-- dump date   	20120504_142021
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_005146101.1	PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_005146102.1	PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_005146103.1	TIGRFAM: S4 domain protein YaaA
YP_005146104.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_005146106.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_005146107.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005146108.1	PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_005146111.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_005146112.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005146114.1	PFAM: Protein of unknown function (DUF2508)
YP_005146115.1	PFAM: SigmaK-factor processing regulatory protein BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA
YP_005146116.1	PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
YP_005146118.1	PFAM: Choline/ethanolamine kinase; TIGRFAM: spore coat protein, CotS family
YP_005146119.1	PFAM: Formate--tetrahydrofolate ligase; manually curated
YP_005146120.1	PFAM: YabG peptidase U57
YP_005146121.1	PFAM: Protein of unknown function (DUF1021)
YP_005146122.1	PFAM: LysM domain
YP_005146123.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_005146124.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005146125.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005146126.1	PFAM: PspA/IM30 family
YP_005146127.1	PFAM: Acetyltransferase (GNAT) family
YP_005146129.1	PFAM: Protein of unknown function (DUF342)
YP_005146131.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_005146132.1	PFAM: Calcineurin-like phosphoesterase
YP_005146134.1	PFAM: NlpC/P60 family; Bacterial SH3 domain
YP_005146135.1	PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase
YP_005146136.1	PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme
YP_005146137.1	TIGRFAM: germination protein YpeB
YP_005146138.1	PFAM: MarR family
YP_005146139.1	PFAM: Domain of unknown function (DUF373)
YP_005146140.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_005146141.1	PFAM: Methyltransferase domain
YP_005146143.1	PFAM: S-layer homology domain
YP_005146144.1	PFAM: CAAX amino terminal protease family
YP_005146145.1	PFAM: IstB-like ATP binding protein
YP_005146146.1	PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain
YP_005146147.1	PFAM: Ammonium Transporter Family; Nitrogen regulatory protein P-II; TIGRFAM: ammonium transporter
YP_005146148.1	PFAM: Ferritin-like domain
YP_005146149.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005146150.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005146151.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005146152.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146153.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146154.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005146155.1	PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family
YP_005146156.1	PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD
YP_005146157.1	TIGRFAM: exonuclease SbcC
YP_005146158.1	PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
YP_005146159.1	PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein
YP_005146161.1	PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain
YP_005146162.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2325)
YP_005146163.1	PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_005146164.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_005146165.1	PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_005146166.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005146167.1	PFAM: Dockerin type I repeat
YP_005146168.1	PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein
YP_005146170.1	PFAM: Prephenate dehydratase; ACT domain
YP_005146172.1	PFAM: DHH family; DHHA1 domain
YP_005146173.1	PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_005146174.1	PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_005146175.1	PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_005146176.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_005146177.1	PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_005146179.1	PFAM: Thioesterase superfamily
YP_005146180.1	PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase
YP_005146182.1	TIGRFAM: helicase, putative, RecD/TraA family
YP_005146183.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; manually curated; non-canonical start codon
YP_005146184.1	TIGRFAM: flagellar operon protein TIGR03826
YP_005146185.1	PFAM: Anti-sigma-28 factor, FlgM
YP_005146186.1	PFAM: FlgN protein
YP_005146187.1	PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK
YP_005146188.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK
YP_005146189.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3
YP_005146191.1	PFAM: FliW protein
YP_005146192.1	PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_005146193.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_005146195.1	PFAM: FlaG protein
YP_005146196.1	PFAM: Flagellar hook-associated protein 2 C-terminus
YP_005146197.1	PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS
YP_005146198.1	PFAM: FlgN protein
YP_005146199.1	PFAM: Kelch motif
YP_005146200.1	PFAM: Protein of unknown function (DUF1749)
YP_005146201.1	PFAM: Radical SAM superfamily
YP_005146202.1	PFAM: Protein kinase domain; CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005146203.1	PFAM: SAF domain
YP_005146205.1	PFAM: Type II/IV secretion system protein
YP_005146206.1	PFAM: Bacterial type II secretion system protein F domain
YP_005146213.1	PFAM: MarR family
YP_005146214.1	PFAM: Glutathione peroxidase
YP_005146215.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain
YP_005146216.1	PFAM: ABC transporter
YP_005146217.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005146218.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146219.1	PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein
YP_005146220.1	PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_005146221.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_005146222.1	PFAM: Isochorismatase family
YP_005146223.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005146225.1	PFAM: Peptidase family S51; TIGRFAM: cyanophycinase
YP_005146226.1	PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase
YP_005146228.1	PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_005146230.1	PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_005146231.1	PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase
YP_005146232.1	PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_005146233.1	PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain
YP_005146234.1	PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase
YP_005146235.1	PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus
YP_005146236.1	PFAM: Putative modulator of DNA gyrase
YP_005146237.1	PFAM: Putative modulator of DNA gyrase
YP_005146238.1	PFAM: HAMP domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146239.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146240.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146241.1	PFAM: Bacterial extracellular solute-binding protein
YP_005146242.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146243.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146244.1	PFAM: Bacterial extracellular solute-binding protein
YP_005146245.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146246.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146247.1	PFAM: Polysaccharide deacetylase
YP_005146248.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146249.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146250.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146251.1	PFAM: Bacterial extracellular solute-binding protein
YP_005146252.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146253.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146254.1	PFAM: Glycosyl hydrolase family 10
YP_005146255.1	PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain
YP_005146256.1	PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain
YP_005146257.1	PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_005146258.1	PFAM: Protein of unknown function (DUF970)
YP_005146259.1	PFAM: Protein of unknown function (DUF327)
YP_005146260.1	PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau
YP_005146261.1	PFAM: PSP1 C-terminal conserved region
YP_005146262.1	PFAM: 4Fe-4S binding domain
YP_005146263.1	PFAM: Methyltransferase small domain
YP_005146264.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family
YP_005146265.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_005146266.1	PFAM: Nucleoside recognition
YP_005146268.1	PFAM: Protein of unknown function (DUF2600)
YP_005146269.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_005146271.1	PFAM: 3D domain; Domain of unknown function (DUF348); G5 domain
YP_005146272.1	PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_005146274.1	PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain
YP_005146275.1	PFAM: Cell division protein ZapA
YP_005146276.1	PFAM: Metalloenzyme superfamily
YP_005146277.1	PFAM: Collagenase; Peptidase family U32
YP_005146278.1	PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_005146279.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain
YP_005146280.1	PFAM: NUDIX domain
YP_005146281.1	PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family
YP_005146282.1	PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family
YP_005146284.1	PFAM: Bacterial transcription activator, effector binding domain
YP_005146285.1	PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146287.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146288.1	PFAM: Melibiase
YP_005146293.1	TIGRFAM: radical SAM additional 4Fe4S-binding domain
YP_005146294.1	PFAM: Subtilase family
YP_005146295.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005146298.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; CHASE3 domain
YP_005146299.1	PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_005146300.1	PFAM: ABC transporter
YP_005146301.1	PFAM: Predicted permease (DUF2074)
YP_005146302.1	PFAM: Protein of unknown function (DUF1113)
YP_005146303.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146304.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146305.1	PFAM: Bacterial extracellular solute-binding protein
YP_005146306.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146307.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146308.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_005146309.1	PFAM: Transcription termination factor nusG
YP_005146310.1	PFAM: tRNA synthetases class I (M)
YP_005146312.1	PFAM: Permease family
YP_005146313.1	PFAM: Acetyl xylan esterase (AXE1)
YP_005146315.1	PFAM: Phosphoenolpyruvate carboxykinase
YP_005146316.1	PFAM: MarR family
YP_005146317.1	PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA
YP_005146319.1	PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA
YP_005146320.1	PFAM: Trehalose utilisation
YP_005146321.1	PFAM: Glucuronate isomerase
YP_005146322.1	PFAM: Protein of unknown function, DUF255; Glycosyl hydrolase family 76
YP_005146324.1	PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm)
YP_005146325.1	PFAM: Nitroreductase family
YP_005146327.1	PFAM: Helix-turn-helix; manually curated
YP_005146328.1	PFAM: Peptidase family M23
YP_005146329.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146330.1	PFAM: Methyltransferase small domain
YP_005146331.1	PFAM: Phosphoglycerate kinase
YP_005146332.1	PFAM: Helix-turn-helix
YP_005146334.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005146335.1	PFAM: Bacterial regulatory proteins, gntR family
YP_005146336.1	PFAM: ABC transporter
YP_005146338.1	PFAM: Ammonium Transporter Family
YP_005146341.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005146342.1	PFAM: Telomeric repeat-binding factor 2
YP_005146343.1	PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_005146344.1	PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family
YP_005146345.1	PFAM: NUDIX domain
YP_005146346.1	PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat
YP_005146347.1	PFAM: Dienelactone hydrolase family
YP_005146348.1	PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein
YP_005146349.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_005146350.1	PFAM: Heavy-metal-associated domain
YP_005146351.1	PFAM: Bacterial regulatory protein, arsR family
YP_005146352.1	PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG
YP_005146355.1	PFAM: Domain of Unknown Function (DUF350)
YP_005146356.1	PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau
YP_005146357.1	PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family
YP_005146358.1	PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_005146359.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005146360.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005146361.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005146362.1	PFAM: DRTGG domain; DHH family; DHHA2 domain; CBS domain
YP_005146363.1	PFAM: VTC domain
YP_005146365.1	PFAM: CotH protein
YP_005146366.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_005146367.1	PFAM: Protein of unknown function(DUF2089)
YP_005146369.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_005146370.1	PFAM: ZIP Zinc transporter
YP_005146371.1	PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_005146372.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005146373.1	PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_005146374.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_005146375.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005146376.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; Glycosyl transferase family 4; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_005146377.1	PFAM: OmpA family
YP_005146378.1	PFAM: MotA/TolQ/ExbB proton channel family
YP_005146380.1	PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_005146381.1	PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c
YP_005146382.1	PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b
YP_005146383.1	PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit
YP_005146384.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit
YP_005146385.1	PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_005146386.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit
YP_005146387.1	PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_005146389.1	PFAM: S-layer homology domain; Fibronectin type III domain
YP_005146390.1	PFAM: Bacterial Ig-like domain (group 2); S-layer homology domain
YP_005146395.1	PFAM: S-layer homology domain
YP_005146396.1	PFAM: Protein of unknown function (DUF1779)
YP_005146397.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_005146398.1	PFAM: Stage II sporulation protein; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain
YP_005146399.1	PFAM: Peptidase family M23
YP_005146400.1	PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_005146401.1	PFAM: Domain of unknown function (DUF1934)
YP_005146402.1	PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_005146403.1	PFAM: Dockerin type I repeat; Polysaccharide deacetylase
YP_005146404.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005146405.1	PFAM: S-layer homology domain
YP_005146406.1	PFAM: S-layer homology domain
YP_005146407.1	PFAM: Putative peptidoglycan binding domain; Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_005146408.1	PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_005146409.1	PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R
YP_005146410.1	PFAM: MgtC family
YP_005146411.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase
YP_005146412.1	PFAM: ABC transporter
YP_005146413.1	PFAM: ABC-2 type transporter
YP_005146414.1	PFAM: ABC-type uncharacterized transport system
YP_005146418.1	PFAM: Colicin V production protein
YP_005146419.1	PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_005146420.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_005146421.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005146422.1	PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_005146423.1	PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_005146424.1	PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG
YP_005146425.1	PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_005146426.1	PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_005146427.1	PFAM: Ribosomal protein L10
YP_005146428.1	PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_005146429.1	PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_005146430.1	PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_005146431.1	PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
YP_005146432.1	PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_005146433.1	PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_005146434.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_005146435.1	PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_005146436.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146437.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146438.1	PFAM: Bacterial extracellular solute-binding protein
YP_005146439.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146440.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146442.1	PFAM: Protein of unknown function (DUF1498)
YP_005146443.1	PFAM: Metallo-beta-lactamase superfamily; Flavodoxin
YP_005146446.1	PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR)
YP_005146447.1	PFAM: UvrB/uvrC motif
YP_005146448.1	PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain
YP_005146449.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif
YP_005146450.1	PFAM: Radical SAM superfamily; TIGRFAM: CLI_3235-class bacteriocin maturation radical SAM enzyme; radical SAM additional 4Fe4S-binding domain
YP_005146451.1	TIGRFAM: peptide maturation system protein, TIGR04066 family
YP_005146453.1	TIGRFAM: putative bacteriocin precursor, CLI_3235 family
YP_005146454.1	PFAM: Glycosyl transferase family 2
YP_005146455.1	PFAM: Glycosyl hydrolases family 15; TIGRFAM: oligosaccharide amylase
YP_005146456.1	PFAM: KaiC; TIGRFAM: DNA repair protein RadA
YP_005146457.1	PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region; Helix-hairpin-helix motif
YP_005146459.1	PFAM: CarD-like/TRCF domain
YP_005146460.1	PFAM: TRAM domain; PIN domain
YP_005146461.1	PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_005146462.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005146463.1	PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_005146464.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I
YP_005146465.1	PFAM: Cysteine-rich secretory protein family; Bacterial SH3 domain
YP_005146466.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_005146467.1	PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats); Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005146469.1	PFAM: GtrA-like protein
YP_005146470.1	PFAM: Predicted membrane protein (DUF2238)
YP_005146471.1	PFAM: UV-endonuclease UvdE; TIGRFAM: UV damage endonuclease UvdE
YP_005146473.1	PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_005146479.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005146480.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146481.1	PFAM: Sporulation and spore germination
YP_005146482.1	PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family
YP_005146483.1	PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic
YP_005146484.1	PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain
YP_005146485.1	TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain
YP_005146486.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_005146487.1	PFAM: Nucleotidyl transferase
YP_005146489.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_005146490.1	PFAM: Sulfatase
YP_005146491.1	PFAM: Shikimate kinase
YP_005146492.1	PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA
YP_005146493.1	PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase
YP_005146494.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005146496.1	PFAM: Protein of unknown function (DUF2953)
YP_005146497.1	PFAM: Sporulation protein YtfJ (Spore_YtfJ)
YP_005146498.1	PFAM: F5/8 type C domain; Domain of unknown function; Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat
YP_005146499.1	PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; histidyl-tRNA synthetase
YP_005146500.1	PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase
YP_005146501.1	PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_005146502.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_005146503.1	PFAM: Imidazoleglycerol-phosphate dehydratase
YP_005146504.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_005146505.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_005146506.1	PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_005146507.1	PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_005146508.1	PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_005146510.1	PFAM: Chaperonin 10 Kd subunit
YP_005146511.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_005146513.1	PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_005146514.1	PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA
YP_005146515.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_005146517.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005146519.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
YP_005146520.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146521.1	PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_005146522.1	PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_005146523.1	PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle
YP_005146524.1	PFAM: Ribosomal protein L23
YP_005146525.1	PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_005146526.1	PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_005146527.1	PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_005146528.1	PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_005146529.1	PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_005146530.1	PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_005146531.1	PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_005146532.1	PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_005146533.1	PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_005146534.1	PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_005146535.1	PFAM: Ribosomal protein S14p/S29e
YP_005146536.1	PFAM: Ribosomal protein S8
YP_005146537.1	PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_005146538.1	PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_005146539.1	PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_005146540.1	PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_005146541.1	PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_005146542.1	PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_005146543.1	PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases
YP_005146544.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_005146546.1	PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_005146547.1	PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_005146548.1	PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13
YP_005146549.1	PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_005146550.1	PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_005146551.1	PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_005146552.1	PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_005146553.1	PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit
