-- dump date 20111121_011008 -- class Genbank::CDS -- table cds_note -- id note YP_002571940.1 KEGG: csc:Csac_0001 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_002571942.1 KEGG: csc:Csac_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_002571943.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: csc:Csac_0003 DNA replication and repair protein RecF YP_002571944.1 KEGG: csc:Csac_0004 hypothetical protein YP_002571945.1 KEGG: csc:Csac_0005 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_002571947.1 KEGG: csc:Csac_0006 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_002571948.1 KEGG: csc:Csac_0007 secreted protein YP_002571951.1 KEGG: mba:Mbar_A3399 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: von Willebrand factor type A; S-layer domain protein; Fibronectin type III domain protein; SH3 type 3 domain protein; YD repeat-containing protein; SMART: von Willebrand factor type A; SH3 domain protein; Fibronectin type III domain protein YP_002571952.1 KEGG: cpf:CPF_2242 sensor histidine kinase YP_002571957.1 KEGG: csc:Csac_0028 hypothetical protein YP_002571959.1 KEGG: ckl:CKL_1765 hypothetical protein; TIGRFAM: LexA repressor; PFAM: peptidase S24 and S26 domain protein; UvrD/REP helicase YP_002571960.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: nth:Nther_2133 1-Cys peroxiredoxin, 3-Cys thioredoxin peroxidase YP_002571961.1 PFAM: protein of unknown function DUF820; KEGG: tpd:Teth39_2031 hypothetical protein YP_002571962.1 TIGRFAM: prevent-host-death family protein; KEGG: tex:Teth514_0118 prevent-host-death family protein YP_002571963.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: csc:Csac_2256 PilT domain-containing protein YP_002571965.1 KEGG: fnu:FN1701 ABC transporter ATP-binding protein YP_002571966.1 catalyzes the formation of L-tryptophan from indole and L-serine YP_002571967.1 PFAM: KWG Leptospira repeat protein; KEGG: csc:Csac_0032 hypothetical protein YP_002571968.1 PFAM: LemA family protein; KEGG: csc:Csac_0033 LemA family protein YP_002571969.1 PFAM: protein of unknown function DUF477; KEGG: csc:Csac_2589 hypothetical protein YP_002571970.1 KEGG: cth:Cthe_2451 SNF2-related protein; PFAM: SNF2-related protein; zinc finger SWIM domain protein; SNF2 helicase associated domain protein ; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase domain protein YP_002571971.1 PFAM: protein of unknown function DUF820; KEGG: csc:Csac_2581 hypothetical protein YP_002571972.1 TIGRFAM: proton-coupled thiamine transporter YuaJ; KEGG: csc:Csac_2579 putative proton-coupled thiamine transporter YuaJ YP_002571973.1 KEGG: csc:Csac_0698 hypothetical protein YP_002571974.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0699 ABC transporter related YP_002571975.1 PFAM: ABC-2 type transporter; KEGG: csc:Csac_0700 ABC-2 type transporter YP_002571976.1 KEGG: csc:Csac_0701 hypothetical protein YP_002571977.1 PFAM: ATPase associated with various cellular activities AAA_3; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: csc:Csac_0702 ATPase YP_002571978.1 KEGG: csc:Csac_0703 hypothetical protein YP_002571979.1 SMART: von Willebrand factor type A; KEGG: csc:Csac_0704 hypothetical protein YP_002571980.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: csc:Csac_0705 von Willebrand factor, type A YP_002571981.1 KEGG: csc:Csac_2578 adenylosuccinate synthase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_002571982.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_2577 ABC transporter, transmembrane region YP_002571983.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_2576 ABC transporter related YP_002571984.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: csc:Csac_2575 hypothetical protein YP_002571985.1 KEGG: csc:Csac_2574 Zn-dependent hydrolase of the beta-lactamase fold-like protein YP_002571986.1 PFAM: O-antigen polymerase; SMART: Tetratricopeptide domain protein; KEGG: csc:Csac_2573 O-antigen polymerase YP_002571987.1 PFAM: ABC-2 type transporter; KEGG: apl:APL_1463 putative ABC-transporter YP_002571988.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: apl:APL_1464 ABC transporter integral membrane subunit YP_002571989.1 PFAM: Nucleotidyl transferase; KEGG: dth:DICTH_0148 glucose-1-phosphate thymidylyltransferase YP_002571990.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: mta:Moth_0165 dTDP-4-dehydrorhamnose 3,5-epimerase related YP_002571991.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: mth:MTH1789 dTDP-glucose 4,6-dehydratase YP_002571992.1 TIGRFAM: methyltransferase FkbM family; PFAM: glycosyl transferase family 2; KEGG: mma:MM_2213 putative glycosyltransferase YP_002571993.1 PFAM: glycosyl transferase group 1; KEGG: amr:AM1_0384 glycosyl transferase, group 1 family protein YP_002571994.1 PFAM: glycosyl transferase family 2; KEGG: msi:Msm_1329 glycosyl transferase YP_002571995.1 KEGG: tpd:Teth39_1626 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase YP_002571996.1 PFAM: glycosyl transferase family 2; KEGG: cbe:Cbei_4758 glycosyl transferase, family 2 YP_002571997.1 KEGG: csc:Csac_2566 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002571998.1 KEGG: csc:Csac_2564 hypothetical protein YP_002571999.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: csc:Csac_2563 appr-1-p processing domain-containing protein YP_002572000.1 KEGG: csc:Csac_0641 hypothetical protein YP_002572003.1 PFAM: Abortive infection protein; KEGG: csc:Csac_2433 abortive infection protein YP_002572008.1 PFAM: Abortive infection protein; KEGG: bce:BC4565 CAAX amino protease YP_002572009.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: csc:Csac_0831 transposase, putative YP_002572010.1 PFAM: S-layer domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: drm:Dred_2357 S-layer domain-containing protein YP_002572011.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002572012.1 KEGG: csc:Csac_2560 hypothetical protein YP_002572013.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: csc:Csac_2559 two component transcriptional regulator YP_002572014.1 KEGG: csc:Csac_2558 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_002572015.1 KEGG: csc:Csac_2557 hypothetical protein YP_002572016.1 KEGG: csc:Csac_2556 hypothetical protein YP_002572017.1 KEGG: csc:Csac_2555 hypothetical protein YP_002572018.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2554 binding-protein-dependent transport systems inner membrane component YP_002572019.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2553 binding-protein-dependent transport systems inner membrane component YP_002572020.1 KEGG: csc:Csac_2552 extracellular solute-binding protein YP_002572022.1 PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; KEGG: dth:DICTH_1968 endo-1,4-beta-xylanase A YP_002572024.1 KEGG: csc:Csac_2160 hypothetical protein YP_002572025.1 PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2212 hypothetical protein YP_002572026.1 KEGG: csc:Csac_2450 hypothetical protein YP_002572027.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: csc:Csac_2536 helix-turn-helix domain-containing protein YP_002572028.1 PFAM: protein of unknown function DUF955; KEGG: csc:Csac_2536 helix-turn-helix domain-containing protein YP_002572029.1 KEGG: csc:Csac_2538 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_002572030.1 PFAM: glycoside hydrolase family 30; KEGG: csc:Csac_2513 glucosylceramidase YP_002572031.1 PFAM: protein of unknown function DUF72; KEGG: csc:Csac_2512 hypothetical protein YP_002572032.1 KEGG: csc:Csac_2510 monosaccharide-transporting ATPase YP_002572033.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: csc:Csac_2509 response regulator receiver protein YP_002572034.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_2508 signal transduction histidine kinase, LytS YP_002572035.1 KEGG: csc:Csac_2507 hypothetical protein YP_002572036.1 KEGG: csc:Csac_2506 D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_002572037.1 with XylFH is part of the high affinity xylose ABC transporter YP_002572038.1 PFAM: inner-membrane translocator; KEGG: csc:Csac_2504 monosaccharide-transporting ATPase YP_002572039.1 KEGG: csc:Csac_0527 hypothetical protein YP_002572040.1 PFAM: protein of unknown function DUF214; KEGG: cbf:CLI_1307 putative ABC transporter, permease protein YP_002572041.1 KEGG: cbb:CLD_3345 hypothetical protein YP_002572042.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpf:CPF_1199 ABC transporter, ATP-binding protein YP_002572043.1 KEGG: csc:Csac_2503 ABC-type Na+ efflux pump permease component-like protein YP_002572044.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2502 ABC transporter related YP_002572045.1 KEGG: csc:Csac_2501 hypothetical protein YP_002572046.1 KEGG: csc:Csac_2500 hypothetical protein YP_002572047.1 KEGG: csc:Csac_2499 hypothetical protein YP_002572048.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2498 ABC transporter related YP_002572049.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: csc:Csac_2497 regulatory protein GntR, HTH YP_002572050.1 KEGG: csc:Csac_0848 hypothetical protein YP_002572051.1 KEGG: csc:Csac_2401 CRISPR-associated Cas family protein YP_002572052.1 TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: csc:Csac_2401 CRISPR-associated Cas family protein YP_002572053.1 TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; KEGG: csc:Csac_2400 CRISPR-associated Cst1 family protein YP_002572054.1 TIGRFAM: CRISPR-associated regulatory protein, DevR family; CRISPR-associated autoregulator DevR family; KEGG: csc:Csac_2399 CRISPR-associated autoregulator DevR family protein protein YP_002572055.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522; KEGG: csc:Csac_2398 CRISPR-associated Cas5 family protein YP_002572056.1 KEGG: csc:Csac_2397 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein YP_002572057.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: csc:Csac_2396 CRISPR-associated Cas4 family protein YP_002572058.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: csc:Csac_2395 CRISPR-associated Cas1 family protein YP_002572059.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: csc:Csac_2394 CRISPR-associated Cas2 family protein YP_002572060.1 PFAM: Integrase catalytic region; KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002572061.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002572062.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: csc:Csac_2105 IstB ATP binding domain-containing protein YP_002572063.1 KEGG: tpd:Teth39_0918 hypothetical protein YP_002572064.1 KEGG: tex:Teth514_1836 hypothetical protein YP_002572065.1 PFAM: protein of unknown function DUF324; KEGG: csc:Csac_0486 hypothetical protein YP_002572066.1 PFAM: protein of unknown function DUF324; KEGG: tpd:Teth39_0921 hypothetical protein YP_002572067.1 KEGG: tex:Teth514_1833 hypothetical protein YP_002572068.1 PFAM: protein of unknown function DUF324; KEGG: csc:Csac_0489 hypothetical protein YP_002572069.1 PFAM: band 7 protein; KEGG: cpy:Cphy_2023 band 7 protein YP_002572070.1 SMART: alpha amylase catalytic sub domain; KEGG: csc:Csac_0203 alpha amylase domain-containing protein YP_002572071.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein ArsR; regulatory protein GntR HTH; SMART: regulatory protein DeoR; KEGG: csc:Csac_2442 DeoR family transcriptional regulator YP_002572072.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: csc:Csac_2441 ribokinase-like domain-containing protein YP_002572073.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: csc:Csac_2440 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_002572074.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; KEGG: csc:Csac_2439 PTS system, fructose subfamily, IIC subunit YP_002572075.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: csc:Csac_2438 phosphotransferase system, phosphocarrier protein HPr YP_002572076.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: csc:Csac_2437 phosphoenolpyruvate-protein phosphotransferase YP_002572077.1 PFAM: Acetyl xylan esterase; peptidase S15; KEGG: csc:Csac_2436 acetyl xylan esterase YP_002572078.1 KEGG: mxa:MXAN_3266 hypothetical protein YP_002572079.1 PFAM: glycosyl transferase family 2; KEGG: hau:Haur_0761 glycosyl transferase family protein YP_002572080.1 KEGG: lic:LIC10230 hypothetical protein YP_002572081.1 PFAM: glycosyl transferase group 1; KEGG: cac:CAC2405 glycosyltransferase YP_002572082.1 PFAM: glycosyl transferase family 2; KEGG: cac:CAC2404 glycosyltransferase YP_002572084.1 KEGG: cac:CAC2403 hypothetical protein YP_002572085.1 KEGG: cth:Cthe_0307 hypothetical protein YP_002572086.1 KEGG: csc:Csac_2432 hypothetical protein YP_002572087.1 KEGG: csc:Csac_2431 hypothetical protein YP_002572088.1 PFAM: Rubrerythrin; KEGG: csc:Csac_2430 rubrerythrin YP_002572089.1 PFAM: ferric-uptake regulator; KEGG: csc:Csac_2429 ferric uptake regulator family protein YP_002572090.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: csc:Csac_2428 alpha amylase, catalytic region YP_002572091.1 PFAM: protein of unknown function DUF205; KEGG: csc:Csac_2427 hypothetical protein YP_002572092.1 PFAM: glycosyl transferase family 2; KEGG: csc:Csac_2426 glycosyl transferase family protein YP_002572093.1 KEGG: csc:Csac_2425 CopG family transcriptional regulator YP_002572094.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain YP_002572095.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: csc:Csac_2423 response regulator receiver protein YP_002572096.1 KEGG: csc:Csac_2422 O-methyltransferase-like protein YP_002572097.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: csc:Csac_2421 uroporphyrin-III C/tetrapyrrole methyltransferase YP_002572098.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: csc:Csac_2420 AbrB family transcriptional regulator YP_002572099.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2419 extracellular solute-binding protein YP_002572100.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2418 binding-protein-dependent transport systems inner membrane component YP_002572101.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2417 binding-protein-dependent transport systems inner membrane component YP_002572102.1 PFAM: NHL repeat containing protein; KEGG: csc:Csac_2416 hypothetical protein YP_002572103.1 KEGG: csc:Csac_2415 hypothetical protein YP_002572104.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2414 binding-protein-dependent transport systems inner membrane component YP_002572105.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2413 binding-protein-dependent transport systems inner membrane component YP_002572106.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein YP_002572107.1 PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; Carbohydrate-binding CenC domain protein; SMART: cellulose binding type IV; KEGG: csc:Csac_2411 carbohydrate-binding family 6 protein YP_002572108.1 KEGG: csc:Csac_2410 cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; SMART: glycoside hydrolase family 10 YP_002572109.1 PFAM: glycoside hydrolase family 39; KEGG: csc:Csac_2409 xylan 1,4-beta-xylosidase YP_002572110.1 KEGG: csc:Csac_2408 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10 YP_002572111.1 PFAM: putative esterase; phospholipase/Carboxylesterase; KEGG: csc:Csac_2407 putative esterase YP_002572112.1 PFAM: glycoside hydrolase family 39; KEGG: csc:Csac_2404 glycoside hydrolase family protein YP_002572113.1 PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2212 hypothetical protein YP_002572114.1 PFAM: Peptidase M23; G5 domain protein; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: csc:Csac_2403 peptidase M23B YP_002572115.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: csc:Csac_0100 ExsB protein YP_002572116.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: csc:Csac_0101 putative endoribonuclease L-PSP YP_002572117.1 KEGG: csc:Csac_0102 hypothetical protein YP_002572118.1 PFAM: thiamineS protein; TGS domain protein; KEGG: csc:Csac_0103 thiamineS protein YP_002572119.1 PFAM: PP-loop domain protein; KEGG: csc:Csac_0104 PP-loop domain-containing protein YP_002572120.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_0105 radical SAM domain-containing protein YP_002572121.1 SMART: Nucleotide binding protein PINc; KEGG: csc:Csac_2495 hypothetical protein YP_002572122.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: csc:Csac_2496 hypothetical protein YP_002572123.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: csc:Csac_0380 2-hydroxyglutaryl-CoA dehydratase, D-component YP_002572124.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: csc:Csac_0381 putative CoA-substrate-specific enzyme activase YP_002572125.1 PFAM: regulatory protein MarR; regulatory protein ArsR; SMART: regulatory protein MarR; KEGG: tpd:Teth39_0209 transcriptional regulator, TrmB YP_002572126.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_0551 ABC transporter related YP_002572127.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_0405 ABC transporter related YP_002572128.1 PFAM: protein of unknown function DUF296; KEGG: dth:DICTH_0698 hypothetical DNA binding protein YP_002572129.1 KEGG: dth:DICTH_0697 FldZ protein YP_002572130.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: csc:Csac_0415 methyl-accepting chemotaxis sensory transducer YP_002572131.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: csc:Csac_0416 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002572132.1 PFAM: protein of unknown function DUF1284; KEGG: csc:Csac_0108 hypothetical protein YP_002572133.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; KEGG: csc:Csac_0109 biotin--acetyl-CoA-carboxylase ligase YP_002572134.1 KEGG: csc:Csac_0110 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_002572135.1 KEGG: csc:Csac_0111 hypothetical protein YP_002572136.1 KEGG: csc:Csac_0112 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_002572137.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: csc:Csac_0113 short-chain dehydrogenase/reductase SDR YP_002572138.1 PFAM: protein of unknown function DUF820; KEGG: csc:Csac_0114 hypothetical protein YP_002572139.1 KEGG: csc:Csac_0115 hypothetical protein YP_002572140.1 PFAM: PspA/IM30 family protein; KEGG: csc:Csac_0116 phage shock protein A, PspA YP_002572141.1 KEGG: csc:Csac_0117 phosphoprotein phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_002572142.1 TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: csc:Csac_0118 SpoIID/LytB domain-containing protein YP_002572143.1 KEGG: csc:Csac_0119 hypothetical protein YP_002572144.1 KEGG: csc:Csac_0120 hypothetical protein YP_002572145.1 KEGG: csc:Csac_0121 hypothetical protein YP_002572146.1 KEGG: csc:Csac_0639 hypothetical protein YP_002572147.1 KEGG: csc:Csac_0122 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002572148.1 PFAM: protein of unknown function DUF86; KEGG: ckl:CKL_2051 hypothetical protein YP_002572149.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0123 DNA polymerase beta subunit YP_002572150.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: csc:Csac_0129 glycoside hydrolase family protein YP_002572151.1 PFAM: glycoside hydrolase 15-related; KEGG: csc:Csac_0130 glycoside hydrolase 15-related YP_002572152.1 KEGG: afl:Aflv_1215 hypothetical protein YP_002572153.1 KEGG: csc:Csac_0131 hypothetical protein YP_002572154.1 KEGG: csc:Csac_0133 hypothetical protein YP_002572155.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_0134 glycosyl transferase, group 1 YP_002572156.1 PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; KEGG: csc:Csac_0136 nucleotidyl transferase YP_002572157.1 PFAM: glycoside hydrolase family 5; KEGG: csc:Csac_0137 glycoside hydrolase family protein YP_002572158.1 KEGG: cac:CAC3001 hypothetical protein YP_002572159.1 KEGG: ckl:CKL_2712 hypothetical protein YP_002572160.1 KEGG: cac:CAC2999 hypothetical protein YP_002572161.1 PFAM: VanZ family protein; KEGG: csc:Csac_0138 VanZ family protein YP_002572162.1 KEGG: csc:Csac_0148 hypothetical protein YP_002572163.1 PFAM: cation transporter; KEGG: csc:Csac_0149 cation transporter YP_002572165.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: csc:Csac_0150 TrkA domain-containing protein YP_002572166.1 PFAM: TrkA-N domain protein; KEGG: csc:Csac_0151 TrkA domain-containing protein YP_002572167.1 TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: csc:Csac_0152 SpoIID/LytB domain-containing protein YP_002572168.1 TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: csc:Csac_0153 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase YP_002572169.1 KEGG: csc:Csac_0154 hypothetical protein YP_002572170.1 KEGG: tex:Teth514_2248 hypothetical protein YP_002572171.1 KEGG: tpd:Teth39_1566 hypothetical protein YP_002572172.1 KEGG: csc:Csac_0156 chromosome segregation ATPase-like protein YP_002572173.1 KEGG: csc:Csac_0157 hypothetical protein YP_002572174.1 KEGG: csc:Csac_0158 ABC-type bacteriocin transporter; TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase YP_002572175.1 PFAM: secretion protein HlyD family protein; KEGG: cbl:CLK_3683 putative bacteriocin ABC transporter, bacteriocin-binding protein YP_002572178.1 PFAM: Abortive infection protein; KEGG: csc:Csac_0166 abortive infection protein YP_002572179.1 KEGG: csc:Csac_0656 hypothetical protein YP_002572180.1 KEGG: csc:Csac_0168 hypothetical protein YP_002572181.1 PFAM: Integrase catalytic region; KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002572182.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002572185.1 KEGG: csc:Csac_0168 hypothetical protein YP_002572186.1 KEGG: csc:Csac_0169 hypothetical protein YP_002572187.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: csc:Csac_0170 hypothetical protein YP_002572189.1 KEGG: mbu:Mbur_1109 hypothetical protein YP_002572190.1 KEGG: mbu:Mbur_1109 hypothetical protein YP_002572193.1 PFAM: PilT protein domain protein; KEGG: ava:Ava_3324 PilT protein-like YP_002572194.1 PFAM: periplasmic binding protein; KEGG: mta:Moth_1466 periplasmic binding protein YP_002572195.1 PFAM: transport system permease protein; KEGG: csc:Csac_0174 transport system permease protein YP_002572196.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0175 ABC transporter related YP_002572197.1 PFAM: protein of unknown function UPF0066; KEGG: csc:Csac_0176 hypothetical protein YP_002572198.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: csc:Csac_0177 formylmethanofuran dehydrogenase, subunit E region YP_002572199.1 KEGG: csc:Csac_0178 hypothetical protein YP_002572200.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mta:Moth_1477 periplasmic sensor signal transduction histidine kinase YP_002572201.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mta:Moth_1478 two component transcriptional regulator YP_002572202.1 KEGG: rpc:RPC_3687 hypothetical protein YP_002572206.1 KEGG: csc:Csac_0168 hypothetical protein YP_002572207.1 KEGG: csc:Csac_0169 hypothetical protein YP_002572208.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: csc:Csac_0170 hypothetical protein YP_002572209.1 KEGG: csc:Csac_0168 hypothetical protein YP_002572210.1 KEGG: csc:Csac_0169 hypothetical protein YP_002572211.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: csc:Csac_0170 hypothetical protein YP_002572212.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: csc:Csac_0177 formylmethanofuran dehydrogenase, subunit E region YP_002572213.1 KEGG: csc:Csac_0178 hypothetical protein YP_002572214.1 KEGG: csc:Csac_0179 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver YP_002572215.1 KEGG: csc:Csac_0180 hypothetical protein YP_002572216.1 KEGG: csc:Csac_0181 hypothetical protein YP_002572217.1 KEGG: csc:Csac_0182 hypothetical protein YP_002572218.1 catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate YP_002572219.1 KEGG: csc:Csac_0184 hypothetical protein YP_002572220.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; KEGG: csc:Csac_0185 methionyl-tRNA synthetase YP_002572221.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: csc:Csac_0186 TatD family hydrolase YP_002572222.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_0187 radical SAM domain-containing protein YP_002572223.1 PFAM: SMC domain protein; KEGG: cts:Ctha_1777 ATPase-like protein YP_002572224.1 KEGG: cts:Ctha_2268 hypothetical protein YP_002572225.1 PFAM: LmbE family protein; KEGG: csc:Csac_0190 LmbE family protein YP_002572226.1 PFAM: protein of unknown function DUF151; KEGG: csc:Csac_0191 hypothetical protein YP_002572227.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0192 heavy metal translocating P-type ATPase YP_002572228.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: csc:Csac_0193 regulatory protein, ArsR YP_002572229.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_0194 glycosyl transferase, group 1 YP_002572230.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0195 HAD family hydrolase YP_002572231.1 PFAM: protein of unknown function DUF159; KEGG: csc:Csac_0196 hypothetical protein YP_002572232.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_002572233.1 PFAM: conserved hypothetical protein; KEGG: csc:Csac_1160 hypothetical protein YP_002572234.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: csc:Csac_1161 CofD YP_002572235.1 PFAM: protein of unknown function DUF199; KEGG: csc:Csac_1162 hypothetical protein YP_002572236.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: csc:Csac_1163 phosphotransferase system, phosphocarrier protein HPr YP_002572237.1 PFAM: homocysteine S-methyltransferase; KEGG: csc:Csac_1164 homocysteine S-methyltransferase YP_002572238.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions YP_002572239.1 KEGG: csc:Csac_2323 transposase, IS4 family protein YP_002572240.1 KEGG: csc:Csac_0158 ABC-type bacteriocin transporter; TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase YP_002572241.1 KEGG: cbf:CLI_A0023 putative bacteriocin ABC transporter, bacteriocin-binding protein YP_002572242.1 KEGG: csc:Csac_0165 hypothetical protein YP_002572244.1 PFAM: Abortive infection protein; KEGG: csc:Csac_0162 abortive infection protein YP_002572246.1 PFAM: SMC domain protein; KEGG: mar:MAE_31500 ATPase YP_002572248.1 KEGG: csc:Csac_1167 hypothetical protein YP_002572249.1 PFAM: UvrD/REP helicase; KEGG: csc:Csac_1168 UvrD/REP helicase YP_002572250.1 KEGG: csc:Csac_1169 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002572251.1 PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1170 major facilitator transporter YP_002572252.1 KEGG: csc:Csac_1171 alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_002572253.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: csc:Csac_1172 oxidoreductase domain-containing protein YP_002572254.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: csc:Csac_1173 xylose isomerase domain-containing protein YP_002572255.1 PFAM: YD repeat-containing protein; KEGG: csc:Csac_1174 YD repeat-containing protein YP_002572256.1 KEGG: bwe:BcerKBAB4_5578 hypothetical protein YP_002572257.1 KEGG: gbe:GbCGDNIH1_1663 hemolysin YP_002572259.1 KEGG: hypothetical protein YP_002572260.1 KEGG: oih:OB3366 hypothetical protein YP_002572261.1 KEGG: bwe:BcerKBAB4_5578 hypothetical protein YP_002572262.1 KEGG: gbe:GbCGDNIH1_1663 hemolysin YP_002572266.1 KEGG: rso:RS05537 putative rhs-related protein YP_002572267.1 KEGG: csc:Csac_1176 hypothetical protein YP_002572268.1 PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: csc:Csac_1181 hypothetical protein YP_002572269.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: csc:Csac_1182 radical SAM domain-containing protein YP_002572270.1 PFAM: protein of unknown function DUF147; KEGG: csc:Csac_1183 hypothetical protein YP_002572271.1 PFAM: YbbR family protein; KEGG: csc:Csac_1184 YbbR family protein YP_002572272.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_002572273.1 TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein; KEGG: csc:Csac_1186 HPr kinase YP_002572274.1 KEGG: csc:Csac_0248 hypothetical protein YP_002572275.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: swo:Swol_1390 transcriptional regulator, GntR family YP_002572276.1 KEGG: csc:Csac_0008 hypothetical protein YP_002572277.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: csc:Csac_0250 thiamine biosynthesis protein ThiS YP_002572278.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_002572279.