-- dump date 20120504_143415 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 526222000001 SEQ_END SEQ_END NC_012881.1 4289847 4289847 DR NC_012881.1; contig end 4289847..4289847 Desulfovibrio salexigens DSM 2638 YP_002989612.1 CDS Desal_0001 NC_012881.1 215 979 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: dde:Dde_0031 chromosome segregation ATPase; cobyrinic acid ac-diamide synthase 215..979 Desulfovibrio salexigens DSM 2638 8092090 YP_002989613.1 CDS Desal_0002 NC_012881.1 1044 1469 R KEGG: dvm:DvMF_2046 hypothetical protein; hypothetical protein complement(1044..1469) Desulfovibrio salexigens DSM 2638 8092141 YP_002989614.1 CDS Desal_0003 NC_012881.1 1589 2515 D KEGG: dvm:DvMF_2045 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 1589..2515 Desulfovibrio salexigens DSM 2638 8092142 YP_002989615.1 CDS Desal_0004 NC_012881.1 2530 3540 D TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: dvu:DVU3361 ADP-heptose synthase; rfaE bifunctional protein 2530..3540 Desulfovibrio salexigens DSM 2638 8092143 YP_002989616.1 CDS Desal_0005 NC_012881.1 3629 4888 D PFAM: Stage II sporulation E family protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: sfu:Sfum_2453 serine phosphatase; cyclic nucleotide-binding protein 3629..4888 Desulfovibrio salexigens DSM 2638 8092144 YP_002989617.1 CDS Desal_0006 NC_012881.1 4919 5227 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dde:Dde_0024 anti-anti-sigma regulatory factor, SpoIIAA; anti-sigma-factor antagonist 4919..5227 Desulfovibrio salexigens DSM 2638 8092145 YP_002989618.1 CDS Desal_0007 NC_012881.1 5267 6016 D PFAM: protein of unknown function DUF140; KEGG: dde:Dde_0023 transporter; hypothetical protein 5267..6016 Desulfovibrio salexigens DSM 2638 8092146 YP_002989619.1 CDS Desal_0008 NC_012881.1 6023 6826 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvl:Dvul_1817 ABC transporter; ABC transporter 6023..6826 Desulfovibrio salexigens DSM 2638 8092147 YP_002989620.1 CDS Desal_0009 NC_012881.1 6841 7803 D PFAM: mammalian cell entry related domain protein; KEGG: dde:Dde_0021 ABC-type transport system involved in resistance to organic solvents periplasmic component-like; mammalian cell entry related domain protein 6841..7803 Desulfovibrio salexigens DSM 2638 8092148 YP_002989621.1 CDS Desal_0010 NC_012881.1 7796 8422 D KEGG: dde:Dde_0020 hypothetical protein; hypothetical protein 7796..8422 Desulfovibrio salexigens DSM 2638 8092149 YP_002989622.1 CDS Desal_0011 NC_012881.1 8422 8820 D KEGG: dvl:Dvul_0033 hypothetical protein; hypothetical protein 8422..8820 Desulfovibrio salexigens DSM 2638 8092150 YP_002989623.1 CDS Desal_0012 NC_012881.1 8817 10190 D hypothetical protein 8817..10190 Desulfovibrio salexigens DSM 2638 8092151 YP_002989624.1 CDS Desal_0013 NC_012881.1 10235 11572 D catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 10235..11572 Desulfovibrio salexigens DSM 2638 8092152 YP_002989625.1 CDS Desal_0014 NC_012881.1 11796 12965 D hypothetical protein 11796..12965 Desulfovibrio salexigens DSM 2638 8092153 YP_002989626.1 CDS Desal_0015 NC_012881.1 13021 14346 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dde:Dde_2966 HD domain-containing protein; metal dependent phosphohydrolase complement(13021..14346) Desulfovibrio salexigens DSM 2638 8092154 YP_002989627.1 CDS Desal_0016 NC_012881.1 14466 15737 R TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: dvm:DvMF_1426 dihydroorotase, multifunctional complex type; dihydroorotase, multifunctional complex type complement(14466..15737) Desulfovibrio salexigens DSM 2638 8092155 YP_002989628.1 CDS pyrB NC_012881.1 15750 16673 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(15750..16673) Desulfovibrio salexigens DSM 2638 8092156 YP_002989629.1 CDS Desal_0018 NC_012881.1 16707 17849 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: dvu:DVU2900 amidohydrolase family protein; amidohydrolase complement(16707..17849) Desulfovibrio salexigens DSM 2638 8092157 YP_002989630.1 CDS Desal_0019 NC_012881.1 17891 18250 R KEGG: rfr:Rfer_2233 hypothetical protein; hypothetical protein complement(17891..18250) Desulfovibrio salexigens DSM 2638 8092158 YP_002989631.1 CDS Desal_0020 NC_012881.1 18341 19309 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: dal:Dalk_1232 signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type complement(18341..19309) Desulfovibrio salexigens DSM 2638 8092159 YP_002989632.1 CDS Desal_0021 NC_012881.1 19384 20019 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ara:Arad_1644 amino acid efflux protein; lysine exporter protein LysE/YggA complement(19384..20019) Desulfovibrio salexigens DSM 2638 8092160 YP_002989633.1 CDS Desal_0022 NC_012881.1 20373 20624 R hypothetical protein complement(20373..20624) Desulfovibrio salexigens DSM 2638 8092161 YP_002989634.1 CDS Desal_0023 NC_012881.1 21290 22216 R KEGG: dvm:DvMF_1527 hypothetical protein; hypothetical protein complement(21290..22216) Desulfovibrio salexigens DSM 2638 8092162 YP_002989635.1 CDS Desal_0024 NC_012881.1 22262 23647 R PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: msl:Msil_3170 phospholipase D/transphosphatidylase; phospholipase D/Transphosphatidylase complement(22262..23647) Desulfovibrio salexigens DSM 2638 8092163 YP_002989636.1 CDS Desal_0025 NC_012881.1 23998 25164 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bxe:Bxe_C1377 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 23998..25164 Desulfovibrio salexigens DSM 2638 8092164 YP_002989637.1 CDS Desal_0026 NC_012881.1 25161 25937 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: aeh:Mlg_2075 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 25161..25937 Desulfovibrio salexigens DSM 2638 8092165 YP_002989638.1 CDS Desal_0027 NC_012881.1 25950 26675 D PFAM: OmpA/MotB domain protein; KEGG: maq:Maqu_0313 flagellar motor protein MotB; OmpA/MotB domain-containing protein 25950..26675 Desulfovibrio salexigens DSM 2638 8092166 YP_002989639.1 CDS Desal_0028 NC_012881.1 26707 27678 R PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_3114 glycosyl transferase, family 2; family 2 glycosyl transferase complement(26707..27678) Desulfovibrio salexigens DSM 2638 8092167 YP_002989640.1 CDS Desal_0029 NC_012881.1 27678 28544 R PFAM: YdjC family protein; KEGG: sfu:Sfum_3115 YdjC family protein; hypothetical protein complement(27678..28544) Desulfovibrio salexigens DSM 2638 8092168 YP_002989641.1 CDS Desal_0030 NC_012881.1 28624 28842 R hypothetical protein complement(28624..28842) Desulfovibrio salexigens DSM 2638 8092169 YP_002989642.1 CDS Desal_0031 NC_012881.1 29129 29755 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: gbm:Gbem_1225 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 29129..29755 Desulfovibrio salexigens DSM 2638 8092170 YP_002989643.1 CDS Desal_0032 NC_012881.1 29837 32722 R PFAM: peptidase M16C associated domain protein; peptidase M16 domain protein; KEGG: sfu:Sfum_1661 peptidase M16C associated domain protein; peptidase M16C associated domain protein complement(29837..32722) Desulfovibrio salexigens DSM 2638 8092171 YP_002989644.1 CDS Desal_0033 NC_012881.1 32963 33595 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: dvm:DvMF_0219 peroxiredoxin; alkyl hydroperoxide reductase 32963..33595 Desulfovibrio salexigens DSM 2638 8092172 YP_002989645.1 CDS Desal_0034 NC_012881.1 33836 34624 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: dde:Dde_0009 hypothetical protein; methyltransferase type 11 33836..34624 Desulfovibrio salexigens DSM 2638 8092173 YP_002989646.1 CDS Desal_0035 NC_012881.1 34646 35077 D PFAM: 17 kDa surface antigen; KEGG: dps:DP0122 17 kDa surface antigen; 17 kDa surface antigen 34646..35077 Desulfovibrio salexigens DSM 2638 8092174 YP_002989647.1 CDS Desal_0036 NC_012881.1 35155 37257 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: dde:Dde_1279 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(35155..37257) Desulfovibrio salexigens DSM 2638 8092175 YP_002989648.1 CDS Desal_0037 NC_012881.1 37545 38918 R PFAM: MOFRL domain protein; KEGG: dvu:DVU0765 hydroxypyruvate reductase; glycerate kinase complement(37545..38918) Desulfovibrio salexigens DSM 2638 8092176 YP_002989649.1 CDS Desal_0038 NC_012881.1 39038 39751 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: esa:ESA_03613 transcriptional regulator NanR; GntR family transcriptional regulator complement(39038..39751) Desulfovibrio salexigens DSM 2638 8092177 YP_002989650.1 CDS Desal_0039 NC_012881.1 40011 41957 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pca:Pcar_1355 methyl-accepting chemotaxis protein (MCP); methyl-accepting chemotaxis sensory transducer 40011..41957 Desulfovibrio salexigens DSM 2638 8092178 YP_002989651.1 CDS Desal_0040 NC_012881.1 42008 42796 R PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: pol:Bpro_5441 methylase involved in ubiquinone/menaquinone biosynthesis-like; methyltransferase type 12 complement(42008..42796) Desulfovibrio salexigens DSM 2638 8092179 YP_002989652.1 CDS Desal_0041 NC_012881.1 43520 44785 D KEGG: dde:Dde_0540 phenylacetate-coenzyme A ligase; phenylacetate-coenzyme A ligase 43520..44785 Desulfovibrio salexigens DSM 2638 8092182 YP_002989653.1 CDS Desal_0042 NC_012881.1 44793 45971 D PFAM: protein of unknown function DUF399; KEGG: dde:Dde_0541 PDZ/DHR/GLGF; hypothetical protein 44793..45971 Desulfovibrio salexigens DSM 2638 8092183 YP_002989654.1 CDS Desal_0043 NC_012881.1 45992 46816 D KEGG: dde:Dde_0542 DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; zinc finger Fpg domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; formamidopyrimidine-DNA glycosylase 45992..46816 Desulfovibrio salexigens DSM 2638 8092184 YP_002989655.1 CDS Desal_0044 NC_012881.1 47017 48537 D TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: dde:Dde_0543 integral membrane protein MviN; integral membrane protein MviN 47017..48537 Desulfovibrio salexigens DSM 2638 8092185 YP_002989656.1 CDS Desal_0045 NC_012881.1 48643 49368 D PFAM: methyltransferase type 11; methyltransferase small; methyltransferase type 12; RNA methylase; KEGG: dde:Dde_3501 hypothetical protein; methyltransferase type 11 48643..49368 Desulfovibrio salexigens DSM 2638 8092186 YP_002989657.1 CDS Desal_0046 NC_012881.1 49591 50931 D KEGG: met:M446_6288 ATPase involved in DNA repair-like protein; DNA repair ATPase-like protein 49591..50931 Desulfovibrio salexigens DSM 2638 8092187 YP_002989658.1 CDS Desal_0047 NC_012881.1 50921 51874 D KEGG: met:M446_6289 hypothetical protein; hypothetical protein 50921..51874 Desulfovibrio salexigens DSM 2638 8092188 YP_002989659.1 CDS Desal_0048 NC_012881.1 51861 52178 D KEGG: mno:Mnod_7213 hypothetical protein; hypothetical protein 51861..52178 Desulfovibrio salexigens DSM 2638 8092189 YP_002989660.1 CDS Desal_0049 NC_012881.1 52178 52834 D KEGG: mno:Mnod_7212 ATPase involved in DNA repair-like protein; hypothetical protein 52178..52834 Desulfovibrio salexigens DSM 2638 8092190 YP_002989661.1 CDS Desal_0051 NC_012881.1 53356 54948 D PFAM: glycosyl transferase family 39; KEGG: dde:Dde_3122 dolichyl-phosphate-mannose-protein mannosyltransferase family protein; glycosyl transferase family protein 53356..54948 Desulfovibrio salexigens DSM 2638 8092192 YP_002989662.1 CDS Desal_0052 NC_012881.1 55234 55470 D TIGRFAM: DNA binding domain protein, excisionase family; KEGG: dvl:Dvul_0085 DNA binding domain-containing protein; excisionase family DNA binding domain-containing protein 55234..55470 Desulfovibrio salexigens DSM 2638 8092193 YP_002989663.1 CDS Desal_0053 NC_012881.1 55493 55876 D KEGG: dvm:DvMF_1369 hypothetical protein; hypothetical protein 55493..55876 Desulfovibrio salexigens DSM 2638 8092194 YP_002989664.1 CDS Desal_0054 NC_012881.1 55978 56634 R KEGG: vpa:VP0124 hypothetical protein; hypothetical protein complement(55978..56634) Desulfovibrio salexigens DSM 2638 8092195 YP_002989665.1 CDS Desal_0055 NC_012881.1 56786 57913 R TIGRFAM: methyltransferase FkbM family; KEGG: ade:Adeh_2528 methyltransferase FkbM; FkbM family methyltransferase complement(56786..57913) Desulfovibrio salexigens DSM 2638 8092196 YP_002989666.1 CDS Desal_0056 NC_012881.1 57988 58482 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: dvl:Dvul_1291 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(57988..58482) Desulfovibrio salexigens DSM 2638 8092197 YP_002989667.1 CDS Desal_0057 NC_012881.1 58739 59146 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pca:Pcar_0508 hemerythrin; hemerythrin-like metal-binding protein 58739..59146 Desulfovibrio salexigens DSM 2638 8092198 YP_002989668.1 CDS Desal_0058 NC_012881.1 59217 59567 R PFAM: heat shock protein Hsp20; KEGG: dvm:DvMF_2959 heat shock protein HSP20; heat shock protein Hsp20 complement(59217..59567) Desulfovibrio salexigens DSM 2638 8092199 YP_002989669.1 CDS Desal_0059 NC_012881.1 59580 59993 R PFAM: heat shock protein Hsp20; KEGG: dvm:DvMF_2958 heat shock protein HSP20; heat shock protein Hsp20 complement(59580..59993) Desulfovibrio salexigens DSM 2638 8092200 YP_002989670.1 CDS Desal_0060 NC_012881.1 60186 60617 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dde:Dde_2668 peptidyl-prolyl cis-trans isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase complement(60186..60617) Desulfovibrio salexigens DSM 2638 8092201 YP_002989671.1 CDS Desal_0061 NC_012881.1 60682 60867 R PFAM: protein of unknown function DUF343; KEGG: dvu:DVU0656 hypothetical protein; hypothetical protein complement(60682..60867) Desulfovibrio salexigens DSM 2638 8092202 YP_002989672.1 CDS Desal_0062 NC_012881.1 60964 61821 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dds:Ddes_1744 PHP domain protein; PHP domain-containing protein 60964..61821 Desulfovibrio salexigens DSM 2638 8092203 YP_002989673.1 CDS Desal_0063 NC_012881.1 61842 63122 D PFAM: peptidase U32; KEGG: dde:Dde_3095 U32 family peptidase; peptidase U32 61842..63122 Desulfovibrio salexigens DSM 2638 8092204 YP_002989674.1 CDS Desal_0064 NC_012881.1 63344 64021 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dvm:DvMF_2848 CBS domain containing membrane protein; hypothetical protein 63344..64021 Desulfovibrio salexigens DSM 2638 8092205 YP_002989675.1 CDS Desal_0065 NC_012881.1 70556 71038 R PFAM: SEC-C motif domain protein; KEGG: dal:Dalk_1685 sec-C motif domain protein; SEC-C motif domain protein complement(70556..71038) Desulfovibrio salexigens DSM 2638 8092211 YP_002989676.1 CDS Desal_0066 NC_012881.1 71094 71453 R PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dde:Dde_0204 hypothetical protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(71094..71453) Desulfovibrio salexigens DSM 2638 8092212 YP_002989677.1 CDS Desal_0067 NC_012881.1 71566 71982 D PFAM: class I peptide chain release factor; KEGG: sfu:Sfum_2311 class I peptide chain release factor; class I peptide chain release factor 71566..71982 Desulfovibrio salexigens DSM 2638 8092213 YP_002989678.1 CDS Desal_0068 NC_012881.1 72067 72585 D PFAM: OmpA/MotB domain protein; KEGG: nam:NAMH_1356 major outer membrane protein; OmpA/MotB domain-containing protein 72067..72585 Desulfovibrio salexigens DSM 2638 8092214 YP_002989679.1 CDS Desal_0069 NC_012881.1 72652 73233 D PFAM: regulatory protein TetR; KEGG: sbp:Sbal223_2834 transcriptional regulator, TetR family; TetR family transcriptional regulator 72652..73233 Desulfovibrio salexigens DSM 2638 8092215 YP_002989680.1 CDS Desal_0070 NC_012881.1 73303 74409 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dde:Dde_0671 secretion protein HlyD; RND family efflux transporter MFP subunit 73303..74409 Desulfovibrio salexigens DSM 2638 8092216 YP_002989681.1 CDS Desal_0071 NC_012881.1 74406 77438 D PFAM: acriflavin resistance protein; KEGG: dde:Dde_0670 AcrB/AcrD/AcrF family transporter; acriflavin resistance protein 74406..77438 Desulfovibrio salexigens DSM 2638 8092217 YP_002989682.1 CDS Desal_0072 NC_012881.1 77497 78105 R PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: dde:Dde_1625 formylmethanofuran dehydrogenase, subunit E; formylmethanofuran dehydrogenase subunit E complement(77497..78105) Desulfovibrio salexigens DSM 2638 8092218 YP_002989683.1 CDS Desal_0073 NC_012881.1 78109 78927 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_1624 ATPase; ABC transporter complement(78109..78927) Desulfovibrio salexigens DSM 2638 8092219 YP_002989684.1 CDS Desal_0074 NC_012881.1 78924 79991 R PFAM: ABC transporter permease; ABC transporter; KEGG: dde:Dde_1623 iron(III) dicitrate ABC transporter permease; ABC transporter permease complement(78924..79991) Desulfovibrio salexigens DSM 2638 8092220 YP_002989685.1 CDS Desal_0075 NC_012881.1 79995 81104 R PFAM: periplasmic binding protein; KEGG: dal:Dalk_5080 periplasmic binding protein; periplasmic binding protein complement(79995..81104) Desulfovibrio salexigens DSM 2638 8092221 YP_002989686.1 CDS Desal_0076 NC_012881.1 81263 81529 R KEGG: hch:HCH_01938 uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis; arylsulfate sulfotransferase complement(81263..81529) Desulfovibrio salexigens DSM 2638 8090815 YP_002989687.1 CDS Desal_0077 NC_012881.1 81567 82124 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pau:PA14_56370 hypothetical protein; Pfpi family intracellular protease complement(81567..82124) Desulfovibrio salexigens DSM 2638 8090816 YP_002989688.1 CDS Desal_0078 NC_012881.1 82375 83154 D KEGG: dvm:DvMF_0796 calcium-binding EF-hand-containing protein; hypothetical protein 82375..83154 Desulfovibrio salexigens DSM 2638 8090817 YP_002989689.1 CDS Desal_0079 NC_012881.1 83398 87204 D SMART: integrin; KEGG: hypothetical protein; integrin 83398..87204 Desulfovibrio salexigens DSM 2638 8090818 YP_002989690.1 CDS Desal_0080 NC_012881.1 87256 89208 R KEGG: gur:Gura_0744 integral membrane sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Diverse 7TM receptor transmembrane region; glycoside hydrolase family 2 sugar binding; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein complement(87256..89208) Desulfovibrio salexigens DSM 2638 8090819 YP_002989691.1 CDS Desal_0081 NC_012881.1 89357 89863 R PFAM: Ferritin Dps family protein; KEGG: dvm:DvMF_0183 ferroxidase; ferroxidase complement(89357..89863) Desulfovibrio salexigens DSM 2638 8090820 YP_002989692.1 CDS Desal_0082 NC_012881.1 89896 90909 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: dde:Dde_3205 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase, subunit II complement(89896..90909) Desulfovibrio salexigens DSM 2638 8090821 YP_002989693.1 CDS Desal_0083 NC_012881.1 90936 92249 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dde:Dde_3204 cytochrome d ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(90936..92249) Desulfovibrio salexigens DSM 2638 8090822 YP_002989694.1 CDS Desal_0084 NC_012881.1 92278 92976 R KEGG: dal:Dalk_2376 hypothetical protein; hypothetical protein complement(92278..92976) Desulfovibrio salexigens DSM 2638 8090823 YP_002989695.1 CDS Desal_0085 NC_012881.1 93147 94352 R PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: dde:Dde_3195 rubredoxin-oxygen oxidoreductase; beta-lactamase complement(93147..94352) Desulfovibrio salexigens DSM 2638 8090824 YP_002989696.1 CDS Desal_0086 NC_012881.1 94472 94630 R PFAM: rubredoxin-type Fe(Cys)4 protein; KEGG: dal:Dalk_2372 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(94472..94630) Desulfovibrio salexigens DSM 2638 8090825 YP_002989697.1 CDS Desal_0087 NC_012881.1 94655 94834 R PFAM: rubredoxin-type Fe(Cys)4 protein; KEGG: dol:Dole_2644 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(94655..94834) Desulfovibrio salexigens DSM 2638 8090826 YP_002989698.1 CDS Desal_0088 NC_012881.1 94849 95232 R TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; KEGG: dvl:Dvul_0204 desulfoferrodoxin; desulfoferrodoxin complement(94849..95232) Desulfovibrio salexigens DSM 2638 8090827 YP_002989699.1 CDS Desal_0089 NC_012881.1 95264 95839 R PFAM: rubrerythrin; KEGG: dal:Dalk_2366 rubrerythrin; rubrerythrin complement(95264..95839) Desulfovibrio salexigens DSM 2638 8090828 YP_002989700.1 CDS Desal_0090 NC_012881.1 96001 96390 R PFAM: ferric-uptake regulator; KEGG: dde:Dde_3674 ferric uptake regulator family protein; ferric uptake regulator, Fur family complement(96001..96390) Desulfovibrio salexigens DSM 2638 8090829 YP_002989701.1 CDS Desal_0091 NC_012881.1 96583 97449 D PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: dde:Dde_2822 response regulator receiver domain-containing protein; LytR family transcriptional regulator 96583..97449 Desulfovibrio salexigens DSM 2638 8090830 YP_002989702.1 CDS Desal_0092 NC_012881.1 97606 99474 D TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: dvl:Dvul_2222 acetate--CoA ligase; acetate/CoA ligase 97606..99474 Desulfovibrio salexigens DSM 2638 8090831 YP_002989703.1 CDS Desal_0093 NC_012881.1 99581 100258 R PFAM: protein of unknown function DUF47; KEGG: dde:Dde_3780 phosphate transport regulator-like; hypothetical protein complement(99581..100258) Desulfovibrio salexigens DSM 2638 8090832 YP_002989704.1 CDS Desal_0094 NC_012881.1 100278 101513 R PFAM: phosphate transporter; KEGG: dde:Dde_3781 sodium/phosphate symporter; phosphate transporter complement(100278..101513) Desulfovibrio salexigens DSM 2638 8090833 YP_002989705.1 CDS Desal_0095 NC_012881.1 101513 103333 R KEGG: dvm:DvMF_2133 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; PAS/PAC sensor signal transduction histidine kinase complement(101513..103333) Desulfovibrio salexigens DSM 2638 8090834 YP_002989706.1 CDS Desal_0096 NC_012881.1 103657 103899 D KEGG: dde:Dde_1017 hypothetical protein; hypothetical protein 103657..103899 Desulfovibrio salexigens DSM 2638 8090835 YP_002989707.1 CDS Desal_0097 NC_012881.1 103910 106591 R PFAM: surface antigen variable number repeat protein; KEGG: pmy:Pmen_1058 TPR repeat-containing protein; cyclic nucleotide-binding protein complement(103910..106591) Desulfovibrio salexigens DSM 2638 8090836 YP_002989708.1 CDS Desal_0098 NC_012881.1 106758 108692 D PFAM: glycosyl transferase family 39; KEGG: amc:MADE_00382 glycosyl transferase, family 39; glycosyl transferase family protein 106758..108692 Desulfovibrio salexigens DSM 2638 8090837 YP_002989709.1 CDS Desal_0099 NC_012881.1 108692 109747 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 108692..109747 Desulfovibrio salexigens DSM 2638 8090838 YP_002989710.1 CDS Desal_0100 NC_012881.1 109873 110586 R PFAM: FeoA family protein; KEGG: dde:Dde_0496 hypothetical protein; FeoA family protein complement(109873..110586) Desulfovibrio salexigens DSM 2638 8090839 YP_002989711.1 CDS Desal_0101 NC_012881.1 110586 112706 R TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; KEGG: dde:Dde_0495 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(110586..112706) Desulfovibrio salexigens DSM 2638 8090840 YP_002989712.1 CDS Desal_0102 NC_012881.1 112703 112969 R hypothetical protein complement(112703..112969) Desulfovibrio salexigens DSM 2638 8090841 YP_002989713.1 CDS Desal_0103 NC_012881.1 113190 113507 R KEGG: dde:Dde_0493 hypothetical protein; hypothetical protein complement(113190..113507) Desulfovibrio salexigens DSM 2638 8090842 YP_002989714.1 CDS Desal_0104 NC_012881.1 113511 114221 R KEGG: GH16738 gene product from transcript GH16738-RA; hypothetical protein complement(113511..114221) Desulfovibrio salexigens DSM 2638 8090843 YP_002989715.1 CDS Desal_0105 NC_012881.1 114251 114565 R KEGG: dde:Dde_0490 hypothetical protein; hypothetical protein complement(114251..114565) Desulfovibrio salexigens DSM 2638 8090844 YP_002989716.1 CDS Desal_0106 NC_012881.1 114543 116750 R TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; KEGG: dde:Dde_0489 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(114543..116750) Desulfovibrio salexigens DSM 2638 8090845 YP_002989717.1 CDS Desal_0107 NC_012881.1 116946 117290 R KEGG: dde:Dde_0492 hypothetical protein; hypothetical protein complement(116946..117290) Desulfovibrio salexigens DSM 2638 8090846 YP_002989718.1 CDS Desal_0108 NC_012881.1 117501 117932 D PFAM: ferric-uptake regulator; KEGG: dvl:Dvul_2043 ferric uptake regulator family protein; ferric uptake regulator, Fur family 117501..117932 Desulfovibrio salexigens DSM 2638 8090847 YP_002989719.1 CDS Desal_0109 NC_012881.1 118038 118259 D KEGG: dde:Dde_0499 hypothetical protein; hypothetical protein 118038..118259 Desulfovibrio salexigens DSM 2638 8090848 YP_002989720.1 CDS Desal_0110 NC_012881.1 118278 119282 R KEGG: dvm:DvMF_1514 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(118278..119282) Desulfovibrio salexigens DSM 2638 8090849 YP_002989721.1 CDS Desal_0111 NC_012881.1 119552 119884 D PFAM: FeoA family protein; KEGG: avn:Avin_22720 ferrous iron transport protein A; FeoA family protein 119552..119884 Desulfovibrio salexigens DSM 2638 8090850 YP_002989722.1 CDS Desal_0112 NC_012881.1 119874 122408 D TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; KEGG: dal:Dalk_2738 ferrous iron transport protein B; small GTP-binding protein 119874..122408 Desulfovibrio salexigens DSM 2638 8090851 YP_002989723.1 CDS Desal_0113 NC_012881.1 122429 122752 D KEGG: dds:Ddes_0647 hypothetical protein; hypothetical protein 122429..122752 Desulfovibrio salexigens DSM 2638 8090852 YP_002989724.1 CDS Desal_0114 NC_012881.1 122870 123694 D KEGG: dds:Ddes_0648 hypothetical protein; hypothetical protein 122870..123694 Desulfovibrio salexigens DSM 2638 8090853 YP_002989725.1 CDS Desal_0115 NC_012881.1 123759 124970 R KEGG: hha:Hhal_1598 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: haloacid dehalogenase; amino acid-binding ACT domain protein; HAD-superfamily hydrolase subfamily IB hypothetical 1; haloacid dehalogenase type 3; phosphoserine phosphatase SerB complement(123759..124970) Desulfovibrio salexigens DSM 2638 8090854 YP_002989726.1 CDS Desal_0116 NC_012881.1 125160 126551 D PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: dvm:DvMF_2789 histidine kinase; histidine kinase 125160..126551 Desulfovibrio salexigens DSM 2638 8090855 YP_002989727.1 CDS Desal_0117 NC_012881.1 126920 127606 D PFAM: CI repressor; peptidase S24 and S26 domain protein; KEGG: dvm:DvMF_2676 phage repressor; phage repressor 126920..127606 Desulfovibrio salexigens DSM 2638 8090856 YP_002989728.1 CDS Desal_0118 NC_012881.1 127775 128623 D KEGG: sfu:Sfum_2737 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 127775..128623 Desulfovibrio salexigens DSM 2638 8090857 YP_002989729.1 CDS Desal_0119 NC_012881.1 128709 128978 D hypothetical protein 128709..128978 Desulfovibrio salexigens DSM 2638 8090858 YP_002989730.1 CDS Desal_0120 NC_012881.1 128985 129944 D PFAM: nucleoside recognition domain protein; KEGG: dvm:DvMF_2667 hypothetical protein; nucleoside recognition domain-containing protein 128985..129944 Desulfovibrio salexigens DSM 2638 8090859 YP_002989731.1 CDS Desal_0121 NC_012881.1 130021 131181 R hypothetical protein complement(130021..131181) Desulfovibrio salexigens DSM 2638 8090860 YP_002989732.1 CDS Desal_0122 NC_012881.1 131222 131818 R PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; KEGG: dde:Dde_2388 3'-5' exonuclease; 3'-5' exonuclease complement(131222..131818) Desulfovibrio salexigens DSM 2638 8090861 YP_002989733.1 CDS Desal_0123 NC_012881.1 132133 133734 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: pca:Pcar_0583 peptide chain release factor 3; peptide chain release factor 3 complement(132133..133734) Desulfovibrio salexigens DSM 2638 8090862 YP_002989734.1 CDS Desal_0124 NC_012881.1 133956 134930 D hypothetical protein 133956..134930 Desulfovibrio salexigens DSM 2638 8090863 YP_002989735.1 CDS Desal_0125 NC_012881.1 134945 141346 R KEGG: bpy:Bphyt_1683 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; tyrosine protein kinase; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; serine/threonine protein kinase; PAC repeat-containing protein; GAF domain protein; PAS sensor protein complement(134945..141346) Desulfovibrio salexigens DSM 2638 8090864 YP_002989736.1 CDS Desal_0126 NC_012881.1 141536 142558 R PFAM: high-affinity nickel-transporter; KEGG: dde:Dde_0285 ABC-type uncharacterized transport system permease component-like; nickel ABC transporter permease complement(141536..142558) Desulfovibrio salexigens DSM 2638 8090865 YP_002989737.1 CDS Desal_0127 NC_012881.1 142566 143168 R KEGG: dde:Dde_0284 ABC-type uncharacterized transport system periplasmic component-like; ABC transporter substrate-binding protein complement(142566..143168) Desulfovibrio salexigens DSM 2638 8090866 YP_002989738.1 CDS Desal_0128 NC_012881.1 143270 143854 R PFAM: regulatory protein TetR; KEGG: dde:Dde_2002 TetR family transcriptional regulator; TetR family transcriptional regulator complement(143270..143854) Desulfovibrio salexigens DSM 2638 8090867 YP_002989739.1 CDS Desal_0129 NC_012881.1 144133 146685 D TIGRFAM: YD repeat protein; KEGG: sfu:Sfum_4063 NHL repeat containing protein; YD repeat protein 144133..146685 Desulfovibrio salexigens DSM 2638 8090868 YP_002989740.1 CDS Desal_0130 NC_012881.1 146657 147073 D KEGG: dal:Dalk_0272 hypothetical protein; hypothetical protein 146657..147073 Desulfovibrio salexigens DSM 2638 8090869 YP_002989741.1 CDS Desal_0131 NC_012881.1 147194 147493 D hypothetical protein 147194..147493 Desulfovibrio salexigens DSM 2638 8090870 YP_002989742.1 CDS Desal_0132 NC_012881.1 147520 148158 R PFAM: regulatory protein TetR; KEGG: dal:Dalk_2333 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(147520..148158) Desulfovibrio salexigens DSM 2638 8090871 YP_002989743.1 CDS Desal_0133 NC_012881.1 148339 149430 D catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 148339..149430 Desulfovibrio salexigens DSM 2638 8090872 YP_002989744.1 CDS Desal_0134 NC_012881.1 149697 150536 D TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: dde:Dde_3078 Fe-S cluster assembly protein NifU; Fe-S cluster assembly protein NifU 149697..150536 Desulfovibrio salexigens DSM 2638 8090873 YP_002989745.1 CDS Desal_0135 NC_012881.1 150539 151729 D KEGG: dvm:DvMF_2659 cysteine desulfurase NifS; TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; cysteine desulfurase NifS 150539..151729 Desulfovibrio salexigens DSM 2638 8090874 YP_002989746.1 CDS Desal_0136 NC_012881.1 151835 152758 D TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gme:Gmet_1558 cysteine synthase; cysteine synthase A 151835..152758 Desulfovibrio salexigens DSM 2638 8090875 YP_002989747.1 CDS Desal_0137 NC_012881.1 152769 153653 D PFAM: transferase hexapeptide repeat containing protein; KEGG: dvu:DVU0662 serine O-acetyltransferase; serine O-acetyltransferase 152769..153653 Desulfovibrio salexigens DSM 2638 8090876 YP_002989748.1 CDS Desal_0138 NC_012881.1 153736 154029 R PFAM: plasmid stabilization system; KEGG: eca:ECA2758 hypothetical protein; plasmid stabilization protein complement(153736..154029) Desulfovibrio salexigens DSM 2638 8090877 YP_002989749.1 CDS Desal_0139 NC_012881.1 154019 154264 R KEGG: eca:ECA2757 hypothetical protein; hypothetical protein complement(154019..154264) Desulfovibrio salexigens DSM 2638 8090878 YP_002989750.1 CDS Desal_0140 NC_012881.1 154393 155298 R PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: glo:Glov_1080 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 complement(154393..155298) Desulfovibrio salexigens DSM 2638 8090879 YP_002989751.1 CDS Desal_0141 NC_012881.1 155334 155804 R KEGG: smt:Smal_3995 hypothetical protein; hypothetical protein complement(155334..155804) Desulfovibrio salexigens DSM 2638 8090880 YP_002989752.1 CDS hisS NC_012881.1 156086 157324 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 156086..157324 Desulfovibrio salexigens DSM 2638 8090881 YP_002989753.1 CDS aspS NC_012881.1 157357 159180 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 157357..159180 Desulfovibrio salexigens DSM 2638 8090882 YP_002989754.1 CDS Desal_0144 NC_012881.1 159524 160036 D KEGG: dvl:Dvul_0029 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 159524..160036 Desulfovibrio salexigens DSM 2638 8090883 YP_002989755.1 CDS Desal_0145 NC_012881.1 160012 160962 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: dvl:Dvul_0030 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 160012..160962 Desulfovibrio salexigens DSM 2638 8090884 YP_002989756.1 CDS Desal_0146 NC_012881.1 160978 161796 D PFAM: protein of unknown function DUF116; KEGG: dvl:Dvul_0031 hypothetical protein; hypothetical protein 160978..161796 Desulfovibrio salexigens DSM 2638 8090885 YP_002989757.1 CDS Desal_0147 NC_012881.1 161812 163095 D PFAM: NusB/RsmB/TIM44; Fmu (Sun) domain protein; KEGG: dde:Dde_0017 sun protein; NusB/RsmB/TIM44 161812..163095 Desulfovibrio salexigens DSM 2638 8090886 YP_002989758.1 CDS Desal_0148 NC_012881.1 163158 163919 R PFAM: TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dvm:DvMF_1136 hypothetical protein; hypothetical protein complement(163158..163919) Desulfovibrio salexigens DSM 2638 8090887 YP_002989759.1 CDS Desal_0149 NC_012881.1 164244 164810 D PFAM: cupin; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sfu:Sfum_0869 transcriptional regulator, XRE family; XRE family transcriptional regulator 164244..164810 Desulfovibrio salexigens DSM 2638 8090888 YP_002989760.1 CDS Desal_0150 NC_012881.1 164823 166469 D PFAM: AMP-dependent synthetase and ligase; KEGG: dal:Dalk_3272 AMP-dependent synthetase and ligase; AMP-binding protein 164823..166469 Desulfovibrio salexigens DSM 2638 8090889 YP_002989761.1 CDS Desal_0151 NC_012881.1 166710 167267 D PFAM: cupin; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dvl:Dvul_0992 cupin 2 domain-containing protein; XRE family transcriptional regulator 166710..167267 Desulfovibrio salexigens DSM 2638 8090890 YP_002989762.1 CDS Desal_0152 NC_012881.1 167470 169116 D PFAM: AMP-dependent synthetase and ligase; KEGG: dde:Dde_2317 AMP-binding protein; AMP-dependent synthetase and ligase 167470..169116 Desulfovibrio salexigens DSM 2638 8090891 YP_002989763.1 CDS Desal_0153 NC_012881.1 169303 169830 R KEGG: hch:HCH_00875 hypothetical protein; hypothetical protein complement(169303..169830) Desulfovibrio salexigens DSM 2638 8090892 YP_002989764.1 CDS Desal_0154 NC_012881.1 170016 171329 D PFAM: methyltransferase type 11; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: geo:Geob_2054 transcriptional regulator, MerR family; MerR family transcriptional regulator 170016..171329 Desulfovibrio salexigens DSM 2638 8090893 YP_002989765.1 CDS Desal_0156 NC_012881.1 171756 172211 D KEGG: tau:Tola_1401 protein of unknown function DUF307; hypothetical protein 171756..172211 Desulfovibrio salexigens DSM 2638 8090895 YP_002989766.1 CDS Desal_0157 NC_012881.1 172332 173099 D PFAM: filamentation induced by cAMP protein Fic; KEGG: rfe:RF_1308 Fic; filamentation induced by cAMP protein fic 172332..173099 Desulfovibrio salexigens DSM 2638 8091206 YP_002989767.1 CDS Desal_0158 NC_012881.1 173201 173713 D KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein 173201..173713 Desulfovibrio salexigens DSM 2638 8091207 YP_002989768.1 CDS Desal_0159 NC_012881.1 173856 174782 R PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: dde:Dde_0539 protein-L-isoaspartate methyltransferase-like; tRNA (adenine-N(1)-)-methyltransferase complement(173856..174782) Desulfovibrio salexigens DSM 2638 8091208 YP_002989769.1 CDS Desal_0160 NC_012881.1 175110 176096 D PFAM: radical SAM domain protein; KEGG: dde:Dde_0538 radical SAM domain-containing protein; radical SAM domain protein 175110..176096 Desulfovibrio salexigens DSM 2638 8091209 YP_002989770.1 CDS Desal_0161 NC_012881.1 176148 177620 D KEGG: dde:Dde_0537 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; ribonuclease, Rne/Rng family 176148..177620 Desulfovibrio salexigens DSM 2638 8091210 YP_002989771.1 CDS Desal_0162 NC_012881.1 177675 178229 D PFAM: protein of unknown function DUF208; KEGG: dvm:DvMF_2375 protein of unknown function DUF208; hypothetical protein 177675..178229 Desulfovibrio salexigens DSM 2638 8091211 YP_002989772.1 CDS Desal_0163 NC_012881.1 178333 179166 D PFAM: UspA domain protein; KEGG: dde:Dde_2827 hypothetical protein; UspA domain-containing protein 178333..179166 Desulfovibrio salexigens DSM 2638 8091212 YP_002989773.1 CDS Desal_0164 NC_012881.1 179237 180433 D KEGG: dde:Dde_0536 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 179237..180433 Desulfovibrio salexigens DSM 2638 8091213 YP_002989774.1 CDS Desal_0165 NC_012881.1 180441 181559 R hypothetical protein complement(180441..181559) Desulfovibrio salexigens DSM 2638 8091214 YP_002989775.1 CDS Desal_0166 NC_012881.1 181559 183082 R PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: dal:Dalk_3477 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 complement(181559..183082) Desulfovibrio salexigens DSM 2638 8091215 YP_002989776.1 CDS Desal_0167 NC_012881.1 183102 184001 R PFAM: protein of unknown function DUF323; KEGG: sfu:Sfum_0556 peptidase C14, caspase catalytic subunit P20; hypothetical protein complement(183102..184001) Desulfovibrio salexigens DSM 2638 8091216 YP_002989777.1 CDS Desal_0168 NC_012881.1 184019 184858 R PFAM: protein of unknown function DUF323; KEGG: dal:Dalk_3476 protein of unknown function DUF323; hypothetical protein complement(184019..184858) Desulfovibrio salexigens DSM 2638 8091217 YP_002989778.1 CDS Desal_0169 NC_012881.1 184982 186109 R KEGG: cko:CKO_00754 hypothetical protein; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; UDP-galactopyranose mutase complement(184982..186109) Desulfovibrio salexigens DSM 2638 8091218 YP_002989779.1 CDS Desal_0170 NC_012881.1 186195 187052 R KEGG: dde:Dde_2947 HflC protein; TIGRFAM: HflC protein; PFAM: band 7 protein; SMART: band 7 protein; HflC protein complement(186195..187052) Desulfovibrio salexigens DSM 2638 8091219 YP_002989780.1 CDS Desal_0171 NC_012881.1 187063 188166 R KEGG: dvl:Dvul_2279 HflK protein; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein; HflK protein complement(187063..188166) Desulfovibrio salexigens DSM 2638 8091220 YP_002989781.1 CDS Desal_0172 NC_012881.1 188362 189387 R PFAM: radical SAM domain protein; KEGG: bgl:bglu_2g06740 hypothetical protein; radical SAM domain protein complement(188362..189387) Desulfovibrio salexigens DSM 2638 8091221 YP_002989782.1 CDS Desal_0173 NC_012881.1 189526 190893 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: dde:Dde_2945 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 189526..190893 Desulfovibrio salexigens DSM 2638 8091222 YP_002989783.1 CDS Desal_0174 NC_012881.1 190992 191561 D KEGG: dde:Dde_2942 hypothetical protein; hypothetical protein 190992..191561 Desulfovibrio salexigens DSM 2638 8091223 YP_002989784.1 CDS Desal_0175 NC_012881.1 191570 192034 D PFAM: ribonuclease H; KEGG: dvl:Dvul_2274 ribonuclease H; ribonuclease H 191570..192034 Desulfovibrio salexigens DSM 2638 8091224 YP_002989785.1 CDS Desal_0176 NC_012881.1 192188 193633 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; KEGG: ecg:E2348C_0643 phosphotransferase; HAD-superfamily hydrolase complement(192188..193633) Desulfovibrio salexigens DSM 2638 8091225 YP_002989786.1 CDS Desal_0177 NC_012881.1 193976 194647 R TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: dvm:DvMF_0909 cytidylate kinase; cytidylate kinase complement(193976..194647) Desulfovibrio salexigens DSM 2638 8091226 YP_002989787.1 CDS Desal_0178 NC_012881.1 194647 195741 R TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: dvl:Dvul_1964 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(194647..195741) Desulfovibrio salexigens DSM 2638 8091227 YP_002989788.1 CDS Desal_0179 NC_012881.1 196405 197517 D TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: dal:Dalk_0200 GTPase EngC; ribosome small subunit-dependent GTPase A 196405..197517 Desulfovibrio salexigens DSM 2638 8091228 