YP_005146554.1	PFAM: Methyltransferase small domain
YP_005146555.1	PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal
YP_005146556.1	PFAM: Cobalt transport protein
YP_005146557.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_005146558.1	PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_005146559.1	PFAM: Ribosomal protein S9/S16
YP_005146560.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005146561.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_005146562.1	PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005146563.1	PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005146565.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005146566.1	PFAM: Transcriptional regulator PadR-like family
YP_005146568.1	PFAM: ABC transporter
YP_005146569.1	PFAM: ABC-2 type transporter
YP_005146570.1	PFAM: ABC-2 type transporter
YP_005146571.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005146572.1	PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_005146573.1	PFAM: Thioesterase domain
YP_005146574.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain
YP_005146576.1	PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_005146577.1	PFAM: Amidohydrolase family
YP_005146578.1	PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family
YP_005146579.1	PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ
YP_005146580.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase
YP_005146581.1	PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease
YP_005146582.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005146585.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_005146586.1	PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit
YP_005146587.1	PFAM: Calcineurin-like phosphoesterase
YP_005146588.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_005146589.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_005146590.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_005146591.1	PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease
YP_005146592.1	PFAM: Predicted permease
YP_005146593.1	PFAM: ABC transporter
YP_005146594.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146595.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005146596.1	PFAM: Staphylococcal nuclease homologue
YP_005146597.1	PFAM: Bacteriophage holin
YP_005146598.1	PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family
YP_005146599.1	PFAM: Transglycosylase SLT domain
YP_005146601.1	PFAM: Protein of unknown function (DUF402)
YP_005146602.1	PFAM: PHP domain
YP_005146603.1	PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_005146604.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005146605.1	PFAM: Domain of unknown function (DUF955)
YP_005146606.1	PFAM: DNA mismatch repair enzyme MutH
YP_005146607.1	PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm)
YP_005146609.1	PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_005146612.1	PFAM: Helix-turn-helix
YP_005146613.1	PFAM: Helix-turn-helix
YP_005146614.1	PFAM: Helix-turn-helix
YP_005146615.1	PFAM: Helix-turn-helix
YP_005146616.1	PFAM: Helix-turn-helix
YP_005146618.1	PFAM: Helix-turn-helix
YP_005146620.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_005146624.1	PFAM: Protein of unknown function (DUF1492)
YP_005146625.1	PFAM: Phage integrase family
YP_005146628.1	PFAM: Phage Terminase
YP_005146629.1	PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family
YP_005146630.1	PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family
YP_005146631.1	PFAM: Phage capsid family
YP_005146640.1	PFAM: Phage tail protein
YP_005146644.1	PFAM: Phage uncharacterised protein (Phage_XkdX)
YP_005146646.1	PFAM: Domain of unknown function (DUF1906)
YP_005146648.1	PFAM: Phage regulatory protein Rha (Phage_pRha)
YP_005146651.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02954 family; RNA polymerase sigma factor, sigma-70 family
YP_005146653.1	PFAM: Dockerin type I repeat
YP_005146656.1	PFAM: DNA/RNA non-specific endonuclease
YP_005146657.1	PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form
YP_005146659.1	PFAM: Dockerin type I repeat
YP_005146661.1	PFAM: Copper amine oxidase N-terminal domain
YP_005146662.1	PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; Carbohydrate binding domain; N-terminal ig-like domain of cellulase
YP_005146663.1	PFAM: NlpC/P60 family; Putative peptidoglycan binding domain
YP_005146664.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005146665.1	PFAM: LysE type translocator; manually curated
YP_005146666.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_005146669.1	PFAM: Protein of unknown function (DUF990)
YP_005146670.1	PFAM: ABC transporter
YP_005146671.1	PFAM: Protein of unknown function (DUF990)
YP_005146672.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
YP_005146673.1	PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_005146674.1	PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_005146675.1	PFAM: Phosphopantetheine attachment site
YP_005146676.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005146677.1	PFAM: B3/4 domain
YP_005146678.1	PFAM: Aldehyde dehydrogenase family
YP_005146682.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase
YP_005146683.1	PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family
YP_005146685.1	PFAM: Helicase conserved C-terminal domain; UvrD/REP helicase; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family
YP_005146688.1	PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_005146689.1	PFAM: Branched-chain amino acid transport protein (AzlD)
YP_005146690.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_005146691.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_005146692.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_005146694.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)
YP_005146695.1	PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain
YP_005146696.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005146697.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005146698.1	PFAM: ABC transporter
YP_005146699.1	PFAM: Amidohydrolase family; TIGRFAM: isoaspartyl dipeptidase IadA
YP_005146700.1	PFAM: Peptidase family M48
YP_005146703.1	PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1
YP_005146704.1	PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; glycyl-radical enzyme activating protein family
YP_005146706.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_005146707.1	PFAM: Glycosyltransferase family 36; Uncharacterized protein conserved in bacteria (DUF2329); Putative carbohydrate binding domain; Glycosyltransferase 36 associated family
YP_005146708.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type
YP_005146709.1	PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type
YP_005146710.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase
YP_005146712.1	PFAM: SEC-C motif
YP_005146713.1	PFAM: Citrate synthase
YP_005146714.1	PFAM: Sodium:neurotransmitter symporter family
YP_005146715.1	PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_005146716.1	PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_005146718.1	PFAM: PRC-barrel domain
YP_005146719.1	PFAM: Negative regulator of genetic competence (MecA)
YP_005146720.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_005146721.1	PFAM: Protein of unknown function (DUF2466); Helix-hairpin-helix motif; TIGRFAM: DNA repair protein radc
YP_005146722.1	PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_005146723.1	PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_005146724.1	PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD
YP_005146725.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_005146726.1	PFAM: Septum formation inhibitor MinC, C-terminal domain; Septum formation inhibitor MinC, N-terminal domain; TIGRFAM: septum site-determining protein MinC
YP_005146727.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD
YP_005146728.1	PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE
YP_005146729.1	PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase
YP_005146730.1	PFAM: Peptidase family M23
YP_005146731.1	PFAM: Peptidase family M50
YP_005146732.1	PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_005146733.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric
YP_005146734.1	PFAM: Flavodoxin
YP_005146737.1	PFAM: Calcineurin-like phosphoesterase
YP_005146738.1	PFAM: Domain of unknown function DUF20
YP_005146739.1	PFAM: D-ala-D-ala dipeptidase; L,D-transpeptidase catalytic domain
YP_005146740.1	PFAM: Sulfite exporter TauE/SafE
YP_005146741.1	PFAM: Sulfite exporter TauE/SafE
YP_005146742.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005146743.1	PFAM: Protein of unknown function DUF58
YP_005146745.1	PFAM: Sugar-specific transcriptional regulator TrmB; Archaeal transcriptional regulator TrmB
YP_005146746.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_005146747.1	PFAM: Dihydrodipicolinate reductase, N-terminus; TIGRFAM: diaminopimelate dehydrogenase
YP_005146750.1	PFAM: Ricin-type beta-trefoil lectin domain
YP_005146751.1	PFAM: Transposase DDE domain; Transposase domain (DUF772)
YP_005146752.1	PFAM: Methyltransferase domain
YP_005146754.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005146755.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005146757.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005146758.1	PFAM: Beta-lactamase
YP_005146760.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005146761.1	PFAM: ABC transporter
YP_005146762.1	PFAM: Protein of unknown function (DUF990)
YP_005146763.1	PFAM: Protein of unknown function (DUF990)
YP_005146764.1	PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain
YP_005146765.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005146767.1	PFAM: AMP-binding enzyme
YP_005146770.1	PFAM: Thymidylate kinase
YP_005146772.1	PFAM: Thioesterase domain
YP_005146773.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_005146774.1	PFAM: ATP-grasp domain
YP_005146775.1	PFAM: Phosphopantetheine attachment site
YP_005146777.1	PFAM: CYTH domain
YP_005146779.1	PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005146780.1	PFAM: Protein of unknown function (DUF2935)
YP_005146781.1	PFAM: Aldo/keto reductase family
YP_005146783.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_005146784.1	PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative
YP_005146786.1	TIGRFAM: small, acid-soluble spore protein tlp
YP_005146788.1	PFAM: Sodium:neurotransmitter symporter family
YP_005146789.1	PFAM: alpha/beta hydrolase fold
YP_005146791.1	PFAM: Hemerythrin HHE cation binding domain
YP_005146792.1	PFAM: Nitroreductase family
YP_005146793.1	PFAM: Phage Tail Collar Domain
YP_005146794.1	PFAM: Phage Tail Collar Domain
YP_005146795.1	PFAM: Phage Tail Collar Domain
YP_005146797.1	PFAM: Calx-beta domain; S-layer homology domain
YP_005146798.1	PFAM: Fungalysin/Thermolysin Propeptide Motif; Thermolysin metallopeptidase, alpha-helical domain; Thermolysin metallopeptidase, catalytic domain
YP_005146799.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase
YP_005146800.1	PFAM: Putative Phosphatase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_005146801.1	PFAM: 3-dehydroquinate synthase
YP_005146802.1	PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase
YP_005146803.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005146804.1	PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain
YP_005146805.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005146806.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005146807.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005146808.1	PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B
YP_005146809.1	PFAM: Protein of unknown function (DUF1294)
YP_005146810.1	PFAM: FHA domain
YP_005146811.1	PFAM: Cell cycle protein
YP_005146812.1	PFAM: Penicillin binding protein transpeptidase domain
YP_005146814.1	PFAM: Methylenetetrahydrofolate reductase; Homocysteine S-methyltransferase
YP_005146815.1	PFAM: Pterin binding enzyme
YP_005146816.1	PFAM: AMP-binding enzyme
YP_005146817.1	PFAM: Inositol monophosphatase family
YP_005146818.1	PFAM: Radical SAM superfamily; TIGRFAM: CLI_3235-class bacteriocin maturation radical SAM enzyme; radical SAM additional 4Fe4S-binding domain
YP_005146819.1	PFAM: Protein of unknown function (DUF1611); TIGRFAM: peptide maturation system protein, TIGR04066 family
YP_005146820.1	TIGRFAM: peptide maturation system acyl carrier-related protein
YP_005146821.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005146822.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146823.1	PFAM: MutS domain V; MutS domain III
YP_005146825.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005146826.1	PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_005146827.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only
YP_005146829.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005146830.1	PFAM: PQQ enzyme repeat
YP_005146831.1	PFAM: PQQ enzyme repeat
YP_005146832.1	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_005146833.1	PFAM: Acyl-ACP thioesterase
YP_005146835.1	PFAM: DUF218 domain
YP_005146837.1	PFAM: Bacterial extracellular solute-binding protein
YP_005146838.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146839.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146840.1	PFAM: Glycosyl hydrolases family 31
YP_005146841.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_005146842.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146843.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146844.1	PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain; Beta-galactosidase
YP_005146845.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme
YP_005146846.1	PFAM: Integral membrane protein (intg_mem_TP0381); TIGRFAM: conserved hypothetical integral membrane protein TIGR02206
YP_005146847.1	PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase
YP_005146848.1	PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; UbiD family decarboxylases
YP_005146849.1	PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase
YP_005146850.1	PFAM: Peptidase M16C associated; Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005146851.1	PFAM: NMT1/THI5 like
YP_005146852.1	PFAM: Nitrogen regulatory protein P-II
YP_005146854.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_005146855.1	PFAM: Small Multidrug Resistance protein
YP_005146856.1	PFAM: Sodium/hydrogen exchanger family
YP_005146857.1	PFAM: ABC transporter
YP_005146858.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146859.1	PFAM: Major Facilitator Superfamily
YP_005146860.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005146861.1	PFAM: MarR family
YP_005146863.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005146864.1	PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_005146865.1	PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005146866.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal
YP_005146867.1	PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
YP_005146868.1	PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
YP_005146869.1	PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
YP_005146870.1	PFAM: Glutamine amidotransferases class-II
YP_005146871.1	PFAM: Conserved region in glutamate synthase
YP_005146872.1	PFAM: 4Fe-4S binding domain; manually curated
YP_005146873.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005146874.1	PFAM: GXGXG motif
YP_005146875.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_005146876.1	PFAM: Response regulator receiver domain; ANTAR domain
YP_005146877.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_005146878.1	PFAM: Nitrogen regulatory protein P-II
YP_005146879.1	PFAM: Arginase family; TIGRFAM: agmatinase
YP_005146881.1	PFAM: S-adenosylmethionine-dependent methyltransferase
YP_005146882.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_005146883.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_005146884.1	PFAM: Putative RNA methylase family UPF0020; THUMP domain
YP_005146885.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_005146886.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_005146887.1	PFAM: Shikimate kinase
YP_005146888.1	PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A
YP_005146889.1	PFAM: Bacterial DNA-binding protein
YP_005146890.1	PFAM: Universal stress protein family
YP_005146891.1	PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
YP_005146892.1	PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region
YP_005146893.1	PFAM: Domain of unknown function (DUF1858); TIGRFAM: hydrid cluster protein-associated redox disulfide domain
YP_005146894.1	PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_005146896.1	PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_005146897.1	PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_005146898.1	PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase
YP_005146899.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_005146900.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_005146901.1	PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E
YP_005146902.1	PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_005146903.1	PFAM: Bacterial type II secretion system protein F domain
YP_005146904.1	PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_005146905.1	PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family
YP_005146906.1	PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM
YP_005146908.1	PFAM: Fimbrial assembly protein (PilN)
YP_005146912.1	PFAM: Cellulose binding domain; PA14 domain; Fibronectin type III domain
YP_005146914.1	PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
YP_005146915.1	TIGRFAM: flagellar operon protein TIGR03826
YP_005146917.1	PFAM: CARDB
YP_005146918.1	PFAM: Dockerin type I repeat; GDSL-like Lipase/Acylhydrolase
YP_005146919.1	PFAM: VanZ like family
YP_005146920.1	PFAM: Condensation domain
YP_005146921.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_005146922.1	PFAM: Phosphotransferase enzyme family; TIGRFAM: Fibrobacter succinogenes paralogous family TIGR02172
YP_005146923.1	PFAM: Condensation domain
YP_005146924.1	PFAM: short chain dehydrogenase
YP_005146925.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_005146926.1	PFAM: Phosphopantetheine attachment site
YP_005146927.1	PFAM: Condensation domain
YP_005146928.1	PFAM: AMP-binding enzyme
YP_005146929.1	PFAM: Pyridoxal-phosphate dependent enzyme
YP_005146930.1	PFAM: Phosphoribosyl transferase domain
YP_005146931.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_005146932.1	PFAM: EamA-like transporter family; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
YP_005146933.1	PFAM: Major Facilitator Superfamily
YP_005146934.1	PFAM: S-layer homology domain
YP_005146940.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_005146941.1	PFAM: ABC transporter; Beta-lactamase; TIGRFAM: cyclic peptide transporter
YP_005146942.1	PFAM: NLI interacting factor-like phosphatase; TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC
YP_005146943.1	PFAM: Phosphopantetheine attachment site
YP_005146944.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_005146945.1	PFAM: Phosphopantetheine attachment site
YP_005146946.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005146947.1	PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_005146948.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_005146949.1	PFAM: Acetyltransferase (GNAT) family
YP_005146950.1	PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: amino acid adenylation domain
YP_005146951.1	PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: amino acid adenylation domain
YP_005146952.1	PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_005146953.1	PFAM: Peptidase family U32
YP_005146954.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain
YP_005146955.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_005146956.1	PFAM: Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005146957.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain
YP_005146958.1	PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC
YP_005146959.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_005146960.1	PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II
YP_005146961.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_005146962.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; 3-amino-5-hydroxybenoic acid synthesis related protein; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005146963.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005146964.1	PFAM: Alpha-L-arabinofuranosidase C-terminus
YP_005146965.1	PFAM: Bacterial regulatory protein, arsR family
YP_005146966.1	PFAM: family
YP_005146967.1	PFAM: ABC transporter
YP_005146968.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005146969.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005146970.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146971.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146972.1	PFAM: Dockerin type I repeat; Glycosyl hydrolase family 10; Carbohydrate binding module (family 6)
YP_005146973.1	PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 43
YP_005146974.1	PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Putative esterase
YP_005146975.1	PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 43
YP_005146976.1	PFAM: Glycosyl hydrolase family 62; Dockerin type I repeat; Carbohydrate binding module (family 6)
YP_005146977.1	PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 43
YP_005146978.1	PFAM: Dockerin type I repeat; Beta/Gamma crystallin; Putative glycosyl hydrolase of unknown function (DUF1680); Carbohydrate binding domain
YP_005146979.1	PFAM: Melibiase; Dockerin type I repeat; Carbohydrate binding module (family 6)
YP_005146980.1	PFAM: domain; Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain
YP_005146981.1	PFAM: Domain of unknown function (DUF303); Glycosyl hydrolase family 62; Dockerin type I repeat; Carbohydrate binding module (family 6)
YP_005146982.1	PFAM: F5/8 type C domain; Dockerin type I repeat; Carbohydrate binding module (family 6)
YP_005146983.1	PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6)
YP_005146984.1	PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Putative esterase
YP_005146986.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_005146988.1	PFAM: Dockerin type I repeat; Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family
YP_005146989.1	PFAM: Dockerin type I repeat; Pectinesterase
YP_005146990.1	PFAM: Dockerin type I repeat
YP_005146991.1	PFAM: ABC transporter
YP_005146992.1	PFAM: ABC transporter
YP_005146993.1	PFAM: Integrase core domain; manually curated; non-canonical start codon
YP_005146994.1	PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat
YP_005146995.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005146996.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005146997.1	PFAM: Bacterial extracellular solute-binding protein
YP_005146998.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005146999.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005147000.1	PFAM: Alpha-L-arabinofuranosidase C-terminus
YP_005147002.1	PFAM: Glycosyl hydrolases family 43
YP_005147003.1	PFAM: Glycosyl hydrolases family 39
YP_005147004.1	PFAM: Putative esterase
YP_005147006.1	PFAM: Domain of unknown function (DUF303); Glycosyl hydrolases family 2, sugar binding domain
YP_005147007.1	PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM
YP_005147008.1	PFAM: Cobalt transport protein component CbiN; TIGRFAM: cobalt transport protein
YP_005147009.1	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ
YP_005147010.1	PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit
YP_005147011.1	PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD
YP_005147012.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase
YP_005147013.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase
YP_005147014.1	PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal
YP_005147015.1	PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: glutamyl-tRNA reductase
YP_005147016.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase
YP_005147017.1	PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase; siroheme synthase, N-terminal domain
YP_005147018.1	PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_005147019.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_005147020.1	PFAM: Delta-aminolevulinic acid dehydratase
YP_005147021.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_005147022.1	PFAM: CbiX
YP_005147023.1	PFAM: Met-10+ like-protein; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
YP_005147024.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase
YP_005147025.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ
YP_005147026.1	PFAM: Precorrin-8X methylmutase
YP_005147027.1	PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD
YP_005147028.1	PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase
YP_005147029.1	PFAM: Phosphotransferase enzyme family; TIGRFAM: 5-methylthioribose kinase
YP_005147030.1	PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase
YP_005147031.1	PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase
YP_005147032.1	PFAM: Streptomycin adenylyltransferase
YP_005147033.1	PFAM: Methyltransferase domain
YP_005147034.1	PFAM: Protein of unknown function (DUF1232)
YP_005147036.1	PFAM: Acetyltransferase (GNAT) family
YP_005147037.1	PFAM: Glycosyl hydrolases family 8; Dockerin type I repeat
YP_005147038.1	PFAM: Penicillinase repressor
YP_005147039.1	PFAM: Pentapeptide repeats (8 copies)
YP_005147041.1	PFAM: Reverse transcriptase (RNA-dependent DNA polymerase)
YP_005147042.1	PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_005147044.1	PFAM: CotH protein
YP_005147045.1	PFAM: VTC domain
YP_005147047.1	PFAM: PAP2 superfamily
YP_005147048.1	PFAM: Glycosyl transferase family 2
YP_005147050.1	PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase
YP_005147051.1	PFAM: Dihydrofolate reductase
YP_005147052.1	PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_005147053.1	PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_005147054.1	PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_005147055.1	PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family
YP_005147056.1	PFAM: PilZ domain
YP_005147057.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005147058.1	PFAM: ABC transporter; Predicted permease
YP_005147059.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein
YP_005147060.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2344); TIGRFAM: radical SAM-linked protein
YP_005147061.1	PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_005147062.1	PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_005147063.1	PFAM: Protein of unknown function (DUF464)
YP_005147064.1	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_005147065.1	PFAM: GTPase of unknown function; GTP1/OBG; Domain of unknown function (DUF1967); TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension; small GTP-binding protein domain
YP_005147066.1	PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family
YP_005147069.1	TIGRFAM: iron-sulfur cluster binding protein, putative
YP_005147070.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_005147071.1	PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_005147072.1	PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_005147073.1	PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_005147074.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_005147075.1	PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase
YP_005147076.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type
YP_005147077.1	TIGRFAM: uncharacterized protein TIGR03905
YP_005147080.1	PFAM: Stage II sporulation protein E (SpoIIE); LysM domain
YP_005147082.1	PFAM: Stress responsive A/B Barrel Domain
YP_005147083.1	PFAM: Polysaccharide deacetylase
YP_005147086.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_005147087.1	PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_005147088.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_005147089.1	PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_005147090.1	PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_005147091.1	PFAM: Uncharacterized BCR, COG1636
YP_005147092.1	PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase
YP_005147093.1	PFAM: Sporulation and spore germination
YP_005147094.1	PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
YP_005147095.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_005147096.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family
YP_005147097.1	PFAM: Protein of unknown function (DUF2971)
YP_005147099.1	PFAM: Cell Wall Hydrolase
YP_005147100.1	PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_005147101.1	PFAM: 4Fe-4S binding domain
YP_005147102.1	PFAM: Cyclic nucleotide-binding domain
YP_005147103.1	PFAM: SPFH domain / Band 7 family
YP_005147105.1	PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_005147106.1	PFAM: HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism; uncharacterized domain HDIG
YP_005147108.1	PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein
YP_005147109.1	PFAM: ABC transporter
YP_005147110.1	manually curated
YP_005147111.1	PFAM: AMP-binding enzyme
YP_005147112.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_005147113.1	PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein
YP_005147114.1	PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase
YP_005147115.1	PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase
YP_005147118.1	PFAM: Copper amine oxidase N-terminal domain; S-layer homology domain
YP_005147119.1	PFAM: Transcriptional regulator PadR-like family; Virulence activator alpha C-term
YP_005147120.1	PFAM: Metallo-beta-lactamase superfamily
YP_005147121.1	PFAM: GAF domain
YP_005147124.1	PFAM: NfeD-like
YP_005147125.1	PFAM: SPFH domain / Band 7 family
YP_005147126.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005147127.1	PFAM: ABC transporter
YP_005147128.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005147129.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005147130.1	PFAM: S-layer homology domain; Uncharacterised Sugar-binding Domain
YP_005147131.1	PFAM: Bacterial extracellular solute-binding protein
YP_005147132.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005147133.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005147134.1	PFAM: Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain
YP_005147135.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005147137.1	PFAM: Ricin-type beta-trefoil lectin domain; Domain of unknown function; Carbohydrate binding module (family 6); S-layer homology domain; Glycosyl hydrolases family 43; TIGRFAM: Listeria/Bacterioides repeat
YP_005147138.1	PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 2
YP_005147139.1	PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase
YP_005147140.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_005147141.1	PFAM: MarR family
YP_005147142.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005147143.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005147144.1	PFAM: Protein of unknown function (DUF1653)
YP_005147146.1	PFAM: Nitrogen regulatory protein P-II
YP_005147147.1	PFAM: domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit
YP_005147148.1	PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; indolepyruvate ferredoxin oxidoreductase, beta subunit
YP_005147149.1	PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase
YP_005147150.1	PFAM: AMP-binding enzyme
YP_005147151.1	PFAM: HlyD family secretion protein
YP_005147152.1	PFAM: ABC transporter
YP_005147153.1	PFAM: Predicted permease
YP_005147154.1	PFAM: S-layer homology domain
YP_005147155.1	PFAM: Protein of unknown function (DUF3243)
YP_005147156.1	PFAM: FMN-binding domain
YP_005147157.1	PFAM: Protein of unknown function (DUF1393)
YP_005147160.1	PFAM: Toprim domain; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus
YP_005147161.1	PFAM: DNA gyrase/topoisomerase IV, subunit A
YP_005147163.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_005147164.1	PFAM: Glucose inhibited division protein A; FAD dependent oxidoreductase
YP_005147165.1	PFAM: QueT transporter
YP_005147166.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: xanthine phosphoribosyltransferase
YP_005147167.1	PFAM: Basic membrane protein
YP_005147168.1	PFAM: ABC transporter
YP_005147169.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005147170.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005147172.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_005147173.1	PFAM: Domain of unknown function DUF
YP_005147174.1	PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_005147175.1	PFAM: LrgA family
YP_005147176.1	PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein
YP_005147178.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005147179.1	PFAM: Calcineurin-like phosphoesterase
YP_005147180.1	PFAM: HD domain
YP_005147183.1	PFAM: Helix-turn-helix
YP_005147186.1	PFAM: Accessory gene regulator B
YP_005147187.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005147191.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_005147197.1	PFAM: GIY-YIG catalytic domain
YP_005147200.1	PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm)
YP_005147202.1	PFAM: DNA methylase
YP_005147205.1	PFAM: Domain of Unknown Function (DUF1599)
YP_005147207.1	PFAM: YopX protein; TIGRFAM: phage uncharacterized protein TIGR01671
YP_005147212.1	PFAM: Sigma-70, region 4
YP_005147213.1	PFAM: Phage integrase family
YP_005147215.1	manually curated
YP_005147216.1	PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family
YP_005147217.1	PFAM: Phage Terminase
YP_005147218.1	PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family
YP_005147220.1	PFAM: Clp protease
YP_005147221.1	PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family
YP_005147223.1	PFAM: Phage QLRG family, putative DNA packaging
YP_005147224.1	PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family
YP_005147225.1	PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family
YP_005147226.1	PFAM: Protein of unknown function (DUF3168)
YP_005147227.1	TIGRFAM: phage major tail protein, phi13 family
YP_005147230.1	TIGRFAM: tape measure domain
YP_005147231.1	PFAM: Phage tail protein
YP_005147232.1	PFAM: Protein of unknown function (DUF1142); TIGRFAM: phage minor structural protein, N-terminal region
YP_005147236.1	PFAM: NlpC/P60 family
YP_005147238.1	PFAM: Protein of unknown function (DUF2971)
YP_005147242.1	PFAM: Recombinase; Resolvase, N terminal domain; manually curated
YP_005147245.1	PFAM: Dynamin family
YP_005147248.1	PFAM: TM2 domain
YP_005147249.1	PFAM: SPFH domain / Band 7 family
YP_005147250.1	PFAM: Cyclic nucleotide-binding domain
YP_005147251.1	PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase
YP_005147252.1	PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein
YP_005147253.1	PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family
YP_005147254.1	PFAM: ZIP Zinc transporter
YP_005147255.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005147256.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005147257.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005147258.1	PFAM: Aldose 1-epimerase
YP_005147260.1	PFAM: MutS domain V
YP_005147261.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3
YP_005147262.1	PFAM: Phosphoribulokinase / Uridine kinase family
YP_005147263.1	PFAM: DRTGG domain
YP_005147264.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_005147265.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005147266.1	PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Protein of unknown function, DUF608; Glycosyltransferase 36 associated family
YP_005147270.1	PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_005147271.1	PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_005147272.1	PFAM: Small, acid-soluble spore proteins, alpha/beta type
YP_005147273.1	PFAM: Phosphoglucose isomerase
YP_005147275.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_005147277.1	PFAM: Patatin-like phospholipase
YP_005147278.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_005147280.1	PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase
YP_005147281.1	PFAM: Protein of unknown function (DUF1393)
YP_005147283.1	PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD
YP_005147285.1	PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_005147287.1	PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_005147288.1	PFAM: Tryptophan RNA-binding attenuator protein
YP_005147290.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_005147291.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_005147293.1	PFAM: DnaJ domain
YP_005147296.1	PFAM: Cupin domain; Helix-turn-helix
YP_005147297.1	PFAM: AMP-binding enzyme
YP_005147298.1	PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein
YP_005147299.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_005147300.1	PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family
YP_005147301.1	PFAM: O-methyltransferase
YP_005147302.1	PFAM: Peptidase family U32
YP_005147303.1	PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD
YP_005147304.1	PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-C/DVULG; CRISPR-associated protein Cas5, N-terminal domain
YP_005147305.1	PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG
YP_005147306.1	PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG
YP_005147307.1	PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4
YP_005147308.1	PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG; CRISPR-associated endonuclease Cas1
YP_005147309.1	PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2
YP_005147310.1	PFAM: Acetyltransferase (GNAT) family
YP_005147311.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_005147316.1	PFAM: Cellulose binding domain; HYR domain
YP_005147322.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005147324.1	PFAM: Phage tail sheath protein
YP_005147325.1	PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein
YP_005147327.1	manually curated; non-canonical start codon
YP_005147328.1	PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein
YP_005147331.1	PFAM: Phage late control gene D protein (GPD)
YP_005147332.1	PFAM: Phage-related baseplate assembly protein
YP_005147333.1	PFAM: PAAR motif
YP_005147334.1	PFAM: Gene 25-like lysozyme
YP_005147335.1	PFAM: Baseplate J-like protein; TIGRFAM: conserved hypothetical protein, phage tail-like region
YP_005147337.1	TIGRFAM: phage tail protein domain
YP_005147343.1	PFAM: Protein of unknown function (DUF1212)
YP_005147344.1	PFAM: Protein of unknown function (DUF1212)
YP_005147345.1	PFAM: L,D-transpeptidase catalytic domain
YP_005147347.1	PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_005147348.1	PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_005147349.1	PFAM: CAAX amino terminal protease family
YP_005147350.1	PFAM: CAAX amino terminal protease family
YP_005147351.1	PFAM: Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; Beta-ketoacyl synthase, C-terminal domain
YP_005147352.1	PFAM: Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain
YP_005147353.1	PFAM: Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720
YP_005147359.1	PFAM: Bacterial transcription activator, effector binding domain
YP_005147362.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005147363.1	PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26
YP_005147366.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_005147367.1	PFAM: ABC transporter
YP_005147368.1	PFAM: Protein of unknown function (DUF1048)
YP_005147369.1	PFAM: Protein of unknown function (DUF1048)
YP_005147370.1	PFAM: Transcriptional regulator PadR-like family
YP_005147373.1	PFAM: Methyltransferase domain
YP_005147374.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005147375.1	PFAM: Dockerin type I repeat
YP_005147376.1	PFAM: Uncharacterised protein family (UPF0160)
YP_005147378.1	PFAM: Methyltransferase domain
YP_005147380.1	PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005147390.1	PFAM: NADPH-dependent FMN reductase
YP_005147394.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005147395.1	PFAM: Cellulase (glycosyl hydrolase family 5); Carbohydrate binding domain (family 17/28); S-layer homology domain
YP_005147397.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_005147402.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005147403.1	PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_005147405.1	PFAM: CHC2 zinc finger
YP_005147406.1	PFAM: N-6 DNA Methylase
YP_005147407.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005147409.1	PFAM: HNH endonuclease
YP_005147416.1	PFAM: TraG/TraD family
YP_005147417.1	PFAM: FRG domain
YP_005147427.1	PFAM: Type II/IV secretion system protein
YP_005147435.1	PFAM: S-layer homology domain
YP_005147437.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_005147439.1	PFAM: Domain of unknown function DUF87
YP_005147440.1	PFAM: Peptidase family M23
YP_005147444.1	PFAM: Regulator of chromosome condensation (RCC1) repeat
YP_005147446.1	PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_005147447.1	PFAM: Domain of unknown function (DUF1871)
YP_005147450.1	PFAM: Calcineurin-like phosphoesterase
YP_005147452.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005147453.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_005147455.1	PFAM: Helix-turn-helix
YP_005147458.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005147459.1	PFAM: Dockerin type I repeat; PKD domain
YP_005147460.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005147461.1	PFAM: Manganese containing catalase
YP_005147465.1	PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005147466.1	PFAM: ABC transporter
YP_005147467.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005147468.1	PFAM: NMT1/THI5 like
YP_005147469.1	PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit
YP_005147471.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005147472.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005147473.1	PFAM: Putative glycosyl hydrolase of unknown function (DUF1680)
YP_005147474.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005147476.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005147477.1	PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_005147478.1	PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_005147479.1	PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_005147480.1	PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_005147482.1	PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_005147483.1	PFAM: Cytidylyltransferase family
YP_005147484.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_005147485.1	PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP
YP_005147486.1	PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_005147487.1	PFAM: DNA polymerase III polC-type N-terminus; Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, alpha chain, Gram-positive type; DNA polymerase III, epsilon subunit, Proteobacterial
YP_005147488.1	PFAM: Uncharacterised BCR, YhbC family COG0779
YP_005147489.1	PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA
YP_005147490.1	PFAM: Protein of unknown function (DUF448)
YP_005147491.1	PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
YP_005147492.1	PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_005147493.1	PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_005147494.1	PFAM: DHH family; DHHA1 domain
YP_005147495.1	PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_005147496.1	PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase
YP_005147497.1	PFAM: Carbamoyltransferase; HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF
YP_005147498.1	PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF
YP_005147499.1	PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD
YP_005147500.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE
YP_005147501.1	PFAM: ABC transporter
YP_005147502.1	PFAM: Yip1 domain
YP_005147503.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_005147504.1	PFAM: Predicted permease
YP_005147506.1	PFAM: Peptidase M16 inactive domain
YP_005147507.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005147508.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_005147509.1	PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA
YP_005147510.1	PFAM: MraZ protein; TIGRFAM: mraZ protein
YP_005147511.1	PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_005147512.1	PFAM: Cell division protein FtsL
YP_005147513.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D
YP_005147514.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase
YP_005147515.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_005147516.1	PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_005147517.1	PFAM: Cell cycle protein; TIGRFAM: stage V sporulation protein E; cell division protein FtsW
YP_005147518.1	PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_005147519.1	PFAM: Small, acid-soluble spore proteins, alpha/beta type
YP_005147520.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_005147521.1	PFAM: Monogalactosyldiacylglycerol (MGDG) synthase
YP_005147522.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_005147523.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005147524.1	PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain
YP_005147525.1	PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH
YP_005147526.1	PFAM: SpoVR like protein
YP_005147527.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein
YP_005147528.1	PFAM: AMP-binding enzyme
YP_005147529.1	PFAM: Cupin domain; Helix-turn-helix
YP_005147530.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005147531.1	PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_005147532.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005147533.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II
YP_005147534.1	PFAM: Xylose isomerase-like TIM barrel
YP_005147536.1	PFAM: Dockerin type I repeat
YP_005147537.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005147538.1	PFAM: Type II/IV secretion system protein
YP_005147539.1	PFAM: Bacterial type II secretion system protein F domain
YP_005147540.1	PFAM: Bacterial type II secretion system protein F domain
YP_005147548.1	PFAM: Protein kinase domain
YP_005147551.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2326)
YP_005147552.1	PFAM: Helix-turn-helix
YP_005147556.1	PFAM: Phage integrase family
YP_005147559.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005147560.1	PFAM: TadE-like protein
YP_005147562.1	PFAM: TadE-like protein
YP_005147563.1	PFAM: Type IV leader peptidase family
YP_005147564.1	PFAM: FHA domain
YP_005147565.1	PFAM: Type IV leader peptidase family
YP_005147566.1	PFAM: Patatin-like phospholipase
YP_005147567.1	PFAM: EamA-like transporter family
YP_005147568.1	PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_005147570.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005147572.1	PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease)
YP_005147574.1	PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family
YP_005147575.1	PFAM: Bacillus/Clostridium GerA spore germination protein
