-- dump date 20120504_140452 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 360104000001 SEQ_END SEQ_END NC_009795.1 30949 30949 DR NC_009795.1; contig end 30949..30949 Campylobacter concisus 13826 360104000002 SEQ_END SEQ_END NC_009796.1 16457 16457 DR NC_009796.1; contig end 16457..16457 Campylobacter concisus 13826 360104000003 SEQ_END SEQ_END NC_009802.1 2052007 2052007 DR NC_009802.1; contig end 2052007..2052007 Campylobacter concisus 13826 YP_001456647.1 CDS CCC13826_0611 NC_009795.1 1 1293 D Cpp22 1..1293 Campylobacter concisus 13826 5595536 YP_001456648.1 CDS parA NC_009795.1 1591 2277 D identified by similarity to GB:AAO18206.1; match to protein family HMM PF01656; hypothetical protein 1591..2277 Campylobacter concisus 13826 5595527 YP_001456649.1 CDS CCC13826_0609 NC_009795.1 2280 2501 D identified by glimmer; putative; hypothetical protein 2280..2501 Campylobacter concisus 13826 5595534 YP_001456650.1 CDS CCC13826_1681 NC_009795.1 2869 4641 D identified by match to protein family HMM PF03865; putative periplasmic protein 2869..4641 Campylobacter concisus 13826 5595538 YP_001456651.1 CDS CCC13826_1682 NC_009795.1 4651 9810 D identified by match to protein family HMM PF05594; match to protein family HMM PF05860; match to protein family HMM TIGR01731; match to protein family HMM TIGR01901; filamentous haemagglutinin family protein 4651..9810 Campylobacter concisus 13826 5595522 YP_001456652.1 CDS CCC13826_1744 NC_009795.1 9807 10121 D identified by glimmer; putative; hypothetical protein 9807..10121 Campylobacter concisus 13826 5595540 YP_001456653.1 CDS CCC13826_0632 NC_009795.1 10511 11440 D identified by glimmer; putative; hypothetical protein 10511..11440 Campylobacter concisus 13826 5595532 YP_001456654.1 CDS CCC13826_0631 NC_009795.1 11437 12048 D identified by glimmer; putative; hypothetical protein 11437..12048 Campylobacter concisus 13826 5595550 YP_001456655.1 CDS CCC13826_0630 NC_009795.1 12151 12291 D hypothetical protein 12151..12291 Campylobacter concisus 13826 5595521 YP_001456656.1 CDS CCC13826_0629 NC_009795.1 12291 12734 D hypothetical protein 12291..12734 Campylobacter concisus 13826 5595541 YP_001456657.1 CDS CCC13826_1713 NC_009795.1 12790 13164 D putative phytanoyl-CoA dioxygenase 12790..13164 Campylobacter concisus 13826 5595529 YP_001456658.1 CDS CCC13826_0628 NC_009795.1 13584 13859 D hypothetical protein 13584..13859 Campylobacter concisus 13826 5595530 YP_001456659.1 CDS CCC13826_0627 NC_009795.1 13912 14250 D hypothetical protein 13912..14250 Campylobacter concisus 13826 5595528 YP_001456660.1 CDS CCC13826_0626 NC_009795.1 14330 15547 D identified by glimmer; putative; hypothetical protein 14330..15547 Campylobacter concisus 13826 5595539 YP_001456661.1 CDS CCC13826_0625 NC_009795.1 15547 18306 D identified by glimmer; putative; hypothetical protein 15547..18306 Campylobacter concisus 13826 5595531 YP_001456662.1 CDS CCC13826_0624 NC_009795.1 18429 18650 R identified by glimmer; putative; hypothetical protein complement(18429..18650) Campylobacter concisus 13826 5595553 YP_001456663.1 CDS CCC13826_0623 NC_009795.1 18662 19477 R identified by glimmer; putative; hypothetical protein complement(18662..19477) Campylobacter concisus 13826 5595542 YP_001456664.1 CDS CCC13826_0622 NC_009795.1 19721 20677 R identified by match to protein family HMM PF07751; hypothetical protein complement(19721..20677) Campylobacter concisus 13826 5595545 YP_001456665.1 CDS CCC13826_0621 NC_009795.1 20674 20841 R identified by glimmer; putative; hypothetical protein complement(20674..20841) Campylobacter concisus 13826 5595548 YP_001456666.1 CDS CCC13826_0620 NC_009795.1 21012 22184 R identified by match to protein family HMM PF07804; match to protein family HMM PF07805; HipA domain-containing protein complement(21012..22184) Campylobacter concisus 13826 5595543 YP_001456667.1 CDS CCC13826_1708 NC_009795.1 22302 22793 R identified by glimmer; putative; hypothetical protein complement(22302..22793) Campylobacter concisus 13826 5595551 YP_001456668.1 CDS CCC13826_1695 NC_009795.1 22940 23128 R identified by glimmer; putative; hypothetical protein complement(22940..23128) Campylobacter concisus 13826 5595544 YP_001456669.1 CDS CCC13826_1694 NC_009795.1 23905 24087 R identified by glimmer; putative; hypothetical protein complement(23905..24087) Campylobacter concisus 13826 5595549 YP_001456670.1 CDS CCC13826_0619 NC_009795.1 24162 24515 R identified by match to protein family HMM PF03681; hypothetical protein complement(24162..24515) Campylobacter concisus 13826 5595552 YP_001456671.1 CDS CCC13826_0618 NC_009795.1 24512 24739 R hypothetical protein complement(24512..24739) Campylobacter concisus 13826 5595535 YP_001456672.1 CDS CCC13826_0617 NC_009795.1 24780 25769 R identified by match to protein family HMM PF00589; phage integrase family site specific recombinase complement(24780..25769) Campylobacter concisus 13826 5595533 YP_001456673.1 CDS CCC13826_0616 NC_009795.1 26057 26170 D identified by glimmer; putative; hypothetical protein 26057..26170 Campylobacter concisus 13826 5595547 YP_001456674.1 CDS CCC13826_0615 NC_009795.1 26360 26617 D identified by glimmer; putative; hypothetical protein 26360..26617 Campylobacter concisus 13826 5595537 YP_001456675.1 CDS CCC13826_0614 NC_009795.1 26785 27987 D hypothetical protein 26785..27987 Campylobacter concisus 13826 5595546 YP_001456676.1 CDS CCC13826_1693 NC_009795.1 28055 28219 D identified by glimmer; putative; hypothetical protein 28055..28219 Campylobacter concisus 13826 5595525 YP_001456677.1 CDS CCC13826_1686 NC_009795.1 28448 28564 R identified by glimmer; putative; hypothetical protein complement(28448..28564) Campylobacter concisus 13826 5595526 YP_001456678.1 CDS CCC13826_0613 NC_009795.1 28997 29851 D identified by glimmer; putative; hypothetical protein 28997..29851 Campylobacter concisus 13826 5595524 YP_001456679.1 CDS CCC13826_0612 NC_009795.1 29851 30249 D hypothetical protein 29851..30249 Campylobacter concisus 13826 5595523 YP_001456680.1 CDS CCC13826_1364 NC_009796.1 349 1308 D identified by match to protein family HMM PF01051; putative pNL871104_p1 349..1308 Campylobacter concisus 13826 5595569 YP_001456681.1 CDS CCC13826_1363 NC_009796.1 1408 1827 D identified by glimmer; putative; hypothetical protein 1408..1827 Campylobacter concisus 13826 5595557 YP_001456682.1 CDS CCC13826_1362 NC_009796.1 1881 3023 D hypothetical protein 1881..3023 Campylobacter concisus 13826 5595570 YP_001456683.1 CDS CCC13826_1361 NC_009796.1 3134 3697 D Cpp12 3134..3697 Campylobacter concisus 13826 5595565 YP_001456684.1 CDS CCC13826_1360 NC_009796.1 3697 3984 D identified by glimmer; putative; hypothetical protein 3697..3984 Campylobacter concisus 13826 5595575 YP_001456685.1 CDS CCC13826_1359 NC_009796.1 4010 4567 D identified by glimmer; putative; hypothetical protein 4010..4567 Campylobacter concisus 13826 5595554 YP_001456686.1 CDS CCC13826_1358 NC_009796.1 4621 5820 D hypothetical protein 4621..5820 Campylobacter concisus 13826 5595555 YP_001456687.1 CDS CCC13826_1376 NC_009796.1 6048 6278 D hypothetical protein 6048..6278 Campylobacter concisus 13826 5595573 YP_001456688.1 CDS CCC13826_1357 NC_009796.1 6281 6727 D identified by glimmer; putative; hypothetical protein 6281..6727 Campylobacter concisus 13826 5595563 YP_001456689.1 CDS CCC13826_1356 NC_009796.1 6752 6982 R hypothetical protein complement(6752..6982) Campylobacter concisus 13826 5595561 YP_001456690.1 CDS CCC13826_1355 NC_009796.1 7024 8130 R hypothetical protein complement(7024..8130) Campylobacter concisus 13826 5595562 YP_001456691.1 CDS CCC13826_1379 NC_009796.1 8190 8627 R identified by match to protein family HMM TIGR01847; bacteriocin-type signal sequence domain-containing protein complement(8190..8627) Campylobacter concisus 13826 5595556 YP_001456692.1 CDS CCC13826_1354 NC_009796.1 8757 9044 R identified by glimmer; putative; hypothetical protein complement(8757..9044) Campylobacter concisus 13826 5595558 YP_001456693.1 CDS CCC13826_1373 NC_009796.1 9186 9686 D hypothetical protein 9186..9686 Campylobacter concisus 13826 5595559 YP_001456694.1 CDS CCC13826_1372 NC_009796.1 9742 10530 D hypothetical protein 9742..10530 Campylobacter concisus 13826 5595560 YP_001456695.1 CDS CCC13826_1371 NC_009796.1 10540 11133 R identified by match to protein family HMM PF03412; peptidase family protein complement(10540..11133) Campylobacter concisus 13826 5595568 YP_001456696.1 CDS CCC13826_1370 NC_009796.1 11118 11972 R HmcD domain-containing protein complement(11118..11972) Campylobacter concisus 13826 5595574 YP_001456697.1 CDS CCC13826_1369 NC_009796.1 12027 12800 R identified by glimmer; putative; hypothetical protein complement(12027..12800) Campylobacter concisus 13826 5595566 YP_001456698.1 CDS CCC13826_1368 NC_009796.1 12828 13463 R identified by match to protein family HMM TIGR01847; bacteriocin-type signal sequence domain-containing protein complement(12828..13463) Campylobacter concisus 13826 5595567 YP_001456699.1 CDS CCC13826_1414 NC_009796.1 13649 13906 R identified by glimmer; putative; hypothetical protein complement(13649..13906) Campylobacter concisus 13826 5595571 YP_001456700.1 CDS CCC13826_1367 NC_009796.1 14116 14298 D identified by glimmer; putative; hypothetical protein 14116..14298 Campylobacter concisus 13826 5595572 YP_001456701.1 CDS CCC13826_1366 NC_009796.1 14285 14602 D identified by match to protein family HMM PF05713; hypothetical protein 14285..14602 Campylobacter concisus 13826 5595576 YP_001456702.1 CDS CCC13826_1365 NC_009796.1 14592 16457 D identified by match to protein family HMM PF03432; mobilization protein 14592..16457 Campylobacter concisus 13826 5595564 YP_001465925.1 CDS dnaA NC_009802.1 1 1311 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1..1311 Campylobacter concisus 13826 5597548 YP_001465926.1 CDS CCC13826_1852 NC_009802.1 1319 1465 D identified by glimmer; hypothetical protein 1319..1465 Campylobacter concisus 13826 5597370 YP_001465927.1 CDS dnaN NC_009802.1 1465 2532 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1465..2532 Campylobacter concisus 13826 5596909 YP_001465928.1 CDS gyrB NC_009802.1 2550 4859 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 2550..4859 Campylobacter concisus 13826 5596339 YP_001465929.1 CDS CCC13826_1849 NC_009802.1 4878 5474 D identified by match to protein family HMM PF01227; match to protein family HMM TIGR03139; response regulator 4878..5474 Campylobacter concisus 13826 5596525 YP_001465930.1 CDS CCC13826_1848 NC_009802.1 5474 6709 D hypothetical protein 5474..6709 Campylobacter concisus 13826 5596977 YP_001465931.1 CDS CCC13826_1847 NC_009802.1 6907 7341 D hypothetical protein 6907..7341 Campylobacter concisus 13826 5595942 YP_001465932.1 CDS CCC13826_1846 NC_009802.1 7624 8043 R identified by match to protein family HMM PF06271; RDD family protein complement(7624..8043) Campylobacter concisus 13826 5595698 YP_001465933.1 CDS CCC13826_1845 NC_009802.1 8045 8209 R identified by glimmer; hypothetical protein complement(8045..8209) Campylobacter concisus 13826 5596550 YP_001465934.1 CDS purM NC_009802.1 8277 9260 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(8277..9260) Campylobacter concisus 13826 5597011 YP_001465935.1 CDS coaE NC_009802.1 9340 9942 D identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase 9340..9942 Campylobacter concisus 13826 5597516 YP_001465936.1 CDS thiD NC_009802.1 9932 10552 R phosphomethylpyrimidine kinase complement(9932..10552) Campylobacter concisus 13826 5596084 YP_001465937.1 CDS dapF NC_009802.1 10628 11371 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 10628..11371 Campylobacter concisus 13826 5597359 YP_001465938.1 CDS rplT NC_009802.1 11782 12138 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(11782..12138) Campylobacter concisus 13826 5595754 YP_001465939.1 CDS rpmI NC_009802.1 12237 12428 R identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 complement(12237..12428) Campylobacter concisus 13826 5597422 YP_001465940.1 CDS CCC13826_1838 NC_009802.1 12630 14126 D identified by match to protein family HMM PF03577; S-layer-RTX protein 12630..14126 Campylobacter concisus 13826 5596694 YP_001465941.1 CDS CCC13826_2207 NC_009802.1 14162 14287 R identified by glimmer; hypothetical protein complement(14162..14287) Campylobacter concisus 13826 5595725 YP_001465942.1 CDS amyH NC_009802.1 14345 14494 D large repetitive protein 14345..14494 Campylobacter concisus 13826 5597208 YP_001465943.1 CDS CCC13826_1835 NC_009802.1 16954 17412 D identified by glimmer; hypothetical protein 16954..17412 Campylobacter concisus 13826 5595634 YP_001465944.1 CDS CCC13826_1834 NC_009802.1 17417 18301 D DNA-binding protein II 17417..18301 Campylobacter concisus 13826 5597252 YP_001465945.1 CDS CCC13826_1831 NC_009802.1 19366 20070 R identified by match to protein family HMM PF03264; NapC/NirT cytochrome C family, N- region complement(19366..20070) Campylobacter concisus 13826 5597541 YP_001465946.1 CDS CCC13826_1830 NC_009802.1 20067 20501 R flavocytochrome C heme subunit complement(20067..20501) Campylobacter concisus 13826 5596957 YP_001465947.1 CDS azlD NC_009802.1 22403 23821 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; branched-chain amino acid transporter complement(22403..23821) Campylobacter concisus 13826 5597321 YP_001465948.1 CDS CCC13826_1826 NC_009802.1 23910 24425 R hypothetical protein complement(23910..24425) Campylobacter concisus 13826 5597192 YP_001465949.1 CDS CCC13826_1825 NC_009802.1 24466 25650 R identified by match to protein family HMM PF00004; recombination factor protein RarA complement(24466..25650) Campylobacter concisus 13826 5597197 YP_001465950.1 CDS CCC13826_1824 NC_009802.1 25653 26183 R identified by glimmer; hypothetical protein complement(25653..26183) Campylobacter concisus 13826 5597513 YP_001465951.1 CDS CCC13826_1823 NC_009802.1 26263 26556 D hypothetical protein 26263..26556 Campylobacter concisus 13826 5597117 YP_001465952.1 CDS ung NC_009802.1 26558 27250 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(26558..27250) Campylobacter concisus 13826 5597314 YP_001465953.1 CDS CCC13826_1821 NC_009802.1 27313 27888 D identified by match to protein family HMM PF04073; YbaK/prolyl-tRNA synthetases associated domain-containing protein 27313..27888 Campylobacter concisus 13826 5597662 YP_001465954.1 CDS CCC13826_1820 NC_009802.1 28111 28230 R identified by glimmer; hypothetical protein complement(28111..28230) Campylobacter concisus 13826 5596703 YP_001465955.1 CDS thrS NC_009802.1 28230 30050 D catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 28230..30050 Campylobacter concisus 13826 5596067 YP_001465956.1 CDS infC NC_009802.1 30068 30565 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 30068..30565 Campylobacter concisus 13826 5597385 YP_001465957.1 CDS CCC13826_1817 NC_009802.1 31050 31235 R hypothetical protein complement(31050..31235) Campylobacter concisus 13826 5597201 YP_001465958.1 CDS CCC13826_1816 NC_009802.1 31250 31474 D multifunctional CCA protein 31250..31474 Campylobacter concisus 13826 5597061 YP_001465959.1 CDS CCC13826_1815 NC_009802.1 31623 32981 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(31623..32981) Campylobacter concisus 13826 5596385 YP_001465960.1 CDS CCC13826_1814 NC_009802.1 33151 33723 R endonuclease/exonuclease/phosphatase complement(33151..33723) Campylobacter concisus 13826 5595859 YP_001465961.1 CDS CCC13826_1813 NC_009802.1 33823 34752 D identified by match to protein family HMM PF01011; PQQ repeat-containing protein 33823..34752 Campylobacter concisus 13826 5597612 YP_001465962.1 CDS CCC13826_1812 NC_009802.1 34793 36232 R biotin carboxylase; catalyses the carboxylation of the carrier protein which then transfers the carboxyl group to form malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase subunit A complement(34793..36232) Campylobacter concisus 13826 5597126 YP_001465963.1 CDS CCC13826_1811 NC_009802.1 36349 36894 R identified by glimmer; hypothetical protein complement(36349..36894) Campylobacter concisus 13826 5596401 YP_001465964.1 CDS CCC13826_1809 NC_009802.1 37348 37710 R identified by match to protein family HMM PF05154; TM2 complement(37348..37710) Campylobacter concisus 13826 5595994 YP_001465965.1 CDS lspA NC_009802.1 37700 38152 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(37700..38152) Campylobacter concisus 13826 5597160 YP_001465966.1 CDS glmM NC_009802.1 38145 39485 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(38145..39485) Campylobacter concisus 13826 5597052 YP_001465967.1 CDS rpsT NC_009802.1 39643 39912 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 39643..39912 Campylobacter concisus 13826 5597521 YP_001465968.1 CDS prfA NC_009802.1 39927 40994 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 39927..40994 Campylobacter concisus 13826 5597171 YP_001465969.1 CDS CCC13826_1804 NC_009802.1 41306 41725 D identified by match to protein family HMM PF03459; match to protein family HMM TIGR00638; ModE family transcriptional regulator 41306..41725 Campylobacter concisus 13826 5596602 YP_001465970.1 CDS CCC13826_1803 NC_009802.1 42087 43652 D identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR01409; match to protein family HMM TIGR01813; FAD binding domain-containing protein 42087..43652 Campylobacter concisus 13826 5597390 YP_001465971.1 CDS CCC13826_1802 NC_009802.1 43679 43912 R hypothetical protein complement(43679..43912) Campylobacter concisus 13826 5595865 YP_001465972.1 CDS CCC13826_1801 NC_009802.1 43903 44268 R identified by match to protein family HMM PF01219; diacylglycerol kinase (dagk; diglyceride kinase; dgk) complement(43903..44268) Campylobacter concisus 13826 5596783 YP_001465973.1 CDS xth NC_009802.1 44323 45081 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 44323..45081 Campylobacter concisus 13826 5597119 YP_001465974.1 CDS ftsI NC_009802.1 45078 45635 R identified by match to protein family HMM PF02659; cell division protein complement(45078..45635) Campylobacter concisus 13826 5596804 YP_001465975.1 CDS CCC13826_1798 NC_009802.1 45744 46493 D hypothetical protein 45744..46493 Campylobacter concisus 13826 5596221 YP_001465976.1 CDS CCC13826_1796 NC_009802.1 46490 47368 D identified by match to protein family HMM PF00892; permeases of the drug/metabolite transporter 46490..47368 Campylobacter concisus 13826 5595756 YP_001465977.1 CDS flgB NC_009802.1 47365 48090 R identified by match to protein family HMM PF08241; flagellar basal-body rod protein complement(47365..48090) Campylobacter concisus 13826 5596898 YP_001465978.1 CDS CCC13826_1794 NC_009802.1 48137 48529 D CMK; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase; identified by match to protein family HMM PF03061; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 48137..48529 Campylobacter concisus 13826 5597615 YP_001465979.1 CDS CCC13826_1795 NC_009802.1 48520 48894 R SsrA-binding protein complement(48520..48894) Campylobacter concisus 13826 5596260 YP_001465980.1 CDS CCC13826_1793 NC_009802.1 49025 49933 D identified by match to protein family HMM PF01297; carbon storage regulator-like protein 49025..49933 Campylobacter concisus 13826 5596666 YP_001465981.1 CDS CCC13826_1792 NC_009802.1 49936 51429 D identified by match to protein family HMM PF03824; tRNA pseudouridine 55synthase; Psi55 synthase; tRNA-uridine isomerase; tRNApseudouridylate synthase; tRNA pseudouridine synthase B 49936..51429 Campylobacter concisus 13826 5596967 YP_001465982.1 CDS pcrA NC_009802.1 51426 52208 D identified by match to protein family HMM PF00005; ATP-dependent DNA helicase PcrA 51426..52208 Campylobacter concisus 13826 5597546 YP_001465983.1 CDS pepF NC_009802.1 52218 53024 D identified by match to protein family HMM PF00950; oligoendopeptidase F 52218..53024 Campylobacter concisus 13826 5597544 YP_001465984.1 CDS CCC13826_1790 NC_009802.1 53005 54336 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; hypothetical protein complement(53005..54336) Campylobacter concisus 13826 5596648 YP_001465985.1 CDS CCC13826_1787 NC_009802.1 54736 55461 R identified by match to protein family HMM PF03741; S-adenosylmethionine synthetase (methionineadenosyltransferase; AdoMet synthetase; MAT) complement(54736..55461) Campylobacter concisus 13826 5596278 YP_001465986.1 CDS purN NC_009802.1 55454 56044 R identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase complement(55454..56044) Campylobacter concisus 13826 5595826 YP_001465987.1 CDS CCC13826_1785 NC_009802.1 56026 57429 R identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; preprotein translocase, YajC subunit complement(56026..57429) Campylobacter concisus 13826 5597072 YP_001465988.1 CDS CCC13826_1784 NC_009802.1 57431 58936 R identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg chelatase-like protein complement(57431..58936) Campylobacter concisus 13826 5596382 YP_001465989.1 CDS def NC_009802.1 58933 59451 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(58933..59451) Campylobacter concisus 13826 5595864 YP_001465990.1 CDS CCC13826_1782 NC_009802.1 59453 60490 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(59453..60490) Campylobacter concisus 13826 5597260 YP_001465991.1 CDS clpP NC_009802.1 60499 61089 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(60499..61089) Campylobacter concisus 13826 5596952 YP_001465992.1 CDS tig NC_009802.1 61089 62420 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(61089..62420) Campylobacter concisus 13826 5596983 YP_001465993.1 CDS CCC13826_1779 NC_009802.1 62410 62574 D GGDEF domain-containing protein 62410..62574 Campylobacter concisus 13826 5596436 YP_001465994.1 CDS folE NC_009802.1 62558 63130 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 62558..63130 Campylobacter concisus 13826 5596480 YP_001465995.1 CDS fliI NC_009802.1 63127 64434 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 63127..64434 Campylobacter concisus 13826 5597038 YP_001465996.1 CDS CCC13826_1776 NC_009802.1 64467 65132 R ATPase complement(64467..65132) Campylobacter concisus 13826 5596295 YP_001465997.1 CDS CCC13826_1775 NC_009802.1 65129 66202 R endonuclease III complement(65129..66202) Campylobacter concisus 13826 5597438 YP_001465998.1 CDS cysK NC_009802.1 66218 67960 R identified by match to protein family HMM PF00004; cysteine synthase A complement(66218..67960) Campylobacter concisus 13826 5597414 YP_001465999.1 CDS cysE NC_009802.1 67960 69627 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(67960..69627) Campylobacter concisus 13826 5596917 YP_001466000.1 CDS CCC13826_1772 NC_009802.1 69636 70877 R identified by match to protein family HMM PF03349; outer membrane protein transporter (ompp1/fadl/todx) complement(69636..70877) Campylobacter concisus 13826 5597301 YP_001466001.1 CDS CCC13826_1105 NC_009802.1 71722 72192 R hypothetical protein complement(71722..72192) Campylobacter concisus 13826 5596948 YP_001466002.1 CDS CCC13826_1107 NC_009802.1 72544 74961 R identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM TIGR00229; mechanosensitive ion channel family protein complement(72544..74961) Campylobacter concisus 13826 5596463 YP_001466003.1 CDS CCC13826_1108 NC_009802.1 74954 75817 R identified by match to protein family HMM PF03150; cytochrome C551 peroxidase (cytochrome Cperoxidase; CCP) complement(74954..75817) Campylobacter concisus 13826 5597363 YP_001466004.1 CDS CCC13826_1109 NC_009802.1 75965 76426 D hypothetical protein 75965..76426 Campylobacter concisus 13826 5595590 YP_001466005.1 CDS CCC13826_1110 NC_009802.1 76552 77022 D identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; N-terminal methylation domain-containing protein 76552..77022 Campylobacter concisus 13826 5596911 YP_001466006.1 CDS CCC13826_1116 NC_009802.1 77673 77798 D ABC transporter periplasmic substrate-binding protein 77673..77798 Campylobacter concisus 13826 5596245 YP_001466007.1 CDS CCC13826_1117 NC_009802.1 78363 78500 D ABC transporter ATP-binding protein 78363..78500 Campylobacter concisus 13826 5597439 YP_001466008.1 CDS CCC13826_2215 NC_009802.1 78666 78785 R identified by glimmer; hypothetical protein complement(78666..78785) Campylobacter concisus 13826 5597031 YP_001466009.1 CDS CCC13826_1118 NC_009802.1 78775 78936 R identified by glimmer; hypothetical protein complement(78775..78936) Campylobacter concisus 13826 5596654 YP_001466010.1 CDS CCC13826_1119 NC_009802.1 79367 81808 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01409; hypothetical protein complement(79367..81808) Campylobacter concisus 13826 5595905 YP_001466011.1 CDS CCC13826_1120 NC_009802.1 81829 82398 R cytochrome C haem-binding periplasmic protein complement(81829..82398) Campylobacter concisus 13826 5596995 YP_001466012.1 CDS flgD NC_009802.1 84172 84879 R acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein complement(84172..84879) Campylobacter concisus 13826 5597215 YP_001466013.1 CDS hydD NC_009802.1 84888 86288 R quinone-reactive Ni/Fe hydrogenase complement(84888..86288) Campylobacter concisus 13826 5595922 YP_001466014.1 CDS typA NC_009802.1 86450 88252 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA/BipA 86450..88252 Campylobacter concisus 13826 5596863 YP_001466015.1 CDS hydB NC_009802.1 88335 88505 R quinone-reactive Ni/Fe hydrogenase, large subunit complement(88335..88505) Campylobacter concisus 13826 5597255 YP_001466016.1 CDS hydA NC_009802.1 88800 88928 R quinone-reactive Ni/Fe hydrogenase, small subunit complement(88800..88928) Campylobacter concisus 13826 5596720 YP_001466017.1 CDS CCC13826_1127 NC_009802.1 89151 89573 R hypothetical protein complement(89151..89573) Campylobacter concisus 13826 5597508 YP_001466018.1 CDS CCC13826_1128 NC_009802.1 89551 90453 R identified by match to protein family HMM PF00892; phosphate acetyltransferase (phosphotransacetylase) complement(89551..90453) Campylobacter concisus 13826 5596019 YP_001466019.1 CDS CCC13826_1129 NC_009802.1 90459 91136 R identified by match to protein family HMM PF05643; lipoprotein complement(90459..91136) Campylobacter concisus 13826 5597505 YP_001466020.1 CDS xerC NC_009802.1 91126 91530 R integrase/recombinase complement(91126..91530) Campylobacter concisus 13826 5595783 YP_001466021.1 CDS CCC13826_1131 NC_009802.1 91515 92183 R identified by match to protein family HMM PF03783; curli production assembly/transport component CsgG subfamily protein complement(91515..92183) Campylobacter concisus 13826 5596136 YP_001466022.1 CDS CCC13826_1132 NC_009802.1 92228 93568 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; mate efflux family protein complement(92228..93568) Campylobacter concisus 13826 5597132 YP_001466023.1 CDS CCC13826_1133 NC_009802.1 93720 94499 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase_ 93720..94499 Campylobacter concisus 13826 5596502 YP_001466024.1 CDS murF NC_009802.1 94486 95643 D identified by match to protein family HMM PF06050; UDP-MurNac-pentapeptide presynthetase 94486..95643 Campylobacter concisus 13826 5597114 YP_001466025.1 CDS CCC13826_1135 NC_009802.1 95667 95936 D identified by glimmer; hypothetical protein 95667..95936 Campylobacter concisus 13826 5596897 YP_001466026.1 CDS CCC13826_1136 NC_009802.1 96039 96701 R identified by glimmer; hypothetical protein complement(96039..96701) Campylobacter concisus 13826 5596240 YP_001466027.1 CDS purF NC_009802.1 96698 98035 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(96698..98035) Campylobacter concisus 13826 5596567 YP_001466028.1 CDS dapB NC_009802.1 98306 99076 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(98306..99076) Campylobacter concisus 13826 5597262 YP_001466029.1 CDS CCC13826_1139 NC_009802.1 99293 99430 R hypothetical protein complement(99293..99430) Campylobacter concisus 13826 5595897 YP_001466030.1 CDS trxB NC_009802.1 99649 100587 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase complement(99649..100587) Campylobacter concisus 13826 5596120 YP_001466031.1 CDS CCC13826_1141 NC_009802.1 100597 101043 R hypothetical protein complement(100597..101043) Campylobacter concisus 13826 5596051 YP_001466032.1 CDS trx NC_009802.1 101043 101357 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(101043..101357) Campylobacter concisus 13826 5597703 YP_001466033.1 CDS CCC13826_1143 NC_009802.1 101431 101772 R dihydroorotate oxidase; dhodehase; dhodase; dhod; identified by match to protein family HMM PF02021; hypothetical protein complement(101431..101772) Campylobacter concisus 13826 5596603 YP_001466034.1 CDS CCC13826_1144 NC_009802.1 101774 103036 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(101774..103036) Campylobacter concisus 13826 5596749 YP_001466035.1 CDS CCC13826_1145 NC_009802.1 103033 104241 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(103033..104241) Campylobacter concisus 13826 5596504 YP_001466036.1 CDS CCC13826_1146 NC_009802.1 104251 105033 R identified by glimmer; hypothetical protein complement(104251..105033) Campylobacter concisus 13826 5595810 YP_001466037.1 CDS pgsA NC_009802.1 105027 105962 R phosphatidylglycerophosphate synthase complement(105027..105962) Campylobacter concisus 13826 5596230 YP_001466038.1 CDS CCC13826_1148 NC_009802.1 105955 106635 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase complement(105955..106635) Campylobacter concisus 13826 5596469 YP_001466039.1 CDS CCC13826_1149 NC_009802.1 106736 107551 R identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; hypothetical protein complement(106736..107551) Campylobacter concisus 13826 5596851 YP_001466040.1 CDS rpmE NC_009802.1 107555 107755 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(107555..107755) Campylobacter concisus 13826 5596145 YP_001466041.1 CDS CCC13826_1151 NC_009802.1 107837 108493 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(107837..108493) Campylobacter concisus 13826 5595621 YP_001466042.1 CDS CCC13826_1152 NC_009802.1 108494 108895 R hypothetical protein complement(108494..108895) Campylobacter concisus 13826 5595937 YP_001466043.1 CDS CCC13826_1154 NC_009802.1 109095 109676 R 6-pyruvoyl tetrahydrobiopterin synthase (ptps; ptp synthase) complement(109095..109676) Campylobacter concisus 13826 5597657 YP_001466044.1 CDS CCC13826_1155 NC_009802.1 109676 110431 R identified by match to protein family HMM PF04055; saicar synthetase; vegetative protein 286a; a; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(109676..110431) Campylobacter concisus 13826 5596052 YP_001466045.1 CDS moaA NC_009802.1 110431 111399 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(110431..111399) Campylobacter concisus 13826 5597520 YP_001466046.1 CDS CCC13826_1157 NC_009802.1 111534 112040 R hypothetical protein complement(111534..112040) Campylobacter concisus 13826 5596692 YP_001466047.1 CDS CCC13826_1158 NC_009802.1 112050 112571 R hypothetical protein complement(112050..112571) Campylobacter concisus 13826 5596237 YP_001466048.1 CDS ubiA NC_009802.1 112568 113428 R UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase complement(112568..113428) Campylobacter concisus 13826 5597365 YP_001466049.1 CDS CCC13826_1160 NC_009802.1 113532 114746 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 113532..114746 Campylobacter concisus 13826 5596577 YP_001466050.1 CDS miaA NC_009802.1 114749 115624 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 114749..115624 Campylobacter concisus 13826 5596864 YP_001466051.1 CDS ilvH NC_009802.1 115701 116693 R identified by match to protein family HMM PF01106; match to protein family HMM PF01592; match to protein family HMM PF04324; acetolactate synthase small subunit complement(115701..116693) Campylobacter concisus 13826 5597603 YP_001466052.1 CDS nifS NC_009802.1 116710 117900 R identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR03403; NifS family cysteine desulfurase complement(116710..117900) Campylobacter concisus 13826 5596405 YP_001466053.1 CDS CCC13826_1164 NC_009802.1 118018 118134 D identified by glimmer; hypothetical protein 118018..118134 Campylobacter concisus 13826 5597256 YP_001466054.1 CDS CCC13826_1165 NC_009802.1 118217 118864 D tRNA 2-selenouridine synthase 118217..118864 Campylobacter concisus 13826 5595997 YP_001466055.1 CDS CCC13826_1166 NC_009802.1 118864 119001 D Hit family protein 118864..119001 Campylobacter concisus 13826 5596993 YP_001466056.1 CDS CCC13826_1167 NC_009802.1 119104 119712 D identified by glimmer; hypothetical protein 119104..119712 Campylobacter concisus 13826 5597102 YP_001466057.1 CDS CCC13826_1168 NC_009802.1 119715 119870 D identified by glimmer; hypothetical protein 119715..119870 Campylobacter concisus 13826 5597474 YP_001466058.1 CDS CCC13826_1169 NC_009802.1 119867 120469 D hypothetical protein 119867..120469 Campylobacter concisus 13826 5596347 YP_001466059.1 CDS CCC13826_1170 NC_009802.1 120469 124062 D methyltransferase small 120469..124062 Campylobacter concisus 13826 5596234 YP_001466060.1 CDS CCC13826_1171 NC_009802.1 124087 127854 D identified by glimmer; hypothetical protein 124087..127854 Campylobacter concisus 13826 5597042 YP_001466061.1 CDS trxB NC_009802.1 127858 129219 D thioredoxin reductase 127858..129219 Campylobacter concisus 13826 5597165 YP_001466062.1 CDS dhs NC_009802.1 129238 130068 D 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 129238..130068 Campylobacter concisus 13826 5596655 YP_001466063.1 CDS CCC13826_1174 NC_009802.1 130072 131430 D hypothetical protein 130072..131430 Campylobacter concisus 13826 5596837 YP_001466064.1 CDS CCC13826_1175 NC_009802.1 131449 132273 D hypothetical protein 131449..132273 Campylobacter concisus 13826 5597161 YP_001466065.1 CDS CCC13826_1176 NC_009802.1 132370 133632 D hypothetical protein 132370..133632 Campylobacter concisus 13826 5597600 YP_001466066.1 CDS CCC13826_1177 NC_009802.1 133748 134215 D identified by match to protein family HMM TIGR03352; type VI secretion lipoprotein 133748..134215 Campylobacter concisus 13826 5595833 YP_001466067.1 CDS CCC13826_1178 NC_009802.1 134253 135611 D identified by match to protein family HMM PF05936; match to protein family HMM TIGR03353; type VI secretion protein 134253..135611 Campylobacter concisus 13826 5597353 YP_001466068.1 CDS CCC13826_1179 NC_009802.1 135621 136385 D identified by match to protein family HMM TIGR03349; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) 135621..136385 Campylobacter concisus 13826 5596066 YP_001466069.1 CDS CCC13826_1180 NC_009802.1 136386 137666 D nucleobase:cation symporter 136386..137666 Campylobacter concisus 13826 5596867 YP_001466070.1 CDS CCC13826_1181 NC_009802.1 137747 138232 D identified by match to protein family HMM PF05591; match to protein family HMM TIGR03358; type VI secretion protein 137747..138232 Campylobacter concisus 13826 5596024 YP_001466071.1 CDS CCC13826_1182 NC_009802.1 138235 139683 D identified by match to protein family HMM PF05943; match to protein family HMM TIGR03355; EvpB family type VI secretion protein 138235..139683 Campylobacter concisus 13826 5596696 YP_001466072.1 CDS CCC13826_1183 NC_009802.1 139692 140081 D hypothetical protein 139692..140081 Campylobacter concisus 13826 5596815 YP_001466073.1 CDS CCC13826_1187 NC_009802.1 146268 147185 D hypothetical protein 146268..147185 Campylobacter concisus 13826 5596989 YP_001466074.1 CDS CCC13826_1188 NC_009802.1 147250 147771 D secreted protein Hcp 147250..147771 Campylobacter concisus 13826 5597070 YP_001466075.1 CDS CCC13826_1189 NC_009802.1 147881 148441 D identified by glimmer; hypothetical protein 147881..148441 Campylobacter concisus 13826 5596333 YP_001466076.1 CDS CCC13826_1190 NC_009802.1 148507 148983 D hypothetical protein 148507..148983 Campylobacter concisus 13826 5595752 YP_001466077.1 CDS CCC13826_1191 NC_009802.1 148983 149411 D transcription antitermination protein NusG 148983..149411 Campylobacter concisus 13826 5596093 YP_001466078.1 CDS CCC13826_1192 NC_009802.1 149401 150036 D identified by glimmer; hypothetical protein 149401..150036 Campylobacter concisus 13826 5595655 YP_001466079.1 CDS CCC13826_1193 NC_009802.1 150099 150578 D identified by glimmer; hypothetical protein 150099..150578 Campylobacter concisus 13826 5596348 YP_001466080.1 CDS CCC13826_1195 NC_009802.1 151440 154022 D identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646; match to protein family HMM TIGR03361; ribosomal protein L7/L12 151440..154022 Campylobacter concisus 13826 5596025 YP_001466081.1 CDS CCC13826_1196 NC_009802.1 154041 154541 D bifunctional DNA-directed RNA polymerase, beta and beta' chain 154041..154541 Campylobacter concisus 13826 5597246 YP_001466082.1 CDS CCC13826_1197 NC_009802.1 155027 157867 D RNAp beta'subunit; transcriptase beta' chain; RNA polymerase beta' subunit; DNA-directed RNA polymerase beta' chain 155027..157867 Campylobacter concisus 13826 5596583 YP_001466083.1 CDS CCC13826_1198 NC_009802.1 157864 158466 D identified by glimmer; hypothetical protein 157864..158466 Campylobacter concisus 13826 5596446 YP_001466084.1 CDS nhaC NC_009802.1 158640 159350 D identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Na+/H+ antiporter NhaC 158640..159350 Campylobacter concisus 13826 5597690 YP_001466085.1 CDS CCC13826_1637 NC_009802.1 159478 159705 R isoaspartyl dipeptidase complement(159478..159705) Campylobacter concisus 13826 5597332 YP_001466086.1 CDS CCC13826_1638 NC_009802.1 159727 161109 R identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; 30S ribosomal protein S12 complement(159727..161109) Campylobacter concisus 13826 5597497 YP_001466087.1 CDS CCC13826_1639 NC_009802.1 161099 164224 R multidrug resistance protein MdtF complement(161099..164224) Campylobacter concisus 13826 5597412 YP_001466088.1 CDS CCC13826_1640 NC_009802.1 164235 165395 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; CmeA complement(164235..165395) Campylobacter concisus 13826 5596144 YP_001466089.1 CDS CCC13826_1641 NC_009802.1 165697 166134 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(165697..166134) Campylobacter concisus 13826 5597514 YP_001466090.1 CDS ccoG NC_009802.1 166165 167490 R identified by match to protein family HMM PF00037; match to protein family HMM TIGR02745; cytochrome C oxidase accessory protein CcoG complement(166165..167490) Campylobacter concisus 13826 5596794 YP_001466091.1 CDS CCC13826_1643 NC_009802.1 167595 169070 D identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM TIGR01409; match to protein family HMM TIGR01813; FAD binding domain-containing protein 167595..169070 Campylobacter concisus 13826 5597336 YP_001466092.1 CDS CCC13826_1644 NC_009802.1 169277 169405 D identified by glimmer; hypothetical protein 169277..169405 Campylobacter concisus 13826 5596908 YP_001466093.1 CDS CCC13826_1645 NC_009802.1 169445 170077 D phage integrase 169445..170077 Campylobacter concisus 13826 5596624 YP_001466094.1 CDS CCC13826_1646 NC_009802.1 170074 170691 D identified by glimmer; hypothetical protein 170074..170691 Campylobacter concisus 13826 5597091 YP_001466095.1 CDS CCC13826_1647 NC_009802.1 170694 171875 D identified by match to protein family HMM PF03738; glutathionylspermidine synthase subfamily protein 170694..171875 Campylobacter concisus 13826 5595933 YP_001466096.1 CDS CCC13826_1648 NC_009802.1 171878 172807 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase catalytic subunit 171878..172807 Campylobacter concisus 13826 5597580 YP_001466097.1 CDS CCC13826_1649 NC_009802.1 172811 173308 D nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 172811..173308 Campylobacter concisus 13826 5597096 YP_001466098.1 CDS CCC13826_1652 NC_009802.1 174671 176119 D identified by glimmer; hypothetical protein 174671..176119 Campylobacter concisus 13826 5596621 YP_001466099.1 CDS CCC13826_1653 NC_009802.1 176131 177450 D identified by glimmer; hypothetical protein 176131..177450 Campylobacter concisus 13826 5595845 YP_001466100.1 CDS CCC13826_1654 NC_009802.1 177637 179001 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 177637..179001 Campylobacter concisus 13826 5595629 YP_001466101.1 CDS CCC13826_1655 NC_009802.1 179001 180635 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR01194; ABC transporter ATP-binding protein 179001..180635 Campylobacter concisus 13826 5597186 YP_001466102.1 CDS CCC13826_1656 NC_009802.1 180743 181132 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit A 180743..181132 Campylobacter concisus 13826 5597094 YP_001466103.1 CDS CCC13826_1657 NC_009802.1 181114 181626 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 181114..181626 Campylobacter concisus 13826 5595829 YP_001466104.1 CDS CCC13826_1660 NC_009802.1 183610 183840 D hypothetical protein 183610..183840 Campylobacter concisus 13826 5596492 YP_001466105.1 CDS CCC13826_1661 NC_009802.1 183837 184547 D hypothetical protein 183837..184547 Campylobacter concisus 13826 5596663 YP_001466106.1 CDS CCC13826_1662 NC_009802.1 184544 186844 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 184544..186844 Campylobacter concisus 13826 5595773 YP_001466107.1 CDS CCC13826_1663 NC_009802.1 186837 187832 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 186837..187832 Campylobacter concisus 13826 5595821 YP_001466108.1 CDS CCC13826_1664 NC_009802.1 187841 188479 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 187841..188479 Campylobacter concisus 13826 5596825 YP_001466109.1 CDS CCC13826_1667 NC_009802.1 189311 191149 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 189311..191149 Campylobacter concisus 13826 5595867 YP_001466110.1 CDS CCC13826_1668 NC_009802.1 191149 192660 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 191149..192660 Campylobacter concisus 13826 5597264 YP_001466111.1 CDS fdhD NC_009802.1 192657 194147 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 192657..194147 Campylobacter concisus 13826 5595613 YP_001466112.1 CDS CCC13826_1670 NC_009802.1 194131 196539 D hypothetical protein 194131..196539 Campylobacter concisus 13826 5597020 YP_001466113.1 CDS CCC13826_1677 NC_009802.1 198222 198788 D identified by glimmer; hypothetical protein 198222..198788 Campylobacter concisus 13826 5596811 YP_001466114.1 CDS CCC13826_1678 NC_009802.1 198785 199123 D aminotransferase 198785..199123 Campylobacter concisus 13826 5597066 YP_001466115.1 CDS CCC13826_1679 NC_009802.1 199166 199921 R identified by glimmer; hypothetical protein complement(199166..199921) Campylobacter concisus 13826 5596737 YP_001466116.1 CDS CCC13826_0608 NC_009802.1 200366 202138 D identified by match to protein family HMM PF03865; ATP phosphoribosyltransferase (ATP-PRTase; ATP-PRT) 200366..202138 Campylobacter concisus 13826 5596047 YP_001466117.1 CDS CCC13826_2335 NC_009802.1 202148 209200 D identified by match to protein family HMM PF05594; match to protein family HMM PF05860; match to protein family HMM TIGR01731; match to protein family HMM TIGR01901; transcriptional activator 202148..209200 Campylobacter concisus 13826 5595671 YP_001466118.1 CDS CCC13826_1683 NC_009802.1 209474 209677 D identified by glimmer; hypothetical protein 209474..209677 Campylobacter concisus 13826 5596522 YP_001466119.1 CDS CCC13826_1684 NC_009802.1 209818 209958 D identified by glimmer; hypothetical protein 209818..209958 Campylobacter concisus 13826 5597417 YP_001466120.1 CDS CCC13826_1685 NC_009802.1 209928 210086 D hypothetical protein 209928..210086 Campylobacter concisus 13826 5596149 YP_001466121.1 CDS CCC13826_1687 NC_009802.1 210337 212679 D aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (Asp/Glu-ADT subunit C) 210337..212679 Campylobacter concisus 13826 5595978 YP_001466122.1 CDS CCC13826_1688 NC_009802.1 212688 213008 D hypothetical protein 212688..213008 Campylobacter concisus 13826 5595936 YP_001466123.1 CDS CCC13826_1689 NC_009802.1 213014 213520 D identified by glimmer; hypothetical protein 213014..213520 Campylobacter concisus 13826 5595854 YP_001466124.1 CDS CCC13826_1690 NC_009802.1 213850 214380 D identified by glimmer; hypothetical protein 213850..214380 Campylobacter concisus 13826 5596799 YP_001466125.1 CDS CCC13826_1691 NC_009802.1 214802 214918 D lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) 214802..214918 Campylobacter concisus 13826 5597122 YP_001466126.1 CDS CCC13826_1692 NC_009802.1 214999 215460 D serine hydroxymethyltransferase (serine methylase; shmt) 214999..215460 Campylobacter concisus 13826 5595589 YP_001466127.1 CDS CCC13826_1952 NC_009802.1 215959 217914 D hypothetical protein 215959..217914 Campylobacter concisus 13826 5597006 YP_001466128.1 CDS CCC13826_2222 NC_009802.1 218249 218614 D identified by glimmer; hypothetical protein 218249..218614 Campylobacter concisus 13826 5596358 YP_001466129.1 CDS CCC13826_1951 NC_009802.1 218803 219216 D shikimate dehydrogenase 218803..219216 Campylobacter concisus 13826 5596207 YP_001466130.1 CDS CCC13826_1950 NC_009802.1 220138 220431 D identified by glimmer; hypothetical protein 220138..220431 Campylobacter concisus 13826 5597583 YP_001466131.1 CDS CCC13826_2223 NC_009802.1 220462 220599 D arylsulfotransferase 220462..220599 Campylobacter concisus 13826 5596946 YP_001466132.1 CDS nrtD NC_009802.1 221031 221207 D nitrate transporter NrtD 221031..221207 Campylobacter concisus 13826 5597554 YP_001466133.1 CDS CCC13826_1948 NC_009802.1 221489 221740 D binding-protein-dependent transporters inner membrane component 221489..221740 Campylobacter concisus 13826 5596539 YP_001466134.1 CDS CCC13826_1947 NC_009802.1 221870 222079 D identified by glimmer; hypothetical protein 221870..222079 Campylobacter concisus 13826 5596856 YP_001466135.1 CDS CCC13826_1946 NC_009802.1 222092 222529 D identified by glimmer; hypothetical protein 222092..222529 Campylobacter concisus 13826 