YP_002989789.1 CDS Desal_0180 NC_012881.1 197623 198063 R PFAM: UspA domain protein; KEGG: dvm:DvMF_0906 UspA domain protein; UspA domain-containing protein complement(197623..198063) Desulfovibrio salexigens DSM 2638 8091229 YP_002989790.1 CDS Desal_0181 NC_012881.1 198352 198840 D KEGG: dvl:Dvul_1962 hypothetical protein; hypothetical protein 198352..198840 Desulfovibrio salexigens DSM 2638 8091230 YP_002989791.1 CDS Desal_0182 NC_012881.1 199099 200271 R PFAM: polysulphide reductase NrfD; KEGG: dvu:DVU1286 reductase, transmembrane subunit; polysulfide reductase NrfD complement(199099..200271) Desulfovibrio salexigens DSM 2638 8091231 YP_002989792.1 CDS Desal_0183 NC_012881.1 200286 201065 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2274 reductase, iron-sulfur binding subunit; 4Fe-4S ferredoxin complement(200286..201065) Desulfovibrio salexigens DSM 2638 8091232 YP_002989793.1 CDS Desal_0184 NC_012881.1 201065 201442 R KEGG: dde:Dde_2273 cytochrome c family protein; cytochrome c family protein complement(201065..201442) Desulfovibrio salexigens DSM 2638 8091233 YP_002989794.1 CDS Desal_0185 NC_012881.1 201446 203053 R KEGG: dde:Dde_2272 reductase, iron-sulfur binding subunit; reductase, iron-sulfur binding subunit complement(201446..203053) Desulfovibrio salexigens DSM 2638 8091234 YP_002989795.1 CDS Desal_0186 NC_012881.1 203112 204107 R PFAM: nitrate reductase subunit gamma; KEGG: dvm:DvMF_0070 nitrate reductase gamma subunit; nitrate reductase subunit gamma complement(203112..204107) Desulfovibrio salexigens DSM 2638 8091235 YP_002989796.1 CDS Desal_0187 NC_012881.1 204155 204685 R KEGG: sfu:Sfum_1145 hypothetical protein; hypothetical protein complement(204155..204685) Desulfovibrio salexigens DSM 2638 8091236 YP_002989797.1 CDS Desal_0188 NC_012881.1 205062 205781 D TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; KEGG: dvl:Dvul_0164 sugar fermentation stimulation protein; sugar fermentation stimulation protein 205062..205781 Desulfovibrio salexigens DSM 2638 8091237 YP_002989798.1 CDS Desal_0189 NC_012881.1 206072 206575 R PFAM: thioesterase superfamily protein; KEGG: dvm:DvMF_2309 thioesterase superfamily protein; thioesterase superfamily protein complement(206072..206575) Desulfovibrio salexigens DSM 2638 8091238 YP_002989799.1 CDS Desal_0190 NC_012881.1 206660 206896 R KEGG: dde:Dde_3593 hypothetical protein; hypothetical protein complement(206660..206896) Desulfovibrio salexigens DSM 2638 8091239 YP_002989800.1 CDS Desal_0191 NC_012881.1 207153 208316 R hypothetical protein complement(207153..208316) Desulfovibrio salexigens DSM 2638 8091240 YP_002989801.1 CDS Desal_0192 NC_012881.1 208382 209470 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gbm:Gbem_2927 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein complement(208382..209470) Desulfovibrio salexigens DSM 2638 8091241 YP_002989802.1 CDS Desal_0193 NC_012881.1 209495 210064 R hypothetical protein complement(209495..210064) Desulfovibrio salexigens DSM 2638 8091242 YP_002989803.1 CDS Desal_0194 NC_012881.1 210342 211859 D KEGG: dvm:DvMF_2888 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA; signal recognition particle protein 210342..211859 Desulfovibrio salexigens DSM 2638 8091243 YP_002989804.1 CDS Desal_0195 NC_012881.1 211932 212168 D TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: dde:Dde_1099 30S ribosomal protein S16; 30S ribosomal protein S16 211932..212168 Desulfovibrio salexigens DSM 2638 8091244 YP_002989805.1 CDS Desal_0196 NC_012881.1 212247 212480 D KEGG: dde:Dde_1098 hypothetical protein; hypothetical protein 212247..212480 Desulfovibrio salexigens DSM 2638 8091245 YP_002989806.1 CDS Desal_0197 NC_012881.1 212515 213072 D TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: dde:Dde_1097 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 212515..213072 Desulfovibrio salexigens DSM 2638 8091246 YP_002989807.1 CDS Desal_0198 NC_012881.1 213114 214424 D KEGG: dde:Dde_1096 tRNA (guanine37-N1) methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 213114..214424 Desulfovibrio salexigens DSM 2638 8091247 YP_002989808.1 CDS rplS NC_012881.1 214471 214821 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 214471..214821 Desulfovibrio salexigens DSM 2638 8091248 YP_002989809.1 CDS Desal_0200 NC_012881.1 214969 215625 D PFAM: ribonuclease HII/HIII; KEGG: dds:Ddes_1791 ribonuclease H; ribonuclease H 214969..215625 Desulfovibrio salexigens DSM 2638 8091249 YP_002989810.1 CDS Desal_0201 NC_012881.1 215607 216011 D PFAM: protein of unknown function UPF0102; KEGG: dvl:Dvul_2148 hypothetical protein; hypothetical protein 215607..216011 Desulfovibrio salexigens DSM 2638 8091250 YP_002989811.1 CDS Desal_0202 NC_012881.1 215953 216795 D PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dde:Dde_1092 hypothetical protein; uroporphyrin-III C/tetrapyrrole methyltransferase 215953..216795 Desulfovibrio salexigens DSM 2638 8091251 YP_002989812.1 CDS Desal_0203 NC_012881.1 216835 217017 R hypothetical protein complement(216835..217017) Desulfovibrio salexigens DSM 2638 8091252 YP_002989813.1 CDS Desal_0205 NC_012881.1 217602 217919 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: dvm:DvMF_2878 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 217602..217919 Desulfovibrio salexigens DSM 2638 8091254 YP_002989814.1 CDS Desal_0207 NC_012881.1 219715 220182 D TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: dde:Dde_1088 SsrA-binding protein; SsrA-binding protein 219715..220182 Desulfovibrio salexigens DSM 2638 8091256 YP_002989815.1 CDS Desal_0208 NC_012881.1 220288 220446 R hypothetical protein complement(220288..220446) Desulfovibrio salexigens DSM 2638 8091257 YP_002989816.1 CDS Desal_0209 NC_012881.1 220611 221492 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gur:Gura_1198 LysR family transcriptional regulator; LysR family transcriptional regulator 220611..221492 Desulfovibrio salexigens DSM 2638 8091258 YP_002989817.1 CDS Desal_0210 NC_012881.1 221603 222988 D PFAM: FAD linked oxidase domain protein; KEGG: dvu:DVU0827 glycolate oxidase, subunit GlcD; D-lactate dehydrogenase 221603..222988 Desulfovibrio salexigens DSM 2638 8091259 YP_002989818.1 CDS Desal_0211 NC_012881.1 222988 224136 D KEGG: dde:Dde_1085 glycolate oxidase, iron-sulfur subunit; glycolate oxidase, iron-sulfur subunit 222988..224136 Desulfovibrio salexigens DSM 2638 8091260 YP_002989819.1 CDS Desal_0212 NC_012881.1 224215 226728 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 224215..226728 Desulfovibrio salexigens DSM 2638 8091261 YP_002989820.1 CDS Desal_0213 NC_012881.1 226806 228827 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dde:Dde_1077 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(226806..228827) Desulfovibrio salexigens DSM 2638 8091262 YP_002989821.1 CDS Desal_0214 NC_012881.1 229095 229694 D PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pca:Pcar_3029 hypothetical protein; multiple antibiotic resistance (MarC)-like protein 229095..229694 Desulfovibrio salexigens DSM 2638 8091263 YP_002989822.1 CDS Desal_0215 NC_012881.1 229719 229940 D hypothetical protein 229719..229940 Desulfovibrio salexigens DSM 2638 8091264 YP_002989823.1 CDS Desal_0216 NC_012881.1 229999 230490 R TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: pca:Pcar_1503 phosphoesterase; phosphodiesterase, MJ0936 family complement(229999..230490) Desulfovibrio salexigens DSM 2638 8091265 YP_002989824.1 CDS Desal_0217 NC_012881.1 230496 231401 R PFAM: VacJ family lipoprotein; KEGG: sat:SYN_01266 surface lipoprotein; VacJ family lipoprotein complement(230496..231401) Desulfovibrio salexigens DSM 2638 8091266 YP_002989825.1 CDS Desal_0218 NC_012881.1 231414 232079 R PFAM: toluene tolerance family protein; KEGG: glo:Glov_3185 toluene tolerance family protein; toluene tolerance family protein complement(231414..232079) Desulfovibrio salexigens DSM 2638 8091267 YP_002989826.1 CDS Desal_0219 NC_012881.1 232114 232560 R PFAM: mammalian cell entry related domain protein; KEGG: dde:Dde_2299 ABC transport system substrate-binding protein; mammalian cell entry related domain protein complement(232114..232560) Desulfovibrio salexigens DSM 2638 8091268 YP_002989827.1 CDS Desal_0221 NC_012881.1 233427 234239 R PFAM: protein of unknown function DUF140; KEGG: dvu:DVU1246 hypothetical protein; hypothetical protein complement(233427..234239) Desulfovibrio salexigens DSM 2638 8091270 YP_002989828.1 CDS Desal_0222 NC_012881.1 234423 235040 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dde:Dde_1504 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(234423..235040) Desulfovibrio salexigens DSM 2638 8091271 YP_002989829.1 CDS argJ NC_012881.1 235077 236261 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(235077..236261) Desulfovibrio salexigens DSM 2638 8091272 YP_002989830.1 CDS Desal_0224 NC_012881.1 236448 238349 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: dde:Dde_1407 peptidyl-prolyl cis-trans isomerse domain-containing protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(236448..238349) Desulfovibrio salexigens DSM 2638 8091273 YP_002989831.1 CDS Desal_0225 NC_012881.1 238450 240366 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(238450..240366) Desulfovibrio salexigens DSM 2638 8091274 YP_002989832.1 CDS Desal_0226 NC_012881.1 240490 240744 R KEGG: dvm:DvMF_2890 hypothetical protein; hypothetical protein complement(240490..240744) Desulfovibrio salexigens DSM 2638 8091275 YP_002989833.1 CDS Desal_0227 NC_012881.1 240707 242347 R KEGG: dde:Dde_1106 5-enolpyruvylshikimate-3-phosphate synthase-like; 5-enolpyruvylshikimate-3-phosphate synthase-like protein complement(240707..242347) Desulfovibrio salexigens DSM 2638 8091276 YP_002989834.1 CDS Desal_0228 NC_012881.1 242528 243808 R KEGG: dps:DP1472 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; sulfate adenylyltransferase complement(242528..243808) Desulfovibrio salexigens DSM 2638 8091277 YP_002989835.1 CDS Desal_0229 NC_012881.1 244705 245190 D TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_1109 adenylylsulfate reductase subunit beta; adenylylsulfate reductase subunit beta 244705..245190 Desulfovibrio salexigens DSM 2638 8091278 YP_002989836.1 CDS Desal_0230 NC_012881.1 245259 247250 D catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite; adenylylsulfate reductase subunit alpha 245259..247250 Desulfovibrio salexigens DSM 2638 8091279 YP_002989837.1 CDS Desal_0231 NC_012881.1 247408 248646 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvm:DvMF_2894 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 247408..248646 Desulfovibrio salexigens DSM 2638 8091280 YP_002989838.1 CDS Desal_0232 NC_012881.1 248653 250926 D PFAM: methyl-viologen-reducing hydrogenase delta subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_2134 methyl-viologen-reducing hydrogenase, delta subunit; methyl-viologen-reducing hydrogenase delta subunit 248653..250926 Desulfovibrio salexigens DSM 2638 8091281 YP_002989839.1 CDS Desal_0233 NC_012881.1 250941 252161 D KEGG: dde:Dde_1113 heterodisulfide reductase, transmembrane subunit; heterodisulfide reductase, transmembrane subunit 250941..252161 Desulfovibrio salexigens DSM 2638 8091282 YP_002989840.1 CDS Desal_0234 NC_012881.1 252183 252869 D KEGG: dvl:Dvul_2132 hypothetical protein; hypothetical protein 252183..252869 Desulfovibrio salexigens DSM 2638 8091283 YP_002989841.1 CDS Desal_0235 NC_012881.1 253490 254245 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bbr:BB2028 ABC transport protein, ATP-binding component; ABC transporter 253490..254245 Desulfovibrio salexigens DSM 2638 8091284 YP_002989842.1 CDS Desal_0236 NC_012881.1 254274 255407 D PFAM: extracellular ligand-binding receptor; KEGG: sme:SMc01946 leucine-specific binding protein precursor; extracellular ligand-binding receptor 254274..255407 Desulfovibrio salexigens DSM 2638 8091285 YP_002989843.1 CDS Desal_0237 NC_012881.1 255473 256375 D PFAM: inner-membrane translocator; KEGG: maq:Maqu_3336 inner-membrane translocator; inner-membrane translocator 255473..256375 Desulfovibrio salexigens DSM 2638 8090739 YP_002989844.1 CDS Desal_0238 NC_012881.1 256356 257573 D PFAM: inner-membrane translocator; KEGG: sat:SYN_00787 branched-chain amino acid ABC transporter permease; inner-membrane translocator 256356..257573 Desulfovibrio salexigens DSM 2638 8091290 YP_002989845.1 CDS Desal_0239 NC_012881.1 257577 258290 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvm:DvMF_2611 ABC transporter; ABC transporter 257577..258290 Desulfovibrio salexigens DSM 2638 8091291 YP_002989846.1 CDS Desal_0240 NC_012881.1 258464 259210 D PFAM: extracellular solute-binding protein family 3; KEGG: hch:HCH_00708 amino acid ABC transporter periplasmic protein; family 3 extracellular solute-binding protein 258464..259210 Desulfovibrio salexigens DSM 2638 8091292 YP_002989847.1 CDS Desal_0241 NC_012881.1 259323 259514 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_0286 ferredoxin II; 4Fe-4S ferredoxin 259323..259514 Desulfovibrio salexigens DSM 2638 8091293 YP_002989848.1 CDS Desal_0242 NC_012881.1 259822 261030 D KEGG: dvm:DvMF_0505 hypothetical protein; hypothetical protein 259822..261030 Desulfovibrio salexigens DSM 2638 8091294 YP_002989849.1 CDS Desal_0243 NC_012881.1 261044 261208 D KEGG: dvm:DvMF_3081 hypothetical protein; hypothetical protein 261044..261208 Desulfovibrio salexigens DSM 2638 8091295 YP_002989850.1 CDS Desal_0244 NC_012881.1 261233 261670 D TIGRFAM: flagellar export protein FliJ; KEGG: dvm:DvMF_1393 flagellar export protein FliJ; flagellar export protein FliJ 261233..261670 Desulfovibrio salexigens DSM 2638 8091296 YP_002989851.1 CDS Desal_0245 NC_012881.1 261714 262274 D KEGG: dvm:DvMF_1394 hypothetical protein; hypothetical protein 261714..262274 Desulfovibrio salexigens DSM 2638 8091297 YP_002989852.1 CDS truA NC_012881.1 262285 263100 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 262285..263100 Desulfovibrio salexigens DSM 2638 8091298 YP_002989853.1 CDS Desal_0247 NC_012881.1 263036 264895 D hypothetical protein 263036..264895 Desulfovibrio salexigens DSM 2638 8091299 YP_002989854.1 CDS Desal_0248 NC_012881.1 264896 266857 R PFAM: protein of unknown function DUF342; KEGG: dde:Dde_1534 polymerase; hypothetical protein complement(264896..266857) Desulfovibrio salexigens DSM 2638 8091300 YP_002989855.1 CDS Desal_0249 NC_012881.1 266989 268233 R KEGG: dvl:Dvul_2239 hypothetical protein; hypothetical protein complement(266989..268233) Desulfovibrio salexigens DSM 2638 8091301 YP_002989856.1 CDS Desal_0250 NC_012881.1 268465 271119 D TIGRFAM: valyl-tRNA synthetase; KEGG: dde:Dde_2839 valyl-tRNA synthetase; valyl-tRNA synthetase 268465..271119 Desulfovibrio salexigens DSM 2638 8091302 YP_002989857.1 CDS Desal_0251 NC_012881.1 271274 272788 D TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen III synthase HEM4; KEGG: dde:Dde_2837 uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; uroporphyrin-III C-methyltransferase 271274..272788 Desulfovibrio salexigens DSM 2638 8091303 YP_002989858.1 CDS Desal_0252 NC_012881.1 273070 273744 D TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: dde:Dde_2835 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 273070..273744 Desulfovibrio salexigens DSM 2638 8091304 YP_002989859.1 CDS Desal_0253 NC_012881.1 273836 274744 R PFAM: aminoglycoside phosphotransferase; KEGG: dat:HRM2_21240 phosphotransferase family protein; aminoglycoside phosphotransferase complement(273836..274744) Desulfovibrio salexigens DSM 2638 8091305 YP_002989860.1 CDS Desal_0254 NC_012881.1 275016 275570 R PFAM: AMMECR1 domain protein; KEGG: dvm:DvMF_2774 AMMECR1 domain protein; AMMECR1 domain-containing protein complement(275016..275570) Desulfovibrio salexigens DSM 2638 8091306 YP_002989861.1 CDS Desal_0255 NC_012881.1 275596 275841 R PFAM: cysteine-rich small domain; KEGG: rpa:RPA0994 hypothetical protein; hypothetical protein complement(275596..275841) Desulfovibrio salexigens DSM 2638 8091307 YP_002989862.1 CDS Desal_0256 NC_012881.1 275851 277989 R PFAM: Stage II sporulation E family protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein; KEGG: dal:Dalk_1872 protein serine/threonine phosphatase; protein serine/threonine phosphatase complement(275851..277989) Desulfovibrio salexigens DSM 2638 8091308 YP_002989863.1 CDS Desal_0257 NC_012881.1 277996 278301 R KEGG: sfu:Sfum_2170 glucose-1-phosphate thymidylyltransferase, long form; glucose-1-phosphate thymidylyltransferase complement(277996..278301) Desulfovibrio salexigens DSM 2638 8091309 YP_002989864.1 CDS Desal_0258 NC_012881.1 278556 278816 D hypothetical protein 278556..278816 Desulfovibrio salexigens DSM 2638 8091310 YP_002989865.1 CDS Desal_0259 NC_012881.1 278926 279843 D PFAM: MscS Mechanosensitive ion channel; KEGG: rpe:RPE_4584 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 278926..279843 Desulfovibrio salexigens DSM 2638 8091311 YP_002989866.1 CDS Desal_0260 NC_012881.1 279836 280537 D KEGG: dvl:Dvul_2561 hypothetical protein; hypothetical protein 279836..280537 Desulfovibrio salexigens DSM 2638 8091312 YP_002989867.1 CDS Desal_0261 NC_012881.1 280534 281322 R KEGG: dps:DP0230 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(280534..281322) Desulfovibrio salexigens DSM 2638 8091313 YP_002989868.1 CDS Desal_0262 NC_012881.1 281440 281835 R PFAM: protein of unknown function UPF0047; KEGG: dde:Dde_3175 hypothetical protein; hypothetical protein complement(281440..281835) Desulfovibrio salexigens DSM 2638 8091314 YP_002989869.1 CDS Desal_0263 NC_012881.1 281835 283502 R KEGG: dde:Dde_0886 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(281835..283502) Desulfovibrio salexigens DSM 2638 8091315 YP_002989870.1 CDS Desal_0264 NC_012881.1 283578 284339 R KEGG: dvm:DvMF_1177 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase complement(283578..284339) Desulfovibrio salexigens DSM 2638 8091316 YP_002989871.1 CDS Desal_0265 NC_012881.1 284340 285575 R KEGG: dde:Dde_0803 precorrin-6Y C5,15-methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE complement(284340..285575) Desulfovibrio salexigens DSM 2638 8091317 YP_002989872.1 CDS Desal_0266 NC_012881.1 285707 285979 D hypothetical protein 285707..285979 Desulfovibrio salexigens DSM 2638 8091318 YP_002989873.1 CDS Desal_0267 NC_012881.1 285955 287067 R TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: dvu:DVU2750 cobalamin biosynthesis protein CbiD; cobalamin biosynthesis protein CbiD complement(285955..287067) Desulfovibrio salexigens DSM 2638 8091319 YP_002989874.1 CDS Desal_0268 NC_012881.1 287060 288229 R PFAM: UMUC domain protein DNA-repair protein; KEGG: dde:Dde_3621 DNA-directed DNA polymerase; DNA-directed DNA polymerase complement(287060..288229) Desulfovibrio salexigens DSM 2638 8091320 YP_002989875.1 CDS Desal_0269 NC_012881.1 288263 289639 R TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: dal:Dalk_0444 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(288263..289639) Desulfovibrio salexigens DSM 2638 8091321 YP_002989876.1 CDS Desal_0270 NC_012881.1 289667 290410 R PFAM: TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dvl:Dvul_2082 TPR repeat-containing protein; hypothetical protein complement(289667..290410) Desulfovibrio salexigens DSM 2638 8091322 YP_002989877.1 CDS Desal_0271 NC_012881.1 290494 291234 R TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvl:Dvul_0569 tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase, TrmH family, group 1 complement(290494..291234) Desulfovibrio salexigens DSM 2638 8091323 YP_002989878.1 CDS Desal_0272 NC_012881.1 291345 291566 D hypothetical protein 291345..291566 Desulfovibrio salexigens DSM 2638 8091324 YP_002989879.1 CDS Desal_0273 NC_012881.1 291677 291853 R hypothetical protein complement(291677..291853) Desulfovibrio salexigens DSM 2638 8091325 YP_002989880.1 CDS Desal_0274 NC_012881.1 291930 292073 R hypothetical protein complement(291930..292073) Desulfovibrio salexigens DSM 2638 8091326 YP_002989881.1 CDS Desal_0275 NC_012881.1 292317 294470 R PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dvl:Dvul_0949 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(292317..294470) Desulfovibrio salexigens DSM 2638 8091327 YP_002989882.1 CDS Desal_0276 NC_012881.1 294687 295454 R KEGG: dde:Dde_0551 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(294687..295454) Desulfovibrio salexigens DSM 2638 8091328 YP_002989883.1 CDS Desal_0277 NC_012881.1 295465 296994 R TIGRFAM: methyltransferase FkbM family; KEGG: nmu:Nmul_A1173 methyltransferase FkbM; FkbM family methyltransferase complement(295465..296994) Desulfovibrio salexigens DSM 2638 8091329 YP_002989884.1 CDS Desal_0278 NC_012881.1 297339 298166 R KEGG: dvm:DvMF_2100 hypothetical protein; hypothetical protein complement(297339..298166) Desulfovibrio salexigens DSM 2638 8091330 YP_002989885.1 CDS Desal_0279 NC_012881.1 298258 299205 D KEGG: hypothetical protein LOC553381; hypothetical protein 298258..299205 Desulfovibrio salexigens DSM 2638 8091331 YP_002989886.1 CDS Desal_0280 NC_012881.1 299306 299599 R KEGG: dvm:DvMF_0606 hypothetical protein; hypothetical protein complement(299306..299599) Desulfovibrio salexigens DSM 2638 8091332 YP_002989887.1 CDS Desal_0281 NC_012881.1 299814 300299 D KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein 299814..300299 Desulfovibrio salexigens DSM 2638 8091333 YP_002989888.1 CDS Desal_0282 NC_012881.1 300490 301014 D KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein 300490..301014 Desulfovibrio salexigens DSM 2638 8091334 YP_002989889.1 CDS Desal_0283 NC_012881.1 301060 302229 R KEGG: pca:Pcar_2120 hypothetical protein; hypothetical protein complement(301060..302229) Desulfovibrio salexigens DSM 2638 8091335 YP_002989890.1 CDS Desal_0284 NC_012881.1 302728 303909 R PFAM: iron-containing alcohol dehydrogenase; KEGG: dde:Dde_3523 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase complement(302728..303909) Desulfovibrio salexigens DSM 2638 8091336 YP_002989891.1 CDS Desal_0285 NC_012881.1 304422 305009 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sfu:Sfum_2548 redoxin domain protein; alkyl hydroperoxide reductase complement(304422..305009) Desulfovibrio salexigens DSM 2638 8091337 YP_002989892.1 CDS Desal_0286 NC_012881.1 305021 305563 R KEGG: dvl:Dvul_0301 redoxin domain-containing protein; redoxin domain-containing protein complement(305021..305563) Desulfovibrio salexigens DSM 2638 8091338 YP_002989893.1 CDS Desal_0287 NC_012881.1 305733 307076 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; ATPase AAA; KEGG: dde:Dde_3536 two component Fis family transcriptional regulator; Fis family transcriptional regulator complement(305733..307076) Desulfovibrio salexigens DSM 2638 8091339 YP_002989894.1 CDS Desal_0288 NC_012881.1 307089 308270 R PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dde:Dde_3535 histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(307089..308270) Desulfovibrio salexigens DSM 2638 8091340 YP_002989895.1 CDS Desal_0289 NC_012881.1 308270 309412 R PFAM: iron-containing alcohol dehydrogenase; KEGG: dde:Dde_3534 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase complement(308270..309412) Desulfovibrio salexigens DSM 2638 8091341 YP_002989896.1 CDS Desal_0290 NC_012881.1 309513 310133 R PFAM: phosphoglycerate mutase; KEGG: dvl:Dvul_1583 phosphoglycerate mutase; phosphoglycerate mutase complement(309513..310133) Desulfovibrio salexigens DSM 2638 8091342 YP_002989897.1 CDS Desal_0291 NC_012881.1 310130 311266 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvm:DvMF_0634 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(310130..311266) Desulfovibrio salexigens DSM 2638 8091343 YP_002989898.1 CDS Desal_0292 NC_012881.1 311269 312306 R PFAM: protein of unknown function DUF182; KEGG: dps:DP0263 hypothetical protein; hypothetical protein complement(311269..312306) Desulfovibrio salexigens DSM 2638 8091344 YP_002989899.1 CDS Desal_0293 NC_012881.1 312303 313637 R KEGG: dps:DP0264 coenzyme F390 synthetase; coenzyme F390 synthetase complement(312303..313637) Desulfovibrio salexigens DSM 2638 8091345 YP_002989900.1 CDS Desal_0294 NC_012881.1 313630 314979 R PFAM: radical SAM domain protein; KEGG: dde:Dde_3544 elongator protein 3/MiaB/NifB; radical SAM domain protein complement(313630..314979) Desulfovibrio salexigens DSM 2638 8091346 YP_002989901.1 CDS Desal_0295 NC_012881.1 314969 315433 R KEGG: dde:Dde_3543 hypothetical protein; hypothetical protein complement(314969..315433) Desulfovibrio salexigens DSM 2638 8091347 YP_002989902.1 CDS Desal_0296 NC_012881.1 315490 316140 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: dvu:DVU1556 hypothetical protein; methyltransferase type 11 complement(315490..316140) Desulfovibrio salexigens DSM 2638 8091348 YP_002989903.1 CDS Desal_0297 NC_012881.1 316140 316355 R KEGG: dde:Dde_3541 hypothetical protein; hypothetical protein complement(316140..316355) Desulfovibrio salexigens DSM 2638 8091349 YP_002989904.1 CDS Desal_0298 NC_012881.1 316432 318696 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dps:DP0269 Fe-S oxidoreductase; 4Fe-4S ferredoxin complement(316432..318696) Desulfovibrio salexigens DSM 2638 8091350 YP_002989905.1 CDS Desal_0299 NC_012881.1 318798 321521 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dps:DP0270 aldehyde oxidoreductase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(318798..321521) Desulfovibrio salexigens DSM 2638 8091351 YP_002989906.1 CDS Desal_0300 NC_012881.1 321588 322607 R PFAM: molybdopterin binding domain; KEGG: dps:DP0271 molybdopterin biosynthesis protein; molybdopterin binding domain-containing protein complement(321588..322607) Desulfovibrio salexigens DSM 2638 8091352 YP_002989907.1 CDS Desal_0301 NC_012881.1 323259 323990 R KEGG: dps:DP0463 hypothetical protein; hypothetical protein complement(323259..323990) Desulfovibrio salexigens DSM 2638 8091353 YP_002989908.1 CDS Desal_0302 NC_012881.1 324003 324677 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dps:DP0464 molybdenum ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(324003..324677) Desulfovibrio salexigens DSM 2638 8091354 YP_002989909.1 CDS Desal_0303 NC_012881.1 324682 325407 R TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; KEGG: dps:DP0465 molybdenum ABC transporter periplasmic substrate-binding protein; molybdenum ABC transporter substrate-binding protein complement(324682..325407) Desulfovibrio salexigens DSM 2638 8091355 YP_002989910.1 CDS Desal_0304 NC_012881.1 325407 326111 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dps:DP0466 molybdenum ABC-transporter ATP-binding protein; ABC transporter complement(325407..326111) Desulfovibrio salexigens DSM 2638 8090977 YP_002989911.1 CDS Desal_0305 NC_012881.1 326108 326773 R TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_3519 molybdate ABC transporter permease; molybdate ABC transporter inner membrane subunit complement(326108..326773) Desulfovibrio salexigens DSM 2638 8090978 YP_002989912.1 CDS Desal_0306 NC_012881.1 326773 327519 R TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dde:Dde_3518 molybdenum ABC transporter periplasmic molybdate-binding protein; molybdenum ABC transporter substrate-binding protein complement(326773..327519) Desulfovibrio salexigens DSM 2638 8094083 YP_002989913.1 CDS Desal_0307 NC_012881.1 327557 328735 D PFAM: TOBE domain protein; integrase family protein; KEGG: dde:Dde_3517 molybdenum-pterin binding domain-containing protein; TOBE domain-containing protein 327557..328735 Desulfovibrio salexigens DSM 2638 8094084 YP_002989914.1 CDS Desal_0308 NC_012881.1 328775 329278 R KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein complement(328775..329278) Desulfovibrio salexigens DSM 2638 8094085 YP_002989915.1 CDS Desal_0309 NC_012881.1 329494 330636 D KEGG: hch:HCH_00210 ABC-type sugar transport system, periplasmic component; sugar ABC transporter substrate-binding protein 329494..330636 Desulfovibrio salexigens DSM 2638 8094086 YP_002989916.1 CDS Desal_0310 NC_012881.1 330729 331244 D PFAM: redoxin; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dvl:Dvul_1832 redoxin domain-containing protein; redoxin 330729..331244 Desulfovibrio salexigens DSM 2638 8094087 YP_002989917.1 CDS Desal_0311 NC_012881.1 331307 332611 R KEGG: hypothetical protein; hypothetical protein complement(331307..332611) Desulfovibrio salexigens DSM 2638 8094088 YP_002989918.1 CDS Desal_0312 NC_012881.1 332623 333420 R hypothetical protein complement(332623..333420) Desulfovibrio salexigens DSM 2638 8094089 YP_002989919.1 CDS Desal_0313 NC_012881.1 334250 334501 D KEGG: dde:Dde_3444 hypothetical protein; hypothetical protein 334250..334501 Desulfovibrio salexigens DSM 2638 8094091 YP_002989920.1 CDS Desal_0314 NC_012881.1 334488 335480 D KEGG: dvl:Dvul_2955 hypothetical protein; hypothetical protein 334488..335480 Desulfovibrio salexigens DSM 2638 8094092 YP_002989921.1 CDS Desal_0315 NC_012881.1 335467 335613 D hypothetical protein 335467..335613 Desulfovibrio salexigens DSM 2638 8094093 YP_002989922.1 CDS Desal_0316 NC_012881.1 335830 337008 D KEGG: hypothetical protein; hypothetical protein 335830..337008 Desulfovibrio salexigens DSM 2638 8094094 YP_002989923.1 CDS Desal_0317 NC_012881.1 337010 338029 D PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: avi:Avi_9816 type IV secretion protein AvhB6; TrbL/VirB6 plasmid conjugal transfer protein 337010..338029 Desulfovibrio salexigens DSM 2638 8094095 YP_002989924.1 CDS Desal_0318 NC_012881.1 338703 339071 D PFAM: CopG domain protein DNA-binding domain protein; CopG family transcriptional regulator 338703..339071 Desulfovibrio salexigens DSM 2638 8094096 YP_002989925.1 CDS Desal_0319 NC_012881.1 339088 339279 D hypothetical protein 339088..339279 Desulfovibrio salexigens DSM 2638 8094097 YP_002989926.1 CDS Desal_0320 NC_012881.1 339379 339939 D PFAM: membrane-bound metal-dependent hydrolase; KEGG: lip:LI0734 hypothetical protein; membrane-bound metal-dependent hydrolase 339379..339939 Desulfovibrio salexigens DSM 2638 8094098 YP_002989927.1 CDS Desal_0321 NC_012881.1 340158 340706 D hypothetical protein 340158..340706 Desulfovibrio salexigens DSM 2638 8094099 YP_002989928.1 CDS Desal_0322 NC_012881.1 340945 342333 R KEGG: ankyrin repeat protein; ankyrin complement(340945..342333) Desulfovibrio salexigens DSM 2638 8094100 YP_002989929.1 CDS Desal_0323 NC_012881.1 342409 344298 R KEGG: pla:Plav_2049 hypothetical protein; hypothetical protein complement(342409..344298) Desulfovibrio salexigens DSM 2638 8094101 YP_002989930.1 CDS Desal_0324 NC_012881.1 344288 344791 R KEGG: smd:Smed_1227 hypothetical protein; hypothetical protein complement(344288..344791) Desulfovibrio salexigens DSM 2638 8094102 YP_002989931.1 CDS Desal_0325 NC_012881.1 344775 345344 R KEGG: smd:Smed_1228 hypothetical protein; hypothetical protein complement(344775..345344) Desulfovibrio salexigens DSM 2638 8094103 YP_002989932.1 CDS Desal_0326 NC_012881.1 345337 345540 R hypothetical protein complement(345337..345540) Desulfovibrio salexigens DSM 2638 8094104 YP_002989933.1 CDS Desal_0327 NC_012881.1 345632 346840 R PFAM: integrase family protein; KEGG: vha:VIBHAR_00841 integrase; integrase family protein complement(345632..346840) Desulfovibrio salexigens DSM 2638 8094105 YP_002989934.1 CDS Desal_0328 NC_012881.1 348033 349223 D PFAM: major facilitator superfamily MFS_1; KEGG: glo:Glov_0879 major facilitator superfamily MFS_1; major facilitator superfamily protein 348033..349223 Desulfovibrio salexigens DSM 2638 8094106 YP_002989935.1 CDS Desal_0329 NC_012881.1 349498 350838 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 349498..350838 Desulfovibrio salexigens DSM 2638 8094107 YP_002989936.1 CDS Desal_0330 NC_012881.1 350844 352043 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 350844..352043 Desulfovibrio salexigens DSM 2638 8094108 YP_002989937.1 CDS Desal_0331 NC_012881.1 352036 352815 D TIGRFAM: NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding domain protein; KEGG: mmw:Mmwyl1_1713 NADH:ubiquinone oxidoreductase, subunit C; NADH:ubiquinone oxidoreductase subunit C 352036..352815 Desulfovibrio salexigens DSM 2638 8094109 YP_002989938.1 CDS Desal_0332 NC_012881.1 352808 353425 D TIGRFAM: NADH:ubiquinone oxidoreductase, subunit D; PFAM: RnfA-Nqr electron transport subunit; KEGG: vpa:VP2348 Na(+)-translocating NADH-quinone reductase subunit D; NADH:ubiquinone oxidoreductase subunit D 352808..353425 Desulfovibrio salexigens DSM 2638 8094110 YP_002989939.1 CDS Desal_0333 NC_012881.1 353440 354048 D TIGRFAM: NADH:ubiquinone oxidoreductase, subunit E; PFAM: RnfA-Nqr electron transport subunit; KEGG: psa:PST_2651 Na(+)-translocating NADH-quinone reductase subunit E; NADH:ubiquinone oxidoreductase subunit E 353440..354048 Desulfovibrio salexigens DSM 2638 8094111 YP_002989940.1 CDS Desal_0334 NC_012881.1 354109 355335 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 354109..355335 Desulfovibrio salexigens DSM 2638 8094112 YP_002989941.1 CDS Desal_0335 NC_012881.1 355429 356475 D PFAM: ApbE family lipoprotein; KEGG: csa:Csal_1575 ApbE-like lipoprotein; ApbE family lipoprotein 355429..356475 Desulfovibrio salexigens DSM 2638 8094113 YP_002989942.1 CDS Desal_0336 NC_012881.1 356487 356690 D KEGG: vfm:VFMJ11_1528 periplasmic protein; hypothetical protein 356487..356690 Desulfovibrio salexigens DSM 2638 8094114 YP_002989943.1 CDS Desal_0337 NC_012881.1 356711 357172 D KEGG: slo:Shew_0560 hypothetical protein; hypothetical protein 356711..357172 Desulfovibrio salexigens DSM 2638 8094115 YP_002989944.1 CDS Desal_0338 NC_012881.1 357275 360271 R KEGG: sfu:Sfum_3176 hypothetical protein; hypothetical protein complement(357275..360271) Desulfovibrio salexigens DSM 2638 8094116 YP_002989945.1 CDS Desal_0339 NC_012881.1 360332 361273 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dps:DP0335 glcerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(360332..361273) Desulfovibrio salexigens DSM 2638 8094117 YP_002989946.1 CDS Desal_0340 NC_012881.1 361500 362780 R TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: asu:Asuc_0156 TRAP dicarboxylate transporter DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(361500..362780) Desulfovibrio salexigens DSM 2638 8094118 YP_002989947.1 CDS Desal_0341 NC_012881.1 362784 363281 R PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sit:TM1040_3196 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ component complement(362784..363281) Desulfovibrio salexigens DSM 2638 8094119 YP_002989948.1 CDS Desal_0342 NC_012881.1 363341 364342 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: spe:Spro_4705 TRAP dicarboxylate transporter DctP subunit; TRAP dicarboxylate transporter- DctP subunit complement(363341..364342) Desulfovibrio salexigens DSM 2638 8094120 YP_002989949.1 CDS Desal_0343 NC_012881.1 364409 365446 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bph:Bphy_7452 LacI family transcription regulator; LacI family transcriptional regulator complement(364409..365446) Desulfovibrio salexigens DSM 2638 8094121 YP_002989950.1 CDS Desal_0344 NC_012881.1 365654 366943 D KEGG: mxa:MXAN_5359 metallo-beta-lactamase family protein; hypothetical protein 365654..366943 Desulfovibrio salexigens DSM 2638 8094122 YP_002989951.1 CDS Desal_0345 NC_012881.1 367013 369298 R KEGG: dvm:DvMF_2548 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase complement(367013..369298) Desulfovibrio salexigens DSM 2638 8094123 YP_002989952.1 CDS Desal_0346 NC_012881.1 369353 371290 R KEGG: dvl:Dvul_2720 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; multi-sensor signal transduction histidine kinase complement(369353..371290) Desulfovibrio salexigens DSM 2638 8094124 YP_002989953.1 CDS Desal_0347 NC_012881.1 371385 371738 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dol:Dole_2257 response regulator receiver protein; response regulator receiver protein complement(371385..371738) Desulfovibrio salexigens DSM 2638 8094125 YP_002989954.1 CDS Desal_0348 NC_012881.1 371976 372689 R KEGG: dvl:Dvul_1202 hypothetical protein; hypothetical protein complement(371976..372689) Desulfovibrio salexigens DSM 2638 8094126 YP_002989955.1 CDS Desal_0349 NC_012881.1 372708 373943 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvm:DvMF_0624 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(372708..373943) Desulfovibrio salexigens DSM 2638 8094127 YP_002989956.1 CDS Desal_0350 NC_012881.1 374038 375660 R PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; rhodanese domain protein; SMART: rhodanese domain protein; KEGG: dde:Dde_0374 rhodanese-like protein; pyridine nucleotide-disulfide oxidoreductase dimerisation subunit complement(374038..375660) Desulfovibrio salexigens DSM 2638 8094128 YP_002989957.1 CDS Desal_0351 NC_012881.1 376443 376868 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dde:Dde_3112 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator complement(376443..376868) Desulfovibrio salexigens DSM 2638 8094129 YP_002989958.1 CDS Desal_0352 NC_012881.1 377115 377642 R TIGRFAM: TonB family protein; KEGG: dvl:Dvul_0505 TonB family protein; TonB family protein complement(377115..377642) Desulfovibrio salexigens DSM 2638 8091455 YP_002989959.1 CDS Desal_0353 NC_012881.1 377639 378073 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dvl:Dvul_0506 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(377639..378073) Desulfovibrio salexigens DSM 2638 8091516 YP_002989960.1 CDS Desal_0354 NC_012881.1 378086 378676 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: dvu:DVU2806 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel complement(378086..378676) Desulfovibrio salexigens DSM 2638 8091517 YP_002989961.1 CDS Desal_0355 NC_012881.1 378673 380499 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: dvl:Dvul_0508 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K complement(378673..380499) Desulfovibrio salexigens DSM 2638 8091518 YP_002989962.1 CDS Desal_0356 NC_012881.1 380571 381740 R KEGG: dvl:Dvul_0509 metallo-beta-lactamase family protein; metallo-beta-lactamase family protein complement(380571..381740) Desulfovibrio salexigens DSM 2638 8091519 YP_002989963.1 CDS Desal_0357 NC_012881.1 381765 383168 R KEGG: dde:Dde_1615 hypothetical protein; hypothetical protein complement(381765..383168) Desulfovibrio salexigens DSM 2638 8091520 YP_002989964.1 CDS Desal_0358 NC_012881.1 383256 383450 R KEGG: dvl:Dvul_0511 hypothetical protein; hypothetical protein complement(383256..383450) Desulfovibrio salexigens DSM 2638 8091521 YP_002989965.1 CDS Desal_0359 NC_012881.1 383470 384147 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: dvl:Dvul_0512 regulatory protein GntR, HTH; GntR family transcriptional regulator complement(383470..384147) Desulfovibrio salexigens DSM 2638 8091522 YP_002989966.1 CDS Desal_0360 NC_012881.1 384440 385717 R KEGG: dde:Dde_1612 hypothetical protein; hypothetical protein complement(384440..385717) Desulfovibrio salexigens DSM 2638 8091523 YP_002989967.1 CDS Desal_0361 NC_012881.1 386028 388145 D TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: dps:DP0481 formate dehydrogenase, chain A; formate dehydrogenase subunit alpha 386028..388145 Desulfovibrio salexigens DSM 2638 8091524 YP_002989968.1 CDS Desal_0362 NC_012881.1 388130 388732 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_0474 electron transport protein; 4Fe-4S ferredoxin 388130..388732 Desulfovibrio salexigens DSM 2638 8091525 YP_002989969.1 CDS Desal_0363 NC_012881.1 388735 390120 D KEGG: dde:Dde_0475 ferredoxin hydrogenase; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase, Fe-only 388735..390120 Desulfovibrio salexigens DSM 2638 8091526 YP_002989970.1 CDS Desal_0364 NC_012881.1 