-- dump date 20111121_011517 -- class Genbank::CDS -- table cds_note -- id note YP_001967645.1 oriT-binding protein YP_001967646.1 conjugal transfer protein YP_001967647.1 conjugal transfer protein YP_001967648.1 similar to Upf54.4 YP_001967649.1 similar to Upf54.8 YP_001967650.1 transcriptional regulation protein YP_001967651.1 regulation of gene expression YP_001967652.1 plasmid-partitioning protein YP_001967653.1 plasmid-partitioning protein YP_001967654.1 transcriptional repressor protein YP_001967655.1 plasmid stable inheritence protein YP_001967656.1 plasmid maintenance protein YP_001967657.1 plasmid maintenance protein YP_001967658.1 transcriptional repressor YP_001967659.1 possible anti-restriction system YP_001967660.1 similar to Reut_D6451 YP_001967661.1 possible anti-restriction system YP_001967662.1 DNA-damage-inducible protein YP_001967664.1 belongs to Tn21 family YP_001967666.1 transcriptional regulator PadR-like family member YP_001967667.1 chromate transport protein ChrA; involved in inorganic ion transport and metabolism YP_001967668.1 initiation of vegetative plasmid replication YP_001967669.1 single strand DNA binding protein YP_001967670.1 helix-turn-helix XRE-family like protein; DNA binding protein; TrbA repressor YP_001967671.1 ATPase autophosphorylase YP_001967672.1 mating pair formation protein YP_001967673.1 mating pair formation protein YP_001967674.1 mating pair formation protein; type IV secretion system ATPase VirB4 family YP_001967675.1 mating pair formation protein YP_001967676.1 mating pair formation protein; type IV secretion system VirB9/CagX family YP_001967677.1 mating pair formation protein YP_001967678.1 mating pair formation protein YP_001967679.1 mating pair formation protein YP_001967680.1 mating pair formation protein YP_001967681.1 entry exclusion protein YP_001967682.1 mating pair formation protein YP_001967683.1 mating pair formation protein YP_001967685.1 possible role in formation of pillus YP_001967686.1 probably mating pair formation; similar to Upf30.5 YP_001967687.1 similar to Upf31.7 YP_001967688.1 similar to transposase of IS1071 from Alcaligenes sp. strain BR60 YP_001967689.1 truncated; orf45 YP_001967690.1 identified experimentally YP_001967691.1 orf47 YP_001967692.1 identified experimentally YP_001967693.1 orfJ YP_001967694.1 4-oxalocrotonate decarboxylase YP_001967695.1 2-keto-4-pentenoate hydratase YP_001967696.1 identified experimentally YP_001967697.1 identified experimentally YP_001967698.1 identified experimentally YP_001967699.1 orf56 YP_001967700.1 orf57 YP_001967701.1 orf58 YP_001967702.1 orf59 YP_001967703.1 orf60 YP_001967704.1 orf61 YP_001967705.1 orf62 YP_001967706.1 transposase and inactivated derivatives, TnpA family (DNA replication, recombination, and repair); orf63 YP_001967707.1 PFAM: regulatory protein GntR, HTH; GntR-like; orf64 YP_001967708.1 orf65 YP_001967709.1 orf67 YP_001967710.1 tRNA-binding-domain-containing CsaA-like proteins; orf68 YP_001967711.1 nitroreductase-like family 4; related to nitroreductase; orf69 YP_001967712.1 accessory colonization factor AcfC; contains ABC-type periplasmic domain (based on general function prediction only); orf70 YP_001967713.1 orf71 YP_001967714.1 orf73 YP_001967715.1 orf74 YP_001967716.1 nitroreductase family YP_001967721.1 arsenate Reductase (ArsC) family, ArsC subfamily; similar to that encoded by arsC on the R733 plasmid of Escherichia coli; orf80 YP_001967722.1 arsenite transmembrane pump-like protein, anion permease ArsB; orf81 YP_001967723.1 low molecular weight phosphotyrosine protein phosphatase; orf82 YP_001967724.1 orf83 YP_001967725.1 orf84 YP_001967726.1 orf85 YP_001967728.1 transposase and inactivated derivatives, TnpA family; orf87 YP_001967729.1 DNA replication primase YP_001967732.1 putative plasmid transfer protein YP_001967733.1 conjugal transfer protein; type IV secretion system VirD4 family YP_003276043.1 COG0593, DnaA, ATPase involved in DNA replication initiation YP_003276044.1 COG0592, DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) YP_003276045.1 COG0187, GyrB, Type IIA topoisomerase (DNA gyrase/topo II YP_003276046.1 COG1846, MarR, Transcriptional regulators YP_003276047.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276048.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003276049.1 COG1878, Predicted metal-dependent hydrolase YP_003276050.1 COG4221, Short-chain alcohol dehydrogenase of unknownspecificity YP_003276051.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003276052.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276053.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003276054.1 COG5517, Small subunit of phenylpropionate dioxygenase YP_003276055.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003276056.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276057.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003276058.1 COG1014, PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases YP_003276059.1 COG4231, Indolepyruvate ferredoxin oxidoreductase YP_003276060.1 COG4242, CphB, Cyanophycinase and related exopeptidases YP_003276061.1 COG0625, Gst, Glutathione S-transferase YP_003276062.1 COG0727, Predicted Fe-S-cluster oxidoreductase YP_003276063.1 COG0642, BaeS, Signal transduction histidine kinase YP_003276064.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003276065.1 COG1538, TolC, Outer membrane protein YP_003276066.1 COG3696, Putative silver efflux pump YP_003276067.1 COG0845, AcrA, Membrane-fusion protein YP_003276068.1 COG1199, DinG, Rad3-related DNA helicases YP_003276069.1 COG5640, Secreted trypsin-like serine protease YP_003276071.1 COG2974, RdgC, DNA recombination-dependent growth factor C YP_003276072.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003276073.1 COG0789, SoxR, Predicted transcriptional regulators YP_003276074.1 COG2608, CopZ, Copper chaperone YP_003276075.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003276076.1 COG1902, NemA, NADH:flavin oxidoreductases YP_003276077.1 COG0625, Gst, Glutathione S-transferase YP_003276078.1 COG0431, Predicted flavoprotein YP_003276079.1 COG0445, GidA, NAD/FAD-utilizing enzyme apparently involved in celldivision YP_003276080.1 COG0357, GidB, Predicted S-adenosylmethionine-dependentmethyltransferase involved in bacterial cell division YP_003276081.1 COG1280, RhtB, Putative threonine efflux protein YP_003276082.1 COG1192, Soj, ATPases involved in chromosome partitioning YP_003276083.1 COG3545, Predicted esterase of the alpha/beta hydrolasefold YP_003276084.1 COG1475, SpoJ, Predicted transcriptional regulators YP_003276085.1 COG0235, AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_003276086.1 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelatedesuccinylase and related deacylases YP_003276087.1 COG2814, AraJ, Arabinose efflux permease YP_003276088.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003276089.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003276090.1 COG1062, AdhC, Zn-dependent alcohol dehydrogenases YP_003276091.1 COG2041, Sulfite oxidase and related enzymes YP_003276092.1 COG2010, CccA, Cytochrome c YP_003276094.1 COG0790, FOG: TPR repeat YP_003276095.1 COG1462, CsgG, Uncharacterized protein involved in formation ofcurli polymers YP_003276096.1 COG0277, GlcD, FAD/FMN-containing dehydrogenases YP_003276097.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276098.1 COG1744, Med, Uncharacterized ABC-type transport system YP_003276099.1 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) YP_003276100.1 COG2096, Uncharacterized conserved protein YP_003276101.1 COG0583, LysR, Transcriptional regulator YP_003276102.1 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) YP_003276103.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003276104.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003276105.1 COG1794, RacX, Aspartate racemase YP_003276106.1 COG4341, Predicted HD phosphohydrolase YP_003276107.1 COG0369, CysJ, Sulfite reductase YP_003276108.1 COG3396, Uncharacterized conserved protein YP_003276109.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003276110.1 COG1171, IlvA, Threonine dehydratase YP_003276111.1 COG0330, HflC, Membrane protease subunits YP_003276113.1 COG1274, PckA, Phosphoenolpyruvate carboxykinase (GTP) YP_003276114.1 COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003276115.1 COG0583, LysR, Transcriptional regulator YP_003276116.1 COG2908, Uncharacterized protein conserved in bacteria YP_003276117.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003276118.1 COG0583, LysR, Transcriptional regulator YP_003276119.1 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) YP_003276120.1 COG1846, MarR, Transcriptional regulators YP_003276121.1 COG2176, PolC, DNA polymerase III YP_003276122.1 COG1853, Conserved protein/domain typically associatedwith flavoprotein oxygenases YP_003276123.1 COG2175, TauD, Probable taurine catabolism dioxygenase YP_003276124.1 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex YP_003276125.1 COG0851, MinE, Septum formation topological specificity factor YP_003276126.1 COG2894, MinD, Septum formation inhibitor-activating ATPase YP_003276127.1 COG0850, MinC, Septum formation inhibitor YP_003276128.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003276129.1 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_003276130.1 COG1032, Fe-S oxidoreductase YP_003276131.1 COG2233, UraA, Xanthine/uracil permeases YP_003276132.1 COG0427, ACH1, Acetyl-CoA hydrolase YP_003276133.1 COG2050, PaaI, Uncharacterized protein YP_003276134.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003276135.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003276136.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003276137.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003276138.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003276139.1 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_003276140.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003276141.1 COG0703, AroK, Shikimate kinase YP_003276142.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003276143.1 COG4783, Putative Zn-dependent protease YP_003276144.1 COG5006, Predicted permease YP_003276145.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003276146.1 COG2270, Permeases of the major facilitator superfamily YP_003276147.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003276148.1 COG0642, BaeS, Signal transduction histidine kinase YP_003276149.1 COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase YP_003276150.1 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases YP_003276151.1 COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_003276152.1 COG3039, Transposase and inactivated derivatives YP_003276153.1 COG0463, WcaA, Glycosyltransferases involved in cell wallbiogenesis YP_003276154.1 COG0392, Predicted integral membrane protein YP_003276155.1 COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes YP_003276156.1 COG3306, Glycosyltransferase involved in LPS biosynthesis YP_003276157.1 COG0438, RfaG, Glycosyltransferase YP_003276158.1 COG4391, Uncharacterized protein conserved in bacteria YP_003276159.1 COG0115, IlvE, Branched-chain amino acidaminotransferase/4-amino-4-deoxychorismate lyase YP_003276160.1 COG0370, FeoB, Fe2+ transport system protein B YP_003276161.1 COG1066, Sms, Predicted ATP-dependent serine protease YP_003276162.1 COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase YP_003276163.1 COG3971, 2-keto-4-pentenoate hydratase YP_003276164.1 COG2326, Uncharacterized conserved protein YP_003276165.1 COG0583, LysR, Transcriptional regulator YP_003276166.1 COG4125, Predicted membrane protein YP_003276167.1 COG0786, GltS, Na+/glutamate symporter YP_003276168.1 COG1410, MetH, Methionine synthase I YP_003276169.1 COG1802, GntR, Transcriptional regulators YP_003276170.1 COG1301, GltP, Na+/H+-dicarboxylate symporters YP_003276171.1 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003276172.1 COG0004, AmtB, Ammonia permease YP_003276173.1 COG4585, Signal transduction histidine kinase YP_003276174.1 COG0584, UgpQ, Glycerophosphoryl diester phosphodiesterase YP_003276175.1 COG0133, TrpB, Tryptophan synthase beta chain YP_003276177.1 COG3596, Predicted GTPase YP_003276178.1 COG0642, BaeS, Signal transduction histidine kinase YP_003276179.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003276180.1 COG1538, TolC, Outer membrane protein YP_003276181.1 COG0577, SalY, ABC-type antimicrobial peptide transport system YP_003276182.1 COG1136, SalX, ABC-type antimicrobial peptide transport system YP_003276183.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003276184.1 COG4359, Uncharacterized conserved protein YP_003276185.1 COG1647, Esterase/lipase YP_003276186.1 COG2076, EmrE, Membrane transporters of cations and cationic drugs YP_003276187.1 COG2076, EmrE, Membrane transporters of cations and cationic drugs YP_003276188.1 COG0399, WecE, Predicted pyridoxal phosphate-dependent enzymeapparently involved in regulation of cell wallbiogenesis YP_003276189.1 COG1053, SdhA, Succinate dehydrogenase/fumarate reductase YP_003276190.1 COG1146, Ferredoxin YP_003276191.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003276192.1 COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases YP_003276193.1 COG0010, SpeB, Arginase/agmatinase/formimionoglutamate hydrolase YP_003276194.1 COG3146, Uncharacterized protein conserved in bacteria YP_003276195.1 COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases YP_003276196.1 COG0514, RecQ, Superfamily II DNA helicase YP_003276197.1 COG2188, PhnF, Transcriptional regulators YP_003276198.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003276199.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003276200.1 COG0583, LysR, Transcriptional regulator YP_003276201.1 COG5285, Protein involved in biosynthesis of mitomycinantibiotics/polyketide fumonisin YP_003276202.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003276203.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003276204.1 COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003276205.1 COG2188, PhnF, Transcriptional regulators YP_003276206.1 COG2986, HutH, Histidine ammonia-lyase YP_003276207.1 COG2188, PhnF, Transcriptional regulators YP_003276208.1 COG1457, CodB, Purine-cytosine permease and related proteins YP_003276209.1 COG2987, HutU, Urocanate hydratase YP_003276210.1 COG1473, AbgB, Metal-dependentamidase/aminoacylase/carboxypeptidase YP_003276211.1 COG3758, Uncharacterized protein conserved in bacteria YP_003276212.1 COG1228, HutI, Imidazolonepropionase and related amidohydrolases YP_003276213.1 COG0277, GlcD, FAD/FMN-containing dehydrogenases YP_003276214.1 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase andcobyric acid decarboxylase YP_003276215.1 COG2223, NarK, Nitrate/nitrite transporter YP_003276216.1 COG0402, SsnA, Cytosine deaminase and related metal-dependenthydrolases YP_003276217.1 COG3741, HutG, N-formylglutamate amidohydrolase YP_003276218.1 COG0789, SoxR, Predicted transcriptional regulators YP_003276219.1 COG0845, AcrA, Membrane-fusion protein YP_003276220.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003276221.1 COG1538, TolC, Outer membrane protein YP_003276222.1 COG3145, AlkB, Alkylated DNA repair protein YP_003276223.1 COG0646, MetH, Methionine synthase I (cobalamin-dependent) YP_003276225.1 COG3203, OmpC, Outer membrane protein (porin) YP_003276226.1 COG0502, BioB, Biotin synthase and related enzymes YP_003276227.1 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoateaminotransferase YP_003276228.1 COG0132, BioD, Dethiobiotin synthetase YP_003276229.1 COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes YP_003276230.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003276231.1 COG3135, BenE, Uncharacterized protein involved in benzoatemetabolism YP_003276232.1 COG0325, Predicted enzyme with a TIM-barrel fold YP_003276233.1 COG4992, ArgD, Ornithine/acetylornithine aminotransferase YP_003276234.1 COG0787, Alr, Alanine racemase YP_003276235.1 COG2814, AraJ, Arabinose efflux permease YP_003276236.1 COG2962, RarD, Predicted permeases YP_003276238.1 COG3284, AcoR, Transcriptional activator of acetoin/glycerolmetabolism YP_003276239.1 COG4993, Gcd, Glucose dehydrogenase YP_003276240.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003276241.1 COG3109, ProQ, Activator of osmoprotectant transporter ProP YP_003276242.1 COG0247, GlpC, Fe-S oxidoreductase YP_003276243.1 COG0277, GlcD, FAD/FMN-containing dehydrogenases YP_003276244.1 COG0004, AmtB, Ammonia permease YP_003276245.1 COG0347, GlnK, Nitrogen regulatory protein PII YP_003276247.1 COG3119, AslA, Arylsulfatase A and related enzymes YP_003276248.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276249.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276250.1 COG1846, MarR, Transcriptional regulators YP_003276251.1 COG0606, Predicted ATPase with chaperone activity YP_003276252.1 COG0583, LysR, Transcriptional regulator YP_003276253.1 COG2814, AraJ, Arabinose efflux permease YP_003276254.1 COG2070, Dioxygenases related to 2-nitropropanedioxygenase YP_003276255.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003276256.1 COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase YP_003276257.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003276258.1 COG3246, Uncharacterized conserved protein YP_003276259.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003276260.1 COG0583, LysR, Transcriptional regulator YP_003276261.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276262.1 COG3777, Uncharacterized conserved protein YP_003276263.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003276264.1 COG1190, LysU, Lysyl-tRNA synthetase (class II) YP_003276265.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003276266.1 COG2079, PrpD, Uncharacterized protein involved in propionatecatabolism YP_003276267.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276268.1 COG2301, CitE, Citrate lyase beta subunit YP_003276269.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003276270.1 COG0528, PyrH, Uridylate kinase YP_003276271.1 COG3863, Uncharacterized distant relative of cellwall-associated hydrolases YP_003276272.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003276273.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003276274.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003276275.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003276276.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003276277.1 COG1295, Rbn, Predicted membrane protein YP_003276278.1 COG0427, ACH1, Acetyl-CoA hydrolase YP_003276279.1 COG2721, UxaA, Altronate dehydratase YP_003276280.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276281.1 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_003276282.1 COG2186, FadR, Transcriptional regulators YP_003276283.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276284.1 COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminatelyase YP_003276285.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276286.1 COG1052, LdhA, Lactate dehydrogenase and related dehydrogenases YP_003276287.1 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_003276288.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003276289.1 COG0583, LysR, Transcriptional regulator YP_003276290.1 COG2761, FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_003276291.1 COG1878, Predicted metal-dependent hydrolase YP_003276292.1 COG1346, LrgB, Putative effector of murein hydrolase YP_003276293.1 COG1380, Putative effector of murein hydrolase LrgA YP_003276294.1 COG0583, LysR, Transcriptional regulator YP_003276295.1 COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase andrelated pseudouridylate synthases YP_003276296.1 COG2855, Predicted membrane protein YP_003276297.1 COG5373, Predicted membrane protein YP_003276298.1 COG0491, GloB, Zn-dependent hydrolases YP_003276299.1 COG3288, PntA, NAD/NADP transhydrogenase alpha subunit YP_003276300.1 COG1282, PntB, NAD/NADP transhydrogenase beta subunit YP_003276301.1 COG1280, RhtB, Putative threonine efflux protein YP_003276302.1 COG1522, Lrp, Transcriptional regulators YP_003276303.1 COG3241, Azurin YP_003276304.1 COG0708, XthA, Exonuclease III YP_003276305.1 COG0461, PyrE, Orotate phosphoribosyltransferase YP_003276306.1 COG1196, Smc, Chromosome segregation ATPases YP_003276307.1 COG1270, CbiB, Cobalamin biosynthesis protein CobD/CbiB YP_003276308.1 COG5656, SXM1, Importin YP_003276309.1 COG3448, CBS-domain-containing membrane protein YP_003276310.1 COG0778, NfnB, Nitroreductase YP_003276311.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003276312.1 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases YP_003276313.1 COG1297, Predicted membrane protein YP_003276314.1 COG5290, IkappaB kinase complex YP_003276315.1 COG3422, Uncharacterized conserved protein YP_003276316.1 COG2945, Predicted hydrolase of the alpha/beta superfamily YP_003276317.1 COG3583, Uncharacterized protein conserved in bacteria YP_003276318.1 COG0064, GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit(PET112 homolog) YP_003276319.1 similar to other amidases; COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunitand related amidases YP_003276320.1 COG0721, GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_003276321.1 COG1077, MreB, Actin-like ATPase involved in cell morphogenesis YP_003276322.1 COG1792, MreC, Cell shape-determining protein YP_003276323.1 COG2891, MreD, Cell shape-determining protein YP_003276324.1 COG0768, FtsI, Cell division protein FtsI/penicillin-bindingprotein 2 YP_003276325.1 COG0730, Predicted permeases YP_003276326.1 COG1571, Predicted DNA-binding protein containing aZn-ribbon domain YP_003276327.1 COG2303, BetA, Choline dehydrogenase and related flavoproteins YP_003276328.1 COG0767, Ttg2B, ABC-type transport system involved in resistance toorganic solvents YP_003276329.1 COG1127, Ttg2A, ABC-type transport system involved in resistance toorganic solvents YP_003276330.1 COG1463, Ttg2C, ABC-type transport system involved in resistance toorganic solvents YP_003276331.1 COG3218, ABC-type uncharacterized transport system YP_003276332.1 COG2703, Hemerythrin YP_003276333.1 COG2095, MarC, Multiple antibiotic transporter YP_003276334.1 COG0412, Dienelactone hydrolase and related enzymes YP_003276335.1 COG0598, CorA, Mg2+ and Co2+ transporters YP_003276336.1 COG0113, HemB, Delta-aminolevulinic acid dehydratase YP_003276337.1 COG1981, Predicted membrane protein YP_003276338.1 COG5652, Predicted integral membrane protein YP_003276339.1 COG3411, Ferredoxin YP_003276340.1 COG2945, Predicted hydrolase of the alpha/beta superfamily YP_003276341.1 COG1686, DacC, D-alanyl-D-alanine carboxypeptidase YP_003276342.1 COG1686, DacC, D-alanyl-D-alanine carboxypeptidase YP_003276343.1 COG0048, RpsL, Ribosomal protein S12 YP_003276344.1 COG0049, RpsG, Ribosomal protein S7 YP_003276345.1 COG0480, FusA, Translation elongation factors (GTPases) YP_003276346.1 COG0050, TufB, GTPases - translation elongation factors YP_003276347.1 COG0051, RpsJ, Ribosomal protein S10 YP_003276348.1 COG0087, RplC, Ribosomal protein L3 YP_003276349.1 COG0088, RplD, Ribosomal protein L4 YP_003276350.1 COG0089, RplW, Ribosomal protein L23 YP_003276351.1 COG0090, RplB, Ribosomal protein L2 YP_003276352.1 COG0185, RpsS, Ribosomal protein S19 YP_003276353.1 COG0091, RplV, Ribosomal protein L22 YP_003276354.1 COG0092, RpsC, Ribosomal protein S3 YP_003276355.1 COG0197, RplP, Ribosomal protein L16/L10E YP_003276356.1 COG0255, RpmC, Ribosomal protein L29 YP_003276357.1 COG0186, RpsQ, Ribosomal protein S17 YP_003276358.1 COG0678, AHP1, Peroxiredoxin YP_003276359.1 COG0456, RimI, Acetyltransferases YP_003276360.1 COG3658, Cytochrome b YP_003276361.1 COG3909, Cytochrome c556 YP_003276362.1 COG1225, Bcp, Peroxiredoxin YP_003276363.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003276364.1 COG2893, ManX, Phosphotransferase system YP_003276365.1 COG1925, FruB, Phosphotransferase system YP_003276366.1 COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_003276367.1 COG3878, Uncharacterized protein conserved in bacteria YP_003276368.1 COG0320, LipA, Lipoate synthase YP_003276369.1 COG0321, LipB, Lipoate-protein ligase B YP_003276370.1 COG2921, Uncharacterized conserved protein YP_003276371.1 COG3312, AtpI, F0F1-type ATP synthase YP_003276372.1 COG0356, AtpB, F0F1-type ATP synthase YP_003276373.1 COG0636, AtpE, F0F1-type ATP synthase YP_003276374.1 COG0711, AtpF, F0F1-type ATP synthase YP_003276375.1 COG0712, AtpH, F0F1-type ATP synthase YP_003276376.1 COG0056, AtpA, F0F1-type ATP synthase YP_003276377.1 COG0224, AtpG, F0F1-type ATP synthase YP_003276378.1 COG0055, AtpD, F0F1-type ATP synthase YP_003276379.1 COG0355, AtpC, F0F1-type ATP synthase YP_003276380.1 COG2913, SmpA, Small protein A (tmRNA-binding) YP_003276381.1 COG3326, Predicted membrane protein YP_003276382.1 COG3762, Predicted membrane protein YP_003276383.1 COG1512, Beta-propeller domains of methanol dehydrogenase type YP_003276384.1 COG1704, LemA, Uncharacterized conserved protein YP_003276385.1 COG0289, DapB, Dihydrodipicolinate reductase YP_003276386.1 COG0429, Predicted hydrolase of the alpha/beta-hydrolasefold YP_003276387.1 COG4804, Uncharacterized conserved protein YP_003276388.1 COG3245, CycB, Cytochrome c5 YP_003276389.1 COG1538, TolC, Outer membrane protein YP_003276390.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003276391.1 COG0845, AcrA, Membrane-fusion protein YP_003276392.1 COG1309, AcrR, Transcriptional regulator YP_003276393.1 COG0050, TufB, GTPases - translation elongation factors YP_003276394.1 COG0690, SecE, Preprotein translocase subunit SecE YP_003276395.1 COG0250, NusG, Kantiterminator YP_003276396.1 COG0080, RplK, Ribosomal protein L11 YP_003276397.1 COG0081, RplA, Ribosomal protein L1 YP_003276398.1 COG0244, RplJ, Ribosomal protein L10 YP_003276399.1 COG0222, RplL, Ribosomal protein L7/L12 YP_003276400.1 COG0085, RpoB, DNA-directed RNA polymerase YP_003276401.1 COG0086, RpoC, DNA-directed RNA polymerase YP_003276402.1 COG0144, Sun, tRNA and rRNA cytosine-C5-methylases YP_003276403.1 COG1140, NarY, Nitrate reductase beta subunit YP_003276404.1 COG5000, NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_003276405.1 COG2204, AtoC, Response regulator containing CheY-like receiver YP_003276406.1 COG1330, RecC, Exonuclease V gamma subunit YP_003276407.1 COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_003276408.1 COG0507, RecD, ATP-dependent exoDNAse (exonuclease V) YP_003276409.1 COG3565, Predicted dioxygenase of extradiol dioxygenasefamily YP_003276410.1 COG0625, Gst, Glutathione S-transferase YP_003276411.1 COG3968, Uncharacterized protein related to glutaminesynthetase YP_003276412.1 COG2847, Uncharacterized protein conserved in bacteria YP_003276413.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003276414.1 COG4398, Uncharacterized protein conserved in bacteria YP_003276415.1 COG4950, Uncharacterized protein conserved in bacteria YP_003276416.1 COG2072, TrkA, Predicted flavoprotein involved in K+ transport YP_003276417.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276418.1 COG4991, Uncharacterized protein with a bacterial SH3domain homologue YP_003276419.1 COG3655, Predicted transcriptional regulator YP_003276421.1 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003276422.1 COG3720, HemS, Putative heme degradation protein YP_003276423.1 COG5338, Uncharacterized protein conserved in bacteria YP_003276425.1 COG4727, Uncharacterized protein conserved in bacteria YP_003276426.1 COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis YP_003276427.1 COG2199, FOG: GGDEF domain YP_003276428.1 COG0343, Tgt, Queuine/archaeosine tRNA-ribosyltransferase YP_003276429.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003276430.1 COG1537, PelA, Predicted RNA-binding proteins YP_003276431.1 COG1846, MarR, Transcriptional regulators YP_003276432.1 COG1902, NemA, NADH:flavin oxidoreductases YP_003276433.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003276434.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003276435.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003276436.1 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_003276437.1 COG0824, FcbC, Predicted thioesterase YP_003276438.1 COG0251, TdcF, Putative translation initiation inhibitor YP_003276439.1 COG2755, TesA, Lysophospholipase L1 and related esterases YP_003276440.1 COG2829, PldA, Outer membrane phospholipase A YP_003276441.1 COG1274, PckA, Phosphoenolpyruvate carboxykinase (GTP) YP_003276442.1 COG0210, UvrD, Superfamily I DNA and RNA helicases YP_003276443.1 COG1180, PflA, Pyruvate-formate lyase-activating enzyme YP_003276444.1 COG2229, Predicted GTPase YP_003276445.1 COG2018, Uncharacterized distant relative of homeoticprotein bithoraxoid YP_003276446.1 COG0045, SucC, Succinyl-CoA synthetase YP_003276447.1 COG0679, Predicted permeases YP_003276448.1 COG0252, AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferasesubunit D YP_003276449.1 COG1198, PriA, Primosomal protein N' (replication factor Y) -superfamily II helicase YP_003276450.1 COG0407, HemE, Uroporphyrinogen-III decarboxylase YP_003276451.1 COG3176, Putative hemolysin YP_003276453.1 COG3324, Predicted enzyme related to lactoylglutathionelyase YP_003276454.1 COG4232, Thiol:disulfide interchange protein YP_003276455.1 COG0534, NorM, Na+-driven multidrug efflux pump YP_003276456.1 COG1402, Uncharacterized protein YP_003276457.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276458.1 COG4258, Predicted exporter YP_003276459.1 COG0406, GpmB, Fructose-2 YP_003276460.1 COG1840, AfuA, ABC-type Fe3+ transport system YP_003276461.1 COG1178, ThiP, ABC-type Fe3+ transport system YP_003276462.1 COG3842, PotA, ABC-type spermidine/putrescine transport systems YP_003276463.1 COG0384, Predicted epimerase YP_003276464.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003276465.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003276466.1 COG3394, Uncharacterized protein conserved in bacteria YP_003276467.1 COG2246, Predicted membrane protein YP_003276468.1 COG0463, WcaA, Glycosyltransferases involved in cell wallbiogenesis YP_003276469.1 COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_003276470.1 COG0480, FusA, Translation elongation factors (GTPases) YP_003276471.1 COG2747, FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_003276472.1 COG1261, FlgA, Flagellar basal body P-ring biosynthesis protein YP_003276473.1 COG1815, FlgB, Flagellar basal body protein YP_003276474.1 COG1558, FlgC, Flagellar basal body rod protein YP_003276475.1 COG1843, FlgD, Flagellar hook capping protein YP_003276476.1 COG1749, FlgE, Flagellar hook protein FlgE YP_003276477.1 COG4787, FlgF, Flagellar basal body rod protein YP_003276478.1 COG4786, FlgG, Flagellar basal body rod protein YP_003276479.1 COG2063, FlgH, Flagellar basal body L-ring protein YP_003276480.1 COG1706, FlgI, Flagellar basal-body P-ring protein YP_003276481.1 COG1705, FlgJ, Muramidase (flagellum-specific) YP_003276482.1 COG1256, FlgK, Flagellar hook-associated protein YP_003276483.1 COG1344, FlgL, Flagellin and related hook-associated proteins YP_003276484.1 COG3434, Predicted signal transduction protein containingEAL and modified HD-GYP domains YP_003276485.1 COG1377, FlhB, Flagellar biosynthesis pathway YP_003276486.1 COG1298, FlhA, Flagellar biosynthesis pathway YP_003276487.1 COG1419, FlhF, Flagellar GTP-binding protein YP_003276488.1 COG2902, NAD-specific glutamate dehydrogenase YP_003276489.1 COG1191, FliA, DNA-directed RNA polymerase specialized sigmasubunit YP_003276490.1 COG4389, Site-specific recombinase YP_003276491.1 COG1516, FliS, Flagellin-specific chaperone FliS YP_003276492.1 COG1345, FliD, Flagellar capping protein YP_003276493.1 COG1344, FlgL, Flagellin and related hook-associated proteins YP_003276494.1 COG1344, FlgL, Flagellin and related hook-associated proteins YP_003276495.1 COG1291, MotA, Flagellar motor component YP_003276496.1 COG1360, MotB, Flagellar motor protein YP_003276497.1 COG2204, AtoC, Response regulator containing CheY-like receiver YP_003276498.1 COG3143, CheZ, Chemotaxis protein YP_003276499.1 COG1677, FliE, Flagellar hook-basal body protein YP_003276500.1 COG1766, FliF, Flagellar biosynthesis/type III secretory pathwaylipoprotein YP_003276501.1 COG1536, FliG, Flagellar motor switch protein YP_003276502.1 COG1317, FliH, Flagellar biosynthesis/type III secretory pathwayprotein YP_003276503.1 COG1157, FliI, Flagellar biosynthesis/type III secretory pathwayATPase YP_003276504.1 COG2882, FliJ, Flagellar biosynthesis chaperone YP_003276505.1 COG3144, FliK, Flagellar hook-length control protein YP_003276506.1 COG1580, FliL, Flagellar basal body-associated protein YP_003276507.1 COG1868, FliM, Flagellar motor switch protein YP_003276508.1 COG1886, FliN, Flagellar motor switch/type III secretory pathwayprotein YP_003276509.1 COG3190, FliO, Flagellar biogenesis protein YP_003276510.1 COG1338, FliP, Flagellar biosynthesis pathway YP_003276511.1 COG1987, FliQ, Flagellar biosynthesis pathway YP_003276512.1 COG1684, FliR, Flagellar biosynthesis pathway YP_003276513.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003276514.1 COG4585, Signal transduction histidine kinase YP_003276515.1 COG3437, Response regulator containing a CheY-likereceiver domain and an HD-GYP domain YP_003276516.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003276517.1 COG0643, CheA, Chemotaxis protein histidine kinase and related kinases YP_003276518.1 COG0835, CheW, Chemotaxis signal transduction protein YP_003276519.1 COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins YP_003276520.1 stimulates methylation of MCP proteins; COG1871, CheD, Chemotaxis protein; stimulates methylation of MCPproteins YP_003276521.1 COG2201, CheB, Chemotaxis response regulator containing a CheY-likereceiver domain and a methylesterase domain YP_003276522.1 COG0488, Uup, ATPase components of ABC transporters with duplicatedATPase domains YP_003276523.1 COG0491, GloB, Zn-dependent hydrolases YP_003276524.1 COG0789, SoxR, Predicted transcriptional regulators YP_003276525.1 COG2050, PaaI, Uncharacterized protein YP_003276526.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003276527.1 COG0288, CynT, Carbonic anhydrase YP_003276528.1 COG4579, Isocitrate dehydrogenase kinase/phosphatase YP_003276529.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003276530.1 COG0465, HflB, ATP-dependent Zn proteases YP_003276531.1 COG3576, Predicted flavin-nucleotide-binding proteinstructurally related to pyridoxine 5'-phosphate oxidase YP_003276532.1 COG0300, DltE, Short-chain dehydrogenases of various substratespecificities YP_003276533.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003276534.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003276535.1 COG2323, Predicted membrane protein YP_003276536.1 COG3012, Uncharacterized protein conserved in bacteria YP_003276537.1 COG0642, BaeS, Signal transduction histidine kinase YP_003276538.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003276539.1 COG1512, Beta-propeller domains of methanol dehydrogenasetype YP_003276540.1 COG0637, Predicted phosphatase/phosphohexomutase YP_003276541.1 COG3164, Predicted membrane protein YP_003276542.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003276543.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003276544.1 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters YP_003276545.1 COG4799, Acetyl-CoA carboxylase YP_003276546.1 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_003276547.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003276549.1 COG4770, Acetyl/propionyl-CoA carboxylase YP_003276550.1 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases YP_003276551.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003276552.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003276553.1 COG2606, EbsC, Uncharacterized conserved protein YP_003276554.1 COG3313, Predicted Fe-S protein YP_003276555.1 COG3917, NahD, 2-hydroxychromene-2-carboxylate isomerase YP_003276556.1 COG1169, MenF, Isochorismate synthase YP_003276557.1 COG1858, MauG, Cytochrome c peroxidase YP_003276558.1 COG4147, DhlC, Predicted symporter YP_003276559.1 COG3162, Predicted membrane protein YP_003276560.1 COG2814, AraJ, Arabinose efflux permease YP_003276561.1 COG3203, OmpC, Outer membrane protein (porin) YP_003276562.1 COG1681, FlaB, Archaeal flagellins YP_003276563.1 COG0178, UvrA, Excinuclease ATPase subunit YP_003276564.1 COG5426, Uncharacterized membrane protein YP_003276565.1 COG1593, DctQ, TRAP-type C4-dicarboxylate transport system YP_003276566.1 COG3090, DctM, TRAP-type C4-dicarboxylate transport system YP_003276567.1 COG1638, DctP, TRAP-type C4-dicarboxylate transport system YP_003276568.1 COG0561, Cof, Predicted hydrolases of the HAD superfamily YP_003276569.1 COG4108, PrfC, Peptide chain release factor RF-3 YP_003276570.1 COG2814, AraJ, Arabinose efflux permease YP_003276571.1 COG2060, KdpA, K+-transporting ATPase YP_003276572.1 COG2156, KdpC, K+-transporting ATPase YP_003276573.1 COG2216, KdpB, High-affinity K+ transport system YP_003276574.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003276575.1 COG2205, KdpD, Osmosensitive K+ channel histidine kinase YP_003276576.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003276577.1 COG0499, SAM1, S-adenosylhomocysteine hydrolase YP_003276578.1 COG1189, Predicted rRNA methylase YP_003276579.1 COG0685, MetF, 5 YP_003276580.1 COG0797, RlpA, Lipoproteins YP_003276581.1 COG2961, ComJ, Protein involved in catabolism of external DNA YP_003276582.1 COG0102, RplM, Ribosomal protein L13 YP_003276583.1 COG0103, RpsI, Ribosomal protein S9 YP_003276584.1 COG0316, IscA, Uncharacterized conserved protein YP_003276585.1 COG2814, AraJ, Arabinose efflux permease YP_003276586.1 COG4630, XdhA, Xanthine dehydrogenase YP_003276587.1 COG4631, XdhB, Xanthine dehydrogenase YP_003276588.1 COG2252, Permeases YP_003276589.