-- dump date 20120504_143143 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_180756.1 57233687 3229150 261..1598 1 NC_002936.3 identified by similarity to SP:P05648; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 1598 dnaA 3229150 dnaA Dehalococcoides ethenogenes 195 chromosomal replication initiator protein DnaA YP_180756.1 261 D 243164 CDS YP_180757.1 57233686 3229149 1924..3198 1 NC_002936.3 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3198 obgE 3229149 obgE Dehalococcoides ethenogenes 195 GTPase ObgE YP_180757.1 1924 D 243164 CDS YP_180758.1 57233677 3229140 3186..3800 1 NC_002936.3 identified by match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate (nicotinamide) nucleotide adenylyltransferase 3800 nadD 3229140 nadD Dehalococcoides ethenogenes 195 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_180758.1 3186 D 243164 CDS YP_180759.1 57233676 3229139 complement(3881..5809) 1 NC_002936.3 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; DNA gyrase, B subunit 5809 gyrB 3229139 gyrB Dehalococcoides ethenogenes 195 DNA gyrase, B subunit YP_180759.1 3881 R 243164 CDS YP_180760.1 57233675 3229138 complement(6013..8199) 1 NC_002936.3 identified by similarity to SP:O54408; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase 8199 relA 3229138 relA Dehalococcoides ethenogenes 195 GTP pyrophosphokinase YP_180760.1 6013 R 243164 CDS YP_180761.1 57233674 3229137 8328..9584 1 NC_002936.3 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 9584 hisS 3229137 hisS Dehalococcoides ethenogenes 195 histidyl-tRNA synthetase YP_180761.1 8328 D 243164 CDS YP_180762.1 57233673 3229136 9581..10744 1 NC_002936.3 hypothetical protein 10744 3229136 DET0007 Dehalococcoides ethenogenes 195 hypothetical protein YP_180762.1 9581 D 243164 CDS YP_180763.1 57233672 3229135 complement(10741..11367) 1 NC_002936.3 identified by similarity to OMNI:EF1643; membrane protein 11367 3229135 DET0008 Dehalococcoides ethenogenes 195 membrane protein YP_180763.1 10741 R 243164 CDS YP_180764.1 57233671 3229134 complement(11400..12320) 1 NC_002936.3 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 12320 ilvE 3229134 ilvE Dehalococcoides ethenogenes 195 branched-chain amino acid aminotransferase YP_180764.1 11400 R 243164 CDS YP_180765.1 57233661 3229124 12308..12463 1 NC_002936.3 hypothetical protein 12463 3229124 DET0010 Dehalococcoides ethenogenes 195 hypothetical protein YP_180765.1 12308 D 243164 CDS YP_180766.1 57233660 3229123 complement(12471..13643) 1 NC_002936.3 identified by match to protein family HMM PF00817; DNA polymerase IV 13643 3229123 DET0011 Dehalococcoides ethenogenes 195 DNA polymerase IV YP_180766.1 12471 R 243164 CDS YP_180767.1 57233659 3229122 complement(13643..13831) 1 NC_002936.3 identified by similarity to OMNI:NTL01TT2569; hypothetical protein 13831 3229122 DET0012 Dehalococcoides ethenogenes 195 hypothetical protein YP_180767.1 13643 R 243164 CDS YP_180768.1 57233658 3229121 complement(13903..14715) 1 NC_002936.3 identified by similarity to SP:Q9P9M3; match to protein family HMM TIGR02127; orotidine 5'-phosphate decarboxylase 14715 pyrF 3229121 pyrF Dehalococcoides ethenogenes 195 orotidine 5'-phosphate decarboxylase YP_180768.1 13903 R 243164 CDS YP_180769.1 57233657 3229120 14863..15558 1 NC_002936.3 hypothetical protein 15558 3229120 DET0014 Dehalococcoides ethenogenes 195 hypothetical protein YP_180769.1 14863 D 243164 CDS YP_180770.1 57233656 3229119 15597..16391 1 NC_002936.3 lipoprotein 16391 3229119 DET0015 Dehalococcoides ethenogenes 195 lipoprotein YP_180770.1 15597 D 243164 CDS YP_180771.1 57233655 3229118 16437..17756 1 NC_002936.3 identified by similarity to GP:4930039; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01499; folylpolyglutamate synthetase 17756 3229118 DET0016 Dehalococcoides ethenogenes 195 folylpolyglutamate synthetase YP_180771.1 16437 D 243164 CDS YP_180772.1 57233654 3229117 complement(17736..17951) 1 NC_002936.3 hypothetical protein 17951 3229117 DET0017 Dehalococcoides ethenogenes 195 hypothetical protein YP_180772.1 17736 R 243164 CDS YP_180773.1 57233653 3229116 complement(17965..18228) 1 NC_002936.3 hypothetical protein 18228 3229116 DET0018 Dehalococcoides ethenogenes 195 hypothetical protein YP_180773.1 17965 R 243164 CDS YP_180774.1 57233644 3229107 18528..18989 1 NC_002936.3 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 18989 dtd 3229107 dtd Dehalococcoides ethenogenes 195 D-tyrosyl-tRNA(Tyr) deacylase YP_180774.1 18528 D 243164 CDS YP_180775.1 57233643 3229106 19041..19469 1 NC_002936.3 identified by similarity to OMNI:NTL01TT1159; FUR family transcriptional regulator 19469 3229106 DET0020 Dehalococcoides ethenogenes 195 FUR family transcriptional regulator YP_180775.1 19041 D 243164 CDS YP_180776.1 57233642 3229105 complement(19524..20276) 1 NC_002936.3 identified by similarity to OMNI:MJ1433; hypothetical protein 20276 3229105 DET0021 Dehalococcoides ethenogenes 195 hypothetical protein YP_180776.1 19524 R 243164 CDS YP_180777.1 57233641 3229104 20379..20765 1 NC_002936.3 hypothetical protein 20765 3229104 DET0022 Dehalococcoides ethenogenes 195 hypothetical protein YP_180777.1 20379 D 243164 CDS YP_180778.1 57233640 3229103 complement(20846..20986) 1 NC_002936.3 hypothetical protein 20986 3229103 DET0023 Dehalococcoides ethenogenes 195 hypothetical protein YP_180778.1 20846 R 243164 CDS YP_180779.1 57233639 3229102 complement(21043..23430) 1 NC_002936.3 identified by match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; DNA internalization-related competence protein ComEC/Rec2 23430 3229102 DET0024 Dehalococcoides ethenogenes 195 DNA internalization-related competence protein ComEC/Rec2 YP_180779.1 21043 R 243164 CDS YP_180780.1 57233638 3229101 complement(23427..23927) 1 NC_002936.3 identified by similarity to SP:P39694; competence protein ComEA 23927 3229101 DET0025 Dehalococcoides ethenogenes 195 competence protein ComEA YP_180780.1 23427 R 243164 CDS YP_180781.1 57233637 3229100 complement(24098..24763) 1 NC_002936.3 identified by similarity to SP:P23868; match to protein family HMM PF02080; potassium uptake protein 24763 3229100 DET0026 Dehalococcoides ethenogenes 195 potassium uptake protein YP_180781.1 24098 R 243164 CDS YP_180782.1 57233630 3229092 complement(24768..25172) 1 NC_002936.3 identified by similarity to SP:Q53949; potassium uptake protein 25172 3229092 DET0027 Dehalococcoides ethenogenes 195 potassium uptake protein YP_180782.1 24768 R 243164 CDS YP_180783.1 57233629 3229091 complement(25176..25604) 1 NC_002936.3 universal stress protein 25604 3229091 DET0028 Dehalococcoides ethenogenes 195 universal stress protein YP_180783.1 25176 R 243164 CDS YP_180784.1 57233628 3229090 complement(25680..27125) 1 NC_002936.3 identified by similarity to SP:P21166; Trk system potassium uptake protein 27125 3229090 DET0029 Dehalococcoides ethenogenes 195 Trk system potassium uptake protein YP_180784.1 25680 R 243164 CDS YP_180785.1 57233627 3229089 complement(27129..28493) 1 NC_002936.3 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 28493 trkA 3229089 trkA Dehalococcoides ethenogenes 195 potassium transporter peripheral membrane component YP_180785.1 27129 R 243164 CDS YP_180786.1 57233626 3229088 complement(28497..28649) 1 NC_002936.3 hypothetical protein 28649 3229088 DET0031 Dehalococcoides ethenogenes 195 hypothetical protein YP_180786.1 28497 R 243164 CDS YP_180787.1 57233625 3229087 complement(28782..29732) 1 NC_002936.3 identified by match to protein family HMM TIGR01297; cation efflux family protein 29732 3229087 DET0032 Dehalococcoides ethenogenes 195 cation efflux family protein YP_180787.1 28782 R 243164 CDS YP_180788.1 57233624 3229086 29881..30510 1 NC_002936.3 identified by similarity to OMNI:NTL01CA3047; hypothetical protein 30510 3229086 DET0033 Dehalococcoides ethenogenes 195 hypothetical protein YP_180788.1 29881 D 243164 CDS YP_180789.1 57233623 3229085 30503..31504 1 NC_002936.3 phosphate transporter 31504 3229085 DET0034 Dehalococcoides ethenogenes 195 phosphate transporter YP_180789.1 30503 D 243164 CDS YP_180790.1 57233615 3229077 complement(31501..32121) 1 NC_002936.3 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 32121 gmk 3229077 gmk Dehalococcoides ethenogenes 195 guanylate kinase YP_180790.1 31501 R 243164 CDS YP_180791.1 57233614 3229076 complement(32099..32389) 1 NC_002936.3 hypothetical protein 32389 3229076 DET0036 Dehalococcoides ethenogenes 195 hypothetical protein YP_180791.1 32099 R 243164 CDS YP_180792.1 57233613 3229075 32598..33446 1 NC_002936.3 ferredoxin-NADP(+) reductase subunit alpha 33446 3229075 DET0037 Dehalococcoides ethenogenes 195 ferredoxin-NADP(+) reductase subunit alpha YP_180792.1 32598 D 243164 CDS YP_180793.1 57233612 3229074 33439..34836 1 NC_002936.3 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 34836 gltA 3229074 gltA Dehalococcoides ethenogenes 195 oxidoreductase YP_180793.1 33439 D 243164 CDS YP_180794.1 57233611 3229073 complement(34833..35045) 1 NC_002936.3 identified by similarity to GP:12248364; hypothetical protein 35045 3229073 DET0039 Dehalococcoides ethenogenes 195 hypothetical protein YP_180794.1 34833 R 243164 CDS YP_180795.1 57233610 3229072 complement(35156..35689) 1 NC_002936.3 hypothetical protein 35689 3229072 DET0040 Dehalococcoides ethenogenes 195 hypothetical protein YP_180795.1 35156 R 243164 CDS YP_180796.1 57233609 3229071 complement(35760..36266) 1 NC_002936.3 identified by similarity to SP:P31113; quinone methlytransferase 36266 3229071 DET0041 Dehalococcoides ethenogenes 195 quinone methlytransferase YP_180796.1 35760 R 243164 CDS YP_180797.1 57233608 3229070 complement(36271..36363) 1 NC_002936.3 hypothetical protein 36363 3229070 DET0042 Dehalococcoides ethenogenes 195 hypothetical protein YP_180797.1 36271 R 243164 CDS YP_180798.1 57233599 3229061 complement(36374..36568) 1 NC_002936.3 identified by similarity to SP:P08986; hypothetical protein 36568 3229061 DET0043 Dehalococcoides ethenogenes 195 hypothetical protein YP_180798.1 36374 R 243164 CDS YP_180799.1 57233598 3229060 36711..37082 1 NC_002936.3 identified by similarity to GP:29607780; hypothetical protein 37082 3229060 DET0044 Dehalococcoides ethenogenes 195 hypothetical protein YP_180799.1 36711 D 243164 CDS YP_180800.1 57233597 3229059 37216..37662 1 NC_002936.3 identified by similarity to OMNI:CT0642; match to protein family HMM TIGR01909; redox family protein 37662 3229059 DET0045 Dehalococcoides ethenogenes 195 redox family protein YP_180800.1 37216 D 243164 CDS YP_180801.1 57233596 3229058 complement(37659..38762) 1 NC_002936.3 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 38762 3229058 DET0046 Dehalococcoides ethenogenes 195 GTP-dependent nucleic acid-binding protein EngD YP_180801.1 37659 R 243164 CDS YP_180802.1 57233595 3229057 38985..40184 1 NC_002936.3 identified by similarity to SP:P28630; DNA polymerase III delta subunit-related protein 40184 3229057 DET0047 Dehalococcoides ethenogenes 195 DNA polymerase III delta subunit-related protein YP_180802.1 38985 D 243164 CDS YP_180803.1 57233594 3229056 40186..40797 1 NC_002936.3 identified by similarity to GP:10198137; hypothetical protein 40797 3229056 DET0048 Dehalococcoides ethenogenes 195 hypothetical protein YP_180803.1 40186 D 243164 CDS YP_180804.1 57233593 3229055 40831..41841 1 NC_002936.3 identified by match to protein family HMM PF00480; ROK family protein 41841 3229055 DET0049 Dehalococcoides ethenogenes 195 ROK family protein YP_180804.1 40831 D 243164 CDS YP_180805.1 57233592 3229054 41957..44572 1 NC_002936.3 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 44572 alaS 3229054 alaS Dehalococcoides ethenogenes 195 alanyl-tRNA synthetase YP_180805.1 41957 D 243164 CDS YP_180806.1 57233582 3229044 44619..45020 1 NC_002936.3 identified by similarity to GP:28203196; match to protein family HMM TIGR00250; hypothetical protein 45020 3229044 DET0051 Dehalococcoides ethenogenes 195 hypothetical protein YP_180806.1 44619 D 243164 CDS YP_180807.1 57233581 3229043 45042..46220 1 NC_002936.3 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 46220 tgt 3229043 tgt Dehalococcoides ethenogenes 195 queuine tRNA-ribosyltransferase YP_180807.1 45042 D 243164 CDS YP_180808.1 57233580 3229042 46311..47453 1 NC_002936.3 alcohol dehydrogenase, iron-containing 47453 3229042 DET0053 Dehalococcoides ethenogenes 195 alcohol dehydrogenase, iron-containing YP_180808.1 46311 D 243164 CDS YP_180809.1 57233579 3229041 50873..51034 1 NC_002936.3 hypothetical protein 51034 3229041 DET0056 Dehalococcoides ethenogenes 195 hypothetical protein YP_180809.1 50873 D 243164 CDS YP_180810.1 57233578 3229040 51068..53542 1 NC_002936.3 identified by similarity to SP:P37571; match to protein family HMM PF00004; match to protein family HMM PF02861; ATP-dependent Clp protease, ATP-binding subunit ClpC 53542 clpC 3229040 clpC Dehalococcoides ethenogenes 195 ATP-dependent Clp protease, ATP-binding subunit ClpC YP_180810.1 51068 D 243164 CDS YP_180811.1 57233577 3229039 53762..55150 1 NC_002936.3 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 55150 radA 3229039 radA Dehalococcoides ethenogenes 195 DNA repair protein RadA YP_180811.1 53762 D 243164 CDS YP_180812.1 57233576 3229038 55137..55820 1 NC_002936.3 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 55820 ispD 3229038 ispD Dehalococcoides ethenogenes 195 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_180812.1 55137 D 243164 CDS YP_180813.1 57233568 3229030 55826..56299 1 NC_002936.3 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 56299 ispF 3229030 ispF Dehalococcoides ethenogenes 195 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_180813.1 55826 D 243164 CDS YP_180814.1 57233567 3229029 56303..57679 1 NC_002936.3 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 57679 cysS 3229029 cysS Dehalococcoides ethenogenes 195 cysteinyl-tRNA synthetase YP_180814.1 56303 D 243164 CDS YP_180815.1 57235097 3230569 complement(57770..59398) 1 NC_002936.3 resolvase domain-containing protein 59398 3230569 DET0063 Dehalococcoides ethenogenes 195 resolvase domain-containing protein YP_180815.1 57770 R 243164 CDS YP_180816.1 57233566 3229028 complement(59395..60327) 1 NC_002936.3 hypothetical protein 60327 3229028 DET0064 Dehalococcoides ethenogenes 195 hypothetical protein YP_180816.1 59395 R 243164 CDS YP_180817.1 57233565 3229027 complement(60943..61803) 1 NC_002936.3 identified by similarity to GP:3482866; virulence-related protein 61803 3229027 DET0065 Dehalococcoides ethenogenes 195 virulence-related protein YP_180817.1 60943 R 243164 CDS YP_180818.1 57233564 3229026 complement(61934..63169) 1 NC_002936.3 identified by match to protein family HMM PF01555; match to protein family HMM PF02195; DNA methylase 63169 3229026 DET0066 Dehalococcoides ethenogenes 195 DNA methylase YP_180818.1 61934 R 243164 CDS YP_180819.1 57233563 3229025 complement(63144..64328) 1 NC_002936.3 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 64328 metK-1 3229025 metK-1 Dehalococcoides ethenogenes 195 S-adenosylmethionine synthetase YP_180819.1 63144 R 243164 CDS YP_180820.1 57233562 3229024 complement(64901..64999) 1 NC_002936.3 hypothetical protein 64999 3229024 DET0068 Dehalococcoides ethenogenes 195 hypothetical protein YP_180820.1 64901 R 243164 CDS YP_180821.1 57233561 3229023 complement(64990..65346) 1 NC_002936.3 HNH endonuclease domain-containing protein 65346 3229023 DET0069 Dehalococcoides ethenogenes 195 HNH endonuclease domain-containing protein YP_180821.1 64990 R 243164 CDS YP_180822.1 57233560 3229022 complement(65454..65888) 1 NC_002936.3 hypothetical protein 65888 3229022 DET0070 Dehalococcoides ethenogenes 195 hypothetical protein YP_180822.1 65454 R 243164 CDS YP_180823.1 57233543 3229004 complement(66131..67672) 1 NC_002936.3 SNF2 family helicase 67672 3229004 DET0071 Dehalococcoides ethenogenes 195 SNF2 family helicase YP_180823.1 66131 R 243164 CDS YP_180824.1 57233571 3229033 complement(67896..70169) 1 NC_002936.3 identified by match to protein family HMM TIGR01613; phage/plasmid DNA primase 70169 3229033 DET0072 Dehalococcoides ethenogenes 195 phage/plasmid DNA primase YP_180824.1 67896 R 243164 CDS YP_180825.1 57233570 3229032 complement(70495..70914) 1 NC_002936.3 identified by similarity to OMNI:AF2353; hypothetical protein 70914 3229032 DET0073 Dehalococcoides ethenogenes 195 hypothetical protein YP_180825.1 70495 R 243164 CDS YP_180826.1 57233569 3229031 complement(70995..72935) 1 NC_002936.3 identified by similarity to SP:P06225; family A DNA-dependent DNA polymerase 72935 3229031 DET0074 Dehalococcoides ethenogenes 195 family A DNA-dependent DNA polymerase YP_180826.1 70995 R 243164 CDS YP_180827.1 57233559 3229021 73164..74357 1 NC_002936.3 hypothetical protein 74357 3229021 DET0075 Dehalococcoides ethenogenes 195 hypothetical protein YP_180827.1 73164 D 243164 CDS YP_180828.1 57233558 3229020 75226..75843 1 NC_002936.3 resolvase domain-containing protein 75843 3229020 DET0076 Dehalococcoides ethenogenes 195 resolvase domain-containing protein YP_180828.1 75226 D 243164 CDS YP_180829.1 57233557 3229019 76009..76266 1 NC_002936.3 hypothetical protein 76266 3229019 DET0077 Dehalococcoides ethenogenes 195 hypothetical protein YP_180829.1 76009 D 243164 CDS YP_180830.1 57233556 3229018 complement(76921..77205) 1 NC_002936.3 identified by similarity to GP:27228279; trichloroethene reductive dehalogenase anchoring protein 77205 3229018 DET0078 Dehalococcoides ethenogenes 195 trichloroethene reductive dehalogenase anchoring protein YP_180830.1 76921 R 243164 CDS YP_180831.1 57233555 3229017 complement(77229..78893) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; trichloroethene reductive dehalogenase 78893 tceA 3229017 tceA Dehalococcoides ethenogenes 195 trichloroethene reductive dehalogenase YP_180831.1 77229 R 243164 CDS YP_180832.1 57233554 3229016 79177..79710 1 NC_002936.3 hypothetical protein 79710 3229016 DET0080 Dehalococcoides ethenogenes 195 hypothetical protein YP_180832.1 79177 D 243164 CDS YP_180833.1 57233553 3229015 complement(79906..80883) 1 NC_002936.3 hypothetical protein 80883 3229015 DET0081 Dehalococcoides ethenogenes 195 hypothetical protein YP_180833.1 79906 R 243164 CDS YP_180834.1 57233552 3229013 complement(81781..82047) 1 NC_002936.3 identified by similarity to GP:2645860; ISDet1, transposase orfA 82047 3229013 DET0083 Dehalococcoides ethenogenes 195 ISDet1, transposase orfA YP_180834.1 81781 R 243164 CDS YP_180835.1 57235096 3230568 82185..82475 1 NC_002936.3 identified by similarity to SP:P21891; hypothetical protein 82475 3230568 DET0084 Dehalococcoides ethenogenes 195 hypothetical protein YP_180835.1 82185 D 243164 CDS YP_180836.1 57233551 3229012 complement(82975..83436) 1 NC_002936.3 hypothetical protein 83436 3229012 DET0085 Dehalococcoides ethenogenes 195 hypothetical protein YP_180836.1 82975 R 243164 CDS YP_180837.1 57233550 3229011 complement(83436..83621) 1 NC_002936.3 identified by similarity to SP:P23873; hipB protein 83621 3229011 DET0086 Dehalococcoides ethenogenes 195 hipB protein YP_180837.1 83436 R 243164 CDS YP_180838.1 57233549 3229010 complement(83691..85808) 1 NC_002936.3 hypothetical protein 85808 3229010 DET0087 Dehalococcoides ethenogenes 195 hypothetical protein YP_180838.1 83691 R 243164 CDS YP_180839.1 57233548 3229009 85832..86293 1 NC_002936.3 identified by similarity to GP:8163916; reductive dehalogenase domain-containing protein 86293 3229009 DET0088 Dehalococcoides ethenogenes 195 reductive dehalogenase domain-containing protein YP_180839.1 85832 D 243164 CDS YP_180840.1 57233547 3229008 86386..87237 1 NC_002936.3 radical SAM domain-containing protein 87237 3229008 DET0089 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_180840.1 86386 D 243164 CDS YP_180841.1 57233546 3229007 87234..88049 1 NC_002936.3 radical SAM domain-containing protein 88049 3229007 DET0090 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_180841.1 87234 D 243164 CDS YP_180842.1 57233545 3229006 88197..88715 1 NC_002936.3 hypothetical protein 88715 3229006 DET0091 Dehalococcoides ethenogenes 195 hypothetical protein YP_180842.1 88197 D 243164 CDS YP_180843.1 57233544 3229005 88814..89524 1 NC_002936.3 identified by similarity to GP:29899002; LuxR family DNA-binding response regulator 89524 3229005 DET0092 Dehalococcoides ethenogenes 195 LuxR family DNA-binding response regulator YP_180843.1 88814 D 243164 CDS YP_180844.1 57233542 3229003 89695..89820 1 NC_002936.3 hypothetical protein 89820 3229003 DET0093 Dehalococcoides ethenogenes 195 hypothetical protein YP_180844.1 89695 D 243164 CDS YP_180845.1 57233541 3229002 complement(89828..90022) 1 NC_002936.3 hypothetical protein 90022 3229002 DET0094 Dehalococcoides ethenogenes 195 hypothetical protein YP_180845.1 89828 R 243164 CDS YP_180846.1 57233540 3229001 complement(90038..92068) 1 NC_002936.3 identified by similarity to SP:P33650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; ferrous iron transport protein B 92068 feoB 3229001 feoB Dehalococcoides ethenogenes 195 ferrous iron transport protein B YP_180846.1 90038 R 243164 CDS YP_180847.1 57233539 3229000 complement(92065..92373) 1 NC_002936.3 identified by match to protein family HMM PF04023; feoA family protein 92373 3229000 DET0096 Dehalococcoides ethenogenes 195 feoA family protein YP_180847.1 92065 R 243164 CDS YP_180848.1 57233538 3228999 complement(92373..93089) 1 NC_002936.3 identified by match to protein family HMM PF02742; iron dependent repressor 93089 3228999 DET0097 Dehalococcoides ethenogenes 195 iron dependent repressor YP_180848.1 92373 R 243164 CDS YP_180849.1 57233537 3228998 complement(93341..93646) 1 NC_002936.3 identified by similarity to OMNI:NTL01PH01780; hypothetical protein 93646 3228998 DET0098 Dehalococcoides ethenogenes 195 hypothetical protein YP_180849.1 93341 R 243164 CDS YP_180850.1 57233536 3228997 complement(93748..94902) 1 NC_002936.3 mobA family protein 94902 3228997 DET0099 Dehalococcoides ethenogenes 195 mobA family protein YP_180850.1 93748 R 243164 CDS YP_180851.1 57233535 3228996 complement(94903..95592) 1 NC_002936.3 hypothetical protein 95592 3228996 DET0100 Dehalococcoides ethenogenes 195 hypothetical protein YP_180851.1 94903 R 243164 CDS YP_180852.1 57233534 3228995 complement(95615..98716) 1 NC_002936.3 identified by match to protein family HMM PF00384; match to protein family HMM PF04879; molybdopterin oxidoreductase 98716 3228995 DET0101 Dehalococcoides ethenogenes 195 molybdopterin oxidoreductase YP_180852.1 95615 R 243164 CDS YP_180853.1 57233533 3228994 complement(98820..100001) 1 NC_002936.3 molybdopterin oxidoreductase, membrane subunit 100001 3228994 DET0102 Dehalococcoides ethenogenes 195 molybdopterin oxidoreductase, membrane subunit YP_180853.1 98820 R 243164 CDS YP_180854.1 57233532 3228993 complement(100022..100960) 1 NC_002936.3 identified by similarity to SP:P32708; molybdopterin oxidoreductase, iron-sulfur binding subunit 100960 3228993 DET0103 Dehalococcoides ethenogenes 195 molybdopterin oxidoreductase, iron-sulfur binding subunit YP_180854.1 100022 R 243164 CDS YP_180855.1 57233531 3228992 101430..102416 1 NC_002936.3 hypothetical protein 102416 3228992 DET0104 Dehalococcoides ethenogenes 195 hypothetical protein YP_180855.1 101430 D 243164 CDS YP_180856.1 57235089 3230560 complement(103037..103876) 1 NC_002936.3 identified by similarity to GP:28202560; match to protein family HMM TIGR00762; degV family protein 103876 3230560 DET0105 Dehalococcoides ethenogenes 195 degV family protein YP_180856.1 103037 R 243164 CDS YP_180857.1 57235080 3230551 104074..105375 1 NC_002936.3 identified by match to protein family HMM PF04011; hypothetical protein 105375 3230551 DET0106 Dehalococcoides ethenogenes 195 hypothetical protein YP_180857.1 104074 D 243164 CDS YP_180858.1 57235079 3230550 105422..105559 1 NC_002936.3 hypothetical protein 105559 3230550 DET0107 Dehalococcoides ethenogenes 195 hypothetical protein YP_180858.1 105422 D 243164 CDS YP_180859.1 57235078 3230549 105582..107357 1 NC_002936.3 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase 107357 3230549 DET0108 Dehalococcoides ethenogenes 195 endonuclease/exonuclease/phosphatase YP_180859.1 105582 D 243164 CDS YP_180860.1 57235077 3230548 complement(107426..107908) 1 NC_002936.3 identified by similarity to SP:P37182; match to protein family HMM TIGR00072; hydrogenase maturation protease 107908 3230548 DET0109 Dehalococcoides ethenogenes 195 hydrogenase maturation protease YP_180860.1 107426 R 243164 CDS YP_180861.1 57235076 3230547 complement(107911..109491) 1 NC_002936.3 identified by similarity to SP:P21852; [Ni/Fe] hydrogenase, group 1, large subunit 109491 3230547 DET0110 Dehalococcoides ethenogenes 195 [Ni/Fe] hydrogenase, group 1, large subunit YP_180861.1 107911 R 243164 CDS YP_180862.1 57235075 3230546 complement(109522..110586) 1 NC_002936.3 identified by similarity to SP:P12943; match to protein family HMM PF01058; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409; [Ni/Fe] hydrogenase, group 1, small subunit 110586 3230546 DET0111 Dehalococcoides ethenogenes 195 [Ni/Fe] hydrogenase, group 1, small subunit YP_180862.1 109522 R 243164 CDS YP_180863.1 57235074 3230545 complement(110640..111443) 1 NC_002936.3 identified by similarity to SP:P33389; [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit 111443 3230545 DET0112 Dehalococcoides ethenogenes 195 [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit YP_180863.1 110640 R 243164 CDS YP_180864.1 57235065 3230536 111908..112024 1 NC_002936.3 hypothetical protein 112024 3230536 DET0113 Dehalococcoides ethenogenes 195 hypothetical protein YP_180864.1 111908 D 243164 CDS YP_180865.1 57235064 3230535 complement(112188..113261) 1 NC_002936.3 identified by similarity to SP:P46904; ABC transporter, substrate-binding protein 113261 3230535 DET0114 Dehalococcoides ethenogenes 195 ABC transporter, substrate-binding protein YP_180865.1 112188 R 243164 CDS YP_180866.1 57235063 3230534 complement(113258..114316) 1 NC_002936.3 identified by similarity to SP:P75774; similarity to OMNI:NTL01BMA0802; ABC transporter, permease 114316 3230534 DET0115 Dehalococcoides ethenogenes 195 ABC transporter, permease YP_180866.1 113258 R 243164 CDS YP_180867.1 57235062 3230532 complement(115191..115763) 1 NC_002936.3 identified by similarity to GB:AAN59033.1; transcriptional regulator 115763 3230532 DET0117 Dehalococcoides ethenogenes 195 transcriptional regulator YP_180867.1 115191 R 243164 CDS YP_180868.1 57235061 3230531 complement(116009..116551) 1 NC_002936.3 identified by match to protein family HMM TIGR01383; DJ-1 family protein 116551 3230531 DET0118 Dehalococcoides ethenogenes 195 DJ-1 family protein YP_180868.1 116009 R 243164 CDS YP_180869.1 57235060 3230530 116845..118599 1 NC_002936.3 catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 118599 oadA 3230530 oadA Dehalococcoides ethenogenes 195 pyruvate carboxylase subunit B YP_180869.1 116845 D 243164 CDS YP_180870.1 57235052 3230522 118589..120085 1 NC_002936.3 catalyzes the ATP-dependent carboxylation of a covalently attached biotin and the transfer of the carboxyl group to pyruvate forming oxaloacetate; pyruvate carboxylase subunit A 120085 accC 3230522 accC Dehalococcoides ethenogenes 195 pyruvate carboxylase subunit A YP_180870.1 118589 D 243164 CDS YP_180871.1 57235051 3230521 complement(120082..120369) 1 NC_002936.3 identified by similarity to OMNI:NTL01MT01686; hypothetical protein 120369 3230521 DET0121 Dehalococcoides ethenogenes 195 hypothetical protein YP_180871.1 120082 R 243164 CDS YP_180872.1 57235050 3230520 120397..120492 1 NC_002936.3 hypothetical protein 120492 3230520 DET0122 Dehalococcoides ethenogenes 195 hypothetical protein YP_180872.1 120397 D 243164 CDS YP_180873.1 57235049 3230519 complement(120504..122435) 1 NC_002936.3 pyridine nucleotide-disulphide oxidoreductase 122435 3230519 DET0123 Dehalococcoides ethenogenes 195 pyridine nucleotide-disulphide oxidoreductase YP_180873.1 120504 R 243164 CDS YP_180874.1 57235048 3230518 complement(122655..122798) 1 NC_002936.3 hypothetical protein 122798 3230518 DET0124 Dehalococcoides ethenogenes 195 hypothetical protein YP_180874.1 122655 R 243164 CDS YP_180875.1 57235047 3230517 122839..123864 1 NC_002936.3 identified by similarity to SP:P39400; alcohol dehydrogenase, zinc-containing 123864 3230517 DET0125 Dehalococcoides ethenogenes 195 alcohol dehydrogenase, zinc-containing YP_180875.1 122839 D 243164 CDS YP_180876.1 57235046 3230516 123885..125009 1 NC_002936.3 identified by similarity to SP:P22096; match to protein family HMM TIGR01245; anthranilate phosphoribosyltransferase 125009 trpD-1 3230516 trpD-1 Dehalococcoides ethenogenes 195 anthranilate phosphoribosyltransferase YP_180876.1 123885 D 243164 CDS YP_180877.1 57235045 3230515 complement(125140..128325) 1 NC_002936.3 identified by match to protein family HMM TIGR00229; sensory box sensor histidine kinase 128325 3230515 DET0127 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_180877.1 125140 R 243164 CDS YP_180878.1 57235036 3230506 complement(128406..129797) 1 NC_002936.3 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 129797 cobB 3230506 cobB Dehalococcoides ethenogenes 195 cobyrinic acid a,c-diamide synthase YP_180878.1 128406 R 243164 CDS YP_180879.1 57235035 3230505 complement(129837..130253) 1 NC_002936.3 identified by similarity to OMNI:TM1872; match to protein family HMM PF01894; hypothetical protein 130253 3230505 DET0129 Dehalococcoides ethenogenes 195 hypothetical protein YP_180879.1 129837 R 243164 CDS YP_180880.1 57235034 3230504 complement(130246..130617) 1 NC_002936.3 identified by similarity to SP:P13792; response regulator 130617 3230504 DET0130 Dehalococcoides ethenogenes 195 response regulator YP_180880.1 130246 R 243164 CDS YP_180881.1 57235033 3230503 complement(130704..131096) 1 NC_002936.3 identified by similarity to SP:Q00934; response regulator 131096 3230503 DET0131 Dehalococcoides ethenogenes 195 response regulator YP_180881.1 130704 R 243164 CDS YP_180882.1 57235032 3230502 complement(131241..131813) 1 NC_002936.3 rhomboid family protein 131813 3230502 DET0132 Dehalococcoides ethenogenes 195 rhomboid family protein YP_180882.1 131241 R 243164 CDS YP_180883.1 57235031 3230501 complement(132044..132256) 1 NC_002936.3 identified by similarity to OMNI:TM1786; hypothetical protein 132256 3230501 DET0133 Dehalococcoides ethenogenes 195 hypothetical protein YP_180883.1 132044 R 243164 CDS YP_180884.1 57235030 3230500 complement(132330..132749) 1 NC_002936.3 hypothetical protein 132749 3230500 DET0134 Dehalococcoides ethenogenes 195 hypothetical protein YP_180884.1 132330 R 243164 CDS YP_180885.1 57235029 3230499 132882..133574 1 NC_002936.3 identified by similarity to GB:BAA02453.1; DNA-binding response regulator 133574 3230499 DET0135 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_180885.1 132882 D 243164 CDS YP_180886.1 57235028 3230498 133577..135322 1 NC_002936.3 identified by similarity to OMNI:NTL01BH3159; match to protein family HMM TIGR00229; sensory box sensor histidine kinase 135322 3230498 DET0136 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_180886.1 133577 D 243164 CDS YP_180887.1 57235021 3230491 135505..135939 1 NC_002936.3 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 135939 mgsA 3230491 mgsA Dehalococcoides ethenogenes 195 methylglyoxal synthase YP_180887.1 135505 D 243164 CDS YP_180888.1 57235020 3230490 136010..136846 1 NC_002936.3 identified by match to protein family HMM TIGR02136; phosphate ABC transporter, phosphate-binding protein 136846 3230490 DET0138 Dehalococcoides ethenogenes 195 phosphate ABC transporter, phosphate-binding protein YP_180888.1 136010 D 243164 CDS YP_180889.1 57235019 3230489 136921..137781 1 NC_002936.3 identified by similarity to GP:4530448; phosphate ABC transporter permease 137781 3230489 DET0139 Dehalococcoides ethenogenes 195 phosphate ABC transporter permease YP_180889.1 136921 D 243164 CDS YP_180890.1 57235018 3230488 137774..138625 1 NC_002936.3 phosphate ABC transporter permease 138625 3230488 DET0140 Dehalococcoides ethenogenes 195 phosphate ABC transporter permease YP_180890.1 137774 D 243164 CDS YP_180891.1 57235017 3230487 138626..139381 1 NC_002936.3 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 139381 pstB 3230487 pstB Dehalococcoides ethenogenes 195 phosphate ABC transporter ATP-binding protein YP_180891.1 138626 D 243164 CDS YP_180892.1 57235016 3230486 139394..140059 1 NC_002936.3 identified by similarity to SP:P07656; match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU 140059 phoU 3230486 phoU Dehalococcoides ethenogenes 195 phosphate transport system regulatory protein PhoU YP_180892.1 139394 D 243164 CDS YP_180893.1 57235015 3230485 140040..140480 1 NC_002936.3 identified by similarity to SP:P30330; arsenate reductase 140480 arsC 3230485 arsC Dehalococcoides ethenogenes 195 arsenate reductase YP_180893.1 140040 D 243164 CDS YP_180894.1 57235006 3230476 complement(140534..141088) 1 NC_002936.3 identified by similarity to OMNI:PSPTO1011; acetyltransferase 141088 3230476 DET0144 Dehalococcoides ethenogenes 195 acetyltransferase YP_180894.1 140534 R 243164 CDS YP_180895.1 57235005 3230475 141401..141868 1 NC_002936.3 identified by similarity to GP:2865515; [Fe] hydrogenase, HymA subunit 141868 3230475 DET0145 Dehalococcoides ethenogenes 195 [Fe] hydrogenase, HymA subunit YP_180895.1 141401 D 243164 CDS YP_180896.1 57235004 3230474 141870..143123 1 NC_002936.3 identified by similarity to GP:5650749; match to protein family HMM PF01512; [Fe] hydrogenase, HymB subunit 143123 3230474 DET0146 Dehalococcoides ethenogenes 195 [Fe] hydrogenase, HymB subunit YP_180896.1 141870 D 243164 CDS YP_180897.1 57235003 3230473 143111..144832 1 NC_002936.3 identified by similarity to GP:14250935; match to protein family HMM PF02256; [Fe] hydrogenase, large subunit HymC 144832 3230473 DET0147 Dehalococcoides ethenogenes 195 [Fe] hydrogenase, large subunit HymC YP_180897.1 143111 D 243164 CDS YP_180898.1 57235002 3230472 144873..145376 1 NC_002936.3 identified by similarity to GP:14250936; [Fe] hydrogenase, HymD subunit 145376 3230472 DET0148 Dehalococcoides ethenogenes 195 [Fe] hydrogenase, HymD subunit YP_180898.1 144873 D 243164 CDS YP_180899.1 57235001 3230471 complement(145482..146315) 1 NC_002936.3 identified by similarity to OMNI:MT0192; alpha/beta fold family hydrolase 146315 3230471 DET0149 Dehalococcoides ethenogenes 195 alpha/beta fold family hydrolase YP_180899.1 145482 R 243164 CDS YP_180900.1 57235000 3230470 complement(146322..146582) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM2721; hypothetical protein 146582 3230470 DET0150 Dehalococcoides ethenogenes 195 hypothetical protein YP_180900.1 146322 R 243164 CDS YP_180901.1 57234999 3230469 complement(146722..147444) 1 NC_002936.3 identified by match to protein family HMM PF01863; hypothetical protein 147444 3230469 DET0151 Dehalococcoides ethenogenes 195 hypothetical protein YP_180901.1 146722 R 243164 CDS YP_180902.1 57234991 3230461 complement(147441..148334) 1 NC_002936.3 hypothetical protein 148334 3230461 DET0152 Dehalococcoides ethenogenes 195 hypothetical protein YP_180902.1 147441 R 243164 CDS YP_180903.1 57234990 3230460 148436..148987 1 NC_002936.3 identified by similarity to GP:560723; hypothetical protein 148987 3230460 DET0153 Dehalococcoides ethenogenes 195 hypothetical protein YP_180903.1 148436 D 243164 CDS YP_180904.1 57234989 3230459 complement(149100..150632) 1 NC_002936.3 identified by match to protein family HMM PF00239; match to protein family HMM PF07508; resolvase domain-containing protein 150632 3230459 DET0155 Dehalococcoides ethenogenes 195 resolvase domain-containing protein YP_180904.1 149100 R 243164 CDS YP_180905.1 57234988 3230458 complement(150830..151645) 1 NC_002936.3 hypothetical protein 151645 3230458 DET0156 Dehalococcoides ethenogenes 195 hypothetical protein YP_180905.1 150830 R 243164 CDS YP_180906.1 57234987 3230457 151916..152620 1 NC_002936.3 identified by match to protein family HMM PF00589; phage integrase site specific recombinase 152620 3230457 DET0157 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_180906.1 151916 D 243164 CDS YP_180907.1 57234986 3230456 complement(152967..153140) 1 NC_002936.3 hypothetical protein 153140 3230456 DET0158 Dehalococcoides ethenogenes 195 hypothetical protein YP_180907.1 152967 R 243164 CDS YP_180908.1 57234985 3230455 153584..154099 1 NC_002936.3 hypothetical protein 154099 3230455 DET0159 Dehalococcoides ethenogenes 195 hypothetical protein YP_180908.1 153584 D 243164 CDS YP_180909.1 57234984 3230454 154245..155522 1 NC_002936.3 DNA polymerase domain-containing protein 155522 3230454 DET0160 Dehalococcoides ethenogenes 195 DNA polymerase domain-containing protein YP_180909.1 154245 D 243164 CDS YP_180910.1 57234983 3230453 156341..156820 1 NC_002936.3 identified by similarity to GP:27360617; hypothetical protein 156820 3230453 DET0161 Dehalococcoides ethenogenes 195 hypothetical protein YP_180910.1 156341 D 243164 CDS YP_180911.1 57235095 3230566 159312..159542 1 NC_002936.3 reductive dehalogenase anchoring protein 159542 3230566 DET0163 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_180911.1 159312 D 243164 CDS YP_180912.1 57235094 3230565 159517..159852 1 NC_002936.3 hypothetical protein 159852 3230565 DET0164 Dehalococcoides ethenogenes 195 hypothetical protein YP_180912.1 159517 D 243164 CDS YP_180913.1 57234973 3230442 159891..160157 1 NC_002936.3 identified by similarity to SP:P24580; ISDet2, transposase orfA 160157 3230442 DET0165 Dehalococcoides ethenogenes 195 ISDet2, transposase orfA YP_180913.1 159891 D 243164 CDS YP_180914.1 57234972 3230441 160181..161005 1 NC_002936.3 identified by similarity to GP:2645861; match to protein family HMM PF00665; ISDet2, transposase orfB 161005 3230441 DET0166 Dehalococcoides ethenogenes 195 ISDet2, transposase orfB YP_180914.1 160181 D 243164 CDS YP_180915.1 57235104 3230576 complement(161375..162187) 1 NC_002936.3 identified by similarity to OMNI:NTL02SC5407; hypothetical protein 162187 3230576 DET0167 Dehalococcoides ethenogenes 195 hypothetical protein YP_180915.1 161375 R 243164 CDS YP_180916.1 57235088 3230559 complement(162819..163640) 1 NC_002936.3 hypothetical protein 163640 3230559 DET0168 Dehalococcoides ethenogenes 195 hypothetical protein YP_180916.1 162819 R 243164 CDS YP_180917.1 57235105 3230577 complement(163656..164207) 1 NC_002936.3 identified by similarity to SP:Q45585; RNA polymerase sigma factor SigW 164207 3230577 DET0169 Dehalococcoides ethenogenes 195 RNA polymerase sigma factor SigW YP_180917.1 163656 R 243164 CDS YP_180918.1 57235087 3230558 complement(165258..165956) 1 NC_002936.3 DNA-binding response regulator 165956 3230558 DET0170 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_180918.1 165258 R 243164 CDS YP_180919.1 57235086 3230557 complement(165964..167475) 1 NC_002936.3 identified by match to protein family HMM TIGR00229; sensory box sensor histidine kinase 167475 3230557 DET0171 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_180919.1 165964 R 243164 CDS YP_180920.1 57235085 3230556 complement(167587..167838) 1 NC_002936.3 hypothetical protein 167838 3230556 DET0172 Dehalococcoides ethenogenes 195 hypothetical protein YP_180920.1 167587 R 243164 CDS YP_180921.1 57235084 3230555 167859..169391 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 169391 3230555 DET0173 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_180921.1 167859 D 243164 CDS YP_180922.1 57235083 3230554 169416..169616 1 NC_002936.3 lipoprotein 169616 3230554 DET0174 Dehalococcoides ethenogenes 195 lipoprotein YP_180922.1 169416 D 243164 CDS YP_180923.1 57235082 3230553 169666..169938 1 NC_002936.3 identified by similarity to GP:27462922; reductive dehalogenase anchoring protein 169938 3230553 DET0175 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_180923.1 169666 D 243164 CDS YP_180924.1 57235081 3230552 169953..170072 1 NC_002936.3 hypothetical protein 170072 3230552 DET0176 Dehalococcoides ethenogenes 195 hypothetical protein YP_180924.1 169953 D 243164 CDS YP_180925.1 57235073 3230544 complement(170109..170789) 1 NC_002936.3 DNA-binding response regulator 170789 3230544 DET0177 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_180925.1 170109 R 243164 CDS YP_180926.1 57235072 3230543 complement(170770..172560) 1 NC_002936.3 identified by similarity to SP:P35164; sensor histidine kinase 172560 3230543 DET0178 Dehalococcoides ethenogenes 195 sensor histidine kinase YP_180926.1 170770 R 243164 CDS YP_180927.1 57235071 3230542 complement(172550..173143) 1 NC_002936.3 hypothetical protein 173143 3230542 DET0179 Dehalococcoides ethenogenes 195 hypothetical protein YP_180927.1 172550 R 243164 CDS YP_180928.1 57235070 3230541 173382..174749 1 NC_002936.3 identified by similarity to GP:3002555; similarity to GP:5531941; match to protein family HMM TIGR01409; reductive dehalogenase 174749 3230541 DET0180 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_180928.1 173382 D 243164 CDS YP_180929.1 57235069 3230540 174799..175086 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 175086 3230540 DET0181 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_180929.1 174799 D 243164 CDS YP_180930.1 57235068 3230539 complement(175181..175342) 1 NC_002936.3 hypothetical protein 175342 3230539 DET0182 Dehalococcoides ethenogenes 195 hypothetical protein YP_180930.1 175181 R 243164 CDS YP_180931.1 57235067 3230538 175537..177219 1 NC_002936.3 identified by similarity to SP:P25888; DEAD/DEAH box helicase 177219 3230538 DET0183 Dehalococcoides ethenogenes 195 DEAD/DEAH box helicase YP_180931.1 175537 D 243164 CDS YP_180932.1 57235066 3230537 177388..178353 1 NC_002936.3 TerC family membrane protein 178353 3230537 DET0184 Dehalococcoides ethenogenes 195 TerC family membrane protein YP_180932.1 177388 D 243164 CDS YP_180933.1 57235059 3230529 complement(178514..179362) 1 NC_002936.3 formate dehydrogenase accessory protein FdhE 179362 3230529 DET0185 Dehalococcoides ethenogenes 195 formate dehydrogenase accessory protein FdhE YP_180933.1 178514 R 243164 CDS YP_180934.1 57235058 3230528 complement(179363..180574) 1 NC_002936.3 formate dehydrogenase, membrane subunit 180574 3230528 DET0186 Dehalococcoides ethenogenes 195 formate dehydrogenase, membrane subunit YP_180934.1 179363 R 243164 CDS YP_180935.1 57235057 3230527 complement(180662..183643) 1 NC_002936.3 identified by match to protein family HMM TIGR01409; match to protein family HMM TIGR01553; formate dehydrogenase, alpha subunit 183643 3230527 DET0187 Dehalococcoides ethenogenes 195 formate dehydrogenase, alpha subunit YP_180935.1 180662 R 243164 CDS YP_180936.1 57235056 3230526 complement(183782..183889) 1 NC_002936.3 hypothetical protein 183889 3230526 DET0188 Dehalococcoides ethenogenes 195 hypothetical protein YP_180936.1 183782 R 243164 CDS YP_180937.1 57235055 3230525 184012..184590 1 NC_002936.3 identified by match to protein family HMM TIGR00095; methyltransferase 184590 3230525 DET0189 Dehalococcoides ethenogenes 195 methyltransferase YP_180937.1 184012 D 243164 CDS YP_180938.1 57235054 3230524 184562..185041 1 NC_002936.3 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 185041 coaD 3230524 coaD Dehalococcoides ethenogenes 195 phosphopantetheine adenylyltransferase YP_180938.1 184562 D 243164 CDS YP_180939.1 57235053 3230523 185130..185384 1 NC_002936.3 iron-sulfur cluster-binding protein 185384 3230523 DET0191 Dehalococcoides ethenogenes 195 iron-sulfur cluster-binding protein YP_180939.1 185130 D 243164 CDS YP_180940.1 57235044 3230514 complement(185493..185981) 1 NC_002936.3 cvpA family protein 185981 3230514 DET0192 Dehalococcoides ethenogenes 195 cvpA family protein YP_180940.1 185493 R 243164 CDS YP_180941.1 57235043 3230513 complement(186078..186881) 1 NC_002936.3 identified by match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase 186881 proC 3230513 proC Dehalococcoides ethenogenes 195 pyrroline-5-carboxylate reductase YP_180941.1 186078 R 243164 CDS YP_180942.1 57235042 3230512 complement(186883..189324) 1 NC_002936.3 identified by similarity to SP:P36430; leucyl-tRNA synthetase 189324 leuS 3230512 leuS Dehalococcoides ethenogenes 195 leucyl-tRNA synthetase YP_180942.1 186883 R 243164 CDS YP_180943.1 57235041 3230511 189504..190811 1 NC_002936.3 hypothetical protein 190811 3230511 DET0195 Dehalococcoides ethenogenes 195 hypothetical protein YP_180943.1 189504 D 243164 CDS YP_180944.1 57235040 3230510 complement(190794..190886) 1 NC_002936.3 hypothetical protein 190886 3230510 DET0196 Dehalococcoides ethenogenes 195 hypothetical protein YP_180944.1 190794 R 243164 CDS YP_180945.1 57235039 3230509 191008..191316 1 NC_002936.3 identified by similarity to OMNI:NTL01MT00097; hypothetical protein 191316 3230509 DET0197 Dehalococcoides ethenogenes 195 hypothetical protein YP_180945.1 191008 D 243164 CDS YP_180946.1 57235038 3230508 191505..191780 1 NC_002936.3 identified by similarity to SP:P23171; glutaredoxin family protein 191780 3230508 DET0198 Dehalococcoides ethenogenes 195 glutaredoxin family protein YP_180946.1 191505 D 243164 CDS YP_180947.1 57235037 3230507 191777..192283 1 NC_002936.3 identified by similarity to SP:P51386; ferredoxin-thioredoxin reductase, catalytic subunit, /rubredoxin 192283 3230507 DET0199 Dehalococcoides ethenogenes 195 ferredoxin-thioredoxin reductase, catalytic subunit, /rubredoxin YP_180947.1 191777 D 243164 CDS YP_180948.1 57235027 3230497 192371..193282 1 NC_002936.3 identified by similarity to OMNI:NTL01MM1194; hypothetical protein 193282 3230497 DET0200 Dehalococcoides ethenogenes 195 hypothetical protein YP_180948.1 192371 D 243164 CDS YP_180949.1 57235026 3230496 complement(193284..194462) 1 NC_002936.3 identified by similarity to SP:P71243; glycosyl hydrolase domain-containing protein 194462 3230496 DET0201 Dehalococcoides ethenogenes 195 glycosyl hydrolase domain-containing protein YP_180949.1 193284 R 243164 CDS YP_180950.1 57235025 3230495 194508..195740 1 NC_002936.3 identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; histidinol-phosphate phosphatase/glycosyl transferase, group 2 family protein 195740 3230495 DET0202 Dehalococcoides ethenogenes 195 histidinol-phosphate phosphatase/glycosyl transferase, group 2 family protein YP_180950.1 194508 D 243164 CDS YP_180951.1 57235024 3230494 195733..196728 1 NC_002936.3 glycosyl transferase, group 2 family protein 196728 3230494 DET0203 Dehalococcoides ethenogenes 195 glycosyl transferase, group 2 family protein YP_180951.1 195733 D 243164 CDS YP_180952.1 57235023 3230493 196721..197659 1 NC_002936.3 NAD-dependent epimerase/dehydratase 197659 3230493 DET0204 Dehalococcoides ethenogenes 195 NAD-dependent epimerase/dehydratase YP_180952.1 196721 D 243164 CDS YP_180953.1 57235022 3230492 197662..198372 1 NC_002936.3 identified by similarity to GP:13491145; D-glycero-D-manno-heptose 1-phosphate guanosyltransferase 198372 3230492 DET0205 Dehalococcoides ethenogenes 195 D-glycero-D-manno-heptose 1-phosphate guanosyltransferase YP_180953.1 197662 D 243164 CDS YP_180954.1 57235014 3230484 198369..199346 1 NC_002936.3 identified by similarity to GP:13491143; D-glycero-D-manno-heptose 7-phosphate kinase 199346 3230484 DET0206 Dehalococcoides ethenogenes 195 D-glycero-D-manno-heptose 7-phosphate kinase YP_180954.1 198369 D 243164 CDS YP_180955.1 57235013 3230483 199374..200024 1 NC_002936.3 identified by similarity to SP:Q9AGY7; phosphoheptose isomerase 200024 gmhA 3230483 gmhA Dehalococcoides ethenogenes 195 phosphoheptose isomerase YP_180955.1 199374 D 243164 CDS YP_180956.1 