallei K96243 3095991 YP_111836.1 CDS BPSS1832 NC_006351.1 2492247 2492681 R Similar to Escherichia coli, and Escherichia coli O157:H7 low molecular weight protein-tyrosine-phosphatase Wzb or b2061 or z3226 or ecs2866 SWALL:WZB_ECOLI (SWALL:P77153) (147 aa) fasta scores: E(): 5.1e-16, 40.27% id in 144 aa, and to Acinetobacter johnsonii low molecular weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO (SWALL:O52787) (142 aa) fasta scores: E(): 1.7e-16, 39.86% id in 143 aa. Note: Also similar to BPSL2779 (145 aa) fasta scores: E(): 5.1e-15, 41.259% identity in 143 aa overlap; exopolysaccharide (EPS) biosynthesis-likelow molecular weight protein-tyrosine-phosphatase complement(2492247..2492681) Burkholderia pseudomallei K96243 3095992 YP_111837.1 CDS udg2 NC_006351.1 2492704 2494125 R Similar to Pseudomonas aeruginosa UDP-glucose 6-dehydrogenase Udg or Ugd or pa2022 SWALL:UDG_PSEAE (SWALL:O86422) (453 aa) fasta scores: E(): 5.7e-83, 51.97% id in 456 aa, and to Rhizobium meliloti UDP-glucose 6-dehydrogenase RkpK or r01082 or smc02641 SWALL:UDG_RHIME (SWALL:O54068) (437 aa) fasta scores: E(): 2.8e-70, 49.66% id in 453 aa. Note: Also similar to BPSL2511 Udg (467 aa) fasta scores: E(): 1.5e-121, 76.304% identity in 460 aa overlap; UDP-glucose 6-dehydrogenase 2 complement(2492704..2494125) Burkholderia pseudomallei K96243 3096805 YP_111838.1 CDS BPSS1834 NC_006351.1 2494171 2495586 R Similar to Escherichia coli colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ or b2047 SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 2.5e-59, 39.65% id in 469 aa, and to Salmonella typhimurium undecaprenylphosphate glucosephosphotransferase WcaJ or stm2103 SWALL:Q9F799 (EMBL:AF285085) (464 aa) fasta scores: E(): 2.8e-58, 38.92% id in 465 aa. Note: Also similar to BPSL0618 (473 aa) fasta scores: E(): 3.5e-96, 50.433% identity in 462 aa overlap; lipopolysaccharide biosynthesis-like protein complement(2494171..2495586) Burkholderia pseudomallei K96243 3096118 YP_111839.1 CDS BPSS1835 NC_006351.1 2496042 2497502 D Similar to Salmonella enterica subsp. enterica GDP-mannose pyrophosphorylase ManC SWALL:Q9EXX7 (EMBL:AY012192) (482 aa) fasta scores: E(): 4.4e-76, 48.45% id in 485 aa, and to Escherichia coli O157:H7 mannose-1-phosphate guanylyltransferase ManC or z3195 or ecs2836 SWALL:MANC_ECO57 (SWALL:O85342) (482 aa) fasta scores: E(): 1.2e-75, 48.14% id in 486 aa. Note: Also similar to BPSL0605 ManC (531 aa) fasta scores: E(): 1.2e-105, 63.843% identity in 484 aa overlap; LPS biosynthesis mannose-1-phosphate guanylyltransferase 2496042..2497502 Burkholderia pseudomallei K96243 3095239 YP_111840.1 CDS BPSS1836 NC_006351.1 2497575 2498579 R Similar in its N-terminal region to Shigella flexneri IS1650 ORFA s0204 SWALL:Q9AFP3 (EMBL:AF348706) (149 aa) fasta scores: E(): 5.5e-06, 37.77% id in 90 aa, and to Agrobacterium tumefaciens ORF3 protein SWALL:Q00429 (EMBL:X53945) (123 aa) fasta scores: E(): 1.1e-05, 35.6% id in 132 aa; hypothetical protein complement(2497575..2498579) Burkholderia pseudomallei K96243 3095240 YP_111841.1 CDS BPSS1837 NC_006351.1 2499156 2499737 R Similar to Sulfolobus tokodaii hypothetical protein st2368 SWALL:Q96XZ9 (EMBL:AP000989) (188 aa) fasta scores: E(): 2.4e-09, 32.11% id in 137 aa, and to Sulfolobus solfataricus hypothetical protein sso2644 SWALL:Q97VH9 (EMBL:AE006859) (188 aa) fasta scores: E(): 3.9e-07, 32.84% id in 137 aa; hypothetical protein complement(2499156..2499737) Burkholderia pseudomallei K96243 3096881 YP_111842.1 CDS BPSS1838 NC_006351.1 2499763 2501100 R Similar to Escherichia coli, and Escherichia coli O157:H7 anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC or b2243 or z3501 or ecs3128 SWALL:GLPC_ECOLI (SWALL:P13034) (396 aa) fasta scores: E(): 3e-22, 28.08% id in 413 aa, and to Salmonella typhimurium SN-glycerol-3-phosphate dehydrogenase stm2286 SWALL:Q8ZNG3 (EMBL:AE008802) (396 aa) fasta scores: E(): 1.3e-22, 28.7% id in 418 aa; ferredoxin complement(2499763..2501100) Burkholderia pseudomallei K96243 3096882 YP_111843.1 CDS BPSS1839 NC_006351.1 2501208 2501630 R Similar to the N-terminal region of Porphyromonas gingivalis rubrerythrin Rr or Rbr SWALL:RUBY_PORGI (SWALL:Q9AGG3) (200 aa) fasta scores: E(): 2.8e-17, 46.09% id in 141 aa, and of Desulfovibrio vulgaris rubrerythrin Rr SWALL:RUBY_DESVH (SWALL:P24931) (191 aa) fasta scores: E(): 5.8e-16, 45.58% id in 136 aa. Note: The C-terminal region of the database matches belongs to the rubredoxin family; this CDS presents no similarities to this region; oxidative stress related rubrerythrin protein complement(2501208..2501630) Burkholderia pseudomallei K96243 3096815 YP_111844.1 CDS BPSS1840 NC_006351.1 2501901 2502935 R Similar to Ralstonia solanacearum N-acetylmuramoyl-L-alanine amidase rsc1796 or rs04196 SWALL:Q8XYG2 (EMBL:AL646066) (343 aa) fasta scores: E(): 3.2e-86, 68.86% id in 334 aa, and to Escherichia coli probable N-acetylmuramoyl-L-alanine amidase YbjR or b0867 SWALL:YBJR_ECOLI (SWALL:P75820) (276 aa) fasta scores: E(): 5e-34, 41.72% id in 290 aa; N-acetylmuramoyl-L-alanine amidase complement(2501901..2502935) Burkholderia pseudomallei K96243 3096352 YP_111845.1 CDS BPSS1841 NC_006351.1 2503507 2504775 R Similar to Streptomyces coelicolor RNA polymerase sigma factor sco4757 or sc6g4.35 SWALL:O86798 (EMBL:AL939121) (419 aa) fasta scores: E(): 1.7e-96, 65.4% id in 422 aa, and to Rhizobium loti sigma-70 factor, ECF subfamily mll7837 SWALL:Q984U6 (EMBL:AP003012) (417 aa) fasta scores: E(): 7.9e-52, 47.5% id in 421 aa; RNA polymerase sigma factor complement(2503507..2504775) Burkholderia pseudomallei K96243 3096353 YP_111846.1 CDS BPSS1842 NC_006351.1 2504772 2505311 R Similar to Rhizobium loti hypothetical protein mll4384 SWALL:Q98E68 (EMBL:AP003004) (175 aa) fasta scores: E(): 2.5e-14, 37.41% id in 155 aa; hypothetical protein complement(2504772..2505311) Burkholderia pseudomallei K96243 3095450 YP_111847.1 CDS BPSS1843 NC_006351.1 2505333 2505746 R Similar to Pseudomonas aeruginosa hypothetical protein pa1354 SWALL:Q9I3Z0 (EMBL:AE004565) (141 aa) fasta scores: E(): 2.6e-25, 56.93% id in 137 aa, and to Ralstonia solanacearum hypothetical protein rsp0637 or rs03730 SWALL:Q8XS44 (EMBL:AL646079) (143 aa) fasta scores: E(): 3.5e-21, 50% id in 140 aa; hypothetical protein complement(2505333..2505746) Burkholderia pseudomallei K96243 3095289 YP_111848.1 CDS BPSS1844 NC_006351.1 2505912 2506265 R Similar to Rhizobium loti hypothetical protein mlr2587 SWALL:Q98I36 (EMBL:AP003000) (134 aa) fasta scores: E(): 3e-08, 34.51% id in 113 aa, and to Pseudomonas putida conserved hypothetical protein pp4555 SWALL:AAN70128 (EMBL:AE016791) (114 aa) fasta scores: E(): 1.4e-07, 37.5% id in 112 aa; hypothetical protein complement(2505912..2506265) Burkholderia pseudomallei K96243 3095290 YP_111849.1 CDS BPSS1845 NC_006351.1 2506642 2508516 D Similar to Xanthomonas axonopodis nuclease xac0274 SWALL:AAM35166 (EMBL:AE011652) (609 aa) fasta scores: E(): 1.3e-59, 39.51% id in 615 aa, and to Anabaena sp. hypothetical protein alr0276 SWALL:Q8Z027 (EMBL:AP003581) (2348 aa) fasta scores: E(): 4.1e-38, 43.57% id in 615 aa; endonuclease/exonuclease/phosphatase 2506642..2508516 Burkholderia pseudomallei K96243 3095094 YP_111850.1 CDS BPSS1846 NC_006351.1 2509305 2509685 D Low similarity to Yersinia pestis membrane protein ypo0570 or y3609 SWALL:Q8ZID5 (EMBL:AJ414143) (101 aa) fasta scores: E(): 0.0024, 30.43% id in 92 aa, and to Pseudomonas aeruginosa hypothetical protein pa2754 SWALL:Q9I089 (EMBL:AE004703) (109 aa) fasta scores: E(): 0.021, 28.7% id in 108 aa; hypothetical protein 2509305..2509685 Burkholderia pseudomallei K96243 3095095 YP_111851.1 CDS BPSS1847 NC_006351.1 2509734 2510318 D Similar to Ralstonia solanacearum lipoprotein rsc1878 or rs03438 SWALL:Q8XY85 (EMBL:AL646067) (200 aa) fasta scores: E(): 2.6e-34, 56.47% id in 193 aa, and to Xylella fastidiosa hypothetical protein xf0565 SWALL:Q9PFU2 (EMBL:AE003903) (301 aa) fasta scores: E(): 1.5e-06, 30.38% id in 181 aa; lipoprotein 2509734..2510318 Burkholderia pseudomallei K96243 3095255 YP_111852.1 CDS BPSS1848 NC_006351.1 2510510 2511604 D Similar to Pseudomonas aeruginosa hypothetical protein pa2651 SWALL:Q9I0I7 (EMBL:AE004694) (352 aa) fasta scores: E(): 3e-85, 64.7% id in 340 aa, and to Brucella suis membrane protein, bra0460 SWALL:AAN33654 (EMBL:AE014544) (352 aa) fasta scores: E(): 4.3e-65, 48.82% id in 340 aa. Note: This CDS contains a possible alternative start codon at residue 13; hypothetical protein 2510510..2511604 Burkholderia pseudomallei K96243 3094990 YP_111853.1 CDS BPSS1849 NC_006351.1 2511820 2512296 R hypothetical protein complement(2511820..2512296) Burkholderia pseudomallei K96243 3094991 YP_111854.1 CDS BPSS1850 NC_006351.1 2512421 2514517 R Similar to Pseudomonas aeruginosa hypothetical protein Pa0781 pa0781 SWALL:Q9I5F7 (EMBL:AE004513) (687 aa) fasta scores: E(): 4.9e-139, 56.81% id in 690 aa, and to Xanthomonas axonopodis outer membrane hemin receptor xac2829 SWALL:Q8PIR6 (EMBL:AE011924) (687 aa) fasta scores: E(): 2.9e-21, 33.37% id in 731 aa; hypothetical protein complement(2512421..2514517) Burkholderia pseudomallei K96243 3095485 YP_111855.1 CDS BPSS1851 NC_006351.1 2514984 2516189 D Similar to Rhizobium meliloti transmembrane transport protein ra1285 or sma2377 SWALL:Q92XG9 (EMBL:AE007314) (389 aa) fasta scores: E(): 2.8e-27, 32.34% id in 371 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4136 SWALL:Q9HWP5 (EMBL:AE004830) (402 aa) fasta scores: E(): 1.3e-23, 31.65% id in 398 aa; transport-related membrane protein 2514984..2516189 Burkholderia pseudomallei K96243 3096896 YP_111856.1 CDS BPSS1852 NC_006351.1 2516831 2517847 R Similar to Pseudomonas aeruginosa probable oxidoreductase pa1648 SWALL:Q9I377 (EMBL:AE004592) (334 aa) fasta scores: E(): 4.9e-54, 46.6% id in 339 aa, and to Rhizobium loti quinone oxidoreductase mlr6843 SWALL:Q987Z3 (EMBL:AP003010) (339 aa) fasta scores: E(): 5.7e-44, 43.1% id in 341 aa; oxidoreductase complement(2516831..2517847) Burkholderia pseudomallei K96243 3096897 YP_111857.1 CDS BPSS1853 NC_006351.1 2518209 2519006 R Converts 2,5-dichloro-2,5-cyclohexadiene-1,4-diol to 2,5-dichlorohydroquinone; short chain dehydrogenase complement(2518209..2519006) Burkholderia pseudomallei K96243 3094931 YP_111858.1 CDS BPSS1854 NC_006351.1 2519246 2520016 R Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1828 SWALL:Q9I2R7 (EMBL:AE004609) (255 aa) fasta scores: E(): 3.1e-62, 66.66% id in 255 aa, and to Caulobacter crescentus oxidoreductase, short-chain dehydrogenase/reductase cc3076 SWALL:Q9A3X5 (EMBL:AE005971) (254 aa) fasta scores: E(): 3.1e-29, 39.2% id in 250 aa; short chain dehydrogenase complement(2519246..2520016) Burkholderia pseudomallei K96243 3094932 YP_111859.1 CDS BPSS1855 NC_006351.1 2520050 2520739 R Similar to Pseudomonas aeruginosa hypothetical protein pa1831 SWALL:Q9I2R4 (EMBL:AE004609) (236 aa) fasta scores: E(): 1.9e-19, 33.89% id in 236 aa; phosphoglycerate mutase complement(2520050..2520739) Burkholderia pseudomallei K96243 3097075 YP_111860.1 CDS BPSS1856 NC_006351.1 2520736 2521812 R Similar to Pseudomonas aeruginosa hypothetical protein pa1829 SWALL:Q9I2R6 (EMBL:AE004609) (356 aa) fasta scores: E(): 2.3e-67, 51.36% id in 331 aa, and to Streptomyces coelicolor phosphotransferase sco1689 or sci30a.10 SWALL:Q9S263 (EMBL:AL939109) (341 aa) fasta scores: E(): 1.4e-31, 38.11% id in 328 aa; phosphotransferase complement(2520736..2521812) Burkholderia pseudomallei K96243 3096467 YP_111861.1 CDS BPSS1857 NC_006351.1 2521809 2523041 R Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa2550 SWALL:Q9I0T4 (EMBL:AE004683) (409 aa) fasta scores: E(): 6e-103, 63.52% id in 403 aa, and to Rattus norvegicus acyl-CoA dehydrogenase, medium-chain specific, mitochondrial precursor AcaDM SWALL:ACDM_RAT (SWALL:P08503) (421 aa) fasta scores: E(): 9.5e-27, 28.75% id in 400 aa; acyl-CoA dehydrogenase complement(2521809..2523041) Burkholderia pseudomallei K96243 3096468 YP_111862.1 CDS BPSS1858 NC_006351.1 2523398 2524324 D Similar to Burkholderia cepacia DntR SWALL:Q8VUD7 (EMBL:AF169302) (301 aa) fasta scores: E(): 9.3e-22, 30.4% id in 296 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2018 or rs03586 SWALL:Q8XXU5 (EMBL:AL646067) (321 aa) fasta scores: E(): 1.9e-38, 41.11% id in 304 aa; LysR family transcriptional regulator 2523398..2524324 Burkholderia pseudomallei K96243 3095314 YP_111863.1 CDS BPSS1859 NC_006351.1 2524416 2524817 D Similar to Xanthomonas campestris hypothetical protein xcc2716 SWALL:AAM41988 (EMBL:AE012384) (144 aa) fasta scores: E(): 6.4e-13, 42.01% id in 119 aa, and to Caulobacter crescentus hypothetical protein cc2998 SWALL:Q9A445 (EMBL:AE005963) (158 aa) fasta scores: E(): 2.3e-10, 38.39% id in 112 aa; hypothetical protein 2524416..2524817 Burkholderia pseudomallei K96243 3095282 YP_111864.1 CDS BPSS1860 NC_006351.1 2524957 2526144 R hypothetical protein complement(2524957..2526144) Burkholderia pseudomallei K96243 3095283 YP_111865.1 CDS BPSS1861 NC_006351.1 2527026 2527907 R Similar to Pseudomonas aeruginosa hypothetical protein pa2765 SWALL:Q9I078 (EMBL:AE004704) (299 aa) fasta scores: E(): 4.7e-77, 64.84% id in 293 aa, and to Escherichia coli hypothetical protein YfeX or b2431 SWALL:YFEX_ECOLI (SWALL:P76536) (299 aa) fasta scores: E(): 7.6e-18, 31.12% id in 257 aa; hypothetical protein complement(2527026..2527907) Burkholderia pseudomallei K96243 3095870 YP_111866.1 CDS BPSS1862 NC_006351.1 2528589 2530598 D Similar to Rhizobium loti ATP-binding protein of ABC transporter mll0815 SWALL:Q98LY9 (EMBL:AP002995) (601 aa) fasta scores: E(): 1.6e-148, 71.28% id in 592 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase Exsa or atu4728 or agr_l_309 SWALL:Q8U6S8 (EMBL:AE009401) (600 aa) fasta scores: E(): 1.8e-141, 68.41% id in 592 aa; ABC transporter ATP-binding protein 2528589..2530598 Burkholderia pseudomallei K96243 3095871 YP_111867.1 CDS BPSS1863 NC_006351.1 2530933 2531631 R Similar to Anabaena sp. thij family protein all7521 SWALL:Q8ZSI9 (EMBL:AP003602) (226 aa) fasta scores: E(): 2.7e-43, 53.36% id in 208 aa, and to Streptomyces coelicolor hypothetical protein sco6747 sco6747 or sc5f2a.30 SWALL:Q9X7Q3 (EMBL:AL939129) (211 aa) fasta scores: E(): 7e-30, 43.81% id in 210 aa; DJ-1/PfpI family protein complement(2530933..2531631) Burkholderia pseudomallei K96243 3095108 YP_111868.1 CDS BPSS1864 NC_006351.1 2531740 2532780 D Similar to Streptomyces coelicolor transcriptional regulator sco6746 or sc5f2a.29 SWALL:Q9X7Q2 (EMBL:AL939129) (325 aa) fasta scores: E(): 2.3e-50, 50.94% id in 318 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc2960 SWALL:Q9A483 (EMBL:AE005960) (312 aa) fasta scores: E(): 5.1e-46, 47.92% id in 313 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; AraC family transcriptional regulator 2531740..2532780 Burkholderia pseudomallei K96243 3096381 YP_111869.1 CDS trpS NC_006351.1 2533352 2534392 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2533352..2534392 Burkholderia pseudomallei K96243 3097179 YP_111870.1 CDS BPSS1866 NC_006351.1 2534904 2535572 D Similar to Ralstonia solanacearum probable transmembrane protein rsc1027 or rs04225 SWALL:Q8Y0L6 (EMBL:AL646062) (250 aa) fasta scores: E(): 8e-10, 32.11% id in 218 aa; lipoprotein 2534904..2535572 Burkholderia pseudomallei K96243 3096382 YP_111871.1 CDS BPSS1866A NC_006351.1 2535679 2536092 R Possible gene remnant. Similar to the c-terminal regions of Rhizobium meliloti transcription factor SMA1454 SWALL:Q92YS0 (EMBL:AE007266) (356 aa) fasta scores: E(): 1.5, 30.4% id in 125 aa, and Pseudomonas putida transcriptional regulator, AraC family SWALL:Q88EF7 (EMBL:AE016790) (353 aa) fasta scores: E(): 0.49, 34.23% id in 111 aa; hypothetical protein complement(2535679..2536092) Burkholderia pseudomallei K96243 3096830 YP_111872.1 CDS BPSS1867 NC_006351.1 2536426 2537370 D Similar to Clostridium acetobutylicum conserved membrane protein, possible homolog of CAAX-like membrane endopeptidase cac0420 SWALL:Q97LY0 (EMBL:AE007556) (276 aa) fasta scores: E(): 5.8e-12, 27.13% id in 269 aa, and to Caulobacter crescentus membrane protein, cc2538 SWALL:Q9A5B2 (EMBL:AE005921) (309 aa) fasta scores: E(): 2.4e-11, 27.63% id in 304 aa; hypothetical protein 2536426..2537370 Burkholderia pseudomallei K96243 3095023 YP_111873.1 CDS BPSS1868 NC_006351.1 2537573 2538856 R Similar to Xanthomonas campestris hypothetical protein xcc1977 SWALL:Q8P988 (EMBL:AE012302) (440 aa) fasta scores: E(): 6.5e-89, 61.11% id in 414 aa, and to Clostridium perfringens hypothetical protein cpe0590 SWALL:Q8XMU8 (EMBL:AP003187) (437 aa) fasta scores: E(): 4.1e-60, 44.98% id in 389 aa; voltage gated chloride channel membrane protein complement(2537573..2538856) Burkholderia pseudomallei K96243 3095024 YP_111874.1 CDS BPSS1869 NC_006351.1 2539182 2539904 R Similar to Pseudomonas aeruginosa probable haloacid dehalogenase pa0810 SWALL:Q9I5C9 (EMBL:AE004516) (233 aa) fasta scores: E(): 1.6e-37, 48.08% id in 235 aa, and to Pseudomonas sp. 2-haloalkanoic acid dehalogenase I SWALL:HAD1_PSESP (SWALL:P24069) (227 aa) fasta scores: E(): 1e-08, 31.88% id in 207 aa; dehalogenase complement(2539182..2539904) Burkholderia pseudomallei K96243 3095300 YP_111875.1 CDS BPSS1870 NC_006351.1 2540279 2541307 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(2540279..2541307) Burkholderia pseudomallei K96243 3095301 YP_111876.1 CDS BPSS1871 NC_006351.1 2541314 2543908 R Similar to Thermotoga maritima chemotaxis protein CheA or tm0702 SWALL:CHEA_THEMA (SWALL:Q56310) (671 aa) fasta scores: E(): 2.2e-33, 27.4% id in 708 aa, and to Rhizobium loti chemotaxis histidine kinase mll9511 SWALL:Q98PD0 (EMBL:AP003017) (757 aa) fasta scores: E(): 1.1e-104, 49.07% id in 864 aa; chemotaxis-related histidine kinase complement(2541314..2543908) Burkholderia pseudomallei K96243 3094951 YP_111877.1 CDS BPSS1872 NC_006351.1 2543905 2544639 R Similar to Rhizobium loti hypothetical protein mll9513 SWALL:Q98PC9 (EMBL:AP003017) (234 aa) fasta scores: E(): 1.2e-21, 38.33% id in 240 aa, and the C-terminal region of Rhizobium meliloti chemotaxis protein CheW or r00640 or smc03008 SWALL:CHEW_RHIME (SWALL:Q52881) (155 aa) fasta scores: E(): 1.7e-05, 31.25% id in 144 aa; chemotaxis-related protein complement(2543905..2544639) Burkholderia pseudomallei K96243 3096913 YP_111878.1 CDS BPSS1873 NC_006351.1 2544620 2546674 R Similar to Ralstonia solanacearum methyltransferase rsp1647 or rs02206 SWALL:Q8XPJ3 (EMBL:AL646086) (466 aa) fasta scores: E(): 1.3e-45, 37.71% id in 684 aa, and to Myxococcus xanthus protein methyltransferase FrzF SWALL:FRZF_MYXXA (SWALL:P31759) (593 aa) fasta scores: E(): 7.1e-08, 27.28% id in 546 aa; chemotaxis-related methyltranferase complement(2544620..2546674) Burkholderia pseudomallei K96243 3096914 YP_111879.1 CDS BPSS1874 NC_006351.1 2546671 2547213 R Similar to Pseudomonas putida purine-binding chemotaxis protein CheW3 SWALL:Q93A55 (EMBL:AF430345) (168 aa) fasta scores: E(): 1.2e-08, 39.61% id in 154 aa, and to Pseudomonas aeruginosa CheW or pa1464 SWALL:O87130 (EMBL:AB012767) (159 aa) fasta scores: E(): 0.00051, 35.44% id in 79 aa; chemotaxis-related protein complement(2546671..2547213) Burkholderia pseudomallei K96243 3097197 YP_111880.1 CDS BPSS1875 NC_006351.1 2547224 2548900 R Similar to Pseudomonas aeruginosa probable chemotaxis transducer pa3708 SWALL:Q9HXT3 (EMBL:AE004789) (542 aa) fasta scores: E(): 1.4e-91, 57.51% id in 539 aa, and to Pseudomonas aeruginosa protein PilJ or pa0411 SWALL:PILJ_PSEAE (SWALL:P42257) (682 aa) fasta scores: E(): 4.5e-21, 27.94% id in 526 aa; chemotaxis-related protein complement(2547224..2548900) Burkholderia pseudomallei K96243 3097202 YP_111881.1 CDS BPSS1876 NC_006351.1 2549071 2550168 R N-terminal region similar to Pseudomonas aeruginosa probable two-component response regulator pa3702 SWALL:Q9HXT9 (EMBL:AE004789) (347 aa) fasta scores: E(): 3.7e-29, 64.92% id in 134 aa, C-terminal region to Caulobacter crescentus sensory box histidine kinase, cc3327 SWALL:Q9A377 (EMBL:AE005994) (761 aa) fasta scores: E(): 9.5e-22, 37.61% id in 226 aa, and in full length to Mycobacterium leprae sensor-like histidine kinase SenX3 or ml2440 or b2168_c3_247 SWALL:SEX3_MYCLE (SWALL:P54883) (443 aa) fasta scores: E(): 1.9e-15, 29.85% id in 335 aa; sensor kinase/response regulator fusion protein complement(2549071..2550168) Burkholderia pseudomallei K96243 3097203 YP_111882.1 CDS BPSS1876A NC_006351.1 2550617 2550940 D hypothetical protein 2550617..2550940 Burkholderia pseudomallei K96243 3097144 YP_111883.1 CDS BPSS1877 NC_006351.1 2550984 2551319 D hypothetical protein 2550984..2551319 Burkholderia pseudomallei K96243 3097145 YP_111884.1 CDS BPSS1878 NC_006351.1 2551599 2553032 R Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 5.2e-45, 36.61% id in 478 aa, and to Rhizobium sp. probable succinate-semialdehyde dehydrogenase [NADP+] GabD or y4sJ SWALL:GABD_RHISN (SWALL:P55653) (491 aa) fasta scores: E(): 1.6e-42, 34.51% id in 481 aa; dehydrogenase complement(2551599..2553032) Burkholderia pseudomallei K96243 3094893 YP_111885.1 CDS BPSS1879 NC_006351.1 2553124 2554764 R catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase complement(2553124..2554764) Burkholderia pseudomallei K96243 3097059 YP_111886.1 CDS BPSS1880 NC_006351.1 2555071 2556651 R Similar to Agrobacterium tumefaciens Na+/H+ antiporter atu3059 or agr_l_3497 SWALL:Q8UBF7 (EMBL:AE009236) (550 aa) fasta scores: E(): 7e-101, 53.2% id in 530 aa, and to Rhizobium loti Na+/H+ antiporter mll3064 SWALL:Q98H22 (EMBL:AP003001) (517 aa) fasta scores: E(): 8.4e-49, 36.46% id in 521 aa; Na+/H+ antiporter membrane protein complement(2555071..2556651) Burkholderia pseudomallei K96243 3097060 YP_111887.1 CDS BPSS1881 NC_006351.1 2556811 2558097 R Similar to Escherichia coli hypothetical protein YjiN or b4336 SWALL:YJIN_ECOLI (SWALL:P39385) (426 aa) fasta scores: E(): 1.1e-85, 54.34% id in 414 aa, and to Salmonella typhi membrane protein sty4873 SWALL:Q8Z0X2 (EMBL:AL627284) (423 aa) fasta scores: E(): 2.2e-85, 53.86% id in 414 aa; hypothetical protein complement(2556811..2558097) Burkholderia pseudomallei K96243 3096047 YP_111888.1 CDS BPSS1882 NC_006351.1 2558138 2558563 R Similar to Ralstonia solanacearum probable acetyltransferase rsp0265 or rs03701 SWALL:Q8XT50 (EMBL:AL646077) (184 aa) fasta scores: E(): 1.4e-07, 41.28% id in 109 aa, and to Myxococcus xanthus ActC SWALL:Q93P57 (EMBL:AF350253) (437 aa) fasta scores: E(): 1.7e-06, 37.31% id in 134 aa; acetyltransferase complement(2558138..2558563) Burkholderia pseudomallei K96243 3096183 YP_111889.1 CDS BPSS1883 NC_006351.1 2558842 2560494 D Similar to Xanthomonas axonopodis cardiolipin synthase Cls or xac2871 SWALL:AAM37716 (EMBL:AE011929) (520 aa) fasta scores: E(): 1.5e-61, 41.13% id in 530 aa, and to Pseudomonas aeruginosa hypothetical protein pa5310 SWALL:Q9HTP4 (EMBL:AE004943) (529 aa) fasta scores: E(): 1.7e-61, 40.15% id in 528 aa; hypothetical protein 2558842..2560494 Burkholderia pseudomallei K96243 3096184 YP_111890.1 CDS BPSS1884 NC_006351.1 2560561 2560977 R Similar to Ralstonia solanacearum HIT-like protein rsp0494 or rs00372 SWALL:Q8XSI0 (EMBL:AL646079) (144 aa) fasta scores: E(): 6.9e-29, 58.08% id in 136 aa, and to Caulobacter crescentus HIT family protein cc2470 SWALL:Q9A5H7 (EMBL:AE005916) (144 aa) fasta scores: E(): 7.9e-23, 50.72% id in 138 aa; hypothetical protein complement(2560561..2560977) Burkholderia pseudomallei K96243 3097008 YP_111891.1 CDS BPSS1885 NC_006351.1 2561180 2562421 R Similar to Rhodococcus erythropolis rhodocoxin reductase ThcD SWALL:THCD_RHOER (SWALL:P43494) (426 aa) fasta scores: E(): 1.7e-39, 37.1% id in 407 aa, and to Escherichia coli 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3) HcaD or PhdA or HcaA4 or b2542 SWALL:HCAD_ECOLI (SWALL:P77650) (400 aa) fasta scores: E(): 4.7e-38, 37.83% id in 407 aa; aromatic hydrocarbons catabolism-related reductase complement(2561180..2562421) Burkholderia pseudomallei K96243 3097009 YP_111892.1 CDS BPSS1886 NC_006351.1 2562408 2562737 R Similar to Pseudomonas aeruginosa naphthalene 1,2-dioxygenase system ferredoxin component NdoA or PahA2 SWALL:NDOA_PSEAE (SWALL:Q51493) (103 aa) fasta scores: E(): 2.8e-13, 44% id in 100 aa, and to Pseudomonas putida, and Pseudomonas sp. naphthalene 1,2-dioxygenase system ferredoxin component NdoA or NahAB or DoxA or NdoC1 SWALL:NDOA_PSEPU (SWALL:P23082) (103 aa) fasta scores: E(): 1.1e-12, 42.26% id in 97 aa; aromatic hydrocarbons catabolism-related dioxygenase complement(2562408..2562737) Burkholderia pseudomallei K96243 3094939 YP_111893.1 CDS BPSS1887 NC_006351.1 2562759 2563256 R Similar to Sphingomonas aromaticivorans small subunit aromatic oxygenase BphA2D SWALL:O85985 (EMBL:AF079317) (162 aa) fasta scores: E(): 7.8e-27, 50.36% id in 137 aa, and to Pseudomonas aeruginosa ortho-halobenzoate 1,2-dioxygenase beta-isp protein OhbA SWALL:Q9Z5W2 (EMBL:AF121970) (176 aa) fasta scores: E(): 8.4e-27, 48.36% id in 153 aa. Note: The N-terminal region of this CDS does not present similarities with the database matches hit by the rest of the CDS; aromatic oxygenase complement(2562759..2563256) Burkholderia pseudomallei K96243 3094896 YP_111894.1 CDS BPSS1888 NC_006351.1 2563271 2564527 R Similar to Sphingomonas aromaticivorans large subunit aromatic oxygenase BphA1C SWALL:O85993 (EMBL:AF079317) (420 aa) fasta scores: E(): 5e-83, 49.88% id in 419 aa, and to Pseudomonas aeruginosa O-halobenzoate 1,2-dioxygenase large subunit OhbA SWALL:Q93AD8 (EMBL:AF422937) (401 aa) fasta scores: E(): 8.3e-72, 46.34% id in 397 aa; aromatic oxygenase complement(2563271..2564527) Burkholderia pseudomallei K96243 3094897 YP_111895.1 CDS BPSS1889 NC_006351.1 2564727 2565767 D Similar to Ralstonia solanacearum probable transcription regulator protein rsc1832 or rs04267 SWALL:Q8XYC6 (EMBL:AL646067) (342 aa) fasta scores: E(): 1.7e-19, 33.62% id in 348 aa, and to Pseudomonas putida xylDLEGF operon transcriptional activator 1 XylS1 SWALL:XYS1_PSEPU (SWALL:Q04710) (321 aa) fasta scores: E(): 2.4e-14, 30.53% id in 298 aa. Possible alternative translational start sites.; AraC family transcriptional regulator 2564727..2565767 Burkholderia pseudomallei K96243 3097234 YP_111896.1 CDS BPSS1890 NC_006351.1 2565817 2566704 R Similar to Acinetobacter lwoffii probable cat1 operon transcriptional activator SWALL:CATR_ACILW (SWALL:O33945) (303 aa) fasta scores: E(): 5.3e-46, 47.29% id in 296 aa, and to Burkholderia sp. NK8 LysR-type transcriptional regulatory protein CbeR SWALL:Q9AQS6 (EMBL:AB024746) (306 aa) fasta scores: E(): 2.5e-53, 55.19% id in 279 aa; LysR family transcriptional regulator complement(2565817..2566704) Burkholderia pseudomallei K96243 3096978 YP_111897.1 CDS catB NC_006351.1 2566794 2567927 D Similar to Acinetobacter lwoffii muconate cycloisomerase I 1 CatB1 SWALL:CTB1_ACILW (SWALL:O33946) (379 aa) fasta scores: E(): 7.3e-80, 62.53% id in 371 aa, and to Burkholderia sp. TH2 cis,cis-muconate lactonizing enzyme CatB2 SWALL:BAC16768 (EMBL:AB035325) (395 aa) fasta scores: E(): 3.5e-92, 73.76% id in 343 aa; muconate cycloisomerase I 2566794..2567927 Burkholderia pseudomallei K96243 3096549 YP_111898.1 CDS catA NC_006351.1 2567962 2568864 D Similar to Acinetobacter lwoffii catechol 1,2-dioxygenase 2 CatA2 SWALL:CTA2_ACILW (SWALL:O33950) (275 aa) fasta scores: E(): 4.6e-84, 81.22% id in 261 aa, and to Burkholderia sp. TH2 catechol 1,2-dioxygenase CatA2 SWALL:BAC16769 (EMBL:AB035325) (300 aa) fasta scores: E(): 3.4e-90, 74.66% id in 300 aa; catechol 1,2-dioxygenase 2567962..2568864 Burkholderia pseudomallei K96243 3096516 YP_111899.1 CDS catC NC_006351.1 2568902 2569192 D Similar to Acinetobacter lwoffii muconolactone delta-isomerase 2 CatC2 SWALL:CTC2_ACILW (SWALL:O33951) (96 aa) fasta scores: E(): 2.9e-32, 80.2% id in 96 aa, and to Pseudomonas putida muconolactone delta-isomerase CatC SWALL:CATC_PSEPU (SWALL:P00948) (96 aa) fasta scores: E(): 4.4e-28, 73.95% id in 96 aa; muconolactone delta-isomerase 2568902..2569192 Burkholderia pseudomallei K96243 3096616 YP_111900.1 CDS cyoD NC_006351.1 2569312 2569644 R Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri cytochrome O ubiquinol oxidase CyoD or b0429 or z0532 or ecs0483 or sf0370 SWALL:CYOD_ECOLI (SWALL:P18403) (109 aa) fasta scores: E(): 2.7e-16, 49.5% id in 101 aa, and to Pseudomonas putida cytochrome O ubiquinol oxidase CyoD SWALL:CYOD_PSEPU (SWALL:Q9WWR4) (110 aa) fasta scores: E(): 2.7e-15, 42.72% id in 110 aa; cytochrome O ubiquinol oxidase complement(2569312..2569644) Burkholderia pseudomallei K96243 3096541 YP_111901.1 CDS cyoC NC_006351.1 2569645 2570238 R Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri cytochrome O ubiquinol oxidase subunit III CyoC or b0430 or c0541 or sf0371 SWALL:CYOC_ECOLI (SWALL:P18402) (204 aa) fasta scores: E(): 1.1e-41, 53.6% id in 194 aa, and to Pseudomonas putida cytochrome O ubiquinol oxidase subunit III CyoC SWALL:CYOC_PSEPU (SWALL:Q9WWR3) (207 aa) fasta scores: E(): 5.3e-44, 55.72% id in 192 aa; cytochrome O ubiquinol oxidase subunit III complement(2569645..2570238) Burkholderia pseudomallei K96243 3096540 YP_111902.1 CDS cyoB NC_006351.1 2570253 2572265 R Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ubiquinol oxidase polypeptide I CyoB or b0431 or c0542 or z0534 or ecs0485 SWALL:CYOB_ECOLI (SWALL:P18401) (663 aa) fasta scores: E(): 1.5e-189, 67.22% id in 653 aa, and to Acetobacter aceti ubiquinol oxidase polypeptide I precursor CyaA SWALL:QOX1_ACEAC (SWALL:P98009) (664 aa) fasta scores: E(): 4.4e-197, 69.06% id in 666 aa; ubiquinol oxidase polypeptide I complement(2570253..2572265) Burkholderia pseudomallei K96243 3096522 YP_111903.1 CDS cyoA NC_006351.1 2572268 2573155 R Similar to Escherichia coli, and Escherichia coli O6 ubiquinol oxidase polypeptide II precursor CyoA or b0432 or c0543 SWALL:CYOA_ECOLI (SWALL:P18400) (315 aa) fasta scores: E(): 6e-66, 55.9% id in 288 aa, and to Acetobacter aceti ubiquinol oxidase polypeptide II precursor CyaB SWALL:QOX2_ACEAC (SWALL:P50653) (307 aa) fasta scores: E(): 7.3e-73, 63.76% id in 287 aa; ubiquinol oxidase polypeptide II precursor complement(2572268..2573155) Burkholderia pseudomallei K96243 3096608 YP_111904.1 CDS fadH NC_006351.1 2573880 2575913 R Similar to Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] FadH or b3081 SWALL:FADH_ECOLI (SWALL:P42593) (671 aa) fasta scores: E(): 3e-151, 60.71% id in 672 aa, and to Pseudomonas aeruginosa 2,4-dienoyl-CoA reductase FadH1 or pa3092 SWALL:Q9HZB6 (EMBL:AE004733) (679 aa) fasta scores: E(): 4.9e-170, 65.73% id in 677 aa; 2,4-dienoyl-CoA reductase complement(2573880..2575913) Burkholderia pseudomallei K96243 3094934 YP_111905.1 CDS BPSS1899 NC_006351.1 2576063 2577115 D Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 2.5e-27, 33.23% id in 346 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.7e-20, 29.88% id in 338 aa; AraC family transcriptional regulator 2576063..2577115 Burkholderia pseudomallei K96243 3096979 YP_111906.1 CDS BPSS1900 NC_006351.1 2577069 2578016 R Similar to Xanthomonas axonopodis transcriptional regulator LysR family xac4038 SWALL:Q8PFE5 (EMBL:AE012052) (304 aa) fasta scores: E(): 2e-63, 62.45% id in 293 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu2191 or agr_c_3985 SWALL:Q8UDD6 (EMBL:AE009170) (314 aa) fasta scores: E(): 5.2e-57, 53.87% id in 310 aa; LysR family transcriptional regulator complement(2577069..2578016) Burkholderia pseudomallei K96243 3095653 YP_111907.1 CDS BPSS1901 NC_006351.1 2578111 2579112 D Similar to Xanthomonas axonopodis hypothetical protein xac4039 SWALL:Q8PFE4 (EMBL:AE012052) (330 aa) fasta scores: E(): 2.2e-79, 64.48% id in 321 aa, and to Ralstonia solanacearum hypothetical protein rsc3335 or rs02569 SWALL:Q8XU58 (EMBL:AL646074) (318 aa) fasta scores: E(): 9.4e-70, 59.04% id in 315 aa; hypothetical protein 2578111..2579112 Burkholderia pseudomallei K96243 3095654 YP_111908.1 CDS BPSS1902 NC_006351.1 2579291 2580205 R Similar to Burkholderia sp. NK8 LysR-type transcriptional regulatory protein CbeR SWALL:Q9AQS6 (EMBL:AB024746) (306 aa) fasta scores: E(): 2.8e-94, 83.05% id in 301 aa, and to Acinetobacter calcoaceticus ben and cat operon transcriptional regulator BenM SWALL:BENM_ACICA (SWALL:O68014) (304 aa) fasta scores: E(): 8.9e-54, 47.69% id in 304 aa; LysR family transcriptional regulator complement(2579291..2580205) Burkholderia pseudomallei K96243 3096458 YP_111909.1 CDS benA NC_006351.1 2580429 2581796 D Similar to Acinetobacter calcoaceticus benzoate 1,2-dioxygenase alpha subunit BenA SWALL:BENA_ACICA (SWALL:P07769) (461 aa) fasta scores: E(): 2.6e-150, 74.65% id in 438 aa, and to Pseudomonas putida benzoate 1,2-dioxygenase large subunit BenA SWALL:Q93SR8 (EMBL:AY026914) (455 aa) fasta scores: E(): 1.8e-142, 73.68% id in 437 aa; benzoate 1,2-dioxygenase subunit alpha 2580429..2581796 Burkholderia pseudomallei K96243 3096099 YP_111910.1 CDS benB NC_006351.1 2581793 2582284 D Similar to Acinetobacter calcoaceticus benzoate 1,2-dioxygenase beta subunit BenB SWALL:BENB_ACICA (SWALL:P07770) (169 aa) fasta scores: E(): 1.8e-48, 71.16% id in 163 aa, and to Pseudomonas putida benzoate 1,2-dioxygenase small subunit BenB SWALL:Q93SR7 (EMBL:AY026914) (162 aa) fasta scores: E(): 1.3e-42, 66.45% id in 155 aa; benzoate 1,2-dioxygenase subunit beta 2581793..2582284 Burkholderia pseudomallei K96243 3097134 YP_111911.1 CDS benC NC_006351.1 2582328 2583347 D with BenAB catalyzes the formation of 2-hydro-1,2-dihydroxybenzoate from benzoate; benzoate 1,2-dioxygenase ferredoxin reductase subunit 2582328..2583347 Burkholderia pseudomallei K96243 3097135 YP_111912.1 CDS benD NC_006351.1 2583344 2584138 D catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 2583344..2584138 Burkholderia pseudomallei K96243 3096088 YP_111913.1 CDS BPSS1907 NC_006351.1 2584182 2585090 R Similar to Caulobacter crescentus carboxylesterase cc2298 SWALL:Q9A5Z9 (EMBL:AE005900) (289 aa) fasta scores: E(): 3.6e-36, 43.94% id in 289 aa, and to Xanthomonas campestris carboxylesterase xcc2285 SWALL:Q8P8F7 (EMBL:AE012336) (291 aa) fasta scores: E(): 7.3e-32, 44.07% id in 270 aa; hypothetical protein complement(2584182..2585090) Burkholderia pseudomallei K96243 3095515 YP_111914.1 CDS BPSS1908 NC_006351.1 2585463 2585948 D Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3067 SWALL:Q9HZE1 (EMBL:AE004731) (147 aa) fasta scores: E(): 3.7e-41, 80.82% id in 146 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv0880 or mt0903.1 or mtcy31.08 SWALL:Y880_MYCTU (SWALL:Q10542) (143 aa) fasta scores: E(): 4.2e-09, 36.23% id in 138 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; MarR family transcriptional regulator 2585463..2585948 Burkholderia pseudomallei K96243 3095516 YP_111915.1 CDS BPSS1909 NC_006351.1 2585945 2586517 D Similar to Pseudomonas aeruginosa hypothetical protein pa3066 SWALL:Q9HZE2 (EMBL:AE004731) (190 aa) fasta scores: E(): 1e-53, 75.26% id in 190 aa, and to Ralstonia solanacearum hydrolase rsp0438 or rs00897 SWALL:Q8XSM9 (EMBL:AL646078) (197 aa) fasta scores: E(): 2.8e-10, 35.17% id in 145 aa; hypothetical protein 2585945..2586517 Burkholderia pseudomallei K96243 3096412 YP_111916.1 CDS BPSS1910 NC_006351.1 2586540 2587592 D Similar to Pseudomonas aeruginosa hypothetical protein pa3065 SWALL:Q9HZE3 (EMBL:AE004731) (328 aa) fasta scores: E(): 8e-70, 63.6% id in 327 aa; hypothetical protein 2586540..2587592 Burkholderia pseudomallei K96243 3096199 YP_111917.1 CDS BPSS1911 NC_006351.1 2588240 2589724 D hypothetical protein 2588240..2589724 Burkholderia pseudomallei K96243 3096200 YP_111918.1 CDS tnpA NC_006351.1 2589898 2591118 R Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 6.2e-138, 78.07% id in 406 aa, and to Ralstonia solanacearum ISrso15-transposase rsp1547 or rs02103 or rsc2573 or rs00774 SWALL:Q8XFK1 (EMBL:AL646085) (406 aa) fasta scores: E(): 8.5e-161, 91.62% id in 406 aa; IS1001 transposase complement(2589898..2591118) Burkholderia pseudomallei K96243 3096848 YP_111919.1 CDS lysP NC_006351.1 2591285 2592847 R Similar to Escherichia coli lysine-specific permease LysP or CadR (WALL:P25737) (488 aa) fasta scores: E(): 5.6e-145, 75.05% id in 477 aa, and to Ralstonia solanacearum probable lysine-specific permease transmembrane protein rsc1758 or rs02945 SWALL:Q8XYK0 (EMBL:AL646066) (512 aa) fasta scores: E(): 1.5e-152, 78.79% id in 481 aa; lysine-specific permease complement(2591285..2592847) Burkholderia pseudomallei K96243 3097029 YP_111920.1 CDS BPSS1914 NC_006351.1 2593487 2594377 R Similar to Pseudomonas aeruginosa hypothetical protein pa1542 SWALL:Q9I3H1 (EMBL:AE004582) (278 aa) fasta scores: E(): 5.1e-33, 39.2% id in 278 aa, and to Ralstonia solanacearum hypothetical protein rsp1030 or rs02367 SWALL:Q8XR38 (EMBL:AL646082) (250 aa) fasta scores: E(): 2.7e-09, 29.63% id in 243 aa; hypothetical protein complement(2593487..2594377) Burkholderia pseudomallei K96243 3096552 YP_111921.1 CDS BPSS1915 NC_006351.1 2595091 2596470 D Similar to Pseudomonas putida metallo-beta-lactamase pp3291 SWALL:AAN68898 (EMBL:AE016786) (455 aa) fasta scores: E(): 5.1e-93, 54.48% id in 457 aa, and to Chlorobium tepidum metallo-beta-lactamase superfamily protein ct0598 SWALL:Q8KET4 (EMBL:AE012833) (469 aa) fasta scores: E(): 3e-57, 38.01% id in 463 aa; metallo-beta-lactamase 2595091..2596470 Burkholderia pseudomallei K96243 3096553 YP_111922.1 CDS phbB NC_006351.1 2597063 2597809 R Similar to Alcaligenes eutrophus acetoacetyl-CoA reductase PhbB SWALL:PHBB_ALCEU (SWALL:P14697) (246 aa) fasta scores: E(): 2.4e-46, 55.32% id in 244 aa, and to Zoogloea ramigera acetoacetyl-CoA reductase PhbB SWALL:PHBB_ZOORA (SWALL:P23238) (241 aa) fasta scores: E(): 3.9e-42, 53.25% id in 246 aa; acetoacetyl-CoA reductase complement(2597063..2597809) Burkholderia pseudomallei K96243 3095326 YP_111923.1 CDS BPSS1917 NC_006351.1 2598474 2599256 D Similar to Ralstonia solanacearum probable transcription regulator protein rsc0190 or rs00622 SWALL:Q8Y2Z1 (EMBL:AL646057) (266 aa) fasta scores: E(): 5e-49, 51.75% id in 257 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri fumarate and nitrate reduction regulatory protein Fnr or NirR or b1334 or c1807 or z2433 or ecs1915 or sf1836 SWALL:FNR_ECOLI (SWALL:P03019) (250 aa) fasta scores: E(): 1.2e-33, 39.38% id in 226 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; Crp/Fnr family transcriptional regulator 2598474..2599256 Burkholderia pseudomallei K96243 3097133 YP_111924.1 CDS BPSS1918 NC_006351.1 2599462 2600448 R Similar to Ralstonia solanacearum probable alcohol dehydrogenase-like oxidoreductase rsc1505 or rs03800 SWALL:Q8XZ99 (EMBL:AL646064) (334 aa) fasta scores: E(): 4.3e-81, 66.26% id in 329 aa, and to Bacillus stearothermophilus alcohol dehydrogenase SWALL:ADH3_BACST (SWALL:P42328) (339 aa) fasta scores: E(): 8.8e-32, 34.02% id in 338 aa; alcohol dehydrogenase complement(2599462..2600448) Burkholderia pseudomallei K96243 3096927 YP_111925.1 CDS BPSS1919 NC_006351.1 2600448 2600675 R hypothetical protein complement(2600448..2600675) Burkholderia pseudomallei K96243 3096928 YP_111926.1 CDS BPSS1920 NC_006351.1 2601413 2601841 D hypothetical protein 2601413..2601841 Burkholderia pseudomallei K96243 3097074 YP_111927.1 CDS BPSS1921 NC_006351.1 2602227 2602550 R hypothetical protein complement(2602227..2602550) Burkholderia pseudomallei K96243 3097232 YP_111928.1 CDS BPSS1922 NC_006351.1 2602830 2603777 D Similar to Brucella melitensis 3-isopropylmalate dehydrogenase bmeii0271 SWALL:Q8YDA7 (EMBL:AE009665) (276 aa) fasta scores: E(): 1.5e-37, 44.36% id in 284 aa, and to Caulobacter crescentus hypothetical protein cc0810 SWALL:Q9AA01 (EMBL:AE005757) (260 aa) fasta scores: E(): 6.7e-37, 48.47% id in 262 aa. Possible alternative translational start site after codon 23; hypothetical protein 2602830..2603777 Burkholderia pseudomallei K96243 3097233 YP_111929.1 CDS BPSS1923 NC_006351.1 2604114 2604503 D hypothetical protein 2604114..2604503 Burkholderia pseudomallei K96243 3096349 YP_111930.1 CDS BPSS1924 NC_006351.1 2605105 2605755 R Similar to Ralstonia solanacearum hypothetical protein rsc0189 or rs00621 SWALL:Q8Y2Z2 (EMBL:AL646057) (215 aa) fasta scores: E(): 5.2e-36, 51.64% id in 213 aa, and to Escherichia coli, and Escherichia coli O6 osmotically inducible protein Y precursor OsmY or b4376 or c5457 SWALL:OSMY_ECOLI (SWALL:P27291) (201 aa) fasta scores: E(): 0.0034, 28.33% id in 180 aa; hypothetical protein complement(2605105..2605755) Burkholderia pseudomallei K96243 3096350 YP_111931.1 CDS BPSS1925 NC_006351.1 2606114 2607292 R hypothetical protein complement(2606114..2607292) Burkholderia pseudomallei K96243 3095579 YP_111932.1 CDS BPSS1926 NC_006351.1 2607590 2608234 R Similar to Bacillus halodurans probable adenylylsulfate kinase bh1489 SWALL:CYC1_BACHD (SWALL:Q9KCT0) (202 aa) fasta scores: E(): 1e-31, 48.24% id in 199 aa, and to Klebsiella aerogenes APS kinase CysC SWALL:Q9EYY1 (EMBL:AF308468) (201 aa) fasta scores: E(): 2.1e-29, 49.73% id in 189 aa; denylylsulfate kinase complement(2607590..2608234) Burkholderia pseudomallei K96243 3095059 YP_111933.1 CDS BPSS1927 NC_006351.1 2608475 2610166 R Similar to C-terminal region similar to C-terminal region of Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 1.7e-49, 47.9% id in 405 aa, and full length similar to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 2.9e-63, 43.33% id in 540 aa; methyl-accepting chemotaxis protein complement(2608475..2610166) Burkholderia pseudomallei K96243 3095060 YP_111934.1 CDS BPSS1928 NC_006351.1 2611158 2611997 D Weakly similar to Streptomyces coelicolor polysaccharide deacetylase sco2710 or scc61a.31 SWALL:Q9KYG2 (EMBL:AL939113) (229 aa) fasta scores: E(): 4.1e-06, 28.21% id in 241 aa, and to Staphylococcus caprae IcaB SWALL:Q9AIQ6 (EMBL:AF246926) (289 aa) fasta scores: E(): 5.9e-06, 21.79% id in 234 aa; hypothetical protein 2611158..2611997 Burkholderia pseudomallei K96243 3097076 YP_111935.1 CDS BPSS1929 NC_006351.1 2612032 2613516 R Similar to Chlorobium tepidum ABC-type export system, outer membrane channel protein ct0554 SWALL:AAM71796 (EMBL:AE012830) (500 aa) fasta scores: E(): 9.1e-73, 47.88% id in 472 aa, and to Ralstonia solanacearum probable outer membrane channel lipoprotein rsc0166 or rs01036 SWALL:Q8Y315 (EMBL:AL646057) (480 aa) fasta scores: E(): 7.8e-59, 44% id in 475 aa; outer membrane lipoprotein complement(2612032..2613516) Burkholderia pseudomallei K96243 3096360 YP_111936.1 CDS BPSS1930 NC_006351.1 2613494 2614579 R Similar to Chlorobium tepidum ABC-type export system, membrane fusion protein ct0553 SWALL:AAM71795 (EMBL:AE012830) (314 aa) fasta scores: E(): 1.8e-24, 46.92% id in 358 aa, and to Escherichia coli hypothetical membrane protein YbhG or b0795 SWALL:YBHG_ECOLI (SWALL:P75777) (332 aa) fasta scores: E(): 1.9e-07, 30.1% id in 299 aa; ABC transport system, exported protein complement(2613494..2614579) Burkholderia pseudomallei K96243 3096361 YP_111937.1 CDS BPSS1931 NC_006351.1 2614576 2615274 R Similar to Chlorobium tepidum ABC-type export system, ATP-binding subunit ct0552 SWALL:AAM71794 (EMBL:AE012830) (239 aa) fasta scores: E(): 2.7e-53, 68.26% id in 230 aa, and to Bacillus halodurans ABC transporter bh2699 SWALL:Q9K9E9 (EMBL:AP001516) (251 aa) fasta scores: E(): 4e-25, 38.46% id in 221 aa; ABC transporter ATP-binding protein complement(2614576..2615274) Burkholderia pseudomallei K96243 3095608 YP_111938.1 CDS BPSS1932 NC_006351.1 2615277 2616413 R Similar to Chlorobium tepidum ABC-type export system, membrane protein ct0551 SWALL:AAM71793 (EMBL:AE012830) (384 aa) fasta scores: E(): 1e-92, 64.28% id in 378 aa, and to Deinococcus radiodurans hypothetical protein dr0474 SWALL:Q9RX41 (EMBL:AE001906) (386 aa) fasta scores: E(): 2.5e-07, 24.61% id in 386 aa; ABC transporter membrane protein complement(2615277..2616413) Burkholderia pseudomallei K96243 3095609 YP_111939.1 CDS BPSS1933 NC_006351.1 2616410 2616661 R hypothetical protein complement(2616410..2616661) Burkholderia pseudomallei K96243 3097159 YP_111940.1 CDS BPSS1934 NC_006351.1 2616694 2617164 R Similar to Ralstonia solanacearum hypothetical protein rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 1.5e-20, 49.66% id in 147 aa, and to Methanosarcina acetivorans universal stress protein ma4094 SWALL:Q8TIP8 (EMBL:AE011122) (153 aa) fasta scores: E(): 3.5e-11, 37.33% id in 150 aa. Note There is a possible alternative start codon 45 amino acid residues upstream; universal stress protein complement(2616694..2617164) Burkholderia pseudomallei K96243 3096674 YP_111941.1 CDS BPSS1935 NC_006351.1 2617380 2618246 R Similar to the N-terminal region of Ralstonia solanacearum transcription regulator protein rsp1164 or rs05643 SWALL:Q8XQQ7 (EMBL:AL646083) (233 aa) fasta scores: E(): 2e-05, 57.53% id in 73 aa, and very low similarity to the full length Rhizobium loti transcriptional regulator mll4816 SWALL:Q98D84 (EMBL:AP003005) (244 aa) fasta scores: E(): 0.047, 27.14% id in 221 aa; TetR family transcriptional regulator complement(2617380..2618246) Burkholderia pseudomallei K96243 3096675 YP_111942.1 CDS BPSS1936 NC_006351.1 2618540 2620066 D Similar to Caulobacter crescentus efflux system protein cc0806 SWALL:Q9AA05 (EMBL:AE005757) (467 aa) fasta scores: E(): 3.7e-62, 44.9% id in 461 aa, and to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.7e-61, 42.56% id in 484 aa. CDS is extended at the N-terminus in comparison to orthologues; outer membrane efflux protein 2618540..2620066 Burkholderia pseudomallei K96243 3096705 YP_111943.1 CDS BPSS1937 NC_006351.1 2620063 2621136 D Similar to Pseudomonas aeruginosa hypothetical protein pa5232 SWALL:Q9HTV8 (EMBL:AE004935) (357 aa) fasta scores: E(): 4.4e-67, 60.51% id in 352 aa, and to Escherichia coli hypothetical protein precursor YhiI or b3487 SWALL:YHII_ECOLI (SWALL:P37626) (355 aa) fasta scores: E(): 1.3e-63, 58.4% id in 351 aa; ABC transport system, exported protein 2620063..2621136 Burkholderia pseudomallei K96243 3097157 YP_111944.1 CDS BPSS1938 NC_006351.1 2621133 2624357 D Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YhiH or b3486 SWALL:YHIH_ECOLI (SWALL:P37624) (894 aa) fasta scores: E(): 2.2e-102, 56.16% id in 1063 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu4667 or agr_l_430 SWALL:Q8U6Y9 (EMBL:AE009395) (930 aa) fasta scores: E(): 1.4e-101, 55.46% id in 1071 aa. Note: This CDS presents no similarities in the database matches between approx. residue 510 and approx. residue 690; ABC transporter ATP-binding protein 2621133..2624357 Burkholderia pseudomallei K96243 3097158 YP_111945.1 CDS BPSS1939 NC_006351.1 2624360 2625484 D Similar to Escherichia coli, and Shigella flexneri hypothetical protein YhhJ or b3485 or sf3501 SWALL:YHHJ_ECOLI (SWALL:P31993) (374 aa) fasta scores: E(): 8.7e-92, 61.76% id in 374 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa5230 SWALL:Q9HTW0 (EMBL:AE004935) (374 aa) fasta scores: E(): 6.6e-91, 63.1% id in 374 aa; ABC transporter membrane protein 2624360..2625484 Burkholderia pseudomallei K96243 3095122 YP_111946.1 CDS BPSS1940 NC_006351.1 2625634 2627469 D Similar to Caulobacter crescentus sensory box histidine kinase/response regulator cc3225 SWALL:Q9A3H9 (EMBL:AE005986) (731 aa) fasta scores: E(): 9.5e-57, 35.17% id in 688 aa, and to Pseudomonas putida sensor histidine kinase/response regulator pp3651 SWALL:AAN69251 (EMBL:AE016787) (727 aa) fasta scores: E(): 6.1e-51, 33.19% id in 729 aa; sensor kinase/response regulator fusion protein 2625634..2627469 Burkholderia pseudomallei K96243 3095123 YP_111947.1 CDS BPSS1941 NC_006351.1 2627825 2629390 R Similar to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 4.1e-44, 42.75% id in 414 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transducer transmembrane protein rsp1099 or rs02605 SWALL:Q8XQW9 (EMBL:AL646082) (513 aa) fasta scores: E(): 2.4e-84, 50.09% id in 515 aa; methyl-accepting chemotaxis transducer transmembrane protein complement(2627825..2629390) Burkholderia pseudomallei K96243 3097050 YP_111948.1 CDS BPSS1942 NC_006351.1 2629931 2630440 D Similar to Ralstonia solanacearum probable transmembrane protein rsc0339 or rs03306 SWALL:Q8Y2J6 (EMBL:AL646058) (171 aa) fasta scores: E(): 4.6e-23, 46.78% id in 171 aa, and to Xanthomonas campestris hypothetical protein xcc3810 SWALL:AAM43484 (EMBL:AE012502) (165 aa) fasta scores: E(): 4.5e-13, 36% id in 150 aa; hypothetical protein 2629931..2630440 Burkholderia pseudomallei K96243 3097136 YP_111949.1 CDS BPSS1943 NC_006351.1 2630498 2631001 R hypothetical protein complement(2630498..2631001) Burkholderia pseudomallei K96243 3097137 YP_111950.1 CDS adhA NC_006351.1 2631078 2632103 R Similar to Rhizobium meliloti alcohol dehydrogenase AdhA or ra0704 or sma1296 SWALL:ADHA_RHIME (SWALL:O31186) (340 aa) fasta scores: E(): 3e-84, 64.37% id in 334 aa, and to Brucella melitensis alcohol dehydrogenase bmei1746 SWALL:Q8YEY1 (EMBL:AE009608) (373 aa) fasta scores: E(): 4.7e-95, 72.35% id in 340 aa; alcohol dehydrogenase complement(2631078..2632103) Burkholderia pseudomallei K96243 3096266 YP_111951.1 CDS atpG NC_006351.1 2632318 2633166 R Similar to Thiobacillus ferrooxidans ATP synthase gamma chain AtpG SWALL:ATPG_THIFE (SWALL:P41169) (298 aa) fasta scores: E(): 4.9e-06, 24.91% id in 281 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri ATP synthase gamma chain AtpG or UncG or PapC or b3733 or c4659 or z5231 or ecs4675 or sf3813 SWALL:ATPG_ECOLI (SWALL:P00837) (287 aa) fasta scores: E(): 0.00014, 22.66% id in 278 aa; ATP synthase subunit gamma complement(2632318..2633166) Burkholderia pseudomallei K96243 3097127 YP_111952.1 CDS atpA NC_006351.1 2633163 2635163 R produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha complement(2633163..2635163) Burkholderia pseudomallei K96243 3096069 YP_111953.1 CDS BPSS1947 NC_006351.1 2635147 2635896 R Similar to the N-terminal region of Methanosarcina barkeri ATP synthase B subunit AtpF SWALL:O31081 (EMBL:AF028006) (386 aa) fasta scores: E(): 3.2e-08, 26.98% id in 252 aa, and of Methanosarcina acetivorans H(+)-transporting ATP synthase, subunit B ma2435 SWALL:Q8TN58 (EMBL:AE010936) (329 aa) fasta scores: E(): 2.8e-07, 26.12% id in 245 aa; ATP synthase subunit B complement(2635147..2635896) Burkholderia pseudomallei K96243 3096663 YP_111954.1 CDS atpE NC_006351.1 2635910 2636158 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(2635910..2636158) Burkholderia pseudomallei K96243 3095796 YP_111955.1 CDS BPSS1949 NC_006351.1 2636155 2636856 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(2636155..2636856) Burkholderia pseudomallei K96243 3096761 YP_111956.1 CDS BPSS1950 NC_006351.1 2636853 2637152 R hypothetical protein complement(2636853..2637152) Burkholderia pseudomallei K96243 3096762 YP_111957.1 CDS BPSS1951 NC_006351.1 2637154 2637630 R Very low similarity to Methanosarcina barkeri ATP synthase gene 1 AtpI SWALL:O31077 (EMBL:AF028006) (112 aa) fasta scores: E(): 0.0029, 27% id in 100 aa, and to Chlorobium tepidum ATP synthase, ct1031 SWALL:AAM72264 (EMBL:AE012866) (107 aa) fasta scores: E(): 0.0093, 25.77% id in 97 aa; ATP synthesis-related protein complement(2637154..2637630) Burkholderia pseudomallei K96243 3096854 YP_111958.1 CDS BPSS1952 NC_006351.1 2637651 2638106 R produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit epsilon complement(2637651..2638106) Burkholderia pseudomallei K96243 3096855 YP_111959.1 CDS atpD NC_006351.1 2638096 2639631 R produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta complement(2638096..2639631) Burkholderia pseudomallei K96243 3096070 YP_111960.1 CDS BPSS1954 NC_006351.1 2640073 2641866 D Similar to Azorhizobium caulinodans poly-beta-hydroxybutyrate polymerase PhbC SWALL:PHBC_AZOCA (SWALL:O66392) (583 aa) fasta scores: E(): 2e-73, 40.23% id in 517 aa, and to Methylobacterium extorquens poly(3-hydroxyalkanoate) polymerase PhaC SWALL:PHAC_METEX (SWALL:P52070) (605 aa) fasta scores: E(): 1e-72, 40.74% id in 535 aa; polymerase 2640073..2641866 Burkholderia pseudomallei K96243 3095531 YP_111961.1 CDS BPSS1955 NC_006351.1 2641877 2643280 D Catalyses the synthesis of acetylphosphate from acetyl-CoA and inorganic phosphate; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 2641877..2643280 Burkholderia pseudomallei K96243 3095722 YP_111962.1 CDS BPSS1956 NC_006351.1 2643277 2644455 D Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation; acetate kinase 2643277..2644455 Burkholderia pseudomallei K96243 3095723 YP_111963.1 CDS BPSS1957 NC_006351.1 2645187 2646128 R Similar to Escherichia coli 6-phosphofructokinase isozyme 2 PfkB or b1723 SWALL:K6P2_ECOLI (SWALL:P06999) (309 aa) fasta scores: E(): 1.8e-31, 39.48% id in 309 aa, and to Salmonella typhimurium 6-phosphofructokinase II Pfkb or stm1326 SWALL:Q8ZPT5 (EMBL:AE008757) (310 aa) fasta scores: E(): 7e-32, 39.15% id in 309 aa; 6-phosphofructokinase complement(2645187..2646128) Burkholderia pseudomallei K96243 3095075 YP_111964.1 CDS BPSS1958 NC_006351.1 2646621 2647268 R Similar to Ralstonia solanacearum hypothetical protein rsc0189 or rs00621 SWALL:Q8Y2Z2 (EMBL:AL646057) (215 aa) fasta scores: E(): 1e-29, 46.75% id in 216 aa, and very low similarity to Escherichia coli, and Escherichia coli O6 osmotically inducible protein Y precursor OsmY or b4376 or c5457 SWALL:OSMY_ECOLI (SWALL:P27291) (201 aa) fasta scores: E(): 0.00021, 31.72% id in 145 aa; hypothetical protein complement(2646621..2647268) Burkholderia pseudomallei K96243 3096375 YP_111965.1 CDS cdd NC_006351.1 2647883 2648275 R Similar to Bacillus subtilis cytidine deaminase Cdd SWALL:CDD_BACSU (SWALL:P19079) (136 aa) fasta scores: E(): 3.4e-25, 55.9% id in 127 aa, and to Thermoanaerobacter tengcongensis cytidine deaminase tte0462 SWALL:Q8RCG7 (EMBL:AE013017) (135 aa) fasta scores: E(): 6.1e-27, 58.4% id in 125 aa; cytidine deaminase complement(2647883..2648275) Burkholderia pseudomallei K96243 3096617 YP_111966.1 CDS deoA NC_006351.1 2648584 2649906 R Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase complement(2648584..2649906) Burkholderia pseudomallei K96243 3097221 YP_111967.1 CDS BPSS1961 NC_006351.1 2650594 2650773 D hypothetical protein 2650594..2650773 Burkholderia pseudomallei K96243 3096376 YP_111968.1 CDS deoC NC_006351.1 2651073 2651855 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(2651073..2651855) Burkholderia pseudomallei K96243 3096510 YP_111969.1 CDS BPSS1963 NC_006351.1 2651869 2653143 R Similar to Yersinia pestis Na+ dependent nucleoside transporter-family protein ypo0435 SWALL:Q8ZIQ5 (EMBL:AJ414142) (423 aa) fasta scores: E(): 3.7e-85, 57.68% id in 423 aa, and to Escherichia coli hypothetical transport protein YeiM or b2164 SWALL:YEIM_ECOLI (SWALL:P33024) (416 aa) fasta scores: E(): 1.3e-81, 55.18% id in 424 aa; nucleoside transport related membrane protein complement(2651869..2653143) Burkholderia pseudomallei K96243 3095752 YP_111970.1 CDS BPSS1964 NC_006351.1 2653661 2654914 R Similar to Pseudomonas aeruginosa hypothetical protein pa3036 SWALL:Q9HZH2 (EMBL:AE004728) (310 aa) fasta scores: E(): 2.6e-45, 49.19% id in 311 aa, and to Rhizobium meliloti hypothetical protein rb0009 or smb20006 SWALL:Q92XF2 (EMBL:AL603642) (317 aa) fasta scores: E(): 3.5e-41, 48.14% id in 297 aa. Note: C-terminal region presents no simi;arities to any of the database macthes and contains repeat regions; hypothetical protein complement(2653661..2654914) Burkholderia pseudomallei K96243 3095753 YP_111971.1 CDS BPSS1965 NC_006351.1 2655043 2655687 R Similar to Pseudomonas putida glutathione S-transferase pp1162 SWALL:AAN66786 (EMBL:AE016778) (209 aa) fasta scores: E(): 5.7e-46, 63.18% id in 201 aa, and to Rhizobium leguminosarum GstA protein SWALL:GSTA_RHILE (SWALL:Q52828) (203 aa) fasta scores: E(): 1.6e-41, 57.5% id in 200 aa; glutathione S-transferase complement(2655043..2655687) Burkholderia pseudomallei K96243 3095850 YP_111972.1 CDS BPSS1966 NC_006351.1 2655961 2656866 D Similar to Pseudomonas aeruginosa transcriptional regulator PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 4.6e-30, 39.73% id in 297 aa, and to Rhizobium loti transcriptional regulator mlr3418 SWALL:Q98GA5 (EMBL:AP003001) (311 aa) fasta scores: E(): 4.2e-38, 43.68% id in 293 aa; LysR family transcriptional regulator 2655961..2656866 Burkholderia pseudomallei K96243 3095916 YP_111973.1 CDS