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003276590.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003276591.1 COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003276592.1 COG2141, Coenzyme F420-dependent N5 YP_003276593.1 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metal loproteases YP_003276594.1 COG0739, NlpD, Membrane proteins related to metalloendopeptidases YP_003276595.1 COG0162, TyrS, Tyrosyl-tRNA synthetase YP_003276596.1 COG0583, LysR, Transcriptional regulator YP_003276597.1 COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase(contains nucleotidyltransferase and I-patchacetyltransferase domains) YP_003276598.1 COG2205, KdpD, Osmosensitive K+ channel histidine kinase YP_003276599.1 COG2199, FOG: GGDEF domain YP_003276600.1 COG1522, Lrp, Transcriptional regulators YP_003276601.1 COG0449, GlmS, Glucosamine 6-phosphate synthetase YP_003276602.1 COG1593, DctQ, TRAP-type C4-dicarboxylate transport system YP_003276603.1 COG3090, DctM, TRAP-type C4-dicarboxylate transport system YP_003276604.1 COG1638, DctP, TRAP-type C4-dicarboxylate transport system YP_003276605.1 COG1802, GntR, Transcriptional regulators YP_003276606.1 COG3819, Predicted membrane protein YP_003276607.1 COG3817, Predicted membrane protein YP_003276608.1 COG2039, Pcp, Pyrrolidone-carboxylate peptidase (N-terminalpyroglutamyl peptidase) YP_003276609.1 COG1540, Uncharacterized proteins YP_003276610.1 COG1984, DUR1, Allophanate hydrolase subunit 2 YP_003276611.1 COG4770, Acetyl/propionyl-CoA carboxylase YP_003276612.1 COG2217, ZntA, Cation transport ATPase YP_003276613.1 COG0307, RibC, Riboflavin synthase alpha chain YP_003276614.1 COG4801, Predicted acyltransferase YP_003276615.1 COG1363, FrvX, Cellulase M and related proteins YP_003276616.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003276617.1 COG5383, Uncharacterized protein conserved in bacteria YP_003276618.1 COG0583, LysR, Transcriptional regulator YP_003276619.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003276620.1 COG2211, MelB, Na+/melibiose symporter and related transporters YP_003276621.1 COG0544, Tig, FKBP-type peptidyl-prolyl cis-trans isomerase(trigger factor) YP_003276622.1 COG0443, DnaK, Molecular chaperone YP_003276623.1 COG3203, OmpC, Outer membrane protein (porin) YP_003276624.1 COG0443, DnaK, Molecular chaperone YP_003276625.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276627.1 COG3707, AmiR, Response regulator with putative antiterminatoroutput domain YP_003276628.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003276629.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003276630.1 COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003276631.1 COG1251, NirB, NAD(P)H-nitrite reductase YP_003276632.1 COG2146 YP_003276633.1 COG0243, BisC, Anaerobic dehydrogenases YP_003276634.1 COG0007, CysG, Uroporphyrinogen-III methylase YP_003276635.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003276636.1 COG4206, BtuB, Outer membrane cobalamin receptor protein YP_003276637.1 COG2998, TupB, ABC-type tungstate transport system YP_003276638.1 COG0413, PanB, Ketopantoate hydroxymethyltransferase YP_003276639.1 COG0614, FepB, ABC-type Fe3+-hydroxamate transport system YP_003276640.1 COG0609, FepD, ABC-type Fe3+-siderophore transport system YP_003276641.1 COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transportsystems YP_003276642.1 COG1289, Predicted membrane protein YP_003276643.1 COG1846, MarR, Transcriptional regulators YP_003276644.1 COG2855, Predicted membrane protein YP_003276645.1 COG0583, LysR, Transcriptional regulator YP_003276646.1 COG2987, HutU, Urocanate hydratase YP_003276647.1 COG3045, CreA, Uncharacterized protein conserved in bacteria YP_003276648.1 COG2814, AraJ, Arabinose efflux permease YP_003276649.1 COG1629, CirA, Outer membrane receptor proteins YP_003276650.1 COG3416, Uncharacterized protein conserved in bacteria YP_003276651.1 COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase YP_003276652.1 COG1181, DdlA, D-alanine-D-alanine ligase and related ATP-graspenzymes YP_003276653.1 COG1132, MdlB, ABC-type multidrug transport system YP_003276654.1 COG1316, LytR, Transcriptional regulator YP_003276655.1 COG3701, TrbF, Type IV secretory pathway YP_003276656.1 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) YP_003276657.1 COG0566, SpoU, rRNA methylases YP_003276658.1 COG0004, AmtB, Ammonia permease YP_003276659.1 COG1459, PulF, Type II secretory pathway YP_003276660.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003276661.1 COG0625, Gst, Glutathione S-transferase YP_003276662.1 COG2378, Predicted transcriptional regulator YP_003276663.1 COG2141, Coenzyme F420-dependent N5 YP_003276666.1 COG2771, CsgD, DNA-binding HTH domain-containing proteins YP_003276667.1 COG2804, PulE, Type II secretory pathway YP_003276668.1 COG1450, PulD, Type II secretory pathway YP_003276670.1 COG3149, PulM, Type II secretory pathway YP_003276671.1 COG3297, PulL, Type II secretory pathway YP_003276672.1 COG3156, PulK, Type II secretory pathway YP_003276673.1 COG4795, PulJ, Type II secretory pathway YP_003276674.1 COG2165, PulG, Type II secretory pathway YP_003276675.1 COG2165, PulG, Type II secretory pathway YP_003276676.1 COG2165, PulG, Type II secretory pathway YP_003276677.1 COG3159, Uncharacterized protein conserved in bacteria YP_003276678.1 COG0406, GpmB, Fructose-2 YP_003276679.1 COG0368, CobS, Cobalamin-5-phosphate synthase YP_003276680.1 COG1171, IlvA, Threonine dehydratase YP_003276681.1 COG1765, Predicted redox protein YP_003276682.1 COG2941, CAT5, Ubiquinone biosynthesis protein COQ7 YP_003276683.1 COG3203, OmpC, Outer membrane protein (porin) YP_003276684.1 COG3203, OmpC, Outer membrane protein (porin) YP_003276685.1 COG0459, GroL, Chaperonin GroEL (HSP60 family) YP_003276686.1 COG0234, GroS, Co-chaperonin GroES (HSP10) YP_003276687.1 COG0835, CheW, Chemotaxis signal transduction protein YP_003276688.1 COG2916, Hns, DNA-binding protein H-NS YP_003276689.1 COG1247, Sortase and related acyltransferases YP_003276690.1 COG1056, NadR, Nicotinamide mononucleotide adenylyltransferase YP_003276692.1 COG1488, PncB, Nicotinic acid phosphoribosyltransferase YP_003276693.1 COG1335, PncA, Amidases related to nicotinamidase YP_003276694.1 COG1051, ADP-ribose pyrophosphatase YP_003276696.1 COG0192, MetK, S-adenosylmethionine synthetase YP_003276697.1 COG1560, HtrB, Lauroyl/myristoyl acyltransferase YP_003276698.1 COG1560, HtrB, Lauroyl/myristoyl acyltransferase YP_003276699.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003276700.1 COG0218, Predicted GTPase YP_003276701.1 COG2863, Cytochrome c553 YP_003276702.1 COG1333, ResB, ResB protein required for cytochrome c biosynthesis YP_003276703.1 COG0755, CcmC, ABC-type transport system involved in cytochrome cbiogenesis YP_003276704.1 COG2041, Sulfite oxidase and related enzymes YP_003276705.1 COG2717, Predicted membrane protein YP_003276706.1 COG0426, FpaA, Uncharacterized flavoproteins YP_003276707.1 COG5567, Predicted small periplasmic lipoprotein YP_003276708.1 COG1965, CyaY, Protein implicated in iron transport YP_003276709.1 COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein YP_003276710.1 COG4972, PilM, Tfp pilus assembly protein YP_003276711.1 COG3166, PilN, Tfp pilus assembly protein PilN YP_003276712.1 COG3167, PilO, Tfp pilus assembly protein PilO YP_003276713.1 COG3168, PilP, Tfp pilus assembly protein PilP YP_003276714.1 COG4796, HofQ, Type II secretory pathway YP_003276715.1 COG0703, AroK, Shikimate kinase YP_003276716.1 COG0337, AroB, 3-dehydroquinate synthetase YP_003276717.1 COG0232, Dgt, dGTP triphosphohydrolase YP_003276718.1 COG3310, Uncharacterized protein conserved in bacteria YP_003276719.1 COG4123, Predicted O-methyltransferase YP_003276720.1 COG0166, Pgi, Glucose-6-phosphate isomerase YP_003276721.1 COG0176, MipB, Transaldolase YP_003276722.1 COG1737, RpiR, Transcriptional regulators YP_003276723.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003276724.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276725.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003276726.1 COG2057, AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase YP_003276727.1 COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase YP_003276728.1 COG1414, IclR, Transcriptional regulator YP_003276729.1 COG1943, Transposase and inactivated derivatives YP_003276730.1 COG0069, GltB, Glutamate synthase domain 2 YP_003276731.1 COG0493, GltD, NADPH-dependent glutamate synthase beta chain andrelated oxidoreductases YP_003276732.1 COG4167, SapF, ABC-type antimicrobial peptide transport system YP_003276733.1 COG3868, Uncharacterized conserved protein YP_003276734.1 COG4942, Membrane-bound metallopeptidase YP_003276735.1 COG5616, Predicted integral membrane protein YP_003276736.1 COG3180, AbrB, Putative ammonia monooxygenase YP_003276737.1 COG2386, CcmB, ABC-type transport system involved in cytochrome cbiogenesis YP_003276738.1 COG0438, RfaG, Glycosyltransferase YP_003276739.1 COG4267, Predicted membrane protein YP_003276740.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003276741.1 COG0765, HisM, ABC-type amino acid transport system YP_003276742.1 COG1126, GlnQ, ABC-type polar amino acid transport system YP_003276743.1 COG1127, Ttg2A, ABC-type transport system involved in resistance toorganic solvents YP_003276744.1 COG0767, Ttg2B, ABC-type transport system involved in resistance toorganic solvents YP_003276745.1 COG1463, Ttg2C, ABC-type transport system involved in resistance toorganic solvents YP_003276746.1 COG2853, VacJ, Surface lipoprotein YP_003276747.1 COG2854, Ttg2D, ABC-type transport system involved in resistance toorganic solvents YP_003276748.1 COG1366, SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_003276749.1 COG1131, CcmA, ABC-type multidrug transport system YP_003276750.1 COG0842, ABC-type multidrug transport system YP_003276751.1 COG5007, Predicted transcriptional regulator YP_003276752.1 COG0766, MurA, UDP-N-acetylglucosamine enolpyruvyl transferase YP_003276753.1 COG0040, HisG, ATP phosphoribosyltransferase YP_003276754.1 COG0141, HisD, Histidinol dehydrogenase YP_003276755.1 COG1736, DPH2, Diphthamide synthase subunit DPH2 YP_003276756.1 COG1680, AmpC, Beta-lactamase class C and other penicillin bindingproteins YP_003276757.1 COG0497, RecN, ATPase involved in DNA repair YP_003276758.1 COG1848, Predicted nucleic acid-binding protein YP_003276759.1 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase andcobyric acid decarboxylase YP_003276760.1 COG0131, HisB, Imidazoleglycerol-phosphate dehydratase YP_003276761.1 COG0118, HisH, Glutamine amidotransferase YP_003276762.1 COG0106, HisA, Phosphoribosylformimino-5-aminoimidazole carboxamideribonucleotide (ProFAR) isomerase YP_003276763.1 COG0676, Uncharacterized enzymes related to aldose1-epimerase YP_003276764.1 COG5330, Uncharacterized protein conserved in bacteria YP_003276765.1 COG5298, Uncharacterized protein conserved in bacteria YP_003276766.1 COG0387, ChaA, Ca2+/H+ antiporter YP_003276767.1 COG3063, PilF, Tfp pilus assembly protein PilF YP_003276768.1 COG1215, Glycosyltransferases YP_003276769.1 COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase YP_003276770.1 COG1109 YP_003276771.1 COG0107, HisF, Imidazoleglycerol-phosphate synthase YP_003276772.1 COG0139, HisI, Phosphoribosyl-AMP cyclohydrolase YP_003276773.1 COG0140, HisI, Phosphoribosyl-ATP pyrophosphohydrolase YP_003276774.1 COG3671, Predicted membrane protein YP_003276775.1 COG1752, RssA, Predicted esterase of the alpha-beta hydrolasesuperfamily YP_003276776.1 COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and otherHIT family hydrolases YP_003276777.1 COG1826, TatA, Sec-independent protein secretion pathway components YP_003276778.1 COG1826, TatA, Sec-independent protein secretion pathway components YP_003276779.1 COG0805, TatC, Sec-independent protein secretion pathway componentTatC YP_003276780.1 COG0265, DegQ, Trypsin-like serine proteases YP_003276781.1 COG2814, AraJ, Arabinose efflux permease YP_003276782.1 COG1802, GntR, Transcriptional regulators YP_003276783.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003276784.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276785.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003276786.1 COG0327, Uncharacterized conserved protein YP_003276787.1 COG1995, PdxA, Pyridoxal phosphate biosynthesis protein YP_003276788.1 COG1970, MscL, Large-conductance mechanosensitive channel YP_003276789.1 COG0723, QcrA, Rieske Fe-S protein YP_003276790.1 COG1290, QcrB, Cytochrome b subunit of the bc complex YP_003276791.1 COG2857, CYT1, Cytochrome c1 YP_003276792.1 COG0625, Gst, Glutathione S-transferase YP_003276793.1 COG2969, SspB, Stringent starvation protein B YP_003276794.1 COG4966, PilW, Tfp pilus assembly protein PilW YP_003276795.1 COG0653, SecA, Preprotein translocase subunit SecA (ATPase YP_003276796.1 COG1364, ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) YP_003276797.1 COG2607, Predicted ATPase (AAA+ superfamily) YP_003276798.1 COG1051, ADP-ribose pyrophosphatase YP_003276799.1 COG3024, Uncharacterized protein conserved in bacteria YP_003276800.1 COG4582, Uncharacterized protein conserved in bacteria YP_003276801.1 COG0237, CoaE, Dephospho-CoA kinase YP_003276802.1 COG1989, PulO, Type II secretory pathway YP_003276803.1 COG1459, PulF, Type II secretory pathway YP_003276804.1 COG2804, PulE, Type II secretory pathway YP_003276805.1 COG0142, IspA, Geranylgeranyl pyrophosphate synthase YP_003276806.1 COG0261, RplU, Ribosomal protein L21 YP_003276807.1 COG0211, RpmA, Ribosomal protein L27 YP_003276808.1 COG0536, Obg, Predicted GTPase YP_003276809.1 COG0263, ProB, Glutamate 5-kinase YP_003276810.1 COG0494, MutT, NTP pyrophosphohydrolases including oxidative damagerepair enzymes YP_003276811.1 COG0442, ProS, Prolyl-tRNA synthetase YP_003276812.1 COG0741, MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003276813.1 COG1253, TlyC, Hemolysins and related proteins containing CBSdomains YP_003276814.1 COG0328, RnhA, Ribonuclease HI YP_003276815.1 COG0278, Glutaredoxin-related protein YP_003276816.1 COG2890, HemK, Methylase of polypeptide chain release factors YP_003276817.1 COG1737, RpiR, Transcriptional regulators YP_003276818.1 COG0574, PpsA, Phosphoenolpyruvate synthase/pyruvate phosphatedikinase YP_003276819.1 COG0216, PrfA, Protein chain release factor A YP_003276820.1 COG0373, HemA, Glutamyl-tRNA reductase YP_003276821.1 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis YP_003276822.1 COG0583, LysR, Transcriptional regulator YP_003276823.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276824.1 COG3741, HutG, N-formylglutamate amidohydrolase YP_003276825.1 COG0790, FOG: TPR repeat YP_003276826.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276827.1 COG0584, UgpQ, Glycerophosphoryl diester phosphodiesterase YP_003276828.1 COG3839, MalK, ABC-type sugar transport systems YP_003276829.1 COG0395, UgpE, ABC-type sugar transport system YP_003276830.1 COG1175, UgpA, ABC-type sugar transport systems YP_003276831.1 COG1653, UgpB, ABC-type sugar transport system YP_003276832.1 COG0247, GlpC, Fe-S oxidoreductase YP_003276833.1 COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and otherHIT family hydrolases YP_003276834.1 COG3536, Uncharacterized protein conserved in bacteria YP_003276835.1 COG2226, UbiE, Methylase involved in ubiquinone/menaquinonebiosynthesis YP_003276836.1 COG4395, Uncharacterized protein conserved in bacteria YP_003276837.1 COG3165, Uncharacterized protein conserved in bacteria YP_003276838.1 COG0661, AarF, Predicted unusual protein kinase YP_003276839.1 COG0591, PutP, Na+/proline symporter YP_003276840.1 COG2331, Uncharacterized protein conserved in bacteria YP_003276841.1 COG2928, Uncharacterized conserved protein YP_003276842.1 COG0173, AspS, Aspartyl-tRNA synthetase YP_003276843.1 COG0494, MutT, NTP pyrophosphohydrolases including oxidative damagerepair enzymes YP_003276844.1 COG3568, ElsH, Metal-dependent hydrolase YP_003276845.1 COG0302, FolE, GTP cyclohydrolase I YP_003276846.1 COG2076, EmrE, Membrane transporters of cations and cationic drugs YP_003276847.1 COG1280, RhtB, Putative threonine efflux protein YP_003276848.1 COG0747, DdpA, ABC-type dipeptide transport system YP_003276849.1 COG1123, ATPase components of various ABC-type transportsystems YP_003276850.1 COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transportsystem YP_003276851.1 COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transportsystems YP_003276852.1 COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transportsystems YP_003276853.1 COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinoneoxidoreductase 23 kD subunit (chain I) YP_003276854.1 COG0193, Pth, Peptidyl-tRNA hydrolase YP_003276855.1 COG1825, RplY, Ribosomal protein L25 (general stress protein Ctc) YP_003276856.1 COG0462, PrsA, Phosphoribosylpyrophosphate synthetase YP_003276857.1 COG1947, IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol2-phosphate synthase YP_003276858.1 COG3017, LolB, Outer membrane lipoprotein involved in outermembrane biogenesis YP_003276859.1 COG5010, TadD, Flp pilus assembly protein TadD YP_003276860.1 COG0266, Nei, Formamidopyrimidine-DNA glycosylase YP_003276861.1 COG1160, Predicted GTPases YP_003276862.1 COG1194, MutY, A/G-specific DNA glycosylase YP_003276863.1 COG3898, Uncharacterized membrane-bound protein YP_003276864.1 COG4452, CreD, Inner membrane protein involved in colicin E2resistance YP_003276865.1 COG0642, BaeS, Signal transduction histidine kinase YP_003276866.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003276867.1 COG1660, Predicted P-loop-containing kinase YP_003276868.1 COG0497, RecN, ATPase involved in DNA repair YP_003276869.1 COG0061, Predicted sugar kinase YP_003276870.1 COG1420, HrcA, Transcriptional regulator of heat shock gene YP_003276871.1 COG4252, Predicted transmembrane sensor domain YP_003276872.1 COG4254, Uncharacterized protein conserved in bacteria YP_003276873.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003276874.1 COG0180, TrpS, Tryptophanyl-tRNA synthetase YP_003276875.1 COG1994, SpoIVFB, Zn-dependent proteases YP_003276876.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003276877.1 COG3428, Predicted membrane protein YP_003276878.1 COG0009, SUA5, Putative translation factor (SUA5) YP_003276879.1 COG0613, Predicted metal-dependent phosphoesterases (PHPfamily) YP_003276880.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003276881.1 COG0608, RecJ, Single-stranded DNA-specific exonuclease YP_003276882.1 COG4255, Uncharacterized protein conserved in bacteria YP_003276883.1 COG3119, AslA, Arylsulfatase A and related enzymes YP_003276884.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276885.1 COG1846, MarR, Transcriptional regulators YP_003276886.1 COG4591, LolE, ABC-type transport system YP_003276887.1 COG1136, SalX, ABC-type antimicrobial peptide transport system YP_003276888.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003276889.1 COG0084, TatD, Mg-dependent DNase YP_003276890.1 COG3663, Mug, G:T/U mismatch-specific DNA glycosylase YP_003276891.1 COG0421, SpeE, Spermidine synthase YP_003276892.1 COG4372, Uncharacterized protein conserved in bacteriawith the myosin-like domain YP_003276893.1 COG2804, PulE, Type II secretory pathway YP_003276895.1 COG3333, Uncharacterized protein conserved in bacteria YP_003276896.1 COG4949, Uncharacterized membrane-anchored proteinconserved in bacteria YP_003276897.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003276898.1 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily YP_003276899.1 COG0494, MutT, NTP pyrophosphohydrolases including oxidative damagerepair enzymes YP_003276900.1 COG1283, NptA, Na+/phosphate symporter YP_003276901.1 COG0029, NadB, Aspartate oxidase YP_003276902.1 COG0597, LspA, Lipoprotein signal peptidase YP_003276903.1 COG0060, IleS, Isoleucyl-tRNA synthetase YP_003276905.1 COG1403, McrA, Restriction endonuclease YP_003276906.1 COG0590, CumB, Cytosine/adenosine deaminases YP_003276907.1 COG2351, Transthyretin-like protein YP_003276908.1 COG2351, Transthyretin-like protein YP_003276909.1 COG2271, UhpC, Sugar phosphate permease YP_003276910.1 COG0583, LysR, Transcriptional regulator YP_003276911.1 COG3195, Uncharacterized protein conserved in bacteria YP_003276912.1 COG3781, Predicted membrane protein YP_003276913.1 COG0590, CumB, Cytosine/adenosine deaminases YP_003276914.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003276915.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003276916.1 COG3132, Uncharacterized protein conserved in bacteria YP_003276917.1 COG0299, PurN, Folate-dependent phosphoribosylglycinamideformyltransferase PurN YP_003276918.1 COG4728, Uncharacterized protein conserved in bacteria YP_003276919.1 COG0144, Sun, tRNA and rRNA cytosine-C5-methylases YP_003276920.1 COG1398, OLE1, Fatty-acid desaturase YP_003276922.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003276923.1 COG3835, CdaR, Sugar diacid utilization regulator YP_003276924.1 COG0267, RpmG, Ribosomal protein L33 YP_003276925.1 COG0227, RpmB, Ribosomal protein L28 YP_003276926.1 COG0492, TrxB, Thioredoxin reductase YP_003276927.1 COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_003276928.1 COG2834, LolA, Outer membrane lipoprotein-sorting protein YP_003276929.1 COG1114, BrnQ, Branched-chain amino acid permeases YP_003276930.1 similar to mitochondrial transporter ATM1 precursor; COG2256, MGS1, ATPase related to the helicase subunit of theHolliday junction resolvase YP_003276931.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003276932.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003276933.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003276934.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003276935.1 COG1392, Phosphate transport regulator (distant homolog ofPhoU) YP_003276936.1 COG0306, PitA, Phosphate/sulphate permeases YP_003276937.1 COG2200, Rtn, FOG: EAL domain YP_003276938.1 COG2314, XynA, Predicted membrane protein YP_003276939.1 COG0228, RpsP, Ribosomal protein S16 YP_003276940.1 COG0806, RimM, RimM protein YP_003276941.1 COG0336, TrmD, tRNA-(guanine-N1)-methyltransferase YP_003276942.1 COG0335, RplS, Ribosomal protein L19 YP_003276943.1 COG0494, MutT, NTP pyrophosphohydrolases including oxidative damagerepair enzymes YP_003276944.1 COG1270, CbiB, Cobalamin biosynthesis protein CobD/CbiB YP_003276945.1 COG0741, MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003276946.1 COG1162, Predicted GTPases YP_003276947.1 COG2154, Pterin-4a-carbinolamine dehydratase YP_003276948.1 COG0501, HtpX, Zn-dependent protease with chaperone function YP_003276949.1 COG1949, Orn, Oligoribonuclease (3'->5' exoribonuclease) YP_003276950.1 COG0513, SrmB, Superfamily II DNA and RNA helicases YP_003276951.1 COG2814, AraJ, Arabinose efflux permease YP_003276952.1 COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003276953.1 COG0516, GuaB, IMP dehydrogenase/GMP reductase YP_003276954.1 COG1309, AcrR, Transcriptional regulator YP_003276955.1 COG1538, TolC, Outer membrane protein YP_003276956.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003276957.1 COG2814, AraJ, Arabinose efflux permease YP_003276958.1 COG0210, UvrD, Superfamily I DNA and RNA helicases YP_003276959.1 COG3211, PhoX, Predicted phosphatase YP_003276960.1 COG1297, Predicted membrane protein YP_003276961.1 COG2334, Putative homoserine kinase type II (proteinkinase fold) YP_003276962.1 COG3487, IrpA, Uncharacterized iron-regulated protein YP_003276963.1 COG0749, PolA, DNA polymerase I - 3'-5' exonuclease and polymerasedomains YP_003276964.1 COG1296, AzlC, Predicted branched-chain amino acid permease(azaleucine resistance) YP_003276965.1 COG4392, Predicted membrane protein YP_003276966.1 COG0412, Dienelactone hydrolase and related enzymes YP_003276967.1 COG0428, Predicted divalent heavy-metal cationstransporter YP_003276968.1 COG3279, LytT, Response regulator of the LytR/AlgR family YP_003276969.1 COG2972, Predicted signal transduction protein with aC-terminal ATPase domain YP_003276970.1 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily YP_003276971.1 COG0165, ArgH, Argininosuccinate lyase YP_003276972.1 COG3181, Uncharacterized protein conserved in bacteria YP_003276973.1 COG2373, Large extracellular alpha-helical protein YP_003276974.1 COG3839, MalK, ABC-type sugar transport systems YP_003276975.1 COG1653, UgpB, ABC-type sugar transport system YP_003276976.1 similar to MsmF of Lactobacillus acidophilus; COG1175, UgpA, ABC-type sugar transport systems YP_003276977.1 COG0395, UgpE, ABC-type sugar transport system YP_003276978.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003276979.1 COG3568, ElsH, Metal-dependent hydrolase YP_003276980.1 COG3247, HdeD, Uncharacterized conserved protein YP_003276981.1 COG4953, PbpC, Membrane carboxypeptidase/penicillin-binding proteinPbpC YP_003276982.1 COG0583, LysR, Transcriptional regulator YP_003276983.1 COG0778, NfnB, Nitroreductase YP_003276984.1 COG5006, Predicted permease YP_003276985.1 COG1304, LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_003276986.1 COG2186, FadR, Transcriptional regulators YP_003276987.1 COG1620, LldP, L-lactate permease YP_003276988.1 COG1620, LldP, L-lactate permease YP_003276989.1 COG1620, LldP, L-lactate permease YP_003276990.1 COG1304, LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_003276991.1 COG3004, NhaA, Na+/H+ antiporter YP_003276992.1 COG2510, Predicted membrane protein YP_003276993.1 COG1113, AnsP, Gamma-aminobutyrate permease and related permeases YP_003276994.1 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) YP_003276995.1 COG0833, LysP, Amino acid transporters YP_003276996.1 COG0389, DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003276997.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003276998.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003276999.1 COG2904, Uncharacterized protein conserved in bacteria YP_003277000.1 COG3751, EGL-9, Predicted proline hydroxylase YP_003277001.1 COG3022, Uncharacterized protein conserved in bacteria YP_003277002.1 COG1530, CafA, Ribonucleases G and E YP_003277003.1 COG0564, RluA, Pseudouridylate synthases YP_003277004.1 COG0546, Gph, Predicted phosphatases YP_003277005.1 COG2146 YP_003277006.1 COG0616, SppA, Periplasmic serine proteases (ClpP class) YP_003277007.1 COG0313, Predicted methyltransferases YP_003277008.1 COG0424, Maf, Nucleotide-binding protein implicated in inhibitionof septum formation YP_003277009.1 COG1399, Predicted metal-binding YP_003277010.1 COG0333, RpmF, Ribosomal protein L32 YP_003277011.1 COG0416, PlsX, Fatty acid/phospholipid biosynthesis enzyme YP_003277013.1 COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase YP_003277014.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277015.1 COG0236, AcpP, Acyl carrier protein YP_003277016.1 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase YP_003277017.1 COG1981, Predicted membrane protein YP_003277018.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003277019.1 COG3073, RseA, Negative regulator of sigma E activity YP_003277020.1 COG0265, DegQ, Trypsin-like serine proteases YP_003277021.1 COG0481, LepA, Membrane GTPase LepA YP_003277022.1 COG0681, LepB, Signal peptidase I YP_003277023.1 COG4970, FimT, Tfp pilus assembly protein FimT YP_003277024.1 COG0571, Rnc, dsRNA-specific ribonuclease YP_003277025.1 COG1159, Era, GTPase YP_003277026.1 COG0854, PdxJ, Pyridoxal phosphate biosynthesis protein YP_003277027.1 COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) YP_003277028.1 COG1472, BglX, Beta-glucosidase-related glycosidases YP_003277029.1 COG4178, ABC-type uncharacterized transport system YP_003277030.1 COG0205, PfkA, 6-phosphofructokinase YP_003277031.1 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) YP_003277032.1 COG2704, DcuB, Anaerobic C4-dicarboxylate transporter YP_003277033.1 COG0027, PurT, Formate-dependent phosphoribosylglycinamideformyltransferase (GAR transformylase) YP_003277034.1 COG0668, MscS, Small-conductance mechanosensitive channel YP_003277035.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003277036.1 COG4589, Predicted CDP-diglyceridesynthetase/phosphatidate cytidylyltransferase YP_003277037.1 COG1190, LysU, Lysyl-tRNA synthetase (class II) YP_003277038.1 COG2802, Uncharacterized protein YP_003277039.1 COG0762, Predicted integral membrane protein YP_003277040.1 COG0777, AccD, Acetyl-CoA carboxylase beta subunit YP_003277041.1 COG0159, TrpA, Tryptophan synthase alpha chain YP_003277042.1 COG0133, TrpB, Tryptophan synthase beta chain YP_003277043.1 COG0135, TrpF, Phosphoribosylanthranilate isomerase YP_003277044.1 COG0101, TruA, Pseudouridylate synthase YP_003277045.1 COG3170, FimV, Tfp pilus assembly protein FimV YP_003277046.1 COG0136, Asd, Aspartate-semialdehyde dehydrogenase YP_003277047.1 COG0473, LeuB, Isocitrate/isopropylmalate dehydrogenase YP_003277048.1 COG0066, LeuD, 3-isopropylmalate dehydratase small subunit YP_003277049.1 COG0065, LeuC, 3-isopropylmalate dehydratase large subunit YP_003277050.1 COG0583, LysR, Transcriptional regulator YP_003277051.1 COG0790, FOG: TPR repeat YP_003277052.1 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Znfinger domain YP_003277053.1 COG0443, DnaK, Molecular chaperone YP_003277054.1 COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) YP_003277055.1 COG0360, RpsF, Ribosomal protein S6 YP_003277056.1 COG2965, PriB, Primosomal replication protein N YP_003277057.1 COG0238, RpsR, Ribosomal protein S18 YP_003277058.1 COG0359, RplI, Ribosomal protein L9 YP_003277059.1 COG0305, DnaB, Replicative DNA helicase YP_003277060.1 COG3264, Small-conductance mechanosensitive channel YP_003277061.1 COG1875, Predicted ATPase related to phosphatestarvation-inducible protein PhoH YP_003277062.1 COG1225, Bcp, Peroxiredoxin YP_003277063.1 COG3737, Uncharacterized conserved protein YP_003277064.1 COG0436, Aspartate/tyrosine/aromatic aminotransferase YP_003277065.1 COG0460, ThrA, Homoserine dehydrogenase YP_003277066.1 COG4907, Predicted membrane protein YP_003277067.1 COG0498, ThrC, Threonine synthase YP_003277068.1 COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesisprotein YP_003277069.1 COG0303, MoeA, Molybdopterin biosynthesis enzyme YP_003277070.1 COG1977, MoaD, Molybdopterin converting factor YP_003277071.1 COG2031, AtoE, Short chain fatty acids transporter YP_003277072.1 COG0561, Cof, Predicted hydrolases of the HAD superfamily YP_003277073.1 COG2814, AraJ, Arabinose efflux permease YP_003277074.1 COG1309, AcrR, Transcriptional regulator YP_003277075.1 COG3839, MalK, ABC-type sugar transport systems YP_003277076.1 COG1174, OpuBB, ABC-type proline/glycine betaine transport systems YP_003277077.1 COG1429, CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases YP_003277078.1 COG3495, Uncharacterized protein conserved in bacteria YP_003277079.1 COG0314, MoaE, Molybdopterin converting factor YP_003277080.1 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily YP_003277081.1 COG4977, Transcriptional regulator containing an amidasedomain and an AraC-type DNA-binding HTH domain YP_003277082.1 COG0542, ClpA, ATPases with chaperone activity YP_003277083.1 COG1005, NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_003277084.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003277085.1 COG0456, RimI, Acetyltransferases YP_003277086.1 COG2890, HemK, Methylase of polypeptide chain release factors YP_003277087.1 COG3096, MukB, Uncharacterized protein involved in chromosomepartitioning YP_003277088.1 COG0042, tRNA-dihydrouridine synthase YP_003277089.1 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003277090.1 COG1985, RibD, Pyrimidine reductase YP_003277091.1 COG4968, PilE, Tfp pilus assembly protein PilE YP_003277092.1 COG3419, PilY1, Tfp pilus assembly protein YP_003277093.1 COG4726, PilX, Tfp pilus assembly protein PilX YP_003277094.1 COG4966, PilW, Tfp pilus assembly protein PilW YP_003277095.1 COG4967, PilV, Tfp pilus assembly protein PilV YP_003277096.1 COG4970, FimT, Tfp pilus assembly protein FimT YP_003277097.1 COG4970, FimT, Tfp pilus assembly protein FimT YP_003277098.1 COG0184, RpsO, Ribosomal protein S15P/S13E YP_003277099.1 COG1185, Pnp, Polyribonucleotide nucleotidyltransferase(polynucleotide phosphorylase) YP_003277100.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003277101.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003277102.1 COG0149, TpiA, Triosephosphate isomerase YP_003277103.1 COG1314, SecG, Preprotein translocase subunit SecG YP_003277104.1 COG0838, NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_003277105.1 COG0377, NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit andrelated Fe-S oxidoreductases YP_003277106.1 COG0852, NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit YP_003277107.1 COG0649, NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_003277108.1 COG1905, NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit YP_003277109.1 COG1894, NuoF, NADH:ubiquinone oxidoreductase YP_003277110.1 COG1034, NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75kD subunit (chain G) YP_003277111.1 COG1005, NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_003277112.1 COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinoneoxidoreductase 23 kD subunit (chain I) YP_003277113.1 COG0839, NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_003277114.1 COG0713, NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L(chain K) YP_003277115.1 COG1009, NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chainL)/Multisubunit Na+/H+ antiporter YP_003277116.1 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_003277117.1 COG1007, NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_003277119.1 COG5319, Uncharacterized protein conserved in bacteria YP_003277120.1 COG5662, Predicted transmembrane transcriptional regulator(anti-sigma factor) YP_003277121.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003277122.1 COG4315, Uncharacterized protein conserved in bacteria YP_003277123.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003277124.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003277125.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003277126.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003277127.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003277128.1 COG4993, Gcd, Glucose dehydrogenase YP_003277129.1 COG1309, AcrR, Transcriptional regulator YP_003277130.1 COG5621, Predicted secreted hydrolase YP_003277131.1 COG2764, PhnB, Uncharacterized protein conserved in bacteria YP_003277132.1 COG4591, LolE, ABC-type transport system YP_003277133.1 COG1136, SalX, ABC-type antimicrobial peptide transport system YP_003277134.1 COG0324, MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase YP_003277135.1 COG3119, AslA, Arylsulfatase A and related enzymes YP_003277136.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277137.1 COG2814, AraJ, Arabinose efflux permease YP_003277138.1 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_003277139.1 COG1803, MgsA, Methylglyoxal synthase YP_003277140.1 COG0578, GlpA, Glycerol-3-phosphate dehydrogenase YP_003277141.1 COG0662 YP_003277142.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277143.1 COG0474, MgtA, Cation transport ATPase YP_003277144.1 COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase YP_003277145.1 COG2814, AraJ, Arabinose efflux permease YP_003277146.1 COG4126, Hydantoin racemase YP_003277147.1 COG1737, RpiR, Transcriptional regulators YP_003277148.1 COG0323, MutL, DNA mismatch repair enzyme (predicted ATPase) YP_003277149.1 COG3134, Predicted outer membrane lipoprotein YP_003277150.1 COG0586, DedA, Uncharacterized membrane-associated protein YP_003277151.1 COG3134, Predicted outer membrane lipoprotein YP_003277152.1 COG0860, AmiC, N-acetylmuramoyl-L-alanine amidase YP_003277153.1 COG0802, Predicted ATPase or kinase YP_003277154.1 COG1600, Uncharacterized Fe-S protein YP_003277155.1 COG0679, Predicted permeases YP_003277156.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277157.1 COG2902, NAD-specific glutamate dehydrogenase YP_003277158.1 COG5422, ROM1, RhoGEF YP_003277159.1 COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase(contains nucleotidyltransferase and I-patchacetyltransferase domains) YP_003277160.1 COG4974, XerD, Site-specific recombinase XerD YP_003277161.1 COG3915, Uncharacterized protein conserved in bacteria YP_003277162.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277163.1 COG3434, Predicted signal transduction protein containingEAL and modified HD-GYP domains YP_003277164.1 COG3434, Predicted signal transduction protein containingEAL and modified HD-GYP domains YP_003277165.1 COG2833, Uncharacterized protein conserved in bacteria YP_003277166.1 COG0663, PaaY, Carbonic anhydrases/acetyltransferases YP_003277167.1 COG1281, Disulfide bond chaperones of the HSP33 family YP_003277168.1 COG4564, Signal transduction histidine kinase YP_003277169.1 COG2919, Septum formation initiator YP_003277170.1 COG0148, Eno, Enolase YP_003277171.1 COG2877, KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphatesynthase YP_003277172.1 COG0504, PyrG, CTP synthase (UTP-ammonia lyase) YP_003277173.1 COG0452, Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase YP_003277174.