390123 390635 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: spe:Spro_2425 electron transport protein HydN; 4Fe-4S ferredoxin 390123..390635 Desulfovibrio salexigens DSM 2638 8091527 YP_002989971.1 CDS Desal_0365 NC_012881.1 390744 391856 D KEGG: pfl:PFL_0687 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 390744..391856 Desulfovibrio salexigens DSM 2638 8091528 YP_002989972.1 CDS Desal_0366 NC_012881.1 391862 393313 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: dvm:DvMF_2679 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator 391862..393313 Desulfovibrio salexigens DSM 2638 8091529 YP_002989973.1 CDS thiH NC_012881.1 393348 394757 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 393348..394757 Desulfovibrio salexigens DSM 2638 8091530 YP_002989974.1 CDS Desal_0368 NC_012881.1 394794 395810 D catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 394794..395810 Desulfovibrio salexigens DSM 2638 8091531 YP_002989975.1 CDS Desal_0369 NC_012881.1 395843 396889 R PFAM: dihydrouridine synthase DuS; KEGG: dde:Dde_3089 dihydrouridine synthase family protein; dihydrouridine synthase DuS complement(395843..396889) Desulfovibrio salexigens DSM 2638 8091532 YP_002989976.1 CDS Desal_0370 NC_012881.1 397230 397553 D KEGG: dde:Dde_0683 cytochrome c family protein; cytochrome c family protein 397230..397553 Desulfovibrio salexigens DSM 2638 8091533 YP_002989977.1 CDS Desal_0371 NC_012881.1 397648 399846 D PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: dde:Dde_0682 hypothetical protein; molybdopterin oxidoreductase 397648..399846 Desulfovibrio salexigens DSM 2638 8091534 YP_002989978.1 CDS Desal_0372 NC_012881.1 399843 400598 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_0681 Fe-S-cluster-containing hydrogenase components 1-like; 4Fe-4S ferredoxin 399843..400598 Desulfovibrio salexigens DSM 2638 8091535 YP_002989979.1 CDS Desal_0373 NC_012881.1 400598 401317 D KEGG: dde:Dde_0680 formate dehydrogenase gamma subunit; formate dehydrogenase subunit gamma 400598..401317 Desulfovibrio salexigens DSM 2638 8091536 YP_002989980.1 CDS Desal_0374 NC_012881.1 401428 402540 D PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: dde:Dde_0679 rhodanese-like protein; rhodanese domain protein 401428..402540 Desulfovibrio salexigens DSM 2638 8091537 YP_002989981.1 CDS Desal_0375 NC_012881.1 402595 402966 D KEGG: dde:Dde_0678 rhodanese-like protein; rhodanese-like protein 402595..402966 Desulfovibrio salexigens DSM 2638 8091538 YP_002989982.1 CDS Desal_0376 NC_012881.1 403051 403587 D hypothetical protein 403051..403587 Desulfovibrio salexigens DSM 2638 8091539 YP_002989983.1 CDS Desal_0377 NC_012881.1 403574 404224 R PFAM: cytoplasmic chaperone TorD family protein; KEGG: dde:Dde_0677 hypothetical protein; cytoplasmic chaperone TorD family protein complement(403574..404224) Desulfovibrio salexigens DSM 2638 8091540 YP_002989984.1 CDS Desal_0378 NC_012881.1 404276 404563 D PFAM: protein of unknown function DUF156; KEGG: dde:Dde_0676 hypothetical protein; hypothetical protein 404276..404563 Desulfovibrio salexigens DSM 2638 8091541 YP_002989985.1 CDS Desal_0379 NC_012881.1 404572 404832 D KEGG: dat:HRM2_35060 hypothetical protein; hypothetical protein 404572..404832 Desulfovibrio salexigens DSM 2638 8091542 YP_002989986.1 CDS Desal_0380 NC_012881.1 404904 406523 D PFAM: formylmethanofuran dehydrogenase subunit E region; molybdopterin binding domain; KEGG: dde:Dde_0685 tungsten formylmethanofuran dehydrogenase family protein/molybdopterin binding protein; formylmethanofuran dehydrogenase subunit E 404904..406523 Desulfovibrio salexigens DSM 2638 8091543 YP_002989987.1 CDS nhaB NC_012881.1 406617 408239 R involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter complement(406617..408239) Desulfovibrio salexigens DSM 2638 8091544 YP_002989988.1 CDS Desal_0382 NC_012881.1 408417 410216 R PFAM: citrate transporter; TrkA-C domain protein; KEGG: dal:Dalk_1272 TrkA-C domain protein; citrate transporter complement(408417..410216) Desulfovibrio salexigens DSM 2638 8091545 YP_002989989.1 CDS Desal_0383 NC_012881.1 410258 410869 R hypothetical protein complement(410258..410869) Desulfovibrio salexigens DSM 2638 8091546 YP_002989990.1 CDS Desal_0384 NC_012881.1 411372 413420 D PFAM: peptidase S16 lon domain protein; response regulator receiver; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: dvm:DvMF_2107 response regulator receiver protein; ATPase AAA 411372..413420 Desulfovibrio salexigens DSM 2638 8091547 YP_002989991.1 CDS Desal_0385 NC_012881.1 413417 414760 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: dvl:Dvul_0090 two component, sigma54 specific, Fis family transcriptional regulator; Fis family transcriptional regulator complement(413417..414760) Desulfovibrio salexigens DSM 2638 8091548 YP_002989992.1 CDS Desal_0386 NC_012881.1 414757 416172 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: dvl:Dvul_0091 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(414757..416172) Desulfovibrio salexigens DSM 2638 8091549 YP_002989993.1 CDS Desal_0387 NC_012881.1 416406 416795 D PFAM: thioesterase superfamily protein; KEGG: pca:Pcar_1879 hypothetical protein; thioesterase superfamily protein 416406..416795 Desulfovibrio salexigens DSM 2638 8091550 YP_002989994.1 CDS Desal_0388 NC_012881.1 416893 418839 R KEGG: hypothetical protein; hypothetical protein complement(416893..418839) Desulfovibrio salexigens DSM 2638 8091551 YP_002989995.1 CDS Desal_0389 NC_012881.1 419065 419463 D hypothetical protein 419065..419463 Desulfovibrio salexigens DSM 2638 8091552 YP_002989996.1 CDS Desal_0390 NC_012881.1 419478 419966 D TIGRFAM: general secretion pathway protein H; KEGG: noc:Noc_2892 general secretion pathway protein H; general secretion pathway protein H 419478..419966 Desulfovibrio salexigens DSM 2638 8091553 YP_002989997.1 CDS Desal_0391 NC_012881.1 419956 420372 D KEGG: pfs:PFLU2418 type II secretion system, exported protein I; hypothetical protein 419956..420372 Desulfovibrio salexigens DSM 2638 8091554 YP_002989998.1 CDS Desal_0392 NC_012881.1 420369 420851 D PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: bra:BRADO2400 serine protease DO-like precursor; PDZ/DHR/GLGF domain-containing protein 420369..420851 Desulfovibrio salexigens DSM 2638 8091555 YP_002989999.1 CDS Desal_0393 NC_012881.1 420851 421276 D TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: gur:Gura_0680 general secretion pathway protein G; general secretion pathway protein G 420851..421276 Desulfovibrio salexigens DSM 2638 8091556 YP_002990000.1 CDS Desal_0394 NC_012881.1 421248 421859 D KEGG: net:Neut_1835 prepilin-type cleavage/methylation-like; hypothetical protein 421248..421859 Desulfovibrio salexigens DSM 2638 8091557 YP_002990001.1 CDS Desal_0395 NC_012881.1 421864 422883 D KEGG: sat:SYN_01554 general secretory pathway protein K; hypothetical protein 421864..422883 Desulfovibrio salexigens DSM 2638 8091558 YP_002990002.1 CDS Desal_0396 NC_012881.1 422897 424243 D PFAM: fimbrial assembly family protein; fimbrial assembly family protein 422897..424243 Desulfovibrio salexigens DSM 2638 8091559 YP_002990003.1 CDS Desal_0397 NC_012881.1 424240 425787 D KEGG: pfo:Pfl01_4931 sulfonate/nitrate transport system substrate-binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 424240..425787 Desulfovibrio salexigens DSM 2638 8091560 YP_002990004.1 CDS Desal_0398 NC_012881.1 425791 426669 D KEGG: aav:Aave_3965 protease Do; hypothetical protein 425791..426669 Desulfovibrio salexigens DSM 2638 8091561 YP_002990005.1 CDS Desal_0399 NC_012881.1 426723 428327 D PFAM: type II and III secretion system protein; NolW domain protein; KEGG: sat:SYN_01548 general secretion pathway protein D; type II and III secretion system protein 426723..428327 Desulfovibrio salexigens DSM 2638 8091562 YP_002990006.1 CDS Desal_0400 NC_012881.1 428342 429934 D PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: ATPase AAA; KEGG: gur:Gura_0682 general secretory pathway protein E; type II secretion system protein E 428342..429934 Desulfovibrio salexigens DSM 2638 8091563 YP_002990007.1 CDS Desal_0401 NC_012881.1 429950 431176 D PFAM: type II secretion system protein; KEGG: gme:Gmet_1395 type II secretion system protein; type II secretion system protein 429950..431176 Desulfovibrio salexigens DSM 2638 8091564 YP_002990008.1 CDS Desal_0402 NC_012881.1 431234 432058 D PFAM: DSBA oxidoreductase; KEGG: dvl:Dvul_2927 DsbA oxidoreductase; DSBA oxidoreductase 431234..432058 Desulfovibrio salexigens DSM 2638 8091565 YP_002990009.1 CDS Desal_0403 NC_012881.1 432098 434248 R KEGG: dvm:DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(432098..434248) Desulfovibrio salexigens DSM 2638 8091566 YP_002990010.1 CDS Desal_0404 NC_012881.1 434480 435286 R KEGG: dat:HRM2_02360 hypothetical protein; hypothetical protein complement(434480..435286) Desulfovibrio salexigens DSM 2638 8091567 YP_002990011.1 CDS Desal_0405 NC_012881.1 435442 436680 D PFAM: glycosyl transferase group 1; KEGG: dat:HRM2_02350 glycogen synthase (starch [bacterial glycogen] synthase); group 1 glycosyl transferase 435442..436680 Desulfovibrio salexigens DSM 2638 8091568 YP_002990012.1 CDS Desal_0406 NC_012881.1 436681 437553 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: dde:Dde_1205 hypothetical protein; hypothetical protein complement(436681..437553) Desulfovibrio salexigens DSM 2638 8091569 YP_002990013.1 CDS Desal_0407 NC_012881.1 437663 439045 R PFAM: sodium/sulfate symporter; citrate transporter; KEGG: dde:Dde_1204 di- and tricarboxylate transporters-like; sodium/sulfate symporter complement(437663..439045) Desulfovibrio salexigens DSM 2638 8091570 YP_002990014.1 CDS Desal_0408 NC_012881.1 439054 439971 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: dde:Dde_1203 thioredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(439054..439971) Desulfovibrio salexigens DSM 2638 8091571 YP_002990015.1 CDS Desal_0409 NC_012881.1 439999 440307 R PFAM: Thioredoxin domain; KEGG: dde:Dde_1202 thioredoxin; thioredoxin complement(439999..440307) Desulfovibrio salexigens DSM 2638 8091572 YP_002990016.1 CDS Desal_0410 NC_012881.1 440372 441895 R PFAM: sulfatase; KEGG: dde:Dde_1201 sulfatase; sulfatase complement(440372..441895) Desulfovibrio salexigens DSM 2638 8091573 YP_002990017.1 CDS Desal_0411 NC_012881.1 442088 442795 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: dde:Dde_1200 CRP/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(442088..442795) Desulfovibrio salexigens DSM 2638 8091574 YP_002990018.1 CDS Desal_0412 NC_012881.1 442802 444205 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: dvl:Dvul_2039 two component, sigma54 specific, Fis family transcriptional regulator; Fis family transcriptional regulator complement(442802..444205) Desulfovibrio salexigens DSM 2638 8091575 YP_002990019.1 CDS Desal_0413 NC_012881.1 444205 446640 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dde:Dde_0878 periplasmic sensor signal transduction histidine kinase; histidine kinase complement(444205..446640) Desulfovibrio salexigens DSM 2638 8091576 YP_002990020.1 CDS Desal_0414 NC_012881.1 446781 447125 D hypothetical protein 446781..447125 Desulfovibrio salexigens DSM 2638 8091577 YP_002990021.1 CDS Desal_0415 NC_012881.1 447142 447399 R KEGG: dvm:DvMF_1362 hypothetical protein; hypothetical protein complement(447142..447399) Desulfovibrio salexigens DSM 2638 8091578 YP_002990022.1 CDS Desal_0416 NC_012881.1 447471 449222 R PFAM: hypothetical protein; KEGG: dde:Dde_0876 hypothetical protein; hypothetical protein complement(447471..449222) Desulfovibrio salexigens DSM 2638 8091579 YP_002990023.1 CDS Desal_0417 NC_012881.1 449554 451098 D TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: gsu:GSU3167 hypothetical protein; type VI secretion-associated protein 449554..451098 Desulfovibrio salexigens DSM 2638 8091580 YP_002990024.1 CDS Desal_0418 NC_012881.1 451144 451626 D TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: hypothetical protein; KEGG: bpt:Bpet2446 hypothetical protein; type VI secretion protein 451144..451626 Desulfovibrio salexigens DSM 2638 8091581 YP_002990025.1 CDS Desal_0419 NC_012881.1 451639 453120 D TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: gme:Gmet_0279 hypothetical protein; type VI secretion protein EvpB 451639..453120 Desulfovibrio salexigens DSM 2638 8091582 YP_002990026.1 CDS Desal_0420 NC_012881.1 453206 453688 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: gme:Gmet_0280 hypothetical protein; type VI secretion system effector 453206..453688 Desulfovibrio salexigens DSM 2638 8091583 YP_002990027.1 CDS Desal_0421 NC_012881.1 453740 454159 D TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: gme:Gmet_3312 hypothetical protein; type VI secretion system lysozyme-like protein 453740..454159 Desulfovibrio salexigens DSM 2638 8091584 YP_002990028.1 CDS Desal_0422 NC_012881.1 454194 455924 D TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: gsu:GSU0431 hypothetical protein; type VI secretion protein 454194..455924 Desulfovibrio salexigens DSM 2638 8091585 YP_002990029.1 CDS Desal_0423 NC_012881.1 455888 456928 D TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: gme:Gmet_3314 hypothetical protein; type VI secretion protein 455888..456928 Desulfovibrio salexigens DSM 2638 8091586 YP_002990030.1 CDS Desal_0424 NC_012881.1 456925 459570 D KEGG: gme:Gmet_3315 ATPase AAA; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; ATPase AAA 456925..459570 Desulfovibrio salexigens DSM 2638 8091587 YP_002990031.1 CDS Desal_0425 NC_012881.1 459592 461901 D TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: pin:Ping_0023 rhs element Vgr protein; Rhs element Vgr protein 459592..461901 Desulfovibrio salexigens DSM 2638 8091588 YP_002990032.1 CDS Desal_0426 NC_012881.1 461914 465747 D PFAM: pentapeptide repeat protein; KEGG: scl:sce8474 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein 461914..465747 Desulfovibrio salexigens DSM 2638 8091589 YP_002990033.1 CDS Desal_0427 NC_012881.1 465744 466805 D PFAM: pentapeptide repeat protein; KEGG: scl:sce6786 hypothetical protein; pentapeptide repeat-containing protein 465744..466805 Desulfovibrio salexigens DSM 2638 8091590 YP_002990034.1 CDS Desal_0428 NC_012881.1 466958 467581 D KEGG: scl:sce6787 hypothetical protein; hypothetical protein 466958..467581 Desulfovibrio salexigens DSM 2638 8091591 YP_002990035.1 CDS Desal_0429 NC_012881.1 467599 468003 D KEGG: scl:sce5662 hypothetical protein; hypothetical protein 467599..468003 Desulfovibrio salexigens DSM 2638 8091592 YP_002990036.1 CDS Desal_0430 NC_012881.1 468195 468968 D hypothetical protein 468195..468968 Desulfovibrio salexigens DSM 2638 8090980 YP_002990037.1 CDS Desal_0431 NC_012881.1 469087 470541 R PFAM: protein of unknown function DUF877; KEGG: bpr:GBP346_A3809 type VI secretion protein, EvpB/family; hypothetical protein complement(469087..470541) Desulfovibrio salexigens DSM 2638 8093091 YP_002990038.1 CDS Desal_0432 NC_012881.1 470739 471311 D TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: gme:Gmet_3310 lipoprotein; type VI secretion lipoprotein 470739..471311 Desulfovibrio salexigens DSM 2638 8093092 YP_002990039.1 CDS Desal_0433 NC_012881.1 471315 472694 D TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: gme:Gmet_3311 hypothetical protein; type VI secretion protein 471315..472694 Desulfovibrio salexigens DSM 2638 8093093 YP_002990040.1 CDS Desal_0434 NC_012881.1 472763 473488 D TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: gme:Gmet_0273 hypothetical protein; DotU family type IV / VI secretion system protein 472763..473488 Desulfovibrio salexigens DSM 2638 8093094 YP_002990041.1 CDS Desal_0435 NC_012881.1 473582 477085 D KEGG: gme:Gmet_0274 hypothetical protein; hypothetical protein 473582..477085 Desulfovibrio salexigens DSM 2638 8093095 YP_002990042.1 CDS Desal_0436 NC_012881.1 477096 477815 D hypothetical protein 477096..477815 Desulfovibrio salexigens DSM 2638 8093096 YP_002990043.1 CDS Desal_0437 NC_012881.1 478042 479313 R KEGG: dvm:DvMF_2622 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: radical SAM domain protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein; SMART: Elongator protein 3/MiaB/NifB; nitrogenase cofactor biosynthesis protein NifB complement(478042..479313) Desulfovibrio salexigens DSM 2638 8093097 YP_002990044.1 CDS Desal_0438 NC_012881.1 479349 480707 R PFAM: oxidoreductase/nitrogenase component 1; KEGG: dvm:DvMF_2621 nitrogenase; nitrogenase complement(479349..480707) Desulfovibrio salexigens DSM 2638 8093098 YP_002990045.1 CDS Desal_0439 NC_012881.1 480710 482074 R TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; KEGG: dvm:DvMF_2620 nitrogenase MoFe cofactor biosynthesis protein NifE; nitrogenase MoFe cofactor biosynthesis protein NifE complement(480710..482074) Desulfovibrio salexigens DSM 2638 8093099 YP_002990046.1 CDS Desal_0440 NC_012881.1 482089 482544 R PFAM: GCN5-related N-acetyltransferase; KEGG: dal:Dalk_1512 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(482089..482544) Desulfovibrio salexigens DSM 2638 8093100 YP_002990047.1 CDS Desal_0441 NC_012881.1 482609 482911 R KEGG: dvm:DvMF_2619 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S complement(482609..482911) Desulfovibrio salexigens DSM 2638 8093101 YP_002990048.1 CDS Desal_0442 NC_012881.1 482928 484058 R PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dvm:DvMF_2618 dinitrogenase iron-molybdenum cofactor biosynthesis protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(482928..484058) Desulfovibrio salexigens DSM 2638 8093102 YP_002990049.1 CDS Desal_0443 NC_012881.1 484184 485557 R KEGG: dvm:DvMF_2617 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta complement(484184..485557) Desulfovibrio salexigens DSM 2638 8093103 YP_002990050.1 CDS Desal_0444 NC_012881.1 485713 487347 R KEGG: dvm:DvMF_2616 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha complement(485713..487347) Desulfovibrio salexigens DSM 2638 8093104 YP_002990051.1 CDS Desal_0445 NC_012881.1 487366 487740 R PFAM: nitrogen regulatory protein P-II; KEGG: dvm:DvMF_2615 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(487366..487740) Desulfovibrio salexigens DSM 2638 8093105 YP_002990052.1 CDS Desal_0446 NC_012881.1 487742 488089 R PFAM: nitrogen regulatory protein P-II; KEGG: dvm:DvMF_2614 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(487742..488089) Desulfovibrio salexigens DSM 2638 8093106 YP_002990053.1 CDS nifH NC_012881.1 488297 489124 R nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; nitrogenase reductase complement(488297..489124) Desulfovibrio salexigens DSM 2638 8093107 YP_002990054.1 CDS Desal_0448 NC_012881.1 489450 490556 D PFAM: pyruvate carboxyltransferase; KEGG: dvm:DvMF_2612 pyruvate carboxyltransferase; pyruvate carboxyltransferase 489450..490556 Desulfovibrio salexigens DSM 2638 8093108 YP_002990055.1 CDS Desal_0449 NC_012881.1 490553 491419 D KEGG: dat:HRM2_48650 hypothetical protein; hypothetical protein 490553..491419 Desulfovibrio salexigens DSM 2638 8093109 YP_002990056.1 CDS Desal_0450 NC_012881.1 491661 492674 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dds:Ddes_0430 transcriptional regulator, AraC family; AraC family transcriptional regulator 491661..492674 Desulfovibrio salexigens DSM 2638 8093110 YP_002990057.1 CDS Desal_0451 NC_012881.1 492871 494994 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dde:Dde_1600 receptor precursor-mostly Fe transport; TonB-dependent receptor 492871..494994 Desulfovibrio salexigens DSM 2638 8093111 YP_002990058.1 CDS Desal_0452 NC_012881.1 495129 496394 D PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_5357 RhtX/FptX family siderophore transporter; major facilitator superfamily protein 495129..496394 Desulfovibrio salexigens DSM 2638 8093112 YP_002990059.1 CDS Desal_0453 NC_012881.1 496632 499316 D KEGG: ppd:Ppro_1940 RND efflux transporter; RND efflux transporter 496632..499316 Desulfovibrio salexigens DSM 2638 8093113 YP_002990060.1 CDS Desal_0454 NC_012881.1 499429 500250 D KEGG: ppd:Ppro_1941 hypothetical protein; hypothetical protein 499429..500250 Desulfovibrio salexigens DSM 2638 8093114 YP_002990061.1 CDS Desal_0455 NC_012881.1 500247 501551 D KEGG: ppd:Ppro_1942 hypothetical protein; hypothetical protein 500247..501551 Desulfovibrio salexigens DSM 2638 8093115 YP_002990062.1 CDS Desal_0456 NC_012881.1 501562 502080 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ppd:Ppro_1939 MarR family transcriptional regulator; MarR family transcriptional regulator 501562..502080 Desulfovibrio salexigens DSM 2638 8093116 YP_002990063.1 CDS Desal_0457 NC_012881.1 502152 506135 D TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: gur:Gura_1539 CoA-substrate-specific enzyme activase; CoA-substrate-specific enzyme activase 502152..506135 Desulfovibrio salexigens DSM 2638 8093117 YP_002990064.1 CDS Desal_0458 NC_012881.1 506155 506757 D PFAM: methyltransferase type 11; KEGG: ppd:Ppro_1944 methyltransferase type 11; methyltransferase type 11 506155..506757 Desulfovibrio salexigens DSM 2638 8093118 YP_002990065.1 CDS Desal_0459 NC_012881.1 506776 507336 D KEGG: ppd:Ppro_1943 hypothetical protein; hypothetical protein 506776..507336 Desulfovibrio salexigens DSM 2638 8093119 YP_002990066.1 CDS Desal_0460 NC_012881.1 507537 508022 D PFAM: ferric-uptake regulator; KEGG: dvm:DvMF_1364 ferric uptake regulator, Fur family; ferric uptake regulator, Fur family 507537..508022 Desulfovibrio salexigens DSM 2638 8093120 YP_002990067.1 CDS Desal_0461 NC_012881.1 508153 508374 D KEGG: dde:Dde_0499 hypothetical protein; hypothetical protein 508153..508374 Desulfovibrio salexigens DSM 2638 8093121 YP_002990068.1 CDS Desal_0462 NC_012881.1 508456 509211 R PFAM: protein of unknown function DUF362; KEGG: dal:Dalk_3398 protein of unknown function DUF362; hypothetical protein complement(508456..509211) Desulfovibrio salexigens DSM 2638 8093122 YP_002990069.1 CDS Desal_0463 NC_012881.1 509409 510260 R PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: dps:DP1820 multidrug ABC transporter; MerR family transcriptional regulator complement(509409..510260) Desulfovibrio salexigens DSM 2638 8093123 YP_002990070.1 CDS Desal_0464 NC_012881.1 510404 510667 R KEGG: dde:Dde_3289 hypothetical protein; hypothetical protein complement(510404..510667) Desulfovibrio salexigens DSM 2638 8093124 YP_002990071.1 CDS Desal_0465 NC_012881.1 510667 511752 R KEGG: dde:Dde_3288 hypothetical protein; hypothetical protein complement(510667..511752) Desulfovibrio salexigens DSM 2638 8093125 YP_002990072.1 CDS Desal_0466 NC_012881.1 512507 513121 D PFAM: microcompartments protein; KEGG: dde:Dde_3284 carbon dioxide concentrating mechanism protein (PduA related)-like; microcompartments protein 512507..513121 Desulfovibrio salexigens DSM 2638 8093126 YP_002990073.1 CDS Desal_0467 NC_012881.1 513184 514671 D KEGG: dde:Dde_3283 acetaldehyde dehydrogenase-like; acetaldehyde dehydrogenase-like protein 513184..514671 Desulfovibrio salexigens DSM 2638 8093127 YP_002990074.1 CDS Desal_0468 NC_012881.1 514702 517248 D PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; KEGG: dde:Dde_3282 formate C-acetyltransferase; formate C-acetyltransferase 514702..517248 Desulfovibrio salexigens DSM 2638 8093128 YP_002990075.1 CDS Desal_0469 NC_012881.1 517316 518245 D KEGG: dde:Dde_3281 radical-activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; glycyl-radical enzyme activating protein family 517316..518245 Desulfovibrio salexigens DSM 2638 8093129 YP_002990076.1 CDS Desal_0470 NC_012881.1 518276 518941 D PFAM: microcompartments protein; KEGG: dde:Dde_3280 carbon dioxide concentrating mechanism/carboxysome shell protein-like; microcompartments protein 518276..518941 Desulfovibrio salexigens DSM 2638 8093130 YP_002990077.1 CDS Desal_0471 NC_012881.1 518946 520391 D TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: dde:Dde_3279 aldehyde dehydrogenase; acetaldehyde dehydrogenase 518946..520391 Desulfovibrio salexigens DSM 2638 8093131 YP_002990078.1 CDS Desal_0472 NC_012881.1 520495 520779 D PFAM: microcompartments protein; KEGG: dde:Dde_3278 microcompartment protein; microcompartments protein 520495..520779 Desulfovibrio salexigens DSM 2638 8093132 YP_002990079.1 CDS Desal_0473 NC_012881.1 520932 521603 D PFAM: Propanediol utilization protein; KEGG: dde:Dde_3276 propanediol utilization protein-like; propanediol utilization protein 520932..521603 Desulfovibrio salexigens DSM 2638 8093133 YP_002990080.1 CDS Desal_0474 NC_012881.1 521747 522562 D TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: dde:Dde_3275 ethanolamine utilization protein EutJ; ethanolamine utilization protein EutJ 521747..522562 Desulfovibrio salexigens DSM 2638 8093134 YP_002990081.1 CDS Desal_0475 NC_012881.1 522645 523244 D KEGG: dde:Dde_3274 hypothetical protein; hypothetical protein 522645..523244 Desulfovibrio salexigens DSM 2638 8093135 YP_002990082.1 CDS Desal_0476 NC_012881.1 523255 523524 D PFAM: ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dds:Ddes_1365 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 523255..523524 Desulfovibrio salexigens DSM 2638 8093136 YP_002990083.1 CDS Desal_0477 NC_012881.1 523530 524078 D PFAM: microcompartments protein; KEGG: dde:Dde_3272 propanediol utilization protein (PduT)-like; microcompartments protein 523530..524078 Desulfovibrio salexigens DSM 2638 8093137 YP_002990084.1 CDS Desal_0478 NC_012881.1 524081 524425 D KEGG: dde:Dde_3271 hypothetical protein; hypothetical protein 524081..524425 Desulfovibrio salexigens DSM 2638 8093138 YP_002990085.1 CDS Desal_0479 NC_012881.1 524453 524740 D PFAM: microcompartments protein; KEGG: dde:Dde_3278 microcompartment protein; microcompartments protein 524453..524740 Desulfovibrio salexigens DSM 2638 8093139 YP_002990086.1 CDS Desal_0480 NC_012881.1 524847 525956 D PFAM: iron-containing alcohol dehydrogenase; KEGG: dde:Dde_3267 alcetaldehyde dehydrogenase or NADPH-dependent butanol dehydrogenase; iron-containing alcohol dehydrogenase 524847..525956 Desulfovibrio salexigens DSM 2638 8093140 YP_002990087.1 CDS Desal_0481 NC_012881.1 526035 527360 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: dde:Dde_3266 electron transfer protein (PduS); respiratory-chain NADH dehydrogenase domain 51 kDa subunit 526035..527360 Desulfovibrio salexigens DSM 2638 8093141 YP_002990088.1 CDS Desal_0482 NC_012881.1 527418 527969 D PFAM: microcompartments protein; KEGG: dde:Dde_3265 propanediol utilization protein PduT; microcompartments protein 527418..527969 Desulfovibrio salexigens DSM 2638 8093142 YP_002990089.1 CDS Desal_0483 NC_012881.1 528056 528409 D PFAM: microcompartments protein; KEGG: dps:DP1827 propanediol utilization protein (PduU); microcompartments protein 528056..528409 Desulfovibrio salexigens DSM 2638 8093143 YP_002990090.1 CDS Desal_0484 NC_012881.1 528524 528952 D TIGRFAM: ethanolamine utilization protein, EutP; KEGG: dde:Dde_3263 ethanolamine utilization protein-like; ethanolamine utilization protein, EutP 528524..528952 Desulfovibrio salexigens DSM 2638 8093144 YP_002990091.1 CDS Desal_0485 NC_012881.1 528939 529691 R PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: dvm:DvMF_0527 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase complement(528939..529691) Desulfovibrio salexigens DSM 2638 8093145 YP_002990092.1 CDS Desal_0486 NC_012881.1 529898 530707 R PFAM: ExsB family protein; PP-loop domain protein; KEGG: sat:SYN_00475 GMP synthase (glutamine-hydrolyzing); ExsB family protein complement(529898..530707) Desulfovibrio salexigens DSM 2638 8093146 YP_002990093.1 CDS Desal_0487 NC_012881.1 530781 532034 R PFAM: protein of unknown function DUF111; KEGG: dvm:DvMF_0528 protein of unknown function DUF111; hypothetical protein complement(530781..532034) Desulfovibrio salexigens DSM 2638 8093147 YP_002990094.1 CDS Desal_0488 NC_012881.1 532105 533304 R PFAM: aldo/keto reductase; KEGG: dat:HRM2_04090 aldo/keto reductase; aldo/keto reductase complement(532105..533304) Desulfovibrio salexigens DSM 2638 8093148 YP_002990095.1 CDS Desal_0489 NC_012881.1 533497 534711 D PFAM: patatin; KEGG: cti:RALTA_B0685 lipid acyl hydrolase, patatin-like domain; patatin 533497..534711 Desulfovibrio salexigens DSM 2638 8093149 YP_002990096.1 CDS Desal_0490 NC_012881.1 534811 535719 D KEGG: lip:LI0272 hypothetical protein; hypothetical protein 534811..535719 Desulfovibrio salexigens DSM 2638 8093150 YP_002990097.1 CDS Desal_0491 NC_012881.1 535819 536463 R KEGG: mmw:Mmwyl1_0155 hexapaptide repeat-containing transferase; hexapaptide repeat-containing transferase complement(535819..536463) Desulfovibrio salexigens DSM 2638 8093151 YP_002990098.1 CDS Desal_0492 NC_012881.1 536494 537207 R PFAM: protein of unknown function DUF554; KEGG: apl:APL_0733 hypothetical protein; hypothetical protein complement(536494..537207) Desulfovibrio salexigens DSM 2638 8093152 YP_002990099.1 CDS Desal_0493 NC_012881.1 537302 537613 R KEGG: pfs:PFLU1909 hypothetical protein; hypothetical protein complement(537302..537613) Desulfovibrio salexigens DSM 2638 8093153 YP_002990100.1 CDS Desal_0494 NC_012881.1 537707 538405 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: bmc:BAbS19_II08700 bacterial regulatory protein, Crp family; Crp/Fnr family transcriptional regulator complement(537707..538405) Desulfovibrio salexigens DSM 2638 8093154 YP_002990101.1 CDS Desal_0495 NC_012881.1 538650 539312 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: dvl:Dvul_2834 HAD family hydrolase; HAD-superfamily hydrolase 538650..539312 Desulfovibrio salexigens DSM 2638 8093155 YP_002990102.1 CDS Desal_0496 NC_012881.1 539474 540700 D PFAM: Metal-dependent hydrolase HDOD; KEGG: dde:Dde_0643 metal dependent phosphohydrolase; signal transduction protein 539474..540700 Desulfovibrio salexigens DSM 2638 8093156 YP_002990103.1 CDS Desal_0497 NC_012881.1 540702 542342 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: glo:Glov_0136 multi-sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 540702..542342 Desulfovibrio salexigens DSM 2638 8093157 YP_002990104.1 CDS Desal_0498 NC_012881.1 542434 542832 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvl:Dvul_0539 response regulator receiver protein; response regulator receiver protein 542434..542832 Desulfovibrio salexigens DSM 2638 8093158 YP_002990105.1 CDS Desal_0499 NC_012881.1 542900 543571 R PFAM: protein of unknown function DUF1498; KEGG: dde:Dde_2521 hypothetical protein; hypothetical protein complement(542900..543571) Desulfovibrio salexigens DSM 2638 8093159 YP_002990106.1 CDS Desal_0500 NC_012881.1 543594 544478 R PFAM: PfkB domain protein; KEGG: dde:Dde_2522 fructokinase; PfkB domain-containing protein complement(543594..544478) Desulfovibrio salexigens DSM 2638 8093160 YP_002990107.1 CDS Desal_0501 NC_012881.1 544482 545321 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_3659 sugar ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(544482..545321) Desulfovibrio salexigens DSM 2638 8093161 YP_002990108.1 CDS Desal_0502 NC_012881.1 545325 546443 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_3658 glucose ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(545325..546443) Desulfovibrio salexigens DSM 2638 8093162 YP_002990109.1 CDS Desal_0503 NC_012881.1 546512 547774 R PFAM: extracellular solute-binding protein family 1; KEGG: dde:Dde_3657 sugar ABC transporter substrate-binding protein; extracellular solute-binding protein complement(546512..547774) Desulfovibrio salexigens DSM 2638 8093163 YP_002990110.1 CDS Desal_0504 NC_012881.1 547914 549011 R PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: dde:Dde_3656 ATPase; ABC transporter complement(547914..549011) Desulfovibrio salexigens DSM 2638 8093164 YP_002990111.1 CDS Desal_0505 NC_012881.1 549043 550062 R PFAM: aldose 1-epimerase; KEGG: cja:CJA_0807 aldose 1-epimerase; aldose 1-epimerase complement(549043..550062) Desulfovibrio salexigens DSM 2638 8093165 YP_002990112.1 CDS Desal_0506 NC_012881.1 550062 551084 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator complement(550062..551084) Desulfovibrio salexigens DSM 2638 8093166 YP_002990113.1 CDS Desal_0507 NC_012881.1 551086 552414 R PFAM: GHMP kinase; KEGG: dde:Dde_3653 galactokinase; galactokinase complement(551086..552414) Desulfovibrio salexigens DSM 2638 8093167 YP_002990114.1 CDS Desal_0508 NC_012881.1 552416 553465 R catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase complement(552416..553465) Desulfovibrio salexigens DSM 2638 8093168 YP_002990115.1 CDS Desal_0509 NC_012881.1 554085 554672 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 4 type 2; KEGG: dvm:DvMF_1623 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 554085..554672 Desulfovibrio salexigens DSM 2638 8093169 YP_002990116.1 CDS Desal_0510 NC_012881.1 554768 555082 D KEGG: dvm:DvMF_1616 hypothetical protein; transmembrane anti-sigma factor 554768..555082 Desulfovibrio salexigens DSM 2638 8093170 YP_002990117.1 CDS Desal_0511 NC_012881.1 555276 555938 D PFAM: flagellar hook capping protein; KEGG: dvl:Dvul_1635 flagellar hook capping protein; flagellar hook capping protein 555276..555938 Desulfovibrio salexigens DSM 2638 8093333 YP_002990118.1 CDS Desal_0512 NC_012881.1 555962 557551 D PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body FlaE domain protein; KEGG: dvm:DvMF_0246 protein of unknown function DUF1078 domain protein; hypothetical protein 555962..557551 Desulfovibrio salexigens DSM 2638 8092815 YP_002990119.1 CDS Desal_0513 NC_012881.1 557728 559812 D TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: dvm:DvMF_1619 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 557728..559812 Desulfovibrio salexigens DSM 2638 8092816 YP_002990120.1 CDS Desal_0514 NC_012881.1 559822 561312 D TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: dde:Dde_3151 flagellar hook-associated protein FlgL; flagellar hook-associated protein 3 559822..561312 Desulfovibrio salexigens DSM 2638 8092817 YP_002990121.1 CDS Desal_0515 NC_012881.1 561324 563066 D PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: dvm:DvMF_1621 flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain-containing protein 561324..563066 Desulfovibrio salexigens DSM 2638 8092818 YP_002990122.1 CDS Desal_0516 NC_012881.1 563163 564863 D KEGG: dde:Dde_0136 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; adenine deaminase 563163..564863 Desulfovibrio salexigens DSM 2638 8092819 YP_002990123.1 CDS Desal_0517 NC_012881.1 564860 566803 R KEGG: dat:HRM2_38620 Aor7; PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase complement(564860..566803) Desulfovibrio salexigens DSM 2638 8092820 YP_002990124.1 CDS Desal_0518 NC_012881.1 567014 568606 D KEGG: dvu:DVUA0143 Nif-specific regulatory protein; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: GAF domain protein; ATPase AAA; Fis family transcriptional regulator 567014..568606 Desulfovibrio salexigens DSM 2638 8092821 YP_002990125.1 CDS Desal_0519 NC_012881.1 568733 569593 R hypothetical protein complement(568733..569593) Desulfovibrio salexigens DSM 2638 8092822 YP_002990126.1 CDS Desal_0520 NC_012881.1 569672 571489 R KEGG: rso:RSc0102 calcium binding hemolysin protein; hypothetical protein complement(569672..571489) Desulfovibrio salexigens DSM 2638 8092823 YP_002990127.1 CDS Desal_0521 NC_012881.1 571750 572910 R KEGG: pca:Pcar_2648 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; 4-coumarate--CoA ligase complement(571750..572910) Desulfovibrio salexigens DSM 2638 8092824 YP_002990128.1 CDS Desal_0522 NC_012881.1 572913 573797 R KEGG: pca:Pcar_2649 beta-ketoacyl synthase domain-containing protein; hypothetical protein complement(572913..573797) Desulfovibrio salexigens DSM 2638 8092825 YP_002990129.1 CDS Desal_0523 NC_012881.1 573794 574984 R PFAM: beta-ketoacyl synthase; KEGG: pca:Pcar_2650 3-oxoacyl-(acyl-carrier-protein) synthase; beta-ketoacyl synthase complement(573794..574984) Desulfovibrio salexigens DSM 2638 8092826 YP_002990130.1 CDS Desal_0524 NC_012881.1 574988 575266 R KEGG: pca:Pcar_2651 acyl-carrier protein; acyl-carrier protein complement(574988..575266) Desulfovibrio salexigens DSM 2638 8092827 YP_002990131.1 CDS Desal_0525 NC_012881.1 575257 576195 R KEGG: pca:Pcar_2652 acyltransferase; acyltransferase complement(575257..576195) Desulfovibrio salexigens DSM 2638 8092828 YP_002990132.1 CDS Desal_0526 NC_012881.1 576211 577365 R PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_2653 glycosyltransferase; family 2 glycosyl transferase complement(576211..577365) Desulfovibrio salexigens DSM 2638 8092829 YP_002990133.1 CDS Desal_0527 NC_012881.1 577355 578749 R PFAM: radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ppd:Ppro_0920 radical SAM domain-containing protein; radical SAM domain protein complement(577355..578749) Desulfovibrio salexigens DSM 2638 8092830 YP_002990134.1 CDS Desal_0528 NC_012881.1 578757 579236 R PFAM: thioesterase superfamily protein; KEGG: pca:Pcar_2654 thioesterase; thioesterase superfamily protein complement(578757..579236) Desulfovibrio salexigens DSM 2638 8092831 YP_002990135.1 CDS Desal_0529 NC_012881.1 579236 579622 R PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: pca:Pcar_2655 hypothetical protein; 3-hydroxyacyl-ACP dehydratase complement(579236..579622) Desulfovibrio salexigens DSM 2638 8092832 YP_002990136.1 CDS Desal_0530 NC_012881.1 579627 580148 R hypothetical protein complement(579627..580148) Desulfovibrio salexigens DSM 2638 8092833 YP_002990137.1 CDS Desal_0531 NC_012881.1 580141 582531 R KEGG: pca:Pcar_2657 exporter; exporter complement(580141..582531) Desulfovibrio salexigens DSM 2638 8092834 YP_002990138.1 CDS Desal_0532 NC_012881.1 582534 583166 R PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: pca:Pcar_2658 hypothetical protein; outer membrane lipoprotein carrier protein LolA complement(582534..583166) Desulfovibrio salexigens DSM 2638 8092835 YP_002990139.1 CDS Desal_0533 NC_012881.1 583154 583648 R KEGG: pca:Pcar_2659 3-hydroxylacyl-(acyl carrier protein) dehydratase; 3-hydroxylacyl-(acyl carrier protein) dehydratase complement(583154..583648) Desulfovibrio salexigens DSM 2638 8092836 YP_002990140.1 CDS Desal_0534 NC_012881.1 583663 584694 R PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_2660 Fe-S oxidoreductase, coenzyme synthesis protein; radical SAM domain protein complement(583663..584694) Desulfovibrio salexigens DSM 2638 8092837 YP_002990141.1 CDS Desal_0535 NC_012881.1 584711 585109 R KEGG: efe:EFER_3449 lipoprotein; lipoprotein complement(584711..585109) Desulfovibrio salexigens DSM 2638 8092838 YP_002990142.1 CDS Desal_0536 NC_012881.1 585154 585906 R PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: pca:Pcar_2662 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase complement(585154..585906) Desulfovibrio salexigens DSM 2638 8092839 YP_002990143.1 CDS Desal_0537 NC_012881.1 585941 586195 R PFAM: phosphopantetheine-binding; KEGG: pca:Pcar_2663 acyl carrier protein; phosphopantetheine-binding protein complement(585941..586195) Desulfovibrio salexigens DSM 2638 8092840 YP_002990144.1 CDS Desal_0538 NC_012881.1 586195 587421 R PFAM: beta-ketoacyl synthase; KEGG: pca:Pcar_2664 3-oxoacyl-(acyl-carrier-protein) synthase; beta-ketoacyl synthase complement(586195..587421) Desulfovibrio salexigens DSM 2638 8092841 YP_002990145.1 CDS Desal_0539 NC_012881.1 587403 588899 R PFAM: FAD dependent oxidoreductase; KEGG: pca:Pcar_2665 phytoene dehydrogenase; all-trans-retinol 13,14-reductase complement(587403..588899) Desulfovibrio salexigens DSM 2638 8092842 YP_002990146.1 CDS Desal_0540 NC_012881.1 588899 590113 R PFAM: beta-ketoacyl synthase; KEGG: pca:Pcar_2666 3-oxoacyl-(acyl-carrier-protein) synthase