57235012 3230482 200051..200962 1 NC_002936.3 glycosyl transferase, group 2 family protein 200962 3230482 DET0208 Dehalococcoides ethenogenes 195 glycosyl transferase, group 2 family protein YP_180956.1 200051 D 243164 CDS YP_180957.1 57235011 3230481 200959..202578 1 NC_002936.3 hypothetical protein 202578 3230481 DET0209 Dehalococcoides ethenogenes 195 hypothetical protein YP_180957.1 200959 D 243164 CDS YP_180958.1 57235010 3230480 202664..203434 1 NC_002936.3 hypothetical protein 203434 3230480 DET0210 Dehalococcoides ethenogenes 195 hypothetical protein YP_180958.1 202664 D 243164 CDS YP_180959.1 57235009 3230479 203434..204648 1 NC_002936.3 glycosyl transferase, group 1 family protein 204648 3230479 DET0211 Dehalococcoides ethenogenes 195 glycosyl transferase, group 1 family protein YP_180959.1 203434 D 243164 CDS YP_180960.1 57235008 3230478 204645..205340 1 NC_002936.3 identified by similarity to OMNI:SO3266; hypothetical protein 205340 3230478 DET0212 Dehalococcoides ethenogenes 195 hypothetical protein YP_180960.1 204645 D 243164 CDS YP_180961.1 57235007 3230477 205327..206622 1 NC_002936.3 identified by similarity to OMNI:NTL01MT00337; hypothetical protein 206622 3230477 DET0213 Dehalococcoides ethenogenes 195 hypothetical protein YP_180961.1 205327 D 243164 CDS YP_180962.1 57234998 3230468 complement(206594..207880) 1 NC_002936.3 identified by similarity to SP:P19499; match to protein family HMM PF04422; iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit 207880 3230468 DET0214 Dehalococcoides ethenogenes 195 iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit YP_180962.1 206594 R 243164 CDS YP_180963.1 57234997 3230467 complement(207873..209195) 1 NC_002936.3 polysaccharide biosynthesis protein 209195 3230467 DET0215 Dehalococcoides ethenogenes 195 polysaccharide biosynthesis protein YP_180963.1 207873 R 243164 CDS YP_180964.1 57234996 3230466 209328..210161 1 NC_002936.3 identified by similarity to OMNI:DRA0063; match to protein family HMM PF02585; hypothetical protein 210161 3230466 DET0216 Dehalococcoides ethenogenes 195 hypothetical protein YP_180964.1 209328 D 243164 CDS YP_180965.1 57234995 3230465 210340..211314 1 NC_002936.3 identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 211314 3230465 DET0217 Dehalococcoides ethenogenes 195 aldo/keto reductase oxidoreductase YP_180965.1 210340 D 243164 CDS YP_180966.1 57234994 3230464 complement(211311..211664) 1 NC_002936.3 identified by match to protein family HMM PF02001; DNA-binding protein 211664 3230464 DET0218 Dehalococcoides ethenogenes 195 DNA-binding protein YP_180966.1 211311 R 243164 CDS YP_180967.1 57234993 3230463 211817..212311 1 NC_002936.3 identified by match to protein family HMM PF03130; HEAT repeat-containing PBS lyase 212311 3230463 DET0219 Dehalococcoides ethenogenes 195 HEAT repeat-containing PBS lyase YP_180967.1 211817 D 243164 CDS YP_180968.1 57234992 3230462 212513..212605 1 NC_002936.3 hypothetical protein 212605 3230462 DET0220 Dehalococcoides ethenogenes 195 hypothetical protein YP_180968.1 212513 D 243164 CDS YP_180969.1 57234982 3230452 212825..214951 1 NC_002936.3 identified by similarity to GP:5410603; match to protein family HMM TIGR00238; GNAT family acetyltransferase 214951 3230452 DET0221 Dehalococcoides ethenogenes 195 GNAT family acetyltransferase YP_180969.1 212825 D 243164 CDS YP_180970.1 57234981 3230451 complement(215032..216312) 1 NC_002936.3 identified by match to protein family HMM PF00079; serine protease inhibitor family protein 216312 3230451 DET0222 Dehalococcoides ethenogenes 195 serine protease inhibitor family protein YP_180970.1 215032 R 243164 CDS YP_180971.1 57234980 3230450 216499..217086 1 NC_002936.3 hemolysin 217086 3230450 DET0223 Dehalococcoides ethenogenes 195 hemolysin YP_180971.1 216499 D 243164 CDS YP_180972.1 57234979 3230449 complement(217083..219074) 1 NC_002936.3 identified by similarity to SP:P45535; ABC transporter ATP-binding protein 219074 3230449 DET0224 Dehalococcoides ethenogenes 195 ABC transporter ATP-binding protein YP_180972.1 217083 R 243164 CDS YP_180973.1 57234978 3230448 complement(219207..220073) 1 NC_002936.3 lipoprotein 220073 3230448 DET0225 Dehalococcoides ethenogenes 195 lipoprotein YP_180973.1 219207 R 243164 CDS YP_180974.1 57234977 3230447 complement(220167..221306) 1 NC_002936.3 identified by similarity to OMNI:NTL01CA3526; match to protein family HMM PF03486; hypothetical protein 221306 3230447 DET0226 Dehalococcoides ethenogenes 195 hypothetical protein YP_180974.1 220167 R 243164 CDS YP_180975.1 57234976 3230446 221293..221490 1 NC_002936.3 hypothetical protein 221490 3230446 DET0227 Dehalococcoides ethenogenes 195 hypothetical protein YP_180975.1 221293 D 243164 CDS YP_180976.1 57235091 3230562 complement(221528..221869) 1 NC_002936.3 hypothetical protein 221869 3230562 DET0228 Dehalococcoides ethenogenes 195 hypothetical protein YP_180976.1 221528 R 243164 CDS YP_180977.1 57235090 3230561 complement(221882..222157) 1 NC_002936.3 hypothetical protein 222157 3230561 DET0229 Dehalococcoides ethenogenes 195 hypothetical protein YP_180977.1 221882 R 243164 CDS YP_180978.1 57234975 3230445 complement(222217..222540) 1 NC_002936.3 identified by similarity to OMNI:NTL02LI0782; match to protein family HMM PF05154; TM2 domain-containing protein 222540 3230445 DET0230 Dehalococcoides ethenogenes 195 TM2 domain-containing protein YP_180978.1 222217 R 243164 CDS YP_180979.1 57234974 3230444 complement(222594..222689) 1 NC_002936.3 hypothetical protein 222689 3230444 DET0231 Dehalococcoides ethenogenes 195 hypothetical protein YP_180979.1 222594 R 243164 CDS YP_180980.1 57234966 3230435 complement(222756..223439) 1 NC_002936.3 DNA-binding response regulator 223439 3230435 DET0232 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_180980.1 222756 R 243164 CDS YP_180981.1 57234965 3230434 complement(223420..225243) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA3318; match to protein family HMM TIGR00229; sensory box sensor histidine kinase 225243 3230434 DET0233 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_180981.1 223420 R 243164 CDS YP_180982.1 57234964 3230433 complement(225245..225847) 1 NC_002936.3 hypothetical protein 225847 3230433 DET0234 Dehalococcoides ethenogenes 195 hypothetical protein YP_180982.1 225245 R 243164 CDS YP_180983.1 57234963 3230432 226290..227762 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 227762 3230432 DET0235 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_180983.1 226290 D 243164 CDS YP_180984.1 57234962 3230431 227801..228079 1 NC_002936.3 identified by similarity to GP:27462922; reductive dehalogenase anchoring protein 228079 3230431 DET0236 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_180984.1 227801 D 243164 CDS YP_180985.1 57234961 3230430 228256..229476 1 NC_002936.3 identified by similarity to GP:7710206; transcriptional regulator 229476 3230430 DET0237 Dehalococcoides ethenogenes 195 transcriptional regulator YP_180985.1 228256 D 243164 CDS YP_180986.1 57234960 3230429 229609..230361 1 NC_002936.3 identified by similarity to OMNI:NTL03CP1044; match to protein family HMM TIGR00290; hypothetical protein 230361 3230429 DET0238 Dehalococcoides ethenogenes 195 hypothetical protein YP_180986.1 229609 D 243164 CDS YP_180987.1 57234959 3230428 230439..231110 1 NC_002936.3 radical SAM domain-containing protein 231110 3230428 DET0239 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_180987.1 230439 D 243164 CDS YP_180988.1 57234949 3230418 231115..231837 1 NC_002936.3 tetrapyrrole methylase 231837 3230418 DET0240 Dehalococcoides ethenogenes 195 tetrapyrrole methylase YP_180988.1 231115 D 243164 CDS YP_180989.1 57234948 3230417 231907..232677 1 NC_002936.3 radical SAM domain-containing protein 232677 3230417 DET0241 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_180989.1 231907 D 243164 CDS YP_180990.1 57234947 3230416 232708..233487 1 NC_002936.3 hypothetical protein 233487 3230416 DET0242 Dehalococcoides ethenogenes 195 hypothetical protein YP_180990.1 232708 D 243164 CDS YP_180991.1 57234946 3230415 233493..234233 1 NC_002936.3 radical SAM domain-containing protein 234233 3230415 DET0243 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_180991.1 233493 D 243164 CDS YP_180992.1 57234945 3230414 234242..235999 1 NC_002936.3 identified by similarity to OMNI:TM0118; match to protein family HMM PF00317; match to protein family HMM PF02867; ribonucleotide reductase 235999 nrd-1 3230414 nrd-1 Dehalococcoides ethenogenes 195 ribonucleotide reductase YP_180992.1 234242 D 243164 CDS YP_180993.1 57234944 3230413 235992..236531 1 NC_002936.3 identified by similarity to SP:P13040; cob(I)alamin adenosyltransferase 236531 cobA-1 3230413 cobA-1 Dehalococcoides ethenogenes 195 cob(I)alamin adenosyltransferase YP_180993.1 235992 D 243164 CDS YP_180994.1 57234943 3230412 236546..237502 1 NC_002936.3 identified by match to protein family HMM TIGR00380; cobalamin biosynthesis protein CobD 237502 cobD-1 3230412 cobD-1 Dehalococcoides ethenogenes 195 cobalamin biosynthesis protein CobD YP_180994.1 236546 D 243164 CDS YP_180995.1 57234942 3230411 237518..237778 1 NC_002936.3 identified by similarity to OMNI:CT0027; hypothetical protein 237778 3230411 DET0247 Dehalococcoides ethenogenes 195 hypothetical protein YP_180995.1 237518 D 243164 CDS YP_180996.1 57234971 3230440 237790..238941 1 NC_002936.3 identified by similarity to SP:O54055; cysteine desulfurase 238941 3230440 DET0248 Dehalococcoides ethenogenes 195 cysteine desulfurase YP_180996.1 237790 D 243164 CDS YP_180997.1 57234970 3230439 238955..239761 1 NC_002936.3 identified by similarity to OMNI:MJ1613; hypothetical protein 239761 3230439 DET0249 Dehalococcoides ethenogenes 195 hypothetical protein YP_180997.1 238955 D 243164 CDS YP_180998.1 57234969 3230438 239758..240828 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0342; iron ABC transporter, periplasmic iron-binding protein 240828 3230438 DET0250 Dehalococcoides ethenogenes 195 iron ABC transporter, periplasmic iron-binding protein YP_180998.1 239758 D 243164 CDS YP_180999.1 57234968 3230437 complement(240825..241478) 1 NC_002936.3 identified by similarity to SP:P31080; transcriptional repressor LexA 241478 3230437 DET0251 Dehalococcoides ethenogenes 195 transcriptional repressor LexA YP_180999.1 240825 R 243164 CDS YP_181000.1 57234967 3230436 241589..241819 1 NC_002936.3 hypothetical protein 241819 3230436 DET0252 Dehalococcoides ethenogenes 195 hypothetical protein YP_181000.1 241589 D 243164 CDS YP_181001.1 57234958 3230427 242312..244918 1 NC_002936.3 identified by similarity to SP:Q08346; DNA primase domain-containing protein 244918 3230427 DET0253 Dehalococcoides ethenogenes 195 DNA primase domain-containing protein YP_181001.1 242312 D 243164 CDS YP_181002.1 57234957 3230426 245244..245879 1 NC_002936.3 resolvase domain-containing protein 245879 3230426 DET0254 Dehalococcoides ethenogenes 195 resolvase domain-containing protein YP_181002.1 245244 D 243164 CDS YP_181003.1 57234956 3230425 complement(245933..246118) 1 NC_002936.3 hypothetical protein 246118 3230425 DET0255 Dehalococcoides ethenogenes 195 hypothetical protein YP_181003.1 245933 R 243164 CDS YP_181004.1 57234955 3230424 246601..247194 1 NC_002936.3 hypothetical protein 247194 3230424 DET0256 Dehalococcoides ethenogenes 195 hypothetical protein YP_181004.1 246601 D 243164 CDS YP_181005.1 57234954 3230423 complement(247482..247718) 1 NC_002936.3 hypothetical protein 247718 3230423 DET0257 Dehalococcoides ethenogenes 195 hypothetical protein YP_181005.1 247482 R 243164 CDS YP_181006.1 57234953 3230422 248008..248277 1 NC_002936.3 hypothetical protein 248277 3230422 DET0258 Dehalococcoides ethenogenes 195 hypothetical protein YP_181006.1 248008 D 243164 CDS YP_181007.1 57234952 3230421 complement(248267..248611) 1 NC_002936.3 hypothetical protein 248611 3230421 DET0259 Dehalococcoides ethenogenes 195 hypothetical protein YP_181007.1 248267 R 243164 CDS YP_181008.1 57234951 3230420 complement(248611..250371) 1 NC_002936.3 hypothetical protein 250371 3230420 DET0260 Dehalococcoides ethenogenes 195 hypothetical protein YP_181008.1 248611 R 243164 CDS YP_181009.1 57234950 3230419 complement(250368..251357) 1 NC_002936.3 hypothetical protein 251357 3230419 DET0261 Dehalococcoides ethenogenes 195 hypothetical protein YP_181009.1 250368 R 243164 CDS YP_181010.1 57234941 3230410 complement(251354..252163) 1 NC_002936.3 hypothetical protein 252163 3230410 DET0262 Dehalococcoides ethenogenes 195 hypothetical protein YP_181010.1 251354 R 243164 CDS YP_181011.1 57234940 3230409 complement(252173..252601) 1 NC_002936.3 hypothetical protein 252601 3230409 DET0263 Dehalococcoides ethenogenes 195 hypothetical protein YP_181011.1 252173 R 243164 CDS YP_181012.1 57234939 3230408 complement(252602..252964) 1 NC_002936.3 hypothetical protein 252964 3230408 DET0264 Dehalococcoides ethenogenes 195 hypothetical protein YP_181012.1 252602 R 243164 CDS YP_181013.1 57234938 3230407 complement(252970..253419) 1 NC_002936.3 hypothetical protein 253419 3230407 DET0265 Dehalococcoides ethenogenes 195 hypothetical protein YP_181013.1 252970 R 243164 CDS YP_181014.1 57234937 3230406 complement(253435..253695) 1 NC_002936.3 hypothetical protein 253695 3230406 DET0266 Dehalococcoides ethenogenes 195 hypothetical protein YP_181014.1 253435 R 243164 CDS YP_181015.1 57234936 3230405 complement(253760..254215) 1 NC_002936.3 hypothetical protein 254215 3230405 DET0267 Dehalococcoides ethenogenes 195 hypothetical protein YP_181015.1 253760 R 243164 CDS YP_181016.1 57234935 3230404 254362..254658 1 NC_002936.3 hypothetical protein 254658 3230404 DET0268 Dehalococcoides ethenogenes 195 hypothetical protein YP_181016.1 254362 D 243164 CDS YP_181017.1 57234934 3230403 254639..256909 1 NC_002936.3 identified by similarity to OMNI:NTL02MA0434; hypothetical protein 256909 3230403 DET0269 Dehalococcoides ethenogenes 195 hypothetical protein YP_181017.1 254639 D 243164 CDS YP_181018.1 57234933 3230402 256911..261284 1 NC_002936.3 identified by match to protein family HMM TIGR01612; Ser/Thr protein phosphatase 261284 3230402 DET0270 Dehalococcoides ethenogenes 195 Ser/Thr protein phosphatase YP_181018.1 256911 D 243164 CDS YP_181019.1 57234924 3230393 261335..261679 1 NC_002936.3 hypothetical protein 261679 3230393 DET0271 Dehalococcoides ethenogenes 195 hypothetical protein YP_181019.1 261335 D 243164 CDS YP_181020.1 57234923 3230392 complement(262087..263046) 1 NC_002936.3 phage integrase site specific recombinase 263046 3230392 DET0272 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_181020.1 262087 R 243164 CDS YP_181021.1 57234922 3230391 complement(263326..263556) 1 NC_002936.3 hypothetical protein 263556 3230391 DET0273 Dehalococcoides ethenogenes 195 hypothetical protein YP_181021.1 263326 R 243164 CDS YP_181022.1 57234921 3230390 263667..264320 1 NC_002936.3 identified by similarity to SP:P31080; transcriptional repressor LexA 264320 3230390 DET0274 Dehalococcoides ethenogenes 195 transcriptional repressor LexA YP_181022.1 263667 D 243164 CDS YP_181023.1 57234920 3230389 264395..264661 1 NC_002936.3 hypothetical protein 264661 3230389 DET0275 Dehalococcoides ethenogenes 195 hypothetical protein YP_181023.1 264395 D 243164 CDS YP_181024.1 57234919 3230388 264670..267276 1 NC_002936.3 identified by similarity to SP:Q08346; DNA primase domain-containing protein 267276 3230388 DET0276 Dehalococcoides ethenogenes 195 DNA primase domain-containing protein YP_181024.1 264670 D 243164 CDS YP_181025.1 57234918 3230387 267602..268237 1 NC_002936.3 resolvase domain-containing protein 268237 3230387 DET0277 Dehalococcoides ethenogenes 195 resolvase domain-containing protein YP_181025.1 267602 D 243164 CDS YP_181026.1 57234917 3230386 complement(268291..268476) 1 NC_002936.3 hypothetical protein 268476 3230386 DET0278 Dehalococcoides ethenogenes 195 hypothetical protein YP_181026.1 268291 R 243164 CDS YP_181027.1 57234916 3230385 268959..269552 1 NC_002936.3 hypothetical protein 269552 3230385 DET0279 Dehalococcoides ethenogenes 195 hypothetical protein YP_181027.1 268959 D 243164 CDS YP_181028.1 57234907 3230376 complement(269840..270076) 1 NC_002936.3 hypothetical protein 270076 3230376 DET0280 Dehalococcoides ethenogenes 195 hypothetical protein YP_181028.1 269840 R 243164 CDS YP_181029.1 57234906 3230375 270366..270635 1 NC_002936.3 hypothetical protein 270635 3230375 DET0281 Dehalococcoides ethenogenes 195 hypothetical protein YP_181029.1 270366 D 243164 CDS YP_181030.1 57234905 3230374 complement(270625..270969) 1 NC_002936.3 identified by similarity to OMNI:NTL03SA2242; hypothetical protein 270969 3230374 DET0282 Dehalococcoides ethenogenes 195 hypothetical protein YP_181030.1 270625 R 243164 CDS YP_181031.1 57234904 3230373 complement(270969..272729) 1 NC_002936.3 hypothetical protein 272729 3230373 DET0283 Dehalococcoides ethenogenes 195 hypothetical protein YP_181031.1 270969 R 243164 CDS YP_181032.1 57234903 3230372 complement(272726..273715) 1 NC_002936.3 hypothetical protein 273715 3230372 DET0284 Dehalococcoides ethenogenes 195 hypothetical protein YP_181032.1 272726 R 243164 CDS YP_181033.1 57234902 3230371 complement(273712..274521) 1 NC_002936.3 hypothetical protein 274521 3230371 DET0285 Dehalococcoides ethenogenes 195 hypothetical protein YP_181033.1 273712 R 243164 CDS YP_181034.1 57234901 3230370 complement(274531..274959) 1 NC_002936.3 hypothetical protein 274959 3230370 DET0286 Dehalococcoides ethenogenes 195 hypothetical protein YP_181034.1 274531 R 243164 CDS YP_181035.1 57234900 3230369 complement(274960..275322) 1 NC_002936.3 hypothetical protein 275322 3230369 DET0287 Dehalococcoides ethenogenes 195 hypothetical protein YP_181035.1 274960 R 243164 CDS YP_181036.1 57234899 3230368 complement(275328..275777) 1 NC_002936.3 hypothetical protein 275777 3230368 DET0288 Dehalococcoides ethenogenes 195 hypothetical protein YP_181036.1 275328 R 243164 CDS YP_181037.1 57234898 3230367 complement(275793..276053) 1 NC_002936.3 hypothetical protein 276053 3230367 DET0289 Dehalococcoides ethenogenes 195 hypothetical protein YP_181037.1 275793 R 243164 CDS YP_181038.1 57234889 3230358 complement(276118..276573) 1 NC_002936.3 hypothetical protein 276573 3230358 DET0290 Dehalococcoides ethenogenes 195 hypothetical protein YP_181038.1 276118 R 243164 CDS YP_181039.1 57234888 3230357 276720..277016 1 NC_002936.3 hypothetical protein 277016 3230357 DET0291 Dehalococcoides ethenogenes 195 hypothetical protein YP_181039.1 276720 D 243164 CDS YP_181040.1 57234887 3230356 276997..279267 1 NC_002936.3 identified by similarity to OMNI:NTL03PA00694; hypothetical protein 279267 3230356 DET0292 Dehalococcoides ethenogenes 195 hypothetical protein YP_181040.1 276997 D 243164 CDS YP_181041.1 57234886 3230355 279269..283642 1 NC_002936.3 identified by match to protein family HMM TIGR01612; Ser/Thr protein phosphatase 283642 3230355 DET0293 Dehalococcoides ethenogenes 195 Ser/Thr protein phosphatase YP_181041.1 279269 D 243164 CDS YP_181042.1 57234885 3230354 283693..284037 1 NC_002936.3 hypothetical protein 284037 3230354 DET0294 Dehalococcoides ethenogenes 195 hypothetical protein YP_181042.1 283693 D 243164 CDS YP_181043.1 57234884 3230353 complement(284445..285404) 1 NC_002936.3 phage integrase site specific recombinase 285404 3230353 DET0295 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_181043.1 284445 R 243164 CDS YP_181044.1 57234883 3230352 285527..286027 1 NC_002936.3 identified by similarity to SP:P21921; similarity to SP:Q10671; match to protein family HMM PF00590; precorrin-6Y C5,15-methyltransferase 286027 3230352 DET0296 Dehalococcoides ethenogenes 195 precorrin-6Y C5,15-methyltransferase YP_181044.1 285527 D 243164 CDS YP_181045.1 57234882 3230351 complement(286081..286500) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM2691; hypothetical protein 286500 3230351 DET0297 Dehalococcoides ethenogenes 195 hypothetical protein YP_181045.1 286081 R 243164 CDS YP_181046.1 57234872 3230341 complement(286682..286849) 1 NC_002936.3 hypothetical protein 286849 3230341 DET0298 Dehalococcoides ethenogenes 195 hypothetical protein YP_181046.1 286682 R 243164 CDS YP_181047.1 57234871 3230340 286986..287729 1 NC_002936.3 identified by match to protein family HMM PF00027; Crp/FNR family transcriptional regulator 287729 3230340 DET0299 Dehalococcoides ethenogenes 195 Crp/FNR family transcriptional regulator YP_181047.1 286986 D 243164 CDS YP_181048.1 57234870 3230339 complement(287810..288487) 1 NC_002936.3 DNA-binding response regulator 288487 3230339 DET0300 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_181048.1 287810 R 243164 CDS YP_181049.1 57234869 3230338 complement(288484..289764) 1 NC_002936.3 identified by match to protein family HMM TIGR00229; sensory box sensor histidine kinase 289764 3230338 DET0301 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_181049.1 288484 R 243164 CDS YP_181050.1 57234868 3230337 290049..291593 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 291593 3230337 DET0302 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_181050.1 290049 D 243164 CDS YP_181051.1 57234867 3230336 291617..291889 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 291889 3230336 DET0303 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_181051.1 291617 D 243164 CDS YP_181052.1 57234866 3230335 complement(291965..292636) 1 NC_002936.3 response regulator 292636 3230335 DET0304 Dehalococcoides ethenogenes 195 response regulator YP_181052.1 291965 R 243164 CDS YP_181053.1 57234865 3230334 complement(292640..293917) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM3099; match to protein family HMM TIGR00229; sensory box sensor histidine kinase 293917 3230334 DET0305 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_181053.1 292640 R 243164 CDS YP_181054.1 57234856 3230325 294215..295732 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 295732 3230325 DET0306 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_181054.1 294215 D 243164 CDS YP_181055.1 57234855 3230324 295765..296040 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 296040 3230324 DET0307 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_181055.1 295765 D 243164 CDS YP_181056.1 57234854 3230323 296108..296713 1 NC_002936.3 identified by similarity to SP:Q58075; hypothetical protein 296713 3230323 DET0308 Dehalococcoides ethenogenes 195 hypothetical protein YP_181056.1 296108 D 243164 CDS YP_181057.1 57234853 3230322 complement(296773..296865) 1 NC_002936.3 hypothetical protein 296865 3230322 DET0309 Dehalococcoides ethenogenes 195 hypothetical protein YP_181057.1 296773 R 243164 CDS YP_181058.1 57234852 3230321 296875..298593 1 NC_002936.3 identified by similarity to GP:7710206; transcriptional regulator 298593 3230321 DET0310 Dehalococcoides ethenogenes 195 transcriptional regulator YP_181058.1 296875 D 243164 CDS YP_181059.1 57234851 3230320 298706..300253 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 300253 3230320 DET0311 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_181059.1 298706 D 243164 CDS YP_181060.1 57234850 3230319 300296..300592 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 300592 3230319 DET0312 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_181060.1 300296 D 243164 CDS YP_181061.1 57234849 3230318 300678..300824 1 NC_002936.3 hypothetical protein 300824 3230318 DET0313 Dehalococcoides ethenogenes 195 hypothetical protein YP_181061.1 300678 D 243164 CDS YP_181062.1 57234841 3230310 300832..301614 1 NC_002936.3 identified by similarity to OMNI:MJ1613; hypothetical protein 301614 3230310 DET0314 Dehalococcoides ethenogenes 195 hypothetical protein YP_181062.1 300832 D 243164 CDS YP_181063.1 57234840 3230309 302102..303706 1 NC_002936.3 identified by similarity to OMNI:NTL02MA3318; match to protein family HMM TIGR00229; sensory box sensor histidine kinase 303706 3230309 DET0315 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_181063.1 302102 D 243164 CDS YP_181064.1 57234839 3230308 303681..304358 1 NC_002936.3 DNA-binding response regulator 304358 3230308 DET0316 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_181064.1 303681 D 243164 CDS YP_181065.1 57234838 3230307 complement(304495..304614) 1 NC_002936.3 hypothetical protein 304614 3230307 DET0317 Dehalococcoides ethenogenes 195 hypothetical protein YP_181065.1 304495 R 243164 CDS YP_181066.1 57234837 3230306 304666..306153 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 306153 3230306 DET0318 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_181066.1 304666 D 243164 CDS YP_181067.1 57234836 3230305 306183..306452 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 306452 3230305 DET0319 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_181067.1 306183 D 243164 CDS YP_181068.1 57234835 3230304 306544..307098 1 NC_002936.3 hypothetical protein 307098 3230304 DET0320 Dehalococcoides ethenogenes 195 hypothetical protein YP_181068.1 306544 D 243164 CDS YP_181069.1 57234834 3230303 307095..307547 1 NC_002936.3 lipoprotein 307547 3230303 DET0321 Dehalococcoides ethenogenes 195 lipoprotein YP_181069.1 307095 D 243164 CDS YP_181070.1 57234826 3230295 complement(307601..307732) 1 NC_002936.3 hypothetical protein 307732 3230295 DET0322 Dehalococcoides ethenogenes 195 hypothetical protein YP_181070.1 307601 R 243164 CDS YP_181071.1 57234825 3230294 complement(307887..308897) 1 NC_002936.3 phage integrase site specific recombinase 308897 3230294 DET0323 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_181071.1 307887 R 243164 CDS YP_181072.1 57234824 3230293 complement(309075..309902) 1 NC_002936.3 identified by match to protein family HMM PF01734; patatin-like phospholipase 309902 3230293 DET0325 Dehalococcoides ethenogenes 195 patatin-like phospholipase YP_181072.1 309075 R 243164 CDS YP_181073.1 57234823 3230292 complement(309959..311551) 1 NC_002936.3 identified by similarity to OMNI:NTL01TE2094; match to protein family HMM PF01935; hypothetical protein 311551 3230292 DET0326 Dehalococcoides ethenogenes 195 hypothetical protein YP_181073.1 309959 R 243164 CDS YP_181074.1 57234932 3230401 complement(311548..312147) 1 NC_002936.3 identified by similarity to OMNI:NTL01SS00170; hypothetical protein 312147 3230401 DET0327 Dehalococcoides ethenogenes 195 hypothetical protein YP_181074.1 311548 R 243164 CDS YP_181075.1 57234931 3230400 complement(312219..313424) 1 NC_002936.3 identified by similarity to OMNI:NTL01NS3859; hypothetical protein 313424 3230400 DET0328 Dehalococcoides ethenogenes 195 hypothetical protein YP_181075.1 312219 R 243164 CDS YP_181076.1 57234930 3230399 313551..314171 1 NC_002936.3 amino acid transporter LysE 314171 3230399 DET0329 Dehalococcoides ethenogenes 195 amino acid transporter LysE YP_181076.1 313551 D 243164 CDS YP_181077.1 57234929 3230398 314201..315226 1 NC_002936.3 identified by match to protein family HMM PF00850; histone deacetylase 315226 3230398 DET0330 Dehalococcoides ethenogenes 195 histone deacetylase YP_181077.1 314201 D 243164 CDS YP_181078.1 57234928 3230397 complement(315200..316135) 1 NC_002936.3 identified by similarity to GP:18378082; match to protein family HMM TIGR01297; cation efflux family protein 316135 3230397 DET0331 Dehalococcoides ethenogenes 195 cation efflux family protein YP_181078.1 315200 R 243164 CDS YP_181079.1 57234927 3230396 complement(316155..317060) 1 NC_002936.3 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 317060 secF 3230396 secF Dehalococcoides ethenogenes 195 preprotein translocase subunit SecF YP_181079.1 316155 R 243164 CDS YP_181080.1 57234926 3230395 complement(317053..318402) 1 NC_002936.3 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 318402 secD 3230395 secD Dehalococcoides ethenogenes 195 preprotein translocase subunit SecD YP_181080.1 317053 R 243164 CDS YP_181081.1 57234925 3230394 complement(318432..319913) 1 NC_002936.3 identified by match to protein family HMM PF01743; polyA polymerase 319913 3230394 DET0334 Dehalococcoides ethenogenes 195 polyA polymerase YP_181081.1 318432 R 243164 CDS YP_181082.1 57234915 3230384 complement(319939..320052) 1 NC_002936.3 hypothetical protein 320052 3230384 DET0335 Dehalococcoides ethenogenes 195 hypothetical protein YP_181082.1 319939 R 243164 CDS YP_181083.1 57234914 3230383 complement(320063..320464) 1 NC_002936.3 DNA-binding protein 320464 3230383 DET0336 Dehalococcoides ethenogenes 195 DNA-binding protein YP_181083.1 320063 R 243164 CDS YP_181084.1 57234913 3230382 complement(320720..323167) 1 NC_002936.3 identified by match to protein family HMM TIGR00595; primosomal protein N' 323167 priA 3230382 priA Dehalococcoides ethenogenes 195 primosomal protein N' YP_181084.1 320720 R 243164 CDS YP_181085.1 57234912 3230381 complement(323189..323599) 1 NC_002936.3 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 323599 rplS 3230381 rplS Dehalococcoides ethenogenes 195 50S ribosomal protein L19 YP_181085.1 323189 R 243164 CDS YP_181086.1 57234911 3230380 complement(323723..324469) 1 NC_002936.3 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 324469 trmD 3230380 trmD Dehalococcoides ethenogenes 195 tRNA (guanine-N(1)-)-methyltransferase YP_181086.1 323723 R 243164 CDS YP_181087.1 57234910 3230379 324652..325080 1 NC_002936.3 identified by similarity to GP:27315315; match to protein family HMM TIGR00242; MraZ 325080 mraZ 3230379 mraZ Dehalococcoides ethenogenes 195 MraZ YP_181087.1 324652 D 243164 CDS YP_181088.1 57234909 3230378 325087..326136 1 NC_002936.3 identified by similarity to SP:Q97H81; match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 326136 mraW 3230378 mraW Dehalococcoides ethenogenes 195 S-adenosyl-methyltransferase MraW YP_181088.1 325087 D 243164 CDS YP_181089.1 57234908 3230377 326206..327432 1 NC_002936.3 identified by similarity to SP:P06137; match to protein family HMM TIGR01174; cell division protein FtsA 327432 ftsA-1 3230377 ftsA-1 Dehalococcoides ethenogenes 195 cell division protein FtsA YP_181089.1 326206 D 243164 CDS YP_181090.1 57234897 3230366 327473..328603 1 NC_002936.3 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 328603 ftsZ-1 3230366 ftsZ-1 Dehalococcoides ethenogenes 195 cell division protein FtsZ YP_181090.1 327473 D 243164 CDS YP_181091.1 57234896 3230365 328749..329276 1 NC_002936.3 identified by similarity to SP:Q8R9H6; match to protein family HMM TIGR00244; transcriptional regulator NrdR 329276 nrdR 3230365 nrdR Dehalococcoides ethenogenes 195 transcriptional regulator NrdR YP_181091.1 328749 D 243164 CDS YP_181092.1 57234895 3230364 329593..331878 1 NC_002936.3 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 331878 nrd-2 3230364 nrd-2 Dehalococcoides ethenogenes 195 ribonucleotide-diphosphate reductase subunit alpha YP_181092.1 329593 D 243164 CDS YP_181093.1 57234894 3230363 331885..331992 1 NC_002936.3 hypothetical protein 331992 3230363 DET0346 Dehalococcoides ethenogenes 195 hypothetical protein YP_181093.1 331885 D 243164 CDS YP_181094.1 57234893 3230362 332109..332693 1 NC_002936.3 identified by similarity to OMNI:NTL02ML6114; hypothetical protein 332693 3230362 DET0347 Dehalococcoides ethenogenes 195 hypothetical protein YP_181094.1 332109 D 243164 CDS YP_181095.1 57234892 3230361 332662..334296 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0848; radical SAM domain-containing protein 334296 3230361 DET0348 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_181095.1 332662 D 243164 CDS YP_181096.1 57234891 3230360 complement(334345..334794) 1 NC_002936.3 identified by similarity to OMNI:TM0690; match to protein family HMM PF02637; GatB/YqeY domain-containing protein 334794 3230360 DET0349 Dehalococcoides ethenogenes 195 GatB/YqeY domain-containing protein YP_181096.1 334345 R 243164 CDS YP_181097.1 57234890 3230359 complement(334797..334991) 1 NC_002936.3 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 334991 rpsU 3230359 rpsU Dehalococcoides ethenogenes 195 30S ribosomal protein S21 YP_181097.1 334797 R 243164 CDS YP_181098.1 57234881 3230350 complement(335166..335396) 1 NC_002936.3 hypothetical protein 335396 3230350 DET0351 Dehalococcoides ethenogenes 195 hypothetical protein YP_181098.1 335166 R 243164 CDS YP_181099.1 57234880 3230349 complement(335508..336938) 1 NC_002936.3 identified by similarity to GB:BAC73118.1; hypothetical protein 336938 3230349 DET0352 Dehalococcoides ethenogenes 195 hypothetical protein YP_181099.1 335508 R 243164 CDS YP_181100.1 57234879 3230348 337146..337487 1 NC_002936.3 hypothetical protein 337487 3230348 DET0353 Dehalococcoides ethenogenes 195 hypothetical protein YP_181100.1 337146 D 243164 CDS YP_181101.1 57234878 3230347 337471..338382 1 NC_002936.3 identified by similarity to GP:29895579; phage domain-containing protein 338382 3230347 DET0354 Dehalococcoides ethenogenes 195 phage domain-containing protein YP_181101.1 337471 D 243164 CDS YP_181102.1 57234877 3230346 338433..339533 1 NC_002936.3 hypothetical protein 339533 3230346 DET0355 Dehalococcoides ethenogenes 195 hypothetical protein YP_181102.1 338433 D 243164 CDS YP_181103.1 57234876 3230345 339545..339757 1 NC_002936.3 hypothetical protein 339757 3230345 DET0356 Dehalococcoides ethenogenes 195 hypothetical protein YP_181103.1 339545 D 243164 CDS YP_181104.1 57234875 3230344 complement(339868..341193) 1 NC_002936.3 hypothetical protein 341193 3230344 DET0357 Dehalococcoides ethenogenes 195 hypothetical protein YP_181104.1 339868 R 243164 CDS YP_181105.1 57234874 3230343 complement(341231..341614) 1 NC_002936.3 hypothetical protein 341614 3230343 DET0358 Dehalococcoides ethenogenes 195 hypothetical protein YP_181105.1 341231 R 243164 CDS YP_181106.1 57234873 3230342 341702..342397 1 NC_002936.3 identified by similarity to OMNI:NTL01CJ00668; hypothetical protein 342397 3230342 DET0359 Dehalococcoides ethenogenes 195 hypothetical protein YP_181106.1 341702 D 243164 CDS YP_181107.1 57234864 3230333 343205..343351 1 NC_002936.3 hypothetical protein 343351 3230333 DET0361 Dehalococcoides ethenogenes 195 hypothetical protein YP_181107.1 343205 D 243164 CDS YP_181108.1 57234863 3230332 complement(343335..344060) 1 NC_002936.3 hypothetical protein 344060 3230332 DET0362 Dehalococcoides ethenogenes 195 hypothetical protein YP_181108.1 343335 R 243164 CDS YP_181109.1 57234862 3230331 344252..344524 1 NC_002936.3 hypothetical protein 344524 3230331 DET0363 Dehalococcoides ethenogenes 195 hypothetical protein YP_181109.1 344252 D 243164 CDS YP_181110.1 57234861 3230330 344622..345755 1 NC_002936.3 identified by similarity to SP:Q44879; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease 345755 3230330 DET0364 Dehalococcoides ethenogenes 195 carboxyl-terminal protease YP_181110.1 344622 D 243164 CDS YP_181111.1 57234860 3230329 345870..346910 1 NC_002936.3 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 346910 pheS 3230329 pheS Dehalococcoides ethenogenes 195 phenylalanyl-tRNA synthetase subunit alpha YP_181111.1 345870 D 243164 CDS YP_181112.1 57234859 3230328 346912..349341 1 NC_002936.3 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 349341 pheT 3230328 pheT Dehalococcoides ethenogenes 195 phenylalanyl-tRNA synthetase subunit beta YP_181112.1 346912 D 243164 CDS YP_181113.1 57234858 3230327 349435..350070 1 NC_002936.3 catalyzes the hydrolysis of pyrophosphate; inorganic pyrophosphatase 350070 ppa 3230327 ppa Dehalococcoides ethenogenes 195 inorganic pyrophosphatase YP_181113.1 349435 D 243164 CDS YP_181114.1 57234857 3230326 complement(350138..351847) 1 NC_002936.3 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 351847 proS 3230326 proS Dehalococcoides ethenogenes 195 prolyl-tRNA synthetase YP_181114.1 350138 R 243164 CDS YP_181115.1 57234848 3230317 complement(351938..352903) 1 NC_002936.3 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 352903 ispG 3230317 ispG Dehalococcoides ethenogenes 195 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_181115.1 351938 R 243164 CDS YP_181116.1 57234847 3230316 complement(353021..354058) 1 NC_002936.3 membrane-associated zinc metalloprotease 354058 3230316 DET0370 Dehalococcoides ethenogenes 195 membrane-associated zinc metalloprotease YP_181116.1 353021 R 243164 CDS YP_181117.1 57234846 3230315 complement(354059..355192) 1 NC_002936.3 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 355192 dxr 3230315 dxr Dehalococcoides ethenogenes 195 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_181117.1 354059 R 243164 CDS YP_181118.1 57234845 3230314 complement(355177..355980) 1 NC_002936.3 identified by similarity to SP:O31752; phosphatidate cytidylyltransferase 355980 cdsA 3230314 cdsA Dehalococcoides ethenogenes 195 phosphatidate cytidylyltransferase YP_181118.1 355177 R 243164 CDS YP_181119.1 57234844 3230313 complement(355984..356694) 1 NC_002936.3 identified by similarity to SP:O82827; match to protein family HMM PF01255; match to protein family HMM TIGR00055; UDP diphosphate synthase 356694 uppS 3230313 uppS Dehalococcoides ethenogenes 195 UDP diphosphate synthase YP_181119.1 355984 R 243164 CDS YP_181120.1 57234843 3230312 complement(356761..357318) 1 NC_002936.3 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 357318 frr 3230312 frr Dehalococcoides ethenogenes 195 ribosome recycling factor YP_181120.1 356761 R 243164 CDS YP_181121.1 57234842 3230311 complement(357320..358045) 1 NC_002936.3 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 358045 pyrH 3230311 pyrH Dehalococcoides ethenogenes 195 uridylate kinase YP_181121.1 357320 R 243164 CDS YP_181122.1 57234833 3230302 complement(358060..358563) 1 NC_002936.3 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 358563 tsf 3230302 tsf Dehalococcoides ethenogenes 195 elongation factor Ts YP_181122.1 358060 R 243164 CDS YP_181123.1 57234832 3230301 complement(358588..359325) 1 NC_002936.3 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 359325 rpsB 3230301 rpsB Dehalococcoides ethenogenes 195 30S ribosomal protein S2 YP_181123.1 358588 R 243164 CDS YP_181124.1 57234831 3230300 complement(359510..360277) 1 NC_002936.3 identified by similarity to SP:O29008; match to protein family HMM TIGR01737; phosphoribosylformylglycinamidine synthase I 360277 purQ 3230300 purQ Dehalococcoides ethenogenes 195 phosphoribosylformylglycinamidine synthase I YP_181124.1 359510 R 243164 CDS YP_181125.1 57234830 3230299 complement(360284..363145) 1 NC_002936.3 identified by similarity to GB:AAA22679.1; match to protein family HMM TIGR01736; phosphoribosylformylglycinamidine synthase II 363145 purL 3230299 purL Dehalococcoides ethenogenes 195 phosphoribosylformylglycinamidine synthase II YP_181125.1 360284 R 243164 CDS YP_181126.1 57234829 3230298 complement(363149..364030) 1 NC_002936.3 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 364030 3230298 DET0380 Dehalococcoides ethenogenes 195 pyridoxal biosynthesis lyase PdxS YP_181126.1 363149 R 243164 CDS YP_181127.1 57234828 3230297 364234..364611 1 NC_002936.3 identified by match to protein family HMM PF00355; Rieske family iron-sulfur cluster-binding protein 364611 3230297 DET0381 Dehalococcoides ethenogenes 195 Rieske family iron-sulfur cluster-binding protein YP_181127.1 364234 D 243164 CDS YP_181128.1 57234827 3230296 364790..365560 1 NC_002936.3 hypothetical protein 365560 3230296 DET0383 Dehalococcoides ethenogenes 195 hypothetical protein YP_181128.1 364790 D 243164 CDS YP_181129.1 57234818 3230287 complement(365645..366790) 1 NC_002936.3 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 366790 3230287 DET0384 Dehalococcoides ethenogenes 195 inosine 5-monophosphate dehydrogenase YP_181129.1 365645 R 243164 CDS YP_181130.1 57234817 3230286 366875..367033 1 NC_002936.3 hypothetical protein 367033 3230286 DET0385 Dehalococcoides ethenogenes 195 hypothetical protein YP_181130.1 366875 D 243164 CDS YP_181131.1 57234816 3230285 367041..367865 1 NC_002936.3 identified by similarity to OMNI:NTL01NS4675; match to protein family HMM TIGR00096; tetrapyrrole methylase 367865 3230285 DET0386 Dehalococcoides ethenogenes 195 tetrapyrrole methylase YP_181131.1 367041 D 243164 CDS YP_181132.1 57234815 3230284 367890..368105 1 NC_002936.3 hypothetical protein 368105 3230284 DET0387 Dehalococcoides ethenogenes 195 hypothetical protein YP_181132.1 367890 D 243164 CDS YP_181133.1 57234814 3230283 368114..369775 1 NC_002936.3 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 369775 metG 3230283 metG Dehalococcoides ethenogenes 195 methionyl-tRNA synthetase YP_181133.1 368114 D 243164 CDS YP_181134.1 57234813 3230282 369797..370771 1 NC_002936.3 identified by similarity to SP:P55785; match to protein family HMM PF00348; heptaprenyl diphosphate synthase component II 370771 hepT 3230282 hepT Dehalococcoides ethenogenes 195 heptaprenyl diphosphate synthase component II YP_181134.1 369797 D 243164 CDS YP_181135.1 57234812 3230281 complement(370749..371045) 1 NC_002936.3 hypothetical protein 371045 3230281 DET0390 Dehalococcoides ethenogenes 195 hypothetical protein YP_181135.1 370749 R 243164 CDS YP_181136.1 57234811 3230280 complement(371093..372919) 1 NC_002936.3 identified by similarity to SP:P37476; match to protein family HMM PF06480; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH 372919 ftsH 3230280 ftsH Dehalococcoides ethenogenes 195 ATP-dependent metalloprotease FtsH YP_181136.1 371093 R 243164 CDS YP_181137.1 57234803 3230272 complement(372979..373809) 1 NC_002936.3 AP endonuclease 373809 3230272 DET0392 Dehalococcoides ethenogenes 195 AP endonuclease YP_181137.1 372979 R 243164 CDS YP_181138.1 57234802 3230271 373929..374273 1 NC_002936.3 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap-like protein 374273 3230271 DET0393 Dehalococcoides ethenogenes 195 iojap-like protein YP_181138.1 373929 D 243164 CDS YP_181139.1 57234801 3230270 complement(374274..374702) 1 NC_002936.3 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 374702 ndk 3230270 ndk Dehalococcoides ethenogenes 195 nucleoside diphosphate kinase YP_181139.1 374274 R 243164 CDS YP_181140.1 57234800 3230269 complement(374712..376082) 1 NC_002936.3 identified by match to protein family HMM PF00814; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; match to protein family HMM TIGR02009; glycoprotease/hydrolase, beta-phosphoglucomutase 376082 3230269 DET0395 Dehalococcoides ethenogenes 195 glycoprotease/hydrolase, beta-phosphoglucomutase YP_181140.1 374712 R 243164 CDS YP_181141.1 57234799 3230268 complement(376060..376551) 1 NC_002936.3 identified by similarity to GP:29894046; match to protein family HMM TIGR00150; hypothetical protein 376551 3230268 DET0396 Dehalococcoides ethenogenes 195 hypothetical protein YP_181141.1 376060 R 243164 CDS YP_181142.1 57234798 3230267 complement(376548..377558) 1 NC_002936.3 identified by match to protein family HMM TIGR01379; thiamine-monophosphate kinase 377558 thiL 3230267 thiL Dehalococcoides ethenogenes 195 thiamine-monophosphate kinase YP_181142.1 376548 R 243164 CDS YP_181143.1 57234797 3230266 377850..378626 1 NC_002936.3 identified by similarity to SP:P27851; ubiquinone/menaquinone biosynthesis methlytransferase UbiE 378626 3230266 DET0398 Dehalococcoides ethenogenes 195 ubiquinone/menaquinone biosynthesis methlytransferase UbiE YP_181143.1 377850 D 243164 CDS YP_181144.1 57234789 3230258 378628..379395 1 NC_002936.3 identified by similarity to SP:P27851; ubiquinone/menaquinone biosynthesis methlytransferase UbiE 379395 3230258 DET0399 Dehalococcoides ethenogenes 195 ubiquinone/menaquinone biosynthesis methlytransferase UbiE YP_181144.1 378628 D 243164 CDS YP_181145.1 57234788 3230257 379397..380491 1 NC_002936.3 identified by match to protein family HMM PF01761; 3-dehydroquinate synthase 380491 3230257 DET0400 Dehalococcoides ethenogenes 195 3-dehydroquinate synthase YP_181145.1 379397 D 243164 CDS YP_181146.1 57234787 3230256 380475..381395 1 NC_002936.3 identified by similarity to SP:P32166; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 381395 3230256 DET0401 Dehalococcoides ethenogenes 195 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_181146.1 380475 D 243164 CDS YP_181147.1 57234786 3230255 381395..381997 1 NC_002936.3 UbiE/COQ5 family methlytransferase 381997 3230255 DET0402 Dehalococcoides ethenogenes 195 UbiE/COQ5 family methlytransferase YP_181147.1 381395 D 243164 CDS YP_181148.1 57234785 3230254 382126..382857 1 NC_002936.3 identified by similarity to OMNI:NTL01MK0801; Ser/Thr protein phosphatase 382857 3230254 DET0403 Dehalococcoides ethenogenes 195 Ser/Thr protein phosphatase YP_181148.1 382126 D 243164 CDS YP_181149.1 57234784 3230253 382877..383752 1 NC_002936.3 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 383752 ksgA 3230253 ksgA Dehalococcoides ethenogenes 195 dimethyladenosine transferase YP_181149.1 382877 D 243164 CDS YP_181150.1 57234783 3230252 383746..384600 1 NC_002936.3 identified by match to protein family HMM TIGR00154; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 384600 ispE 3230252 ispE Dehalococcoides ethenogenes 195 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_181150.1 383746 D 243164 CDS YP_181151.1 57234822 3230291 384656..385153 1 NC_002936.3 rubrerythrin/rubredoxin 385153 3230291 DET0406 Dehalococcoides ethenogenes 195 rubrerythrin/rubredoxin YP_181151.1 384656 D 243164 CDS YP_181152.1 57234821 3230290 complement(385230..385469) 1 NC_002936.3 identified by similarity to OMNI:NTL03ST4202; hypothetical protein 385469 3230290 DET0407 Dehalococcoides ethenogenes 195 hypothetical protein YP_181152.1 385230 R 243164 CDS YP_181153.1 57234820 3230289 complement(385554..386363) 1 NC_002936.3 identified by similarity to OMNI:NTL01XC3234; cation channel family protein 386363 3230289 DET0408 Dehalococcoides ethenogenes 195 cation channel family protein YP_181153.1 385554 R 243164 CDS YP_181154.1 57234819 3230288 complement(386350..387606) 1 NC_002936.3 polyA polymerase 387606 3230288 DET0409 Dehalococcoides ethenogenes 195 polyA polymerase YP_181154.1 386350 R 243164 CDS YP_181155.1 57234810 3230279 387687..388604 1 NC_002936.3 identified by similarity to SP:P23703; nodulation ATP-binding protein I 388604 nodI 3230279 nodI Dehalococcoides ethenogenes 195 nodulation ATP-binding protein I YP_181155.1 387687 D 243164 CDS YP_181156.1 57234809 3230278 388601..389368 1 NC_002936.3 identified by similarity to SP:P55475; NodJ 389368 3230278 DET0411 Dehalococcoides ethenogenes 195 NodJ YP_181156.1 388601 D 243164 CDS YP_181157.1 57234808 3230277 389417..389968 1 NC_002936.3 identified by similarity to SP:Q58794; hypothetical protein 389968 3230277 DET0412 Dehalococcoides ethenogenes 195 hypothetical protein YP_181157.1 389417 D 243164 CDS YP_181158.1 57234807 3230276 389965..390438 1 NC_002936.3 identified by similarity to SP:O22000; match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase 390438 3230276 DET0413 Dehalococcoides ethenogenes 195 cytidine/deoxycytidylate deaminase YP_181158.1 389965 D 243164 CDS YP_181159.1 57234806 3230275 390526..391431 1 NC_002936.3 identified by similarity to OMNI:TM0358; match to protein family HMM TIGR00147; hypothetical protein 391431 3230275 DET0414 Dehalococcoides ethenogenes 195 hypothetical protein YP_181159.1 390526 D 243164 CDS YP_181160.1 57234805 3230274 complement(391497..392009) 1 NC_002936.3 catalyzes the formation of UMP from UTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 392009 dut 3230274 dut Dehalococcoides ethenogenes 195 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_181160.1 391497 R 243164 CDS YP_181161.1 57234804 3230273 392224..392511 1 NC_002936.3 identified by similarity to OMNI:NTL01MM2338; similarity to OMNI:NTL03CP2599; hypothetical