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003277175.1 COG0756, Dut, dUTPase YP_003277176.1 COG1512, Beta-propeller domains of methanol dehydrogenasetype YP_003277177.1 COG0642, BaeS, Signal transduction histidine kinase YP_003277178.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003277179.1 COG3212, Predicted membrane protein YP_003277180.1 COG4139, BtuC, ABC-type cobalamin transport system YP_003277181.1 COG3134, Predicted outer membrane lipoprotein YP_003277182.1 COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_003277183.1 COG3416, Uncharacterized protein conserved in bacteria YP_003277184.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003277185.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003277186.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003277187.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003277188.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003277189.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003277190.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003277191.1 COG0277, GlcD, FAD/FMN-containing dehydrogenases YP_003277192.1 COG3808, OVP1, Inorganic pyrophosphatase YP_003277193.1 COG2010, CccA, Cytochrome c YP_003277194.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003277196.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003277197.1 COG2850, Uncharacterized conserved protein YP_003277198.1 COG1322, Uncharacterized protein conserved in bacteria YP_003277199.1 COG3317, NlpB, Uncharacterized lipoprotein YP_003277200.1 COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminatelyase YP_003277201.1 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_003277202.1 COG0500, SmtA, SAM-dependent methyltransferases YP_003277203.1 COG0300, DltE, Short-chain dehydrogenases of various substratespecificities YP_003277204.1 COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism YP_003277205.1 COG2814, AraJ, Arabinose efflux permease YP_003277206.1 COG0187, GyrB, Type IIA topoisomerase (DNA gyrase/topo II YP_003277207.1 COG0741, MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003277208.1 COG0188, GyrA, Type IIA topoisomerase (DNA gyrase/topo II YP_003277209.1 COG0583, LysR, Transcriptional regulator YP_003277210.1 COG4125, Predicted membrane protein YP_003277211.1 COG2814, AraJ, Arabinose efflux permease YP_003277212.1 COG2240, PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase YP_003277213.1 COG0251, TdcF, Putative translation initiation inhibitor YP_003277214.1 COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamasesuperfamily) YP_003277215.1 COG2308, Uncharacterized conserved protein YP_003277216.1 COG2307, Uncharacterized protein conserved in bacteria YP_003277217.1 COG2193, Bfr, Bacterioferritin (cytochrome b1) YP_003277218.1 COG0450, AhpC, Peroxiredoxin YP_003277219.1 COG3634, AhpF, Alkyl hydroperoxide reductase YP_003277220.1 COG1629, CirA, Outer membrane receptor proteins YP_003277221.1 COG0209, NrdA, Ribonucleotide reductase YP_003277222.1 COG3720, HemS, Putative heme degradation protein YP_003277223.1 COG4558, ChuT, ABC-type hemin transport system YP_003277224.1 COG0609, FepD, ABC-type Fe3+-siderophore transport system YP_003277225.1 COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transportsystems YP_003277227.1 COG0583, LysR, Transcriptional regulator YP_003277228.1 COG1806, Uncharacterized protein conserved in bacteria YP_003277229.1 COG0574, PpsA, Phosphoenolpyruvate synthase/pyruvate phosphatedikinase YP_003277230.1 COG4327, Predicted membrane protein YP_003277231.1 COG4147, DhlC, Predicted symporter YP_003277233.1 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_003277234.1 COG1733, Predicted transcriptional regulators YP_003277235.1 COG1893, ApbA, Ketopantoate reductase YP_003277236.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277237.1 COG0568, RpoD, DNA-directed RNA polymerase YP_003277238.1 COG0358, DnaG, DNA primase (bacterial type) YP_003277239.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277240.1 COG2908, Uncharacterized protein conserved in bacteria YP_003277241.1 COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) -cyclophilin family YP_003277242.1 COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) -cyclophilin family YP_003277243.1 COG4783, Putative Zn-dependent protease YP_003277244.1 COG0215, CysS, Cysteinyl-tRNA synthetase YP_003277245.1 COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNAglycosylase YP_003277246.1 COG0825, AccA, Acetyl-CoA carboxylase alpha subunit YP_003277247.1 COG0037, MesJ, Predicted ATPase of the PP-loop superfamilyimplicated in cell cycle control YP_003277248.1 COG0527, LysC, Aspartokinases YP_003277249.1 COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase andrelated pseudouridylate synthases YP_003277250.1 COG1864, NUC1, DNA/RNA endonuclease G YP_003277251.1 COG0141, HisD, Histidinol dehydrogenase YP_003277252.1 COG1188, Ribosome-associated heat shock protein implicatedin the recycling of the 50S subunit (S4 paralog) YP_003277253.1 COG0642, BaeS, Signal transduction histidine kinase YP_003277254.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003277255.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277256.1 COG4214, XylH, ABC-type xylose transport system YP_003277257.1 COG3333, Uncharacterized protein conserved in bacteria YP_003277258.1 COG3829, RocR, Transcriptional regulator containing PAS YP_003277259.1 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_003277260.1 COG2159, Predicted metal-dependent hydrolase of theTIM-barrel fold YP_003277261.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003277262.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003277263.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003277264.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003277265.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003277266.1 COG1073, Hydrolases of the alpha/beta superfamily YP_003277267.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003277268.1 COG0586, DedA, Uncharacterized membrane-associated protein YP_003277269.1 COG2269, Truncated YP_003277270.1 COG2391, Predicted transporter component YP_003277271.1 COG2897, SseA, Rhodanese-related sulfurtransferase YP_003277272.1 COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase YP_003277273.1 COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase YP_003277274.1 COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase YP_003277275.1 COG0590, CumB, Cytosine/adenosine deaminases YP_003277276.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003277277.1 COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003277278.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003277279.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003277280.1 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases YP_003277281.1 COG0583, LysR, Transcriptional regulator YP_003277282.1 COG0276, HemH, Protoheme ferro-lyase (ferrochelatase) YP_003277283.1 COG1011, Predicted hydrolase (HAD superfamily) YP_003277284.1 COG5473, Predicted integral membrane protein YP_003277286.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277287.1 COG3349, Uncharacterized conserved protein YP_003277288.1 COG1562, ERG9, Phytoene/squalene synthetase YP_003277289.1 COG1562, ERG9, Phytoene/squalene synthetase YP_003277290.1 COG0845, AcrA, Membrane-fusion protein YP_003277291.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003277292.1 COG0544, Tig, FKBP-type peptidyl-prolyl cis-trans isomerase(trigger factor) YP_003277293.1 COG0740, ClpP, Protease subunit of ATP-dependent Clp proteases YP_003277294.1 COG1219, ClpX, ATP-dependent protease Clp YP_003277295.1 COG0466, Lon, ATP-dependent Lon protease YP_003277296.1 COG0620, MetE, Methionine synthase II (cobalamin-independent) YP_003277297.1 COG0583, LysR, Transcriptional regulator YP_003277298.1 COG2814, AraJ, Arabinose efflux permease YP_003277299.1 COG1309, AcrR, Transcriptional regulator YP_003277300.1 COG4977, Transcriptional regulator containing an amidasedomain and an AraC-type DNA-binding HTH domain YP_003277301.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003277302.1 COG2513, PrpB, PEP phosphonomutase and related enzymes YP_003277303.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277304.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277305.1 COG3829, RocR, Transcriptional regulator containing PAS YP_003277306.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003277307.1 COG2828, Uncharacterized protein conserved in bacteria YP_003277308.1 COG1514, LigT, 2'-5' RNA ligase YP_003277309.1 COG1048, AcnA, Aconitase A YP_003277310.1 COG1802, GntR, Transcriptional regulators YP_003277311.1 COG0372, GltA, Citrate synthase YP_003277312.1 COG3800, Predicted transcriptional regulator YP_003277313.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277314.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277315.1 COG4122, Predicted O-methyltransferase YP_003277316.1 COG1902, NemA, NADH:flavin oxidoreductases YP_003277317.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003277318.1 COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase YP_003277319.1 COG2057, AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase YP_003277320.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003277321.1 COG2070, Dioxygenases related to 2-nitropropanedioxygenase YP_003277322.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003277323.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277324.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277325.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003277326.1 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunitand related amidases YP_003277327.1 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunitand related amidases YP_003277328.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277329.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277330.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277331.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277333.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003277334.1 COG2771, CsgD, DNA-binding HTH domain-containing proteins YP_003277335.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003277336.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003277337.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277338.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003277339.1 COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase YP_003277340.1 COG2303, BetA, Choline dehydrogenase and related flavoproteins YP_003277341.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277342.1 COG2814, AraJ, Arabinose efflux permease YP_003277343.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277345.1 COG3653, N-acyl-D-aspartate/D-glutamate deacylase YP_003277346.1 COG2814, AraJ, Arabinose efflux permease YP_003277347.1 COG2181, NarI, Nitrate reductase gamma subunit YP_003277348.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003277349.1 COG4221, Short-chain alcohol dehydrogenase of unknownspecificity YP_003277350.1 COG2271, UhpC, Sugar phosphate permease YP_003277351.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003277352.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277353.1 COG0583, LysR, Transcriptional regulator YP_003277354.1 COG3531, Predicted protein-disulfide isomerase YP_003277355.1 COG0491, GloB, Zn-dependent hydrolases YP_003277356.1 COG3631, Ketosteroid isomerase-related protein YP_003277357.1 COG2514, Predicted ring-cleavage extradiol dioxygenase YP_003277358.1 COG3570, StrB, Streptomycin 6-kinase YP_003277359.1 COG2182, MalE, Maltose-binding periplasmic proteins/domains YP_003277360.1 COG0456, RimI, Acetyltransferases YP_003277361.1 COG3575, Uncharacterized protein conserved in bacteria YP_003277362.1 COG1902, NemA, NADH:flavin oxidoreductases YP_003277363.1 COG1902, NemA, NADH:flavin oxidoreductases YP_003277364.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277365.1 COG4538, Uncharacterized conserved protein YP_003277366.1 COG0782, GreA, Kelongation factor YP_003277367.1 COG0456, RimI, Acetyltransferases YP_003277368.1 COG0583, LysR, Transcriptional regulator YP_003277369.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277370.1 COG3791, Uncharacterized conserved protein YP_003277371.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003277372.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277373.1 COG1545, Predicted nucleic-acid-binding protein containinga Zn-ribbon YP_003277374.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277376.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003277377.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277378.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277379.1 COG0491, GloB, Zn-dependent hydrolases YP_003277380.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277381.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277382.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277383.1 COG3026, RseB, Negative regulator of sigma E activity YP_003277384.1 COG4542, PduX, Protein involved in propanediol utilization YP_003277385.1 COG0412, Dienelactone hydrolase and related enzymes YP_003277386.1 COG5517, Small subunit of phenylpropionate dioxygenase YP_003277387.1 COG1033, Predicted exporters of the RND superfamily YP_003277388.1 COG4447, Uncharacterized protein related to plantphotosystem II stability/assembly factor YP_003277389.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003277391.1 COG2995, PqiA, Uncharacterized paraquat-inducible protein A YP_003277392.1 COG4774, Fiu, Outer membrane receptor for monomeric catechols YP_003277393.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003277394.1 COG4569, MhpF, Acetaldehyde dehydrogenase (acetylating) YP_003277395.1 COG3971, 2-keto-4-pentenoate hydratase YP_003277396.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003277397.1 COG1853, Conserved protein/domain typically associatedwith flavoprotein oxygenases YP_003277398.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277399.1 COG1053, SdhA, Succinate dehydrogenase/fumarate reductase YP_003277400.1 COG1053, SdhA, Succinate dehydrogenase/fumarate reductase YP_003277401.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003277402.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277403.1 COG4548, NorD, Nitric oxide reductase activation protein YP_003277404.1 COG1451, Predicted metal-dependent hydrolase YP_003277405.1 COG0796, MurI, Glutamate racemase YP_003277406.1 COG4664, FcbT3, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003277407.1 COG0728, MviN, Uncharacterized membrane protein YP_003277408.1 COG1246, ArgA, N-acetylglutamate synthase and related acetyltransferases YP_003277409.1 COG1009, NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chainL)/Multisubunit Na+/H+ antiporter YP_003277410.1 COG1006, MnhC, Multisubunit Na+/H+ antiporter YP_003277411.1 COG0651, HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+antiporter YP_003277412.1 COG1863, MnhE, Multisubunit Na+/H+ antiporter YP_003277413.1 COG2212, MnhF, Multisubunit Na+/H+ antiporter YP_003277414.1 COG1320, MnhG, Multisubunit Na+/H+ antiporter YP_003277415.1 COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation YP_003277416.1 COG1611, Predicted Rossmann fold nucleotide-bindingprotein YP_003277417.1 COG4899, Uncharacterized protein conserved in bacteria YP_003277418.1 COG0500, SmtA, SAM-dependent methyltransferases YP_003277419.1 COG0448, GlgC, ADP-glucose pyrophosphorylase YP_003277420.1 COG4564, Signal transduction histidine kinase YP_003277421.1 COG3153, Predicted acetyltransferase YP_003277422.1 COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumaratehydratase class I YP_003277423.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003277424.1 COG0114, FumC, Fumarase YP_003277425.1 COG4318, Uncharacterized protein conserved in bacteria YP_003277426.1 COG0659, SUL1, Sulfate permease and related transporters (MFSsuperfamily) YP_003277427.1 COG4282, SMI1, Protein involved in beta-1 YP_003277428.1 COG2814, AraJ, Arabinose efflux permease YP_003277429.1 COG1846, MarR, Transcriptional regulators YP_003277430.1 COG4993, Gcd, Glucose dehydrogenase YP_003277431.1 COG1284, Uncharacterized conserved protein YP_003277433.1 COG2113, ProX, ABC-type proline/glycine betaine transport systems YP_003277434.1 COG2113, ProX, ABC-type proline/glycine betaine transport systems YP_003277435.1 COG2113, ProX, ABC-type proline/glycine betaine transport systems YP_003277436.1 COG4176, ProW, ABC-type proline/glycine betaine transport system YP_003277437.1 COG4175, ProV, ABC-type proline/glycine betaine transport system YP_003277438.1 COG2862, Predicted membrane protein YP_003277439.1 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_003277440.1 COG0591, PutP, Na+/proline symporter YP_003277441.1 COG0137, ArgG, Argininosuccinate synthase YP_003277442.1 COG3123, Uncharacterized protein conserved in bacteria YP_003277443.1 COG3134, Predicted outer membrane lipoprotein YP_003277444.1 COG1393, ArsC, Arsenate reductase and related proteins YP_003277445.1 COG0285, FolC, Folylpolyglutamate synthase YP_003277446.1 COG3087, FtsN, Cell division protein YP_003277447.1 COG1286, CvpA, Uncharacterized membrane protein YP_003277448.1 COG0034, PurF, Glutamine phosphoribosylpyrophosphateamidotransferase YP_003277449.1 COG0626, MetC, Cystathionine beta-lyases/cystathioninegamma-synthases YP_003277450.1 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synthetases YP_003277451.1 COG1294, AppB, Cytochrome bd-type quinol oxidase YP_003277452.1 COG1538, TolC, Outer membrane protein YP_003277453.1 COG0845, AcrA, Membrane-fusion protein YP_003277454.1 COG3696, Putative silver efflux pump YP_003277455.1 COG0347, GlnK, Nitrogen regulatory protein PII YP_003277456.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277457.1 COG5490, Uncharacterized conserved protein YP_003277458.1 COG0824, FcbC, Predicted thioesterase YP_003277459.1 COG1488, PncB, Nicotinic acid phosphoribosyltransferase YP_003277460.1 COG1055, ArsB, Na+/H+ antiporter NhaD and related arsenitepermeases YP_003277461.1 COG1052, LdhA, Lactate dehydrogenase and related dehydrogenases YP_003277462.1 COG1942, Uncharacterized protein YP_003277463.1 COG1322, Uncharacterized protein conserved in bacteria YP_003277464.1 COG2814, AraJ, Arabinose efflux permease YP_003277465.1 COG2956, Predicted N-acetylglucosaminyl transferase YP_003277466.1 COG5416, Uncharacterized integral membrane protein YP_003277467.1 COG0776, HimA, Bacterial nucleoid DNA-binding protein YP_003277468.1 COG0539, RpsA, Ribosomal protein S1 YP_003277469.1 COG0128, AroA, 5-enolpyruvylshikimate-3-phosphate synthase YP_003277470.1 COG0287, TyrA, Prephenate dehydrogenase YP_003277471.1 COG0077, PheA, Prephenate dehydratase YP_003277472.1 COG1932, SerC, Phosphoserine aminotransferase YP_003277473.1 COG0188, GyrA, Type IIA topoisomerase (DNA gyrase/topo II YP_003277474.1 COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_003277475.1 COG2227, UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 YP_003277476.1 COG0546, Gph, Predicted phosphatases YP_003277477.1 COG4974, XerD, Site-specific recombinase XerD YP_003277478.1 COG5257, GCD11, Translation initiation factor 2 YP_003277479.1 COG2452, Predicted site-specific integrase-resolvase YP_003277480.1 COG3072, CyaA, Adenylate cyclase YP_003277481.1 COG4933, Uncharacterized conserved protein YP_003277482.1 COG0725, ModA, ABC-type molybdate transport system YP_003277483.1 COG0178, UvrA, Excinuclease ATPase subunit YP_003277484.1 COG2199, FOG: GGDEF domain YP_003277485.1 COG4253, Uncharacterized protein conserved in bacteria YP_003277486.1 COG2974, RdgC, DNA recombination-dependent growth factor C YP_003277487.1 COG0056, AtpA, F0F1-type ATP synthase YP_003277488.1 COG1056, NadR, Nicotinamide mononucleotide adenylyltransferase YP_003277489.1 COG5518, Bacteriophage capsid portal protein YP_003277490.1 COG2842, Uncharacterized ATPase YP_003277491.1 COG1396, HipB, Predicted transcriptional regulators YP_003277492.1 COG2008, GLY1, Threonine aldolase YP_003277493.1 COG3646, Uncharacterized phage-encoded protein YP_003277494.1 COG1441, MenC, O-succinylbenzoate synthase YP_003277496.1 COG0846, SIR2, NAD-dependent protein deacetylases YP_003277498.1 COG0330, HflC, Membrane protease subunits YP_003277499.1 COG4913, Uncharacterized protein conserved in bacteria YP_003277500.1 COG3403, Uncharacterized conserved protein YP_003277501.1 COG4981, Enoyl reductase domain of yeast-type FAS1 YP_003277502.1 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase YP_003277504.1 COG2884, FtsE, Predicted ATPase involved in cell division YP_003277505.1 COG1884, Sbm, Methylmalonyl-CoA mutase YP_003277506.1 COG1926, Predicted phosphoribosyltransferases YP_003277508.1 COG4928, Predicted P-loop ATPase YP_003277509.1 COG2840, Uncharacterized protein conserved in bacteria YP_003277510.1 COG3311, AlpA, Predicted transcriptional regulator YP_003277511.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003277512.1 COG3846, TrbL, Type IV secretory pathway YP_003277513.1 COG5665, NOT5, CCR4-NOT transcriptional regulation complex YP_003277514.1 COG2217, ZntA, Cation transport ATPase YP_003277515.1 COG0582, XerC, Integrase YP_003277516.1 COG3918, Predicted membrane protein YP_003277517.1 COG3390, Uncharacterized protein conserved in archaea YP_003277518.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003277519.1 COG3203, OmpC, Outer membrane protein (porin) YP_003277520.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277521.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277522.1 COG3293, Transposase and inactivated derivatives YP_003277523.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003277524.1 COG2703, Hemerythrin YP_003277525.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003277526.1 COG2271, UhpC, Sugar phosphate permease YP_003277527.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003277528.1 COG1846, MarR, Transcriptional regulators YP_003277529.1 COG0673, MviM, Predicted dehydrogenases and related proteins YP_003277530.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003277531.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003277532.1 COG3547, Transposase and inactivated derivatives YP_003277533.1 COG1414, IclR, Transcriptional regulator YP_003277534.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277535.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003277536.1 COG5517, Small subunit of phenylpropionate dioxygenase YP_003277537.1 COG1995, PdxA, Pyridoxal phosphate biosynthesis protein YP_003277538.1 COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_003277539.1 COG2706, 3-carboxymuconate cyclase YP_003277540.1 COG1414, IclR, Transcriptional regulator YP_003277541.1 COG3293, Transposase and inactivated derivatives YP_003277542.1 COG5257, GCD11, Translation initiation factor 2 YP_003277543.1 COG1396, HipB, Predicted transcriptional regulators YP_003277544.1 COG0155, CysI, Sulfite reductase YP_003277545.1 COG5377, Phage-related protein YP_003277546.1 COG4660, RnfE, Predicted NADH:ubiquinone oxidoreductase YP_003277547.1 COG3311, AlpA, Predicted transcriptional regulator YP_003277548.1 COG1900, Uncharacterized conserved protein YP_003277549.1 COG2604, Uncharacterized protein conserved in bacteria YP_003277551.1 COG0286, HsdM, Type I restriction-modification systemmethyltransferase subunit YP_003277552.1 COG0286, HsdM, Type I restriction-modification systemmethyltransferase subunit YP_003277553.1 COG0013, AlaS, Alanyl-tRNA synthetase YP_003277554.1 COG1528, Ftn, Ferritin-like protein YP_003277555.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003277556.1 COG3614, Predicted periplasmic ligand-binding sensordomain YP_003277557.1 COG0474, MgtA, Cation transport ATPase YP_003277558.1 COG3547, Transposase and inactivated derivatives YP_003277559.1 COG3293, Transposase and inactivated derivatives YP_003277560.1 COG3002, Uncharacterized protein conserved in bacteria YP_003277561.1 COG1484, DnaC, DNA replication protein YP_003277562.1 COG2199, FOG: GGDEF domain YP_003277563.1 COG5293, Uncharacterized protein conserved in bacteria YP_003277565.1 COG4637, Predicted ATPase YP_003277566.1 COG4453, Uncharacterized protein conserved in bacteria YP_003277567.1 COG0286, HsdM, Type I restriction-modification systemmethyltransferase subunit YP_003277568.1 COG1030, NfeD, Membrane-bound serine protease (ClpP class) YP_003277569.1 COG0732, HsdS, Restriction endonuclease S subunits YP_003277570.1 COG0610, Type I site-specific restriction-modificationsystem YP_003277571.1 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain YP_003277572.1 COG3039, Transposase and inactivated derivatives YP_003277573.1 COG2272, PnbA, Carboxylesterase type B YP_003277574.1 COG4974, XerD, Site-specific recombinase XerD YP_003277575.1 COG5257, GCD11, Translation initiation factor 2 YP_003277576.1 COG4714, Uncharacterized membrane-anchored proteinconserved in bacteria YP_003277577.1 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A(vWA) domain YP_003277578.1 COG1330, RecC, Exonuclease V gamma subunit YP_003277579.1 COG4257, Vgb, Streptogramin lyase YP_003277580.1 COG1272, Predicted membrane protein YP_003277581.1 COG0174, GlnA, Glutamine synthetase YP_003277582.1 COG2974, RdgC, DNA recombination-dependent growth factor C YP_003277583.1 COG3855, Fbp, Uncharacterized protein conserved in bacteria YP_003277584.1 COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases YP_003277585.1 COG1346, LrgB, Putative effector of murein hydrolase YP_003277586.1 COG0192, MetK, S-adenosylmethionine synthetase YP_003277587.1 COG1643, HrpA, HrpA-like helicases YP_003277588.1 COG2411, Uncharacterized conserved protein YP_003277589.1 COG1484, DnaC, DNA replication protein YP_003277590.1 COG2866, Predicted carboxypeptidase YP_003277591.1 COG0513, SrmB, Superfamily II DNA and RNA helicases YP_003277592.1 COG5298, Uncharacterized protein conserved in bacteria YP_003277593.1 COG0488, Uup, ATPase components of ABC transporters with duplicatedATPase domains YP_003277594.1 COG4987, CydC, ABC-type transport system involved in cytochrome bdbiosynthesis YP_003277595.1 COG3191, DmpA, L-aminopeptidase/D-esterase YP_003277596.1 COG1464, NlpA, ABC-type metal ion transport system YP_003277597.1 COG1464, NlpA, ABC-type metal ion transport system YP_003277598.1 COG4886, Leucine-rich repeat (LRR) protein YP_003277599.1 COG4220, Phage DNA packaging protein YP_003277600.1 COG0666, Arp, FOG: Ankyrin repeat YP_003277601.1 COG5569, Uncharacterized conserved protein YP_003277602.1 COG3019, Predicted metal-binding protein YP_003277603.1 COG4454, Uncharacterized copper-binding protein YP_003277604.1 COG2132, SufI, Putative multicopper oxidases YP_003277605.1 COG1538, TolC, Outer membrane protein YP_003277606.1 COG1881, Phospholipid-binding protein YP_003277607.1 COG4967, PilV, Tfp pilus assembly protein PilV YP_003277608.1 COG2217, ZntA, Cation transport ATPase YP_003277609.1 COG0789, SoxR, Predicted transcriptional regulators YP_003277610.1 COG0767, Ttg2B, ABC-type transport system involved in resistance toorganic solvents YP_003277611.1 COG1463, Ttg2C, ABC-type transport system involved in resistance toorganic solvents YP_003277612.1 COG3852, NtrB, Signal transduction histidine kinase YP_003277613.1 COG3203, OmpC, Outer membrane protein (porin) YP_003277614.1 COG4779, FepG, ABC-type enterobactin transport system YP_003277615.1 COG0609, FepD, ABC-type Fe3+-siderophore transport system YP_003277616.1 COG4592, FepB, ABC-type Fe2+-enterobactin transport system YP_003277617.1 COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transportsystems YP_003277618.1 COG1414, IclR, Transcriptional regulator YP_003277619.1 COG1629, CirA, Outer membrane receptor proteins YP_003277620.1 COG2141, Coenzyme F420-dependent N5 YP_003277621.1 COG2832, Uncharacterized protein conserved in bacteria YP_003277622.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003277623.1 COG1801, Uncharacterized conserved protein YP_003277624.1 COG3112, Uncharacterized protein conserved in bacteria YP_003277625.1 COG2183, Tex, Transcriptional accessory protein YP_003277626.1 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_003277627.1 COG1639, Predicted signal transduction protein YP_003277628.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003277629.1 COG4585, Signal transduction histidine kinase YP_003277630.1 COG4667, Predicted esterase of the alpha-beta hydrolasesuperfamily YP_003277631.1 COG0628, PerM, Predicted permease YP_003277632.1 COG1454, EutG, Alcohol dehydrogenase YP_003277633.1 COG0744, MrcB, Membrane carboxypeptidase (penicillin-bindingprotein) YP_003277634.1 COG3203, OmpC, Outer membrane protein (porin) YP_003277635.1 COG3427, Uncharacterized conserved protein YP_003277636.1 COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase YP_003277637.1 COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase YP_003277638.1 COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase YP_003277639.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277640.1 COG1846, MarR, Transcriptional regulators YP_003277641.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003277642.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003277643.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003277644.1 COG5266, CbiK, ABC-type Co2+ transport system YP_003277646.1 COG3182, PiuB, Uncharacterized iron-regulated membrane protein YP_003277649.1 COG0824, FcbC, Predicted thioesterase YP_003277650.1 COG0354, Predicted aminomethyltransferase related to GcvT YP_003277651.1 COG1559, Predicted periplasmic solute-binding protein YP_003277652.1 COG0125, Tmk, Thymidylate kinase YP_003277653.1 COG0470, HolB, ATPase involved in DNA replication YP_003277654.1 COG3215, PilZ, Tfp pilus assembly protein PilZ YP_003277655.1 COG0084, TatD, Mg-dependent DNase YP_003277656.1 COG0666, Arp, FOG: Ankyrin repeat YP_003277657.1 COG1132, MdlB, ABC-type multidrug transport system YP_003277658.1 COG2205, KdpD, Osmosensitive K+ channel histidine kinase YP_003277659.1 COG0823, TolB, Periplasmic component of the Tol biopolymertransport system YP_003277660.1 COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_003277661.1 COG1729, Uncharacterized protein conserved in bacteria YP_003277662.1 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_003277663.1 COG3661, AguA, Alpha-glucuronidase YP_003277664.1 COG3474, Cytochrome c2 YP_003277665.1 COG1633, Uncharacterized conserved protein YP_003277666.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003277667.1 COG2200, Rtn, FOG: EAL domain YP_003277668.1 COG1760, SdaA, L-serine deaminase YP_003277669.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003277670.1 COG0789, SoxR, Predicted transcriptional regulators YP_003277671.1 COG0621, MiaB, 2-methylthioadenine synthetase YP_003277672.1 COG2812, DnaX, DNA polymerase III YP_003277673.1 COG0718, Uncharacterized protein conserved in bacteria YP_003277674.1 COG0353, RecR, Recombinational DNA repair protein (RecF pathway) YP_003277675.1 COG0741, MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003277676.1 COG0491, GloB, Zn-dependent hydrolases YP_003277677.1 COG2226, UbiE, Methylase involved in ubiquinone/menaquinonebiosynthesis YP_003277678.1 COG0328, RnhA, Ribonuclease HI YP_003277679.1 COG0526, TrxA, Thiol-disulfide isomerase and thioredoxins YP_003277680.1 COG0303, MoeA, Molybdopterin biosynthesis enzyme YP_003277681.1 COG0746, MobA, Molybdopterin-guanine dinucleotide biosynthesisprotein A YP_003277682.1 COG2896, MoaA, Molybdenum cofactor biosynthesis enzyme YP_003277683.1 COG4838, Uncharacterized protein conserved in bacteria YP_003277684.1 COG3889, Predicted solute binding protein YP_003277685.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003277686.1 COG4539, Predicted membrane protein YP_003277687.1 COG0221, Ppa, Inorganic pyrophosphatase YP_003277688.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003277689.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003277690.1 COG3146, Uncharacterized protein conserved in bacteria YP_003277692.1 COG0347, GlnK, Nitrogen regulatory protein PII YP_003277693.1 COG1611, Predicted Rossmann fold nucleotide-bindingprotein YP_003277694.1 COG0818, DgkA, Diacylglycerol kinase YP_003277695.1 COG1714, Predicted membrane protein/domain YP_003277696.1 COG5373, Predicted membrane protein YP_003277697.1 COG0313, Predicted methyltransferases YP_003277698.1 COG2252, Permeases YP_003277699.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003277700.1 COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes YP_003277701.1 COG0440, IlvH, Acetolactate synthase YP_003277702.1 COG0059, IlvC, Ketol-acid reductoisomerase YP_003277703.1 COG1183, PssA, Phosphatidylserine synthase YP_003277704.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003277705.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003277706.1 COG1686, DacC, D-alanyl-D-alanine carboxypeptidase YP_003277707.1 COG1414, IclR, Transcriptional regulator YP_003277708.1 COG2935, Putative arginyl-tRNA:proteinarginylyltransferase YP_003277709.1 COG2360, Aat, Leu/Phe-tRNA-protein transferase YP_003277710.1 COG0231, Efp, Translation elongation factor P (EF-P)/translationinitiation factor 5A (eIF-5A) YP_003277711.1 COG4394, Uncharacterized protein conserved in bacteria YP_003277712.1 COG0583, LysR, Transcriptional regulator YP_003277713.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003277714.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003277715.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277716.1 COG0322, UvrC, Nuclease subunit of the excinuclease complex YP_003277717.1 COG0558, PgsA, Phosphatidylglycerophosphate synthase YP_003277718.1 COG0776, HimA, Bacterial nucleoid DNA-binding protein YP_003277719.1 COG4942, Membrane-bound metallopeptidase YP_003277720.1 COG2199, FOG: GGDEF domain YP_003277721.1 COG2974, RdgC, DNA recombination-dependent growth factor C YP_003277722.1 COG3893, Inactivated superfamily I helicase YP_003277723.1 COG0760, SurA, Parvulin-like peptidyl-prolyl isomerase YP_003277724.1 COG2427, Uncharacterized conserved protein YP_003277725.1 COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases YP_003277726.1 COG1309, AcrR, Transcriptional regulator YP_003277727.1 COG1946, TesB, Acyl-CoA thioesterase YP_003277728.1 COG0361, InfA, Translation initiation factor 1 (IF-1) YP_003277729.1 COG0688, Psd, Phosphatidylserine decarboxylase YP_003277730.1 COG1273, Uncharacterized conserved protein YP_003277731.1 COG2844, GlnD, UTP:GlnB (protein PII) uridylyltransferase YP_003277732.1 COG0024, Map, Methionine aminopeptidase YP_003277733.1 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase YP_003277734.1 COG3019, Predicted metal-binding protein YP_003277735.1 COG1476, Predicted transcriptional regulators YP_003277737.1 COG4715, Uncharacterized conserved protein YP_003277739.1 COG0714, MoxR-like ATPases YP_003277741.1 COG2425, Uncharacterized protein containing a vonWillebrand factor type A (vWA) domain YP_003277742.1 COG3347, Uncharacterized conserved protein YP_003277743.1 COG2354, Uncharacterized protein conserved in bacteria YP_003277744.1 COG3047, OmpW, Outer membrane protein W YP_003277745.1 COG4301, Uncharacterized conserved protein YP_003277746.1 COG1262, Uncharacterized conserved protein YP_003277747.1 COG2873, MET17, O-acetylhomoserine sulfhydrylase YP_003277748.1 COG2199, FOG: GGDEF domain YP_003277749.1 COG0349, Rnd, Ribonuclease D YP_003277750.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003277751.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277752.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277753.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277756.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003277757.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003277758.1 COG1309, AcrR, Transcriptional regulator YP_003277759.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277760.1 COG4799, Acetyl-CoA carboxylase YP_003277761.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277762.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003277763.1 COG4770, Acetyl/propionyl-CoA carboxylase YP_003277764.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003277765.1 COG3246, Uncharacterized conserved protein YP_003277766.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277767.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277768.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277769.1 COG4221, Short-chain alcohol dehydrogenase of unknownspecificity YP_003277770.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277771.1 COG2072, TrkA, Predicted flavoprotein involved in K+ transport YP_003277773.1 COG0826, Collagenase and related proteases YP_003277774.1 COG1051, ADP-ribose pyrophosphatase YP_003277775.1 COG1859, KptA, RNA:NAD 2'-phosphotransferase YP_003277776.1 COG0546, Gph, Predicted phosphatases YP_003277777.1 COG3236, Uncharacterized protein conserved in bacteria YP_003277778.1 COG1397, DraG, ADP-ribosylglycohydrolase YP_003277779.1 COG3459, Cellobiose phosphorylase YP_003277781.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003277782.1 COG0590, CumB, Cytosine/adenosine deaminases YP_003277783.1 COG1619, LdcA, Uncharacterized proteins YP_003277784.1 COG0087, RplC, Ribosomal protein L3 YP_003277786.1 COG0659, SUL1, Sulfate permease and related transporters (MFSsuperfamily) YP_003277787.1 COG0480, FusA, Translation elongation factors (GTPases) YP_003277788.1 COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-Soxidoreductases YP_003277789.1 COG3561, Phage anti-repressor protein YP_003277790.1 COG2366, Protein related to penicillin acylase YP_003277791.