5595861 YP_001466136.1 CDS CCC13826_1945 NC_009802.1 222568 223074 D carbon monoxide dehydrogenase 1 (codh 1) 222568..223074 Campylobacter concisus 13826 5595885 YP_001466137.1 CDS CCC13826_1944 NC_009802.1 223140 223544 D hypothetical protein 223140..223544 Campylobacter concisus 13826 5597558 YP_001466138.1 CDS CCC13826_1943 NC_009802.1 223947 224135 D hypothetical protein 223947..224135 Campylobacter concisus 13826 5595873 YP_001466139.1 CDS CCC13826_1942 NC_009802.1 224171 224509 D identified by glimmer; hypothetical protein 224171..224509 Campylobacter concisus 13826 5597342 YP_001466140.1 CDS CCC13826_1941 NC_009802.1 224909 225082 D uracil phosphoribosyltransferase 224909..225082 Campylobacter concisus 13826 5595732 YP_001466141.1 CDS CCC13826_1940 NC_009802.1 225088 225483 D NADP-dependent malic enzyme (NADP-me) 225088..225483 Campylobacter concisus 13826 5596882 YP_001466142.1 CDS CCC13826_1939 NC_009802.1 225533 226360 D identified by glimmer; hypothetical protein 225533..226360 Campylobacter concisus 13826 5596710 YP_001466143.1 CDS CCC13826_1938 NC_009802.1 226435 227193 D periplasmic protein 226435..227193 Campylobacter concisus 13826 5596420 YP_001466144.1 CDS CCC13826_1936 NC_009802.1 228774 231557 D identified by glimmer; hypothetical protein 228774..231557 Campylobacter concisus 13826 5597253 YP_001466145.1 CDS CCC13826_1935 NC_009802.1 231762 232268 R Mug G:T/U mismatch-specific DNA glycosylase complement(231762..232268) Campylobacter concisus 13826 5596729 YP_001466146.1 CDS CCC13826_1934 NC_009802.1 232189 232314 D diguanylate cyclase/phosphodiesterase 232189..232314 Campylobacter concisus 13826 5596544 YP_001466147.1 CDS nifJ NC_009802.1 232366 235944 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate:ferredoxin (flavodoxin) oxidoreductase complement(232366..235944) Campylobacter concisus 13826 5596576 YP_001466148.1 CDS CCC13826_1932 NC_009802.1 236101 237267 D identified by match to protein family HMM PF07690; sugar efflux transporter 236101..237267 Campylobacter concisus 13826 5597055 YP_001466149.1 CDS CCC13826_1931 NC_009802.1 237405 237716 D hypothetical protein 237405..237716 Campylobacter concisus 13826 5596978 YP_001466150.1 CDS CCC13826_1930 NC_009802.1 237720 238433 D UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase) 237720..238433 Campylobacter concisus 13826 5596238 YP_001466151.1 CDS CCC13826_1929 NC_009802.1 238445 238936 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 238445..238936 Campylobacter concisus 13826 5597689 YP_001466152.1 CDS CCC13826_1928 NC_009802.1 238965 239702 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(238965..239702) Campylobacter concisus 13826 5597623 YP_001466153.1 CDS CCC13826_1927 NC_009802.1 239702 240370 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamine-binding periplasmic protein/glutamine transporter permease complement(239702..240370) Campylobacter concisus 13826 5596368 YP_001466154.1 CDS CCC13826_1926 NC_009802.1 240394 241146 R identified by match to protein family HMM PF00497; solute-binding family 1 protein complement(240394..241146) Campylobacter concisus 13826 5596177 YP_001466155.1 CDS CCC13826_1925 NC_009802.1 241156 241908 R identified by match to protein family HMM PF00497; solute-binding family 1 protein complement(241156..241908) Campylobacter concisus 13826 5597305 YP_001466156.1 CDS CCC13826_1924 NC_009802.1 241918 242697 R identified by match to protein family HMM PF00497; glutamine-binding periplasmic protein/glutamine transporter permease complement(241918..242697) Campylobacter concisus 13826 5596617 YP_001466157.1 CDS CCC13826_1923 NC_009802.1 242842 246294 R identified by glimmer; 2-acyl-glycerophospho-ethanolamine acyltransferase complement(242842..246294) Campylobacter concisus 13826 5595784 YP_001466158.1 CDS CCC13826_1922 NC_009802.1 246466 248328 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 246466..248328 Campylobacter concisus 13826 5596890 YP_001466159.1 CDS petA NC_009802.1 248692 249195 D identified by match to protein family HMM PF00355; match to protein family HMM TIGR01416; ubiquinol-cytochrome C reductase, iron-sulfur subunit 248692..249195 Campylobacter concisus 13826 5595848 YP_001466160.1 CDS CCC13826_1920 NC_009802.1 249206 250450 D identified by match to protein family HMM PF00032; match to protein family HMM PF00033; cytochrome B(N-)/b6/PetB subfamily protein 249206..250450 Campylobacter concisus 13826 5595585 YP_001466161.1 CDS CCC13826_1919 NC_009802.1 250453 251493 D identified by match to protein family HMM PF00034; cytochrome C subfamily protein 250453..251493 Campylobacter concisus 13826 5596418 YP_001466162.1 CDS CCC13826_2224 NC_009802.1 252364 252507 D identified by glimmer; hypothetical protein 252364..252507 Campylobacter concisus 13826 5597566 YP_001466163.1 CDS CCC13826_1918 NC_009802.1 252458 252592 D identified by glimmer; hypothetical protein 252458..252592 Campylobacter concisus 13826 5596747 YP_001466164.1 CDS CCC13826_1917 NC_009802.1 252607 252894 R hypothetical protein complement(252607..252894) Campylobacter concisus 13826 5597047 YP_001466165.1 CDS CCC13826_1916 NC_009802.1 252939 254024 R lipoprotein complement(252939..254024) Campylobacter concisus 13826 5596814 YP_001466166.1 CDS CCC13826_1915 NC_009802.1 254441 255010 D identified by match to protein family HMM PF00037; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 254441..255010 Campylobacter concisus 13826 5596973 YP_001466167.1 CDS CCC13826_1914 NC_009802.1 255012 256979 D L-alanyl-D-glutamate peptidase 255012..256979 Campylobacter concisus 13826 5596827 YP_001466168.1 CDS yyaQ NC_009802.1 256989 257909 D identified by match to protein family HMM PF00146; hypothetical protein 256989..257909 Campylobacter concisus 13826 5596817 YP_001466169.1 CDS hyfE NC_009802.1 257911 258555 D interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide; hydrogenase 4 membrane subunit 257911..258555 Campylobacter concisus 13826 5595868 YP_001466170.1 CDS CCC13826_1911 NC_009802.1 258558 260039 D identified by glimmer; hypothetical protein 258558..260039 Campylobacter concisus 13826 5595866 YP_001466171.1 CDS tag NC_009802.1 260036 261772 D identified by match to protein family HMM PF00329; match to protein family HMM PF00346; DNA-3-methyladenine glycosylase I 260036..261772 Campylobacter concisus 13826 5595772 YP_001466172.1 CDS CCC13826_0712 NC_009802.1 261769 262308 D electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; formate hydrogenlyase complex iron-sulfur subunit 261769..262308 Campylobacter concisus 13826 5597135 YP_001466173.1 CDS CCC13826_0713 NC_009802.1 262305 263129 D identified by match to protein family HMM PF01058; hydrogenase-4 component I 262305..263129 Campylobacter concisus 13826 5596045 YP_001466174.1 CDS CCC13826_0714 NC_009802.1 263126 263470 D hypothetical protein 263126..263470 Campylobacter concisus 13826 5595611 YP_001466175.1 CDS CCC13826_0715 NC_009802.1 263470 263916 D identified by match to protein family HMM TIGR00072; hydrogenase maturation protease superfamily 263470..263916 Campylobacter concisus 13826 5597220 YP_001466176.1 CDS CCC13826_0716 NC_009802.1 264100 264960 D identified by match to protein family HMM PF01226; formate/nitrite transporter 264100..264960 Campylobacter concisus 13826 5596287 YP_001466177.1 CDS CCC13826_0717 NC_009802.1 265209 265649 D isoleucyl-tRNA synthetase (isoleucine--tRNA ligase; IleRS) 265209..265649 Campylobacter concisus 13826 5595813 YP_001466178.1 CDS CCC13826_0718 NC_009802.1 265699 266250 D identified by match to protein family HMM PF04368; competence/damage-inducible domain-containing protein 265699..266250 Campylobacter concisus 13826 5597146 YP_001466179.1 CDS CCC13826_0720 NC_009802.1 267391 268035 D hypothetical protein 267391..268035 Campylobacter concisus 13826 5596859 YP_001466180.1 CDS CCC13826_0721 NC_009802.1 268028 268768 D identified by match to protein family HMM PF02518; hypothetical protein 268028..268768 Campylobacter concisus 13826 5595802 YP_001466181.1 CDS CCC13826_0722 NC_009802.1 268761 269444 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 268761..269444 Campylobacter concisus 13826 5596906 YP_001466182.1 CDS CCC13826_0725 NC_009802.1 271702 271914 D identified by match to protein family HMM TIGR02736; cytochrome C oxidase Cbb3-type, CcoQ subunit 271702..271914 Campylobacter concisus 13826 5597141 YP_001466183.1 CDS ccoP NC_009802.1 271902 272765 D identified by match to protein family HMM PF00034; match to protein family HMM TIGR00782; cytochrome C oxidase Cbb3-type, subunit III 271902..272765 Campylobacter concisus 13826 5597145 YP_001466184.1 CDS CCC13826_0727 NC_009802.1 272765 272980 D hypothetical protein 272765..272980 Campylobacter concisus 13826 5597483 YP_001466185.1 CDS CCC13826_0728 NC_009802.1 273036 273653 D hypothetical protein 273036..273653 Campylobacter concisus 13826 5595699 YP_001466186.1 CDS CCC13826_0730 NC_009802.1 273646 274116 D lipoprotein 273646..274116 Campylobacter concisus 13826 5596466 YP_001466187.1 CDS CCC13826_0729 NC_009802.1 274086 274208 R identified by glimmer; hypothetical protein complement(274086..274208) Campylobacter concisus 13826 5596148 YP_001466188.1 CDS nhaA NC_009802.1 274354 275583 R exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter complement(274354..275583) Campylobacter concisus 13826 5597489 YP_001466189.1 CDS pcm NC_009802.1 275771 276199 D protein-L-isoaspartate O-methyltransferase 275771..276199 Campylobacter concisus 13826 5596686 YP_001466190.1 CDS CCC13826_0734 NC_009802.1 276265 276405 D identified by glimmer; hypothetical protein 276265..276405 Campylobacter concisus 13826 5597626 YP_001466191.1 CDS CCC13826_0735 NC_009802.1 276362 278707 D hypothetical protein 276362..278707 Campylobacter concisus 13826 5596395 YP_001466192.1 CDS nrdB NC_009802.1 278704 281523 D identified by match to protein family HMM PF00580; recombination protein RecB 278704..281523 Campylobacter concisus 13826 5595642 YP_001466193.1 CDS rplM NC_009802.1 281604 282032 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 281604..282032 Campylobacter concisus 13826 5597156 YP_001466194.1 CDS rpsI NC_009802.1 282035 282424 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 282035..282424 Campylobacter concisus 13826 5596604 YP_001466195.1 CDS CCC13826_0739 NC_009802.1 282580 283593 D identified by match to protein family HMM PF00691; outer membrane fibronectin-binding protein 282580..283593 Campylobacter concisus 13826 5596540 YP_001466196.1 CDS CCC13826_0740 NC_009802.1 283666 284304 D identified by glimmer; hypothetical protein 283666..284304 Campylobacter concisus 13826 5596292 YP_001466197.1 CDS CCC13826_0741 NC_009802.1 284612 284884 D identified by match to protein family HMM PF02142; carbamoyl-phosphate synthase large subunit 284612..284884 Campylobacter concisus 13826 5596476 YP_001466198.1 CDS CCC13826_0742 NC_009802.1 284881 285270 D identified by glimmer; hypothetical protein 284881..285270 Campylobacter concisus 13826 5596029 YP_001466199.1 CDS CCC13826_0743 NC_009802.1 285323 286462 R identified by match to protein family HMM PF03486; match to protein family HMM PF07992; pyridine nucleotide-disulphide oxidoreductase complement(285323..286462) Campylobacter concisus 13826 5596095 YP_001466200.1 CDS CCC13826_0744 NC_009802.1 286459 287760 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator transporter complement(286459..287760) Campylobacter concisus 13826 5595787 YP_001466201.1 CDS CCC13826_0746 NC_009802.1 287873 288514 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 287873..288514 Campylobacter concisus 13826 5596753 YP_001466202.1 CDS CCC13826_0745 NC_009802.1 288507 289229 R identified by match to protein family HMM PF00515; hypothetical protein complement(288507..289229) Campylobacter concisus 13826 5595586 YP_001466203.1 CDS lys1 NC_009802.1 289323 290534 D identified by match to protein family HMM PF03435; saccharopine dehydrogenase 289323..290534 Campylobacter concisus 13826 5597065 YP_001466204.1 CDS CCC13826_0751 NC_009802.1 292519 294051 D identified by match to protein family HMM PF02646; RmuC domain-containing protein 292519..294051 Campylobacter concisus 13826 5596462 YP_001466205.1 CDS CCC13826_0752 NC_009802.1 294105 294698 R permease complement(294105..294698) Campylobacter concisus 13826 5595916 YP_001466206.1 CDS CCC13826_0753 NC_009802.1 294836 295549 R hypothetical protein complement(294836..295549) Campylobacter concisus 13826 5597648 YP_001466207.1 CDS CCC13826_0754 NC_009802.1 295542 297215 R iron-sulfur cluster-binding domain-containing protein complement(295542..297215) Campylobacter concisus 13826 5595669 YP_001466208.1 CDS selA NC_009802.1 297370 298695 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 297370..298695 Campylobacter concisus 13826 5597292 YP_001466209.1 CDS selB NC_009802.1 298692 300512 D identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475; selenocysteine-specific translation elongation factor 298692..300512 Campylobacter concisus 13826 5595912 YP_001466210.1 CDS CCC13826_0757 NC_009802.1 300490 300606 D identified by glimmer; hypothetical protein 300490..300606 Campylobacter concisus 13826 5596175 YP_001466211.1 CDS tpx NC_009802.1 300566 301273 D thiol peroxidase 300566..301273 Campylobacter concisus 13826 5597209 YP_001466212.1 CDS CCC13826_0759 NC_009802.1 301554 301760 D identified by match to protein family HMM TIGR01409; hypothetical protein 301554..301760 Campylobacter concisus 13826 5596513 YP_001466213.1 CDS CCC13826_0761 NC_009802.1 302354 304747 D identified by match to protein family HMM PF00384; match to protein family HMM PF01568; hypothetical protein 302354..304747 Campylobacter concisus 13826 5595973 YP_001466214.1 CDS CCC13826_0762 NC_009802.1 304758 305318 D identified by match to protein family HMM PF00037; formate dehydrogenase iron-sulfur subunit 304758..305318 Campylobacter concisus 13826 5597500 YP_001466215.1 CDS sodB NC_009802.1 305634 307577 D identified by match to protein family HMM PF03239; superoxide dismutase 305634..307577 Campylobacter concisus 13826 5596154 YP_001466216.1 CDS CCC13826_0764 NC_009802.1 307598 308119 D C4-dicarboxylate-binding periplasmic protein 307598..308119 Campylobacter concisus 13826 5597608 YP_001466217.1 CDS CCC13826_0765 NC_009802.1 308171 309550 D identified by match to protein family HMM PF04945; hypothetical protein 308171..309550 Campylobacter concisus 13826 5597552 YP_001466218.1 CDS CCC13826_0766 NC_009802.1 309547 310839 D identified by match to protein family HMM PF02687; ABC transport permease 309547..310839 Campylobacter concisus 13826 5597443 YP_001466219.1 CDS CCC13826_0767 NC_009802.1 310826 311968 D identified by match to protein family HMM PF02687; integral membrane protein-permease, involved in lipoprotein release 310826..311968 Campylobacter concisus 13826 5596953 YP_001466220.1 CDS CCC13826_0768 NC_009802.1 311970 312659 D identified by match to protein family HMM PF00005; response regulatory protein 311970..312659 Campylobacter concisus 13826 5596693 YP_001466221.1 CDS CCC13826_0769 NC_009802.1 312649 313143 D identified by match to protein family HMM PF08534; thioredoxin 312649..313143 Campylobacter concisus 13826 5595588 YP_001466222.1 CDS CCC13826_0770 NC_009802.1 313153 313734 D hypothetical protein 313153..313734 Campylobacter concisus 13826 5595722 YP_001466223.1 CDS cynT NC_009802.1 313766 315016 D carbonic anyhydrase 313766..315016 Campylobacter concisus 13826 5595855 YP_001466224.1 CDS CCC13826_0772 NC_009802.1 315072 317438 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; integral membrane protein complement(315072..317438) Campylobacter concisus 13826 5597445 YP_001466225.1 CDS serS NC_009802.1 317438 318682 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(317438..318682) Campylobacter concisus 13826 5596259 YP_001466226.1 CDS secG NC_009802.1 318704 319144 R identified by match to protein family HMM PF04323; protein translocation protein, low temperature complement(318704..319144) Campylobacter concisus 13826 5596170 YP_001466227.1 CDS trpS NC_009802.1 319153 320118 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(319153..320118) Campylobacter concisus 13826 5597628 YP_001466228.1 CDS aroK NC_009802.1 320826 321347 R identified by match to protein family HMM PF01202; shikimate kinase complement(320826..321347) Campylobacter concisus 13826 5597518 YP_001466229.1 CDS engA NC_009802.1 321328 322716 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(321328..322716) Campylobacter concisus 13826 5596322 YP_001466230.1 CDS CCC13826_0778 NC_009802.1 322869 323759 D identified by glimmer; hypothetical protein 322869..323759 Campylobacter concisus 13826 5597159 YP_001466231.1 CDS kdsA NC_009802.1 323770 324570 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 323770..324570 Campylobacter concisus 13826 5596774 YP_001466232.1 CDS CCC13826_0780 NC_009802.1 324656 325105 D hypothetical protein 324656..325105 Campylobacter concisus 13826 5596307 YP_001466233.1 CDS CCC13826_0782 NC_009802.1 325436 325759 D identified by match to protein family HMM PF00893; methionyl-tRNA formyltransferase 325436..325759 Campylobacter concisus 13826 5596460 YP_001466234.1 CDS ribH NC_009802.1 325806 326276 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; subunit beta of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 325806..326276 Campylobacter concisus 13826 5597110 YP_001466235.1 CDS nusB NC_009802.1 326278 326673 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 326278..326673 Campylobacter concisus 13826 5597619 YP_001466236.1 CDS rplW NC_009802.1 328022 328468 D 50S ribosomal protein L23 328022..328468 Campylobacter concisus 13826 5596699 YP_001466237.1 CDS CCC13826_0790 NC_009802.1 330220 330423 R chain A, Nikr in Open conformation and nickel bound to high-affinity Sites complement(330220..330423) Campylobacter concisus 13826 5596964 YP_001466238.1 CDS soj NC_009802.1 332780 333805 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; SpoOJ regulator complement(332780..333805) Campylobacter concisus 13826 5596887 YP_001466239.1 CDS dnaG NC_009802.1 333861 335579 D synthesizes RNA primers at the replication forks; DNA primase 333861..335579 Campylobacter concisus 13826 5597448 YP_001466240.1 CDS CCC13826_0797 NC_009802.1 336919 338238 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; aminobenzoyl-glutamate utilization protein A 336919..338238 Campylobacter concisus 13826 5597654 YP_001466241.1 CDS CCC13826_0798 NC_009802.1 338235 338933 D alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 338235..338933 Campylobacter concisus 13826 5596626 YP_001466242.1 CDS pepT NC_009802.1 340268 341491 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 340268..341491 Campylobacter concisus 13826 5597030 YP_001466243.1 CDS ylxH NC_009802.1 341566 342540 D ATP-binding protein 341566..342540 Campylobacter concisus 13826 5595843 YP_001466244.1 CDS CCC13826_0802 NC_009802.1 342644 342766 D periplasmic binding protein 342644..342766 Campylobacter concisus 13826 5597479 YP_001466245.1 CDS CCC13826_0803 NC_009802.1 343165 343929 D 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; hppk; 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; pppk; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 343165..343929 Campylobacter concisus 13826 5596461 YP_001466246.1 CDS pepQ NC_009802.1 344716 346671 D prolidase (Xaa-Pro dipeptidase; PepQ) 344716..346671 Campylobacter concisus 13826 5597707 YP_001466247.1 CDS CCC13826_0805 NC_009802.1 346809 348008 D 3-dehydroquinate dehydratase (3-dehydroquinase; type iidhqase) 346809..348008 Campylobacter concisus 13826 5597434 YP_001466248.1 CDS CCC13826_0806 NC_009802.1 348427 348693 D identified by match to protein family HMM PF05973; prophage protein gp49 348427..348693 Campylobacter concisus 13826 5597373 YP_001466249.1 CDS CCC13826_0807 NC_009802.1 348690 348974 D identified by match to protein family HMM PF01381; hypothetical protein 348690..348974 Campylobacter concisus 13826 5597644 YP_001466250.1 CDS CCC13826_0165 NC_009802.1 349168 351186 R identified by match to protein family HMM PF00004; ATPase AAA, central region complement(349168..351186) Campylobacter concisus 13826 5596939 YP_001466251.1 CDS CCC13826_0810 NC_009802.1 351318 352598 R identified by glimmer; hypothetical protein complement(351318..352598) Campylobacter concisus 13826 5596923 YP_001466252.1 CDS CCC13826_0811 NC_009802.1 352641 353537 R identified by glimmer; hypothetical protein complement(352641..353537) Campylobacter concisus 13826 5597318 YP_001466253.1 CDS CCC13826_0812 NC_009802.1 353622 354206 R hypothetical protein complement(353622..354206) Campylobacter concisus 13826 5596520 YP_001466254.1 CDS panB NC_009802.1 354267 355601 R Ketopantoate hydroxymethyltransferase complement(354267..355601) Campylobacter concisus 13826 5597476 YP_001466255.1 CDS CCC13826_0814 NC_009802.1 355612 356868 R identified by glimmer; hypothetical protein complement(355612..356868) Campylobacter concisus 13826 5596185 YP_001466256.1 CDS CCC13826_0815 NC_009802.1 356883 357470 R hypothetical protein complement(356883..357470) Campylobacter concisus 13826 5596112 YP_001466257.1 CDS amaA NC_009802.1 357605 358399 D identified by match to protein family HMM PF04371; acid membrane antigen A 357605..358399 Campylobacter concisus 13826 5596407 YP_001466258.1 CDS CCC13826_0817 NC_009802.1 358417 359172 R identified by glimmer; hypothetical protein complement(358417..359172) Campylobacter concisus 13826 5596653 YP_001466259.1 CDS CCC13826_0818 NC_009802.1 359324 359566 D hypothetical protein 359324..359566 Campylobacter concisus 13826 5596193 YP_001466260.1 CDS CCC13826_0819 NC_009802.1 359563 360729 D identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII; M.HaeIII) 359563..360729 Campylobacter concisus 13826 5597606 YP_001466261.1 CDS CCC13826_0820 NC_009802.1 360739 362208 D identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; two-component sensor 360739..362208 Campylobacter concisus 13826 5597616 YP_001466262.1 CDS CCC13826_0821 NC_009802.1 362264 362890 D two component transcriptional regulator 362264..362890 Campylobacter concisus 13826 5596473 YP_001466263.1 CDS CCC13826_0822 NC_009802.1 362887 364125 D identified by match to protein family HMM PF07728; polysulfide reductase chain C (sulfur reductase chain C) 362887..364125 Campylobacter concisus 13826 5596594 YP_001466264.1 CDS CCC13826_0824 NC_009802.1 364199 365386 D hypothetical protein 364199..365386 Campylobacter concisus 13826 5595863 YP_001466265.1 CDS CCC13826_0823 NC_009802.1 365367 365972 R identified by match to protein family HMM PF03235; hypothetical protein complement(365367..365972) Campylobacter concisus 13826 5596130 YP_001466266.1 CDS CCC13826_0825 NC_009802.1 366244 367062 D identified by match to protein family HMM PF02146; anaerobic C4-dicarboxylate transporter DcuA 366244..367062 Campylobacter concisus 13826 5596843 YP_001466267.1 CDS aspA NC_009802.1 367116 368033 D identified by match to protein family HMM PF08279; aspartate ammonia-lyase 367116..368033 Campylobacter concisus 13826 5596026 YP_001466268.1 CDS CCC13826_0827 NC_009802.1 368048 368296 D protein TonB 368048..368296 Campylobacter concisus 13826 5596757 YP_001466269.1 CDS CCC13826_0828 NC_009802.1 368468 369175 R biopolymer transport ExbD protein complement(368468..369175) Campylobacter concisus 13826 5596168 YP_001466270.1 CDS CCC13826_0945 NC_009802.1 369944 370246 D identified by glimmer; hypothetical protein 369944..370246 Campylobacter concisus 13826 5596503 YP_001466271.1 CDS CCC13826_0946 NC_009802.1 370299 370769 D identified by glimmer; hypothetical protein 370299..370769 Campylobacter concisus 13826 5595921 YP_001466272.1 CDS atoS NC_009802.1 370922 371284 D identified by match to protein family HMM PF01402; signal-transducing protein, histidine kinase 370922..371284 Campylobacter concisus 13826 5596105 YP_001466273.1 CDS CCC13826_0949 NC_009802.1 371274 373724 D aminotransferase 371274..373724 Campylobacter concisus 13826 5596275 YP_001466274.1 CDS CCC13826_0948 NC_009802.1 373698 374027 R ATPase complement(373698..374027) Campylobacter concisus 13826 5597060 YP_001466275.1 CDS thiD NC_009802.1 374099 375454 R phosphomethylpyrimidine kinase complement(374099..375454) Campylobacter concisus 13826 5596599 YP_001466276.1 CDS CCC13826_0951 NC_009802.1 375752 377524 D identified by match to protein family HMM PF07728; TMPpyrophosphorylase; TMP-PPase; thiamine-phosphate synthase; thiamine-phosphate pyrophosphorylase 375752..377524 Campylobacter concisus 13826 5595672 YP_001466277.1 CDS CCC13826_0952 NC_009802.1 377505 378830 D identified by glimmer; hypothetical protein 377505..378830 Campylobacter concisus 13826 5597376 YP_001466278.1 CDS CCC13826_0953 NC_009802.1 379223 380851 D identified by glimmer; hypothetical protein 379223..380851 Campylobacter concisus 13826 5595746 YP_001466279.1 CDS CCC13826_0954 NC_009802.1 380993 381562 D GTP-binding protein 380993..381562 Campylobacter concisus 13826 5596058 YP_001466280.1 CDS CCC13826_0955 NC_009802.1 382323 382457 D ATP 382323..382457 Campylobacter concisus 13826 5596254 YP_001466281.1 CDS CCC13826_0957 NC_009802.1 382675 383733 R metal-activated pyridoxal enzyme complement(382675..383733) Campylobacter concisus 13826 5596327 YP_001466282.1 CDS CCC13826_0958 NC_009802.1 383867 385069 D trimethylamine-n-oxide reductase 1 (tmaoreductase 1; trimethylamine oxidase 1) 383867..385069 Campylobacter concisus 13826 5597294 YP_001466283.1 CDS CCC13826_0959 NC_009802.1 385111 388350 R hypothetical protein complement(385111..388350) Campylobacter concisus 13826 5595961 YP_001466284.1 CDS CCC13826_0961 NC_009802.1 389094 389237 R identified by glimmer; hypothetical protein complement(389094..389237) Campylobacter concisus 13826 5596086 YP_001466285.1 CDS CCC13826_0962 NC_009802.1 389238 389903 R identified by glimmer; hypothetical protein complement(389238..389903) Campylobacter concisus 13826 5596732 YP_001466286.1 CDS CCC13826_0963 NC_009802.1 390018 391079 R identified by match to protein family HMM PF03480; CjaC complement(390018..391079) Campylobacter concisus 13826 5596762 YP_001466287.1 CDS pyk NC_009802.1 391172 392623 D identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 391172..392623 Campylobacter concisus 13826 5597358 YP_001466288.1 CDS dnaJ NC_009802.1 393506 394648 R identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ complement(393506..394648) Campylobacter concisus 13826 5595920 YP_001466289.1 CDS CCC13826_2226 NC_009802.1 394657 394779 D identified by glimmer; hypothetical protein 394657..394779 Campylobacter concisus 13826 5595938 YP_001466290.1 CDS CCC13826_0966 NC_009802.1 394772 395443 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; His/Glu/Gln/Arg/opine amino acid ABC transporter permease 394772..395443 Campylobacter concisus 13826 5596828 YP_001466291.1 CDS putP NC_009802.1 395440 396696 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; proline permease 395440..396696 Campylobacter concisus 13826 5596220 YP_001466292.1 CDS recR NC_009802.1 396693 397265 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 396693..397265 Campylobacter concisus 13826 5596104 YP_001466293.1 CDS CCC13826_0969 NC_009802.1 397349 398965 D identified by match to protein family HMM PF00117; match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM TIGR00566; match to protein family HMM TIGR01245; anthranilate synthase/para-aminobenzoate synthase glutamine amidotransferase subunit 397349..398965 Campylobacter concisus 13826 5596282 YP_001466294.1 CDS trpF NC_009802.1 398952 399566 D identified by match to protein family HMM PF00697; N-(5'phosphoribosyl)anthranilate isomerase 398952..399566 Campylobacter concisus 13826 5595596 YP_001466295.1 CDS trpB NC_009802.1 399556 400737 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 399556..400737 Campylobacter concisus 13826 5595609 YP_001466296.1 CDS trpA NC_009802.1 400730 401479 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 400730..401479 Campylobacter concisus 13826 5596458 YP_001466297.1 CDS CCC13826_0974 NC_009802.1 401557 401976 D Mrr restriction system protein (EcoKMrr) 401557..401976 Campylobacter concisus 13826 5596926 YP_001466298.1 CDS fliN NC_009802.1 401973 402290 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 401973..402290 Campylobacter concisus 13826 5595628 YP_001466299.1 CDS CCC13826_0976 NC_009802.1 402287 403165 D hypothetical protein 402287..403165 Campylobacter concisus 13826 5596441 YP_001466300.1 CDS CCC13826_0977 NC_009802.1 403185 403328 R fumarate reductase flavoprotein subunit complement(403185..403328) Campylobacter concisus 13826 5596634 YP_001466301.1 CDS frdC NC_009802.1 404145 405593 R identified by match to protein family HMM PF02541; fumarate reductase complement(404145..405593) Campylobacter concisus 13826 5596718 YP_001466302.1 CDS CCC13826_0979 NC_009802.1 405597 406817 R prolipoprotein diacylglyceryl transferase complement(405597..406817) Campylobacter concisus 13826 5597022 YP_001466303.1 CDS CCC13826_0980 NC_009802.1 406853 407524 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein complement(406853..407524) Campylobacter concisus 13826 5596413 YP_001466304.1 CDS folB NC_009802.1 407601 407927 R identified by match to protein family HMM PF02152; dihydroneopterin aldolase complement(407601..407927) Campylobacter concisus 13826 5596922 YP_001466305.1 CDS CCC13826_0982 NC_009802.1 407924 408535 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY complement(407924..408535) Campylobacter concisus 13826 5597113 YP_001466306.1 CDS CCC13826_0983 NC_009802.1 408595 410883 R hypothetical protein complement(408595..410883) Campylobacter concisus 13826 5596587 YP_001466307.1 CDS CCC13826_0984 NC_009802.1 410892 411974 R identified by match to protein family HMM PF07238; type IV pilus assembly protein PilZ complement(410892..411974) Campylobacter concisus 13826 5596451 YP_001466308.1 CDS CCC13826_0985 NC_009802.1 412097 412696 R identified by match to protein family HMM PF00578; match to protein family HMM PF08534; Fragment; 2-cys peroxiredoxin BAS1, (thiol-specific antioxidant protein) complement(412097..412696) Campylobacter concisus 13826 5595640 YP_001466309.1 CDS CCC13826_0986 NC_009802.1 412894 413898 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III complement(412894..413898) Campylobacter concisus 13826 5595923 YP_001466310.1 CDS plsX NC_009802.1 413902 414891 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(413902..414891) Campylobacter concisus 13826 5596538 YP_001466311.1 CDS rpmF NC_009802.1 414895 415041 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(414895..415041) Campylobacter concisus 13826 5596813 YP_001466312.1 CDS CCC13826_0989 NC_009802.1 415053 415412 R identified by glimmer; hypothetical protein complement(415053..415412) Campylobacter concisus 13826 5595817 YP_001466313.1 CDS ndk NC_009802.1 415427 415840 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(415427..415840) Campylobacter concisus 13826 5596892 YP_001466314.1 CDS CCC13826_0991 NC_009802.1 415943 416227 R identified by match to protein family HMM PF00037; CDP-diacylglycerol--serine O-phosphatidyltransferase (phosphatidylserine synthase) complement(415943..416227) Campylobacter concisus 13826 5597323 YP_001466315.1 CDS uvrA NC_009802.1 416401 419229 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 416401..419229 Campylobacter concisus 13826 5597588 YP_001466316.1 CDS CCC13826_0993 NC_009802.1 419275 420357 D identified by match to protein family HMM PF00534; cell division protease FtsH-like protein 419275..420357 Campylobacter concisus 13826 5595945 YP_001466317.1 CDS CCC13826_0994 NC_009802.1 420354 421628 D ribosomal protein L11 methyltransferase (L11 Mtase) 420354..421628 Campylobacter concisus 13826 5596534 YP_001466318.1 CDS CCC13826_0995 NC_009802.1 421632 422738 D identified by match to protein family HMM PF00534; chemotaxis protein CheY 421632..422738 Campylobacter concisus 13826 5597578 YP_001466319.1 CDS rpmA NC_009802.1 422784 423041 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(422784..423041) Campylobacter concisus 13826 5596593 YP_001466320.1 CDS rplU NC_009802.1 423053 423367 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(423053..423367) Campylobacter concisus 13826 5595720 YP_001466321.1 CDS CCC13826_0998 NC_009802.1 423475 424437 R identified by glimmer; hypothetical protein complement(423475..424437) Campylobacter concisus 13826 5596189 YP_001466322.1 CDS flhB NC_009802.1 424581 425654 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 424581..425654 Campylobacter concisus 13826 5596724 YP_001466323.1 CDS yvfE NC_009802.1 425745 427424 R apparently involved in regulation of cell wall biosynthesis; pyridoxal phosphate-dependent enzyme complement(425745..427424) Campylobacter concisus 13826 5597369 YP_001466324.1 CDS CCC13826_1001 NC_009802.1 427630 428880 D general glycosylation pathway protein 427630..428880 Campylobacter concisus 13826 5596854 YP_001466325.1 CDS CCC13826_1002 NC_009802.1 428883 430073 D identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; hypothetical protein 428883..430073 Campylobacter concisus 13826 5596421 YP_001466326.1 CDS CCC13826_1003 NC_009802.1 430045 430818 D identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268; hypothetical protein 430045..430818 Campylobacter concisus 13826 5596032 YP_001466327.1 CDS CCC13826_1004 NC_009802.1 430815 431561 D ncair mutase 430815..431561 Campylobacter concisus 13826 5596131 YP_001466328.1 CDS CCC13826_1005 NC_009802.1 431666 432916 D identified by match to protein family HMM PF00023; hypothetical protein 431666..432916 Campylobacter concisus 13826 5596374 YP_001466329.1 CDS CCC13826_1006 NC_009802.1 432928 433827 D Involved in the tartrate degradation pathway; tartrate dehydratase subunit alpha 432928..433827 Campylobacter concisus 13826 5597297 YP_001466330.1 CDS CCC13826_1007 NC_009802.1 433824 434435 D Involved in the tartrate degradation pathway; L(+)-tartrate dehydratase subunit beta 433824..434435 Campylobacter concisus 13826 5595645 YP_001466331.1 CDS wlaD NC_009802.1 434486 435145 R identified by match to protein family HMM PF00392; glycosyltransferase complement(434486..435145) Campylobacter concisus 13826 5595888 YP_001466332.1 CDS ansB NC_009802.1 435218 436195 R identified by match to protein family HMM PF00710; L-asparaginase II complement(435218..436195) Campylobacter concisus 13826 5596893 YP_001466333.1 CDS CCC13826_1010 NC_009802.1 436368 437606 D identified by match to protein family HMM PF06808; hypothetical protein 436368..437606 Campylobacter concisus 13826 5596106 YP_001466334.1 CDS tviB NC_009802.1 441550 441885 D UDP-glucose/GDP-mannose dehydrogenase family protein 441550..441885 Campylobacter concisus 13826 5597477 YP_001466335.1 CDS fmt NC_009802.1 441902 442807 D identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 441902..442807 Campylobacter concisus 13826 5596745 YP_001466336.1 CDS thiD NC_009802.1 442824 443612 D identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 442824..443612 Campylobacter concisus 13826 5597613 YP_001466337.1 CDS CCC13826_0360 NC_009802.1 443614 444249 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 443614..444249 Campylobacter concisus 13826 5597411 YP_001466338.1 CDS CCC13826_0359 NC_009802.1 444246 445028 D identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein soj 444246..445028 Campylobacter concisus 13826 5597560 YP_001466339.1 CDS CCC13826_0358 NC_009802.1 445044 445904 D identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; stage 0 sporulation protein J 445044..445904 Campylobacter concisus 13826 5597227 YP_001466340.1 CDS CCC13826_0912 NC_009802.1 446000 446422 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 446000..446422 Campylobacter concisus 13826 5597599 YP_001466341.1 CDS CCC13826_0913 NC_009802.1 446432 446944 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 446432..446944 Campylobacter concisus 13826 5597630 YP_001466342.1 CDS atpH NC_009802.1 446944 447474 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The subunit delta is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 446944..447474 Campylobacter concisus 13826 5597147 YP_001466343.1 CDS atpA NC_009802.1 447489 449006 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 447489..449006 Campylobacter concisus 13826 5597351 YP_001466344.1 CDS atpG NC_009802.1 449016 449903 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 449016..449903 Campylobacter concisus 13826 5597130 YP_001466345.1 CDS atpD NC_009802.1 449915 451312 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 449915..451312 Campylobacter concisus 13826 5595713 YP_001466346.1 CDS atpC NC_009802.1 451331 451720 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 451331..451720 Campylobacter concisus 13826 5597532 YP_001466347.1 CDS CCC13826_0919 NC_009802.1 451838 452305 D identified by match to protein family HMM PF01618; ExbB\TolQ family transporter 451838..452305 Campylobacter concisus 13826 5597313 YP_001466348.1 CDS CCC13826_0920 NC_009802.1 452306 452704 D identified by match to protein family HMM PF02472; polysaccharide deacetylase 452306..452704 Campylobacter concisus 13826 5596833 YP_001466349.1 CDS CCC13826_0921 NC_009802.1 452706 453653 D periplasmic protein 452706..453653 Campylobacter concisus 13826 5597133 YP_001466350.1 CDS tolB NC_009802.1 453678 454934 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 453678..454934 Campylobacter concisus 13826 5596310 YP_001466351.1 CDS CCC13826_0923 NC_009802.1 454999 455505 D identified by match to protein family HMM PF00691; Omp18 454999..455505 Campylobacter concisus 13826 5597589 YP_001466352.1 CDS rfaF NC_009802.1 455519 456361 D ADP-heptose-LPS heptosyltransferase II 455519..456361 Campylobacter concisus 13826 5597672 YP_001466353.1 CDS CCC13826_0925 NC_009802.1 456423 457001 D identified by match to protein family HMM PF00254; peptidyl-prolyl cis-trans isomerase, fkbp-type 456423..457001 Campylobacter concisus 13826 5596352 YP_001466354.1 CDS fabD NC_009802.1 457011 457940 D identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 457011..457940 Campylobacter concisus 13826 5595991 YP_001466355.1 CDS mtnN NC_009802.1 457937 458620 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 457937..458620 Campylobacter concisus 13826 5596697 YP_001466356.1 CDS CCC13826_0928 NC_009802.1 458617 459375 D identified by match to protein family HMM PF01171; match to protein family HMM PF06508; PP-loop family protein 458617..459375 Campylobacter concisus 13826 5597404 YP_001466357.1 CDS CCC13826_0929 NC_009802.1 459511 460614 D glutamyl-tRNA synthetase 459511..460614 Campylobacter concisus 13826 5595580 YP_001466358.1 CDS CCC13826_0930 NC_009802.1 460684 461397 D DNA polymerase III subunit alpha 460684..461397 Campylobacter concisus 13826 5596152 YP_001466359.1 CDS CCC13826_0931 NC_009802.1 461470 461865 D identified by glimmer; hypothetical protein 461470..461865 Campylobacter concisus 13826 5596155 YP_001466360.1 CDS CCC13826_0932 NC_009802.1 461878 462690 D surface protein 461878..462690 Campylobacter concisus 13826 5597547 YP_001466361.1 CDS pnp NC_009802.1 462772 463608 R polyribonucleotide nucleotidyltransferase complement(462772..463608) Campylobacter concisus 13826 5595677 YP_001466362.1 CDS CCC13826_0934 NC_009802.1 463660 463785 D identified by glimmer; hypothetical protein 463660..463785 Campylobacter concisus 13826 5596432 YP_001466363.1 CDS CCC13826_0936 NC_009802.1 463809 464957 D hypothetical protein 463809..464957 Campylobacter concisus 13826 5596191 YP_001466364.1 CDS CCC13826_0935 NC_009802.1 464954 465568 R recombination protein RecO complement(464954..465568) Campylobacter concisus 13826 5595798 YP_001466365.1 CDS CCC13826_0937 NC_009802.1 465569 466492 R identified by match to protein family HMM PF01207; gars; glycinamideribonucleotide synthetase; phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase complement(465569..466492) Campylobacter concisus 13826 5597064 YP_001466366.1 CDS CCC13826_0938 NC_009802.1 466489 467487 R uroporphyrinogen III synthase HEM4 complement(466489..467487) Campylobacter concisus 13826 5596614 YP_001466367.1 CDS CCC13826_0939 NC_009802.1 467497 467853 R identified by match to protein family HMM PF01258; TraR/DksA family transcriptional regulator complement(467497..467853) Campylobacter concisus 13826 5596206 YP_001466368.1 CDS CCC13826_0940 NC_009802.1 467865 468320 R identified by match to protein family HMM PF02590; hypothetical protein complement(467865..468320) Campylobacter concisus 13826 5596116 YP_001466369.1 CDS accD NC_009802.1 468323 469141 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(468323..469141) Campylobacter concisus 13826 5597349 YP_001466370.1 CDS yaeT NC_009802.1 469370 471625 R identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM TIGR03303; outer membrane protein assembly complex, YaeT protein complement(469370..471625) Campylobacter concisus 13826 5596438 YP_001466371.1 CDS CCC13826_0943 NC_009802.1 471715 472545 D catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 471715..472545 Campylobacter concisus 13826 5596637 YP_001466372.1 CDS tyrS NC_009802.1 472607 473977 D identified by match to protein family HMM PF01551; tyrosyl-tRNA synthetase 472607..473977 Campylobacter concisus 13826 5596263 YP_001466373.1 CDS lpxC NC_009802.1 474038 474922 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 474038..474922 Campylobacter concisus 13826 5597636 YP_001466374.1 CDS CCC13826_1492 NC_009802.1 474964 475365 D identified by match to protein family HMM PF00814; glycoprotease family protein 474964..475365 Campylobacter concisus 13826 5597686 YP_001466375.1 CDS thrB NC_009802.1 475374 476258 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 475374..476258 Campylobacter concisus 13826 5596839 YP_001466376.1 CDS CCC13826_1494 NC_009802.1 476280 476534 D hypothetical protein 476280..476534 Campylobacter concisus 13826 5596866 YP_001466377.1 CDS infB NC_009802.1 476521 479178 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 476521..479178 Campylobacter concisus 13826 5597328 YP_001466378.1 CDS rbfA NC_009802.1 479175 479540 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 479175..479540 Campylobacter concisus 13826 5596186 YP_001466379.1 CDS CCC13826_1497 NC_009802.1 479533 479949 D identified by match to protein family HMM PF02576; hypothetical protein 479533..479949 Campylobacter concisus 13826 5596082 YP_001466380.1 CDS ribD NC_009802.1 481652 482713 D identified by match to protein family HMM PF00383; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 481652..482713 Campylobacter concisus 13826 5596335 YP_001466381.1 CDS CCC13826_1502 NC_009802.1 483769 484071 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(483769..484071) Campylobacter concisus 13826 5596601 YP_001466382.1 CDS ftsW_ NC_009802.1 484278 485624 D identified by match to protein family HMM PF00209; cell division membrane protein FtsW/MrdB/SpoVE 484278..485624 Campylobacter concisus 13826 5597320 YP_001466383.1 CDS CCC13826_1504 NC_009802.1 485624 486955 D identified by match to protein family HMM PF00209; sodium/neurotransmitter symporter family protein 485624..486955 Campylobacter concisus 13826 5596117 YP_001466384.1 CDS CCC13826_1505 NC_009802.1 486955 488307 D identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein 486955..488307 Campylobacter concisus 13826 5595716 YP_001466385.1 CDS CCC13826_1506 NC_009802.1 488300 488809 D identified by match to protein family HMM PF04290; triosephosphate isomerase (TIM; triose-phosphateisomerase) 488300..488809 Campylobacter concisus 13826 5597573 YP_001466386.1 CDS CCC13826_1507 NC_009802.1 488809 490197 D identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786; trap dicarboxylate transporter dctm subunit 488809..490197 Campylobacter concisus 13826 5597555 YP_001466387.1 CDS CCC13826_1508 NC_009802.1 490319 492121 D identified by match to protein family HMM PF00364; match to protein family HMM PF00682; GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2 490319..492121 Campylobacter concisus 13826 5595724 YP_001466388.1 CDS pckA NC_009802.1 492224 493801 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 492224..493801 Campylobacter concisus 13826 5597503 YP_001466389.1 CDS CCC13826_1510 NC_009802.1 493946 494095 R hypothetical protein complement(493946..494095) Campylobacter concisus 13826 5596915 YP_001466390.1 CDS CCC13826_1511 NC_009802.1 494295 494987 R identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035; aspartate racemase complement(494295..494987) Campylobacter concisus 13826 5595600 YP_001466391.1 CDS CCC13826_1512 NC_009802.1 495152 496507 R identified by match to protein family HMM PF00375; glycosyl transferase group 1 complement(495152..496507) Campylobacter concisus 13826 5596876 YP_001466392.1 CDS CCC13826_1513 NC_009802.1 496519 497013 R identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase B (PPIase B; rotamase B) complement(496519..497013) Campylobacter concisus 13826 5597188 YP_001466393.1 CDS CCC13826_1514 NC_009802.1 497025 497732 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(497025..497732) Campylobacter concisus 13826 5595594 YP_001466394.1 CDS CCC13826_1515 NC_009802.1 497884 498438 D identified by match to protein family HMM PF00583; acetyltransferase 497884..498438 Campylobacter concisus 13826 5595929 YP_001466395.1 CDS CCC13826_1516 NC_009802.1 498435 498638 D asparagine synthase, glutamine-hydrolyzing 498435..498638 Campylobacter concisus 13826 5595619 YP_001466396.1 CDS CCC13826_1518 NC_009802.1 