I; beta-ketoacyl synthase complement(588899..590113) Desulfovibrio salexigens DSM 2638 8092843 YP_002990147.1 CDS Desal_0541 NC_012881.1 590253 590975 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pca:Pcar_2667 3-oxoacyl-(acyl-carrier protein) reductase; short-chain dehydrogenase/reductase SDR complement(590253..590975) Desulfovibrio salexigens DSM 2638 8092844 YP_002990148.1 CDS Desal_0542 NC_012881.1 591049 591222 R hypothetical protein complement(591049..591222) Desulfovibrio salexigens DSM 2638 8092845 YP_002990149.1 CDS Desal_0543 NC_012881.1 591290 592777 R KEGG: msl:Msil_2699 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; PAS/PAC and GAF sensor-containing diguanylate cyclase complement(591290..592777) Desulfovibrio salexigens DSM 2638 8092846 YP_002990150.1 CDS Desal_0544 NC_012881.1 592811 594769 R KEGG: dvl:Dvul_1570 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(592811..594769) Desulfovibrio salexigens DSM 2638 8092847 YP_002990151.1 CDS Desal_0545 NC_012881.1 594989 596146 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dal:Dalk_2344 efflux transporter RND family, MFP subunit; RND family efflux transporter MFP subunit 594989..596146 Desulfovibrio salexigens DSM 2638 8092848 YP_002990152.1 CDS Desal_0546 NC_012881.1 596146 599385 D PFAM: acriflavin resistance protein; KEGG: dal:Dalk_2343 acriflavin resistance protein; acriflavin resistance protein 596146..599385 Desulfovibrio salexigens DSM 2638 8092849 YP_002990153.1 CDS Desal_0547 NC_012881.1 599493 599855 D PFAM: cupin; KEGG: asu:Asuc_2103 cupin 2 domain-containing protein; cupin 599493..599855 Desulfovibrio salexigens DSM 2638 8092850 YP_002990154.1 CDS Desal_0548 NC_012881.1 599898 601298 R KEGG: dde:Dde_1071 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(599898..601298) Desulfovibrio salexigens DSM 2638 8092851 YP_002990155.1 CDS Desal_0549 NC_012881.1 601451 602443 R PFAM: aldo/keto reductase; KEGG: bid:Bind_1198 aldo/keto reductase; aldo/keto reductase complement(601451..602443) Desulfovibrio salexigens DSM 2638 8092852 YP_002990156.1 CDS Desal_0550 NC_012881.1 602552 603457 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dvl:Dvul_0075 LysR family transcriptional regulator; LysR family transcriptional regulator 602552..603457 Desulfovibrio salexigens DSM 2638 8092853 YP_002990157.1 CDS Desal_0551 NC_012881.1 603541 603795 D hypothetical protein 603541..603795 Desulfovibrio salexigens DSM 2638 8092854 YP_002990158.1 CDS Desal_0552 NC_012881.1 603792 603947 D hypothetical protein 603792..603947 Desulfovibrio salexigens DSM 2638 8092855 YP_002990159.1 CDS Desal_0553 NC_012881.1 604020 604862 R PFAM: dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: hch:HCH_00259 dTDP-4-dehydrorhamnose reductase-like protein; dTDP-4-dehydrorhamnose reductase complement(604020..604862) Desulfovibrio salexigens DSM 2638 8092856 YP_002990160.1 CDS Desal_0554 NC_012881.1 604875 605942 R PFAM: radical SAM domain protein; KEGG: geo:Geob_0664 radical SAM domain protein; radical SAM domain protein complement(604875..605942) Desulfovibrio salexigens DSM 2638 8092857 YP_002990161.1 CDS Desal_0555 NC_012881.1 605955 606614 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bja:bll7982 hypothetical protein; methyltransferase type 11 complement(605955..606614) Desulfovibrio salexigens DSM 2638 8092858 YP_002990162.1 CDS Desal_0556 NC_012881.1 606626 607231 R hypothetical protein complement(606626..607231) Desulfovibrio salexigens DSM 2638 8092859 YP_002990163.1 CDS Desal_0557 NC_012881.1 607240 607851 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: geo:Geob_0661 methyltransferase type 12; methyltransferase type 11 complement(607240..607851) Desulfovibrio salexigens DSM 2638 8092860 YP_002990164.1 CDS Desal_0558 NC_012881.1 607947 608867 R PFAM: transketolase; transketolase; KEGG: bja:blr5427 transketolase family protein; transketolase complement(607947..608867) Desulfovibrio salexigens DSM 2638 8092861 YP_002990165.1 CDS Desal_0559 NC_012881.1 608860 609666 R PFAM: transketolase; KEGG: bja:blr5426 transketolase; transketolase complement(608860..609666) Desulfovibrio salexigens DSM 2638 8092862 YP_002990166.1 CDS Desal_0560 NC_012881.1 609683 610714 R PFAM: aminoglycoside phosphotransferase; KEGG: bja:blr5425 hypothetical protein; aminoglycoside phosphotransferase complement(609683..610714) Desulfovibrio salexigens DSM 2638 8092863 YP_002990167.1 CDS Desal_0561 NC_012881.1 610718 611326 R KEGG: bja:blr5424 hypothetical protein; hypothetical protein complement(610718..611326) Desulfovibrio salexigens DSM 2638 8092864 YP_002990168.1 CDS Desal_0562 NC_012881.1 611372 612442 R PFAM: radical SAM domain protein; KEGG: tdn:Suden_0182 radical SAM family protein; radical SAM domain protein complement(611372..612442) Desulfovibrio salexigens DSM 2638 8092865 YP_002990169.1 CDS Desal_0564 NC_012881.1 613034 613984 R KEGG: gsu:GSU2086 hypothetical protein; hypothetical protein complement(613034..613984) Desulfovibrio salexigens DSM 2638 8092867 YP_002990170.1 CDS Desal_0565 NC_012881.1 613986 615515 R TIGRFAM: cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: bja:blr5422 hypothetical protein; cytidyltransferase complement(613986..615515) Desulfovibrio salexigens DSM 2638 8092868 YP_002990171.1 CDS Desal_0566 NC_012881.1 615516 616397 R PFAM: N-acetylneuraminic acid synthase domain; KEGG: pca:Pcar_1140 polysaccharide biosynthesis protein, sialic acid synthase; N-acetylneuraminic acid synthase domain-containing protein complement(615516..616397) Desulfovibrio salexigens DSM 2638 8092869 YP_002990172.1 CDS Desal_0567 NC_012881.1 616636 618066 D KEGG: pca:Pcar_1794 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; cupin; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 616636..618066 Desulfovibrio salexigens DSM 2638 8092870 YP_002990173.1 CDS Desal_0568 NC_012881.1 618111 619907 R PFAM: glycosyl transferase family 2; KEGG: mxa:MXAN_4616 glycosyl transferase family protein; family 2 glycosyl transferase complement(618111..619907) Desulfovibrio salexigens DSM 2638 8092871 YP_002990174.1 CDS Desal_0569 NC_012881.1 620085 621101 R KEGG: hypothetical protein ; K01186 neuraminidase; hypothetical protein complement(620085..621101) Desulfovibrio salexigens DSM 2638 8092872 YP_002990175.1 CDS Desal_0570 NC_012881.1 621103 623043 R PFAM: glycoside hydrolase family 57; KEGG: gme:Gmet_0448 glycoside hydrolase family protein; glycoside hydrolase family protein complement(621103..623043) Desulfovibrio salexigens DSM 2638 8092873 YP_002990176.1 CDS Desal_0571 NC_012881.1 623049 624278 R PFAM: phosphoribosylglycinamide synthetase; KEGG: pca:Pcar_1119 biotin carboxylase; phosphoribosylglycinamide synthetase complement(623049..624278) Desulfovibrio salexigens DSM 2638 8092874 YP_002990177.1 CDS Desal_0572 NC_012881.1 624284 625489 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: shl:Shal_1399 methyltransferase type 11; methyltransferase type 11 complement(624284..625489) Desulfovibrio salexigens DSM 2638 8092875 YP_002990178.1 CDS Desal_0573 NC_012881.1 625489 627033 R KEGG: glo:Glov_3381 hypothetical protein; hypothetical protein complement(625489..627033) Desulfovibrio salexigens DSM 2638 8092876 YP_002990179.1 CDS Desal_0574 NC_012881.1 627041 627970 R PFAM: transketolase; transketolase; KEGG: gsu:GSU2918 transketolase, C-terminal subunit; transketolase complement(627041..627970) Desulfovibrio salexigens DSM 2638 8092877 YP_002990180.1 CDS Desal_0575 NC_012881.1 627970 628800 R PFAM: transketolase; KEGG: gur:Gura_0491 transketolase domain-containing protein; transketolase complement(627970..628800) Desulfovibrio salexigens DSM 2638 8092878 YP_002990181.1 CDS Desal_0576 NC_012881.1 628810 629559 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: shl:Shal_1401 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(628810..629559) Desulfovibrio salexigens DSM 2638 8092879 YP_002990182.1 CDS Desal_0577 NC_012881.1 629566 630480 R PFAM: methyltransferase type 11; Methionine biosynthesis MetW protein; methyltransferase type 12; KEGG: sbl:Sbal_2963 methyltransferase type 12; methyltransferase type 11 complement(629566..630480) Desulfovibrio salexigens DSM 2638 8092880 YP_002990183.1 CDS Desal_0578 NC_012881.1 630500 631501 R KEGG: gme:Gmet_0454 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase complement(630500..631501) Desulfovibrio salexigens DSM 2638 8092881 YP_002990184.1 CDS Desal_0579 NC_012881.1 631491 632177 R PFAM: acylneuraminate cytidylyltransferase; KEGG: dat:HRM2_36850 NeuA; acylneuraminate cytidylyltransferase complement(631491..632177) Desulfovibrio salexigens DSM 2638 8092882 YP_002990185.1 CDS Desal_0580 NC_012881.1 632192 632878 R KEGG: dvm:DvMF_1841 UDP-N-acetylglucosamine pyrophosphorylase related protein; UDP-N-acetylglucosamine pyrophosphorylase related protein complement(632192..632878) Desulfovibrio salexigens DSM 2638 8092883 YP_002990186.1 CDS Desal_0581 NC_012881.1 632898 634073 R PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: dde:Dde_0439 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase complement(632898..634073) Desulfovibrio salexigens DSM 2638 8092884 YP_002990187.1 CDS Desal_0582 NC_012881.1 634341 634772 D PFAM: transmembrane pair domain protein; KEGG: dps:DP0447 hypothetical protein; transmembrane pair domain-containing protein 634341..634772 Desulfovibrio salexigens DSM 2638 8092885 YP_002990188.1 CDS Desal_0583 NC_012881.1 634991 636118 R KEGG: dvm:DvMF_0651 hypothetical protein; hypothetical protein complement(634991..636118) Desulfovibrio salexigens DSM 2638 8092886 YP_002990189.1 CDS Desal_0584 NC_012881.1 636275 637198 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvl:Dvul_0416 hypothetical protein; hypothetical protein 636275..637198 Desulfovibrio salexigens DSM 2638 8092887 YP_002990190.1 CDS Desal_0585 NC_012881.1 637359 638459 R TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related; KEGG: dde:Dde_1698 GTP-dependent nucleic acid-binding protein EngD; GTP-binding protein YchF complement(637359..638459) Desulfovibrio salexigens DSM 2638 8092888 YP_002990191.1 CDS Desal_0586 NC_012881.1 638686 639495 R PFAM: glycosyl transferase family 2; KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein; family 2 glycosyl transferase complement(638686..639495) Desulfovibrio salexigens DSM 2638 8092889 YP_002990192.1 CDS Desal_0587 NC_012881.1 639517 640977 R KEGG: lch:Lcho_1007 hypothetical protein; hypothetical protein complement(639517..640977) Desulfovibrio salexigens DSM 2638 8092890 YP_002990193.1 CDS Desal_0588 NC_012881.1 641148 642947 R KEGG: acp:A2cp1_0644 FkbM family methyltransferase; hypothetical protein complement(641148..642947) Desulfovibrio salexigens DSM 2638 8092891 YP_002990194.1 CDS Desal_0589 NC_012881.1 643342 644403 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:RL0824 oxidoreductase; oxidoreductase domain-containing protein 643342..644403 Desulfovibrio salexigens DSM 2638 8092892 YP_002990195.1 CDS Desal_0590 NC_012881.1 644406 645224 D PFAM: formyl transferase domain protein; KEGG: lhk:LHK_02795 WbcV protein; formyl transferase domain-containing protein 644406..645224 Desulfovibrio salexigens DSM 2638 8092893 YP_002990196.1 CDS Desal_0591 NC_012881.1 645244 646356 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:RL0822 DegT family aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 645244..646356 Desulfovibrio salexigens DSM 2638 8091130 YP_002990197.1 CDS Desal_0592 NC_012881.1 646375 647727 R KEGG: noc:Noc_2433 hypothetical protein; hypothetical protein complement(646375..647727) Desulfovibrio salexigens DSM 2638 8092241 YP_002990198.1 CDS Desal_0593 NC_012881.1 647911 649092 D PFAM: HI0933 family protein; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: vvy:VV0077 flavoprotein; hypothetical protein 647911..649092 Desulfovibrio salexigens DSM 2638 8092242 YP_002990199.1 CDS Desal_0594 NC_012881.1 649107 649862 D KEGG: vsa:VSAL_I1192 acetyltransferase; hypothetical protein 649107..649862 Desulfovibrio salexigens DSM 2638 8092243 YP_002990200.1 CDS Desal_0595 NC_012881.1 649859 650230 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvm:DvMF_2324 PAS/PAC sensor hybrid histidine kinase; response regulator receiver protein complement(649859..650230) Desulfovibrio salexigens DSM 2638 8092244 YP_002990201.1 CDS Desal_0596 NC_012881.1 650350 651180 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase; KEGG: dde:Dde_3530 hydrogenase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(650350..651180) Desulfovibrio salexigens DSM 2638 8092245 YP_002990202.1 CDS Desal_0597 NC_012881.1 651173 652231 R KEGG: dde:Dde_1212 hydrogenase; hydrogenase complement(651173..652231) Desulfovibrio salexigens DSM 2638 8092246 YP_002990203.1 CDS Desal_0598 NC_012881.1 652234 653193 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: dvm:DvMF_0325 methyl-viologen-reducing hydrogenase delta subunit; 4Fe-4S ferredoxin complement(652234..653193) Desulfovibrio salexigens DSM 2638 8092247 YP_002990204.1 CDS Desal_0599 NC_012881.1 653224 653688 R PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: dds:Ddes_2101 methyl-viologen-reducing hydrogenase delta subunit; methyl-viologen-reducing hydrogenase delta subunit complement(653224..653688) Desulfovibrio salexigens DSM 2638 8092248 YP_002990205.1 CDS Desal_0600 NC_012881.1 653676 655634 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_3526 heterodisulfide reductase, A subunit; 4Fe-4S ferredoxin complement(653676..655634) Desulfovibrio salexigens DSM 2638 8092249 YP_002990206.1 CDS Desal_0601 NC_012881.1 655663 656553 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dde:Dde_1208 succinate dehydrogenase subunit C; CoB--CoM heterodisulfide reductase complement(655663..656553) Desulfovibrio salexigens DSM 2638 8092250 YP_002990207.1 CDS Desal_0602 NC_012881.1 656550 657110 R KEGG: dde:Dde_1207 heterodisulfide reductase, C subunit; heterodisulfide reductase subunit C complement(656550..657110) Desulfovibrio salexigens DSM 2638 8092251 YP_002990208.1 CDS Desal_0603 NC_012881.1 657717 658175 D KEGG: dvl:Dvul_2062 cytochrome c family protein; cytochrome c family protein 657717..658175 Desulfovibrio salexigens DSM 2638 8092252 YP_002990209.1 CDS Desal_0604 NC_012881.1 658186 660189 D KEGG: dvm:DvMF_2482 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 658186..660189 Desulfovibrio salexigens DSM 2638 8092253 YP_002990210.1 CDS Desal_0605 NC_012881.1 660325 662181 R PFAM: carbamoyltransferase; KEGG: dol:Dole_0978 carbamoyltransferase; carbamoyltransferase complement(660325..662181) Desulfovibrio salexigens DSM 2638 8092254 YP_002990211.1 CDS Desal_0606 NC_012881.1 662191 662340 R KEGG: dol:Dole_0977 hypothetical protein; hypothetical protein complement(662191..662340) Desulfovibrio salexigens DSM 2638 8092255 YP_002990212.1 CDS Desal_0607 NC_012881.1 662378 662770 R KEGG: dol:Dole_0976 membrane protein; membrane protein complement(662378..662770) Desulfovibrio salexigens DSM 2638 8092256 YP_002990213.1 CDS Desal_0608 NC_012881.1 662797 664002 R hypothetical protein complement(662797..664002) Desulfovibrio salexigens DSM 2638 8092257 YP_002990214.1 CDS Desal_0609 NC_012881.1 664323 665195 R KEGG: azo:azo1317 hypothetical protein; hypothetical protein complement(664323..665195) Desulfovibrio salexigens DSM 2638 8092258 YP_002990215.1 CDS Desal_0610 NC_012881.1 665591 666010 R KEGG: dde:Dde_1688 hypothetical protein; hypothetical protein complement(665591..666010) Desulfovibrio salexigens DSM 2638 8092259 YP_002990216.1 CDS Desal_0611 NC_012881.1 666081 667151 R PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_1689 OmpA family protein; OmpA/MotB domain-containing protein complement(666081..667151) Desulfovibrio salexigens DSM 2638 8092260 YP_002990217.1 CDS Desal_0612 NC_012881.1 667254 668585 R PFAM: protein of unknown function DUF1063; KEGG: dal:Dalk_4447 protein of unknown function DUF1063; hypothetical protein complement(667254..668585) Desulfovibrio salexigens DSM 2638 8092261 YP_002990218.1 CDS Desal_0613 NC_012881.1 669041 670018 D TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: dde:Dde_3466 ADP-glyceromanno-heptose 6-epimerase precursor; ADP-L-glycero-D-manno-heptose-6-epimerase 669041..670018 Desulfovibrio salexigens DSM 2638 8092262 YP_002990219.1 CDS Desal_0614 NC_012881.1 670129 672381 D PFAM: organic solvent tolerance protein; KEGG: dde:Dde_1413 organic solvent tolerance protein; organic solvent tolerance protein 670129..672381 Desulfovibrio salexigens DSM 2638 8092263 YP_002990220.1 CDS Desal_0615 NC_012881.1 672515 674413 D TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: dde:Dde_3464 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 672515..674413 Desulfovibrio salexigens DSM 2638 8092264 YP_002990221.1 CDS Desal_0616 NC_012881.1 674443 675567 D KEGG: dvm:DvMF_1349 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 674443..675567 Desulfovibrio salexigens DSM 2638 8092265 YP_002990222.1 CDS Desal_0617 NC_012881.1 675585 675773 D hypothetical protein 675585..675773 Desulfovibrio salexigens DSM 2638 8092266 YP_002990223.1 CDS Desal_0618 NC_012881.1 675846 676991 D PFAM: extracellular ligand-binding receptor; KEGG: sfu:Sfum_3105 extracellular ligand-binding receptor; extracellular ligand-binding receptor 675846..676991 Desulfovibrio salexigens DSM 2638 8092267 YP_002990224.1 CDS Desal_0619 NC_012881.1 676975 677565 R PFAM: NADPH-dependent FMN reductase; KEGG: dde:Dde_0441 iron-sulfur flavoprotein; NADPH-dependent FMN reductase complement(676975..677565) Desulfovibrio salexigens DSM 2638 8092268 YP_002990225.1 CDS Desal_0620 NC_012881.1 677740 679005 R PFAM: cobyrinic acid ac-diamide synthase; dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dde:Dde_3202 hypothetical protein; cobyrinic acid ac-diamide synthase complement(677740..679005) Desulfovibrio salexigens DSM 2638 8092269 YP_002990226.1 CDS Desal_0621 NC_012881.1 679196 679555 R PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dvl:Dvul_1123 dinitrogenase iron-molybdenum cofactor biosynthesis; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(679196..679555) Desulfovibrio salexigens DSM 2638 8092270 YP_002990227.1 CDS Desal_0622 NC_012881.1 679557 680027 R KEGG: dde:Dde_3197 hypothetical protein; hypothetical protein complement(679557..680027) Desulfovibrio salexigens DSM 2638 8092271 YP_002990228.1 CDS Desal_0623 NC_012881.1 680159 681493 R KEGG: dvu:DVU2106 sigma-54 dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; PAS fold-4 domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; PAS domain containing protein; Fis family transcriptional regulator complement(680159..681493) Desulfovibrio salexigens DSM 2638 8092272 YP_002990229.1 CDS Desal_0624 NC_012881.1 681602 682258 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: dvm:DvMF_3165 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB complement(681602..682258) Desulfovibrio salexigens DSM 2638 8092273 YP_002990230.1 CDS Desal_0625 NC_012881.1 682274 682624 R PFAM: hydrogenase expression/synthesis HypA; KEGG: dvm:DvMF_3166 hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA complement(682274..682624) Desulfovibrio salexigens DSM 2638 8092274 YP_002990231.1 CDS Desal_0626 NC_012881.1 682979 683638 D PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein; KEGG: dvm:DvMF_2848 CBS domain containing membrane protein; hypothetical protein 682979..683638 Desulfovibrio salexigens DSM 2638 8092275 YP_002990232.1 CDS Desal_0627 NC_012881.1 683800 684558 D PFAM: extracellular solute-binding protein family 3; KEGG: son:SO_1143 hypothetical protein; family 3 extracellular solute-binding protein 683800..684558 Desulfovibrio salexigens DSM 2638 8092276 YP_002990233.1 CDS Desal_0628 NC_012881.1 684568 685455 R PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dvl:Dvul_2082 TPR repeat-containing protein; hypothetical protein complement(684568..685455) Desulfovibrio salexigens DSM 2638 8092277 YP_002990234.1 CDS Desal_0629 NC_012881.1 685647 685955 R PFAM: HesB/YadR/YfhF-family protein; KEGG: dvm:DvMF_0158 HesB-like domain-containing protein; HesB/YadR/YfhF-family protein complement(685647..685955) Desulfovibrio salexigens DSM 2638 8092278 YP_002990235.1 CDS Desal_0630 NC_012881.1 686152 686706 D PFAM: regulatory protein TetR; KEGG: dde:Dde_3127 TetR family transcriptional regulator; TetR family transcriptional regulator 686152..686706 Desulfovibrio salexigens DSM 2638 8092279 YP_002990236.1 CDS Desal_0631 NC_012881.1 686841 688217 R TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: dps:DP1286 sodium/alanine symporter; amino acid carrier protein complement(686841..688217) Desulfovibrio salexigens DSM 2638 8092280 YP_002990237.1 CDS Desal_0632 NC_012881.1 688954 689430 D PFAM: TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: dvm:DvMF_1051 TPR repeat-containing protein; hypothetical protein 688954..689430 Desulfovibrio salexigens DSM 2638 8092281 YP_002990238.1 CDS Desal_0633 NC_012881.1 689517 690356 R PFAM: arginase/agmatinase/formiminoglutamase; KEGG: psb:Psyr_2212 arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase complement(689517..690356) Desulfovibrio salexigens DSM 2638 8092282 YP_002990239.1 CDS Desal_0634 NC_012881.1 690358 692895 R TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; heavy metal transport/detoxification protein; haloacid dehalogenase; KEGG: dde:Dde_1313 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(690358..692895) Desulfovibrio salexigens DSM 2638 8092283 YP_002990240.1 CDS Desal_0635 NC_012881.1 692985 693521 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 692985..693521 Desulfovibrio salexigens DSM 2638 8092284 YP_002990241.1 CDS Desal_0636 NC_012881.1 693575 694129 D PFAM: shikimate kinase; KEGG: dvl:Dvul_0723 shikimate kinase; shikimate kinase 693575..694129 Desulfovibrio salexigens DSM 2638 8092285 YP_002990242.1 CDS Desal_0637 NC_012881.1 694129 694725 D KEGG: dde:Dde_2610 hypothetical protein; hypothetical protein 694129..694725 Desulfovibrio salexigens DSM 2638 8092286 YP_002990243.1 CDS Desal_0638 NC_012881.1 694722 695561 R KEGG: dvu:DVU2899 hypothetical protein; hypothetical protein complement(694722..695561) Desulfovibrio salexigens DSM 2638 8092287 YP_002990244.1 CDS Desal_0639 NC_012881.1 695633 696712 D KEGG: dvl:Dvul_0111 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 695633..696712 Desulfovibrio salexigens DSM 2638 8092288 YP_002990245.1 CDS Desal_0640 NC_012881.1 696794 697756 D TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dvl:Dvul_1736 selenide, water dikinase; selenide, water dikinase 696794..697756 Desulfovibrio salexigens DSM 2638 8092289 YP_002990246.1 CDS Desal_0641 NC_012881.1 697858 698079 R KEGG: dde:Dde_2450 hypothetical protein; hypothetical protein complement(697858..698079) Desulfovibrio salexigens DSM 2638 8092290 YP_002990247.1 CDS hemC NC_012881.1 698263 699189 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(698263..699189) Desulfovibrio salexigens DSM 2638 8092291 YP_002990248.1 CDS Desal_0643 NC_012881.1 699224 699478 R TIGRFAM: regulatory protein, FmdB family; KEGG: sfu:Sfum_3203 hypothetical protein; FmdB family regulatory protein complement(699224..699478) Desulfovibrio salexigens DSM 2638 8092292 YP_002990249.1 CDS Desal_0644 NC_012881.1 699612 700601 R PFAM: methyltransferase type 11; KEGG: dvl:Dvul_2387 methyltransferase type 11; methyltransferase type 11 complement(699612..700601) Desulfovibrio salexigens DSM 2638 8092293 YP_002990250.1 CDS Desal_0645 NC_012881.1 700728 703247 R KEGG: dde:Dde_2444 Lon-A peptidase; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; ATPase AAA; ATP-dependent protease La complement(700728..703247) Desulfovibrio salexigens DSM 2638 8092294 YP_002990251.1 CDS Desal_0646 NC_012881.1 703424 703696 R PFAM: acylphosphatase; KEGG: dde:Dde_2164 acylphosphatase; acylphosphatase complement(703424..703696) Desulfovibrio salexigens DSM 2638 8092295 YP_002990252.1 CDS Desal_0647 NC_012881.1 703724 704401 R TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: dvl:Dvul_1864 DNA repair protein RadC; DNA repair protein RadC complement(703724..704401) Desulfovibrio salexigens DSM 2638 8092296 YP_002990253.1 CDS Desal_0648 NC_012881.1 704627 705607 R PFAM: DNA polymerase III delta; KEGG: dvl:Dvul_1863 DNA polymerase III, delta; DNA polymerase III delta complement(704627..705607) Desulfovibrio salexigens DSM 2638 8092297 YP_002990254.1 CDS Desal_0649 NC_012881.1 705629 706135 R KEGG: dvm:DvMF_3089 lipoprotein; hypothetical protein complement(705629..706135) Desulfovibrio salexigens DSM 2638 8092298 YP_002990255.1 CDS Desal_0650 NC_012881.1 706285 708780 R TIGRFAM: leucyl-tRNA synthetase; KEGG: dvm:DvMF_3090 leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(706285..708780) Desulfovibrio salexigens DSM 2638 8092299 YP_002990256.1 CDS Desal_0651 NC_012881.1 709034 709501 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: dde:Dde_2438 transcription antitermination factor NusB; NusB antitermination factor complement(709034..709501) Desulfovibrio salexigens DSM 2638 8092300 YP_002990257.1 CDS ribH NC_012881.1 709682 710152 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(709682..710152) Desulfovibrio salexigens DSM 2638 8092301 YP_002990258.1 CDS Desal_0653 NC_012881.1 710168 711385 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: dvm:DvMF_3093 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(710168..711385) Desulfovibrio salexigens DSM 2638 8092302 YP_002990259.1 CDS Desal_0654 NC_012881.1 711658 712314 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(711658..712314) Desulfovibrio salexigens DSM 2638 8092303 YP_002990260.1 CDS Desal_0655 NC_012881.1 712318 713451 R TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: dvl:Dvul_1856 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD complement(712318..713451) Desulfovibrio salexigens DSM 2638 8092304 YP_002990261.1 CDS Desal_0656 NC_012881.1 713435 713890 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dvl:Dvul_1855 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase complement(713435..713890) Desulfovibrio salexigens DSM 2638 8092305 YP_002990262.1 CDS glyA NC_012881.1 714085 715323 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(714085..715323) Desulfovibrio salexigens DSM 2638 8092306 YP_002990263.1 CDS Desal_0658 NC_012881.1 715665 716903 R TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: dvm:DvMF_3098 3-oxoacyl-(acyl-carrier-protein) synthase 2; 3-oxoacyl-ACP synthase complement(715665..716903) Desulfovibrio salexigens DSM 2638 8092307 YP_002990264.1 CDS acpP NC_012881.1 717024 717254 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(717024..717254) Desulfovibrio salexigens DSM 2638 8092308 YP_002990265.1 CDS Desal_0660 NC_012881.1 717290 718033 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: dvm:DvMF_3100 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase complement(717290..718033) Desulfovibrio salexigens DSM 2638 8092309 YP_002990266.1 CDS Desal_0661 NC_012881.1 718221 719207 R KEGG: dde:Dde_2428 3-oxoacyl-[acyl-carrier-protein] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; chalcone and stilbene synthase domain protein; 3-oxoacyl-ACP synthase complement(718221..719207) Desulfovibrio salexigens DSM 2638 8092310 YP_002990267.1 CDS Desal_0662 NC_012881.1 719333 720358 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(719333..720358) Desulfovibrio salexigens DSM 2638 8092311 YP_002990268.1 CDS Desal_0663 NC_012881.1 720351 720530 R TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: dvm:DvMF_3103 ribosomal protein L32; 50S ribosomal protein L32 complement(720351..720530) Desulfovibrio salexigens DSM 2638 8094130 YP_002990269.1 CDS Desal_0664 NC_012881.1 720582 721100 R PFAM: protein of unknown function DUF177; KEGG: dvl:Dvul_1847 hypothetical protein; hypothetical protein complement(720582..721100) Desulfovibrio salexigens DSM 2638 8094604 YP_002990270.1 CDS Desal_0665 NC_012881.1 721284 721496 D TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: dde:Dde_2425 50S ribosomal protein L28; 50S ribosomal protein L28 721284..721496 Desulfovibrio salexigens DSM 2638 8094605 YP_002990271.1 CDS Desal_0666 NC_012881.1 721589 721951 R KEGG: sfr:Sfri_1781 UspA domain protein; UspA domain-containing protein complement(721589..721951) Desulfovibrio salexigens DSM 2638 8094606 YP_002990272.1 CDS Desal_0667 NC_012881.1 722071 723999 R TIGRFAM: TRAP transporter 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dat:HRM2_16140 TRAP-type transporter 4TM/12TM fusion protein; TRAP transporter 4TM/12TM fusion protein complement(722071..723999) Desulfovibrio salexigens DSM 2638 8094607 YP_002990273.1 CDS Desal_0668 NC_012881.1 724057 725046 R TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: dat:HRM2_16150 TRAP-type transporter periplasmic component (TAXI family protein); TRAP transporter solute receptor, TAXI family complement(724057..725046) Desulfovibrio salexigens DSM 2638 8094608 YP_002990274.1 CDS Desal_0669 NC_012881.1 725291 726958 R PFAM: gamma-glutamyltranspeptidase; KEGG: dde:Dde_1641 gamma-glutamyltransferase 2; gamma-glutamyltransferase complement(725291..726958) Desulfovibrio salexigens DSM 2638 8094609 YP_002990275.1 CDS Desal_0670 NC_012881.1 727079 727894 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dvl:Dvul_1683 hypothetical protein; family 3 extracellular solute-binding protein 727079..727894 Desulfovibrio salexigens DSM 2638 8094610 YP_002990276.1 CDS Desal_0671 NC_012881.1 727976 729370 R TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: dvu:DVU2552 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase complement(727976..729370) Desulfovibrio salexigens DSM 2638 8094611 YP_002990277.1 CDS Desal_0672 NC_012881.1 729490 729714 R PFAM: nitrogen-fixing NifU domain protein; KEGG: dvm:DvMF_0997 nitrogen-fixing NifU domain protein; nitrogen-fixing NifU domain-containing protein complement(729490..729714) Desulfovibrio salexigens DSM 2638 8094612 YP_002990278.1 CDS Desal_0673 NC_012881.1 729858 730913 R PFAM: Metal-dependent hydrolase HDOD; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dde:Dde_3231 signal transduction protein; metal dependent phosphohydrolase complement(729858..730913) Desulfovibrio salexigens DSM 2638 8094613 YP_002990279.1 CDS Desal_0674 NC_012881.1 731059 731913 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dvm:DvMF_1043 substrate-binding region of ABC-type glycine betaine transport system; glycine/betaine ABC transporter substrate-binding protein complement(731059..731913) Desulfovibrio salexigens DSM 2638 8094614 YP_002990280.1 CDS Desal_0675 NC_012881.1 731944 732780 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0674 glycine/betaine/L-proline ABC transporter permease protein; glycine/betaine ABC transporter permease complement(731944..732780) Desulfovibrio salexigens DSM 2638 8094615 YP_002990281.1 CDS Desal_0676 NC_012881.1 732782 733972 R KEGG: dde:Dde_0673 glycine betaine/L-proline transport ATP binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter; CBS domain containing protein; SMART: ATPase AAA; CBS domain containing protein; glycine/betaine/L-proline ABC transporter ATPase complement(732782..733972) Desulfovibrio salexigens DSM 2638 8094616 YP_002990282.1 CDS Desal_0677 NC_012881.1 734582 735988 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: dde:Dde_1685 two component Fis family transcriptional regulator; Fis family transcriptional regulator complement(734582..735988) Desulfovibrio salexigens DSM 2638 8094617 YP_002990283.1 CDS Desal_0678 NC_012881.1 735988 737721 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; KEGG: dde:Dde_1684 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(735988..737721) Desulfovibrio salexigens DSM 2638 8094618 YP_002990284.1 CDS Desal_0679 NC_012881.1 737737 738588 R KEGG: dal:Dalk_0467 hypothetical protein; hypothetical protein complement(737737..738588) Desulfovibrio salexigens DSM 2638 8094619 YP_002990285.1 CDS Desal_0680 NC_012881.1 738735 739232 R KEGG: dvm:DvMF_2147 zinc resistance-associated protein; zinc resistance-associated protein complement(738735..739232) Desulfovibrio salexigens DSM 2638 8094620 YP_002990286.1 CDS Desal_0681 NC_012881.1 739568 740044 R KEGG: dvl:Dvul_0015 zinc resistance-associated protein; zinc resistance-associated protein complement(739568..740044) Desulfovibrio salexigens DSM 2638 8094621 YP_002990287.1 CDS Desal_0682 NC_012881.1 740252 740914 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvu:DVU3324 ABC transporter ATP-binding protein; ABC transporter complement(740252..740914) Desulfovibrio salexigens DSM 2638 8094622 YP_002990288.1 CDS Desal_0683 NC_012881.1 740924 742084 R PFAM: protein of unknown function DUF214; KEGG: dvm:DvMF_2063 protein of unknown function DUF214; hypothetical protein complement(740924..742084) Desulfovibrio salexigens DSM 2638 8094623 YP_002990289.1 CDS Desal_0684 NC_012881.1 742094 742507 R KEGG: gbm:Gbem_1096 hypothetical protein; hypothetical protein complement(742094..742507) Desulfovibrio salexigens DSM 2638 8094624 YP_002990290.1 CDS Desal_0685 NC_012881.1 742659 744347 R PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_0418 radical SAM family protein; radical SAM domain protein complement(742659..744347) Desulfovibrio salexigens DSM 2638 8094625 YP_002990291.1 CDS Desal_0686 NC_012881.1 744429 745712 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(744429..745712) Desulfovibrio salexigens DSM 2638 8094626 YP_002990292.1 CDS Desal_0687 NC_012881.1 745827 747056 R TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: dvm:DvMF_0952 cell division protein FtsA; cell division protein FtsA complement(745827..747056) Desulfovibrio salexigens DSM 2638 8094627 YP_002990293.1 CDS Desal_0688 NC_012881.1 747110 747964 R PFAM: polypeptide-transport-associated domain protein FtsQ-type; KEGG: dvm:DvMF_0953 polypeptide-transport-associated domain protein FtsQ-type; polypeptide-transport-associated domain protein FtsQ-type complement(747110..747964) Desulfovibrio salexigens DSM 2638 8094628 YP_002990294.1 CDS Desal_0689 NC_012881.1 747961 748848 R KEGG: dvl:Dvul_0743 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase complement(747961..748848) Desulfovibrio salexigens DSM 2638 8094629 YP_002990295.1 CDS murC NC_012881.1 748862 750274 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(748862..750274) Desulfovibrio salexigens DSM 2638 8094630 YP_002990296.1 CDS Desal_0691 NC_012881.1 750328 751410 R KEGG: dvl:Dvul_0741 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase complement(750328..751410) Desulfovibrio salexigens DSM 2638 8094631 YP_002990297.1 CDS Desal_0692 NC_012881.1 751410 752525 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: dvl:Dvul_0740 cell division protein FtsW; cell division protein FtsW complement(751410..752525) Desulfovibrio salexigens DSM 2638 8094632 YP_002990298.1 CDS Desal_0693 NC_012881.1 752522 753826 R TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: dde:Dde_1040 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(752522..753826) Desulfovibrio salexigens DSM 2638 8094633 YP_002990299.1 CDS mraY NC_012881.1 753835 754914 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(753835..754914) Desulfovibrio salexigens DSM 2638 8094634 YP_002990300.1 CDS Desal_0695 NC_012881.1 754911 756302 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: dde:Dde_1038 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(754911..756302) Desulfovibrio salexigens DSM 2638 8094635 YP_002990301.1 CDS Desal_0696 NC_012881.1 756299 757759 R TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: dde:Dde_1037 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase complement(756299..757759) Desulfovibrio salexigens DSM 2638 8094636 YP_002990302.1 CDS Desal_0697 NC_012881.1 757775 759721 R PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; KEGG: dde:Dde_1036 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase complement(757775..759721) Desulfovibrio salexigens DSM 2638 8094637 YP_002990303.1 CDS Desal_0698 NC_012881.1 759747 760034 R KEGG: dde:Dde_1035 hypothetical protein; hypothetical protein complement(759747..760034) Desulfovibrio salexigens DSM 2638 8094638 YP_002990304.1 CDS mraW NC_012881.1 760040 761014 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: dvm:DvMF_0963 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(760040..761014) Desulfovibrio salexigens DSM 2638 8094639 YP_002990305.1 CDS Desal_0700 NC_012881.1 761148 761597 R TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: dvl:Dvul_0732 cell division protein MraZ; MraZ protein complement(761148..761597) Desulfovibrio salexigens DSM 2638 8094640 YP_002990306.1 CDS Desal_0701 NC_012881.1 762048 763043 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvm:DvMF_0966 metal dependent phosphohydrolase; metal dependent phosphohydrolase 762048..763043 Desulfovibrio salexigens DSM 2638 8094641 YP_002990307.1 CDS Desal_0702 NC_012881.1 763193 763678 R PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dvl:Dvul_0728 XRE family transcriptional regulator; hypothetical protein complement(763193..763678) Desulfovibrio salexigens DSM 2638 8094642 YP_002990308.1 CDS Desal_0703 NC_012881.1 763802 765046 R KEGG: dde:Dde_2605 hypothetical protein; hypothetical protein complement(763802..765046) Desulfovibrio salexigens DSM 2638 8094643 YP_002990309.1 CDS Desal_0704 NC_012881.1 765104 769024 R PFAM: adenylate cyclase class-I; pentapeptide repeat protein; KEGG: dat:HRM2_23390 CyaA2; adenylate cyclase complement(765104..769024) Desulfovibrio salexigens DSM 2638 8094644 YP_002990310.1 CDS Desal_0705 NC_012881.1 769042 770439 R KEGG: sfu:Sfum_0289 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (uracil-5)-methyltransferase; deoxyribonuclease/rho motif-related TRAM; RNA methyltransferase, TrmA family complement(769042..770439) Desulfovibrio salexigens DSM 2638 8094645 YP_002990311.1 CDS Desal_0706 NC_012881.1 770479 770787 D KEGG: dvm:DvMF_2817 hypothetical protein; hypothetical protein 770479..770787 Desulfovibrio salexigens DSM 2638 8094646 YP_002990312.1 CDS Desal_0707 NC_012881.1 770899 771621 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; sporulation domain protein; KEGG: dde:Dde_0519 rare lipoprotein A; rare lipoprotein A 770899..771621 Desulfovibrio salexigens DSM 2638 8094647 YP_002990313.1 CDS Desal_0708 NC_012881.1 771703 772206 R PFAM: FxsA cytoplasmic membrane protein; KEGG: dat:HRM2_32730 FsxA; FxsA cytoplasmic membrane protein complement(771703..772206) Desulfovibrio salexigens DSM 2638 8094648 YP_002990314.1 CDS Desal_0709 NC_012881.1 772233 772955 R PFAM: protein of unknown function DUF81; KEGG: sfu:Sfum_2931 protein of unknown function DUF81; hypothetical protein complement(772233..772955) Desulfovibrio salexigens DSM 2638 8094649 YP_002990315.1 CDS rpsA NC_012881.1 773068 774579 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(773068..774579) Desulfovibrio salexigens DSM 2638 8094650 YP_002990316.1 CDS Desal_0711 NC_012881.1 774700 775452 R KEGG: sfu:Sfum_3160 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase complement(774700..775452) Desulfovibrio salexigens DSM 2638 8094651 YP_002990317.1 CDS Desal_0712 NC_012881.1 775505 776782 R PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dde:Dde_0090 2-hydroxyglutaryl-CoA dehydratase, beta subunit-like; 2-hydroxyglutaryl-CoA dehydratase subunit D complement(775505..776782) Desulfovibrio salexigens DSM 2638 8094652 YP_002990318.1 CDS Desal_0713 NC_012881.1 776987 778558 D KEGG: dal:Dalk_0282 hypothetical protein; hypothetical protein 776987..778558 Desulfovibrio salexigens DSM 2638 8094653 YP_002990319.1 CDS Desal_0714 NC_012881.1 778626 780932 R TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; Penicillin-binding