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003277792.1 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcoholdehydrogenases) YP_003277793.1 COG2606, EbsC, Uncharacterized conserved protein YP_003277794.1 COG0344, Predicted membrane protein YP_003277795.1 COG1594, RPB9, DNA-directed RNA polymerase YP_003277796.1 COG3766, Predicted membrane protein YP_003277797.1 COG4262, Predicted spermidine synthase with an N-terminalmembrane domain YP_003277798.1 COG2072, TrkA, Predicted flavoprotein involved in K+ transport YP_003277799.1 COG2206, HD-GYP domain YP_003277800.1 COG3577, Predicted aspartyl protease YP_003277801.1 COG1666, Uncharacterized protein conserved in bacteria YP_003277802.1 COG0812, MurB, UDP-N-acetylmuramate dehydrogenase YP_003277803.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003277804.1 COG5394, Uncharacterized protein conserved in bacteria YP_003277805.1 COG3026, RseB, Negative regulator of sigma E activity YP_003277806.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277807.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003277808.1 COG0790, FOG: TPR repeat YP_003277809.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003277810.1 COG1309, AcrR, Transcriptional regulator YP_003277811.1 COG0845, AcrA, Membrane-fusion protein YP_003277812.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003277813.1 COG1538, TolC, Outer membrane protein YP_003277814.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003277815.1 COG3712, FecR, Fe2+-dicitrate sensor YP_003277816.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003277817.1 COG0330, HflC, Membrane protease subunits YP_003277818.1 COG1585, Membrane protein implicated in regulation of membrane protease activity YP_003277819.1 COG1982, LdcC, Arginine/lysine/ornithine decarboxylases YP_003277820.1 COG5652, Predicted integral membrane protein YP_003277821.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277822.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003277823.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003277824.1 COG1414, IclR, Transcriptional regulator YP_003277825.1 COG1793, CDC9, ATP-dependent DNA ligase YP_003277826.1 COG2032, SodC, Cu/Zn superoxide dismutase YP_003277828.1 COG4166, OppA, ABC-type oligopeptide transport system YP_003277829.1 COG4174, ABC-type uncharacterized transport system YP_003277830.1 COG4239, ABC-type uncharacterized transport system YP_003277831.1 COG4172, ABC-type uncharacterized transport system YP_003277832.1 COG5094, TAF9, Kinitiation factor TFIID YP_003277833.1 COG0141, HisD, Histidinol dehydrogenase YP_003277834.1 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Znfinger domain YP_003277835.1 COG0526, TrxA, Thiol-disulfide isomerase and thioredoxins YP_003277836.1 COG0779, Uncharacterized protein conserved in bacteria YP_003277837.1 COG0195, NusA, Kelongation factor YP_003277838.1 COG0532, InfB, Translation initiation factor 2 (IF-2; GTPase) YP_003277839.1 COG0858, RbfA, Ribosome-binding factor A YP_003277840.1 COG0130, TruB, Pseudouridine synthase YP_003277841.1 COG1217, TypA, Predicted membrane GTPase involved in stressresponse YP_003277842.1 COG4654, Cytochrome c551/c552 YP_003277843.1 COG5323, Uncharacterized conserved protein YP_003277844.1 COG0129, IlvD, Dihydroxyacid dehydratase/phosphogluconatedehydratase YP_003277845.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277846.1 COG0682, Lgt, Prolipoprotein diacylglyceryltransferase YP_003277847.1 COG4573, GatZ, Predicted tagatose 6-phosphate kinase YP_003277848.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277849.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003277850.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003277851.1 COG2217, ZntA, Cation transport ATPase YP_003277852.1 COG3197, FixS, Uncharacterized protein YP_003277853.1 COG3278, CcoN, Cbb3-type cytochrome oxidase YP_003277854.1 COG2993, CcoO, Cbb3-type cytochrome oxidase YP_003277855.1 COG4736, CcoQ, Cbb3-type cytochrome oxidase YP_003277856.1 COG2010, CccA, Cytochrome c YP_003277857.1 COG0348, NapH, Polyferredoxin YP_003277858.1 COG3198, Uncharacterized protein conserved in bacteria YP_003277859.1 COG2245, Predicted membrane protein YP_003277860.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003277861.1 COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-Soxidoreductases YP_003277862.1 COG2836, Uncharacterized conserved protein YP_003277863.1 COG2206, HD-GYP domain YP_003277864.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003277865.1 COG2771, CsgD, DNA-binding HTH domain-containing proteins YP_003277866.1 COG3349, Uncharacterized conserved protein YP_003277867.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277868.1 COG3049, Penicillin V acylase and related amidases YP_003277869.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003277870.1 COG3065, Slp, Starvation-inducible outer membrane lipoprotein YP_003277871.1 COG3317, NlpB, Uncharacterized lipoprotein YP_003277872.1 COG3049, Penicillin V acylase and related amidases YP_003277873.1 COG0583, LysR, Transcriptional regulator YP_003277874.1 COG0518, GuaA, GMP synthase - Glutamine amidotransferase domain YP_003277875.1 COG1794, RacX, Aspartate racemase YP_003277876.1 COG0384, Predicted epimerase YP_003277877.1 COG1846, MarR, Transcriptional regulators YP_003277878.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003277879.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003277880.1 COG2814, AraJ, Arabinose efflux permease YP_003277881.1 COG1525, Micrococcal nuclease (thermonuclease) homologs YP_003277882.1 COG3027, Uncharacterized protein conserved in bacteria YP_003277884.1 COG4206, BtuB, Outer membrane cobalamin receptor protein YP_003277885.1 COG1797, CobB, Cobyrinic acid a YP_003277886.1 COG2087, CobU, Adenosyl cobinamide kinase/adenosyl cobinamidephosphate guanylyltransferase YP_003277887.1 COG0614, FepB, ABC-type Fe3+-hydroxamate transport system YP_003277888.1 COG0609, FepD, ABC-type Fe3+-siderophore transport system YP_003277889.1 COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transportsystems YP_003277890.1 COG2109, BtuR, ATP:corrinoid adenosyltransferase YP_003277891.1 COG0778, NfnB, Nitroreductase YP_003277892.1 COG1270, CbiB, Cobalamin biosynthesis protein CobD/CbiB YP_003277893.1 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase andcobyric acid decarboxylase YP_003277894.1 COG1429, CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases YP_003277895.1 COG0407, HemE, Uroporphyrinogen-III decarboxylase YP_003277896.1 COG1492, CobQ, Cobyric acid synthase YP_003277897.1 COG5455, Predicted integral membrane protein YP_003277898.1 COG2038, CobT, NaMN:DMB phosphoribosyltransferase YP_003277899.1 COG0177, Nth, Predicted EndoIII-related endonuclease YP_003277900.1 COG2831, FhaC, Hemolysin activation/secretion protein YP_003277902.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003277903.1 COG2900, SlyX, Uncharacterized protein conserved in bacteria YP_003277905.1 COG1473, AbgB, Metal-dependentamidase/aminoacylase/carboxypeptidase YP_003277906.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277907.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003277908.1 COG0765, HisM, ABC-type amino acid transport system YP_003277909.1 COG0765, HisM, ABC-type amino acid transport system YP_003277910.1 COG4325, Predicted membrane protein YP_003277911.1 COG0583, LysR, Transcriptional regulator YP_003277912.1 COG2243, CobF, Precorrin-2 methylase YP_003277913.1 COG2875, CobM, Precorrin-4 methylase YP_003277914.1 COG1069, AraB, Ribulose kinase YP_003277915.1 COG2242, CobL, Precorrin-6B methylase 2 YP_003277916.1 COG2099, CobK, Precorrin-6x reductase YP_003277917.1 COG1010, CobJ, Precorrin-3B methylase YP_003277918.1 COG2243, CobF, Precorrin-2 methylase YP_003277919.1 COG2082, CobH, Precorrin isomerase YP_003277920.1 COG0155, CysI, Sulfite reductase YP_003277921.1 COG1240, ChlD, Mg-chelatase subunit ChlD YP_003277922.1 COG1239, ChlI, Mg-chelatase subunit ChlI YP_003277923.1 COG1429, CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases YP_003277924.1 COG0523, Putative GTPases (G3E family) YP_003277925.1 COG3411, Ferredoxin YP_003277926.1 COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transportsystems YP_003277927.1 COG0609, FepD, ABC-type Fe3+-siderophore transport system YP_003277928.1 COG0614, FepB, ABC-type Fe3+-hydroxamate transport system YP_003277929.1 COG1629, CirA, Outer membrane receptor proteins YP_003277930.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003277931.1 COG3293, Transposase and inactivated derivatives YP_003277932.1 COG1396, HipB, Predicted transcriptional regulators YP_003277933.1 COG2160, AraA, L-arabinose isomerase YP_003277934.1 COG3550, HipA, Uncharacterized protein related to capsulebiosynthesis enzymes YP_003277935.1 COG5043, MRS6, Vacuolar protein sorting-associated protein YP_003277936.1 COG0583, LysR, Transcriptional regulator YP_003277937.1 COG4977, Transcriptional regulator containing an amidasedomain and an AraC-type DNA-binding HTH domain YP_003277938.1 COG0607, PspE, Rhodanese-related sulfurtransferase YP_003277939.1 COG0583, LysR, Transcriptional regulator YP_003277940.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277941.1 COG0179, MhpD, 2-keto-4-pentenoatehydratase/2-oxohepta-3-ene-1 YP_003277942.1 COG2192, Predicted carbamoyl transferase YP_003277943.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003277944.1 COG5343, Uncharacterized protein conserved in bacteria YP_003277945.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003277946.1 COG3218, ABC-type uncharacterized transport system YP_003277947.1 COG4445, MiaE, Hydroxylase for synthesis of2-methylthio-cis-ribozeatin in tRNA YP_003277948.1 COG3174, Predicted membrane protein YP_003277949.1 COG4445, MiaE, Hydroxylase for synthesis of2-methylthio-cis-ribozeatin in tRNA YP_003277950.1 COG2199, FOG: GGDEF domain YP_003277951.1 COG3380, Predicted NAD/FAD-dependent oxidoreductase YP_003277952.1 COG3040, Blc, Bacterial lipocalin YP_003277953.1 COG0300, DltE, Short-chain dehydrogenases of various substratespecificities YP_003277954.1 COG5155, ESP1, Separase YP_003277955.1 COG2211, MelB, Na+/melibiose symporter and related transporters YP_003277956.1 COG4098, comFA, Superfamily II DNA/RNA helicase required for DNAuptake (late competence protein) YP_003277957.1 COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases YP_003277958.1 COG3496, Uncharacterized conserved protein YP_003277959.1 COG2907, Predicted NAD/FAD-binding protein YP_003277960.1 COG1309, AcrR, Transcriptional regulator YP_003277961.1 COG1980, Archaeal fructose 1 YP_003277962.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003277963.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003277964.1 COG3119, AslA, Arylsulfatase A and related enzymes YP_003277965.1 COG3181, Uncharacterized protein conserved in bacteria YP_003277966.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003277967.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003277968.1 COG0169, AroE, Shikimate 5-dehydrogenase YP_003277969.1 COG2303, BetA, Choline dehydrogenase and related flavoproteins YP_003277970.1 COG2086, FixA, Electron transfer flavoprotein YP_003277971.1 COG2025, FixB, Electron transfer flavoprotein YP_003277972.1 COG2025, FixB, Electron transfer flavoprotein YP_003277973.1 COG2149, Predicted membrane protein YP_003277974.1 COG2149, Predicted membrane protein YP_003277975.1 COG4973, XerC, Site-specific recombinase XerC YP_003277976.1 COG0625, Gst, Glutathione S-transferase YP_003277977.1 COG1484, DnaC, DNA replication protein YP_003277978.1 COG4584, Transposase and inactivated derivatives YP_003277979.1 COG2944, Predicted transcriptional regulator YP_003277980.1 COG4974, XerD, Site-specific recombinase XerD YP_003277981.1 COG5319, Uncharacterized protein conserved in bacteria YP_003277982.1 COG4974, XerD, Site-specific recombinase XerD YP_003277983.1 COG1309, AcrR, Transcriptional regulator YP_003277984.1 COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) YP_003277986.1 COG0583, LysR, Transcriptional regulator YP_003277987.1 COG1279, Lysine efflux permease YP_003277988.1 COG4108, PrfC, Peptide chain release factor RF-3 YP_003277989.1 COG1522, Lrp, Transcriptional regulators YP_003277990.1 COG5006, Predicted permease YP_003277991.1 COG2766, PrkA, Putative Ser protein kinase YP_003277992.1 COG2718, Uncharacterized conserved protein YP_003277993.1 COG2719, SpoVR, Uncharacterized conserved protein YP_003277994.1 COG1464, NlpA, ABC-type metal ion transport system YP_003277995.1 COG3530, Uncharacterized protein conserved in bacteria YP_003277996.1 COG2199, FOG: GGDEF domain YP_003277997.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003277998.1 COG3712, FecR, Fe2+-dicitrate sensor YP_003277999.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003278000.1 COG3712, FecR, Fe2+-dicitrate sensor YP_003278001.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003278003.1 COG3182, PiuB, Uncharacterized iron-regulated membrane protein YP_003278005.1 COG3416, Uncharacterized protein conserved in bacteria YP_003278006.1 COG0431, Predicted flavoprotein YP_003278007.1 COG0560, SerB, Phosphoserine phosphatase YP_003278008.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278009.1 COG3235, Predicted membrane protein YP_003278010.1 COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) YP_003278011.1 COG1211, IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_003278012.1 COG0245, IspF, 2C-methyl-D-erythritol 2 YP_003278013.1 COG3791, Uncharacterized conserved protein YP_003278014.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278015.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003278016.1 COG3471, Predicted periplasmic/secreted protein YP_003278017.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003278018.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003278019.1 COG0317, SpoT, Guanosine polyphosphatepyrophosphohydrolases/synthetases YP_003278020.1 COG4584, Transposase and inactivated derivatives YP_003278021.1 COG1484, DnaC, DNA replication protein YP_003278022.1 COG1559, Predicted periplasmic solute-binding protein YP_003278023.1 COG1196, Smc, Chromosome segregation ATPases YP_003278024.1 COG1570, XseA, Exonuclease VII YP_003278025.1 COG3311, AlpA, Predicted transcriptional regulator YP_003278026.1 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase YP_003278027.1 COG5343, Uncharacterized protein conserved in bacteria YP_003278028.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003278029.1 COG1633, Uncharacterized conserved protein YP_003278030.1 COG4386, Mu-like prophage tail sheath protein gpL YP_003278031.1 COG3464, Transposase and inactivated derivatives YP_003278032.1 COG3040, Blc, Bacterial lipocalin YP_003278033.1 COG3380, Predicted NAD/FAD-dependent oxidoreductase YP_003278034.1 COG0415, PhrB, Deoxyribodipyrimidine photolyase YP_003278035.1 COG3046, Uncharacterized protein related todeoxyribodipyrimidine photolyase YP_003278036.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003278037.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278038.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003278039.1 COG3437, Response regulator containing a CheY-likereceiver domain and an HD-GYP domain YP_003278040.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003278041.1 COG3279, LytT, Response regulator of the LytR/AlgR family YP_003278042.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003278043.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003278044.1 COG2826, Tra8, Transposase and inactivated derivatives YP_003278045.1 COG2826, Tra8, Transposase and inactivated derivatives YP_003278046.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003278047.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003278048.1 COG4974, XerD, Site-specific recombinase XerD YP_003278049.1 COG4235, Cytochrome c biogenesis factor YP_003278050.1 COG3088, CcmH, Uncharacterized protein involved in biosynthesis ofc-type cytochromes YP_003278051.1 COG0526, TrxA, Thiol-disulfide isomerase and thioredoxins YP_003278052.1 COG1138, CcmF, Cytochrome c biogenesis factor YP_003278053.1 COG2332, CcmE, Cytochrome c-type biogenesis protein CcmE YP_003278054.1 COG3114, CcmD, Heme exporter protein D YP_003278055.1 COG0755, CcmC, ABC-type transport system involved in cytochrome cbiogenesis YP_003278056.1 COG2386, CcmB, ABC-type transport system involved in cytochrome cbiogenesis YP_003278057.1 COG4133, CcmA, ABC-type transport system involved in cytochrome cbiogenesis YP_003278058.1 COG3005, TorC, Nitrate/TMAO reductases YP_003278059.1 COG3043, NapB, Nitrate reductase cytochrome c-type subunit YP_003278060.1 COG0243, BisC, Anaerobic dehydrogenases YP_003278061.1 COG3062, NapD, Uncharacterized protein involved in formation of periplasmic nitrate reductase YP_003278062.1 COG4459, NapE, Periplasmic nitrate reductase system YP_003278063.1 COG0123, AcuC, Deacetylases YP_003278064.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003278065.1 COG5637, Predicted integral membrane protein YP_003278066.1 COG2152, Predicted glycosylase YP_003278067.1 COG0191, Fba, Fructose/tagatose bisphosphate aldolase YP_003278068.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003278069.1 COG5402, Uncharacterized conserved protein YP_003278070.1 COG2895, CysN, GTPases - Sulfate adenylate transferase subunit 1 YP_003278071.1 COG0175, CysH, 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase (PAPS reductase)/FAD synthetase andrelated enzymes YP_003278072.1 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS)3'-phosphatase YP_003278073.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278074.1 COG0583, LysR, Transcriptional regulator YP_003278075.1 COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase YP_003278076.1 COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase YP_003278077.1 COG0417, PolB, DNA polymerase elongation subunit (family B) YP_003278078.1 COG0583, LysR, Transcriptional regulator YP_003278079.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278080.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003278081.1 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelatedesuccinylase and related deacylases YP_003278082.1 COG0461, PyrE, Orotate phosphoribosyltransferase YP_003278083.1 COG0583, LysR, Transcriptional regulator YP_003278084.1 COG2391, Predicted transporter component YP_003278085.1 COG2391, Predicted transporter component YP_003278086.1 COG0640, ArsR, Predicted transcriptional regulators YP_003278087.1 COG0491, GloB, Zn-dependent hydrolases YP_003278088.1 COG2015, Alkyl sulfatase and related hydrolases YP_003278089.1 COG5361, Uncharacterized conserved protein YP_003278090.1 COG3587, Restriction endonuclease YP_003278091.1 COG5361, Uncharacterized conserved protein YP_003278092.1 COG4942, Membrane-bound metallopeptidase YP_003278093.1 COG1135, AbcC, ABC-type metal ion transport system YP_003278094.1 COG2011, AbcD, ABC-type metal ion transport system YP_003278095.1 COG1770, PtrB, Protease II YP_003278096.1 COG1464, NlpA, ABC-type metal ion transport system YP_003278097.1 COG0778, NfnB, Nitroreductase YP_003278098.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003278099.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003278100.1 COG1268, BioY, Uncharacterized conserved protein YP_003278101.1 COG0619, CbiQ, ABC-type cobalt transport system YP_003278102.1 COG1122, CbiO, ABC-type cobalt transport system YP_003278103.1 COG1629, CirA, Outer membrane receptor proteins YP_003278104.1 COG1099, Predicted metal-dependent hydrolases with theTIM-barrel fold YP_003278105.1 COG1541, PaaK, Coenzyme F390 synthetase YP_003278106.1 COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase YP_003278107.1 COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003278108.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003278109.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003278110.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003278112.1 COG1182, AcpD, Acyl carrier protein phosphodiesterase YP_003278113.1 COG0583, LysR, Transcriptional regulator YP_003278114.1 COG3545, Predicted esterase of the alpha/beta hydrolasefold YP_003278115.1 COG1613, Sbp, ABC-type sulfate transport system YP_003278116.1 COG0555, CysU, ABC-type sulfate transport system YP_003278117.1 COG4208, CysW, ABC-type sulfate transport system YP_003278118.1 COG1118, CysA, ABC-type sulfate/molybdate transport systems YP_003278119.1 COG1495, DsbB, Disulfide bond formation protein DsbB YP_003278120.1 COG0625, Gst, Glutathione S-transferase YP_003278121.1 COG0583, LysR, Transcriptional regulator YP_003278122.1 COG2367, PenP, Beta-lactamase class A YP_003278123.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003278124.1 COG3712, FecR, Fe2+-dicitrate sensor YP_003278125.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003278126.1 COG3182, PiuB, Uncharacterized iron-regulated membrane protein YP_003278128.1 COG4232, Thiol:disulfide interchange protein YP_003278129.1 COG0038, EriC, Chloride channel protein EriC YP_003278130.1 COG0262, FolA, Dihydrofolate reductase YP_003278131.1 COG0209, NrdA, Ribonucleotide reductase YP_003278132.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003278133.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003278134.1 COG0548, ArgB, Acetylglutamate kinase YP_003278135.1 COG2064, TadC, Flp pilus assembly protein TadC YP_003278136.1 COG4965, TadB, Flp pilus assembly protein TadB YP_003278137.1 COG4962, CpaF, Flp pilus assembly protein YP_003278138.1 COG4963, CpaE, Flp pilus assembly protein YP_003278139.1 COG4961, TadG, Flp pilus assembly protein TadG YP_003278140.1 COG4961, TadG, Flp pilus assembly protein TadG YP_003278141.1 COG4655, Predicted membrane protein YP_003278142.1 COG3847, Flp, Flp pilus assembly protein YP_003278143.1 COG3847, Flp, Flp pilus assembly protein YP_003278144.1 COG2519, GCD14, tRNA(1-methyladenosine) methyltransferase andrelated methyltransferases YP_003278145.1 COG4964, CpaC, Flp pilus assembly protein YP_003278146.1 COG3745, CpaB, Flp pilus assembly protein CpaB YP_003278147.1 COG4960, CpaA, Flp pilus assembly protein YP_003278148.1 COG2814, AraJ, Arabinose efflux permease YP_003278150.1 COG1629, CirA, Outer membrane receptor proteins YP_003278151.1 COG2382, Fes, Enterochelin esterase and related enzymes YP_003278152.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003278153.1 COG4784, Putative Zn-dependent protease YP_003278154.1 COG5373, Predicted membrane protein YP_003278155.1 COG1408, Predicted phosphohydrolases YP_003278156.1 COG1643, HrpA, HrpA-like helicases YP_003278157.1 COG0583, LysR, Transcriptional regulator YP_003278159.1 COG0845, AcrA, Membrane-fusion protein YP_003278160.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003278161.1 COG1538, TolC, Outer membrane protein YP_003278162.1 COG1236, YSH1, Predicted exonuclease of the beta-lactamase foldinvolved in RNA processing YP_003278163.1 COG0429, Predicted hydrolase of the alpha/beta-hydrolasefold YP_003278164.1 COG0748, HugZ, Putative heme iron utilization protein YP_003278165.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003278166.1 COG3276, SelB, Selenocysteine-specific translation elongationfactor YP_003278167.1 COG1921, SelA, Selenocysteine synthase YP_003278168.1 COG3058, FdhE, Uncharacterized protein involved in formatedehydrogenase formation YP_003278169.1 COG2864, FdnI, Cytochrome b subunit of formate dehydrogenase YP_003278170.1 COG0437, HybA, Fe-S-cluster-containing hydrogenase components 1 YP_003278171.1 COG0243, BisC, Anaerobic dehydrogenases YP_003278172.1 COG0243, BisC, Anaerobic dehydrogenases YP_003278173.1 COG0628, PerM, Predicted permease YP_003278174.1 COG0567, SucA, 2-oxoglutarate dehydrogenase complex YP_003278175.1 COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex YP_003278176.1 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex YP_003278177.1 COG1485, Predicted ATPase YP_003278178.1 COG4942, Membrane-bound metallopeptidase YP_003278179.1 COG0631, PTC1, Serine/threonine protein phosphatase YP_003278180.1 COG1199, DinG, Rad3-related DNA helicases YP_003278181.1 COG4105, ComL, DNA uptake lipoprotein YP_003278182.1 COG0587, DnaE, DNA polymerase III YP_003278183.1 COG2127, Uncharacterized conserved protein YP_003278184.1 COG0542, ClpA, ATPases with chaperone activity YP_003278185.1 COG2610, GntT, H+/gluconate symporter and related permeases YP_003278187.1 COG4567, Response regulator consisting of a CheY-likereceiver domain and a Fis-type HTH domain YP_003278188.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278189.1 COG3346, Uncharacterized conserved protein YP_003278190.1 COG3125, CyoD, Heme/copper-type cytochrome/quinol oxidase YP_003278191.1 COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase YP_003278192.1 COG0843, CyoB, Heme/copper-type cytochrome/quinol oxidases YP_003278193.1 COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases YP_003278194.1 COG2814, AraJ, Arabinose efflux permease YP_003278195.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278196.1 COG0583, LysR, Transcriptional regulator YP_003278197.1 COG1414, IclR, Transcriptional regulator YP_003278198.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003278199.1 COG4340, Uncharacterized protein conserved in bacteria YP_003278200.1 COG0274, DeoC, Deoxyribose-phosphate aldolase YP_003278201.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003278202.1 COG2703, Hemerythrin YP_003278203.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278204.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003278205.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003278206.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003278207.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003278208.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003278209.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003278210.1 COG0564, RluA, Pseudouridylate synthases YP_003278211.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278212.1 COG1003, GcvP, Glycine cleavage system protein P(pyridoxal-binding) YP_003278213.1 COG4884, Uncharacterized protein conserved in bacteria YP_003278214.1 COG0509, GcvH, Glycine cleavage system H protein (lipoate-binding) YP_003278215.1 COG0404, GcvT, Glycine cleavage system T protein(aminomethyltransferase) YP_003278216.1 COG5414, TATA-binding protein-associated factor YP_003278217.1 COG2220, Predicted Zn-dependent hydrolases of thebeta-lactamase fold YP_003278218.1 COG3071, HemY, Uncharacterized enzyme of heme biosynthesis YP_003278219.1 COG2814, AraJ, Arabinose efflux permease YP_003278220.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003278221.1 COG1538, TolC, Outer membrane protein YP_003278222.1 COG1846, MarR, Transcriptional regulators YP_003278223.1 COG5615, Predicted integral membrane protein YP_003278225.1 COG0376, KatG, Catalase (peroxidase I) YP_003278226.1 COG4566, TtrR, Response regulator YP_003278227.1 COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase YP_003278228.1 COG0555, CysU, ABC-type sulfate transport system YP_003278229.1 COG2057, AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase YP_003278230.1 COG2206, HD-GYP domain YP_003278231.1 COG4544, Uncharacterized conserved protein YP_003278233.1 COG0587, DnaE, DNA polymerase III YP_003278234.1 COG0583, LysR, Transcriptional regulator YP_003278235.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278236.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003278237.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003278239.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278240.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003278241.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003278242.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003278243.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003278244.1 COG2957, Peptidylarginine deiminase and related enzymes YP_003278245.1 COG2957, Peptidylarginine deiminase and related enzymes YP_003278246.1 COG0583, LysR, Transcriptional regulator YP_003278247.1 COG2982, AsmA, Uncharacterized protein involved in outer membranebiogenesis YP_003278248.1 COG0583, LysR, Transcriptional regulator YP_003278249.1 COG1189, Predicted rRNA methylase YP_003278250.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278251.1 COG0564, RluA, Pseudouridylate synthases YP_003278252.1 COG1309, AcrR, Transcriptional regulator YP_003278253.1 COG2814, AraJ, Arabinose efflux permease YP_003278254.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003278255.1 COG1538, TolC, Outer membrane protein YP_003278256.1 COG0222, RplL, Ribosomal protein L7/L12 YP_003278257.1 COG3878, Uncharacterized protein conserved in bacteria YP_003278258.1 COG0518, GuaA, GMP synthase - Glutamine amidotransferase domain YP_003278259.1 COG3158, Kup, K+ transporter YP_003278260.1 COG0599, Uncharacterized homolog ofgamma-carboxymuconolactone decarboxylase subunit YP_003278261.1 COG4783, Putative Zn-dependent protease YP_003278262.1 COG1199, DinG, Rad3-related DNA helicases YP_003278263.1 COG1107, Archaea-specific RecJ-like exonuclease YP_003278264.1 COG1720, Uncharacterized conserved protein YP_003278265.1 COG3585, MopI, Molybdopterin-binding protein YP_003278266.1 COG1247, Sortase and related acyltransferases YP_003278267.1 COG3339, Uncharacterized conserved protein YP_003278268.1 COG5290, IkappaB kinase complex YP_003278269.1 COG0488, Uup, ATPase components of ABC transporters with duplicatedATPase domains YP_003278270.1 COG0583, LysR, Transcriptional regulator YP_003278271.1 COG3324, Predicted enzyme related to lactoylglutathionelyase YP_003278272.1 COG0763, LpxB, Lipid A disaccharide synthetase YP_003278273.1 COG3797, Uncharacterized protein conserved in bacteria YP_003278276.1 COG0243, BisC, Anaerobic dehydrogenases YP_003278277.1 COG3301, NrfD, Formate-dependent nitrite reductase YP_003278278.1 COG0437, HybA, Fe-S-cluster-containing hydrogenase components 1 YP_003278279.1 COG4575, ElaB, Uncharacterized conserved protein YP_003278280.1 COG5393, Predicted membrane protein YP_003278281.1 COG2268, Uncharacterized protein conserved in bacteria YP_003278282.1 COG0167, PyrD, Dihydroorotate dehydrogenase YP_003278283.1 COG0120, RpiA, Ribose 5-phosphate isomerase YP_003278284.1 COG0695, GrxC, Glutaredoxin and related proteins YP_003278285.1 COG0339, Dcp, Zn-dependent oligopeptidases YP_003278286.1 COG0190, FolD, 5 YP_003278287.1 COG4566, TtrR, Response regulator YP_003278288.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003278289.1 COG2609, AceE, Pyruvate dehydrogenase complex YP_003278290.1 COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex YP_003278291.1 COG5267, Uncharacterized protein conserved in bacteria YP_003278292.1 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex YP_003278294.1 COG3620, Predicted transcriptional regulator with C-terminal CBS domains YP_003278295.1 COG3550, HipA, Uncharacterized protein related to capsulebiosynthesis enzymes YP_003278296.1 COG3791, Uncharacterized conserved protein YP_003278297.1 COG2271, UhpC, Sugar phosphate permease YP_003278298.1 COG2824, PhnA, Uncharacterized Zn-ribbon-containing proteininvolved in phosphonate metabolism YP_003278299.1 COG3864, Uncharacterized protein conserved in bacteria YP_003278300.1 COG0714, MoxR-like ATPases YP_003278301.1 COG0583, LysR, Transcriptional regulator YP_003278303.1 COG1473, AbgB, Metal-dependentamidase/aminoacylase/carboxypeptidase YP_003278304.1 COG0475, KefB, Kef-type K+ transport systems YP_003278305.1 COG2170, Uncharacterized conserved protein YP_003278306.1 COG2199, FOG: GGDEF domain YP_003278307.1 COG3083, Predicted hydrolase of alkaline phosphatasesuperfamily YP_003278308.1 COG4714, Uncharacterized membrane-anchored proteinconserved in bacteria YP_003278309.1 COG0656, ARA1, Aldo/keto reductases YP_003278310.1 COG0711, AtpF, F0F1-type ATP synthase YP_003278311.1 COG2807, CynX, Cyanate permease YP_003278312.1 COG1574, Predicted metal-dependent hydrolase with theTIM-barrel fold YP_003278313.1 COG4129, Predicted membrane protein YP_003278314.1 COG0531, PotE, Amino acid transporters YP_003278315.1 COG2947, Uncharacterized conserved protein YP_003278316.1 COG3597, Uncharacterized protein/domain associated withGTPases YP_003278317.1 COG2261, Predicted membrane protein YP_003278318.1 COG0791, Spr, Cell wall-associated hydrolases (invasion-associatedproteins) YP_003278319.1 COG1335, PncA, Amidases related to nicotinamidase YP_003278320.1 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_003278321.1 COG1109 YP_003278322.1 COG1519, KdtA, 3-deoxy-D-manno-octulosonic-acid transferase YP_003278323.1 COG1538, TolC, Outer membrane protein YP_003278324.1 COG0607, PspE, Rhodanese-related sulfurtransferase YP_003278325.1 COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase YP_003278326.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003278327.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003278328.1 COG0225, MsrA, Peptide methionine sulfoxide reductase YP_003278329.1 COG5233, GRH1, Peripheral Golgi membrane protein YP_003278330.1 COG1629, CirA, Outer membrane receptor proteins YP_003278331.1 COG4974, XerD, Site-specific recombinase XerD YP_003278332.1 COG0259, PdxH, Pyridoxamine-phosphate oxidase YP_003278333.1 COG2068, Uncharacterized MobA-related protein YP_003278334.1 COG2032, SodC, Cu/Zn superoxide dismutase YP_003278335.1 COG3703, ChaC, Uncharacterized protein involved in cation transport YP_003278336.1 COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_003278337.1 COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesisprotein YP_003278338.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003278339.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003278340.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003278341.1 COG3162, Predicted membrane protein YP_003278342.1 COG4147, DhlC, Predicted symporter YP_003278343.1 COG1062, AdhC, Zn-dependent alcohol dehydrogenases YP_003278344.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003278345.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003278346.1 COG2183, Tex, Transcriptional accessory protein YP_003278347.1 COG4808, Uncharacterized protein conserved in bacteria YP_003278348.1 COG1749, FlgE, Flagellar hook protein FlgE YP_003278350.1 COG4128, Zot, Zonula occludens toxin YP_003278351.1 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase YP_003278352.1 COG4584, Transposase and inactivated derivatives YP_003278353.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278354.1 COG5543, Uncharacterized conserved protein YP_003278355.1 COG0683, LivK, ABC-type branched-chain amino acid transport systems YP_003278356.1 COG0583, LysR, Transcriptional regulator YP_003278357.1 COG0436, Aspartate/tyrosine/aromatic aminotransferase YP_003278358.1 COG2985, Predicted permease YP_003278359.1 COG1196, Smc, Chromosome segregation ATPases YP_003278360.1 COG4974, XerD, Site-specific recombinase XerD YP_003278362.1 COG2067, FadL, Long-chain fatty acid transport protein YP_003278363.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003278364.1 COG1434, Uncharacterized conserved protein YP_003278365.1 COG4770, Acetyl/propionyl-CoA carboxylase YP_003278366.1 COG4799, Acetyl-CoA carboxylase YP_003278367.1 COG1703, ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family YP_003278368.1 COG1884, Sbm, Methylmalonyl-CoA mutase YP_003278369.1 COG1802, GntR, Transcriptional regulators YP_003278370.1 COG3300, MHYT domain (predicted integral membrane sensordomain) YP_003278371.1 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) YP_003278372.1 COG0412, Dienelactone hydrolase and related enzymes YP_003278373.1 COG1626, TreA, Neutral trehalase YP_003278374.1 COG1253, TlyC, Hemolysins and related proteins containing CBS domains YP_003278375.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003278376.1 COG2963, Transposase and inactivated derivatives YP_003278377.1 COG2199, FOG: GGDEF domain YP_003278378.1 COG0189, RimK, Glutathione synthase/Ribosomal protein S6modification enzyme (glutaminyl transferase) YP_003278379.1 COG0042, tRNA-dihydrouridine synthase YP_003278380.1 COG4553, DepA, Poly-beta-hydroxyalkanoate depolymerase YP_003278381.1 COG4553, DepA, Poly-beta-hydroxyalkanoate depolymerase YP_003278382.1 COG2878, Predicted NADH:ubiquinone oxidoreductase YP_003278383.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003278385.1 COG0436, Aspartate/tyrosine/aromatic aminotransferase YP_003278386.1 COG2171, DapD, Tetrahydrodipicolinate N-succinyltransferase YP_003278387.1 COG5008, PilU, Tfp pilus assembly protein YP_003278388.1 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelatedesuccinylase and related deacylases YP_003278389.1 COG2890, HemK, Methylase of polypeptide chain release factors YP_003278390.1 COG3546, Mn-containing catalase YP_003278391.1 COG0488, Uup, ATPase components of ABC transporters with duplicatedATPase domains YP_003278392.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003278393.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003278394.1 COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase YP_003278395.1 COG1496, Uncharacterized conserved protein YP_003278396.1 COG0625, Gst, Glutathione S-transferase YP_003278397.1 COG0179, MhpD, 2-keto-4-pentenoatehydratase/2-oxohepta-3-ene-1 YP_003278398.1 COG1051, ADP-ribose pyrophosphatase YP_003278399.1 COG2200, Rtn, FOG: EAL domain YP_003278400.1 COG1251, NirB, NAD(P)H-nitrite reductase YP_003278401.1 COG3212, Predicted membrane protein YP_003278403.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003278404.1 COG2771, CsgD, DNA-binding HTH domain-containing proteins YP_003278405.1 COG0547, TrpD, Anthranilate phosphoribosyltransferase YP_003278406.1 COG1739, Uncharacterized conserved protein YP_003278407.1 COG0825, AccA, Acetyl-CoA carboxylase alpha subunit YP_003278408.