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center YP_002572280.1 catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate YP_002572281.1 KEGG: csc:Csac_0254 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_002572282.1 TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: csc:Csac_0255 thiamine biosynthesis protein ThiC YP_002572283.1 KEGG: hypothetical protein YP_002572284.1 KEGG: btl:BALH_0157 hypothetical protein YP_002572286.1 KEGG: nph:NP2456A cytochrome-C-like terminal oxidase, subunit I 1 YP_002572287.1 KEGG: ctc:CTC01498 hypothetical protein YP_002572288.1 KEGG: csc:Csac_0256 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_002572289.1 KEGG: csc:Csac_0257 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase YP_002572290.1 KEGG: csc:Csac_0267 hypothetical protein YP_002572293.1 KEGG: csc:Csac_0270 hypothetical protein YP_002572294.1 PFAM: glycosyl transferase family 2; KEGG: csc:Csac_0268 ribonuclease III YP_002572295.1 PFAM: GtrA family protein; KEGG: csc:Csac_0269 GtrA family protein YP_002572296.1 KEGG: csc:Csac_0270 hypothetical protein YP_002572297.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_0271 radical SAM domain-containing protein YP_002572298.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: csc:Csac_0272 preprotein translocase, YajC subunit YP_002572299.1 KEGG: csc:Csac_0273 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase YP_002572300.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_002572301.1 KEGG: csc:Csac_0275 hypothetical protein YP_002572302.1 PFAM: Nucleotidyl transferase; KEGG: csc:Csac_0276 mannose-1-phosphate guanylyltransferase (GDP) YP_002572303.1 KEGG: csc:Csac_0277 hypothetical protein YP_002572304.1 TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0438 beta-phosphoglucomutase family hydrolase YP_002572305.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: csc:Csac_0439 kojibiose phosphorylase YP_002572306.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0440 extracellular solute-binding protein YP_002572307.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0441 binding-protein-dependent transport systems inner membrane component YP_002572308.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0442 binding-protein-dependent transport systems inner membrane component YP_002572309.1 KEGG: csc:Csac_0443 alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_002572310.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: csc:Csac_0444 kojibiose phosphorylase YP_002572311.1 KEGG: csc:Csac_2745 hypothetical protein YP_002572312.1 KEGG: cbb:CLD_2188 chromosome segregation protein SMC YP_002572313.1 KEGG: acl:ACL_1260 hypothetical protein YP_002572315.1 KEGG: dth:DICTH_0447 hypothetical protein YP_002572316.1 KEGG: cph:Cpha266_1471 hypothetical protein YP_002572317.1 KEGG: bld:BLi01315 YeeF YP_002572318.1 KEGG: vvy:VV1303 hypothetical protein YP_002572319.1 KEGG: nth:Nther_2452 hypothetical protein YP_002572320.1 PFAM: glycoside hydrolase family 65 domain protein; KEGG: csc:Csac_0444 kojibiose phosphorylase YP_002572321.1 KEGG: cth:Cthe_1503 hypothetical protein YP_002572322.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: cth:Cthe_1504 Linocin_M18 bacteriocin protein YP_002572323.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: csc:Csac_0445 rubrerythrin YP_002572324.1 KEGG: afl:Aflv_1253 hypothetical protein YP_002572327.1 PFAM: aldo/keto reductase; KEGG: csc:Csac_0446 aldo/keto reductase YP_002572328.1 KEGG: cth:Cthe_0314 glycosyltransferase 28-like protein YP_002572329.1 PFAM: protein of unknown function DUF710; KEGG: csc:Csac_0447 hypothetical protein YP_002572330.1 PFAM: metalloenzyme domain protein; KEGG: csc:Csac_0448 metalloenzyme domain-containing protein YP_002572331.1 PFAM: peptidase U32; KEGG: csc:Csac_0449 peptidase U32 YP_002572332.1 TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: csc:Csac_0450 beta tubulin, autoregulation binding site YP_002572333.1 PFAM: ferredoxin; KEGG: csc:Csac_0451 ferredoxin YP_002572334.1 PFAM: SNARE associated Golgi protein; KEGG: csc:Csac_0452 hypothetical protein YP_002572335.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: csc:Csac_0453 cell wall hydrolase/autolysin YP_002572336.1 TIGRFAM: dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: csc:Csac_0454 dipeptidase, putative YP_002572337.1 PFAM: protein of unknown function DUF204; KEGG: csc:Csac_0455 hypothetical protein YP_002572338.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: csc:Csac_0456 ECF subfamily RNA polymerase sigma-24 factor YP_002572339.1 KEGG: csc:Csac_0457 hypothetical protein YP_002572340.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: csc:Csac_0458 anti-sigma-factor antagonist YP_002572341.1 KEGG: csc:Csac_0459 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_002572342.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: csc:Csac_0460 FliA/WhiG family RNA polymerase sigma factor YP_002572343.1 PFAM: S-layer domain protein; KEGG: csc:Csac_0207 S-layer domain-containing protein YP_002572344.1 KEGG: csc:Csac_0209 hypothetical protein YP_002572345.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: csc:Csac_0210 putative 6-pyruvoyl tetrahydropterin synthase YP_002572346.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis YP_002572347.1 KEGG: csc:Csac_0212 hypothetical protein YP_002572348.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: csc:Csac_0213 amidohydrolase YP_002572349.1 PFAM: protein of unknown function UPF0079; KEGG: csc:Csac_0214 hypothetical protein YP_002572350.1 PFAM: peptidase M22 glycoprotease; KEGG: csc:Csac_0215 peptidase M22, glycoprotease YP_002572351.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_0216 ribosomal-protein-alanine acetyltransferase YP_002572352.1 KEGG: csc:Csac_0219 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_002572353.1 KEGG: csc:Csac_0671 pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002572354.1 PFAM: protein of unknown function DUF58; KEGG: csc:Csac_0672 hypothetical protein YP_002572355.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sak:SAK_0189 DNA-binding response regulator YP_002572356.1 KEGG: ana:all3465 unknown protein YP_002572357.1 PFAM: glycosyl transferase family 2; KEGG: aoe:Clos_0614 glycosyl transferase family protein YP_002572358.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: csc:Csac_0461 hemerythrin-like metal-binding protein YP_002572359.1 KEGG: csc:Csac_0462 hypothetical protein YP_002572360.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: csc:Csac_0465 RNA methyltransferase YP_002572361.1 PFAM: protein of unknown function DUF1232; KEGG: cpy:Cphy_3605 hypothetical protein YP_002572362.1 KEGG: csc:Csac_1088 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_002572363.1 KEGG: csc:Csac_1089 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_002572364.1 PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: csc:Csac_1090 glycosyltransferase 36 YP_002572365.1 PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: csc:Csac_1091 glycosyltransferase 36 YP_002572366.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_1092 glycosyl transferase, group 1 YP_002572367.1 TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: csc:Csac_1093 sugar transferase YP_002572368.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_002572369.1 KEGG: cth:Cthe_2451 SNF2-related protein; PFAM: SNF2-related protein; SNF2 helicase associated domain protein ; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein YP_002572370.1 PFAM: aldo/keto reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1115 aldo/keto reductase YP_002572371.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_1116 ABC transporter related YP_002572372.1 TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: csc:Csac_1117 CRISPR-associated Cas family protein YP_002572373.1 PFAM: glycoside hydrolase clan GH-D; KEGG: csc:Csac_1118 glycoside hydrolase, clan GH-D YP_002572374.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_1119 GCN5-related N-acetyltransferase YP_002572375.1 KEGG: csc:Csac_1120 hypothetical protein YP_002572376.1 KEGG: csc:Csac_1121 hypothetical protein YP_002572377.1 PFAM: protein of unknown function DUF541; KEGG: csc:Csac_1122 hypothetical protein YP_002572378.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: csc:Csac_1123 small GTP-binding protein YP_002572379.1 catalyzes the formation of fumarate from aspartate YP_002572380.1 KEGG: csc:Csac_1234 hypothetical protein YP_002572381.1 KEGG: csc:Csac_1136 hypothetical protein YP_002572382.1 PFAM: Rubrerythrin; KEGG: csc:Csac_1137 rubrerythrin YP_002572383.1 KEGG: csc:Csac_1473 hypothetical protein YP_002572384.1 KEGG: csc:Csac_2704 hypothetical protein YP_002572385.1 KEGG: bld:BLi01315 YeeF YP_002572386.1 KEGG: tma:TM1695 hypothetical protein YP_002572387.1 KEGG: nth:Nther_2452 hypothetical protein YP_002572389.1 KEGG: dth:DICTH_0447 hypothetical protein YP_002572392.1 KEGG: cph:Cpha266_1471 hypothetical protein YP_002572394.1 KEGG: hypothetical protein YP_002572395.1 KEGG: cpf:CPF_0775 hypothetical protein YP_002572397.1 KEGG: hypothetical protein YP_002572398.1 PFAM: amidohydrolase 2; TatD-related deoxyribonuclease; KEGG: csc:Csac_1139 amidohydrolase 2 YP_002572399.1 PFAM: beta-lactamase domain protein; KEGG: csc:Csac_1140 beta-lactamase domain-containing protein YP_002572400.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: csc:Csac_1141 short-chain dehydrogenase/reductase SDR YP_002572401.1 KEGG: csc:Csac_1142 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_002572402.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: csc:Csac_1143 acetolactate synthase, small subunit YP_002572403.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002572404.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: csc:Csac_1145 2-isopropylmalate synthase YP_002572406.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; KEGG: csc:Csac_1146 alpha-isopropylmalate/homocitrate synthase family transferase YP_002572407.1 KEGG: csc:Csac_1150 allergen V5/TPX-1 family protein; TIGRFAM: spore coat assembly protein SafA; PFAM: SCP-like extracellular; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM YP_002572408.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_0737 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002572409.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: csc:Csac_0738 tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit YP_002572410.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: csc:Csac_0739 Orn/Lys/Arg decarboxylase, major region YP_002572411.1 KEGG: csc:Csac_0740 dTMP kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase YP_002572412.1 PFAM: protein of unknown function DUF970; nitrogen regulatory protein P-II; KEGG: csc:Csac_0741 hypothetical protein YP_002572413.1 PFAM: protein of unknown function DUF327; KEGG: csc:Csac_0742 hypothetical protein YP_002572414.1 KEGG: csc:Csac_0743 DNA-directed DNA polymerase YP_002572415.1 PFAM: PSP1 domain protein; KEGG: csc:Csac_0744 PSP1 domain-containing protein YP_002572416.1 PFAM: protein of unknown function DUF195; KEGG: csc:Csac_0745 hypothetical protein YP_002572417.1 PFAM: pyruvate carboxyltransferase; KEGG: csc:Csac_0746 pyruvate carboxyltransferase YP_002572418.1 KEGG: csc:Csac_2479 hypothetical protein YP_002572419.1 KEGG: csc:Csac_2478 hypothetical protein YP_002572420.1 KEGG: csc:Csac_0569 hypothetical protein YP_002572421.1 KEGG: csc:Csac_0308 hypothetical protein YP_002572422.1 PFAM: Extracellular ligand-binding receptor; KEGG: csc:Csac_2453 extracellular ligand-binding receptor YP_002572423.1 Catalyzes the conversion of citrate to isocitrate YP_002572424.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: csc:Csac_0751 isocitrate dehydrogenase (NAD(+)) YP_002572425.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: csc:Csac_0752 GntR family transcriptional regulator YP_002572426.1 PFAM: Mur ligase middle domain protein; KEGG: csc:Csac_0753 Mur ligase middle domain-containing protein YP_002572427.1 KEGG: csc:Csac_0754 hypothetical protein YP_002572428.1 KEGG: csc:Csac_0755 hypothetical protein YP_002572429.1 KEGG: csc:Csac_0756 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_002572430.1 SMART: AAA ATPase; KEGG: csc:Csac_0757 phosphoribulokinase/uridine kinase YP_002572431.1 KEGG: csc:Csac_0758 hypothetical protein YP_002572432.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: csc:Csac_0759 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002572433.1 PFAM: SNARE associated Golgi protein; KEGG: csc:Csac_0760 uncharacterized membrane-associated protein YP_002572434.1 PFAM: 3D domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: csc:Csac_0761 3D domain-containing protein YP_002572435.1 PFAM: glycosidase PH1107-related; KEGG: csc:Csac_0762 glycosidase, PH1107-related YP_002572436.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: csc:Csac_0763 alcohol dehydrogenase YP_002572437.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: csc:Csac_0764 signal transduction histidine kinase regulating citrate/malate metabolism YP_002572438.1 KEGG: csc:Csac_0765 hypothetical protein YP_002572439.1 KEGG: csc:Csac_0766 hypothetical protein YP_002572440.1 TIGRFAM: spore coat protein, CotS family; PFAM: aminoglycoside phosphotransferase; KEGG: csc:Csac_0767 hypothetical protein YP_002572441.1 KEGG: csc:Csac_0768 hypothetical protein YP_002572442.1 TIGRFAM: spore coat protein, CotS family; KEGG: csc:Csac_0769 hypothetical protein YP_002572443.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_002572444.1 PFAM: protein of unknown function DUF74; KEGG: csc:Csac_0771 hypothetical protein YP_002572445.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_002572446.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_0773 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002572447.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_002572448.1 KEGG: ENSAPMG00000006862 YP_002572449.1 KEGG: csc:Csac_0777 hypothetical protein YP_002572450.1 KEGG: csc:Csac_0796 hypothetical protein YP_002572451.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: csc:Csac_0778 ROK family protein YP_002572452.1 PFAM: lipolytic protein G-D-S-L family; KEGG: csc:Csac_0779 GDSL family lipase YP_002572453.1 KEGG: csc:Csac_0780 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_002572454.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose YP_002572455.1 TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: csc:Csac_0782 glucose-1-phosphate adenylyltransferase, GlgD subunit YP_002572456.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: csc:Csac_0783 glucose-1-phosphate adenylyltransferase YP_002572457.1 KEGG: csc:Csac_0784 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002572458.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: csc:Csac_0787 DNA repair protein RadC YP_002572459.1 PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: csc:Csac_0788 peptidoglycan-binding LysM YP_002572460.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_002572461.1 KEGG: csc:Csac_0792 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: GTP cyclohydrolase II; 34-dihydroxy-2-butanone 4-phosphate synthase YP_002572462.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_002572463.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: csc:Csac_0794 riboflavin biosynthesis protein RibD YP_002572464.1 KEGG: csc:Csac_0796 hypothetical protein YP_002572465.1 KEGG: csc:Csac_0797 alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_002572466.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: csc:Csac_0798 xylulokinase YP_002572467.1 KEGG: csc:Csac_0799 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002572468.1 PFAM: ANTAR domain protein; KEGG: csc:Csac_0800 response regulator receiver/ANTAR domain-containing protein YP_002572469.1 PFAM: peptidase C26; KEGG: csc:Csac_0801 peptidase C26 YP_002572470.1 PFAM: MscS Mechanosensitive ion channel; KEGG: csc:Csac_0802 MscS mechanosensitive ion channel YP_002572471.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; KEGG: csc:Csac_0803 prolyl-tRNA synthetase YP_002572472.1 PFAM: cyclase family protein; KEGG: csc:Csac_0804 cyclase family protein YP_002572473.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: csc:Csac_0811 methyl-accepting chemotaxis sensory transducer YP_002572474.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: csc:Csac_0812 putative CheW protein YP_002572475.1 KEGG: csc:Csac_0813 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver YP_002572476.1 PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_0814 putative CheA signal transduction histidine kinase YP_002572477.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; KEGG: csc:Csac_0815 heat repeat-containing PBS lyase YP_002572478.1 KEGG: csc:Csac_0816 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_002572479.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: csc:Csac_0817 response regulator receiver protein YP_002572480.1 PFAM: CheW domain protein; Hpt domain protein; SMART: Hpt domain protein; CheW domain protein; KEGG: csc:Csac_0818 putative CheW protein YP_002572481.1 KEGG: csc:Csac_0819 methyl-accepting chemotaxis sensory transducer YP_002572482.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: csc:Csac_0820 response regulator receiver protein YP_002572483.1 KEGG: csc:Csac_0821 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_002572484.1 KEGG: csc:Csac_0822 phosphoribosyltransferase YP_002572485.1 KEGG: csc:Csac_0823 hypothetical protein YP_002572486.1 KEGG: csc:Csac_0824 hypothetical protein YP_002572487.1 KEGG: csc:Csac_0825 hypothetical protein YP_002572488.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: csc:Csac_0826 cation diffusion facilitator family transporter YP_002572489.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: csc:Csac_0673 CrcB protein YP_002572490.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: csc:Csac_0674 CrcB protein YP_002572491.1 KEGG: csc:Csac_0676 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_002572492.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_002572493.1 PFAM: Carbohydrate binding family 17/28; glycoside hydrolase family 5; S-layer domain protein; KEGG: csc:Csac_0678 cellulase YP_002572494.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0679 binding-protein-dependent transport systems inner membrane component YP_002572495.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0680 binding-protein-dependent transport systems inner membrane component YP_002572496.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0681 ABC-type sugar transport system periplasmic component-like protein YP_002572497.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0682 extracellular solute-binding protein YP_002572498.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: csc:Csac_0683 histidine kinase internal region YP_002572499.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: csc:Csac_0684 response regulator receiver protein YP_002572500.1 PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_0685 major facilitator transporter YP_002572501.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: csc:Csac_0686 DNA binding domain-containing protein YP_002572502.1 KEGG: tpd:Teth39_2060 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_002572503.1 KEGG: csc:Csac_0687 hypothetical protein YP_002572504.1 KEGG: csc:Csac_0688 hypothetical protein YP_002572505.1 PFAM: Ig domain protein; KEGG: dth:DICTH_0703 arabinogalactan endo-1,4-beta-galactosidase, putative YP_002572506.1 PFAM: S-layer domain protein; KEGG: cth:Cthe_1235 cellulose 1,4-beta-cellobiosidase YP_002572507.1 KEGG: csc:Csac_0689 pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: pullanase-associated protein; glycoside hydrolase starch-binding; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002572508.1 PFAM: glycoside hydrolase starch-binding; KEGG: tex:Teth514_1781 alpha amylase, catalytic region YP_002572509.1 PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: csc:Csac_0690 HhH-GPD family protein YP_002572510.1 KEGG: csc:Csac_0691 hypothetical protein YP_002572511.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0692 extracellular solute-binding protein YP_002572512.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0693 binding-protein-dependent transport systems inner membrane component YP_002572513.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0694 binding-protein-dependent transport systems inner membrane component YP_002572514.1 PFAM: ROK family protein; KEGG: csc:Csac_0695 ROK family protein YP_002572515.1 KEGG: csc:Csac_0696 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; SMART: glycoside hydrolase family 10 YP_002572516.1 catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate YP_002572517.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: csc:Csac_1188 putative hydrolase YP_002572518.1 KEGG: csc:Csac_1189 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_002572519.1 KEGG: csc:Csac_1190 hypothetical protein YP_002572520.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_1191 radical SAM domain-containing protein YP_002572521.1 KEGG: csc:Csac_1192 carbonic anhydrase YP_002572522.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_002572523.1 TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: csc:Csac_1194 protein-export membrane protein SecF YP_002572524.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: csc:Csac_1195 beta-lactamase domain-containing protein YP_002572525.1 TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: csc:Csac_1196 PRC-barrel domain-containing protein YP_002572526.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: csc:Csac_1197 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002572527.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002572528.1 PFAM: beta-lactamase domain protein; KEGG: csc:Csac_1199 beta-lactamase domain-containing protein YP_002572529.1 KEGG: csc:Csac_1200 RpiB/LacA/LacB family sugar-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase YP_002572530.1 KEGG: csc:Csac_1201 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002572531.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: csc:Csac_1202 CMP/dCMP deaminase, zinc-binding YP_002572532.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis YP_002572533.1 KEGG: csc:Csac_1204 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_002572534.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_002572535.1 KEGG: csc:Csac_1206 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase domain protein YP_002572536.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: csc:Csac_1207 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002572537.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: csc:Csac_1208 tRNA(Ile)-lysidine synthetase YP_002572538.1 KEGG: csc:Csac_1209 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002572539.1 KEGG: csc:Csac_1210 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_002572540.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: csc:Csac_1211 glutamine synthetase, type I YP_002572541.1 TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_0372 sulfide dehydrogenase (flavoprotein) subunit SudA YP_002572542.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cth:Cthe_0373 ferredoxin--NADP(+) reductase subunit alpha YP_002572543.1 KEGG: csc:Csac_1212 hypothetical protein YP_002572544.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: csc:Csac_1213 MazG family protein YP_002572545.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: csc:Csac_1214 histone family protein DNA-binding protein YP_002572546.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: csc:Csac_1215 RNA-binding S4 domain-containing protein YP_002572547.1 PFAM: YabP family protein; KEGG: csc:Csac_1216 YabP family protein YP_002572548.1 KEGG: csc:Csac_1217 hypothetical protein YP_002572549.1 PFAM: Septum formation initiator; KEGG: csc:Csac_1218 septum formation initiator YP_002572550.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: csc:Csac_1219 RNA-binding S1 domain-containing protein YP_002572551.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002572552.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_002572553.1 PFAM: MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: csc:Csac_1222 MgtE intracellular region YP_002572554.1 PFAM: natural resistance-associated macrophage protein; KEGG: csc:Csac_1223 natural resistance-associated macrophage protein YP_002572555.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: csc:Csac_0827 transcription elongation factor GreA YP_002572556.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: csc:Csac_0828 lysyl-tRNA synthetase YP_002572557.1 KEGG: csc:Csac_0829 hypothetical protein YP_002572558.1 KEGG: csc:Csac_0832 hypothetical protein YP_002572559.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: csc:Csac_0833 putative CoA-substrate-specific enzyme activase YP_002572560.1 KEGG: csc:Csac_0834 peptidase M42 family protein YP_002572561.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_002572562.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002572563.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: csc:Csac_0837 acetolactate synthase, large subunit, biosynthetic type YP_002572564.1 KEGG: csc:Csac_0852 hypothetical protein YP_002572566.1 KEGG: cbe:Cbei_0281 hypothetical protein YP_002572567.1 KEGG: ENSAPMG00000012446. YP_002572568.1 KEGG: ENSAPMG00000011324. YP_002572569.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbe:Cbei_0283 ABC transporter related YP_002572570.1 KEGG: cbe:Cbei_0284 hypothetical protein YP_002572571.1 PFAM: glycosidase PH1107-related; KEGG: csc:Csac_0853 glycosidase, PH1107-related YP_002572572.1 PFAM: protein of unknown function UPF0047; KEGG: csc:Csac_0854 hypothetical protein YP_002572574.1 KEGG: csc:Csac_1518 hypothetical protein YP_002572575.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_002572576.1 KEGG: csc:Csac_0858 hypothetical protein YP_002572577.1 KEGG: csc:Csac_0859 hypothetical protein YP_002572578.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: csc:Csac_0860 single-stranded-DNA-specific exonuclease RecJ YP_002572579.1 PFAM: protein of unknown function DUF107; KEGG: csc:Csac_0861 hypothetical protein YP_002572580.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: csc:Csac_0862 band 7 protein YP_002572581.1 PFAM: protein of unknown function DUF964; KEGG: csc:Csac_0863 hypothetical protein YP_002572582.1 PFAM: protein of unknown function UPF0182; KEGG: csc:Csac_0864 hypothetical protein YP_002572583.1 PFAM: class II aldolase/adducin family protein; KEGG: csc:Csac_0865 class II aldolase/adducin family protein YP_002572584.1 PFAM: class II aldolase/adducin family protein; KEGG: csc:Csac_0866 class II aldolase/adducin family protein YP_002572585.1 KEGG: csc:Csac_0867 hypothetical protein YP_002572586.1 catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate YP_002572587.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: csc:Csac_0869 alcohol dehydrogenase YP_002572588.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: csc:Csac_0870 lipoate-protein ligase B YP_002572589.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002572590.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: csc:Csac_0872 dehydrogenase catalytic domain-containing protein YP_002572591.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: csc:Csac_0873 dihydrolipoamide dehydrogenase YP_002572592.1 PFAM: Transketolase central region; dehydrogenase E1 component; Transketolase domain protein; KEGG: csc:Csac_0874 transketolase, central region YP_002572593.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: csc:Csac_0875 DeoR family transcriptional regulator YP_002572594.1 catalyzes the formation of L-rhamnulose from L-rhamnose YP_002572595.1 KEGG: csc:Csac_0877 L-fucose isomerase-like protein YP_002572596.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_002572597.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_002572598.1 binds and unfolds substrates as part of the ClpXP protease YP_002572599.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_002572600.1 KEGG: csc:Csac_0882 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_002572601.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: csc:Csac_0883 RpoD family RNA polymerase sigma factor YP_002572602.1 KEGG: csc:Csac_0884 hypothetical protein YP_002572603.1 KEGG: csc:Csac_0885 hypothetical protein YP_002572604.1 KEGG: csc:Csac_0886 hypothetical protein YP_002572605.1 KEGG: csc:Csac_0887 hypothetical protein YP_002572606.1 PFAM: KWG Leptospira repeat protein; KEGG: cno:NT01CX_1069 hypothetical protein YP_002572608.1 PFAM: KWG Leptospira repeat protein; KEGG: cbl:CLK_1129 hypothetical protein YP_002572609.1 PFAM: KWG Leptospira repeat protein; KEGG: csc:Csac_0643 hypothetical protein YP_002572610.1 PFAM: KWG Leptospira repeat protein; KEGG: ter:Tery_2057 hypothetical protein YP_002572611.1 PFAM: KWG Leptospira repeat protein; KEGG: cbh:CLC_1691 hypothetical protein YP_002572612.1 KEGG: mhu:Mhun_0418 PKD YP_002572614.1 KEGG: DNA polymerase alpha ; K02320 DNA polymerase alpha subunit A YP_002572615.