-- dump date 20120504_141614 -- class Genbank::CDS -- table cds_note -- id note YP_005666631.1 PRIAM ID: PRI000415; [H] COG0113 Delta-aminolevulinic acid dehydratase YP_005666632.1 [C] COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA YP_005666634.1 [S] COG1747 Uncharacterized N-terminal domain of the transcription elongation factor GreA YP_005666635.1 PRIAM ID: PRI001239; [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_005666636.1 [M] COG1792 Cell shape-determining protein YP_005666637.1 [L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005666638.1 [L] COG1330 Exonuclease V gamma subunit YP_005666639.1 [GEPR] COG0477 Permeases of the major facilitator superfamily YP_005666640.1 [R] COG1054 Predicted sulfurtransferase YP_005666641.1 [J] COG0522 Ribosomal protein S4 and related proteins YP_005666642.1 PRIAM ID: PRI001476; [L] COG0648 Endonuclease IV YP_005666643.1 [R] COG0728 Uncharacterized membrane protein, putative virulence factor YP_005666649.1 PRIAM ID: PRI001823; [R] COG1137 ABC-type (unclassified) transport system, ATPase component YP_005666651.1 [M] COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005666652.1 [R] COG1837 Predicted RNA-binding protein (contains KH domain) YP_005666653.1 [J] COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005666656.1 PRIAM ID: PRI001029; [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005666657.1 PRIAM ID: PRI001027; [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005666658.1 PRIAM ID: PRI004475; [H] COG0373 Glutamyl-tRNA reductase YP_005666661.1 [T] COG1716 FOG: FHA domain YP_005666666.1 [NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005666669.1 [NU] COG1886 Flagellar motor switch/type III secretory pathway protein YP_005666670.1 [RTKL] COG0515 Serine/threonine protein kinase YP_005666671.1 [NU] COG1450 Type II secretory pathway, component PulD YP_005666672.1 PRIAM ID: PRI000136; [E] COG3869 Arginine kinase YP_005666673.1 [S] COG3880 Uncharacterized protein with conserved CXXC pairs YP_005666674.1 [J] COG0233 Ribosome recycling factor YP_005666675.1 [F] COG0528 Uridylate kinase YP_005666676.1 [J] COG0264 Translation elongation factor Ts YP_005666677.1 [J] COG0052 Ribosomal protein S2 YP_005666680.1 PRIAM ID: PRI001033; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005666681.1 [R] COG0457 FOG: TPR repeat YP_005666682.1 [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005666683.1 PRIAM ID: PRI001820; [O] COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_005666684.1 [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_005666685.1 PRIAM ID: PRI001260; [E] COG0520 Selenocysteine lyase YP_005666686.1 [G] COG0726 Predicted xylanase/chitin deacetylase YP_005666688.1 [K] COG1475 Predicted transcriptional regulators YP_005666689.1 PRIAM ID: PRI001824; [E] COG4608 ABC-type oligopeptide transport system, ATPase component YP_005666690.1 PRIAM ID: PRI001824; [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005666691.1 [P] COG1392 Phosphate transport regulator (distant homolog of PhoU) YP_005666692.1 [P] COG0306 Phosphate/sulphate permeases YP_005666693.1 PRIAM ID: PRI000833; [G] COG0126 3-phosphoglycerate kinase YP_005666697.1 PRIAM ID: PRI002190; [M] COG1686 D-alanyl-D-alanine carboxypeptidase YP_005666699.1 [T] COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_005666703.1 PRIAM ID: PRI000723; [L] COG0587 DNA polymerase III, alpha subunit YP_005666704.1 [G] COG2271 Sugar phosphate permease YP_005666706.1 [J] COG0124 Histidyl-tRNA synthetase YP_005666707.1 [J] COG0173 Aspartyl-tRNA synthetase YP_005666708.1 PRIAM ID: PRI002210; [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005666709.1 [J] COG0219 Predicted rRNA methylase (SpoU class) YP_005666710.1 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins YP_005666713.1 [R] COG0802 Predicted ATPase or kinase YP_005666714.1 PRIAM ID: PRI000724; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005666715.1 [I] COG1607 Acyl-CoA hydrolase YP_005666716.1 [M] COG0815 Apolipoprotein N-acyltransferase YP_005666717.1 [M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005666718.1 [I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005666719.1 [M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005666720.1 [J] COG0223 Methionyl-tRNA formyltransferase YP_005666722.1 [J] COG0087 Ribosomal protein L3 YP_005666723.1 [J] COG0088 Ribosomal protein L4 YP_005666724.1 [J] COG0089 Ribosomal protein L23 YP_005666725.1 [J] COG0090 Ribosomal protein L2 YP_005666726.1 [J] COG0185 Ribosomal protein S19 YP_005666727.1 [J] COG0091 Ribosomal protein L22 YP_005666728.1 [J] COG0092 Ribosomal protein S3 YP_005666729.1 [J] COG0197 Ribosomal protein L16/L10E YP_005666730.1 [J] COG0255 Ribosomal protein L29 YP_005666731.1 [J] COG0186 Ribosomal protein S17 YP_005666732.1 [J] COG0093 Ribosomal protein L14 YP_005666733.1 [J] COG0198 Ribosomal protein L24 YP_005666734.1 [J] COG0094 Ribosomal protein L5 YP_005666735.1 [J] COG0096 Ribosomal protein S8 YP_005666736.1 [J] COG0097 Ribosomal protein L6P/L9E YP_005666737.1 [J] COG0256 Ribosomal protein L18 YP_005666738.1 [J] COG0098 Ribosomal protein S5 YP_005666739.1 [J] COG0200 Ribosomal protein L15 YP_005666740.1 [U] COG0201 Preprotein translocase subunit SecY YP_005666741.1 [J] COG0099 Ribosomal protein S13 YP_005666742.1 [J] COG0100 Ribosomal protein S11 YP_005666743.1 [K] COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005666744.1 [J] COG0203 Ribosomal protein L17 YP_005666745.1 [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005666748.1 [L] COG0817 Holliday junction resolvasome, endonuclease subunit YP_005666749.1 [L] COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005666750.1 PRIAM ID: PRI001145; [F] COG0105 Nucleoside diphosphate kinase YP_005666751.1 PRIAM ID: PRI001002; [H] COG0095 Lipoate-protein ligase A YP_005666752.1 [D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005666753.1 [L] COG0305 Replicative DNA helicase YP_005666754.1 PRIAM ID: PRI001348; [I] COG0558 Phosphatidylglycerophosphate synthase YP_005666755.1 [C] COG3202 ATP/ADP translocase YP_005666756.1 [OU] COG0616 Periplasmic serine proteases (ClpP class) YP_005666757.1 PRIAM ID: PRI000971; [L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_005666758.1 [H] COG0237 Dephospho-CoA kinase YP_005666759.1 [K] COG1158 Transcription termination factor YP_005666761.1 PRIAM ID: PRI000916; [F] COG0461 Orotate phosphoribosyltransferase YP_005666762.1 [G] COG0448 ADP-glucose pyrophosphorylase YP_005666763.1 [R] COG1768 Predicted phosphohydrolase YP_005666764.1 [L] COG0742 N6-adenine-specific methylase YP_005666765.1 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005666766.1 [H] COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005666767.1 [R] COG0457 FOG: TPR repeat YP_005666773.1 [E] COG0747 ABC-type dipeptide transport system, periplasmic component YP_005666774.1 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005666775.1 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005666776.1 PRIAM ID: PRI001055; [L] COG0350 Methylated DNA-protein cysteine methyltransferase YP_005666777.1 [S] COG2849 Uncharacterized protein conserved in bacteria YP_005666778.1 [J] COG0072 Phenylalanyl-tRNA synthetase beta subunit YP_005666780.1 [S] COG1723 Uncharacterized conserved protein YP_005666782.1 [L] COG1381 Recombinational DNA repair protein (RecF pathway) YP_005666784.1 [J] COG1544 Ribosome-associated protein Y (PSrp-1) YP_005666785.1 [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005666787.1 PRIAM ID: PRI001633; [T] COG0642 Signal transduction histidine kinase YP_005666790.1 Predicted phosphatase/phosphohexomutase YP_005666791.1 [J] COG0101 Pseudouridylate synthase YP_005666792.1 [I] COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005666793.1 [R] COG1408 Predicted phosphohydrolases YP_005666794.1 [B] COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling YP_005666795.1 [J] COG1186 Protein chain release factor B YP_005666796.1 PRIAM ID: PRI000851; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005666798.1 [S] COG0217 Uncharacterized conserved protein YP_005666800.1 [M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005666801.1 [J] COG0018 Arginyl-tRNA synthetase YP_005666802.1 PRIAM ID: PRI000175; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005666803.1 [F] COG0283 Cytidylate kinase YP_005666804.1 PRIAM ID: PRI001480; [I] COG0575 CDP-diglyceride synthetase YP_005666805.1 [I] COG0020 Undecaprenyl pyrophosphate synthase YP_005666808.1 [U] COG0342 Preprotein translocase subunit SecD YP_005666809.1 [L] COG0608 Single-stranded DNA-specific exonuclease YP_005666812.1 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005666816.1 PRIAM ID: PRI000477; [M] COG0793 Periplasmic protease YP_005666819.1 [J] COG0048 Ribosomal protein S12 YP_005666820.1 [J] COG0049 Ribosomal protein S7 YP_005666821.1 [J] COG0480 Translation elongation factors (GTPases) YP_005666822.1 [J] COG0051 Ribosomal protein S10 YP_005666823.1 PRIAM ID: PRI003776; [P] COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_005666824.1 [I] COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005666826.1 [J] COG0261 Ribosomal protein L21 YP_005666827.1 [J] COG0211 Ribosomal protein L27 YP_005666828.1 [R] COG0536 Predicted GTPase YP_005666830.1 PRIAM ID: PRI001821; [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005666831.1 [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005666832.1 [H] COG0352 Thiamine monophosphate synthase YP_005666833.1 PRIAM ID: PRI001582; [H] COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005666838.1 [E] COG1115 Na+/alanine symporter YP_005666839.1 [MU] COG0597 Lipoprotein signal peptidase YP_005666840.1 [T] COG1734 DnaK suppressor protein YP_005666841.1 [K] COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_005666842.1 [H] COG0307 Riboflavin synthase alpha chain YP_005666843.1 PRIAM ID: PRI001540; [R] COG1092 Predicted SAM-dependent methyltransferases YP_005666844.1 [J] COG0566 rRNA methylases YP_005666845.1 [M] COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005666846.1 [C] COG1301 Na+/H+-dicarboxylate symporters YP_005666847.1 PRIAM ID: PRI000828; [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005666848.1 [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005666849.1 [R] COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_005666851.1 [H] COG1587 Uroporphyrinogen-III synthase YP_005666852.1 [E] COG0112 Glycine/serine hydroxymethyltransferase YP_005666853.1 PRIAM ID: PRI000206; [OU] COG0740 Protease subunit of ATP-dependent Clp proteases YP_005666854.1 [E] COG0253 Diaminopimelate epimerase YP_005666856.1 [H] COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005666857.1 [R] COG1427 Predicted periplasmic solute-binding protein YP_005666858.1 [HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005666861.1 [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005666862.1 [R] COG1253 Hemolysins and related proteins containing CBS domains YP_005666863.1 [R] COG0319 Predicted metal-dependent hydrolase