protein 392511 3230273 DET0416 Dehalococcoides ethenogenes 195 hypothetical protein YP_181161.1 392224 D 243164 CDS YP_181162.1 57234796 3230265 complement(392594..393355) 1 NC_002936.3 identified by similarity to SP:P48243; amino acid ABC transporter, ATP-binding protein 393355 3230265 DET0417 Dehalococcoides ethenogenes 195 amino acid ABC transporter, ATP-binding protein YP_181162.1 392594 R 243164 CDS YP_181163.1 57234795 3230264 complement(393355..394176) 1 NC_002936.3 identified by match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 394176 3230264 DET0418 Dehalococcoides ethenogenes 195 His/Glu/Gln/Arg/opine ABC transporter permease YP_181163.1 393355 R 243164 CDS YP_181164.1 57234794 3230263 complement(394234..395016) 1 NC_002936.3 identified by similarity to SP:P30860; similarity to SP:P39174; amino acid ABC transporter, periplasmic amino acid-binding protein 395016 3230263 DET0419 Dehalococcoides ethenogenes 195 amino acid ABC transporter, periplasmic amino acid-binding protein YP_181164.1 394234 R 243164 CDS YP_181165.1 57234793 3230262 complement(395060..395170) 1 NC_002936.3 hypothetical protein 395170 3230262 DET0420 Dehalococcoides ethenogenes 195 hypothetical protein YP_181165.1 395060 R 243164 CDS YP_181166.1 57234792 3230261 complement(395219..396058) 1 NC_002936.3 identified by similarity to GP:28202560; match to protein family HMM TIGR00762; degV family protein 396058 3230261 DET0421 Dehalococcoides ethenogenes 195 degV family protein YP_181166.1 395219 R 243164 CDS YP_181167.1 57234791 3230260 complement(396513..396632) 1 NC_002936.3 hypothetical protein 396632 3230260 DET0423 Dehalococcoides ethenogenes 195 hypothetical protein YP_181167.1 396513 R 243164 CDS YP_181168.1 57234790 3230259 396762..397712 1 NC_002936.3 identified by match to protein family HMM PF01544; magnesium and cobalt transport protein 397712 3230259 DET0424 Dehalococcoides ethenogenes 195 magnesium and cobalt transport protein YP_181168.1 396762 D 243164 CDS YP_181169.1 57234782 3230251 397734..398393 1 NC_002936.3 identified by match to protein family HMM TIGR00697; hypothetical protein 398393 3230251 DET0425 Dehalococcoides ethenogenes 195 hypothetical protein YP_181169.1 397734 D 243164 CDS YP_181170.1 57234781 3230250 398414..399190 1 NC_002936.3 metallo-beta-lactamase 399190 3230250 DET0426 Dehalococcoides ethenogenes 195 metallo-beta-lactamase YP_181170.1 398414 D 243164 CDS YP_181171.1 57234780 3230249 399337..400875 1 NC_002936.3 identified by match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; carbohydrate kinase 400875 3230249 DET0427 Dehalococcoides ethenogenes 195 carbohydrate kinase YP_181171.1 399337 D 243164 CDS YP_181172.1 57234779 3230248 400891..401667 1 NC_002936.3 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 401667 3230248 DET0428 Dehalococcoides ethenogenes 195 pantothenate kinase YP_181172.1 400891 D 243164 CDS YP_181173.1 57234778 3230247 401769..402950 1 NC_002936.3 identified by match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 402950 coaBC 3230247 coaBC Dehalococcoides ethenogenes 195 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_181173.1 401769 D 243164 CDS YP_181174.1 57234777 3230246 403040..405682 1 NC_002936.3 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 405682 valS 3230246 valS Dehalococcoides ethenogenes 195 valyl-tRNA synthetase YP_181174.1 403040 D 243164 CDS YP_181175.1 57234776 3230245 complement(405679..406752) 1 NC_002936.3 identified by match to protein family HMM TIGR00229; sensory box sensor histidine kinase 406752 3230245 DET0431 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_181175.1 405679 R 243164 CDS YP_181176.1 57234766 3230235 complement(406733..407431) 1 NC_002936.3 identified by similarity to SP:P54662; LuxR family DNA-binding response regulator 407431 3230235 DET0432 Dehalococcoides ethenogenes 195 LuxR family DNA-binding response regulator YP_181176.1 406733 R 243164 CDS YP_181177.1 57234765 3230234 complement(407534..408217) 1 NC_002936.3 hypothetical protein 408217 3230234 DET0433 Dehalococcoides ethenogenes 195 hypothetical protein YP_181177.1 407534 R 243164 CDS YP_181178.1 57234764 3230233 complement(408241..411099) 1 NC_002936.3 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 411099 secA 3230233 secA Dehalococcoides ethenogenes 195 preprotein translocase subunit SecA YP_181178.1 408241 R 243164 CDS YP_181179.1 57234763 3230232 complement(411103..412077) 1 NC_002936.3 identified by similarity to GB:CAA58682.1; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 412077 prs 3230232 prs Dehalococcoides ethenogenes 195 ribose-phosphate pyrophosphokinase YP_181179.1 411103 R 243164 CDS YP_181180.1 57234762 3230231 complement(412092..413339) 1 NC_002936.3 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 413339 glyA 3230231 glyA Dehalococcoides ethenogenes 195 serine hydroxymethyltransferase YP_181180.1 412092 R 243164 CDS YP_181181.1 57234761 3230230 413523..414092 1 NC_002936.3 identified by similarity to GP:21464612; match to protein family HMM TIGR00758; uracil-DNA glycosylase 414092 3230230 DET0437 Dehalococcoides ethenogenes 195 uracil-DNA glycosylase YP_181181.1 413523 D 243164 CDS YP_181182.1 57234760 3230229 414099..415754 1 NC_002936.3 identified by similarity to GP:28203198; match to protein family HMM TIGR00649; metallo-beta-lactamase 415754 3230229 DET0438 Dehalococcoides ethenogenes 195 metallo-beta-lactamase YP_181182.1 414099 D 243164 CDS YP_181183.1 57234759 3230228 415774..418218 1 NC_002936.3 FtsK/SpoIIIE family protein 418218 3230228 DET0439 Dehalococcoides ethenogenes 195 FtsK/SpoIIIE family protein YP_181183.1 415774 D 243164 CDS YP_181184.1 57234750 3230219 complement(418268..418408) 1 NC_002936.3 hypothetical protein 418408 3230219 DET0440 Dehalococcoides ethenogenes 195 hypothetical protein YP_181184.1 418268 R 243164 CDS YP_181185.1 57234749 3230218 complement(418392..420398) 1 NC_002936.3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 420398 uvrB 3230218 uvrB Dehalococcoides ethenogenes 195 excinuclease ABC subunit B YP_181185.1 418392 R 243164 CDS YP_181186.1 57234748 3230217 complement(420444..421028) 1 NC_002936.3 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 421028 ruvA 3230217 ruvA Dehalococcoides ethenogenes 195 Holliday junction DNA helicase RuvA YP_181186.1 420444 R 243164 CDS YP_181187.1 57234747 3230216 complement(421030..421527) 1 NC_002936.3 identified by similarity to SP:P24239; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC 421527 ruvC 3230216 ruvC Dehalococcoides ethenogenes 195 crossover junction endodeoxyribonuclease RuvC YP_181187.1 421030 R 243164 CDS YP_181188.1 57234746 3230215 complement(421531..422286) 1 NC_002936.3 identified by similarity to OMNI:CT1665; match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 422286 3230215 DET0444 Dehalococcoides ethenogenes 195 hypothetical protein YP_181188.1 421531 R 243164 CDS YP_181189.1 57234745 3230214 complement(422402..422761) 1 NC_002936.3 identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556; holo-ACP synthase 422761 acpS 3230214 acpS Dehalococcoides ethenogenes 195 holo-ACP synthase YP_181189.1 422402 R 243164 CDS YP_181190.1 57234744 3230213 complement(422803..423267) 1 NC_002936.3 identified by similarity to GP:2865515; [Fe] hydrogenase, HymA subunit 423267 3230213 DET0446 Dehalococcoides ethenogenes 195 [Fe] hydrogenase, HymA subunit YP_181190.1 422803 R 243164 CDS YP_181191.1 57234734 3230203 423507..425057 1 NC_002936.3 identified by match to protein family HMM PF01039; acyl CoA biotin-dependent carboxyltransferase 425057 3230203 DET0447 Dehalococcoides ethenogenes 195 acyl CoA biotin-dependent carboxyltransferase YP_181191.1 423507 D 243164 CDS YP_181192.1 57234733 3230202 425080..426333 1 NC_002936.3 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 426333 3230202 DET0448 Dehalococcoides ethenogenes 195 3-isopropylmalate dehydratase large subunit YP_181192.1 425080 D 243164 CDS YP_181193.1 57234732 3230201 426333..426836 1 NC_002936.3 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 426836 leuD 3230201 leuD Dehalococcoides ethenogenes 195 3-isopropylmalate dehydratase small subunit YP_181193.1 426333 D 243164 CDS YP_181194.1 57234731 3230200 426851..427930 1 NC_002936.3 identified by similarity to SP:P33197; match to protein family HMM PF00180; isocitrate dehydrogenase 427930 3230200 DET0450 Dehalococcoides ethenogenes 195 isocitrate dehydrogenase YP_181194.1 426851 D 243164 CDS YP_181195.1 57234730 3230199 428007..428930 1 NC_002936.3 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 428930 mdh 3230199 mdh Dehalococcoides ethenogenes 195 malate dehydrogenase YP_181195.1 428007 D 243164 CDS YP_181196.1 57234729 3230198 428953..429324 1 NC_002936.3 hypothetical protein 429324 3230198 DET0452 Dehalococcoides ethenogenes 195 hypothetical protein YP_181196.1 428953 D 243164 CDS YP_181197.1 57234728 3230197 429325..430167 1 NC_002936.3 Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 430167 3230197 DET0453 Dehalococcoides ethenogenes 195 fumarate hydratase YP_181197.1 429325 D 243164 CDS YP_181198.1 57234727 3230196 430164..430730 1 NC_002936.3 identified by similarity to SP:P14407; match to protein family HMM PF05683; match to protein family HMM TIGR00723; fumarate hydratase, beta subunit 430730 3230196 DET0454 Dehalococcoides ethenogenes 195 fumarate hydratase, beta subunit YP_181198.1 430164 D 243164 CDS YP_181199.1 57234719 3230188 430732..431073 1 NC_002936.3 HIT domain-containing protein 431073 3230188 DET0455 Dehalococcoides ethenogenes 195 HIT domain-containing protein YP_181199.1 430732 D 243164 CDS YP_181200.1 57234718 3230187 complement(431070..431600) 1 NC_002936.3 MutT/nudix family protein 431600 3230187 DET0456 Dehalococcoides ethenogenes 195 MutT/nudix family protein YP_181200.1 431070 R 243164 CDS YP_181201.1 57234717 3230186 complement(431619..432095) 1 NC_002936.3 catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 432095 3230186 DET0457 Dehalococcoides ethenogenes 195 acetyltransferase YP_181201.1 431619 R 243164 CDS YP_181202.1 57234716 3230185 complement(432079..432933) 1 NC_002936.3 identified by similarity to GP:27262282; inorganic polyphosphate/ATP-NAD kinase 432933 3230185 DET0458 Dehalococcoides ethenogenes 195 inorganic polyphosphate/ATP-NAD kinase YP_181202.1 432079 R 243164 CDS YP_181203.1 57234715 3230184 complement(433005..433328) 1 NC_002936.3 hypothetical protein 433328 3230184 DET0459 Dehalococcoides ethenogenes 195 hypothetical protein YP_181203.1 433005 R 243164 CDS YP_181204.1 57234714 3230183 complement(433421..434284) 1 NC_002936.3 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 434284 3230183 DET0460 Dehalococcoides ethenogenes 195 prephenate dehydrogenase YP_181204.1 433421 R 243164 CDS YP_181205.1 57234713 3230182 complement(434281..435357) 1 NC_002936.3 chorismate mutase/prephenate dehydratase 435357 tyrA 3230182 tyrA Dehalococcoides ethenogenes 195 chorismate mutase/prephenate dehydratase YP_181205.1 434281 R 243164 CDS YP_181206.1 57234712 3230181 complement(435354..436448) 1 NC_002936.3 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 436448 aroC 3230181 aroC Dehalococcoides ethenogenes 195 chorismate synthase YP_181206.1 435354 R 243164 CDS YP_181207.1 57234703 3230172 complement(436441..437703) 1 NC_002936.3 identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 437703 aroA 3230172 aroA Dehalococcoides ethenogenes 195 3-phosphoshikimate 1-carboxyvinyltransferase YP_181207.1 436441 R 243164 CDS YP_181208.1 57234702 3230171 complement(437684..438214) 1 NC_002936.3 identified by similarity to SP:P24167; shikimate kinase 438214 aroK 3230171 aroK Dehalococcoides ethenogenes 195 shikimate kinase YP_181208.1 437684 R 243164 CDS YP_181209.1 57234701 3230170 complement(438198..439058) 1 NC_002936.3 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 439058 aroE 3230170 aroE Dehalococcoides ethenogenes 195 shikimate 5-dehydrogenase YP_181209.1 438198 R 243164 CDS YP_181210.1 57234700 3230169 complement(439042..439710) 1 NC_002936.3 identified by similarity to SP:P05194; match to protein family HMM PF01487; match to protein family HMM TIGR01093; 3-dehydroquinate dehydratase 439710 aroD 3230169 aroD Dehalococcoides ethenogenes 195 3-dehydroquinate dehydratase YP_181210.1 439042 R 243164 CDS YP_181211.1 57234699 3230168 complement(439707..440786) 1 NC_002936.3 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 440786 aroB 3230168 aroB Dehalococcoides ethenogenes 195 3-dehydroquinate synthase YP_181211.1 439707 R 243164 CDS YP_181212.1 57234698 3230167 complement(440806..441861) 1 NC_002936.3 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 441861 3230167 DET0468 Dehalococcoides ethenogenes 195 3-deoxy-7-phosphoheptulonate synthase YP_181212.1 440806 R 243164 CDS YP_181213.1 57234697 3230166 442098..442214 1 NC_002936.3 hypothetical protein 442214 3230166 DET0469 Dehalococcoides ethenogenes 195 hypothetical protein YP_181213.1 442098 D 243164 CDS YP_181214.1 57234696 3230165 442383..442817 1 NC_002936.3 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 442817 rpsL 3230165 rpsL Dehalococcoides ethenogenes 195 30S ribosomal protein S12 YP_181214.1 442383 D 243164 CDS YP_181215.1 57234689 3230158 442831..443301 1 NC_002936.3 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 443301 rpsG 3230158 rpsG Dehalococcoides ethenogenes 195 30S ribosomal protein S7 YP_181215.1 442831 D 243164 CDS YP_181216.1 57234688 3230157 443357..445438 1 NC_002936.3 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 445438 fusA-1 3230157 fusA-1 Dehalococcoides ethenogenes 195 elongation factor G YP_181216.1 443357 D 243164 CDS YP_181217.1 57234687 3230156 445463..445771 1 NC_002936.3 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 445771 rpsJ 3230156 rpsJ Dehalococcoides ethenogenes 195 30S ribosomal protein S10 YP_181217.1 445463 D 243164 CDS YP_181218.1 57234686 3230155 445780..446397 1 NC_002936.3 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 446397 rplC 3230155 rplC Dehalococcoides ethenogenes 195 50S ribosomal protein L3 YP_181218.1 445780 D 243164 CDS YP_181219.1 57234685 3230154 446400..447032 1 NC_002936.3 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 447032 rplD 3230154 rplD Dehalococcoides ethenogenes 195 50S ribosomal protein L4 YP_181219.1 446400 D 243164 CDS YP_181220.1 57234684 3230153 447045..447329 1 NC_002936.3 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 447329 rplW 3230153 rplW Dehalococcoides ethenogenes 195 50S ribosomal protein L23 YP_181220.1 447045 D 243164 CDS YP_181221.1 57234683 3230152 447355..448179 1 NC_002936.3 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 448179 rplB 3230152 rplB Dehalococcoides ethenogenes 195 50S ribosomal protein L2 YP_181221.1 447355 D 243164 CDS YP_181222.1 57234682 3230151 448186..448467 1 NC_002936.3 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 448467 rpsS 3230151 rpsS Dehalococcoides ethenogenes 195 30S ribosomal protein S19 YP_181222.1 448186 D 243164 CDS YP_181223.1 57234681 3230150 448498..448827 1 NC_002936.3 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 448827 rplV 3230150 rplV Dehalococcoides ethenogenes 195 50S ribosomal protein L22 YP_181223.1 448498 D 243164 CDS YP_181224.1 57234672 3230141 448836..449672 1 NC_002936.3 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 449672 rpsC 3230141 rpsC Dehalococcoides ethenogenes 195 30S ribosomal protein S3 YP_181224.1 448836 D 243164 CDS YP_181225.1 57234671 3230140 449674..450123 1 NC_002936.3 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 450123 rplP 3230140 rplP Dehalococcoides ethenogenes 195 50S ribosomal protein L16 YP_181225.1 449674 D 243164 CDS YP_181226.1 57234670 3230139 450125..450322 1 NC_002936.3 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 450322 rpmC 3230139 rpmC Dehalococcoides ethenogenes 195 50S ribosomal protein L29 YP_181226.1 450125 D 243164 CDS YP_181227.1 57234669 3230138 450330..450590 1 NC_002936.3 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 450590 rpsQ 3230138 rpsQ Dehalococcoides ethenogenes 195 30S ribosomal protein S17 YP_181227.1 450330 D 243164 CDS YP_181228.1 57234668 3230137 450615..450983 1 NC_002936.3 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 450983 rplN 3230137 rplN Dehalococcoides ethenogenes 195 50S ribosomal protein L14 YP_181228.1 450615 D 243164 CDS YP_181229.1 57234775 3230244 450994..451305 1 NC_002936.3 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 451305 rplX 3230244 rplX Dehalococcoides ethenogenes 195 50S ribosomal protein L24 YP_181229.1 450994 D 243164 CDS YP_181230.1 57234774 3230243 451305..451844 1 NC_002936.3 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 451844 rplE 3230243 rplE Dehalococcoides ethenogenes 195 50S ribosomal protein L5 YP_181230.1 451305 D 243164 CDS YP_181231.1 57235110 3230582 451853..452038 1 NC_002936.3 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 452038 rpsN 3230582 rpsN Dehalococcoides ethenogenes 195 30S ribosomal protein S14 YP_181231.1 451853 D 243164 CDS YP_181232.1 57234773 3230242 452072..452467 1 NC_002936.3 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 452467 rpsH 3230242 rpsH Dehalococcoides ethenogenes 195 30S ribosomal protein S8 YP_181232.1 452072 D 243164 CDS YP_181233.1 57234772 3230241 452483..453031 1 NC_002936.3 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 453031 rplF 3230241 rplF Dehalococcoides ethenogenes 195 50S ribosomal protein L6 YP_181233.1 452483 D 243164 CDS YP_181234.1 57234771 3230240 453031..453396 1 NC_002936.3 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 453396 rplR 3230240 rplR Dehalococcoides ethenogenes 195 50S ribosomal protein L18 YP_181234.1 453031 D 243164 CDS YP_181235.1 57234770 3230239 453413..453931 1 NC_002936.3 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 453931 rpsE 3230239 rpsE Dehalococcoides ethenogenes 195 30S ribosomal protein S5 YP_181235.1 453413 D 243164 CDS YP_181236.1 57234769 3230238 453924..454106 1 NC_002936.3 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 454106 rpmD 3230238 rpmD Dehalococcoides ethenogenes 195 50S ribosomal protein L30 YP_181236.1 453924 D 243164 CDS YP_181237.1 57234768 3230237 454107..454568 1 NC_002936.3 late assembly protein; 50S ribosomal protein L15 454568 rplO 3230237 rplO Dehalococcoides ethenogenes 195 50S ribosomal protein L15 YP_181237.1 454107 D 243164 CDS YP_181238.1 57234767 3230236 454549..455865 1 NC_002936.3 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 455865 secY 3230236 secY Dehalococcoides ethenogenes 195 preprotein translocase subunit SecY YP_181238.1 454549 D 243164 CDS YP_181239.1 57234758 3230227 455875..456525 1 NC_002936.3 identified by similarity to SP:P27142; match to protein family HMM TIGR01351; adenylate kinase 456525 adk 3230227 adk Dehalococcoides ethenogenes 195 adenylate kinase YP_181239.1 455875 D 243164 CDS YP_181240.1 57234757 3230226 456533..457288 1 NC_002936.3 identified by similarity to SP:P19994; match to protein family HMM TIGR00500; methionine aminopeptidase, type I 457288 map 3230226 map Dehalococcoides ethenogenes 195 methionine aminopeptidase, type I YP_181240.1 456533 D 243164 CDS YP_181241.1 57234756 3230225 457298..457519 1 NC_002936.3 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 457519 infA 3230225 infA Dehalococcoides ethenogenes 195 translation initiation factor IF-1 YP_181241.1 457298 D 243164 CDS YP_181242.1 57234755 3230224 457548..457661 1 NC_002936.3 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 457661 rpmJ 3230224 rpmJ Dehalococcoides ethenogenes 195 50S ribosomal protein L36 YP_181242.1 457548 D 243164 CDS YP_181243.1 57234754 3230223 457671..458060 1 NC_002936.3 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 458060 rpsM 3230223 rpsM Dehalococcoides ethenogenes 195 30S ribosomal protein S13 YP_181243.1 457671 D 243164 CDS YP_181244.1 57234753 3230222 458086..458478 1 NC_002936.3 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 458478 rpsK 3230222 rpsK Dehalococcoides ethenogenes 195 30S ribosomal protein S11 YP_181244.1 458086 D 243164 CDS YP_181245.1 57234752 3230221 458488..459111 1 NC_002936.3 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 459111 rpsD 3230221 rpsD Dehalococcoides ethenogenes 195 30S ribosomal protein S4 YP_181245.1 458488 D 243164 CDS YP_181246.1 57234751 3230220 459132..460124 1 NC_002936.3 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 460124 rpoA 3230220 rpoA Dehalococcoides ethenogenes 195 DNA-directed RNA polymerase subunit alpha YP_181246.1 459132 D 243164 CDS YP_181247.1 57234743 3230212 460155..460508 1 NC_002936.3 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 460508 rplQ 3230212 rplQ Dehalococcoides ethenogenes 195 50S ribosomal protein L17 YP_181247.1 460155 D 243164 CDS YP_181248.1 57234742 3230211 460538..461284 1 NC_002936.3 identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 461284 truA 3230211 truA Dehalococcoides ethenogenes 195 tRNA pseudouridine synthase A YP_181248.1 460538 D 243164 CDS YP_181249.1 57234741 3230210 461286..461717 1 NC_002936.3 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 461717 rplM 3230210 rplM Dehalococcoides ethenogenes 195 50S ribosomal protein L13 YP_181249.1 461286 D 243164 CDS YP_181250.1 57234740 3230209 461730..462128 1 NC_002936.3 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 462128 rpsI 3230209 rpsI Dehalococcoides ethenogenes 195 30S ribosomal protein S9 YP_181250.1 461730 D 243164 CDS YP_181251.1 57234739 3230208 complement(462206..462400) 1 NC_002936.3 hypothetical protein 462400 3230208 DET0507 Dehalococcoides ethenogenes 195 hypothetical protein YP_181251.1 462206 R 243164 CDS YP_181252.1 57234738 3230207 complement(462547..462642) 1 NC_002936.3 hypothetical protein 462642 3230207 DET0508 Dehalococcoides ethenogenes 195 hypothetical protein YP_181252.1 462547 R 243164 CDS YP_181253.1 57234737 3230206 complement(462708..463775) 1 NC_002936.3 catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate; bifunctional phosphoglucose/phosphomannose isomerase 463775 3230206 DET0509 Dehalococcoides ethenogenes 195 bifunctional phosphoglucose/phosphomannose isomerase YP_181253.1 462708 R 243164 CDS YP_181254.1 57234736 3230205 complement(463800..465227) 1 NC_002936.3 identified by similarity to OMNI:CT0279; phosphoglucomutase/phosphomannomutase 465227 3230205 DET0510 Dehalococcoides ethenogenes 195 phosphoglucomutase/phosphomannomutase YP_181254.1 463800 R 243164 CDS YP_181255.1 57234735 3230204 complement(465211..465414) 1 NC_002936.3 identified by similarity to OMNI:NTL01PH00939; hypothetical protein 465414 3230204 DET0511 Dehalococcoides ethenogenes 195 hypothetical protein YP_181255.1 465211 R 243164 CDS YP_181256.1 57234726 3230195 complement(465447..466667) 1 NC_002936.3 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 466667 metK-2 3230195 metK-2 Dehalococcoides ethenogenes 195 S-adenosylmethionine synthetase YP_181256.1 465447 R 243164 CDS YP_181257.1 57234725 3230194 complement(466677..467933) 1 NC_002936.3 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 467933 ahcY 3230194 ahcY Dehalococcoides ethenogenes 195 S-adenosyl-L-homocysteine hydrolase YP_181257.1 466677 R 243164 CDS YP_181258.1 57234724 3230193 complement(467941..469503) 1 NC_002936.3 identified by similarity to OMNI:NTL01NS4782; hypothetical protein 469503 3230193 DET0514 Dehalococcoides ethenogenes 195 hypothetical protein YP_181258.1 467941 R 243164 CDS YP_181259.1 57234723 3230192 complement(469503..469703) 1 NC_002936.3 identified by similarity to OMNI:TM0518; hypothetical protein 469703 3230192 DET0515 Dehalococcoides ethenogenes 195 hypothetical protein YP_181259.1 469503 R 243164 CDS YP_181260.1 57234722 3230191 complement(469700..470728) 1 NC_002936.3 identified by similarity to OMNI:NTL02SC5267; hypothetical protein 470728 3230191 DET0516 Dehalococcoides ethenogenes 195 hypothetical protein YP_181260.1 469700 R 243164 CDS YP_181261.1 57234721 3230190 complement(470721..471605) 1 NC_002936.3 identified by similarity to GP:5542154; match to protein family HMM TIGR01694; methylthioadenosine phosphorylase 471605 mtaP 3230190 mtaP Dehalococcoides ethenogenes 195 methylthioadenosine phosphorylase YP_181261.1 470721 R 243164 CDS YP_181262.1 57234720 3230189 complement(471674..472678) 1 NC_002936.3 identified by match to protein family HMM PF01008; match to protein family HMM TIGR00512; match to protein family HMM TIGR00524; aIF-2BI family translation initiation factor 472678 3230189 DET0518 Dehalococcoides ethenogenes 195 aIF-2BI family translation initiation factor YP_181262.1 471674 R 243164 CDS YP_181263.1 57234711 3230180 complement(472680..473777) 1 NC_002936.3 identified by similarity to OMNI:NTL01BMA0802; ABC transporter, permease 473777 3230180 DET0519 Dehalococcoides ethenogenes 195 ABC transporter, permease YP_181263.1 472680 R 243164 CDS YP_181264.1 57234710 3230179 complement(473774..474724) 1 NC_002936.3 identified by similarity to OMNI:TM1403; match to protein family HMM TIGR01188; daunorubicin resistance ABC transporter, ATP-binding protein 474724 3230179 DET0520 Dehalococcoides ethenogenes 195 daunorubicin resistance ABC transporter, ATP-binding protein YP_181264.1 473774 R 243164 CDS YP_181265.1 57234709 3230178 474796..475239 1 NC_002936.3 identified by similarity to OMNI:NTL01OI0672; hypothetical protein 475239 3230178 DET0521 Dehalococcoides ethenogenes 195 hypothetical protein YP_181265.1 474796 D 243164 CDS YP_181266.1 57234708 3230177 475236..475649 1 NC_002936.3 identified by similarity to OMNI:NTL01ML1916; hypothetical protein 475649 3230177 DET0522 Dehalococcoides ethenogenes 195 hypothetical protein YP_181266.1 475236 D 243164 CDS YP_181267.1 57234707 3230176 complement(475636..476196) 1 NC_002936.3 identified by similarity to GP:23978678; acetyltransferase 476196 3230176 DET0523 Dehalococcoides ethenogenes 195 acetyltransferase YP_181267.1 475636 R 243164 CDS YP_181268.1 57234706 3230175 complement(476201..477151) 1 NC_002936.3 HEAT repeat-containing PBS lyase 477151 3230175 DET0524 Dehalococcoides ethenogenes 195 HEAT repeat-containing PBS lyase YP_181268.1 476201 R 243164 CDS YP_181269.1 57234705 3230174 complement(477151..477981) 1 NC_002936.3 identified by similarity to OMNI:AF0525; hypothetical protein 477981 3230174 DET0525 Dehalococcoides ethenogenes 195 hypothetical protein YP_181269.1 477151 R 243164 CDS YP_181270.1 57234704 3230173 complement(477995..479296) 1 NC_002936.3 pmbA/tldD family protein 479296 3230173 DET0526 Dehalococcoides ethenogenes 195 pmbA/tldD family protein YP_181270.1 477995 R 243164 CDS YP_181271.1 57234695 3230164 complement(479298..480674) 1 NC_002936.3 identified by similarity to SP:P46473; TldD/PmbA family protein 480674 3230164 DET0527 Dehalococcoides ethenogenes 195 TldD/PmbA family protein YP_181271.1 479298 R 243164 CDS YP_181272.1 57234694 3230163 480812..482104 1 NC_002936.3 identified by match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase 482104 3230163 DET0528 Dehalococcoides ethenogenes 195 phosphoglucomutase/phosphomannomutase YP_181272.1 480812 D 243164 CDS YP_181273.1 57234693 3230162 482106..483308 1 NC_002936.3 identified by similarity to GP:1814004; glucose-1-phosphate thymidylyltransferase 483308 3230162 DET0529 Dehalococcoides ethenogenes 195 glucose-1-phosphate thymidylyltransferase YP_181273.1 482106 D 243164 CDS YP_181274.1 57234692 3230161 483324..484505 1 NC_002936.3 identified by similarity to SP:P08075; glucose-1-phosphate thymidylyltransferase 484505 3230161 DET0530 Dehalococcoides ethenogenes 195 glucose-1-phosphate thymidylyltransferase YP_181274.1 483324 D 243164 CDS YP_181275.1 57234691 3230160 484507..486288 1 NC_002936.3 identified by similarity to SP:Q56213; match to protein family HMM TIGR01135; glucosamine--fructose-6-phosphate aminotransferase 486288 glmS 3230160 glmS Dehalococcoides ethenogenes 195 glucosamine--fructose-6-phosphate aminotransferase YP_181275.1 484507 D 243164 CDS YP_181276.1 57234690 3230159 complement(486296..486748) 1 NC_002936.3 identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; phosphatidylethanolamine-binding protein 486748 3230159 DET0532 Dehalococcoides ethenogenes 195 phosphatidylethanolamine-binding protein YP_181276.1 486296 R 243164 CDS YP_181277.1 57234680 3230149 complement(486760..487464) 1 NC_002936.3 identified by match to protein family HMM TIGR01549; HAD family hydrolase 487464 3230149 DET0533 Dehalococcoides ethenogenes 195 HAD family hydrolase YP_181277.1 486760 R 243164 CDS YP_181278.1 57234679 3230148 487604..488908 1 NC_002936.3 identified by match to protein family HMM PF00278; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 488908 lysA 3230148 lysA Dehalococcoides ethenogenes 195 diaminopimelate decarboxylase YP_181278.1 487604 D 243164 CDS YP_181279.1 57234678 3230147 488923..489942 1 NC_002936.3 identified by similarity to SP:P37540; DNA polymerase III, delta prime subunit 489942 holB 3230147 holB Dehalococcoides ethenogenes 195 DNA polymerase III, delta prime subunit YP_181279.1 488923 D 243164 CDS YP_181280.1 57234677 3230146 489945..490778 1 NC_002936.3 identified by match to protein family HMM PF04468; hypothetical protein 490778 3230146 DET0536 Dehalococcoides ethenogenes 195 hypothetical protein YP_181280.1 489945 D 243164 CDS YP_181281.1 57234676 3230145 complement(490764..491297) 1 NC_002936.3 HNH endonuclease domain-containing protein 491297 3230145 DET0537 Dehalococcoides ethenogenes 195 HNH endonuclease domain-containing protein YP_181281.1 490764 R 243164 CDS YP_181282.1 57234675 3230144 complement(491369..492649) 1 NC_002936.3 identified by similarity to SP:P07905; ATP-binding protein 492649 3230144 DET0538 Dehalococcoides ethenogenes 195 ATP-binding protein YP_181282.1 491369 R 243164 CDS YP_181283.1 57234674 3230143 complement(492705..493415) 1 NC_002936.3 identified by match to protein family HMM TIGR01446; DnaD and phage-associated domain-containing protein 493415 3230143 DET0539 Dehalococcoides ethenogenes 195 DnaD and phage-associated domain-containing protein YP_181283.1 492705 R 243164 CDS YP_181284.1 57234673 3230142 complement(493412..494788) 1 NC_002936.3 identified by match to protein family HMM PF00772; match to protein family HMM TIGR00665; replicative DNA helicase 494788 dnaB 3230142 dnaB Dehalococcoides ethenogenes 195 replicative DNA helicase YP_181284.1 493412 R 243164 CDS YP_181285.1 57234664 3230133 complement(494789..495244) 1 NC_002936.3 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 495244 rplI 3230133 rplI Dehalococcoides ethenogenes 195 50S ribosomal protein L9 YP_181285.1 494789 R 243164 CDS YP_181286.1 57234663 3230132 complement(495314..496234) 1 NC_002936.3 identified by match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 496234 trxB 3230132 trxB Dehalococcoides ethenogenes 195 thioredoxin-disulfide reductase YP_181286.1 495314 R 243164 CDS YP_181287.1 57234662 3230131 complement(496215..497258) 1 NC_002936.3 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 497258 plsX 3230131 plsX Dehalococcoides ethenogenes 195 glycerol-3-phosphate acyltransferase PlsX YP_181287.1 496215 R 243164 CDS YP_181288.1 57234661 3230130 complement(497298..498149) 1 NC_002936.3 identified by match to protein family HMM TIGR00241; BadF/BadG/BcrA/BcrD ATPase 498149 3230130 DET0544 Dehalococcoides ethenogenes 195 BadF/BadG/BcrA/BcrD ATPase YP_181288.1 497298 R 243164 CDS YP_181289.1 57234660 3230129 complement(498174..499367) 1 NC_002936.3 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; amidohydrolase 499367 3230129 DET0545 Dehalococcoides ethenogenes 195 amidohydrolase YP_181289.1 498174 R 243164 CDS YP_181290.1 57234659 3230128 499589..502429 1 NC_002936.3 identified by similarity to SP:O34863; match to protein family HMM TIGR00630; excinuclease ABC, A subunit 502429 uvrA 3230128 uvrA Dehalococcoides ethenogenes 195 excinuclease ABC, A subunit YP_181290.1 499589 D 243164 CDS YP_181291.1 57234658 3230127 502495..503046 1 NC_002936.3 identified by match to protein family HMM TIGR00277; HDIG domain-containing protein 503046 3230127 DET0547 Dehalococcoides ethenogenes 195 HDIG domain-containing protein YP_181291.1 502495 D 243164 CDS YP_181292.1 57234657 3230126 503156..503359 1 NC_002936.3 DNA-binding protein 503359 3230126 DET0548 Dehalococcoides ethenogenes 195 DNA-binding protein YP_181292.1 503156 D 243164 CDS YP_181293.1 57234648 3230117 complement(503356..505935) 1 NC_002936.3 identified by similarity to SP:P13458; exonuclease SbcC 505935 3230117 DET0549 Dehalococcoides ethenogenes 195 exonuclease SbcC YP_181293.1 503356 R 243164 CDS YP_181294.1 57234647 3230116 506011..506130 1 NC_002936.3 hypothetical protein 506130 3230116 DET0550 Dehalococcoides ethenogenes 195 hypothetical protein YP_181294.1 506011 D 243164 CDS YP_181295.1 57234646 3230115 complement(506110..507672) 1 NC_002936.3 identified by similarity to SP:P06224; match to protein family HMM PF00140; match to protein family HMM PF04539; RNA polymerase sigma factor RpoD 507672 rpoD 3230115 rpoD Dehalococcoides ethenogenes 195 RNA polymerase sigma factor RpoD YP_181295.1 506110 R 243164 CDS YP_181296.1 57234645 3230114 complement(507673..509445) 1 NC_002936.3 identified by match to protein family HMM TIGR01391; DNA primase 509445 dnaG 3230114 dnaG Dehalococcoides ethenogenes 195 DNA primase YP_181296.1 507673 R 243164 CDS YP_181297.1 57234644 3230113 complement(509447..510484) 1 NC_002936.3 dGTPase type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 510484 3230113 DET0553 Dehalococcoides ethenogenes 195 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_181297.1 509447 R 243164 CDS YP_181298.1 57234643 3230112 complement(510481..512757) 1 NC_002936.3 identified by match to protein family HMM PF00391; match to protein family HMM TIGR01418; phosphoenolpyruvate synthase 512757 ppsA 3230112 ppsA Dehalococcoides ethenogenes 195 phosphoenolpyruvate synthase YP_181298.1 510481 R 243164 CDS YP_181299.1 57234642 3230110 complement(513481..513648) 1 NC_002936.3 hypothetical protein 513648 3230110 DET0556 Dehalococcoides ethenogenes 195 hypothetical protein YP_181299.1 513481 R 243164 CDS YP_181300.1 57234633 3230101 513683..513916 1 NC_002936.3 hypothetical protein 513916 3230101 DET0557 Dehalococcoides ethenogenes 195 hypothetical protein YP_181300.1 513683 D 243164 CDS YP_181301.1 57234632 3230100 513919..514863 1 NC_002936.3 identified by match to protein family HMM TIGR01131; ATP synthase F0 subunit A 514863 atpB 3230100 atpB Dehalococcoides ethenogenes 195 ATP synthase F0 subunit A YP_181301.1 513919 D 243164 CDS YP_181302.1 57234631 3230099 514904..515134 1 NC_002936.3 identified by match to protein family HMM TIGR01260; ATP synthase F0 subunit C 515134 atpE 3230099 atpE Dehalococcoides ethenogenes 195 ATP synthase F0 subunit C YP_181302.1 514904 D 243164 CDS YP_181303.1 57234630 3230098 515159..515668 1 NC_002936.3 identified by match to protein family HMM TIGR01144; ATP synthase F0 subunit B 515668 atpF 3230098 atpF Dehalococcoides ethenogenes 195 ATP synthase F0 subunit B YP_181303.1 515159 D 243164 CDS YP_181304.1 57234629 3230097 515689..516231 1 NC_002936.3 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 516231 atpH 3230097 atpH Dehalococcoides ethenogenes 195 F0F1 ATP synthase subunit delta YP_181304.1 515689 D 243164 CDS YP_181305.1 57234628 3230096 516254..517765 1 NC_002936.3 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 517765 atpA 3230096 atpA Dehalococcoides ethenogenes 195 F0F1 ATP synthase subunit alpha YP_181305.1 516254 D 243164 CDS YP_181306.1 57234627 3230095 517790..518647 1 NC_002936.3 identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma 518647 atpG 3230095 atpG Dehalococcoides ethenogenes 195 ATP synthase F1 subunit gamma YP_181306.1 517790 D 243164 CDS YP_181307.1 57234667 3230136 518663..520057 1 NC_002936.3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 520057 atpD 3230136 atpD Dehalococcoides ethenogenes 195 F0F1 ATP synthase subunit beta YP_181307.1 518663 D 243164 CDS YP_181308.1 57234666 3230135 520082..520504 1 NC_002936.3 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 520504 atpC 3230135 atpC Dehalococcoides ethenogenes 195 F0F1 ATP synthase subunit epsilon YP_181308.1 520082 D 243164 CDS YP_181309.1 57234665 3230134 complement(520575..521078) 1 NC_002936.3 identified by similarity to SP:P21504; 16S rRNA processing protein RimM 521078 rimM 3230134 rimM Dehalococcoides ethenogenes 195 16S rRNA processing protein RimM YP_181309.1 520575 R 243164 CDS YP_181310.1 57234656 3230125 complement(521166..521393) 1 NC_002936.3 identified by similarity to SP:Q8XJP5; hypothetical protein 521393 3230125 DET0567 Dehalococcoides ethenogenes 195 hypothetical protein YP_181310.1 521166 R 243164 CDS YP_181311.1 57234655 3230124 complement(521409..521657) 1 NC_002936.3 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 521657 rpsP 3230124 rpsP Dehalococcoides ethenogenes 195 30S ribosomal protein S16 YP_181311.1 521409 R 243164 CDS YP_181312.1 57234654 3230123 521809..522474 1 NC_002936.3 identified by match to protein family HMM PF04493; endonuclease V 522474 nfi 3230123 nfi Dehalococcoides ethenogenes 195 endonuclease V YP_181312.1 521809 D 243164 CDS YP_181313.1 57234653 3230122 join(522589..522645,522647..523678) 1 NC_002936.3 identified by similarity to GB:CAB15546.1; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2, programmed frameshift 523678 prfB 3230122 prfB Dehalococcoides ethenogenes 195 peptide chain release factor 2, programmed frameshift YP_181313.1 522589 D 243164 CDS YP_181314.1 57234652 3230121 523675..524901 1 NC_002936.3 hypothetical protein 524901 3230121 DET0571 Dehalococcoides ethenogenes 195 hypothetical protein YP_181314.1 523675 D 243164 CDS YP_181315.1 57234651 3230120 524903..525571 1 NC_002936.3 identified by match to protein family HMM TIGR00608; RadC family DNA repair protein 525571 3230120 DET0572 Dehalococcoides ethenogenes 195 RadC family DNA repair protein YP_181315.1 524903 D 243164 CDS YP_181316.1 57234650 3230119 525574..527166 1 NC_002936.3 identified by similarity to SP:P23843; oligopeptide-binding protein 527166 3230119 DET0573 Dehalococcoides ethenogenes 195 oligopeptide-binding protein YP_181316.1 525574 D 243164 CDS YP_181317.1 57234649 3230118 complement(527537..527821) 1 NC_002936.3 hypothetical protein 527821 3230118 DET0575 Dehalococcoides ethenogenes 195 hypothetical protein YP_181317.1 527537 R 243164 CDS YP_181318.1 57234641 3230109 complement(528044..529195) 1 NC_002936.3 aminotransferase, classes I and II 529195 3230109 DET0576 Dehalococcoides ethenogenes 195 aminotransferase, classes I and II YP_181318.1 528044 R 243164 CDS YP_181319.1 57234640 3230108 complement(529182..530423) 1 NC_002936.3 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 530423 serS 3230108 serS Dehalococcoides ethenogenes 195 seryl-tRNA synthetase YP_181319.1 529182 R 243164 CDS YP_181320.1 57234639 3230107 complement(530455..531951) 1 NC_002936.3 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 531951 lysS 3230107 lysS Dehalococcoides ethenogenes 195 lysyl-tRNA synthetase YP_181320.1 530455 R 243164 CDS YP_181321.1 57234638 3230106 532182..532352 1 NC_002936.3 hypothetical protein 532352 3230106 DET0579 Dehalococcoides ethenogenes 195 hypothetical protein YP_181321.1 532182 D 243164 CDS YP_181322.1 57234637 3230105 complement(532376..533137) 1 NC_002936.3 identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; recombination protein RecO 533137 recO 3230105 recO Dehalococcoides ethenogenes 195 recombination protein RecO YP_181322.1 532376 R 243164 CDS YP_181323.1 57234636 3230104 complement(533267..533989) 1 NC_002936.3 hypothetical protein 533989 3230104 DET0581 Dehalococcoides ethenogenes 195 hypothetical protein YP_181323.1 533267 R 243164 CDS YP_181324.1 57234635 3230103 complement(533991..535055) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA1674; match to protein family HMM TIGR00383; magnesium and cobalt transport protein CorA 535055 corA 3230103 corA Dehalococcoides ethenogenes 195 magnesium and cobalt transport protein CorA YP_181324.1 533991 R 243164 CDS YP_181325.1 57234634 3230102 complement(535094..535708) 1 NC_002936.3 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 535708 recR 3230102 recR Dehalococcoides ethenogenes 195 recombination protein RecR YP_181325.1 535094 R 243164 CDS YP_181326.1 57234626 3230094 complement(535729..536028) 1 NC_002936.3 identified by similarity to SP:Q8RDI5; hypothetical protein 536028 3230094 DET0584 Dehalococcoides ethenogenes 195 hypothetical protein YP_181326.1 535729 R 243164 CDS YP_181327.1 57234625 3230093 complement(536038..537717) 1 NC_002936.3 identified by similarity to SP:P09122; DNA polymerase III, gamma and tau subunits 537717 3230093 DET0585 Dehalococcoides ethenogenes 195 DNA polymerase III, gamma and tau subunits YP_181327.1 536038 R 243164 CDS YP_181328.1 57234624 3230092 complement(537774..537929) 1 NC_002936.3 hypothetical protein 537929 3230092 DET0586 Dehalococcoides ethenogenes 195 hypothetical protein YP_181328.1 537774 R 243164 CDS YP_181329.1 57234623 3230091 complement(537963..538385) 1 NC_002936.3 identified by similarity to OMNI:NTL01CA2954; hypothetical protein 538385 3230091 DET0587 Dehalococcoides ethenogenes 195 hypothetical protein YP_181329.1 537963 R 243164 CDS YP_181330.1 57234622 3230090 complement(538685..539059) 1 NC_002936.3 identified by similarity to OMNI:NTL01TT1546; hypothetical protein 539059 3230090 DET0588 Dehalococcoides ethenogenes 195 hypothetical protein YP_181330.1 538685 R 243164 CDS YP_181331.1 57234621 3230089 complement(539264..540442) 1 NC_002936.3 tubulin/FtsZ family protein 540442 3230089 DET0589 Dehalococcoides ethenogenes 195 tubulin/FtsZ family protein YP_181331.1 539264 R 243164 CDS YP_181332.1 57234620 3230088 complement(540536..541540) 1 NC_002936.3 identified by match to protein family HMM PF00044; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 541540 gap 3230088 gap Dehalococcoides ethenogenes 195 glyceraldehyde-3-phosphate dehydrogenase, type I YP_181332.1 540536 R 243164 CDS YP_181333.1 57234611 3230079 complement(541562..542581) 1 NC_002936.3 identified by similarity to OMNI:NTL01CA3558; hypothetical protein 542581 3230079 DET0591 Dehalococcoides ethenogenes 195 hypothetical protein YP_181333.1 541562 R 243164 CDS YP_181334.1 57234610 3230078 complement(542595..542693) 1 NC_002936.3 hypothetical protein 542693 3230078 DET0592 Dehalococcoides ethenogenes 195 hypothetical protein YP_181334.1 542595 R 243164 CDS YP_181335.1 57234609 3230077 complement(542721..544007) 1 NC_002936.3 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 544007 eno 3230077 eno Dehalococcoides ethenogenes 195 phosphopyruvate hydratase YP_181335.1 542721 R 243164 CDS YP_181336.1 57234608 3230076 complement(544026..544505) 1 NC_002936.3 identified by match to protein family HMM TIGR00725; hypothetical protein 544505 3230076 DET0594 Dehalococcoides ethenogenes 195 hypothetical protein YP_181336.1 544026 R 243164 CDS YP_181337.1 57234607 3230075 complement(544553..545122) 1 NC_002936.3 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 545122 pth 3230075 pth Dehalococcoides ethenogenes 195 peptidyl-tRNA hydrolase YP_181337.1 544553 R 243164 CDS YP_181338.1 57234606 3230074 complement(545122..547155) 1 NC_002936.3 identified by match to protein family HMM TIGR00575; DNA ligase, NAD-dependent 547155 ligA 3230074 ligA Dehalococcoides ethenogenes 195 DNA ligase, NAD-dependent YP_181338.1 545122 R 243164 CDS YP_181339.1 57234605 3230073 547300..548628 1 NC_002936.3 identified by similarity to OMNI:CT0137; hypothetical protein 548628 3230073 DET0597 Dehalococcoides ethenogenes 195 hypothetical protein YP_181339.1 547300 D 243164 CDS YP_181340.1 57234604 3230072 complement(548701..549288) 1 NC_002936.3 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 549288 3230072 DET0598 Dehalococcoides ethenogenes 195 glutamine amidotransferase subunit PdxT YP_181340.1 548701 R 243164 CDS YP_181341.1 57234596 3230064 complement(549361..550941) 1 NC_002936.3 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 550941 serA 3230064 serA Dehalococcoides ethenogenes 195 D-3-phosphoglycerate dehydrogenase YP_181341.1 549361 R 243164 CDS YP_181342.1 57234595 3230063 complement(550943..552031) 1 NC_002936.3 identified by similarity to SP:P16421; soluble hydrogenase, tritium exchange subunit 552031 3230063 DET0600 Dehalococcoides ethenogenes 195 soluble hydrogenase, tritium exchange subunit YP_181342.1 550943 R 243164 CDS YP_181343.1 57234594 3230062 complement(552091..553281) 1 NC_002936.3 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 553281 tyrS 3230062 tyrS Dehalococcoides ethenogenes 195 tyrosyl-tRNA synthetase YP_181343.1 552091 R 243164 CDS YP_181344.1 57234593 3230061 complement(553288..554205) 1 NC_002936.3 identified by similarity to SP:Q59263; match to protein family HMM PF01687; match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF 554205 ribF 3230061 ribF Dehalococcoides ethenogenes 195 riboflavin biosynthesis protein RibF YP_181344.1 553288 R 243164 CDS YP_181345.1 57234592 3230060 554608..558426 1 NC_002936.3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 558426 rpoB 3230060 rpoB Dehalococcoides ethenogenes 195 DNA-directed RNA polymerase subunit beta YP_181345.1 554608 D 243164 CDS YP_181346.1 57234591 3230059 558413..562300 1 NC_002936.3 identified by similarity to SP:P37871; match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; DNA-directed RNA polymerase, beta' subunit 562300 rpoC 3230059 rpoC Dehalococcoides ethenogenes 195 DNA-directed RNA polymerase, beta' subunit YP_181346.1 558413 D 243164 CDS YP_181347.1 57234590 3230058 complement(562272..562415) 1 NC_002936.3 hypothetical protein 562415 3230058 DET0605 Dehalococcoides ethenogenes 195 hypothetical protein YP_181347.1 562272 R 243164 CDS YP_181348.1 57234581 3230049 562474..563523 1 NC_002936.3 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 563523 ruvB 3230049 ruvB Dehalococcoides ethenogenes 195 Holliday junction DNA helicase RuvB YP_181348.1 562474 D 243164 CDS YP_181349.1 57234580 3230048 563513..564061 1 NC_002936.3 identified by match to protein family HMM PF02677; hypothetical protein 564061 3230048 DET0607 Dehalococcoides ethenogenes 195 hypothetical protein YP_181349.1 563513 D 243164 CDS YP_181350.1 57234579 3230047 564136..564777 1 NC_002936.3 identified by match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 564777 rimI 3230047 rimI Dehalococcoides ethenogenes 195 ribosomal-protein-alanine acetyltransferase YP_181350.1 564136 D 243164 CDS YP_181351.1 57234578 3230046 complement(564795..565022) 1 NC_002936.3 hypothetical protein 565022 3230046 DET0609 Dehalococcoides ethenogenes 195 hypothetical protein YP_181351.1 564795 R 243164 CDS YP_181352.1 57234577 3230045 complement(565087..565626) 1 NC_002936.3 identified by similarity to GP:20905475; hypothetical protein 565626 3230045 DET0610 Dehalococcoides ethenogenes 195 hypothetical protein YP_181352.1 565087 R 243164 CDS YP_181353.1 57234576 3230044 complement(565655..566329) 1 NC_002936.3 identified by similarity to GP:5199108; hypothetical protein 566329 3230044 DET0611 Dehalococcoides ethenogenes 195 hypothetical protein YP_181353.1 565655 R 243164 CDS YP_181354.1 57234575 3230043 566373..567752 1 NC_002936.3 identified by match to protein family HMM TIGR01211; ELP3 family histone acetyltransferase 567752 3230043 DET0612 Dehalococcoides ethenogenes 195 ELP3 family histone acetyltransferase YP_181354.1 566373 D 243164 CDS YP_181355.1 57234574 