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: csc:Csac_1411 hypothetical protein YP_002572616.1 KEGG: csc:Csac_1446 hypothetical protein YP_002572617.1 PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2212 hypothetical protein YP_002572618.1 KEGG: csc:Csac_0889 hypothetical protein YP_002572619.1 KEGG: csc:Csac_0890 hypothetical protein YP_002572620.1 TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: cth:Cthe_1007 GTP-binding protein TypA YP_002572621.1 PFAM: aminodeoxychorismate lyase; KEGG: csc:Csac_0893 aminodeoxychorismate lyase YP_002572622.1 PFAM: O-methyltransferase family 3; KEGG: csc:Csac_0894 O-methyltransferase family protein YP_002572623.1 PFAM: peptidase U32; KEGG: csc:Csac_0895 peptidase U32 YP_002572624.1 sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment YP_002572625.1 PFAM: CopG domain protein DNA-binding domain protein YP_002572627.1 KEGG: csc:Csac_0571 hypothetical protein YP_002572628.1 KEGG: csc:Csac_0572 hypothetical protein YP_002572629.1 KEGG: csc:Csac_0573 hypothetical protein YP_002572630.1 KEGG: csc:Csac_0574 hypothetical protein YP_002572631.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: csc:Csac_0575 FliA/WhiG family RNA polymerase sigma factor YP_002572632.1 SMART: helix-turn-helix domain protein; KEGG: cba:CLB_2997 DNA-binding protein YP_002572633.1 PFAM: Bifunctional DNA primase/polymerase ; Primase 1; KEGG: mrd:Mrad2831_5166 bifunctional DNA primase/polymerase YP_002572634.1 KEGG: tpd:Teth39_0089 hypothetical protein YP_002572635.1 PFAM: integrase family protein; KEGG: csc:Csac_2713 phage integrase family protein YP_002572636.1 PFAM: protein of unknown function DUF402; KEGG: csc:Csac_0897 hypothetical protein YP_002572637.1 PFAM: dihydropteroate synthase DHPS; KEGG: csc:Csac_0898 dihydropteroate synthase, DhpS YP_002572638.1 PFAM: protein of unknown function DUF512; KEGG: csc:Csac_0899 hypothetical protein YP_002572639.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002572640.1 PFAM: protein of unknown function DUF205; KEGG: csc:Csac_0901 hypothetical protein YP_002572641.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: csc:Csac_0902 methyltransferase type 12 YP_002572642.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: csc:Csac_0903 cold-shock DNA-binding domain-containing protein YP_002572643.1 PFAM: Hsp33 protein; KEGG: csc:Csac_0904 HSP33 protein YP_002572644.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_002572645.1 KEGG: csc:Csac_0906 hypothetical protein YP_002572646.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0748 ABC transporter related YP_002572647.1 KEGG: csc:Csac_0747 hypothetical protein YP_002572648.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain YP_002572649.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002572650.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002572651.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0911 DNA polymerase beta subunit YP_002572652.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: csc:Csac_0912 HI0074 family nucleotidyltransferase substrate binding protein YP_002572653.1 PFAM: peptidase M16 domain protein; KEGG: csc:Csac_0913 peptidase M16 domain-containing protein YP_002572654.1 PFAM: peptidase M16 domain protein; KEGG: csc:Csac_0914 peptidase M16 domain-containing protein YP_002572655.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: csc:Csac_0915 prolipoprotein diacylglyceryl transferase YP_002572656.1 KEGG: aoe:Clos_1369 hypothetical protein YP_002572657.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_002572658.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: csc:Csac_0917 S-adenosyl-methyltransferase MraW YP_002572659.1 PFAM: Septum formation initiator; KEGG: csc:Csac_0918 septum formation initiator YP_002572660.1 KEGG: csc:Csac_0919 stage V sporulation protein D; TIGRFAM: stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; SMART: PASTA domain containing protein YP_002572661.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: csc:Csac_0920 UDP-N-acetylmuramyl-tripeptide synthetase YP_002572662.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: csc:Csac_0921 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_002572663.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002572664.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_002572665.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: csc:Csac_0924 cell division protein FtsW YP_002572666.1 KEGG: csc:Csac_0925 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28 YP_002572667.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: csc:Csac_0926 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002572668.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: csc:Csac_0927 polypeptide-transport-associated domain-containing protein YP_002572669.1 PFAM: protein of unknown function DUF881; KEGG: csc:Csac_0928 hypothetical protein YP_002572670.1 KEGG: csc:Csac_0929 hypothetical protein YP_002572671.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: csc:Csac_0930 cell division protein FtsZ YP_002572672.1 PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: csc:Csac_0931 peptidase U4, sporulation factor SpoIIGA YP_002572673.1 PFAM: Resolvase domain; regulatory protein MerR; KEGG: csc:Csac_1318 resolvase domain-containing protein YP_002572674.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: csc:Csac_0831 transposase, putative YP_002572675.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation YP_002572676.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin YP_002572677.1 PFAM: AMP-dependent synthetase and ligase; KEGG: csc:Csac_0934 AMP-dependent synthetase and ligase YP_002572678.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: csc:Csac_0935 diaminopimelate decarboxylase YP_002572679.1 PFAM: peptidase M50; KEGG: csc:Csac_0936 peptidase M50 YP_002572680.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002572681.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: csc:Csac_0938 chromosome segregation and condensation protein ScpA YP_002572682.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: csc:Csac_0939 putative transcriptional regulator YP_002572683.1 KEGG: csc:Csac_0940 hypothetical protein YP_002572684.1 TIGRFAM: sporulation protein YtfJ; KEGG: csc:Csac_0941 tubulin YP_002572685.1 KEGG: csc:Csac_0942 hypothetical protein YP_002572686.1 KEGG: csc:Csac_0944 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002572687.1 PFAM: AAA-4 family protein; KEGG: csc:Csac_0945 putative transcriptional regulator YP_002572688.1 PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: csc:Csac_0946 TPR repeat-containing protein YP_002572689.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: csc:Csac_0947 threonyl-tRNA synthetase YP_002572690.1 PFAM: 3-dehydroquinate synthase; KEGG: csc:Csac_0948 glutamate-1-semialdehyde 2,1-aminomutase YP_002572691.1 KEGG: csc:Csac_0949 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver YP_002572692.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002572693.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_002572694.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: csc:Csac_0954 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_002572695.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002572696.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002572697.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002572698.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002572699.1 TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: csc:Csac_0959 small GTP-binding protein YP_002572700.1 PFAM: NUDIX hydrolase; KEGG: csc:Csac_0960 NUDIX hydrolase YP_002572701.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: csc:Csac_0961 hypothetical protein YP_002572702.1 KEGG: csc:Csac_0962 hypothetical protein YP_002572703.1 PFAM: polysaccharide biosynthesis protein; KEGG: csc:Csac_0963 virulence factor MviN family protein YP_002572704.1 PFAM: protein of unknown function DUF28; KEGG: csc:Csac_0964 hypothetical protein YP_002572705.1 KEGG: csc:Csac_0965 hypothetical protein YP_002572706.1 KEGG: csc:Csac_0966 hypothetical protein YP_002572707.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: csc:Csac_0967 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_002572708.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_0968 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002572709.1 KEGG: csc:Csac_0969 aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase ; aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase YP_002572710.1 PFAM: thiamineS protein; KEGG: csc:Csac_0970 hypothetical protein YP_002572711.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: csc:Csac_0971 UBA/ThiF-type NAD/FAD binding protein YP_002572712.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0972 ABC-type tungstate transport system permease component-like protein YP_002572713.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0973 binding-protein-dependent transport systems inner membrane component YP_002572714.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0974 ABC transporter related YP_002572715.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: csc:Csac_0975 molybdenum cofactor synthesis domain-containing protein YP_002572716.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: csc:Csac_0976 molybdenum cofactor synthesis domain-containing protein YP_002572717.1 KEGG: csc:Csac_0977 radical SAM domain-containing protein; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002572718.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; MOSC domain containing protein; KEGG: csc:Csac_0978 molybdenum cofactor biosynthesis protein C YP_002572719.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: csc:Csac_0979 molybdenum cofactor synthesis domain-containing protein YP_002572720.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_0980 GCN5-related N-acetyltransferase YP_002572721.1 KEGG: csc:Csac_0981 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_002572722.1 KEGG: csc:Csac_0982 hypothetical protein YP_002572723.1 PFAM: glycosyl transferase family 4; KEGG: csc:Csac_0983 glycosyl transferase family protein YP_002572724.1 KEGG: csc:Csac_0984 hypothetical protein YP_002572725.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_002572726.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: csc:Csac_0986 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_002572727.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: csc:Csac_0987 phosphodiesterase YP_002572728.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_0988 GCN5-related N-acetyltransferase YP_002572729.1 PFAM: carbohydrate kinase FGGY; KEGG: csc:Csac_0989 carbohydrate kinase, FGGY YP_002572730.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: csc:Csac_0990 DeoR family transcriptional regulator YP_002572731.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002572732.1 PFAM: Prephenate dehydrogenase; KEGG: csc:Csac_2699 prephenate dehydrogenase YP_002572733.1 KEGG: csc:Csac_2698 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_002572734.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_002572735.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2696 ABC-type sugar transport system periplasmic component-like protein YP_002572736.1 KEGG: csc:Csac_2695 uroporphyrinogen-III decarboxylase-like protein YP_002572737.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2694 extracellular solute-binding protein YP_002572738.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2693 binding-protein-dependent transport systems inner membrane component YP_002572739.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2692 binding-protein-dependent transport systems inner membrane component YP_002572740.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: csc:Csac_2691 integral membrane sensor signal transduction histidine kinase YP_002572741.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: csc:Csac_2690 response regulator receiver protein YP_002572742.1 PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; glycoside hydrolase family 67; KEGG: csc:Csac_2689 alpha-glucuronidase YP_002572743.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: csc:Csac_2688 mannitol dehydrogenase domain-containing protein YP_002572744.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate YP_002572745.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: csc:Csac_2686 glycoside hydrolase family protein YP_002572746.1 PFAM: cobalt transport protein; KEGG: csc:Csac_2683 cobalt transport protein YP_002572747.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2682 ABC transporter related YP_002572748.1 KEGG: csc:Csac_2681 nicotinate phosphoribosyltransferase YP_002572749.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; KEGG: csc:Csac_0831 transposase, putative YP_002572750.1 PFAM: AAA-4 family protein; KEGG: pmo:Pmob_1244 putative transcriptional regulator YP_002572751.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_2676 DNA polymerase beta subunit YP_002572752.1 PFAM: protein of unknown function DUF86; KEGG: csc:Csac_2675 hypothetical protein YP_002572753.1 PFAM: protein of unknown function DUF45; KEGG: csc:Csac_2672 hypothetical protein YP_002572755.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002572756.1 PFAM: SNARE associated Golgi protein; KEGG: csc:Csac_1457 hypothetical protein YP_002572757.1 KEGG: csc:Csac_1458 pyruvate/ketoisovalerate oxidoreductase, gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase YP_002572758.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1459 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit YP_002572759.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: csc:Csac_1460 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002572760.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: csc:Csac_1461 thiamine pyrophosphate binding domain-containing protein YP_002572761.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: csc:Csac_1462 prephenate dehydratase YP_002572762.1 KEGG: csc:Csac_1463 hypothetical protein YP_002572763.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: csc:Csac_1464 phosphoesterase domain-containing protein YP_002572764.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002572765.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: csc:Csac_1466 replicative DNA helicase YP_002572766.1 KEGG: csc:Csac_1467 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; S-adenosyl-L-homocysteine hydrolase YP_002572767.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: csc:Csac_1468 amidohydrolase YP_002572768.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: csc:Csac_1469 integral membrane protein MviN YP_002572769.1 KEGG: csc:Csac_1470 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_002572770.1 KEGG: csc:Csac_1472 hypothetical protein YP_002572772.1 KEGG: csc:Csac_1473 hypothetical protein YP_002572773.1 PFAM: MMPL domain protein; KEGG: csc:Csac_1474 MmpL domain-containing protein YP_002572774.1 PFAM: transposase mutator type; KEGG: csc:Csac_2610 transposase, mutator type YP_002572775.1 PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2212 hypothetical protein YP_002572777.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fma:FMG_1267 macrolide ABC transporter ATP-binding protein YP_002572778.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1489 ABC transporter related YP_002572779.1 KEGG: ftn:FTN_0929 hypothetical protein YP_002572781.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fma:FMG_1408 ABC transporter ATP-binding protein YP_002572783.1 KEGG: cac:CAC2042 ABC transported MDR-type, permease component YP_002572787.1 KEGG: csc:Csac_2161 hypothetical protein YP_002572788.1 PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1480 major facilitator transporter YP_002572790.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ret:RHE_PD00342 putative biosynthetic heme protein YP_002572791.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ret:RHE_PD00342 putative biosynthetic heme protein YP_002572792.1 PFAM: Zeta toxin family protein; KEGG: csc:Csac_0067 zeta toxin family protein YP_002572793.1 KEGG: csc:Csac_0068 hypothetical protein YP_002572795.1 KEGG: csc:Csac_2161 hypothetical protein YP_002572796.1 KEGG: csc:Csac_1491 hypothetical protein YP_002572797.1 KEGG: csc:Csac_1491 hypothetical protein YP_002572798.1 KEGG: csc:Csac_1494 hypothetical protein YP_002572799.1 KEGG: csc:Csac_1919 hypothetical protein YP_002572800.1 KEGG: csc:Csac_1496 hypothetical protein YP_002572802.1 KEGG: csc:Csac_1497 rare lipoprotein A YP_002572803.1 PFAM: Rare lipoprotein A; KEGG: csc:Csac_1497 rare lipoprotein A YP_002572804.1 KEGG: csc:Csac_1498 hypothetical protein YP_002572805.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: csc:Csac_1499 NAD(P)H dehydrogenase (quinone) YP_002572806.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: csc:Csac_1500 iron-containing alcohol dehydrogenase YP_002572807.1 KEGG: csc:Csac_1501 hypothetical protein YP_002572808.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: csc:Csac_1502 FAD dependent oxidoreductase YP_002572809.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: csc:Csac_1503 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002572810.1 PFAM: protein of unknown function DUF1667; KEGG: csc:Csac_1504 hypothetical protein YP_002572811.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: csc:Csac_1505 glycerol-3-phosphate responsive antiterminator YP_002572812.1 KEGG: csc:Csac_1506 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase YP_002572813.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_002572814.1 PFAM: protein of unknown function DUF523; KEGG: csc:Csac_1508 hypothetical protein YP_002572815.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csc:Csac_1509 helix-turn-helix domain-containing protein YP_002572816.1 KEGG: csc:Csac_1510 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_002572817.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: csc:Csac_1511 galactokinase YP_002572818.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: csc:Csac_1512 UDP-glucose 4-epimerase YP_002572819.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002572820.1 KEGG: csc:Csac_2174 hypothetical protein YP_002572821.1 KEGG: csc:Csac_2184 hypothetical protein YP_002572822.1 KEGG: csc:Csac_2183 glutamyl-tRNA synthetase, class Ic YP_002572824.1 KEGG: cno:NT01CX_1186 hypothetical protein YP_002572825.1 KEGG: hypothetical protein YP_002572826.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_0819 ABC transporter related protein YP_002572828.1 KEGG: csc:Csac_2323 transposase, IS4 family protein YP_002572829.1 KEGG: csc:Csac_2173 hypothetical protein YP_002572830.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: csc:Csac_2183 glutamyl-tRNA synthetase, class Ic YP_002572831.1 KEGG: csc:Csac_2169 hypothetical protein YP_002572832.1 KEGG: csc:Csac_2168 hypothetical protein YP_002572833.1 PFAM: regulator of chromosome condensation RCC1; KEGG: mxa:MXAN_0889 RCC1 repeat domain protein YP_002572834.1 KEGG: csc:Csac_2168 hypothetical protein YP_002572835.1 KEGG: csc:Csac_2166 hypothetical protein YP_002572836.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: csc:Csac_2165 regulatory protein GntR, HTH YP_002572837.1 KEGG: csc:Csac_2164 hypothetical protein YP_002572838.1 KEGG: csc:Csac_2163 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein YP_002572839.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2162 ABC transporter related YP_002572840.1 KEGG: csc:Csac_2160 hypothetical protein YP_002572842.1 PFAM: putative helix-turn-helix protein YlxM/p13 family protein; Sigma-70 region 4 type 2; KEGG: csc:Csac_2159 putative helix-turn-helix protein, YlxM/p13 family protein YP_002572843.1 KEGG: csc:Csac_2158 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_002572844.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_002572845.1 KEGG: csc:Csac_2156 RNA-binding protein YP_002572846.1 Essential for efficient processing of 16S rRNA YP_002572847.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_002572848.1 PFAM: GTP-binding protein HSR1-related; KEGG: csc:Csac_2152 GTP-binding protein, HSR1-related YP_002572849.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_002572850.1 KEGG: csc:Csac_2150 hypothetical protein YP_002572851.1 KEGG: csc:Csac_2149 flagellar protein FhlB-like protein YP_002572852.1 PFAM: protein of unknown function UPF0102; KEGG: csc:Csac_2148 hypothetical protein YP_002572853.1 catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance YP_002572854.1 involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme YP_002572855.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: csc:Csac_2144 cell divisionFtsK/SpoIIIE YP_002572856.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: csc:Csac_2142 methylenetetrahydrofolate dehydrogenase (NADP(+)) YP_002572857.1 KEGG: csc:Csac_2141 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB YP_002572858.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: csc:Csac_2140 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002572859.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: csc:Csac_2139 competence/damage-inducible protein CinA YP_002572860.1 KEGG: csc:Csac_2138 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_002572861.1 KEGG: csc:Csac_2137 hypothetical protein YP_002572862.1 KEGG: csc:Csac_2136 metal dependent phosphohydrolase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KH type 1 domain protein; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_002572863.1 PFAM: metallophosphoesterase; KEGG: csc:Csac_2135 metallophosphoesterase YP_002572864.1 SMART: AAA ATPase; KEGG: csc:Csac_2134 AAA ATPase YP_002572865.1 KEGG: csc:Csac_2133 hypothetical protein YP_002572866.1 TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein; KEGG: csc:Csac_2132 stage III sporulation AC family protein YP_002572867.1 KEGG: csc:Csac_2131 hypothetical protein YP_002572868.1 KEGG: csc:Csac_2130 hypothetical protein YP_002572869.1 KEGG: csc:Csac_2129 hypothetical protein YP_002572870.1 KEGG: csc:Csac_2128 hypothetical protein YP_002572871.1 KEGG: csc:Csac_2127 hypothetical protein YP_002572872.1 PFAM: protein of unknown function DUF322; KEGG: csc:Csac_2126 hypothetical protein YP_002572873.1 KEGG: csc:Csac_2125 hypothetical protein YP_002572874.1 KEGG: csc:Csac_2124 hypothetical protein YP_002572875.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: csc:Csac_2123 NusB antitermination factor YP_002572876.1 KEGG: csc:Csac_2122 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_002572877.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: csc:Csac_2121 exodeoxyribonuclease VII, small subunit YP_002572878.1 PFAM: Polyprenyl synthetase; KEGG: csc:Csac_2120 polyprenyl synthetase YP_002572879.1 PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_2119 major facilitator transporter YP_002572880.1 TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: csc:Csac_2118 AbrB family transcriptional regulator YP_002572881.1 KEGG: csc:Csac_2117 hypothetical protein YP_002572882.1 TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_2116 thiamine pyrophosphate binding domain-containing protein YP_002572883.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: csc:Csac_2115 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002572884.1 KEGG: csc:Csac_2114 phenylacetate--CoA ligase YP_002572885.1 KEGG: csc:Csac_2113 hypothetical protein YP_002572886.1 PFAM: protein of unknown function DUF421; KEGG: csc:Csac_2112 hypothetical protein YP_002572887.1 KEGG: csc:Csac_2111 hypothetical protein YP_002572888.1 KEGG: csc:Csac_2110 hypothetical protein YP_002572889.1 PFAM: CoA-binding domain protein; KEGG: csc:Csac_2109 CoA-binding domain-containing protein YP_002572890.1 PFAM: protein of unknown function UPF0150; KEGG: csc:Csac_2108 hypothetical protein YP_002572891.1 PFAM: YcfA family protein; KEGG: csc:Csac_2107 YcfA family protein YP_002572892.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: csc:Csac_0575 FliA/WhiG family RNA polymerase sigma factor YP_002572893.1 KEGG: csc:Csac_0574 hypothetical protein YP_002572894.1 KEGG: csc:Csac_0573 hypothetical protein YP_002572895.1 KEGG: csc:Csac_0572 hypothetical protein YP_002572896.1 KEGG: csc:Csac_0571 hypothetical protein YP_002572897.1 KEGG: csc:Csac_2102 hypothetical protein YP_002572898.1 KEGG: 40S ribosomal protein S6-B; K02991 small subunit ribosomal protein S6e YP_002572899.1 PFAM: protein of unknown function DUF927; zinc finger CHC2-family protein; SMART: zinc finger CHC2-family protein; KEGG: aoe:Clos_1294 zinc finger CHC2-family protein YP_002572900.1 KEGG: tpd:Teth39_2242 excision promoter, Xis YP_002572901.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: csc:Csac_2097 XRE family transcriptional regulator YP_002572902.1 PFAM: protein of unknown function DUF820; KEGG: csc:Csac_0233 hypothetical protein YP_002572903.1 PFAM: integrase family protein; KEGG: csc:Csac_2713 phage integrase family protein YP_002572904.1 PFAM: protein of unknown function DUF89; KEGG: csc:Csac_2091 hypothetical protein YP_002572905.1 PFAM: histone deacetylase superfamily; KEGG: csc:Csac_2090 histone deacetylase superfamily protein YP_002572906.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: csc:Csac_2089 hydantoinase/oxoprolinase YP_002572907.1 PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: csc:Csac_2088 hypothetical protein YP_002572908.1 PFAM: protein of unknown function DUF370; KEGG: csc:Csac_2087 hypothetical protein YP_002572909.1 Essential for recycling GMP and indirectly, cGMP YP_002572910.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: csc:Csac_2085 DNA-directed RNA polymerase, omega subunit YP_002572911.1 KEGG: csc:Csac_2084 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_002572912.1 KEGG: csc:Csac_2083 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein YP_002572913.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_002572914.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: csc:Csac_2081 methionyl-tRNA formyltransferase YP_002572915.1 PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: csc:Csac_2080 peptidase, membrane zinc metallopeptidase, putative YP_002572916.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: csc:Csac_2079 sun protein YP_002572917.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_002572918.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: csc:Csac_2077 protein phosphatase 2C domain-containing protein YP_002572919.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: csc:Csac_2076 protein kinase YP_002572920.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: csc:Csac_2075 ribosome small subunit-dependent GTPase A YP_002572921.1 KEGG: csc:Csac_2074 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_002572922.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_002572923.1 KEGG: csc:Csac_2072 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein YP_002572924.1 PFAM: protein of unknown function DUF448; KEGG: csc:Csac_2071 hypothetical protein YP_002572925.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_002572926.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_002572927.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: csc:Csac_2068 phosphoesterase domain-containing protein YP_002572928.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: csc:Csac_2067 tRNA pseudouridine synthase B YP_002572929.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; cytidylyltransferase; KEGG: csc:Csac_2066 riboflavin biosynthesis protein RibF YP_002572930.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002572931.1 KEGG: csc:Csac_2064 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein YP_002572932.1 KEGG: csc:Csac_2063 hypothetical protein YP_002572933.1 PFAM: protein of unknown function DUF1212; KEGG: csc:Csac_2062 hypothetical protein YP_002572934.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002572935.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: csc:Csac_2060 recombination factor protein RarA YP_002572936.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: csc:Csac_2059 malate dehydrogenase YP_002572937.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_002572938.1 KEGG: csc:Csac_1514 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_002572939.1 PFAM: 8-oxoguanine DNA glycosylase domain protein; HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: csc:Csac_1515 8-oxoguanine DNA glycosylase domain-containing protein YP_002572940.1 KEGG: csc:Csac_1516 hypothetical protein YP_002572941.1 PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1517 major facilitator transporter YP_002572942.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_002572943.1 PFAM: protein of unknown function DUF1385; KEGG: csc:Csac_1521 hypothetical protein YP_002572944.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: csc:Csac_1522 HemK family modification methylase YP_002572945.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: csc:Csac_1523 peptide chain release factor 1 YP_002572946.