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003278409.1 COG0583, LysR, Transcriptional regulator YP_003278410.1 COG1280, RhtB, Putative threonine efflux protein YP_003278411.1 COG2128, Uncharacterized conserved protein YP_003278412.1 COG2353, Uncharacterized conserved protein YP_003278413.1 COG2353, Uncharacterized conserved protein YP_003278414.1 COG2867, Oligoketide cyclase/lipid transport protein YP_003278415.1 COG4473, EcsB, Predicted ABC-type exoprotein transport system YP_003278416.1 COG1690, RtcB, Uncharacterized conserved protein YP_003278417.1 COG5558, Transposase YP_003278418.1 COG3011, Uncharacterized protein conserved in bacteria YP_003278419.1 COG3621, Patatin YP_003278420.1 COG1748, LYS9, Saccharopine dehydrogenase and related proteins YP_003278421.1 COG2204, AtoC, Response regulator containing CheY-like receiver YP_003278422.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003278423.1 COG1301, GltP, Na+/H+-dicarboxylate symporters YP_003278424.1 COG0824, FcbC, Predicted thioesterase YP_003278425.1 COG0644, FixC, Dehydrogenases (flavoproteins) YP_003278426.1 COG2984, ABC-type uncharacterized transport system YP_003278427.1 COG4120, ABC-type uncharacterized transport system YP_003278428.1 COG1101, PhnK, ABC-type uncharacterized transport system YP_003278429.1 COG0833, LysP, Amino acid transporters YP_003278430.1 COG5572, Predicted integral membrane protein YP_003278431.1 COG0659, SUL1, Sulfate permease and related transporters (MFSsuperfamily) YP_003278432.1 COG2199, FOG: GGDEF domain YP_003278433.1 COG0455, ATPases involved in chromosome partitioning YP_003278434.1 COG1054, Predicted sulfurtransferase YP_003278435.1 COG0655, WrbA, Multimeric flavodoxin WrbA YP_003278436.1 COG2259, Predicted membrane protein YP_003278437.1 COG1741, Pirin-related protein YP_003278438.1 COG0583, LysR, Transcriptional regulator YP_003278439.1 COG3380, Predicted NAD/FAD-dependent oxidoreductase YP_003278440.1 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synthetases YP_003278441.1 COG0220, Predicted S-adenosylmethionine-dependentmethyltransferase YP_003278442.1 COG0013, AlaS, Alanyl-tRNA synthetase YP_003278443.1 COG5454, Predicted secreted protein YP_003278444.1 COG3142, CutC, Uncharacterized protein involved in copper resistance YP_003278445.1 COG0691, SmpB, tmRNA-binding protein YP_003278446.1 COG2867, Oligoketide cyclase/lipid transport protein YP_003278447.1 COG2914, Uncharacterized protein conserved in bacteria YP_003278449.1 COG0516, GuaB, IMP dehydrogenase/GMP reductase YP_003278450.1 COG4118, Phd, Antitoxin of toxin-antitoxin stability system YP_003278451.1 COG4113, Predicted nucleic acid-binding protein YP_003278452.1 COG0519, GuaA, GMP synthase YP_003278454.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278455.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278456.1 COG3384, Uncharacterized conserved protein YP_003278457.1 COG4502, Uncharacterized protein conserved in bacteria YP_003278458.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003278459.1 COG0583, LysR, Transcriptional regulator YP_003278460.1 COG2202, AtoS, FOG: PAS/PAC domain YP_003278461.1 COG0766, MurA, UDP-N-acetylglucosamine enolpyruvyl transferase YP_003278463.1 COG2346, Truncated hemoglobins YP_003278464.1 COG3213, NnrS, Uncharacterized protein involved in response to NO YP_003278465.1 COG1959, Predicted transcriptional regulator YP_003278466.1 COG3399, Uncharacterized protein conserved in bacteria YP_003278467.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003278468.1 COG1196, Smc, Chromosome segregation ATPases YP_003278469.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003278470.1 COG0751, GlyS, Glycyl-tRNA synthetase YP_003278471.1 COG4694, Uncharacterized protein conserved in bacteria YP_003278472.1 COG3709, Uncharacterized component of phosphonate metabolism YP_003278473.1 COG5518, Bacteriophage capsid portal protein YP_003278474.1 COG5484, Uncharacterized conserved protein YP_003278475.1 COG4974, XerD, Site-specific recombinase XerD YP_003278476.1 COG2433, Uncharacterized conserved protein YP_003278477.1 COG3039, Transposase and inactivated derivatives YP_003278478.1 COG2357, Uncharacterized protein conserved in bacteria YP_003278479.1 COG5449, Uncharacterized conserved protein YP_003278480.1 COG4299, Uncharacterized protein conserved in bacteria YP_003278481.1 COG0796, MurI, Glutamate racemase YP_003278482.1 COG4974, XerD, Site-specific recombinase XerD YP_003278483.1 COG4386, Mu-like prophage tail sheath protein gpL YP_003278484.1 COG3950, Predicted ATP-binding protein involved in virulence YP_003278485.1 COG1287, Uncharacterized membrane protein YP_003278487.1 COG3210, FhaB, Large exoproteins involved in heme utilization or adhesion YP_003278488.1 COG2831, FhaC, Hemolysin activation/secretion protein YP_003278489.1 COG2020, STE14, Putative protein-S-isoprenylcysteinemethyltransferase YP_003278490.1 COG3155, ElbB, Uncharacterized protein involved in an early stage of isoprenoid biosynthesis YP_003278492.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003278493.1 COG5664, Predicted secreted Zn-dependent protease YP_003278494.1 COG4653, Predicted phage phi-C31 gp36 major capsid-likeprotein YP_003278495.1 COG2375, ViuB, Siderophore-interacting protein YP_003278496.1 COG1309, AcrR, Transcriptional regulator YP_003278497.1 COG3182, PiuB, Uncharacterized iron-regulated membrane protein YP_003278498.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003278500.1 COG1484, DnaC, DNA replication protein YP_003278501.1 COG4584, Transposase and inactivated derivatives YP_003278502.1 COG3358, Uncharacterized conserved protein YP_003278504.1 COG3547, Transposase and inactivated derivatives YP_003278505.1 COG0789, SoxR, Predicted transcriptional regulators YP_003278506.1 COG2217, ZntA, Cation transport ATPase YP_003278507.1 COG0597, LspA, Lipoprotein signal peptidase YP_003278508.1 COG1968, BacA, Uncharacterized bacitracin resistance protein YP_003278509.1 COG0672, FTR1, High-affinity Fe2+/Pb2+ permease YP_003278510.1 COG2194, Predicted membrane-associated YP_003278511.1 COG3573, Predicted oxidoreductase YP_003278512.1 COG3696, Putative silver efflux pump YP_003278513.1 COG0845, AcrA, Membrane-fusion protein YP_003278514.1 COG1538, TolC, Outer membrane protein YP_003278515.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003278516.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278517.1 COG3570, StrB, Streptomycin 6-kinase YP_003278518.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003278519.1 COG1971, Predicted membrane protein YP_003278520.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003278521.1 COG2963, Transposase and inactivated derivatives YP_003278522.1 COG0818, DgkA, Diacylglycerol kinase YP_003278523.1 COG3907, PAP2 (acid phosphatase) superfamily protein YP_003278524.1 COG1815, FlgB, Flagellar basal body protein YP_003278525.1 COG2217, ZntA, Cation transport ATPase YP_003278526.1 COG2217, ZntA, Cation transport ATPase YP_003278527.1 COG0789, SoxR, Predicted transcriptional regulators YP_003278528.1 COG0336, TrmD, tRNA-(guanine-N1)-methyltransferase YP_003278529.1 COG2194, Predicted membrane-associated YP_003278530.1 COG4639, Predicted kinase YP_003278532.1 COG3547, Transposase and inactivated derivatives YP_003278533.1 COG5013, NarG, Nitrate reductase alpha subunit YP_003278534.1 COG5569, Uncharacterized conserved protein YP_003278535.1 COG3696, Putative silver efflux pump YP_003278536.1 COG0845, AcrA, Membrane-fusion protein YP_003278537.1 COG1538, TolC, Outer membrane protein YP_003278538.1 COG1385, Uncharacterized protein conserved in bacteria YP_003278539.1 COG1593, DctQ, TRAP-type C4-dicarboxylate transport system YP_003278540.1 COG2608, CopZ, Copper chaperone YP_003278541.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278542.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003278543.1 COG2132, SufI, Putative multicopper oxidases YP_003278544.1 COG3667, PcoB, Uncharacterized protein involved in copperresistance YP_003278545.1 COG2372, CopC, Uncharacterized protein YP_003278546.1 COG1276, PcoD, Putative copper export protein YP_003278547.1 COG2217, ZntA, Cation transport ATPase YP_003278548.1 COG0640, ArsR, Predicted transcriptional regulators YP_003278549.1 COG0394, Wzb, Protein-tyrosine-phosphatase YP_003278550.1 COG1055, ArsB, Na+/H+ antiporter NhaD and related arsenitepermeases YP_003278551.1 COG1393, ArsC, Arsenate reductase and related proteins YP_003278552.1 COG0431, Predicted flavoprotein YP_003278553.1 COG3104, PTR2, Dipeptide/tripeptide permease YP_003278554.1 COG1734, DksA, DnaK suppressor protein YP_003278555.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003278556.1 COG0659, SUL1, Sulfate permease and related transporters (MFSsuperfamily) YP_003278557.1 COG1961, PinR, Site-specific recombinases YP_003278558.1 COG4644, Transposase and inactivated derivatives YP_003278559.1 COG2814, AraJ, Arabinose efflux permease YP_003278560.1 COG1344, FlgL, Flagellin and related hook-associated proteins YP_003278561.1 COG0855, Ppk, Polyphosphate kinase YP_003278562.1 COG1484, DnaC, DNA replication protein YP_003278563.1 COG2411, Uncharacterized conserved protein YP_003278564.1 COG4565, CitB, Response regulator of citrate/malate metabolism YP_003278565.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003278566.1 COG3829, RocR, Transcriptional regulator containing PAS YP_003278567.1 COG3300, MHYT domain (predicted integral membrane sensordomain) YP_003278568.1 COG0542, ClpA, ATPases with chaperone activity YP_003278569.1 COG1660, Predicted P-loop-containing kinase YP_003278570.1 COG1298, FlhA, Flagellar biosynthesis pathway YP_003278571.1 COG0583, LysR, Transcriptional regulator YP_003278572.1 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelatedesuccinylase and related deacylases YP_003278573.1 COG2110, Predicted phosphatase homologous to theC-terminal domain of histone macroH2A1 YP_003278574.1 COG3203, OmpC, Outer membrane protein (porin) YP_003278575.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003278576.1 COG2318, DinB, Uncharacterized protein conserved in bacteria YP_003278577.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003278578.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003278579.1 COG2814, AraJ, Arabinose efflux permease YP_003278580.1 COG1680, AmpC, Beta-lactamase class C and other penicillin bindingproteins YP_003278581.1 COG0583, LysR, Transcriptional regulator YP_003278582.1 COG0583, LysR, Transcriptional regulator YP_003278583.1 COG0583, LysR, Transcriptional regulator YP_003278584.1 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases YP_003278585.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems YP_003278586.1 COG3339, Uncharacterized conserved protein YP_003278587.1 COG2271, UhpC, Sugar phosphate permease YP_003278588.1 COG0583, LysR, Transcriptional regulator YP_003278589.1 COG0563, Adk, Adenylate kinase and related kinases YP_003278590.1 COG1247, Sortase and related acyltransferases YP_003278591.1 COG2141, Coenzyme F420-dependent N5 YP_003278592.1 COG2141, Coenzyme F420-dependent N5 YP_003278593.1 COG0625, Gst, Glutathione S-transferase YP_003278594.1 COG0583, LysR, Transcriptional regulator YP_003278595.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003278596.1 COG4585, Signal transduction histidine kinase YP_003278597.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003278598.1 COG3539, FimA, P pilus assembly protein YP_003278599.1 COG3121, FimC, P pilus assembly protein YP_003278600.1 COG3188, FimD, P pilus assembly protein YP_003278601.1 COG3539, FimA, P pilus assembly protein YP_003278602.1 COG1926, Predicted phosphoribosyltransferases YP_003278603.1 COG0004, AmtB, Ammonia permease YP_003278604.1 COG4310, Uncharacterized protein conserved in bacteriawith an aminopeptidase-like domain YP_003278605.1 COG1420, HrcA, Transcriptional regulator of heat shock gene YP_003278606.1 COG4889, Predicted helicase YP_003278607.1 COG3722, MtlR, Transcriptional regulator YP_003278608.1 COG0259, PdxH, Pyridoxamine-phosphate oxidase YP_003278609.1 COG0583, LysR, Transcriptional regulator YP_003278610.1 similar to RRSL_03925; COG0456, RimI, Acetyltransferases YP_003278611.1 COG3058, FdhE, Uncharacterized protein involved in formatedehydrogenase formation YP_003278612.1 COG2320, GrpB, Uncharacterized conserved protein YP_003278613.1 COG3039, Transposase and inactivated derivatives YP_003278614.1 COG0251, TdcF, Putative translation initiation inhibitor YP_003278615.1 COG0598, CorA, Mg2+ and Co2+ transporters YP_003278616.1 COG0583, LysR, Transcriptional regulator YP_003278617.1 COG1073, Hydrolases of the alpha/beta superfamily YP_003278618.1 COG1073, Hydrolases of the alpha/beta superfamily YP_003278619.1 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases YP_003278620.1 COG1902, NemA, NADH:flavin oxidoreductases YP_003278621.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003278622.1 COG3203, OmpC, Outer membrane protein (porin) YP_003278623.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278624.1 COG4584, Transposase and inactivated derivatives YP_003278625.1 COG1484, DnaC, DNA replication protein YP_003278626.1 COG4623, Predicted soluble lytic transglycosylase fused toan ABC-type amino acid-binding protein YP_003278627.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278628.1 COG2200, Rtn, FOG: EAL domain YP_003278629.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278630.1 COG1846, MarR, Transcriptional regulators YP_003278631.1 COG1280, RhtB, Putative threonine efflux protein YP_003278632.1 COG5006, Predicted permease YP_003278633.1 COG0583, LysR, Transcriptional regulator YP_003278634.1 COG3329, Predicted permease YP_003278635.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003278636.1 COG2199, FOG: GGDEF domain YP_003278637.1 COG0693, ThiJ, Putative intracellular protease/amidase YP_003278638.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003278639.1 COG2602, Beta-lactamase class D YP_003278640.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003278641.1 COG3238, Uncharacterized protein conserved in bacteria YP_003278642.1 COG0583, LysR, Transcriptional regulator YP_003278643.1 COG4755, Uncharacterized protein conserved in archaea YP_003278644.1 COG2344, AT-rich DNA-binding protein YP_003278645.1 COG5517, Small subunit of phenylpropionate dioxygenase YP_003278646.1 COG0456, RimI, Acetyltransferases YP_003278647.1 COG1115, AlsT, Na+/alanine symporter YP_003278649.1 COG4631, XdhB, Xanthine dehydrogenase YP_003278650.1 COG1846, MarR, Transcriptional regulators YP_003278651.1 COG4335, DNA alkylation repair enzyme YP_003278652.1 COG3739, Uncharacterized integral membrane protein YP_003278653.1 COG1974, LexA, SOS-response transcriptional repressors(RecA-mediated autopeptidases) YP_003278654.1 COG3051, CitF, Citrate lyase YP_003278655.1 COG3950, Predicted ATP-binding protein involved in virulence YP_003278657.1 COG4420, Predicted membrane protein YP_003278658.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003278659.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003278660.1 COG3539, FimA, P pilus assembly protein YP_003278661.1 COG0583, LysR, Transcriptional regulator YP_003278662.1 COG1670, RimL, Acetyltransferases YP_003278663.1 COG1476, Predicted transcriptional regulators YP_003278664.1 COG3550, HipA, Uncharacterized protein related to capsulebiosynthesis enzymes YP_003278665.1 COG3177, Uncharacterized conserved protein YP_003278666.1 COG4974, XerD, Site-specific recombinase XerD YP_003278667.1 COG1525, Micrococcal nuclease (thermonuclease) homologs YP_003278668.1 COG0724, RNA-binding proteins (RRM domain) YP_003278669.1 COG2135, Uncharacterized conserved protein YP_003278670.1 COG0540, PyrB, Aspartate carbamoyltransferase YP_003278671.1 COG2733, Predicted membrane protein YP_003278672.1 COG4770, Acetyl/propionyl-CoA carboxylase YP_003278673.1 COG3618, Predicted metal-dependent hydrolase of theTIM-barrel fold YP_003278674.1 COG0137, ArgG, Argininosuccinate synthase YP_003278675.1 COG4129, Predicted membrane protein YP_003278677.1 COG1926, Predicted phosphoribosyltransferases YP_003278678.1 COG3808, OVP1, Inorganic pyrophosphatase YP_003278679.1 COG1542, Uncharacterized conserved protein YP_003278680.1 COG3314, Uncharacterized protein conserved in bacteria YP_003278681.1 COG4299, Uncharacterized protein conserved in bacteria YP_003278682.1 COG4372, Uncharacterized protein conserved in bacteriawith the myosin-like domain YP_003278683.1 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase YP_003278684.1 COG3002, Uncharacterized protein conserved in bacteria YP_003278685.1 COG3403, Uncharacterized conserved protein YP_003278686.1 COG4066, Uncharacterized protein conserved in archaea YP_003278687.1 COG3144, FliK, Flagellar hook-length control protein YP_003278688.1 COG0846, SIR2, NAD-dependent protein deacetylases YP_003278690.1 COG3170, FimV, Tfp pilus assembly protein FimV YP_003278691.1 COG4832, Uncharacterized conserved protein YP_003278692.1 COG0833, LysP, Amino acid transporters YP_003278693.1 COG0419, SbcC, ATPase involved in DNA repair YP_003278694.1 COG2841, Uncharacterized protein conserved in bacteria YP_003278695.1 COG3096, MukB, Uncharacterized protein involved in chromosome partitioning YP_003278696.1 COG3772, Phage-related lysozyme (muraminidase) YP_003278697.1 COG2814, AraJ, Arabinose efflux permease YP_003278698.1 COG3846, TrbL, Type IV secretory pathway YP_003278700.1 COG1445, FrwB, Phosphotransferase system fructose-specificcomponent IIB YP_003278701.1 COG0055, AtpD, F0F1-type ATP synthase YP_003278702.1 COG2719, SpoVR, Uncharacterized conserved protein YP_003278703.1 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) YP_003278705.1 COG5373, Predicted membrane protein YP_003278706.1 COG3645, Uncharacterized phage-encoded protein YP_003278707.1 COG1070, XylB, Sugar (pentulose and hexulose) kinases YP_003278709.1 COG1974, LexA, SOS-response transcriptional repressors(RecA-mediated autopeptidases) YP_003278711.1 COG0687, PotD, Spermidine/putrescine-binding periplasmic protein YP_003278712.1 COG5630, ARG2, Acetylglutamate synthase YP_003278713.1 COG2974, RdgC, DNA recombination-dependent growth factor C YP_003278714.1 COG1850, RbcL, Ribulose 1 YP_003278715.1 COG3944, Capsular polysaccharide biosynthesis protein YP_003278716.1 COG4618, ArpD, ABC-type protease/lipase transport system YP_003278717.1 COG3071, HemY, Uncharacterized enzyme of heme biosynthesis YP_003278718.1 COG0582, XerC, Integrase YP_003278719.1 COG3275, LytS, Putative regulator of cell autolysis YP_003278720.1 COG1612, CtaA, Uncharacterized protein required for cytochromeoxidase assembly YP_003278721.1 COG0109, CyoE, Polyprenyltransferase (cytochrome oxidase assemblyfactor) YP_003278722.1 COG3258, Cytochrome c YP_003278723.1 COG2863, Cytochrome c553 YP_003278724.1 COG0642, BaeS, Signal transduction histidine kinase YP_003278725.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003278726.1 COG4232, Thiol:disulfide interchange protein YP_003278727.1 COG1651, DsbG, Protein-disulfide isomerase YP_003278728.1 COG1416, Uncharacterized conserved protein YP_003278729.1 COG1752, RssA, Predicted esterase of the alpha-beta hydrolasesuperfamily YP_003278730.1 COG0272, Lig, NAD-dependent DNA ligase (contains BRCT domain typeII) YP_003278731.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003278732.1 COG1196, Smc, Chromosome segregation ATPases YP_003278733.1 COG1742, Uncharacterized conserved protein YP_003278734.1 COG5001, Predicted signal transduction protein containing a membrane domain YP_003278735.1 COG0655, WrbA, Multimeric flavodoxin WrbA YP_003278736.1 COG1309, AcrR, Transcriptional regulator YP_003278737.1 COG1538, TolC, Outer membrane protein YP_003278738.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003278739.1 COG0845, AcrA, Membrane-fusion protein YP_003278740.1 COG2814, AraJ, Arabinose efflux permease YP_003278741.1 COG2814, AraJ, Arabinose efflux permease YP_003278742.1 COG3919, Predicted ATP-grasp enzyme YP_003278743.1 COG0300, DltE, Short-chain dehydrogenases of various substratespecificities YP_003278744.1 COG2130, Putative NADP-dependent oxidoreductases YP_003278745.1 COG2050, PaaI, Uncharacterized protein YP_003278746.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003278747.1 COG0350, Ada, Methylated DNA-protein cysteine methyltransferase YP_003278748.1 COG0848, ExbD, Biopolymer transport protein YP_003278749.1 COG1092, Predicted SAM-dependent methyltransferases YP_003278751.1 COG0590, CumB, Cytosine/adenosine deaminases YP_003278752.1 COG2807, CynX, Cyanate permease YP_003278753.1 COG4639, Predicted kinase YP_003278754.1 COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_003278755.1 COG3391, Uncharacterized conserved protein YP_003278756.1 COG3221, PhnD, ABC-type phosphate/phosphonate transport system YP_003278757.1 COG3638, ABC-type phosphate/phosphonate transport system YP_003278758.1 COG3639, ABC-type phosphate/phosphonate transport system YP_003278759.1 COG1522, Lrp, Transcriptional regulators YP_003278760.1 COG2010, CccA, Cytochrome c YP_003278761.1 COG2303, BetA, Choline dehydrogenase and related flavoproteins YP_003278762.1 COG0312, TldD, Predicted Zn-dependent proteases and theirinactivated homologs YP_003278763.1 COG2205, KdpD, Osmosensitive K+ channel histidine kinase YP_003278764.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003278765.1 COG0229, Conserved domain frequently associated withpeptide methionine sulfoxide reductase YP_003278766.1 COG0785, CcdA, Cytochrome c biogenesis protein YP_003278767.1 COG0225, MsrA, Peptide methionine sulfoxide reductase YP_003278768.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003278769.1 COG0847, DnaQ, DNA polymerase III YP_003278770.1 COG0633, Fdx, Ferredoxin YP_003278771.1 COG0443, DnaK, Molecular chaperone YP_003278772.1 COG1076, DjlA, DnaJ-domain-containing proteins 1 YP_003278773.1 COG0316, IscA, Uncharacterized conserved protein YP_003278774.1 COG0822, IscU, NifU homolog involved in Fe-S cluster formation YP_003278775.1 COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfuraseand related enzymes YP_003278776.1 COG1959, Predicted transcriptional regulator YP_003278777.1 COG0556, UvrB, Helicase subunit of the DNA excision repair complex YP_003278778.1 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase YP_003278779.1 COG3384, Uncharacterized conserved protein YP_003278780.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003278781.1 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcoholdehydrogenases) YP_003278782.1 COG0673, MviM, Predicted dehydrogenases and related proteins YP_003278783.1 COG3384, Uncharacterized conserved protein YP_003278784.1 COG0541, Ffh, Signal recognition particle GTPase YP_003278785.1 COG3618, Predicted metal-dependent hydrolase of theTIM-barrel fold YP_003278786.1 COG0684, MenG, Demethylmenaquinone methyltransferase YP_003278787.1 COG2159, Predicted metal-dependent hydrolase of theTIM-barrel fold YP_003278788.1 COG2271, UhpC, Sugar phosphate permease YP_003278789.1 COG0725, ModA, ABC-type molybdate transport system YP_003278791.1 COG2409, Predicted drug exporters of the RND superfamily YP_003278792.1 COG2124, CypX, Cytochrome P450 YP_003278793.1 COG2836, Uncharacterized conserved protein YP_003278794.1 COG3562, KpsS, Capsule polysaccharide export protein YP_003278795.1 COG3563, KpsC, Capsule polysaccharide export protein YP_003278796.1 COG0757, AroQ, 3-dehydroquinate dehydratase II YP_003278797.1 COG4641, Uncharacterized protein conserved in bacteria YP_003278798.1 COG0166, Pgi, Glucose-6-phosphate isomerase YP_003278799.1 COG1210, GalU, UDP-glucose pyrophosphorylase YP_003278800.1 COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase YP_003278801.1 COG1898, RfbC, dTDP-4-dehydrorhamnose 3 YP_003278802.1 COG1209, RfbA, dTDP-glucose pyrophosphorylase YP_003278803.1 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase YP_003278804.1 COG1088, RfbB, dTDP-D-glucose 4 YP_003278805.1 COG4509, Uncharacterized protein conserved in bacteria YP_003278806.1 COG0438, RfaG, Glycosyltransferase YP_003278807.1 COG3039, Transposase and inactivated derivatives YP_003278808.1 COG3754, RgpF, Lipopolysaccharide biosynthesis protein YP_003278809.1 COG1752, RssA, Predicted esterase of the alpha-beta hydrolasesuperfamily YP_003278810.1 COG1216, Predicted glycosyltransferases YP_003278811.1 COG1596, Wza, Periplasmic protein involved in polysaccharide export YP_003278812.1 COG3524, KpsE, Capsule polysaccharide export protein YP_003278813.1 COG1134, TagH, ABC-type polysaccharide/polyol phosphate transportsystem YP_003278814.1 COG1682, TagG, ABC-type polysaccharide/polyol phosphate exportsystems YP_003278815.1 COG0709, SelD, Selenophosphate synthase YP_003278816.1 COG1522, Lrp, Transcriptional regulators YP_003278817.1 COG0393, Uncharacterized conserved protein YP_003278818.1 COG0583, LysR, Transcriptional regulator YP_003278819.1 COG1846, MarR, Transcriptional regulators YP_003278820.1 COG3435, Gentisate 1 YP_003278821.1 COG0179, MhpD, 2-keto-4-pentenoatehydratase/2-oxohepta-3-ene-1 YP_003278822.1 COG0625, Gst, Glutathione S-transferase YP_003278823.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278824.1 COG5055, RAD52, Recombination DNA repair protein (RAD52 pathway) YP_003278825.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003278826.1 COG4649, Uncharacterized protein conserved in bacteria YP_003278827.1 COG3755, Uncharacterized protein conserved in bacteria YP_003278828.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003278829.1 COG3070, TfoX, Regulator of competence-specific genes YP_003278830.1 COG3189, Uncharacterized conserved protein YP_003278831.1 COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003278832.1 COG1917, Uncharacterized conserved protein YP_003278833.1 COG1748, LYS9, Saccharopine dehydrogenase and related proteins YP_003278834.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003278835.1 COG0583, LysR, Transcriptional regulator YP_003278836.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003278837.1 COG2140, Thermophilic glucose-6-phosphate isomerase andrelated metalloenzymes YP_003278838.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003278839.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278840.1 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ)biosynthesis protein C YP_003278841.1 COG1917, Uncharacterized conserved protein YP_003278842.1 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) YP_003278843.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003278844.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003278845.1 COG1280, RhtB, Putative threonine efflux protein YP_003278846.1 COG1247, Sortase and related acyltransferases YP_003278847.1 COG2603, Predicted ATPase YP_003278848.1 COG0129, IlvD, Dihydroxyacid dehydratase/phosphogluconatedehydratase YP_003278849.1 COG1115, AlsT, Na+/alanine symporter YP_003278850.1 COG3577, Predicted aspartyl protease YP_003278851.1 COG3531, Predicted protein-disulfide isomerase YP_003278852.1 COG4993, Gcd, Glucose dehydrogenase YP_003278853.1 COG0538, Icd, Isocitrate dehydrogenases YP_003278854.1 COG1430, Uncharacterized conserved protein YP_003278856.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003278857.1 COG2838, Icd, Monomeric isocitrate dehydrogenase YP_003278858.1 COG2916, Hns, DNA-binding protein H-NS YP_003278859.1 COG5001, Predicted signal transduction protein containing a membrane domain YP_003278860.1 COG4282, SMI1, Protein involved in beta-1 YP_003278861.1 COG3384, Uncharacterized conserved protein YP_003278862.1 COG0605, SodA, Superoxide dismutase YP_003278863.1 COG1570, XseA, Exonuclease VII YP_003278864.1 COG0811, TolQ, Biopolymer transport proteins YP_003278865.1 COG0848, ExbD, Biopolymer transport protein YP_003278866.1 COG2837, Predicted iron-dependent peroxidase YP_003278867.1 COG3832, Uncharacterized conserved protein YP_003278868.1 COG3344, Retron-type reverse transcriptase YP_003278869.1 COG5607, Uncharacterized conserved protein YP_003278870.1 COG0656, ARA1, Aldo/keto reductases YP_003278871.1 COG0583, LysR, Transcriptional regulator YP_003278872.1 COG2610, GntT, H+/gluconate symporter and related permeases YP_003278873.1 COG1663, LpxK, Tetraacyldisaccharide-1-P 4'-kinase YP_003278874.1 COG2835, Uncharacterized conserved protein YP_003278875.1 COG1212, KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_003278876.1 COG0563, Adk, Adenylate kinase and related kinases YP_003278877.1 COG0252, AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferasesubunit D YP_003278878.1 COG1974, LexA, SOS-response transcriptional repressors(RecA-mediated autopeptidases) YP_003278879.1 COG5298, Uncharacterized protein conserved in bacteria YP_003278880.1 COG1391, GlnE, Glutamine synthetase adenylyltransferase YP_003278881.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003278882.1 COG4992, ArgD, Ornithine/acetylornithine aminotransferase YP_003278883.1 COG2404, Predicted phosphohydrolase (DHH superfamily) YP_003278884.1 COG4233, Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis YP_003278885.1 COG5514, Uncharacterized conserved protein YP_003278886.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003278887.1 COG1228, HutI, Imidazolonepropionase and related amidohydrolases YP_003278888.1 COG3637, Opacity protein and related surface antigens YP_003278889.1 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis YP_003278890.1 COG1873, Uncharacterized conserved protein YP_003278891.1 COG4344, Uncharacterized protein conserved in archaea YP_003278892.1 COG3898, Uncharacterized membrane-bound protein YP_003278893.1 COG3450, Predicted enzyme of the cupin superfamily YP_003278894.1 COG3042, Hlx, Putative hemolysin YP_003278895.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003278896.1 COG3619, Predicted membrane protein YP_003278897.1 COG2199, FOG: GGDEF domain YP_003278898.1 COG2199, FOG: GGDEF domain YP_003278899.1 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases YP_003278900.1 COG0324, MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase YP_003278901.1 COG2927, HolC, DNA polymerase III YP_003278902.1 COG0260, PepB, Leucyl aminopeptidase YP_003278903.1 COG0795, Predicted permeases YP_003278904.1 COG0795, Predicted permeases YP_003278905.1 COG2138, Uncharacterized conserved protein YP_003278906.1 COG0583, LysR, Transcriptional regulator YP_003278907.1 COG0436, Aspartate/tyrosine/aromatic aminotransferase YP_003278908.1 COG2391, Predicted transporter component YP_003278909.1 COG0737, UshA, 5'-nucleotidase/2' YP_003278910.1 COG5267, Uncharacterized protein conserved in bacteria YP_003278911.1 COG3258, Cytochrome c YP_003278912.1 COG4324, Predicted aminopeptidase YP_003278913.1 COG5501, Predicted secreted protein YP_003278914.1 COG4654, Cytochrome c551/c552 YP_003278915.1 COG2041, Sulfite oxidase and related enzymes YP_003278916.1 COG4654, Cytochrome c551/c552 YP_003278917.1 COG0743, Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003278918.1 COG0491, GloB, Zn-dependent hydrolases YP_003278919.1 COG1416, Uncharacterized conserved protein YP_003278920.1 COG0640, ArsR, Predicted transcriptional regulators YP_003278921.1 COG1051, ADP-ribose pyrophosphatase YP_003278922.1 COG0491, GloB, Zn-dependent hydrolases YP_003278923.1 COG3246, Uncharacterized conserved protein YP_003278924.1 COG4916, Uncharacterized protein containing a TIR(Toll-Interleukin 1-resistance) domain YP_003278925.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278926.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003278927.1 COG2175, TauD, Probable taurine catabolism dioxygenase YP_003278928.1 COG3545, Predicted esterase of the alpha/beta hydrolasefold YP_003278929.1 COG3181, Uncharacterized protein conserved in bacteria YP_003278930.1 COG3203, OmpC, Outer membrane protein (porin) YP_003278931.1 COG2146 YP_003278932.1 COG2761, FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_003278933.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003278934.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003278935.1 COG1530, CafA, Ribonucleases G and E YP_003278936.1 COG0424, Maf, Nucleotide-binding protein implicated in inhibitionof septum formation YP_003278937.1 COG1576, Uncharacterized conserved protein YP_003278938.1 COG0799, Uncharacterized homolog of plant Iojap protein YP_003278939.1 COG0408, HemF, Coproporphyrinogen III oxidase YP_003278940.1 COG0151, PurD, Phosphoribosylamine-glycine ligase YP_003278941.1 COG0217, Uncharacterized conserved protein YP_003278942.1 COG0433, Predicted ATPase YP_003278943.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003278944.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003278945.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003278946.1 COG1171, IlvA, Threonine dehydratase YP_003278947.1 COG0035, Upp, Uracil phosphoribosyltransferase YP_003278948.1 COG4235, Cytochrome c biogenesis factor YP_003278949.1 COG1464, NlpA, ABC-type metal ion transport system YP_003278950.1 COG0693, ThiJ, Putative intracellular protease/amidase YP_003278951.1 COG0789, SoxR, Predicted transcriptional regulators YP_003278952.1 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases YP_003278953.1 COG5316, Uncharacterized conserved protein YP_003278954.1 COG0217, Uncharacterized conserved protein YP_003278955.1 COG2133, Glucose/sorbosone dehydrogenases YP_003278956.1 COG2311, Predicted membrane protein YP_003278957.1 COG2715, SpmA, Uncharacterized membrane protein YP_003278958.1 COG4339, Uncharacterized protein conserved in bacteria YP_003278959.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003278960.1 COG3565, Predicted dioxygenase of extradiol dioxygenasefamily YP_003278961.1 COG0583, LysR, Transcriptional regulator YP_003278962.1 COG2925, SbcB, Exonuclease I YP_003278963.1 COG1690, RtcB, Uncharacterized conserved protein YP_003278964.1 COG0679, Predicted permeases YP_003278965.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003278966.1 COG4977, Transcriptional regulator containing an amidasedomain and an AraC-type DNA-binding HTH domain YP_003278967.1 COG0300, DltE, Short-chain dehydrogenases of various substratespecificities YP_003278968.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003278969.1 COG2050, PaaI, Uncharacterized protein YP_003278970.1 COG0846, SIR2, NAD-dependent protein deacetylases YP_003278971.1 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003278972.1 COG3620, Predicted transcriptional regulator with C-terminal CBS domains YP_003278973.1 COG3605, PtsP, Signal transduction protein containing GAF and PtsIdomains YP_003278974.1 COG0179, MhpD, 2-keto-4-pentenoatehydratase/2-oxohepta-3-ene-1 YP_003278975.1 COG3473, Maleate cis-trans isomerase YP_003278976.1 COG2271, UhpC, Sugar phosphate permease YP_003278977.1 COG1680, AmpC, Beta-lactamase class C and other penicillin bindingproteins YP_003278978.1 COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases YP_003278979.1 COG4126, Hydantoin racemase YP_003278980.1 COG1802, GntR, Transcriptional regulators YP_003278981.1 COG2059, ChrA, Chromate transport protein ChrA YP_003278982.1 COG2059, ChrA, Chromate transport protein ChrA YP_003278983.1 COG0846, SIR2, NAD-dependent protein deacetylases YP_003278984.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003278985.1 COG0566, SpoU, rRNA methylases YP_003278986.1 COG3633, SstT, Na+/serine symporter YP_003278987.1 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis YP_003278988.1 COG2755, TesA, Lysophospholipase L1 and related esterases YP_003278989.1 COG5473, Predicted integral membrane protein YP_003278990.1 COG0626, MetC, Cystathionine beta-lyases/cystathioninegamma-synthases YP_003278991.1 COG2823, OsmY, Predicted periplasmic or secreted lipoprotein YP_003278992.1 COG2814, AraJ, Arabinose efflux permease YP_003278993.1 COG1752, RssA, Predicted esterase of the alpha-beta hydrolasesuperfamily YP_003278994.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003278995.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003278996.1 COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase YP_003278997.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003278998.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003278999.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003279000.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003279001.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003279002.1 COG1593, DctQ, TRAP-type C4-dicarboxylate transport system YP_003279003.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003279004.1 COG0020, UppS, Undecaprenyl pyrophosphate synthase YP_003279005.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003279006.1 COG0397, Uncharacterized conserved protein YP_003279007.1 COG0229, Conserved domain frequently associated withpeptide methionine sulfoxide reductase YP_003279008.1 COG2917, Intracellular septation protein A YP_003279009.1 COG0271, BolA, Stress-induced morphogen (activity unknown) YP_003279010.1 COG0760, SurA, Parvulin-like peptidyl-prolyl isomerase YP_003279011.1 COG5373, Predicted membrane protein YP_003279012.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003279013.1 COG0129, IlvD, Dihydroxyacid dehydratase/phosphogluconatedehydratase YP_003279014.1 COG1457, CodB, Purine-cytosine permease and related proteins YP_003279015.1 COG0666, Arp, FOG: Ankyrin repeat YP_003279016.1 COG3807, Uncharacterized protein conserved in bacteria YP_003279017.1 COG0351, ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidinekinase YP_003279018.1 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) YP_003279019.1 COG2104, ThiS, Sulfur transfer protein involved in thiamine biosynthesis YP_003279020.1 COG2022, ThiG, Uncharacterized enzyme of thiazole biosynthesis YP_003279021.1 COG0352, ThiE, Thiamine monophosphate synthase YP_003279022.