domain protein; penicillin-binding protein transpeptidase; KEGG: mxa:MXAN_2419 penicillin-binding protein 1C; penicillin-binding protein 1C complement(778626..780932) Desulfovibrio salexigens DSM 2638 8094654 YP_002990320.1 CDS Desal_0715 NC_012881.1 781043 786442 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: nwi:Nwi_1535 extracellular alpha-helical protein; alpha-2-macroglobulin domain-containing protein complement(781043..786442) Desulfovibrio salexigens DSM 2638 8094655 YP_002990321.1 CDS Desal_0716 NC_012881.1 786673 787080 D KEGG: tbd:Tbd_0888 hypothetical protein; hypothetical protein 786673..787080 Desulfovibrio salexigens DSM 2638 8094656 YP_002990322.1 CDS Desal_0717 NC_012881.1 787083 789500 R KEGG: dal:Dalk_2497 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase complement(787083..789500) Desulfovibrio salexigens DSM 2638 8094657 YP_002990323.1 CDS Desal_0718 NC_012881.1 790177 792294 R PFAM: ApbE family lipoprotein; major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A1216 membrane-associated lipoprotein involved in thiamine biosynthesis; ApbE family lipoprotein complement(790177..792294) Desulfovibrio salexigens DSM 2638 8094660 YP_002990324.1 CDS Desal_0719 NC_012881.1 792318 792890 R PFAM: regulatory protein TetR; KEGG: dvm:DvMF_0336 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(792318..792890) Desulfovibrio salexigens DSM 2638 8094661 YP_002990325.1 CDS Desal_0720 NC_012881.1 793996 794643 D PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: dde:Dde_1258 fumarate reductase, cytochrome b subunit; fumarate reductase respiratory complex transmembrane subunit 793996..794643 Desulfovibrio salexigens DSM 2638 8094662 YP_002990326.1 CDS Desal_0721 NC_012881.1 794657 796510 D part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 794657..796510 Desulfovibrio salexigens DSM 2638 8094663 YP_002990327.1 CDS frdB NC_012881.1 796531 797268 D part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 796531..797268 Desulfovibrio salexigens DSM 2638 8094664 YP_002990328.1 CDS Desal_0723 NC_012881.1 797272 798111 D Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 797272..798111 Desulfovibrio salexigens DSM 2638 8094665 YP_002990329.1 CDS Desal_0724 NC_012881.1 798111 798668 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: dvm:DvMF_2462 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta 798111..798668 Desulfovibrio salexigens DSM 2638 8094666 YP_002990330.1 CDS Desal_0725 NC_012881.1 798708 800027 D PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: dde:Dde_1253 malate dehydrogenase; malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) 798708..800027 Desulfovibrio salexigens DSM 2638 8094667 YP_002990331.1 CDS Desal_0726 NC_012881.1 800278 801807 D TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter; citrate transporter; KEGG: dps:DP0767 Na/dicarboxylate cotransporter; anion transporter 800278..801807 Desulfovibrio salexigens DSM 2638 8094668 YP_002990332.1 CDS Desal_0727 NC_012881.1 802309 804414 D catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 802309..804414 Desulfovibrio salexigens DSM 2638 8094669 YP_002990333.1 CDS Desal_0728 NC_012881.1 804483 805547 D PFAM: choloylglycine hydrolase; KEGG: vcj:VCD_000455 hypothetical protein; choloylglycine hydrolase 804483..805547 Desulfovibrio salexigens DSM 2638 8094670 YP_002990334.1 CDS Desal_0729 NC_012881.1 805794 809318 D TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; pyruvate ferredoxin/flavodoxin oxidoreductase 805794..809318 Desulfovibrio salexigens DSM 2638 8094671 YP_002990335.1 CDS Desal_0730 NC_012881.1 809405 810310 R TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; KEGG: tcx:Tcr_2061 S6 modification enzyme RimK; alpha-L-glutamate ligase complement(809405..810310) Desulfovibrio salexigens DSM 2638 8094672 YP_002990336.1 CDS Desal_0731 NC_012881.1 810329 810799 R PFAM: protein of unknown function DUF785; KEGG: pca:Pcar_2309 hypothetical protein; hypothetical protein complement(810329..810799) Desulfovibrio salexigens DSM 2638 8094673 YP_002990337.1 CDS Desal_0732 NC_012881.1 811057 811761 D PFAM: phosphoadenosine phosphosulfate reductase; KEGG: dde:Dde_1789 phosphoadenylylsulfate reductase (thioredoxin); phosphoadenosine phosphosulfate reductase 811057..811761 Desulfovibrio salexigens DSM 2638 8094674 YP_002990338.1 CDS Desal_0733 NC_012881.1 811929 812639 D PFAM: uracil-DNA glycosylase superfamily; KEGG: pin:Ping_1283 uracil-DNA glycosylase; uracil-DNA glycosylase superfamily 811929..812639 Desulfovibrio salexigens DSM 2638 8094675 YP_002990339.1 CDS ispG NC_012881.1 812872 813948 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 812872..813948 Desulfovibrio salexigens DSM 2638 8094676 YP_002990340.1 CDS Desal_0735 NC_012881.1 813949 815691 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 813949..815691 Desulfovibrio salexigens DSM 2638 8094677 YP_002990341.1 CDS Desal_0736 NC_012881.1 815743 817122 D KEGG: dvm:DvMF_0122 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 815743..817122 Desulfovibrio salexigens DSM 2638 8094678 YP_002990342.1 CDS Desal_0737 NC_012881.1 817141 818040 D PFAM: peptidase M23; KEGG: dde:Dde_2203 M24/M37 family peptidase; peptidase M23 817141..818040 Desulfovibrio salexigens DSM 2638 8094679 YP_002990343.1 CDS Desal_0738 NC_012881.1 818147 818389 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 818147..818389 Desulfovibrio salexigens DSM 2638 8091456 YP_002990344.1 CDS Desal_0739 NC_012881.1 818379 819269 D PFAM: polyprenyl synthetase; KEGG: dde:Dde_2201 farnesyl-diphosphate synthase; polyprenyl synthetase 818379..819269 Desulfovibrio salexigens DSM 2638 8091641 YP_002990345.1 CDS Desal_0740 NC_012881.1 819333 821351 D TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase; transketolase; KEGG: dde:Dde_2200 1-deoxy-D-xylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase 819333..821351 Desulfovibrio salexigens DSM 2638 8091642 YP_002990346.1 CDS Desal_0741 NC_012881.1 821435 822073 R KEGG: mca:MCA0482 hypothetical protein; hypothetical protein complement(821435..822073) Desulfovibrio salexigens DSM 2638 8091643 YP_002990347.1 CDS Desal_0742 NC_012881.1 822154 822669 R KEGG: dvl:Dvul_1878 hypothetical protein; hypothetical protein complement(822154..822669) Desulfovibrio salexigens DSM 2638 8091644 YP_002990348.1 CDS Desal_0743 NC_012881.1 822836 824512 R PFAM: AMP-dependent synthetase and ligase; KEGG: dde:Dde_1725 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase complement(822836..824512) Desulfovibrio salexigens DSM 2638 8091645 YP_002990349.1 CDS Desal_0744 NC_012881.1 824699 825373 R hypothetical protein complement(824699..825373) Desulfovibrio salexigens DSM 2638 8091646 YP_002990350.1 CDS Desal_0745 NC_012881.1 825570 826523 D PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: dvm:DvMF_2021 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein 825570..826523 Desulfovibrio salexigens DSM 2638 8091647 YP_002990351.1 CDS Desal_0746 NC_012881.1 826526 827311 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: asa:ASA_2076 ABC-type amino acid transporter periplasmic binding protein; family 3 extracellular solute-binding protein complement(826526..827311) Desulfovibrio salexigens DSM 2638 8091648 YP_002990352.1 CDS Desal_0747 NC_012881.1 827427 827705 R hypothetical protein complement(827427..827705) Desulfovibrio salexigens DSM 2638 8091649 YP_002990353.1 CDS Desal_0748 NC_012881.1 827720 828709 R PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: gur:Gura_0007 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase (NAD(P)(+)) complement(827720..828709) Desulfovibrio salexigens DSM 2638 8091650 YP_002990354.1 CDS Desal_0749 NC_012881.1 828899 829267 D KEGG: dds:Ddes_1297 hypothetical protein; hypothetical protein 828899..829267 Desulfovibrio salexigens DSM 2638 8091651 YP_002990355.1 CDS nrfA NC_012881.1 829360 830871 R catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 complement(829360..830871) Desulfovibrio salexigens DSM 2638 8091652 YP_002990356.1 CDS Desal_0751 NC_012881.1 830898 831428 R TIGRFAM: cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c domain protein; KEGG: wsu:WS0970 small subunit of cytochrome c nitrite reductase; cytochrome c nitrate reductase, small subunit complement(830898..831428) Desulfovibrio salexigens DSM 2638 8091653 YP_002990357.1 CDS Desal_0752 NC_012881.1 831696 832181 D KEGG: lip:LI0907 transcriptional regulators; AsnC family transcriptional regulator 831696..832181 Desulfovibrio salexigens DSM 2638 8091654 YP_002990358.1 CDS Desal_0753 NC_012881.1 832356 833624 D TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: dvm:DvMF_2502 glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde-2,1-aminomutase 832356..833624 Desulfovibrio salexigens DSM 2638 8091655 YP_002990359.1 CDS Desal_0754 NC_012881.1 833760 834785 D PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: dal:Dalk_0451 cobalamin (vitamin B12) biosynthesis CbiG protein; cobalamin (vitamin B12) biosynthesis protein CbiG 833760..834785 Desulfovibrio salexigens DSM 2638 8091656 YP_002990360.1 CDS Desal_0755 NC_012881.1 834782 835540 D TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dvm:DvMF_2500 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 834782..835540 Desulfovibrio salexigens DSM 2638 8091657 YP_002990361.1 CDS Desal_0756 NC_012881.1 835679 836083 D PFAM: cytochrome c class III; KEGG: dde:Dde_3182 cytochrome c3; cytochrome c class III 835679..836083 Desulfovibrio salexigens DSM 2638 8091658 YP_002990362.1 CDS Desal_0757 NC_012881.1 836154 838265 D KEGG: fimbriae-associated protein; hypothetical protein 836154..838265 Desulfovibrio salexigens DSM 2638 8091659 YP_002990363.1 CDS Desal_0758 NC_012881.1 838510 838707 D KEGG: dde:Dde_3184 hypothetical protein; hypothetical protein 838510..838707 Desulfovibrio salexigens DSM 2638 8091660 YP_002990364.1 CDS Desal_0759 NC_012881.1 838708 839439 D TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; KEGG: dde:Dde_3185 demethylmenaquinone methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 838708..839439 Desulfovibrio salexigens DSM 2638 8091661 YP_002990365.1 CDS Desal_0760 NC_012881.1 839442 839651 R KEGG: dvm:DvMF_2495 hypothetical protein; hypothetical protein complement(839442..839651) Desulfovibrio salexigens DSM 2638 8091662 YP_002990366.1 CDS Desal_0761 NC_012881.1 839793 841103 D TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; Ketopantoate reductase ApbA/PanE domain protein; KEGG: dvl:Dvul_0210 UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 839793..841103 Desulfovibrio salexigens DSM 2638 8091663 YP_002990367.1 CDS Desal_0762 NC_012881.1 841118 841816 D PFAM: purine or other phosphorylase family 1; KEGG: dde:Dde_3188 hypothetical protein; purine or other phosphorylase family 1 841118..841816 Desulfovibrio salexigens DSM 2638 8091664 YP_002990368.1 CDS Desal_0763 NC_012881.1 841867 842835 D PFAM: polyprenyl synthetase; KEGG: dvm:DvMF_2490 polyprenyl synthetase; dimethylallyltranstransferase 841867..842835 Desulfovibrio salexigens DSM 2638 8091665 YP_002990369.1 CDS Desal_0764 NC_012881.1 842864 845350 D KEGG: dvm:DvMF_2489 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Metal-dependent hydrolase HDOD; SMART: GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 842864..845350 Desulfovibrio salexigens DSM 2638 8091666 YP_002990370.1 CDS Desal_0765 NC_012881.1 845383 848361 D PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: dde:Dde_3191 phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase 845383..848361 Desulfovibrio salexigens DSM 2638 8091667 YP_002990371.1 CDS Desal_0766 NC_012881.1 848550 850985 D PFAM: glycosyl transferase group 1; PHP domain protein; KEGG: dde:Dde_3613 glycosyl transferase domain-containing protein; group 1 glycosyl transferase 848550..850985 Desulfovibrio salexigens DSM 2638 8091668 YP_002990372.1 CDS Desal_0767 NC_012881.1 851090 852211 R KEGG: lpn:lpg0151 hypothetical protein; hypothetical protein complement(851090..852211) Desulfovibrio salexigens DSM 2638 8091669 YP_002990373.1 CDS Desal_0768 NC_012881.1 852244 852342 R hypothetical protein complement(852244..852342) Desulfovibrio salexigens DSM 2638 8091670 YP_002990374.1 CDS Desal_0769 NC_012881.1 852418 854001 R TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: dde:Dde_2473 chaperonin GroEL; chaperonin GroEL complement(852418..854001) Desulfovibrio salexigens DSM 2638 8091671 YP_002990375.1 CDS Desal_0770 NC_012881.1 854049 854321 R PFAM: chaperonin Cpn10; KEGG: dvl:Dvul_1195 chaperonin Cpn10; chaperonin Cpn10 complement(854049..854321) Desulfovibrio salexigens DSM 2638 8091672 YP_002990376.1 CDS Desal_0771 NC_012881.1 854805 855077 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: bcj:BCAL1585 histone-like DNA-binding phage protein; histone family protein DNA-binding protein 854805..855077 Desulfovibrio salexigens DSM 2638 8091673 YP_002990377.1 CDS Desal_0772 NC_012881.1 855269 856639 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dat:HRM2_00230 NorM; MATE efflux family protein 855269..856639 Desulfovibrio salexigens DSM 2638 8091674 YP_002990378.1 CDS Desal_0773 NC_012881.1 856848 858338 D PFAM: NHL repeat containing protein; KEGG: gbm:Gbem_2063 NHL repeat containing protein; NHL repeat containing protein 856848..858338 Desulfovibrio salexigens DSM 2638 8091675 YP_002990379.1 CDS Desal_0774 NC_012881.1 858419 859027 R catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM complement(858419..859027) Desulfovibrio salexigens DSM 2638 8091676 YP_002990380.1 CDS Desal_0775 NC_012881.1 859175 860803 R KEGG: dvl:Dvul_1570 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(859175..860803) Desulfovibrio salexigens DSM 2638 8091677 YP_002990381.1 CDS Desal_0776 NC_012881.1 861031 861204 D hypothetical protein 861031..861204 Desulfovibrio salexigens DSM 2638 8091678 YP_002990382.1 CDS Desal_0777 NC_012881.1 861338 861514 D KEGG: dvm:DvMF_1017 hypothetical protein; hypothetical protein 861338..861514 Desulfovibrio salexigens DSM 2638 8091679 YP_002990383.1 CDS Desal_0778 NC_012881.1 862228 864051 D PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; KEGG: ccv:CCV52592_0964 biotin/lipoyl attachment; biotin/lipoyl attachment domain-containing protein 862228..864051 Desulfovibrio salexigens DSM 2638 8091680 YP_002990384.1 CDS Desal_0779 NC_012881.1 864085 864363 D hypothetical protein 864085..864363 Desulfovibrio salexigens DSM 2638 8091681 YP_002990385.1 CDS Desal_0780 NC_012881.1 864373 865500 D KEGG: dat:HRM2_06280 OadB1; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 864373..865500 Desulfovibrio salexigens DSM 2638 8091682 YP_002990386.1 CDS Desal_0781 NC_012881.1 865512 865619 D hypothetical protein 865512..865619 Desulfovibrio salexigens DSM 2638 8091683 YP_002990387.1 CDS Desal_0782 NC_012881.1 865861 867606 D hypothetical protein 865861..867606 Desulfovibrio salexigens DSM 2638 8091684 YP_002990388.1 CDS Desal_0783 NC_012881.1 867698 869047 R PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: dvm:DvMF_0011 serine dehydratase alpha chain; serine dehydratase subunit alpha complement(867698..869047) Desulfovibrio salexigens DSM 2638 8091685 YP_002990389.1 CDS Desal_0784 NC_012881.1 869144 869548 D PFAM: protein of unknown function DUF523; KEGG: dvl:Dvul_2924 hypothetical protein; hypothetical protein 869144..869548 Desulfovibrio salexigens DSM 2638 8091686 YP_002990390.1 CDS Desal_0785 NC_012881.1 869623 869892 R KEGG: dde:Dde_0524 hypothetical protein; hypothetical protein complement(869623..869892) Desulfovibrio salexigens DSM 2638 8091687 YP_002990391.1 CDS Desal_0786 NC_012881.1 869903 870559 R PFAM: protein of unknown function UPF0153; KEGG: dde:Dde_3467 hypothetical protein; hypothetical protein complement(869903..870559) Desulfovibrio salexigens DSM 2638 8091688 YP_002990392.1 CDS Desal_0787 NC_012881.1 870946 872259 D KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type alpha subunit 870946..872259 Desulfovibrio salexigens DSM 2638 8091689 YP_002990393.1 CDS Desal_0788 NC_012881.1 872275 873420 D KEGG: dds:Ddes_2294 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; sulfite reductase, dissimilatory-type beta subunit 872275..873420 Desulfovibrio salexigens DSM 2638 8091690 YP_002990394.1 CDS Desal_0789 NC_012881.1 873486 873734 D PFAM: dissimilatory sulfite reductase D; KEGG: dvl:Dvul_2530 dissimilatory sulfite reductase B; dissimilatory sulfite reductase D 873486..873734 Desulfovibrio salexigens DSM 2638 8091691 YP_002990395.1 CDS Desal_0790 NC_012881.1 873916 875301 D TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: dde:Dde_0529 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 873916..875301 Desulfovibrio salexigens DSM 2638 8091692 YP_002990396.1 CDS Desal_0791 NC_012881.1 875304 876050 R KEGG: dde:Dde_2681 hypothetical protein; hypothetical protein complement(875304..876050) Desulfovibrio salexigens DSM 2638 8091693 YP_002990397.1 CDS Desal_0792 NC_012881.1 876160 876972 D TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: dde:Dde_3768 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 876160..876972 Desulfovibrio salexigens DSM 2638 8091694 YP_002990398.1 CDS Desal_0793 NC_012881.1 877218 879674 D PFAM: hemolysin-type calcium-binding region; KEGG: bja:bll7673 hypothetical protein; hemolysin-type calcium-binding region 877218..879674 Desulfovibrio salexigens DSM 2638 8091695 YP_002990399.1 CDS Desal_0794 NC_012881.1 879884 881917 D KEGG: bid:Bind_3695 proprotein convertase P; hypothetical protein 879884..881917 Desulfovibrio salexigens DSM 2638 8091696 YP_002990400.1 CDS Desal_0795 NC_012881.1 882103 882684 D KEGG: glo:Glov_0188 hypothetical protein; hypothetical protein 882103..882684 Desulfovibrio salexigens DSM 2638 8091697 YP_002990401.1 CDS Desal_0796 NC_012881.1 882786 883526 R KEGG: cjd:JJD26997_0965 TraT complement resistance protein; hypothetical protein complement(882786..883526) Desulfovibrio salexigens DSM 2638 8091698 YP_002990402.1 CDS Desal_0797 NC_012881.1 883538 885772 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: cti:RALTA_B0169 periplasmic protease; contains two PDZ domain; peptidase S1 and S6 chymotrypsin/Hap complement(883538..885772) Desulfovibrio salexigens DSM 2638 8091699 YP_002990403.1 CDS Desal_0798 NC_012881.1 885873 890093 R TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: sat:SYN_01576 activator of 2-hydroxyglutaryl-CoA dehydratase; CoA-substrate-specific enzyme activase complement(885873..890093) Desulfovibrio salexigens DSM 2638 8091700 YP_002990404.1 CDS Desal_0799 NC_012881.1 890098 890901 R PFAM: glutamine cyclotransferase; KEGG: xca:xccb100_1964 hypothetical protein; glutamine cyclotransferase complement(890098..890901) Desulfovibrio salexigens DSM 2638 8091701 YP_002990405.1 CDS Desal_0800 NC_012881.1 891081 892061 D PFAM: TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dde:Dde_2717 TPR repeat-containing protein; hypothetical protein 891081..892061 Desulfovibrio salexigens DSM 2638 8091702 YP_002990406.1 CDS Desal_0801 NC_012881.1 892058 892720 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dvm:DvMF_1541 TrkA-N domain protein; TrkA-N domain-containing protein complement(892058..892720) Desulfovibrio salexigens DSM 2638 8091703 YP_002990407.1 CDS Desal_0802 NC_012881.1 892820 894181 R PFAM: cation transporter; KEGG: dde:Dde_0567 TrkH family potassium uptake protein; H(+)-transporting two-sector ATPase complement(892820..894181) Desulfovibrio salexigens DSM 2638 8091704 YP_002990408.1 CDS Desal_0803 NC_012881.1 894357 896282 R PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; KEGG: gsu:GSU0913 ABC transporter ATP-binding protein; ABC transporter complement(894357..896282) Desulfovibrio salexigens DSM 2638 8091705 YP_002990409.1 CDS Desal_0804 NC_012881.1 896555 896956 D PFAM: Hpt domain protein; SMART: Hpt domain protein; KEGG: dps:DP2642 Che family two-component system sensory/regulatory protein; CheA signal transduction histidine kinase 896555..896956 Desulfovibrio salexigens DSM 2638 8091788 YP_002990410.1 CDS Desal_0805 NC_012881.1 897043 897483 R TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: dde:Dde_3667 flavodoxin, short chain; flavodoxin complement(897043..897483) Desulfovibrio salexigens DSM 2638 8091789 YP_002990411.1 CDS Desal_0806 NC_012881.1 898044 899135 D PFAM: DAHP synthetase I/KDSA; Chorismate mutase; KEGG: sdn:Sden_0622 DAHP synthetase I/KdsA; DAHP synthetase I/KDSA 898044..899135 Desulfovibrio salexigens DSM 2638 8091790 YP_002990412.1 CDS Desal_0807 NC_012881.1 899135 900223 D KEGG: ppr:PBPRA0281 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 899135..900223 Desulfovibrio salexigens DSM 2638 8091791 YP_002990413.1 CDS Desal_0808 NC_012881.1 900415 901575 D TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: dps:DP2948 cystathionine beta-lyase; cystathionine beta-lyase 900415..901575 Desulfovibrio salexigens DSM 2638 8091792 YP_002990414.1 CDS Desal_0809 NC_012881.1 901594 903456 R PFAM: glycosyl transferase family 39; KEGG: pat:Patl_3674 glycosyl transferase family protein; glycosyl transferase family protein complement(901594..903456) Desulfovibrio salexigens DSM 2638 8091793 YP_002990415.1 CDS Desal_0810 NC_012881.1 903460 904395 R KEGG: dde:Dde_1679 hypothetical protein; hypothetical protein complement(903460..904395) Desulfovibrio salexigens DSM 2638 8091794 YP_002990416.1 CDS Desal_0811 NC_012881.1 904516 904863 R PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(904516..904863) Desulfovibrio salexigens DSM 2638 8091795 YP_002990417.1 CDS Desal_0812 NC_012881.1 905147 905719 D hypothetical protein 905147..905719 Desulfovibrio salexigens DSM 2638 8091796 YP_002990418.1 CDS Desal_0813 NC_012881.1 906129 908402 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 906129..908402 Desulfovibrio salexigens DSM 2638 8091797 YP_002990419.1 CDS Desal_0814 NC_012881.1 908469 909350 D PFAM: methylenetetrahydrofolate reductase; KEGG: dvm:DvMF_3034 5,10-methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 908469..909350 Desulfovibrio salexigens DSM 2638 8091798 YP_002990420.1 CDS Desal_0815 NC_012881.1 909413 910075 R KEGG: bph:Bphy_5092 hypothetical protein; hypothetical protein complement(909413..910075) Desulfovibrio salexigens DSM 2638 8091799 YP_002990421.1 CDS Desal_0816 NC_012881.1 910196 911053 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_38090 ProW; binding-protein-dependent transport system inner membrane protein complement(910196..911053) Desulfovibrio salexigens DSM 2638 8091800 YP_002990422.1 CDS Desal_0817 NC_012881.1 911077 912087 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dat:HRM2_38080 ProX; glycine/betaine ABC transporter substrate-binding protein complement(911077..912087) Desulfovibrio salexigens DSM 2638 8091801 YP_002990423.1 CDS Desal_0818 NC_012881.1 912110 913306 R KEGG: dat:HRM2_38100 ProV; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter; CBS domain containing protein; SMART: ATPase AAA; glycine/betaine/L-proline ABC transporter ATPase complement(912110..913306) Desulfovibrio salexigens DSM 2638 8091802 YP_002990424.1 CDS Desal_0819 NC_012881.1 913944 914984 D KEGG: dvl:Dvul_0758 hypothetical protein; hypothetical protein 913944..914984 Desulfovibrio salexigens DSM 2638 8091804 YP_002990425.1 CDS Desal_0820 NC_012881.1 914987 917452 D KEGG: dde:Dde_0291 cytochrome bd-type quinol oxidase subunit 1-like; cytochrome bd-type quinol oxidase subunit 1-like protein 914987..917452 Desulfovibrio salexigens DSM 2638 8091805 YP_002990426.1 CDS Desal_0821 NC_012881.1 917560 919125 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dvm:DvMF_2125 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase complement(917560..919125) Desulfovibrio salexigens DSM 2638 8091806 YP_002990427.1 CDS Desal_0822 NC_012881.1 919805 920227 D KEGG: sse:Ssed_3803 hypothetical protein; hypothetical protein 919805..920227 Desulfovibrio salexigens DSM 2638 8091807 YP_002990428.1 CDS Desal_0823 NC_012881.1 920386 921372 D KEGG: bam:Bamb_0907 hypothetical protein; hypothetical protein 920386..921372 Desulfovibrio salexigens DSM 2638 8091808 YP_002990429.1 CDS Desal_0824 NC_012881.1 921448 922347 R KEGG: sfr:Sfri_3230 hypothetical protein; hypothetical protein complement(921448..922347) Desulfovibrio salexigens DSM 2638 8091809 YP_002990430.1 CDS Desal_0825 NC_012881.1 922502 923449 R PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: vha:VIBHAR_00707 hypothetical protein; hypothetical protein complement(922502..923449) Desulfovibrio salexigens DSM 2638 8091810 YP_002990431.1 CDS Desal_0826 NC_012881.1 923627 926311 R PFAM: ribonucleotide reductase large subunit; KEGG: maq:Maqu_1085 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; ribonucleoside-diphosphate reductase complement(923627..926311) Desulfovibrio salexigens DSM 2638 8091811 YP_002990432.1 CDS Desal_0827 NC_012881.1 927398 928687 R TIGRFAM: citrate synthase I; PFAM: citrate synthase; KEGG: scl:sce8281 hypothetical protein; citrate synthase I complement(927398..928687) Desulfovibrio salexigens DSM 2638 8091814 YP_002990433.1 CDS Desal_0828 NC_012881.1 929099 930475 R KEGG: dal:Dalk_1816 PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATPase AAA; PAS domain containing protein; PAS modulated Fis family sigma-54-specific transcriptional regulator complement(929099..930475) Desulfovibrio salexigens DSM 2638 8091815 YP_002990434.1 CDS Desal_0829 NC_012881.1 930734 931717 D KEGG: dal:Dalk_1084 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 930734..931717 Desulfovibrio salexigens DSM 2638 8091816 YP_002990435.1 CDS Desal_0830 NC_012881.1 931710 932180 D KEGG: dal:Dalk_1085 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein 931710..932180 Desulfovibrio salexigens DSM 2638 8091817 YP_002990436.1 CDS Desal_0831 NC_012881.1 932231 933859 D KEGG: sfu:Sfum_0090 cytochrome c family protein; cytochrome c family protein 932231..933859 Desulfovibrio salexigens DSM 2638 8091818 YP_002990437.1 CDS Desal_0832 NC_012881.1 933862 934509 D PFAM: cytochrome B561; KEGG: dol:Dole_3004 cytochrome b561; cytochrome B561 933862..934509 Desulfovibrio salexigens DSM 2638 8091819 YP_002990438.1 CDS Desal_0833 NC_012881.1 934594 935625 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: atc:AGR_C_1920 hypothetical protein; methyltransferase type 11 complement(934594..935625) Desulfovibrio salexigens DSM 2638 8091820 YP_002990439.1 CDS Desal_0834 NC_012881.1 935882 936076 R TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: har:HEAR0032 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(935882..936076) Desulfovibrio salexigens DSM 2638 8091821 YP_002990440.1 CDS Desal_0835 NC_012881.1 936095 936580 R hypothetical protein complement(936095..936580) Desulfovibrio salexigens DSM 2638 8091822 YP_002990441.1 CDS Desal_0836 NC_012881.1 936604 938538 R PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: dde:Dde_3228 molybdopterin binding domain-containing protein; LysR family transcriptional regulator complement(936604..938538) Desulfovibrio salexigens DSM 2638 8091823 YP_002990442.1 CDS Desal_0837 NC_012881.1 938551 939792 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: dde:Dde_0230 molybdopterin molybdochelatase; molybdenum cofactor synthesis domain-containing protein complement(938551..939792) Desulfovibrio salexigens DSM 2638 8091824 YP_002990443.1 CDS Desal_0838 NC_012881.1 939819 940523 R PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; Fe-S cluster domain protein; KEGG: dde:Dde_0719 molybdopterin-guanine dinucleotide biosynthesis protein-like; molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(939819..940523) Desulfovibrio salexigens DSM 2638 8091825 YP_002990444.1 CDS Desal_0839 NC_012881.1 940540 941424 R KEGG: dde:Dde_2015 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase complement(940540..941424) Desulfovibrio salexigens DSM 2638 8091826 YP_002990445.1 CDS Desal_0840 NC_012881.1 941611 942168 R PFAM: GPR1/FUN34/yaaH family protein; KEGG: dvm:DvMF_2076 GPR1/FUN34/YaaH family protein; GPR1/FUN34/yaaH family protein complement(941611..942168) Desulfovibrio salexigens DSM 2638 8091827 YP_002990446.1 CDS Desal_0841 NC_012881.1 942521 943732 D PFAM: sodium/hydrogen exchanger; KEGG: tcx:Tcr_0030 sodium/hydrogen exchanger; sodium/hydrogen exchanger 942521..943732 Desulfovibrio salexigens DSM 2638 8091828 YP_002990447.1 CDS Desal_0842 NC_012881.1 943754 944938 D PFAM: sodium/hydrogen exchanger; KEGG: tcx:Tcr_0030 sodium/hydrogen exchanger; sodium/hydrogen exchanger 943754..944938 Desulfovibrio salexigens DSM 2638 8091829 YP_002990448.1 CDS Desal_0843 NC_012881.1 945058 945414 D PFAM: type IV pilus assembly PilZ; KEGG: dde:Dde_1460 hypothetical protein; type IV pilus assembly PilZ 945058..945414 Desulfovibrio salexigens DSM 2638 8091830 YP_002990449.1 CDS Desal_0844 NC_012881.1 945389 945574 R KEGG: dde:Dde_3498 hypothetical protein; hypothetical protein complement(945389..945574) Desulfovibrio salexigens DSM 2638 8091831 YP_002990450.1 CDS Desal_0845 NC_012881.1 945672 946850 R PFAM: major facilitator superfamily MFS_1; KEGG: dvm:DvMF_0592 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(945672..946850) Desulfovibrio salexigens DSM 2638 8091832 YP_002990451.1 CDS Desal_0846 NC_012881.1 946991 947749 D PFAM: ion transporter; KEGG: mca:MCA0647 ion transport family protein; ion transporter 946991..947749 Desulfovibrio salexigens DSM 2638 8091833 YP_002990452.1 CDS Desal_0847 NC_012881.1 947746 948963 R KEGG: hypothetical protein; hypothetical protein complement(947746..948963) Desulfovibrio salexigens DSM 2638 8091834 YP_002990453.1 CDS Desal_0848 NC_012881.1 948976 950118 R KEGG: hypothetical protein; hypothetical protein complement(948976..950118) Desulfovibrio salexigens DSM 2638 8091835 YP_002990454.1 CDS Desal_0849 NC_012881.1 950121 951350 R KEGG: hypothetical protein; hypothetical protein complement(950121..951350) Desulfovibrio salexigens DSM 2638 8091836 YP_002990455.1 CDS Desal_0850 NC_012881.1 951369 952676 R KEGG: Zinc finger, C2H2 type family protein; hypothetical protein complement(951369..952676) Desulfovibrio salexigens DSM 2638 8091837 YP_002990456.1 CDS Desal_0851 NC_012881.1 952965 954098 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(952965..954098) Desulfovibrio salexigens DSM 2638 8091838 YP_002990457.1 CDS obgE NC_012881.1 954073 955131 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(954073..955131) Desulfovibrio salexigens DSM 2638 8091839 YP_002990458.1 CDS rpmA NC_012881.1 955395 955664 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(955395..955664) Desulfovibrio salexigens DSM 2638 8091840 YP_002990459.1 CDS Desal_0854 NC_012881.1 955698 956009 R TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: dvl:Dvul_2058 50S ribosomal protein L21; 50S ribosomal protein L21 complement(955698..956009) Desulfovibrio salexigens DSM 2638 8091841 YP_002990460.1 CDS Desal_0855 NC_012881.1 956079 959183 R PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; radical SAM domain protein; KEGG: pca:Pcar_2089 methyltransferase; methyltransferase type 11 complement(956079..959183) Desulfovibrio salexigens DSM 2638 8091842 YP_002990461.1 CDS Desal_0856 NC_012881.1 959254 959997 R KEGG: dvl:Dvul_0541 phosphoribosyltransferase; phosphoribosyltransferase complement(959254..959997) Desulfovibrio salexigens DSM 2638 8091843 YP_002990462.1 CDS Desal_0857 NC_012881.1 960001 960384 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: vfm:VFMJ11_A0096 sensor protein LuxQ; response regulator receiver protein complement(960001..960384) Desulfovibrio salexigens DSM 2638 8091844 YP_002990463.1 CDS Desal_0858 NC_012881.1 960377 960982 R KEGG: dvm:DvMF_2856 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(960377..960982) Desulfovibrio salexigens DSM 2638 8091845 YP_002990464.1 CDS Desal_0859 NC_012881.1 961240 961866 R PFAM: beta-lactamase domain protein; KEGG: dvl:Dvul_0544 beta-lactamase domain-containing protein; beta-lactamase complement(961240..961866) Desulfovibrio salexigens DSM 2638 8091846 YP_002990465.1 CDS Desal_0860 NC_012881.1 961866 962384 R PFAM: nitroreductase; KEGG: dvm:DvMF_2852 nitroreductase; nitroreductase complement(961866..962384) Desulfovibrio salexigens DSM 2638 8091847 YP_002990466.1 CDS Desal_0861 NC_012881.1 962399 962989 R KEGG: dac:Daci_0065 signal transduction protein; hypothetical protein complement(962399..962989) Desulfovibrio salexigens DSM 2638 8091848 YP_002990467.1 CDS Desal_0862 NC_012881.1 963120 963443 R KEGG: dde:Dde_2470 hypothetical protein; hypothetical protein complement(963120..963443) Desulfovibrio salexigens DSM 2638 8091849 YP_002990468.1 CDS Desal_0863 NC_012881.1 963856 964773 R KEGG: sme:SMa2237 hypothetical protein; hypothetical protein complement(963856..964773) Desulfovibrio salexigens DSM 2638 8091850 YP_002990469.1 CDS Desal_0864 NC_012881.1 964823 966382 R PFAM: SMC domain protein; KEGG: dde:Dde_2596 DNA repair protein RecN; SMC domain-containing protein complement(964823..966382) Desulfovibrio salexigens DSM 2638 8091851 YP_002990470.1 CDS Desal_0865 NC_012881.1 966394 967239 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0778 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(966394..967239) Desulfovibrio salexigens DSM 2638 8091852 YP_002990471.1 CDS Desal_0866 NC_012881.1 967239 968231 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0779 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(967239..968231) Desulfovibrio salexigens DSM 2638 8091853 YP_002990472.1 CDS Desal_0867 NC_012881.1 968657 969289 R PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: dal:Dalk_4418 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(968657..969289) Desulfovibrio salexigens DSM 2638 8091855 YP_002990473.1 CDS Desal_0868 NC_012881.1 969320 970390 R PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: bra:BRADO2616 hypothetical protein; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase complement(969320..970390) Desulfovibrio salexigens DSM 2638 8093494 YP_002990474.1 CDS Desal_0869 NC_012881.1 970841 971503 R PFAM: protein of unknown function DUF328; KEGG: nis:NIS_0970 hypothetical protein; hypothetical protein complement(970841..971503) Desulfovibrio salexigens DSM 2638 8093495 YP_002990475.1 CDS Desal_0870 NC_012881.1 971600 973339 R KEGG: glo:Glov_3381 hypothetical protein; hypothetical protein complement(971600..973339) Desulfovibrio salexigens DSM 2638 8092629 YP_002990476.1 CDS Desal_0871 NC_012881.1 973356 974234 R PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: shl:Shal_1398 methyltransferase type 12; methyltransferase type 12 complement(973356..974234) Desulfovibrio salexigens DSM 2638 8092630 YP_002990477.1 CDS Desal_0872 NC_012881.1 974243 975316 R PFAM: radical SAM domain protein; KEGG: geo:Geob_0662 radical SAM domain protein; radical SAM domain protein complement(974243..975316) Desulfovibrio salexigens DSM 2638 8092631 YP_002990478.1 CDS Desal_0873 NC_012881.1 975333 976382 R PFAM: radical SAM domain protein; KEGG: tdn:Suden_0182 radical SAM family protein; radical SAM domain protein complement(975333..976382) Desulfovibrio salexigens DSM 2638 8092632 YP_002990479.1 CDS Desal_0874 NC_012881.1 976363 977055 R KEGG: lip:LIA019 phosphoheptose isomerase; phosphoheptose isomerase complement(976363..977055) Desulfovibrio salexigens DSM 2638 8092633 YP_002990480.1 CDS Desal_0875 NC_012881.1 977266 978888 R TIGRFAM: cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: bja:blr5422 hypothetical protein; cytidyltransferase complement(977266..978888) Desulfovibrio salexigens DSM 2638 8092634 YP_002990481.1 CDS Desal_0876 NC_012881.1 979094 980554 R KEGG: mch:Mchl_3987 hypothetical protein; hypothetical protein complement(979094..980554) Desulfovibrio salexigens DSM 2638 8092635 YP_002990482.1 CDS Desal_0877 NC_012881.1 980920 981369 D KEGG: sat:SYN_02890 hypothetical protein; hypothetical protein 980920..981369 Desulfovibrio salexigens DSM 2638 8092636 YP_002990483.1 CDS Desal_0878 NC_012881.1 981387 982277 D KEGG: dol:Dole_2071 hypothetical protein; hypothetical protein 981387..982277 Desulfovibrio salexigens DSM 2638 8092637 YP_002990484.1 CDS Desal_0879 NC_012881.1 982626 984698 D PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; KEGG: dde:Dde_1279 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 982626..984698 Desulfovibrio salexigens DSM 2638 8092638 YP_002990485.1 CDS Desal_0880 NC_012881.1 984775 985365 R PFAM: regulatory protein TetR; KEGG: acp:A2cp1_3063 regulatory protein TetR; TetR family transcriptional regulator complement(984775..985365) Desulfovibrio salexigens DSM 2638 8092639 YP_002990486.1 CDS Desal_0881 NC_012881.1 985502 986302 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_2896 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 985502..986302 Desulfovibrio salexigens DSM 2638 8092640 YP_002990487.1 CDS Desal_0882 NC_012881.1 986470 988473 D PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: glo:Glov_3550 nitrate reductase; molybdopterin oxidoreductase 986470..988473 Desulfovibrio salexigens DSM 2638 8092641 YP_002990488.1 CDS Desal_0883 NC_012881.1 988570 989547 D PFAM: protein of unknown function DUF534; KEGG: mes:Meso_2867 protein of unknown function DUF534; hypothetical protein 988570..989547 Desulfovibrio salexigens DSM 2638 8092642 YP_002990489.1 CDS Desal_0884 NC_012881.1 989559 991823 D KEGG: dal:Dalk_5017 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 989559..991823 Desulfovibrio salexigens DSM 2638 8092643 YP_002990490.1 CDS Desal_0885 NC_012881.1 992182 993645 D PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: gur:Gura_1985 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein 992182..993645 Desulfovibrio salexigens DSM 2638 8092645 YP_002990491.1 CDS Desal_0886 NC_012881.1 994006 994242 D hypothetical protein 994006..994242 Desulfovibrio salexigens DSM 2638 8092646 YP_002990492.1 CDS Desal_0887 NC_012881.1 994484 995887 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: sfu:Sfum_0556 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 994484..995887 Desulfovibrio salexigens DSM 2638 8092647 YP_002990493.1 CDS Desal_0888 NC_012881.1 996112 999414 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bba:Bd2321 subtilisin-like serine protease; peptidase S8/S53 subtilisin kexin sedolisin 996112..999414 Desulfovibrio salexigens DSM 2638 8092648 YP_002990494.1 CDS Desal_0889 NC_012881.1 999475 999678 D PFAM: glutaredoxin; KEGG: dde:Dde_3766 hypothetical protein; glutaredoxin 999475..999678 Desulfovibrio salexigens DSM 2638 8092649 YP_002990495.1 CDS Desal_0890 NC_012881.1 999876 1001351 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: pol:Bpro_4465 adenylate/guanylate cyclase; adenylate/guanylate cyclase 999876..1001351 Desulfovibrio salexigens DSM 2638 8092650 YP_002990496.1 CDS Desal_0891 NC_012881.1 1001515 1002135 D PFAM: NADPH-dependent FMN reductase; KEGG: dvu:DVU0819 FMN reductase, NADPH-dependent; NADPH-dependent FMN reductase 1001515..1002135 Desulfovibrio salexigens DSM 2638 8092651 YP_002990497.1 CDS Desal_0892 NC_012881.1 1002385 1004388 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: dvm:DvMF_1209 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1002385..1004388 Desulfovibrio salexigens DSM 2638 8092652 YP_002990498.1 CDS Desal_0893 NC_012881.1 1004446 1006092 R PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_0909 glycosyl transferase family protein; family 2 glycosyl transferase complement(1004446..1006092) Desulfovibrio salexigens DSM 2638 8092653 YP_002990499.1 CDS Desal_0894 NC_012881.1 1006175 1006915 D KEGG: dde:Dde_2094 hypothetical protein; hypothetical protein 1006175..1006915 Desulfovibrio salexigens DSM 2638 8092654 YP_002990500.1 CDS mgsA NC_012881.1 1007517 1007990 D catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1007517..1007990 Desulfovibrio salexigens DSM 2638 8092656 YP_002990501.1 CDS Desal_0897 NC_012881.1 1008059 1008334 D hypothetical protein 1008059..1008334 Desulfovibrio salexigens DSM 2638 8092657 YP_002990502.1 CDS Desal_0898 NC_012881.1 1008487 1009209 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: dat:HRM2_32850 PrxU; alkyl hydroperoxide reductase 1008487..1009209 Desulfovibrio salexigens DSM 2638 8092658 YP_002990503.1 CDS Desal_0899 NC_012881.1 1009374 1010567 D PFAM: sulfate transporter; KEGG: dat:HRM2_13280 SulP1; sulfate transporter 1009374..1010567 Desulfovibrio salexigens DSM 2638 8092740 YP_002990504.1 CDS Desal_0900 NC_012881.1 1010638 1011489 D PFAM: aspartate/glutamate/uridylate kinase; KEGG: dat:HRM2_46200 uridylate kinase; aspartate/glutamate/uridylate kinase 1010638..1011489 Desulfovibrio salexigens DSM 2638 8092741 YP_002990505.1 CDS Desal_0901 NC_012881.1 1011544 1011750 R KEGG: dat:HRM2_46190 hypothetical protein; hypothetical protein complement(1011544..1011750) Desulfovibrio salexigens DSM 2638 8092742 YP_002990506.1 CDS Desal_0902 NC_012881.1 1011848 1012195 D PFAM: transcriptional regulator PadR family protein; KEGG: dat:HRM2_46180 transcriptional regulator; PadR family transcriptional regulator 1011848..1012195 Desulfovibrio salexigens DSM 2638 8092743 YP_002990507.1 CDS Desal_0903 NC_012881.1 1012203 1012979 R KEGG: sfu:Sfum_0275 conserved hypothetical cytosolic protein; hypothetical protein complement(1012203..1012979) Desulfovibrio salexigens DSM 2638 8092744 YP_002990508.1 CDS Desal_0904 NC_012881.1 1013116 1013895 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: hch:HCH_02571 amino acid ABC transporter periplasmic protein; family 3 extracellular solute-binding protein complement(1013116..1013895) Desulfovibrio salexigens DSM 2638 8092745 YP_002990509.1 CDS Desal_0905 NC_012881.1 1014090 1014746 D PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: dps:DP1664 assimilatory sulfite reductase; nitrite and sulfite reductase 4Fe-4S domain-containing protein 1014090..1014746 Desulfovibrio salexigens DSM 2638 8092746 YP_002990510.1 CDS Desal_0906 NC_012881.1 1014809 1015162 R PFAM: helix-turn-helix HxlR type; KEGG: dps:DP0943 hypothetical protein; HxlR family transcriptional regulator complement(1014809..1015162) Desulfovibrio salexigens DSM 2638 8092747 YP_002990511.1 CDS Desal_0907 NC_012881.1 1015583 1016737 D PFAM: iron-containing alcohol dehydrogenase; KEGG: alcohol dehydrogensae; iron-containing alcohol dehydrogenase 1015583..1016737 Desulfovibrio salexigens DSM 2638 8092748 YP_002990512.1 CDS Desal_0908 NC_012881.1 1017013 1018236 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 1017013..1018236 Desulfovibrio salexigens DSM 2638 8092749 YP_002990513.1 CDS Desal_0909 NC_012881.1 1018308 1019846 R PFAM: protein of unknown function DUF1566; KEGG: sse:Ssed_2588 hypothetical protein; hypothetical protein complement(1018308..1019846) Desulfovibrio salexigens DSM 2638 8092750 YP_002990514.1 CDS Desal_0910 NC_012881.1 1019975 1021378 R TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter; KEGG: abu:Abu_2185 sodium:sulfate symporter family protein; anion transporter complement(1019975..1021378) Desulfovibrio salexigens DSM 2638 8092751 YP_002990515.1 CDS Desal_0911 NC_012881.1 1021578 1024013 R KEGG: dde:Dde_1279 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(1021578..1024013) Desulfovibrio salexigens DSM 2638 8092752 YP_002990516.1 CDS Desal_0912 NC_012881.1 1024219 1024944 R KEGG: glo:Glov_2944 hypothetical protein; hypothetical protein complement(1024219..1024944) Desulfovibrio salexigens DSM 2638 8092753 YP_002990517.1 CDS Desal_0913 NC_012881.1 1024961 1026283 R PFAM: peptidase M48 Ste24p; KEGG: dol:Dole_2972 peptidase M48 Ste24p; peptidase M48 Ste24p complement(1024961..1026283) Desulfovibrio salexigens DSM 2638 8092754 YP_002990518.1 CDS Desal_0914 NC_012881.1 1026585 1027277 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvl:Dvul_2457 ABC transporter; ABC transporter 1026585..1027277 Desulfovibrio salexigens DSM 2638 8092755 YP_002990519.1 CDS Desal_0915 NC_012881.1 1027274 1028071 D PFAM: hypothetical protein; KEGG: dde:Dde_3461 hypothetical protein; hypothetical protein 1027274..1028071 Desulfovibrio salexigens DSM 2638 8092756 YP_002990520.1 CDS Desal_0916 NC_012881.1 1028144 1030051 D KEGG: rfr:Rfer_3391 PAS/PAC sensor protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 1028144..1030051 Desulfovibrio salexigens DSM 2638 8092757 YP_002990521.1 CDS Desal_0917 NC_012881.1 1030086 1032113 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dvm:DvMF_3073 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1030086..1032113) Desulfovibrio salexigens DSM 2638 8092758 YP_002990522.1 CDS Desal_0918 NC_012881.1 1032325 1032672 R PFAM: antibiotic biosynthesis monooxygenase; KEGG: dps:DP0295 hypothetical protein; antibiotic biosynthesis monooxygenase complement(1032325..1032672) Desulfovibrio salexigens DSM 2638 8092759 YP_002990523.1 CDS Desal_0919 NC_012881.1 1033527 1034003 D KEGG: dde:Dde_0580 cytochrome c family protein; cytochrome c family protein 1033527..1034003 Desulfovibrio salexigens DSM 2638 8092760 YP_002990524.1 CDS Desal_0920 NC_012881.1 1034009 1035154 D KEGG: dde:Dde_0581 electron transport complex protein RnfC; electron transport complex protein RnfC 1034009..1035154 Desulfovibrio salexigens DSM 2638 8092761 YP_002990525.1 CDS Desal_0921 NC_012881.1 1035309 1036280 D TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: dde:Dde_0582 electron transport complex, RnfABCDGE type, D subunit; RnfABCDGE type electron transport complex subunit D 1035309..1036280 Desulfovibrio salexigens DSM 2638 8092762 YP_002990526.1 CDS Desal_0922 NC_012881.1 1036284 1036853 D TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: dde:Dde_0583 electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 1036284..1036853 Desulfovibrio salexigens DSM 2638 8092763 YP_002990527.1 CDS Desal_0923 NC_012881.1 1036863 1037549 D in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 1036863..1037549 Desulfovibrio salexigens DSM 2638 8092764 YP_002990528.1 CDS Desal_0924 NC_012881.1 1037564 1038139 D TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: dds:Ddes_1242 electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 1037564..1038139 Desulfovibrio salexigens DSM 2638 8092765 YP_002990529.1 CDS Desal_0925 NC_012881.1 1038167 1040281 D TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: dal:Dalk_0215 dihydropyrimidine dehydrogenase (NADP(+)); RnfABCDGE type electron transport complex subunit B 1038167..1040281 Desulfovibrio salexigens DSM 2638 8092766 YP_002990530.1 CDS Desal_0926 NC_012881.1 1040294 1041340 D PFAM: ApbE family lipoprotein; KEGG: dde:Dde_0587 hypotehtical protein; ApbE family lipoprotein 1040294..1041340 Desulfovibrio salexigens DSM 2638 8092767 YP_002990531.1 CDS Desal_0927 NC_012881.1 1041604 1043277 R KEGG: dde:Dde_3022 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(1041604..1043277) Desulfovibrio salexigens DSM 2638 8092768 YP_002990532.1 CDS Desal_0928 NC_012881.1 1043385 1044713 R KEGG: sse:Ssed_2229 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; extracellular solute-binding protein family 3; SMART: GGDEF domain containing protein; extracellular solute-binding protein family 3; diguanylate cyclase with extracellular sensor complement(1043385..1044713) Desulfovibrio salexigens DSM 2638 8092769 YP_002990533.1 CDS Desal_0929 NC_012881.1 1044949 1045959 D PFAM: basic membrane lipoprotein; KEGG: rhi:NGR_c35400 basic membrane lipoprotein; basic membrane lipoprotein 1044949..1045959 Desulfovibrio salexigens DSM 2638 8092770 YP_002990534.1 CDS Desal_0930 NC_012881.1 1045949 1047133 D KEGG: hch:HCH_01316 response regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase 1045949..1047133 Desulfovibrio salexigens DSM 2638 8092771 YP_002990535.1 CDS Desal_0931 NC_012881.1 1047165 1047491 D PFAM: small multidrug resistance protein; KEGG: dvl:Dvul_1177 small multidrug resistance protein; small multidrug resistance protein 1047165..1047491 Desulfovibrio salexigens DSM 2638 8092772 YP_002990536.1 CDS Desal_0932 NC_012881.1 1047697 1049430 D KEGG: dde:Dde_2814 methyl-accepting chemotaxis sensory transducer; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1047697..1049430 Desulfovibrio salexigens DSM 2638 8092773 YP_002990537.1 CDS Desal_0933 NC_012881.1 1049555 1050607 D PFAM: ion transporter ; TrkA-N domain protein; KEGG: dal:Dalk_2078 TrkA-N domain protein; ion transporter 1049555..1050607 Desulfovibrio salexigens DSM 2638 8092774 YP_002990538.1 CDS Desal_0934 NC_012881.1 1050623 1052134 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: glo:Glov_0136 multi-sensor signal transduction histidine kinase; histidine kinase complement(1050623..1052134) Desulfovibrio salexigens DSM 2638 8092775 YP_002990539.1 CDS Desal_0935 NC_012881.1 1052131 1052691 R KEGG: gbm:Gbem_0112 transmembrane protein; hypothetical protein complement(1052131..1052691) Desulfovibrio salexigens DSM 2638 8092776 YP_002990540.1 CDS Desal_0936 NC_012881.1 1052679 1054610 R PFAM: TonB-dependent receptor plug; KEGG: dat:HRM2_45170 puter membrane receptor; TonB-dependent receptor plug complement(1052679..1054610) Desulfovibrio salexigens DSM 2638 8092777 YP_002990541.1 CDS Desal_0937 NC_012881.1 1054613 1055311 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: yps:YPTB2719 two-component system response regulator; transcriptional regulator complement(1054613..1055311) Desulfovibrio salexigens DSM 2638 8092778 YP_002990542.1 CDS Desal_0938 NC_012881.1 1055562 1056419 D PFAM: flagellin domain protein; KEGG: dvl:Dvul_1638 flagellin domain-containing protein; flagellin 1055562..1056419 Desulfovibrio salexigens DSM 2638 8092779 YP_002990543.1 CDS Desal_0939 NC_012881.1 1056761 1057306 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; regulatory protein LuxR; KEGG: dvm:DvMF_1623 RNA polymerase, sigma-24 subunit, ECF subfamily; LuxR family transcriptional regulator 1056761..1057306 Desulfovibrio salexigens DSM 2638 8092780 YP_002990544.1 CDS Desal_0940 NC_012881.1 1057303 1057983 D PFAM: flagellar hook capping protein; KEGG: dvm:DvMF_1617 flagellar hook capping protein; flagellar hook capping protein 1057303..1057983 Desulfovibrio salexigens DSM 2638 8092781 YP_002990545.1 CDS Desal_0941 NC_012881.1 1058007 1059548 D PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body FlaE domain protein; KEGG: dvm:DvMF_1618 protein of unknown function DUF1078 domain protein; hypothetical protein 1058007..1059548 Desulfovibrio salexigens DSM 2638 8092782 YP_002990546.1 CDS Desal_0942 NC_012881.1 1059579 1061330 D TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: dvm:DvMF_1619 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 1059579..1061330 Desulfovibrio salexigens DSM 2638 8092783 YP_002990547.1 CDS Desal_0943 NC_012881.1 1061410 1062618 D TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: dvm:DvMF_2525 flagellar hook-associated protein 3; flagellar hook-associated protein 3 1061410..1062618 Desulfovibrio salexigens DSM 2638 8092784 YP_002990548.1 CDS Desal_0944 NC_012881.1 1062629 1064353 D PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: dvm:DvMF_1621 flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain-containing protein 1062629..1064353 Desulfovibrio salexigens DSM 2638 8092785 YP_002990549.1 CDS Desal_0945 NC_012881.1 1064375 1065232 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rlt:Rleg2_5582 transcriptional regulator, AraC family; AraC family transcriptional regulator 1064375..1065232 Desulfovibrio salexigens DSM 2638 8092786 YP_002990550.1 CDS Desal_0946 NC_012881.1 1065354 1065692 D TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: abb:ABBFA_003164 protein CsaA; export-related chaperone CsaA 1065354..1065692 Desulfovibrio salexigens DSM 2638 8092787 YP_002990551.1 CDS Desal_0947 NC_012881.1 1065808 1066926 R KEGG: bba:Bd0901 Zn-dependent hydrolase; Zn-dependent hydrolase complement(1065808..1066926) Desulfovibrio salexigens DSM 2638 8092788 YP_002990552.1 CDS Desal_0948 NC_012881.1 1067000 1070128 R PFAM: acriflavin resistance protein; KEGG: dol:Dole_1215 acriflavin resistance protein; acriflavin resistance protein complement(1067000..1070128) Desulfovibrio salexigens DSM 2638 8092789 YP_002990553.1 CDS Desal_0949 NC_012881.1 1070125 1071165 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dol:Dole_1216 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit complement(1070125..1071165) Desulfovibrio salexigens DSM 2638 8092790 YP_002990554.1 CDS Desal_0950 NC_012881.1 1071155 1071790 R PFAM: regulatory protein TetR; KEGG: dvm:DvMF_2165 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1071155..1071790) Desulfovibrio salexigens DSM 2638 8092791 YP_002990555.1 CDS Desal_0951 NC_012881.1 1072105 1073259 D TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: dde:Dde_0668 Bcr/CflA subfamily drug resistance transporter; Bcr/CflA subfamily drug resistance transporter 1072105..1073259 Desulfovibrio salexigens DSM 2638 8092792 YP_002990556.1 CDS Desal_0952 NC_012881.1 1073420 1073719 D hypothetical protein 1073420..1073719 Desulfovibrio salexigens DSM 2638 8092793 YP_002990557.1 CDS Desal_0953 NC_012881.1 1073794 1074093 R PFAM: antibiotic biosynthesis monooxygenase; KEGG: dal:Dalk_4016 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(1073794..1074093) Desulfovibrio salexigens DSM 2638 8092794 YP_002990558.1 CDS Desal_0954 NC_012881.1 1074316 1074798 D KEGG: avi:Avi_2045 methylated-DNA--protein-cysteinemethyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 1074316..1074798 Desulfovibrio salexigens DSM 2638 8092795 YP_002990559.1 CDS Desal_0955 NC_012881.1 1074807 1075898 R PFAM: TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: dat:HRM2_46700 TPR-repeat-containing protein with CheY-like receiver; response regulator receiver protein complement(1074807..1075898) Desulfovibrio salexigens DSM 2638 8092796 YP_002990560.1 CDS Desal_0956 NC_012881.1 1076062 1076445 R KEGG: dps:DP2880 hypothetical protein; hypothetical protein complement(1076062..1076445) Desulfovibrio salexigens DSM 2638 8092797 YP_002990561.1 CDS Desal_0957 NC_012881.1 1076557 1078965 R KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein; multi-sensor hybrid histidine kinase complement(1076557..1078965) Desulfovibrio salexigens DSM 2638 8092798 YP_002990562.1 CDS Desal_0958 NC_012881.1 1079242 1080210 D PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: dal:Dalk_2348 protein of unknown function DUF523; hypothetical protein 1079242..1080210 Desulfovibrio salexigens DSM 2638 8092799 YP_002990563.1 CDS Desal_0959 NC_012881.1 1080203 1081750 D PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: dde:Dde_0236 hypothetical protein; NAD-dependent epimerase/dehydratase 1080203..1081750 Desulfovibrio salexigens DSM 2638 8092800 YP_002990564.1 CDS Desal_0960 NC_012881.1 1081743 1083080 D TIGRFAM: deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: ppd:Ppro_2012 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase 1081743..1083080 Desulfovibrio salexigens DSM 2638 8092801 YP_002990565.1 CDS Desal_0961 NC_012881.1 1083261 1083623 D KEGG: dde:Dde_0607 hypothetical protein; hypothetical protein 1083261..1083623 Desulfovibrio salexigens DSM 2638 8092802 YP_002990566.1 CDS Desal_0962 NC_012881.1 1083678 1084388 R KEGG: asu:Asuc_1309 hypothetical protein; hypothetical protein complement(1083678..1084388) Desulfovibrio salexigens DSM 2638 8092803 YP_002990567.1 CDS Desal_0963 NC_012881.1 1084523 1085461 R KEGG: scl:sce3322 put. D-ribose-binding periplasmic protein; D-ribose-binding periplasmic protein complement(1084523..1085461) Desulfovibrio salexigens DSM 2638 8092804 YP_002990568.1 CDS Desal_0964 NC_012881.1 1085666 1086358 D PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: sfu:Sfum_0509 peptidase M15D, VanX D-ala-D-ala dipeptidase; D-Ala-D-Ala dipeptidase 1085666..1086358 Desulfovibrio salexigens DSM 2638 8092805 YP_002990569.1 CDS Desal_0965 NC_012881.1 1086488 1087585 D KEGG: dat:HRM2_08740 MsrAB; TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Methionine sulfoxide reductase A; methionine-R-sulfoxide reductase 1086488..1087585 Desulfovibrio salexigens DSM 2638 8092806 YP_002990570.1 CDS Desal_0966 NC_012881.1 1087686 1088516 D PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_2150 glycosyl transferase family 2; family 2 glycosyl transferase 1087686..1088516 Desulfovibrio salexigens DSM 2638 8092807 YP_002990571.1 CDS Desal_0967 NC_012881.1 1088532 1089464 D TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: gsu:GSU0249 hypothetical protein; LPXTG-motif cell wall anchor domain-containing protein 1088532..1089464 Desulfovibrio salexigens DSM 2638 8092808 YP_002990572.1 CDS Desal_0968 NC_012881.1 1089461 1090006 R PFAM: isochorismatase hydrolase; KEGG: sfu:Sfum_3430 isochorismatase hydrolase; isochorismatase hydrolase complement(1089461..1090006) Desulfovibrio salexigens DSM 2638 8092809 YP_002990573.1 CDS Desal_0969 NC_012881.1 1090120 1091091 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_00844 transcriptional regulator; AraC family transcriptional regulator 1090120..1091091 Desulfovibrio salexigens DSM 2638 8092810 YP_002990574.1 CDS Desal_0970 NC_012881.1 1091205 1092041 D KEGG: abu:Abu_2284 hypothetical protein; hypothetical protein 1091205..1092041 Desulfovibrio salexigens DSM 2638 8092811 YP_002990575.1 CDS Desal_0971 NC_012881.1 1092078 1092962 R PFAM: VacJ family lipoprotein; KEGG: dvl:Dvul_0227 VacJ family lipoprotein; VacJ family lipoprotein complement(1092078..1092962) Desulfovibrio salexigens DSM 2638 8092812 YP_002990576.1 CDS Desal_0972 NC_012881.1 1092959 1094254 R KEGG: dvl:Dvul_0228 hypothetical protein; hypothetical protein complement(1092959..1094254) Desulfovibrio salexigens DSM 2638 8092813 YP_002990577.1 CDS Desal_0973 NC_012881.1 1094334 1094792 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dal:Dalk_4719 transcriptional regulator, MarR family; MarR family transcriptional regulator 1094334..1094792 Desulfovibrio salexigens DSM 2638 8092814 YP_002990578.1 CDS Desal_0974 NC_012881.1 1094842 1095858 D PFAM: methyltransferase type 12; O-methyltransferase family 2; KEGG: scl:sce1219 methyltransferase; methyltransferase type 12 1094842..1095858 Desulfovibrio salexigens DSM 2638 8094277 YP_002990579.1 CDS Desal_0975 NC_012881.1 1095900 1096331 R hypothetical protein complement(1095900..1096331) Desulfovibrio salexigens DSM 2638 8094319 YP_002990580.1 CDS Desal_0976 NC_012881.1 1096324 1096863 R TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; PFAM: polynucleotide kinase 3 phosphatase central region; KEGG: bid:Bind_1030 histidinol-phosphate phosphatase family protein; HAD-superfamily hydrolase complement(1096324..1096863) Desulfovibrio salexigens DSM 2638 8094320 YP_002990581.1 CDS Desal_0977 NC_012881.1 1097002 1097802 R PFAM: TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: dde:Dde_3645 TPR repeat-containing protein; hypothetical protein complement(1097002..1097802) Desulfovibrio salexigens DSM 2638 8094321 YP_002990582.1 CDS Desal_0978 NC_012881.1 1097834 1098958 R TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: dvl:Dvul_0268 carbamoyl phosphate synthase small subunit; carbamoyl-phosphate synthase small subunit complement(1097834..1098958) Desulfovibrio salexigens DSM 2638 8094322 YP_002990583.1 CDS Desal_0979 NC_012881.1 1098955 1099698 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(1098955..1099698) Desulfovibrio salexigens DSM 2638 8094323 YP_002990584.1 CDS Desal_0980 NC_012881.1 1099702 1100976 R PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: dde:Dde_0367 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(1099702..1100976) Desulfovibrio salexigens DSM 2638 8094324 YP_002990585.1 CDS Desal_0981 NC_012881.1 1101015 1101923 R KEGG: dvu:DVU0334 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; D-alanine--D-alanine ligase complement(1101015..1101923) Desulfovibrio salexigens DSM 2638 8094325 YP_002990586.1 CDS Desal_0982 NC_012881.1 1101889 1102548 R TIGRFAM: metal dependent phophohydrolase; KEGG: dvl:Dvul_2650 metal dependent phosphohydrolase; metal dependent phophohydrolase complement(1101889..1102548) Desulfovibrio salexigens DSM 2638 8094326 YP_002990587.1 CDS Desal_0983 NC_012881.1 1102727 1103011 R hypothetical protein complement(1102727..1103011) Desulfovibrio salexigens DSM 2638 8094327 YP_002990588.1 CDS Desal_0984 NC_012881.1 1103418 1103735 D KEGG: dvl:Dvul_0534 DsrC family protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; TusE/DsrC/DsvC family sulfur relay protein 1103418..1103735 Desulfovibrio salexigens DSM 2638 8094328 YP_002990589.1 CDS Desal_0985 NC_012881.1 1103922 1106288 D KEGG: sfu:Sfum_0907 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; PAS fold domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase 1103922..1106288 Desulfovibrio salexigens DSM 2638 8094329 YP_002990590.1 CDS Desal_0986 NC_012881.1 1106311 1107024 R hypothetical protein complement(1106311..1107024) Desulfovibrio salexigens DSM 2638 8094330 YP_002990591.1 CDS Desal_0987 NC_012881.1 1107058 1108185 R KEGG: dvm:DvMF_0138 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase complement(1107058..1108185) Desulfovibrio salexigens DSM 2638 8094331 YP_002990592.1 CDS Desal_0988 NC_012881.1 1108397 1108657 D hypothetical protein 1108397..1108657 Desulfovibrio salexigens DSM 2638 8094332 YP_002990593.1 CDS Desal_0989 NC_012881.1 1108709 1109491 R PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: dvm:DvMF_1037 peptidase A24A domain protein; peptidase A24A domain-containing protein complement(1108709..1109491) Desulfovibrio salexigens DSM 2638 8094333 YP_002990594.1 CDS Desal_0990 NC_012881.1 1109614 1110903 D KEGG: dde:Dde_3457 phenylacetate-CoA ligase; phenylacetate--CoA ligase 1109614..1110903 Desulfovibrio salexigens DSM 2638 8094334 YP_002990595.1 CDS Desal_0991 NC_012881.1 1110941 1111861 R PFAM: periplasmic solute binding protein; KEGG: pen:PSEEN3242 hypothetical protein; periplasmic solute binding protein complement(1110941..1111861) Desulfovibrio salexigens DSM 2638 8094335 YP_002990596.1 CDS Desal_0992 NC_012881.1 1111877 1112782 R PFAM: ABC transporter; KEGG: pfs:PFLU2042 ABC transport system, membrane protein; ABC transporter complement(1111877..1112782) Desulfovibrio salexigens DSM 2638 8094336 YP_002990597.1 CDS Desal_0993 NC_012881.1 1112782 1113510 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ppg:PputGB1_2114 ABC transporter; ABC transporter complement(1112782..1113510) Desulfovibrio salexigens DSM 2638 8094337 YP_002990598.1 CDS Desal_0994 NC_012881.1 1113511 1114425 R PFAM: periplasmic solute binding protein; KEGG: vha:VIBHAR_06745 hypothetical protein; periplasmic solute binding protein complement(1113511..1114425) Desulfovibrio salexigens DSM 2638 8094338 YP_002990599.1 CDS Desal_0995 NC_012881.1 1114429 1115061 R KEGG: pen:PSEEN3238 hypothetical protein; hypothetical protein complement(1114429..1115061) Desulfovibrio salexigens DSM 2638 8094339 YP_002990600.1 CDS Desal_0996 NC_012881.1 1115219 1117471 R KEGG: dvl:Dvul_2438 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polynucleotide phosphorylase/polyadenylase complement(1115219..1117471) Desulfovibrio salexigens DSM 2638 8094340 YP_002990601.1 CDS Desal_0997 NC_012881.1 1117716 1117985 R TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: dde:Dde_3166 30S ribosomal protein S15; 30S ribosomal protein S15 complement(1117716..1117985) Desulfovibrio salexigens DSM 2638 8094341 YP_002990602.1 CDS Desal_0998 NC_012881.1 1118060 1118992 R TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: dde:Dde_3165 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B complement(1118060..1118992) Desulfovibrio salexigens DSM 2638 8094342 YP_002990603.1 CDS Desal_0999 NC_012881.1 1119005 1119970 R PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: dde:Dde_3164 DHH family protein; phosphoesterase RecJ domain-containing protein complement(1119005..1119970) Desulfovibrio salexigens DSM 2638 8094343 YP_002990604.1 CDS Desal_1000 NC_012881.1 1119933 1120286 R TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: cps:CPS_2204 ribosome-binding factor A; ribosome-binding factor A complement(1119933..1120286) Desulfovibrio salexigens DSM 2638 8094344 YP_002990605.1 CDS Desal_1001 NC_012881.1 1120331 1120618 R PFAM: protein of unknown function DUF503; KEGG: dvl:Dvul_2434 hypothetical protein; hypothetical protein complement(1120331..1120618) Desulfovibrio salexigens DSM 2638 8094345 YP_002990606.1 CDS Desal_1002 NC_012881.1 1120675 1123563 R TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_3162 translation initiation factor IF-2; translation initiation factor IF-2 complement(1120675..1123563) Desulfovibrio salexigens DSM 2638 8094346 YP_002990607.1 CDS Desal_1003 NC_012881.1 1123564 1123767 D hypothetical protein 1123564..1123767 Desulfovibrio salexigens DSM 2638 8094347 YP_002990608.1 CDS nusA NC_012881.1 1123855 1125225 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(1123855..1125225) Desulfovibrio salexigens DSM 2638 8094348 YP_002990609.1 CDS Desal_1005 NC_012881.1 1125301 1125768 R PFAM: protein of unknown function DUF150; KEGG: dvl:Dvul_2430 hypothetical protein; hypothetical protein complement(1125301..1125768) Desulfovibrio salexigens DSM 2638 8094349 YP_002990610.1 CDS Desal_1006 NC_012881.1 1125885 1126172 D hypothetical protein 1125885..1126172 Desulfovibrio salexigens DSM 2638 8094350 YP_002990611.1 CDS Desal_1007 NC_012881.1 1126201 1126473 D hypothetical protein 1126201..1126473 Desulfovibrio salexigens DSM 2638 8094351 YP_002990612.1 CDS Desal_1008 NC_012881.1 1126617 1127384 D TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: dde:Dde_3159 flagellar basal-body rod protein; flagellar basal-body rod protein FlgF 1126617..1127384 Desulfovibrio salexigens DSM 2638 8094352 YP_002990613.1 CDS flgG NC_012881.1 1127410 1128192 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1127410..1128192 Desulfovibrio salexigens DSM 2638 8094353 YP_002990614.1 CDS Desal_1010 NC_012881.1 1128220 1129224 D TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: dvm:DvMF_2519 flagella basal body P-ring formation protein FlgA; flagella basal body P-ring formation protein FlgA 1128220..1129224 Desulfovibrio salexigens DSM 2638 8094354 YP_002990615.1 CDS flgH NC_012881.1 1129246 1129944 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 1129246..1129944 Desulfovibrio salexigens DSM 2638 8094355 YP_002990616.1 CDS flgI NC_012881.1 1130002 1131135 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1130002..1131135 Desulfovibrio salexigens DSM 2638 8094356 YP_002990617.1 CDS Desal_1013 NC_012881.1 1131343 1133760 D KEGG: dvu:DVU1169 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1131343..1133760 Desulfovibrio salexigens DSM 2638 8094357 YP_002990618.1 CDS Desal_1014 NC_012881.1 1134005 1134727 D KEGG: dde:Dde_3154 membrane proteins, metalloendopeptidase-like; membrane protein, metalloendopeptidase-like protein 1134005..1134727 Desulfovibrio salexigens DSM 2638 8094358 YP_002990619.1 CDS Desal_1015 NC_012881.1 1134805 1135284 D PFAM: FlgN family protein; KEGG: dvm:DvMF_2523 FlgN family protein; FlgN family protein 1134805..1135284 Desulfovibrio salexigens DSM 2638 8094359 YP_002990620.1 CDS Desal_1016 NC_012881.1 1135284 1137398 D TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: dvm:DvMF_2524 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 1135284..1137398 Desulfovibrio salexigens DSM 2638 8094360 YP_002990621.1 CDS Desal_1017 NC_012881.1 1137426 1139000 D TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: dde:Dde_3151 flagellar hook-associated protein FlgL; flagellar hook-associated protein 3 1137426..1139000 Desulfovibrio salexigens DSM 2638 8094361 YP_002990622.1 CDS Desal_1018 NC_012881.1 1139150 1139389 D TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: dde:Dde_3150 carbon storage regulator; carbon storage regulator CsrA 1139150..1139389 Desulfovibrio salexigens DSM 2638 8094362 YP_002990623.1 CDS Desal_1019 NC_012881.1 1139365 1139817 D binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 1139365..1139817 Desulfovibrio salexigens DSM 2638 8094363 YP_002990624.1 CDS Desal_1020 NC_012881.1 1139980 1140279 R PFAM: anti-sigma-28 factor FlgM family protein; KEGG: dds:Ddes_2005 anti-sigma-28 factor, FlgM; anti-sigma-28 factor FlgM family protein complement(1139980..1140279) Desulfovibrio salexigens DSM 2638 8094364 YP_002990625.1 CDS Desal_1021 NC_012881.1 1140338 1140754 R KEGG: dde:Dde_0639 hypothetical protein; hypothetical protein complement(1140338..1140754) Desulfovibrio salexigens DSM 2638 8094365 YP_002990626.1 CDS Desal_1022 NC_012881.1 1140989 1141840 D PFAM: ATP-NAD/AcoX kinase; KEGG: dvm:DvMF_0581 ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 1140989..1141840 Desulfovibrio salexigens DSM 2638 8094366 YP_002990627.1 CDS Desal_1023 NC_012881.1 1141848 1143593 D KEGG: dde:Dde_2617 hypothetical protein; hypothetical protein 1141848..1143593 Desulfovibrio salexigens DSM 2638 8094367 YP_002990628.1 CDS Desal_1024 NC_012881.1 1143600 1144880 D PFAM: MltA domain protein; 3D domain protein; KEGG: dvl:Dvul_2097 MltA domain-containing protein; MltA domain-containing protein 1143600..1144880 Desulfovibrio salexigens DSM 2638 8094368 YP_002990629.1 CDS Desal_1025 NC_012881.1 1145154 1146596 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB/Yqey domain protein; GatB central domain protein; KEGG: dde:Dde_2615 aspartyl/glutamyl-tRNA amidotransferase subunit B; glutamyl-tRNA(Gln) amidotransferase subunit B 1145154..1146596 Desulfovibrio salexigens DSM 2638 8094369 YP_002990630.1 CDS Desal_1026 NC_012881.1 1146616 1147656 D KEGG: dvm:DvMF_2235 translation initiation factor, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 1146616..1147656 Desulfovibrio salexigens DSM 2638 8094370 YP_002990631.1 CDS Desal_1027 NC_012881.1 1147877 1148740 D hypothetical protein 1147877..1148740 Desulfovibrio salexigens DSM 2638 8094371 YP_002990632.1 CDS Desal_1028 NC_012881.1 1148797 1149495 D hypothetical protein 1148797..1149495 Desulfovibrio salexigens DSM 2638 8094372 YP_002990633.1 CDS engA NC_012881.1 1149653 1151005 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1149653..1151005 Desulfovibrio salexigens DSM 2638 8094373 YP_002990634.1 CDS Desal_1030 NC_012881.1 1151390 1152046 D PFAM: response regulator receiver; regulatory protein LuxR; sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: dde:Dde_0977 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 1151390..1152046 Desulfovibrio salexigens DSM 2638 8094375 YP_002990635.1 CDS Desal_1031 NC_012881.1 1152621 1153640 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: asa:ASA_2363 hypothetical protein; hypothetical protein 1152621..1153640 Desulfovibrio salexigens DSM 2638 8094377 YP_002990636.1 CDS Desal_1032 NC_012881.1 1153741 1154277 R KEGG: pat:Patl_3556 hypothetical protein; hypothetical protein complement(1153741..1154277) Desulfovibrio salexigens DSM 2638 8094378 YP_002990637.1 CDS Desal_1033 NC_012881.1 1154480 1157152 R PFAM: sulfatase; KEGG: pat:Patl_0891 sulfatase; sulfatase complement(1154480..1157152) Desulfovibrio salexigens DSM 2638 8094379 YP_002990638.1 CDS Desal_1034 NC_012881.1 1157175 1157888 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: abu:Abu_2327 methyltransferase; methyltransferase type 11 complement(1157175..1157888) Desulfovibrio salexigens DSM 2638 8094380 YP_002990639.1 CDS Desal_1035 NC_012881.1 1157902 1159731 R PFAM: aminotransferase class I and II; KEGG: plu:plu1412 hypothetical protein; class I and II aminotransferase complement(1157902..1159731) Desulfovibrio salexigens DSM 2638 8094381 YP_002990640.1 CDS Desal_1036 NC_012881.1 1159951 1160409 D PFAM: protein of unknown function DUF107; KEGG: dps:DP1870 hypothetical protein; hypothetical protein 1159951..1160409 Desulfovibrio salexigens DSM 2638 8094382 YP_002990641.1 CDS Desal_1037 NC_012881.1 1160426 1161409 D PFAM: band 7 protein; SMART: band 7 protein; KEGG: dps:DP1869 hypothetical protein; hypothetical protein 1160426..1161409 Desulfovibrio salexigens DSM 2638 8094383 YP_002990642.1 CDS Desal_1038 NC_012881.1 1161495 1161704 R KEGG: dvm:DvMF_3150 hypothetical protein; hypothetical protein complement(1161495..1161704) Desulfovibrio salexigens DSM 2638 8094384 YP_002990643.1 CDS mazG NC_012881.1 1161900 1162667 R functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase complement(1161900..1162667) Desulfovibrio salexigens DSM 2638 8094385 YP_002990644.1 CDS Desal_1040 NC_012881.1 1162668 1163228 R PFAM: colicin V production protein; KEGG: dal:Dalk_3649 colicin V production protein; colicin V production protein complement(1162668..1163228) Desulfovibrio salexigens DSM 2638 8094386 YP_002990645.1 CDS Desal_1041 NC_012881.1 1163487 1164038 D KEGG: dde:Dde_2930 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1163487..1164038 Desulfovibrio salexigens DSM 2638 8094387 YP_002990646.1 CDS Desal_1042 NC_012881.1 1164231 1164782 D KEGG: dvm:DvMF_2690 hypothetical protein; hypothetical protein 1164231..1164782 Desulfovibrio salexigens DSM 2638 8094388 YP_002990647.1 CDS Desal_1043 NC_012881.1 1164796 1166865 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dvl:Dvul_2269 molybdopterin oxidoreductase; molybdopterin oxidoreductase 1164796..1166865 Desulfovibrio salexigens DSM 2638 8094389 YP_002990648.1 CDS Desal_1044 NC_012881.1 1166889 1167671 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvm:DvMF_2688 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1166889..1167671 Desulfovibrio salexigens DSM 2638 8094390 YP_002990649.1 CDS Desal_1045 NC_012881.1 1167686 1168918 D PFAM: polysulphide reductase NrfD; KEGG: dde:Dde_2935 molybdopterin oxidoreductase, transmembrane subunit; polysulfide reductase NrfD 1167686..1168918 Desulfovibrio salexigens DSM 2638 8094391 YP_002990650.1 CDS Desal_1046 NC_012881.1 1169331 1169933 R KEGG: sfu:Sfum_3128 hypothetical protein; hypothetical protein complement(1169331..1169933) Desulfovibrio salexigens DSM 2638 8094392 YP_002990651.1 CDS Desal_1047 NC_012881.1 1169959 1170456 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: sfu:Sfum_4030 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator complement(1169959..1170456) Desulfovibrio salexigens DSM 2638 8094393 YP_002990652.1 CDS Desal_1049 NC_012881.1 1173082 1173531 D KEGG: sfu:Sfum_4032 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 1173082..1173531 Desulfovibrio salexigens DSM 2638 8094395 YP_002990653.1 CDS Desal_1050 NC_012881.1 1173636 1173974 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sfu:Sfum_4033 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1173636..1173974 Desulfovibrio salexigens DSM 2638 8094396 YP_002990654.1 CDS Desal_1051 NC_012881.1 1174132 1175475 D KEGG: dps:DP2061 hypothetical protein; hypothetical protein 1174132..1175475 Desulfovibrio salexigens DSM 2638 8094397 YP_002990655.1 CDS Desal_1052 NC_012881.1 1175581 1175871 D hypothetical protein 1175581..1175871 Desulfovibrio salexigens DSM 2638 8094398 YP_002990656.1 CDS Desal_1053 NC_012881.1 1175961 1176914 D KEGG: sse:Ssed_1051 hypothetical protein; hypothetical protein 1175961..1176914 Desulfovibrio salexigens DSM 2638 8094228 YP_002990657.1 CDS Desal_1054 NC_012881.1 1177042 1179546 R PFAM: MscS Mechanosensitive ion channel; KEGG: dvm:DvMF_2529 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS complement(1177042..1179546) Desulfovibrio salexigens DSM 2638 8094229 YP_002990658.1 CDS Desal_1055 NC_012881.1 1179821 1180351 D PFAM: shikimate kinase; KEGG: pmr:PMI0371 shikimate kinase; shikimate kinase 1179821..1180351 Desulfovibrio salexigens DSM 2638 8094230 YP_002990659.1 CDS Desal_1056 NC_012881.1 1180353 1181405 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1180353..1181405 Desulfovibrio salexigens DSM 2638 8094231 YP_002990660.1 CDS Desal_1057 NC_012881.1 1181444 1182208 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: hap:HAPS_0667 possible SAM-dependent methyltransferase; methyltransferase type 11 complement(1181444..1182208) Desulfovibrio salexigens DSM 2638 8094232 YP_002990661.1 CDS Desal_1058 NC_012881.1 1182420 1183343 R PFAM: radical SAM domain protein; KEGG: dvl:Dvul_2787 radical SAM domain-containing protein; radical SAM domain protein complement(1182420..1183343) Desulfovibrio salexigens DSM 2638 8094233 YP_002990662.1 CDS Desal_1059 NC_012881.1 1183455 1183748 D PFAM: protein of unknown function DUF77; KEGG: dvm:DvMF_3112 protein of unknown function DUF77; hypothetical protein 1183455..1183748 Desulfovibrio salexigens DSM 2638 8094234 YP_002990663.1 CDS Desal_1060 NC_012881.1 1183771 1184262 D KEGG: dvm:DvMF_0973 lipoprotein; lipoprotein 1183771..1184262 Desulfovibrio salexigens DSM 2638 8094235 YP_002990664.1 CDS Desal_1061 NC_012881.1 1184264 1185010 R PFAM: ApbE family lipoprotein; KEGG: dvm:DvMF_0044 hypothetical protein; hypothetical protein complement(1184264..1185010) Desulfovibrio salexigens DSM 2638 8094236 YP_002990665.1 CDS Desal_1062 NC_012881.1 1185150 1185800 R PFAM: protein of unknown function DUF1121; KEGG: sfu:Sfum_0236 protein of unknown function DUF1121; hypothetical protein complement(1185150..1185800) Desulfovibrio salexigens DSM 2638 8094237 YP_002990666.1 CDS Desal_1063 NC_012881.1 1186176 1186310 D TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: nam:NAMH_0839 ribosomal protein L34; 50S ribosomal protein L34 1186176..1186310 Desulfovibrio salexigens DSM 2638 8094238 YP_002990667.1 CDS Desal_1064 NC_012881.1 1186298 1186672 D TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: dvm:DvMF_0890 ribonuclease P protein component; ribonuclease P protein component 1186298..1186672 Desulfovibrio salexigens DSM 2638 8094239 YP_002990668.1 CDS Desal_1065 NC_012881.1 1186687 1186935 D PFAM: protein of unknown function DUF37; KEGG: dde:Dde_2395 hypothetical protein; hypothetical protein 1186687..1186935 Desulfovibrio salexigens DSM 2638 8094240 YP_002990669.1 CDS Desal_1066 NC_012881.1 1186966 1188585 D PFAM: hypothetical protein; KEGG: dvm:DvMF_0888 hypothetical protein; hypothetical protein 1186966..1188585 Desulfovibrio salexigens DSM 2638 8094241 YP_002990670.1 CDS Desal_1067 NC_012881.1 1188638 1190128 D PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: dde:Dde_2393 single-stranded nucleic acid binding R3H; single-stranded nucleic acid binding R3H domain-containing protein 1188638..1190128 Desulfovibrio salexigens DSM 2638 8094242 YP_002990671.1 CDS trmE NC_012881.1 1190149 1191600 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1190149..1191600 Desulfovibrio salexigens DSM 2638 8094243 YP_002990672.1 CDS Desal_1069 NC_012881.1 1191602 1191859 D hypothetical protein 1191602..1191859 Desulfovibrio salexigens DSM 2638 8094244 YP_002990673.1 CDS Desal_1070 NC_012881.1 1191917 1192576 R KEGG: dde:Dde_2624 hypothetical protein; hypothetical protein complement(1191917..1192576) Desulfovibrio salexigens DSM 2638 8094245 YP_002990674.1 CDS Desal_1071 NC_012881.1 1192579 1193280 R PFAM: glycosyl transferase family 2; KEGG: dvu:DVU1892 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase complement(1192579..1193280) Desulfovibrio salexigens DSM 2638 8094246 YP_002990675.1 CDS Desal_1072 NC_012881.1 1193392 1193742 R PFAM: zinc finger DksA/TraR C4-type; KEGG: dvl:Dvul_2922 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator complement(1193392..1193742) Desulfovibrio salexigens DSM 2638 8094247 YP_002990676.1 CDS Desal_1073 NC_012881.1 1193944 1194642 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: ppr:PBPRB1138 methyltransferase; methyltransferase