BPSS1967 NC_006351.1 2657077 2657730 R Similar to Streptomyces coelicolor TetR-family transcriptional regulator sco0745 or scf81.04C SWALL:Q9RJE7 (EMBL:AL939106) (219 aa) fasta scores: E(): 4.2e-05, 28.64% id in 192 aa, and to Mycobacterium tuberculosis hypothetical protein rv0825c rv0825c or mt0847 or mtv043.17C SWALL:O53836 (EMBL:AL022004) (239 aa) fasta scores: E(): 5.2e-05, 29.06% id in 203 aa; TetR family transcriptional regulator complement(2657077..2657730) Burkholderia pseudomallei K96243 3095917 YP_111974.1 CDS BPSS1968 NC_006351.1 2657833 2658741 D Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1537 SWALL:Q9I3H6 (EMBL:AE004582) (295 aa) fasta scores: E(): 1.1e-54, 52.57% id in 291 aa, and to Mycobacterium tuberculosis oxidoreductase rv3085 or mtv013.06 or mt3170 SWALL:O53302 (EMBL:AL021309) (276 aa) fasta scores: E(): 1.4e-44, 48.18% id in 276 aa; dehydrogenase 2657833..2658741 Burkholderia pseudomallei K96243 3096358 YP_111975.1 CDS BPSS1969 NC_006351.1 2658738 2660336 D Similar to Caulobacter crescentus monooxygenase, flavin-binding family cc2569 SWALL:Q9A588 (EMBL:AE005925) (498 aa) fasta scores: E(): 4.8e-120, 61% id in 500 aa, and to Emericella nidulans sterigmatocystin biosynthesis monooxygenase StcW SWALL:STCW_EMENI (SWALL:Q00730) (488 aa) fasta scores: E(): 7.6e-17, 23.7% id in 443 aa. CDS is extended at the N-terminus in comparison to orthologues; monooxygenase 2658738..2660336 Burkholderia pseudomallei K96243 3096359 YP_111976.1 CDS BPSS1970 NC_006351.1 2660333 2661316 D Similar to Pseudomonas fluorescens lactone-specific esterase EstF1 SWALL:O87637 (EMBL:AF090329) (332 aa) fasta scores: E(): 3.4e-52, 47.11% id in 312 aa, and to Rhizobium loti esterase mlr3816 SWALL:Q98FE1 (EMBL:AP003002) (355 aa) fasta scores: E(): 1.5e-21, 29.94% id in 334 aa; hypothetical protein 2660333..2661316 Burkholderia pseudomallei K96243 3095237 YP_111977.1 CDS BPSS1971 NC_006351.1 2662056 2663579 D Similar in its full length to Ralstonia solanacearum probable transmembrane protein rsp1524 or rs04801 SWALL:Q8XPW2 (EMBL:AL646085) (505 aa) fasta scores: E(): 1.4e-75, 42.12% id in 489 aa, N-terminal region to Rhizobium loti two-component system histidine protein kinase mll4698 SWALL:Q98DH8 (EMBL:AP003004) (535 aa) fasta scores: E(): 3.6e-21, 32.24% id in 338 aa, and C-terminal region to Xanthomonas campestris response regulator xcc3729 SWALL:Q8P4H8 (EMBL:AE012493) (349 aa) fasta scores: E(): 4.1e-38, 38.46% id in 338 aa; two component system fusin protein 2662056..2663579 Burkholderia pseudomallei K96243 3097107 YP_111978.1 CDS BPSS1972 NC_006351.1 2663739 2664188 D hypothetical protein 2663739..2664188 Burkholderia pseudomallei K96243 3097108 YP_111979.1 CDS BPSS1973 NC_006351.1 2665124 2667058 D Similar to Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 7.7e-91, 56.77% id in 627 aa, and to Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 2e-24, 48.81% id in 631 aa; sedolisin-B 2665124..2667058 Burkholderia pseudomallei K96243 3095105 YP_111980.1 CDS BPSS1974 NC_006351.1 2667859 2669577 D C-terminal region similar to Ralstonia solanacearum hemagglutinin-related transmembrane protein rsp1094 or rs02600 SWALL:Q8XQX4 (EMBL:AL646082) (459 aa) fasta scores: E(): 8.5e-38, 41.25% id in 446 aa, and N-terminal region to Mycobacterium tuberculosis hypothetical pe-PGRS family protein precursor rv3508 or mtv023.15 SWALL:YZ08_MYCTU (SWALL:O53553) (1901 aa) fasta scores: E(): 3.7e-21, 31.42% id in 560 aa. Note: This CDS contains a repeat region between residue 44 and residue 199; lipoprotein 2667859..2669577 Burkholderia pseudomallei K96243 3095106 YP_111981.1 CDS BPSS1975 NC_006351.1 2669668 2670951 D hypothetical protein 2669668..2670951 Burkholderia pseudomallei K96243 3097219 YP_111982.1 CDS BPSS1976 NC_006351.1 2671756 2673126 D hypothetical protein 2671756..2673126 Burkholderia pseudomallei K96243 3095868 YP_111983.1 CDS BPSS1977 NC_006351.1 2673158 2674486 D Low similarity to Pseudomonas aeruginosa probable glycosyl hydrolase pa2237 SWALL:Q9I1N2 (EMBL:AE004649) (442 aa) fasta scores: E(): 9.6e-15, 25.65% id in 382 aa; hypothetical protein 2673158..2674486 Burkholderia pseudomallei K96243 3095869 YP_111984.1 CDS BPSS1978 NC_006351.1 2674611 2676974 D Similar to Ralstonia solanacearum tyrosine-protein kinase EpsB SWALL:EPB2_RALSO (SWALL:Q45409) (750 aa) fasta scores: E(): 3.4e-36, 30.28% id in 733 aa, and to Escherichia coli O157:H7 tyrosine-protein kinase Etk or z1398 or ecs1137 SWALL:ETK_ECO57 (SWALL:Q8XC28) (726 aa) fasta scores: E(): 9.6e-36, 28.78% id in 747 aa; EPS transport-related membrane protein kinase 2674611..2676974 Burkholderia pseudomallei K96243 3095490 YP_111985.1 CDS BPSS1979 NC_006351.1 2677447 2678637 D hypothetical protein 2677447..2678637 Burkholderia pseudomallei K96243 3095491 YP_111986.1 CDS BPSS1980 NC_006351.1 2678760 2679263 D No significant database matches. Possible alternative translational start sites; hypothetical protein 2678760..2679263 Burkholderia pseudomallei K96243 3096841 YP_111987.1 CDS BPSS1981 NC_006351.1 2679546 2679821 D Similar to Serratia marcescens hypothetical 10.1 kDa protein in bioA 5'region SWALL:YOHL_SERMA (SWALL:P55757) (91 aa) fasta scores: E(): 3.4e-14, 53.84% id in 91 aa, and to Escherichia coli, and Escherichia coli O6 hypothetical protein YaiN or b0357 or c0466 SWALL:YAIN_ECOLI (SWALL:P55756) (91 aa) fasta scores: E(): 7.1e-10, 41.75% id in 91 aa; hypothetical protein 2679546..2679821 Burkholderia pseudomallei K96243 3097169 YP_111988.1 CDS BPSS1982 NC_006351.1 2679834 2681102 D Similar to Agrobacterium tumefaciens cation efflux system protein atu0891 or agr_c_1625 SWALL:Q8UGZ4 (EMBL:AE009054) (338 aa) fasta scores: E(): 2.4e-36, 46.6% id in 412 aa, and to the N-terminal region of Escherichia coli zinc transporter ZitB or b0752 SWALL:ZITB_ECOLI (SWALL:P75757) (313 aa) fasta scores: E(): 4.1e-15, 39.24% id in 186 aa. Note: This CDS presents no similarities in the region between residue 170 and 280; cation efflux related membrane protein 2679834..2681102 Burkholderia pseudomallei K96243 3097170 YP_111989.1 CDS BPSS1983 NC_006351.1 2681882 2682934 D Similar to eukaryotic proteins as Sus scrofa deoxyribonuclease II precursor DNAse2 or Dnl2 SWALL:DRN2_PIG (SWALL:O62855) (364 aa) fasta scores: E(): 1.8e-26, 30.55% id in 360 aa, and to Homo sapiens deoxyribonuclease II precursor DNAse2 or Dnl2 SWALL:DRN2_HUMAN (SWALL:O00115) (360 aa) fasta scores: E(): 5e-26, 29.32% id in 324 aa; deoxyribonuclease 2681882..2682934 Burkholderia pseudomallei K96243 3096355 YP_111990.1 CDS BPSS1984 NC_006351.1 2683006 2685912 D hypothetical protein 2683006..2685912 Burkholderia pseudomallei K96243 3096356 YP_111991.1 CDS BPSS1985 NC_006351.1 2685909 2686691 D hypothetical protein 2685909..2686691 Burkholderia pseudomallei K96243 3096944 YP_111992.1 CDS BPSS1986 NC_006351.1 2686735 2687490 D hypothetical protein 2686735..2687490 Burkholderia pseudomallei K96243 3095600 YP_111993.1 CDS BPSS1987 NC_006351.1 2687491 2689113 D phosphesterase 2687491..2689113 Burkholderia pseudomallei K96243 3095601 YP_111994.1 CDS BPSS1988 NC_006351.1 2689110 2690126 D hypothetical protein 2689110..2690126 Burkholderia pseudomallei K96243 3096100 YP_111995.1 CDS BPSS1989 NC_006351.1 2690149 2691303 D Similar to Streptomyces coelicolor hypothetical protein sco7155 or sc9a4.17 SWALL:Q9FBT7 (EMBL:AL939130) (355 aa) fasta scores: E(): 5.4e-20, 32.93% id in 334 aa, and to Anabaena sp. hypothetical protein alr1577 SWALL:Q8YWM8 (EMBL:AP003586) (366 aa) fasta scores: E(): 3.6e-07, 28.19% id in 376 aa; hypothetical protein 2690149..2691303 Burkholderia pseudomallei K96243 3096101 YP_111996.1 CDS BPSS1990 NC_006351.1 2691407 2692159 R Similar to Pseudomonas aeruginosa hypothetical aldolase class II protein pa3430 SWALL:YY30_PSEAE (SWALL:Q9HYH5) (259 aa) fasta scores: E(): 3.6e-60, 62.34% id in 247 aa, and to parts of Homo sapiens alpha adducin Add1 or AddA SWALL:ADDA_HUMAN (SWALL:P35611) (737 aa) fasta scores: E(): 3.3e-32, 41.03% id in 251 aa; aldolase complement(2691407..2692159) Burkholderia pseudomallei K96243 3097225 YP_111997.1 CDS BPSS1991 NC_006351.1 2692430 2693104 D Similar to Vibrio cholerae hypothetical protein vc0266 SWALL:Q9KV90 (EMBL:AE004115) (190 aa) fasta scores: E(): 3.8e-47, 61.9% id in 189 aa, and to Ralstonia solanacearum hypothetical protein rsc1329 or rs02851 SWALL:Q8XZR6 (EMBL:AL646064) (198 aa) fasta scores: E(): 1.2e-37, 53.4% id in 191 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 2692430..2693104 Burkholderia pseudomallei K96243 3096962 YP_111998.1 CDS BPSS1992 NC_006351.1 2693248 2695182 R catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase complement(2693248..2695182) Burkholderia pseudomallei K96243 3096963 YP_111999.1 CDS mprA NC_006351.1 2695482 2696984 R Previously sequenced as Burkholderia pseudomallei serine metalloprotease precursor SWALL:Q9F881 (EMBL:AF254803) (500 aa) fasta scores: E(): 7.7e-170, 100% id in 500 aa. Similar to Xanthomonas campestris extracellular protease precursor xcc0851 SWALL:EXPR_XANCP (SWALL:P23314) (580 aa) fasta scores: E(): 4.5e-65, 49.02% id in 463 aa; serine metalloprotease precursor complement(2695482..2696984) Burkholderia pseudomallei K96243 3095199 YP_112000.1 CDS irlR2 NC_006351.1 2698676 2699368 D Similar to Burkholderia pseudomallei transcriptional activator protein IrlR SWALL:IRLR_BURPS (SWALL:O31395) (229 aa) fasta scores: E(): 2.6e-70, 73.24% id in 228 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 transcriptional regulatory protein CusR or b0571 or c0657 or z0709 or ecs0609 SWALL:CUSR_ECOLI (SWALL:P77380) (227 aa) fasta scores: E(): 1.1e-52, 60.81% id in 222 aa; metal-related two-component system, response regulator 2698676..2699368 Burkholderia pseudomallei K96243 3094905 YP_112001.1 CDS irlS2 NC_006351.1 2699365 2700819 D Similar to Burkholderia pseudomallei sensor protein IrlS SWALL:IRLS_BURPS (SWALL:O31396) (464 aa) fasta scores: E(): 6.3e-81, 49.78% id in 468 aa, and to Escherichia coli sensor kinase CusS or b0570 SWALL:CUSS_ECOLI (SWALL:P77485) (480 aa) fasta scores: E(): 8.6e-38, 33.94% id in 436 aa; metal-related two-component system, histidine kinase 2699365..2700819 Burkholderia pseudomallei K96243 3095021 YP_112002.1 CDS BPSS1996 NC_006351.1 2700919 2701311 D hypothetical protein 2700919..2701311 Burkholderia pseudomallei K96243 3096940 YP_112003.1 CDS oxa NC_006351.1 2701464 2702273 R Almost identical to the previously sequenced Burkholderia pseudomallei beta-lactamase precursor Oxa SWALL:CAD32565 (EMBL:AJ488303) (269 aa) fasta scores: E(): 2.2e-111, 99.62% id in 269 aa. Similar to Pseudomonas aeruginosa beta-lactamase Oxa-18 precursor SWALL:BLOI_PSEAE (SWALL:O07293) (275 aa) fasta scores: E(): 2.4e-37, 43.07% id in 267 aa; beta-lactamase precursor complement(2701464..2702273) Burkholderia pseudomallei K96243 3095413 YP_112004.1 CDS BPSS1998 NC_006351.1 2702920 2705784 R Similar to Anabaena sp. hypothetical protein alr1386 SWALL:Q8YX32 (EMBL:AP003585) (1001 aa) fasta scores: E(): 2.5e-60, 41.34% id in 1028 aa, and low similarity to Methanosarcina mazei ORF492 SWALL:Q50245 (EMBL:X84710) (491 aa) fasta scores: E(): 0.00018, 24.58% id in 301 aa; lipoprotein complement(2702920..2705784) Burkholderia pseudomallei K96243 3096941 YP_112005.1 CDS BPSS1999 NC_006351.1 2706195 2707031 R Similar to Rickettsia prowazekii hypothetical protein rp393 SWALL:Q9ZDD8 (EMBL:AJ235271) (282 aa) fasta scores: E(): 2.1e-27, 34.1% id in 258 aa, and to Brucella melitensis high-affinity iron permease bmeii0883 SWALL:Q8YBL6 (EMBL:AE009722) (278 aa) fasta scores: E(): 2.9e-16, 30.03% id in 273 aa; transport related, membrane protein complement(2706195..2707031) Burkholderia pseudomallei K96243 3095035 YP_112006.1 CDS BPSS2000 NC_006351.1 2707045 2707386 R Similar to Rickettsia prowazekii hypothetical protein rp394 SWALL:Y394_RICPR (SWALL:Q9ZDD7) (125 aa) fasta scores: E(): 2e-06, 33.33% id in 81 aa, and to Brucella melitensis hypothetical protein bmeii0884 SWALL:Q8YBL5 (EMBL:AE009722) (124 aa) fasta scores: E(): 9e-06, 31.63% id in 98 aa; hypothetical protein complement(2707045..2707386) Burkholderia pseudomallei K96243 3096442 YP_112007.1 CDS BPSS2001 NC_006351.1 2708347 2708595 R hypothetical protein complement(2708347..2708595) Burkholderia pseudomallei K96243 3096443 YP_112008.1 CDS BPSS2003 NC_006351.1 2710129 2710617 D Similar to Pasteurella multocida hypothetical protein Pm1939 SWALL:Q9CJQ5 (EMBL:AE006230) (151 aa) fasta scores: E(): 6.5e-26, 50% id in 142 aa; periplasmic protein 2710129..2710617 Burkholderia pseudomallei K96243 3095183 YP_112009.1 CDS BPSS2005 NC_006351.1 2711269 2711580 R Similar to Ralstonia solanacearum ISRso16-transposase OrfA protein Rsp0557 or Rs03922 SWALL:Q8XSC1 (EMBL:AL646079) (88 aa) fasta scores: E(): 1.1e-16, 67.07% id in 82 aa, and to Xanthomonas campestris truncated transposase tnP SWALL:Q8RJP9 (EMBL:U33548) (88 aa) fasta scores: E(): 1.1e-14, 62.19% id in 82 aa; transposase complement(2711269..2711580) Burkholderia pseudomallei K96243 3096435 YP_112010.1 CDS BPSS2006 NC_006351.1 2711640 2711780 R hypothetical protein complement(2711640..2711780) Burkholderia pseudomallei K96243 3096436 YP_112011.1 CDS BPSS2007 NC_006351.1 2711792 2712958 R Similar to Ralstonia solanacearum transmembrane protein Rsc1400 or Rs05292 SWALL:Q8XZJ5 (EMBL:AL646064) (375 aa) fasta scores: E(): 4e-36, 36.54% id in 353 aa; hypothetical protein complement(2711792..2712958) Burkholderia pseudomallei K96243 3095801 YP_112012.1 CDS glmS3 NC_006351.1 2714171 2715988 R Similar to Escherichia coli glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS or b3729 SWALL:GLMS_ECOLI (SWALL:P17169) (608 aa) fasta scores: E(): 6.3e-116, 52.86% id in 611 aa; glucosamine--fructose-6-phosphate aminotransferase complement(2714171..2715988) Burkholderia pseudomallei K96243 3095222 YP_112013.1 CDS BPSS2010 NC_006351.1 2715995 2717116 R hypothetical protein complement(2715995..2717116) Burkholderia pseudomallei K96243 3095979 YP_112014.1 CDS BPSS2011 NC_006351.1 2717209 2719323 R hypothetical protein complement(2717209..2719323) Burkholderia pseudomallei K96243 3095774 YP_112015.1 CDS BPSS2012 NC_006351.1 2719653 2720468 R hypothetical protein complement(2719653..2720468) Burkholderia pseudomallei K96243 3095775 YP_112016.1 CDS BPSS2013 NC_006351.1 2720481 2721737 R hypothetical protein complement(2720481..2721737) Burkholderia pseudomallei K96243 3095363 YP_112017.1 CDS BPSS2014 NC_006351.1 2721751 2722743 R No significant database matches. Possible alternative translational start sites; hypothetical protein complement(2721751..2722743) Burkholderia pseudomallei K96243 3096651 YP_112018.1 CDS BPSS2015 NC_006351.1 2722747 2724309 R Similar to Listeria monocytogenes hypothetical protein Lmo0529 SWALL:Q8Y9J8 (EMBL:AL591975) (416 aa) fasta scores: E(): 4.9e-28, 29.22% id in 414 aa, and to Leptospira interrogans glycosyl transferase La0627 SWALL:AAN47826 (EMBL:AE011249) (516 aa) fasta scores: E(): 1.3e-22, 28.13% id in 391 aa. CDS is extended at the N-terminus in comparison to similar proteins; inner membrane glycosyltransferase complement(2722747..2724309) Burkholderia pseudomallei K96243 3096652 YP_112019.1 CDS wecB NC_006351.1 2725574 2726788 D Similar to Escherichia coli UDP-N-acetylglucosamine 2-epimerase WecB or RffE or NfrC or b3786 SWALL:WECB_ECOLI (SWALL:P27828) (376 aa) fasta scores: E(): 1.3e-81, 57.83% id in 370 aa; UDP-N-acetylglucosamine 2-epimerase 2725574..2726788 Burkholderia pseudomallei K96243 3096547 YP_112020.1 CDS BPSS2017 NC_006351.1 2728076 2728954 R Similar to Vibrio cholerae transcriptional activator protein NhaR or HlyT or Vc0677 SWALL:NHAR_VIBCH (SWALL:P52692) (296 aa) fasta scores: E(): 3.7e-23, 31.72% id in 290 aa, and to Escherichia coli transcriptional activator protein nhar nhar or anto or b0020 SWALL:NHAR_ECOLI (SWALL:P10087) (301 aa) fasta scores: E(): 1.8e-22, 31.46% id in 286 aa; LysR family transcriptional regulator complement(2728076..2728954) Burkholderia pseudomallei K96243 3097041 YP_112021.1 CDS BPSS2018 NC_006351.1 2729087 2729848 D Similar to Agrobacterium tumefaciens hypothetical protein Atu4476 or Agr_l_786 SWALL:Q8U7H3 (EMBL:AE009376) (275 aa) fasta scores: E(): 1e-63, 66.13% id in 251 aa, and to Escherichia coli hypothetical protein YoaE or b1816 or c2222 or z2859 or ecs2525 SWALL:YOAE_ECOLI (SWALL:P76262) (518 aa) fasta scores: E(): 1.1e-48, 50.61% id in 243 aa; hypothetical protein 2729087..2729848 Burkholderia pseudomallei K96243 3097042 YP_112022.1 CDS BPSS2019 NC_006351.1 2729992 2730315 D Similar to Caulobacter crescentus hypothetical protein Cc2510 SWALL:Q9A5E0 (EMBL:AE005919) (106 aa) fasta scores: E(): 1.2e-09, 38.73% id in 111 aa; hypothetical protein 2729992..2730315 Burkholderia pseudomallei K96243 3097021 YP_112023.1 CDS BPSS2020 NC_006351.1 2730550 2730978 D Similar to Rhizobium loti hypothetical protein Mll0824 SWALL:Q98LY2 (EMBL:AP002995) (138 aa) fasta scores: E(): 3.4e-06, 29.1% id in 134 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4177 SWALL:Q9HWK4 (EMBL:AE004834) (133 aa) fasta scores: E(): 4.4e-06, 37.36% id in 91 aa; hypothetical protein 2730550..2730978 Burkholderia pseudomallei K96243 3096331 YP_112024.1 CDS BPSS2021 NC_006351.1 2731210 2732691 R Similar to Mus musculus sphingosine-1-phosphate lyase Sgpl1 SWALL:O54955 (EMBL:AF036894) (568 aa) fasta scores: E(): 6.1e-52, 37.34% id in 482 aa; decarboxylase complement(2731210..2732691) Burkholderia pseudomallei K96243 3096332 YP_112025.1 CDS BPSS2022 NC_006351.1 2732831 2733736 D No significant database matches. Possible alternative translation start sites; outer membrane protein 2732831..2733736 Burkholderia pseudomallei K96243 3097275 YP_112026.1 CDS BPSS2023 NC_006351.1 2734100 2734363 D hypothetical protein 2734100..2734363 Burkholderia pseudomallei K96243 3097276 YP_112027.1 CDS BPSS2024 NC_006351.1 2734375 2735583 R Similar to Anabaena sp. alcohol dehydrogenase All5334 SWALL:Q8YLG4 (EMBL:AP003599) (409 aa) fasta scores: E(): 3.1e-102, 65.42% id in 402 aa, and to Methylobacter marinus glutathione-dependent formaldehyde dehydrogenase Fdh SWALL:FADH_METMR (SWALL:P47734) (424 aa) fasta scores: E(): 5.2e-43, 44.41% id in 412 aa; zinc-containing alcohol dehydrogenase complement(2734375..2735583) Burkholderia pseudomallei K96243 3095042 YP_112028.1 CDS BPSS2025 NC_006351.1 2736052 2737575 R Similar to Mus musculus sphingosine-1-phosphate lyase Sgpl1 SWALL:O54955 (EMBL:AF036894) (568 aa) fasta scores: E(): 6e-48, 37.71% id in 456 aa; decarboxylase complement(2736052..2737575) Burkholderia pseudomallei K96243 3095612 YP_112029.1 CDS BPSS2026 NC_006351.1 2737851 2739464 R Similar to Xanthomonas axonopodis xylulose kinase XylB or Xac4244 SWALL:AAM39079 (EMBL:AE012077) (532 aa) fasta scores: E(): 3.9e-60, 37.87% id in 536 aa, and to Brucella abortus erythritol kinase EryA SWALL:Q9ZB32 (EMBL:U57100) (519 aa) fasta scores: E(): 7.1e-19, 26.77% id in 534 aa; carbohydrate kinase complement(2737851..2739464) Burkholderia pseudomallei K96243 3095613 YP_112030.1 CDS BPSS2027 NC_006351.1 2740058 2740432 R Similar to Pseudomonas aeruginosa hypothetical protein Pa3178 SWALL:Q9HZ56 (EMBL:AE004742) (125 aa) fasta scores: E(): 2.3e-16, 48.27% id in 116 aa; hypothetical protein complement(2740058..2740432) Burkholderia pseudomallei K96243 3096657 YP_112031.1 CDS BPSS2028 NC_006351.1 2740651 2741325 R Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2885 SWALL:Q9HZW2 (EMBL:AE004714) (198 aa) fasta scores: E(): 1.6e-22, 40.21% id in 189 aa, and to Neisseria gonorrhoeae regulatory protein MtrR SWALL:MTRR_NEIGO (SWALL:P39897) (210 aa) fasta scores: E(): 0.0013, 28.77% id in 139 aa; TetR family transcriptional regulator complement(2740651..2741325) Burkholderia pseudomallei K96243 3096658 YP_112032.1 CDS BPSS2029 NC_006351.1 2741521 2742693 R Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1535 SWALL:Q9I3H8 (EMBL:AE004582) (382 aa) fasta scores: E(): 1e-70, 50% id in 380 aa, and to Rattus norvegicus acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor AcaDL SWALL:ACDL_RAT (SWALL:P15650) (430 aa) fasta scores: E(): 4.8e-43, 37.63% id in 380 aa; acyl-CoA dehydrogenase complement(2741521..2742693) Burkholderia pseudomallei K96243 3095659 YP_112033.1 CDS BPSS2030 NC_006351.1 2743020 2743880 D Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa2887 SWALL:Q9HZW0 (EMBL:AE004715) (292 aa) fasta scores: E(): 1.1e-58, 57.58% id in 290 aa, and to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SWALL:GNO_GLUOX (SWALL:P50199) (256 aa) fasta scores: E(): 4.9e-21, 36.99% id in 246 aa; short-chain dehydrogenase 2743020..2743880 Burkholderia pseudomallei K96243 3095664 YP_112034.1 CDS BPSS2031 NC_006351.1 2743882 2745498 D Similar to Myxococcus xanthus acetyl-CoA carboxylase carboxyltransferase AccB SWALL:Q9FAF6 (EMBL:AB039884) (538 aa) fasta scores: E(): 1.1e-112, 56.48% id in 540 aa; acetyl-CoA carboxylase carboxyltransferase 2743882..2745498 Burkholderia pseudomallei K96243 3095665 YP_112035.1 CDS BPSS2032 NC_006351.1 2745511 2746662 D Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa2889 SWALL:Q9HZV8 (EMBL:AE004715) (386 aa) fasta scores: E(): 1e-104, 65.87% id in 381 aa, and to Rattus norvegicus acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor AcaDL SWALL:ACDL_RAT (SWALL:P15650) (430 aa) fasta scores: E(): 3.2e-43, 35.88% id in 379 aa; acyl-CoA dehydrogenase 2745511..2746662 Burkholderia pseudomallei K96243 3097245 YP_112036.1 CDS BPSS2033 NC_006351.1 2746669 2747511 D Similar to Pseudomonas aeruginosa probable enoyl-CoA hydratase/isomerase Pa2890 SWALL:Q9HZV7 (EMBL:AE004715) (264 aa) fasta scores: E(): 4.4e-26, 44.09% id in 254 aa, and to Escherichia coli probable enoyl-CoA hydratase PaaG or b1394 SWALL:PAAG_ECOLI (SWALL:P77467) (262 aa) fasta scores: E(): 5.9e-15, 34.48% id in 261 aa; enoyl-CoA hydratase 2746669..2747511 Burkholderia pseudomallei K96243 3097246 YP_112037.1 CDS BPSS2034 NC_006351.1 2747508 2749520 D Similar to Mycobacterium tuberculosis acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase (EC 6.3.4.14); biotin carboxyl carrier protein (BccP)] protein AccA1 or BccA or Rv2501c or mt2576 or mtcy07a7.07C SWALL:BCCA_MYCTU (SWALL:P46401) (654 aa) fasta scores: E(): 2.6e-90, 45.97% id in 670 aa; acetyl-/propionyl-coenzyme A carboxylase subunit alpha 2747508..2749520 Burkholderia pseudomallei K96243 3096222 YP_112038.1 CDS BPSS2035 NC_006351.1 2749555 2750439 D Similar to many eg. Streptomyces coelicolor hypothetical protein SCO6298 or SCBAC8D1.11c SWALL:Q93RX4 (EMBL:AL939127) (308 aa) fasta scores: E(): 4.2e-17, 33.65% id in 315 aa; hypothetical protein 2749555..2750439 Burkholderia pseudomallei K96243 3096952 YP_112039.1 CDS BPSS2036 NC_006351.1 2750802 2752463 D Similar to Pseudomonas aeruginosa probable AMP-binding enzyme Pa1617 SWALL:Q9I3A5 (EMBL:AE004589) (555 aa) fasta scores: E(): 3.1e-73, 48.55% id in 554 aa, and to Rhizobium leguminosarum malonyl CoA synthetase MatB SWALL:Q9ZIP5 (EMBL:AF117694) (504 aa) fasta scores: E(): 1.9e-16, 27.11% id in 472 aa; AMP-binding acetyl-CoA synthetase 2750802..2752463 Burkholderia pseudomallei K96243 3096953 YP_112040.1 CDS BPSS2037 NC_006351.1 2753572 2754483 D Similar to Streptomyces coelicolor fatty acid desaturase SCO3128 or SCE66.07 SWALL:Q9K3T6 (EMBL:AL939115) (336 aa) fasta scores: E(): 4.2e-43, 40.98% id in 283 aa, and to Saccharomyces cerevisiae acyl-CoA desaturase 1 Ole1 or ygl055W SWALL:ACO1_YEAST (SWALL:P21147) (510 aa) fasta scores: E(): 5.7e-14, 27.83% id in 291 aa. Also similar to neighbouring CDS BPSS2040 (49.135% identity (50.000% ungapped) in 289 aa overlap).; inner membrane fatty acid desaturase 2753572..2754483 Burkholderia pseudomallei K96243 3096932 YP_112041.1 CDS BPSS2038 NC_006351.1 2754509 2754793 D Similar to Anabaena sp. polyketide synthase HetM or Alr5357 SWALL:HETM_ANASP (SWALL:P37693) (506 aa) fasta scores: E(): 2.5e-06, 48% id in 75 aa, and to Stigmatella aurantiaca MxaF SWALL:Q93TW6 (EMBL:AF319998) (2368 aa) fasta scores: E(): 0.00056, 40.9% id in 66 aa; polyketide synthase 2754509..2754793 Burkholderia pseudomallei K96243 3096933 YP_112042.1 CDS BPSS2039 NC_006351.1 2754806 2755741 D Similar to Ralstonia solanacearum cyclopropane-mycolic acid synthase Rsp1657 or Rs02216 SWALL:Q8XPI3 (EMBL:AL646086) (290 aa) fasta scores: E(): 8e-24, 33.68% id in 282 aa, and to Mycobacterium tuberculosis cyclopropane-fatty-acyl-phospholipid synthase 1 CmaA1 or Cma1 or Rv3392c or mt3499 or mtv004.50 SWALL:CFA1_MYCTU (SWALL:Q11195) (287 aa) fasta scores: E(): 8.1e-20, 31.33% id in 300 aa; cyclopropane-fatty-acyl-phospholipid synthase 2754806..2755741 Burkholderia pseudomallei K96243 3095337 YP_112043.1 CDS BPSS2040 NC_006351.1 2755738 2756778 D Similar to Ralstonia solanacearum fatty acid desaturase transmembrane protein Rsp0792 or Rs01915 SWALL:Q8XRN9 (EMBL:AL646080) (301 aa) fasta scores: E(): 1.3e-38, 44.64% id in 271 aa, and to Synechococcus sp. delta-9 desaturase DesC SWALL:O07873 (EMBL:U36390) (277 aa) fasta scores: E(): 2e-11, 31.74% id in 252 aa. Also similar to neighbouring CDS BPSS2037 (49.135% identity (50.000% ungapped) in 289 aa overlap).; inner membrane fatty acid desaturase 2755738..2756778 Burkholderia pseudomallei K96243 3095152 YP_112044.1 CDS BPSS2041 NC_006351.1 2756819 2757844 D Similar to Streptomyces coelicolor hypothetical protein SCO4016 or 2SC10A7.20 SWALL:Q9ADP0 (EMBL:AL939118) (317 aa) fasta scores: E(): 0.00057, 28.57% id in 329 aa; hypothetical protein 2756819..2757844 Burkholderia pseudomallei K96243 3095153 YP_112045.1 CDS BPSS2042 NC_006351.1 2757841 2759694 D Similar to Myxococcus xanthus saframycin MX1 synthetase B SafB SWALL:Q50857 (EMBL:U24657) (1770 aa) fasta scores: E(): 3.3e-77, 44.21% id in 588 aa, and to Streptomyces coelicolor polyketide synthase SCO5892 or SC3F7.12 SWALL:O54155 (EMBL:AL939125) (2297 aa) fasta scores: E(): 5.2e-47, 43.28% id in 603 aa, and to Mycobacterium tuberculosis fatty-acid--CoA ligase FadD26 or Rv2930 or mt2999 or mtcy338.19 SWALL:FD26_MYCTU (SWALL:Q10976) (583 aa) fasta scores: E(): 2.1e-33, 34.11% id in 595 aa; inner membrane fatty-acid--CoA ligase 2757841..2759694 Burkholderia pseudomallei K96243 3095498 YP_112046.1 CDS BPSS2043 NC_006351.1 2759708 2760127 D Similar to Deinococcus radiodurans ComA-related protein Dr0847 SWALL:Q9RW22 (EMBL:AE001939) (119 aa) fasta scores: E(): 9.3e-23, 50.84% id in 118 aa, and to Bacillus subtilis ComA operon protein 2 YuxO or ComAB or ComA2 SWALL:CMA2_BACSU (SWALL:P14205) (126 aa) fasta scores: E(): 0.00047, 26.08% id in 115 aa; hypothetical protein 2759708..2760127 Burkholderia pseudomallei K96243 3095499 YP_112047.1 CDS BPSS2044 NC_006351.1 2760200 2761105 D Similar to Ralstonia solanacearum hydrolase RS04279 SWALL:Q8XYB7 (EMBL:AL646067) (295 aa) fasta scores: E(): 2.3e-24, 34.26% id in 286 aa, and to the C-terminal region of Caulobacter crescentus hypothetical protein CC2565 SWALL:Q9A592 (EMBL:AE005925) (475 aa) fasta scores: E(): 2.3e-25, 34.43% id in 302 aa; hypothetical protein 2760200..2761105 Burkholderia pseudomallei K96243 3095985 YP_112048.1 CDS BPSS2045 NC_006351.1 2761576 2762172 D Similar to Xanthomonas axonopodis hypothetical protein Xac2731 SWALL:AAM37576 (EMBL:AE011912) (206 aa) fasta scores: E(): 1.7e-60, 78.42% id in 190 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 2761576..2762172 Burkholderia pseudomallei K96243 3095695 YP_112049.1 CDS BPSS2046 NC_006351.1 2762409 2763137 D Similar to Rhizobium hedysari transposase SWALL:O30982 (EMBL:AF023675) (250 aa) fasta scores: E(): 3.9e-32, 44.29% id in 228 aa, and to Pantoea agglomerans IS1327 containing a transposase TnpA SWALL:P94785 (EMBL:X87144) (234 aa) fasta scores: E(): 8.6e-23, 33.33% id in 228 aa; IS element transposase 2762409..2763137 Burkholderia pseudomallei K96243 3095696 YP_112050.1 CDS BPSS2047 NC_006351.1 2763357 2764790 D Similar to Streptomyces coelicolor hydrolase SCO1984 or SC3C9.19c SWALL:Q93JH8 (EMBL:AL939111) (465 aa) fasta scores: E(): 6.7e-32, 32.52% id in 452 aa, and to Rhodococcus corallinus s-triazine hydrolase TrzA SWALL:TRZA_RHOCO (SWALL:Q52725) (476 aa) fasta scores: E(): 2e-17, 27.97% id in 454 aa; chrolohydrolase 2763357..2764790 