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003279023.1 COG3173, Predicted aminoglycoside phosphotransferase YP_003279024.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003279025.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003279026.1 COG1186, PrfB, Protein chain release factor B YP_003279027.1 COG0308, PepN, Aminopeptidase N YP_003279028.1 COG2909, MalT, ATP-dependent transcriptional regulator YP_003279029.1 COG0158, Fbp, Fructose-1 YP_003279031.1 COG3287, Uncharacterized conserved protein YP_003279032.1 COG3664, XynB, Beta-xylosidase YP_003279033.1 COG3086, RseC, Positive regulator of sigma E activity YP_003279034.1 COG4678, Muramidase (phage lambda lysozyme) YP_003279035.1 COG1450, PulD, Type II secretory pathway YP_003279036.1 COG4325, Predicted membrane protein YP_003279037.1 COG0749, PolA, DNA polymerase I - 3'-5' exonuclease and polymerasedomains YP_003279038.1 COG0629, Ssb, Single-stranded DNA-binding protein YP_003279039.1 COG5519, Superfamily II helicase and inactivatedderivatives YP_003279040.1 COG1110, Reverse gyrase YP_003279041.1 COG4643, Uncharacterized protein conserved in bacteria YP_003279042.1 COG1185, Pnp, Polyribonucleotide nucleotidyltransferase(polynucleotide phosphorylase) YP_003279043.1 COG1486, CelF, Alpha-galactosidases/6-phospho-beta-glucosidases YP_003279044.1 COG1205, Distinct helicase family with a unique C-terminaldomain including a metal-binding cysteine cluster YP_003279045.1 COG2844, GlnD, UTP:GlnB (protein PII) uridylyltransferase YP_003279046.1 COG3917, NahD, 2-hydroxychromene-2-carboxylate isomerase YP_003279047.1 COG3636, Predicted transcriptional regulator YP_003279048.1 COG3657, Uncharacterized protein conserved in bacteria YP_003279049.1 COG4974, XerD, Site-specific recombinase XerD YP_003279050.1 COG3458, Acetyl esterase (deacetylase) YP_003279051.1 COG0361, InfA, Translation initiation factor 1 (IF-1) YP_003279052.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003279053.1 COG3359, Predicted exonuclease YP_003279054.1 COG0583, LysR, Transcriptional regulator YP_003279055.1 COG0385, Predicted Na+-dependent transporter YP_003279056.1 COG2200, Rtn, FOG: EAL domain YP_003279057.1 COG3672, Predicted periplasmic protein YP_003279058.1 COG2931, RTX toxins and related Ca2+-binding proteins YP_003279060.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003279061.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003279062.1 COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters YP_003279063.1 COG4126, Hydantoin racemase YP_003279064.1 COG1538, TolC, Outer membrane protein YP_003279065.1 COG3039, Transposase and inactivated derivatives YP_003279066.1 COG0789, SoxR, Predicted transcriptional regulators YP_003279067.1 COG0776, HimA, Bacterial nucleoid DNA-binding protein YP_003279068.1 COG0072, PheT, Phenylalanyl-tRNA synthetase beta subunit YP_003279069.1 COG0016, PheS, Phenylalanyl-tRNA synthetase alpha subunit YP_003279070.1 COG0292, RplT, Ribosomal protein L20 YP_003279071.1 COG0291, RpmI, Ribosomal protein L35 YP_003279072.1 COG0290, InfC, Translation initiation factor 3 (IF-3) YP_003279073.1 COG0441, ThrS, Threonyl-tRNA synthetase YP_003279074.1 COG2224, AceA, Isocitrate lyase YP_003279075.1 COG5006, Predicted permease YP_003279076.1 COG0684, MenG, Demethylmenaquinone methyltransferase YP_003279077.1 COG5531, SWIB-domain-containing proteins implicated inchromatin remodeling YP_003279078.1 COG3423, Nlp, Predicted transcriptional regulator YP_003279079.1 COG2944, Predicted transcriptional regulator YP_003279080.1 COG0369, CysJ, Sulfite reductase YP_003279081.1 COG1477, ApbE, Membrane-associated lipoprotein involved in thiaminebiosynthesis YP_003279082.1 COG5266, CbiK, ABC-type Co2+ transport system YP_003279083.1 COG3656, Predicted periplasmic protein YP_003279084.1 COG3295, Uncharacterized protein conserved in bacteria YP_003279085.1 COG4774, Fiu, Outer membrane receptor for monomeric catechols YP_003279086.1 COG3128, PiuC, Uncharacterized iron-regulated protein YP_003279087.1 COG1304, LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_003279088.1 COG2906, Bfd, Bacterioferritin-associated ferredoxin YP_003279089.1 COG0810, TonB, Periplasmic protein TonB YP_003279090.1 COG0811, TolQ, Biopolymer transport proteins YP_003279091.1 COG0848, ExbD, Biopolymer transport protein YP_003279092.1 COG4256, HemP, Hemin uptake protein YP_003279093.1 COG3193, GlcG, Uncharacterized protein YP_003279094.1 COG0670, Integral membrane protein YP_003279095.1 COG4258, Predicted exporter YP_003279097.1 COG5624, TAF61, Kinitiation factor TFIID YP_003279098.1 COG0605, SodA, Superoxide dismutase YP_003279099.1 COG0428, Predicted divalent heavy-metal cationstransporter YP_003279100.1 COG2265, TrmA, SAM-dependent methyltransferases related to tRNA(uracil-5-)-methyltransferase YP_003279101.1 COG0064, GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_003279102.1 COG1510, Predicted transcriptional regulators YP_003279103.1 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases YP_003279105.1 COG5528, Predicted integral membrane protein YP_003279106.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003279107.1 COG1522, Lrp, Transcriptional regulators YP_003279108.1 COG0506, PutA, Proline dehydrogenase YP_003279109.1 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase YP_003279110.1 COG3585, MopI, Molybdopterin-binding protein YP_003279111.1 COG0583, LysR, Transcriptional regulator YP_003279112.1 COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003279113.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003279114.1 COG2141, Coenzyme F420-dependent N5 YP_003279115.1 COG2141, Coenzyme F420-dependent N5 YP_003279116.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003279117.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003279118.1 COG0431, Predicted flavoprotein YP_003279119.1 COG1613, Sbp, ABC-type sulfate transport system YP_003279120.1 COG2924, Uncharacterized protein conserved in bacteria YP_003279121.1 COG2199, FOG: GGDEF domain YP_003279122.1 COG0583, LysR, Transcriptional regulator YP_003279123.1 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcoholdehydrogenases) YP_003279124.1 COG2867, Oligoketide cyclase/lipid transport protein YP_003279125.1 COG0402, SsnA, Cytosine deaminase and related metal-dependenthydrolases YP_003279126.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279127.1 COG1304, LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_003279128.1 COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003279129.1 COG3970, Fumarylacetoacetate (FAA) hydrolase familyprotein YP_003279130.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279131.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003279132.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003279133.1 COG3618, Predicted metal-dependent hydrolase of theTIM-barrel fold YP_003279134.1 COG0583, LysR, Transcriptional regulator YP_003279135.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003279136.1 COG2814, AraJ, Arabinose efflux permease YP_003279137.1 COG1454, EutG, Alcohol dehydrogenase YP_003279138.1 COG0583, LysR, Transcriptional regulator YP_003279139.1 COG1638, DctP, TRAP-type C4-dicarboxylate transport system YP_003279140.1 COG1593, DctQ, TRAP-type C4-dicarboxylate transport system YP_003279141.1 COG3090, DctM, TRAP-type C4-dicarboxylate transport system YP_003279142.1 COG2874, FlaH, Predicted ATPases involved in biogenesis of archaealflagella YP_003279143.1 COG1454, EutG, Alcohol dehydrogenase YP_003279144.1 COG0583, LysR, Transcriptional regulator YP_003279145.1 COG3479, Phenolic acid decarboxylase YP_003279146.1 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcoholdehydrogenases) YP_003279147.1 COG1902, NemA, NADH:flavin oxidoreductases YP_003279148.1 COG2141, Coenzyme F420-dependent N5 YP_003279149.1 COG0656, ARA1, Aldo/keto reductases YP_003279150.1 COG2814, AraJ, Arabinose efflux permease YP_003279151.1 COG2814, AraJ, Arabinose efflux permease YP_003279152.1 COG0583, LysR, Transcriptional regulator YP_003279153.1 COG0789, SoxR, Predicted transcriptional regulators YP_003279154.1 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases YP_003279155.1 COG4615, PvdE, ABC-type siderophore export system YP_003279156.1 COG2128, Uncharacterized conserved protein YP_003279157.1 COG1733, Predicted transcriptional regulators YP_003279158.1 COG0782, GreA, Kelongation factor YP_003279159.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279160.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003279161.1 COG1257, HMG1, Hydroxymethylglutaryl-CoA reductase YP_003279162.1 COG2391, Predicted transporter component YP_003279164.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003279165.1 COG2071, Predicted glutamine amidotransferases YP_003279166.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003279167.1 COG3712, FecR, Fe2+-dicitrate sensor YP_003279168.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003279169.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003279170.1 COG0730, Predicted permeases YP_003279171.1 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase YP_003279172.1 COG1309, AcrR, Transcriptional regulator YP_003279173.1 COG4222, Uncharacterized protein conserved in bacteria YP_003279174.1 COG3203, OmpC, Outer membrane protein (porin) YP_003279175.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003279176.1 COG0583, LysR, Transcriptional regulator YP_003279177.1 COG2072, TrkA, Predicted flavoprotein involved in K+ transport YP_003279178.1 COG2814, AraJ, Arabinose efflux permease YP_003279179.1 COG0431, Predicted flavoprotein YP_003279180.1 COG1393, ArsC, Arsenate reductase and related proteins YP_003279181.1 COG1055, ArsB, Na+/H+ antiporter NhaD and related arsenitepermeases YP_003279182.1 COG0394, Wzb, Protein-tyrosine-phosphatase YP_003279183.1 COG0640, ArsR, Predicted transcriptional regulators YP_003279184.1 COG3607, Predicted lactoylglutathione lyase YP_003279185.1 COG3662, Uncharacterized protein conserved in bacteria YP_003279186.1 COG1942, Uncharacterized protein YP_003279187.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279188.1 COG3971, 2-keto-4-pentenoate hydratase YP_003279189.1 COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases YP_003279190.1 COG4569, MhpF, Acetaldehyde dehydrogenase (acetylating) YP_003279191.1 COG3971, 2-keto-4-pentenoate hydratase YP_003279192.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003279193.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003279194.1 COG0583, LysR, Transcriptional regulator YP_003279195.1 COG3193, GlcG, Uncharacterized protein YP_003279196.1 COG4313, Protein involved in meta-pathway of phenoldegradation YP_003279197.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003279198.1 COG2871, NqrF, Na+-transporting NADH:ubiquinone oxidoreductase YP_003279199.1 COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_003279200.1 COG0190, FolD, 5 YP_003279201.1 COG3350, Uncharacterized conserved protein YP_003279202.1 COG3748, Predicted membrane protein YP_003279203.1 COG5210, GTPase-activating protein YP_003279204.1 COG0096, RpsH, Ribosomal protein S8 YP_003279205.1 COG3829, RocR, Transcriptional regulator containing PAS YP_003279206.1 COG1802, GntR, Transcriptional regulators YP_003279207.1 COG3072, CyaA, Adenylate cyclase YP_003279208.1 COG2831, FhaC, Hemolysin activation/secretion protein YP_003279209.1 COG2860, Predicted membrane protein YP_003279210.1 COG4121, Uncharacterized conserved protein YP_003279211.1 COG1253, TlyC, Hemolysins and related proteins containing CBSdomains YP_003279212.1 COG0155, CysI, Sulfite reductase YP_003279213.1 COG3749, Uncharacterized protein conserved in bacteria YP_003279214.1 COG0175, CysH, 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase (PAPS reductase)/FAD synthetase andrelated enzymes YP_003279215.1 COG0175, CysH, 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase (PAPS reductase)/FAD synthetase andrelated enzymes YP_003279216.1 COG2895, CysN, GTPases - Sulfate adenylate transferase subunit 1 YP_003279217.1 COG1146, Ferredoxin YP_003279218.1 COG0492, TrxB, Thioredoxin reductase YP_003279219.1 COG2233, UraA, Xanthine/uracil permeases YP_003279220.1 COG0242, Def, N-formylmethionyl-tRNA deformylase YP_003279221.1 COG0708, XthA, Exonuclease III YP_003279222.1 COG2081, Predicted flavoproteins YP_003279223.1 COG3118, Thioredoxin domain-containing protein YP_003279224.1 COG1158, Rho, Ktermination factor YP_003279225.1 COG1538, TolC, Outer membrane protein YP_003279226.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003279227.1 COG1131, CcmA, ABC-type multidrug transport system YP_003279228.1 COG0842, ABC-type multidrug transport system YP_003279229.1 COG2251, Predicted nuclease (RecB family) YP_003279230.1 COG0282, ackA, Acetate kinase YP_003279231.1 COG0280, Pta, Phosphotransacetylase YP_003279232.1 COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase YP_003279233.1 COG4308, LimA, Limonene-1 YP_003279234.1 COG2268, Uncharacterized protein conserved in bacteria YP_003279235.1 COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase YP_003279236.1 COG0254, RpmE, Ribosomal protein L31 YP_003279237.1 COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_003279238.1 COG0534, NorM, Na+-driven multidrug efflux pump YP_003279239.1 COG5002, VicK, Signal transduction histidine kinase YP_003279240.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003279241.1 COG0704, PhoU, Phosphate uptake regulator YP_003279242.1 COG1117, PstB, ABC-type phosphate transport system YP_003279243.1 COG0581, PstA, ABC-type phosphate transport system YP_003279244.1 COG0573, PstC, ABC-type phosphate transport system YP_003279245.1 COG0226, PstS, ABC-type phosphate transport system YP_003279246.1 COG0248, GppA, Exopolyphosphatase YP_003279247.1 COG0855, Ppk, Polyphosphate kinase YP_003279248.1 COG1109 YP_003279249.1 COG0294, FolP, Dihydropteroate synthase and related enzymes YP_003279250.1 COG0465, HflB, ATP-dependent Zn proteases YP_003279251.1 COG0293, FtsJ, 23S rRNA methylase YP_003279252.1 COG1534, Predicted RNA-binding protein containing KH domain YP_003279253.1 COG3868, Uncharacterized conserved protein YP_003279254.1 COG1523, PulA, Type II secretory pathway YP_003279255.1 COG0728, MviN, Uncharacterized membrane protein YP_003279256.1 COG0782, GreA, Kelongation factor YP_003279257.1 COG0458, CarB, Carbamoylphosphate synthase large subunit (splitgene in MJ) YP_003279258.1 COG0505, CarA, Carbamoylphosphate synthase small subunit YP_003279259.1 COG0566, SpoU, rRNA methylases YP_003279260.1 COG0164, RnhB, Ribonuclease HII YP_003279261.1 COG0763, LpxB, Lipid A disaccharide synthetase YP_003279263.1 COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrierprotein) dehydratases YP_003279265.1 COG2825, HlpA, Outer membrane protein YP_003279266.1 COG4775, Outer membrane protein/protective antigen OMA87 YP_003279267.1 COG0750, Predicted membrane-associated Zn-dependentproteases 1 YP_003279268.1 COG0743, Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003279269.1 COG0575, CdsA, CDP-diglyceride synthetase YP_003279270.1 COG0020, UppS, Undecaprenyl pyrophosphate synthase YP_003279271.1 COG0233, Frr, Ribosome recycling factor YP_003279272.1 COG0528, PyrH, Uridylate kinase YP_003279273.1 COG0264, Tsf, Translation elongation factor Ts YP_003279274.1 COG0052, RpsB, Ribosomal protein S2 YP_003279275.1 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunitand related amidases YP_003279276.1 COG0379, NadA, Quinolinate synthase YP_003279277.1 COG0063, Predicted sugar kinase YP_003279279.1 COG0419, SbcC, ATPase involved in DNA repair YP_003279280.1 COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis YP_003279281.1 COG0741, MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003279282.1 COG0112, GlyA, Glycine/serine hydroxymethyltransferase YP_003279283.1 COG1327, Predicted transcriptional regulator YP_003279284.1 COG0737, UshA, 5'-nucleotidase/2' YP_003279285.1 COG0082, AroC, Chorismate synthase YP_003279286.1 COG2704, DcuB, Anaerobic C4-dicarboxylate transporter YP_003279287.1 COG0517, FOG: CBS domain YP_003279288.1 COG2873, MET17, O-acetylhomoserine sulfhydrylase YP_003279289.1 similar to ESA_02188; COG4625, Uncharacterized protein with a C-terminal OMP(outer membrane protein) domain YP_003279290.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003279291.1 COG3981, Predicted acetyltransferase YP_003279293.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003279294.1 COG4323, Predicted membrane protein YP_003279295.1 COG1295, Rbn, Predicted membrane protein YP_003279296.1 COG3308, Predicted membrane protein YP_003279297.1 COG0583, LysR, Transcriptional regulator YP_003279298.1 COG0277, GlcD, FAD/FMN-containing dehydrogenases YP_003279299.1 COG3245, CycB, Cytochrome c5 YP_003279300.1 COG0207, ThyA, Thymidylate synthase YP_003279301.1 COG0262, FolA, Dihydrofolate reductase YP_003279302.1 COG3855, Fbp, Uncharacterized protein conserved in bacteria YP_003279303.1 COG3042, Hlx, Putative hemolysin YP_003279304.1 COG0583, LysR, Transcriptional regulator YP_003279305.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279306.1 COG3119, AslA, Arylsulfatase A and related enzymes YP_003279307.1 COG3203, OmpC, Outer membrane protein (porin) YP_003279308.1 COG0708, XthA, Exonuclease III YP_003279309.1 COG3725, AmpE, Membrane protein required for beta-lactamaseinduction YP_003279310.1 COG2204, AtoC, Response regulator containing CheY-like receiver YP_003279311.1 COG3852, NtrB, Signal transduction histidine kinase YP_003279312.1 COG2433, Uncharacterized conserved protein YP_003279313.1 COG0174, GlnA, Glutamine synthetase YP_003279316.1 COG0726, CDA1, Predicted xylanase/chitin deacetylase YP_003279317.1 COG3391, Uncharacterized conserved protein YP_003279318.1 COG2236, Predicted phosphoribosyltransferases YP_003279319.1 COG0104, PurA, Adenylosuccinate synthase YP_003279320.1 COG3705, HisZ, ATP phosphoribosyltransferase involved in histidinebiosynthesis YP_003279321.1 COG3242, Uncharacterized protein conserved in bacteria YP_003279322.1 COG0330, HflC, Membrane protease subunits YP_003279323.1 COG0330, HflC, Membrane protease subunits YP_003279324.1 COG2262, HflX, GTPases YP_003279325.1 COG1923, Hfq, Uncharacterized host factor I protein YP_003279326.1 COG1160, Predicted GTPases YP_003279327.1 COG1520, FOG: WD40-like repeat YP_003279328.1 COG2976, Uncharacterized protein conserved in bacteria YP_003279329.1 COG0124, HisS, Histidyl-tRNA synthetase YP_003279330.1 COG0821, GcpE, Enzyme involved in the deoxyxylulose pathway ofisoprenoid biosynthesis YP_003279331.1 COG1426, Uncharacterized protein conserved in bacteria YP_003279332.1 COG3063, PilF, Tfp pilus assembly protein PilF YP_003279333.1 COG0820, Predicted Fe-S-cluster redox enzyme YP_003279334.1 COG0105, Ndk, Nucleoside diphosphate kinase YP_003279335.1 COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase andrelated pseudouridylate synthases YP_003279336.1 COG1386, Predicted transcriptional regulator containingthe HTH domain YP_003279337.1 COG0564, RluA, Pseudouridylate synthases YP_003279338.1 COG0739, NlpD, Membrane proteins related to metalloendopeptidases YP_003279339.1 COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase YP_003279340.1 COG0496, SurE, Predicted acid phosphatase YP_003279341.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003279342.1 COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D YP_003279343.1 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_003279344.1 COG1252, Ndh, NADH dehydrogenase YP_003279345.1 COG4691, StbC, Plasmid stability protein YP_003279346.1 COG0024, Map, Methionine aminopeptidase YP_003279347.1 COG2076, EmrE, Membrane transporters of cations and cationic drugs YP_003279348.1 COG0400, Predicted esterase YP_003279349.1 COG1186, PrfB, Protein chain release factor B YP_003279350.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003279351.1 COG0757, AroQ, 3-dehydroquinate dehydratase II YP_003279353.1 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synthetases YP_003279354.1 COG5339, Uncharacterized protein conserved in bacteria YP_003279355.1 COG4372, Uncharacterized protein conserved in bacteriawith the myosin-like domain YP_003279356.1 COG2808, PaiB, Transcriptional regulator YP_003279357.1 COG0739, NlpD, Membrane proteins related to metalloendopeptidases YP_003279358.1 COG3380, Predicted NAD/FAD-dependent oxidoreductase YP_003279359.1 COG3187, HslJ, Heat shock protein YP_003279360.1 COG5470, Uncharacterized conserved protein YP_003279361.1 COG2814, AraJ, Arabinose efflux permease YP_003279362.1 COG3804, Uncharacterized conserved protein related todihydrodipicolinate reductase YP_003279363.1 COG2962, RarD, Predicted permeases YP_003279364.1 COG0564, RluA, Pseudouridylate synthases YP_003279365.1 COG2404, Predicted phosphohydrolase (DHH superfamily) YP_003279366.1 COG1473, AbgB, Metal-dependentamidase/aminoacylase/carboxypeptidase YP_003279367.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003279368.1 COG1161, Predicted GTPases YP_003279369.1 COG0341, SecF, Preprotein translocase subunit SecF YP_003279370.1 COG1410, MetH, Methionine synthase I YP_003279371.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003279372.1 COG2918, GshA, Gamma-glutamylcysteine synthetase YP_003279373.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003279375.1 COG0633, Fdx, Ferredoxin YP_003279376.1 COG0108, RibB, 3 YP_003279377.1 COG0054, RibH, Riboflavin synthase beta-chain YP_003279378.1 COG0781, NusB, Ktermination factor YP_003279379.1 COG0436, Aspartate/tyrosine/aromatic aminotransferase YP_003279380.1 COG0824, FcbC, Predicted thioesterase YP_003279381.1 COG0811, TolQ, Biopolymer transport proteins YP_003279382.1 COG0848, ExbD, Biopolymer transport protein YP_003279383.1 COG2268, Uncharacterized protein conserved in bacteria YP_003279384.1 COG1690, RtcB, Uncharacterized conserved protein YP_003279385.1 COG1186, PrfB, Protein chain release factor B YP_003279386.1 COG0730, Predicted permeases YP_003279387.1 COG0583, LysR, Transcriptional regulator YP_003279388.1 COG0826, Collagenase and related proteases YP_003279389.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003279390.1 COG1414, IclR, Transcriptional regulator YP_003279391.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279392.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003279393.1 COG0372, GltA, Citrate synthase YP_003279394.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003279395.1 COG4772, FecA, Outer membrane receptor for Fe3+-dicitrate YP_003279396.1 COG3182, PiuB, Uncharacterized iron-regulated membrane protein YP_003279397.1 COG3324, Predicted enzyme related to lactoylglutathionelyase YP_003279398.1 COG1048, AcnA, Aconitase A YP_003279399.1 COG1048, AcnA, Aconitase A YP_003279400.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003279401.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279402.1 COG1473, AbgB, Metal-dependentamidase/aminoacylase/carboxypeptidase YP_003279403.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279404.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279405.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003279406.1 COG0583, LysR, Transcriptional regulator YP_003279407.1 COG4126, Hydantoin racemase YP_003279408.1 COG1953, FUI1, Cytosine/uracil/thiamine/allantoin permeases YP_003279409.1 COG3704, VirB6, Type IV secretory pathway YP_003279410.1 COG1802, GntR, Transcriptional regulators YP_003279411.1 COG1802, GntR, Transcriptional regulators YP_003279412.1 COG0726, CDA1, Predicted xylanase/chitin deacetylase YP_003279413.1 COG2193, Bfr, Bacterioferritin (cytochrome b1) YP_003279414.1 COG1738, Uncharacterized conserved protein YP_003279415.1 COG3747, Phage terminase YP_003279417.1 COG1396, HipB, Predicted transcriptional regulators YP_003279418.1 COG1802, GntR, Transcriptional regulators YP_003279419.1 COG3203, OmpC, Outer membrane protein (porin) YP_003279420.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279421.1 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases YP_003279423.1 COG0251, TdcF, Putative translation initiation inhibitor YP_003279424.1 COG0277, GlcD, FAD/FMN-containing dehydrogenases YP_003279425.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279426.1 COG1049, AcnB, Aconitase B YP_003279427.1 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunitand related amidases YP_003279428.1 COG2301, CitE, Citrate lyase beta subunit YP_003279429.1 COG4106, Tam, Trans-aconitate methyltransferase YP_003279430.1 COG0039, Mdh, Malate/lactate dehydrogenases YP_003279431.1 COG2188, PhnF, Transcriptional regulators YP_003279432.1 COG2009, SdhC, Succinate dehydrogenase/fumarate reductase YP_003279433.1 COG2142, SdhD, Succinate dehydrogenase YP_003279434.1 COG1053, SdhA, Succinate dehydrogenase/fumarate reductase YP_003279435.1 COG0479, FrdB, Succinate dehydrogenase/fumarate reductase YP_003279436.1 COG2938, Uncharacterized conserved protein YP_003279437.1 COG0372, GltA, Citrate synthase YP_003279438.1 COG2069, CdhD, CO dehydrogenase/acetyl-CoA synthase delta subunit(corrinoid Fe-S protein) YP_003279439.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003279440.1 COG0513, SrmB, Superfamily II DNA and RNA helicases YP_003279441.1 COG4455, ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion YP_003279442.1 COG1112, Superfamily I DNA and RNA helicases and helicase subunits YP_003279443.1 COG1612, CtaA, Uncharacterized protein required for cytochromeoxidase assembly YP_003279444.1 COG3620, Predicted transcriptional regulator with C-terminal CBS domains YP_003279445.1 COG4977, Transcriptional regulator containing an amidasedomain and an AraC-type DNA-binding HTH domain YP_003279446.1 COG0038, EriC, Chloride channel protein EriC YP_003279447.1 COG1062, AdhC, Zn-dependent alcohol dehydrogenases YP_003279448.1 COG0627, Predicted esterase YP_003279449.1 COG4628, Uncharacterized conserved protein YP_003279450.1 COG1917, Uncharacterized conserved protein YP_003279451.1 COG1359, Uncharacterized conserved protein YP_003279452.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003279453.1 COG1846, MarR, Transcriptional regulators YP_003279454.1 COG0637, Predicted phosphatase/phosphohexomutase YP_003279455.1 COG1454, EutG, Alcohol dehydrogenase YP_003279456.1 COG3639, ABC-type phosphate/phosphonate transport system YP_003279457.1 COG3638, ABC-type phosphate/phosphonate transport system YP_003279458.1 COG3221, PhnD, ABC-type phosphate/phosphonate transport system YP_003279459.1 COG0583, LysR, Transcriptional regulator YP_003279460.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279461.1 COG1533, SplB, DNA repair photolyase YP_003279462.1 COG0782, GreA, Kelongation factor YP_003279463.1 COG1835, Predicted acyltransferases YP_003279464.1 COG1510, Predicted transcriptional regulators YP_003279465.1 COG1609, PurR, Transcriptional regulators YP_003279466.1 COG3265, GntK, Gluconate kinase YP_003279467.1 COG3090, DctM, TRAP-type C4-dicarboxylate transport system YP_003279468.1 COG1593, DctQ, TRAP-type C4-dicarboxylate transport system YP_003279469.1 COG1638, DctP, TRAP-type C4-dicarboxylate transport system YP_003279470.1 COG0129, IlvD, Dihydroxyacid dehydratase/phosphogluconatedehydratase YP_003279471.1 COG0800, Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase YP_003279472.1 COG4890, Predicted outer membrane lipoprotein YP_003279473.1 COG1294, AppB, Cytochrome bd-type quinol oxidase YP_003279474.1 COG1271, CydA, Cytochrome bd-type quinol oxidase YP_003279475.1 COG4987, CydC, ABC-type transport system involved in cytochrome bdbiosynthesis YP_003279476.1 COG4988, CydD, ABC-type transport system involved in cytochrome bdbiosynthesis YP_003279477.1 COG2070, Dioxygenases related to 2-nitropropanedioxygenase YP_003279478.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003279479.1 COG2025, FixB, Electron transfer flavoprotein YP_003279480.1 COG2086, FixA, Electron transfer flavoprotein YP_003279481.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003279482.1 COG0123, AcuC, Deacetylases YP_003279483.1 COG0714, MoxR-like ATPases YP_003279484.1 COG1721, Uncharacterized conserved protein (some memberscontain a von Willebrand factor type A (vWA) domain) YP_003279485.1 COG1305, Transglutaminase-like enzymes YP_003279486.1 COG2951, MltB, Membrane-bound lytic murein transglycosylase B YP_003279487.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003279488.1 COG0071, IbpA, Molecular chaperone (small heat shock protein) YP_003279489.1 COG0655, WrbA, Multimeric flavodoxin WrbA YP_003279490.1 COG0533, QRI7, Metal-dependent proteases with possible chaperoneactivity YP_003279491.1 COG0517, FOG: CBS domain YP_003279492.1 COG5403, Uncharacterized conserved protein YP_003279493.1 COG3203, OmpC, Outer membrane protein (porin) YP_003279494.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279495.1 COG1649, Uncharacterized protein conserved in bacteria YP_003279496.1 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependentdehydrogenases YP_003279497.1 COG0583, LysR, Transcriptional regulator YP_003279498.1 COG0547, TrpD, Anthranilate phosphoribosyltransferase YP_003279499.1 COG0007, CysG, Uroporphyrinogen-III methylase YP_003279500.1 COG1607, Acyl-CoA hydrolase YP_003279501.1 COG3379, Uncharacterized conserved protein YP_003279502.1 COG2081, Predicted flavoproteins YP_003279503.1 COG1744, Med, Uncharacterized ABC-type transport system YP_003279504.1 COG0828, RpsU, Ribosomal protein S21 YP_003279505.1 COG1610, Uncharacterized conserved protein YP_003279506.1 COG0583, LysR, Transcriptional regulator YP_003279507.1 COG0473, LeuB, Isocitrate/isopropylmalate dehydrogenase YP_003279508.1 COG5649, Uncharacterized conserved protein YP_003279509.1 COG0583, LysR, Transcriptional regulator YP_003279510.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279511.1 COG2721, UxaA, Altronate dehydratase YP_003279512.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003279513.1 COG3836, HpcH, 2 YP_003279514.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003279515.1 COG5006, Predicted permease YP_003279517.1 COG1735, Php, Predicted metal-dependent hydrolase with theTIM-barrel fold YP_003279518.1 COG0312, TldD, Predicted Zn-dependent proteases and theirinactivated homologs YP_003279519.1 COG3028, Uncharacterized protein conserved in bacteria YP_003279520.1 COG0521, MoaB, Molybdopterin biosynthesis enzymes YP_003279521.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003279522.1 COG0422, ThiC, Thiamine biosynthesis protein ThiC YP_003279523.1 COG3281, Ble, Uncharacterized protein YP_003279524.1 COG0778, NfnB, Nitroreductase YP_003279525.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003279526.1 COG0778, NfnB, Nitroreductase YP_003279527.1 COG1045, CysE, Serine acetyltransferase YP_003279528.1 COG0565, LasT, rRNA methylase YP_003279529.1 COG0483, SuhB, Archaeal fructose-1 YP_003279531.1 COG0249, MutS, Mismatch repair ATPase (MutS family) YP_003279532.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003279533.1 COG3484, Predicted proteasome-type protease YP_003279534.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003279535.1 COG1968, BacA, Uncharacterized bacitracin resistance protein YP_003279537.1 COG3182, PiuB, Uncharacterized iron-regulated membrane protein YP_003279538.1 COG4774, Fiu, Outer membrane receptor for monomeric catechols YP_003279539.1 COG5395, Predicted membrane protein YP_003279540.1 COG1280, RhtB, Putative threonine efflux protein YP_003279541.1 COG3275, LytS, Putative regulator of cell autolysis YP_003279542.1 COG3279, LytT, Response regulator of the LytR/AlgR family YP_003279543.1 COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transportsystems YP_003279544.1 COG4548, NorD, Nitric oxide reductase activation protein YP_003279545.1 COG3832, Uncharacterized conserved protein YP_003279546.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003279547.1 COG1538, TolC, Outer membrane protein YP_003279548.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003279549.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003279550.1 COG0845, AcrA, Membrane-fusion protein YP_003279551.1 COG4167, SapF, ABC-type antimicrobial peptide transport system YP_003279552.1 COG3427, Uncharacterized conserved protein YP_003279553.1 COG3552, CoxE, Protein containing von Willebrand factor type A(vWA) domain YP_003279554.1 COG0714, MoxR-like ATPases YP_003279555.1 COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase YP_003279556.1 COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase YP_003279557.1 COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase YP_003279558.1 COG3284, AcoR, Transcriptional activator of acetoin/glycerolmetabolism YP_003279559.1 COG4665, FcbT2, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003279560.1 COG4664, FcbT3, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003279561.1 COG1957, URH1, Inosine-uridine nucleoside N-ribohydrolase YP_003279562.1 COG4663, FcbT1, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003279563.1 COG4663, FcbT1, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003279564.1 COG4663, FcbT1, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003279565.1 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase YP_003279566.1 COG0142, IspA, Geranylgeranyl pyrophosphate synthase YP_003279567.1 COG1722, XseB, Exonuclease VII small subunit YP_003279568.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003279569.1 COG5006, Predicted permease YP_003279570.1 COG2897, SseA, Rhodanese-related sulfurtransferase YP_003279571.1 COG1406, Predicted inhibitor of MCP methylation YP_003279572.1 COG2192, Predicted carbamoyl transferase YP_003279573.1 COG2352, Ppc, Phosphoenolpyruvate carboxylase YP_003279574.1 COG0181, HemC, Porphobilinogen deaminase YP_003279575.1 COG1587, HemD, Uroporphyrinogen-III synthase YP_003279576.1 COG2959, HemX, Uncharacterized enzyme of heme biosynthesis YP_003279577.1 COG3071, HemY, Uncharacterized enzyme of heme biosynthesis YP_003279578.1 COG2010, CccA, Cytochrome c YP_003279579.1 COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase YP_003279580.1 COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase YP_003279581.1 COG3038, CybB, Cytochrome B561 YP_003279582.1 COG2353, Uncharacterized conserved protein YP_003279583.1 COG2353, Uncharacterized conserved protein YP_003279584.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003279585.1 COG0525, ValS, Valyl-tRNA synthetase YP_003279586.1 COG1210, GalU, UDP-glucose pyrophosphorylase YP_003279587.1 COG0425, SirA, Predicted redox protein YP_003279588.1 COG2816, NPY1, NTP pyrophosphohydrolases containing a Zn-finger YP_003279589.1 COG0031, CysK, Cysteine synthase YP_003279590.1 COG1974, LexA, SOS-response transcriptional repressors(RecA-mediated autopeptidases) YP_003279591.1 COG0389, DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003279592.1 COG5110, RPN1, 26S proteasome regulatory complex component YP_003279593.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003279594.1 COG3772, Phage-related lysozyme (muraminidase) YP_003279595.1 COG5293, Uncharacterized protein conserved in bacteria YP_003279596.1 COG5624, TAF61, Kinitiation factor TFIID YP_003279597.1 COG4932, Predicted outer membrane protein YP_003279598.1 COG2045, Phosphosulfolactate phosphohydrolase and related enzymes YP_003279599.1 COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) YP_003279600.1 COG5449, Uncharacterized conserved protein YP_003279601.1 COG5448, Uncharacterized conserved protein YP_003279602.1 COG5281, Phage-related minor tail protein YP_003279603.1 COG0337, AroB, 3-dehydroquinate synthetase YP_003279604.1 COG0003, ArsA, Predicted ATPase involved in chromosome partitioning YP_003279605.1 COG0783, Dps, DNA-binding ferritin-like protein (oxidative damageprotectant) YP_003279606.1 COG3573, Predicted oxidoreductase YP_003279607.1 COG0188, GyrA, Type IIA topoisomerase (DNA gyrase/topo II YP_003279608.1 COG5471, Uncharacterized conserved protein YP_003279609.1 COG0740, ClpP, Protease subunit of ATP-dependent Clp proteases YP_003279611.1 COG5511, Bacteriophage capsid protein YP_003279612.1 COG0674, PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases YP_003279613.1 COG5566, Uncharacterized conserved protein YP_003279614.1 COG5525, Bacteriophage tail assembly protein YP_003279615.1 COG4220, Phage DNA packaging protein YP_003279616.1 COG3756, Uncharacterized protein conserved in bacteria YP_003279617.1 COG3250, LacZ, Beta-galactosidase/beta-glucuronidase YP_003279618.1 COG5204, SPT4, Kelongation factor SPT4 YP_003279620.1 COG1554, ATH1, Trehalose and maltose hydrolases (possiblephosphorylases) YP_003279623.1 similar to DaciDRAFT_0003; COG4728, Uncharacterized protein conserved in bacteria YP_003279624.1 COG2932, Predicted transcriptional regulator YP_003279625.1 COG1755, Uncharacterized protein conserved in bacteria YP_003279626.1 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Znfinger domain YP_003279627.1 COG5522, Predicted integral membrane protein YP_003279628.1 COG5385, Uncharacterized protein conserved in bacteria YP_003279630.1 COG3375, Uncharacterized conserved protein YP_003279631.1 COG0563, Adk, Adenylate kinase and related kinases YP_003279632.1 COG5194, APC11, Component of SCF ubiquitin ligase and anaphase-promoting complex YP_003279633.1 COG2995, PqiA, Uncharacterized paraquat-inducible protein A YP_003279634.1 COG4888, Uncharacterized Zn ribbon-containing protein YP_003279635.1 COG1069, AraB, Ribulose kinase YP_003279636.