YP_005666866.1 [S] COG2928 Uncharacterized conserved protein YP_005666867.1 PRIAM ID: PRI000774; [L] COG2094 3-methyladenine DNA glycosylase YP_005666868.1 [K] COG0557 Exoribonuclease R YP_005666869.1 PRIAM ID: PRI001331; [O] COG0443 Molecular chaperone YP_005666870.1 [O] COG0576 Molecular chaperone GrpE (heat shock protein) YP_005666871.1 [K] COG1420 Transcriptional regulator of heat shock gene YP_005666872.1 [J] COG0442 Prolyl-tRNA synthetase YP_005666875.1 [S] COG1872 Uncharacterized conserved protein YP_005666876.1 [R] COG2984 ABC-type uncharacterized transport system, periplasmic component YP_005666877.1 [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005666881.1 [S] COG4286 Uncharacterized conserved protein related to MYG1 family YP_005666882.1 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005666883.1 [C] COG1413 FOG: HEAT repeat YP_005666885.1 [ER] COG0591 Na+/proline symporter YP_005666887.1 [E] COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005666889.1 PRIAM ID: PRI003114; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005666891.1 PRIAM ID: PRI002023; [R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005666892.1 [R] COG2262 GTPases YP_005666893.1 [J] COG0621 2-methylthioadenine synthetase YP_005666895.1 [G] COG0296 1,4-alpha-glucan branching enzyme YP_005666904.1 frameshift after codon 203; possible phase variation (or sequencing error) at a poly-C stretch YP_005666910.1 frameshift after codon 417; possible phase variation (or sequencing error) at a poly-C stretch YP_005666914.1 [S] COG2155 Uncharacterized conserved protein YP_005666915.1 [J] COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005666916.1 PRIAM ID: PRI000288; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005666917.1 [J] COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005666921.1 [L] COG1039 Ribonuclease HIII YP_005666922.1 [S] COG1426 Uncharacterized protein conserved in bacteria YP_005666928.1 [O] COG1331 Highly conserved protein containing a thioredoxin domain YP_005666930.1 [J] COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005666931.1 [HI] COG1154 Deoxyxylulose-5-phosphate synthase YP_005666933.1 PRIAM ID: PRI002290 YP_005666934.1 [L] COG1570 Exonuclease VII, large subunit YP_005666935.1 [G] COG0149 Triosephosphate isomerase YP_005666936.1 [U] COG1314 Preprotein translocase subunit SecG YP_005666937.1 [J] COG0242 N-formylmethionyl-tRNA deformylase YP_005666939.1 [C] COG1413 FOG: HEAT repeat YP_005666940.1 [D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005666941.1 PRIAM ID: PRI001817; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005666942.1 [L] COG0582 Integrase YP_005666943.1 [R] COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_005666945.1 [O] COG0466 ATP-dependent Lon protease, bacterial type YP_005666947.1 PRIAM ID: PRI001024; [O] COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005666948.1 [J] COG0828 Ribosomal protein S21 YP_005666949.1 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005666950.1 PRIAM ID: PRI001217; [C] COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005666952.1 [R] COG0658 Predicted membrane metal-binding protein YP_005666954.1 [G] COG1925 Phosphotransferase system, HPr-related proteins YP_005666955.1 [G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_005666956.1 [S] COG0718 Uncharacterized protein conserved in bacteria YP_005666957.1 [L] COG2812 DNA polymerase III, gamma/tau subunits YP_005666958.1 [R] COG1480 Predicted membrane-associated HD superfamily hydrolase YP_005666962.1 PRIAM ID: PRI000889; [H] COG0181 Porphobilinogen deaminase YP_005666963.1 [O] COG1066 Predicted ATP-dependent serine protease YP_005666964.1 [K] COG0571 dsRNA-specific ribonuclease YP_005666966.1 PRIAM ID: PRI001632; [G] COG1109 Phosphomannomutase YP_005666967.1 PRIAM ID: PRI001879; [P] COG0605 Superoxide dismutase YP_005666968.1 [I] COG0777 Acetyl-CoA carboxylase beta subunit YP_005666969.1 PRIAM ID: PRI000758; [F] COG0756 dUTPase YP_005666970.1 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005666971.1 [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_005666975.1 [S] COG3027 Uncharacterized protein conserved in bacteria YP_005666976.1 [J] COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005666977.1 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005666978.1 [H] COG0095 Lipoate-protein ligase A YP_005666979.1 [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005666981.1 [E] COG0509 Glycine cleavage system H protein (lipoate-binding) YP_005666984.1 [C] COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE YP_005666985.1 [C] COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD YP_005666986.1 [C] COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC YP_005666987.1 [C] COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB YP_005666989.1 [M] COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005666990.1 [L] COG0593 ATPase involved in DNA replication initiation YP_005666991.1 [R] COG0457 FOG: TPR repeat YP_005666993.1 [M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005666995.1 PRIAM ID: PRI001033; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005666997.1 [M] COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005666998.1 PRIAM ID: PRI001032; [M] COG0860 N-acetylmuramoyl-L-alanine amidase YP_005666999.1 [L] COG0776 Bacterial nucleoid DNA-binding protein YP_005667001.1 [I] COG0825 Acetyl-CoA carboxylase alpha subunit YP_005667002.1 PRIAM ID: PRI002426; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005667004.1 [R] COG2107 Predicted periplasmic solute-binding protein YP_005667005.1 PRIAM ID: PRI000724; [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005667006.1 [S] COG5465 Uncharacterized conserved protein YP_005667007.1 [N] COG3190 Flagellar biogenesis protein YP_005667008.1 [R] COG0561 Predicted hydrolases of the HAD superfamily YP_005667009.1 PRIAM ID: PRI000095; [I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005667012.1 [J] COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005667013.1 [L] COG1194 A/G-specific DNA glycosylase YP_005667014.1 [R] COG1694 Predicted pyrophosphatase YP_005667015.1 [R] COG1266 Predicted metal-dependent membrane protease YP_005667021.1 [T] COG0631 Serine/threonine protein phosphatase YP_005667022.1 PRIAM ID: PRI001260; [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005667023.1 [R] COG1253 Hemolysins and related proteins containing CBS domains YP_005667024.1 [R] COG1253 Hemolysins and related proteins containing CBS domains YP_005667026.1 [F] COG0717 Deoxycytidine deaminase YP_005667027.1 [L] COG2255 Holliday junction resolvasome, helicase subunit YP_005667029.1 PRIAM ID: PRI003748; [G] COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_005667031.1 [L] COG0629 Single-stranded DNA-binding protein YP_005667032.1 PRIAM ID: PRI001506; [E] COG0260 Leucyl aminopeptidase YP_005667034.1 [L] COG1466 DNA polymerase III, delta subunit YP_005667035.1 [R] COG0313 Predicted methyltransferases YP_005667039.1 PRIAM ID: PRI000715; [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005667041.1 [C] COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005667042.1 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005667043.1 [S] COG1496 Uncharacterized conserved protein YP_005667044.1 [I] COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005667048.1 PRIAM ID: PRI002042; [C] COG0633 Ferredoxin YP_005667049.1 [NU] COG1298 Flagellar biosynthesis pathway, component FlhA YP_005667050.1 [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005667052.1 [J] COG0162 Tyrosyl-tRNA synthetase YP_005667053.1 [G] COG0362 6-phosphogluconate dehydrogenase YP_005667054.1 PRIAM ID: PRI000879; [M] COG0481 Membrane GTPase LepA YP_005667056.1 [C] COG3202 ATP/ADP translocase YP_005667058.1 [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005667059.1 PRIAM ID: PRI001821; [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005667060.1 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005667061.1 [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005667062.1 [I] COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005667063.1 [M] COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005667065.1 [L] COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005667066.1 [L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005667067.1 [O] COG0691 tmRNA-binding protein YP_005667068.1 [H] COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_005667069.1 [H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005667074.1 PRIAM ID: PRI004694; [I] COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005667075.1 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005667076.1 [J] COG0227 Ribosomal protein L28 YP_005667077.1 [G] COG1640 4-alpha-glucanotransferase YP_005667080.1 [U] COG4789 Type III secretory pathway YP_005667081.1 [NU] COG1377 Flagellar biosynthesis pathway, component FlhB YP_005667082.1 [J] COG0012 Predicted GTPase, probable translation factor YP_005667083.1 [H] COG0196 FAD synthase YP_005667084.1 [J] COG0130 Pseudouridine synthase YP_005667085.1 [J] COG0858 Ribosome-binding factor A YP_005667086.1 [J] COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005667087.1 [K] COG0195 Transcription elongation factor YP_005667088.1 [J] COG0539 Ribosomal protein S1 YP_005667089.1 [O] COG0492 Thioredoxin reductase YP_005667090.1 [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005667092.1 [M] COG0682 Prolipoprotein diacylglyceryltransferase YP_005667093.1 [U] COG0706 Preprotein translocase subunit YidC YP_005667094.1 [L] COG0593 ATPase involved in DNA replication initiation YP_005667096.1 PRIAM ID: PRI001558; [G] COG0058 Glucan phosphorylase YP_005667097.1 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005667098.1 [C] COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005667099.1 [C] COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005667101.1 [M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005667102.1 [M] COG2825 Outer membrane protein YP_005667103.1 [M] COG4775 Outer membrane protein/protective antigen OMA87 YP_005667104.1 [L] COG0353 Recombinational DNA repair protein (RecF pathway) YP_005667105.1 PRIAM ID: PRI001373; [I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005667106.1 [I] COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005667107.1 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005667108.1 [IQ] COG0236 Acyl carrier protein YP_005667109.1 [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_005667113.1 [R] COG0733 Na+-dependent transporters of the SNF family YP_005667114.1 [C] COG1301 Na+/H+-dicarboxylate symporters YP_005667116.1 [R] COG0457 FOG: TPR repeat YP_005667117.1 PRIAM ID: PRI002147; [P] COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005667119.1 [E] COG0531 Amino acid transporters YP_005667120.1 PRIAM ID: PRI004191; [G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes YP_005667122.1 PRIAM ID: PRI001823; [P] COG1135 ABC-type metal ion transport system, ATPase component YP_005667123.1 [P] COG2011 