Burkholderia pseudomallei K96243 3096176 YP_112051.1 CDS BPSS2048 NC_006351.1 2764816 2765469 D Similar to Caulobacter crescentus glutathione S-transferase Cc2647 SWALL:Q9A522 (EMBL:AE005932) (215 aa) fasta scores: E(): 6.4e-51, 57.94% id in 214 aa, and to Zea mays glutathione S-transferase III Gst3 SWALL:GTH3_MAIZE (SWALL:P04907) (221 aa) fasta scores: E(): 8e-11, 29.66% id in 209 aa; glutathione S-transferase 2764816..2765469 Burkholderia pseudomallei K96243 3096177 YP_112052.1 CDS BPSS2049 NC_006351.1 2765650 2766378 R Similar to Rhizobium hedysari transposase SWALL:O30982 (EMBL:AF023675) (250 aa) fasta scores: E(): 7.8e-32, 44.29% id in 228 aa, and to Pantoea agglomerans IS1327 containing a transposase TnpA SWALL:P94785 (EMBL:X87144) (234 aa) fasta scores: E(): 5e-22, 32.89% id in 228 aa; IS element transposase complement(2765650..2766378) Burkholderia pseudomallei K96243 3096343 YP_112053.1 CDS BPSS2051 NC_006351.1 2767010 2768149 R Similar to Ralstonia solanacearum transposase Rsc3179 or Rs06078 SWALL:Q8XUK9 (EMBL:AL646074) (363 aa) fasta scores: E(): 5.9e-48, 41.71% id in 338 aa; DNA-binding protein complement(2767010..2768149) Burkholderia pseudomallei K96243 3095619 YP_112054.1 CDS BPSS2052 NC_006351.1 2768149 2769918 R Similar to Ralstonia solanacearum probable activation/secretion signal peptide protein Rsp0550 or Rs06123 SWALL:Q8XSC8 (EMBL:AL646079) (590 aa) fasta scores: E(): 9.6e-145, 62.7% id in 563 aa, and to Proteus mirabilis hemolysin activator protein precursor HpmB SWALL:HLYB_PROMI (SWALL:P16465) (561 aa) fasta scores: E(): 9.1e-28, 28.64% id in 412 aa, and to Serratia marcescens hemolysin activator protein precursor ShlB SWALL:HLYB_SERMA (SWALL:P15321) (557 aa) fasta scores: E(): 1.6e-25, 26.07% id in 510 aa. Possible alternative translational start sites; activator/secretion protein complement(2768149..2769918) Burkholderia pseudomallei K96243 3096990 YP_112055.1 CDS BPSS2053 NC_006351.1 2770766 2780077 R Similar to Ralstonia solanacearum probable hemagglutinin-related protein Rsc1775 or Rs04371 SWALL:Q8XYI3 (EMBL:AL646066) (3165 aa) fasta scores: E(): 3.8e-164, 33.54% id in 3258 aa, and to Yersinia pestis adhesin Ypo0599 or y3579 SWALL:Q8ZIA8 (EMBL:AJ414143) (3295 aa) fasta scores: E(): 3.1e-62, 30.38% id in 3383 aa; cell surface protein complement(2770766..2780077) Burkholderia pseudomallei K96243 3096991 YP_112056.1 CDS BPSS2054 NC_006351.1 2781283 2785914 R similar to Rhs-family proteins eg. Yersinia pestis hypothetical protein Ypo0762 SWALL:Q8ZHW7 (EMBL:AJ414144) (1438 aa) fasta scores: E(): 9e-190, 43.08% id in 1460 aa, and to Escherichia coli RhsB protein precursor or b3482 SWALL:RHSB_ECOLI (SWALL:P16917) (1411 aa) fasta scores: E(): 3.1e-34, 27.48% id in 1317 aa. Possibly membrane associated.; hypothetical protein complement(2781283..2785914) Burkholderia pseudomallei K96243 3096084 YP_112057.1 CDS BPSS2055 NC_006351.1 2785928 2787196 R Similar to Yersinia pestis hypothetical protein Ypo0763 SWALL:Q8ZHW6 (EMBL:AJ414144) (439 aa) fasta scores: E(): 1.6e-69, 43.99% id in 416 aa; hypothetical protein complement(2785928..2787196) Burkholderia pseudomallei K96243 3096085 YP_112058.1 CDS BPSS2056 NC_006351.1 2787212 2789416 R Similar to Pseudomonas aeruginosa hypothetical protein Pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 2.4e-105, 41.24% id in 725 aa, and to Yersinia pestis hypothetical protein Ypo0764 or y3430 SWALL:Q8ZHW5 (EMBL:AJ414144) (741 aa) fasta scores: E(): 5.3e-62, 33.28% id in 706 aa; hypothetical protein complement(2787212..2789416) Burkholderia pseudomallei K96243 3095178 YP_112059.1 CDS BPSS2057 NC_006351.1 2790628 2791848 R Similar to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.7e-163, 99.48% id in 386 aa, and to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 2e-138, 78.32% id in 406 aa; IS element transposase complement(2790628..2791848) Burkholderia pseudomallei K96243 3095705 YP_112060.1 CDS BPSS2058 NC_006351.1 2792731 2793330 R May be truncated due to insertion of downstream IS element. Similar to the N-terminal portion of many transporters eg. Ralstonia solanacearum glutamate symport transmembrane protein rsc1957 or rs03531 SWALL:Q8XY06 (EMBL:AL646067) (428 aa) fasta scores: E(): 1.5e-23, 50.75% id in 132 aa, and to Escherichia coli proton glutamate symport protein gltp or b4077 SWALL:GLTP_ECOLI (SWALL:P21345) (437 aa) fasta scores: E(): 2.4e-09, 36.6% id in 112 aa; ATP-binding inner membrane transport protein complement(2792731..2793330) Burkholderia pseudomallei K96243 3095706 YP_112061.1 CDS BPSS2059 NC_006351.1 2793355 2793765 R Similar to many eg. Ralstonia solanacearum hypothetical protein Rsp1515 or Rs04792 SWALL:Q8XPX1 (EMBL:AL646085) (130 aa) fasta scores: E(): 6.7e-26, 61.98% id in 121 aa; hypothetical protein complement(2793355..2793765) Burkholderia pseudomallei K96243 3097110 YP_112062.1 CDS ansA NC_006351.1 2793880 2794935 R Similar to Wolinella succinogenes L-asparaginase AnsA SWALL:ASPG_WOLSU (SWALL:P50286) (330 aa) fasta scores: E(): 1.2e-51, 48.32% id in 329 aa, and to Escherichia coli L-asparaginase II precursor AnsB or b2957 SWALL:ASG2_ECOLI (SWALL:P00805) (348 aa) fasta scores: E(): 1.5e-46, 47.23% id in 326 aa; L-asparaginase complement(2793880..2794935) Burkholderia pseudomallei K96243 3095666 YP_112063.1 CDS BPSS2061 NC_006351.1 2795170 2795802 D Similar to Ralstonia solanacearum hypothetical protein Rsp1517 or Rs04794 SWALL:Q8XPW9 (EMBL:AL646085) (214 aa) fasta scores: E(): 1.5e-34, 53.17% id in 205 aa; hypothetical protein 2795170..2795802 Burkholderia pseudomallei K96243 3097111 YP_112064.1 CDS BPSS2062 NC_006351.1 2796704 2797141 R Similar to Streptomyces coelicolor acetyltransferase SCO3363 or SCE94.14 SWALL:Q9X8M0 (EMBL:AL939116) (147 aa) fasta scores: E(): 1.6e-08, 38.73% id in 142 aa, and to the C-terminal region of Xanthomonas campestris acetyltransferase xcc4205 SWALL:Q8P373 (EMBL:AE012547) (203 aa) fasta scores: E(): 1.1e-05, 34.59% id in 159 aa; acetyltransferase (GNAT) family protein complement(2796704..2797141) Burkholderia pseudomallei K96243 3095914 YP_112065.1 CDS BPSS2063 NC_006351.1 2797101 2797703 R No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Pseudomonas alcaligenes hypothetical protein SWALL:Q9F127 (EMBL:AF173167) (282 aa) fasta scores: E(): 2e-20, 45% id in 140 aa, and to Pseudomonas syringae hypothetical protein SWALL:Q9L6V8 (EMBL:AF232005) (507 aa) fasta scores: E(): 2.2e-19, 45.92% id in 135 aa; hypothetical protein complement(2797101..2797703) Burkholderia pseudomallei K96243 3095915 YP_112066.1 CDS BPSS2063a NC_006351.1 2797880 2798065 R hypothetical protein complement(2797880..2798065) Burkholderia pseudomallei K96243 3095130 YP_112067.1 CDS BPSS2064 NC_006351.1 2798378 2799457 R Similar to Comamonas acidovorans outer membrane porin protein 32 precursor omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 6.7e-16, 28.64% id in 370 aa, and to Ralstonia solanacearum porin signal peptide protein rsc2760 or rs00094 SWALL:Q8XVR9 (EMBL:AL646071) (353 aa) fasta scores: E(): 5.9e-46, 42.12% id in 349 aa. Similar to BPSL1029, 65.565% identity (66.854% ungapped) in 363 aa overlap; porin protein complement(2798378..2799457) Burkholderia pseudomallei K96243 3095131 YP_112068.1 CDS BPSS2065 NC_006351.1 2799869 2801308 R Similar to Vibrio harveyi fatty aldehyde dehydrogenase AldH SWALL:DHAF_VIBHA (SWALL:Q56694) (510 aa) fasta scores: E(): 9.7e-58, 40.3% id in 464 aa, and to Streptomyces coelicolor aldehyde dehydrogenase SCO1871 or SCi39.18c SWALL:Q93RV5 (EMBL:AL939110) (509 aa) fasta scores: E(): 1.8e-61, 43.81% id in 477 aa; fatty aldehyde dehydrogenase complement(2799869..2801308) Burkholderia pseudomallei K96243 3097069 YP_112069.1 CDS BPSS2066 NC_006351.1 2801509 2802693 R Similar to Yersinia pestis hypothetical protein ypo1289 SWALL:Q8ZGK2 (EMBL:AJ414147) (380 aa) fasta scores: E(): 3.3e-79, 55.95% id in 386 aa, and to Rhizobium loti hypothetical protein mll7369 SWALL:Q986G4 (EMBL:AP003011) (385 aa) fasta scores: E(): 2.2e-77, 54.92% id in 386 aa; hypothetical protein complement(2801509..2802693) Burkholderia pseudomallei K96243 3096444 YP_112070.1 CDS BPSS2067 NC_006351.1 2802704 2803600 R Similar to Rhizobium meliloti hypothetical protein ra0037 or sma0077 SWALL:Q931A7 (EMBL:AE007198) (295 aa) fasta scores: E(): 1.8e-46, 44.33% id in 291 aa, and to Rhizobium loti hypothetical protein mll7370 SWALL:Q986G3 (EMBL:AP003011) (299 aa) fasta scores: E(): 3.6e-39, 40.97% id in 288 aa; aldose 1-epimerase complement(2802704..2803600) Burkholderia pseudomallei K96243 3096445 YP_112071.1 CDS BPSS2068 NC_006351.1 2803594 2804364 R Similar to Escherichia coli gluconate 5-dehydrogenase IdnO SWALL:IDNO_ECOLI (SWALL:P39345) (254 aa) fasta scores: E(): 3.4e-18, 30.46% id in 256 aa, and to Rhizobium loti probable oxidoreductase mll7371 SWALL:Q986G2 (EMBL:AP003011) (252 aa) fasta scores: E(): 6.2e-52, 58.96% id in 251 aa; short chain dehydrogenase complement(2803594..2804364) Burkholderia pseudomallei K96243 3096925 YP_112072.1 CDS BPSS2069 NC_006351.1 2804379 2805242 R Similar to Rhizobium loti ABC transporter ATP-binding protein mll7373 SWALL:Q986G1 (EMBL:AP003011) (243 aa) fasta scores: E(): 6.7e-53, 65.56% id in 241 aa, and to the C-terminal region of Escherichia coli ribose transport ATP-binding protein RbsA SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 1.8e-27, 41.07% id in 241 aa. CDS is extended at the N-terminus in comparison to orthologues; ABC transporter ATP-binding protein complement(2804379..2805242) Burkholderia pseudomallei K96243 3096926 YP_112073.1 CDS BPSS2070 NC_006351.1 2805239 2806207 R Similar to Escherichia coli ribose transport system permease RbsC SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 2.7e-21, 29.39% id in 296 aa, and to Rhizobium meliloti ABC transporter permease ra0034 or sma0070 SWALL:Q931B0 (EMBL:AE007198) (327 aa) fasta scores: E(): 1.1e-72, 63.07% id in 325 aa; branched-chain amino acid transport system permease complement(2805239..2806207) Burkholderia pseudomallei K96243 3096010 YP_112074.1 CDS BPSS2071 NC_006351.1 2806228 2807226 R Similar to Escherichia coli D-allose-binding periplasmic protein precursor AlsB SWALL:ALSB_ECOLI (SWALL:P39265) (311 aa) fasta scores: E(): 2.2e-05, 23.74% id in 278 aa, and to Rhizobium loti hypothetical protein mll7376 SWALL:Q986F9 (EMBL:AP003011) (325 aa) fasta scores: E(): 1.2e-74, 59.94% id in 332 aa; hypothetical protein complement(2806228..2807226) Burkholderia pseudomallei K96243 3095110 YP_112075.1 CDS BPSS2072 NC_006351.1 2807264 2808466 R Similar to Rhizobium loti hypothetical protein mll7377 SWALL:Q986F8 (EMBL:AP003011) (400 aa) fasta scores: E(): 4.6e-115, 71.17% id in 399 aa. Weakly similar to Escherichia coli starvation sensing protein RspA SWALL:RSPA_ECOLI (SWALL:P38104) (404 aa) fasta scores: E(): 1.6e-18, 24.68% id in 393 aa; mandelate racemase complement(2807264..2808466) Burkholderia pseudomallei K96243 3095111 YP_112076.1 CDS BPSS2073 NC_006351.1 2808477 2809190 R Similar to Agrobacterium tumefaciens GntR family transcriptional regulator ATU0271 or AGR_C_464 SWALL:Q8UIM2 (EMBL:AE008999) (235 aa) fasta scores: E(): 5.4e-31, 43.36% id in 226 aa, and to Rhizobium loti transcriptional regulator mll7378 SWALL:Q986F7 (EMBL:AP003011) (224 aa) fasta scores: E(): 1e-29, 44.59% id in 222 aa; GntR family transcriptional regulator complement(2808477..2809190) Burkholderia pseudomallei K96243 3095711 YP_112077.1 CDS BPSS2074 NC_006351.1 2809322 2810212 D Similar to Oryctolagus cuniculus senescence marker protein-30 RGM or SMP30 SWALL:SM30_RABIT (SWALL:Q9TTJ6) (299 aa) fasta scores: E(): 2.7e-21, 29.73% id in 296 aa, and to Rhizobium loti regucalcin homolog mlr7379 SWALL:Q986F6 (EMBL:AP003011) (301 aa) fasta scores: E(): 1.7e-37, 40.83% id in 289 aa; senescence marker protein-30 (SMP-30) family protein 2809322..2810212 Burkholderia pseudomallei K96243 3095712 YP_112078.1 CDS BPSS2075 NC_006351.1 2810654 2811283 R Similar to Pseudomonas putida hypothetical protein SWALL:Q9R9V2 (EMBL:AJ245436) (192 aa) fasta scores: E(): 4.8e-23, 41.43% id in 181 aa, and to Rhizobium sp. hypothetical protein Y4hQ SWALL:Y4HQ_RHISN (SWALL:P50361) (194 aa) fasta scores: E(): 1.3e-17, 35.23% id in 193 aa. Possible alternative translational start site; hypothetical protein complement(2810654..2811283) Burkholderia pseudomallei K96243 3094925 YP_112079.1 CDS BPSS2078 NC_006351.1 2812870 2813217 R Similar to Escherichia coli hypothetical protein Hp4 SWALL:O88118 (EMBL:AF081284) (115 aa) fasta scores: E(): 3.5e-32, 69.56% id in 115 aa, and to Shigella flexneri 2a hypothetical protein SWALL:Q93F14 (EMBL:AF326777) (115 aa) fasta scores: E(): 1.5e-31, 67.82% id in 115 aa; hypothetical protein complement(2812870..2813217) Burkholderia pseudomallei K96243 3095976 YP_112080.1 CDS BPSS2079 NC_006351.1 2813214 2813621 R Similar to Escherichia coli hypothetical protein L0013 SWALL:O85620 (EMBL:AF071034) (133 aa) fasta scores: E(): 1.8e-10, 36.76% id in 136 aa, and to Shigella flexneri 2a hypothetical protein SWALL:Q93F13 (EMBL:AF326777) (133 aa) fasta scores: E(): 3.2e-10, 36.76% id in 136 aa; DNA-binding protein complement(2813214..2813621) Burkholderia pseudomallei K96243 3095977 YP_112081.1 CDS BPSS2080 NC_006351.1 2814054 2816087 R hypothetical protein complement(2814054..2816087) Burkholderia pseudomallei K96243 3095034 YP_112082.1 CDS BPSS2081 NC_006351.1 2816328 2818499 R Similar to Escherichia coli alpha-galactosidase RafA SWALL:RAFA_ECOLI (SWALL:P16551) (708 aa) fasta scores: E(): 2.3e-105, 39.97% id in 718 aa, and to Yersinia pestis alpha-galactosidase ypo1581 SWALL:Q8ZFU7 (EMBL:AJ414149) (708 aa) fasta scores: E(): 3.6e-108, 40.16% id in 712 aa; alpha-galactosidase complement(2816328..2818499) Burkholderia pseudomallei K96243 3095353 YP_112083.1 CDS BPSS2082 NC_006351.1 2818504 2819355 R Similar to Rhizobium meliloti ABC transporter permease ra1243 or sma2309 SWALL:Q92XK1 (EMBL:AE007309) (273 aa) fasta scores: E(): 1.1e-63, 56.08% id in 271 aa, and to Thermus sp. T2 permease SWALL:O54314 (EMBL:Z93773) (274 aa) fasta scores: E(): 1.6e-44, 45.34% id in 258 aa; ABC transporter permease complement(2818504..2819355) Burkholderia pseudomallei K96243 3095354 YP_112084.1 CDS BPSS2083 NC_006351.1 2819356 2820309 R Similar to Rhizobium meliloti ABC transporter permease ra1242 or sma2307 SWALL:Q92XK2 (EMBL:AE007309) (307 aa) fasta scores: E(): 3.5e-53, 51.08% id in 276 aa, and to Listeria monocytogenes, and Listeria innocua hypothetical protein lmo0179 or lin0218 SWALL:Q92F88 (EMBL:AL591973) (292 aa) fasta scores: E(): 1.4e-31, 34.83% id in 267 aa. CDS is extended at the N-terminus in comparison to orthologues; ABC transporter permease complement(2819356..2820309) Burkholderia pseudomallei K96243 3095921 YP_112085.1 CDS BPSS2084 NC_006351.1 2820342 2821583 R Similar to Bradyrhizobium japonicum Blr3389 protein blr3389 SWALL:BAC48654 (EMBL:AP005947) (420 aa) fasta scores: E(): 1.3e-19, 25.18% id in 417 aa. N-terminus is weakly similar to the N-terminal region of Streptococcus mutans multiple sugar-binding protein precursor MsmE SWALL:MSME_STRMU (SWALL:Q00749) (420 aa) fasta scores: E(): 1.3e-11, 24.66% id in 373 aa; extracellular solute-binding protein complement(2820342..2821583) Burkholderia pseudomallei K96243 3095922 YP_112086.1 CDS BPSS2085 NC_006351.1 2821619 2822863 R No significant database matches to the full length CDS. C-terminal region is similar to Escherichia coli maltose/maltodextrin transport ATP-binding protein MalK SWALL:MALK_ECOLI (SWALL:P02914) (371 aa) fasta scores: E(): 3.4e-59, 50.8% id in 374 aa, and to Vibrio cholerae maltose/maltodextrin ABC transporter ATP-binding protein vca0946 SWALL:Q9KL04 (EMBL:AE004421) (373 aa) fasta scores: E(): 1.6e-62, 51.75% id in 371 aa. CDS is extended at the C-terminus in comparison to orthologues. Similar to BPSL0833, 51.482% identity (52.909% ungapped) in 371 aa overlap; ABC transporter ATP-binding protein complement(2821619..2822863) Burkholderia pseudomallei K96243 3095886 YP_112087.1 CDS BPSS2086 NC_006351.1 2822906 2824966 R hypothetical protein complement(2822906..2824966) Burkholderia pseudomallei K96243 3096793 YP_112088.1 CDS BPSS2087 NC_006351.1 2825317 2826375 R Similar to Escherichia coli and Shigella flexneri transcriptional repressor CytR SWALL:CYTR_ECOLI (SWALL:P06964) (341 aa) fasta scores: E(): 1.1e-26, 31.95% id in 338 aa, and to Thermoanaerobacter tengcongensis transcriptional regulator tte2576 SWALL:Q8R748 (EMBL:AE013198) (341 aa) fasta scores: E(): 2.8e-33, 36.17% id in 340 aa; LacI family regulatory protein complement(2825317..2826375) Burkholderia pseudomallei K96243 3096794 YP_112089.1 CDS BPSS2089 NC_006351.1 2827766 2828551 D hypothetical protein 2827766..2828551 Burkholderia pseudomallei K96243 3096481 YP_112090.1 CDS BPSS2090 NC_006351.1 2829283 2829711 R Poor database matches. Similar to an internal region of Ralstonia solanacearum transposase rsc3179 or rs06078 SWALL:Q8XUK9 (EMBL:AL646074) (363 aa) fasta scores: E(): 1.8e-12, 37.64% id in 170 aa. Possible gene remnant. Similar to an internal region of PSS2051, 61.611% identity (75.581% ungapped) in 211 aa overlap; DNA-binding protein complement(2829283..2829711) Burkholderia pseudomallei K96243 3095507 YP_112091.1 CDS BPSS2091 NC_006351.1 2829708 2830487 R Possible gene remnant. No significant database matches. N-terminus is similar to the N-terminal regions of Yersinia pestis hypothetical protein ypo0762 SWALL:Q8ZHW7 (EMBL:AJ414144) (1438 aa) fasta scores: E(): 3.5e-18, 34.19% id in 193 aa, and Escherichia coli RhsD protein precursor b0497 SWALL:RHSD_ECOLI (SWALL:P16919) (1426 aa) fasta scores: E(): 2.4e-11, 33.15% id in 184 aa. N-terminal region is similar to an internal region of BPSS2054, 62.366% identity (62.366% ungapped) in 186 aa overlap; hypothetical protein complement(2829708..2830487) Burkholderia pseudomallei K96243 3096798 YP_112092.1 CDS BPSS2093 NC_006351.1 2831227 2833431 R Similar to Pseudomonas aeruginosa hypothetical protein pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 9.6e-108, 42.52% id in 722 aa, and to Rhizobium loti hypothetical protein mll2357 SWALL:Q98IK7 (EMBL:AP002999) (775 aa) fasta scores: E(): 6.8e-92, 39.68% id in 751 aa. Similar to BPSS2056, 80.245% identity (80.245% ungapped) in 734 aa overlap; hypothetical protein complement(2831227..2833431) Burkholderia pseudomallei K96243 3095598 YP_112093.1 CDS BPSS2094 NC_006351.1 2833428 2836094 R Similar to Escherichia coli ATPase subunit of an intracellular ATP-dependent protease ClpB or HtpM SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 1.1e-92, 38.66% id in 869 aa, and to Yersinia pestis Clp ATPase ypo2946 SWALL:Q8ZCN5 (EMBL:AJ414154) (891 aa) fasta scores: E(): 5.8e-161, 56.37% id in 855 aa. Similar to BPSL3101, 53.114% identity (53.539% ungapped) in 883 aa overlap, and to BPSS0174, 55.792% identity (60.624% ungapped) in 941 aa overlap, and to BPSS0116, 57.931% identity (58.810% ungapped) in 870 aa overlap; Clp protease ATPase complement(2833428..2836094) Burkholderia pseudomallei K96243 3095599 YP_112094.1 CDS BPSS2095 NC_006351.1 2836073 2837551 R Similar to Xanthomonas axonopodis hypothetical protein xac4141 SWALL:AAM38976 (EMBL:AE012064) (346 aa) fasta scores: E(): 2.7e-18, 38.75% id in 400 aa, and to Pseudomonas aeruginosa hypothetical protein pa0089 SWALL:Q9I743 (EMBL:AE004447) (348 aa) fasta scores: E(): 6.4e-17, 41.93% id in 372 aa. Possible alternative translational start site; hypothetical protein complement(2836073..2837551) Burkholderia pseudomallei K96243 3096392 YP_112095.1 CDS BPSS2096 NC_006351.1 2837548 2839419 R Similar to Pseudomonas aeruginosa hypothetical protein pa0088 SWALL:Q9I744 (EMBL:AE004447) (619 aa) fasta scores: E(): 4.4e-110, 47.77% id in 628 aa, and to Xanthomonas axonopodis hypothetical protein xac4142 SWALL:AAM38977 (EMBL:AE012064) (627 aa) fasta scores: E(): 9.1e-109, 46.74% id in 629 aa; hypothetical protein complement(2837548..2839419) Burkholderia pseudomallei K96243 3095467 YP_112096.1 CDS BPSS2097 NC_006351.1 2839424 2839960 R Similar to Xanthomonas axonopodis hypothetical protein xac4143 SWALL:AAM38978 (EMBL:AE012064) (167 aa) fasta scores: E(): 4.3e-18, 40.96% id in 166 aa, and to Pseudomonas aeruginosa hypothetical protein pa0087 SWALL:Q9I745 (EMBL:AE004447) (169 aa) fasta scores: E(): 7.9e-18, 44.93% id in 158 aa; hypothetical protein complement(2839424..2839960) Burkholderia pseudomallei K96243 3095468 YP_112097.1 CDS BPSS2098 NC_006351.1 2839991 2840482 R Similar to Pseudomonas aeruginosa hypothetical protein pa0085 SWALL:Q9I747 (EMBL:AE004447) (162 aa) fasta scores: E(): 5.4e-19, 40.24% id in 164 aa, and to Bradyrhizobium japonicum hypothetical protein bll3592 SWALL:BAC48857 (EMBL:AP005948) (161 aa) fasta scores: E(): 1.5e-18, 40.12% id in 162 aa; hypothetical protein complement(2839991..2840482) Burkholderia pseudomallei K96243 3095171 YP_112098.1 CDS BPSS2099 NC_006351.1 2840542 2842050 R Similar to Pseudomonas aeruginosa hypothetical protein pa0084 SWALL:Q9I748 (EMBL:AE004447) (498 aa) fasta scores: E(): 3.9e-153, 72.83% id in 497 aa, and to Yersinia pestis hypothetical protein ypo2938 SWALL:Q8ZCP0 (EMBL:AJ414154) (500 aa) fasta scores: E(): 7e-153, 72.52% id in 495 aa. Similar to BPSS0098, 73.642% identity (73.790% ungapped) in 497 aa overlap, and to BPSS0172, 72.233% identity (72.672% ungapped) in 497 aa overlap, and to BPSS0517, 61.290% identity (61.414% ungapped) in 496 aa overlap; hypothetical protein complement(2840542..2842050) Burkholderia pseudomallei K96243 3095172 YP_112099.1 CDS BPSS2100 NC_006351.1 2842043 2842621 R Similar to Pseudomonas aeruginosa hypothetical protein Pa0083 SWALL:Q9I749 (EMBL:AE004447) (172 aa) fasta scores: E(): 2.7e-40, 68.82% id in 170 aa, and to Xanthomonas axonopodis hypothetical protein Xac4147 SWALL:AAM38982 (EMBL:AE012065) (169 aa) fasta scores: E(): 2e-38, 69.64% id in 168 aa, and to Salmonella typhi hypothetical protein Sty0297 SWALL:Q8Z970 (EMBL:AL627266) (180 aa) fasta scores: E(): 8.8e-38, 65.66% id in 166 aa. Similar to BPSS0097, 69.643% identity (70.482% ungapped) in 168 aa overlap, and to BPSS0173, 65.934% identity (65.934% ungapped) in 182 aa overlap; hypothetical protein complement(2842043..2842621) Burkholderia pseudomallei K96243 3096765 YP_112100.1 CDS BPSS2101 NC_006351.1 2842684 2843763 R Similar to Xanthomonas axonopodis hypothetical protein Xac4112 SWALL:AAM38947 (EMBL:AE012060) (347 aa) fasta scores: E(): 5.7e-23, 38.96% id in 367 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0082 SWALL:Q9I750 (EMBL:AE004447) (344 aa) fasta scores: E(): 3.8e-18, 35.79% id in 366 aa, and to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0266 or sciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 1.4e-13, 31.94% id in 360 aa; hypothetical protein complement(2842684..2843763) Burkholderia pseudomallei K96243 3095432 YP_112101.1 CDS BPSS2102 NC_006351.1 2843816 2846431 R No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Deinococcus radiodurans protein kinase dra0332 SWALL:Q9RYI0 (EMBL:AE001863) (524 aa) fasta scores: E(): 5.9e-16, 34.49% id in 403 aa. Internal region is weakly similar to an internal region of Streptomyces coelicolor multi-domain regulatory protein SCO2259 or SCC75A.05C SWALL:Q9RKR9 (EMBL:AL939112) (1334 aa) fasta scores: E(): 1.2e-07, 28.92% id in 491 aa; protein kinase complement(2843816..2846431) Burkholderia pseudomallei K96243 3095433 YP_112102.1 CDS BPSS2103 NC_006351.1 2846642 2847574 R Similar to N-terminus of Pseudomonas aeruginosa hypothetical protein Pa0076 SWALL:Q9I756 (EMBL:AE004446) (226 aa) fasta scores: E(): 1.6e-05, 36.17% id in 141 aa, and to N-terminus of Rhizobium leguminosarum ImpM SWALL:Q93EC1 (EMBL:AF361470) (457 aa) fasta scores: E(): 2.4e-05, 28.98% id in 207 aa; hypothetical protein complement(2846642..2847574) Burkholderia pseudomallei K96243 3097180 YP_112103.1 CDS BPSS2104 NC_006351.1 2847580 2851209 R Similar to Vibrio cholerae IcmF-related protein vca0120 or IcmF SWALL:Q9KN45 (EMBL:AE004353) (1181 aa) fasta scores: E(): 6.1e-46, 26.92% id in 1237 aa, and to Rhizobium loti hypothetical protein Mlr2360 SWALL:Q98IK4 (EMBL:AP002999) (1176 aa) fasta scores: E(): 3e-103, 33.08% id in 1209 aa, and to Xanthomonas axonopodis hypothetical protein Xac4119 SWALL:AAM38954 (EMBL:AE012061) (1176 aa) fasta scores: E(): 2.2e-77, 34.27% id in 1205 aa; hypothetical protein complement(2847580..2851209) Burkholderia pseudomallei K96243 3097181 YP_112104.1 CDS BPSS2105 NC_006351.1 2851212 2852528 R Similar to Rhizobium leguminosarum ImpK SWALL:Q93EC3 (EMBL:AF361470) (510 aa) fasta scores: E(): 5.2e-19, 33.03% id in 451 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0078 SWALL:Q9I754 (EMBL:AE004447) (449 aa) fasta scores: E(): 5.4e-63, 47.12% id in 452 aa, and to Xanthomonas axonopodis hypothetical protein Xac4120 SWALL:Q8PF65 (EMBL:AE012061) (451 aa) fasta scores: E(): 1.2e-45, 40.29% id in 412 aa; hypothetical protein complement(2851212..2852528) Burkholderia pseudomallei K96243 3095757 YP_112105.1 CDS BPSS2106 NC_006351.1 2852544 2853932 R Similar to Pseudomonas aeruginosa hypothetical protein Pa0079 SWALL:Q9I753 (EMBL:AE004447) (444 aa) fasta scores: E(): 1.8e-58, 49.88% id in 451 aa, and to Yersinia pestis hypothetical protein ypo2934 or y1549 SWALL:Q8ZCP3 (EMBL:AJ414154) (449 aa) fasta scores: E(): 1.2e-54, 37% id in 454 aa, and to Xanthomonas axonopodis hypothetical protein Xac4121 SWALL:AAM38956 (EMBL:AE012061) (444 aa) fasta scores: E(): 1e-53, 46.44% id in 450 aa; hypothetical protein complement(2852544..2853932) Burkholderia pseudomallei K96243 3095960 YP_112106.1 CDS BPSS2107 NC_006351.1 2853944 2854462 R Similar to Salmonella typhimurium outer membrane lipoprotein stm0280 SWALL:Q8ZRL4 (EMBL:AE008707) (178 aa) fasta scores: E(): 2.5e-15, 37.95% id in 166 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciN protein precursor SWALL:Q93IS2 (EMBL:AJ320483) (163 aa) fasta scores: E(): 3.1e-15, 38.96% id in 154 aa, and to Salmonella typhi probable lipoprotein sty0303 SWALL:Q8Z967 (EMBL:AL627266) (178 aa) fasta scores: E(): 3.4e-15, 40.37% id in 161 aa; hypothetical protein complement(2853944..2854462) Burkholderia pseudomallei K96243 3095961 YP_112107.1 CDS BPSS2108 NC_006351.1 2855102 2855503 D Similar to Bordetella parapertussis lipoprotein SWALL:Q7W1G3 (EMBL:BX640425) (131 aa) fasta scores: E(): 6.1e-11, 41.07% id in 112 aa, and to Bordetella bronchiseptica lipoprotein SWALL:Q7WP73 (EMBL:BX640439) (131 aa) fasta scores: E(): 6.1e-11, 41.07% id in 112 aa; lipoprotein 2855102..2855503 Burkholderia pseudomallei K96243 3097247 YP_112108.1 CDS BPSS2109 NC_006351.1 2855558 2856994 D Similar to Pseudomonas aeruginosa hypothetical protein Pa0081 SWALL:Q9I751 (EMBL:AE004447) (497 aa) fasta scores: E(): 3e-14, 28.71% id in 491 aa, and to Rhizobium loti hypothetical protein Mlr2345 SWALL:Q98IL9 (EMBL:AP002999) (486 aa) fasta scores: E(): 5.3e-11, 27.13% id in 468 aa, and to Xanthomonas axonopodis hypothetical protein Xac4122 SWALL:AAM38957 (EMBL:AE012061) (438 aa) fasta scores: E(): 8.7e-11, 25.54% id in 462 aa; FHA-family protein 2855558..2856994 Burkholderia pseudomallei K96243 3097248 YP_112109.1 CDS BPSS2110 NC_006351.1 2857037 2858941 R Similar to Xylella fastidiosa hypothetical protein Xf1451 SWALL:Q9PDC8 (EMBL:AE003975) (636 aa) fasta scores: E(): 1.5e-39, 28.15% id in 618 aa, and to Xanthomonas axonopodis hypothetical protein Xac2007 SWALL:AAM36869 (EMBL:AE011836) (642 aa) fasta scores: E(): 4.2e-38, 27.45% id in 641 aa, and to Xanthomonas campestris hypothetical protein Xcc1973 SWALL:AAM41262 (EMBL:AE012301) (642 aa) fasta scores: E(): 1.5e-36, 27.07% id in 628 aa; hypothetical protein complement(2857037..2858941) Burkholderia pseudomallei K96243 3095064 YP_112110.1 CDS BPSS2111 NC_006351.1 2859411 2860655 D Similar to Bradyrhizobium japonicum USDA 110 BLL2502 protein SWALL:Q89SA3 (EMBL:AP005944) (428 aa) fasta scores: E(): 9.2e-53, 42.39% id in 401 aa, and to Rhodopseudomonas palustris possible FAD-dependent monooxygenase SWALL:Q6N3V5 (EMBL:BX572604) (430 aa) fasta scores: E(): 2.6e-44, 37.79% id in 426 aa; hypothetical protein 