YP_005147576.1	PFAM: 3D domain
YP_005147577.1	PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_005147578.1	PFAM: Transposase DDE domain; Transposase domain (DUF772)
YP_005147579.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_005147580.1	PFAM: Bacillus/Clostridium GerA spore germination protein
YP_005147581.1	PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease)
YP_005147582.1	PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family
YP_005147584.1	PFAM: ACT domain
YP_005147585.1	PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_005147586.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_005147587.1	PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain
YP_005147588.1	PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase
YP_005147589.1	PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_005147590.1	PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_005147591.1	PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_005147592.1	TIGRFAM: putative membrane protein, TIGR04086 family; integral membrane protein, TIGR04097 family
YP_005147593.1	TIGRFAM: rSAM-modified six-cysteine peptide SCIFF
YP_005147594.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; six-Cys-in-45 modification radical SAM protein
YP_005147596.1	PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family
YP_005147597.1	PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_005147600.1	PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core
YP_005147601.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_005147603.1	PFAM: Family of unknown function (DUF633)
YP_005147604.1	PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family
YP_005147605.1	PFAM: Cell division protein ZapA
YP_005147607.1	PFAM: Amidohydrolase
YP_005147609.1	PFAM: NADPH-dependent FMN reductase
YP_005147610.1	PFAM: ThiF family
YP_005147612.1	PFAM: MutS domain V
YP_005147614.1	PFAM: domain
YP_005147615.1	PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005147616.1	PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase
YP_005147617.1	PFAM: ABC transporter
YP_005147618.1	PFAM: Predicted permease
YP_005147619.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005147620.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005147621.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal
YP_005147622.1	PFAM: Transglutaminase-like superfamily
YP_005147625.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005147626.1	PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB
YP_005147628.1	PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC
YP_005147631.1	PFAM: Phage integrase family
YP_005147632.1	PFAM: Helix-turn-helix
YP_005147633.1	PFAM: Helix-turn-helix
YP_005147634.1	TIGRFAM: DNA binding domain, excisionase family
YP_005147635.1	PFAM: N-terminal phage replisome organiser (Phage_rep_org_N); TIGRFAM: phage replisome organizer, putative, N-terminal region
YP_005147638.1	PFAM: IstB-like ATP binding protein
YP_005147639.1	PFAM: Phage integrase family
YP_005147641.1	PFAM: Phage capsid family
YP_005147645.1	PFAM: TatD related DNase
YP_005147646.1	TIGRFAM: DNA binding domain, excisionase family
YP_005147648.1	PFAM: Bacterial protein of unknown function (DUF881)
YP_005147649.1	PFAM: Bacterial protein of unknown function (DUF881)
YP_005147650.1	PFAM: Polysaccharide deacetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase
YP_005147651.1	PFAM: YabP family; TIGRFAM: sporulation protein YqfC
YP_005147652.1	PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD
YP_005147653.1	PFAM: PhoH-like protein
YP_005147654.1	PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG
YP_005147655.1	PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family
YP_005147656.1	PFAM: Prokaryotic diacylglycerol kinase
YP_005147657.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric
YP_005147658.1	PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_005147660.1	PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO
YP_005147661.1	PFAM: Phospholipase D Active site motif
YP_005147662.1	PFAM: Acyltransferase family
YP_005147663.1	PFAM: HD domain
YP_005147664.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005147665.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005147667.1	PFAM: Bacterial protein of unknown function (DUF896)
YP_005147668.1	PFAM: CheW-like domain
YP_005147670.1	PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_005147671.1	PFAM: TM2 domain
YP_005147673.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_005147674.1	PFAM: Aluminium resistance protein
YP_005147675.1	TIGRFAM: putative membrane fusion protein
YP_005147676.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_005147677.1	PFAM: Protein of unknown function (DUF552)
YP_005147678.1	PFAM: YGGT family
YP_005147679.1	PFAM: S4 domain
YP_005147680.1	PFAM: DivIVA protein; TIGRFAM: DivIVA domain
YP_005147681.1	PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_005147682.1	PFAM: Tetratricopeptide repeat
YP_005147683.1	PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ
YP_005147684.1	PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_005147685.1	PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG
YP_005147686.1	TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family
YP_005147687.1	PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family
YP_005147688.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005147689.1	PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_005147690.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_005147691.1	PFAM: Phosphoribosyl transferase domain
YP_005147692.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_005147693.1	PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type
YP_005147694.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2
YP_005147695.1	PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_005147696.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_005147697.1	PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_005147698.1	PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein
YP_005147699.1	PFAM: Phosphoglycerate mutase family
YP_005147701.1	PFAM: Domain of unknown function (DUF1287)
YP_005147702.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein
YP_005147705.1	TIGRFAM: spore photoproduct lyase
YP_005147706.1	PFAM: YibE/F-like protein
YP_005147707.1	PFAM: Protein of unknown function, DUF486
YP_005147708.1	PFAM: EAL domain; ABC transporter substrate binding protein; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005147709.1	PFAM: Protein of unknown function DUF134
YP_005147710.1	PFAM: ParA/MinD ATPase like; Dinitrogenase iron-molybdenum cofactor
YP_005147711.1	PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein
YP_005147712.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005147714.1	PFAM: Putative redox-active protein (C_GCAxxG_C_C)
YP_005147717.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2087); Bacterial regulatory proteins, luxR family
YP_005147718.1	PFAM: Domain of unknown function (DUF1905)
YP_005147719.1	PFAM: Metallo-beta-lactamase superfamily
YP_005147721.1	PFAM: Beta-eliminating lyase
YP_005147722.1	PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme
YP_005147725.1	PFAM: short chain dehydrogenase
YP_005147726.1	PFAM: short chain dehydrogenase
YP_005147728.1	PFAM: Phosphorylase superfamily
YP_005147729.1	PFAM: Trypsin; Copper amine oxidase N-terminal domain
YP_005147731.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005147732.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005147733.1	PFAM: Flavodoxin-like fold
YP_005147734.1	PFAM: Bacterial pre-peptidase C-terminal domain; Peptidase inhibitor I9; Subtilase family
YP_005147735.1	PFAM: Glycosyl hydrolases family 18; S-layer homology domain
YP_005147736.1	PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase
YP_005147737.1	PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase
YP_005147738.1	PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
YP_005147740.1	PFAM: Fibronectin type III domain
YP_005147741.1	PFAM: Dockerin type I repeat; O-Glycosyl hydrolase family 30
YP_005147744.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_005147747.1	PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005147748.1	PFAM: Beta-eliminating lyase
YP_005147749.1	PFAM: Amino acid permease
YP_005147750.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_005147751.1	PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor
YP_005147753.1	PFAM: Acetyltransferase (GNAT) family
YP_005147754.1	PFAM: DEAD_2
YP_005147755.1	PFAM: UvrD/REP helicase
YP_005147756.1	PFAM: Protein of unknown function; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
YP_005147757.1	PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_005147758.1	PFAM: Late competence development protein ComFB
YP_005147759.1	PFAM: SNARE associated Golgi protein
YP_005147760.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_005147761.1	PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit
YP_005147762.1	PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit
YP_005147763.1	PFAM: AMP-binding enzyme
YP_005147764.1	PFAM: ACT domain
YP_005147765.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain
YP_005147766.1	PFAM: Thioesterase domain
YP_005147767.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005147768.1	PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain
YP_005147769.1	PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_005147770.1	PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_005147771.1	PFAM: RecX family
YP_005147772.1	PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family
YP_005147773.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_005147774.1	PFAM: DeoR-like helix-turn-helix domain
YP_005147775.1	PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_005147776.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_005147777.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_005147778.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_005147779.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005147780.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_005147781.1	PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial
YP_005147782.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family
YP_005147783.1	PFAM: Stage V sporulation protein S (SpoVS)
YP_005147784.1	PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_005147785.1	PFAM: Coat F domain
YP_005147787.1	PFAM: Nitroreductase family
YP_005147788.1	PFAM: Aldo/keto reductase family
YP_005147789.1	PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type
YP_005147790.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_005147791.1	PFAM: Uncharacterised protein family (UPF0182)
YP_005147793.1	PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase)
YP_005147794.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2128)
YP_005147796.1	PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase
YP_005147797.1	PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein
YP_005147798.1	PFAM: Sulfatase
YP_005147799.1	PFAM: Fumble; TIGRFAM: pantothenate kinase, eukaryotic/staphyloccocal type
YP_005147800.1	PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family
YP_005147801.1	PFAM: Protein of unknown function DUF88
YP_005147802.1	PFAM: Putative helix-turn-helix protein, YlxM / p13 like
YP_005147803.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_005147804.1	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_005147805.1	PFAM: KH domain
YP_005147806.1	PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_005147807.1	PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_005147808.1	PFAM: Uncharacterized small protein (DUF2292)
YP_005147809.1	PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB
YP_005147810.1	PFAM: Dinitrogenase iron-molybdenum cofactor
YP_005147811.1	PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein
YP_005147812.1	PFAM: Nitrogenase component 1 type Oxidoreductase
YP_005147813.1	PFAM: Nitrogenase component 1 type Oxidoreductase
YP_005147814.1	PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_005147815.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_005147817.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_005147818.1	PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_005147819.1	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_005147820.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF
YP_005147821.1	PFAM: Ribonuclease HII
YP_005147823.1	PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein
YP_005147824.1	PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein
YP_005147825.1	PFAM: Membrane dipeptidase (Peptidase family M19)
YP_005147826.1	PFAM: Aminotransferase class I and II
YP_005147827.1	PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase
YP_005147828.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005147829.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005147830.1	PFAM: SNARE associated Golgi protein
YP_005147831.1	PFAM: Domain of Unknown Function (DUF1540)
YP_005147832.1	PFAM: Amino acid permease
YP_005147833.1	PFAM: Cellulose binding domain; Domain of unknown function; Cohesin domain
YP_005147834.1	PFAM: Glycosyl hydrolase family 48; Dockerin type I repeat
YP_005147835.1	PFAM: Glycosyl hydrolases family 8; Dockerin type I repeat
YP_005147836.1	PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat
YP_005147837.1	PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; Carbohydrate binding domain; N-terminal ig-like domain of cellulase
YP_005147838.1	PFAM: Cohesin domain
YP_005147839.1	PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat
YP_005147840.1	PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat
YP_005147841.1	PFAM: Dockerin type I repeat
YP_005147842.1	PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat
YP_005147843.1	PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat
YP_005147844.1	PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat
YP_005147845.1	PFAM: Domain of unknown function (DUF303); Dockerin type I repeat
YP_005147846.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005147848.1	PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD
YP_005147849.1	PFAM: Calcineurin-like phosphoesterase
YP_005147850.1	PFAM: Heavy-metal-associated domain
YP_005147851.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005147852.1	PFAM: NlpC/P60 family; Bacterial SH3 domain
YP_005147853.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family
YP_005147855.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005147856.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005147857.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005147858.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005147859.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005147860.1	PFAM: Putative lysophospholipase
YP_005147861.1	PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase
YP_005147862.1	PFAM: Dockerin type I repeat; Glycosyl hydrolases family 11
YP_005147863.1	PFAM: PPIC-type PPIASE domain
YP_005147864.1	PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26
YP_005147865.1	PFAM: Glycosyl hydrolase family 9
YP_005147866.1	PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; N-terminal ig-like domain of cellulase
YP_005147867.1	PFAM: Glycosyl hydrolase family 9; N-terminal ig-like domain of cellulase
YP_005147868.1	PFAM: Protein of unknown function (DUF1657)
YP_005147871.1	PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179)
YP_005147872.1	PFAM: Patatin-like phospholipase
YP_005147873.1	PFAM: Single-strand binding protein family
YP_005147874.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005147875.1	PFAM: ApbE family
YP_005147876.1	PFAM: Protein of unknown function (DUF1312)
YP_005147877.1	PFAM: Heptaprenyl diphosphate synthase component I
YP_005147878.1	PFAM: Polyprenyl synthetase
YP_005147879.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N'
YP_005147880.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_005147881.1	PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_005147882.1	PFAM: Protein of unknown function DUF116
YP_005147883.1	PFAM: Putative neutral zinc metallopeptidase
YP_005147884.1	PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; NOL1/NOP2/sun family putative RNA methylase; transcription antitermination factor NusB
YP_005147885.1	PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; manually curated
YP_005147886.1	PFAM: Protein phosphatase 2C
YP_005147887.1	PFAM: Protein kinase domain; PASTA domain
YP_005147888.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_005147889.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_005147890.1	PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase
YP_005147892.1	PFAM: Papain family cysteine protease
YP_005147902.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_005147903.1	PFAM: TfoX N-terminal domain
YP_005147904.1	PFAM: Protein of unknown function (DUF2992)
YP_005147906.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005147907.1	PFAM: Protein of unknown function (DUF1565)
YP_005147908.1	PFAM: Glycosyl hydrolases family 18; Dockerin type I repeat
YP_005147909.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_005147912.1	PFAM: Shikimate kinase
YP_005147913.1	PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26
YP_005147914.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005147915.1	PFAM: Protein of unknown function DUF134
YP_005147917.1	PFAM: Acyl transferase domain
YP_005147918.1	PFAM: AhpC/TSA family
YP_005147919.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_005147920.1	PFAM: PAP2 superfamily
YP_005147922.1	PFAM: ABC transporter
YP_005147923.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_005147925.1	PFAM: Predicted permease
YP_005147926.1	PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_005147927.1	PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain
YP_005147928.1	PFAM: Amidohydrolase
YP_005147929.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005147931.1	PFAM: Melibiase; Dockerin type I repeat
YP_005147932.1	PFAM: Dockerin type I repeat; Bacterial Ig-like domain (group 4); Glycosyl hydrolases family 43
YP_005147936.1	PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit
YP_005147937.1	PFAM: Dak1 domain
YP_005147938.1	PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_005147939.1	PFAM: short chain dehydrogenase
YP_005147940.1	PFAM: family
YP_005147941.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005147942.1	PFAM: ABC transporter
YP_005147943.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005147944.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005147945.1	PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family
YP_005147946.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005147947.1	PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain
YP_005147948.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain
YP_005147949.1	PFAM: Phosphoadenosine phosphosulfate reductase family
YP_005147950.1	PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin)
YP_005147951.1	PFAM: ROK family
YP_005147952.1	PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein
YP_005147953.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein
YP_005147954.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT
YP_005147955.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein
YP_005147956.1	PFAM: Carbohydrate binding domain; CotH protein
YP_005147957.1	PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat
YP_005147959.1	PFAM: Sulfite exporter TauE/SafE
YP_005147960.1	PFAM: Protein of unknown function (DUF1634)
YP_005147961.1	PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_005147962.1	PFAM: NlpC/P60 family
YP_005147964.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005147965.1	PFAM: Predicted periplasmic protein (DUF2233)
YP_005147967.1	PFAM: Bacterial SH3 domain
YP_005147968.1	PFAM: Bacterial Ig-like domain (group 2)
YP_005147969.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005147970.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_005147973.1	PFAM: Nitrogenase component 1 type Oxidoreductase
YP_005147974.1	PFAM: Nitrogenase component 1 type Oxidoreductase
YP_005147976.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005147977.1	PFAM: Protein of unknown function (DUF2935)
YP_005147978.1	PFAM: Bacterial transcription activator, effector binding domain
YP_005147979.1	PFAM: Major Facilitator Superfamily
YP_005147980.1	PFAM: Desulfoferrodoxin; Helix-turn-helix
YP_005147982.1	PFAM: Chloramphenicol phosphotransferase-like protein
YP_005147983.1	PFAM: ABC transporter
YP_005147984.1	PFAM: Major Facilitator Superfamily; TIGRFAM: H+ Antiporter protein
YP_005147985.1	PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain
YP_005147986.1	PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat
YP_005147987.1	PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; N-terminal ig-like domain of cellulase
YP_005147988.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005147989.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005147990.1	PFAM: Serine hydroxymethyltransferase
YP_005147991.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain
YP_005147992.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2225)
YP_005147993.1	PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI
YP_005147994.1	PFAM: Aminotransferase class-V
YP_005147996.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; 4Fe-4S binding domain
YP_005147997.1	PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit
YP_005147998.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_005148000.1	PFAM: NADH dehydrogenase
YP_005148001.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
YP_005148002.1	PFAM: LysM domain
YP_005148003.1	PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA
YP_005148004.1	PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq
YP_005148005.1	PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase
YP_005148006.1	PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL
YP_005148007.1	PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS
YP_005148008.1	PFAM: Protein of unknown function (DUF964)
YP_005148009.1	PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family
YP_005148010.1	PFAM: Acetyltransferase (GNAT) family
YP_005148011.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD
YP_005148013.1	PFAM: Clp protease
YP_005148014.1	PFAM: Flavoprotein; TIGRFAM: dipicolinic acid synthetase, B subunit
YP_005148015.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit
YP_005148016.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005148017.1	PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase
YP_005148018.1	PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_005148019.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005148020.1	PFAM: Protein of unknown function DUF58
YP_005148021.1	PFAM: Transglutaminase-like superfamily
YP_005148022.1	PFAM: EamA-like transporter family
YP_005148025.1	PFAM: Alanine racemase, C-terminal domain; Acyltransferase family; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_005148026.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005148027.1	PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_005148028.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148029.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148030.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148031.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148032.1	PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein
YP_005148033.1	PFAM: Predicted membrane protein (DUF2318)