3230042 567776..567868 1 NC_002936.3 hypothetical protein 567868 3230042 DET0613 Dehalococcoides ethenogenes 195 hypothetical protein YP_181355.1 567776 D 243164 CDS YP_181356.1 57234567 3230035 567965..568903 1 NC_002936.3 identified by similarity to GP:1747407; hydrogenase, group 3, VhuG subunit 568903 3230035 DET0614 Dehalococcoides ethenogenes 195 hydrogenase, group 3, VhuG subunit YP_181356.1 567965 D 243164 CDS YP_181357.1 57234566 3230034 568933..570372 1 NC_002936.3 identified by similarity to GP:1747408; hydrogenase, group 3, VhuA subunit 570372 3230034 DET0615 Dehalococcoides ethenogenes 195 hydrogenase, group 3, VhuA subunit YP_181357.1 568933 D 243164 CDS YP_181358.1 57234565 3230033 570375..570878 1 NC_002936.3 identified by similarity to SP:P19930; match to protein family HMM TIGR00072; hydrogenase maturation protease 570878 3230033 DET0616 Dehalococcoides ethenogenes 195 hydrogenase maturation protease YP_181358.1 570375 D 243164 CDS YP_181359.1 57234564 3230032 complement(570875..571180) 1 NC_002936.3 hypothetical protein 571180 3230032 DET0617 Dehalococcoides ethenogenes 195 hypothetical protein YP_181359.1 570875 R 243164 CDS YP_181360.1 57234563 3230031 complement(571197..571733) 1 NC_002936.3 identified by similarity to SP:P35160; thiol-disulfide oxidoreductase 571733 3230031 DET0618 Dehalococcoides ethenogenes 195 thiol-disulfide oxidoreductase YP_181360.1 571197 R 243164 CDS YP_181361.1 57234562 3230030 complement(571735..572436) 1 NC_002936.3 identified by similarity to SP:P45706; cytochrome c-type biogenesis protein CcdA 572436 ccdA 3230030 ccdA Dehalococcoides ethenogenes 195 cytochrome c-type biogenesis protein CcdA YP_181361.1 571735 R 243164 CDS YP_181362.1 57234561 3230029 572520..573659 1 NC_002936.3 identified by similarity to GP:28410532; hypothetical protein 573659 3230029 DET0620 Dehalococcoides ethenogenes 195 hypothetical protein YP_181362.1 572520 D 243164 CDS YP_181363.1 57234560 3230028 573681..574169 1 NC_002936.3 identified by similarity to OMNI:NTL01BH1315; hypothetical protein 574169 3230028 DET0621 Dehalococcoides ethenogenes 195 hypothetical protein YP_181363.1 573681 D 243164 CDS YP_181364.1 57234551 3230019 574360..575109 1 NC_002936.3 radical SAM domain-containing protein 575109 3230019 DET0622 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_181364.1 574360 D 243164 CDS YP_181365.1 57234550 3230018 575110..576909 1 NC_002936.3 identified by similarity to OMNI:TM0118; ribonucleotide reductase 576909 nrd-3 3230018 nrd-3 Dehalococcoides ethenogenes 195 ribonucleotide reductase YP_181365.1 575110 D 243164 CDS YP_181366.1 57234549 3230017 complement(576906..577910) 1 NC_002936.3 identified by similarity to OMNI:TM0186; match to protein family HMM TIGR00277; response regulator 577910 3230017 DET0624 Dehalococcoides ethenogenes 195 response regulator YP_181366.1 576906 R 243164 CDS YP_181367.1 57234548 3230016 complement(577937..580498) 1 NC_002936.3 identified by match to protein family HMM TIGR00229; sensory box sensor histidine kinase 580498 3230016 DET0625 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_181367.1 577937 R 243164 CDS YP_181368.1 57234547 3230015 complement(580653..580985) 1 NC_002936.3 identified by similarity to OMNI:SAG1430; hypothetical protein 580985 3230015 DET0626 Dehalococcoides ethenogenes 195 hypothetical protein YP_181368.1 580653 R 243164 CDS YP_181369.1 57234546 3230014 580984..582333 1 NC_002936.3 hypothetical protein 582333 3230014 DET0627 Dehalococcoides ethenogenes 195 hypothetical protein YP_181369.1 580984 D 243164 CDS YP_181370.1 57234545 3230013 582476..583795 1 NC_002936.3 identified by match to protein family HMM TIGR00238; radical SAM domain-containing protein 583795 3230013 DET0628 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_181370.1 582476 D 243164 CDS YP_181371.1 57234544 3230012 583767..584783 1 NC_002936.3 D-alanine--D-alanine ligase 584783 3230012 DET0629 Dehalococcoides ethenogenes 195 D-alanine--D-alanine ligase YP_181371.1 583767 D 243164 CDS YP_181372.1 57234543 3230011 584917..585348 1 NC_002936.3 FUR family transcriptional regulator 585348 3230011 DET0630 Dehalococcoides ethenogenes 195 FUR family transcriptional regulator YP_181372.1 584917 D 243164 CDS YP_181373.1 57234535 3230003 585345..586217 1 NC_002936.3 cation ABC transporter, periplasmc-binding protein 586217 3230003 DET0631 Dehalococcoides ethenogenes 195 cation ABC transporter, periplasmc-binding protein YP_181373.1 585345 D 243164 CDS YP_181374.1 57234534 3230002 586220..586984 1 NC_002936.3 identified by similarity to SP:Q9XDA6; cation ABC transporter, ATP-binding protein 586984 3230002 DET0632 Dehalococcoides ethenogenes 195 cation ABC transporter, ATP-binding protein YP_181374.1 586220 D 243164 CDS YP_181375.1 57234533 3230001 586981..587802 1 NC_002936.3 identified by similarity to GP:5019735; cation ABC transporter, permease 587802 3230001 DET0633 Dehalococcoides ethenogenes 195 cation ABC transporter, permease YP_181375.1 586981 D 243164 CDS YP_181376.1 57234532 3230000 complement(587799..587936) 1 NC_002936.3 hypothetical protein 587936 3230000 DET0634 Dehalococcoides ethenogenes 195 hypothetical protein YP_181376.1 587799 R 243164 CDS YP_181377.1 57234531 3229999 complement(587852..588202) 1 NC_002936.3 hypothetical protein 588202 3229999 DET0635 Dehalococcoides ethenogenes 195 hypothetical protein YP_181377.1 587852 R 243164 CDS YP_181378.1 57234530 3229998 complement(588319..589449) 1 NC_002936.3 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 589449 ftsZ-2 3229998 ftsZ-2 Dehalococcoides ethenogenes 195 cell division protein FtsZ YP_181378.1 588319 R 243164 CDS YP_181379.1 57234529 3229997 complement(589482..590684) 1 NC_002936.3 identified by similarity to SP:P28264; match to protein family HMM TIGR01174; cell division protein FtsA 590684 ftsA-2 3229997 ftsA-2 Dehalococcoides ethenogenes 195 cell division protein FtsA YP_181379.1 589482 R 243164 CDS YP_181380.1 57234528 3229996 complement(590745..590954) 1 NC_002936.3 hypothetical protein 590954 3229996 DET0638 Dehalococcoides ethenogenes 195 hypothetical protein YP_181380.1 590745 R 243164 CDS YP_181381.1 57234521 3229989 591194..591883 1 NC_002936.3 hypothetical protein 591883 3229989 DET0639 Dehalococcoides ethenogenes 195 hypothetical protein YP_181381.1 591194 D 243164 CDS YP_181382.1 57234520 3229988 592044..592907 1 NC_002936.3 universal stress protein 592907 3229988 DET0640 Dehalococcoides ethenogenes 195 universal stress protein YP_181382.1 592044 D 243164 CDS YP_181383.1 57234519 3229987 592961..593587 1 NC_002936.3 cyclase 593587 3229987 DET0641 Dehalococcoides ethenogenes 195 cyclase YP_181383.1 592961 D 243164 CDS YP_181384.1 57234619 3230087 593592..594254 1 NC_002936.3 ribulose-phosphate 3-epimerase 594254 3230087 DET0642 Dehalococcoides ethenogenes 195 ribulose-phosphate 3-epimerase YP_181384.1 593592 D 243164 CDS YP_181385.1 57234618 3230086 complement(594251..594709) 1 NC_002936.3 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 594709 3230086 DET0643 Dehalococcoides ethenogenes 195 ribose-5-phosphate isomerase B YP_181385.1 594251 R 243164 CDS YP_181386.1 57234617 3230085 complement(594702..596702) 1 NC_002936.3 identified by match to protein family HMM TIGR00232; transketolase 596702 tkt-1 3230085 tkt-1 Dehalococcoides ethenogenes 195 transketolase YP_181386.1 594702 R 243164 CDS YP_181387.1 57234616 3230084 complement(596747..597262) 1 NC_002936.3 nitroreductase 597262 3230084 DET0645 Dehalococcoides ethenogenes 195 nitroreductase YP_181387.1 596747 R 243164 CDS YP_181388.1 57234615 3230083 597389..598231 1 NC_002936.3 identified by similarity to OMNI:NTL02MA4536; hypothetical protein 598231 3230083 DET0646 Dehalococcoides ethenogenes 195 hypothetical protein YP_181388.1 597389 D 243164 CDS YP_181389.1 57234614 3230082 598326..598493 1 NC_002936.3 hypothetical protein 598493 3230082 DET0647 Dehalococcoides ethenogenes 195 hypothetical protein YP_181389.1 598326 D 243164 CDS YP_181390.1 57234613 3230081 598583..598999 1 NC_002936.3 identified by similarity to OMNI:NTL04PA0672; hypothetical protein 598999 3230081 DET0648 Dehalococcoides ethenogenes 195 hypothetical protein YP_181390.1 598583 D 243164 CDS YP_181391.1 57234612 3230080 complement(599284..599463) 1 NC_002936.3 hypothetical protein 599463 3230080 DET0649 Dehalococcoides ethenogenes 195 hypothetical protein YP_181391.1 599284 R 243164 CDS YP_181392.1 57234603 3230071 599608..600624 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0342; ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic binding protein 600624 3230071 DET0650 Dehalococcoides ethenogenes 195 ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic binding protein YP_181392.1 599608 D 243164 CDS YP_181393.1 57234602 3230070 600763..601767 1 NC_002936.3 identified by similarity to PIR:S54438; ABC-type cobalamin/Fe3+-siderophores transport systems, permease component 601767 3230070 DET0651 Dehalococcoides ethenogenes 195 ABC-type cobalamin/Fe3+-siderophores transport systems, permease component YP_181393.1 600763 D 243164 CDS YP_181394.1 57234601 3230069 601779..602603 1 NC_002936.3 identified by similarity to SP:P23878; ABC-type cobalamin/Fe3+-siderophores transport system, ATP-binding protein 602603 3230069 DET0652 Dehalococcoides ethenogenes 195 ABC-type cobalamin/Fe3+-siderophores transport system, ATP-binding protein YP_181394.1 601779 D 243164 CDS YP_181395.1 57234600 3230068 602593..603363 1 NC_002936.3 identified by similarity to OMNI:MJ1613; hypothetical protein 603363 3230068 DET0653 Dehalococcoides ethenogenes 195 hypothetical protein YP_181395.1 602593 D 243164 CDS YP_181396.1 57234599 3230067 603365..604291 1 NC_002936.3 identified by match to protein family HMM TIGR00380; cobalamin biosynthesis protein CobD 604291 cobD-2 3230067 cobD-2 Dehalococcoides ethenogenes 195 cobalamin biosynthesis protein CobD YP_181396.1 603365 D 243164 CDS YP_181397.1 57234598 3230066 604275..605381 1 NC_002936.3 identified by similarity to SP:P17731; histidinol-phosphate aminotransferase 605381 3230066 DET0655 Dehalococcoides ethenogenes 195 histidinol-phosphate aminotransferase YP_181397.1 604275 D 243164 CDS YP_181398.1 57234597 3230065 complement(605514..605723) 1 NC_002936.3 hypothetical protein 605723 3230065 DET0656 Dehalococcoides ethenogenes 195 hypothetical protein YP_181398.1 605514 R 243164 CDS YP_181399.1 57234589 3230057 605751..606809 1 NC_002936.3 identified by similarity to SP:P36562; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 606809 cobT-1 3230057 cobT-1 Dehalococcoides ethenogenes 195 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_181399.1 605751 D 243164 CDS YP_181400.1 57234588 3230056 606847..607611 1 NC_002936.3 identified by similarity to SP:P36561; match to protein family HMM TIGR00317; cobalamin 5'-phosphate synthase 607611 cobS-1 3230056 cobS-1 Dehalococcoides ethenogenes 195 cobalamin 5'-phosphate synthase YP_181400.1 606847 D 243164 CDS YP_181401.1 57234587 3230055 607631..608233 1 NC_002936.3 identified by similarity to SP:P52086; alpha-ribazole-5'-phosphate phosphatase 608233 3230055 DET0659 Dehalococcoides ethenogenes 195 alpha-ribazole-5'-phosphate phosphatase YP_181401.1 607631 D 243164 CDS YP_181402.1 57234586 3230054 608287..608853 1 NC_002936.3 identified by similarity to SP:P46886; cobinamide kinase/cobinamide phosphate guanylyltransferase 608853 cobU-1 3230054 cobU-1 Dehalococcoides ethenogenes 195 cobinamide kinase/cobinamide phosphate guanylyltransferase YP_181402.1 608287 D 243164 CDS YP_181403.1 57234585 3230053 complement(608931..609254) 1 NC_002936.3 identified by match to protein family HMM TIGR01068; thioredoxin 609254 trx-1 3230053 trx-1 Dehalococcoides ethenogenes 195 thioredoxin YP_181403.1 608931 R 243164 CDS YP_181404.1 57234584 3230052 complement(609345..610490) 1 NC_002936.3 sensor histidine kinase 610490 3230052 DET0662 Dehalococcoides ethenogenes 195 sensor histidine kinase YP_181404.1 609345 R 243164 CDS YP_181405.1 57234583 3230051 complement(610507..611181) 1 NC_002936.3 LuxR family DNA-binding response regulator 611181 3230051 DET0663 Dehalococcoides ethenogenes 195 LuxR family DNA-binding response regulator YP_181405.1 610507 R 243164 CDS YP_181406.1 57234582 3230050 complement(611252..611896) 1 NC_002936.3 hypothetical protein 611896 3230050 DET0664 Dehalococcoides ethenogenes 195 hypothetical protein YP_181406.1 611252 R 243164 CDS YP_181407.1 57234573 3230041 complement(611915..613261) 1 NC_002936.3 part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit gamma 613261 acsC-1 3230041 acsC-1 Dehalococcoides ethenogenes 195 acetyl-CoA decarbonylase/synthase complex subunit gamma YP_181407.1 611915 R 243164 CDS YP_181408.1 57234572 3230040 complement(613282..615483) 1 NC_002936.3 in acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta 615483 3230040 DET0666 Dehalococcoides ethenogenes 195 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta YP_181408.1 613282 R 243164 CDS YP_181409.1 57234571 3230039 complement(615543..616484) 1 NC_002936.3 part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit delta 616484 acsD-1 3230039 acsD-1 Dehalococcoides ethenogenes 195 acetyl-CoA decarbonylase/synthase complex subunit delta YP_181409.1 615543 R 243164 CDS YP_181410.1 57234570 3230038 complement(616520..617410) 1 NC_002936.3 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 617410 folD-1 3230038 folD-1 Dehalococcoides ethenogenes 195 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_181410.1 616520 R 243164 CDS YP_181411.1 57234569 3230037 complement(617410..618192) 1 NC_002936.3 identified by similarity to GP:20467243; match to protein family HMM PF00991; carbon monoxide dehydrogenase nickel-insertion accessory protein 618192 acsF-1 3230037 acsF-1 Dehalococcoides ethenogenes 195 carbon monoxide dehydrogenase nickel-insertion accessory protein YP_181411.1 617410 R 243164 CDS YP_181412.1 57234568 3230036 complement(618189..620111) 1 NC_002936.3 iron-sulfur cluster binding protein 620111 3230036 DET0670 Dehalococcoides ethenogenes 195 iron-sulfur cluster binding protein YP_181412.1 618189 R 243164 CDS YP_181413.1 57234559 3230027 complement(620149..621942) 1 NC_002936.3 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 621942 fhs-1 3230027 fhs-1 Dehalococcoides ethenogenes 195 formate--tetrahydrofolate ligase YP_181413.1 620149 R 243164 CDS YP_181414.1 57234558 3230026 622072..622653 1 NC_002936.3 hypothetical protein 622653 3230026 DET0672 Dehalococcoides ethenogenes 195 hypothetical protein YP_181414.1 622072 D 243164 CDS YP_181415.1 57234557 3230025 622772..622951 1 NC_002936.3 hypothetical protein 622951 3230025 DET0673 Dehalococcoides ethenogenes 195 hypothetical protein YP_181415.1 622772 D 243164 CDS YP_181416.1 57234556 3230024 623028..623918 1 NC_002936.3 universal stress protein 623918 3230024 DET0674 Dehalococcoides ethenogenes 195 universal stress protein YP_181416.1 623028 D 243164 CDS YP_181417.1 57234555 3230023 623972..624598 1 NC_002936.3 identified by match to protein family HMM PF04199; cyclase 624598 3230023 DET0675 Dehalococcoides ethenogenes 195 cyclase YP_181417.1 623972 D 243164 CDS YP_181418.1 57234554 3230022 624603..625265 1 NC_002936.3 ribulose-phosphate 3-epimerase 625265 3230022 DET0676 Dehalococcoides ethenogenes 195 ribulose-phosphate 3-epimerase YP_181418.1 624603 D 243164 CDS YP_181419.1 57234553 3230021 complement(625262..625720) 1 NC_002936.3 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 625720 3230021 DET0677 Dehalococcoides ethenogenes 195 ribose-5-phosphate isomerase B YP_181419.1 625262 R 243164 CDS YP_181420.1 57234552 3230020 complement(625713..627713) 1 NC_002936.3 identified by match to protein family HMM TIGR00232; transketolase 627713 tkt-2 3230020 tkt-2 Dehalococcoides ethenogenes 195 transketolase YP_181420.1 625713 R 243164 CDS YP_181421.1 57234542 3230010 complement(627758..628273) 1 NC_002936.3 identified by similarity to OMNI:NTL01CA1531; nitroreductase 628273 3230010 DET0679 Dehalococcoides ethenogenes 195 nitroreductase YP_181421.1 627758 R 243164 CDS YP_181422.1 57234541 3230009 628400..629242 1 NC_002936.3 identified by similarity to OMNI:NTL02MA4536; hypothetical protein 629242 3230009 DET0680 Dehalococcoides ethenogenes 195 hypothetical protein YP_181422.1 628400 D 243164 CDS YP_181423.1 57234540 3230008 629337..629504 1 NC_002936.3 hypothetical protein 629504 3230008 DET0681 Dehalococcoides ethenogenes 195 hypothetical protein YP_181423.1 629337 D 243164 CDS YP_181424.1 57234539 3230007 629594..630010 1 NC_002936.3 identified by similarity to OMNI:NTL04PA0672; hypothetical protein 630010 3230007 DET0682 Dehalococcoides ethenogenes 195 hypothetical protein YP_181424.1 629594 D 243164 CDS YP_181425.1 57234538 3230006 complement(630295..630474) 1 NC_002936.3 hypothetical protein 630474 3230006 DET0683 Dehalococcoides ethenogenes 195 hypothetical protein YP_181425.1 630295 R 243164 CDS YP_181426.1 57234537 3230005 630619..631635 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0342; ABC-type cobalamin/Fe3+-siderophores transport system, periplasmic binding protein 631635 3230005 DET0684 Dehalococcoides ethenogenes 195 ABC-type cobalamin/Fe3+-siderophores transport system, periplasmic binding protein YP_181426.1 630619 D 243164 CDS YP_181427.1 57234536 3230004 631774..632778 1 NC_002936.3 identified by similarity to PIR:S54438; ABC-type cobalamin/Fe3+-siderophores transport systems, permease component 632778 3230004 DET0685 Dehalococcoides ethenogenes 195 ABC-type cobalamin/Fe3+-siderophores transport systems, permease component YP_181427.1 631774 D 243164 CDS YP_181428.1 57234527 3229995 632790..633614 1 NC_002936.3 identified by similarity to SP:P23878; ABC-type cobalamin/Fe3+-siderophores transport system, ATP-binding protein 633614 3229995 DET0686 Dehalococcoides ethenogenes 195 ABC-type cobalamin/Fe3+-siderophores transport system, ATP-binding protein YP_181428.1 632790 D 243164 CDS YP_181429.1 57234526 3229994 633604..634374 1 NC_002936.3 identified by similarity to OMNI:MJ1613; hypothetical protein 634374 3229994 DET0687 Dehalococcoides ethenogenes 195 hypothetical protein YP_181429.1 633604 D 243164 CDS YP_181430.1 57234525 3229993 634376..635302 1 NC_002936.3 identified by match to protein family HMM TIGR00380; cobalamin biosynthesis protein CobD 635302 cobD-3 3229993 cobD-3 Dehalococcoides ethenogenes 195 cobalamin biosynthesis protein CobD YP_181430.1 634376 D 243164 CDS YP_181431.1 57234524 3229992 635286..636392 1 NC_002936.3 identified by similarity to SP:P17731; histidinol-phosphate aminotransferase 636392 3229992 DET0689 Dehalococcoides ethenogenes 195 histidinol-phosphate aminotransferase YP_181431.1 635286 D 243164 CDS YP_181432.1 57234523 3229991 complement(636525..636734) 1 NC_002936.3 hypothetical protein 636734 3229991 DET0690 Dehalococcoides ethenogenes 195 hypothetical protein YP_181432.1 636525 R 243164 CDS YP_181433.1 57234522 3229990 636762..637820 1 NC_002936.3 identified by similarity to SP:P36562; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 637820 cobT-2 3229990 cobT-2 Dehalococcoides ethenogenes 195 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_181433.1 636762 D 243164 CDS YP_181434.1 57234514 3229982 637858..638622 1 NC_002936.3 identified by similarity to SP:P36561; match to protein family HMM TIGR00317; cobalamin 5'-phosphate synthase 638622 cobS-2 3229982 cobS-2 Dehalococcoides ethenogenes 195 cobalamin 5'-phosphate synthase YP_181434.1 637858 D 243164 CDS YP_181435.1 57234513 3229981 638642..639244 1 NC_002936.3 identified by similarity to SP:P52086; alpha-ribazole-5'-phosphate phosphatase 639244 3229981 DET0693 Dehalococcoides ethenogenes 195 alpha-ribazole-5'-phosphate phosphatase YP_181435.1 638642 D 243164 CDS YP_181436.1 57234512 3229980 639298..639864 1 NC_002936.3 identified by similarity to SP:P46886; cobinamide kinase/cobinamide phosphate guanylyltransferase 639864 cobU-2 3229980 cobU-2 Dehalococcoides ethenogenes 195 cobinamide kinase/cobinamide phosphate guanylyltransferase YP_181436.1 639298 D 243164 CDS YP_181437.1 57234511 3229979 complement(639942..640265) 1 NC_002936.3 identified by similarity to SP:P06544; match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 640265 trx-2 3229979 trx-2 Dehalococcoides ethenogenes 195 thioredoxin YP_181437.1 639942 R 243164 CDS YP_181438.1 57234510 3229977 complement(641519..642193) 1 NC_002936.3 identified by similarity to SP:P55184; LuxR family DNA-binding response regulator 642193 3229977 DET0697 Dehalococcoides ethenogenes 195 LuxR family DNA-binding response regulator YP_181438.1 641519 R 243164 CDS YP_181439.1 57234509 3229976 complement(642264..642908) 1 NC_002936.3 hypothetical protein 642908 3229976 DET0698 Dehalococcoides ethenogenes 195 hypothetical protein YP_181439.1 642264 R 243164 CDS YP_181440.1 57234500 3229967 complement(642927..644273) 1 NC_002936.3 part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit gamma 644273 acsC-2 3229967 acsC-2 Dehalococcoides ethenogenes 195 acetyl-CoA decarbonylase/synthase complex subunit gamma YP_181440.1 642927 R 243164 CDS YP_181441.1 57234499 3229966 complement(644294..646495) 1 NC_002936.3 in acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta 646495 3229966 DET0700 Dehalococcoides ethenogenes 195 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta YP_181441.1 644294 R 243164 CDS YP_181442.1 57234498 3229965 complement(646555..647496) 1 NC_002936.3 part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit delta 647496 acsD-2 3229965 acsD-2 Dehalococcoides ethenogenes 195 acetyl-CoA decarbonylase/synthase complex subunit delta YP_181442.1 646555 R 243164 CDS YP_181443.1 57234497 3229964 complement(647532..648422) 1 NC_002936.3 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 648422 folD-2 3229964 folD-2 Dehalococcoides ethenogenes 195 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_181443.1 647532 R 243164 CDS YP_181444.1 57234496 3229963 complement(648422..649204) 1 NC_002936.3 identified by similarity to GP:20467243; match to protein family HMM PF00991; carbon monoxide dehydrogenase nickel-insertion accessory protein 649204 acsF-2 3229963 acsF-2 Dehalococcoides ethenogenes 195 carbon monoxide dehydrogenase nickel-insertion accessory protein YP_181444.1 648422 R 243164 CDS YP_181445.1 57234495 3229962 complement(649201..651123) 1 NC_002936.3 identified by match to protein family HMM PF00111; iron-sulfur cluster binding protein 651123 3229962 DET0704 Dehalococcoides ethenogenes 195 iron-sulfur cluster binding protein YP_181445.1 649201 R 243164 CDS YP_181446.1 57234487 3229954 complement(651161..652954) 1 NC_002936.3 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 652954 fhs-2 3229954 fhs-2 Dehalococcoides ethenogenes 195 formate--tetrahydrofolate ligase YP_181446.1 651161 R 243164 CDS YP_181447.1 57234486 3229953 653084..653665 1 NC_002936.3 hypothetical protein 653665 3229953 DET0706 Dehalococcoides ethenogenes 195 hypothetical protein YP_181447.1 653084 D 243164 CDS YP_181448.1 57234485 3229952 653784..653963 1 NC_002936.3 hypothetical protein 653963 3229952 DET0707 Dehalococcoides ethenogenes 195 hypothetical protein YP_181448.1 653784 D 243164 CDS YP_181449.1 57234484 3229951 654040..655836 1 NC_002936.3 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 655836 aspS 3229951 aspS Dehalococcoides ethenogenes 195 aspartyl-tRNA synthetase YP_181449.1 654040 D 243164 CDS YP_181450.1 57234483 3229950 655856..657202 1 NC_002936.3 identified by similarity to SP:P80698; match to protein family HMM PF00254; match to protein family HMM TIGR00115; trigger factor 657202 tig 3229950 tig Dehalococcoides ethenogenes 195 trigger factor YP_181450.1 655856 D 243164 CDS YP_181451.1 57234482 3229949 657199..657801 1 NC_002936.3 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 657801 clpP 3229949 clpP Dehalococcoides ethenogenes 195 ATP-dependent Clp protease proteolytic subunit YP_181451.1 657199 D 243164 CDS YP_181452.1 57234481 3229948 complement(657884..658870) 1 NC_002936.3 carbohydrate kinase 658870 3229948 DET0711 Dehalococcoides ethenogenes 195 carbohydrate kinase YP_181452.1 657884 R 243164 CDS YP_181453.1 57234480 3229947 complement(658872..659693) 1 NC_002936.3 identified by similarity to SP:P08179; phosphoribosylglycinamide transformylase 659693 3229947 DET0712 Dehalococcoides ethenogenes 195 phosphoribosylglycinamide transformylase YP_181453.1 658872 R 243164 CDS YP_181454.1 57234471 3229938 complement(659696..660355) 1 NC_002936.3 identified by match to protein family HMM PF02811; phosphotransferase domain-containing protein 660355 3229938 DET0713 Dehalococcoides ethenogenes 195 phosphotransferase domain-containing protein YP_181454.1 659696 R 243164 CDS YP_181455.1 57234470 3229937 complement(660358..660918) 1 NC_002936.3 translation elongation factor P 660918 efp-1 3229937 efp-1 Dehalococcoides ethenogenes 195 translation elongation factor P YP_181455.1 660358 R 243164 CDS YP_181456.1 57234469 3229936 complement(660934..662022) 1 NC_002936.3 identified by similarity to SP:P76524; similarity to GP:1915907; M24 family metallopeptidase 662022 3229936 DET0715 Dehalococcoides ethenogenes 195 M24 family metallopeptidase YP_181456.1 660934 R 243164 CDS YP_181457.1 57234468 3229935 complement(662019..662942) 1 NC_002936.3 tyrosine recombinase XerC 662942 xerC 3229935 xerC Dehalococcoides ethenogenes 195 tyrosine recombinase XerC YP_181457.1 662019 R 243164 CDS YP_181458.1 57234467 3229934 complement(662943..665054) 1 NC_002936.3 identified by similarity to SP:P39814; match to protein family HMM PF01131; match to protein family HMM TIGR01051; DNA topoisomerase I 665054 topA 3229934 topA Dehalococcoides ethenogenes 195 DNA topoisomerase I YP_181458.1 662943 R 243164 CDS YP_181459.1 57234466 3229933 complement(665061..666281) 1 NC_002936.3 identified by match to protein family HMM TIGR00732; DNA processing protein DprA 666281 3229933 DET0718 Dehalococcoides ethenogenes 195 DNA processing protein DprA YP_181459.1 665061 R 243164 CDS YP_181460.1 57234465 3229932 666697..666828 1 NC_002936.3 hypothetical protein 666828 3229932 DET0721 Dehalococcoides ethenogenes 195 hypothetical protein YP_181460.1 666697 D 243164 CDS YP_181461.1 57234518 3229986 666888..668171 1 NC_002936.3 identified by similarity to SP:P26235; sodium/hydrogen exchanger family protein 668171 3229986 DET0722 Dehalococcoides ethenogenes 195 sodium/hydrogen exchanger family protein YP_181461.1 666888 D 243164 CDS YP_181462.1 57234517 3229985 668313..668885 1 NC_002936.3 identified by similarity to SP:Q51799; pyruvic-ferredoxin oxidoreductase, gamma subunit 668885 porG 3229985 porG Dehalococcoides ethenogenes 195 pyruvic-ferredoxin oxidoreductase, gamma subunit YP_181462.1 668313 D 243164 CDS YP_181463.1 57234516 3229984 668914..669174 1 NC_002936.3 identified by similarity to SP:Q51803; pyruvic-ferredoxin oxidoreductase, delta subunit 669174 porD 3229984 porD Dehalococcoides ethenogenes 195 pyruvic-ferredoxin oxidoreductase, delta subunit YP_181463.1 668914 D 243164 CDS YP_181464.1 57234515 3229983 669174..670346 1 NC_002936.3 identified by similarity to SP:Q51804; pyruvic-ferredoxin oxidoreductase, alpha subunit 670346 porA 3229983 porA Dehalococcoides ethenogenes 195 pyruvic-ferredoxin oxidoreductase, alpha subunit YP_181464.1 669174 D 243164 CDS YP_181465.1 57234508 3229975 670346..671287 1 NC_002936.3 identified by similarity to SP:Q51805; pyruvic-ferredoxin oxidoreductase, beta subunit 671287 porB 3229975 porB Dehalococcoides ethenogenes 195 pyruvic-ferredoxin oxidoreductase, beta subunit YP_181465.1 670346 D 243164 CDS YP_181466.1 57234507 3229974 671263..671742 1 NC_002936.3 identified by similarity to GP:14250933; [Fe] hydrogenase, HymA subunit 671742 3229974 DET0728 Dehalococcoides ethenogenes 195 [Fe] hydrogenase, HymA subunit YP_181466.1 671263 D 243164 CDS YP_181467.1 57234506 3229973 671735..673606 1 NC_002936.3 identified by similarity to GP:14250934; [Fe] hydrogenase, HymB subunit 673606 3229973 DET0729 Dehalococcoides ethenogenes 195 [Fe] hydrogenase, HymB subunit YP_181467.1 671735 D 243164 CDS YP_181468.1 57234505 3229972 673619..674287 1 NC_002936.3 identified by similarity to GP:1032477; [Fe] hydrogenase, HymC subunit 674287 3229972 DET0730 Dehalococcoides ethenogenes 195 [Fe] hydrogenase, HymC subunit YP_181468.1 673619 D 243164 CDS YP_181469.1 57234504 3229971 674884..676353 1 NC_002936.3 identified by similarity to SP:P16171; match to protein family HMM PF02852; mercuric reductase 676353 3229971 DET0732 Dehalococcoides ethenogenes 195 mercuric reductase YP_181469.1 674884 D 243164 CDS YP_181470.1 57234503 3229970 676613..676999 1 NC_002936.3 identified by similarity to SP:Q50229; hypothetical protein 676999 3229970 DET0734 Dehalococcoides ethenogenes 195 hypothetical protein YP_181470.1 676613 D 243164 CDS YP_181471.1 57234502 3229969 complement(677162..677956) 1 NC_002936.3 identified by similarity to SP:P37769; short chain dehydrogenase/reductase oxidoreductase 677956 3229969 DET0736 Dehalococcoides ethenogenes 195 short chain dehydrogenase/reductase oxidoreductase YP_181471.1 677162 R 243164 CDS YP_181472.1 57234501 3229968 678172..679314 1 NC_002936.3 identified by similarity to SP:P25519; GTP-binding protein 679314 3229968 DET0737 Dehalococcoides ethenogenes 195 GTP-binding protein YP_181472.1 678172 D 243164 CDS YP_181473.1 57234494 3229961 679324..679527 1 NC_002936.3 hypothetical protein 679527 3229961 DET0738 Dehalococcoides ethenogenes 195 hypothetical protein YP_181473.1 679324 D 243164 CDS YP_181474.1 57234493 3229960 complement(680145..681311) 1 NC_002936.3 catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis; LL-diaminopimelate aminotransferase 681311 3229960 DET0739 Dehalococcoides ethenogenes 195 LL-diaminopimelate aminotransferase YP_181474.1 680145 R 243164 CDS YP_181475.1 57234492 3229959 complement(681298..682152) 1 NC_002936.3 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 682152 dapF 3229959 dapF Dehalococcoides ethenogenes 195 diaminopimelate epimerase YP_181475.1 681298 R 243164 CDS YP_181476.1 57234491 3229958 complement(682149..683126) 1 NC_002936.3 identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA delta(2)-isopentenylpyrophosphate transferase 683126 miaA 3229958 miaA Dehalococcoides ethenogenes 195 tRNA delta(2)-isopentenylpyrophosphate transferase YP_181476.1 682149 R 243164 CDS YP_181477.1 57234490 3229957 complement(683187..683942) 1 NC_002936.3 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 683942 tpiA 3229957 tpiA Dehalococcoides ethenogenes 195 triosephosphate isomerase YP_181477.1 683187 R 243164 CDS YP_181478.1 57234489 3229956 complement(683954..685141) 1 NC_002936.3 catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 685141 3229956 DET0743 Dehalococcoides ethenogenes 195 cofactor-independent phosphoglycerate mutase YP_181478.1 683954 R 243164 CDS YP_181479.1 57234488 3229955 complement(685152..686345) 1 NC_002936.3 identified by similarity to SP:P40924; match to protein family HMM PF00162; phosphoglycerate kinase 686345 pgk 3229955 pgk Dehalococcoides ethenogenes 195 phosphoglycerate kinase YP_181479.1 685152 R 243164 CDS YP_181480.1 57234479 3229946 complement(686446..688389) 1 NC_002936.3 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 688389 dxs 3229946 dxs Dehalococcoides ethenogenes 195 1-deoxy-D-xylulose-5-phosphate synthase YP_181480.1 686446 R 243164 CDS YP_181481.1 57234478 3229945 688537..689070 1 NC_002936.3 identified by similarity to OMNI:SAG1830; hypothetical protein 689070 3229945 DET0746 Dehalococcoides ethenogenes 195 hypothetical protein YP_181481.1 688537 D 243164 CDS YP_181482.1 57234477 3229944 689291..689479 1 NC_002936.3 hypothetical protein 689479 3229944 DET0748 Dehalococcoides ethenogenes 195 hypothetical protein YP_181482.1 689291 D 243164 CDS YP_181483.1 57234476 3229943 complement(689569..690093) 1 NC_002936.3 identified by similarity to SP:P37472; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 690093 hpt-1 3229943 hpt-1 Dehalococcoides ethenogenes 195 hypoxanthine phosphoribosyltransferase YP_181483.1 689569 R 243164 CDS YP_181484.1 57234475 3229942 complement(691099..691458) 1 NC_002936.3 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 691458 rplT 3229942 rplT Dehalococcoides ethenogenes 195 50S ribosomal protein L20 YP_181484.1 691099 R 243164 CDS YP_181485.1 57234474 3229941 complement(691477..691680) 1 NC_002936.3 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 691680 rpmI 3229941 rpmI Dehalococcoides ethenogenes 195 50S ribosomal protein L35 YP_181485.1 691477 R 243164 CDS YP_181486.1 57234473 3229940 complement(691673..692179) 1 NC_002936.3 identified by similarity to SP:O53084; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 692179 infC 3229940 infC Dehalococcoides ethenogenes 195 translation initiation factor IF-3 YP_181486.1 691673 R 243164 CDS YP_181487.1 57234472 3229939 complement(692297..694045) 1 NC_002936.3 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 694045 thrS 3229939 thrS Dehalococcoides ethenogenes 195 threonyl-tRNA synthetase YP_181487.1 692297 R 243164 CDS YP_181488.1 57234463 3229930 complement(694172..696703) 1 NC_002936.3 hypothetical protein 696703 3229930 DET0754 Dehalococcoides ethenogenes 195 hypothetical protein YP_181488.1 694172 R 243164 CDS YP_181489.1 57234462 3229929 complement(696844..698250) 1 NC_002936.3 hypothetical protein 698250 3229929 DET0755 Dehalococcoides ethenogenes 195 hypothetical protein YP_181489.1 696844 R 243164 CDS YP_181490.1 57234461 3229928 698843..699211 1 NC_002936.3 identified by similarity to OMNI:NTL03CP0415; hypothetical protein 699211 3229928 DET0757 Dehalococcoides ethenogenes 195 hypothetical protein YP_181490.1 698843 D 243164 CDS YP_181491.1 57234460 3229927 699222..699884 1 NC_002936.3 identified by match to protein family HMM TIGR00044; hypothetical protein 699884 3229927 DET0758 Dehalococcoides ethenogenes 195 hypothetical protein YP_181491.1 699222 D 243164 CDS YP_181492.1 57234459 3229926 complement(699881..700540) 1 NC_002936.3 identified by match to protein family HMM TIGR01488; match to protein family HMM TIGR01489; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 700540 3229926 DET0759 Dehalococcoides ethenogenes 195 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_181492.1 699881 R 243164 CDS YP_181493.1 57234458 3229925 complement(700563..701066) 1 NC_002936.3 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 701066 def 3229925 def Dehalococcoides ethenogenes 195 peptide deformylase YP_181493.1 700563 R 243164 CDS YP_181494.1 57234457 3229924 complement(701352..702155) 1 NC_002936.3 hypothetical protein 702155 3229924 DET0762 Dehalococcoides ethenogenes 195 hypothetical protein YP_181494.1 701352 R 243164 CDS YP_181495.1 57234456 3229923 complement(702208..702609) 1 NC_002936.3 hypothetical protein 702609 3229923 DET0763 Dehalococcoides ethenogenes 195 hypothetical protein YP_181495.1 702208 R 243164 CDS YP_181496.1 57234447 3229914 complement(702619..703278) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM1779; hypothetical protein 703278 3229914 DET0764 Dehalococcoides ethenogenes 195 hypothetical protein YP_181496.1 702619 R 243164 CDS YP_181497.1 57234446 3229913 703491..703655 1 NC_002936.3 hypothetical protein 703655 3229913 DET0765 Dehalococcoides ethenogenes 195 hypothetical protein YP_181497.1 703491 D 243164 CDS YP_181498.1 57234445 3229912 complement(703728..705854) 1 NC_002936.3 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 705854 hppA 3229912 hppA Dehalococcoides ethenogenes 195 membrane-bound proton-translocating pyrophosphatase YP_181498.1 703728 R 243164 CDS YP_181499.1 57234444 3229911 706040..706270 1 NC_002936.3 identified by similarity to SP:P20603; ATPase, C subunit family protein 706270 3229911 DET0767 Dehalococcoides ethenogenes 195 ATPase, C subunit family protein YP_181499.1 706040 D 243164 CDS YP_181500.1 57234443 3229910 complement(706346..706675) 1 NC_002936.3 identified by similarity to OMNI:NTL01PF1439; match to protein family HMM PF03675; hypothetical protein 706675 3229910 DET0768 Dehalococcoides ethenogenes 195 hypothetical protein YP_181500.1 706346 R 243164 CDS YP_181501.1 57234442 3229909 complement(706749..707891) 1 NC_002936.3 protease 707891 3229909 DET0769 Dehalococcoides ethenogenes 195 protease YP_181501.1 706749 R 243164 CDS YP_181502.1 57234441 3229908 complement(707921..708391) 1 NC_002936.3 identified by similarity to SP:P80240; match to protein family HMM PF01272; match to protein family HMM PF03449; transcription elongation factor GreA 708391 greA 3229908 greA Dehalococcoides ethenogenes 195 transcription elongation factor GreA YP_181502.1 707921 R 243164 CDS YP_181503.1 57234440 3229907 complement(708749..709888) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM3299; hypothetical protein 709888 3229907 DET0771 Dehalococcoides ethenogenes 195 hypothetical protein YP_181503.1 708749 R 243164 CDS YP_181504.1 57234432 3229899 710019..710255 1 NC_002936.3 hypothetical protein 710255 3229899 DET0772 Dehalococcoides ethenogenes 195 hypothetical protein YP_181504.1 710019 D 243164 CDS YP_181505.1 57234431 3229898 complement(710244..710984) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM1149; CAAX amino terminal protease 710984 3229898 DET0773 Dehalococcoides ethenogenes 195 CAAX amino terminal protease YP_181505.1 710244 R 243164 CDS YP_181506.1 57234430 3229897 complement(710977..712089) 1 NC_002936.3 M50 family metallopeptidase 712089 3229897 DET0774 Dehalococcoides ethenogenes 195 M50 family metallopeptidase YP_181506.1 710977 R 243164 CDS YP_181507.1 57234429 3229896 complement(712126..713421) 1 NC_002936.3 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 713421 thiC 3229896 thiC Dehalococcoides ethenogenes 195 thiamine biosynthesis protein ThiC YP_181507.1 712126 R 243164 CDS YP_181508.1 57234428 3229895 713595..714356 1 NC_002936.3 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 714356 gidB 3229895 gidB Dehalococcoides ethenogenes 195 16S rRNA methyltransferase GidB YP_181508.1 713595 D 243164 CDS YP_181509.1 57234427 3229894 714569..716098 1 NC_002936.3 R3H domain-containing protein 716098 3229894 DET0777 Dehalococcoides ethenogenes 195 R3H domain-containing protein YP_181509.1 714569 D 243164 CDS YP_181510.1 57234426 3229893 716102..716725 1 NC_002936.3 identified by similarity to SP:P37537; match to protein family HMM TIGR00041; thymidylate kinase 716725 tmk 3229893 tmk Dehalococcoides ethenogenes 195 thymidylate kinase YP_181510.1 716102 D 243164 CDS YP_181511.1 57234425 3229892 716722..717795 1 NC_002936.3 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 717795 mnmA 3229892 mnmA Dehalococcoides ethenogenes 195 tRNA-specific 2-thiouridylase MnmA YP_181511.1 716722 D 243164 CDS YP_181512.1 57234417 3229884 717797..718432 1 NC_002936.3 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 718432 rnhB 3229884 rnhB Dehalococcoides ethenogenes 195 ribonuclease HII YP_181512.1 717797 D 243164 CDS YP_181513.1 57234416 3229883 718422..718787 1 NC_002936.3 identified by similarity to SP:Q9HVZ1; match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 718787 3229883 DET0781 Dehalococcoides ethenogenes 195 hypothetical protein YP_181513.1 718422 D 243164 CDS YP_181514.1 57234415 3229882 718823..719881 1 NC_002936.3 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 719881 3229882 DET0782 Dehalococcoides ethenogenes 195 thiamine-phosphate pyrophosphorylase YP_181514.1 718823 D 243164 CDS YP_181515.1 57234414 3229881 719895..720527 1 NC_002936.3 identified by similarity to OMNI:NTL02MA0091; match to protein family HMM PF01997; haloacid dehalogenase superfamily protein 720527 3229881 DET0783 Dehalococcoides ethenogenes 195 haloacid dehalogenase superfamily protein YP_181515.1 719895 D 243164 CDS YP_181516.1 57234413 3229880 720532..722571 1 NC_002936.3 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 722571 hppA 3229880 hppA Dehalococcoides ethenogenes 195 membrane-bound proton-translocating pyrophosphatase YP_181516.1 720532 D 243164 CDS YP_181517.1 57234412 3229879 complement(722584..723201) 1 NC_002936.3 metallo-beta-lactamase 723201 3229879 DET0785 Dehalococcoides ethenogenes 195 metallo-beta-lactamase YP_181517.1 722584 R 243164 CDS YP_181518.1 57234411 3229878 723272..723853 1 NC_002936.3 hypothetical protein 723853 3229878 DET0786 Dehalococcoides ethenogenes 195 hypothetical protein YP_181518.1 723272 D 243164 CDS YP_181519.1 57234403 3229870 723890..725191 1 NC_002936.3 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 725191 glyS 3229870 glyS Dehalococcoides ethenogenes 195 glycyl-tRNA synthetase YP_181519.1 723890 D 243164 CDS YP_181520.1 57234402 3229869 725205..726452 1 NC_002936.3 identified by match to protein family HMM TIGR00619; nuclease SbcCD, D subunit 726452 sbcD 3229869 sbcD Dehalococcoides ethenogenes 195 nuclease SbcCD, D subunit YP_181520.1 725205 D 243164 CDS YP_181521.1 57234401 3229868 726474..727223 1 NC_002936.3 identified by similarity to SP:Q55578; match to protein family HMM PF00849; match to protein family HMM TIGR00093; RsuA family pseudouridine synthase 727223 3229868 DET0789 Dehalococcoides ethenogenes 195 RsuA family pseudouridine synthase YP_181521.1 726474 D 243164 CDS YP_181522.1 57234400 3229867 complement(727216..727950) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA2606; phosphoribosyl transferase domain-containing protein 727950 3229867 DET0790 Dehalococcoides ethenogenes 195 phosphoribosyl transferase domain-containing protein YP_181522.1 727216 R 243164 CDS YP_181523.1 57234399 3229866 complement(727950..729665) 1 NC_002936.3 identified by similarity to SP:P39761; match to protein family HMM TIGR01178; adenine deaminase 729665 ade 3229866 ade Dehalococcoides ethenogenes 195 adenine deaminase YP_181523.1 727950 R 243164 CDS YP_181524.1 57234398 3229865 complement(729649..730194) 1 NC_002936.3 identified by similarity to SP:P37472; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 730194 hpt-2 3229865 hpt-2 Dehalococcoides ethenogenes 195 hypoxanthine phosphoribosyltransferase YP_181524.1 729649 R 243164 CDS YP_181525.1 57234397 3229864 730338..731141 1 NC_002936.3 hypothetical protein 731141 3229864 DET0793 Dehalococcoides ethenogenes 195 hypothetical protein YP_181525.1 730338 D 243164 CDS YP_181526.1 57234396 3229863 731239..732156 1 NC_002936.3 identified by similarity to OMNI:TM0389; ABC transporter ATP-binding protein 732156 3229863 DET0794 Dehalococcoides ethenogenes 195 ABC transporter ATP-binding protein YP_181526.1 731239 D 243164 CDS YP_181527.1 57234387 3229854 732216..733235 1 NC_002936.3 identified by similarity to SP:P75774; ABC transporter permease 733235 3229854 DET0795 Dehalococcoides ethenogenes 195 ABC transporter permease YP_181527.1 732216 D 243164 CDS YP_181528.1 57234386 3229853 complement(733316..734347) 1 NC_002936.3 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 734347 queA 3229853 queA Dehalococcoides ethenogenes 195 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_181528.1 733316 R 243164 CDS YP_181529.1 57234385 3229852 734509..735306 1 NC_002936.3 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 735306 surE 3229852 surE Dehalococcoides ethenogenes 195 stationary phase survival protein SurE YP_181529.1 734509 D 243164 CDS YP_181530.1 57234384 3229851 complement(735303..735410) 1 NC_002936.3 hypothetical protein 735410 3229851 DET0798 Dehalococcoides ethenogenes 195 hypothetical protein YP_181530.1 735303 R 243164 CDS YP_181531.1 57234383 3229850 complement(735412..735594) 1 NC_002936.3 hypothetical protein 735594 3229850 DET0799 Dehalococcoides ethenogenes 195 hypothetical protein YP_181531.1 735412 R 243164 CDS YP_181532.1 57234382 3229849 735677..736009 1 NC_002936.3 hypothetical protein 736009 3229849 DET0800 Dehalococcoides ethenogenes 195 hypothetical protein YP_181532.1 735677 D 243164 CDS YP_181533.1 57234381 3229848 736180..737037 1 NC_002936.3 pyrroline-5-carboxylate reductase 737037 3229848 DET0801 Dehalococcoides ethenogenes 195 pyrroline-5-carboxylate reductase YP_181533.1 736180 D 243164 CDS YP_181534.1 57234380 3229847 737060..737434 1 NC_002936.3 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 737434 panD 3229847 panD Dehalococcoides ethenogenes 195 aspartate alpha-decarboxylase YP_181534.1 737060 D 243164 CDS YP_181535.1 57234371 3229838 737580..738287 1 NC_002936.3 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 738287 panB 3229838 panB Dehalococcoides ethenogenes 195 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_181535.1 737580 D 243164 CDS YP_181536.1 57234370 3229837 738293..739099 1 NC_002936.3 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 739099 panC 3229837 panC Dehalococcoides ethenogenes 195 pantoate--beta-alanine ligase YP_181536.1 738293 D 243164 CDS YP_181537.1 57234369 3229836 complement(739096..740349) 1 NC_002936.3 identified by similarity to OMNI:CT0198; major facilitator family transporter 740349 3229836 DET0805 Dehalococcoides ethenogenes 195 major facilitator family transporter YP_181537.1 739096 R 243164 CDS YP_181538.1 57234368 3229835 complement(740456..740650) 1 NC_002936.3 hypothetical protein 740650 3229835 DET0806 Dehalococcoides ethenogenes 195 hypothetical protein YP_181538.1 740456 R 243164 CDS YP_181539.1 57234464 3229931 741147..742718 1 NC_002936.3 phytoene dehydrogenase 742718 3229931 DET0811 Dehalococcoides ethenogenes 195 phytoene dehydrogenase YP_181539.1 741147 D 243164 CDS YP_181540.1 57234455 3229922 complement(742715..743305) 1 NC_002936.3 PAP2 family protein 743305 3229922 DET0812 Dehalococcoides ethenogenes 195 PAP2 family protein YP_181540.1 742715 R 243164 CDS YP_181541.1 57234454 3229921 743524..744270 1 NC_002936.3 identified by similarity to OMNI:NTL01LI0916; ABC transporter ATP-binding protein 744270 3229921 DET0813 Dehalococcoides ethenogenes 195 ABC transporter ATP-binding protein YP_181541.1 743524 D 243164 CDS YP_181542.1 57234453 3229920 744263..744988 1 NC_002936.3 identified by similarity to OMNI:NTL01CG1421; ABC transporter permease 744988 3229920 DET0814 Dehalococcoides ethenogenes 195 ABC transporter permease YP_181542.1 744263 D 243164 CDS YP_181543.1 57234452 3229919 745089..745844 1 NC_002936.3 FeS assembly ATPase SufC 745844 3229919 DET0815 Dehalococcoides ethenogenes 195 FeS assembly ATPase SufC YP_181543.1 745089 D 243164 CDS YP_181544.1 57234451 3229918 745826..747061 1 NC_002936.3 identified by match to protein family HMM PF01458; sufB/SufD domain-containing protein 747061 3229918 DET0816 Dehalococcoides ethenogenes 195 sufB/SufD domain-containing protein YP_181544.1 745826 D 243164 CDS YP_181545.1 57234450 3229917 complement(747131..747922) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA3577; ABC transporter ATP-binding protein 747922 3229917 DET0817 Dehalococcoides ethenogenes 195 ABC transporter ATP-binding protein YP_181545.1 747131 R 243164 CDS YP_181546.1 57234449 3229916 complement(748199..748852) 1 NC_002936.3 identified by similarity to SP:P80305; thymidylate synthase 748852 3229916 DET0819 Dehalococcoides ethenogenes 195 thymidylate synthase YP_181546.1 748199 R 243164 CDS YP_181547.1 57234448 3229915 complement(748864..749568) 1 NC_002936.3 hypothetical protein 749568 3229915 DET0820 Dehalococcoides ethenogenes 195 hypothetical protein YP_181547.1 748864 R 243164 CDS YP_181548.1 57234439 3229906 complement(749578..750168) 1 NC_002936.3 identified by similarity to SP:P21884; hypothetical protein 750168 3229906 DET0821 Dehalococcoides ethenogenes 195 hypothetical protein YP_181548.1 749578 R 243164 CDS YP_181549.1 