2859411..2860655 Burkholderia pseudomallei K96243 3095032 YP_112111.1 CDS BPSS2113 NC_006351.1 2861331 2861507 D hypothetical protein 2861331..2861507 Burkholderia pseudomallei K96243 3095076 YP_112112.1 CDS BPSS2114 NC_006351.1 2861989 2862693 R Similar to Achromobacter xylosoxidans oxidoreductase SWALL:Q8RMC9 (EMBL:AJ431208) (234 aa) fasta scores: E(): 4.1e-44, 54.7% id in 234 aa, and to Bradyrhizobium japonicum oxidoreductase bll5294 SWALL:BAC50559 (EMBL:AP005954) (234 aa) fasta scores: E(): 1.7e-41, 52.56% id in 234 aa, and to Rhizobium meliloti oxidoreductase r01874 or smc00136 SWALL:Q92PA5 (EMBL:AL591788) (234 aa) fasta scores: E(): 3.3e-41, 50.42% id in 234 aa; oxidoreductase/short-chain dehydrogenase complement(2861989..2862693) Burkholderia pseudomallei K96243 3095077 YP_112113.1 CDS BPSS2115 NC_006351.1 2862875 2863789 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 4.9e-35, 40.94% id in 298 aa, and to Rhizobium loti probable transcriptional regulator mlr1832 SWALL:Q98JQ4 (EMBL:AP002998) (299 aa) fasta scores: E(): 3.6e-54, 54.93% id in 284 aa, and to Rhizobium loti glycine cleavage system transcription activator mlr1973 SWALL:Q98JE9 (EMBL:AP002998) (303 aa) fasta scores: E(): 2.4e-37, 40.78% id in 304 aa; LysR family transcriptional regulator 2862875..2863789 Burkholderia pseudomallei K96243 3094962 YP_112114.1 CDS dsdA NC_006351.1 2864045 2865382 R catalyzes the formation of pyruvate from serine; D-serine dehydratase complement(2864045..2865382) Burkholderia pseudomallei K96243 3096802 YP_112115.1 CDS BPSS2117 NC_006351.1 2865479 2866420 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 2.1e-26, 35.48% id in 310 aa, and to Caulobacter crescentus transcriptional regulator, LysR family cc1117 SWALL:Q9A977 (EMBL:AE005790) (340 aa) fasta scores: E(): 2.3e-27, 37.01% id in 308 aa; LysR family transcriptional regulator 2865479..2866420 Burkholderia pseudomallei K96243 3097152 YP_112116.1 CDS BPSS2117A NC_006351.1 2866651 2866956 R Similar to Rhodopseudomonas palustris hypothetical protein SWALL:Q6N615 (EMBL:BX572602) (107 aa) fasta scores: E(): 1.5e-08, 35.05% id in 97 aa, and to Gloeobacter violaceus PCC 7421 GLL2745 protein SWALL:Q7NGZ2 (EMBL:AP006577) (104 aa) fasta scores: E(): 1.3e-07, 38.94% id in 95 aa; hypothetical protein complement(2866651..2866956) Burkholderia pseudomallei K96243 3097153 YP_112117.1 CDS BPSS2118 NC_006351.1 2867429 2868121 R Similar to Streptomyces peucetius ORF1 and ORF2 SWALL:Q9ZF16 (EMBL:AJ005575) (226 aa) fasta scores: E(): 2.6e-27, 42.08% id in 221 aa, and to Mycobacterium tuberculosis hypothetical 23.8 kDa protein rv1674c or mtv047.09c or mt1712 SWALL:O53921 (EMBL:AL022002) (218 aa) fasta scores: E(): 7e-36, 51.83% id in 218 aa; transcription regulator ArsR complement(2867429..2868121) Burkholderia pseudomallei K96243 3095045 YP_112118.1 CDS BPSS2119 NC_006351.1 2868176 2868916 D Similar to N-terminus of Methanosarcina acetivorans metallo-beta-lactamase ma1794 SWALL:Q8TPW0 (EMBL:AE010859) (481 aa) fasta scores: E(): 5e-25, 36.75% id in 234 aa, and to entire protein of Sulfolobus solfataricus hypothetical protein sso2072 sso2072 or c06001 SWALL:P95849 (EMBL:Y08256) (247 aa) fasta scores: E(): 3.1e-29, 44.49% id in 236 aa, and to entire protein of Sulfolobus tokodaii hypothetical protein St1629 st1629 SWALL:Q970G3 (EMBL:AP000987) (246 aa) fasta scores: E(): 9.8e-29, 42.41% id in 224 aa; metallo-beta-lactamase 2868176..2868916 Burkholderia pseudomallei K96243 3095046 YP_112119.1 CDS BPSS2120 NC_006351.1 2868936 2870162 D Similar to Streptococcus pneumoniae, and Streptococcus pneumoniae multi-drug resistance efflux pump PmrA or sp0972 or spr0875 SWALL:PMRA_STRPN (SWALL:Q9ZEX9) (399 aa) fasta scores: E(): 9.6e-08, 23.82% id in 382 aa, and to Halobacterium sp. similar to sulfolobus solfactaricus orf c06004 vng6457c or vng6068C SWALL:O54630 (EMBL:AF016485) (421 aa) fasta scores: E(): 6.1e-58, 39.9% id in 401 aa, and to Sulfolobus solfataricus transport protein, sso2074 SWALL:Q97WP8 (EMBL:AE006814) (366 aa) fasta scores: E(): 2.4e-13, 28.93% id in 394 aa; sugar transport/efflux pump 2868936..2870162 Burkholderia pseudomallei K96243 3094940 YP_112120.1 CDS BPSS2121 NC_006351.1 2870209 2871330 D Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri cysteine desulfurase IscS or b2530 or c3056 or z3797 or ecs3396 or sf2577 SWALL:ISCS_ECOLI (SWALL:P39171) (404 aa) fasta scores: E(): 1.1e-52, 46.19% id in 368 aa, and to Thermoanaerobacter tengcongensis cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes NifS2 or tte2465 SWALL:Q8R7E9 (EMBL:AE013188) (384 aa) fasta scores: E(): 2.7e-54, 44.94% id in 376 aa, and to Methanosarcina thermophila probable cysteine desulfurase IscS or NifS SWALL:ISCS_METTE (SWALL:P57795) (404 aa) fasta scores: E(): 5.5e-53, 45.3% id in 373 aa; cysteine desulfurase 2870209..2871330 Burkholderia pseudomallei K96243 3097190 YP_112121.1 CDS BPSS2122 NC_006351.1 2871821 2872219 R hypothetical protein complement(2871821..2872219) Burkholderia pseudomallei K96243 3097191 YP_112122.1 CDS BPSS2123 NC_006351.1 2872672 2874006 D Similar to Streptomyces avermitilis MFS transporter SWALL:Q829Y1 (EMBL:AP005046) (434 aa) fasta scores: E(): 6.7e-58, 42.27% id in 414 aa, and to Pseudomonas aeruginosa probable MFS transporter SWALL:Q9HY31 (EMBL:AE004780) (469 aa) fasta scores: E(): 2e-63, 45.16% id in 434 aa; transporter protein 2872672..2874006 Burkholderia pseudomallei K96243 3097053 YP_112123.1 CDS BPSS2124 NC_006351.1 2874595 2875518 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.1e-20, 33.11% id in 305 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2383 SWALL:Q9I196 (EMBL:AE004664) (306 aa) fasta scores: E(): 7e-54, 53.46% id in 303 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2665 or rs04540 SWALL:Q8XW10 (EMBL:AL646071) (296 aa) fasta scores: E(): 2.2e-32, 43.53% id in 294 aa; LysR family transcriptional regulator 2874595..2875518 Burkholderia pseudomallei K96243 3097054 YP_112124.1 CDS lldA NC_006351.1 2875583 2876725 D Similar to Neisseria meningitidis L-lactate dehydrogenase LldA or nma1592 SWALL:Q9JTX1 (EMBL:AL162756) (390 aa) fasta scores: E(): 8.4e-92, 61.93% id in 373 aa, and to Pseudomonas aeruginosa L-lactate dehydrogenase LldA or pa2382 SWALL:Q9I197 (EMBL:AE004664) (383 aa) fasta scores: E(): 1.4e-103, 72.41% id in 377 aa, and to Agrobacterium tumefaciens L-lactate dehydrogenase LldA or atu2318 or agr_c_4216 SWALL:Q8UD10 (EMBL:AE009181) (382 aa) fasta scores: E(): 3.7e-94, 64.17% id in 374 aa; L-lactate dehydrogenase 2875583..2876725 Burkholderia pseudomallei K96243 3095025 YP_112125.1 CDS BPSS2126 NC_006351.1 2876902 2877750 R Similar to Burkholderia cepacia 2,4-dinitrotoluene oxygenase DntG SWALL:Q8VUC7 (EMBL:AF169302) (281 aa) fasta scores: E(): 1e-27, 37.5% id in 272 aa, and to Yersinia pestis hydrolase ypo1566 or y2599 SWALL:Q8ZFW1 (EMBL:AJ414149) (280 aa) fasta scores: E(): 5.5e-79, 69.42% id in 278 aa, and to Brucella melitensis 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase bmei1708 SWALL:Q8YF19 (EMBL:AE009604) (301 aa) fasta scores: E(): 1.5e-72, 63.92% id in 280 aa; FAA-hydrolase complement(2876902..2877750) Burkholderia pseudomallei K96243 3095071 YP_112126.1 CDS BPSS2127 NC_006351.1 2878261 2879085 D Similar to Escherichia coli transcriptional regulator KdgR or b1827 SWALL:KDGR_ECOLI (SWALL:P76268) (263 aa) fasta scores: E(): 1.3e-08, 26.86% id in 242 aa, and to Rhizobium meliloti transcriptional regulator protein rb0681 or smb21102 SWALL:Q92VL9 (EMBL:AL603644) (260 aa) fasta scores: E(): 1.2e-41, 49.6% id in 256 aa. CDS is extended at the N-terminus in comparison to similar proteins; IclR family transcriptional regulator 2878261..2879085 Burkholderia pseudomallei K96243 3094923 YP_112127.1 CDS BPSS2128 NC_006351.1 2879391 2880794 D catalyzes the formation of indole-3-acetic acid from indole-3-acetamide; indole acetimide hydrolase 2879391..2880794 Burkholderia pseudomallei K96243 3094924 YP_112128.1 CDS BPSS2129 NC_006351.1 2880980 2881531 D hypothetical protein 2880980..2881531 Burkholderia pseudomallei K96243 3094992 YP_112129.1 CDS BPSS2130 NC_006351.1 2882057 2884420 R Similar to Pyrococcus furiosus acetyl-CoA synthetase AcdA or pf1540 SWALL:Q9Y8L1 (EMBL:AJ240061) (462 aa) fasta scores: E(): 3.9e-24, 30.9% id in 453 aa, and to Rhizobium loti hypothetical protein Mlr6591 SWALL:Q988U3 (EMBL:AP003009) (893 aa) fasta scores: E(): 1.3e-34, 33.88% id in 903 aa, and to Rhizobium meliloti hypothetical protein ra0619 or sma1146 SWALL:Q92Z73 (EMBL:AE007251) (899 aa) fasta scores: E(): 1.4e-32, 31.22% id in 903 aa; acetyl-CoA synthetase complement(2882057..2884420) Burkholderia pseudomallei K96243 3094993 YP_112130.1 CDS BPSS2131 NC_006351.1 2885962 2886252 R Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 1.6e-13, 50.51% id in 97 aa; hypothetical protein complement(2885962..2886252) Burkholderia pseudomallei K96243 3095154 YP_112131.1 CDS BPSS2131a NC_006351.1 2886355 2886504 R hypothetical protein complement(2886355..2886504) Burkholderia pseudomallei K96243 3095344 YP_112132.1 CDS BPSS2131b NC_006351.1 2886710 2887267 R Similar to Chromobacterium violaceum hypothetical protein CV3234 SWALL:Q7NT30 (EMBL:AE016921) (179 aa) fasta scores: E(): 6.4e-22, 43.94% id in 157 aa; hypothetical protein complement(2886710..2887267) Burkholderia pseudomallei K96243 3095345 YP_112133.1 CDS BPSS2132 NC_006351.1 2887571 2889091 R Similar to Burkholderia sp. RP007 transcriptional regulator PhnR SWALL:Q9ZHH9 (EMBL:AF061751) (562 aa) fasta scores: E(): 5e-35, 40.37% id in 374 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2005 SWALL:Q9I2A4 (EMBL:AE004627) (481 aa) fasta scores: E(): 2.6e-81, 58.6% id in 488 aa, and to Bacillus halodurans transcriptional regulator bh3899 SWALL:Q9K633 (EMBL:AP001520) (559 aa) fasta scores: E(): 1.7e-41, 35.3% id in 473 aa; Fis family transcriptional regulator complement(2887571..2889091) Burkholderia pseudomallei K96243 3095355 YP_112134.1 CDS BPSS2133 NC_006351.1 2889396 2890799 D Similar to Ralstonia solanacearum hypothetical transmembrane protein RS01064 SWALL:Q8XWF6 (EMBL:AL646070) (466 aa) fasta scores: E(): 5.3e-124, 73.19% id in 470 aa, and to Pseudomonas putida membrane protein, SWALL:Q88IC5 (EMBL:AE016785) (463 aa) fasta scores: E(): 2.2e-122, 71.52% id in 467 aa; hypothetical protein 2889396..2890799 Burkholderia pseudomallei K96243 3095356 YP_112135.1 CDS BPSS2134 NC_006351.1 2891157 2891402 D hypothetical protein 2891157..2891402 Burkholderia pseudomallei K96243 3095193 YP_112136.1 CDS BPSS2135 NC_006351.1 2891557 2892549 D Similar to Xanthomonas axonopodis hypothetical protein Xac1749 SWALL:AAM36615 (EMBL:AE011807) (330 aa) fasta scores: E(): 3e-61, 54.25% id in 317 aa, and to Xanthomonas campestris hypothetical protein Xcc1731 SWALL:AAM41024 (EMBL:AE012274) (330 aa) fasta scores: E(): 4.6e-61, 52.87% id in 331 aa, and to Ralstonia solanacearum probable transmembrane protein rsp0396 or rs00824 SWALL:Q8XSS1 (EMBL:AL646078) (326 aa) fasta scores: E(): 2.4e-39, 38.9% id in 329 aa; DedA family transmembrane protein 2891557..2892549 Burkholderia pseudomallei K96243 3095429 YP_112137.1 CDS BPSS2136 NC_006351.1 2892881 2894323 R Similar to Pseudomonas aeruginosa porin D precursor OprD or pa0958 SWALL:PORD_PSEAE (SWALL:P32722) (443 aa) fasta scores: E(): 2.2e-32, 35.58% id in 444 aa, and to Pseudomonas aeruginosa probable porin pa4501 SWALL:Q9HVS0 (EMBL:AE004864) (484 aa) fasta scores: E(): 2.8e-43, 33.66% id in 505 aa; hypothetical protein complement(2892881..2894323) Burkholderia pseudomallei K96243 3095430 YP_112138.1 CDS oppF NC_006351.1 2894499 2895632 R Similar to Salmonella typhimurium oligopeptide transport ATP-binding protein OppF or stm1742 SWALL:OPPF_SALTY (SWALL:P08007) (334 aa) fasta scores: E(): 1e-57, 58.07% id in 322 aa, and to Yersinia pestis oligopeptide transport ATP-binding protein OppF or ypo2186 or y2030 SWALL:Q8ZEI4 (EMBL:AJ414151) (333 aa) fasta scores: E(): 1.1e-58, 59.31% id in 322 aa. CDS is extended at the N-terminus in comparison to orthologues; oligopeptide transport ATP-binding ABC transport protein complement(2894499..2895632) Burkholderia pseudomallei K96243 3097256 YP_112139.1 CDS oppD NC_006351.1 2895629 2896618 R Similar to Salmonella typhimurium oligopeptide transport ATP-binding protein OppD or stm1743 SWALL:OPPD_SALTY (SWALL:P04285) (335 aa) fasta scores: E(): 1.3e-59, 57.45% id in 322 aa, and to Yersinia pestis oligopeptide transport ATP-binding protein OppD or ypo2185 or y2029 SWALL:Q8ZEI5 (EMBL:AJ414151) (333 aa) fasta scores: E(): 2.8e-61, 59% id in 322 aa, and to Salmonella typhi oligopeptide transport ATP-binding protein OppD sty1308 SWALL:Q8Z7E8 (EMBL:AL627269) (335 aa) fasta scores: E(): 8.8e-60, 57.76% id in 322 aa; oligopeptide transport ATP-binding ABC transport protein complement(2895629..2896618) Burkholderia pseudomallei K96243 3097002 YP_112140.1 CDS oppC NC_006351.1 2896620 2897522 R Similar to Salmonella typhimurium oligopeptide transport system permease OppC or stm1744 SWALL:OPPC_SALTY (SWALL:P08006) (302 aa) fasta scores: E(): 1e-56, 54.74% id in 274 aa, and to Vibrio cholerae oligopeptide ABC transporter permease vc1093 SWALL:Q9KT12 (EMBL:AE004190) (300 aa) fasta scores: E(): 2.2e-57, 54.24% id in 271 aa, and to Haemophilus influenzae oligopeptide transport system permease OppC or hi1122 SWALL:OPPC_HAEIN (SWALL:P45053) (311 aa) fasta scores: E(): 7e-57, 54.01% id in 274 aa; oligopeptide transport system permease complement(2896620..2897522) Burkholderia pseudomallei K96243 3095292 YP_112141.1 CDS oppB NC_006351.1 2897534 2898472 R Similar to Salmonella typhimurium oligopeptide transport system permease OppB or stm1745 SWALL:OPPB_SALTY (SWALL:P08005) (306 aa) fasta scores: E(): 1e-59, 48.71% id in 312 aa, and to Yersinia pestis oligopeptide transport system permease OppB or ypo2183 or y2027 SWALL:Q8ZEI7 (EMBL:AJ414151) (306 aa) fasta scores: E(): 2.1e-61, 51.6% id in 312 aa, and to Haemophilus influenzae oligopeptide transport system permease OppB or hi1123 SWALL:OPPB_HAEIN (SWALL:P45054) (306 aa) fasta scores: E(): 8.8e-61, 51.92% id in 312 aa; oligopeptide transport system permease complement(2897534..2898472) Burkholderia pseudomallei K96243 3095291 YP_112142.1 CDS oppA NC_006351.1 2898490 2900154 R Similar to Salmonella typhimurium periplasmic oligopeptide-binding protein precursor OppA or stm1746 SWALL:OPPA_SALTY (SWALL:P06202) (543 aa) fasta scores: E(): 1e-86, 42.93% id in 545 aa, and to Escherichia coli O157:H7 oligopeptide transport, periplasmic binding protein OppA or z2019 or ecs1743 SWALL:Q8XDA4 (EMBL:AE005341) (543 aa) fasta scores: E(): 6.6e-87, 42.75% id in 545 aa; periplasmic oligopeptide-binding protein precursor complement(2898490..2900154) Burkholderia pseudomallei K96243 3095325 YP_112143.1 CDS BPSS2142 NC_006351.1 2900290 2900871 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa4987 SWALL:Q9HUH8 (EMBL:AE004911) (199 aa) fasta scores: E(): 1.2e-15, 35.71% id in 182 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa4499 SWALL:Q9HVS2 (EMBL:AE004863) (187 aa) fasta scores: E(): 5.9e-15, 32.58% id in 178 aa, and to Fusobacterium nucleatum transcriptional regulator, merr family fn1928 SWALL:Q8RHS0 (EMBL:AE010495) (184 aa) fasta scores: E(): 1.6e-13, 31.52% id in 184 aa; MerR family transcriptional regulator complement(2900290..2900871) Burkholderia pseudomallei K96243 3095015 YP_112144.1 CDS BPSS2143 NC_006351.1 2901507 2903009 D Similar to Lactococcus lactis di-/tripeptide transporter DtpT or ll0702 SWALL:DTPT_LACLA (SWALL:P36574) (497 aa) fasta scores: E(): 4e-21, 29.36% id in 453 aa, and to Salmonella typhimurium pot family, peptide transport protein YdgR or stm1452 SWALL:Q8ZPM6 (EMBL:AE008763) (501 aa) fasta scores: E(): 8.5e-68, 39.66% id in 484 aa. Possible alternative translation start site after codon 18; POT-family proton dependent transporter 2901507..2903009 Burkholderia pseudomallei K96243 3095016 YP_112145.1 CDS BPSS2144 NC_006351.1 2903449 2903652 D hypothetical protein 2903449..2903652 Burkholderia pseudomallei K96243 3095149 YP_112146.1 CDS BPSS2145 NC_006351.1 2903723 2905414 R Similar to Streptomyces coelicolor secreted protein sco6608 or sc1f2.05 SWALL:O86542 (EMBL:AL939128) (552 aa) fasta scores: E(): 1.1e-11, 37.06% id in 580 aa, and to Clostridium acetobutylicum uncharaterized conserved protein, YomE b.subtilis ortholog cac2633 SWALL:Q97FU3 (EMBL:AE007760) (354 aa) fasta scores: E(): 1.3e-07, 28.15% id in 238 aa; hypothetical protein complement(2903723..2905414) Burkholderia pseudomallei K96243 3095443 YP_112147.1 CDS BPSS2146 NC_006351.1 2905720 2906661 R Similar to Burkholderia cepacia DntR SWALL:Q8VUD7 (EMBL:AF169302) (301 aa) fasta scores: E(): 1.3e-33, 33.33% id in 297 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu5197 or agr_pat_273 SWALL:Q8UKC6 (EMBL:AE008942) (325 aa) fasta scores: E(): 1.6e-35, 40.61% id in 293 aa, and to Ralstonia sp. U2 LysR-like regular protein NagR SWALL:Q9EXL7 (EMBL:AF036940) (301 aa) fasta scores: E(): 5.3e-34, 33.67% id in 297 aa; LysR family transcriptional regulator complement(2905720..2906661) Burkholderia pseudomallei K96243 3095444 YP_112148.1 CDS BPSS2148 NC_006351.1 2907228 2908088 R IS element protein complement(2907228..2908088) Burkholderia pseudomallei K96243 3095269 YP_112149.1 CDS BPSS2148a NC_006351.1 2908085 2908387 R transposase complement(2908085..2908387) Burkholderia pseudomallei K96243 3095933 YP_112150.1 CDS BPSS2149 NC_006351.1 2908478 2909989 R Similar to Mycobacterium smegmatis hypothetical 50.9 kDa protein SWALL:Q938D1 (EMBL:AY054120) (477 aa) fasta scores: E(): 1.7e-23, 29.83% id in 476 aa, and to Agrobacterium tumefaciens hypothetical protein atu3361 atu3361 or agr_l_2924 SWALL:Q8UAL2 (EMBL:AE009266) (448 aa) fasta scores: E(): 1.8e-21, 32.57% id in 442 aa, and to Methanobacterium thermoautotrophicum conserved protein mth965 SWALL:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 3.2e-21, 32.25% id in 400 aa; MmgE/Prp family protein complement(2908478..2909989) Burkholderia pseudomallei K96243 3095737 YP_112151.1 CDS BPSS2150 NC_006351.1 2909986 2910858 R Similar to Rhodococcus erythropolis citrate lyase SWALL:Q8VQP0 (EMBL:AF453714) (291 aa) fasta scores: E(): 4.1e-21, 33.92% id in 283 aa, and to Streptomyces coelicolor citrate lyase beta chain sco2033 or sc4g6.02 SWALL:Q9S2U9 (EMBL:AL939111) (274 aa) fasta scores: E(): 4e-36, 46.15% id in 273 aa; citrate lyase complement(2909986..2910858) Burkholderia pseudomallei K96243 3095738 YP_112152.1 CDS BPSS2151 NC_006351.1 2910855 2912156 R Similar to Streptomyces coelicolor hypothetical protein sco2032 or sc3a3.10 SWALL:Q9S2Y3 (EMBL:AL939111) (404 aa) fasta scores: E(): 6.1e-99, 63.23% id in 408 aa, and to Caulobacter crescentus hypothetical protein Cc3562 SWALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 3.3e-62, 43.46% id in 398 aa. CDS is extended at the N-terminus in comparison to some orthologues; acyl-CoA transferase complement(2910855..2912156) Burkholderia pseudomallei K96243 3095677 YP_112153.1 CDS BPSS2152 NC_006351.1 2912215 2913381 R Limited similarity to Methylobacterium extorquens alcohol dehydrogenase AdhA SWALL:Q49134 (EMBL:L48340) (432 aa) fasta scores: E(): 0.0066, 21.69% id in 378 aa; zinc-binding dehydrogenase complement(2912215..2913381) Burkholderia pseudomallei K96243 3095678 YP_112154.1 CDS BPSS2153 NC_006351.1 2913435 2914022 R Similar to Streptomyces coelicolor hydrolase sco0748 or scf81.07 SWALL:Q9RJE4 (EMBL:AL939106) (193 aa) fasta scores: E(): 3.4e-31, 52.15% id in 186 aa, and to Salmonella typhimurium, and Salmonella typhi isochorismatase YecD or stm1902 or sty2110 SWALL:Q8XEW8 (EMBL:AE008785) (188 aa) fasta scores: E(): 4.9e-25, 47.25% id in 182 aa, and to Bacillus subtilis hypothetical isochorismatase YwoC SWALL:YWOC_BACSU (SWALL:P94573) (189 aa) fasta scores: E(): 4.9e-24, 48.86% id in 176 aa; isochorismatase complement(2913435..2914022) Burkholderia pseudomallei K96243 3095760 YP_112155.1 CDS BPSS2154 NC_006351.1 2914055 2915485 R Similar to Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 1.5e-23, 28.66% id in 450 aa, and to Bacillus subtilis hypothetical protein YwoD SWALL:P94574 (EMBL:Z82987) (452 aa) fasta scores: E(): 4.7e-41, 32.88% id in 447 aa, and to Burkholderia cepacia major facilitator superfamily transporter homolog SWALL:Q9RPH2 (EMBL:AF158699) (531 aa) fasta scores: E(): 1.3e-25, 29.67% id in 455 aa; major facilitator transporter complement(2914055..2915485) Burkholderia pseudomallei K96243 3095837 YP_112156.1 CDS BPSS2155 NC_006351.1 2916019 2917482 R Similar to Bacillus subtilis arabinose-proton symporter AraE SWALL:ARAE_BACSU (SWALL:P96710) (464 aa) fasta scores: E(): 3.7e-14, 23.21% id in 405 aa, and to Xanthomonas campestris MFS transporter xcc1685 SWALL:AAM40979 (EMBL:AE012270) (468 aa) fasta scores: E(): 8.4e-89, 53.72% id in 456 aa, and to Xanthomonas axonopodis MFS transporter xac1705 SWALL:AAM36572 (EMBL:AE011802) (474 aa) fasta scores: E(): 6.4e-87, 52.57% id in 466 aa; major facilitator transporter complement(2916019..2917482) Burkholderia pseudomallei K96243 3095838 YP_112157.1 CDS BPSS2156 NC_006351.1 2917573 2918580 R Similar to Streptomyces coelicolor hypothetical protein sco6307 sco6307 or scif3.09C SWALL:Q93RT4 (EMBL:AL939127) (320 aa) fasta scores: E(): 2.6e-12, 36.18% id in 351 aa; hypothetical protein complement(2917573..2918580) Burkholderia pseudomallei K96243 3095890 YP_112158.1 CDS BPSS2157 NC_006351.1 2918645 2919922 R Similar to Streptomyces coelicolor hypothetical protein sco2032 or sc3a3.10 SWALL:Q9S2Y3 (EMBL:AL939111) (404 aa) fasta scores: E(): 1.3e-58, 43.32% id in 397 aa, and to Caulobacter crescentus hypothetical protein Cc3562 SWALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 4.4e-54, 38.26% id in 426 aa, and to Ralstonia solanacearum hypothetical protein rsc1197 or rs05729 SWALL:Q8Y047 (EMBL:AL646063) (405 aa) fasta scores: E(): 4.9e-50, 40.9% id in 396 aa. Selfmatch to BPSS2151 fasta scores: E():2.2e-59, 45.3% id in 404 aa.; acyl-CoA transferase complement(2918645..2919922) Burkholderia pseudomallei K96243 3095891 YP_112159.1 CDS BPSS2158 NC_006351.1 2919996 2920745 R Similar to Pseudomonas putida efflux pump regulator SrpS SWALL:Q9R9U0 (EMBL:AF061937) (259 aa) fasta scores: E(): 1.1e-06, 31.81% id in 154 aa, and to Rhodococcus globerulus regulatory protein hppR SWALL:O05148 (EMBL:U89712) (206 aa) fasta scores: E(): 1e-11, 34.61% id in 182 aa, and to Corynebacterium glutamicum transcriptional regulator cgl1314 SWALL:BAB98707 (EMBL:AP005278) (235 aa) fasta scores: E(): 1.4e-10, 28.64% id in 206 aa; IclR family transcriptional regulator complement(2919996..2920745) Burkholderia pseudomallei K96243 3095638 YP_112160.1 CDS BPSS2159 NC_006351.1 2920989 2921894 D Similar to Leuconostoc mesenteroides citrate lyase beta chain CitE SWALL:CILB_LEUMC (SWALL:O53078) (302 aa) fasta scores: E(): 2.9e-19, 30.24% id in 291 aa, and to Rhizobium loti probable similar to beta subunit of citrate lyase msi180 SWALL:CAD31585 (EMBL:AL672113) (304 aa) fasta scores: E(): 3.5e-37, 46.07% id in 280 aa, and to Caulobacter crescentus citrate lyase beta subunit, cc3659 SWALL:Q9A2A7 (EMBL:AE006024) (295 aa) fasta scores: E(): 8.1e-23, 36.82% id in 296 aa; citrate lyase subunit beta 2920989..2921894 Burkholderia pseudomallei K96243 3095537 YP_112161.1 CDS BPSS2160 NC_006351.1 2922210 2923289 D Similar to Burkholderia cepacia major porin protein Opcp1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 3.7e-15, 31.59% id in 383 aa, and to Ralstonia solanacearum outer membrane porin signal peptide protein rsc2855 or rs00250 SWALL:Q8XVH6 (EMBL:AL646072) (389 aa) fasta scores: E(): 7.3e-30, 34.77% id in 394 aa, and to Ralstonia solanacearum porin signal peptide protein rsc2933 or rs00157 SWALL:Q8XV98 (EMBL:AL646072) (379 aa) fasta scores: E(): 4.4e-21, 32.46% id in 345 aa; outer membrane porin protein 2922210..2923289 Burkholderia pseudomallei K96243 3095538 YP_112162.1 CDS BPSS2161 NC_006351.1 2923331 2924806 D Similar to Aeropyrum pernix hypothetical protein Ape2147 SWALL:Q9Y9Z2 (EMBL:AP000063) (479 aa) fasta scores: E(): 1.8e-57, 39.46% id in 446 aa, and to Pyrobaculum aerophilum propionate catabolism protein PrpD pae1717 SWALL:Q8ZWM4 (EMBL:AE009835) (453 aa) fasta scores: E(): 2.4e-50, 36.46% id in 447 aa, and to Corynebacterium glutamicum uncharacterized protein involved in propionate catabolism cgl2538 SWALL:BAB99931 (EMBL:AP005282) (457 aa) fasta scores: E(): 3.2e-39, 31.17% id in 433 aa; MmgE/PrpD family protein 2923331..2924806 Burkholderia pseudomallei K96243 3095940 YP_112163.1 CDS BPSS2162 NC_006351.1 2924882 2926009 R Similar to Bradyrhizobium japonicum Blr1102 protein SWALL:BAC46367 (EMBL:AP005939) (415 aa) fasta scores: E(): 6.4e-18, 28.65% id in 349 aa, and to Rhodobacter sphaeroides quorum sensing OpgC SWALL:Q9FA51 (EMBL:AF016298) (399 aa) fasta scores: E(): 1.1e-16, 29.82% id in 342 aa, and to Rhizobium meliloti hypothetical transmembrane protein smc04381 r03285 or smc04381 SWALL:Q92L11 (EMBL:AL591793) (385 aa) fasta scores: E(): 1.3e-16, 25.38% id in 327 aa; hypothetical protein complement(2924882..2926009) Burkholderia pseudomallei K96243 3095941 YP_112164.1 CDS BPSS2163 NC_006351.1 2926408 2927301 R Similar to Pseudomonas aeruginosa chloramphenicol-sensitive protein RarD or pa3473 SWALL:RARD_PSEAE (SWALL:O68827) (299 aa) fasta scores: E(): 7.6e-52, 54.79% id in 292 aa, and to Haemophilus influenzae hypothetical protein Hi0680 SWALL:Y680_HAEIN (SWALL:Q57389) (298 aa) fasta scores: E(): 3.4e-31, 39% id in 282 aa, and to Haemophilus influenzae hypothetical protein Hi0223 SWALL:Y223_HAEIN (SWALL:P44579) (300 aa) fasta scores: E(): 2.9e-30, 33.9% id in 292 aa; hypothetical protein complement(2926408..2927301) Burkholderia pseudomallei K96243 3097034 YP_112165.1 CDS BPSS2164 NC_006351.1 2927298 2927594 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(2927298..2927594) Burkholderia pseudomallei K96243 3095820 YP_112166.1 CDS BPSS2165 NC_006351.1 2927755 2928762 D Similar to Zymomonas mobilis HpnA protein SWALL:O34285 (EMBL:AJ001401) (337 aa) fasta scores: E(): 1.2e-74, 64.41% id in 326 aa, and to Synechocystis sp. dihydroflavonol-4-reductase slr1706 SWALL:DFRA_SYNY3 (SWALL:P73212) (343 aa) fasta scores: E(): 6.6e-42, 43.11% id in 334 aa; hypothetical protein 2927755..2928762 Burkholderia pseudomallei K96243 3095821 YP_112167.1 CDS BPSS2166 NC_006351.1 2929017 2930585 D N-terminus is similar to the C-terminal region of Frankia sp. CpI1 hypothetical protein SWALL:Q9AEZ8 (EMBL:AY027524) (471 aa) fasta scores: E(): 2.7e-16, 42.3% id in 416 aa. CDS contains alanine rich region, residues 25 to 413; hypothetical protein 2929017..2930585 Burkholderia pseudomallei K96243 3095943 YP_112168.1 CDS BPSS2167 NC_006351.1 2930811 2932001 R Similar to Synechocystis sp. hypothetical protein slr1566 SWALL:P74597 (EMBL:D90916) (395 aa) fasta scores: E(): 2.2e-66, 48.49% id in 398 aa, and to Anabaena sp. hypothetical protein alr0776 SWALL:Q8YYS0 (EMBL:AP003583) (396 aa) fasta scores: E(): 1.2e-55, 49.74% id in 396 aa; glycosyl transferase complement(2930811..2932001) Burkholderia pseudomallei K96243 3095944 YP_112169.1 CDS ispH NC_006351.1 2932395 2933336 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2932395..2933336 Burkholderia pseudomallei K96243 3095062 YP_112170.1 CDS BPSS2169 NC_006351.1 2933349 2934509 D Similar to Anabaena sp. hypothetical protein alr4269 SWALL:Q8YPC9 (EMBL:AP003595) (338 aa) fasta scores: E(): 2.6e-79, 56.17% id in 324 aa, and to Streptomyces coelicolor hypothetical protein SCO6766 or SC6A5.15 SWALL:Q9X7W1 (EMBL:AL939129) (340 aa) fasta scores: E(): 1.1e-73, 50.29% id in 340 aa. CDS is extended at the C-terminus in comparison to orthologues; MoaA/NifB/PqqE family protein 2933349..2934509 Burkholderia pseudomallei K96243 3095559 YP_112171.1 CDS BPSS2170 NC_006351.1 2934853 2935206 D Similar to Anabaena sp. hypothetical protein alr0056 SWALL:Q8Z0N5 (EMBL:AP003581) (120 aa) fasta scores: E(): 1.1e-21, 52.33% id in 107 aa, and to Rhizobium loti hypothetical protein mll2280 SWALL:Q98IR7 (EMBL:AP002999) (137 aa) fasta scores: E(): 2.7e-14, 41.96% id in 112 