ABC-type metal ion transport system, permease component YP_005667124.1 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005667127.1 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005667128.1 [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005667129.1 [F] COG0125 Thymidylate kinase YP_005667130.1 PRIAM ID: PRI001554; [L] COG0470 ATPase involved in DNA replication YP_005667131.1 [R] COG0400 Predicted esterase YP_005667132.1 [J] COG0009 Putative translation factor (SUA5) YP_005667133.1 PRIAM ID: PRI000862; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_005667136.1 [R] COG1611 Predicted Rossmann fold nucleotide-binding protein YP_005667137.1 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005667138.1 [H] COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005667139.1 [S] COG1284 Uncharacterized conserved protein YP_005667140.1 [R] COG0496 Predicted acid phosphatase YP_005667141.1 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005667142.1 [R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA YP_005667146.1 [J] COG0621 2-methylthioadenine synthetase YP_005667147.1 [J] COG0267 Ribosomal protein L33 YP_005667148.1 [V] COG0577 ABC-type antimicrobial peptide transport system, permease component YP_005667149.1 PRIAM ID: PRI001821; [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005667151.1 [J] COG0102 Ribosomal protein L13 YP_005667152.1 [J] COG0103 Ribosomal protein S9 YP_005667153.1 [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005667154.1 PRIAM ID: PRI000273; [F] COG0563 Adenylate kinase and related kinases YP_005667158.1 [G] COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005667159.1 [G] COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005667160.1 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005667161.1 PRIAM ID: PRI001024; [O] COG0533 Metal-dependent proteases with possible chaperone activity YP_005667162.1 [K] COG1438 Arginine repressor YP_005667163.1 [E] COG0765 ABC-type amino acid transport system, permease component YP_005667164.1 PRIAM ID: PRI001823; [E] COG1126 ABC-type polar amino acid transport system, ATPase component YP_005667167.1 [S] COG1295 Predicted membrane protein YP_005667168.1 [QR] COG0500 SAM-dependent methyltransferases YP_005667170.1 [G] COG0036 Pentose-5-phosphate-3-epimerase YP_005667171.1 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005667172.1 PRIAM ID: PRI003581; [I] COG0511 Biotin carboxyl carrier protein YP_005667173.1 [I] COG0439 Biotin carboxylase YP_005667182.1 frameshift after codon 118 YP_005667186.1 PRIAM ID: PRI000245; [F] COG1816 Adenosine deaminase YP_005667187.1 [F] COG0519 GMP synthase, PP-ATPase domain/subunit YP_005667188.1 PRIAM ID: PRI002146; [F] COG0516 IMP dehydrogenase/GMP reductase YP_005667194.1 [S] COG1738 Uncharacterized conserved protein YP_005667195.1 [J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005667199.1 [O] COG1495 Disulfide bond formation protein DsbB YP_005667200.1 [O] COG1651 Protein-disulfide isomerase YP_005667203.1 PRIAM ID: PRI003356; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_005667204.1 PRIAM ID: PRI002015; [F] COG0775 Nucleoside phosphorylase YP_005667206.1 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005667207.1 [F] COG0504 CTP synthase (UTP-ammonia lyase) YP_005667208.1 [L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005667209.1 [E] COG0747 ABC-type dipeptide transport system, periplasmic component YP_005667210.1 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005667211.1 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005667212.1 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005667213.1 [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005667214.1 PRIAM ID: PRI001824; [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005667215.1 PRIAM ID: PRI001824; [EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005667217.1 [P] COG0471 Di- and tricarboxylate transporters YP_005667218.1 [G] COG0205 6-phosphofructokinase YP_005667219.1 [R] COG1073 Hydrolases of the alpha/beta superfamily YP_005667220.1 [G] COG0205 6-phosphofructokinase YP_005667221.1 [M] COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005667222.1 [J] COG0495 Leucyl-tRNA synthetase YP_005667223.1 [R] COG1073 Hydrolases of the alpha/beta superfamily YP_005667224.1 PRIAM ID: PRI002705 YP_005667226.1 [L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005667227.1 [S] COG1262 Uncharacterized conserved protein YP_005667232.1 [S] COG2912 Uncharacterized conserved protein YP_005667233.1 frameshift after codon 383; possible phase variation (or sequencing error) at a homopolymeric stretch YP_005667235.1 frameshift after codon 413; possible phase variation (or sequencing error) at a homopolymeric stretch YP_005667236.1 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005667238.1 PRIAM ID: PRI003356; [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005667239.1 [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005667240.1 PRIAM ID: PRI003665; [H] COG0001 Glutamate-1-semialdehyde aminotransferase YP_005667241.1 [K] COG1678 Putative transcriptional regulator YP_005667242.1 [S] COG1259 Uncharacterized conserved protein YP_005667243.1 [G] COG0120 Ribose 5-phosphate isomerase YP_005667248.1 [S] COG0327 Uncharacterized conserved protein YP_005667249.1 [E] COG1164 Oligoendopeptidase F YP_005667250.1 [O] COG0234 Co-chaperonin GroES (HSP10) YP_005667251.1 [O] COG0459 Chaperonin GroEL (HSP60 family) YP_005667254.1 PRIAM ID: PRI001178; [S] COG4285 Uncharacterized