500820 501359 D identified by glimmer; hypothetical protein 500820..501359 Campylobacter concisus 13826 5596929 YP_001466397.1 CDS CCC13826_1519 NC_009802.1 501362 501751 R identified by glimmer; hypothetical protein complement(501362..501751) Campylobacter concisus 13826 5596807 YP_001466398.1 CDS argH NC_009802.1 502022 503422 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 502022..503422 Campylobacter concisus 13826 5596779 YP_001466399.1 CDS CCC13826_1521 NC_009802.1 503469 504551 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 503469..504551 Campylobacter concisus 13826 5597494 YP_001466400.1 CDS CCC13826_1522 NC_009802.1 504592 505788 R identified by match to protein family HMM PF04332; match to protein family HMM PF07690; methionyl-tRNA formyltransferase complement(504592..505788) Campylobacter concisus 13826 5597309 YP_001466401.1 CDS CCC13826_1523 NC_009802.1 505790 506995 R identified by glimmer; hypothetical protein complement(505790..506995) Campylobacter concisus 13826 5596343 YP_001466402.1 CDS CCC13826_1524 NC_009802.1 507044 507472 R hypothetical protein complement(507044..507472) Campylobacter concisus 13826 5597073 YP_001466403.1 CDS CCC13826_1525 NC_009802.1 507553 508467 D identified by match to protein family HMM PF01145; hypothetical protein 507553..508467 Campylobacter concisus 13826 5595755 YP_001466404.1 CDS CCC13826_1526 NC_009802.1 508464 508856 D identified by match to protein family HMM PF01957; nodulation efficiency protein D (NfeD) 508464..508856 Campylobacter concisus 13826 5596875 YP_001466405.1 CDS CCC13826_1527 NC_009802.1 508877 509089 R identified by glimmer; hypothetical protein complement(508877..509089) Campylobacter concisus 13826 5595721 YP_001466406.1 CDS CCC13826_1528 NC_009802.1 509177 510268 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; hypothetical protein 509177..510268 Campylobacter concisus 13826 5595971 YP_001466407.1 CDS CCC13826_1529 NC_009802.1 510269 511498 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; processing protease 510269..511498 Campylobacter concisus 13826 5596969 YP_001466408.1 CDS CCC13826_1530 NC_009802.1 511488 513308 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 511488..513308 Campylobacter concisus 13826 5595965 YP_001466409.1 CDS CCC13826_1531 NC_009802.1 513666 513989 R Cpp29 complement(513666..513989) Campylobacter concisus 13826 5597348 YP_001466410.1 CDS CCC13826_1532 NC_009802.1 514100 514873 R identified by match to protein family HMM PF00005; iron compounds ABC transporter ATP-binding protein complement(514100..514873) Campylobacter concisus 13826 5595666 YP_001466411.1 CDS CCC13826_1533 NC_009802.1 514873 515880 R identified by match to protein family HMM PF01032; hexapaptide repeat-containing transferase complement(514873..515880) Campylobacter concisus 13826 5597402 YP_001466412.1 CDS wbpB NC_009802.1 515884 516939 R identified by match to protein family HMM PF01497; lipopolysaccharide biosynthesis protein complement(515884..516939) Campylobacter concisus 13826 5595946 YP_001466413.1 CDS CCC13826_1535 NC_009802.1 517159 519390 D arginyl-tRNA synthetase (arginine--tRNA ligase; ArgRS) 517159..519390 Campylobacter concisus 13826 5597338 YP_001466414.1 CDS CCC13826_1536 NC_009802.1 519462 520016 D identified by match to protein family HMM PF07509; twin-arginine translocation protein TatA/E 519462..520016 Campylobacter concisus 13826 5596673 YP_001466415.1 CDS CCC13826_1537 NC_009802.1 520031 520468 R identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotease complement(520031..520468) Campylobacter concisus 13826 5597664 YP_001466416.1 CDS CCC13826_1538 NC_009802.1 520526 521191 D identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364; ExsB protein 520526..521191 Campylobacter concisus 13826 5595685 YP_001466417.1 CDS fliR NC_009802.1 521248 521892 R flagellar biosynthetic protein complement(521248..521892) Campylobacter concisus 13826 5597675 YP_001466418.1 CDS hcp NC_009802.1 522113 523441 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 522113..523441 Campylobacter concisus 13826 5597121 YP_004777020.1 CDS metG NC_009802.1 524453 526387 R methionyl-tRNA synthetase complement(524453..526387) Campylobacter concisus 13826 5597179 YP_001466419.1 CDS CCC13826_1543 NC_009802.1 526403 526621 R hypothetical protein complement(526403..526621) Campylobacter concisus 13826 5597095 YP_001466420.1 CDS fbp NC_009802.1 526621 527484 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(526621..527484) Campylobacter concisus 13826 5597681 YP_001466421.1 CDS mobB NC_009802.1 527484 527963 R identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176; molybdopterin-guanine dinucleotide biosynthesis protein B complement(527484..527963) Campylobacter concisus 13826 5596031 YP_001466422.1 CDS CCC13826_1546 NC_009802.1 528485 530122 R identified by match to protein family HMM PF01464; transglycosylase complement(528485..530122) Campylobacter concisus 13826 5595980 YP_001466423.1 CDS ribC NC_009802.1 530100 530393 R identified by match to protein family HMM PF02325; riboflavin synthase subunit alpha complement(530100..530393) Campylobacter concisus 13826 5596268 YP_001466424.1 CDS gltX NC_009802.1 530402 531697 R charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase complement(530402..531697) Campylobacter concisus 13826 5595785 YP_001466425.1 CDS mscL NC_009802.1 531845 532252 D forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 531845..532252 Campylobacter concisus 13826 5596578 YP_001466426.1 CDS CCC13826_1550 NC_009802.1 532351 532989 D identified by match to protein family HMM PF00027; protein YieJ 532351..532989 Campylobacter concisus 13826 5596422 YP_001466427.1 CDS CCC13826_1551 NC_009802.1 533110 533682 D identified by match to protein family HMM PF03264; acetyl-CoA carboxylase carboxyltransferase subunitalpha; ACCase subunit alpha; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 533110..533682 Campylobacter concisus 13826 5597458 YP_001466428.1 CDS fabF NC_009802.1 533692 535062 D beta ketoacyl-acyl carrier protein synthase II 533692..535062 Campylobacter concisus 13826 5596515 YP_001466429.1 CDS acpP NC_009802.1 535284 536396 D identified by match to protein family HMM PF00149; acyl carrier protein 535284..536396 Campylobacter concisus 13826 5596037 YP_001466430.1 CDS psd NC_009802.1 536398 537198 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 536398..537198 Campylobacter concisus 13826 5596049 YP_001466431.1 CDS guaA NC_009802.1 537602 539134 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(537602..539134) Campylobacter concisus 13826 5595673 YP_001466432.1 CDS CCC13826_1556 NC_009802.1 539145 540533 R identified by match to protein family HMM PF03600; hypothetical protein complement(539145..540533) Campylobacter concisus 13826 5597462 YP_001466433.1 CDS CCC13826_1557 NC_009802.1 540647 540814 R identified by glimmer; hypothetical protein complement(540647..540814) Campylobacter concisus 13826 5597025 YP_001466434.1 CDS CCC13826_1558 NC_009802.1 540845 541297 D hypothetical protein 540845..541297 Campylobacter concisus 13826 5596619 YP_001466435.1 CDS uvrC NC_009802.1 541291 543108 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 541291..543108 Campylobacter concisus 13826 5596896 YP_001466436.1 CDS CCC13826_1560 NC_009802.1 543105 543839 D identified by glimmer; hypothetical protein 543105..543839 Campylobacter concisus 13826 5596521 YP_001466437.1 CDS pheS NC_009802.1 547236 548231 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 547236..548231 Campylobacter concisus 13826 5596209 YP_001466438.1 CDS ispH NC_009802.1 551828 552652 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 551828..552652 Campylobacter concisus 13826 5596355 YP_001466439.1 CDS rpsA NC_009802.1 552733 554409 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 552733..554409 Campylobacter concisus 13826 5595678 YP_001466440.1 CDS CCC13826_1568 NC_009802.1 554415 554897 D hypothetical protein 554415..554897 Campylobacter concisus 13826 5596546 YP_001466441.1 CDS serA NC_009802.1 554894 556471 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 554894..556471 Campylobacter concisus 13826 5597677 YP_001466442.1 CDS efp NC_009802.1 556493 557059 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 556493..557059 Campylobacter concisus 13826 5597715 YP_001466443.1 CDS CCC13826_1571 NC_009802.1 557084 557692 D tRNA(Ile)-lysidinesynthetase; tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthase 557084..557692 Campylobacter concisus 13826 5597184 YP_001466444.1 CDS CCC13826_1572 NC_009802.1 557921 558169 R identified by glimmer; hypothetical protein complement(557921..558169) Campylobacter concisus 13826 5596620 YP_001466445.1 CDS CCC13826_1573 NC_009802.1 558347 558469 D identified by glimmer; hypothetical protein 558347..558469 Campylobacter concisus 13826 5596976 YP_001466446.1 CDS CCC13826_1574 NC_009802.1 558529 559179 R identified by match to protein family HMM PF00899; peptide chain release factor 2 complement(558529..559179) Campylobacter concisus 13826 5596992 YP_001466447.1 CDS surE NC_009802.1 559169 559945 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(559169..559945) Campylobacter concisus 13826 5596542 YP_001466448.1 CDS lpxB NC_009802.1 560048 561082 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; ipid-A-disaccharide synthase 560048..561082 Campylobacter concisus 13826 5595656 YP_001466449.1 CDS greA NC_009802.1 561086 561571 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 561086..561571 Campylobacter concisus 13826 5595691 YP_001466450.1 CDS CCC13826_1578 NC_009802.1 561635 562426 D identified by match to protein family HMM PF00149; pyridine nucleotide-disulfide oxidoreductase YkgC 561635..562426 Campylobacter concisus 13826 5597649 YP_001466451.1 CDS CCC13826_1579 NC_009802.1 562426 563379 D identified by match to protein family HMM PF00072; match to protein family HMM PF01584; chemotaxis protein CheV 562426..563379 Campylobacter concisus 13826 5597709 YP_001466452.1 CDS CCC13826_1580 NC_009802.1 563388 565739 D identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; response regulator of two-component system 563388..565739 Campylobacter concisus 13826 5595871 YP_001466453.1 CDS serB NC_009802.1 566256 566882 D identified by match to protein family HMM PF00702; match to protein family HMM PF06888; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB 566256..566882 Campylobacter concisus 13826 5596178 YP_001466454.1 CDS tal NC_009802.1 566887 567879 D Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase 566887..567879 Campylobacter concisus 13826 5596933 YP_001466455.1 CDS CCC13826_1584 NC_009802.1 567918 569039 D identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein 567918..569039 Campylobacter concisus 13826 5596383 YP_001466456.1 CDS CCC13826_1585 NC_009802.1 569107 569643 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 569107..569643 Campylobacter concisus 13826 5597089 YP_001466457.1 CDS CCC13826_1586 NC_009802.1 569724 570203 D identified by match to protein family HMM PF01195; lipoprotein 569724..570203 Campylobacter concisus 13826 5596644 YP_001466458.1 CDS CCC13826_1587 NC_009802.1 570200 571264 D identified by match to protein family HMM PF03739; tRNA-I(6)A37 thiotransferase enzyme MiaB 570200..571264 Campylobacter concisus 13826 5597596 YP_001466459.1 CDS lysA NC_009802.1 571320 572543 D identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 571320..572543 Campylobacter concisus 13826 5596900 YP_001466460.1 CDS CCC13826_1589 NC_009802.1 572527 573606 D identified by match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807; transcription termination factor NusA 572527..573606 Campylobacter concisus 13826 5596959 YP_001466461.1 CDS hisC NC_009802.1 573606 574703 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 573606..574703 Campylobacter concisus 13826 5595749 YP_001466462.1 CDS fliF NC_009802.1 574708 576405 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 574708..576405 Campylobacter concisus 13826 5597678 YP_001466463.1 CDS fliG NC_009802.1 576405 577436 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 576405..577436 Campylobacter concisus 13826 5597699 YP_001466464.1 CDS fliH NC_009802.1 577433 578305 D binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 577433..578305 Campylobacter concisus 13826 5596878 YP_001466465.1 CDS dxs NC_009802.1 578298 580124 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 578298..580124 Campylobacter concisus 13826 5596165 YP_001466466.1 CDS serC NC_009802.1 584050 585129 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 584050..585129 Campylobacter concisus 13826 5597228 YP_001466467.1 CDS CCC13826_1600 NC_009802.1 585129 586589 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; para protein 585129..586589 Campylobacter concisus 13826 5596563 YP_001466468.1 CDS CCC13826_1601 NC_009802.1 586618 587358 R identified by match to protein family HMM PF01925; Cpp22 complement(586618..587358) Campylobacter concisus 13826 5596679 YP_001466469.1 CDS CCC13826_1602 NC_009802.1 587503 588774 D identified by match to protein family HMM PF00425; anthranilate synthase component 1 (anthranilate synthasecomponent I) 587503..588774 Campylobacter concisus 13826 5596940 YP_001466470.1 CDS CCC13826_1603 NC_009802.1 588995 589300 D identified by glimmer; hypothetical protein 588995..589300 Campylobacter concisus 13826 5596764 YP_001466471.1 CDS CCC13826_1604 NC_009802.1 589648 589770 D hypothetical protein 589648..589770 Campylobacter concisus 13826 5595803 YP_001466472.1 CDS CCC13826_1605 NC_009802.1 590170 591273 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(590170..591273) Campylobacter concisus 13826 5597396 YP_001466473.1 CDS CCC13826_1606 NC_009802.1 591273 592724 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(591273..592724) Campylobacter concisus 13826 5597000 YP_001466474.1 CDS CCC13826_1607 NC_009802.1 592705 593310 R phage integrase family site specific recombinase complement(592705..593310) Campylobacter concisus 13826 5597629 YP_001466475.1 CDS apt NC_009802.1 593312 593860 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(593312..593860) Campylobacter concisus 13826 5596554 YP_001466476.1 CDS CCC13826_1609 NC_009802.1 593881 594213 R hypothetical protein complement(593881..594213) Campylobacter concisus 13826 5597519 YP_001466477.1 CDS rpiB NC_009802.1 594210 594653 R identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B complement(594210..594653) Campylobacter concisus 13826 5595972 YP_001466478.1 CDS CCC13826_0829 NC_009802.1 594763 596148 D identified by glimmer; hypothetical protein 594763..596148 Campylobacter concisus 13826 5596861 YP_001466479.1 CDS CCC13826_0830 NC_009802.1 596167 596823 R identified by match to protein family HMM PF02163; M50 family peptidase complement(596167..596823) Campylobacter concisus 13826 5597643 YP_001466480.1 CDS lepB NC_009802.1 596810 597715 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(596810..597715) Campylobacter concisus 13826 5596489 YP_001466481.1 CDS CCC13826_0832 NC_009802.1 597727 598578 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(597727..598578) Campylobacter concisus 13826 5597154 YP_001466482.1 CDS CCC13826_0833 NC_009802.1 598662 599270 D hypothetical protein 598662..599270 Campylobacter concisus 13826 5596200 YP_001466483.1 CDS hemL NC_009802.1 599267 600550 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 599267..600550 Campylobacter concisus 13826 5596485 YP_001466484.1 CDS CCC13826_0835 NC_009802.1 600550 600831 D hypothetical protein 600550..600831 Campylobacter concisus 13826 5595623 YP_001466485.1 CDS CCC13826_0836 NC_009802.1 600812 601333 D hypothetical protein 600812..601333 Campylobacter concisus 13826 5596324 YP_001466486.1 CDS CCC13826_0837 NC_009802.1 601323 602567 D hypothetical protein 601323..602567 Campylobacter concisus 13826 5597015 YP_001466487.1 CDS CCC13826_0838 NC_009802.1 602571 604217 D hypothetical protein 602571..604217 Campylobacter concisus 13826 5596713 YP_001466488.1 CDS CCC13826_0839 NC_009802.1 604217 604480 D identified by match to protein family HMM TIGR00789; FlhB domain-containing protein 604217..604480 Campylobacter concisus 13826 5596961 YP_001466489.1 CDS CCC13826_0840 NC_009802.1 604547 606247 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF08269; cache domain-contain protein 604547..606247 Campylobacter concisus 13826 5596716 YP_001466490.1 CDS cheB NC_009802.1 606282 606848 D identified by match to protein family HMM PF01339; protein-glutamate methylesterase CheB 606282..606848 Campylobacter concisus 13826 5596506 YP_001466491.1 CDS CCC13826_0843 NC_009802.1 607751 610372 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 607751..610372 Campylobacter concisus 13826 5597210 YP_001466492.1 CDS CCC13826_0845 NC_009802.1 610893 611285 D hypothetical protein 610893..611285 Campylobacter concisus 13826 5597482 YP_001466493.1 CDS CCC13826_0846 NC_009802.1 611298 612452 D identified by match to protein family HMM PF00072; match to protein family HMM PF00158; ornithine/argininedecarboxylase inhibitor; ornithine decarboxylase antizyme; acetoacetate metabolism regulatory protein AtoC 611298..612452 Campylobacter concisus 13826 5597310 YP_001466494.1 CDS CCC13826_0848 NC_009802.1 613596 614009 R identified by match to protein family HMM PF02082; transcriptional regulator superfamily complement(613596..614009) Campylobacter concisus 13826 5595617 YP_001466495.1 CDS CCC13826_0849 NC_009802.1 614111 614509 R identified by glimmer; hypothetical protein complement(614111..614509) Campylobacter concisus 13826 5596575 YP_001466496.1 CDS CCC13826_0850 NC_009802.1 614592 614729 D ABC transporter ATP-binding protein 614592..614729 Campylobacter concisus 13826 5595676 YP_001466497.1 CDS CCC13826_0851 NC_009802.1 614746 615120 R identified by match to protein family HMM PF07883; mate efflux family protein complement(614746..615120) Campylobacter concisus 13826 5596041 YP_001466498.1 CDS CCC13826_0852 NC_009802.1 615272 616156 D hypothetical protein 615272..616156 Campylobacter concisus 13826 5597169 YP_001466499.1 CDS CCC13826_0853 NC_009802.1 616134 617054 D Hsp12 variant C 616134..617054 Campylobacter concisus 13826 5595788 YP_001466500.1 CDS CCC13826_0854 NC_009802.1 617081 617470 D transporter 617081..617470 Campylobacter concisus 13826 5596682 YP_001466501.1 CDS lepA NC_009802.1 617560 619350 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 617560..619350 Campylobacter concisus 13826 5595835 YP_001466502.1 CDS CCC13826_0856 NC_009802.1 619409 619534 D identified by glimmer; hypothetical protein 619409..619534 Campylobacter concisus 13826 5597688 YP_001466503.1 CDS CCC13826_0857 NC_009802.1 619686 619916 D identified by match to protein family HMM PF01361; match to protein family HMM TIGR00013; hypothetical protein 619686..619916 Campylobacter concisus 13826 5596187 YP_001466504.1 CDS CCC13826_0858 NC_009802.1 619910 620632 D outer membrane lipoprotein MapA 619910..620632 Campylobacter concisus 13826 5596272 YP_001466505.1 CDS CCC13826_0859 NC_009802.1 620643 621200 D hypothetical protein 620643..621200 Campylobacter concisus 13826 5597112 YP_001466506.1 CDS CCC13826_0860 NC_009802.1 621200 621769 D identified by glimmer; hypothetical protein 621200..621769 Campylobacter concisus 13826 5596417 YP_001466507.1 CDS CCC13826_0863 NC_009802.1 624622 625557 R carbon-nitrogen family hydrolase complement(624622..625557) Campylobacter concisus 13826 5596667 YP_001466508.1 CDS CCC13826_0864 NC_009802.1 625554 626021 R identified by match to protein family HMM PF00037; 4Fe-4S ferredoxin iron-sulfur binding complement(625554..626021) Campylobacter concisus 13826 5596791 YP_001466509.1 CDS napB NC_009802.1 626021 626548 R identified by match to protein family HMM PF03892; periplasmic nitrate reductase, diheme cytochrome C subunit complement(626021..626548) Campylobacter concisus 13826 5597409 YP_001466510.1 CDS CCC13826_0866 NC_009802.1 626545 627336 R identified by match to protein family HMM PF00037; match to protein family HMM TIGR02163; permease complement(626545..627336) Campylobacter concisus 13826 5597331 YP_001466511.1 CDS napG NC_009802.1 627333 628100 R part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component complement(627333..628100) Campylobacter concisus 13826 5596419 YP_001466512.1 CDS napA NC_009802.1 628103 630883 R periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit complement(628103..630883) Campylobacter concisus 13826 5597288 YP_001466513.1 CDS glnQ NC_009802.1 631840 633789 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; glutamine ABC transporter ATP-binding protein complement(631840..633789) Campylobacter concisus 13826 5596778 YP_001466514.1 CDS CCC13826_0870 NC_009802.1 633907 634449 R identified by match to protein family HMM PF02630; SCO1/SenC family protein complement(633907..634449) Campylobacter concisus 13826 5596639 YP_001466515.1 CDS CCC13826_0871 NC_009802.1 634459 634923 R identified by glimmer; hypothetical protein complement(634459..634923) Campylobacter concisus 13826 5596012 YP_001466516.1 CDS algC NC_009802.1 634923 635345 R identified by match to protein family HMM PF04314; phosphomannomutase complement(634923..635345) Campylobacter concisus 13826 5597698 YP_001466517.1 CDS CCC13826_0873 NC_009802.1 635482 636447 D 60 kDa chaperonin (protein Cpn60; groEL protein) 635482..636447 Campylobacter concisus 13826 5597425 YP_001466518.1 CDS CCC13826_0874 NC_009802.1 636450 636689 D hypothetical protein 636450..636689 Campylobacter concisus 13826 5596606 YP_001466519.1 CDS alr NC_009802.1 636682 637695 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 636682..637695 Campylobacter concisus 13826 5596020 YP_001466520.1 CDS CCC13826_0879 NC_009802.1 639082 639948 R identified by match to protein family HMM PF01435; M48 family peptidase complement(639082..639948) Campylobacter concisus 13826 5596902 YP_001466521.1 CDS CCC13826_0880 NC_009802.1 639957 640319 R identified by glimmer; hypothetical protein complement(639957..640319) Campylobacter concisus 13826 5597641 YP_001466522.1 CDS CCC13826_0881 NC_009802.1 640316 640510 R hypothetical protein complement(640316..640510) Campylobacter concisus 13826 5595753 YP_001466523.1 CDS CCC13826_0882 NC_009802.1 640507 641073 R methyltransferase GidB (glucose-inhibited divisionprotein B) complement(640507..641073) Campylobacter concisus 13826 5595742 YP_001466524.1 CDS ribA NC_009802.1 641073 641636 R catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II complement(641073..641636) Campylobacter concisus 13826 5597280 YP_001466525.1 CDS hemB NC_009802.1 641705 642676 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 641705..642676 Campylobacter concisus 13826 5596246 YP_001466526.1 CDS argF NC_009802.1 642678 643595 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 642678..643595 Campylobacter concisus 13826 5597355 YP_001466527.1 CDS CCC13826_0886 NC_009802.1 643592 644077 D 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 643592..644077 Campylobacter concisus 13826 5597430 YP_001466528.1 CDS hemN NC_009802.1 644070 645431 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 644070..645431 Campylobacter concisus 13826 5596284 YP_001466529.1 CDS CCC13826_0888 NC_009802.1 645545 647224 D identified by match to protein family HMM PF02321; ComEC/Rec2 family protein 645545..647224 Campylobacter concisus 13826 5596796 YP_001466530.1 CDS CCC13826_0889 NC_009802.1 647245 647904 D periplasmic protein 647245..647904 Campylobacter concisus 13826 5597632 YP_001466531.1 CDS CCC13826_0890 NC_009802.1 647901 649850 D identified by match to protein family HMM PF00563; match to protein family HMM PF00672; match to protein family HMM PF00990; MadN protein 647901..649850 Campylobacter concisus 13826 5596249 YP_001466532.1 CDS CCC13826_0891 NC_009802.1 649854 651992 D identified by glimmer; hypothetical protein 649854..651992 Campylobacter concisus 13826 5596858 YP_001466533.1 CDS acrB NC_009802.1 651995 653461 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843; acriflavine resistance protein 651995..653461 Campylobacter concisus 13826 5596279 YP_001466534.1 CDS mtrC NC_009802.1 653461 653958 D membrane fusion protein 653461..653958 Campylobacter concisus 13826 5595983 YP_001466535.1 CDS CCC13826_0894 NC_009802.1 653976 654611 D identified by match to protein family HMM PF00196; outer membrane component of efflux system 653976..654611 Campylobacter concisus 13826 5595697 YP_001466536.1 CDS CCC13826_0895 NC_009802.1 654604 655230 D OmpA/MotB 654604..655230 Campylobacter concisus 13826 5596394 YP_001466537.1 CDS fliP NC_009802.1 655227 655475 R flagellar biosynthesis protein complement(655227..655475) Campylobacter concisus 13826 5596313 YP_001466538.1 CDS tuf NC_009802.1 656302 657501 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 656302..657501 Campylobacter concisus 13826 5596277 YP_001466539.1 CDS secE NC_009802.1 657826 658005 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 657826..658005 Campylobacter concisus 13826 5596433 YP_001466540.1 CDS nusG NC_009802.1 658020 658550 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 658020..658550 Campylobacter concisus 13826 5596156 YP_001466541.1 CDS rplK NC_009802.1 658561 658986 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 658561..658986 Campylobacter concisus 13826 5597702 YP_001466542.1 CDS rplA NC_009802.1 659046 659747 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 659046..659747 Campylobacter concisus 13826 5596541 YP_001466543.1 CDS rplJ NC_009802.1 659851 660336 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 659851..660336 Campylobacter concisus 13826 5596402 YP_001466544.1 CDS rplL NC_009802.1 660365 660742 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 660365..660742 Campylobacter concisus 13826 5595602 YP_004777021.1 CDS rpoB NC_009802.1 660860 665005 D DNA-directed RNA polymerase subunit beta 660860..665005 Campylobacter concisus 13826 5596271 YP_001466545.1 CDS rpoC NC_009802.1 664992 669506 D identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase, beta' subunit 664992..669506 Campylobacter concisus 13826 5597449 YP_001466546.1 CDS CCC13826_0176 NC_009802.1 669640 670029 D identified by match to protein family HMM PF07681; SRC kinase associated phosphoprotein 2 669640..670029 Campylobacter concisus 13826 5596751 YP_001466547.1 CDS nhaC NC_009802.1 670162 671577 D identified by match to protein family HMM PF03553; match to protein family HMM TIGR00931; Na+/H+ antiporter NhaC 670162..671577 Campylobacter concisus 13826 5597148 YP_001466548.1 CDS iadA NC_009802.1 671574 672707 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR01975; isoaspartyl dipeptidase 671574..672707 Campylobacter concisus 13826 5596434 YP_004777022.1 CDS rpsL NC_009802.1 672788 673183 D ribosomal protein S12 672788..673183 Campylobacter concisus 13826 5595847 YP_001466549.1 CDS rpsG NC_009802.1 673262 673732 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 673262..673732 Campylobacter concisus 13826 5597035 YP_001466550.1 CDS CCC13826_1457 NC_009802.1 677249 677836 D hydrogenase-4 component G 677249..677836 Campylobacter concisus 13826 5597457 YP_001466551.1 CDS CCC13826_1458 NC_009802.1 677961 678398 D identified by glimmer; hypothetical protein 677961..678398 Campylobacter concisus 13826 5596982 YP_001466552.1 CDS CCC13826_1459 NC_009802.1 678666 679874 D identified by match to protein family HMM PF05538; hydrogenase-4 component I 678666..679874 Campylobacter concisus 13826 5597007 YP_001466553.1 CDS CCC13826_1460 NC_009802.1 679967 680524 D hypothetical protein 679967..680524 Campylobacter concisus 13826 5595954 YP_001466554.1 CDS CCC13826_1461 NC_009802.1 680570 683665 D identified by match to protein family HMM PF01578; cytochrome C assembly protein 680570..683665 Campylobacter concisus 13826 5595874 YP_001466555.1 CDS CCC13826_1462 NC_009802.1 683666 684100 D FdhC protein 683666..684100 Campylobacter concisus 13826 5596979 YP_001466556.1 CDS CCC13826_1463 NC_009802.1 684179 684784 D hypothetical protein 684179..684784 Campylobacter concisus 13826 5595789 YP_001466557.1 CDS pgpA NC_009802.1 684819 685286 R identified by match to protein family HMM PF04608; phosphatidylglycerophosphatase A complement(684819..685286) Campylobacter concisus 13826 5595924 YP_001466558.1 CDS CCC13826_1465 NC_009802.1 685295 686476 R ATP-sulfurylase family protein complement(685295..686476) Campylobacter concisus 13826 5596204 YP_001466559.1 CDS CCC13826_1466 NC_009802.1 686454 687344 R identified by match to protein family HMM PF00072; integral membrane protein complement(686454..687344) Campylobacter concisus 13826 5596971 YP_001466560.1 CDS ispDF NC_009802.1 687341 688459 R bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein complement(687341..688459) Campylobacter concisus 13826 5597562 YP_001466561.1 CDS thiC NC_009802.1 688606 689901 D identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190; thiamine biosynthesis protein ThiC 688606..689901 Campylobacter concisus 13826 5597463 YP_001466562.1 CDS fixN NC_009802.1 689895 690995 D cytochrome C oxidase heme b and copper-binding subunit, membrane-bound 689895..690995 Campylobacter concisus 13826 5597269 YP_001466563.1 CDS fixO NC_009802.1 691056 691394 D ACT domain-containing protein; hypothetical protein 691056..691394 Campylobacter concisus 13826 5596190 YP_001466564.1 CDS CCC13826_1471 NC_009802.1 691404 692741 D identified by match to protein family HMM PF05167; hypothetical protein 691404..692741 Campylobacter concisus 13826 5596608 YP_001466565.1 CDS fixP NC_009802.1 692845 693534 D cytochrome C oxidase diheme subunit, membrane-bound 692845..693534 Campylobacter concisus 13826 5596615 YP_001466566.1 CDS CCC13826_1473 NC_009802.1 693691 694143 D identified by glimmer; hypothetical protein 693691..694143 Campylobacter concisus 13826 5597582 YP_001466567.1 CDS CCC13826_1474 NC_009802.1 694315 694911 R identified by match to protein family HMM PF07274; hypothetical protein complement(694315..694911) Campylobacter concisus 13826 5597158 YP_001466568.1 CDS CCC13826_1475 NC_009802.1 695072 696271 D identified by glimmer; hypothetical protein 695072..696271 Campylobacter concisus 13826 5596662 YP_001466569.1 CDS CCC13826_1476 NC_009802.1 696283 696777 D lipoprotein 696283..696777 Campylobacter concisus 13826 5597162 YP_001466570.1 CDS CCC13826_1479 NC_009802.1 697690 698115 R GPR; glutamate-5-semialdehyde dehydrogenase; glutamyl-gamma-semialdehydedehydrogenase; GSA dehydrogenase; gamma-glutamyl phosphate reductase complement(697690..698115) Campylobacter concisus 13826 5596769 YP_001466571.1 CDS CCC13826_1480 NC_009802.1 698117 698911 R identified by glimmer; hypothetical protein complement(698117..698911) Campylobacter concisus 13826 5596172 YP_001466572.1 CDS CCC13826_1481 NC_009802.1 699040 700851 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(699040..700851) Campylobacter concisus 13826 5596622 YP_001466573.1 CDS CCC13826_1482 NC_009802.1 700855 703350 R ATP-dependent DNA helicase UvrD complement(700855..703350) Campylobacter concisus 13826 5595970 YP_001466574.1 CDS CCC13826_1483 NC_009802.1 703464 704525 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; hypothetical protein 703464..704525 Campylobacter concisus 13826 5597622 YP_001466575.1 CDS CCC13826_1484 NC_009802.1 704537 705829 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; inner membrane protein YicO 704537..705829 Campylobacter concisus 13826 5597261 YP_001466576.1 CDS cadF NC_009802.1 705842 706282 D identified by match to protein family HMM PF00156; outer membrane fibronectin-binding protein 705842..706282 Campylobacter concisus 13826 5597014 YP_001466577.1 CDS CCC13826_1486 NC_009802.1 706292 707509 D integral membrane protein 706292..707509 Campylobacter concisus 13826 5596943 YP_001466578.1 CDS CCC13826_1487 NC_009802.1 707513 708208 D identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; carbamoyl-phosphate synthase large subunit 707513..708208 Campylobacter concisus 13826 5595898 YP_001466579.1 CDS CCC13826_0702 NC_009802.1 714401 714829 D identified by match to protein family HMM PF01112; NAD(FAD)-utilizing dehydrogenase 714401..714829 Campylobacter concisus 13826 5597334 YP_001466580.1 CDS CCC13826_0703 NC_009802.1 714813 715637 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(714813..715637) Campylobacter concisus 13826 5596490 YP_001466581.1 CDS CCC13826_0701 NC_009802.1 715688 715873 R hypothetical protein complement(715688..715873) Campylobacter concisus 13826 5596456 YP_001466582.1 CDS truA NC_009802.1 716102 716833 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(716102..716833) Campylobacter concisus 13826 5596597 YP_001466583.1 CDS CCC13826_0698 NC_009802.1 716833 717861 R identified by match to protein family HMM PF03739; ribonuclease PH complement(716833..717861) Campylobacter concisus 13826 5596205 YP_001466584.1 CDS CCC13826_0697 NC_009802.1 717854 718642 R identified by match to protein family HMM PF01478; match to protein family HMM PF06750; saccharopine dehydrogenase complement(717854..718642) Campylobacter concisus 13826 5597472 YP_001466585.1 CDS uppS NC_009802.1 718650 719321 R identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase complement(718650..719321) Campylobacter concisus 13826 5597241 YP_001466586.1 CDS glmU NC_009802.1 721167 722477 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(721167..722477) Campylobacter concisus 13826 5596121 YP_001466587.1 CDS CCC13826_0691 NC_009802.1 722614 723381 D identified by match to protein family HMM PF01618; permease 722614..723381 Campylobacter concisus 13826 5596770 YP_001466588.1 CDS CCC13826_0690 NC_009802.1 723501 724160 D identified by match to protein family HMM PF00691; OmpA family protein 723501..724160 Campylobacter concisus 13826 5595902 YP_001466589.1 CDS fliP NC_009802.1 724163 724894 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 724163..724894 Campylobacter concisus 13826 5597631 YP_001466590.1 CDS CCC13826_0688 NC_009802.1 724894 726159 D identified by match to protein family HMM PF02321; Cysteinyl-tRNA(Sec) selenium transferase; Selenocysteine synthase; Selenocysteinyl-tRNA(Sec) synthase; L-seryl-tRNA(Sec) selenium transferase 724894..726159 Campylobacter concisus 13826 5597079 YP_001466591.1 CDS selB NC_009802.1 726156 726899 D selenocysteine-specific elongation factor SelB 726156..726899 Campylobacter concisus 13826 5596270 YP_001466592.1 CDS CCC13826_0686 NC_009802.1 726896 729922 D identified by match to protein family HMM PF00873; RND transporter hydrophobe/amphiphile efflux-1 (HAE1) and heavy metal efflux (HME) families, permease 726896..729922 Campylobacter concisus 13826 5596510 YP_001466593.1 CDS CCC13826_0685 NC_009802.1 729919 731154 D periplasmic protein 729919..731154 Campylobacter concisus 13826 5596871 YP_001466594.1 CDS CCC13826_0684 NC_009802.1 731151 732014 D identified by match to protein family HMM PF00892; hypothetical protein 731151..732014 Campylobacter concisus 13826 5596210 YP_001466595.1 CDS CCC13826_0683 NC_009802.1 732087 732458 R hypothetical protein complement(732087..732458) Campylobacter concisus 13826 5597563 YP_001466596.1 CDS dnaB NC_009802.1 733761 735173 R unwinds double stranded DNA; replicative DNA helicase complement(733761..735173) Campylobacter concisus 13826 5596258 YP_001466597.1 CDS ispG NC_009802.1 735178 736236 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(735178..736236) Campylobacter concisus 13826 5595911 YP_001466598.1 CDS CCC13826_0679 NC_009802.1 736312 736452 R hypothetical protein complement(736312..736452) Campylobacter concisus 13826 5595814 YP_001466599.1 CDS priA NC_009802.1 736849 738699 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(736849..738699) Campylobacter concisus 13826 5595963 YP_001466600.1 CDS CCC13826_0677 NC_009802.1 738699 739112 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; lipoprotein ABC transporter permease complement(738699..739112) Campylobacter concisus 13826 5595907 YP_001466601.1 CDS CCC13826_0676 NC_009802.1 739109 739345 R hypothetical protein complement(739109..739345) Campylobacter concisus 13826 5596842 YP_001466602.1 CDS CCC13826_0675 NC_009802.1 739369 739602 R ABC transporter complement(739369..739602) Campylobacter concisus 13826 5596280 YP_001466603.1 CDS uvrB NC_009802.1 739728 741704 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 739728..741704 Campylobacter concisus 13826 5595989 YP_001466604.1 CDS CCC13826_0673 NC_009802.1 741766 741918 R identified by glimmer; hypothetical protein complement(741766..741918) Campylobacter concisus 13826 5597111 YP_001466605.1 CDS CCC13826_2241 NC_009802.1 742259 742372 R hypothetical protein complement(742259..742372) Campylobacter concisus 13826 5595717 YP_001466606.1 CDS CCC13826_0671 NC_009802.1 742882 743514 D identified by match to protein family HMM PF02567; seryl-tRNA synthetase (serine--tRNA ligase; SerRS) 742882..743514 Campylobacter concisus 13826 5596824 YP_001466607.1 CDS CCC13826_0670 NC_009802.1 743517 744677 R identified by match to protein family HMM PF07690; ProP protein complement(743517..744677) Campylobacter concisus 13826 5595632 YP_001466608.1 CDS CCC13826_0669 NC_009802.1 744678 747221 R tryptophanyl-tRNA synthetase complement(744678..747221) Campylobacter concisus 13826 5596646 YP_001466609.1 CDS groES NC_009802.1 747390 747650 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 747390..747650 Campylobacter concisus 13826 5597586 YP_001466610.1 CDS groEL NC_009802.1 747668 749302 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 747668..749302 Campylobacter concisus 13826 5597229 YP_001466611.1 CDS CCC13826_0666 NC_009802.1 749433 750800 D identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; integral membrane protein 749433..750800 Campylobacter concisus 13826 5597200 YP_001466612.1 CDS CCC13826_0665 NC_009802.1 750829 750954 R phospho-2-dehydro-3-deoxyoctonate aldolase; 3-deoxy-d-manno-octulosonic acid 8-phosphate synthetase; kdo-8-phosphate synthetase; kdo 8-p synthase; kdops; 2-dehydro-3-deoxyphosphooctonate aldolase complement(750829..750954) Campylobacter concisus 13826 5596803 YP_001466613.1 CDS CCC13826_0664 NC_009802.1 751252 752109 R identified by match to protein family HMM PF00497; surface antigen, CjaA complement(751252..752109) Campylobacter concisus 13826 5595837 YP_001466614.1 CDS CCC13826_0663 NC_009802.1 752200 752937 R identified by match to protein family HMM PF00005; SMR family multidrug efflux pump complement(752200..752937) Campylobacter concisus 13826 5596100 YP_001466615.1 CDS sugE NC_009802.1 752939 753607 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; SugE protein complement(752939..753607) Campylobacter concisus 13826 5596780 YP_001466616.1 CDS CCC13826_0661 NC_009802.1 753594 754247 R dmrl synthase; lumazine synthase; riboflavin synthase beta chain; identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; 6,7-dimethyl-8-ribityllumazine synthase complement(753594..754247) Campylobacter concisus 13826 5596664 YP_001466617.1 CDS CCC13826_0660 NC_009802.1 754358 754603 D permease 754358..754603 Campylobacter concisus 13826 5596942 YP_001466618.1 CDS CCC13826_0659 NC_009802.1 754600 755568 D omp decarboxylase; ompdcase; ompdecase; identified by match to protein family HMM PF04371; orotidine 5'-phosphate decarboxylase 754600..755568 Campylobacter concisus 13826 5597083 YP_001466619.1 CDS CCC13826_0657 NC_009802.1 756499 757371 D identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase 756499..757371 Campylobacter concisus 13826 5595792 YP_001466620.1 CDS CCC13826_0656 NC_009802.1 757398 757736 R identified by match to protein family HMM PF00005; pyrimidine dimer DNA glycosylase complement(757398..757736) Campylobacter concisus 13826 5597526 YP_001466621.1 CDS CCC13826_0654 NC_009802.1 757964 758077 D identified by glimmer; hypothetical protein 757964..758077 Campylobacter concisus 13826 5597387 YP_001466622.1 CDS CCC13826_0653 NC_009802.1 758169 758324 R hypothetical protein complement(758169..758324) Campylobacter concisus 13826 5597502 YP_001466623.1 CDS CCC13826_0652 NC_009802.1 758509 758745 R identified by glimmer; hypothetical protein complement(758509..758745) Campylobacter concisus 13826 5595886 YP_001466624.1 CDS CCC13826_0651 NC_009802.1 759004 759303 R identified by match to protein family HMM PF05957; hypothetical protein complement(759004..759303) Campylobacter concisus 13826 5595944 YP_001466625.1 CDS CCC13826_0649 NC_009802.1 759902 760843 D identified by match to protein family HMM TIGR02122; DNA primase 759902..760843 Campylobacter concisus 13826 5596388 YP_001466626.1 CDS CCC13826_2242 NC_009802.1 760835 760960 R periplasmic protein complement(760835..760960) Campylobacter concisus 13826 5596134 YP_001466627.1 CDS CCC13826_0648 NC_009802.1 760931 762997 D identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123; N-carbamoyl-L-amino acid hydrolase (L-carbamoylase) 760931..762997 Campylobacter concisus 13826 5597389 YP_001466628.1 CDS CCC13826_0647 NC_009802.1 763092 763577 R identified by match to protein family HMM PF08238; Hsp12 variant C complement(763092..763577) Campylobacter concisus 13826 5596714 YP_001466629.1 CDS CCC13826_0646 NC_009802.1 763648 764310 R identified by match to protein family HMM PF01863; hypothetical protein complement(763648..764310) Campylobacter concisus 13826 5596389 YP_001466630.1 CDS dcuC NC_009802.1 764286 765605 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; DcuC protein complement(764286..765605) Campylobacter concisus 13826 5595894 YP_001466631.1 CDS CCC13826_0644 NC_009802.1 765702 767633 D identified by match to protein family HMM PF00005; match to protein family HMM PF02463; peptidase T (tripeptide aminopeptidase; aminotripeptidase; tripeptidase) 765702..767633 Campylobacter concisus 13826 5596589 YP_001466632.1 CDS CCC13826_0643 NC_009802.1 767635 768069 D identified by glimmer; hypothetical protein 767635..768069 Campylobacter concisus 13826 5596498 YP_001466633.1 CDS CCC13826_0642 NC_009802.1 768146 769657 D hypothetical protein 768146..769657 Campylobacter concisus 13826 5597289 YP_001466634.1 CDS CCC13826_0641 NC_009802.1 769657 771102 D hypothetical protein 769657..771102 Campylobacter concisus 13826 5595703 YP_001466635.1 CDS CCC13826_1610 NC_009802.1 771229 773169 D hypothetical protein 771229..773169 Campylobacter concisus 13826 5597049 YP_001466636.1 CDS CCC13826_1611 NC_009802.1 773537 774910 D identified by match to protein family HMM PF00209; sodium/neurotransmitter symporter family protein 773537..774910 Campylobacter concisus 13826 5596674 YP_001466637.1 CDS CCC13826_1612 NC_009802.1 774914 776032 D prophage protein gp49 774914..776032 Campylobacter concisus 13826 5597692 YP_001466638.1 CDS CCC13826_1613 NC_009802.1 776041 777243 D identified by match to protein family HMM PF01435; XRE family transcriptional regulator 776041..777243 Campylobacter concisus 13826 5596690 YP_001466639.1 CDS CCC13826_1616 NC_009802.1 778519 779301 D identified by match to protein family HMM PF06738; hypothetical protein 778519..779301 Campylobacter concisus 13826 5597529 YP_001466640.1 CDS CCC13826_1617 NC_009802.1 779294 779809 D hypothetical protein 779294..779809 Campylobacter concisus 13826 5596930 YP_001466641.1 CDS CCC13826_1618 NC_009802.1 779830 780219 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; thioesterase 779830..780219 Campylobacter concisus 13826 5597191 YP_001466642.1 CDS CCC13826_1619 NC_009802.1 780232 781512 R hypothetical protein complement(780232..781512) Campylobacter concisus 13826 5596357 YP_001466643.1 CDS CCC13826_1620 NC_009802.1 781509 782162 R identified by match to protein family HMM PF03167; uracil-DNA glycosylase complement(781509..782162) Campylobacter concisus 13826 5596595 YP_001466644.1 CDS rpmH NC_009802.1 782286 782420 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 782286..782420 Campylobacter concisus 13826 5596914 YP_001466645.1 CDS CCC13826_1621 NC_009802.1 782558 782743 D hypothetical protein 782558..782743 Campylobacter concisus 13826 5596426 YP_001466646.1 CDS CCC13826_1622 NC_009802.1 782740 783081 D identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 782740..783081 Campylobacter concisus 13826 5597193 YP_001466647.1 CDS CCC13826_1623 NC_009802.1 783082 784635 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 783082..784635 Campylobacter concisus 13826 5595987 YP_001466648.1 CDS CCC13826_1624 NC_009802.1 784635 785726 D hypothetical protein 784635..785726 Campylobacter concisus 13826 5596109 YP_001466649.1 CDS trmE NC_009802.1 785723 787048 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 785723..787048 Campylobacter concisus 13826 5595852 YP_001466650.1 CDS CCC13826_1626 NC_009802.1 787090 787671 D identified by match to protein family HMM PF02525; modulator of drug activity B 787090..787671 Campylobacter concisus 13826 5596243 YP_001466651.1 CDS CCC13826_1627 NC_009802.1 787746 788465 D hypothetical protein 787746..788465 Campylobacter concisus 13826 5596798 YP_001466652.1 CDS CCC13826_1629 NC_009802.1 790715 791764 D R2.LlaJI 790715..791764 Campylobacter concisus 13826 5595915 YP_001466653.1 CDS CCC13826_1630 NC_009802.1 791766 792500 D identified by match to protein family HMM PF00226; silent information regulator protein Sir2 791766..792500 Campylobacter concisus 13826 5596094 YP_001466654.1 CDS CCC13826_1631 NC_009802.1 792501 793067 D identified by glimmer; hypothetical protein 792501..793067 Campylobacter concisus 13826 5596081 YP_001466655.1 CDS purH NC_009802.1 793098 794630 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 793098..794630 