57234438 3229905 750271..750687 1 NC_002936.3 identified by similarity to SP:Q9UX79; match to protein family HMM PF01951; hypothetical protein 750687 3229905 DET0822 Dehalococcoides ethenogenes 195 hypothetical protein YP_181549.1 750271 D 243164 CDS YP_181550.1 57234437 3229904 750697..752157 1 NC_002936.3 identified by similarity to OMNI:AF0862; match to protein family HMM PF01139; hypothetical protein 752157 3229904 DET0823 Dehalococcoides ethenogenes 195 hypothetical protein YP_181550.1 750697 D 243164 CDS YP_181551.1 57234436 3229903 752158..752775 1 NC_002936.3 nitroreductase 752775 3229903 DET0824 Dehalococcoides ethenogenes 195 nitroreductase YP_181551.1 752158 D 243164 CDS YP_181552.1 57234435 3229902 complement(752778..754379) 1 NC_002936.3 catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; alpha-isopropylmalate/homocitrate synthase transferase 754379 3229902 DET0825 Dehalococcoides ethenogenes 195 alpha-isopropylmalate/homocitrate synthase transferase YP_181552.1 752778 R 243164 CDS YP_181553.1 57234434 3229901 complement(754386..755483) 1 NC_002936.3 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 755483 leuB 3229901 leuB Dehalococcoides ethenogenes 195 3-isopropylmalate dehydrogenase YP_181553.1 754386 R 243164 CDS YP_181554.1 57234433 3229900 complement(755484..755984) 1 NC_002936.3 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 755984 leuD 3229900 leuD Dehalococcoides ethenogenes 195 3-isopropylmalate dehydratase small subunit YP_181554.1 755484 R 243164 CDS YP_181555.1 57234424 3229891 complement(756056..757306) 1 NC_002936.3 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 757306 leuC 3229891 leuC Dehalococcoides ethenogenes 195 3-isopropylmalate dehydratase large subunit YP_181555.1 756056 R 243164 CDS YP_181556.1 57234423 3229890 complement(757327..757728) 1 NC_002936.3 MgtC/SapB family membrane protein 757728 3229890 DET0829 Dehalococcoides ethenogenes 195 MgtC/SapB family membrane protein YP_181556.1 757327 R 243164 CDS YP_181557.1 57234422 3229889 complement(757744..759261) 1 NC_002936.3 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 759261 leuA 3229889 leuA Dehalococcoides ethenogenes 195 2-isopropylmalate synthase YP_181557.1 757744 R 243164 CDS YP_181558.1 57234421 3229888 complement(759437..760435) 1 NC_002936.3 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 760435 ilvC 3229888 ilvC Dehalococcoides ethenogenes 195 ketol-acid reductoisomerase YP_181558.1 759437 R 243164 CDS YP_181559.1 57234420 3229887 complement(760454..760990) 1 NC_002936.3 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 760990 ilvH 3229887 ilvH Dehalococcoides ethenogenes 195 acetolactate synthase 3 regulatory subunit YP_181559.1 760454 R 243164 CDS YP_181560.1 57234419 3229886 complement(760966..762675) 1 NC_002936.3 identified by match to protein family HMM PF02776; match to protein family HMM TIGR00118; acetolactate synthase large subunit 762675 ilvB 3229886 ilvB Dehalococcoides ethenogenes 195 acetolactate synthase large subunit YP_181560.1 760966 R 243164 CDS YP_181561.1 57234418 3229885 complement(762697..764364) 1 NC_002936.3 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 764364 ilvD 3229885 ilvD Dehalococcoides ethenogenes 195 dihydroxy-acid dehydratase YP_181561.1 762697 R 243164 CDS YP_181562.1 57234410 3229877 complement(764466..765107) 1 NC_002936.3 identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 765107 3229877 DET0835 Dehalococcoides ethenogenes 195 Sua5/YciO/YrdC/YwlC family protein YP_181562.1 764466 R 243164 CDS YP_181563.1 57234409 3229876 765339..766940 1 NC_002936.3 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 766940 guaA 3229876 guaA Dehalococcoides ethenogenes 195 GMP synthase YP_181563.1 765339 D 243164 CDS YP_181564.1 57234408 3229875 766947..767258 1 NC_002936.3 hypothetical protein 767258 3229875 DET0837 Dehalococcoides ethenogenes 195 hypothetical protein YP_181564.1 766947 D 243164 CDS YP_181565.1 57234407 3229874 767278..768555 1 NC_002936.3 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 768555 purD 3229874 purD Dehalococcoides ethenogenes 195 phosphoribosylamine--glycine ligase YP_181565.1 767278 D 243164 CDS YP_181566.1 57234406 3229873 768546..769010 1 NC_002936.3 identified by similarity to SP:O58058; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase, catalytic subunit 769010 purE 3229873 purE Dehalococcoides ethenogenes 195 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_181566.1 768546 D 243164 CDS YP_181567.1 57234405 3229872 769007..770362 1 NC_002936.3 identified by similarity to SP:P12047; match to protein family HMM PF00206; match to protein family HMM TIGR00928; adenylosuccinate lyase 770362 purB 3229872 purB Dehalococcoides ethenogenes 195 adenylosuccinate lyase YP_181567.1 769007 D 243164 CDS YP_181568.1 57234404 3229871 770363..771277 1 NC_002936.3 identified by similarity to SP:Q59566; match to protein family HMM PF01259; match to protein family HMM TIGR00081; phosphoribosylaminoimidazole-succinocarboxamide synthase 771277 purC 3229871 purC Dehalococcoides ethenogenes 195 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_181568.1 770363 D 243164 CDS YP_181569.1 57234395 3229862 complement(771346..771936) 1 NC_002936.3 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 771936 hisB 3229862 hisB Dehalococcoides ethenogenes 195 imidazoleglycerol-phosphate dehydratase YP_181569.1 771346 R 243164 CDS YP_181570.1 57234394 3229861 complement(771938..773014) 1 NC_002936.3 identified by match to protein family HMM TIGR01141; histidinol-phosphate aminotransferase 773014 hisC 3229861 hisC Dehalococcoides ethenogenes 195 histidinol-phosphate aminotransferase YP_181570.1 771938 R 243164 CDS YP_181571.1 57234393 3229860 complement(773027..774337) 1 NC_002936.3 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 774337 hisD 3229860 hisD Dehalococcoides ethenogenes 195 histidinol dehydrogenase YP_181571.1 773027 R 243164 CDS YP_181572.1 57234392 3229859 complement(774344..775750) 1 NC_002936.3 ATP phosphoribosyltransferase, putaitve 775750 3229859 DET0845 Dehalococcoides ethenogenes 195 ATP phosphoribosyltransferase, putaitve YP_181572.1 774344 R 243164 CDS YP_181573.1 57234391 3229858 complement(775743..776981) 1 NC_002936.3 histidyl-tRNA synthetase 776981 3229858 DET0846 Dehalococcoides ethenogenes 195 histidyl-tRNA synthetase YP_181573.1 775743 R 243164 CDS YP_181574.1 57234390 3229857 777123..777413 1 NC_002936.3 identified by similarity to OMNI:NTL01PF1533; hypothetical protein 777413 3229857 DET0847 Dehalococcoides ethenogenes 195 hypothetical protein YP_181574.1 777123 D 243164 CDS YP_181575.1 57234389 3229856 777414..778217 1 NC_002936.3 identified by match to protein family HMM PF01145; SPFH domain-containing protein/band 7 family protein 778217 3229856 DET0848 Dehalococcoides ethenogenes 195 SPFH domain-containing protein/band 7 family protein YP_181575.1 777414 D 243164 CDS YP_181576.1 57234388 3229855 complement(778290..779090) 1 NC_002936.3 identified by similarity to GP:773349; match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin--acetyl-CoA-carboxylase ligase 779090 3229855 DET0849 Dehalococcoides ethenogenes 195 biotin--acetyl-CoA-carboxylase ligase YP_181576.1 778290 R 243164 CDS YP_181577.1 57234379 3229846 779169..779720 1 NC_002936.3 identified by similarity to OMNI:NTL01MM0209; hypothetical protein 779720 3229846 DET0850 Dehalococcoides ethenogenes 195 hypothetical protein YP_181577.1 779169 D 243164 CDS YP_181578.1 57234378 3229845 779756..780652 1 NC_002936.3 identified by similarity to GP:3688825; sodium extrusion protein NatA 780652 3229845 DET0851 Dehalococcoides ethenogenes 195 sodium extrusion protein NatA YP_181578.1 779756 D 243164 CDS YP_181579.1 57234377 3229844 780612..781862 1 NC_002936.3 identified by similarity to GP:3688826; sodium extrusion protein NatB 781862 3229844 DET0852 Dehalococcoides ethenogenes 195 sodium extrusion protein NatB YP_181579.1 780612 D 243164 CDS YP_181580.1 57234376 3229843 782066..782281 1 NC_002936.3 hypothetical protein 782281 3229843 DET0854 Dehalococcoides ethenogenes 195 hypothetical protein YP_181580.1 782066 D 243164 CDS YP_181581.1 57234375 3229842 782458..782673 1 NC_002936.3 hypothetical protein 782673 3229842 DET0855 Dehalococcoides ethenogenes 195 hypothetical protein YP_181581.1 782458 D 243164 CDS YP_181582.1 57234374 3229841 782828..784051 1 NC_002936.3 ABC transporter, permease 784051 3229841 DET0856 Dehalococcoides ethenogenes 195 ABC transporter, permease YP_181582.1 782828 D 243164 CDS YP_181583.1 57234373 3229840 784053..784763 1 NC_002936.3 identified by similarity to OMNI:NTL02SC5631; ABC transporter ATP-binding protein 784763 3229840 DET0857 Dehalococcoides ethenogenes 195 ABC transporter ATP-binding protein YP_181583.1 784053 D 243164 CDS YP_181584.1 57234372 3229839 784776..785912 1 NC_002936.3 identified by match to protein family HMM PF06969; match to protein family HMM TIGR00539; oxygen-independent coproporphyrinogen III oxidase 785912 3229839 DET0858 Dehalococcoides ethenogenes 195 oxygen-independent coproporphyrinogen III oxidase YP_181584.1 784776 D 243164 CDS YP_181585.1 57234362 3229829 785976..787793 1 NC_002936.3 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 787793 lepA 3229829 lepA Dehalococcoides ethenogenes 195 GTP-binding protein LepA YP_181585.1 785976 D 243164 CDS YP_181586.1 57234361 3229828 787934..789880 1 NC_002936.3 identified by similarity to GP:3005967; hydrogenase, EchA subunit 789880 3229828 DET0860 Dehalococcoides ethenogenes 195 hydrogenase, EchA subunit YP_181586.1 787934 D 243164 CDS YP_181587.1 57234360 3229827 789877..790725 1 NC_002936.3 identified by similarity to GP:3005968; hydrogenase, EchB subunit 790725 3229827 DET0861 Dehalococcoides ethenogenes 195 hydrogenase, EchB subunit YP_181587.1 789877 D 243164 CDS YP_181588.1 57234359 3229826 790726..791193 1 NC_002936.3 identified by similarity to GP:3005969; hydrogenase, group 4, EchC subunit 791193 3229826 DET0862 Dehalococcoides ethenogenes 195 hydrogenase, group 4, EchC subunit YP_181588.1 790726 D 243164 CDS YP_181589.1 57234358 3229825 791186..791671 1 NC_002936.3 identified by similarity to GP:14250933; hydrogenase subunit HymA 791671 3229825 DET0863 Dehalococcoides ethenogenes 195 hydrogenase subunit HymA YP_181589.1 791186 D 243164 CDS YP_181590.1 57234357 3229824 791685..793607 1 NC_002936.3 identified by similarity to GP:14250934; hydrogenase subunit HymB 793607 3229824 DET0864 Dehalococcoides ethenogenes 195 hydrogenase subunit HymB YP_181590.1 791685 D 243164 CDS YP_181591.1 57234356 3229823 793607..794200 1 NC_002936.3 identified by similarity to GP:1032477; hydrogenase subunit HymC 794200 3229823 DET0865 Dehalococcoides ethenogenes 195 hydrogenase subunit HymC YP_181591.1 793607 D 243164 CDS YP_181592.1 57234355 3229822 794203..795588 1 NC_002936.3 identified by similarity to SP:P76440; hydrogenase subunit 795588 3229822 DET0866 Dehalococcoides ethenogenes 195 hydrogenase subunit YP_181592.1 794203 D 243164 CDS YP_181593.1 57234354 3229821 795589..796668 1 NC_002936.3 identified by similarity to GP:3005971; hydrogenase, group 4, EchE subunit 796668 3229821 DET0867 Dehalococcoides ethenogenes 195 hydrogenase, group 4, EchE subunit YP_181593.1 795589 D 243164 CDS YP_181594.1 57234353 3229820 796678..797022 1 NC_002936.3 identified by similarity to GP:3005972; hydrogenase, EchF subunit 797022 3229820 DET0868 Dehalococcoides ethenogenes 195 hydrogenase, EchF subunit YP_181594.1 796678 D 243164 CDS YP_181595.1 57234352 3229819 complement(797110..798039) 1 NC_002936.3 lysyl-tRNA synthetase-related protein 798039 3229819 DET0869 Dehalococcoides ethenogenes 195 lysyl-tRNA synthetase-related protein YP_181595.1 797110 R 243164 CDS YP_181596.1 57234351 3229818 complement(798044..798610) 1 NC_002936.3 identified by match to protein family HMM TIGR00038; translation elongation factor P 798610 efp-2 3229818 efp-2 Dehalococcoides ethenogenes 195 translation elongation factor P YP_181596.1 798044 R 243164 CDS YP_181597.1 57234350 3229817 798805..799290 1 NC_002936.3 MarR family transcriptional regulator 799290 3229817 DET0871 Dehalococcoides ethenogenes 195 MarR family transcriptional regulator YP_181597.1 798805 D 243164 CDS YP_181598.1 57234349 3229816 799295..802240 1 NC_002936.3 MmpL family membrane protein 802240 3229816 DET0872 Dehalococcoides ethenogenes 195 MmpL family membrane protein YP_181598.1 799295 D 243164 CDS YP_181599.1 57234348 3229815 complement(802243..802911) 1 NC_002936.3 DNA-binding protein 802911 3229815 DET0873 Dehalococcoides ethenogenes 195 DNA-binding protein YP_181599.1 802243 R 243164 CDS YP_181600.1 57234347 3229814 802933..803160 1 NC_002936.3 hypothetical protein 803160 3229814 DET0874 Dehalococcoides ethenogenes 195 hypothetical protein YP_181600.1 802933 D 243164 CDS YP_181601.1 57235093 3230564 complement(803344..803616) 1 NC_002936.3 identified by similarity to GP:27462922; reductive dehalogenase anchoring protein 803616 3230564 DET0875 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_181601.1 803344 R 243164 CDS YP_181602.1 57234338 3229805 complement(803653..805185) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 805185 3229805 DET0876 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_181602.1 803653 R 243164 CDS YP_181603.1 57235092 3230563 805598..806233 1 NC_002936.3 identified by similarity to GP:10835922; hypothetical protein 806233 3230563 DET0877 Dehalococcoides ethenogenes 195 hypothetical protein YP_181603.1 805598 D 243164 CDS YP_181604.1 57234337 3229804 complement(806378..806929) 1 NC_002936.3 identified by similarity to GP:6690145; hypothetical protein 806929 3229804 DET0878 Dehalococcoides ethenogenes 195 hypothetical protein YP_181604.1 806378 R 243164 CDS YP_181605.1 57235107 3230579 complement(806942..807490) 1 NC_002936.3 identified by match to protein family HMM PF01844; HNH endonuclease 807490 3230579 DET0879 Dehalococcoides ethenogenes 195 HNH endonuclease YP_181605.1 806942 R 243164 CDS YP_181606.1 57235106 3230578 807588..808082 1 NC_002936.3 LuxR family transcriptional regulator 808082 3230578 DET0880 Dehalococcoides ethenogenes 195 LuxR family transcriptional regulator YP_181606.1 807588 D 243164 CDS YP_181607.1 57234336 3229803 808039..808938 1 NC_002936.3 identified by similarity to GP:601880; hypothetical protein 808938 3229803 DET0881 Dehalococcoides ethenogenes 195 hypothetical protein YP_181607.1 808039 D 243164 CDS YP_181608.1 57234335 3229802 809070..809294 1 NC_002936.3 identified by match to protein family HMM TIGR01764; excisionase DNA-binding protein 809294 3229802 DET0882 Dehalococcoides ethenogenes 195 excisionase DNA-binding protein YP_181608.1 809070 D 243164 CDS YP_181609.1 57234334 3229801 809291..810598 1 NC_002936.3 phage integrase site specific recombinase 810598 3229801 DET0883 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_181609.1 809291 D 243164 CDS YP_181610.1 57234333 3229800 complement(810595..811248) 1 NC_002936.3 identified by similarity to SP:P31080; match to protein family HMM PF00717; transcriptional repressor LexA 811248 3229800 DET0884 Dehalococcoides ethenogenes 195 transcriptional repressor LexA YP_181610.1 810595 R 243164 CDS YP_181611.1 57234332 3229799 811359..811589 1 NC_002936.3 hypothetical protein 811589 3229799 DET0885 Dehalococcoides ethenogenes 195 hypothetical protein YP_181611.1 811359 D 243164 CDS YP_181612.1 57234331 3229798 812082..814688 1 NC_002936.3 identified by similarity to SP:Q08346; DNA primase domain-containing protein 814688 3229798 DET0886 Dehalococcoides ethenogenes 195 DNA primase domain-containing protein YP_181612.1 812082 D 243164 CDS YP_181613.1 57234321 3229788 815014..815649 1 NC_002936.3 resolvase domain-containing protein 815649 3229788 DET0887 Dehalococcoides ethenogenes 195 resolvase domain-containing protein YP_181613.1 815014 D 243164 CDS YP_181614.1 57234320 3229787 complement(815703..815888) 1 NC_002936.3 hypothetical protein 815888 3229787 DET0888 Dehalococcoides ethenogenes 195 hypothetical protein YP_181614.1 815703 R 243164 CDS YP_181615.1 57234319 3229786 816371..816964 1 NC_002936.3 hypothetical protein 816964 3229786 DET0889 Dehalococcoides ethenogenes 195 hypothetical protein YP_181615.1 816371 D 243164 CDS YP_181616.1 57234318 3229785 complement(817252..817488) 1 NC_002936.3 hypothetical protein 817488 3229785 DET0890 Dehalococcoides ethenogenes 195 hypothetical protein YP_181616.1 817252 R 243164 CDS YP_181617.1 57234317 3229784 817778..818047 1 NC_002936.3 hypothetical protein 818047 3229784 DET0891 Dehalococcoides ethenogenes 195 hypothetical protein YP_181617.1 817778 D 243164 CDS YP_181618.1 57234316 3229783 complement(818037..818381) 1 NC_002936.3 identified by similarity to OMNI:NTL03SA2242; hypothetical protein 818381 3229783 DET0892 Dehalococcoides ethenogenes 195 hypothetical protein YP_181618.1 818037 R 243164 CDS YP_181619.1 57234315 3229782 complement(818381..820141) 1 NC_002936.3 hypothetical protein 820141 3229782 DET0893 Dehalococcoides ethenogenes 195 hypothetical protein YP_181619.1 818381 R 243164 CDS YP_181620.1 57234314 3229781 complement(820138..821127) 1 NC_002936.3 hypothetical protein 821127 3229781 DET0894 Dehalococcoides ethenogenes 195 hypothetical protein YP_181620.1 820138 R 243164 CDS YP_181621.1 57234367 3229834 complement(821124..821933) 1 NC_002936.3 hypothetical protein 821933 3229834 DET0895 Dehalococcoides ethenogenes 195 hypothetical protein YP_181621.1 821124 R 243164 CDS YP_181622.1 57234366 3229833 complement(821943..822371) 1 NC_002936.3 hypothetical protein 822371 3229833 DET0896 Dehalococcoides ethenogenes 195 hypothetical protein YP_181622.1 821943 R 243164 CDS YP_181623.1 57234365 3229832 complement(822372..822734) 1 NC_002936.3 hypothetical protein 822734 3229832 DET0897 Dehalococcoides ethenogenes 195 hypothetical protein YP_181623.1 822372 R 243164 CDS YP_181624.1 57234364 3229831 complement(822740..823189) 1 NC_002936.3 hypothetical protein 823189 3229831 DET0898 Dehalococcoides ethenogenes 195 hypothetical protein YP_181624.1 822740 R 243164 CDS YP_181625.1 57234363 3229830 complement(823205..823465) 1 NC_002936.3 hypothetical protein 823465 3229830 DET0899 Dehalococcoides ethenogenes 195 hypothetical protein YP_181625.1 823205 R 243164 CDS YP_181626.1 57234346 3229813 complement(823530..823985) 1 NC_002936.3 hypothetical protein 823985 3229813 DET0900 Dehalococcoides ethenogenes 195 hypothetical protein YP_181626.1 823530 R 243164 CDS YP_181627.1 57234345 3229812 824132..824428 1 NC_002936.3 hypothetical protein 824428 3229812 DET0901 Dehalococcoides ethenogenes 195 hypothetical protein YP_181627.1 824132 D 243164 CDS YP_181628.1 57234344 3229811 824409..826679 1 NC_002936.3 identified by similarity to OMNI:NTL03PA00694; hypothetical protein 826679 3229811 DET0902 Dehalococcoides ethenogenes 195 hypothetical protein YP_181628.1 824409 D 243164 CDS YP_181629.1 57234343 3229810 826681..831054 1 NC_002936.3 identified by match to protein family HMM TIGR01612; Ser/Thr protein phosphatase 831054 3229810 DET0903 Dehalococcoides ethenogenes 195 Ser/Thr protein phosphatase YP_181629.1 826681 D 243164 CDS YP_181630.1 57234342 3229809 831105..831449 1 NC_002936.3 hypothetical protein 831449 3229809 DET0904 Dehalococcoides ethenogenes 195 hypothetical protein YP_181630.1 831105 D 243164 CDS YP_181631.1 57234341 3229808 complement(831857..832816) 1 NC_002936.3 identified by similarity to SP:P55888; phage integrase site specific recombinase 832816 3229808 DET0905 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_181631.1 831857 R 243164 CDS YP_181632.1 57234340 3229807 complement(833034..833369) 1 NC_002936.3 identified by similarity to GP:29605703; hypothetical protein 833369 3229807 DET0907 Dehalococcoides ethenogenes 195 hypothetical protein YP_181632.1 833034 R 243164 CDS YP_181633.1 57234339 3229806 833734..835008 1 NC_002936.3 identified by similarity to SP:P37310; arsenical pump membrane protein 835008 3229806 DET0908 Dehalococcoides ethenogenes 195 arsenical pump membrane protein YP_181633.1 833734 D 243164 CDS YP_181634.1 57234330 3229797 835073..836395 1 NC_002936.3 hypothetical protein 836395 3229797 DET0909 Dehalococcoides ethenogenes 195 hypothetical protein YP_181634.1 835073 D 243164 CDS YP_181635.1 57234329 3229796 836422..836529 1 NC_002936.3 hypothetical protein 836529 3229796 DET0910 Dehalococcoides ethenogenes 195 hypothetical protein YP_181635.1 836422 D 243164 CDS YP_181636.1 57234328 3229795 836543..837652 1 NC_002936.3 identified by similarity to SP:P24828; match to protein family HMM PF02073; aminopeptidase 837652 3229795 DET0911 Dehalococcoides ethenogenes 195 aminopeptidase YP_181636.1 836543 D 243164 CDS YP_181637.1 57234327 3229794 837715..837819 1 NC_002936.3 hypothetical protein 837819 3229794 DET0912 Dehalococcoides ethenogenes 195 hypothetical protein YP_181637.1 837715 D 243164 CDS YP_181638.1 57234326 3229793 837894..838349 1 NC_002936.3 identified by similarity to OMNI:NTL01PA0908; hypothetical protein 838349 3229793 DET0913 Dehalococcoides ethenogenes 195 hypothetical protein YP_181638.1 837894 D 243164 CDS YP_181639.1 57234325 3229792 838407..839108 1 NC_002936.3 hypothetical protein 839108 3229792 DET0914 Dehalococcoides ethenogenes 195 hypothetical protein YP_181639.1 838407 D 243164 CDS YP_181640.1 57234324 3229791 complement(839113..839919) 1 NC_002936.3 hypothetical protein 839919 3229791 DET0915 Dehalococcoides ethenogenes 195 hypothetical protein YP_181640.1 839113 R 243164 CDS YP_181641.1 57234323 3229790 complement(839903..840811) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA0630; hypothetical protein 840811 3229790 DET0916 Dehalococcoides ethenogenes 195 hypothetical protein YP_181641.1 839903 R 243164 CDS YP_181642.1 57234322 3229789 complement(841009..841209) 1 NC_002936.3 hypothetical protein 841209 3229789 DET0917 Dehalococcoides ethenogenes 195 hypothetical protein YP_181642.1 841009 R 243164 CDS YP_181643.1 57234312 3229779 complement(841236..841490) 1 NC_002936.3 hypothetical protein 841490 3229779 DET0918 Dehalococcoides ethenogenes 195 hypothetical protein YP_181643.1 841236 R 243164 CDS YP_181644.1 57234311 3229778 complement(841644..842378) 1 NC_002936.3 identified by similarity to OMNI:MJ1526; hypothetical protein 842378 3229778 DET0919 Dehalococcoides ethenogenes 195 hypothetical protein YP_181644.1 841644 R 243164 CDS YP_181645.1 57234310 3229777 complement(842388..842798) 1 NC_002936.3 iron-sulfur cluster-binding protein 842798 3229777 DET0920 Dehalococcoides ethenogenes 195 iron-sulfur cluster-binding protein YP_181645.1 842388 R 243164 CDS YP_181646.1 57234309 3229776 complement(842807..844033) 1 NC_002936.3 identified by similarity to OMNI:NTL01SS00401; match to protein family HMM PF01837; hypothetical protein 844033 3229776 DET0921 Dehalococcoides ethenogenes 195 hypothetical protein YP_181646.1 842807 R 243164 CDS YP_181647.1 57234308 3229775 844253..845344 1 NC_002936.3 identified by similarity to SP:P24559; match to protein family HMM TIGR01420; twitching mobility protein 845344 pilT-1 3229775 pilT-1 Dehalococcoides ethenogenes 195 twitching mobility protein YP_181647.1 844253 D 243164 CDS YP_181648.1 57234307 3229774 845625..845996 1 NC_002936.3 identified by similarity to SP:O68852; match to protein family HMM PF00507; proton-translocating NADH-quinone oxidoreductase, A subunit 845996 3229774 DET0923 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, A subunit YP_181648.1 845625 D 243164 CDS YP_181649.1 57234306 3229773 845987..846589 1 NC_002936.3 identified by match to protein family HMM TIGR01957; proton-translocating NADH-quinone oxidoreductase, B subunit 846589 3229773 DET0924 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, B subunit YP_181649.1 845987 D 243164 CDS YP_181650.1 57234305 3229772 846594..847040 1 NC_002936.3 identified by similarity to SP:O84971; proton-translocating NADH-quinone oxidoreductase, C subunit 847040 3229772 DET0925 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, C subunit YP_181650.1 846594 D 243164 CDS YP_181651.1 57234304 3229771 847030..848133 1 NC_002936.3 identified by match to protein family HMM TIGR01962; proton-translocating NADH-quinone oxidoreductase, D subunit 848133 3229771 DET0926 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, D subunit YP_181651.1 847030 D 243164 CDS YP_181652.1 57234303 3229770 848133..849194 1 NC_002936.3 identified by similarity to SP:P33603; proton-translocating NADH-quinone oxidoreductase, H subunit 849194 3229770 DET0927 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, H subunit YP_181652.1 848133 D 243164 CDS YP_181653.1 57234302 3229769 849220..849729 1 NC_002936.3 identified by similarity to SP:Q00236; proton-translocating NADH-quinone oxidoreductase, I subunit 849729 3229769 DET0928 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, I subunit YP_181653.1 849220 D 243164 CDS YP_181654.1 57234301 3229768 849736..850218 1 NC_002936.3 identified by similarity to SP:P50975; proton-translocating NADH-quinone oxidoreductase, J subunit 850218 3229768 DET0929 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, J subunit YP_181654.1 849736 D 243164 CDS YP_181655.1 57234300 3229767 850220..850525 1 NC_002936.3 identified by similarity to SP:P50940; proton-translocating NADH-quinone oxidoreductase, K subunit 850525 3229767 DET0930 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, K subunit YP_181655.1 850220 D 243164 CDS YP_181656.1 57234291 3229758 850542..852506 1 NC_002936.3 identified by match to protein family HMM TIGR01974; proton-translocating NADH-quinone oxidoreductase, L subunit 852506 3229758 DET0931 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, L subunit YP_181656.1 850542 D 243164 CDS YP_181657.1 57234290 3229757 852516..854009 1 NC_002936.3 identified by match to protein family HMM TIGR01972; proton-translocating NADH-quinone oxidoreductase, M subunit 854009 3229757 DET0932 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, M subunit YP_181657.1 852516 D 243164 CDS YP_181658.1 57234289 3229756 854028..855473 1 NC_002936.3 identified by match to protein family HMM TIGR01770; proton-translocating NADH-quinone oxidoreductase, N subunit 855473 3229756 DET0933 Dehalococcoides ethenogenes 195 proton-translocating NADH-quinone oxidoreductase, N subunit YP_181658.1 854028 D 243164 CDS YP_181659.1 57234288 3229755 855484..856278 1 NC_002936.3 identified by match to protein family HMM TIGR00010; TatD family hydrolase 856278 3229755 DET0934 Dehalococcoides ethenogenes 195 TatD family hydrolase YP_181659.1 855484 D 243164 CDS YP_181660.1 57234287 3229754 complement(856258..856914) 1 NC_002936.3 identified by match to protein family HMM TIGR01083; endonuclease III 856914 nth 3229754 nth Dehalococcoides ethenogenes 195 endonuclease III YP_181660.1 856258 R 243164 CDS YP_181661.1 57234286 3229753 857033..858553 1 NC_002936.3 identified by match to protein family HMM TIGR00313; cobyric acid synthase CobQ 858553 cobQ 3229753 cobQ Dehalococcoides ethenogenes 195 cobyric acid synthase CobQ YP_181661.1 857033 D 243164 CDS YP_181662.1 57234285 3229752 858550..858960 1 NC_002936.3 identified by similarity to SP:P76084; match to protein family HMM TIGR00369; thioesterase 858960 3229752 DET0937 Dehalococcoides ethenogenes 195 thioesterase YP_181662.1 858550 D 243164 CDS YP_181663.1 57234275 3229742 complement(858979..859791) 1 NC_002936.3 identified by similarity to SP:P22730; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein 859791 3229742 DET0938 Dehalococcoides ethenogenes 195 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein YP_181663.1 858979 R 243164 CDS YP_181664.1 57234274 3229741 complement(859778..860044) 1 NC_002936.3 hypothetical protein 860044 3229741 DET0939 Dehalococcoides ethenogenes 195 hypothetical protein YP_181664.1 859778 R 243164 CDS YP_181665.1 57234273 3229740 complement(860054..861343) 1 NC_002936.3 AMP-binding enzyme 861343 3229740 DET0940 Dehalococcoides ethenogenes 195 AMP-binding enzyme YP_181665.1 860054 R 243164 CDS YP_181666.1 57234272 3229739 complement(861334..862125) 1 NC_002936.3 identified by similarity to SP:P21630; high-affinity branched chain amino acid ABC transporter, ATP-binding protein 862125 3229739 DET0941 Dehalococcoides ethenogenes 195 high-affinity branched chain amino acid ABC transporter, ATP-binding protein YP_181666.1 861334 R 243164 CDS YP_181667.1 57234271 3229738 complement(862146..863432) 1 NC_002936.3 lipoprotein 863432 3229738 DET0942 Dehalococcoides ethenogenes 195 lipoprotein YP_181667.1 862146 R 243164 CDS YP_181668.1 57234270 3229737 complement(863521..864813) 1 NC_002936.3 lipoprotein 864813 3229737 DET0943 Dehalococcoides ethenogenes 195 lipoprotein YP_181668.1 863521 R 243164 CDS YP_181669.1 57234269 3229736 complement(864856..865908) 1 NC_002936.3 identified by similarity to SP:P22729; high-affinity branched-chain amino acid ABC transporter, permease 865908 3229736 DET0944 Dehalococcoides ethenogenes 195 high-affinity branched-chain amino acid ABC transporter, permease YP_181669.1 864856 R 243164 CDS YP_181670.1 57234260 3229727 complement(865911..866795) 1 NC_002936.3 identified by similarity to SP:P08340; high-affinity branched-chain amino acid ABC transporter, permease 866795 3229727 DET0945 Dehalococcoides ethenogenes 195 high-affinity branched-chain amino acid ABC transporter, permease YP_181670.1 865911 R 243164 CDS YP_181671.1 57234259 3229726 complement(866805..868697) 1 NC_002936.3 AMP-binding protein 868697 3229726 DET0946 Dehalococcoides ethenogenes 195 AMP-binding protein YP_181671.1 866805 R 243164 CDS YP_181672.1 57234258 3229725 869031..870827 1 NC_002936.3 identified by similarity to SP:O07835; indolepyruvate ferredoxin oxidoreductase, alpha subunit 870827 iorA 3229725 iorA Dehalococcoides ethenogenes 195 indolepyruvate ferredoxin oxidoreductase, alpha subunit YP_181672.1 869031 D 243164 CDS YP_181673.1 57234257 3229724 870832..871416 1 NC_002936.3 Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.; indolepyruvate oxidoreductase subunit beta 871416 iorB 3229724 iorB Dehalococcoides ethenogenes 195 indolepyruvate oxidoreductase subunit beta YP_181673.1 870832 D 243164 CDS YP_181674.1 57234256 3229723 complement(871423..871911) 1 NC_002936.3 hypothetical protein 871911 3229723 DET0949 Dehalococcoides ethenogenes 195 hypothetical protein YP_181674.1 871423 R 243164 CDS YP_181675.1 57234255 3229722 complement(871926..872126) 1 NC_002936.3 identified by similarity to OMNI:NTL01SS00193; hypothetical protein 872126 3229722 DET0950 Dehalococcoides ethenogenes 195 hypothetical protein YP_181675.1 871926 R 243164 CDS YP_181676.1 57234254 3229721 complement(872128..872511) 1 NC_002936.3 identified by similarity to SP:P05340; match to protein family HMM PF01592; NifU domain-containing protein 872511 3229721 DET0951 Dehalococcoides ethenogenes 195 NifU domain-containing protein YP_181676.1 872128 R 243164 CDS YP_181677.1 57234253 3229720 872691..872933 1 NC_002936.3 identified by similarity to OMNI:TM0315; hypothetical protein 872933 3229720 DET0952 Dehalococcoides ethenogenes 195 hypothetical protein YP_181677.1 872691 D 243164 CDS YP_181678.1 57234243 3229710 872945..875431 1 NC_002936.3 identified by similarity to SP:P37279; match to protein family HMM PF00403; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 875431 3229710 DET0953 Dehalococcoides ethenogenes 195 copper-translocating P-type ATPase YP_181678.1 872945 D 243164 CDS YP_181679.1 57234242 3229709 875527..876015 1 NC_002936.3 Hsp20/alpha crystallin family protein 876015 3229709 DET0954 Dehalococcoides ethenogenes 195 Hsp20/alpha crystallin family protein YP_181679.1 875527 D 243164 CDS YP_181680.1 57234241 3229708 876070..876897 1 NC_002936.3 identified by similarity to SP:P49944; bacterioferritin domain-containing protein 876897 3229708 DET0955 Dehalococcoides ethenogenes 195 bacterioferritin domain-containing protein YP_181680.1 876070 D 243164 CDS YP_181681.1 57234240 3229707 876927..877505 1 NC_002936.3 identified by similarity to SP:Q03300; match to protein family HMM PF02777; superoxide dismutase 877505 sod 3229707 sod Dehalococcoides ethenogenes 195 superoxide dismutase YP_181681.1 876927 D 243164 CDS YP_181682.1 57234239 3229706 complement(877880..878182) 1 NC_002936.3 identified by match to protein family HMM PF01713; Smr domain-containing protein 878182 3229706 DET0959 Dehalococcoides ethenogenes 195 Smr domain-containing protein YP_181682.1 877880 R 243164 CDS YP_181683.1 57234238 3229705 878319..879101 1 NC_002936.3 imidazoleglycerol phosphate synthase, cyclase subunit 879101 3229705 DET0960 Dehalococcoides ethenogenes 195 imidazoleglycerol phosphate synthase, cyclase subunit YP_181683.1 878319 D 243164 CDS YP_181684.1 57234237 3229704 879202..880254 1 NC_002936.3 identified by similarity to OMNI:NTL01MM1085; match to protein family HMM PF01995; hypothetical protein 880254 3229704 DET0961 Dehalococcoides ethenogenes 195 hypothetical protein YP_181684.1 879202 D 243164 CDS YP_181685.1 57234236 3229703 complement(880317..881558) 1 NC_002936.3 identified by match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; MiaB family tRNA modification protein 881558 3229703 DET0962 Dehalococcoides ethenogenes 195 MiaB family tRNA modification protein YP_181685.1 880317 R 243164 CDS YP_181686.1 57234226 3229693 881647..882915 1 NC_002936.3 identified by similarity to SP:P73283; match to protein family HMM PF02801; 3-oxoacyl-ACP synthase 882915 fabF 3229693 fabF Dehalococcoides ethenogenes 195 3-oxoacyl-ACP synthase YP_181686.1 881647 D 243164 CDS YP_181687.1 57234225 3229692 882899..884599 1 NC_002936.3 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 884599 recJ 3229692 recJ Dehalococcoides ethenogenes 195 single-stranded-DNA-specific exonuclease RecJ YP_181687.1 882899 D 243164 CDS YP_181688.1 57234224 3229691 884615..885247 1 NC_002936.3 membrane protein 885247 3229691 DET0965 Dehalococcoides ethenogenes 195 membrane protein YP_181688.1 884615 D 243164 CDS YP_181689.1 57234223 3229690 complement(885356..886138) 1 NC_002936.3 identified by similarity to SP:O34752; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 886138 lgt 3229690 lgt Dehalococcoides ethenogenes 195 prolipoprotein diacylglyceryl transferase YP_181689.1 885356 R 243164 CDS YP_181690.1 57234222 3229689 complement(886205..888499) 1 NC_002936.3 identified by similarity to GP:29608270; DEAD/DEAH box helicase 888499 3229689 DET0967 Dehalococcoides ethenogenes 195 DEAD/DEAH box helicase YP_181690.1 886205 R 243164 CDS YP_181691.1 57234221 3229688 complement(888511..888807) 1 NC_002936.3 identified by similarity to OMNI:NTL01CA0729; match to protein family HMM PF04456; hypothetical protein 888807 3229688 DET0968 Dehalococcoides ethenogenes 195 hypothetical protein YP_181691.1 888511 R 243164 CDS YP_181692.1 57234220 3229687 888987..889250 1 NC_002936.3 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 889250 rpsO 3229687 rpsO Dehalococcoides ethenogenes 195 30S ribosomal protein S15 YP_181692.1 888987 D 243164 CDS YP_181693.1 57234211 3229678 889292..891454 1 NC_002936.3 identified by similarity to SP:P50849; polynucleotide phosphorylase/polyadenylase 891454 pnp 3229678 pnp Dehalococcoides ethenogenes 195 polynucleotide phosphorylase/polyadenylase YP_181693.1 889292 D 243164 CDS YP_181694.1 57234210 3229677 891471..892262 1 NC_002936.3 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 892262 dapB 3229677 dapB Dehalococcoides ethenogenes 195 dihydrodipicolinate reductase YP_181694.1 891471 D 243164 CDS YP_181695.1 57234209 3229676 892273..893289 1 NC_002936.3 identified by similarity to SP:Q04797; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 893289 asd 3229676 asd Dehalococcoides ethenogenes 195 aspartate-semialdehyde dehydrogenase YP_181695.1 892273 D 243164 CDS YP_181696.1 57234208 3229675 893291..894184 1 NC_002936.3 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 894184 dapA 3229675 dapA Dehalococcoides ethenogenes 195 dihydrodipicolinate synthase YP_181696.1 893291 D 243164 CDS YP_181697.1 57234207 3229674 894187..894810 1 NC_002936.3 identified by similarity to SP:P13249; puromycin N-acetyltransferase,-like protein 894810 3229674 DET0974 Dehalococcoides ethenogenes 195 puromycin N-acetyltransferase,-like protein YP_181697.1 894187 D 243164 CDS YP_181698.1 57234206 3229673 894812..895441 1 NC_002936.3 identified by similarity to OMNI:MT0141; acetyltransferase 895441 3229673 DET0975 Dehalococcoides ethenogenes 195 acetyltransferase YP_181698.1 894812 D 243164 CDS YP_181699.1 57234313 3229780 complement(895517..896788) 1 NC_002936.3 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 896788 purA 3229780 purA Dehalococcoides ethenogenes 195 adenylosuccinate synthetase YP_181699.1 895517 R 243164 CDS YP_181700.1 57234299 3229766 complement(896894..897475) 1 NC_002936.3 identified by similarity to GP:10442119; CDP-alcohol phosphatidyltransferase 897475 3229766 DET0977 Dehalococcoides ethenogenes 195 CDP-alcohol phosphatidyltransferase YP_181700.1 896894 R 243164 CDS YP_181701.1 57234298 3229765 complement(897521..898669) 1 NC_002936.3 identified by similarity to OMNI:NTL01ML0454; glycosyl transferase, group 1 family protein 898669 3229765 DET0978 Dehalococcoides ethenogenes 195 glycosyl transferase, group 1 family protein YP_181701.1 897521 R 243164 CDS YP_181702.1 57234297 3229764 complement(898713..899825) 1 NC_002936.3 identified by match to protein family HMM PF01658; myo-inositol-1-phosphate synthase 899825 3229764 DET0979 Dehalococcoides ethenogenes 195 myo-inositol-1-phosphate synthase YP_181702.1 898713 R 243164 CDS YP_181703.1 57234296 3229763 complement(899972..900145) 1 NC_002936.3 hypothetical protein 900145 3229763 DET0980 Dehalococcoides ethenogenes 195 hypothetical protein YP_181703.1 899972 R 243164 CDS YP_181704.1 57234295 3229762 complement(900192..901094) 1 NC_002936.3 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 901094 truB 3229762 truB Dehalococcoides ethenogenes 195 tRNA pseudouridine synthase B YP_181704.1 900192 R 243164 CDS YP_181705.1 57234294 3229761 complement(901097..901453) 1 NC_002936.3 identified by similarity to SP:P09170; match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A 901453 rbfA 3229761 rbfA Dehalococcoides ethenogenes 195 ribosome-binding factor A YP_181705.1 901097 R 243164 CDS YP_181706.1 57234293 3229760 complement(901453..903234) 1 NC_002936.3 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 903234 infB 3229760 infB Dehalococcoides ethenogenes 195 translation initiation factor IF-2 YP_181706.1 901453 R 243164 CDS YP_181707.1 57234292 3229759 complement(903215..903529) 1 NC_002936.3 identified by similarity to OMNI:NTL01TT1300; match to protein family HMM PF04296; hypothetical protein 903529 3229759 DET0984 Dehalococcoides ethenogenes 195 hypothetical protein YP_181707.1 903215 R 243164 CDS YP_181708.1 57234284 3229751 complement(903504..904979) 1 NC_002936.3 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 904979 nusA 3229751 nusA Dehalococcoides ethenogenes 195 transcription elongation factor NusA YP_181708.1 903504 R 243164 CDS YP_181709.1 57234283 3229750 905169..906692 1 NC_002936.3 identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368; Mg chelatase-like protein 906692 3229750 DET0986 Dehalococcoides ethenogenes 195 Mg chelatase-like protein YP_181709.1 905169 D 243164 CDS YP_181710.1 57234282 3229749 906694..907560 1 NC_002936.3 identified by similarity to OMNI:NTL01BS1205; acetyltransferase 907560 3229749 DET0987 Dehalococcoides ethenogenes 195 acetyltransferase YP_181710.1 906694 D 243164 CDS YP_181711.1 57234281 3229748 complement(907605..908039) 1 NC_002936.3 identified by similarity to GP:29896471; acetyltransferase 908039 3229748 DET0988 Dehalococcoides ethenogenes 195 acetyltransferase YP_181711.1 907605 R 243164 CDS YP_181712.1 57234280 3229747 908144..908788 1 NC_002936.3 identified by similarity to OMNI:NMB0465; match to protein family HMM PF04367; hypothetical protein 908788 3229747 DET0989 Dehalococcoides ethenogenes 195 hypothetical protein YP_181712.1 908144 D 243164 CDS YP_181713.1 57234279 3229746 complement(908864..909238) 1 NC_002936.3 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 909238 rplL 3229746 rplL Dehalococcoides ethenogenes 195 50S ribosomal protein L7/L12 YP_181713.1 908864 R 243164 CDS YP_181714.1 57234278 3229745 complement(909274..909804) 1 NC_002936.3 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 909804 rplJ 3229745 rplJ Dehalococcoides ethenogenes 195 50S ribosomal protein L10 YP_181714.1 909274 R 243164 CDS YP_181715.1 57234277 3229744 complement(909962..910675) 1 NC_002936.3 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 910675 rplA 3229744 rplA Dehalococcoides ethenogenes 195 50S ribosomal protein L1 YP_181715.1 909962 R 243164 CDS YP_181716.1 57234276 3229743 complement(910679..911101) 1 NC_002936.3 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 911101 rplK 3229743 rplK Dehalococcoides ethenogenes 195 50S ribosomal protein L11 YP_181716.1 910679 R 243164 CDS YP_181717.1 57234268 3229735 complement(911120..911653) 1 NC_002936.3 identified by similarity to SP:Q06795; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription antitermination protein NusG 911653 nusG 3229735 nusG Dehalococcoides ethenogenes 195 transcription antitermination protein NusG YP_181717.1 911120 R 243164 CDS YP_181718.1 57234267 3229734 complement(911699..911917) 1 NC_002936.3 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 911917 secE 3229734 secE Dehalococcoides ethenogenes 195 preprotein translocase subunit SecE YP_181718.1 911699 R 243164 CDS YP_181719.1 57235109 3230581 complement(911941..912108) 1 NC_002936.3 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 912108 rpmG 3230581 rpmG Dehalococcoides ethenogenes 195 50S ribosomal protein L33 YP_181719.1 911941 R 243164 CDS YP_181720.1 57234266 3229733 complement(912110..913312) 1 NC_002936.3 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 913312 tuf 3229733 tuf Dehalococcoides ethenogenes 195 elongation factor Tu YP_181720.1 912110 R 243164 CDS YP_181721.1 57234265 3229732 complement(913838..914551) 1 NC_002936.3 identified by similarity to OMNI:NTL01PA1525; hypothetical protein 914551 3229732 DET1001 Dehalococcoides ethenogenes 195 hypothetical protein YP_181721.1 913838 R 243164 CDS YP_181722.1 57234264 3229731 complement(914564..915781) 1 NC_002936.3 identified by similarity to OMNI:NTL01CG0396; glycosyl transferase, group 1 family protein 915781 3229731 DET1002 Dehalococcoides ethenogenes 195 glycosyl transferase, group 1 family protein YP_181722.1 914564 R 243164 CDS YP_181723.1 57234263 3229730 complement(915785..916762) 1 NC_002936.3 hypothetical protein 916762 3229730 DET1003 Dehalococcoides ethenogenes 195 hypothetical protein YP_181723.1 915785 R 243164 CDS YP_181724.1 57234262 3229729 complement(916746..916877) 1 NC_002936.3 hypothetical protein 916877 3229729 DET1004 Dehalococcoides ethenogenes 195 hypothetical protein YP_181724.1 916746 R 243164 CDS YP_181725.1 57234261 3229728 916889..917227 1 NC_002936.3 ArsR family transcriptional regulator 917227 3229728 DET1005 Dehalococcoides ethenogenes 195 ArsR family transcriptional regulator YP_181725.1 916889 D 243164 CDS YP_181726.1 57234252 3229719 917227..918258 1 NC_002936.3 permease 918258 3229719 DET1006 Dehalococcoides ethenogenes 195 permease YP_181726.1 917227 D 243164 CDS YP_181727.1 57234251 3229718 918278..918520 1 NC_002936.3 identified by match to protein family HMM TIGR00412; redox-active disulfide protein 2 918520 3229718 DET1007 Dehalococcoides ethenogenes 195 redox-active disulfide protein 2 YP_181727.1 918278 D 243164 CDS YP_181728.1 57234250 3229717 complement(918594..919406) 1 NC_002936.3 identified by similarity to OMNI:SP1661; hypothetical protein 919406 3229717 DET1008 Dehalococcoides ethenogenes 195 hypothetical protein YP_181728.1 918594 R 243164 CDS YP_181729.1 57234249 3229716 919661..919873 1 NC_002936.3 iron-sulfur cluster-binding protein 919873 3229716 DET1009 Dehalococcoides ethenogenes 195 iron-sulfur cluster-binding protein YP_181729.1 919661 D 243164 CDS YP_181730.1 57234248 3229715 complement(919856..920365) 1 NC_002936.3 identified by similarity to GP:28809963; hypothetical protein 920365 3229715 DET1010 Dehalococcoides ethenogenes 195 hypothetical protein YP_181730.1 919856 R 243164 CDS YP_181731.1 57234247 3229714 complement(920404..920640) 1 NC_002936.3 hypothetical protein 920640 3229714 DET1011 Dehalococcoides ethenogenes 195 hypothetical protein YP_181731.1 920404 R 243164 CDS YP_181732.1 57234246 3229713 920639..920776 1 NC_002936.3 hypothetical protein 920776 3229713 DET1012 Dehalococcoides ethenogenes 195 hypothetical protein YP_181732.1 920639 D 243164 CDS YP_181733.1 57234245 3229712 complement(920892..921143) 1 NC_002936.3 hypothetical protein 921143 3229712 DET1013 Dehalococcoides ethenogenes 195 hypothetical protein YP_181733.1 920892 R 243164 CDS YP_181734.1 57234244 3229711 complement(921344..921733) 1 NC_002936.3 ACT domain-containing protein 921733 3229711 DET1014 Dehalococcoides ethenogenes 195 ACT domain-containing protein YP_181734.1 921344 R 243164 CDS YP_181735.1 57234235 3229702 complement(921754..923073) 1 NC_002936.3 identified by similarity to SP:P76085; phenylacetate-CoA ligase 923073 paaK 3229702 paaK Dehalococcoides ethenogenes 195 phenylacetate-CoA ligase YP_181735.1 921754 R 243164 CDS YP_181736.1 57234234 3229701 complement(923278..927054) 1 NC_002936.3 identified by match to protein family HMM TIGR00229; match to protein family HMM TIGR01612; sensory box sensor histidine kinase/response regulator 927054 3229701 DET1016 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase/response regulator YP_181736.1 923278 R 243164 CDS YP_181737.1 57234233 3229700 927090..927227 1 NC_002936.3 hypothetical protein 927227 3229700 DET1017 Dehalococcoides ethenogenes 195 hypothetical protein YP_181737.1 927090 D 243164 CDS YP_181738.1 57234232 3229699 complement(927224..927793) 1 NC_002936.3 identified by similarity to OMNI:NTL02LI3523; hypothetical protein 927793 3229699 DET1018 Dehalococcoides ethenogenes 195 hypothetical protein YP_181738.1 927224 R 243164 CDS YP_181739.1 57234231 3229698 complement(930011..930214) 1 NC_002936.3 hypothetical protein 930214 3229698 DET1021 Dehalococcoides ethenogenes 195 hypothetical protein YP_181739.1 930011 R 243164 CDS YP_181740.1 57234230 3229697 complement(930370..930462) 1 NC_002936.3 hypothetical protein 930462 3229697 DET1022 Dehalococcoides ethenogenes 195 hypothetical protein YP_181740.1 930370 R 243164 CDS YP_181741.1 57234229 3229696 931014..931727 1 NC_002936.3 identified by similarity to SP:P51833; match to protein family HMM PF00035; ribonuclease III 931727 rnc 3229696 rnc Dehalococcoides ethenogenes 195 ribonuclease III YP_181741.1 931014 D 243164 CDS YP_181742.1 57234228 3229695 931757..931897 1 NC_002936.3 hypothetical protein 931897 3229695 DET1026 Dehalococcoides ethenogenes 195 hypothetical protein YP_181742.1 931757 D 243164 CDS YP_181743.1 57234227 3229694 931919..932194 1 NC_002936.3 catalyzes the hydrolysis of acylphosphate; acylphosphatase 932194 3229694 DET1027 Dehalococcoides ethenogenes 195 acylphosphatase YP_181743.1 931919 D 243164 CDS YP_181744.1 57234219 3229686 complement(932220..932954) 1 NC_002936.3 hypothetical protein 932954 3229686 DET1028 Dehalococcoides ethenogenes 195 hypothetical protein YP_181744.1 932220 R 243164 CDS YP_181745.1 57234218 3229685 complement(933055..933207) 1 NC_002936.3 hypothetical protein 933207 3229685 DET1029 Dehalococcoides