type 11 complement(1193944..1194642) Desulfovibrio salexigens DSM 2638 8094248 YP_002990677.1 CDS Desal_1074 NC_012881.1 1194732 1196243 R KEGG: sfu:Sfum_3452 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase complement(1194732..1196243) Desulfovibrio salexigens DSM 2638 8094249 YP_002990678.1 CDS Desal_1075 NC_012881.1 1196345 1198138 R PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; KEGG: sfu:Sfum_2349 malto-oligosyltrehalose trehalohydrolase; alpha amylase complement(1196345..1198138) Desulfovibrio salexigens DSM 2638 8094250 YP_002990679.1 CDS Desal_1076 NC_012881.1 1198265 1198615 D hypothetical protein 1198265..1198615 Desulfovibrio salexigens DSM 2638 8094251 YP_002990680.1 CDS Desal_1077 NC_012881.1 1198804 1200672 D KEGG: pca:Pcar_2307 hemolysin; hemolysin 1198804..1200672 Desulfovibrio salexigens DSM 2638 8094252 YP_002990681.1 CDS Desal_1078 NC_012881.1 1200850 1201866 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dvm:DvMF_0572 threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase complement(1200850..1201866) Desulfovibrio salexigens DSM 2638 8094253 YP_002990682.1 CDS Desal_1079 NC_012881.1 1201952 1202530 R PFAM: lipolytic protein G-D-S-L family; KEGG: bid:Bind_1722 GDSL family lipase; G-D-S-L family lipolytic protein complement(1201952..1202530) Desulfovibrio salexigens DSM 2638 8094254 YP_002990683.1 CDS Desal_1080 NC_012881.1 1202734 1203555 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sfu:Sfum_2734 ABC transporter; ABC transporter 1202734..1203555 Desulfovibrio salexigens DSM 2638 8094255 YP_002990684.1 CDS Desal_1081 NC_012881.1 1203548 1204357 D PFAM: ABC transporter; KEGG: dde:Dde_2210 cation ABC transporter permease protein; ABC transporter 1203548..1204357 Desulfovibrio salexigens DSM 2638 8093011 YP_002990685.1 CDS Desal_1082 NC_012881.1 1204402 1206273 R TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: pat:Patl_1194 asparagine synthase (glutamine-hydrolyzing); asparagine synthase complement(1204402..1206273) Desulfovibrio salexigens DSM 2638 8092011 YP_002990686.1 CDS Desal_1083 NC_012881.1 1206419 1208827 R KEGG: dde:Dde_2411 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(1206419..1208827) Desulfovibrio salexigens DSM 2638 8092012 YP_002990687.1 CDS Desal_1084 NC_012881.1 1208965 1209393 R hypothetical protein complement(1208965..1209393) Desulfovibrio salexigens DSM 2638 8092013 YP_002990688.1 CDS Desal_1085 NC_012881.1 1209466 1209744 D hypothetical protein 1209466..1209744 Desulfovibrio salexigens DSM 2638 8092014 YP_002990689.1 CDS Desal_1086 NC_012881.1 1209748 1210371 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vsp:VS_1290 hypothetical protein; lysine exporter protein LysE/YggA complement(1209748..1210371) Desulfovibrio salexigens DSM 2638 8092015 YP_002990690.1 CDS Desal_1087 NC_012881.1 1210385 1210798 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gsu:GSU1286 chemotaxis protein CheY; response regulator receiver protein complement(1210385..1210798) Desulfovibrio salexigens DSM 2638 8092016 YP_002990691.1 CDS Desal_1088 NC_012881.1 1210828 1211445 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(1210828..1211445) Desulfovibrio salexigens DSM 2638 8092017 YP_002990692.1 CDS Desal_1089 NC_012881.1 1211606 1212727 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: dde:Dde_2559 beta-N-acetylhexosaminidase; glycoside hydrolase family 3 1211606..1212727 Desulfovibrio salexigens DSM 2638 8092018 YP_002990693.1 CDS Desal_1090 NC_012881.1 1212807 1215473 R KEGG: dvm:DvMF_2249 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein; signal transduction histidine kinase, nitrogen specific, NtrB complement(1212807..1215473) Desulfovibrio salexigens DSM 2638 8092019 YP_002990694.1 CDS Desal_1091 NC_012881.1 1216101 1216976 D PFAM: flagellin domain protein; KEGG: dvm:DvMF_2950 flagellin domain protein; flagellin domain-containing protein 1216101..1216976 Desulfovibrio salexigens DSM 2638 8092020 YP_002990695.1 CDS Desal_1092 NC_012881.1 1216996 1217211 R hypothetical protein complement(1216996..1217211) Desulfovibrio salexigens DSM 2638 8092021 YP_002990696.1 CDS Desal_1093 NC_012881.1 1217346 1218509 D PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: dvu:DVU0477 isocitrate dehydrogenase, NADP-dependent; isocitrate dehydrogenase (NADP(+)) 1217346..1218509 Desulfovibrio salexigens DSM 2638 8092022 YP_002990697.1 CDS Desal_1094 NC_012881.1 1218621 1218956 R hypothetical protein complement(1218621..1218956) Desulfovibrio salexigens DSM 2638 8092023 YP_002990698.1 CDS Desal_1095 NC_012881.1 1219192 1220247 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dde:Dde_3628 secretion protein HlyD; RND family efflux transporter MFP subunit 1219192..1220247 Desulfovibrio salexigens DSM 2638 8092024 YP_002990699.1 CDS Desal_1096 NC_012881.1 1220269 1223385 D PFAM: acriflavin resistance protein; KEGG: dde:Dde_2381 acriflavin resistance protein D; acriflavin resistance protein 1220269..1223385 Desulfovibrio salexigens DSM 2638 8092025 YP_002990700.1 CDS Desal_1097 NC_012881.1 1223471 1224631 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(1223471..1224631) Desulfovibrio salexigens DSM 2638 8092026 YP_002990701.1 CDS Desal_1098 NC_012881.1 1224855 1225406 D PFAM: glutamine amidotransferase class-I; KEGG: dvl:Dvul_2620 glutamine amidotransferase class-I; glutamine amidotransferase 1224855..1225406 Desulfovibrio salexigens DSM 2638 8092027 YP_002990702.1 CDS Desal_1099 NC_012881.1 1225372 1226661 D PFAM: Chorismate binding-like; KEGG: dde:Dde_3618 aminodeoxychorismate synthase, subunit I; anthranilate synthase 1225372..1226661 Desulfovibrio salexigens DSM 2638 8092028 YP_002990703.1 CDS Desal_1100 NC_012881.1 1226658 1227428 D PFAM: aminotransferase class IV; KEGG: dvm:DvMF_2314 aminotransferase class IV; class IV aminotransferase 1226658..1227428 Desulfovibrio salexigens DSM 2638 8092029 YP_002990704.1 CDS Desal_1101 NC_012881.1 1227541 1228230 D PFAM: type IV pilus assembly PilZ; KEGG: dvl:Dvul_0573 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1227541..1228230 Desulfovibrio salexigens DSM 2638 8092030 YP_002990705.1 CDS Desal_1102 NC_012881.1 1228274 1229545 R PFAM: phosphatidylserine decarboxylase-related; KEGG: dal:Dalk_1091 phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase complement(1228274..1229545) Desulfovibrio salexigens DSM 2638 8092031 YP_002990706.1 CDS Desal_1103 NC_012881.1 1229717 1230736 R PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_2329 glycosyl transferase family 2; family 2 glycosyl transferase complement(1229717..1230736) Desulfovibrio salexigens DSM 2638 8092032 YP_002990707.1 CDS Desal_1104 NC_012881.1 1230740 1231672 R PFAM: PP-loop domain protein; KEGG: dde:Dde_3611 hypothetical protein; PP-loop domain-containing protein complement(1230740..1231672) Desulfovibrio salexigens DSM 2638 8092033 YP_002990708.1 CDS Desal_1105 NC_012881.1 1231677 1231874 R KEGG: dde:Dde_3610 hypothetical protein; hypothetical protein complement(1231677..1231874) Desulfovibrio salexigens DSM 2638 8092034 YP_002990709.1 CDS Desal_1106 NC_012881.1 1232194 1232553 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dde:Dde_3609 response regulator receiver domain-containing protein; response regulator receiver protein 1232194..1232553 Desulfovibrio salexigens DSM 2638 8092035 YP_002990710.1 CDS Desal_1107 NC_012881.1 1232827 1233465 D PFAM: peptidase M50; KEGG: dps:DP0062 hypothetical protein; peptidase M50 1232827..1233465 Desulfovibrio salexigens DSM 2638 8092037 YP_002990711.1 CDS Desal_1108 NC_012881.1 1233493 1234488 D KEGG: dvl:Dvul_2825 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 1233493..1234488 Desulfovibrio salexigens DSM 2638 8092038 YP_002990712.1 CDS Desal_1109 NC_012881.1 1234640 1234795 R KEGG: dvu:DVU2006 hypothetical protein; hypothetical protein complement(1234640..1234795) Desulfovibrio salexigens DSM 2638 8092039 YP_002990713.1 CDS Desal_1110 NC_012881.1 1234808 1235344 R hypothetical protein complement(1234808..1235344) Desulfovibrio salexigens DSM 2638 8092040 YP_002990714.1 CDS Desal_1111 NC_012881.1 1235337 1235483 R hypothetical protein complement(1235337..1235483) Desulfovibrio salexigens DSM 2638 8092041 YP_002990715.1 CDS Desal_1112 NC_012881.1 1235515 1236741 R PFAM: permease; KEGG: dde:Dde_0132 permease; permease complement(1235515..1236741) Desulfovibrio salexigens DSM 2638 8092042 YP_002990716.1 CDS Desal_1113 NC_012881.1 1236742 1237128 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dde:Dde_0747 ArsR family transcriptional regulator; ArsR family transcriptional regulator complement(1236742..1237128) Desulfovibrio salexigens DSM 2638 8092043 YP_002990717.1 CDS Desal_1114 NC_012881.1 1237344 1237655 D KEGG: bba:Bd0301 hypothetical protein; hypothetical protein 1237344..1237655 Desulfovibrio salexigens DSM 2638 8092044 YP_002990718.1 CDS Desal_1116 NC_012881.1 1238306 1240804 R KEGG: gsu:GSU0007 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; PAS/PAC sensor hybrid histidine kinase complement(1238306..1240804) Desulfovibrio salexigens DSM 2638 8092046 YP_002990719.1 CDS Desal_1117 NC_012881.1 1240801 1242039 R PFAM: extracellular ligand-binding receptor; KEGG: dvm:DvMF_0210 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(1240801..1242039) Desulfovibrio salexigens DSM 2638 8092047 YP_002990720.1 CDS Desal_1118 NC_012881.1 1242102 1243868 R PFAM: GAF domain protein; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein; KEGG: dal:Dalk_4245 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(1242102..1243868) Desulfovibrio salexigens DSM 2638 8092048 YP_002990721.1 CDS Desal_1119 NC_012881.1 1243879 1244265 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sfu:Sfum_3017 response regulator receiver protein; response regulator receiver protein complement(1243879..1244265) Desulfovibrio salexigens DSM 2638 8092049 YP_002990722.1 CDS Desal_1120 NC_012881.1 1244515 1245582 D hypothetical protein 1244515..1245582 Desulfovibrio salexigens DSM 2638 8092050 YP_002990723.1 CDS Desal_1121 NC_012881.1 1245586 1246791 D PFAM: extracellular ligand-binding receptor; KEGG: dde:Dde_0712 lipoprotein; extracellular ligand-binding receptor 1245586..1246791 Desulfovibrio salexigens DSM 2638 8092051 YP_002990724.1 CDS Desal_1122 NC_012881.1 1246788 1248818 D KEGG: dde:Dde_0711 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 1246788..1248818 Desulfovibrio salexigens DSM 2638 8092052 YP_002990725.1 CDS Desal_1123 NC_012881.1 1248858 1249571 D PFAM: response regulator receiver; Sulfate transporter/antisigma-factor antagonist STAS; SMART: response regulator receiver; KEGG: dvl:Dvul_2371 response regulator receiver protein; anti-sigma-factor antagonist 1248858..1249571 Desulfovibrio salexigens DSM 2638 8092053 YP_002990726.1 CDS Desal_1124 NC_012881.1 1249669 1250697 R PFAM: aminodeoxychorismate lyase; KEGG: dde:Dde_0315 aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(1249669..1250697) Desulfovibrio salexigens DSM 2638 8092054 YP_002990727.1 CDS Desal_1125 NC_012881.1 1250712 1251119 R PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: dde:Dde_0314 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF complement(1250712..1251119) Desulfovibrio salexigens DSM 2638 8092055 YP_002990728.1 CDS Desal_1126 NC_012881.1 1251214 1254756 R PFAM: FAD linked oxidase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dvm:DvMF_2353 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein complement(1251214..1254756) Desulfovibrio salexigens DSM 2638 8092056 YP_002990729.1 CDS Desal_1127 NC_012881.1 1255230 1256369 D PFAM: aminotransferase class V; KEGG: glo:Glov_3345 alanine--glyoxylate transaminase; class V aminotransferase 1255230..1256369 Desulfovibrio salexigens DSM 2638 8092057 YP_002990730.1 CDS Desal_1128 NC_012881.1 1256561 1257007 D KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein 1256561..1257007 Desulfovibrio salexigens DSM 2638 8092058 YP_002990731.1 CDS Desal_1129 NC_012881.1 1257214 1257972 D KEGG: sbp:Sbal223_0684 hypothetical protein; hypothetical protein 1257214..1257972 Desulfovibrio salexigens DSM 2638 8092059 YP_002990732.1 CDS Desal_1130 NC_012881.1 1258312 1258905 D PFAM: regulatory protein TetR; KEGG: dat:HRM2_40370 HTH-type transcriptional regulator (MtrR family protein); TetR family transcriptional regulator 1258312..1258905 Desulfovibrio salexigens DSM 2638 8092060 YP_002990733.1 CDS Desal_1131 NC_012881.1 1258919 1261054 D TIGRFAM: sulfate transporter; PFAM: sulfate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dde:Dde_3641 sulfate permease; sulfate transporter 1258919..1261054 Desulfovibrio salexigens DSM 2638 8092061 YP_002990734.1 CDS Desal_1132 NC_012881.1 1261067 1262281 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dat:HRM2_40350 response regulator receiver domain protein; response regulator receiver protein 1261067..1262281 Desulfovibrio salexigens DSM 2638 8092062 YP_002990735.1 CDS Desal_1133 NC_012881.1 1262306 1264045 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dat:HRM2_40340 periplasmic sensor signal transduction histidine kinase; histidine kinase 1262306..1264045 Desulfovibrio salexigens DSM 2638 8092063 YP_002990736.1 CDS Desal_1134 NC_012881.1 1264049 1264405 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dat:HRM2_40330 two-component sensory box histidine kinase/response regulator; response regulator receiver protein 1264049..1264405 Desulfovibrio salexigens DSM 2638 8092064 YP_002990737.1 CDS Desal_1135 NC_012881.1 1264426 1265058 D KEGG: dol:Dole_2332 histidine kinase A domain-containing protein; hypothetical protein 1264426..1265058 Desulfovibrio salexigens DSM 2638 8092065 YP_002990738.1 CDS Desal_1136 NC_012881.1 1265095 1265523 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dat:HRM2_40310 sigma-54 dependent two component transcriptional regulator (fis family protein); response regulator receiver protein 1265095..1265523 Desulfovibrio salexigens DSM 2638 8092066 YP_002990739.1 CDS Desal_1137 NC_012881.1 1265777 1268179 D PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: dvm:DvMF_1118 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1265777..1268179 Desulfovibrio salexigens DSM 2638 8092067 YP_002990740.1 CDS Desal_1138 NC_012881.1 1268242 1269372 R PFAM: ATPase; KEGG: gur:Gura_0746 hypothetical protein; ATPase complement(1268242..1269372) Desulfovibrio salexigens DSM 2638 8092068 YP_002990741.1 CDS Desal_1139 NC_012881.1 1269473 1271815 R TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; KEGG: dvl:Dvul_0310 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF complement(1269473..1271815) Desulfovibrio salexigens DSM 2638 8092069 YP_002990742.1 CDS Desal_1140 NC_012881.1 1271921 1272853 R PFAM: protein of unknown function DUF362; KEGG: dvm:DvMF_1870 protein of unknown function DUF362; hypothetical protein complement(1271921..1272853) Desulfovibrio salexigens DSM 2638 8092070 YP_002990743.1 CDS Desal_1141 NC_012881.1 1272843 1274186 R KEGG: bbr:BB4378 histone protein; hypothetical protein complement(1272843..1274186) Desulfovibrio salexigens DSM 2638 8092071 YP_002990744.1 CDS Desal_1142 NC_012881.1 1274183 1275652 R PFAM: protein of unknown function DUF81; KEGG: dds:Ddes_0357 protein of unknown function DUF81; hypothetical protein complement(1274183..1275652) Desulfovibrio salexigens DSM 2638 8092072 YP_002990745.1 CDS Desal_1143 NC_012881.1 1275854 1277338 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ade:Adeh_3385 ABC transporter ATPase subunit; ABC transporter 1275854..1277338 Desulfovibrio salexigens DSM 2638 8092073 YP_002990746.1 CDS Desal_1144 NC_012881.1 1277369 1277632 R hypothetical protein complement(1277369..1277632) Desulfovibrio salexigens DSM 2638 8092074 YP_002990747.1 CDS Desal_1145 NC_012881.1 1277646 1278401 R TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: ilo:IL0573 3'-phosphoadenosine 5'-phosphosulfate (PapS) 3'-phosphatase; 3'(2'),5'-bisphosphate nucleotidase complement(1277646..1278401) Desulfovibrio salexigens DSM 2638 8092075 YP_002990748.1 CDS Desal_1146 NC_012881.1 1278514 1279356 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: dde:Dde_2459 ThiF protein; UBA/THIF-type NAD/FAD binding protein 1278514..1279356 Desulfovibrio salexigens DSM 2638 8092076 YP_002990749.1 CDS Desal_1147 NC_012881.1 1279874 1280104 D hypothetical protein 1279874..1280104 Desulfovibrio salexigens DSM 2638 8092077 YP_002990750.1 CDS Desal_1148 NC_012881.1 1280241 1281434 D PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: dde:Dde_1723 response regulator receiver (CheY-like) modulated serine phosphatase; response regulator receiver protein 1280241..1281434 Desulfovibrio salexigens DSM 2638 8092078 YP_002990751.1 CDS Desal_1149 NC_012881.1 1281440 1282294 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: sse:Ssed_2229 GGDEF domain-containing protein; family 3 extracellular solute-binding protein complement(1281440..1282294) Desulfovibrio salexigens DSM 2638 8092079 YP_002990752.1 CDS Desal_1150 NC_012881.1 1282445 1283758 R KEGG: dde:Dde_0350 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: ATPase AAA; FliI/YscN family ATPase complement(1282445..1283758) Desulfovibrio salexigens DSM 2638 8092080 YP_002990753.1 CDS Desal_1151 NC_012881.1 1283761 1284498 R KEGG: dvu:DVU0311 flagellar assembly protein FliH; flagellar assembly protein FliH complement(1283761..1284498) Desulfovibrio salexigens DSM 2638 8092081 YP_002990754.1 CDS Desal_1152 NC_012881.1 1284485 1285486 R TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: dvm:DvMF_2288 flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(1284485..1285486) Desulfovibrio salexigens DSM 2638 8092082 YP_002990755.1 CDS Desal_1153 NC_012881.1 1285488 1287092 R TIGRFAM: flagellar M-ring protein FliF; PFAM: Flagellar M-ring domain protein; secretory protein YscJ/FliF family protein; KEGG: dvu:DVU0313 flagellar M-ring protein FliF; flagellar M-ring protein FliF complement(1285488..1287092) Desulfovibrio salexigens DSM 2638 8092083 YP_002990756.1 CDS Desal_1154 NC_012881.1 1287329 1287655 R TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: dvl:Dvul_2667 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE complement(1287329..1287655) Desulfovibrio salexigens DSM 2638 8092084 YP_002990757.1 CDS Desal_1155 NC_012881.1 1287709 1288152 R TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: dvl:Dvul_2666 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC complement(1287709..1288152) Desulfovibrio salexigens DSM 2638 8092085 YP_002990758.1 CDS flgB NC_012881.1 1288152 1288562 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB complement(1288152..1288562) Desulfovibrio salexigens DSM 2638 8091787 YP_002990759.1 CDS Desal_1157 NC_012881.1 1288882 1289436 D PFAM: TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dde:Dde_0357 TPR repeat-containing protein; hypothetical protein 1288882..1289436 Desulfovibrio salexigens DSM 2638 8092555 YP_002990760.1 CDS Desal_1158 NC_012881.1 1289607 1290206 D PFAM: MGS domain protein; KEGG: dde:Dde_0377 phosphoribosylaminoimidazolecarboxamide formyltransferase; IMP cyclohydrolase 1289607..1290206 Desulfovibrio salexigens DSM 2638 8092556 YP_002990761.1 CDS Desal_1159 NC_012881.1 1290498 1292093 D TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: dvm:DvMF_1947 GTP-binding protein HflX; GTP-binding proten HflX 1290498..1292093 Desulfovibrio salexigens DSM 2638 8092557 YP_002990762.1 CDS Desal_1160 NC_012881.1 1292211 1292429 D KEGG: dvm:DvMF_2132 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; SMART: RNA binding S1 domain protein; translation initiation factor IF-1 1292211..1292429 Desulfovibrio salexigens DSM 2638 8092558 YP_002990763.1 CDS Desal_1161 NC_012881.1 1292474 1292683 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: dol:Dole_3065 cold-shock DNA-binding domain-containing protein; cold-shock protein 1292474..1292683 Desulfovibrio salexigens DSM 2638 8092559 YP_002990764.1 CDS Desal_1162 NC_012881.1 1292811 1293137 R KEGG: dvm:DvMF_2794 hypothetical protein; hypothetical protein complement(1292811..1293137) Desulfovibrio salexigens DSM 2638 8092560 YP_002990765.1 CDS Desal_1163 NC_012881.1 1293283 1294233 R PFAM: CheW domain protein; response regulator receiver; SMART: response regulator receiver; CheW domain protein; KEGG: dde:Dde_3068 CheW protein; response regulator receiver modulated CheW protein complement(1293283..1294233) Desulfovibrio salexigens DSM 2638 8092561 YP_002990766.1 CDS Desal_1164 NC_012881.1 1294423 1294788 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dal:Dalk_3922 response regulator receiver protein; response regulator receiver protein 1294423..1294788 Desulfovibrio salexigens DSM 2638 8092562 YP_002990767.1 CDS Desal_1165 NC_012881.1 1294992 1296086 D PFAM: hydrogenase formation HypD protein; KEGG: dde:Dde_0364 hydrogenase expression/formation protein HypD; hydrogenase formation HypD protein 1294992..1296086 Desulfovibrio salexigens DSM 2638 8092563 YP_002990768.1 CDS Desal_1166 NC_012881.1 1296088 1297095 D TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: dde:Dde_0363 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 1296088..1297095 Desulfovibrio salexigens DSM 2638 8092564 YP_002990769.1 CDS Desal_1167 NC_012881.1 1297220 1298470 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: dvm:DvMF_1754 diguanylate phosphodiesterase; diguanylate phosphodiesterase 1297220..1298470 Desulfovibrio salexigens DSM 2638 8092565 YP_002990770.1 CDS Desal_1168 NC_012881.1 1298467 1300239 R PFAM: chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dde:Dde_0310 CBS; chloride channel core complement(1298467..1300239) Desulfovibrio salexigens DSM 2638 8092566 YP_002990771.1 CDS Desal_1169 NC_012881.1 1300257 1301204 R PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: dvm:DvMF_2021 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein complement(1300257..1301204) Desulfovibrio salexigens DSM 2638 8092567 YP_002990772.1 CDS Desal_1170 NC_012881.1 1301306 1302277 R PFAM: dihydrouridine synthase DuS; KEGG: dvm:DvMF_2019 dihydrouridine synthase DuS; dihydrouridine synthase DuS complement(1301306..1302277) Desulfovibrio salexigens DSM 2638 8092568 YP_002990773.1 CDS Desal_1171 NC_012881.1 1303108 1304301 D TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_2989 elongation factor Tu; translation elongation factor Tu 1303108..1304301 Desulfovibrio salexigens DSM 2638 8092573 YP_002990774.1 CDS rpmG NC_012881.1 1304305 1304454 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1304305..1304454 Desulfovibrio salexigens DSM 2638 8092574 YP_002990775.1 CDS Desal_1173 NC_012881.1 1304567 1304818 D TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: dde:Dde_2990 preprotein translocase subunit SecE; Preprotein translocase subunit SecE 1304567..1304818 Desulfovibrio salexigens DSM 2638 8092576 YP_002990776.1 CDS Desal_1174 NC_012881.1 1304846 1305406 D KEGG: dvm:DvMF_1450 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor 1304846..1305406 Desulfovibrio salexigens DSM 2638 8092577 YP_002990777.1 CDS Desal_1175 NC_012881.1 1305481 1305906 D KEGG: dvm:DvMF_1451 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 1305481..1305906 Desulfovibrio salexigens DSM 2638 8092578 YP_002990778.1 CDS rplA NC_012881.1 1305923 1306627 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1305923..1306627 Desulfovibrio salexigens DSM 2638 8092579 YP_002990779.1 CDS rplJ NC_012881.1 1306777 1307298 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1306777..1307298 Desulfovibrio salexigens DSM 2638 8092580 YP_002990780.1 CDS Desal_1178 NC_012881.1 1307346 1307735 D TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; KEGG: dde:Dde_2995 50S ribosomal protein L7/L12; 50S ribosomal protein L7/L12 1307346..1307735 Desulfovibrio salexigens DSM 2638 8092581 YP_002990781.1 CDS rpoB NC_012881.1 1308039 1312139 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1308039..1312139 Desulfovibrio salexigens DSM 2638 8092582 YP_002990782.1 CDS Desal_1180 NC_012881.1 1312203 1316360 D KEGG: dde:Dde_2998 DNA-directed RNA polymerase, acetylornithine deacetylase; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 1312203..1316360 Desulfovibrio salexigens DSM 2638 8092583 YP_002990783.1 CDS Desal_1181 NC_012881.1 1316517 1316888 D TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: dde:Dde_2263 30S ribosomal protein S12; 30S ribosomal protein S12 1316517..1316888 Desulfovibrio salexigens DSM 2638 8092584 YP_002990784.1 CDS Desal_1182 NC_012881.1 1316915 1317385 D TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: dvm:DvMF_0076 30S ribosomal protein S7; 30S ribosomal protein S7 1316915..1317385 Desulfovibrio salexigens DSM 2638 8092585 YP_002990785.1 CDS Desal_1183 NC_012881.1 1317398 1319464 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1317398..1319464 Desulfovibrio salexigens DSM 2638 8092586 YP_002990786.1 CDS rpsJ NC_012881.1 1319709 1320026 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1319709..1320026 Desulfovibrio salexigens DSM 2638 8092587 YP_002990787.1 CDS Desal_1185 NC_012881.1 1320041 1320673 D PFAM: ribosomal protein L3; KEGG: dvm:DvMF_0079 50S ribosomal protein L3; 50S ribosomal protein L3 1320041..1320673 Desulfovibrio salexigens DSM 2638 8092588 YP_002990788.1 CDS rplD NC_012881.1 1320686 1321306 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1320686..1321306 Desulfovibrio salexigens DSM 2638 8092589 YP_002990789.1 CDS rplW NC_012881.1 1321309 1321599 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1321309..1321599 Desulfovibrio salexigens DSM 2638 8092590 YP_002990790.1 CDS rplB NC_012881.1 1321603 1322433 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1321603..1322433 Desulfovibrio salexigens DSM 2638 8092591 YP_002990791.1 CDS Desal_1189 NC_012881.1 1322443 1322724 D TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: dde:Dde_2253 SSU ribosomal protein S19P; 30S ribosomal protein S19 1322443..1322724 Desulfovibrio salexigens DSM 2638 8092592 YP_002990792.1 CDS Desal_1190 NC_012881.1 1322738 1323070 D TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: dde:Dde_2252 50S ribosomal protein L22; 50S ribosomal protein L22 1322738..1323070 Desulfovibrio salexigens DSM 2638 8092593 YP_002990793.1 CDS rpsC NC_012881.1 1323080 1323721 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1323080..1323721 Desulfovibrio salexigens DSM 2638 8092594 YP_002990794.1 CDS rplP NC_012881.1 1323721 1324134 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1323721..1324134 Desulfovibrio salexigens DSM 2638 8092595 YP_002990795.1 CDS Desal_1193 NC_012881.1 1324136 1324330 D TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: dvl:Dvul_1757 50S ribosomal protein L29; 50S ribosomal protein L29 1324136..1324330 Desulfovibrio salexigens DSM 2638 8092596 YP_002990796.1 CDS rpsQ NC_012881.1 1324334 1324600 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1324334..1324600 Desulfovibrio salexigens DSM 2638 8092597 YP_002990797.1 CDS Desal_1195 NC_012881.1 1324612 1324980 D TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: dde:Dde_2247 50S ribosomal protein L14; 50S ribosomal protein L14 1324612..1324980 Desulfovibrio salexigens DSM 2638 8092598 YP_002990798.1 CDS rplX NC_012881.1 1325006 1325323 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1325006..1325323 Desulfovibrio salexigens DSM 2638 8092599 YP_002990799.1 CDS rplE NC_012881.1 1325333 1325872 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1325333..1325872 Desulfovibrio salexigens DSM 2638 8092600 YP_002990800.1 CDS Desal_1198 NC_012881.1 1325885 1326070 D PFAM: ribosomal protein S14; KEGG: dds:Ddes_0673 ribosomal protein S14; 30S ribosomal protein S14 1325885..1326070 Desulfovibrio salexigens DSM 2638 8092601 YP_002990801.1 CDS rpsH NC_012881.1 1326086 1326469 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1326086..1326469 Desulfovibrio salexigens DSM 2638 8092602 YP_002990802.1 CDS Desal_1200 NC_012881.1 1326482 1327018 D PFAM: ribosomal protein L6; KEGG: dvl:Dvul_1750 50S ribosomal protein L6; 50S ribosomal protein L6 1326482..1327018 Desulfovibrio salexigens DSM 2638 8092603 YP_002990803.1 CDS rplR NC_012881.1 1327031 1327390 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1327031..1327390 Desulfovibrio salexigens DSM 2638 8092604 YP_002990804.1 CDS rpsE NC_012881.1 1327407 1327898 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1327407..1327898 Desulfovibrio salexigens DSM 2638 8092605 YP_002990805.1 CDS rpmD NC_012881.1 1327911 1328084 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1327911..1328084 Desulfovibrio salexigens DSM 2638 8092606 YP_002990806.1 CDS rplO NC_012881.1 1328081 1328527 D late assembly protein; 50S ribosomal protein L15 1328081..1328527 Desulfovibrio salexigens DSM 2638 8092607 YP_002990807.1 CDS Desal_1205 NC_012881.1 1328531 1329841 D TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: dvm:DvMF_0099 preprotein translocase subunit SecY; preprotein translocase subunit SecY 1328531..1329841 Desulfovibrio salexigens DSM 2638 8092608 YP_002990808.1 CDS Desal_1206 NC_012881.1 1329847 1330614 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: dvm:DvMF_0100 methionine aminopeptidase, type I; methionine aminopeptidase 1329847..1330614 Desulfovibrio salexigens DSM 2638 8092609 YP_002990809.1 CDS rpmJ NC_012881.1 1330803 1330916 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 1330803..1330916 Desulfovibrio salexigens DSM 2638 8092610 YP_002990810.1 CDS rpsM NC_012881.1 1330929 1331300 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1330929..1331300 Desulfovibrio salexigens DSM 2638 8092611 YP_002990811.1 CDS Desal_1209 NC_012881.1 1331374 1331763 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1331374..1331763 Desulfovibrio salexigens DSM 2638 8092612 YP_002990812.1 CDS Desal_1210 NC_012881.1 1331783 1332409 D KEGG: dvl:Dvul_1740 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 1331783..1332409 Desulfovibrio salexigens DSM 2638 8092613 YP_002990813.1 CDS Desal_1211 NC_012881.1 1332423 1333463 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1332423..1333463 Desulfovibrio salexigens DSM 2638 8092614 YP_002990814.1 CDS Desal_1212 NC_012881.1 1333453 1333878 D TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dde:Dde_2230 50S ribosomal protein L17; 50S ribosomal protein L17 1333453..1333878 Desulfovibrio salexigens DSM 2638 8092615 YP_002990815.1 CDS Desal_1213 NC_012881.1 1333963 1334856 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dvm:DvMF_0108 transcriptional regulator, LysR family; LysR family transcriptional regulator 1333963..1334856 Desulfovibrio salexigens DSM 2638 8092616 YP_002990816.1 CDS Desal_1214 NC_012881.1 1334923 1335747 R PFAM: protein of unknown function DUF178; KEGG: dvl:Dvul_0549 hypothetical protein; hypothetical protein complement(1334923..1335747) Desulfovibrio salexigens DSM 2638 8092617 YP_002990817.1 CDS Desal_1215 NC_012881.1 1335740 1336837 R PFAM: radical SAM domain protein; KEGG: dde:Dde_0797 hypothetical protein; radical SAM domain protein complement(1335740..1336837) Desulfovibrio salexigens DSM 2638 8092618 YP_002990818.1 CDS Desal_1216 NC_012881.1 1336842 1337930 R PFAM: radical SAM domain protein; KEGG: dde:Dde_0798 hypothetical protein; radical SAM domain protein complement(1336842..1337930) Desulfovibrio salexigens DSM 2638 8092619 YP_002990819.1 CDS Desal_1217 NC_012881.1 1338022 1338870 D PFAM: protein of unknown function DUF191; KEGG: dde:Dde_0799 hypothetical protein; hypothetical protein 1338022..1338870 Desulfovibrio salexigens DSM 2638 8092620 YP_002990820.1 CDS Desal_1218 NC_012881.1 1339063 1339950 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: dde:Dde_0301 hypothetical protein; hypothetical protein complement(1339063..1339950) Desulfovibrio salexigens DSM 2638 8092621 YP_002990821.1 CDS Desal_1219 NC_012881.1 1340126 1340383 R KEGG: sfu:Sfum_1055 hypothetical protein; hypothetical protein complement(1340126..1340383) Desulfovibrio salexigens DSM 2638 8092622 YP_002990822.1 CDS Desal_1220 NC_012881.1 1340478 1340993 R PFAM: protein of unknown function DUF615; KEGG: pap:PSPA7_5087 hypothetical protein; hypothetical protein complement(1340478..1340993) Desulfovibrio salexigens DSM 2638 8092623 YP_002990823.1 CDS Desal_1221 NC_012881.1 1341270 1342151 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: dde:Dde_0530 hypothetical protein; hypothetical protein complement(1341270..1342151) Desulfovibrio salexigens DSM 2638 8092624 YP_002990824.1 CDS Desal_1222 NC_012881.1 1342153 1342590 R TIGRFAM: C_GCAxxG_C_C family protein; KEGG: sfu:Sfum_2781 C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein complement(1342153..1342590) Desulfovibrio salexigens DSM 2638 8092625 YP_002990825.1 CDS Desal_1223 NC_012881.1 1343169 1343648 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: dat:HRM2_37400 HTH-type transcriptional regulator; AsnC family transcriptional regulator 1343169..1343648 Desulfovibrio salexigens DSM 2638 8092626 YP_002990826.1 CDS Desal_1224 NC_012881.1 1343788 1346811 D PFAM: aldehyde Dehydrogenase; Proline dehydrogenase; KEGG: dde:Dde_0054 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; aldehyde Dehydrogenase 1343788..1346811 Desulfovibrio salexigens DSM 2638 8092627 YP_002990827.1 CDS Desal_1225 NC_012881.1 1346895 1348862 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: dde:Dde_0218 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1346895..1348862) Desulfovibrio salexigens DSM 2638 8092628 YP_002990828.1 CDS Desal_1226 NC_012881.1 1349070 1350185 D PFAM: protein of unknown function DUF140; KEGG: dat:HRM2_49250 ABC-type transporter permease protein; hypothetical protein 1349070..1350185 Desulfovibrio salexigens DSM 2638 8093496 YP_002990829.1 CDS Desal_1227 NC_012881.1 1350187 1350984 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pca:Pcar_2750 ABC-type transport system, ATPase component; ABC transporter 1350187..1350984 Desulfovibrio salexigens DSM 2638 8091927 YP_002990830.1 CDS Desal_1228 NC_012881.1 1350981 1352138 D PFAM: mammalian cell entry related domain protein; KEGG: dat:HRM2_49270 ABC-type transporter periplasmic substrate-binding protein; mammalian cell entry related domain protein 1350981..1352138 Desulfovibrio salexigens DSM 2638 8091928 YP_002990831.1 CDS Desal_1229 NC_012881.1 1352138 1352821 D KEGG: pca:Pcar_2752 hypothetical protein; hypothetical protein 1352138..1352821 Desulfovibrio salexigens DSM 2638 8091929 YP_002990832.1 CDS Desal_1230 NC_012881.1 1352803 1353954 R KEGG: dar:Daro_1156 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(1352803..1353954) Desulfovibrio salexigens DSM 2638 8091930 YP_002990833.1 CDS Desal_1231 NC_012881.1 1354148 1354750 D KEGG: nam:NAMH_1592 YheB; YheB protein 1354148..1354750 Desulfovibrio salexigens DSM 2638 8091931 YP_002990834.1 CDS Desal_1232 NC_012881.1 1354867 1355820 D PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dps:DP0368 hypothetical protein; hypothetical protein 1354867..1355820 Desulfovibrio salexigens DSM 2638 8091932 YP_002990835.1 CDS Desal_1233 NC_012881.1 1355836 1357038 D KEGG: dps:DP0367 hypothetical protein; hypothetical protein 1355836..1357038 Desulfovibrio salexigens DSM 2638 8091933 YP_002990836.1 CDS Desal_1234 NC_012881.1 1357213 1358181 D PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dps:DP0368 hypothetical protein; hypothetical protein 1357213..1358181 Desulfovibrio salexigens DSM 2638 8091934 YP_002990837.1 CDS Desal_1235 NC_012881.1 1358181 1359176 D KEGG: GE16687 gene product from transcript GE16687-RA; hypothetical protein 1358181..1359176 Desulfovibrio salexigens DSM 2638 8091935 YP_002990838.1 CDS Desal_1236 NC_012881.1 1359231 1359938 R KEGG: sfr:Sfri_3432 hypothetical protein; hypothetical protein complement(1359231..1359938) Desulfovibrio salexigens DSM 2638 8091936 YP_002990839.1 CDS Desal_1237 NC_012881.1 1360177 1361112 D hypothetical protein 1360177..1361112 Desulfovibrio salexigens DSM 2638 8091937 YP_002990840.1 CDS Desal_1238 NC_012881.1 1361190 1361858 R KEGG: dde:Dde_2632 ribulose-5-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(1361190..1361858) Desulfovibrio salexigens DSM 2638 8091938 YP_002990841.1 CDS Desal_1239 NC_012881.1 1361859 1362323 R SMART: regulatory protein AsnC/Lrp family; KEGG: dvm:DvMF_2900 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(1361859..1362323) Desulfovibrio salexigens DSM 2638 8091939 YP_002990842.1 CDS Desal_1240 NC_012881.1 1362337 1363545 R PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvl:Dvul_2128 radical SAM domain-containing protein; radical SAM domain protein complement(1362337..1363545) Desulfovibrio salexigens DSM 2638 8091940 YP_002990843.1 CDS Desal_1241 NC_012881.1 1363547 1364530 R PFAM: delta-aminolevulinic acid dehydratase; KEGG: dvm:DvMF_2902 delta-aminolevulinic acid dehydratase; porphobilinogen synthase complement(1363547..1364530) Desulfovibrio salexigens DSM 2638 8091941 YP_002990844.1 CDS Desal_1242 NC_012881.1 1364737 1365921 R PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvl:Dvul_2126 radical SAM domain-containing protein; radical SAM domain protein complement(1364737..1365921) Desulfovibrio salexigens DSM 2638 8091942 YP_002990845.1 CDS Desal_1243 NC_012881.1 1366264 1367466 R PFAM: OmpA/MotB domain protein; KEGG: dvm:DvMF_2906 hypothetical protein; OmpA/MotB domain-containing protein complement(1366264..1367466) Desulfovibrio salexigens DSM 2638 8091943 YP_002990846.1 CDS Desal_1244 NC_012881.1 1367555 1367890 R KEGG: dvm:DvMF_2907 hypothetical protein; hypothetical protein complement(1367555..1367890) Desulfovibrio salexigens DSM 2638 8091944 YP_002990847.1 CDS Desal_1245 NC_012881.1 1367910 1368959 R KEGG: dvl:Dvul_2123 hypothetical protein; hypothetical protein complement(1367910..1368959) Desulfovibrio salexigens DSM 2638 8091945 YP_002990848.1 CDS Desal_1246 NC_012881.1 1369047 1370231 R KEGG: dvm:DvMF_2909 hypothetical protein; hypothetical protein complement(1369047..1370231) Desulfovibrio salexigens DSM 2638 8091946 YP_002990849.1 CDS Desal_1247 NC_012881.1 1370235 1371320 R PFAM: glycosyl transferase group 1; KEGG: dvm:DvMF_2910 glycosyl transferase group 1; group 1 glycosyl transferase complement(1370235..1371320) Desulfovibrio salexigens DSM 2638 8091947 YP_002990850.1 CDS Desal_1248 NC_012881.1 1371455 1371997 R TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: dvm:DvMF_2911 flagellar protein FliS; flagellar protein FliS complement(1371455..1371997) Desulfovibrio salexigens DSM 2638 8091948 YP_002990851.1 CDS Desal_1249 NC_012881.1 1372077 1373810 R PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; KEGG: dde:Dde_1120 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein complement(1372077..1373810) Desulfovibrio salexigens DSM 2638 8091949 YP_002990852.1 CDS Desal_1250 NC_012881.1 1374017 1374889 R PFAM: flagellin domain protein; KEGG: dvm:DvMF_2950 flagellin domain protein; flagellin domain-containing protein complement(1374017..1374889) Desulfovibrio salexigens DSM 2638 8091950 YP_002990853.1 CDS Desal_1251 NC_012881.1 1375105 1375908 R PFAM: peptidase M22 glycoprotease; KEGG: dvu:DVU0864 glycoprotease family protein; peptidase M22 glycoprotease complement(1375105..1375908) Desulfovibrio salexigens DSM 2638 8091951 YP_002990854.1 CDS Desal_1252 NC_012881.1 1375909 1376976 R KEGG: dvm:DvMF_2914 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease complement(1375909..1376976) Desulfovibrio salexigens DSM 2638 8091952 YP_002990855.1 CDS Desal_1253 NC_012881.1 1376986 1378188 R KEGG: dde:Dde_1123 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1376986..1378188) Desulfovibrio salexigens DSM 2638 8091953 YP_002990856.1 CDS Desal_1254 NC_012881.1 1378234 1379037 R PFAM: phosphatidate