Campylobacter concisus 13826 5596305 YP_001466656.1 CDS CCC13826_1633 NC_009802.1 794707 795747 D identified by match to protein family HMM PF01625; match to protein family HMM PF01641; match to protein family HMM TIGR00357; match to protein family HMM TIGR00401; peptide methionine sulfoxide reductase family protein 794707..795747 Campylobacter concisus 13826 5597284 YP_001466657.1 CDS CCC13826_1635 NC_009802.1 796161 797351 D peptidase M50 796161..797351 Campylobacter concisus 13826 5596903 YP_001466658.1 CDS CCC13826_1375 NC_009802.1 797357 797653 D identified by match to protein family HMM PF01883; YitW 797357..797653 Campylobacter concisus 13826 5595770 YP_001466659.1 CDS ftsZ NC_009802.1 797927 799066 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(797927..799066) Campylobacter concisus 13826 5596793 YP_001466660.1 CDS ftsA NC_009802.1 799081 800499 R identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA complement(799081..800499) Campylobacter concisus 13826 5596440 YP_001466661.1 CDS CCC13826_1085 NC_009802.1 800505 801962 R GSA; glutamate-1-semialdehyde aminotransferase; GSA-AT; glutamate-1-semialdehyde 2,1-aminomutase complement(800505..801962) Campylobacter concisus 13826 5595766 YP_001466662.1 CDS CCC13826_1084 NC_009802.1 802102 802689 R identified by match to protein family HMM PF00596; hypothetical protein complement(802102..802689) Campylobacter concisus 13826 5596384 YP_001466663.1 CDS mraW NC_009802.1 802735 803739 D identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 802735..803739 Campylobacter concisus 13826 5597107 YP_001466664.1 CDS CCC13826_1082 NC_009802.1 803742 804035 D hypothetical protein 803742..804035 Campylobacter concisus 13826 5595807 YP_001466665.1 CDS CCC13826_1080 NC_009802.1 804026 805975 D FlhB domain-containing protein 804026..805975 Campylobacter concisus 13826 5596301 YP_001466666.1 CDS CCC13826_1081 NC_009802.1 805954 806460 R hypothetical protein complement(805954..806460) Campylobacter concisus 13826 5597223 YP_001466667.1 CDS CCC13826_1079 NC_009802.1 806565 807431 D identified by match to protein family HMM PF01063; methyl-accepting chemotaxis sensory transducer 806565..807431 Campylobacter concisus 13826 5595737 YP_001466668.1 CDS CCC13826_1078 NC_009802.1 807428 807871 D identified by match to protein family HMM PF04463; purine nucleoside phosphorylase 807428..807871 Campylobacter concisus 13826 5597575 YP_001466669.1 CDS CCC13826_1077 NC_009802.1 807864 808358 D chemotaxis protein methyltransferase 807864..808358 Campylobacter concisus 13826 5596676 YP_001466670.1 CDS CCC13826_1076 NC_009802.1 808355 810370 D identified by match to protein family HMM PF00877; DNA gyrase subunit A 808355..810370 Campylobacter concisus 13826 5596056 YP_001466671.1 CDS CCC13826_1075 NC_009802.1 810371 811690 D hypothetical protein 810371..811690 Campylobacter concisus 13826 5596501 YP_001466672.1 CDS CCC13826_1074 NC_009802.1 811687 812226 D periplasmic protein 811687..812226 Campylobacter concisus 13826 5595730 YP_001466673.1 CDS lolA NC_009802.1 812254 812766 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(812254..812766) Campylobacter concisus 13826 5596157 YP_001466674.1 CDS secA NC_009802.1 812864 815470 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 812864..815470 Campylobacter concisus 13826 5597590 YP_001466675.1 CDS CCC13826_1071 NC_009802.1 815522 816721 D identified by match to protein family HMM PF02687; Rrf2 family protein 815522..816721 Campylobacter concisus 13826 5596222 YP_001466676.1 CDS CCC13826_1069 NC_009802.1 817223 817486 R identified by match to protein family HMM PF06769; match to protein family HMM TIGR02116; addiction module antitoxin complement(817223..817486) Campylobacter concisus 13826 5596526 YP_001466677.1 CDS CCC13826_1068 NC_009802.1 817489 817743 R identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; addiction module antitoxin complement(817489..817743) Campylobacter concisus 13826 5595607 YP_001466678.1 CDS CCC13826_1067 NC_009802.1 817823 819448 R identified by match to protein family HMM PF00999; match to protein family HMM PF02254; monovalent cation:proton antiporter-2 (CPA2) family protein complement(817823..819448) Campylobacter concisus 13826 5595729 YP_001466679.1 CDS czcD NC_009802.1 819452 819826 R identified by match to protein family HMM PF00376; cation-efflux system membrane protein complement(819452..819826) Campylobacter concisus 13826 5596924 YP_001466680.1 CDS CCC13826_1065 NC_009802.1 819830 820726 R identified by match to protein family HMM PF00226; match to protein family HMM PF01556; DnaJ domain-containing protein complement(819830..820726) Campylobacter concisus 13826 5595694 YP_001466681.1 CDS CCC13826_1064 NC_009802.1 820882 822285 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; protease DO 820882..822285 Campylobacter concisus 13826 5596077 YP_001466682.1 CDS CCC13826_1063 NC_009802.1 822383 823060 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 822383..823060 Campylobacter concisus 13826 5596195 YP_001466683.1 CDS CCC13826_1062 NC_009802.1 823060 824301 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; sensor histidine kinase 823060..824301 Campylobacter concisus 13826 5596945 YP_001466684.1 CDS CCC13826_1061 NC_009802.1 824332 824769 D identified by glimmer; hypothetical protein 824332..824769 Campylobacter concisus 13826 5597471 YP_001466685.1 CDS CCC13826_1060 NC_009802.1 824956 825099 R identified by glimmer; hypothetical protein complement(824956..825099) Campylobacter concisus 13826 5596632 YP_001466686.1 CDS CCC13826_1059 NC_009802.1 825414 825593 D transformation system protein 825414..825593 Campylobacter concisus 13826 5597330 YP_001466687.1 CDS CCC13826_1058 NC_009802.1 825632 826903 R identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326; methyl-accepting chemotaxis protein complement(825632..826903) Campylobacter concisus 13826 5596975 YP_001466688.1 CDS CCC13826_1057 NC_009802.1 827011 827343 D hypothetical protein 827011..827343 Campylobacter concisus 13826 5597668 YP_001466689.1 CDS CCC13826_1056 NC_009802.1 827340 827963 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; periplasmic protein 827340..827963 Campylobacter concisus 13826 5596695 YP_001466690.1 CDS CCC13826_1055 NC_009802.1 828012 828266 D hypothetical protein 828012..828266 Campylobacter concisus 13826 5596424 YP_001466691.1 CDS CCC13826_1053 NC_009802.1 828286 828690 D hypothetical protein 828286..828690 Campylobacter concisus 13826 5597199 YP_001466692.1 CDS hemA NC_009802.1 829594 830877 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 829594..830877 Campylobacter concisus 13826 5595979 YP_001466693.1 CDS proS NC_009802.1 830867 832567 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 830867..832567 Campylobacter concisus 13826 5596445 YP_001466694.1 CDS CCC13826_1049 NC_009802.1 832564 832995 D hypothetical protein 832564..832995 Campylobacter concisus 13826 5596987 YP_001466695.1 CDS hemC NC_009802.1 833004 833933 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 833004..833933 Campylobacter concisus 13826 5597534 YP_001466696.1 CDS CCC13826_1047 NC_009802.1 833936 834286 D periplasmic protein 833936..834286 Campylobacter concisus 13826 5597001 YP_001466697.1 CDS CCC13826_1046 NC_009802.1 834601 835323 R identified by match to protein family HMM PF04970; NC domain-containing protein complement(834601..835323) Campylobacter concisus 13826 5597350 YP_001466698.1 CDS CCC13826_1045 NC_009802.1 835512 837320 D identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; periplasmic protein 835512..837320 Campylobacter concisus 13826 5596760 YP_001466699.1 CDS CCC13826_1044 NC_009802.1 837623 837775 R CmeU complement(837623..837775) Campylobacter concisus 13826 5597399 YP_001466700.1 CDS CCC13826_1043 NC_009802.1 838162 839181 R hypothetical protein complement(838162..839181) Campylobacter concisus 13826 5597092 YP_001466701.1 CDS CCC13826_1042 NC_009802.1 839245 840066 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 839245..840066 Campylobacter concisus 13826 5595776 YP_001466702.1 CDS truD NC_009802.1 840044 841168 D catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 840044..841168 Campylobacter concisus 13826 5597553 YP_001466703.1 CDS CCC13826_1040 NC_009802.1 841402 842022 R identified by match to protein family HMM PF03575; S51 family peptidase complement(841402..842022) Campylobacter concisus 13826 5596071 YP_001466704.1 CDS CCC13826_1039 NC_009802.1 842481 844451 R protease htpx complement(842481..844451) Campylobacter concisus 13826 5595796 YP_001466705.1 CDS CCC13826_1038 NC_009802.1 844553 844678 D identified by glimmer; hypothetical protein 844553..844678 Campylobacter concisus 13826 5597329 YP_001466706.1 CDS CCC13826_1037 NC_009802.1 845393 845620 R hypothetical protein complement(845393..845620) Campylobacter concisus 13826 5596941 YP_001466707.1 CDS fliS NC_009802.1 845613 845909 R flagellin specific chaperone; flagellar protein FliS complement(845613..845909) Campylobacter concisus 13826 5596450 YP_001466708.1 CDS CCC13826_1035 NC_009802.1 845994 847754 R Also called hook-associated protein 2; involved in flagellin assembly; flagellar capping protein complement(845994..847754) Campylobacter concisus 13826 5597116 YP_001466709.1 CDS flaG NC_009802.1 847757 848152 R possibly involved in flagella export; flagellar protein FlaG complement(847757..848152) Campylobacter concisus 13826 5596159 YP_001466710.1 CDS CCC13826_1033 NC_009802.1 848272 848616 D ornithine carbamoyltransferase (OTCase) 848272..848616 Campylobacter concisus 13826 5597153 YP_001466711.1 CDS CCC13826_1032 NC_009802.1 848613 849179 D identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase 848613..849179 Campylobacter concisus 13826 5597478 YP_001466712.1 CDS flgI NC_009802.1 849236 850288 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 849236..850288 Campylobacter concisus 13826 5596736 YP_001466713.1 CDS CCC13826_1030 NC_009802.1 850288 850587 D hypothetical protein 850288..850587 Campylobacter concisus 13826 5596636 YP_001466714.1 CDS CCC13826_1029 NC_009802.1 850658 850849 D hypothetical protein 850658..850849 Campylobacter concisus 13826 5597400 YP_001466715.1 CDS CCC13826_1028 NC_009802.1 850866 851297 D identified by glimmer; hypothetical protein 850866..851297 Campylobacter concisus 13826 5596147 YP_001466716.1 CDS flgK NC_009802.1 851301 853172 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 851301..853172 Campylobacter concisus 13826 5596161 YP_001466717.1 CDS CCC13826_0709 NC_009802.1 853169 853936 D identified by match to protein family HMM TIGR02757; hypothetical protein 853169..853936 Campylobacter concisus 13826 5595708 YP_001466718.1 CDS sodC NC_009802.1 854003 854539 D identified by match to protein family HMM PF00080; copper/zinc superoxide dismutase 854003..854539 Campylobacter concisus 13826 5597545 YP_001466719.1 CDS CCC13826_0160 NC_009802.1 854684 855445 D identified by match to protein family HMM PF01925; hypothetical protein 854684..855445 Campylobacter concisus 13826 5596064 YP_001466720.1 CDS atpB NC_009802.1 855511 856194 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 855511..856194 Campylobacter concisus 13826 5597287 YP_001466721.1 CDS CCC13826_0157 NC_009802.1 857124 858506 R identified by match to protein family HMM PF02133; cytosine/purines/uracil/thiamine/allantoin family permease complement(857124..858506) Campylobacter concisus 13826 5597023 YP_001466722.1 CDS CCC13826_0154 NC_009802.1 861041 862096 D identified by match to protein family HMM PF00933; glycoside hydrolase family 3 protein 861041..862096 Campylobacter concisus 13826 5597492 YP_001466723.1 CDS CCC13826_0153 NC_009802.1 862206 862658 R arylsulfate sulfotransferase complement(862206..862658) Campylobacter concisus 13826 5596127 YP_001466724.1 CDS rarD NC_009802.1 862651 863481 R identified by match to protein family HMM PF00892; match to protein family HMM TIGR00688; RarD protein complement(862651..863481) Campylobacter concisus 13826 5596226 YP_001466725.1 CDS rarD NC_009802.1 863522 864409 R identified by match to protein family HMM PF00892; match to protein family HMM TIGR00688; RarD protein complement(863522..864409) Campylobacter concisus 13826 5597480 YP_001466726.1 CDS CCC13826_0150 NC_009802.1 864554 865894 D identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358; 3-deoxy-7-phosphoheptulonate synthase 864554..865894 Campylobacter concisus 13826 5595857 YP_001466727.1 CDS CCC13826_0149 NC_009802.1 865918 866880 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulphide oxidoreductase 865918..866880 Campylobacter concisus 13826 5596096 YP_001466728.1 CDS CCC13826_0148 NC_009802.1 866877 869129 D hypothetical protein 866877..869129 Campylobacter concisus 13826 5597429 YP_001466729.1 CDS CCC13826_0147 NC_009802.1 869126 869833 D identified by match to protein family HMM PF05175; methyltransferase small domain-containing protein 869126..869833 Campylobacter concisus 13826 5596163 YP_001466730.1 CDS CCC13826_0146 NC_009802.1 869830 870195 D identified by match to protein family HMM PF03692; hypothetical protein 869830..870195 Campylobacter concisus 13826 5596829 YP_001466731.1 CDS CCC13826_0145 NC_009802.1 870174 871436 D identified by match to protein family HMM PF07719; hypothetical protein 870174..871436 Campylobacter concisus 13826 5597304 YP_001466732.1 CDS CCC13826_0143 NC_009802.1 872218 872703 D identified by match to protein family HMM PF01230; histidine triad domain-containing protein 872218..872703 Campylobacter concisus 13826 5595675 YP_001466733.1 CDS ybbB NC_009802.1 872690 873697 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 872690..873697 Campylobacter concisus 13826 5597176 YP_001466734.1 CDS CCC13826_0141 NC_009802.1 873923 874051 D identified by glimmer; hypothetical protein 873923..874051 Campylobacter concisus 13826 5596822 YP_001466735.1 CDS ilvB NC_009802.1 874141 875838 D catalyzes the formation of 2-acetolactate from pyruvate, leucine resistant; also known as acetolactate synthase 3 large subunit; acetolactate synthase 3 catalytic subunit 874141..875838 Campylobacter concisus 13826 5596396 YP_001466736.1 CDS ilvH NC_009802.1 875835 876302 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 875835..876302 Campylobacter concisus 13826 5596257 YP_001466737.1 CDS lpxD NC_009802.1 876302 877255 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 876302..877255 Campylobacter concisus 13826 5597033 YP_001466738.1 CDS atpD NC_009802.1 877412 877552 R ATP synthase F1 subunit beta complement(877412..877552) Campylobacter concisus 13826 5596934 YP_001466739.1 CDS atpC NC_009802.1 877745 878413 R identified by match to protein family HMM PF01553; ATP synthase F1 subunit epsilon complement(877745..878413) Campylobacter concisus 13826 5597340 YP_001466740.1 CDS CCC13826_0135 NC_009802.1 878400 879707 R periplasmic protein complement(878400..879707) Campylobacter concisus 13826 5595858 YP_001466741.1 CDS purQ NC_009802.1 879701 880366 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I complement(879701..880366) Campylobacter concisus 13826 5595646 YP_001466742.1 CDS purS NC_009802.1 880363 880599 R identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302; phosphoribosylformylglycinamidine synthase, PurS protein complement(880363..880599) Campylobacter concisus 13826 5595643 YP_001466743.1 CDS purC NC_009802.1 880608 881318 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(880608..881318) Campylobacter concisus 13826 5596771 YP_001466744.1 CDS omp NC_009802.1 881335 882642 R identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; peptidoglycan associated lipoprotein complement(881335..882642) Campylobacter concisus 13826 5595657 YP_001466745.1 CDS CCC13826_0095 NC_009802.1 882862 885435 D identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; chaperone ClpB 1 882862..885435 Campylobacter concisus 13826 5597633 YP_001466746.1 CDS slyD NC_009802.1 885486 886184 R fkbp-type peptidyl-prolyl cis-trans isomerases 2 complement(885486..886184) Campylobacter concisus 13826 5597226 YP_001466747.1 CDS tgt NC_009802.1 886174 887304 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(886174..887304) Campylobacter concisus 13826 5596725 YP_001466748.1 CDS CCC13826_0092 NC_009802.1 887383 888489 D 5'-methylthioadenosinenucleosidase; S-adenosylhomocysteine nucleosidase; identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; MTA/SAH nucleosidase 887383..888489 Campylobacter concisus 13826 5597021 YP_001466749.1 CDS CCC13826_0091 NC_009802.1 888486 889226 D identified by match to protein family HMM PF00005; PP-loop family protein 888486..889226 Campylobacter concisus 13826 5595830 YP_001466750.1 CDS CCC13826_0090 NC_009802.1 889227 890168 D identified by match to protein family HMM PF02470; mce related protein 889227..890168 Campylobacter concisus 13826 5597182 YP_001466751.1 CDS CCC13826_0089 NC_009802.1 890165 890725 D hypothetical protein 890165..890725 Campylobacter concisus 13826 5596610 YP_001466752.1 CDS CCC13826_0088 NC_009802.1 890829 892247 D identified by match to protein family HMM PF02080; TrkA domain-containing protein 890829..892247 Campylobacter concisus 13826 5597242 YP_001466753.1 CDS aroB NC_009802.1 892251 893288 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 892251..893288 Campylobacter concisus 13826 5595869 YP_001466754.1 CDS CCC13826_0086 NC_009802.1 893285 894874 D identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein 893285..894874 Campylobacter concisus 13826 5597244 YP_001466755.1 CDS CCC13826_0085 NC_009802.1 894874 896112 D identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; hypothetical protein 894874..896112 Campylobacter concisus 13826 5596276 YP_001466756.1 CDS CCC13826_1351 NC_009802.1 896075 897751 D identified by match to protein family HMM PF00004; match to protein family HMM PF01434; M41 family peptidase 896075..897751 Campylobacter concisus 13826 5595686 YP_001466757.1 CDS CCC13826_1350 NC_009802.1 897765 898304 D identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdenum cofactor synthesis domain-containing protein 897765..898304 Campylobacter concisus 13826 5596846 YP_001466758.1 CDS nifR NC_009802.1 898305 898874 D nitrogen regulation protein nifR3 898305..898874 Campylobacter concisus 13826 5597231 YP_001466759.1 CDS CCC13826_1348 NC_009802.1 899798 901654 D molecular chaperone; heat shock protein 90 899798..901654 Campylobacter concisus 13826 5596111 YP_001466760.1 CDS CCC13826_1347 NC_009802.1 901760 901966 R hypothetical protein complement(901760..901966) Campylobacter concisus 13826 5596514 YP_001466761.1 CDS CCC13826_1346 NC_009802.1 902102 903232 R identified by match to protein family HMM PF02080; match to protein family HMM PF02254; match to protein family HMM PF07885; TrkA domain-containing protein complement(902102..903232) Campylobacter concisus 13826 5597700 YP_001466762.1 CDS rpmB NC_009802.1 903255 903446 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(903255..903446) Campylobacter concisus 13826 5596529 YP_001466763.1 CDS CCC13826_1344 NC_009802.1 903597 904343 D identified by glimmer; hypothetical protein 903597..904343 Campylobacter concisus 13826 5597401 YP_001466764.1 CDS tyrA NC_009802.1 904340 905713 D prephenate dehydrogenase 904340..905713 Campylobacter concisus 13826 5595931 YP_001466765.1 CDS CCC13826_1341 NC_009802.1 906367 907170 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 906367..907170 Campylobacter concisus 13826 5595744 YP_001466766.1 CDS CCC13826_1339 NC_009802.1 907456 907638 D identified by glimmer; hypothetical protein 907456..907638 Campylobacter concisus 13826 5596114 YP_001466767.1 CDS CCC13826_1338 NC_009802.1 907614 907844 D hypothetical protein 907614..907844 Campylobacter concisus 13826 5596416 YP_001466768.1 CDS CCC13826_1337 NC_009802.1 907904 909022 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; carboxypeptidase G2 complement(907904..909022) Campylobacter concisus 13826 5596944 YP_001466769.1 CDS CCC13826_1336 NC_009802.1 909032 909487 R identified by match to protein family HMM PF07670; hypothetical protein complement(909032..909487) Campylobacter concisus 13826 5596678 YP_001466770.1 CDS CCC13826_1335 NC_009802.1 909491 910123 R identified by match to protein family HMM PF07670; endonuclease complement(909491..910123) Campylobacter concisus 13826 5596951 YP_001466771.1 CDS ppk NC_009802.1 910381 912474 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(910381..912474) Campylobacter concisus 13826 5596988 YP_001466772.1 CDS CCC13826_1333 NC_009802.1 912662 913246 R identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052; NUDIX family hydrolase complement(912662..913246) Campylobacter concisus 13826 5596397 YP_001466773.1 CDS mgtE NC_009802.1 913231 914598 R identified by match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter complement(913231..914598) Campylobacter concisus 13826 5595751 YP_001466774.1 CDS CCC13826_1331 NC_009802.1 914608 915777 R identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein complement(914608..915777) Campylobacter concisus 13826 5596681 YP_001466775.1 CDS CCC13826_1330 NC_009802.1 915892 916614 D hypothetical protein 915892..916614 Campylobacter concisus 13826 5597219 YP_001466776.1 CDS moeA NC_009802.1 916618 917439 D identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; molybdopterin biosynthesis protein 916618..917439 Campylobacter concisus 13826 5597230 YP_001466777.1 CDS CCC13826_1328 NC_009802.1 917514 918542 R identified by glimmer; hypothetical protein complement(917514..918542) Campylobacter concisus 13826 5595577 YP_001466778.1 CDS CCC13826_1327 NC_009802.1 918523 919245 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(918523..919245) Campylobacter concisus 13826 5595962 YP_001466779.1 CDS CCC13826_1326 NC_009802.1 919372 920847 R identified by match to protein family HMM PF00171; elongation factor P (EF-P) complement(919372..920847) Campylobacter concisus 13826 5596196 YP_001466780.1 CDS CCC13826_1325 NC_009802.1 920974 922143 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; hypothetical protein complement(920974..922143) Campylobacter concisus 13826 5597056 YP_001466781.1 CDS CCC13826_1324 NC_009802.1 922136 922798 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; extracellular solute-binding protein complement(922136..922798) Campylobacter concisus 13826 5596250 YP_001466782.1 CDS pyk NC_009802.1 922808 923113 R pyruvate kinase complement(922808..923113) Campylobacter concisus 13826 5596835 YP_001466783.1 CDS CCC13826_1322 NC_009802.1 923177 924082 R identified by match to protein family HMM PF03547; auxin efflux carrier (AEC) family protein complement(923177..924082) Campylobacter concisus 13826 5596449 YP_001466784.1 CDS ompR NC_009802.1 924177 925937 R response regulator complement(924177..925937) Campylobacter concisus 13826 5596500 YP_001466785.1 CDS CCC13826_0025 NC_009802.1 926492 927085 R identified by glimmer; hypothetical protein complement(926492..927085) Campylobacter concisus 13826 5596607 YP_001466786.1 CDS CCC13826_0024 NC_009802.1 927078 928199 R recombination protein RecR complement(927078..928199) Campylobacter concisus 13826 5595674 YP_001466787.1 CDS CCC13826_0023 NC_009802.1 928277 928492 R anthranilate synthase component II complement(928277..928492) Campylobacter concisus 13826 5596078 YP_001466788.1 CDS CCC13826_0021 NC_009802.1 929815 930117 R identified by match to protein family HMM PF00216; DNA-binding protein HU 1 (DNA-binding protein II; HB) complement(929815..930117) Campylobacter concisus 13826 5596359 YP_001466789.1 CDS CCC13826_1301 NC_009802.1 933479 933655 R hypothetical protein complement(933479..933655) Campylobacter concisus 13826 5595901 YP_001466790.1 CDS CCC13826_1302 NC_009802.1 933624 935693 D identified by match to protein family HMM PF01580; FtsK/SpoIIIE family protein 933624..935693 Campylobacter concisus 13826 5597265 YP_001466791.1 CDS CCC13826_1303 NC_009802.1 935728 936480 D identified by glimmer; hypothetical protein 935728..936480 Campylobacter concisus 13826 5597175 YP_001466792.1 CDS CCC13826_2247 NC_009802.1 937147 937269 D hypothetical protein 937147..937269 Campylobacter concisus 13826 5597316 YP_001466793.1 CDS CCC13826_1200 NC_009802.1 937483 937692 D identified by match to protein family HMM PF05973; hypothetical protein 937483..937692 Campylobacter concisus 13826 5595932 YP_001466794.1 CDS CCC13826_1201 NC_009802.1 937689 937967 D identified by match to protein family HMM TIGR02684; addiction module antidote protein 937689..937967 Campylobacter concisus 13826 5597218 YP_001466795.1 CDS CCC13826_1203 NC_009802.1 938283 938750 R two-component regulator complement(938283..938750) Campylobacter concisus 13826 5597568 YP_001466796.1 CDS CCC13826_1204 NC_009802.1 938747 938983 R SNF7 family protein complement(938747..938983) Campylobacter concisus 13826 5596916 YP_001466797.1 CDS CCC13826_1205 NC_009802.1 939158 939586 D identified by glimmer; hypothetical protein 939158..939586 Campylobacter concisus 13826 5597302 YP_001466798.1 CDS CCC13826_1206 NC_009802.1 939681 939902 D hypothetical protein 939681..939902 Campylobacter concisus 13826 5595615 YP_001466799.1 CDS CCC13826_2248 NC_009802.1 940179 940298 D identified by glimmer; hypothetical protein 940179..940298 Campylobacter concisus 13826 5595995 YP_001466800.1 CDS ahpC NC_009802.1 940312 940431 D alkyl hydroperoxide reductase 940312..940431 Campylobacter concisus 13826 5596907 YP_001466801.1 CDS CCC13826_1208 NC_009802.1 941167 941817 D 3-oxoacyl-[acyl-carrier-protein] synthase III; beta-ketoacyl-ACP synthase III; KAS III; EcFabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 941167..941817 Campylobacter concisus 13826 5597384 YP_001466802.1 CDS plsX NC_009802.1 941821 942237 D fatty acid/phospholipid synthesis protein 941821..942237 Campylobacter concisus 13826 5596561 YP_001466803.1 CDS CCC13826_1210 NC_009802.1 942241 943365 D identified by glimmer; hypothetical protein 942241..943365 Campylobacter concisus 13826 5595591 YP_001466804.1 CDS CCC13826_1211 NC_009802.1 943316 944458 D identified by match to protein family HMM PF00263; type II and III secretion system protein 943316..944458 Campylobacter concisus 13826 5597272 YP_001466805.1 CDS CCC13826_1212 NC_009802.1 944687 946027 D identified by match to protein family HMM PF05840; nucleoside diphosphate kinase (NDK; NDP kinase; nucleoside-2-P kinase) 944687..946027 Campylobacter concisus 13826 5596739 YP_001466806.1 CDS CCC13826_1213 NC_009802.1 946035 946901 D identified by match to protein family HMM PF00589; ferredoxin 4Fe-4S 946035..946901 Campylobacter concisus 13826 5596481 YP_001466807.1 CDS CCC13826_1216 NC_009802.1 947318 947749 R excinuclease ABC subunit A complement(947318..947749) Campylobacter concisus 13826 5596741 YP_001466808.1 CDS walN NC_009802.1 947801 948682 R identified by match to protein family HMM PF02541; WalN protein complement(947801..948682) Campylobacter concisus 13826 5596048 YP_001466809.1 CDS CCC13826_1218 NC_009802.1 948813 950351 D identified by match to protein family HMM PF01384; phosphate transporter family protein 948813..950351 Campylobacter concisus 13826 5596098 YP_001466810.1 CDS argG NC_009802.1 950534 951757 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 950534..951757 Campylobacter concisus 13826 5596642 YP_001466811.1 CDS rplI NC_009802.1 951781 952227 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 951781..952227 Campylobacter concisus 13826 5596688 YP_001466812.1 CDS rplU NC_009802.1 952228 952761 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 952228..952761 Campylobacter concisus 13826 5595630 YP_001466813.1 CDS hslU NC_009802.1 952770 954092 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 952770..954092 Campylobacter concisus 13826 5596883 YP_001466814.1 CDS era NC_009802.1 954089 954958 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 954089..954958 Campylobacter concisus 13826 5596010 YP_001466815.1 CDS dcuA NC_009802.1 955019 956539 D anaerobic C4-dicarboxylate transporter DcuA 955019..956539 Campylobacter concisus 13826 5596188 YP_001466816.1 CDS CCC13826_1225 NC_009802.1 956536 957183 D hypothetical protein 956536..957183 Campylobacter concisus 13826 5596202 YP_001466817.1 CDS CCC13826_1226 NC_009802.1 957183 957593 D hypothetical protein 957183..957593 Campylobacter concisus 13826 5596356 YP_001466818.1 CDS CCC13826_1227 NC_009802.1 957571 959097 D identified by match to protein family HMM PF00263; match to protein family HMM PF07655; match to protein family HMM TIGR02519; PP family ATPase 957571..959097 Campylobacter concisus 13826 5595701 YP_001466819.1 CDS CCC13826_1228 NC_009802.1 959090 959917 D phosphoribosylaminoimidazole carboxylase 959090..959917 Campylobacter concisus 13826 5596113 YP_001466820.1 CDS CCC13826_1229 NC_009802.1 959910 960785 D identified by glimmer; hypothetical protein 959910..960785 Campylobacter concisus 13826 5597019 YP_001466821.1 CDS CCC13826_1230 NC_009802.1 960782 961321 D identified by glimmer; hypothetical protein 960782..961321 Campylobacter concisus 13826 5597533 YP_001466822.1 CDS CCC13826_1231 NC_009802.1 961321 963072 D identified by match to protein family HMM PF00437; match to protein family HMM PF05157; L(+)-tartrate dehydratase subunit beta (L-TTD beta) 961321..963072 Campylobacter concisus 13826 5596584 YP_001466823.1 CDS CCC13826_1232 NC_009802.1 963069 964304 D identified by match to protein family HMM PF00482; AsnC family transcriptional regulator 963069..964304 Campylobacter concisus 13826 5596118 YP_001466824.1 CDS CCC13826_1233 NC_009802.1 964332 964832 D identified by match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein 964332..964832 Campylobacter concisus 13826 5596508 YP_001466825.1 CDS CCC13826_1234 NC_009802.1 964834 966090 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 964834..966090 Campylobacter concisus 13826 5596326 YP_001466826.1 CDS hemE NC_009802.1 969224 969469 D identified by match to protein family HMM PF01479; uroporphyrinogen decarboxylase 969224..969469 Campylobacter concisus 13826 5597581 YP_001466827.1 CDS CCC13826_1238 NC_009802.1 969469 969867 D identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 969469..969867 Campylobacter concisus 13826 5595727 YP_001466828.1 CDS CCC13826_1239 NC_009802.1 969860 970588 D identified by match to protein family HMM PF00005; ABC-transporter ATP-binding protein 969860..970588 Campylobacter concisus 13826 5597136 YP_001466829.1 CDS rpoN NC_009802.1 970589 971842 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 970589..971842 Campylobacter concisus 13826 5597550 YP_001466830.1 CDS CCC13826_1241 NC_009802.1 971843 972601 R hypothetical protein complement(971843..972601) Campylobacter concisus 13826 5597123 YP_001466831.1 CDS CCC13826_1243 NC_009802.1 972718 973452 D identified by glimmer; hypothetical protein 972718..973452 Campylobacter concisus 13826 5596251 YP_001466832.1 CDS murG NC_009802.1 973444 974466 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(973444..974466) Campylobacter concisus 13826 5597138 YP_001466833.1 CDS CCC13826_1244 NC_009802.1 974463 975635 R identified by match to protein family HMM PF01098; cell cycle protein FtsW complement(974463..975635) Campylobacter concisus 13826 5596474 YP_001466834.1 CDS murI NC_009802.1 975715 976503 D identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067; glutamate racemase 975715..976503 Campylobacter concisus 13826 5597679 YP_001466835.1 CDS CCC13826_1247 NC_009802.1 977321 978100 R identified by match to protein family HMM PF03180; nlpa lipoprotein complement(977321..978100) Campylobacter concisus 13826 5596564 YP_001466836.1 CDS CCC13826_1249 NC_009802.1 979218 979892 R identified by match to protein family HMM PF00528; ABC transporter permease complement(979218..979892) Campylobacter concisus 13826 5596841 YP_001466837.1 CDS CCC13826_1250 NC_009802.1 979892 980848 R identified by match to protein family HMM PF00005; methionine import ATP-binding protein MetN complement(979892..980848) Campylobacter concisus 13826 5596062 YP_001466838.1 CDS CCC13826_1251 NC_009802.1 980881 981867 R identified by match to protein family HMM PF01113; match to protein family HMM PF03447; match to protein family HMM TIGR01921; diaminopimelate dehydrogenase complement(980881..981867) Campylobacter concisus 13826 5597713 YP_001466839.1 CDS valS NC_009802.1 982009 984765 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(982009..984765) Campylobacter concisus 13826 5597559 YP_001466840.1 CDS CCC13826_2252 NC_009802.1 984798 984911 D hypothetical protein 984798..984911 Campylobacter concisus 13826 5597415 YP_001466841.1 CDS CCC13826_1253 NC_009802.1 984887 990010 R identified by match to protein family HMM PF01835; alpha-2-macroglobulin family protein complement(984887..990010) Campylobacter concisus 13826 5597024 YP_001466842.1 CDS CCC13826_1254 NC_009802.1 990012 992180 R identified by match to protein family HMM PF00905; match to protein family HMM PF00912; flagellar P-ring protein (basal body P-ring protein) complement(990012..992180) Campylobacter concisus 13826 5596708 YP_001466843.1 CDS CCC13826_1255 NC_009802.1 992246 994279 D identified by match to protein family HMM PF00580; site-specific DNA methyltransferase 992246..994279 Campylobacter concisus 13826 5595735 YP_001466844.1 CDS CCC13826_1256 NC_009802.1 994333 995526 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; membrane fusion protein (MFP) family auxiliary transporter 994333..995526 Campylobacter concisus 13826 5595896 YP_001466845.1 CDS CCC13826_1257 NC_009802.1 995527 997455 D identified by match to protein family HMM PF00005; match to protein family HMM PF02687; macrolide export ATP-binding/permease MacB 995527..997455 Campylobacter concisus 13826 5595849 YP_001466846.1 CDS CCC13826_1258 NC_009802.1 997457 998803 D HAP2; Filament cap protein; flagellar cap protein; identified by match to protein family HMM PF02321; flagellar hook-associated protein 2 997457..998803 Campylobacter concisus 13826 5596180 YP_001466847.1 CDS fliS NC_009802.1 998808 999299 D flagellar protein 998808..999299 Campylobacter concisus 13826 5597069 YP_001466848.1 CDS CCC13826_1260 NC_009802.1 999832 999993 D hypothetical protein 999832..999993 Campylobacter concisus 13826 5597361 YP_001466849.1 CDS CCC13826_1261 NC_009802.1 1000035 1000532 R identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein complement(1000035..1000532) Campylobacter concisus 13826 5595633 YP_001466850.1 CDS CCC13826_1262 NC_009802.1 1000529 1001341 R identified by match to protein family HMM PF04305; hypothetical protein complement(1000529..1001341) Campylobacter concisus 13826 5597298 YP_001466851.1 CDS CCC13826_1263 NC_009802.1 1001328 1001903 R identified by match to protein family HMM PF01694; peptidase E complement(1001328..1001903) Campylobacter concisus 13826 5596285 YP_001466852.1 CDS CCC13826_1264 NC_009802.1 1001887 1002567 R hypothetical protein complement(1001887..1002567) Campylobacter concisus 13826 5596242 YP_001466853.1 CDS murA NC_009802.1 1002706 1003974 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1002706..1003974 Campylobacter concisus 13826 5597682 YP_001466854.1 CDS CCC13826_1266 NC_009802.1 1003977 1005137 D identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM TIGR00177; MoeA domain-containing protein 1003977..1005137 Campylobacter concisus 13826 5597671 YP_001466855.1 CDS flgA NC_009802.1 1005328 1006134 D required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1005328..1006134 Campylobacter concisus 13826 5596135 YP_001466856.1 CDS CCC13826_1269 NC_009802.1 1006131 1006682 D identified by match to protein family HMM PF02441; match to protein family HMM TIGR00421; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1006131..1006682 Campylobacter concisus 13826 5596894 YP_001466857.1 CDS coaD NC_009802.1 1006679 1007149 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1006679..1007149 Campylobacter concisus 13826 5596763 YP_001466858.1 CDS tmk NC_009802.1 1007151 1007738 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1007151..1007738 Campylobacter concisus 13826 5597435 YP_001466859.1 CDS hisS NC_009802.1 1007768 1008994 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1007768..1008994 Campylobacter concisus 13826 5596341 YP_001466860.1 CDS speA NC_009802.1 1008991 1010826 D catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1008991..1010826 Campylobacter concisus 13826 5596873 YP_001466861.1 CDS CCC13826_1274 NC_009802.1 1010838 1012016 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1010838..1012016 Campylobacter concisus 13826 5597371 YP_001466862.1 CDS thiS NC_009802.1 1012016 1012219 D identified by match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 1012016..1012219 Campylobacter concisus 13826 5596585 YP_001466863.1 CDS thiF NC_009802.1 1012227 1013078 D identified by match to protein family HMM PF00899; match to protein family HMM TIGR02354; thiamine biosynthesis protein ThiF 1012227..1013078 Campylobacter concisus 13826 5595893 YP_001466864.1 CDS thiH NC_009802.1 1013843 1014997 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 1013843..1014997 Campylobacter concisus 13826 5596332 YP_001466865.1 CDS CCC13826_1279 NC_009802.1 1014990 1015604 D identified by match to protein family HMM PF02581; thiamine monophosphate synthase 1014990..1015604 Campylobacter concisus 13826 5596184 YP_001466866.1 CDS CCC13826_1280 NC_009802.1 1015706 1020406 R HAD-superfamily hydrolase, subfamily IA, variant 1 family protein complement(1015706..1020406) Campylobacter concisus 13826 5596318 YP_001466867.1 CDS CCC13826_1281 NC_009802.1 1020726 1021583 R identified by match to protein family HMM PF02754; hypothetical protein complement(1020726..1021583) Campylobacter concisus 13826 5596877 YP_001466868.1 CDS CCC13826_1282 NC_009802.1 1021586 1022551 R identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; O-acetylhomoserine (thiol)-lyase complement(1021586..1022551) Campylobacter concisus 13826 5597254 YP_001466869.1 CDS CCC13826_1283 NC_009802.1 1022561 1024399 R identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01409; succinate dehydrogenase flavoprotein subunit complement(1022561..1024399) Campylobacter concisus 13826 5597203 YP_001466870.1 CDS CCC13826_1284 NC_009802.1 1024626 1024757 D identified by glimmer; hypothetical protein 1024626..1024757 Campylobacter concisus 13826 5596738 YP_001466871.1 CDS CCC13826_1285 NC_009802.1 1024799 1025812 R identified by match to protein family HMM PF01497; periplasmic binding protein complement(1024799..1025812) Campylobacter concisus 13826 5596766 YP_001466872.1 CDS CCC13826_1286 NC_009802.1 1025824 1026600 R identified by match to protein family HMM PF00005; sensor histidine kinase complement(1025824..1026600) Campylobacter concisus 13826 5595797 YP_001466873.1 CDS ompR NC_009802.1 1026597 1027607 R identified by match to protein family HMM PF00950; match to protein family HMM PF01032; response regulator complement(1026597..1027607) Campylobacter concisus 13826 5596516 YP_001466874.1 CDS htrA NC_009802.1 1027600 1028439 R identified by match to protein family HMM PF08241; serine protease complement(1027600..1028439) Campylobacter concisus 13826 5596868 YP_001466875.1 CDS CCC13826_1289 NC_009802.1 1028530 1030713 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein complement(1028530..1030713) Campylobacter concisus 13826 5597446 YP_001466876.1 CDS hspR NC_009802.1 1030921 1031349 R heat shock protein complement(1030921..1031349) Campylobacter concisus 13826 5595800 YP_001466877.1 CDS oorC NC_009802.1 1031390 1031941 R identified by match to protein family HMM PF01558; 2-oxoglutarate-acceptor oxidoreductase subunit OorC complement(1031390..1031941) Campylobacter concisus 13826 5597710 YP_001466878.1 CDS oorB NC_009802.1 1031938 1032783 R identified by match to protein family HMM PF02775; 2-oxoglutarate-acceptor oxidoreductase subunit OorB complement(1031938..1032783) Campylobacter concisus 13826 5596518 YP_001466879.1 CDS oorA NC_009802.1 1032773 1033903 R identified by match to protein family HMM PF01855; 2-oxoglutarate-acceptor oxidoreductase subunit OorA complement(1032773..1033903) Campylobacter concisus 13826 5596581 YP_001466880.1 CDS oorD NC_009802.1 1033900 1034211 R identified by match to protein family HMM PF00037; 2-oxoglutarate-acceptor oxidoreductase subunit OorD complement(1033900..1034211) Campylobacter concisus 13826 5597538 YP_001466881.1 CDS CCC13826_2254 NC_009802.1 1034220 1035113 R identified by match to protein family HMM PF00056; match to protein family HMM PF02866; malate dehydrogenase complement(1034220..1035113) Campylobacter concisus 13826 5597556 YP_001466882.1 CDS CCC13826_1088 NC_009802.1 1035117 1037291 R identified by match to protein family HMM PF03971; monomeric isocitrate dehydrogenase complement(1035117..1037291) Campylobacter concisus 13826 5597410 YP_001466883.1 CDS CCC13826_1089 NC_009802.1 1037343 1038287 R identified by match to protein family HMM PF02618; hypothetical protein complement(1037343..1038287) Campylobacter concisus 13826 5597039 YP_001466884.1 CDS CCC13826_1090 NC_009802.1 1038361 1040826 D hypothetical protein 1038361..1040826 Campylobacter concisus 13826 5596274 YP_001466885.1 CDS CCC13826_1091 NC_009802.1 1040894 1041307 R ATPase complement(1040894..1041307) Campylobacter concisus 13826 5596345 YP_001466886.1 CDS hypA NC_009802.1 1041500 1041841 R identified by match to protein family HMM PF01155; match to protein family HMM TIGR00100; hydrogenase nickel insertion protein HypA complement(1041500..1041841) Campylobacter concisus 13826 5595947 YP_001466887.1 CDS hypE NC_009802.1 1041841 1042833 R identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE complement(1041841..1042833) Campylobacter concisus 13826 5596008 YP_001466888.1 CDS hypD NC_009802.1 1042842 1043930 R identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075; hydrogenase expression/formation protein HypD complement(1042842..1043930) Campylobacter concisus 13826 5597454 YP_001466889.1 CDS hypC NC_009802.1 1043930 1044169 R identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC/HupF complement(1043930..1044169) Campylobacter concisus 13826 5596381 YP_001466890.1 CDS hypB NC_009802.1 1044169 1044981 R identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase accessory protein HypB complement(1044169..1044981) Campylobacter concisus 13826 5597151 YP_001466891.1 CDS CCC13826_1097 NC_009802.1 1045106 1045756 R hypothetical protein complement(1045106..1045756) Campylobacter concisus 13826 5596021 YP_001466892.1 CDS CCC13826_1098 NC_009802.1 1045753 1047015 R hypothetical protein complement(1045753..1047015) Campylobacter concisus 13826 5596053 YP_001466893.1 CDS CCC13826_2255 NC_009802.1 1047129 1047332 D identified by glimmer; hypothetical protein 1047129..1047332 Campylobacter concisus 13826 5597597 YP_001466894.1 CDS CCC13826_0355 NC_009802.1 1047378 1047791 R Inhibits transcription at high concentrations of nickel; nickel responsive regulator complement(1047378..1047791) Campylobacter concisus 13826 5597124 YP_001466895.1 CDS hypF NC_009802.1 1047837 1050062 R identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF complement(1047837..1050062) Campylobacter concisus 13826 5596670 YP_001466896.1 CDS CCC13826_0097 NC_009802.1 1050046 1051518 R hypothetical protein complement(1050046..1051518) Campylobacter concisus 13826 5597311 YP_001466897.1 CDS CCC13826_0098 NC_009802.1 1051515 1052057 R hydrogenase maturation protease HydD complement(1051515..1052057) Campylobacter concisus 13826 5596350 YP_001466898.1 CDS pabC NC_009802.1 1052747 1054465 R identified by match to protein family HMM PF00374; aminodeoxychorismate lyase complement(1052747..1054465) Campylobacter concisus 13826 5596303 YP_001466899.1 CDS CCC13826_0101 NC_009802.1 1054475 1055680 R identified by match to protein family HMM PF01058; match to protein family HMM PF08425; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409; periplasmic protein complement(1054475..1055680) Campylobacter concisus 13826 5596215 YP_001466900.1 CDS flgH NC_009802.1 1055962 1056669 R part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein complement(1055962..1056669) Campylobacter concisus 13826 5596574 YP_001466901.1 CDS CCC13826_0103 NC_009802.1 1056736 1058103 D identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651; hydrogenase expression/synthesis, HypA 1056736..1058103 Campylobacter concisus 13826 5595934 YP_001466902.1 CDS ackA NC_009802.1 1058105 1059298 D AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1058105..1059298 Campylobacter concisus 13826 5597300 YP_001466903.1 CDS hypD NC_009802.1 1059301 1060365 D identified by match to protein family HMM PF00589; hydrogenase expression/formation protein 1059301..1060365 Campylobacter concisus 13826 5596166 YP_001466904.1 CDS CCC13826_0106 NC_009802.1 1060412 1060639 D hypothetical protein 1060412..1060639 Campylobacter concisus 13826 5597074 YP_001466905.1 CDS CCC13826_0108 NC_009802.1 1061149 1061598 R identified by glimmer; hypothetical protein complement(1061149..1061598) Campylobacter concisus 13826 5596700 YP_001466906.1 CDS CCC13826_0109 NC_009802.1 1061595 1063019 R identified by match to protein family HMM PF02875; match to protein family HMM PF08245; Mur ligase middle domain-containing protein complement(1061595..1063019) Campylobacter concisus 13826 5596788 YP_001466907.1 CDS CCC13826_0111 NC_009802.1 1063791 1064021 R hypothetical protein complement(1063791..1064021) Campylobacter concisus 13826 5595616 YP_001466908.1 CDS ruvA NC_009802.1 1065138 1065692 