aa; hypothetical protein 2934853..2935206 Burkholderia pseudomallei K96243 3095750 YP_112172.1 CDS BPSS2171 NC_006351.1 2935765 2937123 D catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate; aminotransferase 2935765..2937123 Burkholderia pseudomallei K96243 3095751 YP_112173.1 CDS BPSS2172 NC_006351.1 2937924 2938391 D hypothetical protein 2937924..2938391 Burkholderia pseudomallei K96243 3095818 YP_112174.1 CDS BPSS2172a NC_006351.1 2938659 2938865 R Similar to Ralstonia solanacearum hypothetical protein RSC0023 SWALL:Q8Y3F7 (EMBL:AL646057) (64 aa) fasta scores: E(): 1.3e-16, 72.13% id in 61 aa, and to Pseudomonas putida hypothetical protein SWALL:Q88E28 (EMBL:AE016791) (65 aa) fasta scores: E(): 9.7e-17, 68.11% id in 69 aa; hypothetical protein complement(2938659..2938865) Burkholderia pseudomallei K96243 3095819 YP_112175.1 CDS cstA NC_006351.1 2938877 2940955 R Similar to Escherichia coli carbon starvation protein A CstA SWALL:CSTA_ECOLI (SWALL:P15078) (701 aa) fasta scores: E(): 1.2e-186, 69.8% id in 702 aa, and to Ralstonia solanacearum probable carbon starvation A transmembrane protein rsc0022 or rs01844 SWALL:Q8Y3F8 (EMBL:AL646057) (686 aa) fasta scores: E(): 1e-208, 79.32% id in 682 aa; carbon starvation protein A complement(2938877..2940955) Burkholderia pseudomallei K96243 3096607 YP_112176.1 CDS BPSS2174 NC_006351.1 2941198 2941707 R Similar to Methylococcus capsulatus cytochrome P460 Cyp SWALL:O87646 (EMBL:AF091435) (161 aa) fasta scores: E(): 8.9e-17, 44.17% id in 163 aa; cytochrome P460 complement(2941198..2941707) Burkholderia pseudomallei K96243 3097237 YP_112177.1 CDS BPSS2175 NC_006351.1 2941725 2942777 R Similar to Rhizobium meliloti epoxide hydrolase rb0209 or smb20216 SWALL:Q92WW8 (EMBL:AL603642) (348 aa) fasta scores: E(): 8.5e-91, 66.76% id in 352 aa, and to Rhizobium loti epoxide hydrolase mlr3288 SWALL:Q98GK2 (EMBL:AP003001) (341 aa) fasta scores: E(): 6.3e-84, 64.24% id in 344 aa; hydrolase complement(2941725..2942777) Burkholderia pseudomallei K96243 3096096 YP_112178.1 CDS BPSS2176 NC_006351.1 2943116 2944624 R Similar to Ralstonia solanacearum hypothetical protein rsp1573 or rs02129 SWALL:Q8XPR5 (EMBL:AL646085) (494 aa) fasta scores: E(): 1.1e-113, 61.69% id in 496 aa, and to Rhizobium loti hypothetical protein mlr6294 SWALL:Q989S9 (EMBL:AP003008) (525 aa) fasta scores: E(): 6e-73, 43.81% id in 493 aa; hypothetical protein complement(2943116..2944624) Burkholderia pseudomallei K96243 3096097 YP_112179.1 CDS BPSS2177 NC_006351.1 2944785 2945741 D Similar to Ralstonia solanacearum probable transcriptional regulator protein rsp1571 or rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 1.5e-43, 40.82% id in 316 aa, and to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 5.9e-14, 26.12% id in 310 aa; LysR family transcriptional regulator 2944785..2945741 Burkholderia pseudomallei K96243 3097125 YP_112180.1 CDS BPSS2178 NC_006351.1 2946195 2946584 R Similar to Ralstonia solanacearum hypothetical protein rsp1249 or rs03193 SWALL:Q8XQH6 (EMBL:AL646083) (127 aa) fasta scores: E(): 1.8e-37, 69.29% id in 127 aa, and to Anabaena sp. hypothetical protein all3014 SWALL:Q8YSS0 (EMBL:AP003591) (120 aa) fasta scores: E(): 4.2e-17, 48.33% id in 120 aa; hypothetical protein complement(2946195..2946584) Burkholderia pseudomallei K96243 3097126 YP_112181.1 CDS BPSS2179 NC_006351.1 2946843 2947295 D hypothetical protein 2946843..2947295 Burkholderia pseudomallei K96243 3096173 YP_112182.1 CDS BPSS2180 NC_006351.1 2947351 2947713 R hypothetical protein complement(2947351..2947713) Burkholderia pseudomallei K96243 3097139 YP_112183.1 CDS BPSS2181 NC_006351.1 2947734 2948480 R Similar to Caulobacter crescentus hypothetical protein cc2891 SWALL:Q9A4E3 (EMBL:AE005953) (241 aa) fasta scores: E(): 8.7e-45, 48.73% id in 238 aa; hypothetical protein complement(2947734..2948480) Burkholderia pseudomallei K96243 3097140 YP_112184.1 CDS BPSS2182 NC_006351.1 2948508 2949569 R Similar to Bacteriophage P22 bactoprenol glucosyl transferase GtrB SWALL:GTRB_BPP22 (SWALL:P57022) (310 aa) fasta scores: E(): 2.1e-62, 54.45% id in 303 aa, and to Bacteriophage SFX bactoprenol glucosyl transferase GtrB SWALL:GTRB_BPSFX (SWALL:Q9T1D6) (305 aa) fasta scores: E(): 3.7e-61, 54.45% id in 303 aa. CDS is extended at the C-terminus in comparison to orthologues; glycosyl transferase complement(2948508..2949569) Burkholderia pseudomallei K96243 3097121 YP_112185.1 CDS BPSS2183 NC_006351.1 2949554 2950978 R Similar to Chlorobium tepidum hypothetical protein ct0439 SWALL:AAM71684 (EMBL:AE012821) (454 aa) fasta scores: E(): 7.1e-38, 35.04% id in 408 aa, and to Chlorobium tepidum hypothetical protein ct0441 SWALL:AAM71686 (EMBL:AE012821) (317 aa) fasta scores: E(): 2.3e-26, 37.3% id in 319 aa. Possible alternative translational start site. CDS is extended at the C-terminus in comparison to some similar proteins; hypothetical protein complement(2949554..2950978) Burkholderia pseudomallei K96243 3097122 YP_112186.1 CDS BPSS2184 NC_006351.1 2950975 2952216 R Similar to Chlorobium tepidum hypothetical protein ct0440 SWALL:AAM71685 (EMBL:AE012821) (406 aa) fasta scores: E(): 9.8e-35, 36.72% id in 403 aa, and to Chlorobium tepidum hypothetical protein ct0439 SWALL:AAM71684 (EMBL:AE012821) (454 aa) fasta scores: E(): 1.9e-34, 36.22% id in 403 aa. Possible alternative translational start site after codon 11; hypothetical protein complement(2950975..2952216) Burkholderia pseudomallei K96243 3096294 YP_112187.1 CDS BPSS2185 NC_006351.1 2953340 2953510 D Similar to Caulobacter crescentus pilus subunit protein PilA or cc2948 SWALL:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 9.7e-08, 54% id in 50 aa, and to Ralstonia solanacearum pilin protein rsp1092 or rs02598 SWALL:Q8XQX6 (EMBL:AL646082) (58 aa) fasta scores: E(): 7.6e-06, 53.33% id in 45 aa. Note: Also similar to BPSS2186 (73 aa) fasta scores: E(): 3.3e-10, 70.213% identity in 47 aa overlap; pilus subunit protein 2953340..2953510 Burkholderia pseudomallei K96243 3097271 YP_112188.1 CDS BPSS2186 NC_006351.1 2953617 2953835 D Similar to Caulobacter crescentus pilus subunit protein PilA or cc2948 SWALL:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 5.1e-05, 51.06% id in 47 aa. Note: Also similar to BPSS2185 (57 aa) fasta scores: E(): 4.7e-09, 70.213% identity in 47 aa overlap. CDS is extended at the N-terminus in comparison to orthologues; pilus subunit protein 2953617..2953835 Burkholderia pseudomallei K96243 3097272 YP_112189.1 CDS BPSS2187 NC_006351.1 2953927 2954466 D Similar to Ralstonia solanacearum probable prepilin peptidase transmembrane protein CpaA1 or rsc0657 or rs01561 SWALL:Q8Y1N3 (EMBL:AL646060) (172 aa) fasta scores: E(): 1.2e-20, 48.21% id in 168 aa, and to Burkholderia pseudomallei type 4 prepilin-like proteins leader peptide processing enzyme SWALL:LEP4_BURPS (SWALL:Q9ZF70) (275 aa) fasta scores: E(): 0.004, 35.5% id in 138 aa; pilus assembly-related outer membrane protein 2953927..2954466 Burkholderia pseudomallei K96243 3096337 YP_112190.1 CDS BPSS2188 NC_006351.1 2954506 2955888 D Similar to Methanopyrus kandleri predicted AAA+ class ATPase with chaperone activity mk0708 SWALL:Q8TXG6 (EMBL:AE010363) (585 aa) fasta scores: E(): 3.4e-25, 33.03% id in 333 aa, and to Methanobacterium thermoautotrophicum conserved protein mth616 SWALL:O26713 (EMBL:AE000843) (442 aa) fasta scores: E(): 6.9e-22, 28.5% id in 407 aa; hypothetical protein 2954506..2955888 Burkholderia pseudomallei K96243 3096338 YP_112191.1 CDS BPSS2189 NC_006351.1 2955934 2956779 D Similar to Ralstonia solanacearum probable pilus assembly transmembrane protein CpaB or rsc0656 or rs01560 SWALL:Q8Y1N4 (EMBL:AL646060) (288 aa) fasta scores: E(): 3.3e-33, 63.23% id in 291 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpC or atu0222 or agr_c_380 SWALL:Q8UIS0 (EMBL:AE008995) (268 aa) fasta scores: E(): 1.2e-09, 30.58% id in 255 aa; pilus assembly-related, exported protein 2955934..2956779 Burkholderia pseudomallei K96243 3096554 YP_112192.1 CDS BPSS2190 NC_006351.1 2956893 2958965 D Similar to Ralstonia solanacearum probable outer membrane channel protein CpaC or rsc0655 or rs01559 SWALL:Q8Y1N5 (EMBL:AL646060) (634 aa) fasta scores: E(): 6.2e-45, 54.45% id in 617 aa, and to Caulobacter crescentus PilQ (pilus assembly protein CpaC) or cc2945 SWALL:Q9L717 (EMBL:AF229646) (560 aa) fasta scores: E(): 1.3e-10, 30.64% id in 558 aa; hypothetical protein 2956893..2958965 Burkholderia pseudomallei K96243 3096073 YP_112193.1 CDS BPSS2191 NC_006351.1 2958987 2959292 D Similar to Ralstonia solanacearum probable lipoprotein rsc0654 or rs01558 SWALL:Q8Y1N6 (EMBL:AL646060) (102 aa) fasta scores: E(): 4.3e-11, 46.59% id in 88 aa; lipoprotein 2958987..2959292 Burkholderia pseudomallei K96243 3096074 YP_112194.1 CDS BPSS2192 NC_006351.1 2959383 2960573 D hypothetical protein 2959383..2960573 Burkholderia pseudomallei K96243 3096421 YP_112195.1 CDS BPSS2193 NC_006351.1 2960597 2961139 D hypothetical protein 2960597..2961139 Burkholderia pseudomallei K96243 3096422 YP_112196.1 CDS BPSS2194 NC_006351.1 2961136 2961597 D hypothetical protein 2961136..2961597 Burkholderia pseudomallei K96243 3096437 YP_112197.1 CDS BPSS2195 NC_006351.1 2961620 2962828 D Similar to Ralstonia solanacearum pilus assembly protein CpaE1 or rsc0653 or rs01557 SWALL:Q8Y1N7 (EMBL:AL646060) (397 aa) fasta scores: E(): 1.8e-49, 39.59% id in 394 aa, and to Caulobacter crescentus CpaE SWALL:Q9L715 (EMBL:AF229646) (517 aa) fasta scores: E(): 6.4e-14, 29.53% id in 369 aa; pilus assembly-related protein 2961620..2962828 Burkholderia pseudomallei K96243 3096666 YP_112198.1 CDS BPSS2196 NC_006351.1 2962850 2964217 D Similar to Chlorobium tepidum type II secretion system protein ct0434 SWALL:AAM71680 (EMBL:AE012821) (480 aa) fasta scores: E(): 1.1e-92, 60.33% id in 416 aa, and to Agrobacterium tumefaciens component of type IV pilus CtpG or atu0218 or agr_c_373 SWALL:Q8UIS4 (EMBL:AE008995) (491 aa) fasta scores: E(): 4e-73, 48.49% id in 431 aa; type II/IV secretion system-related protein 2962850..2964217 Burkholderia pseudomallei K96243 3096667 YP_112199.1 CDS BPSS2197 NC_006351.1 2964244 2965221 D Similar to Ralstonia solanacearum tight adherence TadB-related transmembrane protein rsc0651 or rs01555 SWALL:Q8Y1N9 (EMBL:AL646060) (325 aa) fasta scores: E(): 6.1e-57, 46.34% id in 328 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpH or atu0217 or agr_c_372 SWALL:Q8UIS5 (EMBL:AE008995) (334 aa) fasta scores: E(): 1.9e-21, 28.35% id in 335 aa; hypothetical protein 2964244..2965221 Burkholderia pseudomallei K96243 3095763 YP_112200.1 CDS BPSS2198 NC_006351.1 2965276 2966235 D Similar to Ralstonia solanacearum tight adherence TadC-related transmembrane protein rsc0650 or rs01554 SWALL:Q8Y1P0 (EMBL:AL646060) (315 aa) fasta scores: E(): 2.5e-53, 50.48% id in 311 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpI or atu0216 or agr_c_371 SWALL:Q8UIS6 (EMBL:AE008995) (328 aa) fasta scores: E(): 4.2e-23, 31.56% id in 320 aa; hypothetical protein 2965276..2966235 Burkholderia pseudomallei K96243 3095764 YP_112201.1 CDS BPSS2199 NC_006351.1 2966659 2967135 R Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2082 SWALL:Q9I233 (EMBL:AE004636) (158 aa) fasta scores: E(): 3.2e-34, 56.12% id in 155 aa, and to Bacillus subtilis transcriptional regulator AzlB SWALL:AZLB_BACSU (SWALL:O07920) (157 aa) fasta scores: E(): 2.2e-15, 34.45% id in 148 aa. Note: Also similar to BPSL0849 (168 aa) fasta scores: E(): 3.2e-29, 52.500% identity in 160 aa overlap; transcription regulator AsnC complement(2966659..2967135) Burkholderia pseudomallei K96243 3096567 YP_112202.1 CDS tyrB2 NC_006351.1 2967370 2968587 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2967370..2968587 Burkholderia pseudomallei K96243 3096804 YP_112203.1 CDS BPSS2201 NC_006351.1 2968811 2969203 D Similar to Rhizobium meliloti translation initiation inhibitor protein rb0363 or smb20377 SWALL:Q92WH6 (EMBL:AL603643) (127 aa) fasta scores: E(): 1.1e-11, 40.32% id in 124 aa, to Xanthomonas axonopodis translation initiation inhibitor xac3392 SWALL:AAM38235 (EMBL:AE011985) (126 aa) fasta scores: E(): 4.9e-08, 36.03% id in 111 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri TdcF protein or b3113 or c3871 or sf3153 SWALL:TDCF_ECOLI (SWALL:P42631) (129 aa) fasta scores: E(): 7.8e-06, 33.91% id in 115 aa; hypothetical protein 2968811..2969203 Burkholderia pseudomallei K96243 3096574 YP_112204.1 CDS BPSS2202 NC_006351.1 2969371 2970444 D Similar to Ralstonia solanacearum probable porin signal peptide protein rsc2108 or rs01496 SWALL:Q8XXK5 (EMBL:AL646068) (381 aa) fasta scores: E(): 2.3e-16, 31.94% id in 385 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 8.5e-11, 30.78% id in 393 aa; porin related, membrane protein 2969371..2970444 Burkholderia pseudomallei K96243 3096575 YP_112205.1 CDS BPSS2203 NC_006351.1 2970524 2971954 D Similar to Bacillus subtilis amino-acid permease RocC or ipa-78D SWALL:ROCC_BACSU (SWALL:P39636) (470 aa) fasta scores: E(): 2.4e-57, 37.3% id in 453 aa, and to Escherichia coli probable S-methylmethionine permease MmuP or b0260 SWALL:MMUP_ECOLI (SWALL:Q47689) (467 aa) fasta scores: E(): 8.4e-57, 37.69% id in 451 aa; amino acid transport, membrane protein 2970524..2971954 Burkholderia pseudomallei K96243 3096698 YP_112206.1 CDS BPSS2204 NC_006351.1 2972031 2972798 R Similar to Rhizobium meliloti transcriptional regulator, GntR family protein rb1031 or smb21591 SWALL:Q92UR2 (EMBL:AL603645) (244 aa) fasta scores: E(): 5.6e-15, 34.66% id in 225 aa, and to Escherichia coli galactonate operon transcriptional repressor DgoR or b3694/b3695 SWALL:DGOR_ECOLI (SWALL:P31460) (229 aa) fasta scores: E(): 2.2e-07, 25.11% id in 219 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; GntR family transcriptional regulator complement(2972031..2972798) Burkholderia pseudomallei K96243 3096699 YP_112207.1 CDS BPSS2205 NC_006351.1 2973292 2974830 R Similar to Ralstonia solanacearum hypothetical protein rsp1573 or rs02129 SWALL:Q8XPR5 (EMBL:AL646085) (494 aa) fasta scores: E(): 1.5e-114, 60.8% id in 495 aa, and to Brucella melitensis hypothetical cytosolic protein bmeii0539 SWALL:Q8YCI9 (EMBL:AE009689) (489 aa) fasta scores: E(): 1.9e-34, 30.2% id in 500 aa; hypothetical protein complement(2973292..2974830) Burkholderia pseudomallei K96243 3096863 YP_112208.1 CDS BPSS2206 NC_006351.1 2974827 2976134 R Similar to the plasmid-borne Agrobacterium vitis tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 3.9e-69, 43.63% id in 424 aa, and to Pseudomonas putida phthalate transporter Pht1 SWALL:PHT1_PSEPU (SWALL:Q05181) (451 aa) fasta scores: E(): 1.5e-62, 41.45% id in 427 aa; transport related, membrane protein complement(2974827..2976134) Burkholderia pseudomallei K96243 3096733 YP_112209.1 CDS BPSS2207 NC_006351.1 2976263 2977177 D Similar to Ralstonia solanacearum probable transcriptional regulator protein rsp1571 or rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 4e-38, 37.17% id in 304 aa, and to Pseudomonas sp. transcriptional regulator ORF99 SWALL:Q936X4 (EMBL:U66917) (322 aa) fasta scores: E(): 4.8e-19, 34.25% id in 289 aa; LysR family transcriptional regulator 2976263..2977177 Burkholderia pseudomallei K96243 3096734 YP_112210.1 CDS BPSS2208 NC_006351.1 2977466 2979592 R hypothetical protein complement(2977466..2979592) Burkholderia pseudomallei K96243 3096868 YP_112211.1 CDS BPSS2209 NC_006351.1 2980527 2980904 D hypothetical protein 2980527..2980904 Burkholderia pseudomallei K96243 3096869 YP_112212.1 CDS BPSS2210 NC_006351.1 2980951 2982270 D Similar to Pseudomonas aeruginosa probable transporter pa2135 SWALL:Q9I1Y0 (EMBL:AE004641) (454 aa) fasta scores: E(): 1.6e-32, 39.95% id in 463 aa, and to Methanosarcina mazei Na(+)/H(+) antiporter mm1891 SWALL:AAM31587 (EMBL:AE013425) (437 aa) fasta scores: E(): 5.1e-05, 29.97% id in 447 aa, and to Escherichia coli Na(+)/H(+) exchanger YjcE or b4065 SWALL:YJCE_ECOLI (SWALL:P32703) (549 aa) fasta scores: E(): 0.00014, 29.67% id in 273 aa; cation transport-like protein 2980951..2982270 Burkholderia pseudomallei K96243 3096483 YP_112213.1 CDS BPSS2211 NC_006351.1 2982849 2986328 R Similar to Pseudomonas aeruginosa probable ATP-dependent DNA ligase pa2138 SWALL:Q9I1X7 (EMBL:AE004641) (840 aa) fasta scores: E(): 3.9e-54, 42.03% id in 1123 aa, and to Xanthomonas campestris ATP-dependent DNA ligase xcc0105 SWALL:Q8PE76 (EMBL:AE012104) (1001 aa) fasta scores: E(): 4.3e-34, 35.13% id in 1147 aa. Note: There are some fragments in this CDS that present no similarities to any of the database matches; ATP-dependent DNA ligase complement(2982849..2986328) Burkholderia pseudomallei K96243 3096301 YP_112214.1 CDS BPSS2212 NC_006351.1 2986398 2987504 R Similar to Pseudomonas aeruginosa hypothetical protein pa2150 SWALL:Q9I1W5 (EMBL:AE004642) (293 aa) fasta scores: E(): 1.6e-40, 48.67% id in 302 aa, and to Xanthomonas campestris hypothetical protein xcc0104 SWALL:AAM39423 (EMBL:AE012104) (313 aa) fasta scores: E(): 3.3e-29, 39.2% id in 278 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein complement(2986398..2987504) Burkholderia pseudomallei K96243 3096302 YP_112215.1 CDS BPSS2213 NC_006351.1 2987586 2988089 R Similar to Rhizobium meliloti hypothetical membrane-anchored protein rb0938 or smb21362 SWALL:Q92UZ6 (EMBL:AL603645) (146 aa) fasta scores: E(): 1.4e-07, 30.07% id in 143 aa, and to Bacillus halodurans hypothetical protein bh1232 SWALL:Q9KDI1 (EMBL:AP001511) (218 aa) fasta scores: E(): 1.4e-07, 29.73% id in 148 aa; hypothetical protein complement(2987586..2988089) Burkholderia pseudomallei K96243 3096538 YP_112216.1 CDS katE NC_006351.1 2988112 2990238 R Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II complement(2988112..2990238) Burkholderia pseudomallei K96243 3095084 YP_112217.1 CDS BPSS2215 NC_006351.1 2990374 2990805 R hypothetical protein complement(2990374..2990805) Burkholderia pseudomallei K96243 3096539 YP_112218.1 CDS BPSS2216 NC_006351.1 2990840 2991049 R Similar to Ralstonia solanacearum probable transmembrane protein RS02225 SWALL:Q8XPH4 (EMBL:AL646086) (72 aa) fasta scores: E(): 2.1e-11, 74.13% id in 58 aa, and to Bordetella pertussis membrane protein SWALL:Q7VXL6 (EMBL:BX640416) (53 aa) fasta scores: E(): 4.3e-10, 69.81% id in 53 aa. Possible alternative translational start site after codon 16; hypothetical protein complement(2990840..2991049) Burkholderia pseudomallei K96243 3096712 YP_112219.1 CDS BPSS2217 NC_006351.1 2991046 2991234 R Similar to Rhizobium loti hypothetical protein msr0042 SWALL:Q98NP7 (EMBL:AP002994) (62 aa) fasta scores: E(): 5.3e-11, 68.85% id in 61 aa, and to Brucella melitensis hypothetical cytosolic protein bmei1136 SWALL:Q8YGM2 (EMBL:AE009553) (65 aa) fasta scores: E(): 2.7e-10, 68.33% id in 60 aa; hypothetical protein complement(2991046..2991234) Burkholderia pseudomallei K96243 3095938 YP_112220.1 CDS rpoN NC_006351.1 2991302 2992777 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(2991302..2992777) Burkholderia pseudomallei K96243 3095887 YP_112221.1 CDS BPSS2219 NC_006351.1 2993473 2994231 D lipoprotein 2993473..2994231 Burkholderia pseudomallei K96243 3095939 YP_112222.1 CDS BPSS2220 NC_006351.1 2994290 2995033 D Similar to Pseudomonas aeruginosa hypothetical protein pa2185 SWALL:Q9I1T0 (EMBL:AE004645) (294 aa) fasta scores: E(): 3.2e-48, 56.31% id in 293 aa, and to Salmonella typhi hypothetical protein sty1320 SWALL:Q8Z7E1 (EMBL:AL627269) (292 aa) fasta scores: E(): 4e-46, 53.4% id in 294 aa. Note: This CDS seems to lack a fragment of approx 50 residues at residue 37; hypothetical protein 2994290..2995033 Burkholderia pseudomallei K96243 3096040 YP_112223.1 CDS BPSS2221 NC_006351.1 2995345 2995854 R Similar to Pseudomonas aeruginosa hypothetical protein pa2184 SWALL:Q9I1T1 (EMBL:AE004645) (169 aa) fasta scores: E(): 2.5e-34, 59.76% id in 169 aa, and to Escherichia coli protein YciE or b1257 SWALL:YCIE_ECOLI (SWALL:P21363) (168 aa) fasta scores: E(): 4.7e-25, 49.39% id in 164 aa; hypothetical protein complement(2995345..2995854) Burkholderia pseudomallei K96243 3096041 YP_112224.1 CDS BPSS2222 NC_006351.1 2996319 2996996 R C-terminal region is similar to Ralstonia solanacearum hypothetical protein ssp0486 or rs00364 SWALL:Q8XSI8 (EMBL:AL646078) (148 aa) fasta scores: E(): 7.6e-11, 42.3% id in 130 aa; hypothetical protein complement(2996319..2996996) Burkholderia pseudomallei K96243 3096769 YP_112225.1 CDS BPSS2223 NC_006351.1 2997308 2998165 R Similar to Agrobacterium tumefaciens agr_c_1796 SWALL:Q8U5G0 (EMBL:AE008028) (286 aa) fasta scores: E(): 4.9e-20, 29.56% id in 274 aa, and to Rhizobium loti hypothetical protein mlr1332 SWALL:Q98KT3 (EMBL:AP002997) (289 aa) fasta scores: E(): 4.7e-18, 29.83% id in 238 aa; hypothetical protein complement(2997308..2998165) Burkholderia pseudomallei K96243 3095997 YP_112226.1 CDS BPSS2224 NC_006351.1 2998583 2998879 R lipoprotein complement(2998583..2998879) Burkholderia pseudomallei K96243 3095998 YP_112227.1 CDS BPSS2225 NC_006351.1 2998916 2999272 R hypothetical protein complement(2998916..2999272) Burkholderia pseudomallei K96243 3096730 YP_112228.1 CDS BPSS2226 NC_006351.1 3001052 3001351 R hypothetical protein complement(3001052..3001351) Burkholderia pseudomallei K96243 3096731 YP_112229.1 CDS BPSS2227 NC_006351.1 3001644 3001892 D Similar to the C-terminal region of Ralstonia solanacearum hypothetical protein rsp1523 or rs04800 SWALL:Q8XPW3 (EMBL:AL646085) (91 aa) fasta scores: E(): 0.5, 37.87% id in 66 aa, and of Mycobacterium tuberculosis hypothetical protein mt3313 SWALL:Q8VJ47 (EMBL:AE007143) (150 aa) fasta scores: E(): 3.2, 29.41% id in 68 aa. Similar to Rhizobium loti hypothetical protein Msl3106 msl3106 SWALL:Q98GZ3 (EMBL:AP003001) (86 aa) fasta scores: E(): 3.4, 32.85% id in 70 aa. Possible gene remanat; hypothetical protein 3001644..3001892 Burkholderia pseudomallei K96243 3096784 YP_112230.1 CDS BPSS2227A NC_006351.1 3002044 3002223 D N-terminus is weakly similar to the C-terminal region of Rhizobium loti hypothetical protein msl3425 SWALL:Q98GA0 (EMBL:AP003002) (51 aa) fasta scores: E(): 0.37, 36.95% id in 46 aa; hypothetical protein 3002044..3002223 Burkholderia pseudomallei K96243 3096561 YP_112231.1 CDS BPSS2228 NC_006351.1 3002627 3003271 R hypothetical protein complement(3002627..3003271) Burkholderia pseudomallei K96243 3096562 YP_112232.1 CDS BPSS2229 NC_006351.1 3003879 3004310 D Similar to Pseudomonas aeruginosa hypothetical protein pa2159 SWALL:Q9I1V6 (EMBL:AE004642) (138 aa) fasta scores: E(): 1.5e-21, 50.36% id in 137 aa, and to Bacillus halodurans hypothetical protein bh2605 SWALL:Q9K9P0 (EMBL:AP001516) (142 aa) fasta scores: E(): 1.2e-14, 37.85% id in 140 aa; hypothetical protein 3003879..3004310 Burkholderia pseudomallei K96243 3096589 YP_112233.1 CDS BPSS2230 NC_006351.1 3004456 3004947 D Similar to Methanosarcina mazei hypothetical protein mm1793 SWALL:AAM31489 (EMBL:AE013416) (135 aa) fasta scores: E(): 1.3e-21, 49.6% id in 125 aa, and to Agrobacterium tumefaciens agr_c_723 SWALL:Q8U5M3 (EMBL:AE007978) (142 aa) fasta scores: E(): 1.3e-12, 40.17% id in 117 aa; hypothetical protein 3004456..3004947 Burkholderia pseudomallei K96243 3096590 YP_112234.1 CDS BPSS2231 NC_006351.1 3005164 3005613 R Partially similar to Brucella suis polar differentiation response regulator DivK or bra0612 SWALL:AAN33801 (EMBL:AE014558) (123 aa) fasta scores: E(): 1.8e-07, 27.58% id in 116 aa, and to Streptomyces coelicolor regulatory protein sco5351 or scbac5h2.20 SWALL:Q9ADB7 (EMBL:AL939123) (167 aa) fasta scores: E(): 3.7e-07, 36.36% id in 110 aa; response regulator complement(3005164..3005613) Burkholderia pseudomallei K96243 3096777 YP_112235.1 CDS BPSS2232 NC_006351.1 3005722 3006078 D hypothetical protein 3005722..3006078 Burkholderia pseudomallei K96243 3096825 YP_112236.1 CDS BPSS2233 NC_006351.1 3006090 3006746 D Similar to Rhizobium loti hypothetical protein mll5147 SWALL:Q98CH6 (EMBL:AP003005) (223 aa) fasta scores: E(): 1.1e-28, 47.34% id in 188 aa, and to Zymomonas mobilis hypothetical protein SWALL:Q9RNL0 (EMBL:AF180145) (206 aa) fasta scores: E(): 6e-28, 43.14% id in 197 aa; DNA glycosylase 3006090..3006746 Burkholderia pseudomallei K96243 3096826 YP_112237.1 CDS BPSS2234 NC_006351.1 3006825 3008279 D Similar to Bradyrhizobium japonicum Blr6117 protein SWALL:BAC51382 (EMBL:AP005957) (450 aa) fasta scores: E(): 4.1e-64, 47.4% id in 405 aa, and to Ralstonia solanacearum probable manganese transport protein MntH or rsp0520 or rs00399 SWALL:MNTH_RALSO (SWALL:Q8XSF6) (442 aa) fasta scores: E(): 1.1e-11, 27.19% id in 445 aa; transport related, membrane protein 3006825..3008279 Burkholderia pseudomallei K96243 3096809 YP_112238.1 CDS BPSS2235 NC_006351.1 3008389 3009564 R Similar to Methylobacter marinus glutathione-dependent formaldehyde dehydrogenase Fdh SWALL:FADH_METMR (SWALL:P47734) (424 aa) fasta scores: E(): 1.8e-78, 53.07% id in 390 aa, and to Pseudomonas putida glutathione-independent formaldehyde dehydrogenase FdhA SWALL:FADH_PSEPU (SWALL:P46154) (398 aa) fasta scores: E(): 4.7e-20, 32.5% id in 403 aa; Zinc-binding dehydrogenase complement(3008389..3009564) Burkholderia pseudomallei K96243 3096810 YP_112239.1 CDS BPSS2236 NC_006351.1 3010008 3010649 R hypothetical protein complement(3010008..3010649) Burkholderia pseudomallei K96243 3096474 YP_112240.1 CDS BPSS2237 NC_006351.1 3010737 3011342 R Similar to Pseudomonas aeruginosa hypothetical protein pa2134 SWALL:Q9I1Y1 (EMBL:AE004641) (190 aa) fasta scores: E(): 3.5e-13, 44% id in 150 aa; hypothetical protein complement(3010737..3011342) Burkholderia pseudomallei K96243 3096844 YP_112241.1 CDS BPSS2238 NC_006351.1 3011380 3012237 R Similar to Anabaena sp. oxidoreductase alr5182 SWALL:Q8YLW4 (EMBL:AP003599) (285 aa) fasta scores: E(): 3.4e-62, 60.28% id in 277 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa2142 SWALL:Q9I1X3 (EMBL:AE004641) (286 aa) fasta scores: E(): 3.5e-58, 57.34% id in 286 aa; short-chain dehydrogenase complement(3011380..3012237) Burkholderia pseudomallei K96243 3096845 YP_112242.1 CDS BPSS2239 NC_006351.1 3012448 3013014 R hypothetical protein complement(3012448..3013014) Burkholderia pseudomallei K96243 3096680 YP_112243.1 CDS BPSS2240 NC_006351.1 3013274 3013585 R C-terminal region similar to Anabaena sp. hypothetical protein Asl3383 asl3383 SWALL:Q8YRR0 (EMBL:AP003592) (65 aa) fasta scores: E(): 2.8e-06, 46.66% id in 60 aa, and to Methanosarcina mazei hypothetical protein mm0228 SWALL:AAM29924 (EMBL:AE013247) (62 aa) fasta scores: E(): 4.5e-05, 44.06% id in 59 aa; hypothetical protein complement(3013274..3013585) Burkholderia pseudomallei K96243 3096681 YP_112244.1 CDS BPSS2241 NC_006351.1 3013740 3013949 R hypothetical protein complement(3013740..3013949) Burkholderia pseudomallei K96243 3096838 YP_112245.1 CDS BPSS2242 NC_006351.1 3013956 3014771 R Similar to Xanthomonas campestris glucose 1-dehydrogenase homolog YxnA or xcc1992 SWALL:AAM41281 (EMBL:AE012304) (292 aa) fasta scores: E(): 6.3e-44, 51.15% id in 260 aa, and to Actinosynnema pretiosum glucose 1-dehydrogenase asm27 SWALL:AAM54105 (EMBL:AF453501) (341 aa) fasta scores: E(): 1e-33, 43.51% id in 262 aa, and to Bacillus subtilis hypothetical oxidoreductase YqjQ SWALL:YQJQ_BACSU (SWALL:P54554) (259 aa) fasta scores: E(): 4.7e-16, 31.43% id in 264 aa; short chain dehydrogenase complement(3013956..3014771) Burkholderia pseudomallei K96243 3096572 YP_112246.1 CDS BPSS2243 NC_006351.1 3014799 3015290 R lipoprotein complement(3014799..3015290) Burkholderia pseudomallei K96243 3096573 YP_112247.1 CDS BPSS2244 NC_006351.1 3015521 3016909 D Similar to Nostoc punctiforme sucrose-phosphate synthase SpsA SWALL:Q937E5 (EMBL:AJ316587) (423 aa) fasta scores: E(): 1.1e-44, 36.34% id in 421 aa, and to Mycobacterium tuberculosis hypothetical protein rv0486 or mt0504 or mtcy20g9.12 SWALL:Y486_MYCTU (SWALL:Q11152) (480 aa) fasta scores: E(): 8.9e-24, 36.23% id in 425 aa; transferase 3015521..3016909 Burkholderia pseudomallei K96243 3096716 YP_112248.1 CDS BPSS2245 NC_006351.1 3016906 3017952 D Similar to Pseudomonas aeruginosa similar to NAD dependent epimerase/dehydratase