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: csc:Csac_1524 MotA/TolQ/ExbB proton channel YP_002572947.1 PFAM: OmpA/MotB domain protein; KEGG: csc:Csac_1525 OmpA/MotB domain-containing protein YP_002572948.1 PFAM: zinc/iron permease; KEGG: csc:Csac_1526 zinc/iron permease YP_002572949.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: csc:Csac_1527 SUA5/YciO/YrdC/YwlC family protein YP_002572950.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: csc:Csac_1528 protein tyrosine phosphatase YP_002572951.1 PFAM: protein of unknown function DUF163; KEGG: csc:Csac_1529 hypothetical protein YP_002572952.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_002572953.1 KEGG: csc:Csac_1531 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_002572954.1 PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; SMART: cell wall hydrolase/autolysin; KEGG: csc:Csac_1532 cell wall hydrolase/autolysin YP_002572955.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: csc:Csac_1533 Cof-like hydrolase YP_002572956.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: csc:Csac_1534 NADH dehydrogenase (quinone) YP_002572957.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: csc:Csac_1535 respiratory-chain NADH dehydrogenase, subunit 1 YP_002572958.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: csc:Csac_1536 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_002572959.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: csc:Csac_1537 NADH dehydrogenase (ubiquinone), 30 kDa subunit YP_002572960.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: csc:Csac_1538 NADH-ubiquinone oxidoreductase, chain 49kDa YP_002572961.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1539 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002572962.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: csc:Csac_1540 hydrogenase nickel insertion protein HypA YP_002572963.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: csc:Csac_1541 hydrogenase accessory protein HypB YP_002572964.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: csc:Csac_1542 (NiFe) hydrogenase maturation protein HypF YP_002572965.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: csc:Csac_1543 hydrogenase assembly chaperone HypC/HupF YP_002572966.1 PFAM: hydrogenase formation HypD protein; KEGG: csc:Csac_1544 hydrogenase formation HypD protein YP_002572967.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: csc:Csac_1545 hydrogenase expression/formation protein HypE YP_002572968.1 KEGG: csc:Csac_1547 hypothetical protein YP_002572969.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1548 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002572970.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: csc:Csac_1549 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002572971.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: csc:Csac_1550 thiamine pyrophosphate binding domain-containing protein YP_002572972.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: csc:Csac_1551 pyruvate ferredoxin/flavodoxin oxidoreductase YP_002572973.1 PFAM: VanW family protein; G5 domain protein; KEGG: csc:Csac_1552 VanW family protein YP_002572974.1 KEGG: csc:Csac_1553 hypothetical protein YP_002572975.1 KEGG: csc:Csac_1554 hypothetical protein YP_002572976.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: csc:Csac_1556 regulatory protein, ArsR YP_002572977.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: csc:Csac_1561 alpha-N-arabinofuranosidase YP_002572978.1 PFAM: glycoside hydrolase family 4; KEGG: csc:Csac_1562 glycoside hydrolase family protein YP_002572979.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_1563 GCN5-related N-acetyltransferase YP_002572981.1 PFAM: Lanthionine synthetase C family protein; KEGG: bha:BH0455 lantibiotic mersacidin modifying enzyme YP_002572982.1 KEGG: cbe:Cbei_4585 NADPH-dependent FMN reductase YP_002572983.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bce:BC3666 bacitracin transport ATP-binding protein BcrA YP_002572984.1 KEGG: cac:CAC2041 ABC transported MDR-type, permease component YP_002572985.1 KEGG: cbh:CLC_1232 hypothetical protein YP_002572986.1 PFAM: ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bha:BH0451 lantibiotic mersacidin transporter system YP_002572987.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_1563 GCN5-related N-acetyltransferase YP_002572988.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_002572989.1 KEGG: csc:Csac_1565 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_002572990.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_002572991.1 PFAM: protein of unknown function DUF208; KEGG: csc:Csac_1567 hypothetical protein YP_002572992.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: csc:Csac_1568 ribosomal protein L21 YP_002572993.1 PFAM: protein of unknown function DUF464; KEGG: csc:Csac_1569 hypothetical protein YP_002572994.1 involved in the peptidyltransferase reaction during translation YP_002572995.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_002572997.1 PFAM: protein of unknown function UPF0044; KEGG: csc:Csac_1573 hypothetical protein YP_002572998.1 KEGG: csc:Csac_1574 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_002572999.1 KEGG: csc:Csac_1575 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_002573000.1 PFAM: beta-lactamase domain protein; KEGG: csc:Csac_1576 beta-lactamase domain-containing protein YP_002573001.1 PFAM: peptidase M19 renal dipeptidase; KEGG: csc:Csac_1577 peptidase M19, renal dipeptidase YP_002573002.1 PFAM: aminotransferase class I and II; KEGG: csc:Csac_1578 aminotransferase, class I and II YP_002573003.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_002573004.1 PFAM: Cache type 2 domain protein; chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: tpt:Tpet_1365 methyl-accepting chemotaxis sensory transducer YP_002573005.1 catalyzes the magnesium and ATP-dependent positive supercoiling of DNA; contains helicase and topoisomerase domains YP_002573006.1 PFAM: amino acid-binding ACT domain protein; KEGG: csc:Csac_1581 amino acid-binding ACT domain-containing protein YP_002573007.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002573008.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: csc:Csac_1583 dihydrodipicolinate synthase YP_002573009.1 KEGG: csc:Csac_1584 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_002573010.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: csc:Csac_1585 HI0074 family nucleotidyltransferase substrate binding protein YP_002573011.1 KEGG: csc:Csac_1587 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_002573012.1 KEGG: csc:Csac_1588 hypothetical protein YP_002573013.1 KEGG: csc:Csac_1589 hypothetical protein YP_002573014.1 PFAM: protein of unknown function DUF87; KEGG: csc:Csac_1590 hypothetical protein YP_002573015.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: csc:Csac_1591 nuclease SbcCD, D subunit YP_002573016.1 PFAM: SMC domain protein; KEGG: csc:Csac_1592 SMC domain-containing protein YP_002573017.1 PFAM: conserved hypothetical protein; KEGG: csc:Csac_1593 hypothetical protein YP_002573018.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002573019.1 KEGG: csc:Csac_1595 hypothetical protein YP_002573021.1 KEGG: csc:Csac_1596 hypothetical protein YP_002573022.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: csc:Csac_1597 NAD-dependent epimerase/dehydratase YP_002573023.1 KEGG: csc:Csac_1598 hypothetical protein YP_002573024.1 PFAM: protein of unknown function DUF1292; KEGG: csc:Csac_1599 hypothetical protein YP_002573025.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: csc:Csac_1600 UTP-glucose-1-phosphate uridylyltransferase GalU YP_002573026.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria YP_002573027.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: csc:Csac_1602 fatty acid/phospholipid synthesis protein PlsX YP_002573028.1 KEGG: csc:Csac_1603 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_002573029.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: csc:Csac_1604 malonyl CoA-acyl carrier protein transacylase YP_002573030.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: csc:Csac_1605 3-oxoacyl-(acyl-carrier-protein) reductase YP_002573031.1 carries the fatty acid chain in fatty acid biosynthesis YP_002573032.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: csc:Csac_1607 beta-ketoacyl synthase YP_002573033.1 KEGG: csc:Csac_1608 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_002573034.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: csc:Csac_1609 radical SAM domain-containing protein YP_002573035.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_1610 phosphate binding protein YP_002573036.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1611 phosphate ABC transporter, inner membrane subunit PstC YP_002573037.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1612 phosphate ABC transporter, inner membrane subunit PstA YP_002573038.1 PFAM: Stage V sporulation protein S; KEGG: csc:Csac_1613 stage V sporulation protein S YP_002573039.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cth:Cthe_1840 cysteine synthase YP_002573040.1 KEGG: csc:Csac_0851 hypothetical protein YP_002573041.1 KEGG: csc:Csac_1620 hypothetical protein YP_002573042.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: csc:Csac_1621 chromosome segregation protein SMC YP_002573043.1 KEGG: csc:Csac_1622 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_002573044.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: csc:Csac_1623 cyclic nucleotide-binding protein YP_002573045.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1624 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002573046.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_002573047.1 KEGG: tpd:Teth39_1804 hypothetical protein YP_002573048.1 KEGG: csc:Csac_1627 hypothetical protein YP_002573049.1 KEGG: csc:Csac_1628 hypothetical protein YP_002573050.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_002573051.1 KEGG: csc:Csac_1630 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_002573052.1 PFAM: major facilitator superfamily MFS_1; KEGG: tpd:Teth39_1801 major facilitator transporter YP_002573053.1 KEGG: csc:Csac_1235 hypothetical protein YP_002573054.1 KEGG: csc:Csac_1234 hypothetical protein YP_002573055.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: csc:Csac_1631 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_002573056.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1632 ABC transporter related YP_002573057.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1633 binding-protein-dependent transport systems inner membrane component YP_002573058.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: csc:Csac_1634 thiamine biosynthesis protein ThiS YP_002573059.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: csc:Csac_1635 UBA/ThiF-type NAD/FAD binding protein YP_002573060.1 PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; KEGG: csc:Csac_1636 Mov34/MPN/PAD-1 family protein YP_002573061.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: csc:Csac_1637 nitrite and sulphite reductase 4Fe-4S region YP_002573062.1 PFAM: SirA family protein; KEGG: csc:Csac_1638 SirA family protein YP_002573063.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: csc:Csac_1639 O-acetylhomoserine aminocarboxypropyltransferase YP_002573064.1 catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite YP_002573065.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1641 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002573066.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_002573067.1 KEGG: csc:Csac_1643 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_002573068.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_002573069.1 catalyzes the formation of siroheme from precorrin-2 YP_002573070.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: csc:Csac_0413 IS605 family transposase OrfB YP_002573071.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_002573072.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: csc:Csac_1652 uroporphyrin-III C-methyltransferase YP_002573073.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002573074.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_002573075.1 PFAM: PP-loop domain protein; ExsB family protein; KEGG: csc:Csac_1655 ExsB family protein YP_002573077.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: csc:Csac_1769 translation initiation factor IF-3 YP_002573078.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: csc:Csac_1770 ribosomal protein L35 YP_002573079.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002573080.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: csc:Csac_1772 tRNA/rRNA methyltransferase (SpoU) YP_002573081.1 PFAM: protein of unknown function DUF965; KEGG: csc:Csac_1773 hypothetical protein YP_002573082.1 KEGG: csc:Csac_1774 hypothetical protein YP_002573083.1 PFAM: aldo/keto reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1775 aldo/keto reductase YP_002573084.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: csc:Csac_1776 Holliday junction resolvase YqgF YP_002573085.1 KEGG: csc:Csac_1777 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_002573086.1 KEGG: csc:Csac_1778 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_002573087.1 KEGG: csc:Csac_1779 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_002573088.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: csc:Csac_1780 nitrate reductase YP_002573089.1 KEGG: csc:Csac_1781 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein YP_002573090.1 PFAM: NUDIX hydrolase; KEGG: csc:Csac_1782 NUDIX hydrolase YP_002573091.1 PFAM: protein of unknown function Met10; Methyltransferase type 12; putative RNA methylase; SMART: PUA domain containing protein; KEGG: csc:Csac_1783 protein of unknown function Met10 YP_002573092.1 TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; KEGG: csc:Csac_1784 NOL1/NOP2/sun family RNA methylase YP_002573093.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: csc:Csac_1785 pseudouridine synthase YP_002573094.1 KEGG: csc:Csac_1786 hypothetical protein YP_002573095.1 PFAM: protein of unknown function DUF322; KEGG: csc:Csac_1787 hypothetical protein YP_002573096.1 PFAM: Dak phosphatase; KEGG: csc:Csac_1788 Dak phosphatase YP_002573097.1 KEGG: csc:Csac_1789 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase domain protein YP_002573098.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: csc:Csac_1790 small acid-soluble spore protein, alpha/beta type YP_002573099.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: csc:Csac_1791 putative methyltransferase YP_002573100.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002573101.1 KEGG: csc:Csac_1793 hypothetical protein YP_002573102.1 PFAM: nucleoside recognition domain protein; KEGG: csc:Csac_1794 hypothetical protein YP_002573103.1 PFAM: Patatin; KEGG: csc:Csac_1795 patatin YP_002573104.1 PFAM: protein of unknown function DUF795; KEGG: csc:Csac_1796 hypothetical protein YP_002573105.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: csc:Csac_1797 acyl-CoA dehydrogenase domain-containing protein YP_002573106.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: csc:Csac_1798 electron transfer flavoprotein beta-subunit YP_002573107.1 PFAM: Electron transfer flavoprotein alpha subunit; KEGG: csc:Csac_1799 electron transfer flavoprotein, alpha subunit YP_002573108.1 PFAM: beta-lactamase domain protein; KEGG: csc:Csac_1800 beta-lactamase domain-containing protein YP_002573109.1 KEGG: csc:Csac_1801 lipopolysaccharide biosynthesis protein YP_002573110.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: csc:Csac_1802 glutamine--scyllo-inositol transaminase YP_002573111.1 KEGG: csc:Csac_1803 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; 6-phosphogluconate dehydrogenase NAD-binding YP_002573112.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: csc:Csac_1804 oxidoreductase domain-containing protein YP_002573113.1 KEGG: csc:Csac_1805 hexapaptide repeat-containing transferase YP_002573114.1 KEGG: csc:Csac_1806 hypothetical protein YP_002573115.1 KEGG: csc:Csac_1807 hypothetical protein YP_002573116.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_1808 glycosyl transferase, group 1 YP_002573117.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: csc:Csac_1809 cell envelope-related transcriptional attenuator YP_002573118.1 PFAM: transcription factor CarD; KEGG: csc:Csac_1810 CarD family transcriptional regulator YP_002573119.1 KEGG: csc:Csac_1811 hypothetical protein YP_002573120.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_002573121.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: csc:Csac_1813 argininosuccinate lyase YP_002573122.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002573123.1 KEGG: csc:Csac_1815 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_002573124.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: csc:Csac_1816 metal dependent phosphohydrolase YP_002573125.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: csc:Csac_1817 cell envelope-related transcriptional attenuator YP_002573126.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: csc:Csac_1818 iojap-like protein YP_002573127.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_002573128.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: csc:Csac_1820 serine-type D-Ala-D-Ala carboxypeptidase YP_002573129.1 PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2212 hypothetical protein YP_002573130.1 KEGG: csc:Csac_1821 helix-hairpin-helix repeat-containing competence protein ComEA; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1 YP_002573131.1 PFAM: protein of unknown function DUF177; KEGG: csc:Csac_1823 hypothetical protein YP_002573132.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_002573133.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: csc:Csac_1825 5-formyltetrahydrofolate cyclo-ligase YP_002573134.1 KEGG: csc:Csac_1826 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002573135.1 catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria. YP_002573136.1 tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination YP_002573137.1 KEGG: csc:Csac_1829 hypothetical protein YP_002573138.1 KEGG: csc:Csac_1830 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_002573139.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta; KEGG: csc:Csac_1831 pyruvate kinase YP_002573140.1 PFAM: thioesterase superfamily protein; KEGG: csc:Csac_1832 thioesterase superfamily protein YP_002573141.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002573142.1 KEGG: csc:Csac_1834 GatB/YqeY domain-containing protein YP_002573143.1 TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: csc:Csac_1835 hypothetical protein YP_002573144.1 KEGG: csc:Csac_1836 hypothetical protein YP_002573145.1 PFAM: PhoH family protein; KEGG: csc:Csac_1837 PhoH family protein YP_002573146.1 KEGG: csc:Csac_1838 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; SMART: metal-dependent phosphohydrolase HD region YP_002573147.1 PFAM: protein of unknown function UPF0054; KEGG: csc:Csac_1839 hypothetical protein YP_002573148.1 PFAM: diacylglycerol kinase; phosphoesterase PA-phosphatase related; KEGG: csc:Csac_1840 diacylglycerol kinase YP_002573149.1 KEGG: csc:Csac_1841 hypothetical protein YP_002573150.1 PFAM: RNA-metabolising metallo-beta-lactamase; beta-lactamase domain protein; KEGG: csc:Csac_1842 RNA-metabolising metallo-beta-lactamase YP_002573151.1 KEGG: csc:Csac_1843 hypothetical protein YP_002573152.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002573153.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: csc:Csac_1845 serine-type D-Ala-D-Ala carboxypeptidase YP_002573154.1 KEGG: csc:Csac_1846 hypothetical protein YP_002573155.1 KEGG: csc:Csac_1847 RNA modification protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB YP_002573156.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002573157.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_002573158.1 PFAM: UvrD/REP helicase; KEGG: csc:Csac_1850 UvrD/REP helicase YP_002573159.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: csc:Csac_1851 acid phosphatase/vanadium-dependent haloperoxidase related YP_002573160.1 KEGG: csc:Csac_1852 hypothetical protein YP_002573161.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: csc:Csac_1853 deoxyxylulose-5-phosphate synthase YP_002573162.1 KEGG: csc:Csac_1854 hemolysin A; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein YP_002573163.1 KEGG: csc:Csac_1855 hypothetical protein YP_002573164.1 PFAM: ATP-binding region ATPase domain protein; KEGG: csc:Csac_1856 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_002573165.1 PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1857 Fe-S cluster domain-containing protein YP_002573166.1 KEGG: csc:Csac_1858 hypothetical protein YP_002573167.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: csc:Csac_1859 phosphotransferase domain-containing protein YP_002573168.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: csc:Csac_1860 NADH dehydrogenase (ubiquinone), 24 kDa subunit YP_002573169.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: csc:Csac_1861 histidine kinase YP_002573170.1 KEGG: csc:Csac_1862 hypothetical protein YP_002573171.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1863 NADH dehydrogenase (quinone) YP_002573172.1 TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1864 hydrogenase, Fe-only YP_002573173.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: csc:Csac_1865 maf protein YP_002573174.1 functions in MreBCD complex in some organisms YP_002573175.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: csc:Csac_1867 rod shape-determining protein MreC YP_002573176.1 KEGG: csc:Csac_1868 hypothetical protein YP_002573177.1 KEGG: csc:Csac_1869 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_002573178.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: csc:Csac_1870 septum site-determining protein MinC YP_002573179.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: csc:Csac_1871 septum site-determining protein MinD YP_002573180.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: csc:Csac_1872 cell division topological specificity factor MinE YP_002573181.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: csc:Csac_1873 rod shape-determining protein RodA YP_002573182.1 KEGG: csc:Csac_1874 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein YP_002573183.1 PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: csc:Csac_1875 thiamin pyrophosphokinase, catalytic region YP_002573184.1 KEGG: csc:Csac_1876 hypothetical protein YP_002573185.1 PFAM: glycosyl transferase family 2; KEGG: csc:Csac_1877 glycosyl transferase family protein YP_002573186.1 KEGG: csc:Csac_1878 hypothetical protein YP_002573187.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_002573188.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: csc:Csac_1880 putative agmatinase YP_002573189.1 PFAM: carboxyl transferase; KEGG: csc:Csac_1881 carboxyl transferase YP_002573191.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: csc:Csac_1882 biotin/lipoyl attachment domain-containing protein YP_002573192.1 PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; KEGG: csc:Csac_1883 hypothetical protein YP_002573193.1 KEGG: csc:Csac_1884 hypothetical protein YP_002573194.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: csc:Csac_1885 RpiR family transcriptional regulator YP_002573195.1 PFAM: Phosphoglycerate mutase; KEGG: csc:Csac_1886 phosphoglycerate mutase YP_002573196.1 PFAM: HutP family protein; KEGG: csc:Csac_1887 hypothetical protein YP_002573197.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: csc:Csac_1888 chorismate mutase YP_002573198.1 KEGG: csc:Csac_1889 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_002573199.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: csc:Csac_1890 phospholipid/glycerol acyltransferase YP_002573200.1 KEGG: csc:Csac_1891 hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein YP_002573201.1 KEGG: csc:Csac_1892 hypothetical protein YP_002573203.1 PFAM: protein of unknown function UPF0118; KEGG: csc:Csac_1893 hypothetical protein YP_002573204.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002573205.1 PFAM: histidine triad (HIT) protein; KEGG: csc:Csac_1895 histidine triad (HIT) protein YP_002573206.1 PFAM: ATP-NAD/AcoX kinase; KEGG: csc:Csac_1896 ATP-NAD/AcoX kinase YP_002573207.1 TIGRFAM: arginine repressor; PFAM: arginine repressor; KEGG: csc:Csac_1897 arginine repressor, ArgR YP_002573208.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: csc:Csac_1898 DNA repair protein RecN YP_002573209.1 TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; KEGG: csc:Csac_1899 peptidase S55, SpoIVB YP_002573210.1 KEGG: csc:Csac_1900 response regulator receiver protein; TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver YP_002573211.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: csc:Csac_1901 polysaccharide biosynthesis protein YP_002573212.1 KEGG: csc:Csac_1902 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_002573213.1 PFAM: ribonuclease H; KEGG: csc:Csac_1903 ribonuclease H YP_002573214.1 KEGG: csc:Csac_1904 hypothetical protein YP_002573215.1 PFAM: NUDIX hydrolase; KEGG: csc:Csac_1905 NUDIX hydrolase YP_002573216.1 PFAM: PHP domain protein; KEGG: csc:Csac_1906 hypothetical protein YP_002573217.1 PFAM: alanine racemase domain protein; KEGG: csc:Csac_1907 alanine racemase domain-containing protein YP_002573218.1 PFAM: protein of unknown function DUF552; KEGG: csc:Csac_1908 hypothetical protein YP_002573219.1 PFAM: protein of unknown function YGGT; KEGG: csc:Csac_1909 protein of unknown function YGGT YP_002573220.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: csc:Csac_1910 RNA-binding S4 domain-containing protein YP_002573221.1 PFAM: DivIVA family protein; KEGG: csc:Csac_1911 DivIVA family protein YP_002573222.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: csc:Csac_1912 isoleucyl-tRNA synthetase YP_002573223.1 KEGG: csc:Csac_1913 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_002573225.1 KEGG: cpe:PCP29 hypothetical protein YP_002573226.1 KEGG: csc:Csac_1914 hypothetical protein YP_002573227.1 PFAM: Penicillinase repressor; KEGG: csc:Csac_1915 CopY family transcriptional regulator YP_002573228.1 PFAM: peptidase M56 BlaR1; KEGG: csc:Csac_1916 peptidase M56, BlaR1 YP_002573229.1 KEGG: csc:Csac_1917 hypothetical protein YP_002573230.1 KEGG: csc:Csac_1918 hypothetical protein YP_002573231.1 KEGG: csc:Csac_1920 hypothetical protein YP_002573232.1 KEGG: csc:Csac_1921 hypothetical protein YP_002573233.1 KEGG: csc:Csac_1923 aIF-2BI family translation initiation factor; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_002573234.1 TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: csc:Csac_1924 methylthioadenosine phosphorylase YP_002573235.1 KEGG: csc:Csac_1925 hypothetical protein YP_002573236.1 TIGRFAM: sporulation protein, yteA family; PFAM: zinc finger DksA/TraR C4-type; KEGG: csc:Csac_1926 TraR/DksA family transcriptional regulator YP_002573237.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: hma:rrnB0167 calcium-binding protein-like YP_002573243.1 KEGG: hypothetical protein YP_002573244.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002573245.1 KEGG: csc:Csac_1928 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_002573246.1 PFAM: phosphoribosyltransferase; KEGG: csc:Csac_1929 uracil phosphoribosyltransferase YP_002573247.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: csc:Csac_1930 uracil-xanthine permease YP_002573248.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_002573249.1 KEGG: csc:Csac_1932 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_002573250.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: csc:Csac_1933 orotidine 5'-phosphate decarboxylase YP_002573251.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_002573252.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: csc:Csac_1935 oxidoreductase FAD/NAD(P)-binding subunit YP_002573253.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: csc:Csac_1936 dihydroorotate dehydrogenase family protein YP_002573254.1 PFAM: Phosphoglycerate mutase; KEGG: csc:Csac_1937 phosphoglycerate mutase YP_002573255.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002573256.1 KEGG: cpy:Cphy_2024 hypothetical protein YP_002573257.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1939 ABC transporter related YP_002573258.