conserved protein YP_005667255.1 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005667256.1 PRIAM ID: PRI001958; [L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005667257.1 [J] COG0143 Methionyl-tRNA synthetase YP_005667259.1 [F] COG0194 Guanylate kinase YP_005667260.1 [L] COG0164 Ribonuclease HII YP_005667261.1 [J] COG0335 Ribosomal protein L19 YP_005667262.1 [J] COG0336 tRNA-(guanine-N1)-methyltransferase YP_005667263.1 [J] COG0228 Ribosomal protein S16 YP_005667264.1 [U] COG0541 Signal recognition particle GTPase YP_005667265.1 [J] COG2890 Methylase of polypeptide chain release factors YP_005667266.1 [J] COG0216 Protein chain release factor A YP_005667267.1 [J] COG0254 Ribosomal protein L31 YP_005667269.1 [U] COG0681 Signal peptidase I YP_005667270.1 [J] COG0060 Isoleucyl-tRNA synthetase YP_005667272.1 [T] COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_005667276.1 [C] COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005667277.1 [C] COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005667278.1 [S] COG1624 Uncharacterized conserved protein YP_005667280.1 [M] COG1560 Lauroyl/myristoyl acyltransferase YP_005667282.1 [G] COG0469 Pyruvate kinase YP_005667283.1 PRIAM ID: PRI001817; [L] COG0178 Excinuclease ATPase subunit YP_005667284.1 [RTKL] COG0515 Serine/threonine protein kinase YP_005667285.1 [J] COG0525 Valyl-tRNA synthetase YP_005667287.1 [C] COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005667288.1 [C] COG1269 Archaeal/vacuolar-type H+-ATPase subunit I YP_005667289.1 [C] COG1394 Archaeal/vacuolar-type H+-ATPase subunit D YP_005667290.1 PRIAM ID: PRI000139; [C] COG1156 Archaeal/vacuolar-type H+-ATPase subunit B YP_005667291.1 PRIAM ID: PRI004206; [C] COG1155 Archaeal/vacuolar-type H+-ATPase subunit A YP_005667293.1 [C] COG1390 Archaeal/vacuolar-type H+-ATPase subunit E YP_005667296.1 [G] COG0176 Transaldolase YP_005667297.1 [K] COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005667298.1 [K] COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005667299.1 [J] COG0222 Ribosomal protein L7/L12 YP_005667300.1 [J] COG0244 Ribosomal protein L10 YP_005667301.1 [J] COG0081 Ribosomal protein L1 YP_005667302.1 [J] COG0080 Ribosomal protein L11 YP_005667303.1 [K] COG0250 Transcription antiterminator YP_005667304.1 [U] COG0690 Preprotein translocase subunit SecE YP_005667305.1 [J] COG0050 GTPases - translation elongation factors YP_005667306.1 [J] COG0361 Translation initiation factor 1 (IF-1) YP_005667308.1 [R] COG2166 SufE protein probably involved in Fe-S center assembly YP_005667309.1 [R] COG1268 Uncharacterized conserved protein YP_005667314.1 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005667315.1 PRIAM ID: PRI003950; [E] COG0527 Aspartokinases YP_005667316.1 [E] COG0136 Aspartate-semialdehyde dehydrogenase YP_005667317.1 PRIAM ID: PRI001090; [E] COG0289 Dihydrodipicolinate reductase YP_005667318.1 PRIAM ID: PRI000460; [E] COG3186 Phenylalanine-4-hydroxylase YP_005667319.1 [S] COG1738 Uncharacterized conserved protein YP_005667321.1 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005667322.1 [H] COG0502 Biotin synthase and related enzymes YP_005667323.1 PRIAM ID: PRI002623; [H] COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005667324.1 [H] COG0132 Dethiobiotin synthetase YP_005667325.1 [H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005667327.1 [E] COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005667328.1 [E] COG0703 Shikimate kinase YP_005667329.1 [E] COG0082 Chorismate synthase YP_005667330.1 [E] COG0337 3-dehydroquinate synthetase YP_005667331.1 [E] COG0169 Shikimate 5-dehydrogenase YP_005667334.1 [S] COG1945 Uncharacterized conserved protein YP_005667335.1 [E] COG0531 Amino acid transporters YP_005667336.1 PRIAM ID: PRI001754; [E] COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005667338.1 PRIAM ID: PRI004501; [C] COG0039 Malate/lactate dehydrogenases YP_005667340.1 PRIAM ID: PRI000487; [G] COG0166 Glucose-6-phosphate isomerase YP_005667341.1 [L] COG0582 Integrase YP_005667344.1 [R] COG0457 FOG: TPR repeat YP_005667347.1 [QR] COG0500 SAM-dependent methyltransferases YP_005667348.1 [IM] COG0761 Penicillin tolerance protein YP_005667350.1 [P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_005667351.1 [P] COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005667352.1 [C] COG0114 Fumarase YP_005667353.1 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_005667355.1 [U] COG2095 Multiple antibiotic transporter YP_005667356.1 [U] COG2095 Multiple antibiotic transporter YP_005667357.1 [J] COG0024 Methionine aminopeptidase YP_005667365.1 PRIAM ID: PRI001166; [FJ] COG0590 Cytosine/adenosine deaminases YP_005667366.1 [J] COG0184 Ribosomal protein S15P/S13E YP_005667367.1 [J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005667368.1 PRIAM ID: PRI001472; [O] COG0465 ATP-dependent Zn proteases YP_005667369.1 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005667370.1 [R] COG0795 Predicted permeases YP_005667371.1 [R] COG0795 Predicted permeases YP_005667373.1 [J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005667374.1 [J] COG0292 Ribosomal protein L20 YP_005667375.1 [J] COG0291 Ribosomal protein L35 YP_005667376.1 [J] COG0290 Translation initiation factor 3 (IF-3) YP_005667377.1 [K] COG0781 Transcription termination factor YP_005667378.1 [M] COG0812 UDP-N-acetylmuramate dehydrogenase YP_005667379.1 [QR] COG0500 SAM-dependent methyltransferases YP_005667380.1 [R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005667381.1 [F] COG0208 Ribonucleotide reductase, beta subunit YP_005667382.1 [F] COG0209 Ribonucleotide reductase, alpha subunit YP_005667383.1 PRIAM ID: PRI001347; [I] COG1183 Phosphatidylserine synthase YP_005667384.1 [S] COG1322 Uncharacterized protein conserved in bacteria YP_005667385.1 [R] COG1026 Predicted Zn-dependent peptidases, insulinase-like YP_005667386.1 PRIAM ID: PRI000640; [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005667387.1 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005667388.1 [C] COG0074 Succinyl-CoA synthetase, alpha subunit YP_005667389.1 [C] COG0045 Succinyl-CoA synthetase, beta subunit YP_005667390.1 [U] COG0552 Signal recognition particle GTPase YP_005667391.1 [R] COG0670 Integral membrane protein, interacts with FtsH YP_005667392.1 [E] COG0814 Amino acid permeases YP_005667393.1 [M] COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005667394.1 [G] COG1109 Phosphomannomutase YP_005667395.1 PRIAM ID: PRI000787; [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005667396.1 [M] COG0763 Lipid A disaccharide synthetase YP_005667409.1 [I] COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005667410.1 [J] COG0333 Ribosomal protein L32 YP_005667412.1 [J] COG1530 Ribonucleases G and E YP_005667413.1 PRIAM ID: PRI001022 YP_005667414.1 PRIAM ID: PRI000705; [O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_005667417.1 [I] COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005667418.1 [J] COG0359 Ribosomal protein L9 YP_005667419.1 [J] COG0238 Ribosomal protein S18 YP_005667420.1 [J] COG0360 Ribosomal protein S6 YP_005667421.1 PRIAM ID: PRI001009; [J] COG0193 Peptidyl-tRNA hydrolase YP_005667422.1 [J] COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005667423.1 PRIAM ID: PRI001170; [G] COG0297 Glycogen synthase YP_005667424.1 PRIAM ID: PRI001348; [I] COG0558 Phosphatidylglycerophosphate synthase YP_005667425.1 [J] COG0751 Glycyl-tRNA synthetase, beta subunit YP_005667430.1 [L] COG0358 DNA primase (bacterial type) YP_005667431.1 [L] COG0249 Mismatch repair ATPase (MutS family) YP_005667432.1 [L] COG0322 Nuclease subunit of the excinuclease complex YP_005667434.1 [J] COG0199 Ribosomal protein S14 YP_005667435.1 [J] COG0257 Ribosomal protein L36 YP_005667437.1 [OC] COG0526 Thiol-disulfide isomerase and thioredoxins YP_005667438.1 [J] COG0215 Cysteinyl-tRNA synthetase YP_005667439.1 [J] COG1190 Lysyl-tRNA synthetase (class II) YP_005667440.1 PRIAM ID: PRI001830; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins YP_005667442.1 [L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005667444.1 PRIAM ID: PRI000173; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_005667445.1 [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005667446.1 PRIAM ID: PRI001455; [P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005667447.1 PRIAM ID: PRI001778; [E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005667448.1 PRIAM ID: PRI001150; [C] COG0221 Inorganic pyrophosphatase YP_005667449.1 PRIAM ID: PRI001957; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005667450.1 [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005667451.1 [S] COG0799 Uncharacterized homolog of plant Iojap protein YP_005667452.1 [E] COG0560 Phosphoserine phosphatase YP_005667454.1 [HR] COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005667455.1 [J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005667456.1 [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_005667458.1 [P] COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_005667459.1 [R] COG1837 Predicted RNA-binding protein (contains KH domain) YP_005667460.1 [M] COG0773 UDP-N-acetylmuramate-alanine ligase YP_005667461.1 PRIAM ID: PRI000420; [M] COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005667462.1 [D] COG0772 Bacterial cell division membrane protein YP_005667463.1 PRIAM ID: PRI002193; [M] COG1388 FOG: LysM repeat YP_005667464.1 [M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005667465.1 [M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005667466.1 [M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005667467.1 [O] COG0459 Chaperonin GroEL (HSP60 family) YP_005667468.1 [R] COG1409 Predicted phosphohydrolases YP_005667470.1 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005667471.1 PRIAM ID: PRI001703; [F] COG0775 Nucleoside phosphorylase YP_005667472.1 [G] COG0021 Transketolase YP_005667473.1 [J] COG0013 Alanyl-tRNA synthetase YP_005667474.1 [LK] COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005667475.1 [H] COG0407 Uroporphyrinogen-III decarboxylase YP_005667476.1 [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005667477.1 [H] COG1232 Protoporphyrinogen oxidase YP_005667480.1 [J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_005667481.1 [U] COG1862 Preprotein translocase subunit YajC YP_005667482.1 [C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF YP_005667484.1 [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005667485.1 PRIAM ID: PRI002023; [R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005667486.1 [R] COG2940 Proteins containing SET domain YP_005667487.1 [R] COG1881 Phospholipid-binding protein YP_005667488.1 [E] COG1115 Na+/alanine symporter YP_005667491.1 [H] COG0054 Riboflavin synthase beta-chain YP_005667492.1 PRIAM ID: PRI002117; [H] COG0807 GTP cyclohydrolase II YP_005667493.1 [H] COG1985 Pyrimidine reductase, riboflavin biosynthesis YP_005667494.1 [J] COG0172 Seryl-tRNA synthetase YP_005667495.1 [S] COG1814 Uncharacterized membrane