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003279637.1 COG4868, Uncharacterized protein conserved in bacteria YP_003279638.1 COG0856, Orotate phosphoribosyltransferase homologs YP_003279639.1 COG0422, ThiC, Thiamine biosynthesis protein ThiC YP_003279640.1 COG1496, Uncharacterized conserved protein YP_003279641.1 COG3311, AlpA, Predicted transcriptional regulator YP_003279642.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003279644.1 COG5352, Uncharacterized protein conserved in bacteria YP_003279645.1 COG3111, Uncharacterized conserved protein YP_003279646.1 COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-Soxidoreductases YP_003279647.1 COG1380, Putative effector of murein hydrolase LrgA YP_003279648.1 COG1346, LrgB, Putative effector of murein hydrolase YP_003279649.1 COG5006, Predicted permease YP_003279650.1 COG0583, LysR, Transcriptional regulator YP_003279653.1 COG0819, TenA, Putative Kactivator YP_003279654.1 COG0583, LysR, Transcriptional regulator YP_003279655.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003279656.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003279657.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279658.1 COG3203, OmpC, Outer membrane protein (porin) YP_003279659.1 COG2814, AraJ, Arabinose efflux permease YP_003279660.1 COG2910, Putative NADH-flavin reductase YP_003279661.1 COG0583, LysR, Transcriptional regulator YP_003279662.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003279663.1 COG0054, RibH, Riboflavin synthase beta-chain YP_003279664.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003279665.1 COG3064, TolA, Membrane protein involved in colicin uptake YP_003279666.1 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases YP_003279667.1 COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_003279668.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279669.1 COG0801, FolK, 7 YP_003279670.1 COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase YP_003279671.1 COG0560, SerB, Phosphoserine phosphatase YP_003279672.1 COG0593, DnaA, ATPase involved in DNA replication initiation YP_003279673.1 COG0150, PurM, Phosphoribosylaminoimidazole (AIR) synthetase YP_003279674.1 COG0628, PerM, Predicted permease YP_003279675.1 COG2912, Uncharacterized conserved protein YP_003279676.1 COG0728, MviN, Uncharacterized membrane protein YP_003279677.1 COG0268, RpsT, Ribosomal protein S20 YP_003279678.1 COG0579, Predicted dehydrogenase YP_003279679.1 COG0534, NorM, Na+-driven multidrug efflux pump YP_003279680.1 COG3383, Uncharacterized anaerobic dehydrogenase YP_003279681.1 COG4992, ArgD, Ornithine/acetylornithine aminotransferase YP_003279682.1 COG0078, ArgF, Ornithine carbamoyltransferase YP_003279683.1 COG5612, Predicted integral membrane protein YP_003279684.1 COG0727, Predicted Fe-S-cluster oxidoreductase YP_003279685.1 COG1429, CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases YP_003279686.1 COG0370, FeoB, Fe2+ transport system protein B YP_003279687.1 COG1918, FeoA, Fe2+ transport system protein A YP_003279688.1 COG0727, Predicted Fe-S-cluster oxidoreductase YP_003279689.1 COG0631, PTC1, Serine/threonine protein phosphatase YP_003279690.1 COG1280, RhtB, Putative threonine efflux protein YP_003279691.1 COG4977, Transcriptional regulator containing an amidasedomain and an AraC-type DNA-binding HTH domain YP_003279692.1 COG1113, AnsP, Gamma-aminobutyrate permease and related permeases YP_003279693.1 COG1878, Predicted metal-dependent hydrolase YP_003279694.1 COG3844, Kynureninase YP_003279695.1 COG1620, LldP, L-lactate permease YP_003279696.1 COG1396, HipB, Predicted transcriptional regulators YP_003279697.1 COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNAglycosylase YP_003279698.1 COG0350, Ada, Methylated DNA-protein cysteine methyltransferase YP_003279699.1 COG3483, TDO2, Tryptophan 2 YP_003279700.1 COG2814, AraJ, Arabinose efflux permease YP_003279701.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003279702.1 COG2916, Hns, DNA-binding protein H-NS YP_003279703.1 COG1253, TlyC, Hemolysins and related proteins containing CBSdomains YP_003279705.1 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_003279706.1 COG0513, SrmB, Superfamily II DNA and RNA helicases YP_003279707.1 COG2321, Predicted metal loprotease YP_003279708.1 COG2981, CysZ, Uncharacterized protein involved in cysteinebiosynthesis YP_003279709.1 COG2423, Predicted ornithine cyclodeaminase YP_003279710.1 COG0379, NadA, Quinolinate synthase YP_003279711.1 COG0029, NadB, Aspartate oxidase YP_003279712.1 COG0029, NadB, Aspartate oxidase YP_003279713.1 COG0717, Dcd, Deoxycytidine deaminase YP_003279714.1 COG0402, SsnA, Cytosine deaminase and related metal-dependenthydrolases YP_003279715.1 COG0583, LysR, Transcriptional regulator YP_003279716.1 COG2175, TauD, Probable taurine catabolism dioxygenase YP_003279717.1 COG1304, LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_003279718.1 COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and otherHIT family hydrolases YP_003279719.1 COG1816, Add, Adenosine deaminase YP_003279720.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003279721.1 COG1744, Med, Uncharacterized ABC-type transport system YP_003279722.1 COG1744, Med, Uncharacterized ABC-type transport system YP_003279723.1 COG1079, Uncharacterized ABC-type transport system YP_003279724.1 COG4603, ABC-type uncharacterized transport system YP_003279725.1 COG3845, ABC-type uncharacterized transport systems YP_003279726.1 COG0583, LysR, Transcriptional regulator YP_003279727.1 COG2199, FOG: GGDEF domain YP_003279728.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003279729.1 COG1629, CirA, Outer membrane receptor proteins YP_003279730.1 COG3712, FecR, Fe2+-dicitrate sensor YP_003279731.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003279732.1 COG1629, CirA, Outer membrane receptor proteins YP_003279733.1 COG4607, CeuA, ABC-type enterochelin transport system YP_003279734.1 COG4604, CeuD, ABC-type enterochelin transport system YP_003279735.1 COG4605, CeuC, ABC-type enterochelin transport system YP_003279736.1 COG4606, CeuB, ABC-type enterochelin transport system YP_003279737.1 COG1132, MdlB, ABC-type multidrug transport system YP_003279738.1 COG1132, MdlB, ABC-type multidrug transport system YP_003279739.1 COG1132, MdlB, ABC-type multidrug transport system YP_003279740.1 COG1309, AcrR, Transcriptional regulator YP_003279741.1 COG3576, Predicted flavin-nucleotide-binding proteinstructurally related to pyridoxine 5'-phosphate oxidase YP_003279742.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003279743.1 COG3748, Predicted membrane protein YP_003279744.1 COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor YP_003279745.1 COG3696, Putative silver efflux pump YP_003279746.1 COG2930, Uncharacterized conserved protein YP_003279747.1 COG2259, Predicted membrane protein YP_003279748.1 COG2351, Transthyretin-like protein YP_003279749.1 COG0405, Ggt, Gamma-glutamyltransferase YP_003279750.1 COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003279751.1 COG3622, Hfi, Hydroxypyruvate isomerase YP_003279752.1 COG3960, Glyoxylate carboligase YP_003279753.1 COG0583, LysR, Transcriptional regulator YP_003279754.1 COG2379, GckA, Putative glycerate kinase YP_003279755.1 COG1802, GntR, Transcriptional regulators YP_003279756.1 COG1802, GntR, Transcriptional regulators YP_003279757.1 COG0726, CDA1, Predicted xylanase/chitin deacetylase YP_003279758.1 COG3195, Uncharacterized protein conserved in bacteria YP_003279759.1 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelatedesuccinylase and related deacylases YP_003279760.1 COG0583, LysR, Transcriptional regulator YP_003279761.1 COG2814, AraJ, Arabinose efflux permease YP_003279762.1 COG5267, Uncharacterized protein conserved in bacteria YP_003279763.1 COG1110, Reverse gyrase YP_003279764.1 COG2233, UraA, Xanthine/uracil permeases YP_003279765.1 COG0281, SfcA, Malic enzyme YP_003279768.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003279769.1 COG0790, FOG: TPR repeat YP_003279770.1 COG1768, Predicted phosphohydrolase YP_003279771.1 COG1813, Predicted Kfactor YP_003279772.1 COG0392, Predicted integral membrane protein YP_003279773.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003279774.1 COG4372, Uncharacterized protein conserved in bacteriawith the myosin-like domain YP_003279775.1 COG1196, Smc, Chromosome segregation ATPases YP_003279776.1 COG1484, DnaC, DNA replication protein YP_003279777.1 COG2411, Uncharacterized conserved protein YP_003279778.1 COG1643, HrpA, HrpA-like helicases YP_003279779.1 COG2259, Predicted membrane protein YP_003279780.1 COG5006, Predicted permease YP_003279781.1 COG1741, Pirin-related protein YP_003279782.1 COG0583, LysR, Transcriptional regulator YP_003279783.1 COG1538, TolC, Outer membrane protein YP_003279784.1 COG1136, SalX, ABC-type antimicrobial peptide transport system YP_003279785.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003279787.1 COG3182, PiuB, Uncharacterized iron-regulated membrane protein YP_003279789.1 COG4773, FhuE, Outer membrane receptor for ferric coprogen andferric-rhodotorulic acid YP_003279790.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279791.1 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases YP_003279792.1 COG0235, AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_003279793.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003279794.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279795.1 COG2025, FixB, Electron transfer flavoprotein YP_003279796.1 COG2086, FixA, Electron transfer flavoprotein YP_003279797.1 COG2070, Dioxygenases related to 2-nitropropanedioxygenase YP_003279798.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279799.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279800.1 COG1804, CaiB, Predicted acyl-CoA transferases/carnitinedehydratase YP_003279801.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003279802.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003279803.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003279804.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003279805.1 COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase YP_003279806.1 COG0583, LysR, Transcriptional regulator YP_003279807.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003279808.1 COG5116, RPN2, 26S proteasome regulatory complex component YP_003279809.1 COG2175, TauD, Probable taurine catabolism dioxygenase YP_003279810.1 COG3246, Uncharacterized conserved protein YP_003279811.1 COG3865, Uncharacterized protein conserved in bacteria YP_003279812.1 COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase YP_003279813.1 COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase YP_003279814.1 COG1858, MauG, Cytochrome c peroxidase YP_003279815.1 COG2010, CccA, Cytochrome c YP_003279816.1 COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor YP_003279817.1 COG1794, RacX, Aspartate racemase YP_003279818.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003279819.1 COG1864, NUC1, DNA/RNA endonuclease G YP_003279821.1 COG3180, AbrB, Putative ammonia monooxygenase YP_003279822.1 COG2188, PhnF, Transcriptional regulators YP_003279823.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003279824.1 COG0179, MhpD, 2-keto-4-pentenoatehydratase/2-oxohepta-3-ene-1 YP_003279825.1 COG3147, DedD, Uncharacterized protein conserved in bacteria YP_003279826.1 COG3133, SlyB, Outer membrane lipoprotein YP_003279827.1 COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-Soxidoreductases YP_003279828.1 COG0127, Xanthosine triphosphate pyrophosphatase YP_003279829.1 COG0631, PTC1, Serine/threonine protein phosphatase YP_003279830.1 COG0515, SPS1, Serine/threonine protein kinase YP_003279831.1 COG1561, Uncharacterized stress-induced protein YP_003279832.1 COG0194, Gmk, Guanylate kinase YP_003279833.1 COG1758, RpoZ, DNA-directed RNA polymerase YP_003279834.1 COG0317, SpoT, Guanosine polyphosphatepyrophosphohydrolases/synthetases YP_003279835.1 COG2951, MltB, Membrane-bound lytic murein transglycosylase B YP_003279836.1 COG0782, GreA, Kelongation factor YP_003279837.1 COG1167, ARO8, Transcriptional regulators containing a DNA-bindingHTH domain and an aminotransferase domain (MocR family)and their eukaryotic orthologs YP_003279838.1 COG1113, AnsP, Gamma-aminobutyrate permease and related permeases YP_003279839.1 COG3631, Ketosteroid isomerase-related protein YP_003279840.1 COG5108, RPO41, Mitochondrial DNA-directed RNA polymerase YP_003279841.1 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) YP_003279842.1 COG4521, TauA, ABC-type taurine transport system YP_003279843.1 COG4525, TauB, ABC-type taurine transport system YP_003279844.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003279845.1 COG4547, CobT, Cobalamin biosynthesis protein CobT(nicotinate-mononucleotide:5 YP_003279846.1 COG0714, MoxR-like ATPases YP_003279847.1 COG1414, IclR, Transcriptional regulator YP_003279848.1 COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes YP_003279849.1 COG0280, Pta, Phosphotransacetylase YP_003279850.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003279851.1 COG2963, Transposase and inactivated derivatives YP_003279852.1 COG1232, HemY, Protoporphyrinogen oxidase YP_003279853.1 COG0209, NrdA, Ribonucleotide reductase YP_003279854.1 COG0264, Tsf, Translation elongation factor Ts YP_003279855.1 COG1961, PinR, Site-specific recombinases YP_003279856.1 COG3305, Predicted membrane protein YP_003279857.1 COG4955, Uncharacterized protein conserved in bacteria YP_003279858.1 COG0556, UvrB, Helicase subunit of the DNA excision repair complex YP_003279859.1 COG4976, Predicted methyltransferase (contains TPR repeat) YP_003279860.1 COG0172, SerS, Seryl-tRNA synthetase YP_003279861.1 COG0761, LytB, Penicillin tolerance protein YP_003279862.1 COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_003279863.1 COG2003, RadC, DNA repair proteins YP_003279864.1 COG2840, Uncharacterized protein conserved in bacteria YP_003279865.1 COG0501, HtpX, Zn-dependent protease with chaperone function YP_003279866.1 COG1704, LemA, Uncharacterized conserved protein YP_003279867.1 COG0737, UshA, 5'-nucleotidase/2' YP_003279868.1 COG2346, Truncated hemoglobins YP_003279869.1 COG2814, AraJ, Arabinose efflux permease YP_003279870.1 COG0583, LysR, Transcriptional regulator YP_003279871.1 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis YP_003279872.1 COG0730, Predicted permeases YP_003279873.1 COG1816, Add, Adenosine deaminase YP_003279874.1 COG2211, MelB, Na+/melibiose symporter and related transporters YP_003279875.1 COG0394, Wzb, Protein-tyrosine-phosphatase YP_003279876.1 COG3196, Uncharacterized protein conserved in bacteria YP_003279877.1 COG5269, ZUO1, Ribosome-associated chaperone zuotin YP_003279878.1 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins YP_003279879.1 COG0251, TdcF, Putative translation initiation inhibitor YP_003279880.1 COG1113, AnsP, Gamma-aminobutyrate permease and related permeases YP_003279881.1 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) YP_003279882.1 COG1309, AcrR, Transcriptional regulator YP_003279883.1 COG5006, Predicted permease YP_003279884.1 COG0803, LraI, ABC-type metal ion transport system YP_003279885.1 COG3383, Uncharacterized anaerobic dehydrogenase YP_003279886.1 COG1894, NuoF, NADH:ubiquinone oxidoreductase YP_003279887.1 COG0583, LysR, Transcriptional regulator YP_003279888.1 COG0489, Mrp, ATPases involved in chromosome partitioning YP_003279889.1 COG1787, Predicted endonuclease distantly related toarchaeal Holliday junction resolvase and Mrr-likerestriction enzymes YP_003279890.1 COG1752, RssA, Predicted esterase of the alpha-beta hydrolasesuperfamily YP_003279891.1 COG2199, FOG: GGDEF domain YP_003279892.1 COG0143, MetG, Methionyl-tRNA synthetase YP_003279893.1 COG3067, NhaB, Na+/H+ antiporter YP_003279894.1 COG2863, Cytochrome c553 YP_003279895.1 COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases YP_003279896.1 COG2391, Predicted transporter component YP_003279897.1 COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases YP_003279898.1 COG5501, Predicted secreted protein YP_003279899.1 COG1039, RnhC, Ribonuclease HIII YP_003279900.1 COG1284, Uncharacterized conserved protein YP_003279901.1 COG2913, SmpA, Small protein A (tmRNA-binding) YP_003279902.1 COG0165, ArgH, Argininosuccinate lyase YP_003279903.1 COG3386, Gluconolactonase YP_003279904.1 COG1354, Uncharacterized conserved protein YP_003279905.1 COG0602, NrdG, Organic radical activating enzymes YP_003279906.1 COG0720, 6-pyruvoyl-tetrahydropterin synthase YP_003279907.1 COG3203, OmpC, Outer membrane protein (porin) YP_003279908.1 COG0853, PanD, Aspartate 1-decarboxylase YP_003279909.1 COG3232, HpaF, 5-carboxymethyl-2-hydroxymuconate isomerase YP_003279910.1 COG3148, Uncharacterized conserved protein YP_003279911.1 COG4682, Predicted membrane protein YP_003279912.1 COG5282, Uncharacterized conserved protein YP_003279913.1 COG0115, IlvE, Branched-chain amino acidaminotransferase/4-amino-4-deoxychorismate lyase YP_003279914.1 COG0147, TrpE, Anthranilate/para-aminobenzoate synthases componentI YP_003279915.1 COG1434, Uncharacterized conserved protein YP_003279916.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003279917.1 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily YP_003279918.1 COG0413, PanB, Ketopantoate hydroxymethyltransferase YP_003279919.1 COG0414, PanC, Panthothenate synthetase YP_003279920.1 COG3204, Uncharacterized protein conserved in bacteria YP_003279922.1 COG0659, SUL1, Sulfate permease and related transporters (MFSsuperfamily) YP_003279923.1 COG2922, Smg, Uncharacterized protein conserved in bacteria YP_003279924.1 COG0583, LysR, Transcriptional regulator YP_003279925.1 COG0019, LysA, Diaminopimelate decarboxylase YP_003279926.1 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily YP_003279927.1 COG0240, GpsA, Glycerol-3-phosphate dehydrogenase YP_003279928.1 COG1952, SecB, Preprotein translocase subunit SecB YP_003279929.1 COG0695, GrxC, Glutaredoxin and related proteins YP_003279930.1 COG0607, PspE, Rhodanese-related sulfurtransferase YP_003279931.1 COG0588, GpmA, Phosphoglycerate mutase 1 YP_003279932.1 COG0793, Prc, Periplasmic protease YP_003279933.1 COG0476, ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_003279934.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003279935.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003279936.1 COG4585, Signal transduction histidine kinase YP_003279937.1 COG5487, Small integral membrane protein YP_003279938.1 COG3599, DivIVA, Cell division initiation protein YP_003279939.1 COG2823, OsmY, Predicted periplasmic or secreted lipoprotein YP_003279940.1 COG4307, Uncharacterized protein conserved in bacteria YP_003279941.1 COG0669, CoaD, Phosphopantetheine adenylyltransferase YP_003279942.1 COG0742, N6-adenine-specific methylase YP_003279943.1 COG0612, PqqL, Predicted Zn-dependent peptidases YP_003279944.1 COG0612, PqqL, Predicted Zn-dependent peptidases YP_003279945.1 COG0552, FtsY, Signal recognition particle GTPase YP_003279946.1 COG1324, CutA, Uncharacterized protein involved in tolerance todivalent cations YP_003279947.1 COG1893, ApbA, Ketopantoate reductase YP_003279948.1 COG5516, Conserved protein containing a Zn-ribbon-like motif YP_003279949.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003279950.1 COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminatelyase YP_003279951.1 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_003279952.1 COG1995, PdxA, Pyridoxal phosphate biosynthesis protein YP_003279953.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279954.1 COG0583, LysR, Transcriptional regulator YP_003279955.1 COG0583, LysR, Transcriptional regulator YP_003279956.1 COG2814, AraJ, Arabinose efflux permease YP_003279957.1 COG3520, Uncharacterized protein conserved in bacteria YP_003279958.1 COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase YP_003279959.1 COG3246, Uncharacterized conserved protein YP_003279960.1 COG1802, GntR, Transcriptional regulators YP_003279961.1 COG0129, IlvD, Dihydroxyacid dehydratase/phosphogluconatedehydratase YP_003279962.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279963.1 COG0583, LysR, Transcriptional regulator YP_003279964.1 COG0568, RpoD, DNA-directed RNA polymerase YP_003279965.1 COG3181, Uncharacterized protein conserved in bacteria YP_003279967.1 COG3239, DesA, Fatty acid desaturase YP_003279969.1 COG5077, Ubiquitin carboxyl-terminal hydrolase YP_003279970.1 COG4499, Predicted membrane protein YP_003279971.1 COG4741, Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase YP_003279972.1 COG4579, Isocitrate dehydrogenase kinase/phosphatase YP_003279973.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003279974.1 COG1999, Uncharacterized protein SCO1/SenC/PrrC YP_003279975.1 COG0109, CyoE, Polyprenyltransferase (cytochrome oxidase assemblyfactor) YP_003279976.1 COG0386, BtuE, Glutathione peroxidase YP_003279977.1 COG3346, Uncharacterized conserved protein YP_003279979.1 COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase YP_003279981.1 COG3175, COX11, Cytochrome oxidase assembly factor YP_003279982.1 COG0843, CyoB, Heme/copper-type cytochrome/quinol oxidases YP_003279983.1 COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases YP_003279984.1 COG2226, UbiE, Methylase involved in ubiquinone/menaquinonebiosynthesis YP_003279985.1 COG1040, ComFC, Predicted amidophosphoribosyltransferases YP_003279986.1 COG0219, CspR, Predicted rRNA methylase (SpoU class) YP_003279987.1 COG3577, Predicted aspartyl protease YP_003279989.1 COG1280, RhtB, Putative threonine efflux protein YP_003279990.1 COG0475, KefB, Kef-type K+ transport systems YP_003279991.1 COG4566, TtrR, Response regulator YP_003279992.1 COG2863, Cytochrome c553 YP_003279993.1 COG0714, MoxR-like ATPases YP_003279995.1 COG1670, RimL, Acetyltransferases YP_003279996.1 COG3825, Uncharacterized protein conserved in bacteria YP_003279997.1 COG0729, Outer membrane protein YP_003279998.1 COG2911, Uncharacterized protein conserved in bacteria YP_003279999.1 COG3383, Uncharacterized anaerobic dehydrogenase YP_003280000.1 COG1937, Uncharacterized protein conserved in bacteria YP_003280001.1 COG1230, CzcD, Co/Zn/Cd efflux system component YP_003280002.1 COG4430, Uncharacterized protein conserved in bacteria YP_003280003.1 COG2059, ChrA, Chromate transport protein ChrA YP_003280004.1 COG0823, TolB, Periplasmic component of the Tol biopolymertransport system YP_003280005.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280006.1 COG0583, LysR, Transcriptional regulator YP_003280007.1 COG3895, Predicted periplasmic protein YP_003280008.1 COG2199, FOG: GGDEF domain YP_003280009.1 COG2199, FOG: GGDEF domain YP_003280010.1 COG0642, BaeS, Signal transduction histidine kinase YP_003280011.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003280012.1 COG0187, GyrB, Type IIA topoisomerase (DNA gyrase/topo II YP_003280013.1 COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transportsystems YP_003280014.1 COG0265, DegQ, Trypsin-like serine proteases YP_003280015.1 COG1393, ArsC, Arsenate reductase and related proteins YP_003280016.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280017.1 COG2233, UraA, Xanthine/uracil permeases YP_003280018.1 COG0402, SsnA, Cytosine deaminase and related metal-dependenthydrolases YP_003280019.1 COG0583, LysR, Transcriptional regulator YP_003280020.1 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003280021.1 COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases YP_003280022.1 COG0540, PyrB, Aspartate carbamoyltransferase YP_003280023.1 COG2065, PyrR, Pyrimidine operon attenuation protein/uracilphosphoribosyltransferase YP_003280024.1 COG0816, Predicted endonuclease involved in recombination(possible Holliday junction resolvase in Mycoplasmas andB. subtilis) YP_003280025.1 COG1678, Putative transcriptional regulator YP_003280026.1 COG0415, PhrB, Deoxyribodipyrimidine photolyase YP_003280027.1 COG0643, CheA, Chemotaxis protein histidine kinase and related kinases YP_003280028.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003280029.1 COG0835, CheW, Chemotaxis signal transduction protein YP_003280030.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003280031.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003280032.1 COG1773, Rubredoxin YP_003280033.1 COG0351, ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidinekinase YP_003280034.1 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase YP_003280035.1 COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D YP_003280036.1 COG2818, Tag, 3-methyladenine DNA glycosylase YP_003280037.1 COG0531, PotE, Amino acid transporters YP_003280039.1 COG4654, Cytochrome c551/c552 YP_003280040.1 COG0138, PurH, AICAR transformylase/IMP cyclohydrolase PurH (onlyIMP cyclohydrolase domain in Aful) YP_003280041.1 COG2901, Fis, Factor for inversion stimulation Fis YP_003280042.1 COG0042, tRNA-dihydrouridine synthase YP_003280043.1 COG2173, DdpX, D-alanyl-D-alanine dipeptidase YP_003280044.1 COG1238, Predicted membrane protein YP_003280045.1 COG3659, OprB, Carbohydrate-selective porin YP_003280046.1 COG4566, TtrR, Response regulator YP_003280047.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003280048.1 COG1538, TolC, Outer membrane protein YP_003280049.1 COG3696, Putative silver efflux pump YP_003280050.1 COG0845, AcrA, Membrane-fusion protein YP_003280051.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280052.1 COG0157, NadC, Nicotinate-nucleotide pyrophosphorylase YP_003280053.1 COG4111, Uncharacterized conserved protein YP_003280054.1 COG2199, FOG: GGDEF domain YP_003280055.1 COG4386, Mu-like prophage tail sheath protein gpL YP_003280056.1 COG1633, Uncharacterized conserved protein YP_003280057.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003280058.1 COG5343, Uncharacterized protein conserved in bacteria YP_003280059.1 COG3667, PcoB, Uncharacterized protein involved in copper resistance YP_003280060.1 COG2041, Sulfite oxidase and related enzymes YP_003280061.1 COG4117, Thiosulfate reductase cytochrome B subunit(membrane anchoring protein) YP_003280062.1 COG4315, Uncharacterized protein conserved in bacteria YP_003280063.1 COG0753, KatE, Catalase YP_003280064.1 COG1896, Predicted hydrolases of HD superfamily YP_003280065.1 COG0778, NfnB, Nitroreductase YP_003280066.1 COG4992, ArgD, Ornithine/acetylornithine aminotransferase YP_003280067.1 COG2005, ModE, N-terminal domain of molybdenum-binding protein YP_003280068.1 COG3837, Uncharacterized conserved protein YP_003280070.1 COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases YP_003280072.1 COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNAglycosylase YP_003280073.1 COG0861, TerC, Membrane protein TerC YP_003280074.1 COG0589, UspA, Universal stress protein UspA and related nucleotide-binding proteins YP_003280075.1 COG0583, LysR, Transcriptional regulator YP_003280076.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003280077.1 COG5507, Uncharacterized conserved protein YP_003280078.1 COG0012, Predicted GTPase YP_003280079.1 COG2801, Tra5, Transposase and inactivated derivatives YP_003280080.1 COG2895, CysN, GTPases - Sulfate adenylate transferase subunit 1 YP_003280082.1 COG3378, Predicted ATPase YP_003280083.1 COG0564, RluA, Pseudouridylate synthases YP_003280085.1 COG0323, MutL, DNA mismatch repair enzyme (predicted ATPase) YP_003280086.1 COG1715, Mrr, Restriction endonuclease YP_003280087.1 COG1118, CysA, ABC-type sulfate/molybdate transport systems YP_003280088.1 COG1483, Predicted ATPase (AAA+ superfamily) YP_003280089.1 COG1743, Adenine-specific DNA methylase containing aZn-ribbon YP_003280090.1 COG2200, Rtn, FOG: EAL domain YP_003280091.1 COG0553, HepA, Superfamily II DNA/RNA helicases YP_003280092.1 COG2378, Predicted transcriptional regulator YP_003280093.1 COG3839, MalK, ABC-type sugar transport systems YP_003280094.1 COG3217, Uncharacterized Fe-S protein YP_003280095.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003280096.1 COG1651, DsbG, Protein-disulfide isomerase YP_003280097.1 COG3975, Predicted protease with the C-terminal PDZ domain YP_003280098.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003280100.1 COG2814, AraJ, Arabinose efflux permease YP_003280101.1 COG0583, LysR, Transcriptional regulator YP_003280102.1 COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes YP_003280103.1 COG1893, ApbA, Ketopantoate reductase YP_003280104.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280105.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280106.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280107.1 COG2005, ModE, N-terminal domain of molybdenum-binding protein YP_003280108.1 COG0725, ModA, ABC-type molybdate transport system YP_003280109.1 COG4149, ModC, ABC-type molybdate transport system YP_003280110.1 COG4148, ModC, ABC-type molybdate transport system YP_003280111.1 COG1526, FdhD, Uncharacterized protein required for formatedehydrogenase activity YP_003280112.1 COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase YP_003280113.1 COG0621, MiaB, 2-methylthioadenine synthetase YP_003280115.1 COG4656, RnfC, Predicted NADH:ubiquinone oxidoreductase YP_003280116.1 COG3782, Uncharacterized protein conserved in bacteria YP_003280117.1 COG0791, Spr, Cell wall-associated hydrolases (invasion-associatedproteins) YP_003280118.1 COG0541, Ffh, Signal recognition particle GTPase YP_003280119.1 COG4137, ABC-type uncharacterized transport system YP_003280120.1 COG2370, HupE, Hydrogenase/urease accessory protein YP_003280121.1 COG0642, BaeS, Signal transduction histidine kinase YP_003280122.1 COG2204, AtoC, Response regulator containing CheY-like receiver YP_003280123.1 COG3023, AmpD, Negative regulator of beta-lactamase expression YP_003280124.1 COG0209, NrdA, Ribonucleotide reductase YP_003280125.1 COG0208, NrdF, Ribonucleotide reductase YP_003280127.1 COG0524, RbsK, Sugar kinases YP_003280128.1 COG3827, Uncharacterized protein conserved in bacteria YP_003280129.1 COG2264, PrmA, Ribosomal protein L11 methylase YP_003280131.1 COG0511, AccB, Biotin carboxyl carrier protein YP_003280132.1 COG0526, TrxA, Thiol-disulfide isomerase and thioredoxins YP_003280133.1 COG1391, GlnE, Glutamine synthetase adenylyltransferase YP_003280134.1 COG0773, MurC, UDP-N-acetylmuramate-alanine ligase YP_003280135.1 COG3437, Response regulator containing a CheY-likereceiver domain and an HD-GYP domain YP_003280136.1 COG3098, Uncharacterized protein conserved in bacteria YP_003280137.1 COG0722, AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)synthase YP_003280139.1 COG0312, TldD, Predicted Zn-dependent proteases and theirinactivated homologs YP_003280140.1 COG0772, FtsW, Bacterial cell division membrane protein YP_003280141.1 COG3150, Predicted esterase YP_003280143.1 COG0810, TonB, Periplasmic protein TonB YP_003280144.1 COG0169, AroE, Shikimate 5-dehydrogenase YP_003280145.1 COG0744, MrcB, Membrane carboxypeptidase (penicillin-bindingprotein) YP_003280146.1 COG0817, RuvC, Holliday junction resolvasome YP_003280147.1 COG5455, Predicted integral membrane protein YP_003280148.1 COG1373, Predicted ATPase (AAA+ superfamily) YP_003280150.1 COG0774, LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_003280151.1 COG0206, FtsZ, Cell division GTPase YP_003280152.1 COG0849, FtsA, Actin-like ATPase involved in cell division YP_003280153.1 COG1589, FtsQ, Cell division septal protein YP_003280154.1 COG1181, DdlA, D-alanine-D-alanine ligase and related ATP-graspenzymes YP_003280155.1 COG0773, MurC, UDP-N-acetylmuramate-alanine ligase YP_003280156.1 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosaminetransferase YP_003280157.1 COG0772, FtsW, Bacterial cell division membrane protein YP_003280158.1 COG0771, MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_003280159.1 COG0472, Rfe, UDP-N-acetylmuramyl pentapeptidephosphotransferase/UDP-N- acetylglucosamine-1-phosphatetransferase YP_003280160.1 COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase YP_003280161.1 COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase YP_003280162.1 COG0768, FtsI, Cell division protein FtsI/penicillin-bindingprotein 2 YP_003280163.1 COG3116, FtsL, Cell division protein YP_003280164.1 COG0275, Predicted S-adenosylmethionine-dependentmethyltransferase involved in cell envelope biogenesis YP_003280165.1 COG2001, Uncharacterized protein conserved in bacteria YP_003280166.1 COG1220, HslU, ATP-dependent protease HslVU (ClpYQ) YP_003280167.1 COG5405, HslV, ATP-dependent protease HslVU (ClpYQ) YP_003280168.1 COG3113, Predicted NTP binding protein (contains STASdomain) YP_003280169.1 COG1734, DksA, DnaK suppressor protein YP_003280170.1 COG0523, Putative GTPases (G3E family) YP_003280171.1 COG4973, XerC, Site-specific recombinase XerC YP_003280172.1 COG3159, Uncharacterized protein conserved in bacteria YP_003280173.1 COG3159, Uncharacterized protein conserved in bacteria YP_003280174.1 COG0253, DapF, Diaminopimelate epimerase YP_003280175.1 COG1846, MarR, Transcriptional regulators YP_003280176.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003280178.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280179.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003280180.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003280181.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003280182.1 COG0491, GloB, Zn-dependent hydrolases YP_003280183.1 COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase andrelated pseudouridylate synthases YP_003280184.1 COG2375, ViuB, Siderophore-interacting protein YP_003280185.1 COG2814, AraJ, Arabinose efflux permease YP_003280186.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003280187.1 COG1629, CirA, Outer membrane receptor proteins YP_003280188.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003280189.1 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily YP_003280191.1 COG2271, UhpC, Sugar phosphate permease YP_003280192.1 COG3970, Fumarylacetoacetate (FAA) hydrolase familyprotein YP_003280193.1 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunitand related amidases YP_003280194.1 COG0583, LysR, Transcriptional regulator YP_003280195.1 COG0031, CysK, Cysteine synthase YP_003280196.1 COG1132, MdlB, ABC-type multidrug transport system YP_003280197.1 COG0845, AcrA, Membrane-fusion protein YP_003280198.1 COG3696, Putative silver efflux pump YP_003280199.1 COG1538, TolC, Outer membrane protein YP_003280200.1 COG2771, CsgD, DNA-binding HTH domain-containing proteins YP_003280201.1 COG0583, LysR, Transcriptional regulator YP_003280202.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003280203.1 COG5460, Uncharacterized conserved protein YP_003280204.1 COG0420, SbcD, DNA repair exonuclease YP_003280205.1 COG0419, SbcC, ATPase involved in DNA repair YP_003280206.1 COG3485, PcaH, Protocatechuate 3 YP_003280207.1 COG4663, FcbT1, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003280208.1 COG4665, FcbT2, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003280209.1 COG4664, FcbT3, TRAP-type mannitol/chloroaromatic compoundtransport system YP_003280210.1 COG2509, Uncharacterized FAD-dependent dehydrogenases YP_003280211.1 COG3257, GlxB, Uncharacterized protein YP_003280212.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003280213.1 COG0426, FpaA, Uncharacterized flavoproteins YP_003280214.1 COG0501, HtpX, Zn-dependent protease with chaperone function YP_003280215.1 COG0277, GlcD, FAD/FMN-containing dehydrogenases YP_003280216.1 COG1432, Uncharacterized conserved protein YP_003280217.1 COG0418, PyrC, Dihydroorotase YP_003280218.1 COG2225, AceB, Malate synthase YP_003280219.1 COG2423, Predicted ornithine cyclodeaminase YP_003280220.1 COG0010, SpeB, Arginase/agmatinase/formimionoglutamate hydrolase YP_003280221.1 COG1126, GlnQ, ABC-type polar amino acid transport system YP_003280222.1 COG0765, HisM, ABC-type amino acid transport system YP_003280223.1 COG0765, HisM, ABC-type amino acid transport system YP_003280224.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003280225.1 COG0583, LysR, Transcriptional regulator YP_003280226.1 COG3090, DctM, TRAP-type C4-dicarboxylate transport system YP_003280227.1 COG1593, DctQ, TRAP-type C4-dicarboxylate transport system YP_003280228.1 COG1638, DctP, TRAP-type C4-dicarboxylate transport system YP_003280229.1 COG1052, LdhA, Lactate dehydrogenase and related dehydrogenases YP_003280230.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003280231.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003280232.1 COG2814, AraJ, Arabinose efflux permease YP_003280233.1 COG1846, MarR, Transcriptional regulators YP_003280234.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003280235.1 COG1802, GntR, Transcriptional regulators YP_003280236.1 COG5265, ATM1, ABC-type transport system involved in Fe-S clusterassembly YP_003280237.1 COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) YP_003280238.1 COG1607, Acyl-CoA hydrolase YP_003280239.1 COG1664, CcmA, Integral membrane protein CcmA involved in cellshape determination YP_003280240.1 COG2050, PaaI, Uncharacterized protein YP_003280242.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003280243.1 COG1946, TesB, Acyl-CoA thioesterase YP_003280244.1 COG4757, Predicted alpha/beta hydrolase YP_003280245.1 COG0183, PaaJ, Acetyl-CoA acetyltransferase YP_003280246.1 COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase YP_003280247.1 COG4731, Uncharacterized protein conserved in bacteria YP_003280248.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003280249.1 COG1309, AcrR, Transcriptional regulator YP_003280250.1 COG1309, AcrR, Transcriptional regulator YP_003280251.1 COG0642, BaeS, Signal transduction histidine kinase YP_003280252.