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(1065138..1065692) Campylobacter concisus 13826 5595731 YP_001466909.1 CDS cysS NC_009802.1 1069133 1070527 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1069133..1070527 Campylobacter concisus 13826 5597333 YP_001466910.1 CDS CCC13826_0117 NC_009802.1 1070520 1072244 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; lipid A export ATP-binding/permease MsbA 1070520..1072244 Campylobacter concisus 13826 5596805 YP_001466911.1 CDS pyrD NC_009802.1 1072298 1073371 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1072298..1073371 Campylobacter concisus 13826 5596701 YP_001466912.1 CDS CCC13826_0119 NC_009802.1 1073383 1074624 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; cytochrome C551 peroxidase (cytochrome Cperoxidase) 1073383..1074624 Campylobacter concisus 13826 5597601 YP_001466913.1 CDS dapA NC_009802.1 1074627 1075520 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1074627..1075520 Campylobacter concisus 13826 5597379 YP_001466914.1 CDS CCC13826_0121 NC_009802.1 1075520 1076308 D Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase 1075520..1076308 Campylobacter concisus 13826 5597213 YP_001466915.1 CDS pgsA NC_009802.1 1076286 1076885 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1076286..1076885 Campylobacter concisus 13826 5596034 YP_001466916.1 CDS CCC13826_0123 NC_009802.1 1076888 1077904 D identified by match to protein family HMM PF01594; hypothetical protein 1076888..1077904 Campylobacter concisus 13826 5597459 YP_001466917.1 CDS rseP NC_009802.1 1077926 1079035 D identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; RIP metalloprotease RseP 1077926..1079035 Campylobacter concisus 13826 5597037 YP_001466918.1 CDS CCC13826_0125 NC_009802.1 1079032 1079670 D identified by match to protein family HMM TIGR00044; hypothetical protein 1079032..1079670 Campylobacter concisus 13826 5596651 YP_001466919.1 CDS CCC13826_0126 NC_009802.1 1079781 1080323 D identified by match to protein family HMM PF08238; cytochrome C haem-binding periplasmic protein 1079781..1080323 Campylobacter concisus 13826 5595850 YP_001466920.1 CDS CCC13826_0127 NC_009802.1 1080429 1081529 D flagellar basal-body rod protein FlgG (Distal rod protein) 1080429..1081529 Campylobacter concisus 13826 5596776 YP_001466921.1 CDS CCC13826_1306 NC_009802.1 1088099 1089439 R hypothetical protein complement(1088099..1089439) Campylobacter concisus 13826 5597237 YP_001466922.1 CDS yihK NC_009802.1 1089436 1090005 R identified by match to protein family HMM PF09335; GTP-binding protein complement(1089436..1090005) Campylobacter concisus 13826 5596600 YP_001466923.1 CDS CCC13826_1309 NC_009802.1 1090608 1092125 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(1090608..1092125) Campylobacter concisus 13826 5597356 YP_001466924.1 CDS CCC13826_1310 NC_009802.1 1092082 1092726 R identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5,10-methenyltetrahydrofolate synthetase complement(1092082..1092726) Campylobacter concisus 13826 5595926 YP_001466925.1 CDS CCC13826_1311 NC_009802.1 1092776 1093411 D identified by match to protein family HMM PF00085; match to protein family HMM PF08534; transporter 1092776..1093411 Campylobacter concisus 13826 5597152 YP_001466926.1 CDS ftsY NC_009802.1 1093411 1094277 D identified by match to protein family HMM PF00448; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 1093411..1094277 Campylobacter concisus 13826 5595836 YP_001466927.1 CDS nrfG NC_009802.1 1094270 1094632 D identified by match to protein family HMM PF04892; hypothetical protein 1094270..1094632 Campylobacter concisus 13826 5597536 YP_001466928.1 CDS radA NC_009802.1 1094607 1095947 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1094607..1095947 Campylobacter concisus 13826 5597451 YP_001466929.1 CDS CCC13826_1315 NC_009802.1 1095961 1096128 D identified by glimmer; hypothetical protein 1095961..1096128 Campylobacter concisus 13826 5596321 YP_001466930.1 CDS CCC13826_1316 NC_009802.1 1096166 1096291 R 2-hydroxyglutaryl-CoA dehydratase component A; activator of (R)-2-hydroxyglutaryl-CoA dehydratase complement(1096166..1096291) Campylobacter concisus 13826 5597270 YP_001466931.1 CDS CCC13826_1317 NC_009802.1 1096550 1097101 R 2-hydroxyglutaryl-CoA dehydratase, D-component complement(1096550..1097101) Campylobacter concisus 13826 5597691 YP_001466932.1 CDS CCC13826_1318 NC_009802.1 1097173 1097790 R identified by glimmer; hypothetical protein complement(1097173..1097790) Campylobacter concisus 13826 5595881 YP_001466933.1 CDS acpS NC_009802.1 1097898 1098242 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(1097898..1098242) Campylobacter concisus 13826 5596262 YP_001466934.1 CDS fliL NC_009802.1 1098239 1098775 R interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL complement(1098239..1098775) Campylobacter concisus 13826 5597515 YP_001466935.1 CDS ybaK NC_009802.1 1098834 1099316 D identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; YbaK/ebsC protein 1098834..1099316 Campylobacter concisus 13826 5597673 YP_001466936.1 CDS CCC13826_1377 NC_009802.1 1099305 1100291 R identified by match to protein family HMM PF02636; dihydrodipicolinate reductase (dhpr) complement(1099305..1100291) Campylobacter concisus 13826 5596167 YP_001466937.1 CDS CCC13826_1380 NC_009802.1 1100288 1100896 R identified by match to protein family HMM PF03458; thioredoxin reductase complement(1100288..1100896) Campylobacter concisus 13826 5596247 YP_001466938.1 CDS CCC13826_1381 NC_009802.1 1101014 1101679 D hypothetical protein 1101014..1101679 Campylobacter concisus 13826 5596070 YP_001466939.1 CDS CCC13826_1382 NC_009802.1 1101790 1101999 R hypothetical protein complement(1101790..1101999) Campylobacter concisus 13826 5596181 YP_001466940.1 CDS CCC13826_1383 NC_009802.1 1102150 1102596 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 1102150..1102596 Campylobacter concisus 13826 5596298 YP_001466941.1 CDS CCC13826_1384 NC_009802.1 1102699 1103022 D hypothetical protein 1102699..1103022 Campylobacter concisus 13826 5597374 YP_001466942.1 CDS CCC13826_1385 NC_009802.1 1103015 1103665 D aminotransferase 1103015..1103665 Campylobacter concisus 13826 5596151 YP_001466943.1 CDS CCC13826_1386 NC_009802.1 1103658 1104008 D hypothetical protein 1103658..1104008 Campylobacter concisus 13826 5596076 YP_001466944.1 CDS CCC13826_1387 NC_009802.1 1104018 1104332 D hypothetical protein 1104018..1104332 Campylobacter concisus 13826 5597481 YP_001466945.1 CDS CCC13826_1388 NC_009802.1 1104332 1104652 D RNA methyltransferase 1104332..1104652 Campylobacter concisus 13826 5596444 YP_001466946.1 CDS CCC13826_1389 NC_009802.1 1104636 1106711 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; tetrapyrrole methylase 1104636..1106711 Campylobacter concisus 13826 5596773 YP_001466947.1 CDS CCC13826_1390 NC_009802.1 1106729 1108189 D identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; hypothetical protein 1106729..1108189 Campylobacter concisus 13826 5596592 YP_001466948.1 CDS CCC13826_1391 NC_009802.1 1108200 1108457 D hypothetical protein 1108200..1108457 Campylobacter concisus 13826 5595793 YP_001466949.1 CDS modD NC_009802.1 1108459 1109292 D identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR01334; ModD protein 1108459..1109292 Campylobacter concisus 13826 5597501 YP_001466950.1 CDS CCC13826_1393 NC_009802.1 1109817 1109954 D identified by glimmer; hypothetical protein 1109817..1109954 Campylobacter concisus 13826 5595999 YP_001466951.1 CDS CCC13826_1394 NC_009802.1 1110019 1111989 R 6-pyruvoyl tetrahydrobiopterin synthase (ptps; ptp synthase) complement(1110019..1111989) Campylobacter concisus 13826 5597593 YP_001466952.1 CDS CCC13826_1395 NC_009802.1 1112312 1114879 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR00509; match to protein family HMM TIGR01409; radical SAM domain-containing protein complement(1112312..1114879) Campylobacter concisus 13826 5596767 YP_001466953.1 CDS CCC13826_1396 NC_009802.1 1115124 1117631 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; molybdenum cofactor biosynthesis protein A complement(1115124..1117631) Campylobacter concisus 13826 5596065 YP_001466954.1 CDS CCC13826_1397 NC_009802.1 1117787 1118005 D identified by glimmer; hypothetical protein 1117787..1118005 Campylobacter concisus 13826 5596371 YP_001466955.1 CDS CCC13826_1398 NC_009802.1 1118231 1118806 R cytochrome C haem-binding periplasmic protein complement(1118231..1118806) Campylobacter concisus 13826 5595690 YP_001466956.1 CDS ubiA NC_009802.1 1118904 1119365 R identified by match to protein family HMM PF00892; 4-hydroxybenzoate octaprenyltransferase complement(1118904..1119365) Campylobacter concisus 13826 5595622 YP_001466957.1 CDS CCC13826_1400 NC_009802.1 1119378 1120301 R identified by match to protein family HMM PF04261; match to protein family HMM TIGR01413; Dyp-type peroxidase complement(1119378..1120301) Campylobacter concisus 13826 5595838 YP_001466958.1 CDS CCC13826_1401 NC_009802.1 1120325 1121020 R hypothetical protein complement(1120325..1121020) Campylobacter concisus 13826 5597075 YP_001466959.1 CDS CCC13826_1402 NC_009802.1 1121077 1121910 R identified by match to protein family HMM PF00753; glyoxalase II complement(1121077..1121910) Campylobacter concisus 13826 5596535 YP_001466960.1 CDS ilvA NC_009802.1 1122003 1123214 R catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase complement(1122003..1123214) Campylobacter concisus 13826 5596591 YP_001466961.1 CDS trmA NC_009802.1 1123236 1124339 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(1123236..1124339) Campylobacter concisus 13826 5596781 YP_001466962.1 CDS CCC13826_1405 NC_009802.1 1124342 1126045 R identified by match to protein family HMM PF03553; Na(+)/H(+) antiporter family protein complement(1124342..1126045) Campylobacter concisus 13826 5596349 YP_001466963.1 CDS CCC13826_1406 NC_009802.1 1126055 1126801 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein complement(1126055..1126801) Campylobacter concisus 13826 5595608 YP_001466964.1 CDS CCC13826_1407 NC_009802.1 1126810 1128021 R identified by glimmer; hypothetical protein complement(1126810..1128021) Campylobacter concisus 13826 5597137 YP_001466965.1 CDS acnB NC_009802.1 1128058 1130643 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(1128058..1130643) Campylobacter concisus 13826 5596365 YP_001466966.1 CDS CCC13826_1409 NC_009802.1 1130655 1131224 D identified by match to protein family HMM PF01035; match to protein family HMM PF02870; match to protein family HMM TIGR00589; methylated-DNA-[protein]-cysteine S-methyltransferase 1130655..1131224 Campylobacter concisus 13826 5597027 YP_001466967.1 CDS CCC13826_1410 NC_009802.1 1131261 1134356 R identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I restriction enzyme EcoR124II R protein (R.EcoR124II) complement(1131261..1134356) Campylobacter concisus 13826 5595680 YP_001466968.1 CDS CCC13826_1411 NC_009802.1 1134367 1135515 R identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein complement(1134367..1135515) Campylobacter concisus 13826 5596164 YP_001466969.1 CDS hsdM NC_009802.1 1135512 1137065 R identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497; type I restriction-modification system, M subunit complement(1135512..1137065) Campylobacter concisus 13826 5597674 YP_001466970.1 CDS CCC13826_1413 NC_009802.1 1137076 1138089 R bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(1137076..1138089) Campylobacter concisus 13826 5596139 YP_001466971.1 CDS CCC13826_2263 NC_009802.1 1139091 1139210 R identified by glimmer; hypothetical protein complement(1139091..1139210) Campylobacter concisus 13826 5597423 YP_001466972.1 CDS CCC13826_1418 NC_009802.1 1139203 1139895 D identified by glimmer; hypothetical protein 1139203..1139895 Campylobacter concisus 13826 5596124 YP_001466973.1 CDS CCC13826_1419 NC_009802.1 1140066 1141832 D hypothetical protein 1140066..1141832 Campylobacter concisus 13826 5596800 YP_001466974.1 CDS csh NC_009802.1 1141843 1142784 D identified by match to protein family HMM PF05107; match to protein family HMM TIGR01595; match to protein family HMM TIGR02590; CRISPR-associated protein Csh2 1141843..1142784 Campylobacter concisus 13826 5597475 YP_001466975.1 CDS cas NC_009802.1 1142786 1143496 D identified by match to protein family HMM TIGR02593; CRISPR-associated protein Cas5 1142786..1143496 Campylobacter concisus 13826 5597398 YP_001466976.1 CDS cas NC_009802.1 1143474 1145675 D identified by match to protein family HMM PF00270; match to protein family HMM TIGR01587; CRISPR-associated helicase Cas3 domain-containing protein 1143474..1145675 Campylobacter concisus 13826 5596213 YP_001466977.1 CDS cas NC_009802.1 1145675 1146175 D identified by match to protein family HMM PF01930; match to protein family HMM TIGR00372; CRISPR-associated protein Cas4 1145675..1146175 Campylobacter concisus 13826 5597086 YP_001466978.1 CDS cas NC_009802.1 1146184 1146462 D identified by match to protein family HMM PF02647; match to protein family HMM TIGR01573; CRISPR-associated protein Cas2 1146184..1146462 Campylobacter concisus 13826 5596363 YP_001466979.1 CDS cas NC_009802.1 1146472 1147470 D identified by match to protein family HMM PF01867; match to protein family HMM TIGR00287; CRISPR-associated protein Cas1 1146472..1147470 Campylobacter concisus 13826 5596316 YP_001466980.1 CDS CCC13826_2264 NC_009802.1 1147647 1147808 D hypothetical protein 1147647..1147808 Campylobacter concisus 13826 5596103 YP_001466981.1 CDS CCC13826_1426 NC_009802.1 1147850 1148128 R identified by match to protein family HMM TIGR02684; addiction module antidote protein complement(1147850..1148128) Campylobacter concisus 13826 5595943 YP_001466982.1 CDS CCC13826_1427 NC_009802.1 1148125 1148418 R identified by match to protein family HMM PF05973; hypothetical protein complement(1148125..1148418) Campylobacter concisus 13826 5596072 YP_001466983.1 CDS CCC13826_1428 NC_009802.1 1148800 1149321 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; hypothetical protein complement(1148800..1149321) Campylobacter concisus 13826 5595818 YP_001466984.1 CDS rplS NC_009802.1 1149458 1149814 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(1149458..1149814) Campylobacter concisus 13826 5596523 YP_001466985.1 CDS trmD NC_009802.1 1149823 1150515 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(1149823..1150515) Campylobacter concisus 13826 5597183 YP_001466986.1 CDS rimM NC_009802.1 1150512 1151042 R identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM complement(1150512..1151042) Campylobacter concisus 13826 5597088 YP_001466987.1 CDS CCC13826_1432 NC_009802.1 1151035 1151277 R identified by glimmer; hypothetical protein complement(1151035..1151277) Campylobacter concisus 13826 5597236 YP_001466988.1 CDS rpsP NC_009802.1 1151277 1151579 R identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; ribosomal protein S16 complement(1151277..1151579) Campylobacter concisus 13826 5597706 YP_001466989.1 CDS ffh NC_009802.1 1151576 1152916 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(1151576..1152916) Campylobacter concisus 13826 5596128 YP_001466990.1 CDS CCC13826_1435 NC_009802.1 1152979 1153737 R identified by match to protein family HMM PF00849; RNA pseudouridine synthase family protein complement(1152979..1153737) Campylobacter concisus 13826 5595584 YP_001466991.1 CDS CCC13826_1436 NC_009802.1 1153734 1154870 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(1153734..1154870) Campylobacter concisus 13826 5595910 YP_001466992.1 CDS CCC13826_1437 NC_009802.1 1154879 1155586 R identified by match to protein family HMM PF02591; hypothetical protein complement(1154879..1155586) Campylobacter concisus 13826 5597527 YP_001466993.1 CDS CCC13826_1438 NC_009802.1 1155604 1156326 R identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein complement(1155604..1156326) Campylobacter concisus 13826 5597034 YP_001466994.1 CDS glyQ NC_009802.1 1156333 1157193 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(1156333..1157193) Campylobacter concisus 13826 5597509 YP_001466995.1 CDS CCC13826_1440 NC_009802.1 1157204 1157620 R identified by match to protein family HMM PF06445; transcription activator effector binding subunit complement(1157204..1157620) Campylobacter concisus 13826 5596879 YP_001466996.1 CDS CCC13826_1441 NC_009802.1 1157624 1158097 R hypothetical protein complement(1157624..1158097) Campylobacter concisus 13826 5595631 YP_001466997.1 CDS CCC13826_1444 NC_009802.1 1159859 1160617 R identified by glimmer; hypothetical protein complement(1159859..1160617) Campylobacter concisus 13826 5597155 YP_001466998.1 CDS CCC13826_1445 NC_009802.1 1160754 1161533 D identified by match to protein family HMM PF02811; match to protein family HMM TIGR01856; PHP domain-containing protein 1160754..1161533 Campylobacter concisus 13826 5595967 YP_001466999.1 CDS glnA NC_009802.1 1161621 1163051 D identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase 1161621..1163051 Campylobacter concisus 13826 5597577 YP_001467000.1 CDS CCC13826_1447 NC_009802.1 1163578 1163694 R identified by glimmer; hypothetical protein complement(1163578..1163694) Campylobacter concisus 13826 5595959 YP_001467001.1 CDS CCC13826_1448 NC_009802.1 1163804 1165468 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau complement(1163804..1165468) Campylobacter concisus 13826 5596527 YP_001467002.1 CDS CCC13826_1449 NC_009802.1 1165547 1166194 D identified by match to protein family HMM PF01810; LysE family translocator protein 1165547..1166194 Campylobacter concisus 13826 5595998 YP_001467003.1 CDS CCC13826_1450 NC_009802.1 1166398 1168776 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; ATPase P complement(1166398..1168776) Campylobacter concisus 13826 5596570 YP_001467004.1 CDS CCC13826_1451 NC_009802.1 1168773 1169393 R identified by match to protein family HMM PF08348; hypothetical protein complement(1168773..1169393) Campylobacter concisus 13826 5596812 YP_001467005.1 CDS CCC13826_1452 NC_009802.1 1169540 1169923 D identified by match to protein family HMM PF01042; L-PSP family endoribonuclease 1169540..1169923 Campylobacter concisus 13826 5595603 YP_001467006.1 CDS CCC13826_1453 NC_009802.1 1169935 1171020 D identified by match to protein family HMM PF00291; threonine synthase 1169935..1171020 Campylobacter concisus 13826 5596657 YP_001467007.1 CDS CCC13826_2265 NC_009802.1 1171003 1171128 R identified by glimmer; hypothetical protein complement(1171003..1171128) Campylobacter concisus 13826 5597263 YP_001467008.1 CDS rho NC_009802.1 1171184 1172527 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1171184..1172527 Campylobacter concisus 13826 5596918 YP_001467009.1 CDS CCC13826_0604 NC_009802.1 1172698 1173168 D GatB/Yqey family protein 1172698..1173168 Campylobacter concisus 13826 5597531 YP_001467010.1 CDS CCC13826_0602 NC_009802.1 1173227 1173439 R Ppx/GppA family phosphatase complement(1173227..1173439) Campylobacter concisus 13826 5595688 YP_001467011.1 CDS CCC13826_0601 NC_009802.1 1173600 1174199 D outer membrane protein 1173600..1174199 Campylobacter concisus 13826 5596057 YP_001467012.1 CDS CCC13826_0600 NC_009802.1 1174248 1174727 R identified by match to protein family HMM PF00583; argininosuccinate synthase (citrulline--aspartateligase) complement(1174248..1174727) Campylobacter concisus 13826 5596731 YP_001467013.1 CDS nusA NC_009802.1 1174727 1175830 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(1174727..1175830) Campylobacter concisus 13826 5596192 YP_001467014.1 CDS CCC13826_0598 NC_009802.1 1176004 1176246 D hypothetical protein 1176004..1176246 Campylobacter concisus 13826 5596261 YP_001467015.1 CDS miaB NC_009802.1 1176246 1177547 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1176246..1177547 Campylobacter concisus 13826 5596320 YP_001467016.1 CDS era NC_009802.1 1177528 1178307 D GTP-binding protein 1177528..1178307 Campylobacter concisus 13826 5597627 YP_001467017.1 CDS CCC13826_0595 NC_009802.1 1178297 1178743 D identified by glimmer; hypothetical protein 1178297..1178743 Campylobacter concisus 13826 5595906 YP_001467018.1 CDS CCC13826_0594 NC_009802.1 1178804 1179808 D identified by glimmer; hypothetical protein 1178804..1179808 Campylobacter concisus 13826 5595747 YP_001467019.1 CDS CCC13826_0593 NC_009802.1 1179805 1180326 D hypothetical protein 1179805..1180326 Campylobacter concisus 13826 5597286 YP_001467020.1 CDS CCC13826_0592 NC_009802.1 1180319 1180855 D hypothetical protein 1180319..1180855 Campylobacter concisus 13826 5595951 YP_001467021.1 CDS CCC13826_0590 NC_009802.1 1180914 1181447 D identified by match to protein family HMM PF00486; transcriptional regulatory protein, C 1180914..1181447 Campylobacter concisus 13826 5596715 YP_001467022.1 CDS CCC13826_0589 NC_009802.1 1182038 1182697 R identified by match to protein family HMM PF08238; Sel1 repeat-containing protein complement(1182038..1182697) Campylobacter concisus 13826 5595579 YP_001467023.1 CDS CCC13826_0588 NC_009802.1 1182708 1184048 R identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; type II secretion system protein E complement(1182708..1184048) Campylobacter concisus 13826 5595748 YP_001467024.1 CDS CCC13826_0587 NC_009802.1 1184045 1184362 R type II secretion system protein complement(1184045..1184362) Campylobacter concisus 13826 5597587 YP_001467025.1 CDS CCC13826_0586 NC_009802.1 1184352 1184471 R signal-transduction sensor protein complement(1184352..1184471) Campylobacter concisus 13826 5597187 YP_001467026.1 CDS CCC13826_0585 NC_009802.1 1184440 1184991 D identified by match to protein family HMM PF08238; methyl-accepting chemotaxis sensory transducer 1184440..1184991 Campylobacter concisus 13826 5595985 YP_001467027.1 CDS prfB NC_009802.1 1185013 1186113 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(1185013..1186113) Campylobacter concisus 13826 5596236 YP_001467028.1 CDS panC NC_009802.1 1186234 1187055 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1186234..1187055 Campylobacter concisus 13826 5595668 YP_001467029.1 CDS CCC13826_0582 NC_009802.1 1187058 1188368 D identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; hypothetical protein 1187058..1188368 Campylobacter concisus 13826 5595769 YP_001467030.1 CDS CCC13826_0581 NC_009802.1 1188365 1189357 D identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; ATP/GTP hydrolase 1188365..1189357 Campylobacter concisus 13826 5595743 YP_001467031.1 CDS CCC13826_0580 NC_009802.1 1189634 1189753 D ABC transporter ATP-binding protein 1189634..1189753 Campylobacter concisus 13826 5597382 YP_001467032.1 CDS CCC13826_0579 NC_009802.1 1190308 1190724 R identified by glimmer; hypothetical protein complement(1190308..1190724) Campylobacter concisus 13826 5596223 YP_001467033.1 CDS gmhA NC_009802.1 1190705 1191274 R identified by match to protein family HMM TIGR00441; phosphoheptose isomerase complement(1190705..1191274) Campylobacter concisus 13826 5595948 YP_001467034.1 CDS CCC13826_0577 NC_009802.1 1191249 1192667 R identified by match to protein family HMM PF00294; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02198; match to protein family HMM TIGR02199; UDP-N-acetylglucosamine--n-acetylmuramyl- (pentapeptide)pyrophosphoryl -undecaprenol n-acetylglucosamine transferase (undecaprenyl-PP-MurNAc-pentapeptide-UDPglcnac glcnactransferase) complement(1191249..1192667) Campylobacter concisus 13826 5597487 YP_001467035.1 CDS rfaD NC_009802.1 1192660 1193649 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR02197; ADP-glyceromanno-heptose 6-epimerase complement(1192660..1193649) Campylobacter concisus 13826 5597129 YP_001467036.1 CDS CCC13826_0575 NC_009802.1 1193646 1194161 R identified by match to protein family HMM TIGR00213; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; cell division complement(1193646..1194161) Campylobacter concisus 13826 5595812 YP_001467037.1 CDS CCC13826_0084 NC_009802.1 1194254 1194556 D identified by match to protein family HMM PF00034; glutamate racemase 2 1194254..1194556 Campylobacter concisus 13826 5596362 YP_001467038.1 CDS CCC13826_0083 NC_009802.1 1194695 1194889 R DedA family protein complement(1194695..1194889) Campylobacter concisus 13826 5597212 YP_001467039.1 CDS cysE NC_009802.1 1194921 1195472 R identified by match to protein family HMM TIGR01172; serine O-acetyltransferase complement(1194921..1195472) Campylobacter concisus 13826 5596956 YP_001467040.1 CDS cysK NC_009802.1 1195477 1196382 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A complement(1195477..1196382) Campylobacter concisus 13826 5595605 YP_001467041.1 CDS CCC13826_0080 NC_009802.1 1196476 1197144 R identified by match to protein family HMM PF00730; endonuclease III complement(1196476..1197144) Campylobacter concisus 13826 5596429 YP_001467042.1 CDS metN NC_009802.1 1197141 1197905 R identified by match to protein family HMM PF05673; D-methionine ABC transporter ATP-binding protein complement(1197141..1197905) Campylobacter concisus 13826 5596266 YP_001467043.1 CDS mfd NC_009802.1 1197902 1200847 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(1197902..1200847) Campylobacter concisus 13826 5596531 YP_001467044.1 CDS CCC13826_0077 NC_009802.1 1200828 1202030 R Valine--tRNA ligase; ValRS; identified by match to protein family HMM PF08245; match to protein family HMM TIGR01499; valyl-tRNA synthetase complement(1200828..1202030) Campylobacter concisus 13826 5597026 YP_001467045.1 CDS CCC13826_0076 NC_009802.1 1202027 1203601 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; GGDEF domain-containing protein complement(1202027..1203601) Campylobacter concisus 13826 5597190 YP_001467046.1 CDS CCC13826_0075 NC_009802.1 1203582 1204121 R penicillin-binding protein complement(1203582..1204121) Campylobacter concisus 13826 5597100 YP_001467047.1 CDS leuS NC_009802.1 1204125 1206590 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1204125..1206590) Campylobacter concisus 13826 5596212 YP_001467048.1 CDS CCC13826_0073 NC_009802.1 1206599 1206937 R MacA complement(1206599..1206937) Campylobacter concisus 13826 5596346 YP_001467049.1 CDS secF NC_009802.1 1206947 1207918 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(1206947..1207918) Campylobacter concisus 13826 5597496 YP_001467050.1 CDS secD NC_009802.1 1207921 1209453 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(1207921..1209453) Campylobacter concisus 13826 5596097 YP_001467051.1 CDS yajC NC_009802.1 1209501 1209773 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(1209501..1209773) Campylobacter concisus 13826 5595679 YP_001467052.1 CDS lnt NC_009802.1 1209878 1211041 D transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1209878..1211041 Campylobacter concisus 13826 5596000 YP_001467053.1 CDS metK NC_009802.1 1211084 1212289 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1211084..1212289) Campylobacter concisus 13826 5597522 YP_001467054.1 CDS CCC13826_0067 NC_009802.1 1212428 1213795 D involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 1212428..1213795 Campylobacter concisus 13826 5597609 YP_001467055.1 CDS CCC13826_0066 NC_009802.1 1213883 1215604 D identified by match to protein family HMM PF01432; match to protein family HMM PF08439; rhomboid family protein 1213883..1215604 Campylobacter concisus 13826 5596290 YP_001467056.1 CDS CCC13826_0065 NC_009802.1 1215606 1216055 D hypothetical protein 1215606..1216055 Campylobacter concisus 13826 5597421 YP_001467057.1 CDS CCC13826_0064 NC_009802.1 1216107 1218176 D identified by match to protein family HMM PF00580; enoylpyruvate transferase; UDP-N-acetylglucosamine enolpyruvyltransferase; EPT; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1216107..1218176 Campylobacter concisus 13826 5597108 YP_001467058.1 CDS truB NC_009802.1 1218173 1218994 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1218173..1218994 Campylobacter concisus 13826 5596125 YP_001467059.1 CDS csrA NC_009802.1 1218988 1219218 D identified by match to protein family HMM PF02599; match to protein family HMM TIGR00202; carbon storage regulator 1218988..1219218 Campylobacter concisus 13826 5597426 YP_001467060.1 CDS ispE NC_009802.1 1219215 1219958 D catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1219215..1219958 Campylobacter concisus 13826 5596556 YP_001467061.1 CDS smpB NC_009802.1 1219970 1220425 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1219970..1220425 Campylobacter concisus 13826 5596886 YP_001467062.1 CDS CCC13826_0059 NC_009802.1 1220434 1221030 D thioredoxin 1220434..1221030 Campylobacter concisus 13826 5597281 YP_001467063.1 CDS flgB NC_009802.1 1221093 1221527 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 1221093..1221527 Campylobacter concisus 13826 5597327 YP_001467064.1 CDS flgC NC_009802.1 1221536 1222036 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1221536..1222036 Campylobacter concisus 13826 5596936 YP_001467065.1 CDS fliE NC_009802.1 1222036 1222329 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1222036..1222329 Campylobacter concisus 13826 5596889 YP_001467066.1 CDS CCC13826_0055 NC_009802.1 1222338 1224170 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; hypothetical protein 1222338..1224170 Campylobacter concisus 13826 5597572 YP_001467067.1 CDS CCC13826_0054 NC_009802.1 1224259 1224720 R identified by glimmer; hypothetical protein complement(1224259..1224720) Campylobacter concisus 13826 5597345 YP_001467068.1 CDS hemH NC_009802.1 1224768 1225721 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(1224768..1225721) Campylobacter concisus 13826 5596353 YP_001467069.1 CDS CCC13826_0052 NC_009802.1 1225721 1226590 R thiazole biosynthesis protein ThiH complement(1225721..1226590) Campylobacter concisus 13826 5595714 YP_001467070.1 CDS alaS NC_009802.1 1226761 1229319 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1226761..1229319 Campylobacter concisus 13826 5597711 YP_001467071.1 CDS CCC13826_0050 NC_009802.1 1229316 1229813 D identified by glimmer; hypothetical protein 1229316..1229813 Campylobacter concisus 13826 5595941 YP_001467072.1 CDS CCC13826_0049 NC_009802.1 1229813 1230355 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1229813..1230355 Campylobacter concisus 13826 5597621 YP_001467073.1 CDS CCC13826_0048 NC_009802.1 1230352 1232280 D succinate dehydrogenase, iron-sulfur protein subunit 1230352..1232280 Campylobacter concisus 13826 5595593 YP_001467074.1 CDS CCC13826_0047 NC_009802.1 1232289 1232603 D hypothetical protein 1232289..1232603 Campylobacter concisus 13826 5597099 YP_001467075.1 CDS CCC13826_0046 NC_009802.1 1232676 1233251 D identified by glimmer; hypothetical protein 1232676..1233251 Campylobacter concisus 13826 5596140 YP_001467076.1 CDS CCC13826_0045 NC_009802.1 1233305 1234012 D identified by match to protein family HMM PF00884; iron(III) dicitrate-binding protein 1233305..1234012 Campylobacter concisus 13826 5596491 YP_001467077.1 CDS glyS NC_009802.1 1234296 1236314 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(1234296..1236314) Campylobacter concisus 13826 5595614 YP_001467078.1 CDS CCC13826_0042 NC_009802.1 1236311 1236466 R ribosomal RNA adenine dimethylase complement(1236311..1236466) Campylobacter concisus 13826 5595956 YP_001467079.1 CDS CCC13826_0041 NC_009802.1 1236467 1237849 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase complement(1236467..1237849) Campylobacter concisus 13826 5596035 YP_001467080.1 CDS CCC13826_0040 NC_009802.1 1237846 1238325 R identified by match to protein family HMM PF00588; RNA methyltransferase complement(1237846..1238325) Campylobacter concisus 13826 5596790 YP_001467081.1 CDS CCC13826_0039 NC_009802.1 1238400 1239572 R identified by match to protein family HMM PF01743; tRNA nucleotidyltransferase/poly(A) polymerase family protein complement(1238400..1239572) Campylobacter concisus 13826 5597638 YP_001467082.1 CDS CCC13826_0038 NC_009802.1 1239532 1239948 R OorC subunit of 2-oxoglutarate:acceptor oxidoreductase complement(1239532..1239948) Campylobacter concisus 13826 5597602 YP_001467083.1 CDS CCC13826_0037 NC_009802.1 1239945 1240190 R hypothetical protein complement(1239945..1240190) Campylobacter concisus 13826 5597380 YP_001467084.1 CDS leuB NC_009802.1 1240187 1241254 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1240187..1241254) Campylobacter concisus 13826 5597306 YP_001467085.1 CDS CCC13826_0035 NC_009802.1 1241264 1241749 R isopropylmalate isomerase; alpha-ipm isomerase; ipmi; identified by match to protein family HMM PF00694; match to protein family HMM TIGR02087; 3-isopropylmalate dehydratase small subunit complement(1241264..1241749) Campylobacter concisus 13826 5596201 YP_001467086.1 CDS CCC13826_0034 NC_009802.1 1242029 1242928 R hypothetical protein complement(1242029..1242928) Campylobacter concisus 13826 5595815 YP_001467087.1 CDS CCC13826_0033 NC_009802.1 1243033 1243926 R hypothetical protein complement(1243033..1243926) Campylobacter concisus 13826 5596931 YP_001467088.1 CDS CCC13826_0032 NC_009802.1 1243937 1244536 R identified by match to protein family HMM PF01810; LysE family translocator protein complement(1243937..1244536) Campylobacter concisus 13826 5595791 YP_001467089.1 CDS CCC13826_0031 NC_009802.1 1244586 1244720 D identified by glimmer; hypothetical protein 1244586..1244720 Campylobacter concisus 13826 5596985 YP_001467090.1 CDS CCC13826_0030 NC_009802.1 1244848 1245339 R hypothetical protein complement(1244848..1245339) Campylobacter concisus 13826 5596808 YP_001467091.1 CDS CCC13826_0029 NC_009802.1 1245423 1246439 R identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; L-asparaginase complement(1245423..1246439) Campylobacter concisus 13826 5596493 YP_001467092.1 CDS CCC13826_0028 NC_009802.1 1246555 1246890 R identified by match to protein family HMM PF05437; branched-chain amino acid transporter complement(1246555..1246890) Campylobacter concisus 13826 5597624 YP_001467093.1 CDS CCC13826_2180 NC_009802.1 1247699 1248658 D identified by match to protein family HMM PF00515; match to protein family HMM PF08238; Sel1 repeat-containing protein 1247699..1248658 Campylobacter concisus 13826 5596991 YP_001467094.1 CDS CCC13826_2181 NC_009802.1 1248668 1249108 D integral membrane protein 1248668..1249108 Campylobacter concisus 13826 5597266 YP_001467095.1 CDS CCC13826_2183 NC_009802.1 1249933 1250046 R HD/HDIG/KH domain-containing protein complement(1249933..1250046) Campylobacter concisus 13826 5595780 YP_001467096.1 CDS flgG NC_009802.1 1250052 1250840 R makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG complement(1250052..1250840) Campylobacter concisus 13826 5597367 YP_001467097.1 CDS CCC13826_2185 NC_009802.1 1250856 1251665 R identified by match to protein family HMM PF00460; flagellar basal-body rod protein complement(1250856..1251665) Campylobacter concisus 13826 5596586 YP_001467098.1 CDS CCC13826_2186 NC_009802.1 1251816 1253669 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 1251816..1253669 Campylobacter concisus 13826 5595681 YP_001467099.1 CDS CCC13826_2187 NC_009802.1 1254164 1255048 R hypothetical protein complement(1254164..1255048) Campylobacter concisus 13826 5596932 YP_001467100.1 CDS hisD NC_009802.1 1255058 1256350 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(1255058..1256350) Campylobacter concisus 13826 5596756 YP_001467101.1 CDS CCC13826_2073 NC_009802.1 1256347 1257198 R 1-aminocyclopropane-1-carboxylate deaminase complement(1256347..1257198) Campylobacter concisus 13826 5597366 YP_001467102.1 CDS CCC13826_2072 NC_009802.1 1257191 1258282 R identified by match to protein family HMM PF00691; chemotaxis protein MotB complement(1257191..1258282) Campylobacter concisus 13826 5597486 YP_001467103.1 CDS CCC13826_2071 NC_009802.1 1258279 1259592 R identified by glimmer; hypothetical protein complement(1258279..1259592) Campylobacter concisus 13826 5596231 YP_001467104.1 CDS fbaA NC_009802.1 1259597 1260661 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(1259597..1260661) Campylobacter concisus 13826 5596437 YP_001467105.1 CDS CCC13826_2069 NC_009802.1 1260677 1261495 R Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS; identified by match to protein family HMM PF00639; holo-[acyl-carrier-protein] synthase complement(1260677..1261495) Campylobacter concisus 13826 5595648 YP_001467106.1 CDS CCC13826_2066 NC_009802.1 1263565 1263822 R Periplasmic mercury ion-binding protein; Mercury scavenger protein; identified by match to protein family HMM PF00403; mercuric transporter periplasmic component complement(1263565..1263822) Campylobacter concisus 13826 5595782 YP_001467107.1 CDS CCC13826_2065 NC_009802.1 1263815 1264138 R identified by glimmer; hypothetical protein complement(1263815..1264138) Campylobacter concisus 13826 5595663 YP_001467108.1 CDS CCC13826_2064 NC_009802.1 1264135 1265214 R identified by match to protein family HMM PF01841; DNA-binding response regulator complement(1264135..1265214) Campylobacter concisus 13826 5596377 YP_001467109.1 CDS CCC13826_2063 NC_009802.1 1265306 1265473 D hypothetical protein 1265306..1265473 Campylobacter concisus 13826 5596937 YP_001467110.1 CDS CCC13826_2062 NC_009802.1 1265475 1266344 D identified by match to protein family HMM PF08003; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 1265475..1266344 Campylobacter concisus 13826 5597163 YP_001467111.1 CDS CCC13826_2061 NC_009802.1 1266353 1266892 D thioesterase 1266353..1266892 Campylobacter concisus 13826 5596728 YP_001467112.1 CDS CCC13826_2060 NC_009802.1 1267089 1268351 D identified by match to protein family HMM PF05538; outer membrane protein 1267089..1268351 Campylobacter concisus 13826 5595712 YP_001467113.1 CDS rbn NC_009802.1 1268465 1268896 D tRNA-processing ribonuclease BN 1268465..1268896 Campylobacter concisus 13826 5597341 YP_001467114.1 CDS CCC13826_2057 NC_009802.1 1268851 1268967 D identified by glimmer; hypothetical protein 1268851..1268967 Campylobacter concisus 13826 5596286 YP_001467115.1 CDS CCC13826_2058 NC_009802.1 1268950 1269759 R identified by match to protein family HMM PF03976; polyphosphate kinase 2 superfamily protein complement(1268950..1269759) Campylobacter concisus 13826 5596342 YP_001467116.1 CDS CCC13826_2056 NC_009802.1 1269867 1271594 D identified by match to protein family HMM PF00085; match to protein family HMM PF02683; divalent cation transporter 1269867..1271594 Campylobacter concisus 13826 5596375 YP_001467117.1 CDS CCC13826_2055 NC_009802.1 1271697 1271852 R identified by glimmer; hypothetical protein complement(1271697..1271852) Campylobacter concisus 13826 5596038 YP_001467118.1 CDS CCC13826_2054 NC_009802.1 1272146 1272262 R hypothetical protein complement(1272146..1272262) Campylobacter concisus 13826 5596083 YP_001467119.1 CDS kdsB NC_009802.1 1272259 1272969 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(1272259..1272969) Campylobacter concisus 13826 5596611 YP_001467120.1 CDS thrC NC_009802.1 1272966 1274429 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(1272966..1274429) Campylobacter concisus 13826 5597243 YP_001467121.1 CDS CCC13826_2049 NC_009802.1 1275704 1276834 R identified by match to protein family HMM PF01041; DegT/DnrJ/EryC1/StrS aminotransferase family protein complement(1275704..1276834) Campylobacter concisus 13826 5597488 YP_001467122.1 CDS dnaQ NC_009802.1 1277703 1278305 D identified by match to protein family HMM PF00753; DNA polymerase III subunit epsilon 1277703..1278305 Campylobacter concisus 13826 5596750 YP_001467123.1 CDS dnaK NC_009802.1 1278454 1280325 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1278454..1280325) Campylobacter concisus 13826 5597167 YP_001467124.1 CDS grpE NC_009802.1 1280357 1280899 R identified by match to protein family HMM PF01025; co-chaperone GrpE complement(1280357..1280899) Campylobacter concisus 13826 5596334 YP_001467125.1 CDS CCC13826_2044 NC_009802.1 1280896 1281699 R Acts as a negative regulator of the grpE-dnaK-dnaJ and groELS class I heat shock operons by preventing heat-shock induction; heat-inducible transcription repressor complement(1280896..1281699) Campylobacter concisus 13826 5596730 YP_001467126.1 CDS CCC13826_2043 NC_009802.1 1282059 1282304 D hypothetical protein 1282059..1282304 Campylobacter concisus 13826 5596143 YP_001467127.1 CDS CCC13826_2042 NC_009802.1 1282305 1282484 D identified by glimmer; hypothetical protein 1282305..1282484 Campylobacter concisus 13826 5595763 YP_001467128.1 CDS CCC13826_2041 NC_009802.1 1282725 1283051 D aminoacyl-histidine dipeptidase 1282725..1283051 Campylobacter concisus 13826 5597077 YP_001467129.1 CDS CCC13826_2040 NC_009802.1 1283140 1284417 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00857; chaperone protein HtpG (heat shock protein htpG; high temperatureprotein G) complement(1283140..1284417) Campylobacter concisus 13826 5595853 YP_001467130.1 CDS pyrB NC_009802.1 1284420 1285349 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(1284420..1285349) Campylobacter concisus 13826 5596042 YP_001467131.1 CDS mog NC_009802.1 1285367 1285777 R identified by match to protein family HMM PF08238; molybdopterin biosynthesis protein complement(1285367..1285777) Campylobacter concisus 13826 5595879 YP_001467132.1 CDS ftsH NC_009802.1 1285787 1286014 R cell division protein complement(1285787..1286014) Campylobacter concisus 13826 5596553 YP_001467133.1 CDS CCC13826_2036 NC_009802.1 1286011 1287036 R identified by glimmer; hypothetical protein complement(1286011..1287036) Campylobacter concisus 13826 5597440 YP_001467134.1 CDS flhA NC_009802.1 1287046 1289241 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(1287046..1289241) Campylobacter concisus 13826 5596758 YP_001467135.1 CDS CCC13826_2034 NC_009802.1 1289244 1289648 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein ( transcriptional regulator) complement(1289244..1289648) Campylobacter concisus 13826 5597131 YP_001467136.1 CDS rpsO NC_009802.1 1289795 1290067 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1289795..1290067 Campylobacter concisus 13826 5596409 YP_001467137.1 CDS CCC13826_2032 NC_009802.1 1290428 1290850 D identified by match to protein family HMM PF04879; molybdopterin oxidoreductase Fe4S4 subunit 1290428..1290850 Campylobacter concisus 13826 5597185 YP_001467138.1 CDS CCC13826_2031 NC_009802.1 1290947 1292704 D identified by match to protein family HMM PF00384; match to protein family HMM PF01568; Myb2 protein 1290947..1292704 Campylobacter concisus 13826 5595992 YP_001467139.1 CDS CCC13826_2030 NC_009802.1 1292732 1293925 R hypothetical protein complement(1292732..1293925) Campylobacter concisus 13826 5597464 YP_001467140.1 CDS CCC13826_2029 NC_009802.1 1293946 1294656 R identified by glimmer; hypothetical protein complement(1293946..1294656) Campylobacter concisus 13826 5595890 YP_001467141.1 CDS CCC13826_2028 NC_009802.1 1294669 1295586 R identified by glimmer; hypothetical protein complement(1294669..1295586) Campylobacter concisus 13826 5596478 YP_001467142.1 CDS CCC13826_2027 NC_009802.1 1295596 1296237 R pTet43 complement(1295596..1296237) Campylobacter concisus 13826 5597377 YP_001467143.1 CDS CCC13826_2026 NC_009802.1 1296328 1297032 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR00740; methyltransferase complement(1296328..1297032) Campylobacter concisus 13826 5596726 YP_001467144.1 CDS ribF NC_009802.1 1297029 1297922 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(1297029..1297922) Campylobacter concisus 13826 5597029 YP_001467145.1 CDS rrmJ NC_009802.1 1297888 1298601 R identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; ribosomal RNA large subunit methyltransferase J complement(1297888..1298601) Campylobacter concisus 13826 5597067 YP_001467146.1 CDS ligA NC_009802.1 1298591 1300534 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(1298591..1300534) Campylobacter concisus 13826 5597617 YP_001467147.1 CDS CCC13826_2022 NC_009802.1 1300576 1301436 R identified by match to protein family HMM PF08719; match to protein family HMM TIGR02464; hypothetical protein complement(1300576..1301436) Campylobacter concisus 13826 5596675 YP_001467148.1 CDS CCC13826_2021 NC_009802.1 1301460 1302599 R identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase complement(1301460..1302599) Campylobacter concisus 13826 5596004 YP_001467149.1 CDS CCC13826_2020 NC_009802.1 1302596 1303216 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the subunit beta on the DNA; DNA polymerase III subunit delta' complement(1302596..1303216) Campylobacter concisus 13826 5596921 YP_001467150.1 CDS CCC13826_2019 NC_009802.1 1303217 1303756 R hypothetical protein complement(1303217..1303756) Campylobacter concisus 13826 5596099 YP_001467151.1 CDS CCC13826_2018 NC_009802.1 1303756 1304955 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(1303756..1304955) Campylobacter concisus 13826 5597174 YP_001467152.1 CDS CCC13826_2017 NC_009802.1 1304955 1305419 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(1304955..1305419) Campylobacter concisus 13826 5596033 YP_001467153.1 CDS CCC13826_2016 NC_009802.1 1305483 1306574 R identified by match to protein family HMM PF03929; PepSY-associated TM helix family protein complement(1305483..1306574) Campylobacter concisus 13826 5597523 YP_001467154.1 CDS CCC13826_2012 NC_009802.1 1310582 1310719 R metal-sulfur cluster biosynthetic enzyme complement(1310582..1310719) Campylobacter concisus 13826 5597659 YP_001467155.1 CDS CCC13826_2010 NC_009802.1 1310685 1311083 D identified by match to protein family HMM PF02416; match to protein family HMM TIGR01410; sec-independent translocase 1310685..1311083 Campylobacter