YP_005148034.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_005148035.1	PFAM: Copper amine oxidase N-terminal domain
YP_005148036.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_005148037.1	PFAM: Protein of unknown function (DUF2752)
YP_005148038.1	PFAM: Carbon-nitrogen hydrolase
YP_005148039.1	PFAM: Uncharacterized ACR (DUF711)
YP_005148040.1	PFAM: ACT domain
YP_005148041.1	TIGRFAM: putative DNA modification/repair radical SAM protein
YP_005148042.1	TIGRFAM: probable DNA metabolism protein
YP_005148043.1	PFAM: Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_005148044.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_005148045.1	PFAM: S1 RNA binding domain; LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); ribosomal protein S1
YP_005148046.1	PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_005148047.1	PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1
YP_005148048.1	PFAM: HutP
YP_005148050.1	PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family
YP_005148051.1	PFAM: SIS domain; Helix-turn-helix domain, rpiR family
YP_005148053.1	PFAM: HMGL-like; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit
YP_005148054.1	PFAM: Biotin-requiring enzyme
YP_005148055.1	PFAM: Carboxyl transferase domain
YP_005148056.1	PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family
YP_005148058.1	PFAM: Putative rRNA methylase
YP_005148060.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_005148061.1	PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ
YP_005148062.1	PFAM: Protein of unknown function (DUF2953)
YP_005148063.1	PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B
YP_005148064.1	PFAM: ScpA/B protein
YP_005148065.1	PFAM: Peptidase family M50
YP_005148066.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_005148067.1	PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase
YP_005148068.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD
YP_005148069.1	PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M
YP_005148070.1	PFAM: NUDIX domain
YP_005148071.1	PFAM: RNase H
YP_005148072.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_005148073.1	PFAM: AMP-binding enzyme
YP_005148074.1	PFAM: L-lactate permease
YP_005148076.1	PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain
YP_005148077.1	PFAM: M42 glutamyl aminopeptidase
YP_005148078.1	PFAM: M42 glutamyl aminopeptidase
YP_005148079.1	PFAM: M42 glutamyl aminopeptidase
YP_005148080.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005148081.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005148082.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148083.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148084.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005148085.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005148086.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005148087.1	PFAM: Protein of unknown function (DUF795)
YP_005148088.1	PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein
YP_005148089.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1
YP_005148090.1	PFAM: UvrD/REP helicase; TIGRFAM: helicase-exonuclease AddAB, AddA subunit, Firmicutes type
YP_005148091.1	PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: helicase-exonuclease AddAB, AddB subunit
YP_005148092.1	PFAM: CAAX amino terminal protease family
YP_005148093.1	PFAM: CoA binding domain
YP_005148094.1	PFAM: Flavin containing amine oxidoreductase
YP_005148095.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_005148096.1	PFAM: CBS domain
YP_005148097.1	PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain
YP_005148099.1	PFAM: Bacillus/Clostridium GerA spore germination protein
YP_005148100.1	PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family
YP_005148102.1	PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease)
YP_005148103.1	PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain
YP_005148104.1	PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_005148105.1	PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase
YP_005148106.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_005148107.1	PFAM: Domain of unknown function (DUF2520); Rossmann-like domain
YP_005148108.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_005148109.1	PFAM: Transcriptional regulator PadR-like family; Virulence activator alpha C-term
YP_005148110.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type
YP_005148111.1	PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_005148112.1	PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_005148113.1	PFAM: Domain of unknown function (DUF370)
YP_005148114.1	PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein
YP_005148115.1	PFAM: Response regulator receiver domain
YP_005148116.1	PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_005148117.1	PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase
YP_005148118.1	PFAM: DnaJ domain; DnaJ C terminal region; DnaJ central domain (4 repeats); TIGRFAM: chaperone protein DnaJ
YP_005148119.1	PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_005148120.1	PFAM: GrpE
YP_005148121.1	PFAM: Domain of unknown function; HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA
YP_005148123.1	PFAM: Aminotransferase class IV
YP_005148124.1	PFAM: HD domain
YP_005148125.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_005148127.1	PFAM: Orthopoxvirus protein of unknown function (DUF830)
YP_005148128.1	PFAM: Cobalt transport protein
YP_005148129.1	PFAM: ABC transporter
YP_005148130.1	PFAM: ABC transporter
YP_005148132.1	PFAM: Sulfatase
YP_005148133.1	PFAM: HD domain
YP_005148134.1	PFAM: Chagasin family peptidase inhibitor I42
YP_005148135.1	PFAM: Chagasin family peptidase inhibitor I42
YP_005148136.1	PFAM: Glycosyl transferase family 2
YP_005148137.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_005148138.1	PFAM: Glycosyl transferase family 2; Galactosyltransferase
YP_005148139.1	PFAM: Aminotransferase class-III
YP_005148140.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005148141.1	PFAM: Glycosyl transferase family 2
YP_005148142.1	PFAM: Polysaccharide biosynthesis protein
YP_005148143.1	PFAM: UbiA prenyltransferase family
YP_005148144.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005148151.1	PFAM: Ribbon-helix-helix protein, copG family
YP_005148154.1	TIGRFAM: DNA binding domain, excisionase family
YP_005148155.1	PFAM: BRCA1 C Terminus (BRCT) domain
YP_005148160.1	PFAM: Proteasome subunit
YP_005148161.1	PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005148166.1	TIGRFAM: DNA binding domain, excisionase family
YP_005148167.1	PFAM: Helix-turn-helix
YP_005148168.1	PFAM: Helix-turn-helix
YP_005148169.1	PFAM: Phage integrase family
YP_005148170.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005148171.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger
YP_005148173.1	PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_005148174.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase
YP_005148176.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_005148177.1	PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
YP_005148178.1	PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2
YP_005148179.1	PFAM: Rhomboid family
YP_005148180.1	PFAM: Homocysteine S-methyltransferase
YP_005148181.1	PFAM: AMP-binding enzyme
YP_005148182.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005148183.1	PFAM: Histidine kinase; Sensor protein DegS; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148184.1	PFAM: Formylglycine-generating sulfatase enzyme
YP_005148185.1	PFAM: Glycosyl hydrolases family 11
YP_005148186.1	PFAM: GIY-YIG catalytic domain
YP_005148187.1	PFAM: Putative cyclase
YP_005148189.1	PFAM: Rubrerythrin
YP_005148190.1	PFAM: Thioesterase superfamily
YP_005148192.1	PFAM: Sir2 family
YP_005148193.1	PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_005148196.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein
YP_005148197.1	PFAM: Aminotransferase class I and II
YP_005148198.1	PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II
YP_005148200.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II
YP_005148201.1	PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ
YP_005148203.1	PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_005148204.1	PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_005148205.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG
YP_005148206.1	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_005148208.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005148209.1	PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA
YP_005148210.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_005148211.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type
YP_005148212.1	PFAM: HD domain
YP_005148213.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_005148214.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148215.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148216.1	PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A
YP_005148217.1	PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B
YP_005148218.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_005148219.1	PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor
YP_005148220.1	PFAM: ATP-NAD kinase
YP_005148221.1	PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein
YP_005148222.1	PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_005148223.1	PFAM: Domain of unknown function DUF21
YP_005148224.1	PFAM: Polyprenyl synthetase
YP_005148225.1	PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_005148226.1	PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_005148227.1	PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_005148228.1	PFAM: Small integral membrane protein (DUF2273)
YP_005148229.1	PFAM: Protein of unknown function (DUF322)
YP_005148230.1	PFAM: Protein of unknown function (DUF322)
YP_005148232.1	TIGRFAM: stage III sporulation protein AG
YP_005148233.1	PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF
YP_005148234.1	PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE
YP_005148235.1	PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD
YP_005148236.1	PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC
YP_005148237.1	PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB
YP_005148238.1	TIGRFAM: stage III sporulation protein AA
YP_005148239.1	PFAM: ABC transporter
YP_005148240.1	PFAM: Bacterial regulatory proteins, gntR family
YP_005148243.1	PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_005148244.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005148245.1	PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II
YP_005148246.1	PFAM: Xylose isomerase-like TIM barrel
YP_005148247.1	PFAM: Aminopeptidase I zinc metalloprotease (M18)
YP_005148248.1	PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family
YP_005148251.1	PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_005148252.1	PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type
YP_005148253.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS
YP_005148254.1	PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein
YP_005148255.1	PFAM: Uncharacterised protein family (UPF0180)
YP_005148257.1	PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus
YP_005148258.1	PFAM: Copper amine oxidase N-terminal domain
YP_005148259.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_005148260.1	PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase
YP_005148261.1	PFAM: Nucleotidyl transferase; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005148262.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_005148263.1	PFAM: Copper amine oxidase N-terminal domain; Protein of unknown function (DUF3298)
YP_005148265.1	PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P
YP_005148267.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148268.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148269.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative
YP_005148270.1	PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_005148271.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_005148272.1	PFAM: Radical SAM superfamily; TIGRFAM: coproporphyrinogen dehydrogenase HemZ
YP_005148273.1	PFAM: Metallo-beta-lactamase superfamily
YP_005148274.1	PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_005148275.1	PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_005148276.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_005148277.1	PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 43
YP_005148278.1	PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_005148279.1	PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_005148280.1	PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2
YP_005148281.1	PFAM: NlpC/P60 family; Bacterial SH3 domain
YP_005148282.1	PFAM: Acetyltransferase (GNAT) family
YP_005148284.1	PFAM: MarR family
YP_005148285.1	PFAM: Protein of unknown function (DUF3533); TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats; YhgE/Pip C-terminal domain; YhgE/Pip N-terminal domain
YP_005148287.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase
YP_005148288.1	PFAM: AsnC family
YP_005148289.1	PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA)
YP_005148290.1	PFAM: Aminotransferase class I and II
YP_005148291.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase
YP_005148292.1	PFAM: Domain of unknown function (DUF362)
YP_005148294.1	PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family
YP_005148295.1	PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease)
YP_005148296.1	PFAM: Bacillus/Clostridium GerA spore germination protein
YP_005148298.1	PFAM: Glycosyl hydrolases family 43
YP_005148299.1	PFAM: Dockerin type I repeat; GDSL-like Lipase/Acylhydrolase
YP_005148300.1	PFAM: Domain of unknown function (DUF303); Dockerin type I repeat
YP_005148302.1	PFAM: Protein of unknown function (DUF2798)
YP_005148304.1	PFAM: Protein of unknown function, DUF624
YP_005148305.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase
YP_005148306.1	PFAM: Acetyltransferase (GNAT) family
YP_005148307.1	PFAM: Patatin-like phospholipase
YP_005148309.1	PFAM: KWG Leptospira
YP_005148310.1	PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent
YP_005148312.1	PFAM: Germination protease; TIGRFAM: GPR endopeptidase
YP_005148313.1	PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_005148314.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase
YP_005148315.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005148316.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148317.1	PFAM: Histidine kinase; Cache domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148318.1	PFAM: family
YP_005148319.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005148320.1	PFAM: ABC transporter
YP_005148321.1	PFAM: family
YP_005148322.1	PFAM: Glycosyl transferase family 2
YP_005148323.1	PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_005148324.1	PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase
YP_005148325.1	PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_005148326.1	PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_005148328.1	PFAM: Ferric uptake regulator family
YP_005148330.1	PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB
YP_005148331.1	PFAM: FeoA domain
YP_005148333.1	PFAM: Protein of unknown function (DUF1667)
YP_005148334.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005148335.1	PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase
YP_005148336.1	PFAM: Bacterial Ig-like domain (group 2)
YP_005148337.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148339.1	PFAM: CorA-like Mg2+ transporter protein
YP_005148340.1	PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_005148341.1	PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_005148342.1	PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_005148343.1	PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD
YP_005148344.1	PFAM: S-layer homology domain; Fibronectin type III domain; TIGRFAM: cyanobacterial long protein repeat
YP_005148345.1	PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family
YP_005148347.1	PFAM: Uncharacterised ACR, COG2135
YP_005148348.1	PFAM: Peptidase family S41
YP_005148352.1	PFAM: Dockerin type I repeat; GDSL-like Lipase/Acylhydrolase
YP_005148353.1	PFAM: Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
YP_005148355.1	PFAM: YceG-like family
YP_005148356.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005148358.1	PFAM: Protein of unknown function (DUF342)
YP_005148359.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family
YP_005148361.1	PFAM: CheD
YP_005148362.1	PFAM: CheC-like family
YP_005148363.1	PFAM: CheW-like domain
YP_005148364.1	PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_005148365.1	PFAM: CheB methylesterase; Response regulator receiver domain
YP_005148366.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005148367.1	PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF
YP_005148368.1	PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA
YP_005148369.1	PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB
YP_005148370.1	PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR
YP_005148371.1	PFAM: Bacterial export proteins, family 3; TIGRFAM: type III secretion protein, HrpO family; flagellar biosynthetic protein FliQ
YP_005148372.1	PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP
YP_005148373.1	PFAM: Flagellar biosynthesis protein, FliO
YP_005148374.1	PFAM: Response regulator receiver domain
YP_005148375.1	PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN
YP_005148376.1	PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM
YP_005148377.1	PFAM: Flagellar basal body-associated protein FliL
YP_005148378.1	PFAM: Flagellar protein (FlbD)
YP_005148379.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins
YP_005148380.1	PFAM: Protein of unknown function (DUF3766); TIGRFAM: flagellar operon protein
YP_005148381.1	PFAM: Flagellar hook capping protein
YP_005148382.1	PFAM: Flagellar hook-length control protein FliK
YP_005148384.1	PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ
YP_005148385.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI
YP_005148386.1	PFAM: Flagellar assembly protein FliH
YP_005148387.1	PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG
YP_005148388.1	PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
YP_005148389.1	PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE
YP_005148390.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC
YP_005148391.1	PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB
YP_005148392.1	PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase
YP_005148393.1	PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_005148394.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005148399.1	PFAM: Bacteriophage holin
YP_005148414.1	PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain
YP_005148415.1	PFAM: Phage integrase family
YP_005148419.1	PFAM: BRO family, N-terminal domain
YP_005148421.1	PFAM: Type III restriction enzyme, res subunit
YP_005148428.1	PFAM: Phage integrase family
YP_005148429.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_005148430.1	PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein
YP_005148431.1	PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR
YP_005148432.1	PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family
YP_005148433.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
YP_005148434.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-E factor
YP_005148435.1	PFAM: Sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA
YP_005148436.1	PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_005148437.1	PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA
YP_005148438.1	PFAM: Protein of unknown function (DUF1290)
YP_005148439.1	PFAM: POTRA domain, FtsQ-type
YP_005148440.1	PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain
YP_005148441.1	PFAM: CobB/CobQ-like glutamine amidotransferase domain
YP_005148442.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005148444.1	PFAM: Transglycosylase SLT domain
YP_005148445.1	PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_005148446.1	PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I
YP_005148448.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005148449.1	PFAM: Response regulator receiver domain
YP_005148450.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_005148452.1	PFAM: Coat F domain
YP_005148454.1	PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family
YP_005148455.1	PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_005148456.1	PFAM: TrkA-N domain; TrkA-C domain
YP_005148457.1	PFAM: TrkA-N domain
YP_005148458.1	PFAM: Protein of unknown function (DUF421)
YP_005148460.1	PFAM: Sodium/calcium exchanger protein
YP_005148461.1	PFAM: Transposase DDE domain; Transposase domain (DUF772)
YP_005148462.1	PFAM: Major Facilitator Superfamily
YP_005148463.1	PFAM: Uncharacterised protein family (UPF0259)
YP_005148464.1	PFAM: short chain dehydrogenase
YP_005148465.1	PFAM: DJ-1/PfpI family; Uncharacterised protein family (UPF0153)
YP_005148466.1	PFAM: CYTH domain
YP_005148467.1	PFAM: Yqey-like protein
YP_005148468.1	PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21
YP_005148469.1	PFAM: HIT domain
YP_005148470.1	PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase
YP_005148471.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic
YP_005148472.1	PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_005148473.1	PFAM: CheW-like domain; manually curated
YP_005148474.1	TIGRFAM: putative bacteriocin precursor, CLI_3235 family
YP_005148476.1	TIGRFAM: peptide maturation system protein, TIGR04066 family
YP_005148477.1	PFAM: Radical SAM superfamily; TIGRFAM: CLI_3235-class bacteriocin maturation radical SAM enzyme; radical SAM additional 4Fe4S-binding domain
YP_005148478.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005148479.1	TIGRFAM: phosphate binding protein
YP_005148480.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_005148481.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_005148482.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA
YP_005148483.1	PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_005148484.1	PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_005148485.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148486.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold
YP_005148487.1	PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family
YP_005148488.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148489.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148490.1	PFAM: Bacterial extracellular solute-binding protein
YP_005148491.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148492.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148493.1	PFAM: Bacterial extracellular solute-binding protein
YP_005148494.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)
YP_005148495.1	PFAM: Phosphate transporter family
YP_005148496.1	PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein
YP_005148497.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_005148498.1	PFAM: Thiamine transporter protein (Thia_YuaJ); TIGRFAM: putative proton-coupled thiamine transporter YuaJ
YP_005148499.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005148500.1	PFAM: Dockerin type I repeat; Glycosyl hydrolase family 53
YP_005148504.1	PFAM: Accessory gene regulator B
YP_005148505.1	PFAM: Stage IV sporulation protein A (spore_IV_A); TIGRFAM: stage IV sporulation protein A
YP_005148506.1	PFAM: NlpC/P60 family; Bacterial SH3 domain