ethenogenes 195 hypothetical protein YP_181745.1 933055 R 243164 CDS YP_181746.1 57234217 3229684 complement(933492..934979) 1 NC_002936.3 identified by similarity to SP:P27888; cytosol aminopeptidase 934979 3229684 DET1030 Dehalococcoides ethenogenes 195 cytosol aminopeptidase YP_181746.1 933492 R 243164 CDS YP_181747.1 57234216 3229683 complement(934979..935527) 1 NC_002936.3 identified by similarity to OMNI:PSPTO0976; hypothetical protein 935527 3229683 DET1031 Dehalococcoides ethenogenes 195 hypothetical protein YP_181747.1 934979 R 243164 CDS YP_181748.1 57234215 3229682 complement(935630..936484) 1 NC_002936.3 identified by match to protein family HMM TIGR00762; degV family protein 936484 3229682 DET1032 Dehalococcoides ethenogenes 195 degV family protein YP_181748.1 935630 R 243164 CDS YP_181749.1 57234214 3229681 complement(936560..938083) 1 NC_002936.3 identified by similarity to SP:P29212; long-chain-fatty-acid--CoA ligase 938083 3229681 DET1033 Dehalococcoides ethenogenes 195 long-chain-fatty-acid--CoA ligase YP_181749.1 936560 R 243164 CDS YP_181750.1 57234213 3229680 938488..938631 1 NC_002936.3 hypothetical protein 938631 3229680 DET1034 Dehalococcoides ethenogenes 195 hypothetical protein YP_181750.1 938488 D 243164 CDS YP_181751.1 57234212 3229679 938654..940018 1 NC_002936.3 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 940018 3229679 DET1035 Dehalococcoides ethenogenes 195 tryptophan synthase subunit beta YP_181751.1 938654 D 243164 CDS YP_181752.1 57234204 3229671 940140..940955 1 NC_002936.3 identified by similarity to SP:P09376; serine protease 940955 3229671 DET1036 Dehalococcoides ethenogenes 195 serine protease YP_181752.1 940140 D 243164 CDS YP_181753.1 57234203 3229670 940964..942085 1 NC_002936.3 identified by similarity to SP:O34358; similarity to SP:P09376; serine protease 942085 3229670 DET1037 Dehalococcoides ethenogenes 195 serine protease YP_181753.1 940964 D 243164 CDS YP_181754.1 57234202 3229669 complement(942098..945142) 1 NC_002936.3 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 945142 ileS 3229669 ileS Dehalococcoides ethenogenes 195 isoleucyl-tRNA synthetase YP_181754.1 942098 R 243164 CDS YP_181755.1 57234201 3229668 complement(945444..946124) 1 NC_002936.3 identified by similarity to SP:Q01620; SpoIIIJ-associated protein Jag 946124 3229668 DET1039 Dehalococcoides ethenogenes 195 SpoIIIJ-associated protein Jag YP_181755.1 945444 R 243164 CDS YP_181756.1 57234200 3229667 complement(946036..946869) 1 NC_002936.3 inner membrane protein, 60 kDa 946869 3229667 DET1040 Dehalococcoides ethenogenes 195 inner membrane protein, 60 kDa YP_181756.1 946036 R 243164 CDS YP_181757.1 57234199 3229666 complement(946995..948110) 1 NC_002936.3 identified by match to protein family HMM PF01011; PQQ repeat-containing protein 948110 3229666 DET1041 Dehalococcoides ethenogenes 195 PQQ repeat-containing protein YP_181757.1 946995 R 243164 CDS YP_181758.1 57234198 3229665 complement(948304..948666) 1 NC_002936.3 identified by similarity to SP:P25814; match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 948666 rnpA 3229665 rnpA Dehalococcoides ethenogenes 195 ribonuclease P protein component YP_181758.1 948304 R 243164 CDS YP_181759.1 57234197 3229664 complement(948726..948866) 1 NC_002936.3 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 948866 rpmH 3229664 rpmH Dehalococcoides ethenogenes 195 50S ribosomal protein L34 YP_181759.1 948726 R 243164 CDS YP_181760.1 57234187 3229654 complement(948903..949346) 1 NC_002936.3 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 949346 rpsR 3229654 rpsR Dehalococcoides ethenogenes 195 30S ribosomal protein S18 YP_181760.1 948903 R 243164 CDS YP_181761.1 57234186 3229653 complement(949381..949788) 1 NC_002936.3 identified by match to protein family HMM TIGR00621; single-strand binding protein 949788 ssb 3229653 ssb Dehalococcoides ethenogenes 195 single-strand binding protein YP_181761.1 949381 R 243164 CDS YP_181762.1 57234185 3229652 complement(949837..950166) 1 NC_002936.3 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 950166 rpsF 3229652 rpsF Dehalococcoides ethenogenes 195 30S ribosomal protein S6 YP_181762.1 949837 R 243164 CDS YP_181763.1 57234184 3229651 950564..950665 1 NC_002936.3 hypothetical protein 950665 3229651 DET1048 Dehalococcoides ethenogenes 195 hypothetical protein YP_181763.1 950564 D 243164 CDS YP_181764.1 57234183 3229650 complement(950648..951583) 1 NC_002936.3 HD domain-containing protein 951583 3229650 DET1049 Dehalococcoides ethenogenes 195 HD domain-containing protein YP_181764.1 950648 R 243164 CDS YP_181765.1 57234182 3229649 complement(951664..951807) 1 NC_002936.3 hypothetical protein 951807 3229649 DET1050 Dehalococcoides ethenogenes 195 hypothetical protein YP_181765.1 951664 R 243164 CDS YP_181766.1 57234181 3229648 951918..952160 1 NC_002936.3 hypothetical protein 952160 3229648 DET1051 Dehalococcoides ethenogenes 195 hypothetical protein YP_181766.1 951918 D 243164 CDS YP_181767.1 57234180 3229647 complement(952236..952613) 1 NC_002936.3 identified by match to protein family HMM TIGR00004; endoribonuclease L-PSP 952613 3229647 DET1052 Dehalococcoides ethenogenes 195 endoribonuclease L-PSP YP_181767.1 952236 R 243164 CDS YP_181768.1 57234179 3229646 952744..954069 1 NC_002936.3 identified by similarity to SP:Q48319; hypothetical protein 954069 3229646 DET1053 Dehalococcoides ethenogenes 195 hypothetical protein YP_181768.1 952744 D 243164 CDS YP_181769.1 57234169 3229636 complement(954162..955301) 1 NC_002936.3 tubulin/FtsZ family protein 955301 3229636 DET1054 Dehalococcoides ethenogenes 195 tubulin/FtsZ family protein YP_181769.1 954162 R 243164 CDS YP_181770.1 57234168 3229635 955485..957251 1 NC_002936.3 identified by match to protein family HMM TIGR00634; DNA repair protein RecN 957251 recN 3229635 recN Dehalococcoides ethenogenes 195 DNA repair protein RecN YP_181770.1 955485 D 243164 CDS YP_181771.1 57234167 3229634 957254..958117 1 NC_002936.3 hypothetical protein 958117 3229634 DET1056 Dehalococcoides ethenogenes 195 hypothetical protein YP_181771.1 957254 D 243164 CDS YP_181772.1 57234166 3229633 958221..958778 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0716; hypothetical protein 958778 3229633 DET1057 Dehalococcoides ethenogenes 195 hypothetical protein YP_181772.1 958221 D 243164 CDS YP_181773.1 57234165 3229632 958881..959564 1 NC_002936.3 DNA-binding response regulator 959564 3229632 DET1058 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_181773.1 958881 D 243164 CDS YP_181774.1 57234164 3229631 959571..960992 1 NC_002936.3 identified by similarity to GP:5764627; sensor histidine kinase 960992 3229631 DET1059 Dehalococcoides ethenogenes 195 sensor histidine kinase YP_181774.1 959571 D 243164 CDS YP_181775.1 57234163 3229630 961002..961163 1 NC_002936.3 hypothetical protein 961163 3229630 DET1060 Dehalococcoides ethenogenes 195 hypothetical protein YP_181775.1 961002 D 243164 CDS YP_181776.1 57234162 3229629 961200..962606 1 NC_002936.3 identified by similarity to OMNI:CT0598; match to protein family HMM PF07521; metallo-beta-lactamase 962606 3229629 DET1061 Dehalococcoides ethenogenes 195 metallo-beta-lactamase YP_181776.1 961200 D 243164 CDS YP_181777.1 57234153 3229620 complement(962598..962717) 1 NC_002936.3 hypothetical protein 962717 3229620 DET1062 Dehalococcoides ethenogenes 195 hypothetical protein YP_181777.1 962598 R 243164 CDS YP_181778.1 57234205 3229672 complement(962975..963673) 1 NC_002936.3 LuxR family DNA-binding response regulator 963673 3229672 DET1063 Dehalococcoides ethenogenes 195 LuxR family DNA-binding response regulator YP_181778.1 962975 R 243164 CDS YP_181779.1 57234196 3229663 complement(963670..966975) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA1586; match to protein family HMM TIGR00229; sensory box sensor histidine kinase 966975 3229663 DET1064 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_181779.1 963670 R 243164 CDS YP_181780.1 57234195 3229662 967110..968297 1 NC_002936.3 identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; RNA methyltransferase 968297 3229662 DET1065 Dehalococcoides ethenogenes 195 RNA methyltransferase YP_181780.1 967110 D 243164 CDS YP_181781.1 57234194 3229661 968488..969315 1 NC_002936.3 hypothetical protein 969315 3229661 DET1066 Dehalococcoides ethenogenes 195 hypothetical protein YP_181781.1 968488 D 243164 CDS YP_181782.1 57234193 3229660 complement(969361..970917) 1 NC_002936.3 phage integrase site specific recombinase 970917 3229660 DET1067 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_181782.1 969361 R 243164 CDS YP_181783.1 57235108 3230580 complement(970929..971345) 1 NC_002936.3 phage integrase site specific recombinase 971345 3230580 DET1068 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_181783.1 970929 R 243164 CDS YP_181784.1 57234192 3229659 complement(971350..972909) 1 NC_002936.3 phage integrase site specific recombinase 972909 3229659 DET1069 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_181784.1 971350 R 243164 CDS YP_181785.1 57234191 3229658 complement(973286..974761) 1 NC_002936.3 identified by match to protein family HMM PF01183; endolysin 974761 3229658 DET1070 Dehalococcoides ethenogenes 195 endolysin YP_181785.1 973286 R 243164 CDS YP_181786.1 57234190 3229657 complement(974754..975179) 1 NC_002936.3 identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593; holin 975179 3229657 DET1071 Dehalococcoides ethenogenes 195 holin YP_181786.1 974754 R 243164 CDS YP_181787.1 57234189 3229656 complement(975247..976053) 1 NC_002936.3 hypothetical protein 976053 3229656 DET1072 Dehalococcoides ethenogenes 195 hypothetical protein YP_181787.1 975247 R 243164 CDS YP_181788.1 57234188 3229655 975766..976080 1 NC_002936.3 hypothetical protein 976080 3229655 DET1073 Dehalococcoides ethenogenes 195 hypothetical protein YP_181788.1 975766 D 243164 CDS YP_181789.1 57234178 3229645 complement(976050..977468) 1 NC_002936.3 hypothetical protein 977468 3229645 DET1074 Dehalococcoides ethenogenes 195 hypothetical protein YP_181789.1 976050 R 243164 CDS YP_181790.1 57234177 3229644 complement(977471..978580) 1 NC_002936.3 hypothetical protein 978580 3229644 DET1075 Dehalococcoides ethenogenes 195 hypothetical protein YP_181790.1 977471 R 243164 CDS YP_181791.1 57234176 3229643 complement(978573..980843) 1 NC_002936.3 hypothetical protein 980843 3229643 DET1076 Dehalococcoides ethenogenes 195 hypothetical protein YP_181791.1 978573 R 243164 CDS YP_181792.1 57234175 3229642 complement(980863..981225) 1 NC_002936.3 hypothetical protein 981225 3229642 DET1077 Dehalococcoides ethenogenes 195 hypothetical protein YP_181792.1 980863 R 243164 CDS YP_181793.1 57234174 3229641 complement(981225..983948) 1 NC_002936.3 identified by match to protein family HMM PF05017; match to protein family HMM TIGR01760; TP901 family tail tape measure protein 983948 3229641 DET1078 Dehalococcoides ethenogenes 195 TP901 family tail tape measure protein YP_181793.1 981225 R 243164 CDS YP_181794.1 57234173 3229640 complement(984128..984505) 1 NC_002936.3 identified by similarity to OMNI:NTL01LI2553; hypothetical protein 984505 3229640 DET1079 Dehalococcoides ethenogenes 195 hypothetical protein YP_181794.1 984128 R 243164 CDS YP_181795.1 57234172 3229639 complement(984517..985125) 1 NC_002936.3 identified by match to protein family HMM TIGR01603; phi13 family major tail protein 985125 3229639 DET1080 Dehalococcoides ethenogenes 195 phi13 family major tail protein YP_181795.1 984517 R 243164 CDS YP_181796.1 57234171 3229638 complement(985132..985458) 1 NC_002936.3 identified by similarity to OMNI:NTL01LL1060; hypothetical protein 985458 3229638 DET1081 Dehalococcoides ethenogenes 195 hypothetical protein YP_181796.1 985132 R 243164 CDS YP_181797.1 57234170 3229637 complement(985460..985843) 1 NC_002936.3 identified by similarity to OMNI:NTL01LL1059; hypothetical protein 985843 3229637 DET1082 Dehalococcoides ethenogenes 195 hypothetical protein YP_181797.1 985460 R 243164 CDS YP_181798.1 57234161 3229628 complement(985840..986157) 1 NC_002936.3 identified by match to protein family HMM TIGR01563; head-tail adaptor 986157 3229628 DET1083 Dehalococcoides ethenogenes 195 head-tail adaptor YP_181798.1 985840 R 243164 CDS YP_181799.1 57234160 3229627 complement(986172..986459) 1 NC_002936.3 DNA packaging protein 986459 3229627 DET1084 Dehalococcoides ethenogenes 195 DNA packaging protein YP_181799.1 986172 R 243164 CDS YP_181800.1 57234159 3229626 complement(986530..987747) 1 NC_002936.3 identified by match to protein family HMM TIGR01554; HK97 family major capsid protein 987747 3229626 DET1085 Dehalococcoides ethenogenes 195 HK97 family major capsid protein YP_181800.1 986530 R 243164 CDS YP_181801.1 57234158 3229625 complement(987763..988491) 1 NC_002936.3 ATP-dependent Clp protease proteolytic subunit ClpP 988491 3229625 DET1086 Dehalococcoides ethenogenes 195 ATP-dependent Clp protease proteolytic subunit ClpP YP_181801.1 987763 R 243164 CDS YP_181802.1 57234157 3229624 complement(988488..989822) 1 NC_002936.3 identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537; HK97 family portal protein 989822 3229624 DET1087 Dehalococcoides ethenogenes 195 HK97 family portal protein YP_181802.1 988488 R 243164 CDS YP_181803.1 57234156 3229623 complement(989902..991509) 1 NC_002936.3 terminase, large subunit 991509 3229623 DET1088 Dehalococcoides ethenogenes 195 terminase, large subunit YP_181803.1 989902 R 243164 CDS YP_181804.1 57234155 3229622 complement(992386..992586) 1 NC_002936.3 identified by similarity to GP:3482867; virulence-related protein 992586 3229622 DET1089 Dehalococcoides ethenogenes 195 virulence-related protein YP_181804.1 992386 R 243164 CDS YP_181805.1 57234154 3229621 complement(992564..992788) 1 NC_002936.3 hypothetical protein 992788 3229621 DET1090 Dehalococcoides ethenogenes 195 hypothetical protein YP_181805.1 992564 R 243164 CDS YP_181806.1 57234146 3229612 complement(992779..993474) 1 NC_002936.3 identified by similarity to GP:3482866; virulence-related protein 993474 3229612 DET1091 Dehalococcoides ethenogenes 195 virulence-related protein YP_181806.1 992779 R 243164 CDS YP_181807.1 57234145 3229611 complement(993620..994885) 1 NC_002936.3 DNA methylase 994885 3229611 DET1092 Dehalococcoides ethenogenes 195 DNA methylase YP_181807.1 993620 R 243164 CDS YP_181808.1 57234144 3229610 complement(994886..995467) 1 NC_002936.3 hypothetical protein 995467 3229610 DET1093 Dehalococcoides ethenogenes 195 hypothetical protein YP_181808.1 994886 R 243164 CDS YP_181809.1 57235103 3230575 complement(995584..995931) 1 NC_002936.3 HNH endonuclease domain-containing protein 995931 3230575 DET1094 Dehalococcoides ethenogenes 195 HNH endonuclease domain-containing protein YP_181809.1 995584 R 243164 CDS YP_181810.1 57234143 3229609 complement(996094..996522) 1 NC_002936.3 hypothetical protein 996522 3229609 DET1095 Dehalococcoides ethenogenes 195 hypothetical protein YP_181810.1 996094 R 243164 CDS YP_181811.1 57234142 3229608 complement(996743..998089) 1 NC_002936.3 SNF2 domain-containing protein 998089 3229608 DET1096 Dehalococcoides ethenogenes 195 SNF2 domain-containing protein YP_181811.1 996743 R 243164 CDS YP_181812.1 57234141 3229607 complement(998070..998357) 1 NC_002936.3 identified by similarity to OMNI:EF0329; hypothetical protein 998357 3229607 DET1097 Dehalococcoides ethenogenes 195 hypothetical protein YP_181812.1 998070 R 243164 CDS YP_181813.1 57234140 3229606 complement(998517..1000886) 1 NC_002936.3 identified by similarity to GP:563258; match to protein family HMM PF05272; virulence-associated protein E 1000886 3229606 DET1098 Dehalococcoides ethenogenes 195 virulence-associated protein E YP_181813.1 998517 R 243164 CDS YP_181814.1 57234139 3229605 complement(1000886..1001215) 1 NC_002936.3 hypothetical protein 1001215 3229605 DET1099 Dehalococcoides ethenogenes 195 hypothetical protein YP_181814.1 1000886 R 243164 CDS YP_181815.1 57234138 3229604 complement(1001731..1003719) 1 NC_002936.3 family A DNA-dependent DNA polymerase 1003719 3229604 DET1100 Dehalococcoides ethenogenes 195 family A DNA-dependent DNA polymerase YP_181815.1 1001731 R 243164 CDS YP_181816.1 57234131 3229597 complement(1004005..1004577) 1 NC_002936.3 identified by similarity to GP:18920552; hypothetical protein 1004577 3229597 DET1101 Dehalococcoides ethenogenes 195 hypothetical protein YP_181816.1 1004005 R 243164 CDS YP_181817.1 57234130 3229596 complement(1004570..1005709) 1 NC_002936.3 identified by similarity to OMNI:EF0319; hypothetical protein 1005709 3229596 DET1102 Dehalococcoides ethenogenes 195 hypothetical protein YP_181817.1 1004570 R 243164 CDS YP_181818.1 57234129 3229595 complement(1005699..1006025) 1 NC_002936.3 hypothetical protein 1006025 3229595 DET1103 Dehalococcoides ethenogenes 195 hypothetical protein YP_181818.1 1005699 R 243164 CDS YP_181819.1 57234128 3229594 complement(1006322..1006843) 1 NC_002936.3 hypothetical protein 1006843 3229594 DET1104 Dehalococcoides ethenogenes 195 hypothetical protein YP_181819.1 1006322 R 243164 CDS YP_181820.1 57234127 3229593 1007315..1008274 1 NC_002936.3 identified by similarity to GP:29341850; hypothetical protein 1008274 3229593 DET1105 Dehalococcoides ethenogenes 195 hypothetical protein YP_181820.1 1007315 D 243164 CDS YP_181821.1 57234126 3229592 1008300..1008710 1 NC_002936.3 hypothetical protein 1008710 3229592 DET1106 Dehalococcoides ethenogenes 195 hypothetical protein YP_181821.1 1008300 D 243164 CDS YP_181822.1 57234125 3229591 1008713..1010545 1 NC_002936.3 identified by similarity to GP:29341852; hypothetical protein 1010545 3229591 DET1107 Dehalococcoides ethenogenes 195 hypothetical protein YP_181822.1 1008713 D 243164 CDS YP_181823.1 57234124 3229590 1010542..1010766 1 NC_002936.3 identified by similarity to OMNI:NTL03SP0465; hypothetical protein 1010766 3229590 DET1108 Dehalococcoides ethenogenes 195 hypothetical protein YP_181823.1 1010542 D 243164 CDS YP_181824.1 57234123 3229589 1010792..1014019 1 NC_002936.3 identified by match to protein family HMM TIGR01612; helicase/SNF2 domain-containing protein 1014019 3229589 DET1109 Dehalococcoides ethenogenes 195 helicase/SNF2 domain-containing protein YP_181824.1 1010792 D 243164 CDS YP_181825.1 57234107 3229573 1014033..1014701 1 NC_002936.3 identified by similarity to GP:26111617; hypothetical protein 1014701 3229573 DET1110 Dehalococcoides ethenogenes 195 hypothetical protein YP_181825.1 1014033 D 243164 CDS YP_181826.1 57234106 3229572 1014691..1015770 1 NC_002936.3 identified by similarity to SP:Q9PRB1; match to protein family HMM PF04326; ATP-binding protein 1015770 3229572 DET1111 Dehalococcoides ethenogenes 195 ATP-binding protein YP_181826.1 1014691 D 243164 CDS YP_181827.1 57234105 3229571 1015763..1017526 1 NC_002936.3 identified by similarity to SP:P40814; type III restriction-modification system, methylase subunit 1017526 3229571 DET1112 Dehalococcoides ethenogenes 195 type III restriction-modification system, methylase subunit YP_181827.1 1015763 D 243164 CDS YP_181828.1 57234104 3229570 1017541..1018026 1 NC_002936.3 identified by similarity to OMNI:NTL01MM2811; hypothetical protein 1018026 3229570 DET1113 Dehalococcoides ethenogenes 195 hypothetical protein YP_181828.1 1017541 D 243164 CDS YP_181829.1 57234103 3229569 1018023..1021082 1 NC_002936.3 identified by similarity to SP:P08764; type III restriction-modification system, restriction endonuclease subunit 1021082 3229569 DET1114 Dehalococcoides ethenogenes 195 type III restriction-modification system, restriction endonuclease subunit YP_181829.1 1018023 D 243164 CDS YP_181830.1 57234102 3229568 1021119..1022120 1 NC_002936.3 type II restriction endonuclease 1022120 3229568 DET1115 Dehalococcoides ethenogenes 195 type II restriction endonuclease YP_181830.1 1021119 D 243164 CDS YP_181831.1 57234101 3229567 1022121..1022840 1 NC_002936.3 sugar fermentation stimulation protein 1022840 3229567 DET1116 Dehalococcoides ethenogenes 195 sugar fermentation stimulation protein YP_181831.1 1022121 D 243164 CDS YP_181832.1 57234093 3229559 1022852..1023262 1 NC_002936.3 hypothetical protein 1023262 3229559 DET1117 Dehalococcoides ethenogenes 195 hypothetical protein YP_181832.1 1022852 D 243164 CDS YP_181833.1 57234092 3229558 1023272..1023745 1 NC_002936.3 identified by similarity to OMNI:SAG2033; acetyltransferase 1023745 3229558 DET1118 Dehalococcoides ethenogenes 195 acetyltransferase YP_181833.1 1023272 D 243164 CDS YP_181834.1 57234091 3229557 complement(1024018..1024119) 1 NC_002936.3 hypothetical protein 1024119 3229557 DET1119 Dehalococcoides ethenogenes 195 hypothetical protein YP_181834.1 1024018 R 243164 CDS YP_181835.1 57234090 3229556 1024118..1024792 1 NC_002936.3 identified by similarity to SP:Q02169; match to protein family HMM TIGR00172; septum formation protein MaF 1024792 maF 3229556 maF Dehalococcoides ethenogenes 195 septum formation protein MaF YP_181835.1 1024118 D 243164 CDS YP_181836.1 57234089 3229555 complement(1024844..1025269) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA2188; hypothetical protein 1025269 3229555 DET1121 Dehalococcoides ethenogenes 195 hypothetical protein YP_181836.1 1024844 R 243164 CDS YP_181837.1 57234088 3229554 complement(1025338..1027038) 1 NC_002936.3 identified by similarity to SP:Q03638; match to protein family HMM TIGR00552; glutamine-dependent NAD(+) synthetase 1027038 3229554 DET1122 Dehalococcoides ethenogenes 195 glutamine-dependent NAD(+) synthetase YP_181837.1 1025338 R 243164 CDS YP_181838.1 57234087 3229553 complement(1027124..1028455) 1 NC_002936.3 identified by similarity to SP:Q59812; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 1028455 glnA 3229553 glnA Dehalococcoides ethenogenes 195 glutamine synthetase, type I YP_181838.1 1027124 R 243164 CDS YP_181839.1 57234086 3229552 complement(1028577..1028915) 1 NC_002936.3 nitrogen regulatory protein P-II 1028915 3229552 DET1124 Dehalococcoides ethenogenes 195 nitrogen regulatory protein P-II YP_181839.1 1028577 R 243164 CDS YP_181840.1 57234077 3229543 complement(1028912..1030138) 1 NC_002936.3 identified by similarity to SP:Q07429; match to protein family HMM TIGR00836; ammonium transporter 1030138 amt 3229543 amt Dehalococcoides ethenogenes 195 ammonium transporter YP_181840.1 1028912 R 243164 CDS YP_181841.1 57234076 3229542 complement(1030278..1030949) 1 NC_002936.3 identified by similarity to SP:Q05943; transcriptional regulator 1030949 3229542 DET1126 Dehalococcoides ethenogenes 195 transcriptional regulator YP_181841.1 1030278 R 243164 CDS YP_181842.1 57234075 3229541 complement(1030971..1031741) 1 NC_002936.3 identified by similarity to OMNI:TM0394; hypothetical protein 1031741 3229541 DET1127 Dehalococcoides ethenogenes 195 hypothetical protein YP_181842.1 1030971 R 243164 CDS YP_181843.1 57234074 3229540 complement(1031742..1033244) 1 NC_002936.3 glutamate synthase 1033244 3229540 DET1128 Dehalococcoides ethenogenes 195 glutamate synthase YP_181843.1 1031742 R 243164 CDS YP_181844.1 57234073 3229539 complement(1033246..1034007) 1 NC_002936.3 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1034007 hisF 3229539 hisF Dehalococcoides ethenogenes 195 imidazole glycerol phosphate synthase subunit HisF YP_181844.1 1033246 R 243164 CDS YP_181845.1 57234072 3229538 complement(1034001..1035131) 1 NC_002936.3 identified by similarity to SP:O29310; match to protein family HMM PF00310; glutamine amidotransferase, class II 1035131 3229538 DET1130 Dehalococcoides ethenogenes 195 glutamine amidotransferase, class II YP_181845.1 1034001 R 243164 CDS YP_181846.1 57234071 3229537 complement(1035144..1036451) 1 NC_002936.3 pyridine nucleotide-disulfide oxidoreductase 1036451 3229537 DET1131 Dehalococcoides ethenogenes 195 pyridine nucleotide-disulfide oxidoreductase YP_181846.1 1035144 R 243164 CDS YP_181847.1 57234063 3229529 complement(1036448..1037065) 1 NC_002936.3 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1037065 hisH 3229529 hisH Dehalococcoides ethenogenes 195 imidazole glycerol phosphate synthase subunit HisH YP_181847.1 1036448 R 243164 CDS YP_181848.1 57234062 3229528 complement(1037081..1037512) 1 NC_002936.3 iron-sulfur cluster-binding protein 1037512 3229528 DET1133 Dehalococcoides ethenogenes 195 iron-sulfur cluster-binding protein YP_181848.1 1037081 R 243164 CDS YP_181849.1 57234061 3229527 complement(1037633..1038214) 1 NC_002936.3 hypothetical protein 1038214 3229527 DET1134 Dehalococcoides ethenogenes 195 hypothetical protein YP_181849.1 1037633 R 243164 CDS YP_181850.1 57234060 3229526 1038336..1039298 1 NC_002936.3 identified by match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 1039298 cysK 3229526 cysK Dehalococcoides ethenogenes 195 cysteine synthase A YP_181850.1 1038336 D 243164 CDS YP_181851.1 57234059 3229525 complement(1039387..1039887) 1 NC_002936.3 hypothetical protein 1039887 3229525 DET1136 Dehalococcoides ethenogenes 195 hypothetical protein YP_181851.1 1039387 R 243164 CDS YP_181852.1 57234058 3229524 1040057..1040878 1 NC_002936.3 radical SAM domain-containing protein 1040878 3229524 DET1137 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_181852.1 1040057 D 243164 CDS YP_181853.1 57234057 3229523 1040929..1041852 1 NC_002936.3 identified by match to protein family HMM TIGR00380; cobalamin biosynthesis protein CobD 1041852 cobD-4 3229523 cobD-4 Dehalococcoides ethenogenes 195 cobalamin biosynthesis protein CobD YP_181853.1 1040929 D 243164 CDS YP_181854.1 57234056 3229522 1041888..1042436 1 NC_002936.3 identified by similarity to GP:11513599; cob(I)alamin adenosyltransferase 1042436 cobA-2 3229522 cobA-2 Dehalococcoides ethenogenes 195 cob(I)alamin adenosyltransferase YP_181854.1 1041888 D 243164 CDS YP_181855.1 57234048 3229514 1042436..1043212 1 NC_002936.3 carbon-nitrogen hydrolase 1043212 3229514 DET1140 Dehalococcoides ethenogenes 195 carbon-nitrogen hydrolase YP_181855.1 1042436 D 243164 CDS YP_181856.1 57234047 3229513 1043252..1044697 1 NC_002936.3 identified by match to protein family HMM PF01522; glycosyl transferase/polysaccharide deacetylase 1044697 3229513 DET1141 Dehalococcoides ethenogenes 195 glycosyl transferase/polysaccharide deacetylase YP_181856.1 1043252 D 243164 CDS YP_181857.1 57234046 3229512 1044707..1045369 1 NC_002936.3 hypothetical protein 1045369 3229512 DET1142 Dehalococcoides ethenogenes 195 hypothetical protein YP_181857.1 1044707 D 243164 CDS YP_181858.1 57234152 3229619 complement(1045366..1046187) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM2775; hypothetical protein 1046187 3229619 DET1143 Dehalococcoides ethenogenes 195 hypothetical protein YP_181858.1 1045366 R 243164 CDS YP_181859.1 57234151 3229618 complement(1046592..1047335) 1 NC_002936.3 DNA-binding response regulator 1047335 3229618 DET1144 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_181859.1 1046592 R 243164 CDS YP_181860.1 57234150 3229616 complement(1050263..1050379) 1 NC_002936.3 hypothetical protein 1050379 3229616 DET1146 Dehalococcoides ethenogenes 195 hypothetical protein YP_181860.1 1050263 R 243164 CDS YP_181861.1 57234149 3229615 complement(1050564..1050971) 1 NC_002936.3 identified by similarity to SP:P06975; FUR family transcriptional regulator 1050971 3229615 DET1147 Dehalococcoides ethenogenes 195 FUR family transcriptional regulator YP_181861.1 1050564 R 243164 CDS YP_181862.1 57234148 3229614 complement(1051054..1051884) 1 NC_002936.3 nitrogenase cofactor biosynthesis protein NifB 1051884 3229614 DET1148 Dehalococcoides ethenogenes 195 nitrogenase cofactor biosynthesis protein NifB YP_181862.1 1051054 R 243164 CDS YP_181863.1 57234147 3229613 complement(1051981..1052475) 1 NC_002936.3 identified by similarity to OMNI:CT1099; acetyltransferase 1052475 3229613 DET1149 Dehalococcoides ethenogenes 195 acetyltransferase YP_181863.1 1051981 R 243164 CDS YP_181864.1 57234137 3229603 complement(1052490..1052792) 1 NC_002936.3 identified by similarity to SP:P07324; ferredoxin, 2Fe-2S 1052792 3229603 DET1150 Dehalococcoides ethenogenes 195 ferredoxin, 2Fe-2S YP_181864.1 1052490 R 243164 CDS YP_181865.1 57234136 3229602 complement(1052832..1053236) 1 NC_002936.3 dinitrogenase iron-molybdenum cofactor NifB/Y/X family protein 1053236 3229602 DET1151 Dehalococcoides ethenogenes 195 dinitrogenase iron-molybdenum cofactor NifB/Y/X family protein YP_181865.1 1052832 R 243164 CDS YP_181866.1 57234135 3229601 complement(1053254..1054609) 1 NC_002936.3 identified by match to protein family HMM PF00148; nitrogenase molybdenum-iron protein, beta subunit 1054609 3229601 DET1152 Dehalococcoides ethenogenes 195 nitrogenase molybdenum-iron protein, beta subunit YP_181866.1 1053254 R 243164 CDS YP_181867.1 57234134 3229600 complement(1054606..1055970) 1 NC_002936.3 identified by match to protein family HMM TIGR01283; nitrogenase MoFe cofactor biosynthesis protein NifE 1055970 nifE 3229600 nifE Dehalococcoides ethenogenes 195 nitrogenase MoFe cofactor biosynthesis protein NifE YP_181867.1 1054606 R 243164 CDS YP_181868.1 57234133 3229599 complement(1055981..1057366) 1 NC_002936.3 identified by match to protein family HMM TIGR01286; nitrogenase molybdenum-iron protein, beta subunit 1057366 nifK 3229599 nifK Dehalococcoides ethenogenes 195 nitrogenase molybdenum-iron protein, beta subunit YP_181868.1 1055981 R 243164 CDS YP_181869.1 57234132 3229598 complement(1057395..1059014) 1 NC_002936.3 identified by similarity to SP:P00467; match to protein family HMM TIGR01282; match to protein family HMM TIGR01862; nitrogenase molybdenum-iron protein alpha chain 1059014 nifD 3229598 nifD Dehalococcoides ethenogenes 195 nitrogenase molybdenum-iron protein alpha chain YP_181869.1 1057395 R 243164 CDS YP_181870.1 57234122 3229588 complement(1059026..1059418) 1 NC_002936.3 identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 1059418 3229588 DET1156 Dehalococcoides ethenogenes 195 nitrogen regulatory protein P-II YP_181870.1 1059026 R 243164 CDS YP_181871.1 57234121 3229587 complement(1059428..1059754) 1 NC_002936.3 identified by similarity to SP:Q50786; nitrogen regulatory protein P-II 1059754 3229587 DET1157 Dehalococcoides ethenogenes 195 nitrogen regulatory protein P-II YP_181871.1 1059428 R 243164 CDS YP_181872.1 57234120 3229586 complement(1059782..1060606) 1 NC_002936.3 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; nitrogenase reductase 1060606 nifH 3229586 nifH Dehalococcoides ethenogenes 195 nitrogenase reductase YP_181872.1 1059782 R 243164 CDS YP_181873.1 57234119 3229585 complement(1060784..1061890) 1 NC_002936.3 identified by match to protein family HMM PF03459; molybdenum ABC transporter, ATP-binding protein 1061890 3229585 DET1159 Dehalococcoides ethenogenes 195 molybdenum ABC transporter, ATP-binding protein YP_181873.1 1060784 R 243164 CDS YP_181874.1 57234118 3229584 complement(1061933..1062601) 1 NC_002936.3 identified by similarity to SP:P09834; similarity to GP:3955199; molybdenum ABC transporter, permease 1062601 modB 3229584 modB Dehalococcoides ethenogenes 195 molybdenum ABC transporter, permease YP_181874.1 1061933 R 243164 CDS YP_181875.1 57234117 3229583 complement(1062631..1063434) 1 NC_002936.3 identified by similarity to SP:P37329; match to protein family HMM TIGR01256; molybdenum ABC transporter, periplasmic molybdate-binding protein 1063434 modA 3229583 modA Dehalococcoides ethenogenes 195 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_181875.1 1062631 R 243164 CDS YP_181876.1 57234116 3229582 complement(1063641..1064357) 1 NC_002936.3 transcriptional regulator 1064357 3229582 DET1162 Dehalococcoides ethenogenes 195 transcriptional regulator YP_181876.1 1063641 R 243164 CDS YP_181877.1 57234115 3229581 1064576..1065055 1 NC_002936.3 identified by similarity to GP:28271879; MarR family transcriptional regulator 1065055 3229581 DET1163 Dehalococcoides ethenogenes 195 MarR family transcriptional regulator YP_181877.1 1064576 D 243164 CDS YP_181878.1 57234114 3229580 1065198..1065506 1 NC_002936.3 iron-sulfur cluster-binding protein 1065506 3229580 DET1164 Dehalococcoides ethenogenes 195 iron-sulfur cluster-binding protein YP_181878.1 1065198 D 243164 CDS YP_181879.1 57234113 3229579 complement(1065596..1066378) 1 NC_002936.3 identified by similarity to OMNI:MJ1613; hypothetical protein 1066378 3229579 DET1165 Dehalococcoides ethenogenes 195 hypothetical protein YP_181879.1 1065596 R 243164 CDS YP_181880.1 57234112 3229578 complement(1066386..1066532) 1 NC_002936.3 hypothetical protein 1066532 3229578 DET1166 Dehalococcoides ethenogenes 195 hypothetical protein YP_181880.1 1066386 R 243164 CDS YP_181881.1 57234111 3229577 complement(1066541..1066687) 1 NC_002936.3 hypothetical protein 1066687 3229577 DET1167 Dehalococcoides ethenogenes 195 hypothetical protein YP_181881.1 1066541 R 243164 CDS YP_181882.1 57234110 3229576 complement(1066680..1067150) 1 NC_002936.3 hypothetical protein 1067150 3229576 DET1168 Dehalococcoides ethenogenes 195 hypothetical protein YP_181882.1 1066680 R 243164 CDS YP_181883.1 57234109 3229575 complement(1067153..1067497) 1 NC_002936.3 hypothetical protein 1067497 3229575 DET1169 Dehalococcoides ethenogenes 195 hypothetical protein YP_181883.1 1067153 R 243164 CDS YP_181884.1 57234108 3229574 complement(1067514..1067810) 1 NC_002936.3 reductive dehalogenase anchoring protein 1067810 3229574 DET1170 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_181884.1 1067514 R 243164 CDS YP_181885.1 57234100 3229566 complement(1067812..1069410) 1 NC_002936.3 identified by similarity to GP:3002555; similarity to GP:5531941; match to protein family HMM TIGR01409; reductive dehalogenase 1069410 3229566 DET1171 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_181885.1 1067812 R 243164 CDS YP_181886.1 57234099 3229565 1069696..1070166 1 NC_002936.3 MarR family transcriptional regulator 1070166 3229565 DET1172 Dehalococcoides ethenogenes 195 MarR family transcriptional regulator YP_181886.1 1069696 D 243164 CDS YP_181887.1 57234098 3229564 1070556..1071083 1 NC_002936.3 identified by match to protein family HMM PF02663; fwdE family protein 1071083 3229564 DET1173 Dehalococcoides ethenogenes 195 fwdE family protein YP_181887.1 1070556 D 243164 CDS YP_181888.1 57234097 3229563 1071173..1072276 1 NC_002936.3 identified by match to protein family HMM PF01497; iron ABC transporter periplasmic-binding protein 1072276 3229563 DET1174 Dehalococcoides ethenogenes 195 iron ABC transporter periplasmic-binding protein YP_181888.1 1071173 D 243164 CDS YP_181889.1 57234096 3229562 1072282..1073361 1 NC_002936.3 identified by similarity to GP:17063216; iron ABC transporter permease 1073361 3229562 DET1175 Dehalococcoides ethenogenes 195 iron ABC transporter permease YP_181889.1 1072282 D 243164 CDS YP_181890.1 57234095 3229561 1073354..1074172 1 NC_002936.3 iron ABC transporter ATP-binding protein 1074172 3229561 DET1176 Dehalococcoides ethenogenes 195 iron ABC transporter ATP-binding protein YP_181890.1 1073354 D 243164 CDS YP_181891.1 57234094 3229560 complement(1074325..1075131) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA1808; hypothetical protein 1075131 3229560 DET1177 Dehalococcoides ethenogenes 195 hypothetical protein YP_181891.1 1074325 R 243164 CDS YP_181892.1 57234085 3229551 1075274..1075753 1 NC_002936.3 MarR family transcriptional regulator 1075753 3229551 DET1178 Dehalococcoides ethenogenes 195 MarR family transcriptional regulator YP_181892.1 1075274 D 243164 CDS YP_181893.1 57234084 3229550 1075797..1078022 1 NC_002936.3 identified by similarity to OMNI:NTL01TT2326; ABC transporter, ATP-binding/permease 1078022 3229550 DET1179 Dehalococcoides ethenogenes 195 ABC transporter, ATP-binding/permease YP_181893.1 1075797 D 243164 CDS YP_181894.1 57234083 3229549 1078019..1079932 1 NC_002936.3 identified by similarity to OMNI:NTL03CP0527; ABC transporter, ATP-binding/permease 1079932 3229549 DET1180 Dehalococcoides ethenogenes 195 ABC transporter, ATP-binding/permease YP_181894.1 1078019 D 243164 CDS YP_181895.1 57234082 3229548 complement(1080351..1081034) 1 NC_002936.3 hypothetical protein 1081034 3229548 DET1181 Dehalococcoides ethenogenes 195 hypothetical protein YP_181895.1 1080351 R 243164 CDS YP_181896.1 57234081 3229547 complement(1081208..1081408) 1 NC_002936.3 hypothetical protein 1081408 3229547 DET1182 Dehalococcoides ethenogenes 195 hypothetical protein YP_181896.1 1081208 R 243164 CDS YP_181897.1 57234080 3229546 complement(1081773..1082420) 1 NC_002936.3 BioY family protein 1082420 3229546 DET1184 Dehalococcoides ethenogenes 195 BioY family protein YP_181897.1 1081773 R 243164 CDS YP_181898.1 57234079 3229545 complement(1082469..1082705) 1 NC_002936.3 hypothetical protein 1082705 3229545 DET1185 Dehalococcoides ethenogenes 195 hypothetical protein YP_181898.1 1082469 R 243164 CDS YP_181899.1 57234078 3229544 1082804..1083100 1 NC_002936.3 hypothetical protein 1083100 3229544 DET1186 Dehalococcoides ethenogenes 195 hypothetical protein YP_181899.1 1082804 D 243164 CDS YP_181900.1 57234070 3229536 complement(1083097..1083564) 1 NC_002936.3 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1083564 ribH 3229536 ribH Dehalococcoides ethenogenes 195 6,7-dimethyl-8-ribityllumazine synthase YP_181900.1 1083097 R 243164 CDS YP_181901.1 57234069 3229535 complement(1083591..1084802) 1 NC_002936.3 identified by similarity to SP:P17620; match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00505; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1084802 ribBA 3229535 ribBA Dehalococcoides ethenogenes 195 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_181901.1 1083591 R 243164 CDS YP_181902.1 57234068 3229534 complement(1084835..1085452) 1 NC_002936.3 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1085452 ribE 3229534 ribE Dehalococcoides ethenogenes 195 riboflavin synthase subunit alpha YP_181902.1 1084835 R 243164 CDS YP_181903.1 57234067 3229533 complement(1085455..1086552) 1 NC_002936.3 identified by match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 1086552 ribD 3229533 ribD Dehalococcoides ethenogenes 195 riboflavin biosynthesis protein RibD YP_181903.1 1085455 R 243164 CDS YP_181904.1 57234066 3229532 complement(1086702..1087466) 1 NC_002936.3 identified by match to protein family HMM PF04402; lipoprotein 1087466 3229532 DET1191 Dehalococcoides ethenogenes 195 lipoprotein YP_181904.1 1086702 R 243164 CDS YP_181905.1 57234065 3229531 1087571..1088149 1 NC_002936.3 identified by similarity to SP:P72365; match to protein family HMM PF00461; signal peptidase I 1088149 lepB 3229531 lepB Dehalococcoides ethenogenes 195 signal peptidase I YP_181905.1 1087571 D 243164 CDS YP_181906.1 57234064 3229530 1088152..1088715 1 NC_002936.3 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1088715 pyrE 3229530 pyrE Dehalococcoides ethenogenes 195 orotate phosphoribosyltransferase YP_181906.1 1088152 D 243164 CDS YP_181907.1 57234055 3229521 1088741..1089268 1 NC_002936.3 identified by similarity to OMNI:TM0646; hypothetical protein 1089268 3229521 DET1194 Dehalococcoides ethenogenes 195 hypothetical protein YP_181907.1 1088741 D 243164 CDS YP_181908.1 57234054 3229520 complement(1089265..1090965) 1 NC_002936.3 identified by similarity to SP:P14160; match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM TIGR00585; MutL/HexB family DNA mismatch repair protein 1090965 3229520 DET1195 Dehalococcoides ethenogenes 195 MutL/HexB family DNA mismatch repair protein YP_181908.1 1089265 R 243164 CDS YP_181909.1 57234053 3229519 complement(1091057..1093273) 1 NC_002936.3 identified by similarity to SP:P56255; match to protein family HMM TIGR01369; ATP-dependent DNA helicase PcrA 1093273 pcrA 3229519 pcrA Dehalococcoides ethenogenes 195 ATP-dependent DNA helicase PcrA YP_181909.1 1091057 R 243164 CDS YP_181910.1 57234052 3229518 1093263..1093436 1 NC_002936.3 hypothetical protein 1093436 3229518 DET1197 Dehalococcoides ethenogenes 195 hypothetical protein YP_181910.1 1093263 D 243164 CDS YP_181911.1 57234051 3229517 1093541..1094089 1 NC_002936.3 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 1094089 pyrR 3229517 pyrR Dehalococcoides ethenogenes 195 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_181911.1 1093541 D 243164 CDS YP_181912.1 57234050 3229516 1094092..1095087 1 NC_002936.3 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1095087 pyrB 3229516 pyrB Dehalococcoides ethenogenes 195 aspartate carbamoyltransferase catalytic subunit YP_181912.1 1094092 D 243164 CDS YP_181913.1 57234049 3229515 1095090..1096373 1 NC_002936.3 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1096373 pyrC 3229515 pyrC Dehalococcoides ethenogenes 195 dihydroorotase YP_181913.1 1095090 D 243164 CDS YP_181914.1 57234040 3229506 1096412..1097506 1 NC_002936.3 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1097506 carA 3229506 carA Dehalococcoides ethenogenes 195 carbamoyl phosphate synthase small subunit YP_181914.1 1096412 D 243164 CDS YP_181915.1 57234039 3229505 1097532..1100801 1 NC_002936.3 identified by similarity to SP:P25994; match to protein family HMM TIGR01369; carbamoyl-phosphate synthase large subunit 1100801 carB 3229505 carB Dehalococcoides ethenogenes 195 carbamoyl-phosphate synthase large subunit YP_181915.1 1097532 D 243164 CDS YP_181916.1 57234038 3229504 1100811..1101596 1 NC_002936.3 identified by similarity to SP:P25983; dihydroorotate dehydrogenase, electron transfer subunit 1101596 pyrK 3229504 pyrK Dehalococcoides ethenogenes 195 dihydroorotate dehydrogenase, electron transfer subunit YP_181916.1 1100811 D 243164 CDS YP_181917.1 57234037 3229503 complement(1101666..1102235) 1 NC_002936.3 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1102235 folE 3229503 folE Dehalococcoides ethenogenes 195 GTP cyclohydrolase I YP_181917.1 1101666 R 243164 CDS YP_181918.1 57234036 3229502 complement(1102269..1103315) 1 NC_002936.3 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1103315 thrC 3229502 thrC Dehalococcoides ethenogenes 195 threonine synthase YP_181918.1 1102269 R 243164 CDS YP_181919.1 57234035 3229501 complement(1103324..1104625) 1 NC_002936.3 identified by similarity to SP:P08499; match to protein family HMM PF00742; homoserine dehydrogenase 1104625 metM 3229501 metM Dehalococcoides ethenogenes 195 homoserine dehydrogenase YP_181919.1 1103324 R 243164 CDS YP_181920.1 57234034 3229500 complement(1104646..1105911) 1 NC_002936.3 identified by similarity to SP:P24327; protein export protein 1105911 3229500 DET1207 Dehalococcoides ethenogenes 195 protein export protein YP_181920.1 1104646 R 243164 CDS YP_181921.1 57234025 3229491 1106216..1107301 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0055; nucleotidyltransferase 1107301 3229491 DET1208 Dehalococcoides ethenogenes 195 nucleotidyltransferase YP_181921.1 1106216 D 243164 CDS YP_181922.1 57234024 3229490 1107326..1109284 1 NC_002936.3 identified by similarity to SP:P27095; acetyl-CoA synthetase 1109284 acs 3229490 acs Dehalococcoides ethenogenes 195 acetyl-CoA synthetase YP_181922.1 1107326 D 243164 CDS YP_181923.1 57234023 3229489 1109405..1110472 1 NC_002936.3 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1110472 prfA 3229489 prfA Dehalococcoides ethenogenes 195 peptide chain release factor 1 YP_181923.1 1109405 D 243164 CDS YP_181924.1 57234022 3229488 1110472..1111305 1 NC_002936.3 identified by match to protein family HMM TIGR00536; HemK family modification methylase 1111305 3229488 DET1211 Dehalococcoides ethenogenes 195 HemK family modification methylase YP_181924.1 1110472 D 243164 CDS YP_181925.1 57234021 3229487 complement(1111385..1113445) 1 NC_002936.3 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1113445 fusA-2 3229487 fusA-2 Dehalococcoides ethenogenes 195 elongation factor G YP_181925.1 1111385 R 243164 CDS YP_181926.1 57234020 3229486 complement(1113516..1114073) 1 NC_002936.3 hypothetical protein 1114073 3229486 DET1213 Dehalococcoides ethenogenes 195 hypothetical protein YP_181926.1 1113516 R 243164 CDS YP_181927.1 57234019 3229485 complement(1114187..1114453) 1 NC_002936.3 hypothetical protein 1114453 3229485 DET1214 Dehalococcoides ethenogenes 195 hypothetical protein YP_181927.1 1114187 R 243164 CDS YP_181928.1 57234018 3229484 complement(1114487..1115395) 1 NC_002936.3 identified by similarity to SP:P21891; tyrosine recombinase XerD 1115395 xerD 3229484 xerD Dehalococcoides ethenogenes 195 tyrosine recombinase XerD YP_181928.1 1114487 R 243164 CDS YP_181929.1 57234009 3229475 1115562..1117385 1 NC_002936.3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1117385 uvrC 3229475 uvrC Dehalococcoides ethenogenes 195 excinuclease ABC subunit C YP_181929.1 1115562 D 243164 CDS YP_181930.1 57234008 3229474 1117463..1117954 1 NC_002936.3 identified by similarity to OMNI:NTL01MM3311; acetyltransferase 1117954 3229474 DET1217 Dehalococcoides ethenogenes 195 acetyltransferase YP_181930.1 1117463 D 243164 CDS YP_181931.1 57234007 3229473 complement(1117966..1118781) 1 NC_002936.3 identified by similarity to OMNI:NTL02YP4055; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 1118781 3229473 DET1218 Dehalococcoides ethenogenes 195 HAD family hydrolase YP_181931.1 1117966 R 243164 CDS YP_181932.1 57234006 3229472 1118939..1121515 1 NC_002936.3 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1121515 mutS 3229472 mutS Dehalococcoides ethenogenes 195 DNA mismatch repair protein MutS YP_181932.1 1118939 D 243164 CDS YP_181933.1 57234005 3229471 complement(1121512..1121730) 1 NC_002936.3 hypothetical protein 1121730 3229471 DET1220 Dehalococcoides ethenogenes 195 hypothetical protein YP_181933.1 1121512 R 243164 CDS YP_181934.1 57234045 3229511 complement(1121802..1121993) 1 NC_002936.3 hypothetical protein 1121993 3229511 DET1221 Dehalococcoides ethenogenes 195 hypothetical protein YP_181934.1 1121802 R 243164 CDS YP_181935.1 57234044 3229510 1121974..1122336 1 NC_002936.3 identified by similarity to SP:Q45132; hypothetical protein 1122336 3229510 DET1222 Dehalococcoides ethenogenes 195 hypothetical protein YP_181935.1 1121974 D 243164 CDS YP_181936.1 57234043 3229509 complement(1122380..1123141) 1 NC_002936.3 identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase 1123141 3229509 DET1223 Dehalococcoides ethenogenes 195 fumarylacetoacetate hydrolase YP_181936.1 1122380 R 243164 CDS YP_181937.1 57234042 3229508 1123305..1123850 1 NC_002936.3 identified by similarity to GB:AAA71929.1; cob(I)alamin adenosyltransferase 1123850 cobA-3 3229508 cobA-3 Dehalococcoides ethenogenes 195 cob(I)alamin adenosyltransferase YP_181937.1 1123305 D 243164 CDS YP_181938.1 57234041 3229507 1123871..1124968 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0264; match to protein family HMM PF01950; hypothetical protein 1124968 3229507 DET1225 Dehalococcoides ethenogenes 195 hypothetical protein YP_181938.1 1123871 D 243164 CDS YP_181939.1 57234033 3229499 1124972..1125571 1 NC_002936.3 identified by match to protein family HMM TIGR00042; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1125571 3229499 DET1226 Dehalococcoides ethenogenes 195 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_181939.1 1124972 D 243164 CDS YP_181940.1 57234032 3229498 1125734..1126870 1 NC_002936.3 identified by similarity to SP:P05649; match to protein family HMM TIGR00663; DNA polymerase III, beta subunit 1126870 dnaN 3229498 dnaN Dehalococcoides ethenogenes 195 DNA polymerase III, beta subunit YP_181940.1 1125734 D 243164 CDS YP_181941.1 57234031 3229497 complement(1126845..1127027) 1 NC_002936.3 hypothetical protein 1127027 3229497 DET1228 Dehalococcoides ethenogenes 195 hypothetical protein YP_181941.1 