concisus 13826 5597221 YP_001467156.1 CDS CCC13826_2006 NC_009802.1 1312868 1313662 D hypothetical protein 1312868..1313662 Campylobacter concisus 13826 5596830 YP_001467157.1 CDS dprA NC_009802.1 1314037 1314807 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA complement(1314037..1314807) Campylobacter concisus 13826 5596840 YP_001467158.1 CDS CCC13826_2004 NC_009802.1 1314804 1316255 R identified by match to protein family HMM PF04748; ferric-uptake regulator complement(1314804..1316255) Campylobacter concisus 13826 5595606 YP_001467159.1 CDS ilvC NC_009802.1 1316259 1317281 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(1316259..1317281) Campylobacter concisus 13826 5596832 YP_001467160.1 CDS CCC13826_2002 NC_009802.1 1317293 1317436 D hypothetical protein 1317293..1317436 Campylobacter concisus 13826 5597437 YP_001467161.1 CDS CCC13826_2001 NC_009802.1 1317429 1318247 D identified by match to protein family HMM PF08668; HDOD domain-contain protein 1317429..1318247 Campylobacter concisus 13826 5596786 YP_001467162.1 CDS CCC13826_2000 NC_009802.1 1318244 1320163 D identified by match to protein family HMM PF00773; hypothetical protein 1318244..1320163 Campylobacter concisus 13826 5595760 YP_001467163.1 CDS CCC13826_1999 NC_009802.1 1320156 1321154 D required for the assembly and function of the DNAX complex which is required for the assembly of the subunit beta onto primed DNA; DNA polymerase III subunit delta 1320156..1321154 Campylobacter concisus 13826 5597140 YP_001467164.1 CDS rpsF NC_009802.1 1321232 1321651 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1321232..1321651 Campylobacter concisus 13826 5595711 YP_001467165.1 CDS CCC13826_1997 NC_009802.1 1321665 1322192 D identified by match to protein family HMM PF00436; match to protein family HMM PF01336; match to protein family HMM TIGR00621; amino acid carrier protein AlsT 1321665..1322192 Campylobacter concisus 13826 5597708 YP_001467166.1 CDS rpsR NC_009802.1 1322209 1322469 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1322209..1322469 Campylobacter concisus 13826 5595604 YP_001467167.1 CDS mrdA NC_009802.1 1322694 1324517 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423; penicillin-binding protein 2 complement(1322694..1324517) Campylobacter concisus 13826 5595988 YP_001467168.1 CDS CCC13826_1994 NC_009802.1 1324514 1325005 R hypothetical protein complement(1324514..1325005) Campylobacter concisus 13826 5595990 YP_001467169.1 CDS engB NC_009802.1 1325007 1325621 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(1325007..1325621) Campylobacter concisus 13826 5596091 YP_001467170.1 CDS yhbN NC_009802.1 1325618 1326094 R identified by match to protein family HMM PF03968; match to protein family HMM TIGR03002; cell envelope biogenesis protein YhbN complement(1325618..1326094) Campylobacter concisus 13826 5596137 YP_001467171.1 CDS CCC13826_1991 NC_009802.1 1326067 1326594 R identified by match to protein family HMM PF06835; hypothetical protein complement(1326067..1326594) Campylobacter concisus 13826 5595899 YP_001467172.1 CDS CCC13826_1990 NC_009802.1 1326585 1327073 R identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(1326585..1327073) Campylobacter concisus 13826 5597222 YP_001467173.1 CDS hisB NC_009802.1 1327070 1327657 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(1327070..1327657) Campylobacter concisus 13826 5596312 YP_001467174.1 CDS CCC13826_1988 NC_009802.1 1327661 1328521 R identified by match to protein family HMM PF03330; match to protein family HMM PF05036; match to protein family HMM TIGR00413; drug/metabolite exporter (DME) family protein complement(1327661..1328521) Campylobacter concisus 13826 5596727 YP_001467175.1 CDS CCC13826_1987 NC_009802.1 1328508 1329719 R identified by match to protein family HMM PF01464; match to protein family HMM PF01476; Dyp-type peroxidase complement(1328508..1329719) Campylobacter concisus 13826 5597357 YP_001467176.1 CDS CCC13826_1986 NC_009802.1 1329703 1329816 R identified by glimmer; hypothetical protein complement(1329703..1329816) Campylobacter concisus 13826 5596289 YP_001467177.1 CDS CCC13826_1985 NC_009802.1 1329785 1330546 R identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; glyoxalase II complement(1329785..1330546) Campylobacter concisus 13826 5597564 YP_001467178.1 CDS CCC13826_1984 NC_009802.1 1330567 1331823 R identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254; threonine dehydratase complement(1330567..1331823) Campylobacter concisus 13826 5597017 YP_001467179.1 CDS CCC13826_1983 NC_009802.1 1331912 1333417 R identified by match to protein family HMM PF02463; tRNA (uracil-5-)-methyltransferase complement(1331912..1333417) Campylobacter concisus 13826 5596998 YP_001467180.1 CDS pnk NC_009802.1 1333425 1334300 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(1333425..1334300) Campylobacter concisus 13826 5596302 YP_001467181.1 CDS aspS NC_009802.1 1334393 1336150 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1334393..1336150 Campylobacter concisus 13826 5595740 YP_001467182.1 CDS adk NC_009802.1 1336334 1336903 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1336334..1336903 Campylobacter concisus 13826 5595914 YP_001467183.1 CDS CCC13826_1979 NC_009802.1 1337010 1337348 D identified by match to protein family HMM PF04076; protein YgiW 1337010..1337348 Campylobacter concisus 13826 5595794 YP_001467184.1 CDS ppa NC_009802.1 1337418 1337936 D identified by match to protein family HMM PF00719; inorganic diphosphatase 1337418..1337936 Campylobacter concisus 13826 5595738 YP_001467185.1 CDS prrB NC_009802.1 1338255 1341932 R identified by match to protein family HMM PF02395; match to protein family HMM PF03797; match to protein family HMM TIGR01414; anti-codon nuclease masking agent complement(1338255..1341932) Campylobacter concisus 13826 5596404 YP_001467186.1 CDS hsdM NC_009802.1 1342258 1343118 D identified by match to protein family HMM TIGR01409; type I restriction-modification system, M subunit 1342258..1343118 Campylobacter concisus 13826 5596660 YP_001467187.1 CDS CCC13826_1973 NC_009802.1 1343111 1343923 D identified by match to protein family HMM PF00037; riboflavin biosynthesis protein ribAB 1343111..1343923 Campylobacter concisus 13826 5596717 YP_001467188.1 CDS CCC13826_1972 NC_009802.1 1343923 1344750 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1343923..1344750 Campylobacter concisus 13826 5596819 YP_001467189.1 CDS CCC13826_1971 NC_009802.1 1344794 1344910 D identified by glimmer; hypothetical protein 1344794..1344910 Campylobacter concisus 13826 5596562 YP_001467190.1 CDS CCC13826_1970 NC_009802.1 1345172 1346521 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; hypothetical protein complement(1345172..1346521) Campylobacter concisus 13826 5596425 YP_001467191.1 CDS CCC13826_1969 NC_009802.1 1346505 1347164 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein complement(1346505..1347164) Campylobacter concisus 13826 5596573 YP_001467192.1 CDS CCC13826_1968 NC_009802.1 1347206 1347874 R hypothetical protein complement(1347206..1347874) Campylobacter concisus 13826 5595762 YP_001467193.1 CDS CCC13826_1967 NC_009802.1 1347919 1348404 R identified by match to protein family HMM PF03413; peptidase propeptide/YPEB domain-containing protein complement(1347919..1348404) Campylobacter concisus 13826 5597499 YP_001467194.1 CDS CCC13826_1965 NC_009802.1 1348859 1349386 R identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; CRISPR-associated protein Cas2 complement(1348859..1349386) Campylobacter concisus 13826 5596721 YP_001467195.1 CDS CCC13826_1964 NC_009802.1 1349467 1349901 R hypothetical protein complement(1349467..1349901) Campylobacter concisus 13826 5597524 YP_001467196.1 CDS CCC13826_1963 NC_009802.1 1349901 1350842 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; prepilin-type N-terminal cleavage/methylation domain-containing protein complement(1349901..1350842) Campylobacter concisus 13826 5595828 YP_001467197.1 CDS CCC13826_1962 NC_009802.1 1350839 1351483 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; prepilin-type N- terminal cleavage/methylation domain-containing protein complement(1350839..1351483) Campylobacter concisus 13826 5597149 YP_001467198.1 CDS CCC13826_1961 NC_009802.1 1351477 1355691 R hypothetical protein complement(1351477..1355691) Campylobacter concisus 13826 5596849 YP_001467199.1 CDS CCC13826_1960 NC_009802.1 1355745 1356128 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(1355745..1356128) Campylobacter concisus 13826 5596572 YP_001467200.1 CDS CCC13826_1959 NC_009802.1 1356241 1356888 D M1G-methyltransferase; tRNA [GM37] methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 1356241..1356888 Campylobacter concisus 13826 5596248 YP_001467201.1 CDS lon NC_009802.1 1356897 1359314 D identified by match to protein family HMM PF00004; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La 1356897..1359314 Campylobacter concisus 13826 5596831 YP_001467202.1 CDS CCC13826_1957 NC_009802.1 1359859 1361823 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(1359859..1361823) Campylobacter concisus 13826 5597525 YP_001467203.1 CDS CCC13826_1956 NC_009802.1 1361972 1362790 R identified by match to protein family HMM PF08543; phosphomethylpyrimidine kinase complement(1361972..1362790) Campylobacter concisus 13826 5596017 YP_001467204.1 CDS ffh NC_009802.1 1362794 1363708 R identified by match to protein family HMM PF04055; signal recognition particle protein complement(1362794..1363708) Campylobacter concisus 13826 5596705 YP_001467205.1 CDS hemE NC_009802.1 1363698 1364720 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(1363698..1364720) Campylobacter concisus 13826 5597090 YP_001467206.1 CDS CCC13826_1014 NC_009802.1 1364813 1365319 R identified by match to protein family HMM PF03350; hypothetical protein complement(1364813..1365319) Campylobacter concisus 13826 5596962 YP_001467207.1 CDS CCC13826_1015 NC_009802.1 1365705 1366634 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1365705..1366634) Campylobacter concisus 13826 5595775 YP_001467208.1 CDS CCC13826_1017 NC_009802.1 1366808 1367170 D identified by match to protein family HMM PF04343; glycyl-tRNA synthetase subunit alpha 1366808..1367170 Campylobacter concisus 13826 5596027 YP_001467209.1 CDS mnmA NC_009802.1 1367157 1368179 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase complement(1367157..1368179) Campylobacter concisus 13826 5596133 YP_001467210.1 CDS CCC13826_1018 NC_009802.1 1368226 1368816 R identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein complement(1368226..1368816) Campylobacter concisus 13826 5596536 YP_001467211.1 CDS CCC13826_1019 NC_009802.1 1368816 1369670 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliY complement(1368816..1369670) Campylobacter concisus 13826 5596543 YP_001467212.1 CDS fliM NC_009802.1 1369660 1370763 R with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM complement(1369660..1370763) Campylobacter concisus 13826 5595739 YP_001467213.1 CDS fliA NC_009802.1 1370763 1371467 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(1370763..1371467) Campylobacter concisus 13826 5597647 YP_001467214.1 CDS CCC13826_1022 NC_009802.1 1371439 1371783 R hypothetical protein complement(1371439..1371783) Campylobacter concisus 13826 5595595 YP_001467215.1 CDS CCC13826_0366 NC_009802.1 1371797 1372663 R identified by match to protein family HMM PF01656; histidinol phosphatase complement(1371797..1372663) Campylobacter concisus 13826 5596197 YP_001467216.1 CDS flhF NC_009802.1 1372656 1374014 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(1372656..1374014) Campylobacter concisus 13826 5595804 YP_001467217.1 CDS folK NC_009802.1 1374024 1374500 R identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(1374024..1374500) Campylobacter concisus 13826 5595652 YP_001467218.1 CDS dnaX NC_009802.1 1374497 1375522 R identified by match to protein family HMM PF00557; DNA polymerase III gamma and tau subunits complement(1374497..1375522) Campylobacter concisus 13826 5596997 YP_001467219.1 CDS aroQ NC_009802.1 1375519 1375998 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(1375519..1375998) Campylobacter concisus 13826 5596465 YP_001467220.1 CDS CCC13826_0371 NC_009802.1 1376083 1377300 D Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase 1376083..1377300 Campylobacter concisus 13826 5596802 YP_001467221.1 CDS sppA NC_009802.1 1377288 1378151 D identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 36K type 1377288..1378151 Campylobacter concisus 13826 5596687 YP_001467222.1 CDS psp NC_009802.1 1378204 1378443 R ribonuclease, PSP-type complement(1378204..1378443) Campylobacter concisus 13826 5596464 YP_001467223.1 CDS CCC13826_0377 NC_009802.1 1379435 1379839 R identified by glimmer; hypothetical protein complement(1379435..1379839) Campylobacter concisus 13826 5596119 YP_001467224.1 CDS panB NC_009802.1 1379925 1380740 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1379925..1380740 Campylobacter concisus 13826 5596919 YP_001467225.1 CDS CCC13826_0380 NC_009802.1 1381707 1382078 R identified by match to protein family HMM PF01230; HIT family protein complement(1381707..1382078) Campylobacter concisus 13826 5595750 YP_001467226.1 CDS CCC13826_0381 NC_009802.1 1382093 1383133 R identified by match to protein family HMM PF01594; hypothetical protein complement(1382093..1383133) Campylobacter concisus 13826 5597071 YP_001467227.1 CDS CCC13826_0382 NC_009802.1 1383189 1383323 D major outer membrane protein 1383189..1383323 Campylobacter concisus 13826 5596110 YP_001467228.1 CDS CCC13826_0383 NC_009802.1 1383334 1384413 R cytochrome C family protein complement(1383334..1384413) Campylobacter concisus 13826 5597441 YP_001467229.1 CDS ruvB NC_009802.1 1384437 1385447 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(1384437..1385447) Campylobacter concisus 13826 5596566 YP_001467230.1 CDS CCC13826_0385 NC_009802.1 1385497 1386603 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; two-component sensor complement(1385497..1386603) Campylobacter concisus 13826 5595761 YP_001467231.1 CDS CCC13826_0386 NC_009802.1 1386587 1387255 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; two component transcriptional regulator complement(1386587..1387255) Campylobacter concisus 13826 5596853 YP_001467232.1 CDS CCC13826_0387 NC_009802.1 1387346 1388281 R identified by match to protein family HMM PF03916; phosphatidylglycerophosphatase A complement(1387346..1388281) Campylobacter concisus 13826 5597428 YP_001467233.1 CDS CCC13826_0388 NC_009802.1 1388274 1388837 R identified by match to protein family HMM PF00037; anaerobic dimethyl sulfoxide reductase chain B complement(1388274..1388837) Campylobacter concisus 13826 5596314 YP_001467234.1 CDS CCC13826_0389 NC_009802.1 1388847 1391120 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; response regulator receiver domain-containing protein complement(1388847..1391120) Campylobacter concisus 13826 5597388 YP_001467235.1 CDS CCC13826_0390 NC_009802.1 1391414 1392757 R identified by match to protein family HMM PF03605; match to protein family HMM TIGR00770; IspD/IspF bifunctional enzyme complement(1391414..1392757) Campylobacter concisus 13826 5596568 YP_001467236.1 CDS CCC13826_0391 NC_009802.1 1392849 1394249 R identified by match to protein family HMM PF00206; thiamine biosynthesis protein ThiC complement(1392849..1394249) Campylobacter concisus 13826 5597565 YP_001467237.1 CDS mpr NC_009802.1 1394758 1395531 R identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; ATP-binding protein complement(1394758..1395531) Campylobacter concisus 13826 5597002 YP_001467238.1 CDS expD NC_009802.1 1395569 1395952 R identified by match to protein family HMM PF02472; match to protein family HMM TIGR02804; TonB system transporter ExbD complement(1395569..1395952) Campylobacter concisus 13826 5597465 YP_001467239.1 CDS exbB NC_009802.1 1395939 1396367 R identified by match to protein family HMM PF01618; match to protein family HMM TIGR02805; TonB-system energizer ExbB complement(1395939..1396367) Campylobacter concisus 13826 5596427 YP_001467240.1 CDS CCC13826_0395 NC_009802.1 1396587 1397243 R hypothetical protein complement(1396587..1397243) Campylobacter concisus 13826 5597170 YP_001467241.1 CDS CCC13826_0396 NC_009802.1 1397243 1398229 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1397243..1398229) Campylobacter concisus 13826 5596571 YP_001467242.1 CDS CCC13826_0397 NC_009802.1 1398226 1399059 R identified by match to protein family HMM PF03008; ATPase complement(1398226..1399059) Campylobacter concisus 13826 5596146 YP_001467243.1 CDS dapD NC_009802.1 1399170 1400498 D identified by match to protein family HMM PF00266; tetrahydrodipicolinate N-succinyltransferase 1399170..1400498 Campylobacter concisus 13826 5597307 YP_001467244.1 CDS thiD NC_009802.1 1400479 1401243 D identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 1400479..1401243 Campylobacter concisus 13826 5596549 YP_001467245.1 CDS thiE NC_009802.1 1401236 1401850 D identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate pyrophosphorylase 1401236..1401850 Campylobacter concisus 13826 5596267 YP_001467246.1 CDS CCC13826_0401 NC_009802.1 1402097 1402867 D identified by glimmer; hypothetical protein 1402097..1402867 Campylobacter concisus 13826 5595840 YP_001467247.1 CDS CCC13826_0402 NC_009802.1 1402980 1403120 R identified by glimmer; hypothetical protein complement(1402980..1403120) Campylobacter concisus 13826 5597386 YP_001467248.1 CDS CCC13826_0403 NC_009802.1 1403135 1405216 D identified by match to protein family HMM PF00350; dynamin family protein 1403135..1405216 Campylobacter concisus 13826 5597258 YP_001467249.1 CDS glmS NC_009802.1 1405209 1407041 D identified by match to protein family HMM PF00350; glucosamine fructose-6-phosphate aminotransferase (isomerizing) 1405209..1407041 Campylobacter concisus 13826 5596330 YP_001467250.1 CDS CCC13826_0405 NC_009802.1 1407249 1408355 R identified by match to protein family HMM PF01168; GlnD family protein complement(1407249..1408355) Campylobacter concisus 13826 5595706 YP_001467251.1 CDS CCC13826_0406 NC_009802.1 1408443 1410896 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; radical SAM domain-containing protein complement(1408443..1410896) Campylobacter concisus 13826 5596423 YP_001467252.1 CDS CCC13826_0407 NC_009802.1 1411051 1411344 D identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase 1411051..1411344 Campylobacter concisus 13826 5597098 YP_001467253.1 CDS CCC13826_0408 NC_009802.1 1411377 1411598 D nucleotide phosphoribosyltransferase 1411377..1411598 Campylobacter concisus 13826 5596046 YP_001467254.1 CDS CCC13826_0409 NC_009802.1 1411649 1412551 D hypothetical protein 1411649..1412551 Campylobacter concisus 13826 5596748 YP_001467255.1 CDS CCC13826_0410 NC_009802.1 1412868 1415606 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; N- methylation complement(1412868..1415606) Campylobacter concisus 13826 5596005 YP_001467256.1 CDS CCC13826_0411 NC_009802.1 1415707 1416423 R UDP-3-O-acyl-GlcNAc deacetylase; identified by match to protein family HMM PF00497; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(1415707..1416423) Campylobacter concisus 13826 5595872 YP_001467257.1 CDS CCC13826_0413 NC_009802.1 1418818 1419588 R identified by match to protein family HMM PF00497; homoserine kinase (HSK; HK) complement(1418818..1419588) Campylobacter concisus 13826 5595601 YP_001467258.1 CDS CCC13826_0414 NC_009802.1 1419600 1420328 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1419600..1420328) Campylobacter concisus 13826 5596415 YP_001467259.1 CDS CCC13826_0415 NC_009802.1 1420321 1421031 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine amino acid ABC transporter permease complement(1420321..1421031) Campylobacter concisus 13826 5596980 YP_001467260.1 CDS putP NC_009802.1 1421180 1422667 D identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02121; sodium/proline symporter 1421180..1422667 Campylobacter concisus 13826 5597360 YP_001467261.1 CDS CCC13826_0417 NC_009802.1 1422716 1423720 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(1422716..1423720) Campylobacter concisus 13826 5595939 YP_001467262.1 CDS CCC13826_0418 NC_009802.1 1423717 1425015 R hypothetical protein complement(1423717..1425015) Campylobacter concisus 13826 5596199 YP_001467263.1 CDS CCC13826_0419 NC_009802.1 1425015 1426250 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; permease subfamily protein complement(1425015..1426250) Campylobacter concisus 13826 5597115 YP_001467264.1 CDS dxr NC_009802.1 1426237 1427346 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1426237..1427346) Campylobacter concisus 13826 5596927 YP_001467265.1 CDS cdsA NC_009802.1 1427328 1428059 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(1427328..1428059) Campylobacter concisus 13826 5596590 YP_001467266.1 CDS CCC13826_0422 NC_009802.1 1428235 1428621 R identified by match to protein family HMM PF04471; sodium- and chloride-dependent transporter complement(1428235..1428621) Campylobacter concisus 13826 5597205 YP_001467267.1 CDS CCC13826_0423 NC_009802.1 1428684 1428935 D transmembrane transporter 1428684..1428935 Campylobacter concisus 13826 5595860 YP_001467268.1 CDS frdB NC_009802.1 1428962 1429681 R part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit complement(1428962..1429681) Campylobacter concisus 13826 5596069 YP_001467269.1 CDS CCC13826_0425 NC_009802.1 1429674 1431692 R part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit complement(1429674..1431692) Campylobacter concisus 13826 5597053 YP_001467270.1 CDS CCC13826_0426 NC_009802.1 1431707 1432279 R identified by match to protein family HMM PF02967; fumarate reductase respiratory complex, transmembrane subunit complement(1431707..1432279) Campylobacter concisus 13826 5597344 YP_001467271.1 CDS lgt NC_009802.1 1432525 1433340 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(1432525..1433340) Campylobacter concisus 13826 5597574 YP_001467272.1 CDS CCC13826_0428 NC_009802.1 1433377 1434012 R pepcarboxykinase; phosphoenolpyruvate carboxylase; pepck; identified by match to protein family HMM PF01205; phosphoenolpyruvate carboxykinase (ATP) complement(1433377..1434012) Campylobacter concisus 13826 5595659 YP_001467273.1 CDS galU NC_009802.1 1434139 1434960 D identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase 1434139..1434960 Campylobacter concisus 13826 5596913 YP_001467274.1 CDS pgi NC_009802.1 1434957 1436177 D catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase 1434957..1436177 Campylobacter concisus 13826 5597050 YP_001467275.1 CDS CCC13826_0431 NC_009802.1 1436181 1436726 D identified by match to protein family HMM PF06940; aerobic C4-dicarboxylate transporter 1436181..1436726 Campylobacter concisus 13826 5595940 YP_001467276.1 CDS CCC13826_0432 NC_009802.1 1436787 1438376 D identified by match to protein family HMM PF00005; peptidyl-prolyl cis-trans isomerase B (PPIase B; rotamase B) 1436787..1438376 Campylobacter concisus 13826 5597542 YP_001467277.1 CDS CCC13826_0433 NC_009802.1 1438581 1439258 R hypothetical protein complement(1438581..1439258) Campylobacter concisus 13826 5596228 YP_001467278.1 CDS CCC13826_0434 NC_009802.1 1439298 1440644 R identified by match to protein family HMM PF01266; match to protein family HMM PF06039; acetyltransferase complement(1439298..1440644) Campylobacter concisus 13826 5596950 YP_001467279.1 CDS CCC13826_0435 NC_009802.1 1440773 1442779 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; heavy metal transport/detoxification protein complement(1440773..1442779) Campylobacter concisus 13826 5596495 YP_001467280.1 CDS leuA NC_009802.1 1444748 1446262 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(1444748..1446262) Campylobacter concisus 13826 5596672 YP_001467281.1 CDS CCC13826_0439 NC_009802.1 1446403 1447134 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; argininosuccinate lyase (arginosuccinase; asal) complement(1446403..1447134) Campylobacter concisus 13826 5595670 YP_001467282.1 CDS psd NC_009802.1 1447136 1447753 R identified by match to protein family HMM PF02666; phosphatidylserine decarboxylase complement(1447136..1447753) Campylobacter concisus 13826 5595612 YP_001467283.1 CDS CCC13826_0441 NC_009802.1 1447756 1449681 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; cell division protease FtsH-like protein complement(1447756..1449681) Campylobacter concisus 13826 5596090 YP_001467284.1 CDS prmA NC_009802.1 1449674 1450507 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(1449674..1450507) Campylobacter concisus 13826 5596411 YP_001467285.1 CDS CCC13826_0443 NC_009802.1 1450507 1450872 R identified by match to protein family HMM PF00072; lipoprotein complement(1450507..1450872) Campylobacter concisus 13826 5597248 YP_001467286.1 CDS hisA NC_009802.1 1450936 1451646 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(1450936..1451646) Campylobacter concisus 13826 5597177 YP_001467287.1 CDS hisH NC_009802.1 1451646 1452257 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(1451646..1452257) Campylobacter concisus 13826 5596588 YP_001467288.1 CDS CCC13826_0446 NC_009802.1 1452254 1453150 R identified by glimmer; hypothetical protein complement(1452254..1453150) Campylobacter concisus 13826 5596683 YP_001467289.1 CDS CCC13826_0447 NC_009802.1 1453153 1454934 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; FO synthase subunit 2 (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2) complement(1453153..1454934) Campylobacter concisus 13826 5597293 YP_001467290.1 CDS CCC13826_0448 NC_009802.1 1454935 1456026 R identified by match to protein family HMM PF01041; match to protein family HMM PF01212; processing protease complement(1454935..1456026) Campylobacter concisus 13826 5596661 YP_001467291.1 CDS CCC13826_0449 NC_009802.1 1456076 1456666 R identified by match to protein family HMM PF00132; general glycosylation pathway protein complement(1456076..1456666) Campylobacter concisus 13826 5597450 YP_001467292.1 CDS CCC13826_0450 NC_009802.1 1456653 1457258 R identified by match to protein family HMM PF02397; Cpp29 complement(1456653..1457258) Campylobacter concisus 13826 5595610 YP_001467293.1 CDS CCC13826_0451 NC_009802.1 1457251 1458366 R identified by match to protein family HMM PF00534; iron compounds ABC transporter ATP-binding protein complement(1457251..1458366) Campylobacter concisus 13826 5596002 YP_001467294.1 CDS fecD NC_009802.1 1458369 1460468 R identified by match to protein family HMM PF02516; iron chelatin ABC transporter permease complement(1458369..1460468) Campylobacter concisus 13826 5595799 YP_001467295.1 CDS fecB NC_009802.1 1460461 1461585 R identified by match to protein family HMM PF00534; iron chelatin ABC transporter substrate binding protein complement(1460461..1461585) Campylobacter concisus 13826 5597433 YP_001467296.1 CDS CCC13826_0454 NC_009802.1 1461582 1462625 R identified by match to protein family HMM PF00534; nitric oxide reductase large subunit complement(1461582..1462625) Campylobacter concisus 13826 5596176 YP_001467297.1 CDS CCC13826_0455 NC_009802.1 1462622 1463680 R identified by match to protein family HMM PF00534; glycosyl transferase group 1 complement(1462622..1463680) Campylobacter concisus 13826 5597040 YP_001467298.1 CDS CCC13826_0456 NC_009802.1 1463677 1464609 R identified by match to protein family HMM PF00535; glycosyl transferase group 2 complement(1463677..1464609) Campylobacter concisus 13826 5597063 YP_001467299.1 CDS CCC13826_0457 NC_009802.1 1464610 1465371 R identified by match to protein family HMM PF01755; ExsB complement(1464610..1465371) Campylobacter concisus 13826 5595819 YP_001467300.1 CDS CCC13826_0458 NC_009802.1 1465372 1466889 R identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(1465372..1466889) Campylobacter concisus 13826 5595883 YP_001467301.1 CDS CCC13826_0460 NC_009802.1 1466889 1469018 R identified by match to protein family HMM PF02516; hydroxylamine reductase (hybrid-cluster protein; HCP) complement(1466889..1469018) Campylobacter concisus 13826 5596633 YP_001467302.1 CDS CCC13826_0461 NC_009802.1 1469027 1470259 R identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; nucleotide sugar dehydrogenase subfamily protein complement(1469027..1470259) Campylobacter concisus 13826 5597127 YP_001467303.1 CDS CCC13826_0462 NC_009802.1 1470256 1470702 R identified by glimmer; hypothetical protein complement(1470256..1470702) Campylobacter concisus 13826 5595822 YP_001467304.1 CDS CCC13826_0463 NC_009802.1 1470699 1472021 R identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; nucleotide sugar dehydrogenase subfamily protein complement(1470699..1472021) Campylobacter concisus 13826 5596834 YP_001467305.1 CDS galE NC_009802.1 1472030 1473013 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase complement(1472030..1473013) Campylobacter concisus 13826 5595925 YP_001467306.1 CDS CCC13826_0466 NC_009802.1 1473204 1474244 D identified by match to protein family HMM PF00296; soluble lytic murein transglycosylase 1473204..1474244 Campylobacter concisus 13826 5596340 YP_001467307.1 CDS CCC13826_0465 NC_009802.1 1474241 1475068 R catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase complement(1474241..1475068) Campylobacter concisus 13826 5597571 YP_001467308.1 CDS CCC13826_0467 NC_009802.1 1475089 1475667 R identified by match to protein family HMM PF03352; hypothetical protein complement(1475089..1475667) Campylobacter concisus 13826 5596743 YP_001467309.1 CDS CCC13826_0468 NC_009802.1 1475668 1476726 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; glutamyl-tRNA synthetase (glutamate--tRNA ligase; GluRS) complement(1475668..1476726) Campylobacter concisus 13826 5597195 YP_001467310.1 CDS CCC13826_0469 NC_009802.1 1476747 1477757 R large-conductance mechanosensitive channel complement(1476747..1477757) Campylobacter concisus 13826 5596704 YP_001467311.1 CDS rfaC NC_009802.1 1477821 1478795 D identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; lipopolysaccharide heptosyltransferase I 1477821..1478795 Campylobacter concisus 13826 5596816 YP_001467312.1 CDS CCC13826_0471 NC_009802.1 1478788 1479681 D acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes; lipid A biosynthesis lauroyl acyltransferase 1478788..1479681 Campylobacter concisus 13826 5597238 YP_001467313.1 CDS CCC13826_0472 NC_009802.1 1479675 1480379 D identified by match to protein family HMM PF00535; glycosyl transferase group 2 1479675..1480379 Campylobacter concisus 13826 5597004 YP_001467314.1 CDS CCC13826_0473 NC_009802.1 1480376 1481446 D identified by match to protein family HMM PF01075; match to protein family HMM TIGR02201; lipopolysaccharide heptosyltransferase III 1480376..1481446 Campylobacter concisus 13826 5595583 YP_001467315.1 CDS CCC13826_0474 NC_009802.1 1481443 1482516 D identified by match to protein family HMM PF00534; phosphatidylserine decarboxylase proenzyme 1481443..1482516 Campylobacter concisus 13826 5596596 YP_001467316.1 CDS CCC13826_0475 NC_009802.1 1482513 1483310 D identified by match to protein family HMM PF01522; GMP synthase [glutamine-hydrolyzing] (glutamineamidotransferase; GMP synthetase) 1482513..1483310 Campylobacter concisus 13826 5596955 YP_001467317.1 CDS CCC13826_0476 NC_009802.1 1483320 1484090 R identified by match to protein family HMM PF01522; NhaD complement(1483320..1484090) Campylobacter concisus 13826 5597178 YP_001467318.1 CDS CCC13826_0477 NC_009802.1 1484087 1485136 R identified by match to protein family HMM PF00534; glycosyl transferase group 1 complement(1484087..1485136) Campylobacter concisus 13826 5596511 YP_001467319.1 CDS CCC13826_0478 NC_009802.1 1485326 1486357 D identified by match to protein family HMM PF00534; glycosyl transferase group 1 1485326..1486357 Campylobacter concisus 13826 5595876 YP_001467320.1 CDS rfaF NC_009802.1 1486354 1487307 D identified by match to protein family HMM PF01075; match to protein family HMM TIGR02195; lipopolysaccharide heptosyltransferase II 1486354..1487307 Campylobacter concisus 13826 5597419 YP_001467321.1 CDS CCC13826_0481 NC_009802.1 1487690 1488241 D identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; DJ-1 family protein 1487690..1488241 Campylobacter concisus 13826 5597259 YP_001467322.1 CDS CCC13826_0482 NC_009802.1 1488515 1488712 D identified by match to protein family HMM PF00076; HIT family protein 1488515..1488712 Campylobacter concisus 13826 5596801 YP_001467323.1 CDS CCC13826_0484 NC_009802.1 1488720 1489583 D identified by match to protein family HMM PF00749; phenylalanyl-tRNA synthetase beta chain (phenylalanine--tRNA ligase beta chain; PheRS) 1488720..1489583 Campylobacter concisus 13826 5596361 YP_001467324.1 CDS CCC13826_0483 NC_009802.1 1489569 1490276 R phenylalanyl-tRNA synthetase alpha chain (phenylalanine--tRNA ligase alpha chain; PheRS) complement(1489569..1490276) Campylobacter concisus 13826 5597257 YP_001467325.1 CDS dnaE NC_009802.1 1490292 1493903 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(1490292..1493903) Campylobacter concisus 13826 5596872 YP_001467326.1 CDS CCC13826_0486 NC_009802.1 1493877 1494029 D 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1493877..1494029 Campylobacter concisus 13826 5597511 YP_001467327.1 CDS CCC13826_0487 NC_009802.1 1494574 1495425 R identified by match to protein family HMM PF00582; ribosomal protein S1 complement(1494574..1495425) Campylobacter concisus 13826 5596990 YP_001467328.1 CDS CCC13826_0488 NC_009802.1 1495444 1497642 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase complement(1495444..1497642) Campylobacter concisus 13826 5597076 YP_001467329.1 CDS serA NC_009802.1 1497632 1498330 R phosphoglycerate dehydrogenase complement(1497632..1498330) Campylobacter concisus 13826 5597693 YP_001467330.1 CDS CCC13826_0490 NC_009802.1 1498343 1500505 R identified by match to protein family HMM PF04453; elongation factor P (EF-P) complement(1498343..1500505) Campylobacter concisus 13826 5596380 YP_001467331.1 CDS CCC13826_0491 NC_009802.1 1500498 1500947 R identified by match to protein family HMM PF06271; RDD family protein complement(1500498..1500947) Campylobacter concisus 13826 5596399 YP_001467332.1 CDS purD NC_009802.1 1500944 1502188 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1500944..1502188) Campylobacter concisus 13826 5597383 YP_001467333.1 CDS hemD NC_009802.1 1502421 1503059 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase complement(1502421..1503059) Campylobacter concisus 13826 5596439 YP_001467334.1 CDS moeB NC_009802.1 1503052 1504212 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710; molybdopterin biosynthesis protein complement(1503052..1504212) Campylobacter concisus 13826 5596901 YP_001467335.1 CDS CCC13826_0495 NC_009802.1 1504323 1504967 R identified by match to protein family HMM PF07883; 5'-nucleotidase SurE complement(1504323..1504967) Campylobacter concisus 13826 5597128 YP_001467336.1 CDS mnmC NC_009802.1 1505041 1506906 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(1505041..1506906) Campylobacter concisus 13826 5597299 YP_001467337.1 CDS CCC13826_0497 NC_009802.1 1506903 1508342 R identified by match to protein family HMM PF01520; transcription elongation factor GreA complement(1506903..1508342) Campylobacter concisus 13826 5596079 YP_001467338.1 CDS CCC13826_0498 NC_009802.1 1508339 1509430 R identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase family oxidoreductase complement(1508339..1509430) Campylobacter concisus 13826 5595841 YP_001467339.1 CDS tyrS NC_009802.1 1509431 1510639 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(1509431..1510639) Campylobacter concisus 13826 5595758 YP_001467340.1 CDS CCC13826_0500 NC_009802.1 1510649 1512838 R ATP:GTP 3'-pyrophosphotransferase; ppGpp synthetase I; (P)ppGpp synthetase; identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase complement(1510649..1512838) Campylobacter concisus 13826 5596734 YP_001467341.1 CDS rpoZ NC_009802.1 1512825 1513040 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and subunit alphas; DNA-directed RNA polymerase subunit omega complement(1512825..1513040) Campylobacter concisus 13826 5596958 YP_001467342.1 CDS pyrH NC_009802.1 1513059 1513775 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(1513059..1513775) Campylobacter concisus 13826 5597611 YP_001467343.1 CDS CCC13826_0503 NC_009802.1 1513849 1515066 R identified by match to protein family HMM PF01551; transaldolase complement(1513849..1515066) Campylobacter concisus 13826 5595765 YP_001467344.1 CDS CCC13826_0504 NC_009802.1 1515063 1515878 R identified by match to protein family HMM PF02687; cell division protein FtsX complement(1515063..1515878) Campylobacter concisus 13826 5596218 YP_001467345.1 CDS CCC13826_0505 NC_009802.1 1515865 1516536 R identified by match to protein family HMM PF00005; 50S ribosomal protein L25 (general stress protein Ctc) complement(1515865..1516536) Campylobacter concisus 13826 5596852 YP_001467346.1 CDS trmB NC_009802.1 1516520 1517707 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1516520..1517707) Campylobacter concisus 13826 5597368 YP_001467347.1 CDS lysA NC_009802.1 1518239 1518784 R identified by match to protein family HMM PF00041; diaminopimelate decarboxylase dap decarboxylase complement(1518239..1518784) Campylobacter concisus 13826 5597120 YP_001467348.1 CDS CCC13826_0509 NC_009802.1 1518846 1519817 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; P-protein complement(1518846..1519817) Campylobacter concisus 13826 5596910 YP_001467349.1 CDS CCC13826_0511 NC_009802.1 1519981 1520976 D identified by match to protein family HMM PF01098; histidinol-phosphate aminotransferase (imidazole acetol-phosphate transaminase) 1519981..1520976 Campylobacter concisus 13826 5597324 YP_001467350.1 CDS CCC13826_0512 NC_009802.1 1521507 1522175 R hypothetical protein complement(1521507..1522175) Campylobacter concisus 13826 5597143 YP_001467351.1 CDS fliG NC_009802.1 1522254 1523072 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(1522254..1523072) Campylobacter concisus 13826 5596122 YP_001467352.1 CDS tpiA NC_009802.1 1523241 1523924 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(1523241..1523924) Campylobacter concisus 13826 5595597 YP_001467353.1 CDS pgk NC_009802.1 1523928 1525127 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(1523928..1525127) Campylobacter concisus 13826 5596043 YP_001467354.1 CDS gap NC_009802.1 1525144 1526142 R identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase complement(1525144..1526142) Campylobacter concisus 13826 5597660 YP_001467355.1 CDS gerC NC_009802.1 1526222 1527103 D identified by match to protein family HMM PF01467; match to protein family HMM PF02410; match to protein family HMM TIGR00090; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; gerC2 protein 1526222..1527103 Campylobacter concisus 13826 5596870 YP_001467356.1 CDS CCC13826_0517 NC_009802.1 1527087 1528070 R identified by match to protein family HMM PF03601; match to protein family HMM TIGR00698; hypothetical protein complement(1527087..1528070) Campylobacter concisus 13826 5596080 YP_001467357.1 CDS CCC13826_0519 NC_009802.1 1528174 1529109 D exodeoxyribonuclease VII large subunit; exonuclease VII largesubunit; identified by match to protein family HMM PF02397; exodeoxyribonuclease 7 large subunit 1528174..1529109 Campylobacter concisus 13826 5597362 YP_001467358.1 CDS CCC13826_0520 NC_009802.1 1529110 1530315 R identified by match to protein family HMM PF00534; phosphoserine aminotransferase, (psat) complement(1529110..1530315) Campylobacter concisus 13826 5595949 YP_001467359.1 CDS CCC13826_0521 NC_009802.1 1530308 1531372 R identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase complement(1530308..1531372) Campylobacter concisus 13826 5596874 YP_001467360.1 CDS CCC13826_0522 NC_009802.1 1531374 1532399 R identified by match to protein family HMM PF00534; hypothetical protein complement(1531374..1532399) Campylobacter concisus 13826 5597395 YP_001467361.1 CDS trpE NC_009802.1 1532414 1533493 R anthranilate synthase, component I complement(1532414..1533493) Campylobacter concisus 13826 5595658 YP_001467362.1 CDS asnB NC_009802.1 1533511 1535298 R identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase (glutamine-hydrolyzing) complement(1533511..1535298) Campylobacter concisus 13826 5596775 YP_001467363.1 CDS CCC13826_0525 NC_009802.1 1535347 1535961 R phosphatidylserine decarboxylase proenzyme complement(1535347..1535961) Campylobacter concisus 13826 5597295 YP_001467364.1 CDS gtp NC_009802.1 1536402 1537277 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993; GTP-binding protein complement(1536402..1537277) Campylobacter concisus 13826 5596785 YP_001467365.1 CDS CCC13826_0528 NC_009802.1 1537912 1539306 R Leucine aminopeptidase; LAP; leucyl aminopeptidase; identified by match to protein family HMM PF01943; cytosol aminopeptidase complement(1537912..1539306) Campylobacter concisus 13826 5595958 YP_001467366.1 CDS CCC13826_0529 NC_009802.1 1539316 1540602 R DedA family protein complement(1539316..1540602) Campylobacter concisus 13826 5596928 YP_001467367.1 CDS CCC13826_0530 NC_009802.1 1540599 1541606 R identified by match to protein family HMM PF02911; adenine phosphoribosyltransferase (aprt) complement(1540599..1541606) Campylobacter concisus 13826 5595975 YP_001467368.1 CDS CCC13826_0532 NC_009802.1 1542931 1543596 R hypothetical protein complement(1542931..1543596) Campylobacter concisus 13826 5596256 YP_001467369.1 CDS CCC13826_0533 NC_009802.1 1543593 1544603 R undetermined role; similar to CarB protein but much smaller; carbamoyl phosphate synthase-like protein complement(1543593..1544603) Campylobacter concisus 13826 5597232 YP_001467370.1 CDS CCC13826_0534 NC_009802.1 1544593 1545276 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(1544593..1545276) Campylobacter concisus 13826 5595704 YP_001467371.1 CDS CCC13826_0535 NC_009802.1 1545273 1546412 R hypothetical protein complement(1545273..1546412) Campylobacter concisus 13826 5595723 YP_001467372.1 CDS asnB NC_009802.1 1546427 1548415 R identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase (glutamine-hydrolyzing) complement(1546427..1548415) Campylobacter concisus 13826 5597267 YP_001467373.1 CDS CCC13826_0537 NC_009802.1 1548417 1549631 R identified by match to protein family HMM PF01041; integral membrane protein complement(1548417..1549631) Campylobacter concisus 13826 5597663 YP_001467374.1 CDS CCC13826_0538 NC_009802.1 1549594 1550502 R identified by glimmer; hypothetical protein complement(1549594..1550502) Campylobacter concisus 13826 5596281 YP_001467375.1 CDS CCC13826_0539 NC_009802.1 1550606 1551592 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; hypothetical protein complement(1550606..1551592) Campylobacter concisus 13826 5596293 YP_001467376.1 CDS CCC13826_0540 NC_009802.1 1551606 1552694 R identified by match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; thioesterase complement(1551606..1552694) Campylobacter concisus 13826 5595684 YP_001467377.1 CDS CCC13826_0541 NC_009802.1 1552698 1553273 R identified by match to protein family HMM PF00132; hexapaptide repeat-containing transferase complement(1552698..1553273) Campylobacter concisus 13826 5597405 YP_001467378.1 CDS CCC13826_0542 NC_009802.1 1553273 1554238 R identified by match to protein family HMM PF01408; match to protein family HMM PF02894; uracil-DNA glycosylase complement(1553273..1554238) Campylobacter concisus 13826 5597491 YP_001467379.1 CDS argS NC_009802.1 1554271 1555854 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(1554271..1555854) Campylobacter concisus 13826 5596299 YP_001467380.1 CDS CCC13826_0544 NC_009802.1 1555864 1556085 R identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; twin arginine-targeting protein translocase complement(1555864..1556085) Campylobacter concisus 13826 5597567 YP_001467381.1 CDS gmk NC_009802.1 1556137 1556748 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1556137..1556748) Campylobacter concisus 13826 5596252 YP_001467382.1 CDS CCC13826_0546 NC_009802.1 1556749 1558305 R hypothetical protein complement(1556749..1558305) Campylobacter concisus 13826 5595831 YP_001467383.1 CDS fliR NC_009802.1 1558362 1559123 R FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR complement(1558362..1559123) Campylobacter concisus 13826 5596398 YP_001467384.1 CDS mda NC_009802.1 1559214 1559858 R identified by match to protein family HMM PF00005; modulator of drug activity complement(1559214..1559858) Campylobacter concisus 13826 5595654 YP_001467385.1 CDS tsf NC_009802.1 1559858 1560904 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1559858..1560904) Campylobacter concisus 13826 5596733 YP_001467386.1 CDS rpsB NC_009802.1 1560922 1561710 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1560922..1561710) Campylobacter concisus 13826 5597012 YP_001467387.1 CDS iadA NC_009802.1 1561901 1563040 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR01975; isoaspartyl dipeptidase complement(1561901..1563040) Campylobacter concisus 13826 5597235 YP_001467388.1 CDS CCC13826_0553 NC_009802.1 1563051 1563260 R hypothetical protein complement(1563051..1563260) Campylobacter concisus 13826 5597194 YP_001467389.1 CDS CCC13826_0554 NC_009802.1 1563250 1563969 R identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein complement(1563250..1563969) Campylobacter concisus 13826 5597661 YP_001467390.1 CDS ribE NC_009802.1 