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003280253.1 COG0548, ArgB, Acetylglutamate kinase YP_003280254.1 COG0472, Rfe, UDP-N-acetylmuramyl pentapeptidephosphotransferase/UDP-N- acetylglucosamine-1-phosphatetransferase YP_003280255.1 COG1216, Predicted glycosyltransferases YP_003280256.1 COG5617, Predicted integral membrane protein YP_003280257.1 COG0438, RfaG, Glycosyltransferase YP_003280258.1 COG2244, RfbX, Membrane protein involved in the export of O-antigenand teichoic acid YP_003280259.1 COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase YP_003280260.1 COG0751, GlyS, Glycyl-tRNA synthetase YP_003280261.1 COG0752, GlyQ, Glycyl-tRNA synthetase YP_003280262.1 COG4260, Putative virion core protein (lumpy skin diseasevirus) YP_003280263.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003280264.1 COG1571, Predicted DNA-binding protein containing aZn-ribbon domain YP_003280265.1 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) YP_003280266.1 COG1178, ThiP, ABC-type Fe3+ transport system YP_003280267.1 COG3842, PotA, ABC-type spermidine/putrescine transport systems YP_003280268.1 COG1840, AfuA, ABC-type Fe3+ transport system YP_003280269.1 COG0583, LysR, Transcriptional regulator YP_003280270.1 COG1898, RfbC, dTDP-4-dehydrorhamnose 3 YP_003280271.1 COG1209, RfbA, dTDP-glucose pyrophosphorylase YP_003280272.1 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase YP_003280273.1 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase YP_003280274.1 COG1088, RfbB, dTDP-D-glucose 4 YP_003280275.1 COG1521, Putative transcriptional regulator YP_003280276.1 COG1652, XkdP, Uncharacterized protein containing LysM domain YP_003280277.1 COG1087, GalE, UDP-glucose 4-epimerase YP_003280278.1 COG0607, PspE, Rhodanese-related sulfurtransferase YP_003280279.1 COG1451, Predicted metal-dependent hydrolase YP_003280280.1 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003280281.1 COG0241, HisB, Histidinol phosphatase and related phosphatases YP_003280282.1 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase YP_003280283.1 COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrierprotein) dehydratases YP_003280284.1 COG0815, Lnt, Apolipoprotein N-acyltransferase YP_003280285.1 COG4535, CorC, Putative Mg2+ and Co2+ transporter CorC YP_003280286.1 COG3981, Predicted acetyltransferase YP_003280287.1 COG1522, Lrp, Transcriptional regulators YP_003280288.1 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins YP_003280289.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280290.1 COG3186, Phenylalanine-4-hydroxylase YP_003280291.1 COG3264, Small-conductance mechanosensitive channel YP_003280292.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003280293.1 COG2703, Hemerythrin YP_003280294.1 COG0491, GloB, Zn-dependent hydrolases YP_003280295.1 COG0795, Predicted permeases YP_003280296.1 COG2375, ViuB, Siderophore-interacting protein YP_003280297.1 COG1846, MarR, Transcriptional regulators YP_003280298.1 COG4774, Fiu, Outer membrane receptor for monomeric catechols YP_003280299.1 COG3128, PiuC, Uncharacterized iron-regulated protein YP_003280300.1 COG1450, PulD, Type II secretory pathway YP_003280301.1 COG4771, FepA, Outer membrane receptor for ferrienterochelin andcolicins YP_003280302.1 COG0741, MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_003280303.1 COG0212, 5-formyltetrahydrofolate cyclo-ligase YP_003280304.1 COG0753, KatE, Catalase YP_003280305.1 COG0603, Predicted PP-loop superfamily ATPase YP_003280306.1 COG0625, Gst, Glutathione S-transferase YP_003280307.1 COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase YP_003280308.1 COG1064, AdhP, Zn-dependent alcohol dehydrogenases YP_003280309.1 COG3118, Thioredoxin domain-containing protein YP_003280310.1 COG0841, AcrB, Cation/multidrug efflux pump YP_003280311.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280312.1 COG1565, Uncharacterized conserved protein YP_003280313.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003280314.1 COG1539, FolB, Dihydroneopterin aldolase YP_003280315.1 COG0037, MesJ, Predicted ATPase of the PP-loop superfamilyimplicated in cell cycle control YP_003280317.1 COG4666, TRAP-type uncharacterized transport system YP_003280318.1 COG0406, GpmB, Fructose-2 YP_003280319.1 COG3616, Predicted amino acid aldolase or racemase YP_003280320.1 COG0503, Apt, Adenine/guanine phosphoribosyltransferases andrelated PRPP-binding proteins YP_003280321.1 COG1473, AbgB, Metal-dependentamidase/aminoacylase/carboxypeptidase YP_003280322.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280324.1 COG0514, RecQ, Superfamily II DNA helicase YP_003280325.1 COG4232, Thiol:disulfide interchange protein YP_003280326.1 COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) YP_003280327.1 COG0474, MgtA, Cation transport ATPase YP_003280328.1 COG1285, SapB, Uncharacterized membrane protein YP_003280329.1 COG2255, RuvB, Holliday junction resolvasome YP_003280330.1 COG1225, Bcp, Peroxiredoxin YP_003280331.1 COG5640, Secreted trypsin-like serine protease YP_003280332.1 COG0632, RuvA, Holliday junction resolvasome YP_003280333.1 COG1702, PhoH, Phosphate starvation-inducible protein PhoH YP_003280334.1 COG0319, Predicted metal-dependent hydrolase YP_003280335.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003280336.1 COG4566, TtrR, Response regulator YP_003280337.1 COG3193, GlcG, Uncharacterized protein YP_003280338.1 COG3637, Opacity protein and related surface antigens YP_003280339.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280340.1 COG0730, Predicted permeases YP_003280341.1 COG0513, SrmB, Superfamily II DNA and RNA helicases YP_003280342.1 COG1473, AbgB, Metal-dependentamidase/aminoacylase/carboxypeptidase YP_003280343.1 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelatedesuccinylase and related deacylases YP_003280344.1 COG1490, Dtd, D-Tyr-tRNAtyr deacylase YP_003280345.1 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters YP_003280346.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003280347.1 COG0775, Pfs, Nucleoside phosphorylase YP_003280348.1 COG2199, FOG: GGDEF domain YP_003280349.1 COG2303, BetA, Choline dehydrogenase and related flavoproteins YP_003280350.1 COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase YP_003280351.1 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase YP_003280352.1 COG1680, AmpC, Beta-lactamase class C and other penicillin bindingproteins YP_003280353.1 COG1846, MarR, Transcriptional regulators YP_003280354.1 COG1764, OsmC, Predicted redox protein YP_003280355.1 COG1514, LigT, 2'-5' RNA ligase YP_003280356.1 COG2334, Putative homoserine kinase type II (proteinkinase fold) YP_003280357.1 COG1285, SapB, Uncharacterized membrane protein YP_003280358.1 COG1309, AcrR, Transcriptional regulator YP_003280359.1 COG2814, AraJ, Arabinose efflux permease YP_003280360.1 COG0789, SoxR, Predicted transcriptional regulators YP_003280361.1 COG0251, TdcF, Putative translation initiation inhibitor YP_003280362.1 COG2814, AraJ, Arabinose efflux permease YP_003280363.1 COG0326, HtpG, Molecular chaperone YP_003280364.1 COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase andrelated pseudouridylate synthases YP_003280365.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003280366.1 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) YP_003280367.1 COG0411, LivG, ABC-type branched-chain amino acid transportsystems YP_003280368.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003280369.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003280370.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003280371.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003280372.1 COG1541, PaaK, Coenzyme F390 synthetase YP_003280373.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280374.1 COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex YP_003280375.1 COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases YP_003280376.1 COG4598, HisP, ABC-type histidine transport system YP_003280377.1 COG4324, Predicted aminopeptidase YP_003280378.1 COG2194, Predicted membrane-associated YP_003280379.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003280380.1 COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003280381.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003280382.1 COG0590, CumB, Cytosine/adenosine deaminases YP_003280383.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003280384.1 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases YP_003280385.1 COG4281, ACB, Acyl-CoA-binding protein YP_003280386.1 COG3203, OmpC, Outer membrane protein (porin) YP_003280387.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003280388.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280389.1 COG3246, Uncharacterized conserved protein YP_003280390.1 COG2175, TauD, Probable taurine catabolism dioxygenase YP_003280391.1 COG2207, AraC, AraC-type DNA-binding domain-containing proteins YP_003280392.1 COG1473, AbgB, Metal-dependentamidase/aminoacylase/carboxypeptidase YP_003280393.1 COG3622, Hfi, Hydroxypyruvate isomerase YP_003280394.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003280395.1 COG0243, BisC, Anaerobic dehydrogenases YP_003280396.1 COG3706, PleD, Response regulator containing a CheY-like receiverdomain and a GGDEF domain YP_003280397.1 COG1231, Monoamine oxidase YP_003280398.1 COG2010, CccA, Cytochrome c YP_003280399.1 COG0251, TdcF, Putative translation initiation inhibitor YP_003280400.1 COG2814, AraJ, Arabinose efflux permease YP_003280401.1 COG2844, GlnD, UTP:GlnB (protein PII) uridylyltransferase YP_003280402.1 COG1574, Predicted metal-dependent hydrolase with theTIM-barrel fold YP_003280403.1 COG1335, PncA, Amidases related to nicotinamidase YP_003280404.1 COG1741, Pirin-related protein YP_003280405.1 COG0583, LysR, Transcriptional regulator YP_003280406.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280407.1 COG3735, Uncharacterized protein conserved in bacteria YP_003280408.1 COG0179, MhpD, 2-keto-4-pentenoatehydratase/2-oxohepta-3-ene-1 YP_003280409.1 COG1414, IclR, Transcriptional regulator YP_003280410.1 COG0810, TonB, Periplasmic protein TonB YP_003280411.1 COG1288, Predicted membrane protein YP_003280412.1 COG3180, AbrB, Putative ammonia monooxygenase YP_003280413.1 COG3016, PhuW, Uncharacterized iron-regulated protein YP_003280414.1 COG5001, Predicted signal transduction protein containinga membrane domain YP_003280415.1 COG0788, PurU, Formyltetrahydrofolate hydrolase YP_003280416.1 COG0583, LysR, Transcriptional regulator YP_003280417.1 COG0210, UvrD, Superfamily I DNA and RNA helicases YP_003280418.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003280419.1 COG0277, GlcD, FAD/FMN-containing dehydrogenases YP_003280420.1 COG2133, Glucose/sorbosone dehydrogenases YP_003280421.1 COG3048, DsdA, D-serine dehydratase YP_003280422.1 COG3511, PlcC, Phospholipase C YP_003280423.1 COG5386, Cell surface protein YP_003280424.1 COG3696, Putative silver efflux pump YP_003280425.1 COG0845, AcrA, Membrane-fusion protein YP_003280426.1 COG1538, TolC, Outer membrane protein YP_003280427.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003280428.1 COG1619, LdcA, Uncharacterized proteins YP_003280429.1 COG0642, BaeS, Signal transduction histidine kinase YP_003280430.1 COG3696, Putative silver efflux pump YP_003280432.1 COG4607, CeuA, ABC-type enterochelin transport system YP_003280433.1 COG4771, FepA, Outer membrane receptor for ferrienterochelin andcolicins YP_003280434.1 COG2733, Predicted membrane protein YP_003280435.1 COG1566, EmrA, Multidrug resistance efflux pump YP_003280436.1 COG1538, TolC, Outer membrane protein YP_003280437.1 COG1215, Glycosyltransferases YP_003280438.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003280439.1 COG3507, XynB, Beta-xylosidase YP_003280440.1 COG4845, Chloramphenicol O-acetyltransferase YP_003280441.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003280442.1 COG3604, FhlA, Transcriptional regulator containing GAF YP_003280443.1 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_003280444.1 COG0075, Serine-pyruvate aminotransferase/archaealaspartate aminotransferase YP_003280445.1 COG1038, PycA, Pyruvate carboxylase YP_003280446.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003280447.1 COG1309, AcrR, Transcriptional regulator YP_003280448.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003280449.1 COG0325, Predicted enzyme with a TIM-barrel fold YP_003280450.1 COG2805, PilT, Tfp pilus assembly protein YP_003280451.1 COG5008, PilU, Tfp pilus assembly protein YP_003280452.1 COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_003280453.1 COG2823, OsmY, Predicted periplasmic or secreted lipoprotein YP_003280454.1 COG0279, GmhA, Phosphoheptose isomerase YP_003280455.1 COG0792, Predicted endonuclease distantly related toarchaeal Holliday junction resolvase YP_003280456.1 COG0313, Predicted methyltransferases YP_003280457.1 COG0443, DnaK, Molecular chaperone YP_003280458.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003280459.1 COG1765, Predicted redox protein YP_003280460.1 COG0747, DdpA, ABC-type dipeptide transport system YP_003280461.1 COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transportsystems YP_003280462.1 COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transportsystems YP_003280463.1 COG1123, ATPase components of various ABC-type transportsystems YP_003280464.1 COG2141, Coenzyme F420-dependent N5 YP_003280465.1 COG4950, Uncharacterized protein conserved in bacteria YP_003280466.1 COG2128, Uncharacterized conserved protein YP_003280467.1 COG0471, CitT, Di- and tricarboxylate transporters YP_003280468.1 COG0092, RpsC, Ribosomal protein S3 YP_003280469.1 COG0203, RplQ, Ribosomal protein L17 YP_003280470.1 COG0202, RpoA, DNA-directed RNA polymerase YP_003280471.1 COG0522, RpsD, Ribosomal protein S4 and related proteins YP_003280472.1 COG0100, RpsK, Ribosomal protein S11 YP_003280473.1 COG0099, RpsM, Ribosomal protein S13 YP_003280474.1 COG0257, RpmJ, Ribosomal protein L36 YP_003280475.1 COG0201, SecY, Preprotein translocase subunit SecY YP_003280476.1 COG0200, RplO, Ribosomal protein L15 YP_003280477.1 COG1841, RpmD, Ribosomal protein L30/L7E YP_003280478.1 COG0098, RpsE, Ribosomal protein S5 YP_003280479.1 COG0256, RplR, Ribosomal protein L18 YP_003280480.1 COG0097, RplF, Ribosomal protein L6P/L9E YP_003280481.1 COG0096, RpsH, Ribosomal protein S8 YP_003280482.1 COG0199, RpsN, Ribosomal protein S14 YP_003280483.1 COG0094, RplE, Ribosomal protein L5 YP_003280484.1 COG0198, RplX, Ribosomal protein L24 YP_003280485.1 COG0093, RplN, Ribosomal protein L14 YP_003280486.1 COG0578, GlpA, Glycerol-3-phosphate dehydrogenase YP_003280487.1 COG1349, GlpR, Transcriptional regulators of sugar metabolism YP_003280488.1 COG0456, RimI, Acetyltransferases YP_003280489.1 COG0554, GlpK, Glycerol kinase YP_003280490.1 COG0580, GlpF, Glycerol uptake facilitator and related permeases(Major Intrinsic Protein Family) YP_003280491.1 COG2173, DdpX, D-alanyl-D-alanine dipeptidase YP_003280492.1 COG4222, Uncharacterized protein conserved in bacteria YP_003280493.1 COG0345, ProC, Pyrroline-5-carboxylate reductase YP_003280494.1 COG0382, UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_003280495.1 COG0671, PgpB, Membrane-associated phospholipid phosphatase YP_003280496.1 COG0783, Dps, DNA-binding ferritin-like protein (oxidative damageprotectant) YP_003280497.1 COG0583, LysR, Transcriptional regulator YP_003280498.1 COG1200, RecG, RecG-like helicase YP_003280499.1 COG2206, HD-GYP domain YP_003280500.1 COG0809, QueA, S-adenosylmethionine:tRNA-ribosyltransferase- isomerase(queuine synthetase) YP_003280501.1 COG3944, Capsular polysaccharide biosynthesis protein YP_003280502.1 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily YP_003280503.1 COG0692, Ung, Uracil DNA glycosylase YP_003280504.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003280505.1 COG0134, TrpC, Indole-3-glycerol phosphate synthase YP_003280506.1 COG0370, FeoB, Fe2+ transport system protein B YP_003280507.1 COG0547, TrpD, Anthranilate phosphoribosyltransferase YP_003280508.1 COG0512, PabA, Anthranilate/para-aminobenzoate synthases componentII YP_003280509.1 COG1605, PheA, Chorismate mutase YP_003280510.1 COG0147, TrpE, Anthranilate/para-aminobenzoate synthases componentI YP_003280511.1 COG3055, Uncharacterized protein conserved in bacteria YP_003280512.1 COG0421, SpeE, Spermidine synthase YP_003280513.1 COG0546, Gph, Predicted phosphatases YP_003280514.1 COG0036, Rpe, Pentose-5-phosphate-3-epimerase YP_003280515.1 COG2967, ApaG, Uncharacterized protein affecting Mg2+/Co2+transport YP_003280516.1 COG4389, Site-specific recombinase YP_003280517.1 COG0611, ThiL, Thiamine monophosphate kinase YP_003280518.1 COG5316, Uncharacterized conserved protein YP_003280519.1 COG1267, PgpA, Phosphatidylglycerophosphatase A and related proteins YP_003280520.1 COG1546, CinA, Uncharacterized protein (competence- andmitomycin-induced) YP_003280521.1 COG4655, Predicted membrane protein YP_003280523.1 COG5010, TadD, Flp pilus assembly protein TadD YP_003280524.1 COG2064, TadC, Flp pilus assembly protein TadC YP_003280525.1 COG4965, TadB, Flp pilus assembly protein TadB YP_003280526.1 COG4962, CpaF, Flp pilus assembly protein YP_003280527.1 COG4963, CpaE, Flp pilus assembly protein YP_003280528.1 COG4964, CpaC, Flp pilus assembly protein YP_003280529.1 COG3745, CpaB, Flp pilus assembly protein CpaB YP_003280530.1 COG4961, TadG, Flp pilus assembly protein TadG YP_003280531.1 COG1396, HipB, Predicted transcriptional regulators YP_003280532.1 COG3318, Predicted metal-binding protein related to theC-terminal domain of SecA YP_003280533.1 COG0069, GltB, Glutamate synthase domain 2 YP_003280534.1 COG1718, RIO1, Serine/threonine protein kinase involved in cellcycle control YP_003280535.1 COG1301, GltP, Na+/H+-dicarboxylate symporters YP_003280536.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003280537.1 COG4531, ZnuA, ABC-type Zn2+ transport system YP_003280538.1 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synthetases YP_003280539.1 COG3791, Uncharacterized conserved protein YP_003280540.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003280541.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280543.1 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_003280544.1 COG0491, GloB, Zn-dependent hydrolases YP_003280545.1 COG1414, IclR, Transcriptional regulator YP_003280546.1 COG1414, IclR, Transcriptional regulator YP_003280547.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280548.1 COG2124, CypX, Cytochrome P450 YP_003280549.1 COG3281, Ble, Uncharacterized protein YP_003280550.1 COG0829, UreH, Urease accessory protein UreH YP_003280551.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280552.1 COG2175, TauD, Probable taurine catabolism dioxygenase YP_003280553.1 COG0410, LivF, ABC-type branched-chain amino acid transportsystems YP_003280554.1 COG4674, Uncharacterized ABC-type transport system YP_003280555.1 COG4177, LivM, ABC-type branched-chain amino acid transport system YP_003280556.1 COG0559, LivH, Branched-chain amino acid ABC-type transport system YP_003280557.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003280558.1 COG5266, CbiK, ABC-type Co2+ transport system YP_003280559.1 COG1629, CirA, Outer membrane receptor proteins YP_003280560.1 COG3568, ElsH, Metal-dependent hydrolase YP_003280561.1 COG0831, UreA, Urea amidohydrolase (urease) gamma subunit YP_003280562.1 COG2370, HupE, Hydrogenase/urease accessory protein YP_003280563.1 COG0832, UreB, Urea amidohydrolase (urease) beta subunit YP_003280564.1 COG1280, RhtB, Putative threonine efflux protein YP_003280565.1 COG0804, UreC, Urea amidohydrolase (urease) alpha subunit YP_003280566.1 COG2105, Uncharacterized conserved protein YP_003280567.1 COG2371, UreE, Urease accessory protein UreE YP_003280568.1 COG0830, UreF, Urease accessory protein UreF YP_003280569.1 COG2329, Uncharacterized enzyme involved in biosynthesisof extracellular polysaccharides YP_003280570.1 COG0378, HypB, Ni2+-binding GTPase involved in regulation ofexpression and maturation of urease and hydrogenase YP_003280571.1 COG0456, RimI, Acetyltransferases YP_003280572.1 COG0722, AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)synthase YP_003280573.1 COG2076, EmrE, Membrane transporters of cations and cationic drugs YP_003280574.1 COG3667, PcoB, Uncharacterized protein involved in copperresistance YP_003280575.1 COG2514, Predicted ring-cleavage extradiol dioxygenase YP_003280576.1 COG1569, Predicted nucleic acid-binding protein YP_003280577.1 COG0116, Predicted N6-adenine-specific DNA methylase YP_003280578.1 COG0073, ARC1, EMAP domain YP_003280579.1 COG2848, Uncharacterized conserved protein YP_003280580.1 COG3555, Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_003280581.1 COG1508, RpoN, DNA-directed RNA polymerase specialized sigmasubunit YP_003280582.1 COG1137, YhbG, ABC-type (unclassified) transport system YP_003280583.1 COG1934, Uncharacterized protein conserved in bacteria YP_003280584.1 COG1651, DsbG, Protein-disulfide isomerase YP_003280585.1 COG3087, FtsN, Cell division protein YP_003280586.1 COG0018, ArgS, Arginyl-tRNA synthetase YP_003280587.1 COG3556, Predicted membrane protein YP_003280588.1 COG0583, LysR, Transcriptional regulator YP_003280589.1 COG0642, BaeS, Signal transduction histidine kinase YP_003280590.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003280591.1 COG4054, McrB, Methyl coenzyme M reductase YP_003280593.1 COG2225, AceB, Malate synthase YP_003280595.1 COG1942, Uncharacterized protein YP_003280596.1 COG1942, Uncharacterized protein YP_003280597.1 COG0121, Predicted glutamine amidotransferase YP_003280598.1 COG0189, RimK, Glutathione synthase/Ribosomal protein S6modification enzyme (glutaminyl transferase) YP_003280599.1 COG3135, BenE, Uncharacterized protein involved in benzoatemetabolism YP_003280600.1 COG3158, Kup, K+ transporter YP_003280601.1 COG1524, Uncharacterized proteins of the AP superfamily YP_003280602.1 COG0168, TrkG, Trk-type K+ transport systems YP_003280603.1 COG0569, TrkA, K+ transport systems YP_003280604.1 COG0014, ProA, Gamma-glutamyl phosphate reductase YP_003280605.1 COG0643, CheA, Chemotaxis protein histidine kinase and related kinases YP_003280606.1 COG1466, HolA, DNA polymerase III YP_003280607.1 COG2980, RlpB, Rare lipoprotein B YP_003280608.1 COG0495, LeuS, Leucyl-tRNA synthetase YP_003280609.1 COG0815, Lnt, Apolipoprotein N-acyltransferase YP_003280610.1 COG0668, MscS, Small-conductance mechanosensitive channel YP_003280611.1 COG0693, ThiJ, Putative intracellular protease/amidase YP_003280612.1 COG4321, Uncharacterized protein related to arylsulfatesulfotransferase involved in siderophore biosynthesis YP_003280613.1 COG3187, HslJ, Heat shock protein YP_003280614.1 COG5373, Predicted membrane protein YP_003280615.1 COG3118, Thioredoxin domain-containing protein YP_003280616.1 COG1131, CcmA, ABC-type multidrug transport system YP_003280618.1 COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_003280619.1 COG0026, PurK, Phosphoribosylaminoimidazole carboxylase (NCAIRsynthetase) YP_003280620.1 COG0009, SUA5, Putative translation factor (SUA5) YP_003280621.1 COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transportsystems YP_003280622.1 COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003280623.1 COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transportsystem YP_003280624.1 COG2132, SufI, Putative multicopper oxidases YP_003280625.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003280626.1 COG3047, OmpW, Outer membrane protein W YP_003280627.1 COG3240, Phospholipase/lecithinase/hemolysin YP_003280628.1 COG2027, DacB, D-alanyl-D-alanine carboxypeptidase(penicillin-binding protein 4) YP_003280629.1 COG1214, Inactive homolog of metal-dependent proteases YP_003280630.1 COG0456, RimI, Acetyltransferases YP_003280631.1 COG1573, Uracil-DNA glycosylase YP_003280632.1 COG0598, CorA, Mg2+ and Co2+ transporters YP_003280633.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003280634.1 COG2055, Malate/L-lactate dehydrogenases YP_003280635.1 COG1802, GntR, Transcriptional regulators YP_003280636.1 COG1638, DctP, TRAP-type C4-dicarboxylate transport system YP_003280637.1 COG1593, DctQ, TRAP-type C4-dicarboxylate transport system YP_003280638.1 COG3090, DctM, TRAP-type C4-dicarboxylate transport system YP_003280639.1 COG5422, ROM1, RhoGEF YP_003280640.1 COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminatelyase YP_003280641.1 COG2271, UhpC, Sugar phosphate permease YP_003280642.1 COG3203, OmpC, Outer membrane protein (porin) YP_003280643.1 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases)family 1 YP_003280644.1 COG0251, TdcF, Putative translation initiation inhibitor YP_003280645.1 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases YP_003280646.1 COG1637, Predicted nuclease of the RecB family YP_003280647.1 COG1760, SdaA, L-serine deaminase YP_003280648.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280649.1 COG2514, Predicted ring-cleavage extradiol dioxygenase YP_003280650.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003280651.1 COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes YP_003280652.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003280653.1 COG1414, IclR, Transcriptional regulator YP_003280654.1 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_003280655.1 COG0775, Pfs, Nucleoside phosphorylase YP_003280656.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280657.1 COG1712, Predicted dinucleotide-utilizing enzyme YP_003280658.1 COG1414, IclR, Transcriptional regulator YP_003280659.1 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/betahydrolase superfamily) YP_003280660.1 COG1917, Uncharacterized conserved protein YP_003280661.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003280662.1 COG0191, Fba, Fructose/tagatose bisphosphate aldolase YP_003280663.1 COG0642, BaeS, Signal transduction histidine kinase YP_003280664.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003280665.1 COG3907, PAP2 (acid phosphatase) superfamily protein YP_003280666.1 COG3907, PAP2 (acid phosphatase) superfamily protein YP_003280667.1 COG0671, PgpB, Membrane-associated phospholipid phosphatase YP_003280668.1 COG0469, PykF, Pyruvate kinase YP_003280670.1 COG0006, PepP, Xaa-Pro aminopeptidase YP_003280671.1 COG0730, Predicted permeases YP_003280672.1 COG5634, Uncharacterized conserved protein YP_003280673.1 COG1208, GCD1, Nucleoside-diphosphate-sugar pyrophosphorylaseinvolved in lipopolysaccharide biosynthesis/translationinitiation factor 2B YP_003280674.1 COG0021, TktA, Transketolase YP_003280675.1 COG0057, GapA, Glyceraldehyde-3-phosphatedehydrogenase/erythrose-4- phosphate dehydrogenase YP_003280676.1 COG0705, GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_003280677.1 COG1178, ThiP, ABC-type Fe3+ transport system YP_003280678.1 COG1765, Predicted redox protein YP_003280679.1 COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase YP_003280680.1 COG1741, Pirin-related protein YP_003280681.1 COG1027, AspA, Aspartate ammonia-lyase YP_003280682.1 COG4849, Uncharacterized protein conserved in bacteria YP_003280683.1 COG0848, ExbD, Biopolymer transport protein YP_003280684.1 COG0811, TolQ, Biopolymer transport proteins YP_003280685.1 COG0289, DapB, Dihydrodipicolinate reductase YP_003280686.1 COG2913, SmpA, Small protein A (tmRNA-binding) YP_003280687.1 COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins YP_003280688.1 COG5267, Uncharacterized protein conserved in bacteria YP_003280689.1 COG4102, Uncharacterized protein conserved in bacteria YP_003280690.1 COG1493, HprK, Serine kinase of the HPr protein YP_003280691.1 COG1762, PtsN, Phosphotransferase system mannitol/fructose-specificIIA domain (Ntr-type) YP_003280692.1 COG1544, Ribosome-associated protein Y (PSrp-1) YP_003280693.1 COG0152, PurC, Phosphoribosylaminoimidazolesuccinocarboxamide(SAICAR) synthase YP_003280694.1 COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_003280695.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280696.1 COG0527, LysC, Aspartokinases YP_003280697.1 COG1012, PutA, NAD-dependent aldehyde dehydrogenases YP_003280698.1 COG0583, LysR, Transcriptional regulator YP_003280699.1 COG1741, Pirin-related protein YP_003280700.1 COG0625, Gst, Glutathione S-transferase YP_003280701.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280702.1 COG0583, LysR, Transcriptional regulator YP_003280703.1 COG0725, ModA, ABC-type molybdate transport system YP_003280704.1 COG4625, Uncharacterized protein with a C-terminal OMP(outer membrane protein) domain YP_003280705.1 COG3803, Uncharacterized protein conserved in bacteria YP_003280706.1 COG4372, Uncharacterized protein conserved in bacteriawith the myosin-like domain YP_003280708.1 COG0834, HisJ, ABC-type amino acid transport/signal transductionsystems YP_003280709.1 COG3148, Uncharacterized conserved protein YP_003280710.1 COG3451, VirB4, Type IV secretory pathway YP_003280711.1 COG4106, Tam, Trans-aconitate methyltransferase YP_003280712.1 COG3677, Transposase and inactivated derivatives YP_003280713.1 COG0346, GloA, Lactoylglutathione lyase and related lyases YP_003280714.1 COG1853, Conserved protein/domain typically associatedwith flavoprotein oxygenases YP_003280715.1 COG4564, Signal transduction histidine kinase YP_003280716.1 COG4585, Signal transduction histidine kinase YP_003280717.1 COG0604, Qor, NADPH:quinone reductase and related Zn-dependentoxidoreductases YP_003280718.1 COG1733, Predicted transcriptional regulators YP_003280719.1 COG1335, PncA, Amidases related to nicotinamidase YP_003280720.1 COG1335, PncA, Amidases related to nicotinamidase YP_003280721.1 COG1741, Pirin-related protein YP_003280722.1 COG0583, LysR, Transcriptional regulator YP_003280723.1 COG0386, BtuE, Glutathione peroxidase YP_003280724.1 COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein YP_003280725.1 COG0591, PutP, Na+/proline symporter YP_003280726.1 COG4290, Guanyl-specific ribonuclease Sa YP_003280727.1 COG2732, Barstar YP_003280728.1 COG0861, TerC, Membrane protein TerC YP_003280729.1 COG2197, CitB, Response regulator containing a CheY-like receiverdomain and an HTH DNA-binding domain YP_003280730.1 COG4585, Signal transduction histidine kinase YP_003280731.1 COG1420, HrcA, Transcriptional regulator of heat shock gene YP_003280732.1 COG0482, TrmU, Predicted tRNA(5-methylaminomethyl-2- thiouridylate)methyltransferase YP_003280733.1 COG0583, LysR, Transcriptional regulator YP_003280734.1 COG2610, GntT, H+/gluconate symporter and related permeases YP_003280735.1 COG1053, SdhA, Succinate dehydrogenase/fumarate reductase YP_003280736.1 COG0247, GlpC, Fe-S oxidoreductase YP_003280737.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280738.1 COG2128, Uncharacterized conserved protein YP_003280739.1 COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit YP_003280740.1 COG0405, Ggt, Gamma-glutamyltransferase YP_003280742.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280743.1 COG0583, LysR, Transcriptional regulator YP_003280744.1 COG5006, Predicted permease YP_003280745.1 COG1051, ADP-ribose pyrophosphatase YP_003280746.1 COG0456, RimI, Acetyltransferases YP_003280747.1 COG3205, Predicted membrane protein YP_003280748.1 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoateaminotransferase YP_003280749.1 COG0030, KsgA, Dimethyladenosine transferase (rRNA methylation) YP_003280750.1 COG0760, SurA, Parvulin-like peptidyl-prolyl isomerase YP_003280751.1 COG1452, Imp, Organic solvent tolerance protein OstA YP_003280752.1 COG3178, Predicted phosphotransferase related to Ser/Thrprotein kinases YP_003280753.1 COG1385, Uncharacterized protein conserved in bacteria YP_003280754.1 COG2135, Uncharacterized conserved protein YP_003280756.1 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelatedesuccinylase and related deacylases YP_003280757.1 COG0840, Tar, Methyl-accepting chemotaxis protein YP_003280758.1 COG2226, UbiE, Methylase involved in ubiquinone/menaquinonebiosynthesis YP_003280759.1 COG2021, MET2, Homoserine acetyltransferase YP_003280760.1 COG2119, Predicted membrane protein YP_003280761.1 COG0724, RNA-binding proteins (RRM domain) YP_003280762.1 COG0724, RNA-binding proteins (RRM domain) YP_003280763.1 COG0300, DltE, Short-chain dehydrogenases of various substratespecificities YP_003280764.1 COG3117, Uncharacterized protein conserved in bacteria YP_003280765.1 COG1778, Low specificity phosphatase (HAD superfamily) YP_003280766.1 COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation YP_003280767.1 COG0503, Apt, Adenine/guanine phosphoribosyltransferases andrelated PRPP-binding proteins YP_003280769.1 COG0664, Crp, cAMP-binding proteins - catabolite gene activator andregulatory subunit of cAMP-dependent protein kinases YP_003280770.1 COG0126, Pgk, 3-phosphoglycerate kinase YP_003280771.1 COG4392, Predicted membrane protein YP_003280772.1 COG1296, AzlC, Predicted branched-chain amino acid permease(azaleucine resistance) YP_003280773.1 COG0223, Fmt, Methionyl-tRNA formyltransferase YP_003280774.1 COG3894, Uncharacterized metal-binding protein YP_003280775.1 COG0242, Def, N-formylmethionyl-tRNA deformylase YP_003280776.1 COG1652, XkdP, Uncharacterized protein containing LysM domain YP_003280777.1 COG0758, Smf, Predicted Rossmann fold nucleotide-binding proteininvolved in DNA uptake YP_003280778.1 COG4102, Uncharacterized protein conserved in bacteria YP_003280779.1 COG0341, SecF, Preprotein translocase subunit SecF YP_003280780.1 COG0342, SecD, Preprotein translocase subunit SecD YP_003280781.1 COG1862, YajC, Preprotein translocase subunit YajC YP_003280782.1 COG4231, Indolepyruvate ferredoxin oxidoreductase YP_003280783.1 COG1522, Lrp, Transcriptional regulators YP_003280784.1 COG2814, AraJ, Arabinose efflux permease YP_003280785.1 COG2821, MltA, Membrane-bound lytic murein transglycosylase YP_003280786.1 COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_003280787.1 COG4566, TtrR, Response regulator YP_003280788.1 COG4191, Signal transduction histidine kinase regulatingC4-dicarboxylate transport system YP_003280789.1 COG0388, Predicted amidohydrolase YP_003280790.1 COG3164, Predicted membrane protein YP_003280791.1 COG1391, GlnE, Glutamine synthetase adenylyltransferase YP_003280792.1 COG0625, Gst, Glutathione S-transferase YP_003280793.1 COG0015, PurB, Adenylosuccinate lyase YP_003280794.1 COG4681, Uncharacterized protein conserved in bacteria YP_003280795.1 COG3313, Predicted Fe-S protein YP_003280796.1 COG0861, TerC, Membrane protein TerC YP_003280797.1 COG0746, MobA, Molybdopterin-guanine dinucleotide biosynthesisprotein A YP_003280798.1 COG1950, Predicted membrane protein YP_003280799.1 COG4783, Putative Zn-dependent protease YP_003280800.1 COG0315, MoaC, Molybdenum cofactor biosynthesis enzyme YP_003280801.1 COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes YP_003280802.1 COG4969, PilA, Tfp pilus assembly protein YP_003280803.1 COG1716, FOG: FHA domain YP_003280804.1 COG0629, Ssb, Single-stranded DNA-binding protein YP_003280805.1 COG2814, AraJ, Arabinose efflux permease YP_003280806.1 COG0178, UvrA, Excinuclease ATPase subunit YP_003280807.1 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) YP_003280808.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280809.1 COG0583, LysR, Transcriptional regulator YP_003280810.1 COG0284, PyrF, Orotidine-5'-phosphate decarboxylase YP_003280811.1 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily YP_003280812.1 COG0262, FolA, Dihydrofolate reductase YP_003280813.1 COG2050, PaaI, Uncharacterized protein YP_003280814.1 COG0789, SoxR, Predicted transcriptional regulators YP_003280815.1 COG0861, TerC, Membrane protein TerC YP_003280816.1 COG0074, SucD, Succinyl-CoA synthetase YP_003280817.1 COG0045, SucC, Succinyl-CoA synthetase YP_003280818.1 COG0002, ArgC, Acetylglutamate semialdehyde dehydrogenase YP_003280819.1 COG2271, UhpC, Sugar phosphate permease YP_003280820.1 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT)superfamily YP_003280821.1 COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems YP_003280822.1 COG2137, OraA, Uncharacterized protein conserved in bacteria YP_003280823.1 COG0468, RecA, RecA/RadA recombinase YP_003280824.1 COG1846, MarR, Transcriptional regulators YP_003280825.1 COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain YP_003280826.1 COG0642, BaeS, Signal transduction histidine kinase YP_003280827.1 COG3181, Uncharacterized protein conserved in bacteria YP_003280828.1 COG5373, Predicted membrane protein YP_003280829.1 COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase YP_003280830.1 COG2940, Proteins containing SET domain YP_003280831.1 COG0550, TopA, Topoisomerase IA YP_003280832.1 COG1309, AcrR, Transcriptional regulator YP_003280833.1 COG0683, LivK, ABC-type branched-chain amino acid transportsystems YP_003280834.1 COG1960, CaiA, Acyl-CoA dehydrogenases YP_003280835.1 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligasesII YP_003280836.1 COG2365, Protein tyrosine/serine phosphatase YP_003280837.1 COG3221, PhnD, ABC-type phosphate/phosphonate transport system YP_003280838.1 COG0281, SfcA, Malic enzyme YP_003280839.1 COG2194, Predicted membrane-associated YP_003280840.1 COG0486, ThdF, Predicted GTPase YP_003280841.1 COG4127, Uncharacterized conserved protein YP_003280842.1 COG0706, YidC, Preprotein translocase subunit YidC YP_003280843.1 COG0759, Uncharacterized conserved protein YP_003280844.1 COG0594, RnpA, RNase P protein component YP_003280845.1 COG0230, RpmH, Ribosomal protein L34