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1940 ABC transporter related YP_002573259.1 PFAM: inner-membrane translocator; KEGG: csc:Csac_1941 inner-membrane translocator YP_002573260.1 PFAM: inner-membrane translocator; KEGG: csc:Csac_1942 inner-membrane translocator YP_002573261.1 PFAM: Extracellular ligand-binding receptor; KEGG: csc:Csac_1943 extracellular ligand-binding receptor YP_002573262.1 PFAM: Protein of unknown function DUF1867; KEGG: csc:Csac_1944 hypothetical protein YP_002573263.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_002573264.1 PFAM: Peptidoglycan-binding LysM; KEGG: csc:Csac_1946 peptidoglycan-binding LysM YP_002573266.1 KEGG: fps:FP2472 hypothetical protein YP_002573269.1 KEGG: rrs:RoseRS_3796 hypothetical protein YP_002573270.1 PFAM: ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: csc:Csac_0158 ABC-type bacteriocin transporter YP_002573271.1 PFAM: PilT protein domain protein; KEGG: csc:Csac_1947 PilT domain-containing protein YP_002573272.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: csc:Csac_1948 CopG/DNA-binding domain-containing protein YP_002573273.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism YP_002573274.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002573275.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002573276.1 converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway and catalyzes the reversable isomerization of dihydroxyacetone phosphate to glyceraldehyde-3-phosphate YP_002573277.1 KEGG: csc:Csac_1953 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_002573278.1 PFAM: putative sugar-binding domain protein; KEGG: csc:Csac_1954 DeoR family transcriptional regulator YP_002573280.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002573281.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002573282.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: csc:Csac_1957 DNA repair protein RecO YP_002573283.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: csc:Csac_1958 GTP-binding protein Era YP_002573284.1 KEGG: csc:Csac_1959 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase YP_002573285.1 PFAM: aminotransferase class I and II; KEGG: csc:Csac_1960 aminotransferase, class I and II YP_002573286.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: csc:Csac_1961 AsnC family transcriptional regulator YP_002573287.1 KEGG: csc:Csac_1962 hypothetical protein YP_002573288.1 KEGG: csc:Csac_1963 hypothetical protein YP_002573289.1 KEGG: csc:Csac_1964 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_002573290.1 PFAM: peptidase M16 domain protein; KEGG: csc:Csac_1965 processing peptidase YP_002573291.1 PFAM: heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: heat shock protein DnaJ domain protein; KEGG: csc:Csac_1966 heat shock protein DnaJ domain-containing protein YP_002573292.1 KEGG: csc:Csac_1967 hypothetical protein YP_002573293.1 KEGG: csc:Csac_1968 hypothetical protein YP_002573294.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: csc:Csac_1969 ATP synthase F1, epsilon subunit YP_002573295.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002573296.1 KEGG: csc:Csac_1971 ATP synthase F1, gamma subunit; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_002573297.1 KEGG: csc:Csac_1972 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_002573298.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: csc:Csac_1973 ATP synthase F1, delta subunit YP_002573299.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: csc:Csac_1974 ATP synthase F0, B subunit YP_002573300.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: csc:Csac_1975 ATP synthase F0, C subunit YP_002573301.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_002573302.1 KEGG: csc:Csac_1977 hypothetical protein YP_002573303.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_002573304.1 PFAM: Auxin Efflux Carrier; KEGG: csc:Csac_1979 auxin efflux carrier YP_002573305.1 KEGG: csc:Csac_1981 hypothetical protein YP_002573306.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: csc:Csac_1982 beta-lactamase domain-containing protein YP_002573307.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: csc:Csac_1983 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002573308.1 KEGG: csc:Csac_1984 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_002573309.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_002573310.1 PFAM: Lytic transglycosylase catalytic; KEGG: csc:Csac_1986 lytic transglycosylase, catalytic YP_002573311.1 KEGG: csc:Csac_1987 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_002573312.1 KEGG: csc:Csac_1988 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2 YP_002573313.1 KEGG: csc:Csac_1989 hypothetical protein YP_002573314.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: csc:Csac_1990 rubredoxin-type Fe(Cys)4 protein YP_002573315.1 KEGG: csc:Csac_1991 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201 YP_002573316.1 KEGG: csc:Csac_1992 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region YP_002573317.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: csc:Csac_1993 phosphoribosylglycinamide formyltransferase YP_002573318.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_002573319.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: csc:Csac_1995 amidophosphoribosyltransferase YP_002573320.1 KEGG: csc:Csac_1996 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_002573321.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: csc:Csac_1997 phosphoribosylformylglycinamidine synthase I YP_002573322.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: csc:Csac_1998 phosphoribosylformylglycinamidine synthase, PurS YP_002573323.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_002573324.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: csc:Csac_2000 xanthine/uracil/vitamin C permease YP_002573325.1 KEGG: csc:Csac_2001 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_002573326.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: csc:Csac_2002 integral membrane sensor signal transduction histidine kinase YP_002573327.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: csc:Csac_2003 two component transcriptional regulator YP_002573328.1 PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: csc:Csac_2004 AIR synthase-like protein YP_002573329.1 KEGG: csc:Csac_2005 hypothetical protein YP_002573330.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: csc:Csac_2006 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002573331.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA YP_002573332.1 KEGG: csc:Csac_2008 hypothetical protein YP_002573333.1 PFAM: polysaccharide deacetylase; KEGG: csc:Csac_2009 polysaccharide deacetylase YP_002573334.1 KEGG: csc:Csac_2010 hypothetical protein YP_002573335.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: csc:Csac_2011 UBA/ThiF-type NAD/FAD binding protein YP_002573336.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: csc:Csac_2012 putative CoA-substrate-specific enzyme activase YP_002573337.1 KEGG: csc:Csac_2013 hypothetical protein YP_002573338.1 KEGG: csc:Csac_2014 hypothetical protein YP_002573339.1 KEGG: cth:Cthe_1283 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_002573340.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_2016 GCN5-related N-acetyltransferase YP_002573341.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: csc:Csac_2017 integral membrane protein MviN YP_002573342.1 PFAM: Nucleotidyl transferase; KEGG: csc:Csac_2018 mannose-1-phosphate guanylyltransferase (GDP) YP_002573343.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis YP_002573344.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: csc:Csac_2020 imidazoleglycerol phosphate synthase, cyclase subunit YP_002573345.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: csc:Csac_2021 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_002573346.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002573347.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: csc:Csac_2023 imidazoleglycerol-phosphate dehydratase YP_002573348.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: csc:Csac_2024 aminotransferase, class I and II YP_002573349.1 KEGG: csc:Csac_2025 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase YP_002573350.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_002573351.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: csc:Csac_2027 histidine--tRNA ligase YP_002573352.1 PFAM: protein of unknown function DUF988; KEGG: csc:Csac_2028 hypothetical protein YP_002573353.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: csc:Csac_2029 phosphate uptake regulator, PhoU YP_002573354.1 KEGG: csc:Csac_2030 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_002573355.1 PFAM: protein of unknown function DUF47; KEGG: csc:Csac_2031 hypothetical protein YP_002573356.1 PFAM: phosphate transporter; KEGG: csc:Csac_2032 phosphate transporter YP_002573357.1 KEGG: csc:Csac_2033 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_002573358.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: csc:Csac_2034 two component transcriptional regulator YP_002573359.1 PFAM: protein of unknown function DUF152; KEGG: csc:Csac_2035 hypothetical protein YP_002573360.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_002573361.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: csc:Csac_2037 FolC bifunctional protein YP_002573362.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_002573363.1 TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; KEGG: csc:Csac_2039 desulfoferrodoxin YP_002573364.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_002573365.1 TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; KEGG: csc:Csac_2041 phosphate acetyltransferase YP_002573366.1 Represses a number of genes involved in the response to DNA damage YP_002573367.1 PFAM: Aluminium resistance family protein; KEGG: csc:Csac_2043 aluminium resistance family protein YP_002573368.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: csc:Csac_2044 RNA chaperone Hfq YP_002573369.1 KEGG: csc:Csac_2045 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_002573370.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_2046 DNA mismatch repair protein MutL YP_002573371.1 This protein performs the mismatch recognition step during the DNA repair process YP_002573372.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_002573373.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: csc:Csac_2049 small acid-soluble spore protein, alpha/beta type YP_002573374.1 PFAM: amino acid-binding ACT domain protein; KEGG: csc:Csac_2050 amino acid-binding ACT domain-containing protein YP_002573375.1 KEGG: csc:Csac_2051 phenylacetate--CoA ligase YP_002573376.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: csc:Csac_2052 indolepyruvate ferredoxin oxidoreductase YP_002573377.1 TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_2053 thiamine pyrophosphate binding domain-containing protein YP_002573378.1 KEGG: csc:Csac_2054 phenylacetate--CoA ligase YP_002573379.1 KEGG: csc:Csac_2055 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase YP_002573380.1 PFAM: heat shock protein Hsp20; KEGG: csc:Csac_2056 heat shock protein HSP20 YP_002573381.1 PFAM: ATP-cone domain protein; KEGG: csc:Csac_2057 transcriptional regulator NrdR YP_002573382.1 KEGG: csc:Csac_2058 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein YP_002573383.1 PFAM: ABC-2 type transporter; KEGG: csc:Csac_2188 ABC-2 type transporter YP_002573384.1 KEGG: csc:Csac_2189 ABC transporter related YP_002573385.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2189 ABC transporter related YP_002573386.1 PFAM: secretion protein HlyD family protein; KEGG: csc:Csac_2190 secretion protein HlyD family protein YP_002573387.1 PFAM: regulatory protein TetR; KEGG: csc:Csac_2191 TetR family transcriptional regulator YP_002573388.1 PFAM: protein of unknown function UPF0047; KEGG: csc:Csac_2192 hypothetical protein YP_002573389.1 PFAM: nitroreductase; KEGG: csc:Csac_2193 nitroreductase YP_002573390.1 KEGG: cth:Cthe_1773 peptidase S16, lon-like protein YP_002573391.1 KEGG: csc:Csac_2196 hypothetical protein YP_002573392.1 KEGG: csc:Csac_2197 hypothetical protein YP_002573393.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: csc:Csac_2198 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002573394.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: csc:Csac_2199 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002573395.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_2200 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002573396.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_2201 ABC transporter related YP_002573397.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_2202 ABC transporter related YP_002573398.1 KEGG: csc:Csac_2203 hypothetical protein YP_002573399.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: csc:Csac_2204 ribosomal protein L7/L12 YP_002573400.1 PFAM: ribosomal protein L10; KEGG: csc:Csac_2205 ribosomal protein L10 YP_002573401.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002573402.1 binds directly to 23S ribosomal RNA YP_002573403.1 KEGG: csc:Csac_2208 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein YP_002573404.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: csc:Csac_2209 preprotein translocase, SecE subunit YP_002573405.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif YP_002573406.1 PFAM: Domain of unknown function DUF1858; KEGG: csc:Csac_2222 hypothetical protein YP_002573407.1 KEGG: csc:Csac_2223 hypothetical protein YP_002573408.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: csc:Csac_2224 GntR family transcriptional regulator YP_002573409.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_002573410.1 KEGG: csc:Csac_2226 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_002573411.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: csc:Csac_2227 carbamoyl-phosphate synthase, small subunit YP_002573412.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; RimK domain protein ATP-grasp; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: csc:Csac_2228 carbamoyl-phosphate synthase, large subunit YP_002573413.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_002573414.1 KEGG: csc:Csac_1760 hypothetical protein YP_002573415.1 PFAM: peptidase M29 aminopeptidase II; KEGG: csc:Csac_1759 peptidase M29, aminopeptidase II YP_002573416.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: csc:Csac_1758 pseudouridine synthase YP_002573417.1 TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein; THUMP domain protein; ExsB family protein; KEGG: csc:Csac_1757 thiamine biosynthesis/tRNA modification protein ThiI YP_002573418.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: csc:Csac_1756 aminotransferase, class V YP_002573419.1 PFAM: protein of unknown function DUF558; KEGG: csc:Csac_1755 hypothetical protein YP_002573420.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_002573421.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_002573422.1 KEGG: csc:Csac_1752 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_002573423.1 PFAM: GrpE protein; KEGG: csc:Csac_1751 GrpE protein YP_002573424.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: csc:Csac_1750 heat-inducible transcription repressor HrcA YP_002573425.1 KEGG: csc:Csac_1749 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002573426.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002573427.1 KEGG: csc:Csac_1747 poly-gamma-glutamate biosynthesis protein YP_002573428.1 PFAM: pseudouridine synthase; KEGG: csc:Csac_1746 pseudouridine synthase YP_002573429.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_1745 glycosyl transferase, group 1 YP_002573430.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: csc:Csac_1744 serine-type D-Ala-D-Ala carboxypeptidase YP_002573431.1 TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; KEGG: csc:Csac_1743 cell wall hydrolase, SleB YP_002573432.1 KEGG: csc:Csac_1742 hypothetical protein YP_002573433.1 PFAM: ferric-uptake regulator; KEGG: csc:Csac_1741 ferric uptake regulator family protein YP_002573434.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; KEGG: csc:Csac_1740 small GTP-binding protein YP_002573435.1 PFAM: FeoA family protein; KEGG: csc:Csac_1739 FeoA family protein YP_002573436.1 KEGG: csc:Csac_0669 hypothetical protein YP_002573437.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: csc:Csac_0668 hypothetical protein YP_002573438.1 KEGG: csc:Csac_0666 hypothetical protein YP_002573439.1 PFAM: nitroreductase; KEGG: csc:Csac_0665 nitroreductase YP_002573440.1 PFAM: glycoside hydrolase family 28; SMART: Parallel beta-helix repeat; KEGG: csc:Csac_0664 glycoside hydrolase family protein YP_002573441.1 KEGG: fno:Fnod_1731 PilT domain-containing protein YP_002573442.1 KEGG: csc:Csac_0661 hypothetical protein YP_002573443.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0660 ABC transporter related YP_002573444.1 PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0659 hypothetical protein YP_002573445.1 KEGG: csc:Csac_0658 hypothetical protein YP_002573446.1 KEGG: csc:Csac_0657 hypothetical protein YP_002573447.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_0655 ABC transporter related YP_002573448.1 PFAM: Abortive infection protein; KEGG: csc:Csac_0654 abortive infection protein YP_002573449.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_0653 arylsulfatase regulator (Fe-S oxidoreductase)-like protein YP_002573451.1 PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0122 ABC transporter, permease protein YP_002573452.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0646 ABC transporter related YP_002573453.1 PFAM: regulatory protein TetR; KEGG: csc:Csac_0645 TetR family transcriptional regulator YP_002573454.1 KEGG: csc:Csac_0641 hypothetical protein YP_002573455.1 PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: csc:Csac_0636 hypothetical protein YP_002573456.1 KEGG: csc:Csac_0635 hypothetical protein YP_002573457.1 KEGG: csc:Csac_0634 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_002573458.1 PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sul:SYO3AOP1_0336 tetratricopeptide TPR_2 repeat protein YP_002573460.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: lsp:Bsph_2936 cell division cycle protein 48-like protein YP_002573461.1 KEGG: csc:Csac_0308 hypothetical protein YP_002573462.1 KEGG: csc:Csac_0569 hypothetical protein YP_002573463.1 KEGG: csc:Csac_0633 ATP-dependent OLD family endonuclease YP_002573465.1 PFAM: protein of unknown function DUF262; KEGG: mja:MJ0686 hypothetical protein YP_002573466.1 PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase domain protein; KEGG: cyb:CYB_1727 SNF2 family helicase YP_002573467.1 PFAM: protein of unknown function DUF1156; KEGG: cyb:CYB_1724 hypothetical protein YP_002573468.1 KEGG: noc:Noc_0547 hypothetical protein YP_002573469.1 KEGG: rba:RB452 hypothetical protein YP_002573470.1 PFAM: UvrD/REP helicase; KEGG: spx:SPG_1254 ATP-dependent DNA helicase YP_002573471.1 KEGG: bcl:ABC1399 hypothetical protein YP_002573472.1 KEGG: amr:AM1_6056 hypothetical protein YP_002573474.1 PFAM: NERD domain protein; KEGG: fjo:Fjoh_3691 NERD domain-containing protein YP_002573475.1 KEGG: csc:Csac_0632 hypothetical protein YP_002573476.1 KEGG: csc:Csac_0631 hypothetical protein YP_002573477.1 KEGG: csc:Csac_0630 nucleic acid binding protein YP_002573478.1 KEGG: csc:Csac_0629 hypothetical protein YP_002573479.1 KEGG: csc:Csac_0631 hypothetical protein YP_002573480.1 PFAM: Circadian clock protein KaiC central region; KEGG: csc:Csac_1738 putative circadian clock protein, KaiC YP_002573481.1 KEGG: csc:Csac_1737 hypothetical protein YP_002573482.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: csc:Csac_1736 cysteine synthase A YP_002573483.1 KEGG: csc:Csac_1735 hypothetical protein YP_002573484.1 PFAM: ABC-1 domain protein; KEGG: csc:Csac_1734 hypothetical protein YP_002573485.1 KEGG: csc:Csac_1733 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase ; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1 YP_002573486.1 PFAM: protein of unknown function DUF34; KEGG: csc:Csac_1732 hypothetical protein YP_002573487.1 PFAM: protein of unknown function DUF633; KEGG: csc:Csac_1731 hypothetical protein YP_002573489.1 KEGG: csc:Csac_1730 hypothetical protein YP_002573490.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_1729 glycosyl transferase, group 1 YP_002573491.1 PFAM: protein of unknown function DUF156; KEGG: csc:Csac_1728 hypothetical protein YP_002573492.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: csc:Csac_1727 thioredoxin YP_002573493.1 PFAM: protein of unknown function DUF541; KEGG: csc:Csac_1726 hypothetical protein YP_002573494.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csc:Csac_1725 AraC family transcriptional regulator YP_002573495.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: csc:Csac_1724 hypothetical protein YP_002573496.1 KEGG: csc:Csac_1723 hypothetical protein YP_002573497.1 PFAM: Heme NO binding domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: csc:Csac_1722 methyl-accepting chemotaxis sensory transducer YP_002573498.1 KEGG: csc:Csac_1721 hypothetical protein YP_002573499.1 PFAM: Lytic transglycosylase catalytic; KEGG: csc:Csac_1720 lytic transglycosylase, catalytic YP_002573501.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_002573502.1 PFAM: protein of unknown function DUF111; KEGG: csc:Csac_1717 hypothetical protein YP_002573503.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: csc:Csac_1716 NCAIR mutase (PurE)-related protein YP_002573504.1 KEGG: csc:Csac_1715 PP family ATPase YP_002573505.1 PFAM: Aldose 1-epimerase; KEGG: csc:Csac_1714 aldose 1-epimerase YP_002573506.1 KEGG: csc:Csac_1713 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein YP_002573507.1 KEGG: csc:Csac_1712 hypothetical protein YP_002573508.1 KEGG: csc:Csac_1711 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_002573509.1 KEGG: csc:Csac_1710 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; MutS III domain protein YP_002573510.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_1709 DNA polymerase beta subunit YP_002573511.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_002573512.1 KEGG: csc:Csac_1707 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase YP_002573513.1 KEGG: csc:Csac_1706 hypothetical protein YP_002573514.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: csc:Csac_1705 2'-5' RNA ligase YP_002573515.1 PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_1704 hypothetical protein YP_002573516.1 KEGG: csc:Csac_1703 hypothetical protein YP_002573517.1 KEGG: csc:Csac_1702 hypothetical protein YP_002573518.1 KEGG: csc:Csac_1701 hypothetical protein YP_002573519.1 TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: csc:Csac_1700 flagellar protein FliS YP_002573520.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: csc:Csac_1699 flagellar hook-associated 2 domain-containing protein YP_002573521.1 PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein YP_002573522.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_1696 DNA polymerase beta subunit YP_002573523.1 KEGG: csc:Csac_1694 hypothetical protein YP_002573524.1 KEGG: csc:Csac_1692 hypothetical protein YP_002573525.1 KEGG: pdi:BDI_2712 adenine-specific DNA methylase YP_002573526.1 KEGG: bad:BAD_1282 restriction endonuclease RKpn2kI YP_002573527.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: ENSAPMG00000013516. YP_002573530.1 KEGG: cpf:CPF_0954 hypothetical protein YP_002573531.1 PFAM: flagellin domain protein; KEGG: tpd:Teth39_1779 flagellin domain-containing protein YP_002573532.1 KEGG: tte:TTE0663 hypothetical protein YP_002573533.1 KEGG: csc:Csac_1674 AAA family ATPase YP_002573534.1 PFAM: protein of unknown function DUF86; KEGG: csc:Csac_1673 hypothetical protein YP_002573535.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_1672 DNA polymerase beta subunit YP_002573536.1 TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: csc:Csac_1671 carbon storage regulator, CsrA YP_002573537.1 binds to flagellin and appears to stabilize flagellin during flagella assembly YP_002573538.1 PFAM: protein of unknown function DUF86; KEGG: csc:Csac_1669 hypothetical protein YP_002573539.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_1667 DNA polymerase beta subunit YP_002573540.1 KEGG: csc:Csac_1666 hypothetical protein YP_002573541.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook YP_002573542.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_002573543.1 PFAM: FlgN family protein; KEGG: csc:Csac_1663 hypothetical protein YP_002573544.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: csc:Csac_1662 anti-sigma-28 factor, FlgM YP_002573545.1 KEGG: csc:Csac_1661 hypothetical protein YP_002573546.1 PFAM: phosphoribosyltransferase; KEGG: csc:Csac_1660 phosphoribosyltransferase YP_002573547.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: csc:Csac_1659 FliA/WhiG family RNA polymerase sigma factor YP_002573548.1 binds to sigma F preventing its association with RNA polymerase during sporulation YP_002573549.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: csc:Csac_1657 anti-sigma-factor antagonist YP_002573550.1 PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2212 hypothetical protein YP_002573551.1 PFAM: protein of unknown function DUF218; KEGG: tte:TTE2177 hypothetical protein YP_002573552.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_002573553.1 PFAM: cobalt transport protein; KEGG: csc:Csac_1764 cobalt transport protein YP_002573554.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1763 ABC transporter related YP_002573555.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1762 ABC transporter related YP_002573556.1 KEGG: csc:Csac_1761 hypothetical protein YP_002573557.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_002573558.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002573559.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: csc:Csac_2232 phosphoribosylanthranilate isomerase YP_002573560.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: csc:Csac_2233 indole-3-glycerol-phosphate synthase YP_002573561.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002573562.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: csc:Csac_2235 glutamine amidotransferase of anthranilate synthase YP_002573563.1 PFAM: Chorismate binding-like; KEGG: csc:Csac_2236 anthranilate synthase YP_002573564.1 PFAM: peptidase M24; creatinase; KEGG: csc:Csac_2237 peptidase M24 YP_002573565.1 KEGG: csc:Csac_2238 3-dehydroquinate dehydratase, type II; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_002573566.1 PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; KEGG: csc:Csac_2239 xylose isomerase domain-containing protein YP_002573567.1 PFAM: shikimate kinase; KEGG: csc:Csac_2240 shikimate kinase YP_002573568.1 KEGG: csc:Csac_2241 hypothetical protein YP_002573569.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_002573570.1 KEGG: csc:Csac_2243 hypothetical protein YP_002573571.1 KEGG: csc:Csac_2244 hypothetical protein YP_002573572.1 KEGG: csc:Csac_2245 hypothetical protein YP_002573573.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2246 ABC transporter related YP_002573574.1 KEGG: csc:Csac_2247 hypothetical protein YP_002573575.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: csc:Csac_2248 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002573576.1 TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_2249 pyruvate/ketoisovalerate oxidoreductase, gamma subunit YP_002573577.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: csc:Csac_2250 tRNA adenylyltransferase YP_002573578.1 KEGG: csc:Csac_2251 HisJ family histidinol phosphate phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_002573579.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002573580.1 TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein; KEGG: csc:Csac_2253 NifU domain-containing protein YP_002573581.1 TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: csc:Csac_2254 aminotransferase, class V YP_002573582.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: csc:Csac_2255 BadM/Rrf2 family transcriptional regulator YP_002573583.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002573584.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002573585.1 KEGG: csc:Csac_2260 ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_002573586.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002573587.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002573588.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: csc:Csac_2263 ribosomal protein L36 YP_002573589.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_002573590.1 KEGG: csc:Csac_2265 hypothetical protein YP_002573591.1 KEGG: csc:Csac_2266 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_002573592.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_002573593.