SWALL:AAM27842 (EMBL:AF498418) (318 aa) fasta scores: E(): 1.4e-87, 69.5% id in 305 aa, and to Synechocystis sp. dTDP-glucose 4-6-dehydratase RfbB or slr0809 SWALL:P74036 (EMBL:D90911) (328 aa) fasta scores: E(): 1.6e-73, 61.09% id in 311 aa; epimerase 3016906..3017952 Burkholderia pseudomallei K96243 3096717 YP_112249.1 CDS BPSS2246 NC_006351.1 3018081 3020396 R Similar to Anabaena sp. two-component hybrid sensor and regulator alr3442 SWALL:Q8YRK4 (EMBL:AP003593) (865 aa) fasta scores: E(): 1.3e-49, 30.58% id in 680 aa, and to Ralstonia solanacearum probable composite two-component regulatory rsp1676 or rs02235 SWALL:Q8XPG5 (EMBL:AL646086) (796 aa) fasta scores: E(): 1e-42, 32.65% id in 640 aa; sensor kinase/response regulator fusion protein complement(3018081..3020396) Burkholderia pseudomallei K96243 3095951 YP_112250.1 CDS BPSS2247 NC_006351.1 3020531 3021223 D hypothetical protein 3020531..3021223 Burkholderia pseudomallei K96243 3096427 YP_112251.1 CDS BPSS2248 NC_006351.1 3021241 3022149 D Similar to Streptomyces coelicolor transferase sco6190 or sc2g5.11 SWALL:Q9Z5B2 (EMBL:AL939126) (298 aa) fasta scores: E(): 9.1e-54, 51.56% id in 287 aa, and to Clostridium acetobutylicum predicted glycosyltransferase cac2171 SWALL:Q97H42 (EMBL:AE007717) (299 aa) fasta scores: E(): 8.4e-09, 24.26% id in 239 aa; transferase 3021241..3022149 Burkholderia pseudomallei K96243 3096428 YP_112252.1 CDS BPSS2249 NC_006351.1 3022173 3023543 R Similar to Ralstonia solanacearum probable sigma-54 interacting response regulator transcription regulator protein rsp1667 or rs02226 SWALL:Q8XPH3 (EMBL:AL646086) (491 aa) fasta scores: E(): 2.6e-102, 62.63% id in 455 aa, and to Escherichia coli acetoacetate metabolism regulatory protein AtoC or Az or b2220 SWALL:ATOC_ECOLI (SWALL:Q06065) (461 aa) fasta scores: E(): 7.5e-55, 39.52% id in 458 aa. Note: Also similar in its C-terminal region to the upstream CDS BPSS2250 (323 aa) fasta scores: E(): 7.7e-44, 47.352% identity in 321 aa overlap; Fis family transcriptional regulator complement(3022173..3023543) Burkholderia pseudomallei K96243 3095235 YP_112253.1 CDS BPSS2250 NC_006351.1 3023932 3024900 D Similar to Ralstonia solanacearum probable sigma-54 interacting transcription regulator protein rsp1668 or rs02227 SWALL:Q8XPH2 (EMBL:AL646086) (384 aa) fasta scores: E(): 2.7e-56, 52.59% id in 308 aa, and to Zymomonas mobilis nitrogen assimilation regulatory protein ntrC SWALL:Q9RNP2 (EMBL:AF179611) (372 aa) fasta scores: E(): 8.3e-41, 52.08% id in 240 aa. Note: Also similar to the C-terminal region of BPSS2249 (468 aa) fasta scores: E(): 1e-48, 47.664% identity in 321 aa overlap; Fis family transcriptional regulator 3023932..3024900 Burkholderia pseudomallei K96243 3095236 YP_112254.1 CDS BPSS2251 NC_006351.1 3025134 3026084 R Similar to Streptomyces coelicolor transferase sco6184 or sc2g5.05 SWALL:Q9Z5B8 (EMBL:AL939126) (316 aa) fasta scores: E(): 5.4e-22, 39.81% id in 324 aa, and low similarity to Halobacterium sp. LPS glycosyltransferase Lpg or vng0060G SWALL:Q9HSV4 (EMBL:AE004975) (333 aa) fasta scores: E(): 1.7e-06, 24.19% id in 248 aa; LPS biosynthesis related transferase complement(3025134..3026084) Burkholderia pseudomallei K96243 3096987 YP_112255.1 CDS BPSS2252 NC_006351.1 3026074 3027189 R Similar to Rhizobium loti ADP-heptose-LPS heptosyltransferase mlr2566 SWALL:Q98I51 (EMBL:AP003000) (335 aa) fasta scores: E(): 4e-13, 28.53% id in 347 aa, and to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF or WaaF or b3620 SWALL:RFAF_ECOLI (SWALL:P37692) (348 aa) fasta scores: E(): 3.1e-08, 27.21% id in 305 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; LPS biosynthesis related glycosyltransferase complement(3026074..3027189) Burkholderia pseudomallei K96243 3096610 YP_112256.1 CDS BPSS2253 NC_006351.1 3027186 3028187 R Similar to Streptomyces coelicolor transferase sco6181 or sc2g5.02 SWALL:Q9Z5C1 (EMBL:AL939126) (344 aa) fasta scores: E(): 2e-31, 40.41% id in 334 aa, and to Methanosarcina mazei glycosyltransferase mm2102 SWALL:AAM31798 (EMBL:AE013451) (327 aa) fasta scores: E(): 1.1e-10, 26.84% id in 231 aa; glycosyltransferase complement(3027186..3028187) Burkholderia pseudomallei K96243 3096611 YP_112257.1 CDS BPSS2254 NC_006351.1 3028184 3029938 R Similar to Rhizobium sp. nodulation protein NolO or y4hD SWALL:NOLO_RHISN (SWALL:P55474) (680 aa) fasta scores: E(): 3.9e-56, 39.72% id in 584 aa, and to Methanopyrus kandleri predicted carbamoyl transferase, NodU family mk0097 SWALL:Q8TZ42 (EMBL:AE010309) (515 aa) fasta scores: E(): 1.8e-44, 33.08% id in 526 aa. Note: This CDS is shorter in its C-terminal region than most of its database matches; carbamoyltransferase complement(3028184..3029938) Burkholderia pseudomallei K96243 3095322 YP_112258.1 CDS BPSS2255 NC_006351.1 3029942 3031801 R Poor database matches. C-terminal region is weakly similar to Streptomyces coelicolor transferase SCO6183 or SC2G5.04 SWALL:Q9Z5B9 (EMBL:AL939126) (335 aa) fasta scores: E(): 3.2e-10, 29.08% id in 471 aa; glycosyl transferase complement(3029942..3031801) Burkholderia pseudomallei K96243 3095323 YP_112259.1 CDS BPSS2256 NC_006351.1 3031798 3032433 R Similar to Yersinia pestis hypothetical protein ypo1074 SWALL:Q8ZH37 (EMBL:AJ414146) (188 aa) fasta scores: E(): 4.2e-15, 32.75% id in 174 aa, and to Escherichia coli and Shigella flexneri hypothetical protein YaeD SWALL:YAED_ECOLI (SWALL:P31546) (191 aa) fasta scores: E(): 1.2e-14, 35.03% id in 157 aa. CDS is extended at the C-terminus in comparison to some orthologues; haloacid dehalogenase complement(3031798..3032433) Burkholderia pseudomallei K96243 3097172 YP_112260.1 CDS BPSS2257 NC_006351.1 3032424 3033179 R Similar to Methanosarcina acetivorans 3-oxoacyl-[acyl-carrier protein] reductase ma2686 SWALL:Q8TMH4 (EMBL:AE010965) (239 aa) fasta scores: E(): 7.2e-19, 33.61% id in 238 aa. N-terminus is similar to the N-terminal region of to Pseudomonas paucimobilis 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX SWALL:LINX_PSEPA (SWALL:P50198) (250 aa) fasta scores: E(): 8.3e-16, 34.46% id in 206 aa; short chain dehydrogenase complement(3032424..3033179) Burkholderia pseudomallei K96243 3097173 YP_112261.1 CDS BPSS2258 NC_006351.1 3033392 3033886 R hypothetical protein complement(3033392..3033886) Burkholderia pseudomallei K96243 3095497 YP_112262.1 CDS BPSS2259 NC_006351.1 3033861 3036827 R No significant database matches to the full length CDS. N-terminal region is similar to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc0478 or rs04417 SWALL:Q8Y258 (EMBL:AL646059) (592 aa) fasta scores: E(): 3.2e-84, 50.42% id in 591 aa, and to Yersinia pestis ABC transport protein ypo2588 SWALL:Q8ZDI0 (EMBL:AJ414152) (631 aa) fasta scores: E(): 6.9e-74, 47.04% id in 576 aa. C-terminal region is Similar to Ralstonia solanacearum probable composite two-component regulatory rsp1676 or rs02235 SWALL:Q8XPG5 (EMBL:AL646086) (796 aa) fasta scores: E(): 3.9e-09, 28.02% id in 339 aa. Similar to BPSL0655, 51.007% identity (53.427% ungapped) in 596 aa overlap; fusion protein, ATP-binding transmembrane ABC transporter and regulatory protein complement(3033861..3036827) Burkholderia pseudomallei K96243 3095173 YP_112263.1 CDS BPSS2260 NC_006351.1 3036925 3037992 R Poor database matches. Weakly similar to an internal region of Deinococcus radiodurans hypothetical protein dr0392 SWALL:Q9RXC3 (EMBL:AE001899) (465 aa) fasta scores: E(): 7.2e-09, 28.05% id in 385 aa; hypothetical protein complement(3036925..3037992) Burkholderia pseudomallei K96243 3095174 YP_112264.1 CDS BPSS2261 NC_006351.1 3038859 3040160 R No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Schizosaccharomyces pombe phosphatidylserine decarboxylase proenzyme 2 precursor SPAC31G5.15 SWALL:O14111 (EMBL:Z98979) (980 aa) fasta scores: E(): 4.9e-09, 33.33% id in 204 aa; phosphatidylserine decarboxylase complement(3038859..3040160) Burkholderia pseudomallei K96243 3096568 YP_112265.1 CDS sdhB NC_006351.1 3040322 3041029 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(3040322..3041029) Burkholderia pseudomallei K96243 3095755 YP_112266.1 CDS BPSS2263 NC_006351.1 3041112 3041357 R Poor database matches. C-terminal region is weakly similar to Ralstonia solanacearum hypothetical protein rsp0643 or rs05579 SWALL:Q8XS38 (EMBL:AL646080) (103 aa) fasta scores: E(): 2.3, 29.73% id in 74 aa; hypothetical protein complement(3041112..3041357) Burkholderia pseudomallei K96243 3096569 YP_112267.1 CDS BPSS2264 NC_006351.1 3041653 3042540 R Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR or GlxB1 SWALL:GLXR_ECOLI (SWALL:P77161) (292 aa) fasta scores: E(): 6.2e-18, 30.42% id in 286 aa, and to Helicobacter pylori J99 3-hydroxyacid dehydrogenase jhp0585 SWALL:Q9ZLJ4 (EMBL:AE001491) (285 aa) fasta scores: E(): 2.7e-24, 34.03% id in 285 aa; dehydrogenase complement(3041653..3042540) Burkholderia pseudomallei K96243 3096985 YP_112268.1 CDS BPSS2265 NC_006351.1 3042681 3044030 R Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 9.8e-53, 40.22% id in 455 aa, and to Agrobacterium tumefaciens monooxygenase ATU3420 or AGR_L_2804 SWALL:Q8UAF4 (EMBL:AE009272) (453 aa) fasta scores: E(): 3.2e-114, 63.71% id in 441 aa. Similar to BPSS1672, 64.865% identity (65.753% ungapped) in 444 aa overlap; monooxygenase complement(3042681..3044030) Burkholderia pseudomallei K96243 3096986 YP_112269.1 CDS BPSS2266 NC_006351.1 3044311 3045126 R Similar to Anabaena sp. 4'-phosphopantetheinyl transferase HetI SWALL:HETI_ANASP (SWALL:P37695) (237 aa) fasta scores: E(): 7.9e-15, 31.5% id in 200 aa, and to Stigmatella aurantiaca MtaA protein SWALL:Q9RFL1 (EMBL:AF188287) (277 aa) fasta scores: E(): 1.5e-37, 43.08% id in 253 aa; 4'-phosphopantetheinyl transferase complement(3044311..3045126) Burkholderia pseudomallei K96243 3095361 YP_112270.1 CDS BPSS2267 NC_006351.1 3045344 3046597 R Similar to Oxalobacter formigenes oxalate:formate antiporter OxlT SWALL:OXLT_OXAFO (SWALL:Q51330) (417 aa) fasta scores: E(): 1.7e-11, 22.41% id in 406 aa, and to Rhizobium meliloti transport transmembrane protein r01093 or smc02603 SWALL:Q92R34 (EMBL:AL591786) (412 aa) fasta scores: E(): 3e-54, 42.85% id in 392 aa; hypothetical protein complement(3045344..3046597) Burkholderia pseudomallei K96243 3096387 YP_112271.1 CDS BPSS2268 NC_006351.1 3046960 3047433 R No significant database matches to the full length CDS. C-terminal region is similar to Agrobacterium tumefaciens actinorhodin polyketide dimerase ATU2531 or AGR_C_4599 SWALL:Q8UCF6 (EMBL:AE009199) (179 aa) fasta scores: E(): 1e-13, 37.8% id in 164 aa, and to the C-terminal region of Rhizobium etli probable 4-hydroxyphenylacetate-3-monooxygenase YP049 SWALL:Q8KL32 (EMBL:U80928) (208 aa) fasta scores: E(): 8.8e-17, 40.69% id in 145 aa. Possible alternative translational start site; hypothetical protein complement(3046960..3047433) Burkholderia pseudomallei K96243 3096388 YP_112272.1 CDS BPSS2269 NC_006351.1 3048340 3049497 R C-terminus region is weakly similar to the C-terminal region of Burkholderia cepacia transcriptional activator BviR SWALL:Q9AHP7 (EMBL:AF296284) (237 aa) fasta scores: E(): 0.025, 24.87% id in 193 aa, and to Pseudomonas chlororaphis transcriptional activator CsaR SWALL:Q939D1 (EMBL:AY040629) (241 aa) fasta scores: E(): 1.3, 25.76% id in 229 aa. Similar to BPSS1804, 52.208% identity (58.601% ungapped) in 385 aa overlap; transcriptional regulator complement(3048340..3049497) Burkholderia pseudomallei K96243 3095606 YP_112273.1 CDS lpdV NC_006351.1 3050150 3051550 R E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(3050150..3051550) Burkholderia pseudomallei K96243 3095026 YP_112274.1 CDS bkdB NC_006351.1 3051555 3053006 R Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(3051555..3053006) Burkholderia pseudomallei K96243 3096274 YP_112275.1 CDS bkdA2 NC_006351.1 3053008 3054051 R Similar to Pseudomonas putida 2-oxoisovalerate dehydrogenase beta subunit BkdA2 SWALL:ODBB_PSEPU (SWALL:P09061) (339 aa) fasta scores: E(): 3.9e-125, 87.83% id in 337 aa, and to Pseudomonas aeruginosa 2-oxoisovalerate dehydrogenase pa2248 SWALL:Q9I1M1 (EMBL:AE004650) (350 aa) fasta scores: E(): 4.7e-122, 82.37% id in 346 aa. Possible alternative translational start site; 2-oxoisovalerate dehydrogenase subunit beta complement(3053008..3054051) Burkholderia pseudomallei K96243 3096229 YP_112276.1 CDS bkdA1 NC_006351.1 3054057 3055289 R Similar to Pseudomonas putida 2-oxoisovalerate dehydrogenase alpha subunit BkdA1 SWALL:ODBA_PSEPU (SWALL:P09060) (410 aa) fasta scores: E(): 1.6e-139, 80% id in 410 aa, and to Pseudomonas aeruginosa 2-oxoisovalerate dehydrogenase pa2247 SWALL:Q9I1M2 (EMBL:AE004650) (410 aa) fasta scores: E(): 6.2e-145, 83.9% id in 410 aa; 2-oxoisovalerate dehydrogenase subunit alpha complement(3054057..3055289) Burkholderia pseudomallei K96243 3096116 YP_112277.1 CDS BPSS2274 NC_006351.1 3056541 3056981 D Weakly similar to Mycobacterium tuberculosis hypothetical protein rv1919c or mt1970 or mtv050.03C SWALL:O53961 (EMBL:AL022020) (161 aa) fasta scores: E(): 0.0014, 26.27% id in 137 aa, and to Mycobacterium leprae hypothetical protein ml1983 SWALL:Q9CBH1 (EMBL:AL583924) (155 aa) fasta scores: E(): 0.0099, 25.56% id in 133 aa; hypothetical protein 3056541..3056981 Burkholderia pseudomallei K96243 3095607 YP_112278.1 CDS BPSS2275 NC_006351.1 3057306 3058421 R Similar to Pseudomonas aeruginosa hypothetical protein pa2122 SWALL:Q9I1Z3 (EMBL:AE004639) (378 aa) fasta scores: E(): 1.8e-81, 53.53% id in 368 aa; hypothetical protein complement(3057306..3058421) Burkholderia pseudomallei K96243 3095185 YP_112279.1 CDS BPSS2276 NC_006351.1 3058719 3059654 D Similar to Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 3.1e-30, 34.48% id in 290 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2121 SWALL:Q9I1Z4 (EMBL:AE004639) (301 aa) fasta scores: E(): 8.6e-77, 67.56% id in 296 aa; LysR family transcriptional regulator 3058719..3059654 Burkholderia pseudomallei K96243 3095186 YP_112280.1 CDS BPSS2277 NC_006351.1 3059829 3060260 D hypothetical protein 3059829..3060260 Burkholderia pseudomallei K96243 3095876 YP_112281.1 CDS BPSS2278 NC_006351.1 3060560 3062218 D Similar to Mycobacterium leprae cholesterol oxidase ml0389 SWALL:Q9CCV1 (EMBL:AL583918) (569 aa) fasta scores: E(): 2.8e-82, 44.79% id in 547 aa. Weakly similar to the C-terminal region of Phanerochaete chrysosporium cellobiose dehydrogenase precursor Cdh-1 and Cdh-2 SWALL:CDH_PHACH (SWALL:Q01738) (773 aa) fasta scores: E(): 0.011, 19.96% id in 571 aa; hypothetical protein 3060560..3062218 Burkholderia pseudomallei K96243 3095902 YP_112282.1 CDS BPSS2279 NC_006351.1 3062508 3064781 R No significant database matches to the full length CDS, probable gene fusion. N-terminal region is similar to Mycobacterium tuberculosis hypothetical protein rv1869c or mtcy359.04 or mt1918 SWALL:P95146 (EMBL:Z83859) (411 aa) fasta scores: E(): 3.4e-38, 33.66% id in 407 aa, and to Pseudomonas putida putidaredoxin reductase CamA SWALL:CAMA_PSEPU (SWALL:P16640) (422 aa) fasta scores: E(): 4.7e-29, 29.68% id in 411 aa. C-terminal region is similar to Rhizobium loti hypothetical protein mlr3635 SWALL:Q98FS8 (EMBL:AP003002) (361 aa) fasta scores: E(): 1.5e-27, 31.84% id in 336 aa. Possible alternative translational start sites; bifunctional pyridine nucleotide-disulfide oxidoreductase/patatin-like phospholipase complement(3062508..3064781) Burkholderia pseudomallei K96243 3095903 YP_112283.1 CDS BPSS2280 NC_006351.1 3064914 3065309 R Similar to Ralstonia solanacearum hypothetical protein rsc1511 or rs03793 SWALL:Q8XZ93 (EMBL:AL646065) (122 aa) fasta scores: E(): 6.2e-06, 36.92% id in 130 aa, and to the C-terminal region of Escherichia coli, and Shigella flexneri DnaK suppressor protein SWALL:DKSA_ECOLI (SWALL:P18274) (151 aa) fasta scores: E(): 0.0069, 28.81% id in 118 aa; DksA/TraR C4-type zinc finger protein complement(3064914..3065309) Burkholderia pseudomallei K96243 3097266 YP_112284.1 CDS BPSS2281 NC_006351.1 3066655 3067926 D Similar to Alcaligenes eutrophus intracellular PHB depolymerase PhaZre SWALL:O87189 (EMBL:AB017612) (419 aa) fasta scores: E(): 6.3e-54, 38.47% id in 421 aa, and to Xanthomonas campestris PHB depolymerase xcc1353 SWALL:AAM40651 (EMBL:AE012234) (466 aa) fasta scores: E(): 3.5e-56, 39.26% id in 438 aa; PHB depolymerase 3066655..3067926 Burkholderia pseudomallei K96243 3097267 YP_112285.1 CDS BPSS2282 NC_006351.1 3068154 3069995 D class I; catalyzes the formation of deoxyribonucleotides from their corresponding ribonucleotides; ribonucleotide reductase-like protein 3068154..3069995 Burkholderia pseudomallei K96243 3095815 YP_112286.1 CDS BPSS2283 NC_006351.1 3070172 3071881 D Similar to Chlorobium tepidum hypothetical protein ct0831 SWALL:AAM72067 (EMBL:AE012850) (515 aa) fasta scores: E(): 3e-53, 37.37% id in 495 aa, and to Pseudomonas aeruginosa hypothetical protein pa4701 SWALL:Q9HV96 (EMBL:AE004884) (520 aa) fasta scores: E(): 4.6e-49, 36.63% id in 505 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 3070172..3071881 Burkholderia pseudomallei K96243 3095816 YP_112287.1 CDS BPSS2284 NC_006351.1 3072406 3073437 D Similar to Streptomyces coelicolor hypothetical protein SCO0162 or SCJ1.11 SWALL:Q9RJ03 (EMBL:AL939104) (330 aa) fasta scores: E(): 1.5e-26, 37.3% id in 319 aa, and to Streptomyces coelicolor hypothetical protein SCO0215 or SCJ12.27c SWALL:Q9RI33 (EMBL:AL939104) (335 aa) fasta scores: E(): 2.3e-23, 34.28% id in 315 aa. CDS is extended at the N-terminus in comparison to some orthologues; hypothetical protein 3072406..3073437 Burkholderia pseudomallei K96243 3096601 YP_112288.1 CDS BPSS2285 NC_006351.1 3073434 3075266 D Similar to the C-terminal region of Stylosanthes hamata high affinity sulphate transporter 2 ST2 SWALL:SUT2_STYHA (SWALL:P53392) (662 aa) fasta scores: E(): 4.5e-28, 25% id in 584 aa. Similar to Corynebacterium glutamicum sulfate permease and related transporters cgl1051 SWALL:BAB98444 (EMBL:AP005277) (579 aa) fasta scores: E(): 3.4e-34, 35.87% id in 577 aa. CDS is extended at the N-terminus in comparison to orthologues; ulfate transporter family protein 3073434..3075266 Burkholderia pseudomallei K96243 3095829 YP_112289.1 CDS BPSS2286 NC_006351.1 3075738 3076256 R Poor similarity to Aeropyrum pernix hypothetical protein ape2489 SWALL:Q9Y8Z5 (EMBL:AP000064) (150 aa) fasta scores: E(): 1.6e-10, 39.39% id in 132 aa, and to Pyrobaculum aerophilum conserved protein with 2 CBS domains pae2961 SWALL:Q8ZU39 (EMBL:AE009903) (139 aa) fasta scores: E(): 7.6e-08, 28.98% id in 138 aa; hypothetical protein complement(3075738..3076256) Burkholderia pseudomallei K96243 3095830 YP_112290.1 CDS BPSS2287 NC_006351.1 3076641 3077294 D Similar to Methanopyrus kandleri nitroreductase mk1490 SWALL:Q8TVA2 (EMBL:AE010439) (233 aa) fasta scores: E(): 0.00036, 32.21% id in 208 aa. C-terminal region is weakly similar to Pyrococcus abyssi hypothetical protein Pab1763 pab1763 SWALL:Q9V092 (EMBL:AJ248285) (196 aa) fasta scores: E(): 3.7e-07, 28.57% id in 196 aa; hypothetical protein 3076641..3077294 Burkholderia pseudomallei K96243 3097094 YP_112291.1 CDS BPSS2288 NC_006351.1 3077355 3077789 R Similar to Chenopodium rubrum 18.3 kDa class I heat shock protein HSP18 SWALL:HS11_CHERU (SWALL:Q05832) (161 aa) fasta scores: E(): 2.8e-10, 37.06% id in 143 aa, and to Ralstonia solanacearum small heat shock protein rsc0200 or rs00632 SWALL:Q8Y2Y1 (EMBL:AL646058) (140 aa) fasta scores: E(): 8.7e-23, 52.44% id in 143 aa; heat shock protein 20 complement(3077355..3077789) Burkholderia pseudomallei K96243 3097095 YP_112292.1 CDS BPSS2289 NC_006351.1 3078195 3079322 R Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2e-06, 27.79% id in 421 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1084 or rs04103 SWALL:Q8Y0G0 (EMBL:AL646062) (364 aa) fasta scores: E(): 1.9e-17, 31.41% id in 382 aa; porin protein complement(3078195..3079322) Burkholderia pseudomallei K96243 3095957 YP_112293.1 CDS BPSS2290 NC_006351.1 3079402 3081207 R Similar to Pseudomonas oleovorans medium-chain-fatty-acid--CoA ligase AlkK SWALL:ALKK_PSEOL (SWALL:Q00594) (546 aa) fasta scores: E(): 2.6e-29, 31.56% id in 583 aa, and to Pseudomonas aeruginosa probable medium-chain acyl-CoA ligase pa3924 SWALL:Q9HX89 (EMBL:AE004810) (560 aa) fasta scores: E(): 2.5e-63, 47.77% id in 584 aa; AMP-binding protein complement(3079402..3081207) Burkholderia pseudomallei K96243 3095958 YP_112294.1 CDS BPSS2291 NC_006351.1 3081508 3084273 R Weakly similar to Klebsiella pneumoniae AcoK SWALL:Q48411 (EMBL:U10553) (921 aa) fasta scores: E(): 1.8e-39, 28.42% id in 943 aa, and to Pseudomonas oleovorans regulatory protein AlkS SWALL:ALKS_PSEOL (SWALL:P17051) (882 aa) fasta scores: E(): 8.1e-12, 23.02% id in 925 aa; GerE family regulatory protein complement(3081508..3084273) Burkholderia pseudomallei K96243 3097115 YP_112295.1 CDS BPSS2292 NC_006351.1 3084437 3085498 D hypothetical protein 3084437..3085498 Burkholderia pseudomallei K96243 3097208 YP_112296.1 CDS BPSS2293 NC_006351.1 3085601 3086584 D Similar to Escherichia coli quinone oxidoreductase Qor or Hcz SWALL:QOR_ECOLI (SWALL:P28304) (327 aa) fasta scores: E(): 6.7e-49, 46.93% id in 326 aa, and to Ralstonia solanacearum probable NADPH:quinone reductase, zeta-crystallin homolog oxidoreductase qor or rsc2184 or rs01415 SWALL:Q8XXD1 (EMBL:AL646068) (324 aa) fasta scores: E(): 3.7e-69, 58.51% id in 323 aa. Similar to BPSL1169, 56.037% identity (56.037% ungapped) in 323 aa overlap; quinone oxidoreductase 3085601..3086584 Burkholderia pseudomallei K96243 3097209 YP_112297.1 CDS BPSS2294 NC_006351.1 3086586 3087434 D Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 4.3e-28, 39.86% id in 291 aa, and to Pseudomonas aeruginosa taurine dioxygenase pa3935 SWALL:Q9HX81 (EMBL:AE004811) (277 aa) fasta scores: E(): 1.3e-28, 42.06% id in 290 aa; taurine catabolism dioxygenase TauD, TfdA family protein 3086586..3087434 Burkholderia pseudomallei K96243 3094912 YP_112298.1 CDS BPSS2295 NC_006351.1 3087533 3088552 D Weakly similar to Rhizobium loti hypothetical protein mll0106 SWALL:Q98NK0 (EMBL:AP002994) (309 aa) fasta scores: E(): 1.9e-08, 25.55% id in 313 aa, and to Thermoanaerobacter tengcongensis hypothetical protein tte0719 SWALL:Q8RBU0 (EMBL:AE013040) (275 aa) fasta scores: E(): 3e-07, 28.88% id in 315 aa; hypothetical protein 3087533..3088552 Burkholderia pseudomallei K96243 3094913 YP_112299.1 CDS BPSS2296 NC_006351.1 3088719 3090044 D Similar to Caulobacter crescentus major facilitator family transporter cc0336 SWALL:Q9AB95 (EMBL:AE005706) (438 aa) fasta scores: E(): 1.8e-23, 30.71% id in 394 aa, and weakly similar to Bacillus subtilis hexuronate transporter ExuT SWALL:EXUT_BACSU (SWALL:O34456) (422 aa) fasta scores: E(): 9.6e-15, 24.62% id in 398 aa; transport protein 3088719..3090044 Burkholderia pseudomallei K96243 3096453 YP_112300.1 CDS BPSS2297 NC_006351.1 3090067 3090663 D Similar to Caulobacter crescentus hypothetical protein cc2185 SWALL:Q9A6A9 (EMBL:AE005890) (207 aa) fasta scores: E(): 3.8e-23, 45.72% id in 199 aa, and to Deinococcus radiodurans hypothetical protein dr0945 SWALL:Q9RVS7 (EMBL:AE001947) (195 aa) fasta scores: E(): 6.2e-21, 43.78% id in 185 aa; hypothetical protein 3090067..3090663 Burkholderia pseudomallei K96243 3096454 YP_112301.1 CDS BPSS2298 NC_006351.1 3090660 3091382 D Similar to the C-terminal region of Caulobacter crescentus hypothetical protein cc1843 SWALL:Q9A783 (EMBL:AE005858) (214 aa) fasta scores: E(): 1.2e-16, 31.53% id in 222 aa, and to Rhizobium meliloti hypothetical protein r01644 or smc00952 SWALL:Q92PT6 (EMBL:AL591787) (221 aa) fasta scores: E(): 3.1e-15, 32.35% id in 204 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 3090660..3091382 Burkholderia pseudomallei K96243 3096806 YP_112302.1 CDS BPSS2299 NC_006351.1 <3092021 3094897 D Similar to Aquifex aeolicus DMS reductase chain A AQ_1234 SWALL:O67280 (EMBL:AE000730) (984 aa) fasta scores: E(): 1.3e-171, 49.21% id in 949 aa. Weakly similar to Salmonella typhimurium thiosulfate reductase precursor PhsA or stm2065 SWALL:PHSA_SALTY (SWALL:P37600) (758 aa) fasta scores: E(): 1.3e-15, 24.03% id in 903 aa. CDS is truncated at the N-terminus in comparison to some orthologues; molybdopterin oxidoreductase <3092021..3094897 Burkholderia pseudomallei K96243 3095001 YP_112303.1 CDS BPSS2300 NC_006351.1 3094911 3095708 D N-terminus is similar to the N-terminal regions of Escherichia coli anaerobic dimethyl sulfoxide reductase chain B DmsB SWALL:DMSB_ECOLI (SWALL:P18776) (204 aa) fasta scores: E(): 5.4e-16, 38.41% id in 177 aa, and Aquifex aeolicus DMSO reductase chain B AQ_1232 SWALL:O67279 (EMBL:AE000730) (254 aa) fasta scores: E(): 1.2e-47, 66.82% id in 205 aa. Similarity with Aquifex aeolicus and other proteins ends at a glycine rich region, residues 209 to 227. Possible fusion protein; iron-sulfur cluster protein 3094911..3095708 Burkholderia pseudomallei K96243 3095002 YP_112304.1 CDS BPSS2301 NC_006351.1 3095766 3096716 D Similar to Rhizobium loti DMSO reductase chain C mll5612 SWALL:Q98BE5 (EMBL:AP003007) (311 aa) fasta scores: E(): 5.9e-26, 36.42% id in 324 aa. N-terminus is weakly similar to the N-terminal region of Escherichia coli anaerobic dimethyl sulfoxide reductase chain C DmsC SWALL:DMSC_ECOLI (SWALL:P18777) (287 aa) fasta scores: E(): 0.03, 27.67% id in 224 aa; hypothetical protein 3095766..3096716 Burkholderia pseudomallei K96243 3097188 YP_112305.1 CDS BPSS2302 NC_006351.1 3097926 3098816 D Weakly similar to Leptospira interrogans polysaccharide deacetylase la1998 SWALL:AAN49197 (EMBL:AE011373) (300 aa) fasta scores: E(): 5e-16, 27.75% id in 245 aa. C-terminal region is weakly similar to Lactococcus lactis hypothetical protein SWALL:Q8VUB1 (EMBL:AF188107) (250 aa) fasta scores: E(): 9.4e-13, 27.34% id in 245 aa. Similar to BPSS1928, 55.512% identity (57.317% ungapped) in 254 aa overlap; hypothetical protein 3097926..3098816 Burkholderia pseudomallei K96243 3097189 YP_112306.1 CDS BPSS2303 NC_006351.1 3099281 3100672 D No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Fusobacterium nucleatum hypothetical cytosolic protein fn0456 SWALL:Q8RG61 (EMBL:AE010557) (380 aa) fasta scores: E(): 3.9e-29, 33.64% id in 324 aa, and Borrelia burgdorferi hypothetical protein Bb0165 bb0165 SWALL:O51187 (EMBL:AE001127) (614 aa) fasta scores: E(): 4.5e-11, 28.86% id in 336 aa; hypothetical protein 3099281..3100672 Burkholderia pseudomallei K96243 3096189 YP_112307.1 CDS BPSS2304 NC_006351.1 3100875 3103394 R Internal region is similar to an internal region of Escherichia coli penicillin-binding protein 1A MrcA or PonA SWALL:PBPA_ECOLI (SWALL:P02918) (850 aa) fasta scores: E(): 1.4e-21, 30.8% id in 737 aa. C-terminal region is similar to Chlorobium tepidum penicillin-binding protein 1 CT0176 SWALL:AAM71424 (EMBL:AE012797) (763 aa) fasta scores: E(): 1.5e-58, 36.31% id in 771 aa; penicillin-binding protein complement(3100875..3103394) Burkholderia pseudomallei K96243 3096190 YP_112308.1 CDS BPSS2305 NC_006351.1 3104258 3105826 R Similar to Xanthomonas axonopodis disulphide-isomerase xac3878 SWALL:AAM38720 (EMBL:AE012037) (526 aa) fasta scores: E(): 3.7e-46, 36.06% id in 524 aa, and to Xanthomonas campestris disulphide-isomerase xcc3823 SWALL:AAM43059 (EMBL:AE012503) (525 aa) fasta scores: E(): 4.2e-41, 34.04% id in 517 aa; lipoprotein complement(3104258..3105826) Burkholderia pseudomallei K96243 3096196 YP_112309.1 CDS BPSS2306 NC_006351.1 3106526 3107698 R Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.9e-19, 35.01% id in 377 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 1.4e-45, 43.18% id in 389 aa. Similar to BPSS1679, 57.069% identity (58.421% ungapped) in 389 aa overlap, and to BPSS0252, 51.451% identity (54.167% ungapped) in 379 aa overlap; porin protein complement(3106526..3107698) Burkholderia pseudomallei K96243 3095436 YP_112310.1 CDS BPSS2307 NC_006351.1 3108024 3109610 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(3108024..3109610) Burkholderia pseudomallei K96243 3095437 YP_112311.1 CDS BPSS2308 NC_006351.1 3110107 3110430 D hypothetical protein 3110107..3110430 Burkholderia pseudomallei K96243 3097022 YP_112312.1 