1563980 1564594 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(1563980..1564594) Campylobacter concisus 13826 5597016 YP_001467391.1 CDS CCC13826_0557 NC_009802.1 1564907 1565023 D identified by glimmer; hypothetical protein 1564907..1565023 Campylobacter concisus 13826 5597637 YP_001467392.1 CDS CCC13826_0556 NC_009802.1 1565020 1565862 R identified by match to protein family HMM PF09234; peptide methionine sulfoxide reductase MsrA/msrB complement(1565020..1565862) Campylobacter concisus 13826 5597684 YP_001467393.1 CDS accA NC_009802.1 1566932 1567867 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1566932..1567867) Campylobacter concisus 13826 5596963 YP_001467394.1 CDS fabF NC_009802.1 1567869 1569080 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(1567869..1569080) Campylobacter concisus 13826 5595790 YP_001467395.1 CDS acpP NC_009802.1 1569115 1569348 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(1569115..1569348) Campylobacter concisus 13826 5596709 YP_001467396.1 CDS fabG NC_009802.1 1569435 1570178 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(1569435..1570178) Campylobacter concisus 13826 5595862 YP_001467397.1 CDS gpmI NC_009802.1 1570215 1571678 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(1570215..1571678) Campylobacter concisus 13826 5595927 YP_001467398.1 CDS CCC13826_0565 NC_009802.1 1572826 1573341 D identified by glimmer; hypothetical protein 1572826..1573341 Campylobacter concisus 13826 5596061 YP_001467399.1 CDS murD NC_009802.1 1573346 1574563 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1573346..1574563 Campylobacter concisus 13826 5596253 YP_001467400.1 CDS CCC13826_0567 NC_009802.1 1574735 1576618 D identified by glimmer; hypothetical protein 1574735..1576618 Campylobacter concisus 13826 5597085 YP_001467401.1 CDS CCC13826_0568 NC_009802.1 1576686 1581986 D hypothetical protein 1576686..1581986 Campylobacter concisus 13826 5596073 YP_001467402.1 CDS CCC13826_0638 NC_009802.1 1582376 1583269 R identified by match to protein family HMM PF00589; lipoprotein complement(1582376..1583269) Campylobacter concisus 13826 5597528 YP_001467403.1 CDS CCC13826_2272 NC_009802.1 1583269 1583880 R glutathionylspermidine synthase family protein complement(1583269..1583880) Campylobacter concisus 13826 5596755 YP_001467404.1 CDS CCC13826_2273 NC_009802.1 1583895 1585235 R identified by match to protein family HMM PF05840; bacteriophage replication gene A protein complement(1583895..1585235) Campylobacter concisus 13826 5597696 YP_001467405.1 CDS CCC13826_2274 NC_009802.1 1585467 1585853 R protein yitk complement(1585467..1585853) Campylobacter concisus 13826 5596115 YP_001467406.1 CDS CCC13826_1101 NC_009802.1 1585894 1586115 R phosphonate uptake transporter complement(1585894..1586115) Campylobacter concisus 13826 5595811 YP_001467407.1 CDS CCC13826_1102 NC_009802.1 1586807 1587043 D sensory box protein 1586807..1587043 Campylobacter concisus 13826 5595627 YP_001467408.1 CDS CCC13826_2275 NC_009802.1 1587044 1587496 D identified by glimmer; hypothetical protein 1587044..1587496 Campylobacter concisus 13826 5597393 YP_001467409.1 CDS CCC13826_2082 NC_009802.1 1587598 1588380 R identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family protein complement(1587598..1588380) Campylobacter concisus 13826 5597535 YP_001467410.1 CDS CCC13826_1099 NC_009802.1 1588755 1589966 R identified by match to protein family HMM PF05840; radical SAM domain-containing protein complement(1588755..1589966) Campylobacter concisus 13826 5596283 YP_001467411.1 CDS CCC13826_1100 NC_009802.1 1590015 1591184 R ABC transporter ATP-binding protein complement(1590015..1591184) Campylobacter concisus 13826 5595846 YP_001467412.1 CDS CCC13826_2276 NC_009802.1 1591228 1592352 R identified by match to protein family HMM PF05707; zonular occludens toxin (Zot) family protein complement(1591228..1592352) Campylobacter concisus 13826 5597139 YP_001467413.1 CDS CCC13826_2277 NC_009802.1 1592354 1592800 R hypothetical protein complement(1592354..1592800) Campylobacter concisus 13826 5596494 YP_001467414.1 CDS CCC13826_0183 NC_009802.1 1592797 1594923 R identified by glimmer; hypothetical protein complement(1592797..1594923) Campylobacter concisus 13826 5597685 YP_001467415.1 CDS CCC13826_0184 NC_009802.1 1594955 1595095 D identified by glimmer; hypothetical protein 1594955..1595095 Campylobacter concisus 13826 5595823 YP_001467416.1 CDS CCC13826_2278 NC_009802.1 1595477 1595698 R phosphonate uptake transporter complement(1595477..1595698) Campylobacter concisus 13826 5596452 YP_001467417.1 CDS CCC13826_0164 NC_009802.1 1596412 1596648 D hypothetical protein 1596412..1596648 Campylobacter concisus 13826 5595662 YP_001467418.1 CDS CCC13826_2078 NC_009802.1 1596649 1597101 D identified by glimmer; hypothetical protein 1596649..1597101 Campylobacter concisus 13826 5597432 YP_001467419.1 CDS CCC13826_2077 NC_009802.1 1597203 1598111 R identified by match to protein family HMM PF00589; phage integrase complement(1597203..1598111) Campylobacter concisus 13826 5596545 YP_001467420.1 CDS CCC13826_0020 NC_009802.1 1598360 1599571 R identified by match to protein family HMM PF05840; bacteriophage replication gene A protein complement(1598360..1599571) Campylobacter concisus 13826 5595582 YP_001467421.1 CDS CCC13826_0019 NC_009802.1 1599620 1600789 R identified by glimmer; hypothetical protein complement(1599620..1600789) Campylobacter concisus 13826 5596981 YP_001467422.1 CDS CCC13826_2075 NC_009802.1 1600833 1601957 R identified by match to protein family HMM PF05707; zonular occludens toxin (Zot) family protein complement(1600833..1601957) Campylobacter concisus 13826 5597469 YP_001467423.1 CDS CCC13826_2074 NC_009802.1 1601959 1602405 R identified by glimmer; hypothetical protein complement(1601959..1602405) Campylobacter concisus 13826 5597078 YP_001467424.1 CDS CCC13826_1299 NC_009802.1 1602402 1604528 R identified by glimmer; hypothetical protein complement(1602402..1604528) Campylobacter concisus 13826 5596768 YP_001467425.1 CDS CCC13826_1298 NC_009802.1 1604560 1604700 D identified by glimmer; hypothetical protein 1604560..1604700 Campylobacter concisus 13826 5595795 YP_001467426.1 CDS CCC13826_2279 NC_009802.1 1605082 1605303 R phosphonate uptake transporter complement(1605082..1605303) Campylobacter concisus 13826 5596691 YP_001467427.1 CDS CCC13826_0185 NC_009802.1 1606017 1606253 D sensory box protein 1606017..1606253 Campylobacter concisus 13826 5596631 YP_001467428.1 CDS CCC13826_0186 NC_009802.1 1606254 1606706 D identified by glimmer; hypothetical protein 1606254..1606706 Campylobacter concisus 13826 5597579 YP_001467429.1 CDS CCC13826_0706 NC_009802.1 1606808 1607701 R identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family protein complement(1606808..1607701) Campylobacter concisus 13826 5596306 YP_001467430.1 CDS CCC13826_0189 NC_009802.1 1608327 1609667 R identified by match to protein family HMM PF05840; bacteriophage replication gene A protein complement(1608327..1609667) Campylobacter concisus 13826 5596006 YP_001467431.1 CDS CCC13826_0190 NC_009802.1 1609899 1611041 R identified by match to protein family HMM PF00263; type II and III secretion system protein complement(1609899..1611041) Campylobacter concisus 13826 5596752 YP_001467432.1 CDS CCC13826_0191 NC_009802.1 1610992 1612116 R identified by glimmer; hypothetical protein complement(1610992..1612116) Campylobacter concisus 13826 5596505 YP_001467433.1 CDS CCC13826_0192 NC_009802.1 1612118 1612438 R identified by glimmer; hypothetical protein complement(1612118..1612438) Campylobacter concisus 13826 5596960 YP_001467434.1 CDS CCC13826_0193 NC_009802.1 1612537 1613946 R identified by glimmer; hypothetical protein complement(1612537..1613946) Campylobacter concisus 13826 5595930 YP_001467435.1 CDS CCC13826_0196 NC_009802.1 1614489 1614707 R hypothetical protein complement(1614489..1614707) Campylobacter concisus 13826 5597537 YP_001467436.1 CDS CCC13826_0197 NC_009802.1 1614801 1615178 R hypothetical protein complement(1614801..1615178) Campylobacter concisus 13826 5596107 YP_001467437.1 CDS CCC13826_0198 NC_009802.1 1615472 1615681 D identified by glimmer; hypothetical protein 1615472..1615681 Campylobacter concisus 13826 5596351 YP_001467438.1 CDS CCC13826_0199 NC_009802.1 1615681 1616148 D identified by glimmer; hypothetical protein 1615681..1616148 Campylobacter concisus 13826 5596609 YP_001467439.1 CDS CCC13826_0200 NC_009802.1 1616627 1618399 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; molybdopterin oxidoreductase domain-containing protein complement(1616627..1618399) Campylobacter concisus 13826 5595598 YP_001467440.1 CDS CCC13826_0201 NC_009802.1 1618448 1618870 R identified by match to protein family HMM PF04879; molybdopterin oxidoreductase Fe4S4 subunit complement(1618448..1618870) Campylobacter concisus 13826 5597607 YP_001467441.1 CDS CCC13826_0203 NC_009802.1 1620023 1620715 D identified by match to protein family HMM PF00528; ABC transporter permease 1620023..1620715 Campylobacter concisus 13826 5597032 YP_001467442.1 CDS CCC13826_0204 NC_009802.1 1620725 1621678 D identified by match to protein family HMM PF00005; protein YabJ 1620725..1621678 Campylobacter concisus 13826 5596013 YP_001467443.1 CDS CCC13826_0205 NC_009802.1 1621924 1622619 D hypothetical protein 1621924..1622619 Campylobacter concisus 13826 5597431 YP_001467444.1 CDS CCC13826_0206 NC_009802.1 1622609 1622782 D identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein 1622609..1622782 Campylobacter concisus 13826 5596428 YP_001467445.1 CDS ttdA NC_009802.1 1623416 1625635 D identified by match to protein family HMM PF00384; match to protein family HMM PF01568; fumarate hydratase 1623416..1625635 Campylobacter concisus 13826 5595599 YP_001467446.1 CDS lemA NC_009802.1 1625637 1626278 D identified by match to protein family HMM PF00037; cytoplasmic membrane protein 1625637..1626278 Campylobacter concisus 13826 5595891 YP_001467447.1 CDS CCC13826_0210 NC_009802.1 1626309 1626452 D identified by glimmer; hypothetical protein 1626309..1626452 Campylobacter concisus 13826 5596410 YP_001467448.1 CDS fdhD NC_009802.1 1626498 1627280 D involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 1626498..1627280 Campylobacter concisus 13826 5596530 YP_001467449.1 CDS CCC13826_0212 NC_009802.1 1627273 1628016 D identified by match to protein family HMM PF00126; CBS domain-containing protein 1627273..1628016 Campylobacter concisus 13826 5597058 YP_001467450.1 CDS CCC13826_0213 NC_009802.1 1628042 1628230 D sodium-dependent tyrosine transporter 1628042..1628230 Campylobacter concisus 13826 5597180 YP_001467451.1 CDS CCC13826_0214 NC_009802.1 1628313 1629638 D identified by match to protein family HMM PF00266; aminotransferase 1628313..1629638 Campylobacter concisus 13826 5596224 YP_001467452.1 CDS CCC13826_0215 NC_009802.1 1629782 1629937 R identified by glimmer; hypothetical protein complement(1629782..1629937) Campylobacter concisus 13826 5596208 YP_001467453.1 CDS hisG NC_009802.1 1630038 1630652 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(1630038..1630652) Campylobacter concisus 13826 5596735 YP_001467454.1 CDS CCC13826_0217 NC_009802.1 1630649 1631278 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(1630649..1631278) Campylobacter concisus 13826 5597097 YP_001467455.1 CDS CCC13826_0218 NC_009802.1 1631265 1631597 R hypothetical protein complement(1631265..1631597) Campylobacter concisus 13826 5596442 YP_001467456.1 CDS CCC13826_0219 NC_009802.1 1631594 1632601 R plasminogen-binding protein PgbB complement(1631594..1632601) Campylobacter concisus 13826 5597319 YP_001467457.1 CDS CCC13826_0220 NC_009802.1 1632601 1633164 R identified by glimmer; hypothetical protein complement(1632601..1633164) Campylobacter concisus 13826 5596765 YP_001467458.1 CDS gatC NC_009802.1 1633289 1633576 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1633289..1633576 Campylobacter concisus 13826 5597406 YP_001467459.1 CDS cvpA NC_009802.1 1634710 1635330 D identified by match to protein family HMM PF02674; CvpA family protein 1634710..1635330 Campylobacter concisus 13826 5595842 YP_001467460.1 CDS CCC13826_0224 NC_009802.1 1635327 1635794 D identified by match to protein family HMM PF01475; iron-regulated membrane protein 1635327..1635794 Campylobacter concisus 13826 5597352 YP_001467461.1 CDS lysS NC_009802.1 1635796 1637307 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1635796..1637307 Campylobacter concisus 13826 5597172 YP_001467462.1 CDS glyA NC_009802.1 1637304 1638548 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1637304..1638548 Campylobacter concisus 13826 5596630 YP_001467463.1 CDS CCC13826_0227 NC_009802.1 1638548 1639090 D ABC-type transporter involved in multi-copper enzyme maturation, permease 1638548..1639090 Campylobacter concisus 13826 5596580 YP_001467464.1 CDS CCC13826_0228 NC_009802.1 1639100 1639993 D identified by match to protein family HMM PF05036; ABC transporter ATP-binding protein 1639100..1639993 Campylobacter concisus 13826 5597168 YP_001467465.1 CDS aroE NC_009802.1 1639990 1640778 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 1639990..1640778 Campylobacter concisus 13826 5596652 YP_001467466.1 CDS CCC13826_0230 NC_009802.1 1641030 1643003 D hypothetical protein 1641030..1643003 Campylobacter concisus 13826 5597233 YP_001467467.1 CDS CCC13826_0231 NC_009802.1 1643067 1644902 R identified by match to protein family HMM PF05935; arylsulfotransferase complement(1643067..1644902) Campylobacter concisus 13826 5597455 YP_001467468.1 CDS CCC13826_0232 NC_009802.1 1645109 1645852 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1645109..1645852) Campylobacter concisus 13826 5596605 YP_001467469.1 CDS CCC13826_0233 NC_009802.1 1645849 1646574 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1645849..1646574) Campylobacter concisus 13826 5596537 YP_001467470.1 CDS CCC13826_0234 NC_009802.1 1646571 1646762 R twin-arginine translocation pathway signal complement(1646571..1646762) Campylobacter concisus 13826 5597658 YP_001467471.1 CDS cooS NC_009802.1 1647642 1649681 D identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702; carbon-monoxide dehydrogenase, catalytic subunit 1647642..1649681 Campylobacter concisus 13826 5596497 YP_001467472.1 CDS CCC13826_0237 NC_009802.1 1649865 1650548 R identified by match to protein family HMM PF02621; hypothetical protein complement(1649865..1650548) Campylobacter concisus 13826 5596880 YP_001467473.1 CDS CCC13826_0238 NC_009802.1 1650545 1650817 R identified by match to protein family HMM PF01337; hypothetical protein complement(1650545..1650817) Campylobacter concisus 13826 5596629 YP_001467474.1 CDS CCC13826_0239 NC_009802.1 1650814 1651320 R identified by match to protein family HMM PF00545; S-layer-like domain-containing protein complement(1650814..1651320) Campylobacter concisus 13826 5596211 YP_001467475.1 CDS upp NC_009802.1 1651330 1651956 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(1651330..1651956) Campylobacter concisus 13826 5596216 YP_001467476.1 CDS tktA NC_009802.1 1652046 1653299 R identified by match to protein family HMM PF00390; match to protein family HMM PF03949; transketolase A complement(1652046..1653299) Campylobacter concisus 13826 5597683 YP_001467477.1 CDS gltX NC_009802.1 1653296 1654675 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(1653296..1654675) Campylobacter concisus 13826 5597704 YP_001467478.1 CDS CCC13826_0243 NC_009802.1 1654746 1655576 D identified by match to protein family HMM PF09312; periplasmic protein 1654746..1655576 Campylobacter concisus 13826 5596183 YP_001467479.1 CDS dapE NC_009802.1 1656159 1657250 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(1656159..1657250) Campylobacter concisus 13826 5596309 YP_001467480.1 CDS CCC13826_0247 NC_009802.1 1657250 1659160 R identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; cyclic diguanylate phosphodiesterase domain-containing protein complement(1657250..1659160) Campylobacter concisus 13826 5596074 YP_001467481.1 CDS CCC13826_0248 NC_009802.1 1659257 1661461 R MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein complement(1659257..1661461) Campylobacter concisus 13826 5597625 YP_001467482.1 CDS CCC13826_0249 NC_009802.1 1661458 1661802 R hypothetical protein complement(1661458..1661802) Campylobacter concisus 13826 5596059 YP_001467483.1 CDS CCC13826_0252 NC_009802.1 1663711 1664667 D identified by match to protein family HMM PF02371; aliphatic sulfonate ABC transporter permease 1663711..1664667 Campylobacter concisus 13826 5595904 YP_001467484.1 CDS CCC13826_0253 NC_009802.1 1664667 1664873 D identified by glimmer; hypothetical protein 1664667..1664873 Campylobacter concisus 13826 5595913 YP_001467485.1 CDS CCC13826_0254 NC_009802.1 1664842 1665294 D identified by glimmer; hypothetical protein 1664842..1665294 Campylobacter concisus 13826 5596555 YP_001467486.1 CDS rplQ NC_009802.1 1666799 1667098 D 50S ribosomal protein L17 1666799..1667098 Campylobacter concisus 13826 5597104 YP_001467487.1 CDS CCC13826_0257 NC_009802.1 1667109 1667909 D RNAp alphasubunit; transcriptase alpha chain; RNA polymerase subunit alpha; DNA-directed RNA polymerase alpha chain 1667109..1667909 Campylobacter concisus 13826 5596044 YP_001467488.1 CDS CCC13826_0258 NC_009802.1 1667909 1669129 D identified by glimmer; hypothetical protein 1667909..1669129 Campylobacter concisus 13826 5595651 YP_001467489.1 CDS CCC13826_0260 NC_009802.1 1669883 1670080 D hypothetical protein 1669883..1670080 Campylobacter concisus 13826 5596970 YP_001467490.1 CDS CCC13826_0262 NC_009802.1 1670918 1671199 D identified by glimmer; hypothetical protein 1670918..1671199 Campylobacter concisus 13826 5596613 YP_001467491.1 CDS CCC13826_0263 NC_009802.1 1672072 1672419 D identified by glimmer; hypothetical protein 1672072..1672419 Campylobacter concisus 13826 5596214 YP_001467492.1 CDS CCC13826_0264 NC_009802.1 1672430 1672768 D identified by glimmer; hypothetical protein 1672430..1672768 Campylobacter concisus 13826 5596255 YP_001467493.1 CDS CCC13826_0265 NC_009802.1 1672768 1673154 D 30S ribosomal protein S5 (BS5) 1672768..1673154 Campylobacter concisus 13826 5596235 YP_001467494.1 CDS CCC13826_0266 NC_009802.1 1673135 1673374 D 50S ribosomal protein L18 1673135..1673374 Campylobacter concisus 13826 5596949 YP_001467495.1 CDS CCC13826_0267 NC_009802.1 1673367 1673666 D hypothetical protein 1673367..1673666 Campylobacter concisus 13826 5597442 YP_001467496.1 CDS CCC13826_0268 NC_009802.1 1673671 1674009 D L-alanyl-D-glutamate peptidase 1673671..1674009 Campylobacter concisus 13826 5595736 YP_001467497.1 CDS CCC13826_0269 NC_009802.1 1674056 1674409 R identified by match to protein family HMM PF04237; 30S ribosomal protein S8 complement(1674056..1674409) Campylobacter concisus 13826 5597570 YP_001467498.1 CDS CCC13826_0271 NC_009802.1 1674630 1674791 D 50S ribosomal protein L5 (BL6) 1674630..1674791 Campylobacter concisus 13826 5595953 YP_001467499.1 CDS CCC13826_0270 NC_009802.1 1674756 1676291 R identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR01409; match to protein family HMM TIGR01813; flavocytochrome C flavin subunit complement(1674756..1676291) Campylobacter concisus 13826 5596965 YP_001467500.1 CDS CCC13826_0272 NC_009802.1 1676444 1677001 R identified by match to protein family HMM PF03352; 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) complement(1676444..1677001) Campylobacter concisus 13826 5595950 YP_001467501.1 CDS rpsQ NC_009802.1 1677785 1677976 R 30S ribosomal protein S17 complement(1677785..1677976) Campylobacter concisus 13826 5596935 YP_001467502.1 CDS metX NC_009802.1 1677980 1679086 R identified by match to protein family HMM PF00561; match to protein family HMM TIGR01392; homoserine O-acetyltransferase complement(1677980..1679086) Campylobacter concisus 13826 5597408 YP_001467503.1 CDS guaB NC_009802.1 1679086 1680534 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(1679086..1680534) Campylobacter concisus 13826 5597103 YP_004777023.1 CDS ileS NC_009802.1 1681997 1684753 R isoleucyl-tRNA synthetase complement(1681997..1684753) Campylobacter concisus 13826 5597249 YP_001467504.1 CDS fadD NC_009802.1 1684849 1685946 D identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; long-chain-fatty-acid--CoA ligase 1684849..1685946 Campylobacter concisus 13826 5597490 YP_001467505.1 CDS CCC13826_0280 NC_009802.1 1686036 1686854 D ATPase AAA family protein 1686036..1686854 Campylobacter concisus 13826 5596344 YP_001467506.1 CDS CCC13826_0281 NC_009802.1 1686848 1687279 D hypothetical protein 1686848..1687279 Campylobacter concisus 13826 5597240 YP_001467507.1 CDS CCC13826_0282 NC_009802.1 1687330 1689558 R hypothetical protein complement(1687330..1689558) Campylobacter concisus 13826 5595779 YP_001467508.1 CDS CCC13826_0283 NC_009802.1 1689555 1690073 R flagellum-specific ATP synthase complement(1689555..1690073) Campylobacter concisus 13826 5597667 YP_001467509.1 CDS CCC13826_0284 NC_009802.1 1690070 1690504 R identified by match to protein family HMM PF03061; GTP cyclohydrolase I (GTP-CH-I) complement(1690070..1690504) Campylobacter concisus 13826 5597645 YP_001467510.1 CDS CCC13826_2177 NC_009802.1 1690495 1692105 R identified by match to protein family HMM PF00535; glycosyl transferase group 2 complement(1690495..1692105) Campylobacter concisus 13826 5597614 YP_001467511.1 CDS CCC13826_2176 NC_009802.1 1692102 1693658 R trigger factor (TF) complement(1692102..1693658) Campylobacter concisus 13826 5596707 YP_001467512.1 CDS CCC13826_2175 NC_009802.1 1693648 1694193 R ATP-dependent Clp protease proteolytic subunit complement(1693648..1694193) Campylobacter concisus 13826 5597595 YP_001467513.1 CDS CCC13826_2174 NC_009802.1 1694183 1694428 R identified by match to protein family HMM PF00550; diguanylate cyclase complement(1694183..1694428) Campylobacter concisus 13826 5596085 YP_001467514.1 CDS CCC13826_2173 NC_009802.1 1694431 1694688 R acyl carrier protein complement(1694431..1694688) Campylobacter concisus 13826 5597204 YP_001467515.1 CDS CCC13826_2172 NC_009802.1 1694672 1695418 R identified by match to protein family HMM PF01553; acyltransferase family protein complement(1694672..1695418) Campylobacter concisus 13826 5595665 YP_001467516.1 CDS CCC13826_2171 NC_009802.1 1695408 1696076 R hypothetical protein complement(1695408..1696076) Campylobacter concisus 13826 5597036 YP_001467517.1 CDS CCC13826_2170 NC_009802.1 1696076 1696492 R gart; gartransformylase; 5'-phosphoribosylglycinamide transformylase; phosphoribosylglycinamide formyltransferase complement(1696076..1696492) Campylobacter concisus 13826 5596862 YP_001467518.1 CDS terC NC_009802.1 1696505 1697758 R identified by match to protein family HMM PF00109; match to protein family HMM PF02801; TerC protein complement(1696505..1697758) Campylobacter concisus 13826 5596179 YP_001467519.1 CDS CCC13826_2167 NC_009802.1 1698470 1698913 R cation ABC transporter permease complement(1698470..1698913) Campylobacter concisus 13826 5595851 YP_001467520.1 CDS norM NC_009802.1 1698910 1700076 R identified by match to protein family HMM PF00109; match to protein family HMM PF02801; MatE efflux family protein complement(1698910..1700076) Campylobacter concisus 13826 5596472 YP_001467521.1 CDS CCC13826_2165 NC_009802.1 1700063 1700440 R identified by glimmer; hypothetical protein complement(1700063..1700440) Campylobacter concisus 13826 5596323 YP_001467522.1 CDS CCC13826_2164 NC_009802.1 1700466 1700987 R identified by match to protein family HMM PF01648; 4'-phosphopantetheinyl transferase superfamily protein complement(1700466..1700987) Campylobacter concisus 13826 5596378 YP_001467523.1 CDS CCC13826_2163 NC_009802.1 1700968 1701651 R periplasmic solute binding protein for ABC transport system complement(1700968..1701651) Campylobacter concisus 13826 5597705 YP_001467524.1 CDS CCC13826_2162 NC_009802.1 1701828 1701941 R hypothetical protein complement(1701828..1701941) Campylobacter concisus 13826 5597189 YP_001467525.1 CDS CCC13826_2161 NC_009802.1 1702079 1702228 R ferric uptake regulation protein complement(1702079..1702228) Campylobacter concisus 13826 5596777 YP_001467526.1 CDS CCC13826_2160 NC_009802.1 1702507 1703361 R identified by match to protein family HMM PF04536; hypothetical protein complement(1702507..1703361) Campylobacter concisus 13826 5596598 YP_001467527.1 CDS CCC13826_2159 NC_009802.1 1703361 1703954 R identified by match to protein family HMM PF04011; LemA family protein complement(1703361..1703954) Campylobacter concisus 13826 5597080 YP_001467528.1 CDS CCC13826_2158 NC_009802.1 1704064 1709490 R hypothetical protein complement(1704064..1709490) Campylobacter concisus 13826 5595715 YP_001467529.1 CDS CCC13826_2157 NC_009802.1 1709784 1710191 R protein YhbP complement(1709784..1710191) Campylobacter concisus 13826 5597013 YP_001467530.1 CDS CCC13826_2156 NC_009802.1 1710192 1710527 R L-arabinose ABC transporter complement(1710192..1710527) Campylobacter concisus 13826 5596075 YP_001467531.1 CDS dgkA NC_009802.1 1710645 1711166 D diacylglycerol kinase 1710645..1711166 Campylobacter concisus 13826 5596364 YP_001467532.1 CDS CCC13826_2154 NC_009802.1 1711185 1711925 R integral membrane protein complement(1711185..1711925) Campylobacter concisus 13826 5597378 YP_001467533.1 CDS CCC13826_2153 NC_009802.1 1711922 1712617 R identified by match to protein family HMM PF08761; dUTPase complement(1711922..1712617) Campylobacter concisus 13826 5596947 YP_001467534.1 CDS CCC13826_2151 NC_009802.1 1712747 1712935 D hypothetical protein 1712747..1712935 Campylobacter concisus 13826 5595781 YP_001467535.1 CDS CCC13826_2152 NC_009802.1 1712932 1715301 R identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; molybdenum-pterin binding protein complement(1712932..1715301) Campylobacter concisus 13826 5597652 YP_001467536.1 CDS CCC13826_2150 NC_009802.1 1715366 1715905 D 30S ribosomal protein S20 1715366..1715905 Campylobacter concisus 13826 5595957 YP_001467537.1 CDS CCC13826_2149 NC_009802.1 1715924 1718284 R identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; phosphoglucosamine mutase complement(1715924..1718284) Campylobacter concisus 13826 5595578 YP_001467538.1 CDS lspA NC_009802.1 1718277 1720121 R lipoprotein signal peptidase complement(1718277..1720121) Campylobacter concisus 13826 5595805 YP_001467539.1 CDS CCC13826_2146 NC_009802.1 1720212 1720625 D identified by match to protein family HMM PF03061; thioesterase 1720212..1720625 Campylobacter concisus 13826 5595806 YP_001467540.1 CDS CCC13826_2145 NC_009802.1 1720775 1721413 D identified by glimmer; hypothetical protein 1720775..1721413 Campylobacter concisus 13826 5596430 YP_001467541.1 CDS CCC13826_2144 NC_009802.1 1721421 1721888 R identified by glimmer; hypothetical protein complement(1721421..1721888) Campylobacter concisus 13826 5596408 YP_001467542.1 CDS moaE NC_009802.1 1721900 1722334 R identified by match to protein family HMM PF02391; molybdopterin converting factor, subunit 2 complement(1721900..1722334) Campylobacter concisus 13826 5595966 YP_001467543.1 CDS nspC NC_009802.1 1722642 1723781 D identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047; carboxynorspermidine decarboxylase 1722642..1723781 Campylobacter concisus 13826 5597234 YP_001467544.1 CDS gdhA NC_009802.1 1723791 1723916 D glutamate dehydrogenase, NADP-specific 1723791..1723916 Campylobacter concisus 13826 5597549 YP_001467545.1 CDS CCC13826_2139 NC_009802.1 1724063 1724659 R identified by match to protein family HMM PF01965; DJ-1/PfpI family protein complement(1724063..1724659) Campylobacter concisus 13826 5596414 YP_001467546.1 CDS CCC13826_2138 NC_009802.1 1724894 1725841 D identified by match to protein family HMM TIGR01583; formate dehydrogenase, cytochrome B subunit 1724894..1725841 Campylobacter concisus 13826 5597639 YP_001467547.1 CDS CCC13826_2136 NC_009802.1 1725988 1726590 D identified by match to protein family HMM PF01206; translation initiation factor IF-3 1725988..1726590 Campylobacter concisus 13826 5597576 YP_001467548.1 CDS selD NC_009802.1 1726863 1727609 D identified by match to protein family HMM PF02769; match to protein family HMM TIGR00476; selenide, water dikinase 1726863..1727609 Campylobacter concisus 13826 5596028 YP_001467549.1 CDS CCC13826_2134 NC_009802.1 1727722 1728342 D identified by match to protein family HMM PF00881; nitroreductase family protein 1727722..1728342 Campylobacter concisus 13826 5596372 YP_001467550.1 CDS CCC13826_2133 NC_009802.1 1728430 1732515 D identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; YbaK 1728430..1732515 Campylobacter concisus 13826 5595635 YP_001467551.1 CDS hisZ NC_009802.1 1732508 1733368 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 1732508..1733368 Campylobacter concisus 13826 5597018 YP_001467552.1 CDS purA NC_009802.1 1733371 1734621 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1733371..1734621 Campylobacter concisus 13826 5597517 YP_001467553.1 CDS CCC13826_2130 NC_009802.1 1734618 1735040 D hypothetical protein 1734618..1735040 Campylobacter concisus 13826 5596229 YP_001467554.1 CDS CCC13826_2129 NC_009802.1 1735040 1735603 D ATPase, AAA family protein 1735040..1735603 Campylobacter concisus 13826 5596650 YP_001467555.1 CDS CCC13826_2128 NC_009802.1 1735692 1736273 D identified by match to protein family HMM PF03486; hypothetical protein 1735692..1736273 Campylobacter concisus 13826 5595895 YP_001467556.1 CDS carB NC_009802.1 1736326 1739586 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(1736326..1739586) Campylobacter concisus 13826 5595786 YP_001467557.1 CDS CCC13826_2126 NC_009802.1 1739586 1740305 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1739586..1740305) Campylobacter concisus 13826 5596968 YP_001467558.1 CDS CCC13826_2125 NC_009802.1 1740331 1741368 R identified by match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904; rod shape-determining protein MreB complement(1740331..1741368) Campylobacter concisus 13826 5595900 YP_001467559.1 CDS clpX NC_009802.1 1741378 1742610 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1741378..1742610) Campylobacter concisus 13826 5597655 YP_001467560.1 CDS fabZ NC_009802.1 1743423 1743869 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(1743423..1743869) Campylobacter concisus 13826 5595695 YP_001467561.1 CDS CCC13826_2121 NC_009802.1 1743980 1745056 R identified by match to protein family HMM PF02677; hypothetical protein complement(1743980..1745056) Campylobacter concisus 13826 5596895 YP_001467562.1 CDS CCC13826_2120 NC_009802.1 1745083 1745832 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1745083..1745832) Campylobacter concisus 13826 5597420 YP_001467563.1 CDS CCC13826_2119 NC_009802.1 1745829 1746509 R identified by match to protein family HMM PF00005; Vitamin-B12-independent methionine synthase isozyme; Cobalamin-independent methionine synthase isozyme; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase complement(1745829..1746509) Campylobacter concisus 13826 5596826 YP_001467564.1 CDS CCC13826_2118 NC_009802.1 1746506 1747306 R identified by match to protein family HMM PF00528; peptide ABC transporter permease complement(1746506..1747306) Campylobacter concisus 13826 5597291 YP_001467565.1 CDS pepD NC_009802.1 1747303 1748241 R identified by match to protein family HMM PF00528; dipeptidase complement(1747303..1748241) Campylobacter concisus 13826 5596547 YP_001467566.1 CDS CCC13826_2116 NC_009802.1 1748254 1749786 R identified by match to protein family HMM PF00496; hypothetical protein complement(1748254..1749786) Campylobacter concisus 13826 5596018 YP_001467567.1 CDS CCC13826_2114 NC_009802.1 1749961 1753299 D identified by match to protein family HMM PF05359; diaminopimelate epimerase (DAP epimerase) 1749961..1753299 Campylobacter concisus 13826 5596393 YP_001467568.1 CDS rplT NC_009802.1 1753296 1753700 R 50S ribosomal protein L20 complement(1753296..1753700) Campylobacter concisus 13826 5597206 YP_001467569.1 CDS CCC13826_2113 NC_009802.1 1753815 1754018 D identified by match to protein family HMM PF01361; match to protein family HMM TIGR00013; hypothetical protein 1753815..1754018 Campylobacter concisus 13826 5596698 YP_001467570.1 CDS CCC13826_2112 NC_009802.1 1754015 1754512 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; anti-oxidant AhpCTSA family protein 1754015..1754512 Campylobacter concisus 13826 5597274 YP_001467571.1 CDS CCC13826_2111 NC_009802.1 1754521 1756236 D identified by match to protein family HMM PF00884; airs; phosphoribosyl-aminoimidazole synthetase; air synthase; phosphoribosylformylglycinamidine cyclo-ligase 1754521..1756236 Campylobacter concisus 13826 5596689 YP_001467572.1 CDS CCC13826_2110 NC_009802.1 1756263 1756904 D identified by match to protein family HMM PF01323; hypothetical protein 1756263..1756904 Campylobacter concisus 13826 5597068 YP_001467573.1 CDS ilvE NC_009802.1 1757005 1757919 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1757005..1757919 Campylobacter concisus 13826 5596366 YP_001467574.1 CDS CCC13826_2108 NC_009802.1 1757936 1759048 D identified by match to protein family HMM PF01145; SPFH domain-containing protein 1757936..1759048 Campylobacter concisus 13826 5596847 YP_001467575.1 CDS CCC13826_2107 NC_009802.1 1759051 1759785 D identified by match to protein family HMM PF01502; match to protein family HMM PF01503; match to protein family HMM TIGR03188; match to protein family HMM TIGR03456; hydrolase 1759051..1759785 Campylobacter concisus 13826 5596376 YP_001467576.1 CDS CCC13826_2106 NC_009802.1 1759775 1760305 D integral membrane protein 1759775..1760305 Campylobacter concisus 13826 5597416 YP_001467577.1 CDS CCC13826_2105 NC_009802.1 1760296 1760856 D DNA gyrase subunit B 1760296..1760856 Campylobacter concisus 13826 5597118 YP_001467578.1 CDS accC NC_009802.1 1761014 1762345 R biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase complement(1761014..1762345) Campylobacter concisus 13826 5596869 YP_001467579.1 CDS accB NC_009802.1 1762345 1762797 R identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(1762345..1762797) Campylobacter concisus 13826 5597093 YP_001467580.1 CDS modB NC_009802.1 1762883 1763542 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR02141; molybdate ABC transporter permease complement(1762883..1763542) Campylobacter concisus 13826 5597392 YP_001467581.1 CDS modA NC_009802.1 1763551 1764249 R identified by match to protein family HMM TIGR01256; molybdate ABC transporter periplasmic molybdate-binding protein complement(1763551..1764249) Campylobacter concisus 13826 5595981 YP_001467582.1 CDS CCC13826_2100 NC_009802.1 1764377 1765465 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1764377..1765465 Campylobacter concisus 13826 5597591 YP_001467583.1 CDS tlpA NC_009802.1 1765474 1765971 D methyl-accepting chemotaxis protein 1765474..1765971 Campylobacter concisus 13826 5596665 YP_001467584.1 CDS CCC13826_2098 NC_009802.1 1766027 1766899 D identified by match to protein family HMM PF02642; S-ribosylhomocysteine lyase (autoinducer-2 productionprotein LuxS; AI-2 synthesis protein) 1766027..1766899 Campylobacter concisus 13826 5597057 YP_001467585.1 CDS fliQ NC_009802.1 1766899 1767165 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1766899..1767165 Campylobacter concisus 13826 5596881 YP_001467586.1 CDS murB NC_009802.1 1767162 1767959 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1767162..1767959 Campylobacter concisus 13826 5595719 YP_001467587.1 CDS CCC13826_2095 NC_009802.1 1767968 1768456 D addiction module antitoxin 1767968..1768456 Campylobacter concisus 13826 5596241 YP_001467588.1 CDS recA NC_009802.1 1768519 1769616 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1768519..1769616 Campylobacter concisus 13826 5596891 YP_001467589.1 CDS eno NC_009802.1 1769616 1770866 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1769616..1770866 Campylobacter concisus 13826 5596759 YP_001467590.1 CDS CCC13826_2092 NC_009802.1 1770863 1771153 D identified by glimmer; hypothetical protein 1770863..1771153 Campylobacter concisus 13826 5596317 YP_001467591.1 CDS CCC13826_2091 NC_009802.1 1771159 1772019 D periplasmic protein 1771159..1772019 Campylobacter concisus 13826 5597198 YP_001467592.1 CDS CCC13826_2090 NC_009802.1 1772086 1773147 D identified by match to protein family HMM PF00589; transporter 1772086..1773147 Campylobacter concisus 13826 5597150 YP_001467593.1 CDS CCC13826_2089 NC_009802.1 1773883 1776873 R identified by match to protein family HMM PF01568; match to protein family HMM PF04879; orotate phosphoribosyltransferase (oprt; oprtase) complement(1773883..1776873) Campylobacter concisus 13826 5597687 YP_001467594.1 CDS CCC13826_2088 NC_009802.1 1776887 1777624 R identified by match to protein family HMM PF00037; methyl-accepting chemotaxis sensory transducer complement(1776887..1777624) Campylobacter concisus 13826 5596641 YP_001467595.1 CDS CCC13826_2191 NC_009802.1 1780499 1781461 R identified by match to protein family HMM PF02253; two-component sensor complement(1780499..1781461) Campylobacter concisus 13826 5596647 YP_001467596.1 CDS CCC13826_2192 NC_009802.1 1781454 1782017 R hypothetical protein complement(1781454..1782017) Campylobacter concisus 13826 5596265 YP_001467597.1 CDS CCC13826_2193 NC_009802.1 1782242 1782499 D hypothetical protein 1782242..1782499 Campylobacter concisus 13826 5595977 YP_001467598.1 CDS leuC NC_009802.1 1782820 1784085 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit complement(1782820..1784085) Campylobacter concisus 13826 5597008 YP_001467599.1 CDS CCC13826_2195 NC_009802.1 1784433 1784567 R identified by glimmer; hypothetical protein complement(1784433..1784567) Campylobacter concisus 13826 5595682 YP_001467600.1 CDS CCC13826_2196 NC_009802.1 1784641 1786455 D identified by match to protein family HMM PF00015; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1784641..1786455 Campylobacter concisus 13826 5597282 YP_001467601.1 CDS CCC13826_2197 NC_009802.1 1786527 1787849 D identified by match to protein family HMM PF05670; Hsp12 variant C 1786527..1787849 Campylobacter concisus 13826 5596658 YP_001467602.1 CDS CCC13826_2198 NC_009802.1 1787852 1788193 D hypothetical protein 1787852..1788193 Campylobacter concisus 13826 5595816 YP_001467603.1 CDS CCC13826_2199 NC_009802.1 1788482 1789057 D identified by match to protein family HMM PF04972; transport-associated 1788482..1789057 Campylobacter concisus 13826 5596512 YP_001467604.1 CDS CCC13826_2200 NC_009802.1 1789060 1791510 R hypothetical protein complement(1789060..1791510) Campylobacter concisus 13826 5597202 YP_001467605.1 CDS ttg2D NC_009802.1 1791510 1792112 R identified by match to protein family HMM PF05494; toluene tolerance protein Ttg2D complement(1791510..1792112) Campylobacter concisus 13826 5596904 YP_001467606.1 CDS CCC13826_2202 NC_009802.1 1792115 1792825 R identified by match to protein family HMM PF04333; ABC transporter ATPase complement(1792115..1792825) Campylobacter concisus 13826 5597592 YP_001467607.1 CDS CCC13826_2203 NC_009802.1 1792980 1793762 D identified by match to protein family HMM PF00126; match to protein family HMM PF03459; match to protein family HMM TIGR00638; molybdenum-pterin binding domain-containing protein 1792980..1793762 Campylobacter concisus 13826 5597285 YP_001467608.1 CDS modA NC_009802.1 1793763 1794518 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdate ABC transporter periplasmic molybdate-binding protein 1793763..1794518 Campylobacter concisus 13826 5596659 YP_001467609.1 CDS CCC13826_2205 NC_009802.1 1794515 1794904 D identified by match to protein family HMM PF03459; beta-lactamase HcpA 1794515..1794904 Campylobacter concisus 13826 5596338 YP_001467610.1 CDS CCC13826_2281 NC_009802.1 1794907 1795764 D RNA-uridine isomerase; RNA pseudouridylate synthase; identified by match to protein family HMM PF00005; RNA pseudouridine synthase 1794907..1795764 Campylobacter concisus 13826 5597618 YP_001467611.1 CDS modB NC_009802.1 1795764 1796438 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02141; molybdate ABC transporter permease 1795764..1796438 Campylobacter concisus 13826 5597048 YP_001467612.1 CDS CCC13826_2283 NC_009802.1 1796475 1796972 D BcpB 1796475..1796972 Campylobacter concisus 13826 5596406 YP_001467613.1 CDS CCC13826_2284 NC_009802.1 1796982 1798538 D identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase; 16S rRNA dimethylase; Highlevel kasugamycin resistance protein KsgA; Kasugamycindimethyltransferase; dimethyladenosine transferase 1796982..1798538 Campylobacter concisus 13826 5597642 YP_001467614.1 CDS CCC13826_2285 NC_009802.1 1798540 1799004 D DNA helicase related protein 1798540..1799004 Campylobacter concisus 13826 5596821 YP_001467615.1 CDS CCC13826_2286 NC_009802.1 1799007 1799810 R identified by match to protein family HMM PF00459; protein CysQ complement(1799007..1799810) Campylobacter concisus 13826 5597335 YP_001467616.1 CDS gltA NC_009802.1 1799807 1801084 R identified by match to protein family HMM PF00285; match to protein family HMM TIGR01798; citrate (Si)-synthase complement(1799807..1801084) Campylobacter concisus 13826 5596227 YP_001467617.1 CDS CCC13826_2288 NC_009802.1 1801087 1802250 R identified by match to protein family HMM PF00999; radical SAM protein complement(1801087..1802250) Campylobacter concisus 13826 5596370 YP_001467618.1 CDS CCC13826_2289 NC_009802.1 1802278 1802394 D similar to jhp_0321; RNA-uridine isomerase; RNA pseudouridylate synthase; RNA pseudouridine synthase 1802278..1802394 Campylobacter concisus 13826 5596016 YP_001467619.1 CDS CCC13826_2290 NC_009802.1 1802367 1802849 D identified by glimmer; hypothetical protein 1802367..1802849 Campylobacter concisus 13826 5596325 YP_001467620.1 CDS CCC13826_2291 NC_009802.1 1802860 1802976 D identified by glimmer; hypothetical protein 1802860..1802976 Campylobacter concisus 13826 5596132 YP_001467621.1 CDS crcB NC_009802.1 1803451 1803804 R identified by match to protein family HMM PF02537; match to protein family HMM TIGR00494; CrcB protein complement(1803451..1803804) Campylobacter concisus 13826 5596823 YP_001467622.1 CDS CCC13826_2293 NC_009802.1 1803804 1804643 R catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase complement(1803804..1804643) Campylobacter concisus 13826 5596754 YP_001467623.1 CDS nrdD NC_009802.1 1804899 1805054 D oxygen-sensitive ribonucleoside-triphosphate reductase 1804899..1805054 Campylobacter concisus 13826 5596712 YP_001467624.1 CDS CCC13826_2295 NC_009802.1 1805317 1806036 R hypothetical protein complement(1805317..1806036) Campylobacter concisus 13826 5595647 YP_001467625.1 CDS topA NC_009802.1 1806096 1808210 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(1806096..1808210) Campylobacter concisus 13826 5597276 YP_001467626.1 CDS CCC13826_2297 NC_009802.1 1808412 1809911 D FlaB; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin B 1808412..1809911 Campylobacter concisus 13826 5595996 YP_001467627.1 CDS CCC13826_2298 NC_009802.1 1810187 1810957 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; flagellin modification protein A complement(1810187..1810957) Campylobacter concisus 13826 5597239 YP_001467628.1 CDS CCC13826_2299 NC_009802.1 1810944 1811651 R identified by match to protein family HMM PF02348; CMP-N-acetylneuraminic acid synthetase; CMP-NeuNAc synthetase; CMP-sialicacid synthetase; N-acylneuraminate cytidylyltransferase complement(1810944..1811651) Campylobacter concisus 13826 5596912 YP_001467629.1 CDS CCC13826_2300 NC_009802.1 1811644 1812546 R identified by match to protein family HMM PF01408; oxidoreductase family protein complement(1811644..1812546) Campylobacter concisus 13826 5597173 YP_001467630.1 CDS CCC13826_2301 NC_009802.1 1812560 1813606 R identified by match to protein family HMM PF00483; match to protein family HMM PF00571; nucleotidyl transferase complement(1812560..1813606) Campylobacter concisus 13826 5595820 YP_001467631.1 CDS CCC13826_2302 NC_009802.1 1813603 1814763 R identified by match to protein family HMM PF02350; UDP-N-acetylglucosamine 2-epimerase complement(1813603..1814763) Campylobacter concisus 13826 5596855 YP_001467632.1 CDS CCC13826_2303 NC_009802.1 1814760 1815761 R identified by match to protein family HMM PF03102; general stress protein 14 (GSP14) complement(1814760..1815761) Campylobacter concisus 13826 5597045 YP_001467633.1 CDS CCC13826_2304 NC_009802.1 1815786 1816397 R identified by match to protein family HMM PF00132; hypothetical protein complement(1815786..1816397) Campylobacter concisus 13826 5597277 YP_001467634.1 CDS CCC13826_2305 NC_009802.1 1816400 1817551 R identified by match to protein family HMM PF01041; DegT/DnrJ/EryC1/StrS aminotransferase family protein complement(1816400..1817551) Campylobacter concisus 13826 5596269 YP_001467635.1 CDS dcd NC_009802.1 1820904 1821464 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(1820904..1821464) Campylobacter concisus 13826 5596999 YP_001467636.1 CDS CCC13826_2309 NC_009802.1 1821588 1822430 D hydrogenase-4 component C 1821588..1822430 Campylobacter concisus 13826 5596011 YP_001467637.1 CDS hyfB NC_009802.1 1822451 1823011 D hydrogenase-4 component B 1822451..1823011 Campylobacter concisus 13826 5597009 YP_001467638.1 CDS CCC13826_2311 NC_009802.1 1823280 1823876 D electron transporter HydN 1823280..1823876 Campylobacter concisus 13826 5595625 YP_001467639.1 CDS CCC13826_2312 NC_009802.1 1823879 1825027 R identified by glimmer; hypothetical protein complement(1823879..1825027) Campylobacter concisus 13826 5595774 