; retrieve-seq -v -org Campylobacter_jejuni_doylei_269_97_uid58671 -all -type downstream -feattype CDS -from 0 -to -2 -format wc -nocomment -label id,ctg,reg_left,reg_right,orf_strand -o /software/CC/bio/opt/rsat/rsa-tools//public_html/data/genomes/Campylobacter_jejuni_doylei_269_97_uid58671/genome/Campylobacter_jejuni_doylei_269_97_uid58671_stop_codons.wc
; organism      	Campylobacter_jejuni_doylei_269_97_uid58671
; sequence type 	downstream
; feature type  	cds
; Output format 	wc
; Line width    	60
; relative coordinates
;        from    -2
;        to      0
;        size    3
; Queries       	1731
;
YP_001397274.1|NC_009707.1|1321|1323|D	\TAG\
YP_001397275.1|NC_009707.1|2548|2550|D	\TAA\
YP_001397276.1|NC_009707.1|4886|4888|D	\TAA\
YP_001397277.1|NC_009707.1|4936|4938|R	\TAA\
YP_001397278.1|NC_009707.1|6579|6581|R	\TGA\
YP_001397279.1|NC_009707.1|8468|8470|D	\TAA\
YP_001397280.1|NC_009707.1|13090|13092|D	\TAA\
YP_001397281.1|NC_009707.1|14803|14805|D	\TAG\
YP_001397282.1|NC_009707.1|16265|16267|D	\TAA\
YP_001397283.1|NC_009707.1|16268|16270|R	\TGA\
YP_001397284.1|NC_009707.1|16876|16878|R	\TAA\
YP_001397285.1|NC_009707.1|17181|17183|R	\TAA\
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YP_001397287.1|NC_009707.1|20162|20164|R	\TAA\
YP_001397288.1|NC_009707.1|22137|22139|D	\TAG\
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YP_001397290.1|NC_009707.1|23698|23700|R	\TAA\
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YP_001397301.1|NC_009707.1|43186|43188|D	\TAA\
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YP_001397314.1|NC_009707.1|67003|67005|D	\TAA\
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YP_001397344.1|NC_009707.1|99503|99505|D	\TAG\
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YP_001397348.1|NC_009707.1|106280|106282|D	\TAA\
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YP_001397362.1|NC_009707.1|117625|117627|D	\TAA\
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YP_001397364.1|NC_009707.1|118577|118579|D	\TAA\
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YP_001397414.1|NC_009707.1|164031|164033|R	\TAA\
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YP_001397420.1|NC_009707.1|167820|167822|R	\TAG\
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YP_001397422.1|NC_009707.1|168820|168822|R	\TAA\
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YP_001397428.1|NC_009707.1|174666|174668|R	\TAG\
YP_001397429.1|NC_009707.1|175558|175560|R	\TAA\
YP_001397430.1|NC_009707.1|177174|177176|R	\TAA\
YP_001397431.1|NC_009707.1|179693|179695|D	\TAG\
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YP_001397468.1|NC_009707.1|220893|220895|R	\TAA\
YP_001397469.1|NC_009707.1|221874|221876|R	\TAA\
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YP_001397475.1|NC_009707.1|228562|228564|R	\TGA\
YP_001397476.1|NC_009707.1|229856|229858|R	\TAA\
YP_001397477.1|NC_009707.1|230596|230598|D	\TAA\
YP_001397478.1|NC_009707.1|230837|230839|D	\TAA\
YP_001397479.1|NC_009707.1|231987|231989|D	\TAA\
YP_001397480.1|NC_009707.1|232010|232012|R	\TAA\
YP_001397481.1|NC_009707.1|234709|234711|D	\TAG\
YP_001397482.1|NC_009707.1|237090|237092|R	\TAA\
YP_001397483.1|NC_009707.1|239709|239711|R	\TAA\
YP_001397484.1|NC_009707.1|240893|240895|D	\TAA\
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YP_001397486.1|NC_009707.1|241423|241425|R	\TAA\
YP_001397487.1|NC_009707.1|243330|243332|D	\TAA\
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YP_001397489.1|NC_009707.1|244519|244521|D	\TAA\
YP_001397490.1|NC_009707.1|245097|245099|R	\TAA\
YP_001397491.1|NC_009707.1|245856|245858|R	\TAG\
YP_001397492.1|NC_009707.1|247658|247660|R	\TGA\
YP_001397493.1|NC_009707.1|250729|250731|D	\TAG\
YP_001397494.1|NC_009707.1|250728|250730|R	\TAA\
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YP_001397496.1|NC_009707.1|252829|252831|R	\TAA\
YP_001397497.1|NC_009707.1|255300|255302|R	\TAA\
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YP_001397499.1|NC_009707.1|256624|256626|R	\TAA\
YP_001397500.1|NC_009707.1|257078|257080|R	\TAA\
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YP_001397502.1|NC_009707.1|261945|261947|D	\TAA\
YP_001397503.1|NC_009707.1|263745|263747|D	\TAA\