YP_005148507.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_005148508.1	PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase
YP_005148509.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_005148510.1	PFAM: Protein of unknown function (DUF512); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase
YP_005148511.1	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_005148512.1	PFAM: Uncharacterized ACR, COG1399
YP_005148513.1	PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_005148514.1	PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase
YP_005148515.1	PFAM: Spermine/spermidine synthase
YP_005148516.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_005148517.1	PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase
YP_005148519.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005148520.1	PFAM: Fascin domain
YP_005148521.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148522.1	PFAM: Response regulator receiver domain; Helix-turn-helix
YP_005148526.1	PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_005148528.1	PFAM: Putative peptidoglycan binding domain; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_005148530.1	PFAM: RHS Repeat; Subtilase family; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_005148531.1	PFAM: Kelch motif; Fibronectin type III domain
YP_005148532.1	PFAM: Resolvase, N terminal domain
YP_005148533.1	PFAM: alpha/beta hydrolase fold
YP_005148536.1	PFAM: ABC transporter
YP_005148537.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005148538.1	PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat
YP_005148540.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_005148543.1	PFAM: Amidohydrolase family
YP_005148544.1	PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase
YP_005148545.1	PFAM: Carbohydrate binding domain (family 25)
YP_005148547.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_005148548.1	PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase
YP_005148549.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005148551.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005148552.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type
YP_005148553.1	PFAM: HMGL-like
YP_005148554.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005148555.1	PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_005148556.1	PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_005148557.1	PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_005148558.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_005148559.1	PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_005148560.1	PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_005148561.1	PFAM: Membrane transport protein
YP_005148563.1	PFAM: ABC transporter
YP_005148564.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein
YP_005148565.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_005148566.1	PFAM: HMGL-like
YP_005148568.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005148569.1	PFAM: Radical SAM superfamily; Nitrogenase component 1 type Oxidoreductase; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB
YP_005148570.1	PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE
YP_005148571.1	PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain
YP_005148572.1	PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain
YP_005148573.1	PFAM: Nitrogen regulatory protein P-II
YP_005148574.1	PFAM: Nitrogen regulatory protein P-II
YP_005148575.1	PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein
YP_005148576.1	PFAM: Iron only nitrogenase protein AnfO (AnfO_nitrog); TIGRFAM: Fe-only nitrogenase accessory protein AnfO
YP_005148578.1	PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_005148579.1	PFAM: Pseudomonas avirulence D protein (AvrD)
YP_005148581.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005148582.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148583.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005148584.1	PFAM: Nucleoside H+ symporter
YP_005148585.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005148586.1	PFAM: NlpC/P60 family; Putative peptidoglycan binding domain
YP_005148587.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005148588.1	PFAM: family
YP_005148589.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005148590.1	PFAM: ABC transporter
YP_005148591.1	PFAM: ROK family; HTH domain
YP_005148593.1	PFAM: Exonuclease
YP_005148594.1	PFAM: Transcriptional regulator PadR-like family
YP_005148595.1	PFAM: LD-carboxypeptidase
YP_005148597.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005148598.1	PFAM: Acetyltransferase (GNAT) family
YP_005148600.1	PFAM: Acyl transferase domain; Condensation domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; Thioesterase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; TIGRFAM: amino acid adenylation domain
YP_005148601.1	PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: amino acid adenylation domain
YP_005148602.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_005148603.1	PFAM: Phosphopantetheine attachment site; manually curated
YP_005148605.1	PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_005148606.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family
YP_005148607.1	PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein
YP_005148608.1	PFAM: AIR carboxylase
YP_005148609.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated
YP_005148610.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005148611.1	PFAM: Aminotransferase class I and II
YP_005148612.1	PFAM: AsnC family
YP_005148613.1	PFAM: DivIVA protein
YP_005148614.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_005148616.1	PFAM: Predicted periplasmic protein (DUF2233)
YP_005148617.1	PFAM: Protein of unknown function (DUF1113)
YP_005148618.1	PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases
YP_005148619.1	PFAM: Sporulation and spore germination
YP_005148620.1	PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative
YP_005148622.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; CoA enzyme activase uncharacterised domain (DUF2229)
YP_005148623.1	PFAM: N-acetylmuramoyl-L-alanine amidase; Uncharacterised BCR, COG1649
YP_005148625.1	PFAM: Transcriptional regulator PadR-like family; Virulence activator alpha C-term
YP_005148626.1	PFAM: Transposase DDE domain; Transposase domain (DUF772)
YP_005148627.1	PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist
YP_005148628.1	PFAM: Phosphofructokinase
YP_005148629.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148630.1	PFAM: NfeD-like
YP_005148631.1	PFAM: SigmaW regulon antibacterial
YP_005148633.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_005148634.1	PFAM: HD domain; Acetyltransferase (GNAT) family
YP_005148635.1	PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1
YP_005148636.1	PFAM: Flavin reductase like domain
YP_005148637.1	PFAM: Glycosyl hydrolase family 9; N-terminal ig-like domain of cellulase
YP_005148638.1	PFAM: isoform II
YP_005148639.1	PFAM: Aldo/keto reductase family
YP_005148642.1	PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only
YP_005148643.1	PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_005148644.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005148645.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148646.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit
YP_005148647.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005148648.1	PFAM: Protein of unknown function (DUF1292)
YP_005148649.1	PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF
YP_005148650.1	PFAM: Bacterial protein of unknown function (DUF965)
YP_005148651.1	PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family
YP_005148652.1	PFAM: Pectate lyase
YP_005148653.1	PFAM: Glycosyl transferase family 2
YP_005148654.1	PFAM: PTS HPr component phosphorylation site
YP_005148655.1	PFAM: Protein of unknown function (DUF523)
YP_005148656.1	PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases
YP_005148658.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148659.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148660.1	PFAM: Polysaccharide deacetylase
YP_005148661.1	PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_005148662.1	PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_005148663.1	PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_005148664.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148665.1	PFAM: Helix-turn-helix
YP_005148668.1	PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
YP_005148669.1	PFAM: Triosephosphate isomerase; Phosphoglycerate kinase; TIGRFAM: triosephosphate isomerase
YP_005148670.1	PFAM: Pentapeptide repeats (8 copies)
YP_005148673.1	PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family
YP_005148677.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148678.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_005148679.1	PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain
YP_005148680.1	PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase
YP_005148681.1	PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 2
YP_005148682.1	PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain
YP_005148684.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_005148685.1	PFAM: Uncharacterized conserved protein (DUF2156)
YP_005148686.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T-like protein
YP_005148687.1	PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2
YP_005148688.1	PFAM: CheC-like family
YP_005148689.1	PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE
YP_005148690.1	PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD
YP_005148691.1	PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC
YP_005148693.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma-F factor
YP_005148694.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor
YP_005148695.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist
YP_005148696.1	PFAM: Sporulation Regulator WhiA N terminal; Sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein
YP_005148697.1	PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative
YP_005148698.1	PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related
YP_005148699.1	PFAM: P-loop ATPase protein family
YP_005148700.1	PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_005148701.1	PFAM: PHP domain
YP_005148702.1	PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase
YP_005148703.1	PFAM: Inorganic H+ pyrophosphatase
YP_005148704.1	PFAM: Protein of unknown function (DUF554)
YP_005148705.1	PFAM: HD domain; Poly A polymerase head domain
YP_005148708.1	PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family
YP_005148709.1	PFAM: Putative transposase DNA-binding domain
YP_005148710.1	PFAM: Stage II sporulation protein E (SpoIIE)
YP_005148711.1	PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster; PAS fold; TIGRFAM: PAS domain S-box
YP_005148712.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005148714.1	PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only
YP_005148715.1	PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_005148716.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005148717.1	PFAM: Aldo/keto reductase family
YP_005148718.1	PFAM: Protein of unknown function DUF45
YP_005148719.1	PFAM: Protein of unknown function (DUF1113)
YP_005148720.1	PFAM: ArsC family
YP_005148721.1	PFAM: CheB methylesterase; Response regulator receiver domain
YP_005148722.1	PFAM: Domain of Unknown Function (DUF1540)
YP_005148723.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_005148724.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005148725.1	PFAM: CheW-like domain
YP_005148726.1	PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_005148727.1	PFAM: Response regulator receiver domain
YP_005148729.1	PFAM: PilZ domain
YP_005148730.1	PFAM: 5TMR of 5TMR-LYT; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005148731.1	PFAM: Glycosyl hydrolase family 10; S-layer homology domain; Carbohydrate binding domain; Domain of unknown function (DUF1083)
YP_005148732.1	PFAM: Glycosyl hydrolase family 10; S-layer homology domain; Carbohydrate binding domain; Domain of unknown function (DUF1083)
YP_005148733.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148735.1	PFAM: ABC transporter
YP_005148736.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148737.1	PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family
YP_005148738.1	PFAM: Phosphopantetheine attachment site
YP_005148739.1	PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family
YP_005148740.1	PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family
YP_005148741.1	PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_005148742.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_005148743.1	PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; NLI interacting factor-like phosphatase; TIGRFAM: FkbH-like domain; amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; HAD-superfamily phosphatase, subfamily IIIC
YP_005148744.1	PFAM: Phosphopantetheine attachment site; Acyl transferase domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005148745.1	PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: amino acid adenylation domain
YP_005148747.1	PFAM: ABC transporter; TIGRFAM: cyclic peptide transporter
YP_005148748.1	PFAM: Copper amine oxidase N-terminal domain
YP_005148749.1	PFAM: Copper amine oxidase N-terminal domain
YP_005148751.1	PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat
YP_005148755.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; manually curated; non-canonical start codon
YP_005148756.1	PFAM: Beta-lactamase
YP_005148757.1	PFAM: FMN-dependent dehydrogenase
YP_005148758.1	PFAM: Protein of unknown function (DUF990)
YP_005148759.1	PFAM: Protein of unknown function (DUF990)
YP_005148760.1	PFAM: ABC transporter
YP_005148761.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005148762.1	PFAM: NUDIX domain; Radical SAM superfamily
YP_005148763.1	PFAM: Radical SAM superfamily
YP_005148764.1	PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family
YP_005148765.1	PFAM: Predicted permease
YP_005148766.1	PFAM: ABC transporter
YP_005148767.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005148768.1	PFAM: Bacterial Ig-like domain (group 2)
YP_005148769.1	PFAM: HMGL-like
YP_005148770.1	PFAM: ABC-2 type transporter
YP_005148771.1	PFAM: ABC transporter
YP_005148772.1	PFAM: short chain dehydrogenase
YP_005148774.1	PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148775.1	PFAM: Methyltransferase domain
YP_005148777.1	PFAM: Predicted nucleotidyltransferase
YP_005148778.1	PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148779.1	PFAM: Glycosyl hydrolases family 31
YP_005148780.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148781.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148782.1	PFAM: Bacterial extracellular solute-binding protein
YP_005148784.1	PFAM: ROK family; MarR family
YP_005148785.1	PFAM: EamA-like transporter family
YP_005148786.1	PFAM: Transaldolase
YP_005148787.1	PFAM: L-fucose isomerase, C-terminal domain
YP_005148788.1	PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family
YP_005148789.1	PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_005148790.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005148791.1	PFAM: Transketolase, thiamine diphosphate binding domain
YP_005148792.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005148793.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005148794.1	PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148795.1	PFAM: RF-1 domain; TIGRFAM: putative peptide chain release factor H
YP_005148797.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148798.1	PFAM: Bacterial Ig-like domain (group 2); S-layer homology domain
YP_005148799.1	PFAM: BNR/Asp-box repeat; Dockerin type I repeat
YP_005148803.1	PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_005148806.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase
YP_005148807.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005148808.1	PFAM: YbbR-like protein
YP_005148809.1	PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein
YP_005148811.1	PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase
YP_005148812.1	PFAM: Aminotransferase class-V
YP_005148813.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase
YP_005148816.1	PFAM: Domain of unknown function DUF20
YP_005148818.1	PFAM: PRC-barrel domain
YP_005148819.1	PFAM: Protein of unknown function (DUF1015)
YP_005148820.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005148821.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005148822.1	PFAM: MarR family
YP_005148823.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase
YP_005148825.1	PFAM: Glycosyl hydrolases family 11
YP_005148826.1	PFAM: Tetratricopeptide repeat
YP_005148827.1	PFAM: Predicted RNA-binding protein
YP_005148829.1	PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit
YP_005148830.1	PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ
YP_005148831.1	PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; manually curated
YP_005148833.1	PFAM: ABC transporter
YP_005148834.1	PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I
YP_005148836.1	PFAM: ABC transporter
YP_005148837.1	PFAM: Protein of unknown function (DUF2812)
YP_005148838.1	PFAM: Transcriptional regulator PadR-like family
YP_005148839.1	PFAM: Integrase core domain
YP_005148840.1	PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain
YP_005148841.1	PFAM: short chain dehydrogenase
YP_005148842.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005148843.1	PFAM: EamA-like transporter family
YP_005148845.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148846.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148847.1	PFAM: SNARE associated Golgi protein
YP_005148848.1	PFAM: Rubrerythrin
YP_005148849.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_005148852.1	PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
YP_005148853.1	PFAM: ABC transporter
YP_005148856.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148857.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148858.1	PFAM: Periplasmic solute binding protein family
YP_005148859.1	PFAM: pfkB family carbohydrate kinase
YP_005148860.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005148861.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005148862.1	PFAM: Predicted permease
YP_005148863.1	PFAM: ABC transporter
YP_005148864.1	PFAM: Glycosyl hydrolases family 8
YP_005148865.1	PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); manually curated; non-canonical start codon
YP_005148866.1	PFAM: Helix-turn-helix
YP_005148867.1	PFAM: Methyltransferase domain
YP_005148868.1	PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase
YP_005148869.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_005148870.1	PFAM: Transposase
YP_005148871.1	PFAM: Integrase core domain
YP_005148872.1	PFAM: Copper amine oxidase N-terminal domain
YP_005148874.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; SirA-like protein; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: CoA-disulfide reductase
YP_005148875.1	PFAM: Bacterial regulatory protein, arsR family
YP_005148877.1	PFAM: UDP-glucoronosyl and UDP-glucosyl transferase
YP_005148878.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_005148879.1	PFAM: Glycosyl transferase family 2
YP_005148880.1	PFAM: Flavodoxin-like fold
YP_005148881.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005148882.1	PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain
YP_005148883.1	PFAM: ABC-2 type transporter
YP_005148884.1	PFAM: ABC transporter
YP_005148885.1	PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_005148886.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005148887.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_005148888.1	PFAM: Acyl transferase domain
YP_005148889.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_005148890.1	PFAM: Flavodoxin-like fold
YP_005148891.1	PFAM: Radical SAM superfamily
YP_005148893.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_005148894.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_005148895.1	PFAM: Aldo/keto reductase family
YP_005148896.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148897.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005148899.1	PFAM: Bacterial extracellular solute-binding protein
YP_005148900.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148901.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148902.1	PFAM: Bacterial extracellular solute-binding protein
YP_005148903.1	PFAM: MBOAT family
YP_005148905.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase
YP_005148906.1	PFAM: Saccharopine dehydrogenase
YP_005148907.1	PFAM: Spo0E like sporulation regulatory protein
YP_005148908.1	PFAM: Copper amine oxidase N-terminal domain
YP_005148909.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005148910.1	PFAM: Protein of unknown function (DUF421)
YP_005148912.1	PFAM: Protein of unknown function (DUF421)
YP_005148914.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic
YP_005148915.1	PFAM: Bacterial protein of unknown function (DUF894)
YP_005148916.1	PFAM: Major Facilitator Superfamily
YP_005148917.1	PFAM: Bacterial protein of unknown function (DUF894)
YP_005148918.1	PFAM: Major Facilitator Superfamily
YP_005148919.1	PFAM: ApbE family
YP_005148921.1	PFAM: Heptaprenyl diphosphate synthase component I
YP_005148922.1	PFAM: Protein of unknown function (DUF1312)
YP_005148923.1	PFAM: UbiA prenyltransferase family
YP_005148924.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005148925.1	PFAM: Glycosyl hydrolases family 18; LysM domain
YP_005148926.1	PFAM: Metallo-beta-lactamase superfamily
YP_005148927.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005148928.1	PFAM: Manganese containing catalase
YP_005148931.1	PFAM: Bacterial transcription activator, effector binding domain
YP_005148932.1	PFAM: Protein of unknown function (DUF1646)
YP_005148933.1	PFAM: Domain of unknown function (DUF1858); TIGRFAM: hydrid cluster protein-associated redox disulfide domain
YP_005148934.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005148935.1	PFAM: Bacterial regulatory protein, arsR family
YP_005148936.1	PFAM: Phage Tail Collar Domain
YP_005148937.1	PFAM: Phage Tail Collar Domain
YP_005148938.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005148939.1	PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS
YP_005148940.1	PFAM: ThiF family; TIGRFAM: thiamine biosynthesis protein ThiF, family 2
YP_005148941.1	PFAM: Thiazole biosynthesis protein ThiG
YP_005148942.1	PFAM: Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH
YP_005148943.1	PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_005148945.1	PFAM: Transcriptional regulator PadR-like family
YP_005148947.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_005148948.1	PFAM: Dockerin type I repeat; CotH protein
YP_005148949.1	PFAM: Bacterial transcription activator, effector binding domain
YP_005148951.1	PFAM: Metallo-beta-lactamase superfamily
YP_005148952.1	PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat
YP_005148953.1	PFAM: tRNA synthetases class I (M); Anticodon-binding domain; Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase
YP_005148954.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; Kelch motif; Fibronectin type III domain
YP_005148956.1	PFAM: Protein of unknown function (DUF2793)
YP_005148957.1	PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I
YP_005148960.1	PFAM: FecCD transport family
YP_005148961.1	PFAM: ABC transporter
YP_005148962.1	PFAM: Periplasmic binding protein