YP_001467640.1 CDS CCC13826_2314 NC_009802.1 1826222 1827115 D identified by glimmer; hypothetical protein 1826222..1827115 Campylobacter concisus 13826 5597468 YP_001467641.1 CDS CCC13826_2315 NC_009802.1 1827138 1829429 D identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; anaerobic dehydrogenase 1827138..1829429 Campylobacter concisus 13826 5597046 YP_001467642.1 CDS fbcH NC_009802.1 1829441 1829992 D identified by match to protein family HMM PF00037; ubiquinol cytochrome C oxidoreductase, cytochrome b subunit 1829441..1829992 Campylobacter concisus 13826 5596300 YP_001467643.1 CDS fbcF NC_009802.1 1830003 1830647 D identified by match to protein family HMM PF06192; ubiquinol cytochrome C oxidoreductase, Rieske 2Fe-2S subunit 1830003..1830647 Campylobacter concisus 13826 5595928 YP_001467644.1 CDS CCC13826_2318 NC_009802.1 1830651 1831535 D glucose-inhibited division protein A; identified by match to protein family HMM PF03916; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1830651..1831535 Campylobacter concisus 13826 5596507 YP_001467645.1 CDS CCC13826_2319 NC_009802.1 1831591 1832145 R identified by match to protein family HMM PF01112; 2-acylglycerophosphoethanolamine acyltransferase complement(1831591..1832145) Campylobacter concisus 13826 5596838 YP_001467646.1 CDS yckK NC_009802.1 1838221 1842981 R amino acid ABC transporter periplasmic binding protein complement(1838221..1842981) Campylobacter concisus 13826 5595884 YP_001467647.1 CDS CCC13826_1697 NC_009802.1 1843068 1843502 R identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP complement(1843068..1843502) Campylobacter concisus 13826 5597407 YP_001467648.1 CDS CCC13826_1699 NC_009802.1 1843537 1844010 D L-cystine permease TcyB 1843537..1844010 Campylobacter concisus 13826 5597273 YP_001467649.1 CDS CCC13826_1698 NC_009802.1 1843988 1844527 R L-cystine-binding protein TcyA complement(1843988..1844527) Campylobacter concisus 13826 5596063 YP_001467650.1 CDS CCC13826_1700 NC_009802.1 1844570 1845130 R identified by match to protein family HMM PF05683; match to protein family HMM TIGR00723; L-cystine import ATP-binding protein TcyC complement(1844570..1845130) Campylobacter concisus 13826 5595620 YP_001467651.1 CDS CCC13826_1701 NC_009802.1 1845140 1845985 R Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase complement(1845140..1845985) Campylobacter concisus 13826 5597507 YP_001467652.1 CDS CCC13826_1702 NC_009802.1 1846144 1846707 D identified by match to protein family HMM PF04011; LemA protein 1846144..1846707 Campylobacter concisus 13826 5596640 YP_001467653.1 CDS CCC13826_1703 NC_009802.1 1846718 1847608 D identified by glimmer; hypothetical protein 1846718..1847608 Campylobacter concisus 13826 5596761 YP_001467654.1 CDS CCC13826_1704 NC_009802.1 1847618 1848265 D sugar efflux transporter B 1847618..1848265 Campylobacter concisus 13826 5597676 YP_001467655.1 CDS CCC13826_1705 NC_009802.1 1848721 1850061 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; pyruvate-ferredoxin oxidoreductase complement(1848721..1850061) Campylobacter concisus 13826 5597041 YP_001467656.1 CDS CCC13826_1706 NC_009802.1 1850232 1851545 D identified by match to protein family HMM PF00209; sodium/neurotransmitter symporter family protein 1850232..1851545 Campylobacter concisus 13826 5595809 YP_001467657.1 CDS CCC13826_1707 NC_009802.1 1851585 1852034 R protein of unknown function, DUF; identified by match to protein family HMM PF04214; hypothetical protein complement(1851585..1852034) Campylobacter concisus 13826 5597290 YP_001467658.1 CDS CCC13826_1709 NC_009802.1 1852141 1853109 D in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; transporter 1852141..1853109 Campylobacter concisus 13826 5596468 YP_001467659.1 CDS CCC13826_1710 NC_009802.1 1853391 1853543 D identified by glimmer; hypothetical protein 1853391..1853543 Campylobacter concisus 13826 5596558 YP_001467660.1 CDS CCC13826_1711 NC_009802.1 1853575 1854378 D identified by match to protein family HMM PF01435; M48 family peptidase 1853575..1854378 Campylobacter concisus 13826 5596810 YP_001467661.1 CDS CCC13826_1712 NC_009802.1 1854381 1854863 D identified by match to protein family HMM PF00583; acetyltransferase 1854381..1854863 Campylobacter concisus 13826 5597214 YP_001467662.1 CDS CCC13826_1715 NC_009802.1 1855025 1856599 D identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter 1855025..1856599 Campylobacter concisus 13826 5597375 YP_001467663.1 CDS CCC13826_1714 NC_009802.1 1856596 1857108 R identified by glimmer; hypothetical protein complement(1856596..1857108) Campylobacter concisus 13826 5595768 YP_001467664.1 CDS CCC13826_1718 NC_009802.1 1859288 1860388 R identified by match to protein family HMM PF03929; PepSY-associated TM helix family protein complement(1859288..1860388) Campylobacter concisus 13826 5596088 YP_001467665.1 CDS CCC13826_1719 NC_009802.1 1860788 1860937 D identified by glimmer; hypothetical protein 1860788..1860937 Campylobacter concisus 13826 5596367 YP_001467666.1 CDS CCC13826_1720 NC_009802.1 1861182 1861589 R identified by match to protein family HMM PF08238; Sel1 repeat-containing protein complement(1861182..1861589) Campylobacter concisus 13826 5596288 YP_001467667.1 CDS CCC13826_1721 NC_009802.1 1861722 1862549 R identified by match to protein family HMM PF01061; ABC transporter complement(1861722..1862549) Campylobacter concisus 13826 5596297 YP_001467668.1 CDS CCC13826_1722 NC_009802.1 1862542 1863195 R identified by match to protein family HMM PF00005; methionine import ATP-binding protein MetN complement(1862542..1863195) Campylobacter concisus 13826 5596789 YP_001467669.1 CDS CCC13826_1723 NC_009802.1 1863205 1864104 R identified by match to protein family HMM PF00037; match to protein family HMM TIGR02163; NapH/MauN family ferredoxin-type protein complement(1863205..1864104) Campylobacter concisus 13826 5597665 YP_001467670.1 CDS CCC13826_1724 NC_009802.1 1864107 1864568 R hypothetical protein complement(1864107..1864568) Campylobacter concisus 13826 5596860 YP_001467671.1 CDS CCC13826_1725 NC_009802.1 1864565 1865116 R hypothetical protein complement(1864565..1865116) Campylobacter concisus 13826 5597134 YP_001467672.1 CDS CCC13826_1727 NC_009802.1 1865783 1867039 R nitrous oxidase accessory protein complement(1865783..1867039) Campylobacter concisus 13826 5596582 YP_001467673.1 CDS CCC13826_1728 NC_009802.1 1867032 1867787 R hypothetical protein complement(1867032..1867787) Campylobacter concisus 13826 5596519 YP_001467674.1 CDS CCC13826_1729 NC_009802.1 1867869 1870457 R identified by match to protein family HMM PF00116; methyl-accepting chemotaxis protein complement(1867869..1870457) Campylobacter concisus 13826 5596857 YP_001467675.1 CDS CCC13826_1730 NC_009802.1 1870470 1871288 R ATP-dependent protease La 1 complement(1870470..1871288) Campylobacter concisus 13826 5595875 YP_001467676.1 CDS moaC NC_009802.1 1871710 1872183 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1871710..1872183 Campylobacter concisus 13826 5596844 YP_001467677.1 CDS yviF NC_009802.1 1872158 1872424 D hypothetical protein 1872158..1872424 Campylobacter concisus 13826 5597105 YP_001467678.1 CDS CCC13826_1733 NC_009802.1 1872434 1873672 D identified by glimmer; hypothetical protein 1872434..1873672 Campylobacter concisus 13826 5596888 YP_001467679.1 CDS CCC13826_1734 NC_009802.1 1873742 1874536 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(1873742..1874536) Campylobacter concisus 13826 5595683 YP_001467680.1 CDS tkt NC_009802.1 1874596 1876506 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(1874596..1876506) Campylobacter concisus 13826 5596001 YP_001467681.1 CDS CCC13826_1736 NC_009802.1 1876614 1877513 R identified by match to protein family HMM PF00348; geranyltranstransferase (farnesyl-diphosphate synthase; FPP synthase) complement(1876614..1877513) Campylobacter concisus 13826 5597485 YP_001467682.1 CDS CCC13826_1737 NC_009802.1 1877510 1878619 R sigma 54 modulation protein/ribosomal protein S30EA complement(1877510..1878619) Campylobacter concisus 13826 5595636 YP_001467683.1 CDS CCC13826_1738 NC_009802.1 1878616 1878930 R identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein complement(1878616..1878930) Campylobacter concisus 13826 5596488 YP_001467684.1 CDS panD NC_009802.1 1878934 1879281 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(1878934..1879281) Campylobacter concisus 13826 5595660 YP_001467685.1 CDS murE NC_009802.1 1879284 1880567 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(1879284..1880567) Campylobacter concisus 13826 5596885 YP_001467686.1 CDS CCC13826_1741 NC_009802.1 1880545 1881099 R two-component sensor kinase CzcS complement(1880545..1881099) Campylobacter concisus 13826 5596806 YP_001467687.1 CDS CCC13826_1742 NC_009802.1 1881086 1881361 R identified by match to protein family HMM PF01106; hypothetical protein complement(1881086..1881361) Campylobacter concisus 13826 5596040 YP_001467688.1 CDS CCC13826_1743 NC_009802.1 1881498 1882418 R identified by match to protein family HMM PF04069; match to protein family HMM PF09084; nitrogenase cofactor biosynthesis protein NifB complement(1881498..1882418) Campylobacter concisus 13826 5595759 YP_001467689.1 CDS CCC13826_1745 NC_009802.1 1882494 1883186 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1882494..1883186) Campylobacter concisus 13826 5596865 YP_001467690.1 CDS modA NC_009802.1 1883183 1883932 R identified by match to protein family HMM PF00528; molybdenum ABC transporter solute-binding protein complement(1883183..1883932) Campylobacter concisus 13826 5597005 YP_001467691.1 CDS CCC13826_1747 NC_009802.1 1883929 1884540 R hypothetical protein complement(1883929..1884540) Campylobacter concisus 13826 5596723 YP_001467692.1 CDS CCC13826_1748 NC_009802.1 1884645 1885631 R identified by glimmer; hypothetical protein complement(1884645..1885631) Campylobacter concisus 13826 5597381 YP_001467693.1 CDS CCC13826_1749 NC_009802.1 1885633 1885749 R hypothetical protein complement(1885633..1885749) Campylobacter concisus 13826 5595824 YP_001467694.1 CDS rplQ NC_009802.1 1886540 1886839 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(1886540..1886839) Campylobacter concisus 13826 5596719 YP_001467695.1 CDS rpoA NC_009802.1 1886908 1887924 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(1886908..1887924) Campylobacter concisus 13826 5596373 YP_001467696.1 CDS rpsD NC_009802.1 1887939 1888565 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(1887939..1888565) Campylobacter concisus 13826 5596182 YP_001467697.1 CDS rpsK NC_009802.1 1888591 1888983 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(1888591..1888983) Campylobacter concisus 13826 5595728 YP_001467698.1 CDS rpsM NC_009802.1 1889006 1889374 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(1889006..1889374) Campylobacter concisus 13826 5597605 YP_001467699.1 CDS infA NC_009802.1 1889681 1889899 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1889681..1889899) Campylobacter concisus 13826 5597640 YP_001467700.1 CDS map NC_009802.1 1889932 1890690 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1889932..1890690) Campylobacter concisus 13826 5596509 YP_001467701.1 CDS secY NC_009802.1 1890692 1891750 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(1890692..1891750) Campylobacter concisus 13826 5596233 YP_001467702.1 CDS rplO NC_009802.1 1891954 1892355 R late assembly protein; 50S ribosomal protein L15 complement(1891954..1892355) Campylobacter concisus 13826 5597473 YP_001467703.1 CDS rpsE NC_009802.1 1892371 1892814 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(1892371..1892814) Campylobacter concisus 13826 5595935 YP_001467704.1 CDS rplR NC_009802.1 1892830 1893186 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(1892830..1893186) Campylobacter concisus 13826 5595903 YP_001467705.1 CDS rplF NC_009802.1 1893197 1893733 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(1893197..1893733) Campylobacter concisus 13826 5597653 YP_001467706.1 CDS rpsH NC_009802.1 1893931 1894326 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(1893931..1894326) Campylobacter concisus 13826 5597207 YP_001467707.1 CDS rpsN NC_009802.1 1894336 1894521 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(1894336..1894521) Campylobacter concisus 13826 5595880 YP_001467708.1 CDS rplE NC_009802.1 1894523 1895068 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(1894523..1895068) Campylobacter concisus 13826 5595952 YP_001467709.1 CDS rplX NC_009802.1 1895074 1895310 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(1895074..1895310) Campylobacter concisus 13826 5596448 YP_001467710.1 CDS rplN NC_009802.1 1895310 1895678 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(1895310..1895678) Campylobacter concisus 13826 5595856 YP_001467711.1 CDS rpsQ NC_009802.1 1895678 1895929 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(1895678..1895929) Campylobacter concisus 13826 5595618 YP_001467712.1 CDS rpmC NC_009802.1 1895931 1896125 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(1895931..1896125) Campylobacter concisus 13826 5596387 YP_001467713.1 CDS rplP NC_009802.1 1896112 1896537 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(1896112..1896537) Campylobacter concisus 13826 5596169 YP_001467714.1 CDS rpsC NC_009802.1 1896540 1897238 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(1896540..1897238) Campylobacter concisus 13826 5595917 YP_001467715.1 CDS rplV NC_009802.1 1897240 1897497 R identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 complement(1897240..1897497) Campylobacter concisus 13826 5595693 YP_001467716.1 CDS rpsS NC_009802.1 1897584 1897865 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(1897584..1897865) Campylobacter concisus 13826 5596680 YP_001467717.1 CDS rplB NC_009802.1 1897868 1898701 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(1897868..1898701) Campylobacter concisus 13826 5596391 YP_001467718.1 CDS rplW NC_009802.1 1898703 1898984 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(1898703..1898984) Campylobacter concisus 13826 5596884 YP_001467719.1 CDS rplD NC_009802.1 1898986 1899600 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(1898986..1899600) Campylobacter concisus 13826 5596972 YP_001467720.1 CDS rplC NC_009802.1 1899597 1900175 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(1899597..1900175) Campylobacter concisus 13826 5595637 YP_001467721.1 CDS rpsJ NC_009802.1 1900196 1900534 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(1900196..1900534) Campylobacter concisus 13826 5596685 YP_001467722.1 CDS CCC13826_0345 NC_009802.1 1900868 1901962 D hypothetical protein 1900868..1901962 Campylobacter concisus 13826 5596141 YP_001467723.1 CDS CCC13826_0344 NC_009802.1 1902040 1902894 D S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine biosynthesis protein QueA) 1902040..1902894 Campylobacter concisus 13826 5597498 YP_001467724.1 CDS rnhB NC_009802.1 1902894 1903448 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1902894..1903448 Campylobacter concisus 13826 5596628 YP_001467725.1 CDS CCC13826_0343 NC_009802.1 1903440 1905086 R identified by glimmer; hypothetical protein complement(1903440..1905086) Campylobacter concisus 13826 5596291 YP_001467726.1 CDS frr NC_009802.1 1905110 1905667 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(1905110..1905667) Campylobacter concisus 13826 5597142 YP_001467727.1 CDS CCC13826_0340 NC_009802.1 1905657 1906616 R identified by match to protein family HMM PF01522; polysaccharide deacetylase domain-containing protein complement(1905657..1906616) Campylobacter concisus 13826 5597461 YP_001467728.1 CDS CCC13826_0339 NC_009802.1 1906619 1906948 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; AraC family transcriptional regulator complement(1906619..1906948) Campylobacter concisus 13826 5597312 YP_001467729.1 CDS CCC13826_0338 NC_009802.1 1907011 1907394 R TMPpyrophosphorylase; TMP-PPase; thiamine-phosphate synthase; thiamine-phosphate pyrophosphorylase complement(1907011..1907394) Campylobacter concisus 13826 5597484 YP_001467730.1 CDS CCC13826_0337 NC_009802.1 1907387 1908085 R identified by match to protein family HMM PF01027; ferric receptor CfrA complement(1907387..1908085) Campylobacter concisus 13826 5595993 YP_001467731.1 CDS CCC13826_0336 NC_009802.1 1908258 1908902 D identified by match to protein family HMM PF00484; carbonate dehydratase 1908258..1908902 Campylobacter concisus 13826 5597271 YP_001467732.1 CDS CCC13826_0334 NC_009802.1 1910750 1910908 D aspartokinase (aspartate kinase) 1910750..1910908 Campylobacter concisus 13826 5597250 YP_001467733.1 CDS CCC13826_0333 NC_009802.1 1910953 1912047 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; GGDEF domain-containing protein 1910953..1912047 Campylobacter concisus 13826 5596702 YP_001467734.1 CDS CCC13826_0332 NC_009802.1 1912040 1913089 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; DNA polymerase III delta prime subunit HolB 1912040..1913089 Campylobacter concisus 13826 5596499 YP_001467735.1 CDS CCC13826_0331 NC_009802.1 1913115 1914407 R identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR00786; trap dicarboxylate transporter- dctm subunit complement(1913115..1914407) Campylobacter concisus 13826 5597467 YP_001467736.1 CDS CCC13826_0330 NC_009802.1 1914419 1914961 R identified by match to protein family HMM PF04290; TRAP transporter DctQ-like membrane protein complement(1914419..1914961) Campylobacter concisus 13826 5596403 YP_001467737.1 CDS CCC13826_0329 NC_009802.1 1914961 1915953 R identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787; C4-dicarboxylate-binding periplasmic protein complement(1914961..1915953) Campylobacter concisus 13826 5596123 YP_001467738.1 CDS CCC13826_0328 NC_009802.1 1916421 1917038 D identified by match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase 1916421..1917038 Campylobacter concisus 13826 5596552 YP_001467739.1 CDS patB NC_009802.1 1917917 1919083 R identified by match to protein family HMM PF00155; aminotransferase, class II complement(1917917..1919083) Campylobacter concisus 13826 5596392 YP_001467740.1 CDS CCC13826_0326 NC_009802.1 1919172 1919627 D septicolysin 1919172..1919627 Campylobacter concisus 13826 5597397 YP_001467741.1 CDS CCC13826_0325 NC_009802.1 1919631 1919759 R identified by glimmer; hypothetical protein complement(1919631..1919759) Campylobacter concisus 13826 5596030 YP_001467742.1 CDS CCC13826_0324 NC_009802.1 1919846 1920988 D identified by match to protein family HMM PF01053; Cys/Met metabolism PLP-dependent enzyme superfamily protein 1919846..1920988 Campylobacter concisus 13826 5597646 YP_001467743.1 CDS CCC13826_0323 NC_009802.1 1920998 1921522 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; thiol peroxidase (scavengase P20) 1920998..1921522 Campylobacter concisus 13826 5597620 YP_001467744.1 CDS CCC13826_0322 NC_009802.1 1921528 1921944 R identified by glimmer; hypothetical protein complement(1921528..1921944) Campylobacter concisus 13826 5597325 YP_001467745.1 CDS rpsO NC_009802.1 1923132 1924352 D identified by match to protein family HMM PF00589; 30S ribosomal protein S15 1923132..1924352 Campylobacter concisus 13826 5596818 YP_001467746.1 CDS CCC13826_0314 NC_009802.1 1924417 1925019 D identified by glimmer; hypothetical protein 1924417..1925019 Campylobacter concisus 13826 5596453 YP_001467747.1 CDS CCC13826_0313 NC_009802.1 1925316 1925528 D identified by match to protein family HMM PF05930; flagellar biosynthesis protein FlhA 1925316..1925528 Campylobacter concisus 13826 5596273 YP_001467748.1 CDS CCC13826_0312 NC_009802.1 1925525 1925794 D identified by glimmer; hypothetical protein 1925525..1925794 Campylobacter concisus 13826 5596656 YP_001467749.1 CDS CCC13826_0311 NC_009802.1 1925799 1926059 D hypothetical protein 1925799..1926059 Campylobacter concisus 13826 5596354 YP_001467750.1 CDS CCC13826_0310 NC_009802.1 1926052 1926294 D beta-lactamase HcpC (cysteine-richprotein C) 1926052..1926294 Campylobacter concisus 13826 5597539 YP_001467751.1 CDS CCC13826_0309 NC_009802.1 1926344 1927102 D aspartate carbamoyltransferase (aspartatetranscarbamylase; ATCase) 1926344..1927102 Campylobacter concisus 13826 5595644 YP_001467752.1 CDS CCC13826_0308 NC_009802.1 1928163 1928384 R dihydroorotase (DHOase) complement(1928163..1928384) Campylobacter concisus 13826 5596645 YP_001467753.1 CDS CCC13826_0307 NC_009802.1 1928549 1928893 D hypothetical protein 1928549..1928893 Campylobacter concisus 13826 5595834 YP_001467754.1 CDS CCC13826_0306 NC_009802.1 1928890 1929126 D identified by glimmer; hypothetical protein 1928890..1929126 Campylobacter concisus 13826 5595878 YP_001467755.1 CDS CCC13826_0305 NC_009802.1 1929123 1929461 D identified by glimmer; hypothetical protein 1929123..1929461 Campylobacter concisus 13826 5596174 YP_001467756.1 CDS CCC13826_0304 NC_009802.1 1929738 1929887 D heat-inducible transcription repressor HrcA 1929738..1929887 Campylobacter concisus 13826 5595844 YP_001467757.1 CDS CCC13826_0303 NC_009802.1 1929875 1930381 D co-chaperone protein GrpE 1929875..1930381 Campylobacter concisus 13826 5596386 YP_001467758.1 CDS dnaK NC_009802.1 1930335 1931789 D identified by match to protein family HMM PF03237; match to protein family HMM TIGR01630; chaperone and heat shock protein 70 1930335..1931789 Campylobacter concisus 13826 5595919 YP_001467759.1 CDS CCC13826_0301 NC_009802.1 1931834 1932058 D metallo-beta-lactamase family protein 1931834..1932058 Campylobacter concisus 13826 5595734 YP_001467760.1 CDS CCC13826_0300 NC_009802.1 1932097 1932318 D NH(3)-dependent NAD(+) synthetase 1932097..1932318 Campylobacter concisus 13826 5596974 YP_001467761.1 CDS CCC13826_0299 NC_009802.1 1932752 1933492 D spore coat polysaccharide biosynthesis protein spsC-like protein 1932752..1933492 Campylobacter concisus 13826 5597211 YP_001467762.1 CDS CCC13826_0298 NC_009802.1 1933574 1934698 D identified by match to protein family HMM PF03929; PepSY-associated TM helix family protein 1933574..1934698 Campylobacter concisus 13826 5597712 YP_001467763.1 CDS nrdF NC_009802.1 1934770 1935792 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 1934770..1935792 Campylobacter concisus 13826 5596782 YP_001467764.1 CDS CCC13826_0296 NC_009802.1 1935782 1936273 D hypothetical protein 1935782..1936273 Campylobacter concisus 13826 5597540 YP_001467765.1 CDS CCC13826_0295 NC_009802.1 1936274 1937041 D identified by match to protein family HMM PF00795; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1936274..1937041 Campylobacter concisus 13826 5595984 YP_001467766.1 CDS pcm NC_009802.1 1937084 1937734 D catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 1937084..1937734 Campylobacter concisus 13826 5595689 YP_001467767.1 CDS CCC13826_0293 NC_009802.1 1937752 1938234 R identified by glimmer; hypothetical protein complement(1937752..1938234) Campylobacter concisus 13826 5596742 YP_001467768.1 CDS CCC13826_0292 NC_009802.1 1938364 1938948 R hypothetical protein complement(1938364..1938948) Campylobacter concisus 13826 5595664 YP_001467769.1 CDS CCC13826_0291 NC_009802.1 1939117 1939335 D hypothetical protein 1939117..1939335 Campylobacter concisus 13826 5596331 YP_001467770.1 CDS CCC13826_0290 NC_009802.1 1939362 1939655 R polyphosphate kinase 2 complement(1939362..1939655) Campylobacter concisus 13826 5596150 YP_001467771.1 CDS CCC13826_0289 NC_009802.1 1939690 1939812 R hypothetical protein complement(1939690..1939812) Campylobacter concisus 13826 5597561 YP_001467772.1 CDS CCC13826_0288 NC_009802.1 1939851 1940438 R outer membrane protein complement(1939851..1940438) Campylobacter concisus 13826 5597470 YP_001467773.1 CDS recJ NC_009802.1 1940598 1942205 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ complement(1940598..1942205) Campylobacter concisus 13826 5595887 YP_001467774.1 CDS CCC13826_0909 NC_009802.1 1942162 1942284 R identified by glimmer; hypothetical protein complement(1942162..1942284) Campylobacter concisus 13826 5597081 YP_001467775.1 CDS pyrG NC_009802.1 1942487 1944121 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(1942487..1944121) Campylobacter concisus 13826 5597181 YP_001467776.1 CDS CCC13826_0907 NC_009802.1 1944211 1944381 R transglutaminase complement(1944211..1944381) Campylobacter concisus 13826 5597656 YP_001467777.1 CDS CCC13826_0906 NC_009802.1 1944465 1946000 D identified by match to protein family HMM PF01654; ubiquinol oxidase 1944465..1946000 Campylobacter concisus 13826 5596795 YP_001467778.1 CDS cydB NC_009802.1 1945993 1947117 D identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome D ubiquinol oxidase subunit II 1945993..1947117 Campylobacter concisus 13826 5596015 YP_001467779.1 CDS CCC13826_0904 NC_009802.1 1947225 1947893 R hypothetical protein complement(1947225..1947893) Campylobacter concisus 13826 5595808 YP_001467780.1 CDS CCC13826_0903 NC_009802.1 1948119 1949228 D identified by glimmer; hypothetical protein 1948119..1949228 Campylobacter concisus 13826 5596470 YP_001467781.1 CDS CCC13826_0902 NC_009802.1 1949239 1949799 R foldase protein PrsA complement(1949239..1949799) Campylobacter concisus 13826 5595764 YP_001467782.1 CDS CCC13826_0901 NC_009802.1 1950110 1951876 D identified by match to protein family HMM PF05935; fructose-bisphosphate aldolase 1950110..1951876 Campylobacter concisus 13826 5596471 YP_001467783.1 CDS CCC13826_0900 NC_009802.1 1951913 1952263 R hypothetical protein complement(1951913..1952263) Campylobacter concisus 13826 5595710 YP_001467784.1 CDS CCC13826_0899 NC_009802.1 1952330 1967572 R large repetitive protein complement(1952330..1967572) Campylobacter concisus 13826 5596677 YP_001467785.1 CDS CCC13826_0016 NC_009802.1 1972434 1973840 R identified by glimmer; hypothetical protein complement(1972434..1973840) Campylobacter concisus 13826 5596938 YP_001467786.1 CDS CCC13826_0015 NC_009802.1 1974013 1977234 R identified by glimmer; hypothetical protein complement(1974013..1977234) Campylobacter concisus 13826 5596809 YP_001467787.1 CDS CCC13826_0014 NC_009802.1 1977341 1977481 D identified by glimmer; hypothetical protein 1977341..1977481 Campylobacter concisus 13826 5595667 YP_001467788.1 CDS CCC13826_0013 NC_009802.1 1977596 1978630 D identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; phage integrase 1977596..1978630 Campylobacter concisus 13826 5597594 YP_001467789.1 CDS ilvD NC_009802.1 1978649 1980397 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1978649..1980397 Campylobacter concisus 13826 5595707 YP_001467790.1 CDS CCC13826_0011 NC_009802.1 1980453 1981187 R identified by match to protein family HMM PF08543; phosphomethylpyrimidine kinase superfamily protein complement(1980453..1981187) Campylobacter concisus 13826 5597054 YP_001467791.1 CDS CCC13826_0010 NC_009802.1 1981273 1981809 R hypothetical protein complement(1981273..1981809) Campylobacter concisus 13826 5597164 YP_001467792.1 CDS CCC13826_0008 NC_009802.1 1981886 1982002 D identified by glimmer; hypothetical protein 1981886..1982002 Campylobacter concisus 13826 5597144 YP_001467793.1 CDS CCC13826_0007 NC_009802.1 1986226 1989171 R lipoprotein complement(1986226..1989171) Campylobacter concisus 13826 5596160 YP_001467794.1 CDS CCC13826_0006 NC_009802.1 1989443 1989625 R identified by glimmer; hypothetical protein complement(1989443..1989625) Campylobacter concisus 13826 5595974 YP_001467795.1 CDS CCC13826_0005 NC_009802.1 1989686 1990375 R identified by match to protein family HMM PF00072; response regulator receiver domain-containing protein complement(1989686..1990375) Campylobacter concisus 13826 5595986 YP_001467796.1 CDS CCC13826_0004 NC_009802.1 1990379 1992028 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; His kinase A complement(1990379..1992028) Campylobacter concisus 13826 5596848 YP_001467797.1 CDS ttrA NC_009802.1 1992076 1992696 R disulfide oxidoreductase complement(1992076..1992696) Campylobacter concisus 13826 5595653 YP_001467798.1 CDS xerC NC_009802.1 1992705 1993361 R integrase/recombinase complement(1992705..1993361) Campylobacter concisus 13826 5596669 YP_001467799.1 CDS CCC13826_0001 NC_009802.1 1993500 1993769 R identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385; addiction module antitoxin complement(1993500..1993769) Campylobacter concisus 13826 5595777 YP_001467800.1 CDS CCC13826_2334 NC_009802.1 1993762 1993959 R hypothetical protein complement(1993762..1993959) Campylobacter concisus 13826 5595741 YP_001467801.1 CDS CCC13826_1910 NC_009802.1 1994096 1994740 D identified by match to protein family HMM PF00301; match to protein family HMM PF02915; match to protein family HMM PF06397; match to protein family HMM TIGR00319; enolase (2-phosphoglycerate dehydratase; 2-phospho-D-glycerate hydro-lyase) 1994096..1994740 Campylobacter concisus 13826 5596400 YP_001467802.1 CDS CCC13826_1909 NC_009802.1 1994853 1995143 D hypothetical protein 1994853..1995143 Campylobacter concisus 13826 5595839 YP_001467803.1 CDS CCC13826_1908 NC_009802.1 1995182 1995412 R hypothetical protein complement(1995182..1995412) Campylobacter concisus 13826 5596239 YP_001467804.1 CDS CCC13826_1907 NC_009802.1 1995409 1995969 R identified by match to protein family HMM PF02525; general stress protein 14 (GSP14) complement(1995409..1995969) Campylobacter concisus 13826 5595832 YP_001467805.1 CDS CCC13826_1906 NC_009802.1 1995985 1997529 R identified by match to protein family HMM PF07519; flagellar biosynthetic protein FliQ complement(1995985..1997529) Campylobacter concisus 13826 5596792 YP_001467806.1 CDS CCC13826_1905 NC_009802.1 1997563 1998243 R identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein complement(1997563..1998243) Campylobacter concisus 13826 5597315 YP_001467807.1 CDS CCC13826_1904 NC_009802.1 1998257 1998766 R identified by glimmer; hypothetical protein complement(1998257..1998766) Campylobacter concisus 13826 5596304 YP_001467808.1 CDS pncB NC_009802.1 1998817 2000253 R nicotinate phosphoribosyltransferase complement(1998817..2000253) Campylobacter concisus 13826 5595960 YP_001467809.1 CDS CCC13826_1902 NC_009802.1 2000293 2001063 R identified by match to protein family HMM PF00106; molybdenum ABC transporter periplasmic binding protein complement(2000293..2001063) Campylobacter concisus 13826 5596014 YP_001467810.1 CDS CCC13826_1901 NC_009802.1 2001060 2001701 R oxidoreductase htatip2 complement(2001060..2001701) Campylobacter concisus 13826 5595639 YP_001467811.1 CDS fabE NC_009802.1 2001731 2002876 R identified by match to protein family HMM PF00465; biotin carboxyl carrier protein complement(2001731..2002876) Campylobacter concisus 13826 5597084 YP_001467812.1 CDS CCC13826_1899 NC_009802.1 2002961 2003665 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR02495; anaerobic ribonucleoside-triphosphate reductase activating protein complement(2002961..2003665) Campylobacter concisus 13826 5596486 YP_001467813.1 CDS nrdD NC_009802.1 2003914 2006016 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(2003914..2006016) Campylobacter concisus 13826 5597634 YP_001467814.1 CDS CCC13826_1896 NC_009802.1 2006318 2006761 D histidine biosynthesis bifunctional protein hisIE 2006318..2006761 Campylobacter concisus 13826 5597427 YP_001467815.1 CDS CCC13826_1895 NC_009802.1 2006823 2009198 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(2006823..2009198) Campylobacter concisus 13826 5597217 YP_001467816.1 CDS purB NC_009802.1 2009550 2010881 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2009550..2010881) Campylobacter concisus 13826 5596612 YP_001467817.1 CDS CCC13826_1893 NC_009802.1 2011069 2011992 D identified by match to protein family HMM PF00849; disulfide isomerase 2011069..2011992 Campylobacter concisus 13826 5595909 YP_001467818.1 CDS CCC13826_1892 NC_009802.1 2012286 2013431 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(2012286..2013431) Campylobacter concisus 13826 5597106 YP_001467819.1 CDS bcp NC_009802.1 2013428 2014108 R bacterioferritin comigratory protein Bcp complement(2013428..2014108) Campylobacter concisus 13826 5596557 YP_001467820.1 CDS hisF NC_009802.1 2014108 2014863 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(2014108..2014863) Campylobacter concisus 13826 5595955 YP_001467821.1 CDS CCC13826_1889 NC_009802.1 2014866 2018144 R identified by glimmer; hypothetical protein complement(2014866..2018144) Campylobacter concisus 13826 5597598 YP_001467822.1 CDS ksgA NC_009802.1 2018251 2019093 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 2018251..2019093 Campylobacter concisus 13826 5597125 YP_001467823.1 CDS CCC13826_1887 NC_009802.1 2019059 2021212 D identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; peptide ABC transporter periplasmic peptide-binding protein 2019059..2021212 Campylobacter concisus 13826 5597196 YP_001467824.1 CDS CCC13826_1886 NC_009802.1 2021222 2022175 D identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; arabinose 5-phosphate isomerase 2021222..2022175 Campylobacter concisus 13826 5596984 YP_001467825.1 CDS CCC13826_1885 NC_009802.1 2022177 2022950 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; peptide ABC transporter permease 2022177..2022950 Campylobacter concisus 13826 5597670 YP_001467826.1 CDS CCC13826_1883 NC_009802.1 2023698 2024207 R hypothetical protein complement(2023698..2024207) Campylobacter concisus 13826 5595700 YP_001467827.1 CDS CCC13826_1882 NC_009802.1 2024204 2025157 R hypothetical protein complement(2024204..2025157) Campylobacter concisus 13826 5596905 YP_001467828.1 CDS CCC13826_1881 NC_009802.1 2025154 2025822 R identified by match to protein family HMM PF00005; (3R)-hydroxymyristoyl-ACP dehydratase complement(2025154..2025822) Campylobacter concisus 13826 5596711 YP_001467829.1 CDS CCC13826_1880 NC_009802.1 2025819 2026928 R UDP-N-acetylglucosamine acyltransferase; identified by match to protein family HMM PF02687; acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase complement(2025819..2026928) Campylobacter concisus 13826 5596772 YP_001467830.1 CDS CCC13826_1879 NC_009802.1 2026918 2027103 R hypothetical protein complement(2026918..2027103) Campylobacter concisus 13826 5597216 YP_001467831.1 CDS CCC13826_1878 NC_009802.1 2027105 2027563 R NosL protein complement(2027105..2027563) Campylobacter concisus 13826 5596337 YP_001467832.1 CDS CCC13826_1877 NC_009802.1 2027560 2028102 R hypothetical protein complement(2027560..2028102) Campylobacter concisus 13826 5595705 YP_001467833.1 CDS CCC13826_1876 NC_009802.1 2028102 2028923 R identified by match to protein family HMM PF08238; carbamoyl-phosphate synthase large subunit complement(2028102..2028923) Campylobacter concisus 13826 5596986 YP_001467834.1 CDS CCC13826_1875 NC_009802.1 2028932 2031553 R identified by match to protein family HMM PF01578; NAD(FAD)-utilizing dehydrogenase complement(2028932..2031553) Campylobacter concisus 13826 5596036 YP_001467835.1 CDS CCC13826_1874 NC_009802.1 2031567 2032496 R identified by match to protein family HMM PF03916; polysulphide reductase, NrfD complement(2031567..2032496) Campylobacter concisus 13826 5596007 YP_001467836.1 CDS CCC13826_1873 NC_009802.1 2032498 2033181 R identified by match to protein family HMM PF00037; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein complement(2032498..2033181) Campylobacter concisus 13826 5595982 YP_001467837.1 CDS CCC13826_1872 NC_009802.1 2033189 2033947 R identified by match to protein family HMM PF00254; match to protein family HMM PF01346; adenylosuccinate synthetase (imp--aspartate ligase; adss; ampsase) complement(2033189..2033947) Campylobacter concisus 13826 5597697 YP_001467838.1 CDS CCC13826_1871 NC_009802.1 2033992 2036058 R tRNA synthetase, class II complement(2033992..2036058) Campylobacter concisus 13826 5597337 YP_001467839.1 CDS CCC13826_1870 NC_009802.1 2036154 2037581 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; hypothetical protein complement(2036154..2037581) Campylobacter concisus 13826 5597346 YP_001467840.1 CDS frp NC_009802.1 2037571 2038260 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; NAD(P)H-flavin oxidoreductase complement(2037571..2038260) Campylobacter concisus 13826 5596638 YP_001467841.1 CDS pyrE NC_009802.1 2040340 2040948 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(2040340..2040948) Campylobacter concisus 13826 5597569 YP_001467842.1 CDS CCC13826_1865 NC_009802.1 2041068 2042435 D identified by match to protein family HMM PF03553; match to protein family HMM PF03600; citrate transporter 2041068..2042435 Campylobacter concisus 13826 5596787 YP_001467843.1 CDS CCC13826_1864 NC_009802.1 2042474 2042764 D formate dehydrogenase, cytochrome B subunit 2042474..2042764 Campylobacter concisus 13826 5596459 YP_001467844.1 CDS CCC13826_1863 NC_009802.1 2042764 2042934 D DJ-1/PfpI family protein 2042764..2042934 Campylobacter concisus 13826 5596244 YP_001467845.1 CDS flgE NC_009802.1 2043153 2045597 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 2043153..2045597 Campylobacter concisus 13826 5597166 YP_001467846.1 CDS thyX NC_009802.1 2045657 2046313 D flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 2045657..2046313 Campylobacter concisus 13826 5596194 YP_001467847.1 CDS CCC13826_1860 NC_009802.1 2046367 2046642 R identified by match to protein family HMM TIGR02385; addiction module antitoxin complement(2046367..2046642) Campylobacter concisus 13826 5595757 YP_001467848.1 CDS CCC13826_1859 NC_009802.1 2046642 2046872 R molybdopterin converting factor, subunit 2 complement(2046642..2046872) Campylobacter concisus 13826 5596684 YP_001467849.1 CDS CCC13826_1858 NC_009802.1 2046939 2048045 R identified by match to protein family HMM PF02086; D12 class N6 adenine-specific DNA methyltransferase superfamily protein complement(2046939..2048045) Campylobacter concisus 13826 5597010 YP_001467850.1 CDS luxS NC_009802.1 2048047 2048562 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(2048047..2048562) Campylobacter concisus 13826 5597701 YP_001467851.1 CDS CCC13826_1856 NC_009802.1 2048669 2050633 R identified by match to protein family HMM PF00015; match to protein family HMM PF02743; acyl-CoA hydrolase complement(2048669..2050633) Campylobacter concisus 13826 5596108 YP_001467852.1 CDS CCC13826_1855 NC_009802.1 2050700 2051389 R identified by match to protein family HMM PF03473; mosc domain-containing protein complement(2050700..2051389) Campylobacter concisus 13826 5595718 YP_001467853.1 CDS ruvC NC_009802.1 2051406 2051879 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(2051406..2051879) Campylobacter concisus 13826 5596435 CCC13826_2208 tRNA CCC13826_2208 NC_009802.1 20723 20800 D tRNA-Val 20723..20800 Campylobacter concisus 13826 5597296 CCC13826_2209 tRNA CCC13826_2209 NC_009802.1 72257 72333 D tRNA-Glu 72257..72333 Campylobacter concisus 13826 5597403 CCC13826_2210 tRNA CCC13826_2210 NC_009802.1 77189 77266 D tRNA-Pro 77189..77266 Campylobacter concisus 13826 5596625 CCC13826_2211 tRNA CCC13826_2211 NC_009802.1 77275 77353 D tRNA-His 77275..77353 Campylobacter concisus 13826 5596565 CCC13826_2212 tRNA CCC13826_2212 NC_009802.1 77359 77435 D tRNA-Arg 77359..77435 Campylobacter concisus 13826 5596920 CCC13826_2213 tRNA CCC13826_2213 NC_009802.1 77450 77528 D tRNA-Arg 77450..77528 Campylobacter concisus 13826 5597444 CCC13826_2214 tRNA CCC13826_2214 NC_009802.1 77541 77627 D tRNA-Leu 77541..77627 Campylobacter concisus 13826 5596162 CCC13826_2216 tRNA CCC13826_2216 NC_009802.1 197393 197470 D tRNA-Lys 197393..197470 Campylobacter concisus 13826 5597354 CCC13826_2217 tRNA CCC13826_2217 NC_009802.1 197482 197559 D tRNA-Glu 197482..197559 Campylobacter concisus 13826 5596390 CCC13826_2218 tRNA CCC13826_2218 NC_009802.1 197574 197649 D tRNA-Val 197574..197649 Campylobacter concisus 13826 5597364 CCC13826_2219 tRNA CCC13826_2219 NC_009802.1 197660 197738 D tRNA-Asp 197660..197738 Campylobacter concisus 13826 5596328 CCC13826_2220 tRNA CCC13826_2220 NC_009802.1 197854 197931 D tRNA-Lys 197854..197931 Campylobacter concisus 13826 5597413 CCC13826_2221 tRNA CCC13826_2221 NC_009802.1 197936 198012 D tRNA-Glu 197936..198012 Campylobacter concisus 13826 5596671 CCC13826_2225 tRNA CCC13826_2225 NC_009802.1 382480 382558 R tRNA-Met complement(382480..382558) Campylobacter concisus 13826 5597666 CCC13826_2227 tRNA CCC13826_2227 NC_009802.1 483633 483719 R tRNA-Leu complement(483633..483719) Campylobacter concisus 13826 5595726 CCC13826_2230 tRNA CCC13826_2230 NC_009802.1 655734 655809 D tRNA-Thr 655734..655809 Campylobacter concisus 13826 5596533 CCC13826_2231 tRNA CCC13826_2231 NC_009802.1 655862 655946 D tRNA-Tyr 655862..655946 Campylobacter concisus 13826 5595877 CCC13826_2232 tRNA CCC13826_2232 NC_009802.1 655954 656030 D tRNA-Gly 655954..656030 Campylobacter concisus 13826 5596455 CCC13826_2233 tRNA CCC13826_2233 NC_009802.1 656155 656229 D tRNA-Thr 656155..656229 Campylobacter concisus 13826 5597447 CCC13826_2234 tRNA CCC13826_2234 NC_009802.1 657732 657809 D tRNA-Trp 657732..657809 Campylobacter concisus 13826 5596966 CCC13826_2235 tRNA CCC13826_2235 NC_009802.1 675901 675979 D tRNA-Arg 675901..675979 Campylobacter concisus 13826 5597460 CCC13826_2237 tRNA CCC13826_2237 NC_009802.1 710213 710289 D tRNA-Ile 710213..710289 Campylobacter concisus 13826 5596102 CCC13826_2238 tRNA CCC13826_2238 NC_009802.1 710301 710378 D tRNA-Ala 710301..710378 Campylobacter concisus 13826 5596198 CCC13826_2240 tRNA CCC13826_2240 NC_009802.1 715982 716060 D tRNA-Arg 715982..716060 Campylobacter concisus 13826 5597495 CCC13826_2245 tRNA CCC13826_2245 NC_009802.1 929659 929745 R tRNA-Leu complement(929659..929745) Campylobacter concisus 13826 5595696 CCC13826_2250 tRNA CCC13826_2250 NC_009802.1 946948 947024 R tRNA-Met complement(946948..947024) Campylobacter concisus 13826 5597343 CCC13826_2251 tRNA CCC13826_2251 NC_009802.1 947051 947125 R tRNA-Gln complement(947051..947125) Campylobacter concisus 13826 5597530 CCC13826_2253 tRNA CCC13826_2253 NC_009802.1 1005188 1005262 D tRNA-Gly 1005188..1005262 Campylobacter concisus 13826 5596360 CCC13826_2257 tRNA CCC13826_2257 NC_009802.1 1086074 1086151 R tRNA-Ala complement(1086074..1086151) Campylobacter concisus 13826 5595889 CCC13826_2258 tRNA CCC13826_2258 NC_009802.1 1086163 1086239 R tRNA-Ile complement(1086163..1086239) Campylobacter concisus 13826 5596369 CCC13826_2259 tRNA CCC13826_2259 NC_009802.1 1138645 1138723 R tRNA-Asp complement(1138645..1138723) Campylobacter concisus 13826 5596457 CCC13826_2260 tRNA CCC13826_2260 NC_009802.1 1138735 1138810 R tRNA-Val complement(1138735..1138810) Campylobacter concisus 13826 5596171 CCC13826_2261 tRNA CCC13826_2261 NC_009802.1 1138827 1138904 R tRNA-Glu complement(1138827..1138904) Campylobacter concisus 13826 5597585 CCC13826_2262 tRNA CCC13826_2262 NC_009802.1 1138916 1138993 R tRNA-Lys complement(1138916..1138993) Campylobacter concisus 13826 5596706 CCC13826_2266 tRNA CCC13826_2266 NC_009802.1 1338061 1338139 D tRNA-Met 1338061..1338139 Campylobacter concisus 13826 5596487 CCC13826_2267 tRNA CCC13826_2267 NC_009802.1 1348673 1348749 R tRNA-Asn complement(1348673..1348749) Campylobacter concisus 13826 5597109 CCC13826_2270 tRNA CCC13826_2270 NC_009802.1 1582111 1582188 D tRNA-Phe 1582111..1582188 Campylobacter concisus 13826 5596054 CCC13826_2271 tRNA CCC13826_2271 NC_009802.1 1582217 1582309 D tRNA-Ser 1582217..1582309 Campylobacter concisus 13826 5596296 CCC13826_2321 tRNA CCC13826_2321 NC_009802.1 1836060 1836137 R tRNA-Ala complement(1836060..1836137) Campylobacter concisus 13826 5597339 CCC13826_2322 tRNA CCC13826_2322 NC_009802.1 1836149 1836225 R tRNA-Ile complement(1836149..1836225) Campylobacter concisus 13826 5597424 CCC13826_2323 tRNA CCC13826_2323 NC_009802.1 1854906 1854995 D tRNA-Ser 1854906..1854995 Campylobacter concisus 13826 5596643 CCC13826_2328 tRNA CCC13826_2328 NC_009802.1 1922174 1922265 R tRNA-Ser complement(1922174..1922265) Campylobacter concisus 13826 5597275 CCC13826_2329 tRNA CCC13826_2329 NC_009802.1 1922510 1922583 R tRNA-Cys complement(1922510..1922583) Campylobacter concisus 13826 5597157 CCC13826_2330 tRNA CCC13826_2330 NC_009802.1 1922590 1922678 R tRNA-Leu complement(1922590..1922678) Campylobacter concisus 13826 5596627 CCC13826_2331 tRNA CCC13826_2331 NC_009802.1 1922687 1922761 R tRNA-Gly complement(1922687..1922761) Campylobacter concisus 13826 5596845 CCC13826_2332 tRNA CCC13826_2332 NC_009802.1 1922864 1922941 D tRNA-Ala 1922864..1922941 Campylobacter concisus 13826 5596264 CCC13826_2336 rRNA rrs NC_009802.1 708608 710065 D 16S ribosomal RNA 708608..710065 Campylobacter concisus 13826 5597493 CCC13826_2337 rRNA rrl NC_009802.1 710815 713702 D 23S ribosomal RNA 710815..713702 Campylobacter concisus 13826 5596616 CCC13826_2239 rRNA rrf NC_009802.1 713848 713966 D 5S ribosomal RNA 713848..713966 Campylobacter concisus 13826 5597087 CCC13826_2256 rRNA rrf NC_009802.1 1082594 1082712 R 5S ribosomal RNA complement(1082594..1082712) Campylobacter concisus 13826 5597584 CCC13826_2338 rRNA rrl NC_009802.1 1082858 1085745 R 23S ribosomal RNA complement(1082858..1085745) Campylobacter concisus 13826 5597326 CCC13826_2339 rRNA rrs NC_009802.1 1086387 1087844 R 16S ribosomal RNA complement(1086387..1087844) Campylobacter concisus 13826 5596668 CCC13826_2320 rRNA rrf NC_009802.1 1832580 1832698 R 5S ribosomal RNA complement(1832580..1832698) Campylobacter concisus 13826 5595870 CCC13826_2341 rRNA rrl NC_009802.1 1832844 1835731 R 23S ribosomal RNA complement(1832844..1835731) Campylobacter concisus 13826 5596039 CCC13826_2342 rRNA rrs NC_009802.1 1836373 1837830 R 16S ribosomal RNA complement(1836373..1837830) Campylobacter concisus 13826 5596528