YP_001397504.1|NC_009707.1|265270|265272|D	\TAG\
YP_001397505.1|NC_009707.1|265302|265304|R	\TAA\
YP_001397506.1|NC_009707.1|266349|266351|R	\TAA\
YP_001397507.1|NC_009707.1|267856|267858|D	\TAA\
YP_001397508.1|NC_009707.1|269599|269601|D	\TAA\
YP_001397509.1|NC_009707.1|269598|269600|R	\TAA\
YP_001397510.1|NC_009707.1|270291|270293|R	\TAA\
YP_001397511.1|NC_009707.1|270533|270535|R	\TAA\
YP_001397512.1|NC_009707.1|271318|271320|R	\TAA\
YP_001397513.1|NC_009707.1|271524|271526|R	\TGA\
YP_001397514.1|NC_009707.1|271996|271998|R	\TAA\
YP_001397515.1|NC_009707.1|272570|272572|R	\TAA\
YP_001397516.1|NC_009707.1|272796|272798|R	\TAA\
YP_001397517.1|NC_009707.1|273030|273032|R	\TAA\
YP_001397518.1|NC_009707.1|273549|273551|R	\TGA\
YP_001397519.1|NC_009707.1|273790|273792|R	\TAA\
YP_001397520.1|NC_009707.1|274479|274481|R	\TAA\
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YP_001397522.1|NC_009707.1|276060|276062|R	\TAA\
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YP_001397526.1|NC_009707.1|278101|278103|R	\TAA\
YP_001397527.1|NC_009707.1|278992|278994|R	\TAA\
YP_001397528.1|NC_009707.1|279243|279245|R	\TAA\
YP_001397529.1|NC_009707.1|279760|279762|R	\TGA\
YP_001397530.1|NC_009707.1|280342|280344|R	\TAA\
YP_001397531.1|NC_009707.1|280888|280890|D	\TAA\
YP_001397532.1|NC_009707.1|281220|281222|R	\TGA\
YP_001397533.1|NC_009707.1|282280|282282|D	\TGA\
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YP_001398267.1|NC_009707.1|1049029|1049031|R	\TGA\
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YP_001398276.1|NC_009707.1|1057142|1057144|R	\TAA\
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YP_001398279.1|NC_009707.1|1063677|1063679|D	\TAA\
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YP_001398281.1|NC_009707.1|1065254|1065256|D	\TAA\
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YP_001398283.1|NC_009707.1|1066250|1066252|D	\TAA\
YP_001398284.1|NC_009707.1|1067678|1067680|D	\TGA\
YP_001398285.1|NC_009707.1|1068586|1068588|R	\TGA\
YP_001398286.1|NC_009707.1|1069609|1069611|R	\TGA\
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YP_001398288.1|NC_009707.1|1071794|1071796|R	\TAA\
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YP_001398290.1|NC_009707.1|1073702|1073704|R	\TAA\
YP_001398291.1|NC_009707.1|1074190|1074192|R	\TGA\
YP_001398292.1|NC_009707.1|1074517|1074519|R	\TAG\
YP_001398293.1|NC_009707.1|1074704|1074706|R	\TAA\
YP_001398294.1|NC_009707.1|1077714|1077716|R	\TAA\
YP_001398295.1|NC_009707.1|1079070|1079072|R	\TGA\
YP_001398296.1|NC_009707.1|1082182|1082184|D	\TAA\
YP_001398297.1|NC_009707.1|1084818|1084820|D	\TAA\
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YP_001398299.1|NC_009707.1|1086741|1086743|D	\TAA\
YP_001398300.1|NC_009707.1|1087707|1087709|D	\TAA\
YP_001398301.1|NC_009707.1|1088526|1088528|D	\TAG\
YP_001398302.1|NC_009707.1|1089312|1089314|D	\TAA\
YP_001398303.1|NC_009707.1|1090058|1090060|D	\TGA\
YP_001398304.1|NC_009707.1|1090618|1090620|D	\TAG\
YP_001398305.1|NC_009707.1|1091134|1091136|D	\TAG\
YP_001398306.1|NC_009707.1|1091703|1091705|D	\TGA\
YP_001398307.1|NC_009707.1|1092926|1092928|D	\TGA\
YP_001398308.1|NC_009707.1|1094758|1094760|D	\TAG\
YP_001398309.1|NC_009707.1|1095397|1095399|D	\TAA\
YP_001398310.1|NC_009707.1|1096727|1096729|D	\TAG\
YP_001398311.1|NC_009707.1|1097521|1097523|D	\TAA\
YP_001398312.1|NC_009707.1|1097547|1097549|R	\TAG\
YP_001398313.1|NC_009707.1|1098325|1098327|R	\TAG\
YP_001398314.1|NC_009707.1|1101178|1101180|R	\TAA\
YP_001398315.1|NC_009707.1|1103071|1103073|R	\TAA\
YP_001398316.1|NC_009707.1|1103598|1103600|R	\TGA\
YP_001398317.1|NC_009707.1|1104614|1104616|R	\TAA\
YP_001398318.1|NC_009707.1|1107745|1107747|D	\TAA\
YP_001398319.1|NC_009707.1|1111481|1111483|R	\TAA\
YP_001398320.1|NC_009707.1|1111704|1111706|R	\TGA\
YP_001398321.1|NC_009707.1|1112912|1112914|R	\TGA\
YP_001398322.1|NC_009707.1|1114565|1114567|R	\TAG\
YP_001398323.1|NC_009707.1|1115544|1115546|R	\TAA\
YP_001398324.1|NC_009707.1|1116388|1116390|R	\TAA\
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; Host name	nic44
; Job started	2012-05-05.011549
; Job done	2012-05-05.011550
; Seconds	0.37
;	user	0.37
;	system	0.08
;	cuser	0
;	csystem	0