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: csc:Csac_2268 preprotein translocase, SecY subunit YP_002573594.1 late assembly protein YP_002573595.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_002573596.1 binds 5S rRNA along with protein L5 and L25 YP_002573597.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002573598.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002573599.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_002573600.1 PFAM: ribosomal protein L5; KEGG: csc:Csac_2275 ribosomal protein L5 YP_002573601.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002573602.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002573603.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_002573604.1 one of the stabilizing components for the large ribosomal subunit YP_002573605.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002573606.1 KEGG: csc:Csac_2281 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein YP_002573607.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002573608.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002573609.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002573610.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_002573611.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002573612.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002573613.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002573614.1 KEGG: csc:Csac_2290 hypothetical protein YP_002573615.1 PFAM: Ferritin Dps family protein; KEGG: csc:Csac_2291 rubrerythrin YP_002573616.1 KEGG: csc:Csac_2292 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002573617.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: csc:Csac_2293 integral membrane sensor signal transduction histidine kinase YP_002573618.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: csc:Csac_2294 two component transcriptional regulator YP_002573619.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: csc:Csac_2295 phosphoglucomutase YP_002573620.1 PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_2298 major facilitator transporter YP_002573621.1 catalyzes the removal of amino acids from the N termini of peptides YP_002573622.1 PFAM: natural resistance-associated macrophage protein; KEGG: csc:Csac_2300 natural resistance-associated macrophage protein YP_002573623.1 KEGG: csc:Csac_2301 hypothetical protein YP_002573624.1 PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: csc:Csac_2302 radical SAM domain-containing protein YP_002573625.1 PFAM: protein of unknown function DUF156; KEGG: csc:Csac_2305 hypothetical protein YP_002573626.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_2306 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002573627.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: csc:Csac_2307 2-alkenal reductase YP_002573628.1 KEGG: csc:Csac_2308 hypothetical protein YP_002573629.1 PFAM: putative RNA methylase; KEGG: csc:Csac_2310 putative RNA methylase YP_002573630.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: csc:Csac_2311 TrpR like protein, YerC/YecD YP_002573631.1 PFAM: Sporulation protein YtxC; KEGG: csc:Csac_2312 hypothetical protein YP_002573632.1 KEGG: csc:Csac_2313 hypothetical protein YP_002573633.1 PFAM: protein of unknown function DUF1393; KEGG: csc:Csac_2314 hypothetical protein YP_002573634.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: cbe:Cbei_4828 methyl-accepting chemotaxis sensory transducer YP_002573635.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: csc:Csac_0808 putative CheW protein YP_002573636.1 PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; SMART: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; KEGG: csc:Csac_0809 CheA signal transduction histidine kinase YP_002573637.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cbe:Cbei_4020 response regulator receiver protein YP_002573638.1 TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; KEGG: csc:Csac_2315 inosine guanosine and xanthosine phosphorylase family protein YP_002573639.1 TIGRFAM: phosphopentomutase; PFAM: Phosphopentomutase domain protein; metalloenzyme domain protein; KEGG: csc:Csac_2316 phosphopentomutase YP_002573640.1 KEGG: csc:Csac_2317 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_002573641.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; KEGG: csc:Csac_2318 pyrimidine-nucleoside phosphorylase YP_002573642.1 KEGG: tpd:Teth39_2251 hypothetical protein YP_002573643.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: csc:Csac_2319 cytidine deaminase YP_002573644.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: csc:Csac_2320 GntR family transcriptional regulator YP_002573645.1 PFAM: inner-membrane translocator; KEGG: csc:Csac_2321 inner-membrane translocator YP_002573646.1 PFAM: inner-membrane translocator; KEGG: csc:Csac_2322 inner-membrane translocator YP_002573647.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2324 ABC transporter related YP_002573648.1 TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: csc:Csac_2325 methylthioadenosine phosphorylase YP_002573649.1 PFAM: basic membrane lipoprotein; KEGG: csc:Csac_2326 basic membrane lipoprotein YP_002573650.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: csc:Csac_2327 glutamine amidotransferase YP_002573651.1 PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: csc:Csac_2328 hypothetical protein YP_002573652.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: csc:Csac_2329 tyrosine recombinase XerD YP_002573653.1 KEGG: csc:Csac_2330 hypothetical protein YP_002573654.1 KEGG: csc:Csac_2331 hypothetical protein YP_002573655.1 TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; KEGG: csc:Csac_2332 stage II sporulation P family protein YP_002573656.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination YP_002573657.1 KEGG: csc:Csac_2334 hypothetical protein YP_002573658.1 TIGRFAM: germination protein YpeB; PFAM: Propeptide PepSY amd peptidase M4; KEGG: csc:Csac_2335 hypothetical protein YP_002573659.1 PFAM: cell wall hydrolase SleB; KEGG: csc:Csac_2336 cell wall hydrolase, SleB YP_002573660.1 PFAM: Monogalactosyldiacylglycerol synthase; glycosyl transferase group 1; Glycosyltransferase 28 domain; KEGG: csc:Csac_2337 monogalactosyldiacylglycerol synthase YP_002573661.1 PFAM: Peptidase M23; KEGG: csc:Csac_2338 peptidase M23B YP_002573662.1 KEGG: csc:Csac_2339 hypothetical protein YP_002573663.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: csc:Csac_2340 hypothetical protein YP_002573664.1 KEGG: csc:Csac_2341 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_002573665.1 PFAM: Peptidase M23; KEGG: csc:Csac_2342 peptidase M23B YP_002573666.1 PFAM: protein of unknown function DUF214; KEGG: csc:Csac_2343 hypothetical protein YP_002573667.1 KEGG: csc:Csac_2344 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase YP_002573668.1 KEGG: csc:Csac_2345 transcriptional regulator, CdaR YP_002573669.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: csc:Csac_2346 ABC transporter related YP_002573670.1 PFAM: Transglycosylase-associated protein; KEGG: csc:Csac_2347 transglycosylase-associated protein YP_002573671.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: csc:Csac_2348 thiamine pyrophosphokinase YP_002573672.1 KEGG: csc:Csac_2349 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: Exonuclease; phosphoesterase PHP domain protein YP_002573673.1 PFAM: glycosyl transferase family 2; KEGG: csc:Csac_2350 glycosyl transferase family protein YP_002573674.1 KEGG: csc:Csac_2351 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_002573675.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: csc:Csac_2352 putative membrane-associated zinc metalloprotease YP_002573676.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_002573677.1 PFAM: phosphatidate cytidylyltransferase; KEGG: csc:Csac_2354 phosphatidate cytidylyltransferase YP_002573678.1 KEGG: csc:Csac_2355 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_002573679.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002573680.1 Catalyzes the phosphorylation of UMP to UDP YP_002573681.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002573682.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002573684.1 KEGG: csc:Csac_2360 GDP-mannose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002573685.1 KEGG: csc:Csac_2361 hypothetical protein YP_002573686.1 KEGG: csc:Csac_2362 hypothetical protein YP_002573687.1 KEGG: csc:Csac_2363 hypothetical protein YP_002573688.1 PFAM: O-antigen polymerase; KEGG: csc:Csac_2364 O-antigen polymerase YP_002573689.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: csc:Csac_2365 fibronectin-binding A domain-containing protein YP_002573690.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_002573691.1 PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: csc:Csac_2367 ATPase YP_002573692.1 PFAM: ATP:guanido phosphotransferase; KEGG: csc:Csac_2368 ATP:guanido phosphotransferase YP_002573693.1 PFAM: UvrB/UvrC protein; KEGG: csc:Csac_2369 UvrB/UvrC protein YP_002573694.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: csc:Csac_2370 transcriptional repressor, CtsR YP_002573695.1 PFAM: polysaccharide deacetylase; KEGG: csc:Csac_2371 polysaccharide deacetylase YP_002573696.1 KEGG: csc:Csac_2372 hypothetical protein YP_002573697.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002573698.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: csc:Csac_2374 metal dependent phosphohydrolase YP_002573699.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_002573700.1 PFAM: Bacitracin resistance protein BacA; KEGG: csc:Csac_2376 putative undecaprenol kinase YP_002573701.1 KEGG: csc:Csac_2377 uncharacterized membrane protein YP_002573702.1 PFAM: SNARE associated Golgi protein; KEGG: csc:Csac_2378 uncharacterized membrane-associated protein YP_002573703.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: csc:Csac_2379 acetylornithine and succinylornithine aminotransferase YP_002573704.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: csc:Csac_2380 phage SPO1 DNA polymerase-related protein YP_002573705.1 PFAM: S-layer domain protein; KEGG: csc:Csac_2381 S-layer domain-containing protein YP_002573706.1 PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: csc:Csac_2382 GAF domain-containing protein YP_002573707.1 KEGG: csc:Csac_2383 beta-lactamase superfamily hydrolase YP_002573708.1 KEGG: csc:Csac_2385 hypothetical protein YP_002573709.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide domain protein; AAA ATPase; KEGG: csc:Csac_2386 putative adenylate/guanylate cyclase YP_002573710.1 KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002573711.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: csc:Csac_2105 IstB ATP binding domain-containing protein YP_002573712.1 KEGG: csc:Csac_2714 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_002573713.1 KEGG: csc:Csac_2714 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_002573714.1 PFAM: type 3a cellulose-binding domain protein; FG-GAP repeat protein; KEGG: cth:Cthe_0246 carbohydrate-binding family 6 protein YP_002573715.1 PFAM: Pectate lyase; KEGG: scl:sce4938 pectate lyase YP_002573716.1 KEGG: cpy:Cphy_1888 hypothetical protein YP_002573717.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cpy:Cphy_2734 AraC family transcriptional regulator YP_002573718.1 PFAM: glycoside hydrolase family 48; type 3a cellulose-binding domain protein; glycoside hydrolase family 10; SMART: glycoside hydrolase family 10; KEGG: csc:Csac_1076 glycoside hydrolase family protein YP_002573720.1 PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; KEGG: csc:Csac_1077 glycoside hydrolase family protein YP_002573721.1 PFAM: glycoside hydrolase family 48; type 3a cellulose-binding domain protein; Kelch repeat-containing protein; glycosyl hydrolase BNR repeat-containing protein; KEGG: csc:Csac_1076 glycoside hydrolase family protein YP_002573722.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: csc:Csac_1084 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002573723.1 PFAM: KWG Leptospira repeat protein; KEGG: csc:Csac_1083 hypothetical protein YP_002573724.1 KEGG: csc:Csac_1082 hypothetical protein YP_002573725.1 PFAM: glycosyl transferase family 39; KEGG: csc:Csac_1081 glycosyl transferase family protein YP_002573726.1 PFAM: glycoside hydrolase family 9; glycoside hydrolase family 5; type 3a cellulose-binding domain protein; KEGG: csc:Csac_1079 cellulose 1,4-beta-cellobiosidase YP_002573727.1 PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; KEGG: csc:Csac_1077 glycoside hydrolase family protein YP_002573728.1 PFAM: glycoside hydrolase family 48; type 3a cellulose-binding domain protein; glycoside hydrolase family 9; KEGG: csc:Csac_1076 glycoside hydrolase family protein YP_002573729.1 KEGG: csc:Csac_0308 hypothetical protein YP_002573730.1 PFAM: NHL repeat containing protein; low-density lipoprotein receptor YWTD repeat; SMART: low-density lipoprotein receptor YWTD repeat; KEGG: mba:Mbar_A0416 hypothetical protein YP_002573731.1 KEGG: csc:Csac_1074 hypothetical protein YP_002573732.1 KEGG: csc:Csac_1073 hypothetical protein YP_002573733.1 KEGG: csc:Csac_1072 hypothetical protein YP_002573734.1 KEGG: csc:Csac_1071 hypothetical protein YP_002573735.1 PFAM: Fimbrial assembly family protein; KEGG: csc:Csac_1070 fimbrial assembly family protein YP_002573736.1 KEGG: csc:Csac_1069 Tfp pilus assembly protein ATPase PilM-like protein YP_002573737.1 KEGG: csc:Csac_1068 hypothetical protein YP_002573738.1 KEGG: csc:Csac_1067 hypothetical protein YP_002573739.1 KEGG: csc:Csac_1066 hypothetical protein YP_002573740.1 PFAM: peptidase A24A domain protein; KEGG: csc:Csac_1065 peptidase A24A domain-containing protein YP_002573741.1 KEGG: csc:Csac_1064 hypothetical protein YP_002573742.1 KEGG: csc:Csac_1063 hypothetical protein YP_002573743.1 PFAM: type II secretion system protein; KEGG: csc:Csac_1062 type II secretion system protein YP_002573744.1 KEGG: csc:Csac_1061 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_002573745.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: csc:Csac_1060 type II secretion system protein E YP_002573746.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: csc:Csac_1059 response regulator receiver protein YP_002573747.1 KEGG: csc:Csac_1058 hypothetical protein YP_002573748.1 KEGG: csc:Csac_2704 hypothetical protein YP_002573749.1 KEGG: csc:Csac_1056 GtrA family protein YP_002573750.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: csc:Csac_1055 shikimate 5-dehydrogenase YP_002573751.1 TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: csc:Csac_1054 HAD family phosphatase YP_002573752.1 KEGG: csc:Csac_1053 hypothetical protein YP_002573753.1 PFAM: NLP/P60 protein; SH3 type 3 domain protein; protein of unknown function DUF1058; SMART: SH3 domain protein; KEGG: csc:Csac_1052 NLP/P60 protein YP_002573754.1 PFAM: protein of unknown function DUF1121; KEGG: csc:Csac_1051 hypothetical protein YP_002573755.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1050 ABC transporter related YP_002573756.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: csc:Csac_1049 transport system permease protein YP_002573757.1 PFAM: periplasmic binding protein; KEGG: csc:Csac_1048 periplasmic binding protein YP_002573758.1 PFAM: glycine cleavage H-protein; KEGG: csc:Csac_1047 glycine cleavage H-protein YP_002573759.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; Redoxin domain protein; KEGG: csc:Csac_1046 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002573760.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: csc:Csac_1045 cytochrome c biogenesis protein, transmembrane region YP_002573761.1 KEGG: csc:Csac_1044 hypothetical protein YP_002573762.1 PFAM: PemK family protein; KEGG: csc:Csac_1043 transcriptional modulator of MazE/toxin, MazF YP_002573763.1 KEGG: csc:Csac_1042 hypothetical protein YP_002573764.1 KEGG: csc:Csac_1041 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_002573765.1 KEGG: csc:Csac_1040 hypothetical protein YP_002573766.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: csc:Csac_1039 carbohydrate kinase, YjeF related protein YP_002573767.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: csc:Csac_1038 holo-acyl-carrier-protein synthase YP_002573769.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: csc:Csac_1037 SNO glutamine amidotransferase YP_002573770.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002573771.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: csc:Csac_1035 GntR family transcriptional regulator YP_002573772.1 KEGG: csc:Csac_1034 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002573773.1 KEGG: csc:Csac_1033 hypothetical protein YP_002573774.1 PFAM: extracellular solute-binding protein family 5; KEGG: csc:Csac_1032 extracellular solute-binding protein YP_002573775.1 KEGG: csc:Csac_1031 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_002573776.1 KEGG: csc:Csac_1030 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_002573777.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1029 binding-protein-dependent transport systems inner membrane component YP_002573778.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1028 nickel-transporting ATPase YP_002573779.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: csc:Csac_1027 L-lactate dehydrogenase YP_002573780.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002573781.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: csc:Csac_1025 DNA polymerase III, delta subunit YP_002573782.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: csc:Csac_1024 DNA internalization-related competence protein ComEC/Rec2 YP_002573783.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: csc:Csac_1023 phosphotransferase domain-containing protein YP_002573784.1 PFAM: FAD dependent oxidoreductase; KEGG: csc:Csac_1022 FAD dependent oxidoreductase YP_002573785.1 KEGG: csc:Csac_1021 hypothetical protein YP_002573786.1 KEGG: csc:Csac_1020 hypothetical protein YP_002573787.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_1019 radical SAM domain-containing protein YP_002573788.1 PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: csc:Csac_1018 beta-galactosidase YP_002573789.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; KEGG: csc:Csac_0831 transposase, putative YP_002573790.1 KEGG: csc:Csac_1016 hypothetical protein YP_002573791.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: csc:Csac_0637 regulatory protein, ArsR YP_002573792.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: csc:Csac_0638 protein tyrosine phosphatase YP_002573793.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: chy:CHY_1093 arsenical-resistance protein YP_002573794.1 KEGG: tex:Teth514_0247 heterodisulfide reductase subunit A and related polyferredoxins-like protein YP_002573795.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tpd:Teth39_1967 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002573796.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: tpd:Teth39_1968 ArsR family transcriptional regulator YP_002573797.1 TIGRFAM: C_GCAxxG_C_C family protein; KEGG: dth:DICTH_1787 redox family protein YP_002573798.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: csc:Csac_1014 beta-lactamase domain-containing protein YP_002573799.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: csc:Csac_1013 hypothetical protein YP_002573800.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1012 ABC transporter related YP_002573801.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1011 polar amino acid ABC transporter, inner membrane subunit YP_002573802.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: csc:Csac_1010 extracellular solute-binding protein YP_002573803.1 PFAM: S-layer domain protein; KEGG: csc:Csac_1009 S-layer domain-containing protein YP_002573804.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: csc:Csac_1008 fibronectin, type III domain-containing protein YP_002573805.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: csc:Csac_1007 fibronectin, type III domain-containing protein YP_002573806.1 KEGG: csc:Csac_1006 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_002573807.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_1005 radical SAM domain-containing protein YP_002573808.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_002573809.1 PFAM: beta-lactamase domain protein; KEGG: csc:Csac_1003 beta-lactamase domain-containing protein YP_002573810.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_002573811.1 KEGG: csc:Csac_1001 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002573812.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_002573813.1 KEGG: csc:Csac_0999 hypothetical protein YP_002573814.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: csc:Csac_0998 spore germination B3 GerAC family protein YP_002573815.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: csc:Csac_0997 spore germination protein YP_002573816.1 PFAM: GerA spore germination protein; KEGG: csc:Csac_0996 GerA spore germination protein YP_002573817.1 KEGG: amt:Amet_4601 hypothetical protein YP_002573818.1 PFAM: amino acid-binding ACT domain protein; KEGG: csc:Csac_0995 hypothetical protein YP_002573819.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: csc:Csac_0993 homoserine dehydrogenase YP_002573820.1 TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: csc:Csac_0992 homoserine kinase YP_002573821.1 KEGG: csc:Csac_0991 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_002573822.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cth:Cthe_1685 ABC transporter related protein YP_002573824.1 KEGG: bcz:BCZK2723 hypothetical protein YP_002573825.1 KEGG: nth:Nther_0486 hypothetical protein YP_002573827.1 KEGG: cth:Cthe_1689 hypothetical protein YP_002573828.1 PFAM: Radical SAM domain protein; KEGG: cbe:Cbei_2008 radical SAM domain protein YP_002573830.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_1690 radical SAM family protein YP_002573831.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: csc:Csac_2701 xylose isomerase domain-containing protein YP_002573832.1 KEGG: csc:Csac_2702 hypothetical protein YP_002573833.1 KEGG: csc:Csac_2703 hypothetical protein YP_002573834.1 KEGG: csc:Csac_2704 hypothetical protein YP_002573835.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_2705 GCN5-related N-acetyltransferase YP_002573836.1 PFAM: Coat F domain protein; KEGG: csc:Csac_2706 coat F domain-containing protein YP_002573838.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: csc:Csac_2707 ErfK/YbiS/YcfS/YnhG family protein YP_002573839.1 KEGG: csc:Csac_2708 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_002573840.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002573841.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002573842.1 KEGG: csc:Csac_2711 6-phosphogluconate dehydrogenase, NAD-binding YP_002573843.1 PFAM: Ferritin Dps family protein; KEGG: csc:Csac_2712 ferritin, Dps family protein YP_002573844.1 KEGG: csc:Csac_1446 hypothetical protein YP_002573845.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: bat:BAS0421 prophage LambdaBa04, DNA binding protein, putative YP_002573846.1 KEGG: csc:Csac_0308 hypothetical protein YP_002573847.1 PFAM: PilT protein domain protein; KEGG: csc:Csac_2495 hypothetical protein YP_002573848.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: csc:Csac_2496 hypothetical protein YP_002573849.1 KEGG: bfs:BF2029 putative ATP-binding protein YP_002573851.1 KEGG: bfs:BF2029 putative ATP-binding protein YP_002573852.1 KEGG: ckl:CKL_2011 hypothetical protein YP_002573853.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bpu:BPUM_3558 transcriptional regulator YP_002573854.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: lwe:lwe0350 phosphoglycerate dehydrogenase family protein YP_002573855.1 KEGG: csc:Csac_0349 ketose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_002573856.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: cdf:CD2812 putative gluconate permease YP_002573857.1 PFAM: carbohydrate kinase FGGY; KEGG: afu:AF1752 carbohydrate kinase YP_002573858.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type YP_002573861.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: csc:Csac_1412 hypothetical protein YP_002573862.1 KEGG: csc:Csac_1412 hypothetical protein YP_002573863.1 PFAM: YcfA family protein; KEGG: amt:Amet_3356 YcfA family protein YP_002573864.1 PFAM: protein of unknown function UPF0150; KEGG: csc:Csac_0501 hypothetical protein YP_002573865.1 KEGG: csc:Csac_0107 hypothetical protein YP_002573866.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type YP_002573867.1 KEGG: csc:Csac_1402 hypothetical protein YP_002573868.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: csc:Csac_1403 D12 class N6 adenine-specific DNA methyltransferase YP_002573869.1 KEGG: csc:Csac_2594 hypothetical protein YP_002573870.1 PFAM: protein of unknown function DUF87; KEGG: csc:Csac_2593 hypothetical protein YP_002573871.1 KEGG: csc:Csac_1444 radical SAM domain-containing protein YP_002573874.1 KEGG: csc:Csac_2618 hypothetical protein YP_002573876.1 PFAM: integrase family protein; KEGG: csc:Csac_2713 phage integrase family protein YP_002573877.1 KEGG: csc:Csac_2094 hypothetical protein YP_002573878.1 PFAM: glycoside hydrolase family 4; KEGG: csc:Csac_2748 glycoside hydrolase family protein YP_002573879.1 KEGG: bcl:ABC0558 sugar ABC transporter substrate-binding protein YP_002573880.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1251 protein LplC YP_002573881.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1250 protein LplB YP_002573882.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0358 ABC-type sugar transport system periplasmic component-like protein YP_002573883.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cpy:Cphy_2187 AraC family transcriptional regulator YP_002573884.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: csc:Csac_1377 ferredoxin-dependent glutamate synthase YP_002573885.1 KEGG: csc:Csac_1376 coenzyme F390 synthetase-like protein YP_002573886.1 KEGG: csc:Csac_1375 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_002573887.1 PFAM: Domain of unknown function DUF1934; KEGG: csc:Csac_1374 hypothetical protein YP_002573888.1 KEGG: csc:Csac_1373 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_002573889.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_002573890.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: csc:Csac_1371 phosphomannomutase YP_002573891.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_002573892.1 PFAM: protein of unknown function DUF901; KEGG: csc:Csac_1369 hypothetical protein YP_002573893.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: csc:Csac_1368 RNA methyltransferase YP_002573894.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor YP_002573895.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: csc:Csac_1366 primosome, DnaD subunit YP_002573896.1 acts to load the DnaB helicase onto the initiation site during DNA replication YP_002573897.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_002573898.1 PFAM: protein of unknown function DUF1646; KEGG: csc:Csac_1363 hypothetical protein YP_002573899.1 PFAM: ribonuclease III; KEGG: csc:Csac_1362 ribonuclease III YP_002573900.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: csc:Csac_1361 Orn/Lys/Arg decarboxylase, major region YP_002573901.1 PFAM: MgtC/SapB transporter; KEGG: csc:Csac_1360 MgtC/SapB transporter YP_002573902.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_1359 hypothetical protein YP_002573903.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1358 binding-protein-dependent transport systems inner membrane component YP_002573904.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1357 binding-protein-dependent transport systems inner membrane component YP_002573905.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: csc:Csac_1356 response regulator receiver protein YP_002573906.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_1355 integral membrane sensor signal transduction histidine kinase YP_002573907.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides YP_002573908.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csc:Csac_1353 AraC family transcriptional regulator YP_002573909.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: csc:Csac_1352 transketolase, central region YP_002573910.1 PFAM: Transketolase domain protein; KEGG: csc:Csac_1351 transketolase domain-containing protein YP_002573911.1 PFAM: protein of unknown function DUF161; KEGG: csc:Csac_1350 hypothetical protein YP_002573912.1 KEGG: csc:Csac_1349 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; polysaccharide pyruvyl transferase YP_002573913.1 PFAM: protein of unknown function DUF1540 YP_002573914.