YP_005148963.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_005148964.1	PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_005148965.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005148966.1	PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family
YP_005148967.1	PFAM: Phosphorylase superfamily
YP_005148968.1	PFAM: pfkB family carbohydrate kinase
YP_005148969.1	PFAM: Isochorismatase family
YP_005148970.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005148971.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005148972.1	PFAM: ABC transporter
YP_005148973.1	PFAM: Basic membrane protein
YP_005148974.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005148975.1	PFAM: LysM domain
YP_005148976.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005148977.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005148978.1	PFAM: ABC transporter
YP_005148979.1	PFAM: Basic membrane protein
YP_005148980.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_005148981.1	PFAM: MgtC family
YP_005148982.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_005148983.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase
YP_005148984.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005148985.1	PFAM: Xylose isomerase-like TIM barrel
YP_005148986.1	PFAM: Xylose isomerase-like TIM barrel
YP_005148987.1	PFAM: Bacterial extracellular solute-binding protein
YP_005148988.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148989.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005148990.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005148991.1	PFAM: Glucose inhibited division protein A
YP_005148992.1	PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005148993.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005148994.1	TIGRFAM: small redox-active disulfide protein 2
YP_005148995.1	PFAM: Predicted permease
YP_005148996.1	PFAM: Bacterial regulatory protein, arsR family
YP_005148998.1	PFAM: Radical SAM superfamily
YP_005148999.1	PFAM: NADPH-dependent FMN reductase
YP_005149001.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005149003.1	PFAM: Methyltransferase small domain
YP_005149005.1	PFAM: Radical SAM superfamily
YP_005149006.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005149010.1	PFAM: ABC transporter
YP_005149011.1	PFAM: Protein of unknown function (DUF1648)
YP_005149012.1	PFAM: Subtilase family
YP_005149015.1	PFAM: Helix-turn-helix
YP_005149016.1	PFAM: Helix-turn-helix
YP_005149019.1	PFAM: Accessory gene regulator B
YP_005149020.1	PFAM: Acetyltransferase (GNAT) family
YP_005149021.1	PFAM: Dockerin type I repeat
YP_005149022.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005149023.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_005149024.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: N-acetylneuraminate lyase
YP_005149025.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149026.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149027.1	PFAM: Bacterial extracellular solute-binding protein
YP_005149028.1	PFAM: Putative N-acetylmannosamine-6-phosphate epimerase
YP_005149029.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005149030.1	PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family
YP_005149031.1	PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase)
YP_005149032.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase
YP_005149033.1	PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase
YP_005149034.1	PFAM: pfkB family carbohydrate kinase
YP_005149035.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005149036.1	PFAM: Xylose isomerase-like TIM barrel
YP_005149037.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149038.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149039.1	PFAM: Bacterial extracellular solute-binding protein
YP_005149040.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005149041.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005149042.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Predicted histidine kinase sensor domain
YP_005149043.1	PFAM: FAD binding domain
YP_005149044.1	PFAM: Glucose inhibited division protein A
YP_005149047.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005149048.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005149049.1	PFAM: Ferredoxin-dependent bilin reductase
YP_005149050.1	PFAM: Nucleotidyl transferase
YP_005149052.1	PFAM: ABC transporter
YP_005149054.1	PFAM: Polysaccharide pyruvyl transferase
YP_005149055.1	PFAM: Radical SAM superfamily
YP_005149056.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain
YP_005149061.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005149063.1	PFAM: Radical SAM superfamily
YP_005149064.1	PFAM: Radical SAM superfamily
YP_005149065.1	PFAM: Radical SAM superfamily
YP_005149066.1	PFAM: Radical SAM superfamily
YP_005149067.1	PFAM: Radical SAM superfamily
YP_005149068.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain
YP_005149070.1	PFAM: Nitroreductase family
YP_005149073.1	PFAM: Dihydrouridine synthase (Dus)
YP_005149074.1	PFAM: Protein of unknown function (DUF901); Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: small GTP-binding protein domain
YP_005149079.1	PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain
YP_005149080.1	PFAM: Major Facilitator Superfamily
YP_005149081.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005149082.1	PFAM: Bacterial capsule synthesis protein PGA_cap
YP_005149083.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005149084.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149085.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149086.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005149087.1	PFAM: alpha/beta hydrolase fold
YP_005149088.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005149089.1	PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6)
YP_005149090.1	PFAM: Protein of unknown function DUF124; TIGRFAM: TIGR00266 family protein
YP_005149091.1	PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase
YP_005149092.1	PFAM: Bacterial regulatory proteins, gntR family
YP_005149093.1	PFAM: ABC transporter
YP_005149096.1	PFAM: ABC transporter
YP_005149097.1	PFAM: Bacterial regulatory proteins, gntR family
YP_005149099.1	PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase
YP_005149100.1	PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase
YP_005149101.1	PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor
YP_005149102.1	PFAM: Glycosyl hydrolases family 43
YP_005149103.1	PFAM: Transglutaminase-like superfamily; Bacterial Ig-like domain (group 4)
YP_005149106.1	PFAM: VTC domain
YP_005149107.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005149108.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005149109.1	PFAM: Methyltransferase domain
YP_005149110.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; family
YP_005149111.1	PFAM: Acyltransferase family
YP_005149112.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_005149113.1	PFAM: short chain dehydrogenase
YP_005149115.1	PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_005149116.1	PFAM: AMP-binding enzyme
YP_005149117.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005149118.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005149120.1	PFAM: S-layer homology domain
YP_005149121.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005149122.1	PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase
YP_005149123.1	TIGRFAM: probable extracellular repeat, HAF family
YP_005149124.1	PFAM: Rubrerythrin
YP_005149125.1	PFAM: Copper amine oxidase N-terminal domain
YP_005149126.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_005149127.1	PFAM: Protein of unknown function (DUF445)
YP_005149128.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB
YP_005149129.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005149130.1	PFAM: AMP-binding enzyme
YP_005149131.1	PFAM: Domain of unknown function (DU1801)
YP_005149132.1	PFAM: RibD C-terminal domain
YP_005149133.1	PFAM: Protein of unknown function (DUF3237)
YP_005149134.1	PFAM: alpha/beta hydrolase fold
YP_005149135.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family
YP_005149136.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005149137.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005149138.1	PFAM: Rubrerythrin
YP_005149139.1	PFAM: Bacterial extracellular solute-binding protein
YP_005149140.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149141.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149142.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit
YP_005149143.1	PFAM: Cupin domain; Helix-turn-helix
YP_005149144.1	PFAM: ABC transporter
YP_005149145.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005149146.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005149147.1	PFAM: Peptidase family M23
YP_005149148.1	PFAM: Polysaccharide deacetylase
YP_005149150.1	PFAM: ABC transporter
YP_005149151.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149152.1	PFAM: NMT1/THI5 like
YP_005149153.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_005149154.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149155.1	PFAM: ABC transporter; NIL domain
YP_005149156.1	PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein
YP_005149157.1	PFAM: NAD synthase; TIGRFAM: TIGR00268 family protein
YP_005149158.1	PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid
YP_005149159.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; 3-amino-5-hydroxybenoic acid synthesis related protein; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005149160.1	PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase)
YP_005149161.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005149162.1	PFAM: AMP-binding enzyme
YP_005149163.1	PFAM: Peptidase family U32
YP_005149166.1	PFAM: Domain of unknown function (DUF362)
YP_005149167.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005149168.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005149169.1	PFAM: Carbamoyltransferase
YP_005149170.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005149172.1	PFAM: Peptidase family U32
YP_005149173.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005149174.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005149175.1	PFAM: ABC transporter
YP_005149176.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_005149177.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_005149178.1	PFAM: Radical SAM superfamily
YP_005149179.1	PFAM: Protein of unknown function (DUF990)
YP_005149180.1	PFAM: Protein of unknown function (DUF990)
YP_005149181.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005149182.1	PFAM: GlcNAc-PI de-N-acetylase
YP_005149183.1	PFAM: Glycosyl transferase family 2
YP_005149184.1	PFAM: Transcription termination factor nusG; manually curated
YP_005149185.1	PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_005149189.1	PFAM: Glycosyl hydrolases family 43
YP_005149190.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005149191.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Subtilase family
YP_005149192.1	PFAM: ABC transporter
YP_005149197.1	PFAM: Lanthionine synthetase C-like protein; TIGRFAM: type 2 lantibiotic biosynthesis protein LanM
YP_005149198.1	PFAM: NADPH-dependent FMN reductase
YP_005149200.1	PFAM: pfkB family carbohydrate kinase
YP_005149201.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005149202.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005149203.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_005149204.1	PFAM: Thi4 family
YP_005149205.1	PFAM: Thi4 family
YP_005149206.1	PFAM: Thi4 family
YP_005149207.1	PFAM: Bacterial extracellular solute-binding protein
YP_005149208.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149209.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149210.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005149211.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005149212.1	PFAM: Thi4 family
YP_005149213.1	PFAM: FAD binding domain
YP_005149214.1	PFAM: Xylose isomerase-like TIM barrel
YP_005149217.1	PFAM: Restriction endonuclease
YP_005149218.1	PFAM: Transcriptional regulator PadR-like family
YP_005149219.1	PFAM: Predicted permease
YP_005149220.1	PFAM: ABC transporter
YP_005149221.1	PFAM: Bacterial regulatory protein, arsR family
YP_005149222.1	PFAM: Radical SAM superfamily
YP_005149223.1	PFAM: Male sterility protein; Phosphopantetheine attachment site; Nonribosomal peptide synthase; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; thioester reductase domain
YP_005149224.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005149225.1	PFAM: AMP-binding enzyme
YP_005149226.1	PFAM: Thioesterase domain; manually curated
YP_005149227.1	PFAM: Protein of unknown function (DUF1706)
YP_005149228.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005149230.1	PFAM: ABC transporter
YP_005149231.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005149232.1	PFAM: Dockerin type I repeat; Glycosyl hydrolase family 10
YP_005149233.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_005149234.1	PFAM: SIS domain; contains amidotransferase and phosphosugar isomerase domains
YP_005149235.1	PFAM: GlcNAc-PI de-N-acetylase
YP_005149236.1	PFAM: Bacterial Ig-like domain (group 2)
YP_005149237.1	PFAM: S-layer homology domain
YP_005149238.1	PFAM: SIS domain; Thermophilic metalloprotease (M29)
YP_005149239.1	PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats)
YP_005149241.1	PFAM: Bacterial protein of unknown function (DUF871)
YP_005149242.1	PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain
YP_005149243.1	PFAM: BadF/BadG/BcrA/BcrD ATPase family
YP_005149244.1	PFAM: RDD family
YP_005149245.1	PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component
YP_005149246.1	PFAM: PTS system, Lactose/Cellobiose specific IIB subunit
YP_005149247.1	PFAM: PTS system, Lactose/Cellobiose specific IIA subunit
YP_005149248.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_005149249.1	PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_005149250.1	PFAM: HTH domain; Mga helix-turn-helix domain; PRD domain
YP_005149251.1	PFAM: S1 RNA binding domain
YP_005149253.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold
YP_005149254.1	PFAM: Nucleoside H+ symporter; TIGRFAM: oligosaccharide:H+ symporter
YP_005149255.1	PFAM: Glycosyl transferase family 2
YP_005149256.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005149257.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase
YP_005149258.1	PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_005149259.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_005149260.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_005149261.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2200)
YP_005149262.1	PFAM: Uncharacterised ACR, YkgG family COG1556
YP_005149265.1	PFAM: BNR/Asp-box repeat
YP_005149266.1	PFAM: Carbohydrate binding module (family 6); Polysaccharide deacetylase; Glycosyl hydrolases family 11
YP_005149267.1	PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 11
YP_005149268.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain
YP_005149271.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain
YP_005149276.1	PFAM: Bacillus haemolytic enterotoxin (HBL)
YP_005149278.1	PFAM: Peptidase family S58
YP_005149279.1	PFAM: MerR family regulatory protein
YP_005149282.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005149283.1	PFAM: Histidine kinase; 7TM diverse intracellular signalling; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005149284.1	PFAM: S-layer homology domain
YP_005149287.1	PFAM: Trypsin
YP_005149288.1	PFAM: alpha/beta hydrolase fold
YP_005149289.1	PFAM: NUDIX domain
YP_005149290.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005149291.1	PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases
YP_005149292.1	PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases
YP_005149293.1	PFAM: Phosphoribosyl transferase domain
YP_005149294.1	PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein
YP_005149295.1	PFAM: Radical SAM superfamily
YP_005149296.1	PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein
YP_005149297.1	PFAM: Protein of unknown function, DUF606
YP_005149298.1	PFAM: Domain of unknown function (DUF1083); Putative esterase
YP_005149299.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_005149300.1	PFAM: Glycosyl hydrolase family 10; S-layer homology domain
YP_005149301.1	TIGRFAM: peptide maturation system acyl carrier-related protein
YP_005149302.1	TIGRFAM: peptide maturation system protein, TIGR04066 family
YP_005149303.1	PFAM: Radical SAM superfamily; TIGRFAM: CLI_3235-class bacteriocin maturation radical SAM enzyme; radical SAM additional 4Fe4S-binding domain
YP_005149304.1	TIGRFAM: putative bacteriocin precursor, CLI_3235 family
YP_005149307.1	PFAM: Helix-turn-helix
YP_005149311.1	PFAM: ABC transporter
YP_005149322.1	PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_005149323.1	PFAM: Domain of unknown function (DUF955)
YP_005149324.1	PFAM: Restriction endonuclease
YP_005149325.1	PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit
YP_005149326.1	PFAM: Type I restriction modification DNA specificity domain
YP_005149332.1	PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr
YP_005149334.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005149335.1	PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm)
YP_005149336.1	PFAM: HNH endonuclease
YP_005149337.1	PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm)
YP_005149339.1	PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA
YP_005149340.1	PFAM: Arsenical resistance operon trans-acting repressor ArsD
YP_005149341.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein
YP_005149342.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005149343.1	PFAM: Bacterial regulatory protein, arsR family
YP_005149344.1	PFAM: Acetyltransferase (GNAT) family
YP_005149345.1	PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein
YP_005149346.1	PFAM: Methyltransferase domain
YP_005149347.1	PFAM: MarR family
YP_005149348.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005149350.1	PFAM: Recombinase
YP_005149351.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005149353.1	PFAM: Resolvase, N terminal domain
YP_005149354.1	PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005149355.1	PFAM: Helix-turn-helix
YP_005149356.1	PFAM: Domain of unknown function (DUF955)
YP_005149357.1	PFAM: Spo0E like sporulation regulatory protein
YP_005149358.1	PFAM: Helix-turn-helix
YP_005149359.1	PFAM: HTH domain
YP_005149360.1	PFAM: TraG/TraD family
YP_005149362.1	PFAM: Sel1 repeat
YP_005149363.1	PFAM: Sel1 repeat
YP_005149370.1	PFAM: AIG2-like family
YP_005149371.1	PFAM: Putative amidoligase enzyme
YP_005149374.1	PFAM: C-5 cytosine-specific DNA methylase
YP_005149385.1	PFAM: Type II/IV secretion system protein
YP_005149386.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005149387.1	PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB
YP_005149388.1	PFAM: Type IV leader peptidase family
YP_005149390.1	PFAM: SpoVG
YP_005149392.1	PFAM: S-layer homology domain
YP_005149396.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam)
YP_005149398.1	PFAM: Antirestriction protein (ArdA)
YP_005149399.1	PFAM: Topoisomerase DNA binding C4 zinc finger
YP_005149401.1	PFAM: Helix-turn-helix
YP_005149404.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2326)
YP_005149407.1	PFAM: Helix-turn-helix
YP_005149410.1	PFAM: Protein of unknown function (DUF1444)
YP_005149411.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005149413.1	PFAM: Recombinase
YP_005149414.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005149416.1	PFAM: Resolvase, N terminal domain
YP_005149418.1	PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005149419.1	PFAM: ZIP Zinc transporter
YP_005149420.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_005149421.1	PFAM: Heavy-metal-associated domain
YP_005149422.1	PFAM: Bacterial regulatory protein, arsR family
YP_005149423.1	PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA
YP_005149424.1	PFAM: Arsenical resistance operon trans-acting repressor ArsD
YP_005149425.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein
YP_005149426.1	PFAM: Bacterial regulatory protein, arsR family
YP_005149427.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005149428.1	PFAM: Bacterial regulatory protein, arsR family
YP_005149429.1	PFAM: Acetyltransferase (GNAT) family
YP_005149430.1	PFAM: Methyltransferase domain
YP_005149431.1	PFAM: MarR family
YP_005149432.1	PFAM: HTH domain
YP_005149433.1	PFAM: TraG/TraD family
YP_005149435.1	PFAM: Sel1 repeat
YP_005149438.1	manually curated
YP_005149442.1	PFAM: NlpC/P60 family
YP_005149443.1	PFAM: AIG2-like family
YP_005149444.1	PFAM: Putative amidoligase enzyme
YP_005149446.1	PFAM: Domain of unknown function DUF87
YP_005149449.1	PFAM: C-5 cytosine-specific DNA methylase
YP_005149450.1	manually curated
YP_005149452.1	PFAM: Domain of unknown function (DUF1814)
YP_005149456.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005149465.1	PFAM: Type II/IV secretion system protein
YP_005149466.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005149467.1	PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB
YP_005149468.1	PFAM: Type IV leader peptidase family
YP_005149470.1	PFAM: SpoVG
YP_005149472.1	PFAM: S-layer homology domain
YP_005149476.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_005149481.1	PFAM: BFD-like [2Fe-2S] binding domain
YP_005149482.1	PFAM: Bacterial regulatory protein, arsR family
YP_005149484.1	PFAM: Hsp20/alpha crystallin family
YP_005149485.1	PFAM: Protein of unknown function (DUF1113)
YP_005149488.1	PFAM: Helix-turn-helix
YP_005149490.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005149492.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005149494.1	PFAM: DNA polymerase family A
YP_005149495.1	PFAM: Protein of unknown function (DUF2815)
YP_005149496.1	PFAM: Protein of unknown function (DUF2800)
YP_005149499.1	PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain
YP_005149501.1	PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin
YP_005149505.1	PFAM: Phage tail protein
YP_005149507.1	manually curated
YP_005149509.1	TIGRFAM: phage major tail protein, phi13 family
YP_005149511.1	PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family
YP_005149512.1	PFAM: Phage head-tail joining protein
YP_005149513.1	PFAM: Phage QLRG family, putative DNA packaging; TIGRFAM: uncharacterized phage protein (possible DNA packaging)
YP_005149514.1	PFAM: Head fiber protein
YP_005149515.1	PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family
YP_005149516.1	PFAM: Clp protease
YP_005149517.1	PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family
YP_005149519.1	PFAM: Phage Terminase
YP_005149521.1	PFAM: AIG2-like family
YP_005149522.1	PFAM: Putative amidoligase enzyme
YP_005149525.1	PFAM: C-5 cytosine-specific DNA methylase
YP_005149526.1	PFAM: DNA methylase; ParB-like nuclease domain
YP_005149527.1	PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase
YP_005149528.1	PFAM: Phage terminase, small subunit
YP_005149529.1	PFAM: HNH endonuclease
YP_005149530.1	PFAM: Protein of unknown function (DUF1492)
YP_005149532.1	PFAM: VRR-NUC domain
YP_005149533.1	PFAM: Virulence-associated protein E
YP_005149537.1	PFAM: Phage regulatory protein Rha (Phage_pRha); TIGRFAM: phage regulatory protein, rha family
YP_005149539.1	PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type I restriction and modification enzyme - subunit R C terminal; Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family