1126845 R 243164 CDS YP_181942.1 57234030 3229496 1127479..1127622 1 NC_002936.3 hypothetical protein 1127622 3229496 DET1229 Dehalococcoides ethenogenes 195 hypothetical protein YP_181942.1 1127479 D 243164 CDS YP_181943.1 57234029 3229495 complement(1127624..1127833) 1 NC_002936.3 identified by similarity to GP:22652039; hypothetical protein 1127833 3229495 DET1230 Dehalococcoides ethenogenes 195 hypothetical protein YP_181943.1 1127624 R 243164 CDS YP_181944.1 57234028 3229494 1128024..1128701 1 NC_002936.3 DNA-binding response regulator 1128701 3229494 DET1231 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_181944.1 1128024 D 243164 CDS YP_181945.1 57234027 3229493 complement(1128935..1130281) 1 NC_002936.3 sensor histidine kinase 1130281 3229493 DET1232 Dehalococcoides ethenogenes 195 sensor histidine kinase YP_181945.1 1128935 R 243164 CDS YP_181946.1 57234026 3229492 complement(1130278..1130946) 1 NC_002936.3 DNA-binding response regulator 1130946 3229492 DET1233 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_181946.1 1130278 R 243164 CDS YP_181947.1 57234017 3229483 1131093..1131764 1 NC_002936.3 hypothetical protein 1131764 3229483 DET1234 Dehalococcoides ethenogenes 195 hypothetical protein YP_181947.1 1131093 D 243164 CDS YP_181948.1 57234016 3229482 1132070..1132432 1 NC_002936.3 identified by similarity to OMNI:NTL02LI2731; hypothetical protein 1132432 3229482 DET1235 Dehalococcoides ethenogenes 195 hypothetical protein YP_181948.1 1132070 D 243164 CDS YP_181949.1 57234015 3229481 complement(1132710..1132943) 1 NC_002936.3 hypothetical protein 1132943 3229481 DET1236 Dehalococcoides ethenogenes 195 hypothetical protein YP_181949.1 1132710 R 243164 CDS YP_181950.1 57234014 3229480 1132917..1133771 1 NC_002936.3 identified by similarity to SP:P37051; match to protein family HMM TIGR00655; formyltetrahydrofolate deformylase 1133771 purU 3229480 purU Dehalococcoides ethenogenes 195 formyltetrahydrofolate deformylase YP_181950.1 1132917 D 243164 CDS YP_181951.1 57234013 3229479 1133960..1134778 1 NC_002936.3 lipoprotein 1134778 3229479 DET1238 Dehalococcoides ethenogenes 195 lipoprotein YP_181951.1 1133960 D 243164 CDS YP_181952.1 57234012 3229478 complement(1134794..1134919) 1 NC_002936.3 hypothetical protein 1134919 3229478 DET1239 Dehalococcoides ethenogenes 195 hypothetical protein YP_181952.1 1134794 R 243164 CDS YP_181953.1 57234011 3229477 1134961..1135590 1 NC_002936.3 identified by similarity to SP:P87051; cyclophilin type peptidyl-prolyl cis-trans isomerase 1135590 3229477 DET1240 Dehalococcoides ethenogenes 195 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_181953.1 1134961 D 243164 CDS YP_181954.1 57234010 3229476 complement(1135668..1136198) 1 NC_002936.3 identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401; peptide methionine sulfoxide reductase MsrA 1136198 msrA 3229476 msrA Dehalococcoides ethenogenes 195 peptide methionine sulfoxide reductase MsrA YP_181954.1 1135668 R 243164 CDS YP_181955.1 57234000 3229465 1136581..1136682 1 NC_002936.3 hypothetical protein 1136682 3229465 DET1243 Dehalococcoides ethenogenes 195 hypothetical protein YP_181955.1 1136581 D 243164 CDS YP_181956.1 57233999 3229464 complement(1136700..1137272) 1 NC_002936.3 NADPH-dependent FMN reductase 1137272 3229464 DET1244 Dehalococcoides ethenogenes 195 NADPH-dependent FMN reductase YP_181956.1 1136700 R 243164 CDS YP_181957.1 57233998 3229463 complement(1137561..1137890) 1 NC_002936.3 identified by similarity to GP:28806015; TfoX domain-containing protein 1137890 3229463 DET1245 Dehalococcoides ethenogenes 195 TfoX domain-containing protein YP_181957.1 1137561 R 243164 CDS YP_181958.1 57233997 3229462 complement(1137911..1138378) 1 NC_002936.3 hypothetical protein 1138378 3229462 DET1246 Dehalococcoides ethenogenes 195 hypothetical protein YP_181958.1 1137911 R 243164 CDS YP_181959.1 57233996 3229461 1138637..1138933 1 NC_002936.3 ArsR family transcriptional regulator 1138933 3229461 DET1247 Dehalococcoides ethenogenes 195 ArsR family transcriptional regulator YP_181959.1 1138637 D 243164 CDS YP_181960.1 57233995 3229460 1138936..1139601 1 NC_002936.3 hypothetical protein 1139601 3229460 DET1248 Dehalococcoides ethenogenes 195 hypothetical protein YP_181960.1 1138936 D 243164 CDS YP_181961.1 57233994 3229459 complement(1139621..1139761) 1 NC_002936.3 hypothetical protein 1139761 3229459 DET1249 Dehalococcoides ethenogenes 195 hypothetical protein YP_181961.1 1139621 R 243164 CDS YP_181962.1 57233993 3229458 1139742..1139936 1 NC_002936.3 identified by similarity to GP:11493843; hypothetical protein 1139936 3229458 DET1250 Dehalococcoides ethenogenes 195 hypothetical protein YP_181962.1 1139742 D 243164 CDS YP_181963.1 57233983 3229448 complement(1139949..1140509) 1 NC_002936.3 NADPH-dependent FMN reductase 1140509 3229448 DET1251 Dehalococcoides ethenogenes 195 NADPH-dependent FMN reductase YP_181963.1 1139949 R 243164 CDS YP_181964.1 57233982 3229447 1140613..1140858 1 NC_002936.3 hypothetical protein 1140858 3229447 DET1252 Dehalococcoides ethenogenes 195 hypothetical protein YP_181964.1 1140613 D 243164 CDS YP_181965.1 57233981 3229446 1141004..1141204 1 NC_002936.3 hypothetical protein 1141204 3229446 DET1253 Dehalococcoides ethenogenes 195 hypothetical protein YP_181965.1 1141004 D 243164 CDS YP_181966.1 57233980 3229445 complement(1141209..1141301) 1 NC_002936.3 hypothetical protein 1141301 3229445 DET1254 Dehalococcoides ethenogenes 195 hypothetical protein YP_181966.1 1141209 R 243164 CDS YP_181967.1 57233979 3229444 1141429..1142505 1 NC_002936.3 identified by similarity to SP:P24559; match to protein family HMM TIGR01420; twitching mobility protein 1142505 pilT-2 3229444 pilT-2 Dehalococcoides ethenogenes 195 twitching mobility protein YP_181967.1 1141429 D 243164 CDS YP_181968.1 57233978 3229443 1142595..1143812 1 NC_002936.3 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1143812 argJ 3229443 argJ Dehalococcoides ethenogenes 195 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_181968.1 1142595 D 243164 CDS YP_181969.1 57233977 3229442 1143819..1144637 1 NC_002936.3 identified by match to protein family HMM TIGR00761; acetylglutamate kinase 1144637 argB 3229442 argB Dehalococcoides ethenogenes 195 acetylglutamate kinase YP_181969.1 1143819 D 243164 CDS YP_181970.1 57233976 3229441 1144710..1145906 1 NC_002936.3 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1145906 argD 3229441 argD Dehalococcoides ethenogenes 195 acetylornithine aminotransferase YP_181970.1 1144710 D 243164 CDS YP_181971.1 57233966 3229431 1145913..1146803 1 NC_002936.3 hypothetical protein 1146803 3229431 DET1259 Dehalococcoides ethenogenes 195 hypothetical protein YP_181971.1 1145913 D 243164 CDS YP_181972.1 57233965 3229430 1146867..1148087 1 NC_002936.3 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1148087 argG 3229430 argG Dehalococcoides ethenogenes 195 argininosuccinate synthase YP_181972.1 1146867 D 243164 CDS YP_181973.1 57233964 3229429 1148088..1149473 1 NC_002936.3 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1149473 argH 3229429 argH Dehalococcoides ethenogenes 195 argininosuccinate lyase YP_181973.1 1148088 D 243164 CDS YP_181974.1 57233963 3229428 complement(1149483..1149671) 1 NC_002936.3 required for 70S ribosome assembly; 50S ribosomal protein L28 1149671 rpmB 3229428 rpmB Dehalococcoides ethenogenes 195 50S ribosomal protein L28 YP_181974.1 1149483 R 243164 CDS YP_181975.1 57233962 3229427 1149800..1151434 1 NC_002936.3 DAK2 domain-containing protein 1151434 3229427 DET1263 Dehalococcoides ethenogenes 195 DAK2 domain-containing protein YP_181975.1 1149800 D 243164 CDS YP_181976.1 57233961 3229426 1151444..1152283 1 NC_002936.3 identified by similarity to GP:28202560; match to protein family HMM TIGR00762; degV family protein 1152283 3229426 DET1264 Dehalococcoides ethenogenes 195 degV family protein YP_181976.1 1151444 D 243164 CDS YP_181977.1 57233960 3229425 1152300..1153145 1 NC_002936.3 identified by similarity to GP:29895885; match to protein family HMM TIGR00762; degV family protein 1153145 3229425 DET1265 Dehalococcoides ethenogenes 195 degV family protein YP_181977.1 1152300 D 243164 CDS YP_181978.1 57233959 3229424 1153182..1154012 1 NC_002936.3 identified by similarity to SP:P70945; match to protein family HMM TIGR00762; degV family protein 1154012 3229424 DET1266 Dehalococcoides ethenogenes 195 degV family protein YP_181978.1 1153182 D 243164 CDS YP_181979.1 57233958 3229423 1154042..1154977 1 NC_002936.3 identified by similarity to GP:28202560; match to protein family HMM PF02645; match to protein family HMM TIGR00762; degV family protein 1154977 3229423 DET1267 Dehalococcoides ethenogenes 195 degV family protein YP_181979.1 1154042 D 243164 CDS YP_181980.1 57233949 3229414 1155331..1157553 1 NC_002936.3 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1157553 recG 3229414 recG Dehalococcoides ethenogenes 195 ATP-dependent DNA helicase RecG YP_181980.1 1155331 D 243164 CDS YP_181981.1 57233948 3229413 1157561..1158259 1 NC_002936.3 HNH endonuclease domain-containing protein 1158259 3229413 DET1269 Dehalococcoides ethenogenes 195 HNH endonuclease domain-containing protein YP_181981.1 1157561 D 243164 CDS YP_181982.1 57233947 3229412 1158377..1160047 1 NC_002936.3 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1160047 argS 3229412 argS Dehalococcoides ethenogenes 195 arginyl-tRNA synthetase YP_181982.1 1158377 D 243164 CDS YP_181983.1 57233946 3229411 complement(1160127..1160357) 1 NC_002936.3 identified by similarity to GB:CAA22404.1; hypothetical protein 1160357 3229411 DET1271 Dehalococcoides ethenogenes 195 hypothetical protein YP_181983.1 1160127 R 243164 CDS YP_181984.1 57233945 3229410 1160518..1161357 1 NC_002936.3 identified by similarity to SP:P16657; enoyl-ACP reductase 1161357 3229410 DET1272 Dehalococcoides ethenogenes 195 enoyl-ACP reductase YP_181984.1 1160518 D 243164 CDS YP_181985.1 57233944 3229409 1161387..1161590 1 NC_002936.3 hypothetical protein 1161590 3229409 DET1273 Dehalococcoides ethenogenes 195 hypothetical protein YP_181985.1 1161387 D 243164 CDS YP_181986.1 57233943 3229408 1161667..1162110 1 NC_002936.3 identified by similarity to GP:28203367; hypothetical protein 1162110 3229408 DET1274 Dehalococcoides ethenogenes 195 hypothetical protein YP_181986.1 1161667 D 243164 CDS YP_181987.1 57233942 3229407 1162115..1162333 1 NC_002936.3 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1162333 rpmF 3229407 rpmF Dehalococcoides ethenogenes 195 50S ribosomal protein L32 YP_181987.1 1162115 D 243164 CDS YP_181988.1 57233934 3229399 1162357..1163289 1 NC_002936.3 identified by similarity to SP:P71019; match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-ACP transacylase 1163289 fabD 3229399 fabD Dehalococcoides ethenogenes 195 malonyl CoA-ACP transacylase YP_181988.1 1162357 D 243164 CDS YP_181989.1 57233933 3229398 1163298..1164041 1 NC_002936.3 identified by match to protein family HMM TIGR01830; 3-oxoacyl-ACP reductase 1164041 fabG 3229398 fabG Dehalococcoides ethenogenes 195 3-oxoacyl-ACP reductase YP_181989.1 1163298 D 243164 CDS YP_181990.1 57233932 3229397 1164053..1164484 1 NC_002936.3 identified by similarity to SP:P04381; match to protein family HMM PF01029; match to protein family HMM TIGR01951; N utilization substance protein B 1164484 nusB 3229397 nusB Dehalococcoides ethenogenes 195 N utilization substance protein B YP_181990.1 1164053 D 243164 CDS YP_181991.1 57233931 3229396 1164489..1164749 1 NC_002936.3 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1164749 acpP 3229396 acpP Dehalococcoides ethenogenes 195 acyl carrier protein YP_181991.1 1164489 D 243164 CDS YP_181992.1 57233930 3229395 complement(1165012..1166523) 1 NC_002936.3 identified by similarity to OMNI:CT1903; radical SAM protein 1166523 3229395 DET1280 Dehalococcoides ethenogenes 195 radical SAM protein YP_181992.1 1165012 R 243164 CDS YP_181993.1 57233929 3229394 complement(1166595..1170041) 1 NC_002936.3 identified by match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580; transcription-repair coupling factor 1170041 mfd 3229394 mfd Dehalococcoides ethenogenes 195 transcription-repair coupling factor YP_181993.1 1166595 R 243164 CDS YP_181994.1 57233928 3229393 1170193..1171314 1 NC_002936.3 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1171314 proB 3229393 proB Dehalococcoides ethenogenes 195 gamma-glutamyl kinase YP_181994.1 1170193 D 243164 CDS YP_181995.1 57233920 3229385 1171327..1171593 1 NC_002936.3 hypothetical protein 1171593 3229385 DET1283 Dehalococcoides ethenogenes 195 hypothetical protein YP_181995.1 1171327 D 243164 CDS YP_181996.1 57233919 3229384 1171590..1171916 1 NC_002936.3 hypothetical protein 1171916 3229384 DET1284 Dehalococcoides ethenogenes 195 hypothetical protein YP_181996.1 1171590 D 243164 CDS YP_181997.1 57233918 3229383 complement(1171954..1173138) 1 NC_002936.3 identified by similarity to SP:O34358; serine protease 1173138 3229383 DET1285 Dehalococcoides ethenogenes 195 serine protease YP_181997.1 1171954 R 243164 CDS YP_181998.1 57233917 3229382 complement(1173221..1174039) 1 NC_002936.3 identified by similarity to SP:P09376; match to protein family HMM PF00089; serine protease 1174039 3229382 DET1286 Dehalococcoides ethenogenes 195 serine protease YP_181998.1 1173221 R 243164 CDS YP_181999.1 57233916 3229381 complement(1174249..1175001) 1 NC_002936.3 identified by similarity to SP:P32184; MerR family transcriptional regulator 1175001 3229381 DET1287 Dehalococcoides ethenogenes 195 MerR family transcriptional regulator YP_181999.1 1174249 R 243164 CDS YP_182000.1 57233915 3229380 1175125..1176399 1 NC_002936.3 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1176399 proA 3229380 proA Dehalococcoides ethenogenes 195 gamma-glutamyl phosphate reductase YP_182000.1 1175125 D 243164 CDS YP_182001.1 57233914 3229379 complement(1176486..1177205) 1 NC_002936.3 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 1177205 rph 3229379 rph Dehalococcoides ethenogenes 195 ribonuclease PH YP_182001.1 1176486 R 243164 CDS YP_182002.1 57233913 3229378 complement(1177283..1177699) 1 NC_002936.3 identified by match to protein family HMM PF00293; NUDIX domain-containing protein 1177699 3229378 DET1290 Dehalococcoides ethenogenes 195 NUDIX domain-containing protein YP_182002.1 1177283 R 243164 CDS YP_182003.1 57233904 3229369 complement(1177689..1178198) 1 NC_002936.3 identified by match to protein family HMM TIGR00199; competence/damage inducible protein CinA 1178198 3229369 DET1291 Dehalococcoides ethenogenes 195 competence/damage inducible protein CinA YP_182003.1 1177689 R 243164 CDS YP_182004.1 57235102 3230574 1178229..1178522 1 NC_002936.3 identified by similarity to SP:Q8EBY9; hypothetical protein 1178522 3230574 DET1292 Dehalococcoides ethenogenes 195 hypothetical protein YP_182004.1 1178229 D 243164 CDS YP_182005.1 57233903 3229368 complement(1178470..1179654) 1 NC_002936.3 identified by match to protein family HMM TIGR00229; sensory box sensor histidine kinase 1179654 3229368 DET1293 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_182005.1 1178470 R 243164 CDS YP_182006.1 57233902 3229367 complement(1179908..1180450) 1 NC_002936.3 identified by match to protein family HMM TIGR01764; DNA-binding response regulator 1180450 3229367 DET1294 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_182006.1 1179908 R 243164 CDS YP_182007.1 57233901 3229366 1180817..1181926 1 NC_002936.3 hypothetical protein 1181926 3229366 DET1295 Dehalococcoides ethenogenes 195 hypothetical protein YP_182007.1 1180817 D 243164 CDS YP_182008.1 57233900 3229365 complement(1182020..1182337) 1 NC_002936.3 identified by similarity to OMNI:NTL03CP0999; hypothetical protein 1182337 3229365 DET1296 Dehalococcoides ethenogenes 195 hypothetical protein YP_182008.1 1182020 R 243164 CDS YP_182009.1 57233899 3229364 complement(1182476..1182574) 1 NC_002936.3 hypothetical protein 1182574 3229364 DET1297 Dehalococcoides ethenogenes 195 hypothetical protein YP_182009.1 1182476 R 243164 CDS YP_182010.1 57233898 3229363 1182700..1184529 1 NC_002936.3 identified by match to protein family HMM TIGR00231; GTP-binding protein TypA 1184529 3229363 DET1298 Dehalococcoides ethenogenes 195 GTP-binding protein TypA YP_182010.1 1182700 D 243164 CDS YP_182011.1 57233897 3229362 complement(1184751..1186157) 1 NC_002936.3 identified by similarity to OMNI:NTL01RS0547; major facilitator family transporter 1186157 3229362 DET1299 Dehalococcoides ethenogenes 195 major facilitator family transporter YP_182011.1 1184751 R 243164 CDS YP_182012.1 57234004 3229470 complement(1186224..1186550) 1 NC_002936.3 universal stress protein 1186550 3229470 DET1300 Dehalococcoides ethenogenes 195 universal stress protein YP_182012.1 1186224 R 243164 CDS YP_182013.1 57234003 3229469 1186642..1187883 1 NC_002936.3 identified by similarity to GP:1477486; ISDet4, transposase 1187883 3229469 DET1301 Dehalococcoides ethenogenes 195 ISDet4, transposase YP_182013.1 1186642 D 243164 CDS YP_182014.1 57234002 3229468 1188117..1188236 1 NC_002936.3 hypothetical protein 1188236 3229468 DET1302 Dehalococcoides ethenogenes 195 hypothetical protein YP_182014.1 1188117 D 243164 CDS YP_182015.1 57234001 3229467 complement(1188774..1189178) 1 NC_002936.3 identified by match to protein family HMM PF02469; fasciclin domain-containing protein 1189178 3229467 DET1303 Dehalococcoides ethenogenes 195 fasciclin domain-containing protein YP_182015.1 1188774 R 243164 CDS YP_182016.1 57233992 3229457 complement(1189191..1189337) 1 NC_002936.3 hypothetical protein 1189337 3229457 DET1304 Dehalococcoides ethenogenes 195 hypothetical protein YP_182016.1 1189191 R 243164 CDS YP_182017.1 57233991 3229456 1189407..1189970 1 NC_002936.3 identified by similarity to GP:2959339; hypothetical protein 1189970 3229456 DET1305 Dehalococcoides ethenogenes 195 hypothetical protein YP_182017.1 1189407 D 243164 CDS YP_182018.1 57233990 3229455 complement(1190064..1190411) 1 NC_002936.3 hypothetical protein 1190411 3229455 DET1306 Dehalococcoides ethenogenes 195 hypothetical protein YP_182018.1 1190064 R 243164 CDS YP_182019.1 57233989 3229454 1190774..1190962 1 NC_002936.3 identified by similarity to OMNI:NTL01ATC0354; match to protein family HMM PF07411; hypothetical protein 1190962 3229454 DET1307 Dehalococcoides ethenogenes 195 hypothetical protein YP_182019.1 1190774 D 243164 CDS YP_182020.1 57233988 3229453 complement(1191051..1191878) 1 NC_002936.3 alpha/beta fold family hydrolase 1191878 3229453 DET1308 Dehalococcoides ethenogenes 195 alpha/beta fold family hydrolase YP_182020.1 1191051 R 243164 CDS YP_182021.1 57233987 3229452 complement(1191868..1193241) 1 NC_002936.3 recombination factor protein RarA 1193241 3229452 DET1309 Dehalococcoides ethenogenes 195 recombination factor protein RarA YP_182021.1 1191868 R 243164 CDS YP_182022.1 57233986 3229451 complement(1193213..1193761) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM3154; hypothetical protein 1193761 3229451 DET1310 Dehalococcoides ethenogenes 195 hypothetical protein YP_182022.1 1193213 R 243164 CDS YP_182023.1 57233985 3229450 complement(1193775..1194050) 1 NC_002936.3 hypothetical protein 1194050 3229450 DET1311 Dehalococcoides ethenogenes 195 hypothetical protein YP_182023.1 1193775 R 243164 CDS YP_182024.1 57233984 3229449 complement(1194052..1194189) 1 NC_002936.3 hypothetical protein 1194189 3229449 DET1312 Dehalococcoides ethenogenes 195 hypothetical protein YP_182024.1 1194052 R 243164 CDS YP_182025.1 57233975 3229440 complement(1194167..1195483) 1 NC_002936.3 identified by match to protein family HMM PF01871; match to protein family HMM PF01875; match to protein family HMM TIGR00296; hypothetical protein 1195483 3229440 DET1313 Dehalococcoides ethenogenes 195 hypothetical protein YP_182025.1 1194167 R 243164 CDS YP_182026.1 57233974 3229439 complement(1195483..1196520) 1 NC_002936.3 radical SAM domain-containing protein 1196520 3229439 DET1314 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_182026.1 1195483 R 243164 CDS YP_182027.1 57233973 3229438 complement(1196593..1197501) 1 NC_002936.3 hypothetical protein 1197501 3229438 DET1315 Dehalococcoides ethenogenes 195 hypothetical protein YP_182027.1 1196593 R 243164 CDS YP_182028.1 57233972 3229437 1197767..1197991 1 NC_002936.3 identified by similarity to GP:6723399; hypothetical protein 1197991 3229437 DET1317 Dehalococcoides ethenogenes 195 hypothetical protein YP_182028.1 1197767 D 243164 CDS YP_182029.1 57233971 3229436 complement(1198084..1198575) 1 NC_002936.3 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1198575 3229436 DET1318 Dehalococcoides ethenogenes 195 nucleotide-binding protein YP_182029.1 1198084 R 243164 CDS YP_182030.1 57233970 3229435 complement(1198659..1198817) 1 NC_002936.3 hypothetical protein 1198817 3229435 DET1319 Dehalococcoides ethenogenes 195 hypothetical protein YP_182030.1 1198659 R 243164 CDS YP_182031.1 57233969 3229434 complement(1199047..1199763) 1 NC_002936.3 identified by similarity to OMNI:NTL01BH0316; hypothetical protein 1199763 3229434 DET1320 Dehalococcoides ethenogenes 195 hypothetical protein YP_182031.1 1199047 R 243164 CDS YP_182032.1 57233968 3229433 complement(1199994..1200797) 1 NC_002936.3 identified by similarity to GP:29897287; acetyltransferase 1200797 3229433 DET1321 Dehalococcoides ethenogenes 195 acetyltransferase YP_182032.1 1199994 R 243164 CDS YP_182033.1 57233967 3229432 complement(1200945..1201166) 1 NC_002936.3 hypothetical protein 1201166 3229432 DET1322 Dehalococcoides ethenogenes 195 hypothetical protein YP_182033.1 1200945 R 243164 CDS YP_182034.1 57233957 3229422 1201421..1202017 1 NC_002936.3 identified by similarity to GP:28373853; match to protein family HMM TIGR00152; dephospho-CoA kinase 1202017 coaE 3229422 coaE Dehalococcoides ethenogenes 195 dephospho-CoA kinase YP_182034.1 1201421 D 243164 CDS YP_182035.1 57233956 3229421 complement(1201992..1202900) 1 NC_002936.3 identified by similarity to OMNI:DR1980; hypothetical protein 1202900 3229421 DET1324 Dehalococcoides ethenogenes 195 hypothetical protein YP_182035.1 1201992 R 243164 CDS YP_182036.1 57233955 3229420 1203133..1203531 1 NC_002936.3 identified by match to protein family HMM PF00829; 50S ribosomal protein L21 1203531 rplU 3229420 rplU Dehalococcoides ethenogenes 195 50S ribosomal protein L21 YP_182036.1 1203133 D 243164 CDS YP_182037.1 57233954 3229419 1203521..1203775 1 NC_002936.3 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1203775 rpmA 3229419 rpmA Dehalococcoides ethenogenes 195 50S ribosomal protein L27 YP_182037.1 1203521 D 243164 CDS YP_182038.1 57233953 3229418 1203782..1203988 1 NC_002936.3 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1203988 rpmE 3229418 rpmE Dehalococcoides ethenogenes 195 50S ribosomal protein L31 YP_182038.1 1203782 D 243164 CDS YP_182039.1 57233952 3229417 1204068..1204991 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0128; hypothetical protein 1204991 3229417 DET1328 Dehalococcoides ethenogenes 195 hypothetical protein YP_182039.1 1204068 D 243164 CDS YP_182040.1 57233951 3229416 complement(1204984..1205298) 1 NC_002936.3 identified by similarity to SP:P06989; match to protein family HMM PF01502; phosphoribosyl-AMP cyclohydrolase 1205298 hisI 3229416 hisI Dehalococcoides ethenogenes 195 phosphoribosyl-AMP cyclohydrolase YP_182040.1 1204984 R 243164 CDS YP_182041.1 57233950 3229415 1205429..1205887 1 NC_002936.3 identified by similarity to OMNI:NTL02MA1744; acetyltransferase 1205887 3229415 DET1330 Dehalococcoides ethenogenes 195 acetyltransferase YP_182041.1 1205429 D 243164 CDS YP_182042.1 57233941 3229406 complement(1205894..1206607) 1 NC_002936.3 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1206607 hisA 3229406 hisA Dehalococcoides ethenogenes 195 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_182042.1 1205894 R 243164 CDS YP_182043.1 57233940 3229405 complement(1206634..1206876) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM3337; hypothetical protein 1206876 3229405 DET1332 Dehalococcoides ethenogenes 195 hypothetical protein YP_182043.1 1206634 R 243164 CDS YP_182044.1 57233939 3229404 complement(1206956..1207336) 1 NC_002936.3 identified by similarity to OMNI:NTL01PA0538; hypothetical protein 1207336 3229404 DET1333 Dehalococcoides ethenogenes 195 hypothetical protein YP_182044.1 1206956 R 243164 CDS YP_182045.1 57233938 3229403 1207446..1207733 1 NC_002936.3 identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135; glutamyl-tRNA(Gln) amidotransferase, C subunit 1207733 gatC 3229403 gatC Dehalococcoides ethenogenes 195 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_182045.1 1207446 D 243164 CDS YP_182046.1 57233937 3229402 1207733..1209193 1 NC_002936.3 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1209193 gatA 3229402 gatA Dehalococcoides ethenogenes 195 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_182046.1 1207733 D 243164 CDS YP_182047.1 57233936 3229401 1209211..1209675 1 NC_002936.3 hypothetical protein 1209675 3229401 DET1336 Dehalococcoides ethenogenes 195 hypothetical protein YP_182047.1 1209211 D 243164 CDS YP_182048.1 57233935 3229400 1209799..1210173 1 NC_002936.3 identified by similarity to OMNI:NTL01MM0928; hypothetical protein 1210173 3229400 DET1337 Dehalococcoides ethenogenes 195 hypothetical protein YP_182048.1 1209799 D 243164 CDS YP_182049.1 57233927 3229392 1210179..1210388 1 NC_002936.3 identified by similarity to OMNI:MJ0272; DNA-binding protein 1210388 3229392 DET1338 Dehalococcoides ethenogenes 195 DNA-binding protein YP_182049.1 1210179 D 243164 CDS YP_182050.1 57233926 3229391 1210385..1211305 1 NC_002936.3 identified by similarity to OMNI:NTL02MA1555; ABC transporter ATP-binding protein 1211305 3229391 DET1339 Dehalococcoides ethenogenes 195 ABC transporter ATP-binding protein YP_182050.1 1210385 D 243164 CDS YP_182051.1 57233925 3229390 1211305..1212000 1 NC_002936.3 identified by similarity to OMNI:NTL01TT2342; ABC transporter, permease 1212000 3229390 DET1340 Dehalococcoides ethenogenes 195 ABC transporter, permease YP_182051.1 1211305 D 243164 CDS YP_182052.1 57233924 3229389 1212139..1212621 1 NC_002936.3 identified by similarity to SP:O07920; AsnC family transcriptional regulator 1212621 3229389 DET1341 Dehalococcoides ethenogenes 195 AsnC family transcriptional regulator YP_182052.1 1212139 D 243164 CDS YP_182053.1 57233923 3229388 1212644..1213840 1 NC_002936.3 identified by similarity to SP:P23034; aspartate aminotransferase 1213840 aspC 3229388 aspC Dehalococcoides ethenogenes 195 aspartate aminotransferase YP_182053.1 1212644 D 243164 CDS YP_182054.1 57233922 3229387 complement(1213922..1214893) 1 NC_002936.3 identified by match to protein family HMM TIGR00233; tryptophanyl-tRNA synthetase 1214893 trpS 3229387 trpS Dehalococcoides ethenogenes 195 tryptophanyl-tRNA synthetase YP_182054.1 1213922 R 243164 CDS YP_182055.1 57233921 3229386 complement(1214948..1215802) 1 NC_002936.3 identified by similarity to SP:P22565; match to protein family HMM PF02401; match to protein family HMM TIGR00216; hydroxymethylbutenyl pyrophosphate reductase 1215802 ispH 3229386 ispH Dehalococcoides ethenogenes 195 hydroxymethylbutenyl pyrophosphate reductase YP_182055.1 1214948 R 243164 CDS YP_182056.1 57233912 3229377 1215887..1216897 1 NC_002936.3 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase 1216897 3229377 DET1345 Dehalococcoides ethenogenes 195 tagatose 1,6-diphosphate aldolase YP_182056.1 1215887 D 243164 CDS YP_182057.1 57233911 3229376 1216894..1217826 1 NC_002936.3 carbohydrate kinase 1217826 3229376 DET1346 Dehalococcoides ethenogenes 195 carbohydrate kinase YP_182057.1 1216894 D 243164 CDS YP_182058.1 57233910 3229375 complement(1217830..1218690) 1 NC_002936.3 hypothetical protein 1218690 3229375 DET1347 Dehalococcoides ethenogenes 195 hypothetical protein YP_182058.1 1217830 R 243164 CDS YP_182059.1 57233909 3229374 complement(1218696..1219235) 1 NC_002936.3 identified by similarity to SP:Q45585; ECF subfamily RNA polymerase sigma factor 1219235 3229374 DET1348 Dehalococcoides ethenogenes 195 ECF subfamily RNA polymerase sigma factor YP_182059.1 1218696 R 243164 CDS YP_182060.1 57233908 3229373 1219598..1219816 1 NC_002936.3 identified by match to protein family HMM TIGR01764; excisionase DNA-binding protein 1219816 3229373 DET1349 Dehalococcoides ethenogenes 195 excisionase DNA-binding protein YP_182060.1 1219598 D 243164 CDS YP_182061.1 57233907 3229372 1219838..1220515 1 NC_002936.3 identified by similarity to SP:P13800; LuxR family DNA-binding response regulator 1220515 3229372 DET1350 Dehalococcoides ethenogenes 195 LuxR family DNA-binding response regulator YP_182061.1 1219838 D 243164 CDS YP_182062.1 57233906 3229371 1220622..1222958 1 NC_002936.3 identified by similarity to GP:4139237; match to protein family HMM PF05157; type II secretion system protein GspE 1222958 gspE 3229371 gspE Dehalococcoides ethenogenes 195 type II secretion system protein GspE YP_182062.1 1220622 D 243164 CDS YP_182063.1 57233905 3229370 1222968..1224173 1 NC_002936.3 identified by similarity to SP:P45793; pilin biogenesis protein 1224173 3229370 DET1352 Dehalococcoides ethenogenes 195 pilin biogenesis protein YP_182063.1 1222968 D 243164 CDS YP_182064.1 57233896 3229361 1224185..1224640 1 NC_002936.3 identified by similarity to SP:P15749; GspI/GspJ family type II secretion system protein 1224640 3229361 DET1353 Dehalococcoides ethenogenes 195 GspI/GspJ family type II secretion system protein YP_182064.1 1224185 D 243164 CDS YP_182065.1 57233895 3229360 1224637..1225191 1 NC_002936.3 identified by similarity to OMNI:NTL01XA0698; type II secretion system protein 1225191 3229360 DET1354 Dehalococcoides ethenogenes 195 type II secretion system protein YP_182065.1 1224637 D 243164 CDS YP_182066.1 57233894 3229359 1225222..1226349 1 NC_002936.3 hypothetical protein 1226349 3229359 DET1355 Dehalococcoides ethenogenes 195 hypothetical protein YP_182066.1 1225222 D 243164 CDS YP_182067.1 57233893 3229358 1226464..1227822 1 NC_002936.3 hypothetical protein 1227822 3229358 DET1356 Dehalococcoides ethenogenes 195 hypothetical protein YP_182067.1 1226464 D 243164 CDS YP_182068.1 57233892 3229357 1227832..1228407 1 NC_002936.3 hypothetical protein 1228407 3229357 DET1357 Dehalococcoides ethenogenes 195 hypothetical protein YP_182068.1 1227832 D 243164 CDS YP_182069.1 57233891 3229356 1228413..1229870 1 NC_002936.3 identified by similarity to OMNI:NTL03PA05045; type IV pilus assembly family protein 1229870 3229356 DET1358 Dehalococcoides ethenogenes 195 type IV pilus assembly family protein YP_182069.1 1228413 D 243164 CDS YP_182070.1 57233890 3229355 1229887..1231002 1 NC_002936.3 identified by similarity to SP:P24559; match to protein family HMM TIGR01420; twitching mobility protein 1231002 pilT-3 3229355 pilT-3 Dehalococcoides ethenogenes 195 twitching mobility protein YP_182070.1 1229887 D 243164 CDS YP_182071.1 57233889 3229354 complement(1231137..1231481) 1 NC_002936.3 identified by similarity to SP:P45773; general secretion protein 1231481 3229354 DET1360 Dehalococcoides ethenogenes 195 general secretion protein YP_182071.1 1231137 R 243164 CDS YP_182072.1 57233888 3229353 complement(1231597..1231695) 1 NC_002936.3 hypothetical protein 1231695 3229353 DET1361 Dehalococcoides ethenogenes 195 hypothetical protein YP_182072.1 1231597 R 243164 CDS YP_182073.1 57233881 3229345 1231704..1232471 1 NC_002936.3 identified by similarity to SP:P15378; type IV prepilin leader peptidase 1232471 3229345 DET1362 Dehalococcoides ethenogenes 195 type IV prepilin leader peptidase YP_182073.1 1231704 D 243164 CDS YP_182074.1 57233880 3229344 1232590..1234674 1 NC_002936.3 catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; functions in mannosylglycerate biosynthesis; bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase 1234674 mpgSP 3229344 mpgSP Dehalococcoides ethenogenes 195 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase YP_182074.1 1232590 D 243164 CDS YP_182075.1 57233879 3229343 1234841..1235341 1 NC_002936.3 identified by similarity to GP:1100876; hypothetical protein 1235341 3229343 DET1364 Dehalococcoides ethenogenes 195 hypothetical protein YP_182075.1 1234841 D 243164 CDS YP_182076.1 57233878 3229342 1235401..1236855 1 NC_002936.3 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1236855 gltX 3229342 gltX Dehalococcoides ethenogenes 195 glutamyl-tRNA synthetase YP_182076.1 1235401 D 243164 CDS YP_182077.1 57233877 3229341 complement(1236939..1237202) 1 NC_002936.3 hypothetical protein 1237202 3229341 DET1366 Dehalococcoides ethenogenes 195 hypothetical protein YP_182077.1 1236939 R 243164 CDS YP_182078.1 57233876 3229340 1237220..1237477 1 NC_002936.3 hypothetical protein 1237477 3229340 DET1367 Dehalococcoides ethenogenes 195 hypothetical protein YP_182078.1 1237220 D 243164 CDS YP_182079.1 57233875 3229339 1237479..1238483 1 NC_002936.3 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1238483 3229339 DET1368 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_182079.1 1237479 D 243164 CDS YP_182080.1 57233866 3229330 complement(1238502..1238651) 1 NC_002936.3 hypothetical protein 1238651 3229330 DET1369 Dehalococcoides ethenogenes 195 hypothetical protein YP_182080.1 1238502 R 243164 CDS YP_182081.1 57233865 3229329 1238753..1239271 1 NC_002936.3 identified by similarity to SP:Q9KD56; match to protein family HMM PF02130; match to protein family HMM TIGR00043; hypothetical protein 1239271 3229329 DET1370 Dehalococcoides ethenogenes 195 hypothetical protein YP_182081.1 1238753 D 243164 CDS YP_182082.1 57233864 3229328 1239268..1239840 1 NC_002936.3 NADPH-dependent FMN reductase 1239840 3229328 DET1371 Dehalococcoides ethenogenes 195 NADPH-dependent FMN reductase YP_182082.1 1239268 D 243164 CDS YP_182083.1 57233863 3229327 complement(1239842..1240774) 1 NC_002936.3 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1240774 pyrD 3229327 pyrD Dehalococcoides ethenogenes 195 dihydroorotate dehydrogenase 1B YP_182083.1 1239842 R 243164 CDS YP_182084.1 57233862 3229326 1241115..1241486 1 NC_002936.3 identified by similarity to SP:P18274; match to protein family HMM PF01258; dnaK suppressor protein 1241486 3229326 DET1373 Dehalococcoides ethenogenes 195 dnaK suppressor protein YP_182084.1 1241115 D 243164 CDS YP_182085.1 57233861 3229325 1241512..1241994 1 NC_002936.3 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1241994 lspA 3229325 lspA Dehalococcoides ethenogenes 195 lipoprotein signal peptidase YP_182085.1 1241512 D 243164 CDS YP_182086.1 57233860 3229324 1241981..1242883 1 NC_002936.3 identified by match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 1242883 3229324 DET1375 Dehalococcoides ethenogenes 195 ribosomal large subunit pseudouridine synthase D YP_182086.1 1241981 D 243164 CDS YP_182087.1 57233859 3229323 1242984..1243265 1 NC_002936.3 identified by similarity to OMNI:AF1663; hypothetical protein 1243265 3229323 DET1376 Dehalococcoides ethenogenes 195 hypothetical protein YP_182087.1 1242984 D 243164 CDS YP_182088.1 57233858 3229322 1243293..1243703 1 NC_002936.3 hypothetical protein 1243703 3229322 DET1377 Dehalococcoides ethenogenes 195 hypothetical protein YP_182088.1 1243293 D 243164 CDS YP_182089.1 57233857 3229321 1243822..1244433 1 NC_002936.3 hypothetical protein 1244433 3229321 DET1378 Dehalococcoides ethenogenes 195 hypothetical protein YP_182089.1 1243822 D 243164 CDS YP_182090.1 57233887 3229352 1244430..1246061 1 NC_002936.3 auxin-responsive GH3 protein homolog 1246061 3229352 DET1379 Dehalococcoides ethenogenes 195 auxin-responsive GH3 protein homolog YP_182090.1 1244430 D 243164 CDS YP_182091.1 57233886 3229351 complement(1246197..1246376) 1 NC_002936.3 hypothetical protein 1246376 3229351 DET1380 Dehalococcoides ethenogenes 195 hypothetical protein YP_182091.1 1246197 R 243164 CDS YP_182092.1 57233885 3229350 1246384..1248762 1 NC_002936.3 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; match to protein family HMM TIGR00277; diguanylate cyclase 1248762 3229350 DET1381 Dehalococcoides ethenogenes 195 diguanylate cyclase YP_182092.1 1246384 D 243164 CDS YP_182093.1 57233884 3229349 complement(1248811..1249668) 1 NC_002936.3 identified by match to protein family HMM TIGR00078; nicotinate-nucleotide pyrophosphorylase 1249668 nadC 3229349 nadC Dehalococcoides ethenogenes 195 nicotinate-nucleotide pyrophosphorylase YP_182093.1 1248811 R 243164 CDS YP_182094.1 57233883 3229347 complement(1251240..1251518) 1 NC_002936.3 identified by match to protein family HMM TIGR00739; preprotein translocase, YajC subunit 1251518 yajC 3229347 yajC Dehalococcoides ethenogenes 195 preprotein translocase, YajC subunit YP_182094.1 1251240 R 243164 CDS YP_182095.1 57233882 3229346 complement(1251529..1252785) 1 NC_002936.3 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1252785 miaB 3229346 miaB Dehalococcoides ethenogenes 195 (dimethylallyl)adenosine tRNA methylthiotransferase YP_182095.1 1251529 R 243164 CDS YP_182096.1 57233874 3229338 1252950..1253981 1 NC_002936.3 identified by similarity to OMNI:CC0674; hypothetical protein 1253981 3229338 DET1386 Dehalococcoides ethenogenes 195 hypothetical protein YP_182096.1 1252950 D 243164 CDS YP_182097.1 57233873 3229337 complement(1254114..1254674) 1 NC_002936.3 identified by similarity to OMNI:SP0830; hypothetical protein 1254674 3229337 DET1387 Dehalococcoides ethenogenes 195 hypothetical protein YP_182097.1 1254114 R 243164 CDS YP_182098.1 57233872 3229336 complement(1255053..1255865) 1 NC_002936.3 identified by match to protein family HMM PF01149; match to protein family HMM TIGR00577; formamidopyrimidine-DNA glycosylase 1255865 mutM 3229336 mutM Dehalococcoides ethenogenes 195 formamidopyrimidine-DNA glycosylase YP_182098.1 1255053 R 243164 CDS YP_182099.1 57233871 3229335 complement(1255858..1256481) 1 NC_002936.3 PAP2 family protein 1256481 3229335 DET1390 Dehalococcoides ethenogenes 195 PAP2 family protein YP_182099.1 1255858 R 243164 CDS YP_182100.1 57233870 3229334 complement(1256490..1259201) 1 NC_002936.3 identified by similarity to SP:O08307; match to protein family HMM PF01367; match to protein family HMM PF01612; match to protein family HMM TIGR00593; DNA-directed DNA polymerase I 1259201 polA 3229334 polA Dehalococcoides ethenogenes 195 DNA-directed DNA polymerase I YP_182100.1 1256490 R 243164 CDS YP_182101.1 57233869 3229333 complement(1259268..1259702) 1 NC_002936.3 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1259702 3229333 DET1392 Dehalococcoides ethenogenes 195 rhodanese-like domain-containing protein YP_182101.1 1259268 R 243164 CDS YP_182102.1 57233868 3229332 complement(1259706..1260284) 1 NC_002936.3 hypothetical protein 1260284 3229332 DET1393 Dehalococcoides ethenogenes 195 hypothetical protein YP_182102.1 1259706 R 243164 CDS YP_182103.1 57233867 3229331 1260764..1261699 1 NC_002936.3 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1261699 argF 3229331 argF Dehalococcoides ethenogenes 195 ornithine carbamoyltransferase YP_182103.1 1260764 D 243164 CDS YP_182104.1 57233850 3229314 1261715..1263040 1 NC_002936.3 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1263040 engA 3229314 engA Dehalococcoides ethenogenes 195 GTP-binding protein EngA YP_182104.1 1261715 D 243164 CDS YP_182105.1 57233849 3229313 1263034..1263684 1 NC_002936.3 identified by similarity to SP:Q8R9J2; membrane protein 1263684 3229313 DET1396 Dehalococcoides ethenogenes 195 membrane protein YP_182105.1 1263034 D 243164 CDS YP_182106.1 57233848 3229312 1263733..1264812 1 NC_002936.3 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1264812 gpsA 3229312 gpsA Dehalococcoides ethenogenes 195 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_182106.1 1263733 D 243164 CDS YP_182107.1 57233847 3229311 complement(1264829..1265899) 1 NC_002936.3 identified by similarity to SP:P08622; match to protein family HMM PF01556; co-chaperone protein DnaJ 1265899 dnaJ 3229311 dnaJ Dehalococcoides ethenogenes 195 co-chaperone protein DnaJ YP_182107.1 1264829 R 243164 CDS YP_182108.1 57233846 3229310 complement(1266052..1267965) 1 NC_002936.3 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1267965 dnaK 3229310 dnaK Dehalococcoides ethenogenes 195 molecular chaperone DnaK YP_182108.1 1266052 R 243164 CDS YP_182109.1 57233845 3229309 complement(1268001..1268564) 1 NC_002936.3 identified by similarity to SP:P15874; co-chaperone protein GrpE 1268564 grpE 3229309 grpE Dehalococcoides ethenogenes 195 co-chaperone protein GrpE YP_182109.1 1268001 R 243164 CDS YP_182110.1 57233844 3229308 complement(1268611..1269648) 1 NC_002936.3 identified by similarity to SP:P25499; match to protein family HMM PF01628; heat-inducible transcription repressor HrcA 1269648 3229308 DET1401 Dehalococcoides ethenogenes 195 heat-inducible transcription repressor HrcA YP_182110.1 1268611 R 243164 CDS YP_182111.1 57233843 3229307 1269813..1270445 1 NC_002936.3 identified by similarity to OMNI:TM0207; hypothetical protein 1270445 3229307 DET1402 Dehalococcoides ethenogenes 195 hypothetical protein YP_182111.1 1269813 D 243164 CDS YP_182112.1 57233833 3229297 1270486..1272015 1 NC_002936.3 identified by similarity to GP:28058107; hypothetical protein 1272015 3229297 DET1403 Dehalococcoides ethenogenes 195 hypothetical protein YP_182112.1 1270486 D 243164 CDS YP_182113.1 57233832 3229296 1272059..1272556 1 NC_002936.3 identified by similarity to OMNI:NTL01HS00937; hypothetical protein 1272556 3229296 DET1404 Dehalococcoides ethenogenes 195 hypothetical protein YP_182113.1 1272059 D 243164 CDS YP_182114.1 57233831 3229295 complement(1272585..1272734) 1 NC_002936.3 hypothetical protein 1272734 3229295 DET1405 Dehalococcoides ethenogenes 195 hypothetical protein YP_182114.1 1272585 R 243164 CDS YP_182115.1 57233830 3229294 complement(1272745..1272846) 1 NC_002936.3 hypothetical protein 1272846 3229294 DET1406 Dehalococcoides ethenogenes 195 hypothetical protein YP_182115.1 1272745 R 243164 CDS YP_182116.1 57233829 3229293 complement(1273062..1276067) 1 NC_002936.3 identified by similarity to GP:5305639; match to protein family HMM PF02012; BNR/Asp-box repeat-containing protein 1276067 3229293 DET1407 Dehalococcoides ethenogenes 195 BNR/Asp-box repeat-containing protein YP_182116.1 1273062 R 243164 CDS YP_182117.1 57233828 3229291 complement(1277703..1278353) 1 NC_002936.3 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 1278353 3229291 DET1409 Dehalococcoides ethenogenes 195 translaldolase YP_182117.1 1277703 R 243164 CDS YP_182118.1 57233827 3229290 complement(1278391..1280025) 1 NC_002936.3 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1280025 pyrG 3229290 pyrG Dehalococcoides ethenogenes 195 CTP synthetase YP_182118.1 1278391 R 243164 CDS YP_182119.1 57233813 3229276 1280306..1281298 1 NC_002936.3 identified by similarity to SP:P08622; match to protein family HMM PF00226; DnaJ family protein 1281298 3229276 DET1411 Dehalococcoides ethenogenes 195 DnaJ family protein YP_182119.1 1280306 D 243164 CDS YP_182120.1 57233812 3229275 1281311..1281616 1 NC_002936.3 identified by similarity to SP:P40183; HspR protein 1281616 3229275 DET1412 Dehalococcoides ethenogenes 195 HspR protein YP_182120.1 1281311 D 243164 CDS YP_182121.1 57233811 3229274 1281621..1284059 1 NC_002936.3 identified by similarity to SP:P37571; match to protein family HMM PF00004; match to protein family HMM PF02861; chaperone ClpB 1284059 clpB 3229274 clpB Dehalococcoides ethenogenes 195 chaperone ClpB YP_182121.1 1281621 D 243164 CDS YP_182122.1 57233810 3229273 1284179..1284730 1 NC_002936.3 identified by similarity to GP:10198137; hypothetical protein 1284730 3229273 DET1414 Dehalococcoides ethenogenes 195 hypothetical protein YP_182122.1 1284179 D 243164 CDS YP_182123.1 57233809 3229272 1284819..1286237 1 NC_002936.3 identified by similarity to SP:P00497; match to protein family HMM TIGR01134; amidophosphoribosyltransferase 1286237 purF 3229272 purF Dehalococcoides ethenogenes 195 amidophosphoribosyltransferase YP_182123.1 1284819 D 243164 CDS YP_182124.1 57233808 3229271 1286352..1287374 1 NC_002936.3 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1287374 purM 3229271 purM Dehalococcoides ethenogenes 195 phosphoribosylaminoimidazole synthetase YP_182124.1 1286352 D 243164 CDS YP_182125.1 57233807 3229270 1287504..1289045 1 NC_002936.3 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1289045 purH 3229270 purH Dehalococcoides ethenogenes 195 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_182125.1 1287504 D 243164 CDS YP_182126.1 57233798 3229261 1289063..1290064 1 NC_002936.3 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1290064 3229261 DET1418 Dehalococcoides ethenogenes 195 nicotinate phosphoribosyltransferase YP_182126.1 1289063 D 243164 CDS YP_182127.1 57233797 3229260 1290183..1290431 1 NC_002936.3 identified by similarity to SP:O29774; match to protein family HMM TIGR01439; AbrB family transcriptional regulator 1290431 3229260 DET1419 Dehalococcoides ethenogenes 195 AbrB family transcriptional regulator YP_182127.1 1290183 D 243164 CDS YP_182128.1 57233796 3229259 1290435..1291277 1 NC_002936.3 in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine; arsenite S-adenosylmethyltransferase 1291277 arsM 3229259 arsM Dehalococcoides ethenogenes 195 arsenite S-adenosylmethyltransferase YP_182128.1 1290435 D 243164 CDS YP_182129.1 57233795 3229258 complement(1291274..1292686) 1 NC_002936.3 PP-loop family protein 1292686 3229258 DET1421 Dehalococcoides ethenogenes 195 PP-loop family protein YP_182129.1 1291274 R 243164 CDS YP_182130.1 57233794 3229257 complement(1292748..1293371) 1 NC_002936.3 identified by match to protein family HMM PF00300; phosphoglycerate mutase 1293371 3229257 DET1422 Dehalococcoides ethenogenes 195 phosphoglycerate mutase YP_182130.1 1292748 R 243164 CDS YP_182131.1 57233793 3229256 complement(1293374..1294552) 1 NC_002936.3 identified by match to protein family HMM PF01435; M48 family peptidase 1294552 3229256 DET1423 Dehalococcoides ethenogenes 195 M48 family peptidase YP_182131.1 1293374 R 243164 CDS YP_182132.1 57233792 3229255 complement(1294552..1295196) 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0849; hypothetical protein 1295196 3229255 DET1424 Dehalococcoides ethenogenes 195 hypothetical protein YP_182132.1 1294552 R 243164 CDS YP_182133.1 57233791 3229254 complement(1295177..1296451) 1 NC_002936.3 identified by match to protein family HMM PF03471; hypothetical protein 1296451 3229254 DET1425 Dehalococcoides ethenogenes 195 hypothetical protein YP_182133.1 1295177 R 243164 CDS YP_182134.1 57233782 3229245 1296570..1297550 1 NC_002936.3 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1297550 gcp 3229245 gcp Dehalococcoides ethenogenes 195 DNA-binding/iron metalloprotein/AP endonuclease YP_182134.1 1296570 D 243164 CDS YP_182135.1 57233781 3229244 1298041..1298337 1 NC_002936.3 identified by similarity to SP:O50322; chaperonin GroES 1298337 groES 3229244 groES Dehalococcoides ethenogenes 195 chaperonin GroES YP_182135.1 1298041 D 243164 CDS YP_182136.1 57233780 3229243 1298365..1299978 1 NC_002936.3 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1299978 groEL 3229243 groEL Dehalococcoides ethenogenes 195 chaperonin GroEL YP_182136.1 1298365 D 243164 CDS YP_182137.1 57233779 3229242 complement(1300067..1301326) 1 NC_002936.3 identified by match to protein family HMM PF00675; M16 family peptidase 1301326 3229242 DET1429 Dehalococcoides ethenogenes 195 M16 family peptidase YP_182137.1 1300067 R 243164 CDS YP_182138.1 57233778 3229241 1301433..1301792 