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1348 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002573915.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002573916.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_1346 glycosyl transferase, group 1 YP_002573917.1 PFAM: nitrogen regulatory protein P-II; KEGG: csc:Csac_1345 nitrogen regulatory protein P-II YP_002573918.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: csc:Csac_1344 ammonium transporter YP_002573919.1 forms a direct contact with the tRNA during translation YP_002573920.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002573921.1 KEGG: csc:Csac_1341 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_002573922.1 PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: csc:Csac_1340 alpha-L-fucosidase YP_002573923.1 catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose YP_002573924.1 KEGG: csc:Csac_1338 alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_002573925.1 KEGG: csc:Csac_1822 hypothetical protein YP_002573926.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: dth:DICTH_1894 hypothetical protein YP_002573927.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mtp:Mthe_0191 GDSL family lipase YP_002573928.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: tma:TM0425 oxidoreductase, putative YP_002573929.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU06990 hypothetical protein YP_002573930.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0317 lactose transport system YP_002573931.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU06970 hypothetical protein YP_002573932.1 PFAM: oxidoreductase domain protein; KEGG: tma:TM0426 PHT4-related protein YP_002573933.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tma:TM0436 alcohol dehydrogenase, zinc-containing YP_002573934.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: tle:Tlet_1879 succinate dehydrogenase YP_002573935.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dth:DICTH_0323 dihydroorotate dehydrogenase superfamily YP_002573936.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 sugar binding; KEGG: dth:DICTH_1429 beta-glucuronidase YP_002573937.1 PFAM: Integrase catalytic region; KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002573938.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002573939.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: cpe:CPE0147 beta-D-glucuronidase YP_002573940.1 KEGG: bsu:BSU07090 hypothetical protein YP_002573941.1 PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU07100 lipoprotein YP_002573942.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_002573943.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07110 transmembrane lipoprotein YP_002573944.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: bvu:BVU_0177 glycoside hydrolase family protein YP_002573945.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002573946.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: csc:Csac_1336 single-strand binding protein YP_002573947.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: csc:Csac_1335 ribosomal protein S6 YP_002573948.1 KEGG: csc:Csac_1333 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_002573949.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis YP_002573950.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis YP_002573951.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: csc:Csac_1327 putative CheW protein YP_002573953.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; helicase domain protein; KEGG: csc:Csac_1325 preprotein translocase, SecA subunit YP_002573954.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: csc:Csac_1324 sigma 54 modulation protein/ribosomal protein S30EA YP_002573955.1 PFAM: protein of unknown function DUF362; KEGG: csc:Csac_1323 hypothetical protein YP_002573956.1 KEGG: csc:Csac_1322 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_002573957.1 KEGG: csc:Csac_1321 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; RNA binding S1 domain protein YP_002573958.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: csc:Csac_1320 metal dependent phosphohydrolase YP_002573959.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; KEGG: csc:Csac_0831 transposase, putative YP_002573960.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: csc:Csac_1317 preprotein translocase, SecG subunit YP_002573961.1 KEGG: csc:Csac_1316 hypothetical protein YP_002573962.1 PFAM: KWG Leptospira repeat protein; KEGG: csc:Csac_0643 hypothetical protein YP_002573963.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_002573964.1 PFAM: protein of unknown function DUF711; KEGG: csc:Csac_1314 hypothetical protein YP_002573965.1 ACT domain-containing protein YP_002573966.1 PFAM: PfkB domain protein; KEGG: csc:Csac_1312 ribokinase-like domain-containing protein YP_002573967.1 KEGG: csc:Csac_1311 hypothetical protein YP_002573968.1 PFAM: Ig domain protein group 2 domain protein; Thrombospondin type 3 repeat; von Willebrand factor type A; SMART: von Willebrand factor type A; Parallel beta-helix repeat; Ig domain protein group 2 domain protein; KEGG: csc:Csac_1310 Ig domain-containing protein YP_002573969.1 KEGG: csc:Csac_1309 hypothetical protein YP_002573970.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_002573971.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_1306 Cof-like hydrolase YP_002573972.1 PFAM: conserved hypothetical protein; KEGG: csc:Csac_1305 hypothetical protein YP_002573973.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002573974.1 PFAM: aminotransferase class V; KEGG: csc:Csac_1303 aminotransferase, class V YP_002573975.1 KEGG: csc:Csac_1302 hypothetical protein YP_002573976.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002573977.1 KEGG: csc:Csac_1300 ribonuclease; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein YP_002573978.1 KEGG: csc:Csac_1299 hypothetical protein YP_002573979.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: csc:Csac_1298 radical SAM domain-containing protein YP_002573980.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: csc:Csac_1297 DegV family protein YP_002573981.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: csc:Csac_1296 RNA methyltransferase YP_002573982.1 PFAM: CheC domain protein; KEGG: csc:Csac_1295 CheC domain-containing protein YP_002573983.1 PFAM: protein of unknown function DUF362; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_1294 hypothetical protein YP_002573984.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: csc:Csac_1293 Cof-like hydrolase YP_002573985.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_002573986.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_002573987.1 PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csc:Csac_1290 helix-turn-helix domain-containing protein YP_002573988.1 KEGG: csc:Csac_1289 hypothetical protein YP_002573989.1 KEGG: csc:Csac_1288 hypothetical protein YP_002573990.1 KEGG: csc:Csac_1287 hypothetical protein YP_002573991.1 PFAM: protein of unknown function DUF342; KEGG: csc:Csac_1286 hypothetical protein YP_002573992.1 KEGG: csc:Csac_1285 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 3 domain protein YP_002573994.1 stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: csc:Csac_1284 chemoreceptor glutamine deamidase CheD YP_002573995.1 PFAM: CheC domain protein; KEGG: csc:Csac_1283 CheC, inhibitor of MCP methylation YP_002573996.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: csc:Csac_1282 putative CheW protein YP_002573997.1 PFAM: ATP-binding region ATPase domain protein; CheW domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_1281 CheA signal transduction histidine kinase YP_002573998.1 PFAM: type IV pilus assembly PilZ; KEGG: csc:Csac_1280 type IV pilus assembly PilZ YP_002573999.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: csc:Csac_1279 cobyrinic acid a,c-diamide synthase YP_002574000.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: csc:Csac_1278 GTP-binding signal recognition particle YP_002574001.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: cth:Cthe_0485 flagellar biosynthesis protein FlhA YP_002574002.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: csc:Csac_1276 flagellar biosynthetic protein FlhB YP_002574003.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: csc:Csac_1275 flagellar biosynthetic protein FliR YP_002574004.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: csc:Csac_1274 flagellar biosynthetic protein FliQ YP_002574005.1 KEGG: csc:Csac_1273 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_002574006.1 KEGG: csc:Csac_1272 hypothetical protein YP_002574007.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: csc:Csac_1271 response regulator receiver protein YP_002574008.1 One of three proteins involved in switching the direction of the flagellar rotation YP_002574009.1 TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: csc:Csac_1269 flagellar motor switch protein FliM YP_002574010.1 PFAM: flagellar basal body-associated protein FliL; KEGG: csc:Csac_1268 flagellar basal body-associated protein FliL YP_002574011.1 PFAM: flagellar FlbD family protein; KEGG: csc:Csac_1267 flagellar FlbD family protein YP_002574012.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; KEGG: csc:Csac_1266 hypothetical protein YP_002574013.1 TIGRFAM: flagellar operon protein; KEGG: csc:Csac_1265 flagellar operon protein YP_002574014.1 PFAM: flagellar hook capping protein; KEGG: csc:Csac_1264 flagellar hook capping protein YP_002574015.1 PFAM: flagellar hook-length control protein; KEGG: csc:Csac_1263 flagellar hook-length control protein YP_002574016.1 KEGG: csc:Csac_1262 hypothetical protein YP_002574017.1 TIGRFAM: flagellar export protein FliJ; KEGG: csc:Csac_1261 flagellar export protein FliJ YP_002574018.1 KEGG: csc:Csac_1260 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_002574019.1 KEGG: csc:Csac_1259 H+-transporting two-sector ATPase, E subunit YP_002574020.1 One of three proteins involved in switching the direction of the flagellar rotation YP_002574021.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: Flagellar M-ring domain protein; secretory protein YscJ/FliF family protein; KEGG: csc:Csac_1257 flagellar M-ring protein FliF YP_002574022.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: csc:Csac_1256 flagellar hook-basal body complex subunit FliE YP_002574023.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: csc:Csac_1255 flagellar basal-body rod protein FlgC YP_002574024.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: csc:Csac_1254 flagellar basal-body rod protein FlgB YP_002574025.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_002574026.1 heat shock protein involved in degradation of misfolded proteins YP_002574027.1 heat shock protein involved in degradation of misfolded proteins YP_002574028.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_002574029.1 KEGG: csc:Csac_1249 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_002574030.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: csc:Csac_1248 DNA protecting protein DprA YP_002574031.1 PFAM: protein of unknown function UPF0027; KEGG: csc:Csac_1247 hypothetical protein YP_002574032.1 PFAM: protein of unknown function DUF205; KEGG: csc:Csac_1246 hypothetical protein YP_002574033.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: csc:Csac_1245 radical SAM domain-containing protein YP_002574034.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: csc:Csac_1244 regulatory protein, ArsR YP_002574035.1 PFAM: VanZ family protein; KEGG: bwe:BcerKBAB4_1601 VanZ family protein YP_002574036.1 KEGG: bwe:BcerKBAB4_1602 hypothetical protein YP_002574037.1 PFAM: ferric-uptake regulator; KEGG: csc:Csac_1243 ferric uptake regulator family protein YP_002574038.1 PFAM: periplasmic solute binding protein; KEGG: csc:Csac_1242 periplasmic solute binding protein YP_002574039.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1241 ABC transporter related YP_002574040.1 PFAM: ABC-3 protein; inner-membrane translocator; KEGG: csc:Csac_1240 ABC-3 protein YP_002574041.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: csc:Csac_1239 Mg chelatase, subunit ChlI YP_002574042.1 PFAM: protein of unknown function DUF86; KEGG: chy:CHY_0070 hypothetical protein YP_002574043.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_1236 DNA polymerase beta subunit YP_002574044.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmo:Pmob_0440 GCN5-related N-acetyltransferase YP_002574045.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: csc:Csac_1232 tRNA pseudouridine synthase D, TruD YP_002574046.1 PFAM: protein of unknown function DUF43; KEGG: csc:Csac_1231 hypothetical protein YP_002574047.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: csc:Csac_1230 ribosomal protein L28 YP_002574048.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cth:Cthe_2484 transposase IS116/IS110/IS902 YP_002574050.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mla:Mlab_1047 hypothetical protein YP_002574051.1 KEGG: csc:Csac_1228 alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_002574052.1 KEGG: csc:Csac_1227 hypothetical protein YP_002574053.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: csc:Csac_1226 alcohol dehydrogenase YP_002574054.1 PFAM: aminotransferase class I and II; glycine hydroxymethyltransferase; aminotransferase class-III; Orn/Lys/Arg decarboxylase major region; aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: csc:Csac_1225 glycine C-acetyltransferase YP_002574055.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: csc:Csac_1224 formate--tetrahydrofolate ligase YP_002574056.1 KEGG: cth:Cthe_2252 thioesterase superfamily protein YP_002574057.1 PFAM: protein of unknown function DUF81; KEGG: csc:Csac_1158 hypothetical protein YP_002574058.1 PFAM: protein of unknown function DUF1634; KEGG: csc:Csac_1156 hypothetical protein YP_002574059.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: mja:MJ0762 C4-dicarboxylate transporter (mae1) YP_002574060.1 KEGG: csc:Csac_1155 esterase/lipase-like protein YP_002574061.1 PFAM: regulatory protein TetR; KEGG: csc:Csac_0734 TetR family transcriptional regulator YP_002574062.1 PFAM: ApbE family lipoprotein; KEGG: csc:Csac_0733 ApbE family lipoprotein YP_002574063.1 PFAM: aminotransferase class IV; KEGG: tex:Teth514_0616 aminotransferase, class IV YP_002574064.1 PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: tex:Teth514_0615 para-aminobenzoate synthase, subunit I YP_002574065.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: csc:Csac_0728 glutamine amidotransferase of anthranilate synthase YP_002574066.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_0727 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002574067.1 KEGG: csc:Csac_0726 hypothetical protein YP_002574068.1 PFAM: transposase IS4 family protein; KEGG: csc:Csac_2323 transposase, IS4 family protein YP_002574069.1 PFAM: KWG Leptospira repeat protein; KEGG: ctc:CTC01367 hypothetical protein YP_002574071.1 PFAM: pyruvate carboxyltransferase; KEGG: csc:Csac_0724 pyruvate carboxyltransferase YP_002574072.1 catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate YP_002574073.1 PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: csc:Csac_0722 regulatory protein GntR, HTH YP_002574074.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate YP_002574075.1 PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; KEGG: tye:THEYE_A2067 CheA YP_002574076.1 KEGG: tte:TTE1037 methylase of chemotaxis methyl-accepting proteins; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_002574077.1 PFAM: CheC domain protein; KEGG: swo:Swol_1446 CheX protein (uncharacterized ORF in chemotaxis operon) YP_002574078.1 KEGG: cbt:CLH_2698 putative chemotaxis sensory transduction protein YP_002574079.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pab:PAB1330 chemotaxis response regulator YP_002574080.1 KEGG: swo:Swol_1449 protein-glutamate methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver YP_002574081.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: swo:Swol_1450 chemotaxis signal transduction protein YP_002574082.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: tte:TTE1033 methyl-accepting chemotaxis protein YP_002574083.1 KEGG: cno:NT01CX_2347 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_002574084.1 KEGG: nth:Nther_2633 protein of unknown function UPF0236 YP_002574085.1 KEGG: csc:Csac_0720 hypothetical protein YP_002574086.1 PFAM: polysaccharide deacetylase; KEGG: csc:Csac_0719 polysaccharide deacetylase YP_002574087.1 PFAM: protein of unknown function DUF1680; KEGG: csc:Csac_0717 hypothetical protein YP_002574088.1 KEGG: csc:Csac_0715 amino acid transporter-like protein YP_002574089.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: csc:Csac_0711 iron-containing alcohol dehydrogenase YP_002574090.1 PFAM: helix-turn-helix HxlR type; KEGG: csc:Csac_0710 HxlR family transcriptional regulator YP_002574091.1 PFAM: AIG2 family protein; KEGG: csc:Csac_0709 hypothetical protein YP_002574092.1 PFAM: protein of unknown function DUF421; KEGG: fps:FP0745 hypothetical protein YP_002574093.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: afl:Aflv_1397 transcriptional regulator (GntR family) YP_002574094.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: drm:Dred_3242 ABC transporter related YP_002574095.1 KEGG: drm:Dred_3241 hypothetical protein YP_002574096.1 KEGG: csc:Csac_2646 plasmid stabilization system protein YP_002574097.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: csc:Csac_2645 prevent-host-death family protein YP_002574098.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002574099.1 TIGRFAM: serine O-acetyltransferase; KEGG: csc:Csac_0707 serine O-acetyltransferase YP_002574100.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002574101.1 KEGG: csc:Csac_1415 hypothetical protein YP_002574102.1 KEGG: tte:TTE1908 hypothetical protein YP_002574103.1 KEGG: tte:TTE1899 GTPase (dynamin-related) YP_002574104.1 PFAM: Dynamin family protein; GTP-binding protein HSR1-related; KEGG: tte:TTE1899 GTPase (dynamin-related) YP_002574105.1 KEGG: csc:Csac_0697 hypothetical protein YP_002574106.1 KEGG: csc:Csac_1686 hypothetical protein YP_002574107.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: pth:PTH_2562 phosphohydrolases YP_002574108.1 KEGG: tte:TTE2030 hypothetical protein YP_002574109.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: csc:Csac_0242 periplasmic binding protein/LacI transcriptional regulator YP_002574110.1 PFAM: inner-membrane translocator; KEGG: csc:Csac_0241 monosaccharide-transporting ATPase YP_002574111.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0240 ABC transporter related YP_002574112.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: csc:Csac_0239 DeoR family transcriptional regulator YP_002574113.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0238 ABC transporter related YP_002574114.1 KEGG: csc:Csac_0237 hypothetical protein YP_002574115.1 KEGG: csc:Csac_0236 hypothetical protein YP_002574116.1 KEGG: csc:Csac_0235 hypothetical protein YP_002574117.1 KEGG: csc:Csac_0234 hypothetical protein YP_002574118.1 KEGG: csc:Csac_0232 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_002574119.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: tte:TTE2029 hypothetical protein YP_002574120.1 KEGG: csc:Csac_0230 hypothetical protein YP_002574121.1 KEGG: csc:Csac_0229 DNA polymerase beta subunit YP_002574122.1 KEGG: csc:Csac_0228 cation transporter-like protein YP_002574123.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: csc:Csac_0227 heavy metal transport/detoxification protein YP_002574124.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0225 heavy metal translocating P-type ATPase YP_002574125.1 PFAM: protein of unknown function DUF134; KEGG: csc:Csac_0224 hypothetical protein YP_002574126.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: csc:Csac_0223 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_002574127.1 KEGG: csc:Csac_0222 hypothetical protein YP_002574128.1 KEGG: csc:Csac_0221 hypothetical protein YP_002574129.1 KEGG: csc:Csac_0220 ATPase involved in chromosome partitioning-like protein YP_002574130.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: csc:Csac_0245 signal-transduction protein YP_002574131.1 PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: csc:Csac_0244 tRNA (1-methyladenosine) methyltransferase-like protein YP_002574132.1 KEGG: csc:Csac_2488 hypothetical protein YP_002574133.1 PFAM: protein of unknown function DUF820; KEGG: tpd:Teth39_2031 hypothetical protein YP_002574134.1 KEGG: csc:Csac_0249 hypothetical protein YP_002574135.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002574136.1 PFAM: Integrase catalytic region; KEGG: pmo:Pmob_1257 IstB ATP binding domain-containing protein YP_002574137.1 KEGG: csc:Csac_0008 hypothetical protein YP_002574138.1 PFAM: S-layer domain protein; KEGG: csc:Csac_2445 S-layer domain-containing protein YP_002574139.1 PFAM: protein of unknown function DUF214; KEGG: csc:Csac_2446 hypothetical protein YP_002574140.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2447 ABC transporter related YP_002574141.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: csc:Csac_2448 RND family efflux transporter MFP subunit YP_002574142.1 KEGG: csc:Csac_2449 hypothetical protein YP_002574145.1 KEGG: csc:Csac_2450 hypothetical protein YP_002574146.1 PFAM: S-layer domain protein; KEGG: csc:Csac_2451 S-layer domain-containing protein YP_002574147.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: csc:Csac_2452 methyl-accepting chemotaxis sensory transducer YP_002574148.1 PFAM: pyruvate carboxyltransferase; KEGG: csc:Csac_2485 hypothetical protein YP_002574149.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: csc:Csac_2487 methyl-accepting chemotaxis sensory transducer YP_002574150.1 KEGG: csc:Csac_2486 hypothetical protein YP_002574151.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2491 binding-protein-dependent transport systems inner membrane component YP_002574152.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2492 binding-protein-dependent transport systems inner membrane component YP_002574153.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2493 extracellular solute-binding protein YP_002574154.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: csc:Csac_2494 alanine racemase YP_002574155.1 KEGG: bxe:Bxe_A1798 hypothetical protein YP_002574156.1 KEGG: hypothetical protein YP_002574158.1 KEGG: hip:CGSHiEE_05400 hypothetical protein YP_002574159.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: csc:Csac_0617 DNA-directed DNA polymerase YP_002574160.1 KEGG: csc:Csac_0616 hypothetical protein YP_002574161.1 KEGG: csc:Csac_0627 hypothetical protein YP_002574162.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: csc:Csac_0626 helix-turn-helix domain-containing protein YP_002574163.1 KEGG: amt:Amet_3134 hypothetical protein YP_002574164.1 KEGG: csc:Csac_0189 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002574165.1 PFAM: transposase IS200-family protein; KEGG: tle:Tlet_1407 transposase IS200-family protein YP_002574166.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_002574167.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_002574168.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bvu:BVU_0182 carbohydrate esterase family 12 protein YP_002574169.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: csc:Csac_0786 major facilitator transporter YP_002574170.1 PFAM: Auxin Efflux Carrier; KEGG: csc:Csac_0601 auxin efflux carrier YP_002574171.1 PFAM: Transketolase domain protein; Transketolase central region; KEGG: cpo:COPRO5265_0387 putative transketolase YP_002574172.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cpy:Cphy_0385 AraC family transcriptional regulator YP_002574173.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0358 ABC-type sugar transport system periplasmic component-like protein YP_002574174.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lsp:Bsph_1250 protein LplB YP_002574175.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_0665 binding-protein-dependent transport systems inner membrane component YP_002574176.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: csc:Csac_0600 xylose isomerase domain-containing protein YP_002574177.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: csc:Csac_0599 oxidoreductase domain-containing protein YP_002574178.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: csc:Csac_0598 xylose isomerase domain-containing protein YP_002574179.1 KEGG: csc:Csac_0596 hypothetical protein YP_002574180.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: csc:Csac_0595 hypothetical protein YP_002574181.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: csc:Csac_0594 flagellar basal body rod protein YP_002574182.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: csc:Csac_0593 cell shape determining protein MreB YP_002574183.1 KEGG: csc:Csac_0592 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; Peptidoglycan-binding domain 1 protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_002574184.1 PFAM: S-layer domain protein; KEGG: csc:Csac_0591 S-layer domain-containing protein YP_002574185.1 PFAM: S-layer domain protein; KEGG: csc:Csac_0590 hypothetical protein YP_002574186.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: csc:Csac_0589 nifR3 family TIM-barrel protein YP_002574187.1 PFAM: protein of unknown function DUF86; KEGG: drm:Dred_2423 hypothetical protein YP_002574188.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0588 DNA polymerase beta subunit YP_002574189.1 PFAM: TraX family protein; KEGG: csc:Csac_0587 TraX family protein YP_002574190.1 KEGG: csc:Csac_0145 hypothetical protein YP_002574191.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0144 ABC transporter related YP_002574192.1 KEGG: csc:Csac_0143 hypothetical protein YP_002574193.1 KEGG: csc:Csac_0143 hypothetical protein YP_002574194.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0141 ABC transporter related YP_002574195.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: csc:Csac_0140 regulatory protein GntR, HTH YP_002574196.1 KEGG: sus:Acid_6872 hypothetical protein YP_002574197.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: csc:Csac_0586 glycoside hydrolase family 3 protein YP_002574198.1 KEGG: csc:Csac_0583 L-lactate permease-like protein YP_002574199.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: csc:Csac_0548 metal dependent phosphohydrolase YP_002574200.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: csc:Csac_0547 glutamate synthase alpha subunit YP_002574201.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: csc:Csac_0546 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002574202.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_0545 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002574203.1 PFAM: ferredoxin-dependent glutamate synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: csc:Csac_0578 glutamate synthase (NADPH) YP_002574204.1 PFAM: glutamine amidotransferase class-II; KEGG: csc:Csac_0577 glutamine amidotransferase, class-II YP_002574205.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: csc:Csac_0542 cupin 2 domain-containing protein YP_002574206.1 TIGRFAM: calcium-translocating P-type ATPase, PMCA-type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: csc:Csac_0369 calcium-translocating P-type ATPase, PMCA-type YP_002574207.1 PFAM: sodium/calcium exchanger membrane region; KEGG: csc:Csac_0368 sodium/calcium exchanger membrane region YP_002574208.1 KEGG: csc:Csac_0367 hypothetical protein YP_002574209.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0366 ABC transporter related YP_002574210.1 KEGG: csc:Csac_0365 hypothetical protein YP_002574211.1 KEGG: csc:Csac_0364 hypothetical protein YP_002574212.1 KEGG: csc:Csac_0363 hypothetical protein YP_002574213.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: csc:Csac_0362 glycoside hydrolase family protein YP_002574214.1 PFAM: glycoside hydrolase family 43; KEGG: aau:AAur_1241 glycoside hydrolase family protein YP_002574215.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: cpy:Cphy_0617 signal transduction histidine kinase, LytS YP_002574216.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: cpy:Cphy_0618 two component AraC family transcriptional regulator YP_002574217.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_0621 binding-protein-dependent transport systems inner membrane component YP_002574218.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_0897 binding-protein-dependent transport systems inner membrane component YP_002574219.1 PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_0619 extracellular solute-binding protein YP_002574220.