protein YP_005667496.1 [P] COG2217 Cation transport ATPase YP_005667497.1 [D] COG0772 Bacterial cell division membrane protein YP_005667498.1 PRIAM ID: PRI001182; [H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005667500.1 [J] COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005667501.1 PRIAM ID: PRI000555; [G] COG0588 Phosphoglycerate mutase 1 YP_005667502.1 PRIAM ID: PRI001260; [E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005667503.1 [C] COG0822 NifU homolog involved in Fe-S cluster formation YP_005667504.1 [N] COG1536 Flagellar motor switch protein YP_005667506.1 [NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005667508.1 [G] COG4284 UDP-glucose pyrophosphorylase YP_005667509.1 PRIAM ID: PRI002311; [C] COG0240 Glycerol-3-phosphate dehydrogenase YP_005667513.1 PRIAM ID: PRI000714; [C] COG1274 Phosphoenolpyruvate carboxykinase (GTP) YP_005667514.1 [D] COG1077 Actin-like ATPase involved in cell morphogenesis YP_005667515.1 [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005667516.1 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005667517.1 PRIAM ID: PRI000206; [OU] COG0740 Protease subunit of ATP-dependent Clp proteases YP_005667518.1 PRIAM ID: PRI001061; [O] COG1219 ATP-dependent protease Clp, ATPase subunit YP_005667519.1 PRIAM ID: PRI000606; [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005667520.1 [R] COG1160 Predicted GTPases YP_005667522.1 [U] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005667523.1 [R] COG0457 FOG: TPR repeat YP_005667524.1 [I] COG0688 Phosphatidylserine decarboxylase YP_005667525.1 [R] COG0486 Predicted GTPase YP_005667526.1 PRIAM ID: PRI001213; [L] COG0177 Predicted EndoIII-related endonuclease YP_005667527.1 [E] COG1114 Branched-chain amino acid permeases YP_005667528.1 [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005667530.1 [C] COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005667531.1 [H] COG0320 Lipoate synthase YP_005667532.1 [U] COG4669 Type III secretory pathway, lipoprotein EscJ YP_005667534.1 [NU] COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005667535.1 [NU] COG1338 Flagellar biosynthesis pathway, component FliP YP_005667536.1 [U] COG4794 Type III secretory pathway, component EscS YP_005667537.1 [U] COG4791 Type III secretory pathway, component EscT YP_005667542.1 [NU] COG2165 Type II secretory pathway, pseudopilin PulG YP_005667543.1 [NU] COG1459 Type II secretory pathway, component PulF YP_005667544.1 [NU] COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_005667545.1 [NU] COG1450 Type II secretory pathway, component PulD YP_005667547.1 PRIAM ID: PRI004710; [E] COG0006 Xaa-Pro aminopeptidase YP_005667548.1 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005667549.1 [R] COG0457 FOG: TPR repeat YP_005667553.1 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005667554.1 [J] COG0441 Threonyl-tRNA synthetase YP_005667555.1 PRIAM ID: PRI001996; [D] COG1192 ATPases involved in chromosome partitioning YP_005667558.1 [J] COG0180 Tryptophanyl-tRNA synthetase YP_005667559.1 [L] COG0556 Helicase subunit of the DNA excision repair complex YP_005667560.1 [G] COG0148 Enolase YP_005667561.1 PRIAM ID: PRI000365; [TK] COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005667562.1 [TK] COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_005667565.1 [C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005667566.1 [C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005667567.1 [C] COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005667568.1 [L] COG0084 Mg-dependent DNase YP_005667569.1 PRIAM ID: PRI001830; [OC] COG4232 Thiol:disulfide interchange protein YP_005667570.1 [U] COG0811 Biopolymer transport proteins YP_005667571.1 [U] COG0848 Biopolymer transport protein YP_005667573.1 [U] COG0823 Periplasmic component of the Tol biopolymer transport system YP_005667574.1 [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005667575.1 PRIAM ID: PRI003497; [M] COG1388 FOG: LysM repeat YP_005667577.1 [O] COG0450 Peroxiredoxin YP_005667578.1 [O] COG0459 Chaperonin GroEL (HSP60 family) YP_005667579.1 [S] COG3876 Uncharacterized protein conserved in bacteria YP_005667580.1 PRIAM ID: PRI001592; [F] COG0127 Xanthosine triphosphate pyrophosphatase YP_005667582.1 [L] COG0692 Uracil DNA glycosylase YP_005667583.1 [L] COG0210 Superfamily I DNA and RNA helicases YP_005667584.1 [K] COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005667586.1 [L] COG0550 Topoisomerase IA YP_005667587.1 [J] COG0042 tRNA-dihydrouridine synthase YP_005667590.1 [S] COG2849 Uncharacterized protein conserved in bacteria YP_005667591.1 [H] COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005667592.1 [L] COG0468 RecA/RadA recombinase YP_005667593.1 [H] COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_005667594.1 [S] COG1478 Uncharacterized conserved protein YP_005667595.1 PRIAM ID: PRI000610; [H] COG0262 Dihydrofolate reductase YP_005667596.1 [H] COG0294 Dihydropteroate synthase and related enzymes YP_005667597.1 [H] COG1539 Dihydroneopterin aldolase YP_005667598.1 [K] COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005667600.1 [J] COG0268 Ribosomal protein S20 YP_005667602.1 [L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005667604.1 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005667605.1 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005667606.1 PRIAM ID: PRI001340; [H] COG0142 Geranylgeranyl pyrophosphate synthase YP_005667608.1 [F] COG1351 Predicted alternative thymidylate synthase