1 NC_002936.3 identified by similarity to SP:P24189; match to protein family HMM PF01155; match to protein family HMM TIGR00100; hydrogenase nickel insertion protein HypA 1301792 hypA 3229241 hypA Dehalococcoides ethenogenes 195 hydrogenase nickel insertion protein HypA YP_182138.1 1301433 D 243164 CDS YP_182139.1 57233777 3229240 1301773..1302426 1 NC_002936.3 identified by similarity to SP:Q43949; match to protein family HMM PF01495; match to protein family HMM TIGR00073; hydrogenase accessory protein HypB 1302426 hypB 3229240 hypB Dehalococcoides ethenogenes 195 hydrogenase accessory protein HypB YP_182139.1 1301773 D 243164 CDS YP_182140.1 57233776 3229239 1302427..1304718 1 NC_002936.3 identified by similarity to SP:O07451; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF 1304718 hypF 3229239 hypF Dehalococcoides ethenogenes 195 [NiFe] hydrogenase maturation protein HypF YP_182140.1 1302427 D 243164 CDS YP_182141.1 57233775 3229238 1304718..1304933 1 NC_002936.3 identified by similarity to GP:15430693; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC/HupF 1304933 hypC 3229238 hypC Dehalococcoides ethenogenes 195 hydrogenase assembly chaperone HypC/HupF YP_182141.1 1304718 D 243164 CDS YP_182142.1 57233766 3229229 1304937..1306031 1 NC_002936.3 identified by similarity to SP:P24192; match to protein family HMM PF01924; match to protein family HMM TIGR00075; hydrogenase expression/formation protein HypD 1306031 hypD 3229229 hypD Dehalococcoides ethenogenes 195 hydrogenase expression/formation protein HypD YP_182142.1 1304937 D 243164 CDS YP_182143.1 57233765 3229228 1306024..1307031 1 NC_002936.3 identified by similarity to SP:P40595; hydrogenase expression/formation protein HypE 1307031 hypE 3229228 hypE Dehalococcoides ethenogenes 195 hydrogenase expression/formation protein HypE YP_182143.1 1306024 D 243164 CDS YP_182144.1 57233764 3229227 1307196..1307573 1 NC_002936.3 TetR family transcriptional regulator 1307573 3229227 DET1436 Dehalococcoides ethenogenes 195 TetR family transcriptional regulator YP_182144.1 1307196 D 243164 CDS YP_182145.1 57233763 3229226 1307586..1307816 1 NC_002936.3 hypothetical protein 1307816 3229226 DET1437 Dehalococcoides ethenogenes 195 hypothetical protein YP_182145.1 1307586 D 243164 CDS YP_182146.1 57233762 3229225 1307826..1308149 1 NC_002936.3 hypothetical protein 1308149 3229225 DET1438 Dehalococcoides ethenogenes 195 hypothetical protein YP_182146.1 1307826 D 243164 CDS YP_182147.1 57233761 3229224 complement(1308641..1308799) 1 NC_002936.3 hypothetical protein 1308799 3229224 DET1443 Dehalococcoides ethenogenes 195 hypothetical protein YP_182147.1 1308641 R 243164 CDS YP_182148.1 57233760 3229223 1309438..1309995 1 NC_002936.3 identified by similarity to OMNI:EF1643; hypothetical protein 1309995 3229223 DET1445 Dehalococcoides ethenogenes 195 hypothetical protein YP_182148.1 1309438 D 243164 CDS YP_182149.1 57233759 3229222 complement(1310053..1310466) 1 NC_002936.3 identified by match to protein family HMM TIGR01764; excisionase DNA binding protein 1310466 3229222 DET1446 Dehalococcoides ethenogenes 195 excisionase DNA binding protein YP_182149.1 1310053 R 243164 CDS YP_182150.1 57233750 3229213 1310470..1310652 1 NC_002936.3 hypothetical protein 1310652 3229213 DET1447 Dehalococcoides ethenogenes 195 hypothetical protein YP_182150.1 1310470 D 243164 CDS YP_182151.1 57233749 3229212 complement(1310633..1310773) 1 NC_002936.3 hypothetical protein 1310773 3229212 DET1448 Dehalococcoides ethenogenes 195 hypothetical protein YP_182151.1 1310633 R 243164 CDS YP_182152.1 57233748 3229211 complement(1310864..1311475) 1 NC_002936.3 identified by match to protein family HMM TIGR00427; MarC membrane protein 1311475 3229211 DET1449 Dehalococcoides ethenogenes 195 MarC membrane protein YP_182152.1 1310864 R 243164 CDS YP_182153.1 57233747 3229210 1311590..1312036 1 NC_002936.3 identified by similarity to OMNI:NTL02ML0889; hypothetical protein 1312036 3229210 DET1450 Dehalococcoides ethenogenes 195 hypothetical protein YP_182153.1 1311590 D 243164 CDS YP_182154.1 57233746 3229209 complement(1312042..1313019) 1 NC_002936.3 hypothetical protein 1313019 3229209 DET1451 Dehalococcoides ethenogenes 195 hypothetical protein YP_182154.1 1312042 R 243164 CDS YP_182155.1 57233745 3229208 1313208..1313609 1 NC_002936.3 identified by similarity to OMNI:NTL03CP0412; hypothetical protein 1313609 3229208 DET1452 Dehalococcoides ethenogenes 195 hypothetical protein YP_182155.1 1313208 D 243164 CDS YP_182156.1 57233744 3229207 complement(1313716..1313886) 1 NC_002936.3 hypothetical protein 1313886 3229207 DET1453 Dehalococcoides ethenogenes 195 hypothetical protein YP_182156.1 1313716 R 243164 CDS YP_182157.1 57235101 3230573 1313785..1314441 1 NC_002936.3 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1314441 3230573 DET1454 Dehalococcoides ethenogenes 195 50S ribosomal protein L25/general stress protein Ctc YP_182157.1 1313785 D 243164 CDS YP_182158.1 57233743 3229206 1314455..1315303 1 NC_002936.3 hypothetical protein 1315303 3229206 DET1455 Dehalococcoides ethenogenes 195 hypothetical protein YP_182158.1 1314455 D 243164 CDS YP_182159.1 57233742 3229205 1315300..1315881 1 NC_002936.3 identified by similarity to OMNI:NTL01MM1820; match to protein family HMM PF02834; match to protein family HMM TIGR02258; 2'-5' RNA ligase 1315881 3229205 DET1456 Dehalococcoides ethenogenes 195 2'-5' RNA ligase YP_182159.1 1315300 D 243164 CDS YP_182160.1 57233733 3229196 1315953..1316156 1 NC_002936.3 hypothetical protein 1316156 3229196 DET1457 Dehalococcoides ethenogenes 195 hypothetical protein YP_182160.1 1315953 D 243164 CDS YP_182161.1 57233732 3229195 1316196..1316897 1 NC_002936.3 identified by similarity to SP:P39147; comF family protein 1316897 3229195 DET1458 Dehalococcoides ethenogenes 195 comF family protein YP_182161.1 1316196 D 243164 CDS YP_182162.1 57233731 3229194 1316911..1317450 1 NC_002936.3 identified by match to protein family HMM TIGR00741; ribosomal subunit interface protein 1317450 3229194 DET1459 Dehalococcoides ethenogenes 195 ribosomal subunit interface protein YP_182162.1 1316911 D 243164 CDS YP_182163.1 57233730 3229193 1317526..1318086 1 NC_002936.3 identified by match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 1318086 ogt 3229193 ogt Dehalococcoides ethenogenes 195 methylated-DNA--protein-cysteine methyltransferase YP_182163.1 1317526 D 243164 CDS YP_182164.1 57233729 3229192 complement(1318067..1318450) 1 NC_002936.3 lipoprotein 1318450 3229192 DET1461 Dehalococcoides ethenogenes 195 lipoprotein YP_182164.1 1318067 R 243164 CDS YP_182165.1 57233728 3229191 complement(1318473..1319288) 1 NC_002936.3 identified by match to protein family HMM TIGR00608; RadC family DNA repair protein 1319288 3229191 DET1462 Dehalococcoides ethenogenes 195 RadC family DNA repair protein YP_182165.1 1318473 R 243164 CDS YP_182166.1 57233856 3229320 complement(1319266..1319520) 1 NC_002936.3 hypothetical protein 1319520 3229320 DET1463 Dehalococcoides ethenogenes 195 hypothetical protein YP_182166.1 1319266 R 243164 CDS YP_182167.1 57233855 3229319 complement(1319504..1323016) 1 NC_002936.3 identified by match to protein family HMM TIGR00594; match to protein family HMM TIGR01369; DNA polymerase III, alpha subunit 1323016 dnaE 3229319 dnaE Dehalococcoides ethenogenes 195 DNA polymerase III, alpha subunit YP_182167.1 1319504 R 243164 CDS YP_182168.1 57233854 3229318 1323163..1323873 1 NC_002936.3 identified by similarity to OMNI:NTL01TT1854; match to protein family HMM TIGR01906; hypothetical protein 1323873 3229318 DET1465 Dehalococcoides ethenogenes 195 hypothetical protein YP_182168.1 1323163 D 243164 CDS YP_182169.1 57233853 3229317 complement(1323961..1324380) 1 NC_002936.3 hypothetical protein 1324380 3229317 DET1466 Dehalococcoides ethenogenes 195 hypothetical protein YP_182169.1 1323961 R 243164 CDS YP_182170.1 57233852 3229316 complement(1324362..1324484) 1 NC_002936.3 hypothetical protein 1324484 3229316 DET1467 Dehalococcoides ethenogenes 195 hypothetical protein YP_182170.1 1324362 R 243164 CDS YP_182171.1 57233851 3229315 complement(1324729..1324944) 1 NC_002936.3 identified by similarity to OMNI:TM1186; hypothetical protein 1324944 3229315 DET1468 Dehalococcoides ethenogenes 195 hypothetical protein YP_182171.1 1324729 R 243164 CDS YP_182172.1 57233842 3229306 1326822..1332326 1 NC_002936.3 identified by match to protein family HMM PF01436; match to protein family HMM TIGR01612; match to protein family HMM TIGR01643; NHL/RHS/YD repeat-containing protein 1332326 3229306 DET1472 Dehalococcoides ethenogenes 195 NHL/RHS/YD repeat-containing protein YP_182172.1 1326822 D 243164 CDS YP_182173.1 57233841 3229305 1332542..1332937 1 NC_002936.3 hypothetical protein 1332937 3229305 DET1473 Dehalococcoides ethenogenes 195 hypothetical protein YP_182173.1 1332542 D 243164 CDS YP_182174.1 57233840 3229304 complement(1333144..1334304) 1 NC_002936.3 phage integrase site specific recombinase 1334304 3229304 DET1474 Dehalococcoides ethenogenes 195 phage integrase site specific recombinase YP_182174.1 1333144 R 243164 CDS YP_182175.1 57233839 3229303 complement(1334301..1335137) 1 NC_002936.3 hypothetical protein 1335137 3229303 DET1475 Dehalococcoides ethenogenes 195 hypothetical protein YP_182175.1 1334301 R 243164 CDS YP_182176.1 57233838 3229302 1335264..1335434 1 NC_002936.3 identified by match to protein family HMM TIGR01764; DNA binding domain-containing protein 1335434 3229302 DET1476 Dehalococcoides ethenogenes 195 DNA binding domain-containing protein YP_182176.1 1335264 D 243164 CDS YP_182177.1 57233837 3229301 1335774..1336808 1 NC_002936.3 hypothetical protein 1336808 3229301 DET1477 Dehalococcoides ethenogenes 195 hypothetical protein YP_182177.1 1335774 D 243164 CDS YP_182178.1 57233836 3229300 1336905..1337738 1 NC_002936.3 hypothetical protein 1337738 3229300 DET1478 Dehalococcoides ethenogenes 195 hypothetical protein YP_182178.1 1336905 D 243164 CDS YP_182179.1 57233835 3229299 complement(1338418..1338525) 1 NC_002936.3 hypothetical protein 1338525 3229299 DET1479 Dehalococcoides ethenogenes 195 hypothetical protein YP_182179.1 1338418 R 243164 CDS YP_182180.1 57233834 3229298 1338557..1338781 1 NC_002936.3 hypothetical protein 1338781 3229298 DET1480 Dehalococcoides ethenogenes 195 hypothetical protein YP_182180.1 1338557 D 243164 CDS YP_182181.1 57233826 3229289 1339193..1340650 1 NC_002936.3 identified by similarity to PIR:A39128; match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00564; anthranilate synthase component I 1340650 trpE 3229289 trpE Dehalococcoides ethenogenes 195 anthranilate synthase component I YP_182181.1 1339193 D 243164 CDS YP_182182.1 57233825 3229288 1340634..1341224 1 NC_002936.3 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 1341224 trpG 3229288 trpG Dehalococcoides ethenogenes 195 anthranilate synthase component II YP_182182.1 1340634 D 243164 CDS YP_182183.1 57233824 3229287 1341229..1342254 1 NC_002936.3 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1342254 trpD 3229287 trpD Dehalococcoides ethenogenes 195 anthranilate phosphoribosyltransferase YP_182183.1 1341229 D 243164 CDS YP_182184.1 57233823 3229286 1342259..1343038 1 NC_002936.3 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 1343038 trpC 3229286 trpC Dehalococcoides ethenogenes 195 indole-3-glycerol-phosphate synthase YP_182184.1 1342259 D 243164 CDS YP_182185.1 57233822 3229285 1343035..1343694 1 NC_002936.3 identified by match to protein family HMM PF00697; N-(5'phosphoribosyl)anthranilate isomerase 1343694 trpF 3229285 trpF Dehalococcoides ethenogenes 195 N-(5'phosphoribosyl)anthranilate isomerase YP_182185.1 1343035 D 243164 CDS YP_182186.1 57233821 3229284 1343688..1344710 1 NC_002936.3 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 1344710 3229284 DET1486 Dehalococcoides ethenogenes 195 3-deoxy-7-phosphoheptulonate synthase YP_182186.1 1343688 D 243164 CDS YP_182187.1 57233820 3229283 1344698..1345897 1 NC_002936.3 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1345897 trpB 3229283 trpB Dehalococcoides ethenogenes 195 tryptophan synthase subunit beta YP_182187.1 1344698 D 243164 CDS YP_182188.1 57233819 3229282 1345894..1346661 1 NC_002936.3 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1346661 trpA 3229282 trpA Dehalococcoides ethenogenes 195 tryptophan synthase subunit alpha YP_182188.1 1345894 D 243164 CDS YP_182189.1 57233818 3229281 1346944..1347531 1 NC_002936.3 identified by match to protein family HMM PF02511; thymidylate synthase, flavin-dependent 1347531 thyX 3229281 thyX Dehalococcoides ethenogenes 195 thymidylate synthase, flavin-dependent YP_182189.1 1346944 D 243164 CDS YP_182190.1 57233817 3229280 complement(1347565..1348500) 1 NC_002936.3 peptide ABC transporter, ATP-binding protein 1348500 3229280 DET1490 Dehalococcoides ethenogenes 195 peptide ABC transporter, ATP-binding protein YP_182190.1 1347565 R 243164 CDS YP_182191.1 57233816 3229279 complement(1348494..1349462) 1 NC_002936.3 identified by match to protein family HMM TIGR01727; peptide ABC transporter, ATP-binding protein 1349462 3229279 DET1491 Dehalococcoides ethenogenes 195 peptide ABC transporter, ATP-binding protein YP_182191.1 1348494 R 243164 CDS YP_182192.1 57233815 3229278 complement(1349459..1350298) 1 NC_002936.3 peptide ABC transporter, permease 1350298 3229278 DET1492 Dehalococcoides ethenogenes 195 peptide ABC transporter, permease YP_182192.1 1349459 R 243164 CDS YP_182193.1 57233814 3229277 complement(1350300..1351274) 1 NC_002936.3 peptide ABC transporter, permease 1351274 3229277 DET1493 Dehalococcoides ethenogenes 195 peptide ABC transporter, permease YP_182193.1 1350300 R 243164 CDS YP_182194.1 57233806 3229269 complement(1351334..1352965) 1 NC_002936.3 identified by match to protein family HMM PF00496; peptide ABC transporter, periplasmic peptide-binding protein 1352965 3229269 DET1494 Dehalococcoides ethenogenes 195 peptide ABC transporter, periplasmic peptide-binding protein YP_182194.1 1351334 R 243164 CDS YP_182195.1 57233805 3229268 complement(1352970..1353791) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA3829; hypothetical protein 1353791 3229268 DET1495 Dehalococcoides ethenogenes 195 hypothetical protein YP_182195.1 1352970 R 243164 CDS YP_182196.1 57233804 3229267 1354080..1354526 1 NC_002936.3 identified by similarity to GB:AAK04868.1; hypothetical protein 1354526 3229267 DET1496 Dehalococcoides ethenogenes 195 hypothetical protein YP_182196.1 1354080 D 243164 CDS YP_182197.1 57233803 3229266 1354625..1354774 1 NC_002936.3 hypothetical protein 1354774 3229266 DET1497 Dehalococcoides ethenogenes 195 hypothetical protein YP_182197.1 1354625 D 243164 CDS YP_182198.1 57233802 3229265 1354775..1355167 1 NC_002936.3 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1355167 3229265 DET1498 Dehalococcoides ethenogenes 195 camphor resistance protein CrcB YP_182198.1 1354775 D 243164 CDS YP_182199.1 57233801 3229264 complement(1355217..1355993) 1 NC_002936.3 identified by similarity to OMNI:NTL02MA2934; hypothetical protein 1355993 3229264 DET1499 Dehalococcoides ethenogenes 195 hypothetical protein YP_182199.1 1355217 R 243164 CDS YP_182200.1 57233800 3229263 1356115..1356633 1 NC_002936.3 identified by similarity to OMNI:NTL02MA1100; hypothetical protein 1356633 3229263 DET1500 Dehalococcoides ethenogenes 195 hypothetical protein YP_182200.1 1356115 D 243164 CDS YP_182201.1 57233799 3229262 1356659..1357093 1 NC_002936.3 identified by similarity to SP:P18086; flavodoxin 1357093 3229262 DET1501 Dehalococcoides ethenogenes 195 flavodoxin YP_182201.1 1356659 D 243164 CDS YP_182202.1 57233790 3229253 complement(1357203..1358600) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM3272; major facilitator family protein 1358600 3229253 DET1502 Dehalococcoides ethenogenes 195 major facilitator family protein YP_182202.1 1357203 R 243164 CDS YP_182203.1 57233789 3229252 complement(1358652..1360382) 1 NC_002936.3 identified by similarity to SP:P33650; match to protein family HMM TIGR00231; ferrous iron transport protein B 1360382 3229252 DET1503 Dehalococcoides ethenogenes 195 ferrous iron transport protein B YP_182203.1 1358652 R 243164 CDS YP_182204.1 57233788 3229251 complement(1360379..1360624) 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0221; ferrous iron transport protein A 1360624 3229251 DET1504 Dehalococcoides ethenogenes 195 ferrous iron transport protein A YP_182204.1 1360379 R 243164 CDS YP_182205.1 57233787 3229250 complement(1360664..1361089) 1 NC_002936.3 identified by similarity to GP:22776586; FUR family transcriptional regulator 1361089 3229250 DET1505 Dehalococcoides ethenogenes 195 FUR family transcriptional regulator YP_182205.1 1360664 R 243164 CDS YP_182206.1 57233786 3229249 1361164..1361682 1 NC_002936.3 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1361682 smpB 3229249 smpB Dehalococcoides ethenogenes 195 SsrA-binding protein YP_182206.1 1361164 D 243164 CDS YP_182207.1 57233785 3229248 1362455..1362733 1 NC_002936.3 identified by similarity to SP:P24580; match to protein family HMM PF01527; ISDet3, transposase orfA 1362733 3229248 DET1508 Dehalococcoides ethenogenes 195 ISDet3, transposase orfA YP_182207.1 1362455 D 243164 CDS YP_182208.1 57233784 3229247 complement(1363776..1365254) 1 NC_002936.3 identified by similarity to OMNI:NTL01SS02515; hypothetical protein 1365254 3229247 DET1510 Dehalococcoides ethenogenes 195 hypothetical protein YP_182208.1 1363776 R 243164 CDS YP_182209.1 57233783 3229246 complement(1365392..1365934) 1 NC_002936.3 hypothetical protein 1365934 3229246 DET1511 Dehalococcoides ethenogenes 195 hypothetical protein YP_182209.1 1365392 R 243164 CDS YP_182210.1 57233774 3229237 complement(1365950..1366498) 1 NC_002936.3 hypothetical protein 1366498 3229237 DET1512 Dehalococcoides ethenogenes 195 hypothetical protein YP_182210.1 1365950 R 243164 CDS YP_182211.1 57233773 3229236 complement(1366495..1367790) 1 NC_002936.3 ATPase AAA 1367790 3229236 DET1513 Dehalococcoides ethenogenes 195 ATPase AAA YP_182211.1 1366495 R 243164 CDS YP_182212.1 57233772 3229235 1367965..1368435 1 NC_002936.3 hypothetical protein 1368435 3229235 DET1514 Dehalococcoides ethenogenes 195 hypothetical protein YP_182212.1 1367965 D 243164 CDS YP_182213.1 57233771 3229234 1368492..1369541 1 NC_002936.3 identified by similarity to OMNI:NTL01CA3433; hypothetical protein 1369541 3229234 DET1515 Dehalococcoides ethenogenes 195 hypothetical protein YP_182213.1 1368492 D 243164 CDS YP_182214.1 57233770 3229233 1369914..1370525 1 NC_002936.3 identified by similarity to GP:12642549; nucleotidyltransferase domain-containing protein 1370525 3229233 DET1516 Dehalococcoides ethenogenes 195 nucleotidyltransferase domain-containing protein YP_182214.1 1369914 D 243164 CDS YP_182215.1 57235100 3230572 1370500..1370937 1 NC_002936.3 identified by similarity to GB:AAK00280.1; hypothetical protein 1370937 3230572 DET1517 Dehalococcoides ethenogenes 195 hypothetical protein YP_182215.1 1370500 D 243164 CDS YP_182216.1 57233769 3229232 complement(1371156..1371443) 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 1371443 3229232 DET1518 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_182216.1 1371156 R 243164 CDS YP_182217.1 57233768 3229231 complement(1371471..1372988) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 1372988 3229231 DET1519 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_182217.1 1371471 R 243164 CDS YP_182218.1 57233767 3229230 1373221..1373697 1 NC_002936.3 MarR family transcriptional regulator 1373697 3229230 DET1520 Dehalococcoides ethenogenes 195 MarR family transcriptional regulator YP_182218.1 1373221 D 243164 CDS YP_182219.1 57233758 3229221 complement(1373944..1374213) 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 1374213 3229221 DET1521 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_182219.1 1373944 R 243164 CDS YP_182220.1 57233757 3229220 complement(1374234..1375757) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 1375757 3229220 DET1522 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_182220.1 1374234 R 243164 CDS YP_182221.1 57233756 3229219 complement(1375955..1376584) 1 NC_002936.3 response regulator 1376584 3229219 DET1523 Dehalococcoides ethenogenes 195 response regulator YP_182221.1 1375955 R 243164 CDS YP_182222.1 57233755 3229218 complement(1376763..1377455) 1 NC_002936.3 DNA binding response regulator 1377455 3229218 DET1524 Dehalococcoides ethenogenes 195 DNA binding response regulator YP_182222.1 1376763 R 243164 CDS YP_182223.1 57233754 3229217 1377953..1378465 1 NC_002936.3 transcriptional regulator 1378465 3229217 DET1525 Dehalococcoides ethenogenes 195 transcriptional regulator YP_182223.1 1377953 D 243164 CDS YP_182224.1 57233753 3229216 complement(1378652..1379104) 1 NC_002936.3 lipoprotein 1379104 3229216 DET1526 Dehalococcoides ethenogenes 195 lipoprotein YP_182224.1 1378652 R 243164 CDS YP_182225.1 57233752 3229215 complement(1379171..1379458) 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 1379458 3229215 DET1527 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_182225.1 1379171 R 243164 CDS YP_182226.1 57233751 3229214 complement(1379479..1380888) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 1380888 3229214 DET1528 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_182226.1 1379479 R 243164 CDS YP_182227.1 57233741 3229204 1381310..1381765 1 NC_002936.3 identified by similarity to OMNI:NTL01NS0727; match to protein family HMM TIGR00229; sensory box protein 1381765 3229204 DET1529 Dehalococcoides ethenogenes 195 sensory box protein YP_182227.1 1381310 D 243164 CDS YP_182228.1 57233740 3229203 1381804..1382379 1 NC_002936.3 sensor histidine kinase 1382379 3229203 DET1530 Dehalococcoides ethenogenes 195 sensor histidine kinase YP_182228.1 1381804 D 243164 CDS YP_182229.1 57233739 3229202 1382385..1383044 1 NC_002936.3 LuxR family DNA-binding response regulator 1383044 3229202 DET1531 Dehalococcoides ethenogenes 195 LuxR family DNA-binding response regulator YP_182229.1 1382385 D 243164 CDS YP_182230.1 57233738 3229201 complement(1383265..1383657) 1 NC_002936.3 identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein 1383657 3229201 DET1532 Dehalococcoides ethenogenes 195 dinitrogenase iron-molybdenum cofactor family protein YP_182230.1 1383265 R 243164 CDS YP_182231.1 57233737 3229200 complement(1383661..1383804) 1 NC_002936.3 hypothetical protein 1383804 3229200 DET1533 Dehalococcoides ethenogenes 195 hypothetical protein YP_182231.1 1383661 R 243164 CDS YP_182232.1 57233736 3229199 complement(1383821..1384090) 1 NC_002936.3 identified by similarity to GP:27462922; reductive dehalogenase anchoring protein 1384090 3229199 DET1534 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_182232.1 1383821 R 243164 CDS YP_182233.1 57233735 3229198 complement(1384117..1385601) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 1385601 3229198 DET1535 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_182233.1 1384117 R 243164 CDS YP_182234.1 57233734 3229197 1385828..1386316 1 NC_002936.3 identified by similarity to GB:BAC71817.1; MarR family transcriptional regulator 1386316 3229197 DET1536 Dehalococcoides ethenogenes 195 MarR family transcriptional regulator YP_182234.1 1385828 D 243164 CDS YP_182235.1 57233725 3229188 complement(1386393..1386665) 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 1386665 3229188 DET1537 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_182235.1 1386393 R 243164 CDS YP_182236.1 57233724 3229187 complement(1386684..1388162) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 1388162 3229187 DET1538 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_182236.1 1386684 R 243164 CDS YP_182237.1 57233723 3229186 1388437..1389615 1 NC_002936.3 identified by similarity to OMNI:NTL02MA1116; match to protein family HMM TIGR00229; sensory box sensor histidine kinase 1389615 3229186 DET1539 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_182237.1 1388437 D 243164 CDS YP_182238.1 57233722 3229185 1389612..1390289 1 NC_002936.3 identified by similarity to SP:P21866; DNA-binding response regulator 1390289 3229185 DET1540 Dehalococcoides ethenogenes 195 DNA-binding response regulator YP_182238.1 1389612 D 243164 CDS YP_182239.1 57233721 3229184 complement(1390346..1390702) 1 NC_002936.3 hypothetical protein 1390702 3229184 DET1541 Dehalococcoides ethenogenes 195 hypothetical protein YP_182239.1 1390346 R 243164 CDS YP_182240.1 57233720 3229183 1390701..1390844 1 NC_002936.3 hypothetical protein 1390844 3229183 DET1542 Dehalococcoides ethenogenes 195 hypothetical protein YP_182240.1 1390701 D 243164 CDS YP_182241.1 57233719 3229182 complement(1390854..1391687) 1 NC_002936.3 hypothetical protein 1391687 3229182 DET1543 Dehalococcoides ethenogenes 195 hypothetical protein YP_182241.1 1390854 R 243164 CDS YP_182242.1 57233718 3229181 complement(1391957..1392229) 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 1392229 3229181 DET1544 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_182242.1 1391957 R 243164 CDS YP_182243.1 57233709 3229172 complement(1392249..1393751) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 1393751 3229172 DET1545 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_182243.1 1392249 R 243164 CDS YP_182244.1 57233708 3229171 1394028..1394138 1 NC_002936.3 hypothetical protein 1394138 3229171 DET1546 Dehalococcoides ethenogenes 195 hypothetical protein YP_182244.1 1394028 D 243164 CDS YP_182245.1 57233727 3229190 complement(1394151..1394981) 1 NC_002936.3 identified by similarity to SP:P07022; match to protein family HMM PF00800; prephenate dehydratase 1394981 pheA 3229190 pheA Dehalococcoides ethenogenes 195 prephenate dehydratase YP_182245.1 1394151 R 243164 CDS YP_182246.1 57233726 3229189 complement(1395432..1396280) 1 NC_002936.3 identified by similarity to OMNI:NTL01TE2176; hypothetical protein 1396280 3229189 DET1548 Dehalococcoides ethenogenes 195 hypothetical protein YP_182246.1 1395432 R 243164 CDS YP_182247.1 57233717 3229180 complement(1396293..1396511) 1 NC_002936.3 preprotein translocase subunit SecG 1396511 secG 3229180 secG Dehalococcoides ethenogenes 195 preprotein translocase subunit SecG YP_182247.1 1396293 R 243164 CDS YP_182248.1 57233716 3229179 complement(1396514..1397992) 1 NC_002936.3 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1397992 gatB 3229179 gatB Dehalococcoides ethenogenes 195 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_182248.1 1396514 R 243164 CDS YP_182249.1 57235099 3230571 complement(1398114..1399778) 1 NC_002936.3 resolvase domain-containing protein 1399778 3230571 DET1552 Dehalococcoides ethenogenes 195 resolvase domain-containing protein YP_182249.1 1398114 R 243164 CDS YP_182250.1 57233715 3229178 complement(1399733..1400665) 1 NC_002936.3 hypothetical protein 1400665 3229178 DET1553 Dehalococcoides ethenogenes 195 hypothetical protein YP_182250.1 1399733 R 243164 CDS YP_182251.1 57233714 3229177 1400755..1400913 1 NC_002936.3 hypothetical protein 1400913 3229177 DET1554 Dehalococcoides ethenogenes 195 hypothetical protein YP_182251.1 1400755 D 243164 CDS YP_182252.1 57235098 3230570 1401624..1401842 1 NC_002936.3 DNA-binding protein 1401842 3230570 DET1555 Dehalococcoides ethenogenes 195 DNA-binding protein YP_182252.1 1401624 D 243164 CDS YP_182253.1 57233713 3229176 complement(1402505..1403269) 1 NC_002936.3 identified by similarity to OMNI:MJ1613; hypothetical protein 1403269 3229176 DET1556 Dehalococcoides ethenogenes 195 hypothetical protein YP_182253.1 1402505 R 243164 CDS YP_182254.1 57233712 3229175 complement(1403346..1403798) 1 NC_002936.3 lipoprotein 1403798 3229175 DET1557 Dehalococcoides ethenogenes 195 lipoprotein YP_182254.1 1403346 R 243164 CDS YP_182255.1 57233711 3229174 complement(1404035..1404307) 1 NC_002936.3 identified by similarity to GP:27228279; reductive dehalogenase anchoring protein 1404307 3229174 DET1558 Dehalococcoides ethenogenes 195 reductive dehalogenase anchoring protein YP_182255.1 1404035 R 243164 CDS YP_182256.1 57233710 3229173 complement(1404340..1405788) 1 NC_002936.3 identified by similarity to GP:8163916; match to protein family HMM TIGR01409; reductive dehalogenase 1405788 3229173 DET1559 Dehalococcoides ethenogenes 195 reductive dehalogenase YP_182256.1 1404340 R 243164 CDS YP_182257.1 57233701 3229164 1406081..1407115 1 NC_002936.3 identified by match to protein family HMM TIGR00229; sensory box sensor histidine kinase 1407115 3229164 DET1560 Dehalococcoides ethenogenes 195 sensory box sensor histidine kinase YP_182257.1 1406081 D 243164 CDS YP_182258.1 57233700 3229163 1407133..1407813 1 NC_002936.3 identified by similarity to SP:P54662; LuxR family DNA-binding response regulator 1407813 3229163 DET1561 Dehalococcoides ethenogenes 195 LuxR family DNA-binding response regulator YP_182258.1 1407133 D 243164 CDS YP_182259.1 57233699 3229162 1408035..1408757 1 NC_002936.3 hypothetical protein 1408757 3229162 DET1562 Dehalococcoides ethenogenes 195 hypothetical protein YP_182259.1 1408035 D 243164 CDS YP_182260.1 57233698 3229161 complement(1408776..1409306) 1 NC_002936.3 hypothetical protein 1409306 3229161 DET1563 Dehalococcoides ethenogenes 195 hypothetical protein YP_182260.1 1408776 R 243164 CDS YP_182261.1 57233697 3229160 complement(1409406..1409570) 1 NC_002936.3 hypothetical protein 1409570 3229160 DET1564 Dehalococcoides ethenogenes 195 hypothetical protein YP_182261.1 1409406 R 243164 CDS YP_182262.1 57233696 3229159 complement(1409594..1409845) 1 NC_002936.3 iron-sulfur cluster-binding protein 1409845 3229159 DET1565 Dehalococcoides ethenogenes 195 iron-sulfur cluster-binding protein YP_182262.1 1409594 R 243164 CDS YP_182263.1 57233695 3229158 complement(1409852..1410541) 1 NC_002936.3 MerR family transcriptional regulator 1410541 3229158 DET1566 Dehalococcoides ethenogenes 195 MerR family transcriptional regulator YP_182263.1 1409852 R 243164 CDS YP_182264.1 57233694 3229157 complement(1410528..1410743) 1 NC_002936.3 hypothetical protein 1410743 3229157 DET1567 Dehalococcoides ethenogenes 195 hypothetical protein YP_182264.1 1410528 R 243164 CDS YP_182265.1 57233685 3229148 complement(1411000..1411125) 1 NC_002936.3 hypothetical protein 1411125 3229148 DET1568 Dehalococcoides ethenogenes 195 hypothetical protein YP_182265.1 1411000 R 243164 CDS YP_182266.1 57233684 3229147 complement(1411297..1411689) 1 NC_002936.3 hypothetical protein 1411689 3229147 DET1569 Dehalococcoides ethenogenes 195 hypothetical protein YP_182266.1 1411297 R 243164 CDS YP_182267.1 57233683 3229146 complement(1411916..1412431) 1 NC_002936.3 identified by similarity to SP:P77668; hydrogenase, group 4, HycG subunit 1412431 3229146 DET1570 Dehalococcoides ethenogenes 195 hydrogenase, group 4, HycG subunit YP_182267.1 1411916 R 243164 CDS YP_182268.1 57233682 3229145 complement(1412442..1414022) 1 NC_002936.3 identified by similarity to SP:P77329; match to protein family HMM PF00346; hydrogenase, group 4, HycE subunit 1414022 3229145 DET1571 Dehalococcoides ethenogenes 195 hydrogenase, group 4, HycE subunit YP_182268.1 1412442 R 243164 CDS YP_182269.1 57233681 3229144 complement(1414025..1415407) 1 NC_002936.3 Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase membrane subunit 1415407 3229144 DET1572 Dehalococcoides ethenogenes 195 hydrogenase membrane subunit YP_182269.1 1414025 R 243164 CDS YP_182270.1 57233680 3229143 complement(1415506..1416186) 1 NC_002936.3 identified by similarity to OMNI:NTL01MM1061; hydrogenase subunit 1416186 3229143 DET1573 Dehalococcoides ethenogenes 195 hydrogenase subunit YP_182270.1 1415506 R 243164 CDS YP_182271.1 57233679 3229142 complement(1416190..1417131) 1 NC_002936.3 identified by similarity to SP:P77858; hydrogenase, HycD subunit 1417131 3229142 DET1574 Dehalococcoides ethenogenes 195 hydrogenase, HycD subunit YP_182271.1 1416190 R 243164 CDS YP_182272.1 57233678 3229141 complement(1417209..1419062) 1 NC_002936.3 Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase membrane subunit 1419062 3229141 DET1575 Dehalococcoides ethenogenes 195 hydrogenase membrane subunit YP_182272.1 1417209 R 243164 CDS YP_182273.1 57233670 3229133 1419346..1419777 1 NC_002936.3 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1419777 mgsA 3229133 mgsA Dehalococcoides ethenogenes 195 methylglyoxal synthase YP_182273.1 1419346 D 243164 CDS YP_182274.1 57233669 3229132 complement(1419860..1419970) 1 NC_002936.3 hypothetical protein 1419970 3229132 DET1577 Dehalococcoides ethenogenes 195 hypothetical protein YP_182274.1 1419860 R 243164 CDS YP_182275.1 57233668 3229131 complement(1419892..1420194) 1 NC_002936.3 hypothetical protein 1420194 3229131 DET1578 Dehalococcoides ethenogenes 195 hypothetical protein YP_182275.1 1419892 R 243164 CDS YP_182276.1 57233667 3229130 complement(1420250..1421617) 1 NC_002936.3 identified by similarity to OMNI:NTL01NS1411; match to protein family HMM PF00924; mechanosensitive ion channel family protein 1421617 3229130 DET1579 Dehalococcoides ethenogenes 195 mechanosensitive ion channel family protein YP_182276.1 1420250 R 243164 CDS YP_182277.1 57233666 3229129 complement(1421678..1422265) 1 NC_002936.3 TetR family transcriptional regulator 1422265 3229129 DET1580 Dehalococcoides ethenogenes 195 TetR family transcriptional regulator YP_182277.1 1421678 R 243164 CDS YP_182278.1 57233665 3229128 1422575..1423216 1 NC_002936.3 anti-oxidant AhpCTSA family protein 1423216 3229128 DET1581 Dehalococcoides ethenogenes 195 anti-oxidant AhpCTSA family protein YP_182278.1 1422575 D 243164 CDS YP_182279.1 57233664 3229127 1423226..1423447 1 NC_002936.3 identified by similarity to OMNI:AF1697; hypothetical protein 1423447 3229127 DET1582 Dehalococcoides ethenogenes 195 hypothetical protein YP_182279.1 1423226 D 243164 CDS YP_182280.1 57233663 3229126 1423779..1424036 1 NC_002936.3 hypothetical protein 1424036 3229126 DET1584 Dehalococcoides ethenogenes 195 hypothetical protein YP_182280.1 1423779 D 243164 CDS YP_182281.1 57233662 3229125 1424237..1424620 1 NC_002936.3 identified by similarity to GP:27361669; hypothetical protein 1424620 3229125 DET1585 Dehalococcoides ethenogenes 195 hypothetical protein YP_182281.1 1424237 D 243164 CDS YP_182282.1 57233652 3229115 1424671..1425237 1 NC_002936.3 hypothetical protein 1425237 3229115 DET1586 Dehalococcoides ethenogenes 195 hypothetical protein YP_182282.1 1424671 D 243164 CDS YP_182283.1 57233651 3229114 1425255..1426448 1 NC_002936.3 M28 family peptidase 1426448 3229114 DET1587 Dehalococcoides ethenogenes 195 M28 family peptidase YP_182283.1 1425255 D 243164 CDS YP_182284.1 57233650 3229113 complement(1426530..1427222) 1 NC_002936.3 identified by match to protein family HMM TIGR01172; serine O-acetyltransferase 1427222 cysE 3229113 cysE Dehalococcoides ethenogenes 195 serine O-acetyltransferase YP_182284.1 1426530 R 243164 CDS YP_182285.1 57233649 3229112 complement(1427250..1427594) 1 NC_002936.3 identified by similarity to SP:P36654; match to protein family HMM PF03091; divalent cation tolerance protein CutA 1427594 cutA 3229112 cutA Dehalococcoides ethenogenes 195 divalent cation tolerance protein CutA YP_182285.1 1427250 R 243164 CDS YP_182286.1 57233648 3229111 complement(1427599..1428507) 1 NC_002936.3 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1428507 nadA 3229111 nadA Dehalococcoides ethenogenes 195 quinolinate synthetase YP_182286.1 1427599 R 243164 CDS YP_182287.1 57233647 3229110 complement(1428632..1429297) 1 NC_002936.3 identified by similarity to SP:O86169; UbiE/COQ5 family methlytransferase 1429297 3229110 DET1591 Dehalococcoides ethenogenes 195 UbiE/COQ5 family methlytransferase YP_182287.1 1428632 R 243164 CDS YP_182288.1 57233646 3229109 complement(1429294..1430367) 1 NC_002936.3 AIR synthase domain-containing protein 1430367 3229109 DET1592 Dehalococcoides ethenogenes 195 AIR synthase domain-containing protein YP_182288.1 1429294 R 243164 CDS YP_182289.1 57233645 3229108 complement(1430373..1430471) 1 NC_002936.3 hypothetical protein 1430471 3229108 DET1593 Dehalococcoides ethenogenes 195 hypothetical protein YP_182289.1 1430373 R 243164 CDS YP_182290.1 57233636 3229098 complement(1431220..1432254) 1 NC_002936.3 identified by similarity to GP:2177178; match to protein family HMM PF02424; match to protein family HMM TIGR01409; ApbE/NosX family protein 1432254 3229098 DET1595 Dehalococcoides ethenogenes 195 ApbE/NosX family protein YP_182290.1 1431220 R 243164 CDS YP_182291.1 57233635 3229097 complement(1432337..1433530) 1 NC_002936.3 identified by similarity to GP:7710206; transcriptional regulator 1433530 3229097 DET1596 Dehalococcoides ethenogenes 195 transcriptional regulator YP_182291.1 1432337 R 243164 CDS YP_182292.1 57233634 3229096 complement(1433721..1433843) 1 NC_002936.3 hypothetical protein 1433843 3229096 DET1597 Dehalococcoides ethenogenes 195 hypothetical protein YP_182292.1 1433721 R 243164 CDS YP_182293.1 57233633 3229095 complement(1433816..1435006) 1 NC_002936.3 identified by similarity to GP:7710206; transcriptional regulator 1435006 3229095 DET1598 Dehalococcoides ethenogenes 195 transcriptional regulator YP_182293.1 1433816 R 243164 CDS YP_182294.1 57233632 3229094 complement(1435129..1435914) 1 NC_002936.3 identified by similarity to SP:P27857; match to protein family HMM TIGR00945; Sec-independent protein translocase TatC 1435914 tatC 3229094 tatC Dehalococcoides ethenogenes 195 Sec-independent protein translocase TatC YP_182294.1 1435129 R 243164 CDS YP_182295.1 57233631 3229093 complement(1435911..1436201) 1 NC_002936.3 twin-arginine translocation protein TatB 1436201 3229093 DET1600 Dehalococcoides ethenogenes 195 twin-arginine translocation protein TatB YP_182295.1 1435911 R 243164 CDS YP_182296.1 57233622 3229084 complement(1436268..1436504) 1 NC_002936.3 twin arginine-targeting protein translocase 1436504 3229084 DET1601 Dehalococcoides ethenogenes 195 twin arginine-targeting protein translocase YP_182296.1 1436268 R 243164 CDS YP_182297.1 57233621 3229083 complement(1436588..1436785) 1 NC_002936.3 identified by match to protein family HMM TIGR01411; twin arginine-targeting protein translocase 1436785 tatA 3229083 tatA Dehalococcoides ethenogenes 195 twin arginine-targeting protein translocase YP_182297.1 1436588 R 243164 CDS YP_182298.1 57233620 3229082 1437031..1437879 1 NC_002936.3 identified by similarity to SP:P28822; match to protein family HMM TIGR01496; dihydropteroate synthase 1437879 folP 3229082 folP Dehalococcoides ethenogenes 195 dihydropteroate synthase YP_182298.1 1437031 D 243164 CDS YP_182299.1 57233619 3229081 1437870..1438400 1 NC_002936.3 identified by match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1438400 folK 3229081 folK Dehalococcoides ethenogenes 195 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_182299.1 1437870 D 243164 CDS YP_182300.1 57233618 3229080 1438400..1438771 1 NC_002936.3 6-pyruvoyl tetrahydrobiopterin synthase 1438771 3229080 DET1605 Dehalococcoides ethenogenes 195 6-pyruvoyl tetrahydrobiopterin synthase YP_182300.1 1438400 D 243164 CDS YP_182301.1 57233617 3229079 1438895..1439908 1 NC_002936.3 hypothetical protein 1439908 recA 3229079 recA Dehalococcoides ethenogenes 195 hypothetical protein YP_182301.1 1438895 D 243164 CDS YP_182302.1 57233616 3229078 1439995..1440639 1 NC_002936.3 identified by match to protein family HMM PF02631; regulatory protein RecX 1440639 recX 3229078 recX Dehalococcoides ethenogenes 195 regulatory protein RecX YP_182302.1 1439995 D 243164 CDS YP_182303.1 57233607 3229069 1440711..1442294 1 NC_002936.3 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1442294 3229069 DET1608 Dehalococcoides ethenogenes 195 phosphodiesterase YP_182303.1 1440711 D 243164 CDS YP_182304.1 57233606 3229068 1442306..1443076 1 NC_002936.3 identified by similarity to OMNI:NTL01BH2379; match to protein family HMM PF00149; match to protein family HMM TIGR00282; Ser/Thr protein phosphatase 1443076 3229068 DET1609 Dehalococcoides ethenogenes 195 Ser/Thr protein phosphatase YP_182304.1 1442306 D 243164 CDS YP_182305.1 57233605 3229067 1443079..1443942 1 NC_002936.3 phosphotransferase domain-containing protein 1443942 3229067 DET1610 Dehalococcoides ethenogenes 195 phosphotransferase domain-containing protein YP_182305.1 1443079 D 243164 CDS YP_182306.1 57233604 3229066 1443939..1444640 1 NC_002936.3 identified by similarity to SP:Q9RSV1; membrane protein 1444640 3229066 DET1611 Dehalococcoides ethenogenes 195 membrane protein YP_182306.1 1443939 D 243164 CDS YP_182307.1 57233603 3229065 complement(1444691..1445353) 1 NC_002936.3 HhH-GPD family DNA repair protein 1445353 3229065 DET1612 Dehalococcoides ethenogenes 195 HhH-GPD family DNA repair protein YP_182307.1 1444691 R 243164 CDS YP_182308.1 57233602 3229064 complement(1445335..1445778) 1 NC_002936.3 identified by similarity to SP:P28634; match to protein family HMM PF01980; match to protein family HMM TIGR00104; hypothetical protein 1445778 3229064 DET1613 Dehalococcoides ethenogenes 195 hypothetical protein YP_182308.1 1445335 R 243164 CDS YP_182309.1 57233601 3229063 complement(1445833..1447080) 1 NC_002936.3 identified by similarity to SP:Q44290; homocitrate synthase 1447080 3229063 DET1614 Dehalococcoides ethenogenes 195 homocitrate synthase YP_182309.1 1445833 R 243164 CDS YP_182310.1 57233600 3229062 1447241..1447732 1 NC_002936.3 identified by match to protein family HMM PF01230; HIT domain-containing protein 1447732 3229062 DET1615 Dehalococcoides ethenogenes 195 HIT domain-containing protein YP_182310.1 1447241 D 243164 CDS YP_182311.1 57233591 3229053 1447883..1448155 1 NC_002936.3 identified by match to protein family HMM TIGR01439; AbrB family transcriptional regulator 1448155 3229053 DET1616 Dehalococcoides ethenogenes 195 AbrB family transcriptional regulator YP_182311.1 1447883 D 243164 CDS YP_182312.1 57233590 3229052 1448152..1448466 1 NC_002936.3 identified by similarity to SP:O29392; hypothetical protein 1448466 3229052 DET1617 Dehalococcoides ethenogenes 195 hypothetical protein YP_182312.1 1448152 D 243164 CDS YP_182313.1 57233589 3229051 1448483..1448674 1 NC_002936.3 hypothetical protein 1448674 3229051 DET1618 Dehalococcoides ethenogenes 195 hypothetical protein YP_182313.1 1448483 D 243164 CDS YP_182314.1 57233588 3229050 1448678..1449619 1 NC_002936.3 identified by similarity to OMNI:NTL01TT2024; ABC transporter ATP-binding protein 1449619 3229050 DET1619 Dehalococcoides ethenogenes 195 ABC transporter ATP-binding protein YP_182314.1 1448678 D 243164 CDS YP_182315.1 57233587 3229049 1449616..1450377 1 NC_002936.3 hypothetical protein 1450377 3229049 DET1620 Dehalococcoides ethenogenes 195 hypothetical protein YP_182315.1 1449616 D 243164 CDS YP_182316.1 57233586 3229048 1450411..1451751 1 NC_002936.3 hypothetical protein 1451751 3229048 DET1621 Dehalococcoides ethenogenes 195 hypothetical protein YP_182316.1 1450411 D 243164 CDS YP_182317.1 57233585 3229047 1451844..1452287 1 NC_002936.3 identified by similarity to OMNI:CT0707; match to protein family HMM PF03479; hypothetical protein 1452287 3229047 DET1622 Dehalococcoides ethenogenes 195 hypothetical protein YP_182317.1 1451844 D 243164 CDS YP_182318.1 57233584 3229046 complement(1452448..1452615) 1 NC_002936.3 identified by similarity to SP:P00273; match to protein family HMM TIGR00319; desulforedoxin 1452615 3229046 DET1623 Dehalococcoides ethenogenes 195 desulforedoxin YP_182318.1 1452448 R 243164 CDS YP_182319.1 57233583 3229045 complement(1452648..1452857) 1 NC_002936.3 hypothetical protein 1452857 3229045 DET1624 Dehalococcoides ethenogenes 195 hypothetical protein YP_182319.1 1452648 R 243164 CDS YP_182320.1 57233575 3229037 complement(1453105..1454130) 1 NC_002936.3 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1454130 argC 3229037 argC Dehalococcoides ethenogenes 195 N-acetyl-gamma-glutamyl-phosphate reductase YP_182320.1 1453105 R 243164 CDS YP_182321.1 57233574 3229036 complement(1454186..1455889) 1 NC_002936.3 sodium/hydrogen exchanger family protein 1455889 3229036 DET1627 Dehalococcoides ethenogenes 195 sodium/hydrogen exchanger family protein YP_182321.1 1454186 R 243164 CDS YP_182322.1 57233573 3229035 1456045..1456818 1 NC_002936.3 identified by similarity to OMNI:NTL01PA1700; metallo-beta-lactamase 1456818 3229035 DET1628 Dehalococcoides ethenogenes 195 metallo-beta-lactamase YP_182322.1 1456045 D 243164 CDS YP_182323.1 57233572 3229034 1456861..1458696 1 NC_002936.3 identified by similarity to OMNI:NTL01TT0848; radical SAM domain-containing protein 1458696 3229034 DET1629 Dehalococcoides ethenogenes 195 radical SAM domain-containing protein YP_182323.1 1456861 D 243164 CDS YP_182324.1 57233707 3229170 complement(1458769..1461198) 1 NC_002936.3 identified by similarity to SP:P05653; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase, A subunit 1461198 gyrA 3229170 gyrA Dehalococcoides ethenogenes 195 DNA gyrase, A subunit YP_182324.1 1458769 R 243164 CDS YP_182325.1 57233706 3229169 complement(1461202..1462008) 1 NC_002936.3 identified by match to protein family HMM PF00515; TPR domain-containing protein 1462008 3229169 DET1631 Dehalococcoides ethenogenes 195 TPR domain-containing protein YP_182325.1 1461202 R 243164 CDS YP_182326.1 57233705 3229168 1462222..1462440 1 NC_002936.3 identified by match to protein family HMM PF01106; NifU-like protein 1462440 3229168 DET1632 Dehalococcoides ethenogenes 195 NifU-like protein YP_182326.1 1462222 D 243164 CDS YP_182327.1 57233704 3229167 complement(1462500..1463717) 1 NC_002936.3 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1463717 metL 3229167 metL Dehalococcoides ethenogenes 195 aspartate kinase YP_182327.1 1462500 R 243164 CDS YP_182328.1 57233703 3229166 complement(1463829..1464032) 1 NC_002936.3 hypothetical protein 1464032 3229166 DET1634 Dehalococcoides ethenogenes 195 hypothetical protein YP_182328.1 1463829 R 243164 CDS YP_182329.1 57233702 3229165 complement(1464055..1465236) 1 NC_002936.3 catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 1465236 3229165 DET1635 Dehalococcoides ethenogenes 195 cofactor-independent phosphoglycerate mutase YP_182329.1 1464055 R 243164 CDS YP_182330.1 57233693 3229156 complement(1465389..1466183) 1 NC_002936.3 identified by match to protein family HMM TIGR00444; mazG family protein 1466183 3229156 DET1637 Dehalococcoides ethenogenes 195 mazG family protein YP_182330.1 1465389 R 243164 CDS YP_182331.1 57233692 3229155 complement(1466309..1467007) 1 NC_002936.3 hypothetical protein 1467007 3229155 DET1638 Dehalococcoides ethenogenes 195 hypothetical protein YP_182331.1 1466309 R 243164 CDS YP_182332.1 57233691 3229154 1467146..1467412 1 NC_002936.3 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1467412 rpsT 3229154 rpsT Dehalococcoides ethenogenes 195 30S ribosomal protein S20 YP_182332.1 1467146 D 243164 CDS YP_182333.1 57233690 3229153 1467519..1468157 1 NC_002936.3 identified by similarity to SP:P31080; LexA repressor 1468157 lexA 3229153 lexA Dehalococcoides ethenogenes 195 LexA repressor YP_182333.1 1467519 D 243164 CDS YP_182334.1 57233689 3229152 1468172..1468753 1 NC_002936.3 catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase 1468753 3229152 DET1641 Dehalococcoides ethenogenes 195 L-fuculose phosphate aldolase YP_182334.1 1468172 D 243164 CDS YP_182335.1 57233688 3229151 complement(1468750..1469688) 1 NC_002936.3 identified by match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 1469688 fmt 3229151 fmt Dehalococcoides ethenogenes 195 methionyl-tRNA formyltransferase YP_182335.1 1468750 R 243164 CDS