CDS BPSS2309 NC_006351.1 3110622 3111197 R Similar to Agrobacterium tumefaciens acetyltransferase ATU2080 or AGR_C_3768 SWALL:Q8UDP1 (EMBL:AE009158) (177 aa) fasta scores: E(): 5.5e-19, 43.42% id in 175 aa, and to Escherichia coli hypothetical acetyltransferase YhhY SWALL:YHHY_ECOLI (SWALL:P46854) (162 aa) fasta scores: E(): 1.1e-17, 43.29% id in 164 aa. CDS is extended at the N-terminus in comparison to some orthologues; acetyltransferase (GNAT) family protein complement(3110622..3111197) Burkholderia pseudomallei K96243 3097023 YP_112313.1 CDS BPSS2310 NC_006351.1 3111194 3111751 R Similar to Pseudomonas aeruginosa hypothetical protein pa1377 SWALL:Q9I3W7 (EMBL:AE004567) (177 aa) fasta scores: E(): 1.1e-13, 32.92% id in 164 aa, and to Salmonella typhimurium transferase stm3546 SWALL:Q8ZLG1 (EMBL:AE008863) (162 aa) fasta scores: E(): 5.9e-13, 35.36% id in 164 aa; acetyltransferase (GNAT) family protein complement(3111194..3111751) Burkholderia pseudomallei K96243 3096367 YP_112314.1 CDS BPSS2311 NC_006351.1 3111756 3113117 R Similar to Pseudomonas aeruginosa hypothetical protein pa2530 SWALL:Q9I0V3 (EMBL:AE004680) (441 aa) fasta scores: E(): 4.3e-78, 50.45% id in 436 aa, and to Anabaena sp. hypothetical protein all1089 SWALL:Q8YXW8 (EMBL:AP003584) (448 aa) fasta scores: E(): 9.4e-50, 36.01% id in 422 aa; hypothetical protein complement(3111756..3113117) Burkholderia pseudomallei K96243 3096368 YP_112315.1 CDS BPSS2312 NC_006351.1 3113117 3114550 R Similar to Pseudomonas aeruginosa hypothetical protein pa2529 SWALL:Q9I0V4 (EMBL:AE004680) (477 aa) fasta scores: E(): 5.3e-102, 60.87% id in 478 aa. Weakly similar to Escherichia coli, and Shigella flexneri TldD protein SWALL:TLDD_ECOLI (SWALL:P46473) (481 aa) fasta scores: E(): 1.6e-12, 27.23% id in 437 aa; modulator of DNA gyrase complement(3113117..3114550) Burkholderia pseudomallei K96243 3097148 YP_112316.1 CDS BPSS2314 NC_006351.1 3115766 3117166 D Similar to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc0021 or rs01843 SWALL:Q8Y3F9 (EMBL:AL646057) (487 aa) fasta scores: E(): 5.6e-64, 51.92% id in 468 aa. C-terminus is similar to the C-terminal region of Bacillus subtilis sensor protein DegS or SacU SWALL:DEGS_BACSU (SWALL:P13799) (385 aa) fasta scores: E(): 1.4e-19, 34.83% id in 267 aa; sensor kinase 3115766..3117166 Burkholderia pseudomallei K96243 3095719 YP_112317.1 CDS BPSS2315 NC_006351.1 3117163 3117810 D Similar to Escherichia coli, and Shigella flexneri nitrate/nitrite response regulator protein NarL or FrdR SWALL:NARL_ECOLI (SWALL:P10957) (216 aa) fasta scores: E(): 2.5e-21, 38.53% id in 205 aa, and to Brucella melitensis transcriptional regulatory protein bmei1582 SWALL:Q8YFE0 (EMBL:AE009594) (213 aa) fasta scores: E(): 3.7e-28, 46.53% id in 202 aa; response regulator protein 3117163..3117810 Burkholderia pseudomallei K96243 3095036 YP_112318.1 CDS BPSS2316 NC_006351.1 3118004 3118600 R Similar to Ralstonia solanacearum probable signal peptide protein rsc2958 or rs01342 SWALL:Q8XV73 (EMBL:AL646072) (211 aa) fasta scores: E(): 8.3e-26, 40.59% id in 202 aa, and to Neisseria meningitidis hypothetical protein nmb1963 SWALL:Q9JXN1 (EMBL:AE002544) (196 aa) fasta scores: E(): 2.4e-13, 30.3% id in 198 aa; hypothetical protein complement(3118004..3118600) Burkholderia pseudomallei K96243 3095037 YP_112319.1 CDS BPSS2317 NC_006351.1 3118893 3119657 R Similar to Pseudomonas aeruginosa hypothetical protein pa0862 SWALL:Q9I579 (EMBL:AE004521) (260 aa) fasta scores: E(): 1.6e-52, 50.83% id in 240 aa; hypothetical protein complement(3118893..3119657) Burkholderia pseudomallei K96243 3096972 YP_112320.1 CDS BPSS2318 NC_006351.1 3119667 3122108 R Similar to Rhizobium loti hypothetical protein mlr3171 SWALL:Q98GU5 (EMBL:AP003001) (832 aa) fasta scores: E(): 6.3e-114, 39.3% id in 804 aa, and to Pseudomonas aeruginosa hypothetical protein pa0861 SWALL:Q9I580 (EMBL:AE004521) (818 aa) fasta scores: E(): 1.2e-112, 39.82% id in 786 aa. Possible alternative translational start site; hypothetical protein complement(3119667..3122108) Burkholderia pseudomallei K96243 3096973 YP_112321.1 CDS lipA2 NC_006351.1 3122425 3123495 R Similar to Burkholderia cepacia lipase precursor LipA SWALL:LIP_BURCE (SWALL:P22088) (364 aa) fasta scores: E(): 2.1e-83, 65.65% id in 364 aa, and to Pseudomonas sp. lipase precursor Lip SWALL:LIP_PSES5 (SWALL:P25275) (364 aa) fasta scores: E(): 5.4e-84, 66.2% id in 364 aa. Similar to BPSS1741, 67.397% identity (70.690% ungapped) in 365 aa overlap; lipase precursor complement(3122425..3123495) Burkholderia pseudomallei K96243 3095019 YP_112322.1 CDS BPSS2320 NC_006351.1 3123622 3124386 R C-terminal region is similar to Anabaena sp. 4'-phosphopantetheinyl transferase HetI SWALL:HETI_ANASP (SWALL:P37695) (237 aa) fasta scores: E(): 2.3e-15, 32.75% id in 229 aa, and Ralstonia solanacearum phosphopantetheinyl transferase rsp0163 or rs05515 SWALL:Q8XTF0 (EMBL:AL646076) (272 aa) fasta scores: E(): 2.8e-12, 34.22% id in 225 aa. Possible alternative translational start sites; 4'-phosphopantetheinyl transferase complement(3123622..3124386) Burkholderia pseudomallei K96243 3096967 YP_112323.1 CDS BPSS2321 NC_006351.1 3124449 3124847 R Poor database matches. Weakly similar to the C-terminal region of Vibrio cholerae hypothetical protein vca1012 SWALL:Q9KKT8 (EMBL:AE004427) (155 aa) fasta scores: E(): 0.79, 28.92% id in 121 aa; hypothetical protein complement(3124449..3124847) Burkholderia pseudomallei K96243 3096997 YP_112324.1 CDS BPSS2322 NC_006351.1 3124887 3126185 R hypothetical protein complement(3124887..3126185) Burkholderia pseudomallei K96243 3096998 YP_112325.1 CDS BPSS2323 NC_006351.1 3126182 3126964 R Similar to Escherichia coli O157:H7 hypothetical protein z1555 or ecs1295 SWALL:Q8XAK5 (EMBL:AE005305) (262 aa) fasta scores: E(): 1.5e-24, 33.33% id in 261 aa, and to Vibrio cholerae hypothetical protein vca0853 SWALL:Q9KL93 (EMBL:AE004413) (247 aa) fasta scores: E(): 5.5e-15, 27.63% id in 228 aa; hypothetical protein complement(3126182..3126964) Burkholderia pseudomallei K96243 3096923 YP_112326.1 CDS BPSS2324 NC_006351.1 3127021 3128448 R Weakly similar to Vibrio cholerae hypothetical protein vca0854 SWALL:Q9KL92 (EMBL:AE004413) (419 aa) fasta scores: E(): 1.3e-11, 25.1% id in 470 aa, and to Borrelia burgdorferi hypothetical protein bbj27 SWALL:O50782 (EMBL:AE000787) (411 aa) fasta scores: E(): 1.6e-06, 21.8% id in 477 aa; permease complement(3127021..3128448) Burkholderia pseudomallei K96243 3096924 YP_112327.1 CDS BPSS2325 NC_006351.1 3128448 3129149 R Similar to Streptomyces coelicolor ABC-transporter ATP binding protein SCO5870 or SC2E9.11 SWALL:O54136 (EMBL:AL939125) (230 aa) fasta scores: E(): 2.5e-33, 52.48% id in 221 aa, and to Thermotoga maritima hypothetical ABC transporter ATP-binding protein tm0352 SWALL:Y352_THEMA (SWALL:Q9WYI7) (234 aa) fasta scores: E(): 4.7e-33, 48.01% id in 227 aa; ABC-transporter ATP binding protein complement(3128448..3129149) Burkholderia pseudomallei K96243 3097164 YP_112328.1 CDS BPSS2326 NC_006351.1 3129149 3130636 R Similar to Caulobacter crescentus monooxygenase, flavin-binding family cc0774 SWALL:Q9AA34 (EMBL:AE005753) (458 aa) fasta scores: E(): 2e-54, 38.84% id in 466 aa, and to the N-terminal region of Homo sapiens dimethylaniline monooxygenase [N-oxide forming] 1 FMO1 SWALL:FMO1_HUMAN (SWALL:Q01740) (531 aa) fasta scores: E(): 1.2e-22, 34.43% id in 424 aa. CDS is extended at the N-terminus in comparison to orthologues; flavin-binding monooxygenase-like protein complement(3129149..3130636) Burkholderia pseudomallei K96243 3097165 YP_112329.1 CDS BPSS2327 NC_006351.1 3130669 3134790 R No significant database matches to the full length CDS. N-terminal region is similar to Bacillus halodurans cytochrome P450 hydroxylase bh0579 SWALL:Q9KFA6 (EMBL:AP001509) (453 aa) fasta scores: E(): 3.6e-38, 32.75% id in 461 aa, and to the N-terminal region of Bacillus megaterium bifunctional P-450:NADPH-p450 reductase Cyp102A1 or Cyp102 SWALL:CPXB_BACME (SWALL:P14779) (1048 aa) fasta scores: E(): 1.1e-24, 25.57% id in 606 aa; cytochrome P450 family protein complement(3130669..3134790) Burkholderia pseudomallei K96243 3095013 YP_112330.1 CDS BPSS2328 NC_006351.1 3134787 3141608 R Internal regions are weakly similar to the N-terminal region of Streptomyces coelicolor multi-domain beta keto-acyl synthase sco0126 or scj21.07 SWALL:Q9S200 (EMBL:AL939104) (2082 aa) fasta scores: E(): 2.9e-31, 28.89% id in 1059 aa, and to the C-terminal region of Streptomyces avermitilis modular polyketide synthase SWALL:Q93HH9 (EMBL:AB070941) (2365 aa) fasta scores: E(): 7.5e-23, 27.79% id in 1903 aa; beta keto-acyl synthase complement(3134787..3141608) Burkholderia pseudomallei K96243 3094995 YP_112331.1 CDS BPSS2329 NC_006351.1 3141712 3143346 R Similar to internal regions of Streptomyces avermitilis modular polyketide synthase PteA1 SWALL:Q93H87 (EMBL:AB070949) (6048 aa) fasta scores: E(): 2e-14, 28.35% id in 529 aa, and to Streptomyces venezuelae type I polyketide synthase PikAI SWALL:Q9ZGI5 (EMBL:AF079138) (4613 aa) fasta scores: E(): 3e-13, 27.83% id in 521 aa; acyl transferase complement(3141712..3143346) Burkholderia pseudomallei K96243 3094996 YP_112332.1 CDS BPSS2330 NC_006351.1 3143858 3146491 D Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsp0362 or rs00775 SWALL:Q8XSV5 (EMBL:AL646078) (805 aa) fasta scores: E(): 2.2e-07, 24.28% id in 873 aa. C-terminal region is similar to Zymomonas mobilis hypothetical protein SWALL:O69016 (EMBL:AF086791) (169 aa) fasta scores: E(): 1.1e-25, 55.28% id in 161 aa; hypothetical protein 3143858..3146491 Burkholderia pseudomallei K96243 3094894 YP_112333.1 CDS BPSS2331 NC_006351.1 3146484 3147467 D Similar to Ralstonia solanacearum probable lipoprotein precursor rsc2959 or rs01340 SWALL:Q8XV72 (EMBL:AL646072) (269 aa) fasta scores: E(): 2e-29, 48.99% id in 249 aa, and to Pseudomonas aeruginosa hypothetical protein pa2800 SWALL:Q9I043 (EMBL:AE004707) (234 aa) fasta scores: E(): 3.9e-20, 40.69% id in 231 aa. CDS is extended at the C-terminus in comparison to orthologues; lipoprotein 3146484..3147467 Burkholderia pseudomallei K96243 3094895 YP_112334.1 CDS BPSS2332 NC_006351.1 3147703 3148251 R hypothetical protein complement(3147703..3148251) Burkholderia pseudomallei K96243 3095115 YP_112335.1 CDS BPSS2333 NC_006351.1 3148295 3149641 R Similar to Bacillus sphaericus adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA SWALL:BIOA_BACSH (SWALL:P22805) (455 aa) fasta scores: E(): 1.3e-45, 33.48% id in 430 aa, and to Ralstonia solanacearum aminotransferase rsc0082 or rs02256 SWALL:Q8Y398 (EMBL:AL646057) (450 aa) fasta scores: E(): 3.7e-128, 73.03% id in 445 aa; hypothetical protein complement(3148295..3149641) Burkholderia pseudomallei K96243 3095116 YP_112336.1 CDS BPSS2334 NC_006351.1 3149638 3150708 R Weakly similar to Penicillium chrysogenum acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase precursor Aat or pendE SWALL:AAAA_PENCH (SWALL:P15802) (357 aa) fasta scores: E(): 1.5e-07, 26.45% id in 344 aa. Similar to Ralstonia solanacearum hypothetical protein rsc1742 rsc1742 or rs02930 SWALL:Q8XYL6 (EMBL:AL646066) (350 aa) fasta scores: E(): 1.1e-52, 47.73% id in 331 aa; hypothetical protein complement(3149638..3150708) Burkholderia pseudomallei K96243 3094903 YP_112337.1 CDS glnQ NC_006351.1 3150721 3151443 R similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein complement(3150721..3151443) Burkholderia pseudomallei K96243 3095798 YP_112338.1 CDS glnP NC_006351.1 3151446 3152102 R similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease complement(3151446..3152102) Burkholderia pseudomallei K96243 3095377 YP_112339.1 CDS glnH NC_006351.1 3152167 3152919 R similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein complement(3152167..3152919) Burkholderia pseudomallei K96243 3095223 YP_112340.1 CDS BPSS2338 NC_006351.1 3153366 3154073 R Weakly similar to Synechocystis sp. hypothetical protein slr1977 SWALL:P74128 (EMBL:D90912) (244 aa) fasta scores: E(): 0.0058, 25.86% id in 232 aa; hypothetical protein complement(3153366..3154073) Burkholderia pseudomallei K96243 3094988 YP_112341.1 CDS shc NC_006351.1 3154080 3156053 R Similar to Zymomonas mobilis squalene--hopene cyclase Shc SWALL:SQHC_ZYMMO (SWALL:P33990) (658 aa) fasta scores: E(): 7.5e-169, 62.28% id in 647 aa, and to Rhodopseudomonas palustris squalene-hopene cyclase Shc SWALL:O69790 (EMBL:Y09979) (654 aa) fasta scores: E(): 1.7e-182, 66.19% id in 639 aa; squalene--hopene cyclase complement(3154080..3156053) Burkholderia pseudomallei K96243 3095684 YP_112342.1 CDS BPSS2340 NC_006351.1 3156381 3157229 R Similar to the C-terminal region of Capsicum annuum phytoene synthase, chloroplast precursor PSY1 SWALL:PSY_CAPAN (SWALL:P37272) (419 aa) fasta scores: E(): 8.8e-16, 32.72% id in 272 aa, and the full length to Bradyrhizobium japonicum hypothetical protein SWALL:O06002 (EMBL:X86552) (279 aa) fasta scores: E(): 9.1e-55, 55.84% id in 265 aa; squalene/phytoene synthase complement(3156381..3157229) Burkholderia pseudomallei K96243 3094989 YP_112343.1 CDS estC NC_006351.1 3157746 3158651 D Similar to Burkholderia gladioli esterase EstC SWALL:Q9LAB8 (EMBL:AF144381) (298 aa) fasta scores: E(): 2.3e-65, 64.78% id in 284 aa, and to Oryza sativa PIR7B protein SWALL:PI7B_ORYSA (SWALL:Q43360) (268 aa) fasta scores: E(): 2.3e-05, 29.43% id in 299 aa; esterase 3157746..3158651 Burkholderia pseudomallei K96243 3095087 YP_112344.1 CDS BPSS2342 NC_006351.1 3158698 3159633 R Similar to the C-terminal region of Thermoanaerobacter tengcongensis diguanylate cyclase/phosphodiesterase domain 1 tte1100 SWALL:Q8RAU5 (EMBL:AE013073) (670 aa) fasta scores: E(): 8e-21, 32.66% id in 300 aa. C-terminus is similar to the C-terminal region of Agrobacterium tumefaciens GGDEF family protein ATU2179 or AGR_C_3960 SWALL:Q8UDE8 (EMBL:AE009168) (400 aa) fasta scores: E(): 3.1e-22, 34.67% id in 274 aa; hypothetical protein complement(3158698..3159633) Burkholderia pseudomallei K96243 3097039 YP_112345.1 CDS BPSS2343 NC_006351.1 3159630 3160241 R Weakly similar to Vibrio cholerae hypothetical protein vc1083 SWALL:Q9KT22 (EMBL:AE004189) (194 aa) fasta scores: E(): 1.3e-08, 29.55% id in 203 aa, and to Bacillus halodurans inhibition of CheR-mediated methylation of MCPs bh2434 SWALL:Q9KA56 (EMBL:AP001515) (209 aa) fasta scores: E(): 0.017, 25.11% id in 211 aa. Possible C-terminal portion of a pseudogene. CDS is similar to the C-terminal regions of larger proteins, including Vibrio cholerae response regulator vca0189 SWALL:Q9KMX7 (EMBL:AE004359) (334 aa) fasta scores: E(): 4.5e-12, 29.79% id in 198 aa. Upstream CDS, BPSS2344, is similar to the N-terminal regions of the same proteins; hypothetical protein complement(3159630..3160241) Burkholderia pseudomallei K96243 3097040 YP_112346.1 CDS BPSS2344 NC_006351.1 3160246 3160614 R Similar to Listeria monocytogenes, and Listeria innocua chemotaxis protein lmo0691 or lin0699 SWALL:CHEY_LISMO (SWALL:Q48767) (119 aa) fasta scores: E(): 5e-06, 33.33% id in 117 aa, and to Vibrio cholerae response regulator vc1082 SWALL:Q9KT23 (EMBL:AE004189) (121 aa) fasta scores: E(): 7.6e-20, 50.83% id in 120 aa. Possible N-terminal portion of a pseudogene. CDS is also similar to the N-terminal regions of larger proteins, including Vibrio cholerae response regulator vca0189 SWALL:Q9KMX7 (EMBL:AE004359) (334 aa) fasta scores: E(): 8.1e-16, 43.96% id in 116 aa. Downstream CDS, BPSS2343, is similar to the C-terminal regions of the same proteins. Similar to BPSS0814, 62.810% identity (62.810% ungapped) in 121 aa overlap; response regulator protein complement(3160246..3160614) Burkholderia pseudomallei K96243 3094944 YP_112347.1 CDS BPSS2345 NC_006351.1 3161120 3163402 D No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Brucella melitensis sensory transduction protein kinase bmei0947 SWALL:Q8YH57 (EMBL:AE009535) (767 aa) fasta scores: E(): 1.7e-39, 35.64% id in 418 aa, and Caulobacter crescentus sensory box histidine kinase/response regulator cc2874 SWALL:Q9A4G0 (EMBL:AE005952) (794 aa) fasta scores: E(): 1.6e-34, 33.82% id in 541 aa. Possible alternative translational start site; sensory kinase 3161120..3163402 Burkholderia pseudomallei K96243 3094945 YP_112348.1 CDS BPSS2346 NC_006351.1 3163794 3164351 R Similar to Xanthomonas campestris hypothetical protein xcc1433 SWALL:AAM40730 (EMBL:AE012243) (184 aa) fasta scores: E(): 7.5e-36, 55.8% id in 181 aa, and to Chlorobium tepidum hypothetical protein ct1462 SWALL:AAM72690 (EMBL:AE012903) (187 aa) fasta scores: E(): 2.1e-35, 56.28% id in 183 aa; hypothetical protein complement(3163794..3164351) Burkholderia pseudomallei K96243 3095142 YP_112349.1 CDS BPSS2347 NC_006351.1 3164715 3165320 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3164715..3165320 Burkholderia pseudomallei K96243 3095303 YP_112350.1 CDS BPSS2347a NC_006351.1 3165301 3165498 D Similar to Ralstonia solanacearum hypothetical protein rsc0035 or rs01858 SWALL:Q8Y3E5 (EMBL:AL646057) (65 aa) fasta scores: E(): 3.7e-06, 45.16% id in 62 aa, and to Neisseria meningitidis hypothetical protein nmb2145 SWALL:Q9JXA7 (EMBL:AE002562) (59 aa) fasta scores: E(): 0.0052, 34% id in 50 aa; hypothetical protein 3165301..3165498 Burkholderia pseudomallei K96243 3095304 YP_112351.1 CDS BPSS2348 NC_006351.1 3165814 3166170 R Similar to Escherichia coli, and Shigella flexneri arsenate reductase ArsC or ArsG SWALL:ARSC_ECOLI (SWALL:P37311) (141 aa) fasta scores: E(): 7.5e-12, 41.07% id in 112 aa, and to Vibrio cholerae arsenate reductase vc2165 SWALL:Q9KQ39 (EMBL:AE004288) (116 aa) fasta scores: E(): 2.3e-17, 53.98% id in 113 aa. CDS is truncated at the C-terminus in comparison to some orthologues; arsenate reductase complement(3165814..3166170) Burkholderia pseudomallei K96243 3095275 YP_112352.1 CDS BPSS2349 NC_006351.1 3166744 3167406 D Similar to Ralstonia solanacearum probable partition protein rsp0003 or rs01975 SWALL:Q8XTV1 (EMBL:AL646076) (222 aa) fasta scores: E(): 8.1e-26, 38.18% id in 220 aa, and to Chlorobium limicola hypothetical protein Hyp7H SWALL:P94650 (EMBL:U77780) (209 aa) fasta scores: E(): 1.4e-19, 34.43% id in 212 aa; partition protein ParA 3166744..3167406 Burkholderia pseudomallei K96243 3095276 YP_112353.1 CDS BPSS2350 NC_006351.1 3167431 3168498 D C-terminal region is similar to the C-terminal region of Ralstonia solanacearum partitioning protein rsp0004 or rs01976 SWALL:Q8XTV0 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.6e-19, 31.06% id in 264 aa, and to the full length Bacillus subtilis stage 0 sporulation protein J Spo0J SWALL:SP0J_BACSU (SWALL:P26497) (282 aa) fasta scores: E(): 4.4e-06, 24.35% id in 271 aa; partitioning protein ParB 3167431..3168498 Burkholderia pseudomallei K96243 3095380 YP_112354.1 CDS BPSS2351 NC_006351.1 3168589 3170031 R Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa; replication protein complement(3168589..3170031) Burkholderia pseudomallei K96243 3095381 BPSLt01 tRNA BPSLt01 NC_006350.1 127411 127486 R tRNA-Lys complement(127411..127486) Burkholderia pseudomallei K96243 3112980 BPSLt02 tRNA BPSLt02 NC_006350.1 145379 145454 D tRNA-Phe 145379..145454 Burkholderia pseudomallei K96243 3112986 BPSLt03 tRNA BPSLt03 NC_006350.1 575128 575204 R tRNA-Gln complement(575128..575204) Burkholderia pseudomallei K96243 3112981 BPSLt04 tRNA BPSLt04 NC_006350.1 898612 898688 R tRNA-Met complement(898612..898688) Burkholderia pseudomallei K96243 3112931 BPSLt05 tRNA BPSLt05 NC_006350.1 1112294 1112378 R tRNA-Leu complement(1112294..1112378) Burkholderia pseudomallei K96243 3112976 BPSLt06 tRNA BPSLt06 NC_006350.1 1225785 1225859 R tRNA-Arg complement(1225785..1225859) Burkholderia pseudomallei K96243 3112948 BPSLt07 tRNA BPSLt07 NC_006350.1 1396551 1396635 D tRNA-Leu 1396551..1396635 Burkholderia pseudomallei K96243 3112947 BPSLt08 tRNA BPSLt08 NC_006350.1 1433364 1433440 D tRNA-Ile 1433364..1433440 Burkholderia pseudomallei K96243 3112952 BPSLt09 tRNA BPSLt09 NC_006350.1 1433475 1433550 D tRNA-Ala 1433475..1433550 Burkholderia pseudomallei K96243 3112975 BPSLt10 tRNA BPSLt10 NC_006350.1 1604043 1604119 R tRNA-Pro complement(1604043..1604119) Burkholderia pseudomallei K96243 3112954 BPSLt11 tRNA BPSLt11 NC_006350.1 1614340 1614416 D tRNA-Arg 1614340..1614416 Burkholderia pseudomallei K96243 3112971 BPSLt12 tRNA BPSLt12 NC_006350.1 1637007 1637082 D tRNA-Val 1637007..1637082 Burkholderia pseudomallei K96243 3112949 BPSLt13 tRNA BPSLt13 NC_006350.1 1640584 1640660 D tRNA-Asp 1640584..1640660 Burkholderia pseudomallei K96243 3112927 BPSLt14 tRNA BPSLt14 NC_006350.1 2207918 2207993 D tRNA-His 2207918..2207993 Burkholderia pseudomallei K96243 3112973 BPSLt15 tRNA BPSLt15 NC_006350.1 2216305 2216381 D tRNA-Met 2216305..2216381 Burkholderia pseudomallei K96243 3112983 BPSLt16 tRNA BPSLt16 NC_006350.1 2230084 2230170 D tRNA-Leu 2230084..2230170 Burkholderia pseudomallei K96243 3112985 BPSLt17 tRNA BPSLt17 NC_006350.1 2230328 2230414 D tRNA-Leu 2230328..2230414 Burkholderia pseudomallei K96243 3112926 BPSLt18 tRNA BPSLt18 NC_006350.1 2304349 2304425 D tRNA-Pro 2304349..2304425 Burkholderia pseudomallei K96243 3112959 BPSLt19 tRNA BPSLt19 NC_006350.1 2316919 2316995 R tRNA-Val complement(2316919..2316995) Burkholderia pseudomallei K96243 3112964 BPSLt20 tRNA BPSLt20 NC_006350.1 2509436 2509522 R tRNA-Leu complement(2509436..2509522) Burkholderia pseudomallei K96243 3112953 BPSLt21 tRNA BPSLt21 NC_006350.1 2636211 2636287 R tRNA-Asp complement(2636211..2636287) Burkholderia pseudomallei K96243 3112937 BPSLt22 tRNA BPSLt22 NC_006350.1 2636369 2636444 R tRNA-Glu complement(2636369..2636444) Burkholderia pseudomallei K96243 3112932 BPSLt23 tRNA BPSLt23 NC_006350.1 2636509 2636585 R tRNA-Asp complement(2636509..2636585) Burkholderia pseudomallei K96243 3112969 BPSLt24 tRNA BPSLt24 NC_006350.1 2636663 2636738 R tRNA-Glu complement(2636663..2636738) Burkholderia pseudomallei K96243 3112984 BPSLt25 tRNA BPSLt25 NC_006350.1 2636889 2636964 R tRNA-Ala complement(2636889..2636964) Burkholderia pseudomallei K96243 3112924 BPSLt26 tRNA BPSLt26 NC_006350.1 2700186 2700279 R tRNA-Ser complement(2700186..2700279) Burkholderia pseudomallei K96243 3112961 BPSLt27 tRNA BPSLt27 NC_006350.1 2782686 2782762 R tRNA-Met complement(2782686..2782762) Burkholderia pseudomallei K96243 3112920 BPSLt28 tRNA BPSLt28 NC_006350.1 2818426 2818500 D tRNA-Val 2818426..2818500 Burkholderia pseudomallei K96243 3112925 BPSLt29 tRNA BPSLt29 NC_006350.1 2922776 2922849 R tRNA-Cys complement(2922776..2922849) Burkholderia pseudomallei K96243 3112930 BPSLt30 tRNA BPSLt30 NC_006350.1 2922964 2923039 R tRNA-Gly complement(2922964..2923039) Burkholderia pseudomallei K96243 3112928 BPSLt31 tRNA BPSLt31 NC_006350.1 2923099 2923174 R tRNA-Gly complement(2923099..2923174) Burkholderia pseudomallei K96243 3112960 BPSLt32 tRNA BPSLt32 NC_006350.1 2970119 2970194 D tRNA-Asn 2970119..2970194 Burkholderia pseudomallei K96243 3112921 BPSLt33 tRNA BPSLt33 NC_006350.1 2970284 2970359 D tRNA-Asn 2970284..2970359 Burkholderia pseudomallei K96243 3112929 BPSLt34 tRNA BPSLt34 NC_006350.1 3076047 3076122 D tRNA-Thr 3076047..3076122 Burkholderia pseudomallei K96243 3112967 BPSLt35 tRNA BPSLt35 NC_006350.1 3089651 3089727 D tRNA-Arg 3089651..3089727 Burkholderia pseudomallei K96243 3112942 BPSLt36 tRNA BPSLt36 NC_006350.1 3089788 3089864 D tRNA-Arg 3089788..3089864 Burkholderia pseudomallei K96243 3112939 BPSLt37 tRNA BPSLt37 NC_006350.1 3097245 3097332 D tRNA-Ser 3097245..3097332 Burkholderia pseudomallei K96243 3112957 BPSLt38 tRNA BPSLt38 NC_006350.1 3119112 3119202 R tRNA-Ser complement(3119112..3119202) Burkholderia pseudomallei K96243 3112934 BPSLt39 tRNA BPSLt39 NC_006350.1 3166075 3166149 D tRNA-Gly 3166075..3166149 Burkholderia pseudomallei K96243 3112979 BPSLt40 tRNA BPSLt40 NC_006350.1 3305048 3305123 D tRNA-Lys 3305048..3305123 Burkholderia pseudomallei K96243 3112936 BPSLt41 tRNA BPSLt41 NC_006350.1 3583348 3583424 D tRNA-Pro 3583348..3583424 Burkholderia pseudomallei K96243 3112962 BPSLt42 tRNA BPSLt42 NC_006350.1 3627107 3627182 R tRNA-Ala complement(3627107..3627182) Burkholderia pseudomallei K96243 3112988 BPSLt43 tRNA BPSLt43 NC_006350.1 3627217 3627293 R tRNA-Ile complement(3627217..3627293) Burkholderia pseudomallei K96243 3112935 BPSLt44 tRNA BPSLt44 NC_006350.1 3724860 3724935 R tRNA-Thr complement(3724860..3724935) Burkholderia pseudomallei K96243 3112941 BPSLt45 tRNA BPSLt45 NC_006350.1 3828409 3828484 R tRNA-Trp complement(3828409..3828484) Burkholderia pseudomallei K96243 3112933 BPSLt46 tRNA BPSLt46 NC_006350.1 3829797 3829871 R tRNA-Thr complement(3829797..3829871) Burkholderia pseudomallei K96243 3112955 BPSLt47 tRNA BPSLt47 NC_006350.1 3829896 3829969 R tRNA-Gly complement(3829896..3829969) Burkholderia pseudomallei K96243 3112978 BPSLt48 tRNA BPSLt48 NC_006350.1 3830013 3830098 R tRNA-Tyr complement(3830013..3830098) Burkholderia pseudomallei K96243 3112965 BPSLt49 tRNA BPSLt49 NC_006350.1 3834418 3834493 R tRNA-Ala complement(3834418..3834493) Burkholderia pseudomallei K96243 3112946 BPSLt50 tRNA BPSLt50 NC_006350.1 3834528 3834604 R tRNA-Ile complement(3834528..3834604) Burkholderia pseudomallei K96243 3112974 BPSLt51 tRNA BPSLt51 NC_006350.1 3888175 3888250 R tRNA-Ala complement(3888175..3888250) Burkholderia pseudomallei K96243 3112982 BPSLt52 tRNA BPSLt52 NC_006350.1 3964326 3964396 R tRNA-Ser complement(3964326..3964396) Burkholderia pseudomallei K96243 3112970 BPSLt53 tRNA BPSLt53 NC_006350.1 3975873 3975948 R tRNA-Arg complement(3975873..3975948) Burkholderia pseudomallei K96243 3112945 BPSSt01 tRNA BPSSt01 NC_006351.1 486946 487022 D tRNA-Ile 486946..487022 Burkholderia pseudomallei K96243 3112994 BPSSt02 tRNA BPSSt02 NC_006351.1 487057 487132 D tRNA-Ala 487057..487132 Burkholderia pseudomallei K96243 3112998 BPSSt03 tRNA BPSSt03 NC_006351.1 518898 518987 D tRNA-Ser 518898..518987 Burkholderia pseudomallei K96243 3112999 BPSSt04 tRNA BPSSt04 NC_006351.1 1040382 1040466 R tRNA-Leu complement(1040382..1040466) Burkholderia pseudomallei K96243 3113000 BPSSt05 tRNA BPSSt05 NC_006351.1 1324168 1324241 D tRNA-Cys 1324168..1324241 Burkholderia pseudomallei K96243 3112989 BPSSt06 tRNA BPSSt06 NC_006351.1 2282349 2282443 R tRNA-Sec complement(2282349..2282443) Burkholderia pseudomallei K96243 3112991 BPSSt07 tRNA BPSSt07 NC_006351.1 2406685 2406760 R tRNA-Met complement(2406685..2406760) Burkholderia pseudomallei K96243 3112993 BPSSt08 tRNA BPSSt08 NC_006351.1 2727212 2727288 R tRNA-Val complement(2727212..2727288) Burkholderia pseudomallei K96243 3112990 BPSLr01 rRNA BPSLr01 NC_006350.1 1431768 1433301 D 16S ribosomal RNA 1431768..1433301 Burkholderia pseudomallei K96243 3112923 BPSLr02 rRNA BPSLr02 NC_006350.1 1433904 1436785 D 23S ribosomal RNA 1433904..1436785 Burkholderia pseudomallei K96243 3112950 BPSLr03 rRNA BPSLr03 NC_006350.1 1436967 1437084 D 5S ribosomal RNA 1436967..1437084 Burkholderia pseudomallei K96243 3112922 BPSLr04 rRNA BPSLr04 NC_006350.1 3623574 3623691 R 5S ribosomal RNA complement(3623574..3623691) Burkholderia pseudomallei K96243 3112987 BPSLr05 rRNA BPSLr05 NC_006350.1 3623873 3626754 R 23S ribosomal RNA complement(3623873..3626754) Burkholderia pseudomallei K96243 3112951 BPSLr06 rRNA BPSLr06 NC_006350.1 3627356 3628889 R 16S ribosomal RNA complement(3627356..3628889) Burkholderia pseudomallei K96243 3112977 BPSLr07 rRNA BPSLr07 NC_006350.1 3830885 3831002 R 5S ribosomal RNA complement(3830885..3831002) Burkholderia pseudomallei K96243 3112966 BPSLr08 rRNA BPSLr08 NC_006350.1 3831184 3834065 R 23S ribosomal RNA complement(3831184..3834065) Burkholderia pseudomallei K96243 3112968 BPSLr09 rRNA BPSLr09 NC_006350.1 3834667 3836200 R 16S ribosomal RNA complement(3834667..3836200) Burkholderia pseudomallei K96243 3112958 BPSSr01 rRNA BPSSr01 NC_006351.1 485360 486852 D 16S ribosomal RNA 485360..486852 Burkholderia pseudomallei K96243 3112995 BPSSr02 rRNA BPSSr02 NC_006351.1 487486 490367 D 23S ribosomal RNA 487486..490367 Burkholderia pseudomallei K96243 3112997 BPSSr03 rRNA BPSSr03 NC_006351.1 490549 490664 D 5S ribosomal RNA 490549..490664 Burkholderia pseudomallei K96243 3112992