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0358 ABC-type sugar transport system periplasmic component-like protein YP_002574222.1 PFAM: glycoside hydrolase family 28; KEGG: csc:Csac_0361 galacturan 1,4-alpha-galacturonidase YP_002574223.1 PFAM: glycosyl hydrolase family 88; KEGG: csc:Csac_0360 glycosy hydrolase family protein YP_002574224.1 PFAM: protein of unknown function DUF1121; KEGG: cac:CAC0356 hypothetical protein YP_002574225.1 TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: csc:Csac_2718 2-deoxy-D-gluconate 3-dehydrogenase YP_002574226.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate YP_002574227.1 PFAM: PfkB domain protein; KEGG: csc:Csac_2720 ribokinase-like domain-containing protein YP_002574228.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: csc:Csac_0354 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase YP_002574229.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: csc:Csac_0352 regulatory protein, IclR YP_002574230.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: csc:Csac_0351 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_002574231.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: csc:Csac_0350 xylose isomerase domain-containing protein YP_002574232.1 KEGG: csc:Csac_0349 ketose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_002574233.1 PFAM: carbohydrate kinase FGGY; KEGG: csc:Csac_0348 carbohydrate kinase, FGGY YP_002574234.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: csc:Csac_0347 DeoR family transcriptional regulator YP_002574235.1 KEGG: csc:Csac_0346 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_002574236.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: csc:Csac_0345 CMP/dCMP deaminase, zinc-binding YP_002574237.1 KEGG: csc:Csac_0344 hypothetical protein YP_002574238.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: csc:Csac_0343 protein of unknown function DUF610, YibQ YP_002574239.1 KEGG: csc:Csac_0342 hypothetical protein YP_002574240.1 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus YP_002574241.1 TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase; KEGG: csc:Csac_0340 purine operon repressor YP_002574242.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: csc:Csac_0339 UDP-N-acetylmuramate--alanine ligase YP_002574243.1 PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: csc:Csac_0338 peptidoglycan-binding LysM YP_002574244.1 PFAM: protein of unknown function DUF1021; KEGG: csc:Csac_0337 hypothetical protein YP_002574245.1 KEGG: fno:Fnod_1629 hypothetical protein YP_002574246.1 KEGG: csc:Csac_2596 hypothetical protein YP_002574247.1 KEGG: csc:Csac_2604 hypothetical protein YP_002574249.1 PFAM: domain of unknown function DUF1738; KEGG: tte:TTE2027 antirestriction protein YP_002574251.1 KEGG: fgenesh4_pm.C_LG_XIX000179; . ; K08876 SCY1-like YP_002574252.1 KEGG: csc:Csac_1452 hypothetical protein YP_002574257.1 TIGRFAM: phage recombination protein Bet; PFAM: RecT protein; KEGG: csc:Csac_1450 phage recombination protein Bet YP_002574258.1 KEGG: ngk:NGK_1056 Ydd YP_002574263.1 KEGG: taf:THA_1536 hypothetical protein YP_002574264.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: gur:Gura_2617 RpoD family RNA polymerase sigma factor YP_002574267.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: cyt:cce_5062 hypothetical protein YP_002574269.1 PFAM: ribonuclease H; zinc finger SWIM domain protein; KEGG: ank:AnaeK_0760 ribonuclease H YP_002574271.1 PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: csc:Csac_1237 transposase, IS605 OrfB YP_002574273.1 PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: ckl:CKL_3295 DNA helicase YP_002574274.1 KEGG: kpe:KPK_3396 hypothetical protein YP_002574275.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: drm:Dred_0888 XRE family transcriptional regulator YP_002574276.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: csc:Csac_1414 XRE family transcriptional regulator YP_002574277.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gka:GK0494 transcriptional repressor of PBSX genes YP_002574278.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: ava:Ava_4407 D12 class N6 adenine-specific DNA methyltransferase YP_002574279.1 KEGG: bha:BH3509 restriction endonuclease (HaeIII) YP_002574280.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cpo:COPRO5265_0041 tyrosine recombinase XerD YP_002574281.1 PFAM: LexA DNA-binding domain protein; KEGG: bwe:BcerKBAB4_3377 LexA repressor YP_002574282.1 PFAM: Peptidase M23; Lytic transglycosylase catalytic; KEGG: csc:Csac_2622 peptidase M23B YP_002574284.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: taf:THA_1264 HNH endonuclease domain protein YP_002574285.1 KEGG: hmo:HM1_0600 hypothetical protein YP_002574286.1 PFAM: endodeoxyribonuclease RusA; KEGG: drm:Dred_0504 endodeoxyribonuclease RusA YP_002574287.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: ssp:SSP0715 hypothetical protein YP_002574288.1 KEGG: csc:Csac_2623 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_002574289.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: csc:Csac_1433 single-strand binding protein YP_002574290.1 KEGG: csc:Csac_1432 hypothetical protein YP_002574291.1 KEGG: csc:Csac_1431 hypothetical protein YP_002574292.1 PFAM: type II secretion system protein; KEGG: csc:Csac_1430 type II secretion system protein YP_002574293.1 PFAM: type II secretion system protein; KEGG: csc:Csac_1429 type II secretion system protein YP_002574294.1 PFAM: type II secretion system protein E; KEGG: csc:Csac_1428 type II secretion system protein E YP_002574295.1 KEGG: csc:Csac_1427 ATPase involved in chromosome partitioning-like protein YP_002574296.1 KEGG: csc:Csac_1426 hypothetical protein YP_002574297.1 KEGG: csc:Csac_1425 hypothetical protein YP_002574298.1 PFAM: peptidase A24A prepilin type IV; KEGG: csc:Csac_1423 peptidase A24A, prepilin type IV YP_002574299.1 KEGG: csc:Csac_1422 ATPase involved in chromosome partitioning-like protein YP_002574300.1 KEGG: csc:Csac_1421 hypothetical protein YP_002574301.1 KEGG: csc:Csac_1420 hypothetical protein YP_002574302.1 KEGG: csc:Csac_1419 hypothetical protein YP_002574304.1 KEGG: csc:Csac_1418 hypothetical protein YP_002574305.1 KEGG: csc:Csac_1417 hypothetical protein YP_002574306.1 KEGG: csc:Csac_1410 hypothetical protein YP_002574307.1 PFAM: protein of unknown function DUF955; KEGG: csc:Csac_1409 hypothetical protein YP_002574308.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: csc:Csac_1408 XRE family transcriptional regulator YP_002574309.1 KEGG: hso:HS_0558 hypothetical protein YP_002574310.1 KEGG: hso:HS_0557 phage P1-related protein YP_002574311.1 KEGG: csc:Csac_1405 hypothetical protein YP_002574312.1 KEGG: lin:lin2562 hypothetical protein YP_002574313.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: taf:THA_1264 HNH endonuclease domain protein YP_002574315.1 KEGG: csc:Csac_0008 hypothetical protein YP_002574316.1 PFAM: phage antirepressor protein; BRO domain protein; KEGG: spi:MGAS10750_Spy1682 phage antirepressor protein YP_002574319.1 PFAM: N-6 DNA methylase; putative RNA methylase; KEGG: rbe:RBE_0858 type I restriction-modification system methyltransferase subunit YP_002574320.1 KEGG: cdf:CD1500 transposase-like protein B; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002574321.1 PFAM: transposase IS200-family protein; KEGG: cpr:CPR_0546 ISCpe2, transposase orfA YP_002574322.1 KEGG: csc:Csac_2495 hypothetical protein YP_002574323.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: csc:Csac_2496 hypothetical protein YP_002574324.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: csc:Csac_1414 XRE family transcriptional regulator YP_002574325.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ckl:CKL_2012 hypothetical protein YP_002574326.1 KEGG: csc:Csac_1413 hypothetical protein YP_002574327.1 SMART: AAA ATPase; KEGG: amt:Amet_2119 hypothetical protein YP_002574334.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_2613 radical SAM domain-containing protein YP_002574342.1 KEGG: csc:Csac_0189 IS605 family transposase OrfB YP_002574343.1 PFAM: helix-turn-helix domain protein; KEGG: csc:Csac_2454 helix-turn-helix domain-containing protein YP_002574344.1 KEGG: csc:Csac_2455 hypothetical protein YP_002574347.1 TIGRFAM: transposase ; transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: trq:TRQ2_0133 transposase YP_002574352.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: csc:Csac_1393 histone family protein DNA-binding protein YP_002574355.1 KEGG: tth:TTC1428 hypothetical protein YP_002574358.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: csc:Csac_1401 RNA-binding S1 domain-containing protein YP_002574359.1 PFAM: Radical SAM domain protein; KEGG: mja:MJ1227 pyruvate formate-lyase activating enzyme (act) YP_002574360.1 PFAM: TRAG family protein; KEGG: csc:Csac_1400 TraG family protein YP_002574361.1 KEGG: csc:Csac_2654 hypothetical protein YP_002574362.1 KEGG: csc:Csac_1396 hypothetical protein YP_002574363.1 KEGG: csc:Csac_1395 hypothetical protein YP_002574364.1 KEGG: csc:Csac_1394 hypothetical protein YP_002574365.1 KEGG: csc:Csac_2662 hypothetical protein YP_002574366.1 KEGG: csc:Csac_1387 hypothetical protein YP_002574367.1 KEGG: csc:Csac_2663 hypothetical protein YP_002574368.1 KEGG: ypi:YpsIP31758_0750 RadC family DNA repair protein YP_002574369.1 KEGG: csc:Csac_1385 AAA ATPase YP_002574370.1 KEGG: csc:Csac_2665 hypothetical protein YP_002574373.1 KEGG: tte:TTE2101 hypothetical protein YP_002574374.1 KEGG: carbonic anhydrase family protein YP_002574375.1 KEGG: csc:Csac_2669 hypothetical protein YP_002574376.1 KEGG: tpd:Teth39_2241 hypothetical protein YP_002574377.1 KEGG: Dynein heavy chain family protein; K10408 dynein heavy chain, axonemal YP_002574379.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: aau:AAur_3964 helix-turn-helix domain-containing protein YP_002574380.1 KEGG: tte:TTE2126 hypothetical protein YP_002574381.1 PFAM: integrase family protein; KEGG: cth:Cthe_2455 phage integrase YP_002574382.1 KEGG: csc:Csac_0307 biotin synthase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002574383.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: csc:Csac_0306 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002574384.1 TIGRFAM: dethiobiotin synthase; KEGG: csc:Csac_0305 dethiobiotin synthase YP_002574385.1 PFAM: BioY protein; KEGG: csc:Csac_0304 BioY protein YP_002574387.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: csc:Csac_0303 AbrB family transcriptional regulator YP_002574388.1 KEGG: pth:PTH_0397 cytotoxic translational repressor YP_002574390.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_002574391.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: csc:Csac_0301 response regulator receiver protein YP_002574392.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: csc:Csac_0300 histidine kinase internal region YP_002574393.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0299 binding-protein-dependent transport systems inner membrane component YP_002574394.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0298 binding-protein-dependent transport systems inner membrane component YP_002574395.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0297 ABC-type sugar transport system periplasmic component-like protein YP_002574396.1 PFAM: glycosidase PH1107-related; KEGG: csc:Csac_0296 glycosidase, PH1107-related YP_002574397.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bcl:ABC0314 transcriptional regulator YP_002574398.1 KEGG: csc:Csac_0294 N-acylglucosamine 2-epimerase YP_002574399.1 KEGG: csc:Csac_0293 hypothetical protein YP_002574400.1 KEGG: csc:Csac_0292 hypothetical protein YP_002574401.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: csc:Csac_0291 ATPase YP_002574402.1 PFAM: regulator of chromosome condensation RCC1; KEGG: csc:Csac_0290 regulator of chromosome condensation, RCC1 YP_002574403.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: csc:Csac_0285 hemerythrin-like metal-binding protein YP_002574404.1 PFAM: regulator of chromosome condensation RCC1; KEGG: csc:Csac_0284 regulator of chromosome condensation, RCC1 YP_002574405.1 PFAM: MORN variant repeat protein; KEGG: csc:Csac_0283 hypothetical protein YP_002574406.1 SMART: Hedgehog/intein hint domain protein; KEGG: csc:Csac_0286 hypothetical protein YP_002574407.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: csc:Csac_0285 hemerythrin-like metal-binding protein YP_002574408.1 PFAM: regulator of chromosome condensation RCC1; KEGG: csc:Csac_0284 regulator of chromosome condensation, RCC1 YP_002574409.1 PFAM: MORN variant repeat protein; KEGG: csc:Csac_0283 hypothetical protein YP_002574410.1 PFAM: transglutaminase domain protein; SMART: Hedgehog/intein hint domain protein; KEGG: csc:Csac_0279 hypothetical protein YP_002574411.1 KEGG: csc:Csac_0278 hypothetical protein YP_002574412.1 PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0431 extracellular solute-binding protein YP_002574413.1 KEGG: csc:Csac_0430 alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_002574414.1 TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; KEGG: csc:Csac_0429 alpha-glucan phosphorylase YP_002574415.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0428 binding-protein-dependent transport systems inner membrane component YP_002574416.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0427 binding-protein-dependent transport systems inner membrane component YP_002574417.1 PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: csc:Csac_0426 alpha amylase, catalytic region YP_002574418.1 PFAM: class II aldolase/adducin family protein; KEGG: csc:Csac_0425 class II aldolase/adducin family protein YP_002574419.1 KEGG: csc:Csac_0424 hypothetical protein YP_002574420.1 PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: csc:Csac_0423 cobalamin B12-binding domain-containing protein YP_002574421.1 PFAM: nucleoside recognition domain protein; KEGG: csc:Csac_0422 nucleoside recognition domain-containing protein YP_002574422.1 PFAM: nucleoside recognition domain protein; KEGG: csc:Csac_0421 nucleoside recognition domain-containing protein YP_002574423.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: csc:Csac_0420 oxidoreductase domain-containing protein YP_002574424.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: tpd:Teth39_1033 RND family efflux transporter MFP subunit YP_002574425.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE1199 ABC-type transport systems, involved in lipoprotein release, ATPase components YP_002574426.1 PFAM: protein of unknown function DUF214; KEGG: tpd:Teth39_1031 hypothetical protein YP_002574427.1 PFAM: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: csc:Csac_0419 integral membrane sensor signal transduction histidine kinase YP_002574428.1 KEGG: csc:Csac_0419 integral membrane sensor signal transduction histidine kinase YP_002574429.1 KEGG: csc:Csac_0410 spermine synthase YP_002574430.1 KEGG: csc:Csac_0409 hypothetical protein YP_002574431.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: csc:Csac_0408 alpha amylase, catalytic region YP_002574432.1 KEGG: csc:Csac_0383 hypothetical protein YP_002574433.1 KEGG: csc:Csac_0382 DNA repair photolyase-like protein YP_002574434.1 KEGG: csc:Csac_0189 IS605 family transposase OrfB YP_002574435.1 PFAM: protein of unknown function UPF0150; KEGG: csc:Csac_2103 hypothetical protein YP_002574436.1 PFAM: protein of unknown function DUF820; KEGG: csc:Csac_2746 hypothetical protein YP_002574437.1 PFAM: PP-loop domain protein; KEGG: csc:Csac_0539 PP-loop domain-containing protein YP_002574438.1 KEGG: csc:Csac_0538 hypothetical protein YP_002574439.1 TIGRFAM: stage IV sporulation protein A; KEGG: csc:Csac_0537 hypothetical protein YP_002574440.1 PFAM: iron permease FTR1; KEGG: csc:Csac_0536 iron permease FTR1 YP_002574441.1 TIGRFAM: regulatory protein, FmdB family; KEGG: csc:Csac_0535 FmdB family regulatory protein YP_002574442.1 KEGG: bvi:Bcep1808_7510 hypothetical protein YP_002574443.1 KEGG: csc:Csac_0534 hypothetical protein YP_002574444.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: csc:Csac_0533 thioredoxin-disulfide reductase YP_002574445.1 PFAM: protein of unknown function DUF970; KEGG: csc:Csac_0532 hypothetical protein YP_002574446.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0531 ABC transporter related YP_002574447.1 PFAM: SufBD protein; KEGG: csc:Csac_0530 SufBD protein YP_002574448.1 PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0529 hypothetical protein YP_002574449.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: csc:Csac_0528 RND family efflux transporter MFP subunit YP_002574450.1 KEGG: csc:Csac_0527 hypothetical protein YP_002574452.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0526 ABC transporter related YP_002574453.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: csc:Csac_0525 hypothetical protein YP_002574454.1 KEGG: csc:Csac_0524 hypothetical protein YP_002574455.1 PFAM: bacteriocin AS-48; KEGG: csc:Csac_0523 hypothetical protein YP_002574456.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_0522 ABC transporter related YP_002574457.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: csc:Csac_0521 ABC transporter related YP_002574458.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: csc:Csac_0520 MarR family transcriptional regulator YP_002574459.1 PFAM: protein of unknown function DUF554; KEGG: csc:Csac_0519 hypothetical protein YP_002574460.1 KEGG: mvn:Mevan_0100 hypothetical protein YP_002574461.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0515 ABC transporter related YP_002574462.1 PFAM: ABC-2 type transporter; KEGG: csc:Csac_0514 ABC-2 type transporter YP_002574463.1 PFAM: ABC-2 type transporter; KEGG: csc:Csac_0513 ABC-2 type transporter YP_002574464.1 PFAM: ATP-binding region ATPase domain protein; KEGG: csc:Csac_0511 putative signal transduction histidine kinase YP_002574465.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: csc:Csac_0510 two component LuxR family transcriptional regulator YP_002574468.1 KEGG: csc:Csac_0008 hypothetical protein YP_002574469.1 KEGG: csc:Csac_2638 PKD domain-containing protein YP_002574470.1 KEGG: csc:Csac_0009 hypothetical protein YP_002574471.1 KEGG: csc:Csac_1411 hypothetical protein YP_002574474.1 KEGG: csc:Csac_0483 peptidase M48, Ste24p YP_002574476.1 KEGG: csc:Csac_0504 hypothetical protein YP_002574477.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: csc:Csac_0500 regulatory protein, ArsR YP_002574478.1 PFAM: permease; KEGG: csc:Csac_0499 permease YP_002574479.1 TIGRFAM: redox-active disulfide protein 2; KEGG: csc:Csac_0498 redox-active disulfide protein 2 YP_002574480.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csc:Csac_0497 helix-turn-helix domain-containing protein YP_002574481.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_002574482.1 KEGG: csc:Csac_0494 hypothetical protein YP_002574483.1 PFAM: major facilitator superfamily MFS_1; KEGG: csc:Csac_0493 major facilitator transporter YP_002574484.1 KEGG: csc:Csac_0492 hypothetical protein YP_002574485.1 catalyzes the formation of biotin from dethiobiotin and sulfur YP_002574486.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: csc:Csac_0490 1A family penicillin-binding protein YP_002574487.1 PFAM: ATPase; DUF234 DEXX-box ATPase; KEGG: csc:Csac_0072 ATPase YP_002574488.1 PFAM: Domain of unknown function DUF1848; KEGG: csc:Csac_0047 hypothetical protein YP_002574489.1 KEGG: csc:Csac_0046 hypothetical protein YP_002574492.1 KEGG: csc:Csac_0068 hypothetical protein YP_002574493.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: csc:Csac_0066 CRISPR-associated Cas2 family protein YP_002574494.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: csc:Csac_0065 CRISPR-associated Cas1 family protein YP_002574495.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: csc:Csac_0064 CRISPR-associated Cas4 family protein YP_002574496.1 KEGG: csc:Csac_0063 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicases YP_002574497.1 TIGRFAM: CRISPR-associated protein Cas5, Hmari subtype; CRISPR-associated protein Cas5; KEGG: csc:Csac_0058 CRISPR-associated Cas5 family protein YP_002574498.1 TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801; KEGG: csc:Csac_0057 CRISPR-associated Csh2 family protein YP_002574499.1 TIGRFAM: CRISPR-associated protein, Csh1 family; CRISPR-associated protein, TM1802 family; KEGG: csc:Csac_0056 CRISPR-associated Csh1 family protein YP_002574501.1 PFAM: putative transposase IS891/IS1136/IS1341 family; KEGG: csc:Csac_0189 IS605 family transposase OrfB YP_002574502.1 PFAM: transposase IS200-family protein; KEGG: tle:Tlet_1407 transposase IS200-family protein YP_002574503.1 KEGG: csc:Csac_2638 PKD domain-containing protein YP_002574504.1 KEGG: csc:Csac_2639 hypothetical protein YP_002574505.1 KEGG: csc:Csac_1410 hypothetical protein YP_002574506.1 PFAM: protein of unknown function DUF955; KEGG: csc:Csac_2641 hypothetical protein YP_002574507.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: tte:TTE2046 transcriptional regulator YP_002574508.1 KEGG: csc:Csac_0008 hypothetical protein YP_002574509.1 KEGG: csc:Csac_0308 hypothetical protein YP_002574510.1 KEGG: csc:Csac_0569 hypothetical protein YP_002574511.1 KEGG: csc:Csac_1405 hypothetical protein YP_002574512.1 KEGG: hya:HY04AAS1_1138 hypothetical protein YP_002574513.1 KEGG: csc:Csac_0044 hypothetical protein YP_002574514.1 PFAM: ATPase; DUF234 DEXX-box ATPase; KEGG: csc:Csac_0049 ATPase YP_002574516.1 PFAM: beta-lactamase domain protein; KEGG: mja:MJ0162 putative mRNA 3'-end processing factor 3 YP_002574517.1 KEGG: cbb:CLD_0710 hypothetical protein YP_002574518.1 PFAM: Heat shock protein 70; KEGG: tex:Teth514_1029 2-alkenal reductase YP_002574519.1 KEGG: hypothetical protein YP_002574520.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mhu:Mhun_1505 protein serine/threonine phosphatases YP_002574521.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: nis:NIS_0193 hypothetical protein YP_002574522.1 KEGG: pau:PA14_28910 putative radical activating enzyme YP_002574523.1 PFAM: ATPase AAA-2 domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pap:PSPA7_2530 putative chaperone YP_002574524.1 KEGG: viral A-type inclusion protein YP_002574525.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; protein of unknown function RIO1; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mhu:Mhun_1503 TPR repeat-containing serine/threonin protein kinase YP_002574526.1 KEGG: csc:Csac_0086 hypothetical protein YP_002574527.1 KEGG: csc:Csac_0080 hypothetical protein YP_002574528.1 TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; PFAM: protein of unknown function DUF324; KEGG: csc:Csac_0079 CRISPR-associated RAMP Csm5 family protein YP_002574529.1 TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; PFAM: protein of unknown function DUF324; KEGG: csc:Csac_0078 CRISPR-associated RAMP Csm4 family protein YP_002574530.1 TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: csc:Csac_0077 CRISPR-associated RAMP Csm3 family protein YP_002574531.1 TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: protein of unknown function DUF310; KEGG: csc:Csac_0076 CRISPR-associated Csm2 family protein YP_002574532.1 TIGRFAM: CRISPR-associated protein, Csm1 family; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: csc:Csac_0075 CRISPR-associated Csm1 family protein YP_002574533.1 PFAM: transposase IS200-family protein; KEGG: tle:Tlet_1407 transposase IS200-family protein YP_002574534.1 KEGG: csc:Csac_0074 hypothetical protein YP_002574535.1 KEGG: csc:Csac_0073 hypothetical protein YP_002574537.1 KEGG: csc:Csac_0025 hypothetical protein YP_002574539.1 PFAM: protein of unknown function DUF114; peptidase S14 ClpP; KEGG: afw:Anae109_3319 hypothetical protein YP_002574540.1 PFAM: Rhomboid family protein; KEGG: chy:CHY_0820 rhomboid family protein YP_002574541.1 TIGRFAM: CRISPR-associated protein, MJ1666 family; KEGG: csc:Csac_0043 CRISPR-associated DxTHG family protein YP_002574542.1 KEGG: csc:Csac_0042 hypothetical protein YP_002574544.1 KEGG: hya:HY04AAS1_1138 hypothetical protein YP_002574548.1 PFAM: protein of unknown function DUF303 acetylesterase putative; glycoside hydrolase family 2 sugar binding; KEGG: csc:Csac_0206 protein of unknown function DUF303, acetylesterase putative YP_002574549.1 PFAM: polysaccharide deacetylase; KEGG: csc:Csac_0205 polysaccharide deacetylase YP_002574550.1 PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10; KEGG: csc:Csac_0204 glycoside hydrolase family protein YP_002574551.1 PFAM: BioY protein; KEGG: csc:Csac_0198 BioY protein YP_002574552.1 KEGG: csc:Csac_0197 RecD/TraA family helicase; TIGRFAM: helicase, RecD/TraA family; SMART: AAA ATPase YP_002574553.1 KEGG: csc:Csac_0095 hypothetical protein YP_002574554.1 KEGG: cdf:CD0619 hypothetical protein YP_002574555.1 KEGG: csc:Csac_0094 hypothetical protein YP_002574556.1 PFAM: protein of unknown function DUF1659; KEGG: csc:Csac_0093 hypothetical protein YP_002574557.1 TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: csc:Csac_0092 SpoVA protein YP_002574558.1 TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; KEGG: csc:Csac_0091 stage V sporulation protein AD YP_002574559.1 TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: csc:Csac_0090 SpoVA protein YP_002574560.1 KEGG: csc:Csac_0025 hypothetical protein YP_002574561.1 KEGG: csc:Csac_0024 hypothetical protein YP_002574562.1 KEGG: csc:Csac_0023 hypothetical protein YP_002574563.1 PFAM: Stage V sporulation protein S; KEGG: csc:Csac_0022 stage V sporulation protein S YP_002574564.1 KEGG: csc:Csac_0021 hypothetical protein YP_002574565.1 KEGG: csc:Csac_0020 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; extracellular solute-binding protein family 3; PAS domain containing protein YP_002574566.1 KEGG: csc:Csac_0013 hypothetical protein YP_002574567.1 KEGG: csc:Csac_0012 hypothetical protein YP_002574569.1 PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: csc:Csac_2756 methyl-accepting chemotaxis sensory transducer YP_002574570.1 KEGG: csc:Csac_2757 allergen V5/TPX-1 family protein YP_002574571.1 KEGG: csc:Csac_2759 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_002574572.1 KEGG: csc:Csac_2760 hypothetical protein YP_002574573.1 KEGG: csc:Csac_2761 hypothetical protein YP_002574574.1 KEGG: csc:Csac_2762 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein YP_002574575.1 KEGG: csc:Csac_2763 hypothetical protein YP_002574576.1 KEGG: csc:Csac_2764 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_002574577.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: csc:Csac_2765 cobyrinic acid a,c-diamide synthase YP_002574578.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2766 phosphate binding protein YP_002574579.1 KEGG: csc:Csac_2767 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase YP_002574580.1 KEGG: csc:Csac_2768 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_002574581.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: csc:Csac_2769 methyltransferase GidB YP_002574582.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002574583.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: csc:Csac_2771 tRNA modification GTPase TrmE YP_002574584.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: csc:Csac_2772 single-stranded nucleic acid binding R3H domain-containing protein YP_002574585.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: csc:Csac_2773 60 kDa inner membrane insertion protein YP_002574586.1 PFAM: protein of unknown function DUF37; KEGG: csc:Csac_2774 hypothetical protein YP_002574587.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: csc:Csac_2775 ribonuclease P protein component YP_002574588.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_002574589.1 PFAM: protein of unknown function UPF0236; KEGG: tte:TTE2212 hypothetical protein YP_002574590.1 PFAM: GerA spore germination protein; KEGG: csc:Csac_2777 GerA spore germination protein YP_002574591.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: csc:Csac_2778 spore germination protein YP_002574592.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: csc:Csac_2779 spore germination B3 GerAC family protein YP_002574603.1 KEGG: ckl:CKL_2946 transcriptional regulator YP_002574604.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: hbu:Hbut_0660 hypothetical protein YP_002574605.1 PFAM: regulatory protein MerR; KEGG: ser:SEA0001 replication-associated protein YP_002574606.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: csc:Csac_0575 FliA/WhiG family RNA polymerase sigma factor YP_002574607.1 KEGG: csc:Csac_0574 hypothetical protein YP_002574609.1 KEGG: chy:CHY_0837 DNA repair protein RadA YP_002574610.1 KEGG: cpy:Cphy_3144 hypothetical protein YP_002574611.1 KEGG: csc:Csac_2655 hypothetical protein