YP_005149540.1	PFAM: Type I restriction modification DNA specificity domain
YP_005149541.1	PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM)
YP_005149542.1	PFAM: Helix-turn-helix
YP_005149543.1	PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_005149544.1	PFAM: Rubrerythrin
YP_005149545.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug)
YP_005149547.1	PFAM: Sporulation protein YtfJ (Spore_YtfJ)
YP_005149548.1	PFAM: Membrane protein of unknown function
YP_005149549.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005149550.1	PFAM: Peptidase family M23
YP_005149551.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family
YP_005149552.1	PFAM: Amino acid kinase family; TIGRFAM: glutamate 5-kinase
YP_005149553.1	PFAM: PAP2 superfamily
YP_005149555.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_005149556.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005149557.1	PFAM: Prephenate dehydrogenase; ACT domain
YP_005149558.1	PFAM: CoA binding domain; Putative DNA-binding protein N-terminus
YP_005149559.1	PFAM: Glycosyl transferases group 1; Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB
YP_005149560.1	PFAM: ABC transporter
YP_005149561.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_005149562.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005149563.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_005149564.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005149565.1	PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD
YP_005149568.1	PFAM: Glycosyl hydrolases family 18; Leucine Rich Repeat
YP_005149569.1	PFAM: Protein of unknown function (DUF964)
YP_005149575.1	PFAM: Hemerythrin HHE cation binding domain
YP_005149576.1	PFAM: Protein of unknown function (DUF2812)
YP_005149577.1	PFAM: Transcriptional regulator PadR-like family
YP_005149579.1	PFAM: ABC transporter
YP_005149581.1	PFAM: Protein of unknown function (DUF990)
YP_005149582.1	PFAM: Protein of unknown function (DUF990)
YP_005149583.1	PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain
YP_005149584.1	PFAM: Radical SAM superfamily
YP_005149585.1	PFAM: Phosphopantetheine attachment site
YP_005149587.1	PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase
YP_005149588.1	PFAM: Hsp33 protein
YP_005149589.1	PFAM: 'Cold-shock' DNA-binding domain
YP_005149590.1	PFAM: Methyltransferase domain; manually curated
YP_005149591.1	PFAM: Small, acid-soluble spore proteins, alpha/beta type
YP_005149592.1	PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_005149593.1	PFAM: Peptidase family M23
YP_005149594.1	PFAM: Predicted permease
YP_005149595.1	PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE
YP_005149597.1	PFAM: Major Facilitator Superfamily
YP_005149598.1	PFAM: Bacterial transcription activator, effector binding domain
YP_005149599.1	PFAM: Protein of unknown function (DUF2589)
YP_005149600.1	PFAM: Protein of unknown function (DUF2589)
YP_005149602.1	PFAM: ABC transporter; TOBE domain
YP_005149603.1	PFAM: Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_005149604.1	PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_005149605.1	PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases
YP_005149606.1	PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_005149607.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_005149608.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_005149609.1	PFAM: Acetyltransferase (GNAT) family
YP_005149611.1	PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit
YP_005149612.1	PFAM: Cupin domain
YP_005149613.1	PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179)
YP_005149614.1	PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
YP_005149617.1	PFAM: PemK-like protein
YP_005149618.1	PFAM: Ribbon-helix-helix protein, copG family
YP_005149619.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_005149620.1	PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region
YP_005149622.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_005149623.1	PFAM: Glycosyl transferases group 1
YP_005149626.1	PFAM: O-Antigen ligase
YP_005149628.1	PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain
YP_005149629.1	PFAM: Hsp20/alpha crystallin family
YP_005149630.1	PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B
YP_005149631.1	PFAM: NlpC/P60 family
YP_005149632.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_005149633.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family
YP_005149634.1	PFAM: Methyltransferase domain
YP_005149636.1	PFAM: Bacterial Ig-like domain (group 2)
YP_005149641.1	PFAM: Resolvase, N terminal domain
YP_005149642.1	PFAM: Phage portal protein, SPP1 Gp6-like
YP_005149643.1	PFAM: Terminase-like family
YP_005149649.1	PFAM: Helix-turn-helix
YP_005149650.1	PFAM: Helix-turn-helix
YP_005149654.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_005149655.1	PFAM: Protein of unknown function (DUF2837)
YP_005149658.1	PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E
YP_005149659.1	PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase
YP_005149660.1	PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179)
YP_005149665.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_005149667.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_005149668.1	PFAM: Protein of unknown function (DUF503)
YP_005149669.1	PFAM: Uncharacterised ACR, YkgG family COG1556
YP_005149670.1	PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671
YP_005149671.1	PFAM: Carbohydrate binding module 27; Glycosyl hydrolase family 26
YP_005149672.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149673.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149674.1	PFAM: Bacterial extracellular solute-binding protein
YP_005149675.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005149676.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005149677.1	PFAM: Domain of unknown function (DUF377)
YP_005149678.1	PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
YP_005149679.1	PFAM: Domain of unknown function (DUF377)
YP_005149680.1	PFAM: Acetyl xylan esterase (AXE1)
YP_005149681.1	PFAM: Domain of unknown function (DUF1980); TIGRFAM: TIGR03943 family protein
YP_005149682.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; Predicted permease
YP_005149683.1	PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain
YP_005149684.1	PFAM: Ferric uptake regulator family
YP_005149685.1	PFAM: Acetyltransferase (GNAT) family
YP_005149686.1	PFAM: CarD-like/TRCF domain
YP_005149688.1	PFAM: Carbon-nitrogen hydrolase
YP_005149689.1	PFAM: Condensation domain
YP_005149690.1	PFAM: AMP-binding enzyme
YP_005149691.1	PFAM: FMN-binding domain
YP_005149692.1	PFAM: ApbE family
YP_005149693.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005149695.1	PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease)
YP_005149697.1	PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family
YP_005149698.1	PFAM: Bacillus/Clostridium GerA spore germination protein
YP_005149699.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_005149703.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005149706.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2313)
YP_005149707.1	PFAM: Baseplate J-like protein
YP_005149708.1	PFAM: Protein of unknown function (DUF2634)
YP_005149709.1	PFAM: Protein of unknown function (DUF2577)
YP_005149710.1	PFAM: Phage late control gene D protein (GPD)
YP_005149711.1	PFAM: LysM domain
YP_005149712.1	TIGRFAM: tape measure domain
YP_005149713.1	PFAM: Phage XkdN-like protein
YP_005149714.1	PFAM: Protein of unknown function (DUF2001)
YP_005149715.1	PFAM: Phage tail sheath protein
YP_005149716.1	manually curated; non-canonical start codon
YP_005149718.1	PFAM: Helix-turn-helix
YP_005149719.1	PFAM: S1 RNA binding domain
YP_005149720.1	PFAM: Septum formation initiator
YP_005149721.1	PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ
YP_005149722.1	PFAM: YabP family; TIGRFAM: sporulation protein YabP
YP_005149723.1	PFAM: S4 domain
YP_005149724.1	PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit
YP_005149725.1	PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein
YP_005149726.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_005149727.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T
YP_005149728.1	PFAM: PPIC-type PPIASE domain
YP_005149729.1	PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_005149730.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_005149731.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_005149732.1	TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_005149733.1	PFAM: SpoVG
YP_005149734.1	PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type
YP_005149735.1	PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--alanine ligase; manually curated
YP_005149736.1	PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_005149737.1	PFAM: Predicted periplasmic protein (DUF2233)
YP_005149738.1	PFAM: Rod binding protein
YP_005149739.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria
YP_005149740.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins
YP_005149741.1	PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_005149742.1	PFAM: GTPase of unknown function; TIGRFAM: hydrogenase maturation GTPase HydF; small GTP-binding protein domain
YP_005149743.1	PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: iron-only hydrogenase maturation rSAM protein HydG; thiazole biosynthesis protein ThiH
YP_005149744.1	TIGRFAM: putative iron-only hydrogenase system regulator
YP_005149747.1	PFAM: Transposase DDE domain; Transposase domain (DUF772)
YP_005149748.1	PFAM: Sodium/hydrogen exchanger family
YP_005149749.1	PFAM: TrkA-C domain
YP_005149751.1	PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID
YP_005149753.1	PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family
YP_005149754.1	PFAM: Orthopoxvirus protein of unknown function (DUF830)
YP_005149755.1	PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase
YP_005149757.1	PFAM: Aminotransferase class I and II
YP_005149758.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_005149759.1	PFAM: DNA / pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenate--cysteine ligase, streptococcal
YP_005149760.1	PFAM: Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase, streptococcal; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_005149761.1	PFAM: Radical SAM superfamily; TIGRFAM: iron-only hydrogenase maturation rSAM protein HydE
YP_005149762.1	PFAM: Transposase
YP_005149763.1	PFAM: Integrase core domain
YP_005149764.1	PFAM: Protein of unknown function (DUF1696)
YP_005149765.1	PFAM: pfkB family carbohydrate kinase
YP_005149766.1	PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_005149767.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_005149768.1	manually curated; non-canonical start codon
YP_005149769.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005149770.1	PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase
YP_005149771.1	PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family
YP_005149772.1	PFAM: Protein of unknown function (DUF1638)
YP_005149773.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_005149774.1	PFAM: ABC transporter
YP_005149775.1	PFAM: FecCD transport family
YP_005149776.1	PFAM: Periplasmic binding protein
YP_005149777.1	PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase
YP_005149778.1	PFAM: Bacterial capsule synthesis protein PGA_cap
YP_005149779.1	PFAM: Sulfatase
YP_005149781.1	PFAM: Tetratricopeptide repeat
YP_005149782.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_005149783.1	PFAM: Domain of unknown function (DUF1836)
YP_005149784.1	PFAM: Domain of unknown function DUF; TIGRFAM: putative sporulation protein YtaF
YP_005149785.1	PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages
YP_005149786.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_005149787.1	PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_005149788.1	PFAM: Indole-3-glycerol phosphate synthase
YP_005149789.1	PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YP_005149790.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_005149791.1	PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_005149792.1	PFAM: Methyltransferase domain; Glycosyl transferases group 1
YP_005149793.1	PFAM: Collagen triple helix repeat (20 copies)
YP_005149794.1	PFAM: Glycosyl transferase family 2
YP_005149795.1	PFAM: Aldo/keto reductase family
YP_005149796.1	PFAM: Hexokinase
YP_005149798.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_005149799.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005149801.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005149802.1	PFAM: Region found in RelA / SpoT proteins
YP_005149804.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005149805.1	PFAM: Prolyl oligopeptidase family
YP_005149806.1	PFAM: Dockerin type I repeat
YP_005149807.1	PFAM: ABC transporter
YP_005149808.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_005149809.1	PFAM: BioY family
YP_005149811.1	PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
YP_005149812.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005149816.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor
YP_005149817.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_005149818.1	PFAM: RNase3 domain
YP_005149819.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_005149820.1	PFAM: NlpC/P60 family; Bacterial SH3 domain
YP_005149821.1	PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_005149822.1	PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase
YP_005149825.1	PFAM: Protein of unknown function (DUF3343)
YP_005149826.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; 8-oxoguanine DNA glycosylase, N-terminal domain; Helix-hairpin-helix motif; TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg)
YP_005149828.1	PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase
YP_005149829.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase
YP_005149831.1	PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease)
YP_005149832.1	manually curated
YP_005149833.1	PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family
YP_005149834.1	PFAM: Bacillus/Clostridium GerA spore germination protein
YP_005149835.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005149836.1	PFAM: MerR, DNA binding; MerR family regulatory protein
YP_005149838.1	PFAM: Response regulator receiver domain
YP_005149839.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box
YP_005149840.1	PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA
YP_005149841.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005149842.1	PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit
YP_005149843.1	PFAM: Osmosensitive K+ channel His kinase sensor domain; Universal stress protein family
YP_005149844.1	PFAM: Protein of unknown function (DUF322)
YP_005149845.1	PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC
YP_005149847.1	PFAM: Domain of unknown function (DUF378)
YP_005149848.1	PFAM: Small, acid-soluble spore proteins, alpha/beta type
YP_005149849.1	PFAM: Domain of unknown function DUF20
YP_005149853.1	PFAM: PAP2 superfamily
YP_005149855.1	PFAM: Bacterial extracellular solute-binding protein
YP_005149856.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005149857.1	PFAM: Family of unknown function (DUF438); Hemerythrin HHE cation binding domain
YP_005149858.1	PFAM: Domain of unknown function (DUF1858)
YP_005149860.1	PFAM: Bacterial protein of unknown function (DUF951)
YP_005149861.1	PFAM: Mechanosensitive ion channel
YP_005149862.1	PFAM: Peptidase C26
YP_005149863.1	PFAM: Rubredoxin
YP_005149866.1	PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC
YP_005149867.1	PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: PAS domain S-box
YP_005149868.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_005149869.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB
YP_005149870.1	PFAM: UPF0126 domain
YP_005149871.1	PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA
YP_005149873.1	PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase
YP_005149874.1	PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit
YP_005149875.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_005149876.1	PFAM: NADH dehydrogenase
YP_005149877.1	PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_005149878.1	PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI
YP_005149879.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_005149880.1	PFAM: Protein of unknown function (DUF1385)
YP_005149881.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_005149882.1	PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_005149883.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005149884.1	PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD)
YP_005149885.1	PFAM: Sulfatase
YP_005149886.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005149887.1	PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family
YP_005149888.1	PFAM: Amidinotransferase; TIGRFAM: arginine deiminase
YP_005149889.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_005149890.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005149891.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005149892.1	PFAM: ABC-2 type transporter
YP_005149893.1	PFAM: ABC transporter
YP_005149894.1	PFAM: MerR family regulatory protein
YP_005149895.1	PFAM: CAAX amino terminal protease family
YP_005149896.1	PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH
YP_005149897.1	PFAM: Metallo-beta-lactamase superfamily
YP_005149898.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_005149899.1	PFAM: YycH protein
YP_005149902.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005149903.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005149906.1	PFAM: S-layer homology domain
YP_005149909.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit
YP_005149910.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase
YP_005149911.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_005149914.1	PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase
YP_005149915.1	PFAM: PP-loop family
YP_005149916.1	PFAM: Predicted periplasmic protein (DUF2233)
YP_005149917.1	PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase
YP_005149920.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_005149921.1	PFAM: GumN protein
YP_005149922.1	PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family
YP_005149923.1	PFAM: ABC 3 transport family
YP_005149924.1	PFAM: ABC transporter
YP_005149925.1	PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_005149927.1	PFAM: Helix-turn-helix
YP_005149930.1	PFAM: Protein of unknown function (DUF815)
YP_005149931.1	PFAM: Zinc carboxypeptidase
YP_005149933.1	PFAM: UvrD/REP helicase
YP_005149934.1	PFAM: Methyltransferase domain
YP_005149935.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005149936.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005149937.1	PFAM: ABC transporter; NIL domain
YP_005149938.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_005149939.1	PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_005149940.1	PFAM: domain; Transketolase, C-terminal domain
YP_005149941.1	TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family
YP_005149942.1	PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
YP_005149943.1	PFAM: Aminotransferase class I and II
YP_005149944.1	PFAM: AMP-binding enzyme
YP_005149945.1	PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain
YP_005149946.1	PFAM: Nitroreductase family
YP_005149947.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_005149948.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005149949.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase
YP_005149950.1	PFAM: ROK family
YP_005149951.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: gluconate kinase, FGGY type; D-xylulose kinase
YP_005149953.1	PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein
YP_005149954.1	PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type
YP_005149955.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_005149956.1	PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit
YP_005149957.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_005149958.1	PFAM: Glycosyl hydrolases family 43
YP_005149960.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_005149961.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase
YP_005149962.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005149963.1	PFAM: DivIVA protein
YP_005149964.1	PFAM: Phosphotransferase enzyme family
YP_005149967.1	PFAM: GDP-fucose protein O-fucosyltransferase
YP_005149968.1	PFAM: Subtilase family
YP_005149969.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005149970.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005149971.1	PFAM: Dehydrogenase E1 component
YP_005149973.1	PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_005149974.1	PFAM: EamA-like transporter family
YP_005149975.1	PFAM: Glycosyl transferase family 2
YP_005149976.1	PFAM: Uncharacterized conserved protein (DUF2304)
YP_005149977.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_005149978.1	PFAM: Accessory gene regulator B
YP_005149980.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005149981.1	PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; Bacterial SNF2 helicase associated; SWIM zinc finger
YP_005149982.1	PFAM: Thermophilic metalloprotease (M29)
YP_005149983.1	PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F
YP_005149985.1	PFAM: Major Facilitator Superfamily
YP_005149986.1	PFAM: Esterase PHB depolymerase
YP_005149987.1	PFAM: Bacterial Ig-like domain (group 2); Domain of unknown function (DUF1083)
YP_005149988.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005149990.1	PFAM: Uncharacterised protein family (UPF0180)
YP_005149991.1	PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase
YP_005149992.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_005149993.1	PFAM: L-fucose isomerase, C-terminal domain
YP_005149994.1	PFAM: Bacterial regulatory proteins, gntR family; family
YP_005149996.1	PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_005149997.1	PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein
YP_005149998.1	PFAM: Desulfoferrodoxin, N-terminal domain; Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain
YP_005149999.1	PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_005150001.1	PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family
YP_005150002.1	PFAM: Small, acid-soluble spore proteins, alpha/beta type
YP_005150003.1	PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_005150004.1	PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase
YP_005150005.1	PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_005150007.1	PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain
YP_005150008.1	PFAM: FeoA domain
YP_005150009.1	PFAM: FeoA domain
YP_005150010.1	PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_005150011.1	PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit
YP_005150012.1	PFAM: Helix-turn-helix; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_005150013.1	PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
YP_005150014.1	PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A
YP_005150015.1	PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain
YP_005150016.1	PFAM: R3H domain
YP_005150017.1	PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain
YP_005150018.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; manually curated
YP_005150019.1	PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_005150020.1	PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; IMG reference gene:2509526794_SP