cytidylyltransferase; KEGG: dde:Dde_1125 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(1378234..1379037) Desulfovibrio salexigens DSM 2638 8091954 YP_002990857.1 CDS Desal_1255 NC_012881.1 1379493 1381226 D PFAM: GAF domain protein; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region; KEGG: sfu:Sfum_2177 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1379493..1381226 Desulfovibrio salexigens DSM 2638 8091955 YP_002990858.1 CDS Desal_1256 NC_012881.1 1381259 1381894 R hypothetical protein complement(1381259..1381894) Desulfovibrio salexigens DSM 2638 8091956 YP_002990859.1 CDS Desal_1257 NC_012881.1 1381920 1383035 R hypothetical protein complement(1381920..1383035) Desulfovibrio salexigens DSM 2638 8091957 YP_002990860.1 CDS Desal_1258 NC_012881.1 1383042 1383254 R hypothetical protein complement(1383042..1383254) Desulfovibrio salexigens DSM 2638 8091958 YP_002990861.1 CDS Desal_1259 NC_012881.1 1383276 1385042 R PFAM: SH3 type 3 domain protein; KEGG: ajs:Ajs_2152 methyl-accepting chemotaxis sensory transducer; SH3 type 3 domain-containing protein complement(1383276..1385042) Desulfovibrio salexigens DSM 2638 8091959 YP_002990862.1 CDS Desal_1260 NC_012881.1 1385259 1385990 R KEGG: dvu:DVU0869 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase complement(1385259..1385990) Desulfovibrio salexigens DSM 2638 8091960 YP_002990863.1 CDS Desal_1261 NC_012881.1 1385959 1386516 R TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: dvm:DvMF_2919 ribosome recycling factor; ribosome recycling factor complement(1385959..1386516) Desulfovibrio salexigens DSM 2638 8091961 YP_002990864.1 CDS Desal_1262 NC_012881.1 1386519 1387238 R KEGG: dvm:DvMF_2920 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase complement(1386519..1387238) Desulfovibrio salexigens DSM 2638 8091962 YP_002990865.1 CDS Desal_1263 NC_012881.1 1387676 1388296 R TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: dde:Dde_1132 translation elongation factor Ts (EF-Ts); translation elongation factor Ts complement(1387676..1388296) Desulfovibrio salexigens DSM 2638 8091963 YP_002990866.1 CDS Desal_1264 NC_012881.1 1388299 1389078 R TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; 30S ribosomal protein S2 complement(1388299..1389078) Desulfovibrio salexigens DSM 2638 8091964 YP_002990867.1 CDS Desal_1265 NC_012881.1 1389233 1390000 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: dvl:Dvul_2107 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(1389233..1390000) Desulfovibrio salexigens DSM 2638 8091965 YP_002990868.1 CDS Desal_1266 NC_012881.1 1390084 1391787 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dde:Dde_1137 metallo-beta-lactamase family protein; beta-lactamase complement(1390084..1391787) Desulfovibrio salexigens DSM 2638 8091966 YP_002990869.1 CDS Desal_1267 NC_012881.1 1391780 1392499 R PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: dde:Dde_1136 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase complement(1391780..1392499) Desulfovibrio salexigens DSM 2638 8091967 YP_002990870.1 CDS Desal_1268 NC_012881.1 1392780 1393274 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cps:CPS_4236 hemerythrin family protein; hemerythrin-like metal-binding protein 1392780..1393274 Desulfovibrio salexigens DSM 2638 8091968 YP_002990871.1 CDS Desal_1269 NC_012881.1 1393369 1395552 R TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: pca:Pcar_1175 catalase/peroxidase HPI; catalase/peroxidase HPI complement(1393369..1395552) Desulfovibrio salexigens DSM 2638 8091969 YP_002990872.1 CDS Desal_1270 NC_012881.1 1396028 1398091 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(1396028..1398091) Desulfovibrio salexigens DSM 2638 8091970 YP_002990873.1 CDS Desal_1271 NC_012881.1 1398295 1399257 D PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: sfu:Sfum_1262 hypothetical protein; ParB domain-containing protein nuclease 1398295..1399257 Desulfovibrio salexigens DSM 2638 8091971 YP_002990874.1 CDS Desal_1272 NC_012881.1 1399364 1400464 D PFAM: radical SAM domain protein; KEGG: dol:Dole_1936 DNA repair photolyase-like protein; radical SAM domain protein 1399364..1400464 Desulfovibrio salexigens DSM 2638 8091972 YP_002990875.1 CDS Desal_1273 NC_012881.1 1400704 1400943 D hypothetical protein 1400704..1400943 Desulfovibrio salexigens DSM 2638 8091973 YP_002990876.1 CDS Desal_1274 NC_012881.1 1401200 1401481 D KEGG: sat:SYN_02429 hypothetical protein; hypothetical protein 1401200..1401481 Desulfovibrio salexigens DSM 2638 8091974 YP_002990877.1 CDS Desal_1275 NC_012881.1 1401548 1402018 D hypothetical protein 1401548..1402018 Desulfovibrio salexigens DSM 2638 8091975 YP_002990878.1 CDS Desal_1276 NC_012881.1 1402181 1402804 D hypothetical protein 1402181..1402804 Desulfovibrio salexigens DSM 2638 8091976 YP_002990879.1 CDS Desal_1277 NC_012881.1 1402873 1403397 R KEGG: dvl:Dvul_1879 hypothetical protein; hypothetical protein complement(1402873..1403397) Desulfovibrio salexigens DSM 2638 8091977 YP_002990880.1 CDS Desal_1278 NC_012881.1 1403535 1404704 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1403535..1404704) Desulfovibrio salexigens DSM 2638 8091978 YP_002990881.1 CDS panC NC_012881.1 1404831 1405679 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(1404831..1405679) Desulfovibrio salexigens DSM 2638 8091979 YP_002990882.1 CDS Desal_1280 NC_012881.1 1405887 1406480 D KEGG: dal:Dalk_0127 PAS/PAC sensor protein; hypothetical protein 1405887..1406480 Desulfovibrio salexigens DSM 2638 8091980 YP_002990883.1 CDS Desal_1281 NC_012881.1 1406791 1407234 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: prw:PsycPRwf_1018 AsnC family transcriptional regulator; AsnC family transcriptional regulator 1406791..1407234 Desulfovibrio salexigens DSM 2638 8091981 YP_002990884.1 CDS Desal_1283 NC_012881.1 1407837 1410263 D PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dde:Dde_1279 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1407837..1410263 Desulfovibrio salexigens DSM 2638 8091983 YP_002990885.1 CDS Desal_1284 NC_012881.1 1410316 1412364 R KEGG: dal:Dalk_5047 CheW protein; CheW protein complement(1410316..1412364) Desulfovibrio salexigens DSM 2638 8091984 YP_002990886.1 CDS Desal_1285 NC_012881.1 1412741 1415176 D KEGG: dvm:DvMF_2851 diguanylate cyclase and serine/threonine protein kinase with TPR repeats; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; Sel1 domain protein repeat-containing protein; hypothetical protein; SMART: GGDEF domain containing protein; Sel1 domain protein repeat-containing protein; hypothetical protein; diguanylate cyclase and serine/threonine protein kinase with TPR repeats 1412741..1415176 Desulfovibrio salexigens DSM 2638 8091985 YP_002990887.1 CDS Desal_1286 NC_012881.1 1415191 1415793 D PFAM: lytic transglycosylase catalytic; KEGG: ppd:Ppro_3796 lytic transglycosylase, catalytic; lytic transglycosylase 1415191..1415793 Desulfovibrio salexigens DSM 2638 8091986 YP_002990888.1 CDS Desal_1287 NC_012881.1 1415798 1416283 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: pol:Bpro_2458 CheW protein; CheW protein 1415798..1416283 Desulfovibrio salexigens DSM 2638 8091987 YP_002990889.1 CDS Desal_1288 NC_012881.1 1416276 1417832 D KEGG: dal:Dalk_4669 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; SMART: MCP methyltransferase CheR-type; hypothetical protein; chemotaxis protein CheR 1416276..1417832 Desulfovibrio salexigens DSM 2638 8091988 YP_002990890.1 CDS Desal_1289 NC_012881.1 1417854 1418432 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: gme:Gmet_2708 CheW protein; CheW protein 1417854..1418432 Desulfovibrio salexigens DSM 2638 8091989 YP_002990891.1 CDS Desal_1290 NC_012881.1 1418453 1420780 D PFAM: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: sat:SYN_00431 chemotaxis protein; CheA signal transduction histidine kinase 1418453..1420780 Desulfovibrio salexigens DSM 2638 8091990 YP_002990892.1 CDS Desal_1291 NC_012881.1 1420916 1421983 D PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; KEGG: sat:SYN_00430 protein-glutamate methylesterase; response regulator receiver modulated CheB methylesterase 1420916..1421983 Desulfovibrio salexigens DSM 2638 8091991 YP_002990893.1 CDS Desal_1292 NC_012881.1 1421983 1424451 D KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; multi-sensor hybrid histidine kinase 1421983..1424451 Desulfovibrio salexigens DSM 2638 8091992 YP_002990894.1 CDS Desal_1293 NC_012881.1 1424534 1426183 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(1424534..1426183) Desulfovibrio salexigens DSM 2638 8091993 YP_002990895.1 CDS Desal_1294 NC_012881.1 1426411 1426857 R KEGG: ppf:Pput_0669 hypothetical protein; hypothetical protein complement(1426411..1426857) Desulfovibrio salexigens DSM 2638 8091994 YP_002990896.1 CDS Desal_1295 NC_012881.1 1426877 1427338 R KEGG: dvm:DvMF_2766 hypothetical protein; hypothetical protein complement(1426877..1427338) Desulfovibrio salexigens DSM 2638 8091995 YP_002990897.1 CDS Desal_1296 NC_012881.1 1427541 1428161 R PFAM: TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: dvl:Dvul_0116 TPR repeat-containing protein; hypothetical protein complement(1427541..1428161) Desulfovibrio salexigens DSM 2638 8091996 YP_002990898.1 CDS Desal_1297 NC_012881.1 1428226 1428573 R KEGG: dde:Dde_3773 hypothetical protein; hypothetical protein complement(1428226..1428573) Desulfovibrio salexigens DSM 2638 8091997 YP_002990899.1 CDS Desal_1298 NC_012881.1 1428590 1429360 R PFAM: protein of unknown function UPF0153; KEGG: dde:Dde_3774 hypothetical protein; hypothetical protein complement(1428590..1429360) Desulfovibrio salexigens DSM 2638 8091998 YP_002990900.1 CDS Desal_1299 NC_012881.1 1429701 1429889 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_3775 ferredoxin I; 4Fe-4S ferredoxin complement(1429701..1429889) Desulfovibrio salexigens DSM 2638 8091999 YP_002990901.1 CDS Desal_1300 NC_012881.1 1430238 1431437 D PFAM: peptidase M29 aminopeptidase II; KEGG: dal:Dalk_2842 peptidase M29 aminopeptidase II; peptidase M29 aminopeptidase II 1430238..1431437 Desulfovibrio salexigens DSM 2638 8092000 YP_002990902.1 CDS Desal_1301 NC_012881.1 1431748 1432338 D KEGG: gsu:GSU1949 hypothetical protein; hypothetical protein 1431748..1432338 Desulfovibrio salexigens DSM 2638 8092001 YP_002990903.1 CDS Desal_1302 NC_012881.1 1432404 1433645 R PFAM: amino acid permease-associated region; KEGG: tau:Tola_2339 amino acid permease-associated region; amino acid permease complement(1432404..1433645) Desulfovibrio salexigens DSM 2638 8092002 YP_002990904.1 CDS Desal_1303 NC_012881.1 1433763 1434638 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_4502 transcriptional regulator, LysR family; LysR family transcriptional regulator 1433763..1434638 Desulfovibrio salexigens DSM 2638 8092003 YP_002990905.1 CDS Desal_1304 NC_012881.1 1434726 1435169 D PFAM: threonyl/alanyl tRNA synthetase SAD; KEGG: dat:HRM2_40520 AlaS2; threonyl/alanyl tRNA synthetase SAD 1434726..1435169 Desulfovibrio salexigens DSM 2638 8092004 YP_002990906.1 CDS Desal_1305 NC_012881.1 1435379 1436635 D PFAM: glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bja:bll5912 serine hydroxymethyltransferase; glycine hydroxymethyltransferase 1435379..1436635 Desulfovibrio salexigens DSM 2638 8092005 YP_002990907.1 CDS Desal_1306 NC_012881.1 1436839 1437438 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: dde:Dde_0373 phosphoesterase, PA-phosphatase related; PA-phosphatase like phosphoesterase complement(1436839..1437438) Desulfovibrio salexigens DSM 2638 8092006 YP_002990908.1 CDS Desal_1307 NC_012881.1 1437652 1438776 D PFAM: glycosyl transferase group 1; KEGG: dvu:DVU2635 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 1437652..1438776 Desulfovibrio salexigens DSM 2638 8092007 YP_002990909.1 CDS Desal_1308 NC_012881.1 1438802 1439659 R KEGG: hch:HCH_00722 hypothetical protein; hypothetical protein complement(1438802..1439659) Desulfovibrio salexigens DSM 2638 8091372 YP_002990910.1 CDS Desal_1309 NC_012881.1 1439763 1440542 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(1439763..1440542) Desulfovibrio salexigens DSM 2638 8091131 YP_002990911.1 CDS hisH NC_012881.1 1440535 1441173 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(1440535..1441173) Desulfovibrio salexigens DSM 2638 8091132 YP_002990912.1 CDS Desal_1311 NC_012881.1 1441411 1442220 R PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: dde:Dde_1302 heat shock protein DnaJ-like; heat shock protein DnaJ domain-containing protein complement(1441411..1442220) Desulfovibrio salexigens DSM 2638 8091133 YP_002990913.1 CDS Desal_1312 NC_012881.1 1442229 1442666 R PFAM: protein of unknown function UPF0153; KEGG: dds:Ddes_0986 protein of unknown function UPF0153; hypothetical protein complement(1442229..1442666) Desulfovibrio salexigens DSM 2638 8091134 YP_002990914.1 CDS Desal_1313 NC_012881.1 1442666 1443088 R PFAM: CoA-binding domain protein; KEGG: dds:Ddes_0987 CoA-binding domain-containing protein; CoA-binding protein complement(1442666..1443088) Desulfovibrio salexigens DSM 2638 8091135 YP_002990915.1 CDS Desal_1314 NC_012881.1 1443210 1444439 D PFAM: peptidase M24; KEGG: dvu:DVU1000 M24 family peptidase; peptidase M24 1443210..1444439 Desulfovibrio salexigens DSM 2638 8091136 YP_002990916.1 CDS Desal_1315 NC_012881.1 1444499 1445158 R PFAM: nitroreductase; KEGG: vfm:VFMJ11_A0141 major NAD(p)h-flavin oxidoreductase; nitroreductase complement(1444499..1445158) Desulfovibrio salexigens DSM 2638 8091137 YP_002990917.1 CDS Desal_1316 NC_012881.1 1445382 1446173 D KEGG: mmw:Mmwyl1_0554 hypothetical protein; hypothetical protein 1445382..1446173 Desulfovibrio salexigens DSM 2638 8091138 YP_002990918.1 CDS Desal_1317 NC_012881.1 1446285 1447169 R KEGG: dds:Ddes_1500 FHA domain containing protein; hypothetical protein complement(1446285..1447169) Desulfovibrio salexigens DSM 2638 8091139 YP_002990919.1 CDS Desal_1318 NC_012881.1 1447426 1448613 R PFAM: iron-containing alcohol dehydrogenase; KEGG: dvl:Dvul_0480 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1447426..1448613) Desulfovibrio salexigens DSM 2638 8091140 YP_002990920.1 CDS Desal_1319 NC_012881.1 1448701 1449222 R KEGG: spe:Spro_3550 kinase; kinase complement(1448701..1449222) Desulfovibrio salexigens DSM 2638 8091141 YP_002990921.1 CDS Desal_1320 NC_012881.1 1449222 1449617 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lch:Lcho_2227 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1449222..1449617) Desulfovibrio salexigens DSM 2638 8091142 YP_002990922.1 CDS Desal_1321 NC_012881.1 1449627 1451567 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: dde:Dde_1301 thiol:disulfide interchange protein-like; cytochrome c biogenesis protein transmembrane region complement(1449627..1451567) Desulfovibrio salexigens DSM 2638 8091143 YP_002990923.1 CDS Desal_1322 NC_012881.1 1451925 1452731 R PFAM: protein of unknown function UPF0153; KEGG: scl:sce4748 hypothetical protein; hypothetical protein complement(1451925..1452731) Desulfovibrio salexigens DSM 2638 8091145 YP_002990924.1 CDS Desal_1323 NC_012881.1 1453242 1454291 D PFAM: acyltransferase 3; KEGG: rrj:RrIowa_1497 hypothetical protein; acyltransferase 3 1453242..1454291 Desulfovibrio salexigens DSM 2638 8091146 YP_002990925.1 CDS Desal_1324 NC_012881.1 1454372 1455400 R PFAM: extracellular solute-binding protein family 1; KEGG: mca:MCA0869 spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein PotD; extracellular solute-binding protein complement(1454372..1455400) Desulfovibrio salexigens DSM 2638 8091147 YP_002990926.1 CDS potC NC_012881.1 1455400 1456167 R can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; spermidine/putrescine ABC transporter membrane protein complement(1455400..1456167) Desulfovibrio salexigens DSM 2638 8091148 YP_002990927.1 CDS Desal_1326 NC_012881.1 1456164 1457018 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_3671 polyamine ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(1456164..1457018) Desulfovibrio salexigens DSM 2638 8091149 YP_002990928.1 CDS Desal_1327 NC_012881.1 1457008 1458126 R KEGG: dde:Dde_3670 putrescine/spermidine ABC transporter ATPase protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; spermidine/putrescine ABC transporter ATPase complement(1457008..1458126) Desulfovibrio salexigens DSM 2638 8091150 YP_002990929.1 CDS Desal_1328 NC_012881.1 1458148 1458420 R hypothetical protein complement(1458148..1458420) Desulfovibrio salexigens DSM 2638 8091151 YP_002990930.1 CDS Desal_1329 NC_012881.1 1458437 1458985 R PFAM: GCN5-related N-acetyltransferase; KEGG: dol:Dole_1891 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1458437..1458985) Desulfovibrio salexigens DSM 2638 8091152 YP_002990931.1 CDS Desal_1330 NC_012881.1 1459078 1459350 R KEGG: dvm:DvMF_1509 hypothetical protein; hypothetical protein complement(1459078..1459350) Desulfovibrio salexigens DSM 2638 8091153 YP_002990932.1 CDS Desal_1331 NC_012881.1 1459618 1461015 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: dvm:DvMF_1510 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator complement(1459618..1461015) Desulfovibrio salexigens DSM 2638 8091154 YP_002990933.1 CDS Desal_1332 NC_012881.1 1461358 1462692 D KEGG: dde:Dde_2281 ferredoxin hydrogenase; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase, Fe-only 1461358..1462692 Desulfovibrio salexigens DSM 2638 8091155 YP_002990934.1 CDS Desal_1333 NC_012881.1 1462705 1463043 D PFAM: iron hydrogenase small subunit; KEGG: dde:Dde_2280 periplasmic (Fe) hydrogenase small subunit precursor; iron hydrogenase small subunit 1462705..1463043 Desulfovibrio salexigens DSM 2638 8091156 YP_002990935.1 CDS Desal_1334 NC_012881.1 1463256 1463498 D KEGG: sat:SYN_02132 transcriptional regulator; transcriptional regulator 1463256..1463498 Desulfovibrio salexigens DSM 2638 8091157 YP_002990936.1 CDS thiH NC_012881.1 1463513 1464937 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 1463513..1464937 Desulfovibrio salexigens DSM 2638 8091158 YP_002990937.1 CDS Desal_1336 NC_012881.1 1464956 1466395 D catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 1464956..1466395 Desulfovibrio salexigens DSM 2638 8091159 YP_002990938.1 CDS Desal_1337 NC_012881.1 1466392 1466997 D KEGG: dde:Dde_3553 hypothetical protein; hypothetical protein 1466392..1466997 Desulfovibrio salexigens DSM 2638 8091160 YP_002990939.1 CDS Desal_1338 NC_012881.1 1466978 1467982 D PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dde:Dde_2277 biotin synthase; radical SAM domain protein 1466978..1467982 Desulfovibrio salexigens DSM 2638 8091161 YP_002990940.1 CDS Desal_1339 NC_012881.1 1467975 1469177 D TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: dde:Dde_2276 small GTP-binding protein domain-containing protein; small GTP-binding protein 1467975..1469177 Desulfovibrio salexigens DSM 2638 8091162 YP_002990941.1 CDS Desal_1340 NC_012881.1 1469593 1471347 R KEGG: cju:C8J_0036 hypothetical protein; hypothetical protein complement(1469593..1471347) Desulfovibrio salexigens DSM 2638 8091163 YP_002990942.1 CDS Desal_1341 NC_012881.1 1471575 1471865 D hypothetical protein 1471575..1471865 Desulfovibrio salexigens DSM 2638 8091164 YP_002990943.1 CDS Desal_1342 NC_012881.1 1471949 1472749 R KEGG: tau:Tola_2602 hypothetical protein; hypothetical protein complement(1471949..1472749) Desulfovibrio salexigens DSM 2638 8091165 YP_002990944.1 CDS Desal_1343 NC_012881.1 1472731 1473348 R PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: bph:Bphy_0477 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1472731..1473348) Desulfovibrio salexigens DSM 2638 8091166 YP_002990945.1 CDS pheT NC_012881.1 1473553 1475964 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(1473553..1475964) Desulfovibrio salexigens DSM 2638 8091167 YP_002990946.1 CDS pheS NC_012881.1 1475997 1477043 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(1475997..1477043) Desulfovibrio salexigens DSM 2638 8091168 YP_002990947.1 CDS Desal_1346 NC_012881.1 1477044 1477397 R TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: dvl:Dvul_0710 50S ribosomal protein L20; 50S ribosomal protein L20 complement(1477044..1477397) Desulfovibrio salexigens DSM 2638 8091169 YP_002990948.1 CDS rpmI NC_012881.1 1477506 1477703 R TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: dvm:DvMF_0982 50S ribosomal protein L35; 50S ribosomal protein L35 complement(1477506..1477703) Desulfovibrio salexigens DSM 2638 8091170 YP_002990949.1 CDS infC NC_012881.1 1477749 1478213 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(1477749..1478213) Desulfovibrio salexigens DSM 2638 8091171 YP_002990950.1 CDS Desal_1349 NC_012881.1 1478281 1480209 R TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; threonyl/alanyl tRNA synthetase SAD; KEGG: dde:Dde_2639 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase complement(1478281..1480209) Desulfovibrio salexigens DSM 2638 8091172 YP_002990951.1 CDS Desal_1350 NC_012881.1 1480576 1482240 R PFAM: sulfatase; KEGG: noc:Noc_0194 arylsulfatase A and related enzyme; sulfatase complement(1480576..1482240) Desulfovibrio salexigens DSM 2638 8091173 YP_002990952.1 CDS Desal_1351 NC_012881.1 1482311 1483555 R PFAM: radical SAM domain protein; SEC-C motif domain protein; KEGG: sfu:Sfum_2157 radical SAM domain protein; radical SAM domain protein complement(1482311..1483555) Desulfovibrio salexigens DSM 2638 8091174 YP_002990953.1 CDS Desal_1352 NC_012881.1 1483653 1484378 R PFAM: acyl-ACP thioesterase; KEGG: bba:Bd2498 hypothetical protein; acyl-ACP thioesterase complement(1483653..1484378) Desulfovibrio salexigens DSM 2638 8091175 YP_002990954.1 CDS Desal_1353 NC_012881.1 1484380 1486497 R KEGG: gsu:GSU3061 squalene-hopene cyclase; TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase complement(1484380..1486497) Desulfovibrio salexigens DSM 2638 8091176 YP_002990955.1 CDS Desal_1354 NC_012881.1 1486569 1487177 R PFAM: regulatory protein TetR; KEGG: pca:Pcar_0440 TetR/AcrR family transcriptional regulator; TetR family transcriptional regulator complement(1486569..1487177) Desulfovibrio salexigens DSM 2638 8091177 YP_002990956.1 CDS Desal_1355 NC_012881.1 1487712 1489088 D KEGG: dvm:DvMF_1777 prophage PSPPH06, reverse transcriptase/maturase; reverse transcriptase/maturase 1487712..1489088 Desulfovibrio salexigens DSM 2638 8091179 YP_002990957.1 CDS Desal_1356 NC_012881.1 1489283 1489882 D KEGG: dvm:DvMF_1778 hypothetical protein; hypothetical protein 1489283..1489882 Desulfovibrio salexigens DSM 2638 8091180 YP_002990958.1 CDS Desal_1357 NC_012881.1 1490105 1490206 D hypothetical protein 1490105..1490206 Desulfovibrio salexigens DSM 2638 8091181 YP_002990959.1 CDS Desal_1358 NC_012881.1 1490278 1491018 R SMART: extracellular solute-binding protein family 3; KEGG: sse:Ssed_3830 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(1490278..1491018) Desulfovibrio salexigens DSM 2638 8091182 YP_002990960.1 CDS Desal_1359 NC_012881.1 1491366 1492793 D TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC; citrate transporter; KEGG: dvl:Dvul_2552 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 1491366..1492793 Desulfovibrio salexigens DSM 2638 8091183 YP_002990961.1 CDS Desal_1360 NC_012881.1 1492810 1494369 D PFAM: sulfatase; KEGG: dvu:DVU0380 sulfatase; sulfatase 1492810..1494369 Desulfovibrio salexigens DSM 2638 8091184 YP_002990962.1 CDS Desal_1361 NC_012881.1 1494414 1495091 D PFAM: cyclic nucleotide-binding; transcriptional regulator TrmB; SMART: cyclic nucleotide-binding; KEGG: dvl:Dvul_2554 cyclic nucleotide-binding protein; TrmB family transcriptional regulator 1494414..1495091 Desulfovibrio salexigens DSM 2638 8091185 YP_002990963.1 CDS Desal_1362 NC_012881.1 1495135 1495449 D PFAM: Thioredoxin domain; KEGG: dvl:Dvul_2555 glutaredoxin; thioredoxin 1495135..1495449 Desulfovibrio salexigens DSM 2638 8091186 YP_002990964.1 CDS Desal_1363 NC_012881.1 1495467 1496381 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: dvl:Dvul_2556 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1495467..1496381 Desulfovibrio salexigens DSM 2638 8091187 YP_002990965.1 CDS Desal_1364 NC_012881.1 1496385 1496672 D KEGG: dvl:Dvul_2557 hypothetical protein; hypothetical protein 1496385..1496672 Desulfovibrio salexigens DSM 2638 8091188 YP_002990966.1 CDS Desal_1365 NC_012881.1 1497049 1498398 D KEGG: dps:DP2951 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE4 domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1497049..1498398 Desulfovibrio salexigens DSM 2638 8091189 YP_002990967.1 CDS Desal_1366 NC_012881.1 1498415 1499038 R PFAM: protein of unknown function UPF0126; KEGG: mmw:Mmwyl1_1412 hypothetical protein; hypothetical protein complement(1498415..1499038) Desulfovibrio salexigens DSM 2638 8091190 YP_002990968.1 CDS Desal_1367 NC_012881.1 1499062 1501332 R KEGG: dde:Dde_3718 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1499062..1501332) Desulfovibrio salexigens DSM 2638 8091191 YP_002990969.1 CDS Desal_1368 NC_012881.1 1501361 1501792 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dvm:DvMF_2591 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator complement(1501361..1501792) Desulfovibrio salexigens DSM 2638 8091192 YP_002990970.1 CDS Desal_1369 NC_012881.1 1501894 1503864 R KEGG: dde:Dde_3715 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; multi-sensor signal transduction histidine kinase complement(1501894..1503864) Desulfovibrio salexigens DSM 2638 8091193 YP_002990971.1 CDS Desal_1370 NC_012881.1 1503933 1504298 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvl:Dvul_2719 response regulator receiver protein; response regulator receiver protein complement(1503933..1504298) Desulfovibrio salexigens DSM 2638 8091194 YP_002990972.1 CDS Desal_1371 NC_012881.1 1504440 1504793 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dol:Dole_2257 response regulator receiver protein; response regulator receiver protein complement(1504440..1504793) Desulfovibrio salexigens DSM 2638 8091195 YP_002990973.1 CDS Desal_1372 NC_012881.1 1504897 1505790 R PFAM: UspA domain protein; KEGG: dol:Dole_2256 UspA domain-containing protein; UspA domain-containing protein complement(1504897..1505790) Desulfovibrio salexigens DSM 2638 8091196 YP_002990974.1 CDS Desal_1373 NC_012881.1 1505853 1507241 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dde:Dde_0648 hmc operon protein 6; hypothetical protein complement(1505853..1507241) Desulfovibrio salexigens DSM 2638 8091197 YP_002990975.1 CDS Desal_1374 NC_012881.1 1507275 1507952 R KEGG: dol:Dole_2254 hmc operon protein 5; hmc operon protein 5 complement(1507275..1507952) Desulfovibrio salexigens DSM 2638 8091198 YP_002990976.1 CDS Desal_1375 NC_012881.1 1507977 1508138 R KEGG: dvm:DvMF_2595 hmc operon protein 4; hmc operon protein 4 complement(1507977..1508138) Desulfovibrio salexigens DSM 2638 8091199 YP_002990977.1 CDS Desal_1376 NC_012881.1 1508162 1509334 R PFAM: polysulphide reductase NrfD; KEGG: dvl:Dvul_2407 polysulphide reductase, NrfD; polysulfide reductase NrfD complement(1508162..1509334) Desulfovibrio salexigens DSM 2638 8091200 YP_002990978.1 CDS Desal_1377 NC_012881.1 1509334 1510395 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dol:Dole_2251 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(1509334..1510395) Desulfovibrio salexigens DSM 2638 8091201 YP_002990979.1 CDS Desal_1378 NC_012881.1 1510425 1512062 R PFAM: cytochrome c class III; KEGG: dvl:Dvul_2405 cytochrome c, class III; cytochrome c class III complement(1510425..1512062) Desulfovibrio salexigens DSM 2638 8091202 YP_002990980.1 CDS Desal_1379 NC_012881.1 1512518 1512841 D PFAM: protein of unknown function DUF805; KEGG: ecm:EcSMS35_3402 inner membrane protein; hypothetical protein 1512518..1512841 Desulfovibrio salexigens DSM 2638 8091203 YP_002990981.1 CDS Desal_1380 NC_012881.1 1513084 1514508 R PFAM: protein of unknown function DUF195; protein of unknown function DUF1043; KEGG: azo:azo2787 RumC-like protein; hypothetical protein complement(1513084..1514508) Desulfovibrio salexigens DSM 2638 8091204 YP_002990982.1 CDS Desal_1381 NC_012881.1 1514669 1515469 R KEGG: dps:DP1985 deca-heme C-type cytochrome; deca-heme C-type cytochrome complement(1514669..1515469) Desulfovibrio salexigens DSM 2638 8092924 YP_002990983.1 CDS Desal_1382 NC_012881.1 1515466 1516116 R KEGG: rfr:Rfer_4073 cytochrome c family protein; hypothetical protein complement(1515466..1516116) Desulfovibrio salexigens DSM 2638 8093012 YP_002990984.1 CDS Desal_1383 NC_012881.1 1516126 1517412 R KEGG: sun:SUN_0469 hypothetical protein; hypothetical protein complement(1516126..1517412) Desulfovibrio salexigens DSM 2638 8093013 YP_002990985.1 CDS Desal_1384 NC_012881.1 1517745 1518554 R KEGG: sfu:Sfum_3174 hypothetical protein; hypothetical protein complement(1517745..1518554) Desulfovibrio salexigens DSM 2638 8093014 YP_002990986.1 CDS Desal_1385 NC_012881.1 1518620 1518997 R PFAM: cytochrome c class III; KEGG: dol:Dole_2250 cytochrome c class III; cytochrome c class III complement(1518620..1518997) Desulfovibrio salexigens DSM 2638 8093015 YP_002990987.1 CDS Desal_1386 NC_012881.1 1519309 1519977 R PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: dde:Dde_2579 GntR family transcriptional regulator; GntR family transcriptional regulator complement(1519309..1519977) Desulfovibrio salexigens DSM 2638 8093016 YP_002990988.1 CDS Desal_1387 NC_012881.1 1520220 1521449 R KEGG: dps:DP1513 hypothetical protein; hypothetical protein complement(1520220..1521449) Desulfovibrio salexigens DSM 2638 8093017 YP_002990989.1 CDS Desal_1388 NC_012881.1 1521509 1522789 R TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dps:DP1512 DctM (C4-dicarboxylate permease, large subunit); TRAP dicarboxylate transporter subunit DctM complement(1521509..1522789) Desulfovibrio salexigens DSM 2638 8093018 YP_002990990.1 CDS Desal_1389 NC_012881.1 1522803 1523321 R PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dps:DP1511 DctQ (C4-dicarboxylate permease, small subunit); tripartite ATP-independent periplasmic transporter DctQ component complement(1522803..1523321) Desulfovibrio salexigens DSM 2638 8093019 YP_002990991.1 CDS Desal_1390 NC_012881.1 1523354 1524349 R TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dps:DP1510 DctP (periplasmic C4-dicarboxylate binding protein); TRAP dicarboxylate transporter subunit DctP complement(1523354..1524349) Desulfovibrio salexigens DSM 2638 8093020 YP_002990992.1 CDS Desal_1391 NC_012881.1 1524481 1525482 R catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase complement(1524481..1525482) Desulfovibrio salexigens DSM 2638 8093021 YP_002990993.1 CDS Desal_1392 NC_012881.1 1525503 1525886 R TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: dat:HRM2_03120 translation initiation inhibitor (YigF-like protein); endoribonuclease L-PSP complement(1525503..1525886) Desulfovibrio salexigens DSM 2638 8093022 YP_002990994.1 CDS Desal_1393 NC_012881.1 1526295 1527527 R PFAM: sodium:dicarboxylate symporter; KEGG: dps:DP1506 H+/Na+-glutamate symporter; sodium:dicarboxylate symporter complement(1526295..1527527) Desulfovibrio salexigens DSM 2638 8093023 YP_002990995.1 CDS Desal_1394 NC_012881.1 1528164 1528919 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: cvi:CV_3309 hypothetical protein; family 3 extracellular solute-binding protein 1528164..1528919 Desulfovibrio salexigens DSM 2638 8093024 YP_002990996.1 CDS Desal_1395 NC_012881.1 1529422 1530417 D PFAM: protein of unknown function DUF1611; KEGG: sil:SPO3607 hypothetical protein; hypothetical protein 1529422..1530417 Desulfovibrio salexigens DSM 2638 8093025 YP_002990997.1 CDS Desal_1396 NC_012881.1 1530417 1531385 D PFAM: mandelate racemase/muconate lactonizing protein; KEGG: sit:TM1040_3167 mandelate racemase/muconate lactonizing-like protein; mandelate racemase/muconate lactonizing protein 1530417..1531385 Desulfovibrio salexigens DSM 2638 8093026 YP_002990998.1 CDS Desal_1397 NC_012881.1 1531420 1532265 D PFAM: aminotransferase class IV; KEGG: rsq:Rsph17025_2484 aminotransferase, class IV; class IV aminotransferase 1531420..1532265 Desulfovibrio salexigens DSM 2638 8093027 YP_002990999.1 CDS Desal_1398 NC_012881.1 1532462 1533502 D KEGG: aha:AHA_1230 ABC-type sugar transport system, ATPase component; sugar ABC transporter ATPase 1532462..1533502 Desulfovibrio salexigens DSM 2638 8093028 YP_002991000.1 CDS Desal_1399 NC_012881.1 1533513 1535060 R PFAM: FAD dependent oxidoreductase; HI0933 family protein; KEGG: dde:Dde_2466 hypothetical protein; FAD dependent oxidoreductase complement(1533513..1535060) Desulfovibrio salexigens DSM 2638 8093029 YP_002991001.1 CDS Desal_1400 NC_012881.1 1535268 1535876 D PFAM: NADPH-dependent FMN reductase; KEGG: dal:Dalk_3512 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1535268..1535876 Desulfovibrio salexigens DSM 2638 8093030 YP_002991002.1 CDS Desal_1401 NC_012881.1 1536160 1536375 D hypothetical protein 1536160..1536375 Desulfovibrio salexigens DSM 2638 8093031 YP_002991003.1 CDS Desal_1402 NC_012881.1 1536536 1537702 D PFAM: major facilitator superfamily MFS_1; KEGG: dps:DP2747 membrane transporter; major facilitator superfamily protein 1536536..1537702 Desulfovibrio salexigens DSM 2638 8093032 YP_002991004.1 CDS Desal_1403 NC_012881.1 1537991 1538128 D hypothetical protein 1537991..1538128 Desulfovibrio salexigens DSM 2638 8093033 YP_002991005.1 CDS Desal_1404 NC_012881.1 1538209 1540617 R KEGG: dvl:Dvul_2560 CoA-binding domain-containing protein; CoA-binding domain-containing protein complement(1538209..1540617) Desulfovibrio salexigens DSM 2638 8093034 YP_002991006.1 CDS Desal_1405 NC_012881.1 1540906 1541241 D KEGG: dvu:DVU1720 hypothetical protein; hypothetical protein 1540906..1541241 Desulfovibrio salexigens DSM 2638 8093035 YP_002991007.1 CDS Desal_1406 NC_012881.1 1541238 1541876 D KEGG: ecg:E2348C_2752 predicted endoprotease; endoprotease 1541238..1541876 Desulfovibrio salexigens DSM 2638 8093036 YP_002991008.1 CDS Desal_1407 NC_012881.1 1542057 1542590 D KEGG: ect:ECIAI39_2677 hypothetical protein from phage origin; hypothetical protein 1542057..1542590 Desulfovibrio salexigens DSM 2638 8093037 YP_002991009.1 CDS Desal_1408 NC_012881.1 1543006 1543455 R hypothetical protein complement(1543006..1543455) Desulfovibrio salexigens DSM 2638 8093038 YP_002991010.1 CDS Desal_1409 NC_012881.1 1543462 1544208 R PFAM: endonuclease I; KEGG: pin:Ping_2580 deoxyribonuclease I; deoxyribonuclease I complement(1543462..1544208) Desulfovibrio salexigens DSM 2638 8093039 YP_002991011.1 CDS Desal_1410 NC_012881.1 1544430 1545344 R KEGG: shm:Shewmr7_3185 hypothetical protein; hypothetical protein complement(1544430..1545344) Desulfovibrio salexigens DSM 2638 8093040 YP_002991012.1 CDS Desal_1411 NC_012881.1 1545344 1545976 R KEGG: shm:Shewmr7_3186 hypothetical protein; hypothetical protein complement(1545344..1545976) Desulfovibrio salexigens DSM 2638 8093041 YP_002991013.1 CDS Desal_1412 NC_012881.1 1545989 1548397 R KEGG: gbm:Gbem_3568 type III restriction protein res subunit; PFAM: EcoEI R domain protein; protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; type I site-specific deoxyribonuclease complement(1545989..1548397) Desulfovibrio salexigens DSM 2638 8093042 YP_002991014.1 CDS Desal_1413 NC_012881.1 1548629 1549174 R KEGG: nmn:NMCC_0102 cysteinyl-tRNA synthetase; hypothetical protein complement(1548629..1549174) Desulfovibrio salexigens DSM 2638 8093043 YP_002991015.1 CDS Desal_1414 NC_012881.1 1549167 1550231 R KEGG: psp:PSPPH_4785 ATP-binding protein; ATP-binding protein complement(1549167..1550231) Desulfovibrio salexigens DSM 2638 8093044 YP_002991016.1 CDS Desal_1415 NC_012881.1 1550325 1551230 R KEGG: oan:Oant_1849 hypothetical protein; hypothetical protein complement(1550325..1551230) Desulfovibrio salexigens DSM 2638 8093045 YP_002991017.1 CDS Desal_1416 NC_012881.1 1551230 1552393 R PFAM: restriction modification system DNA specificity domain; KEGG: gur:Gura_2097 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein complement(1551230..1552393) Desulfovibrio salexigens DSM 2638 8093046 YP_002991018.1 CDS Desal_1417 NC_012881.1 1552393 1553862 R PFAM: N-6 DNA methylase; KEGG: gbm:Gbem_3570 N-6 DNA methylase; N-6 DNA methylase complement(1552393..1553862) Desulfovibrio salexigens DSM 2638 8093047 YP_002991019.1 CDS Desal_1418 NC_012881.1 1554488 1554763 D hypothetical protein 1554488..1554763 Desulfovibrio salexigens DSM 2638 8093048 YP_002991020.1 CDS Desal_1419 NC_012881.1 1554776 1555546 D hypothetical protein 1554776..1555546 Desulfovibrio salexigens DSM 2638 8093049 YP_002991021.1 CDS Desal_1420 NC_012881.1 1555753 1556139 D KEGG: dde:Dde_0778 hypothetical protein; hypothetical protein 1555753..1556139 Desulfovibrio salexigens DSM 2638 8093050 YP_002991022.1 CDS Desal_1421 NC_012881.1 1556202 1556525 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: geo:Geob_0597 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(1556202..1556525) Desulfovibrio salexigens DSM 2638 8093051 YP_002991023.1 CDS Desal_1422 NC_012881.1 1556682 1556828 D hypothetical protein 1556682..1556828 Desulfovibrio salexigens DSM 2638 8093052 YP_002991024.1 CDS Desal_1423 NC_012881.1 1556791 1556961 D hypothetical protein 1556791..1556961 Desulfovibrio salexigens DSM 2638 8093053 YP_002991025.1 CDS Desal_1424 NC_012881.1 1557048 1557752 D hypothetical protein 1557048..1557752 Desulfovibrio salexigens DSM 2638 8093054 YP_002991026.1 CDS Desal_1425 NC_012881.1 1557992 1558126 D hypothetical protein 1557992..1558126 Desulfovibrio salexigens DSM 2638 8093055 YP_002991027.1 CDS Desal_1426 NC_012881.1 1558211 1559053 D KEGG: viral A-type inclusion protein; hypothetical protein 1558211..1559053 Desulfovibrio salexigens DSM 2638 8093056 YP_002991028.1 CDS Desal_1427 NC_012881.1 1559159 1560046 D KEGG: dol:Dole_2910 hypothetical protein; hypothetical protein 1559159..1560046 Desulfovibrio salexigens DSM 2638 8093057 YP_002991029.1 CDS Desal_1428 NC_012881.1 1560217 1561971 D KEGG: pca:Pcar_0796 hypothetical protein; hypothetical protein 1560217..1561971 Desulfovibrio salexigens DSM 2638 8093058 YP_002991030.1 CDS Desal_1429 NC_012881.1 1562889 1563338 D hypothetical protein 1562889..1563338 Desulfovibrio salexigens DSM 2638 8093059 YP_002991031.1 CDS Desal_1430 NC_012881.1 1563376 1564005 R PFAM: Resolvase domain; KEGG: gme:Gmet_3142 resolvase-like protein; resolvase complement(1563376..1564005) Desulfovibrio salexigens DSM 2638 8093060 YP_002991032.1 CDS Desal_1431 NC_012881.1 1564775 1566094 D PFAM: integrase family protein; KEGG: dde:Dde_0620 hypothetical protein; integrase family protein 1564775..1566094 Desulfovibrio salexigens DSM 2638 8093061 YP_002991033.1 CDS Desal_1432 NC_012881.1 1566299 1566898 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pmr:PMI2455 plasmid-related glycin-rich membrane protein; XRE family transcriptional regulator 1566299..1566898 Desulfovibrio salexigens DSM 2638 8093062 YP_002991034.1 CDS Desal_1433 NC_012881.1 1566913 1567257 D hypothetical protein 1566913..1567257 Desulfovibrio salexigens DSM 2638 8093063 YP_002991035.1 CDS Desal_1434 NC_012881.1 1567521 1567976 D KEGG: ect:ECIAI39_2677 hypothetical protein from phage origin; hypothetical protein 1567521..1567976 Desulfovibrio salexigens DSM 2638 8093064 YP_002991036.1 CDS Desal_1435 NC_012881.1 1567995 1568387 D KEGG: ppr:PBPRB0571 hypothetical protein; hypothetical protein 1567995..1568387 Desulfovibrio salexigens DSM 2638 8093065 YP_002991037.1 CDS Desal_1436 NC_012881.1 1568400 1568597 D hypothetical protein 1568400..1568597 Desulfovibrio salexigens DSM 2638 8093066 YP_002991038.1 CDS Desal_1437 NC_012881.1 1568680 1569588 R PFAM: UspA domain protein; KEGG: pca:Pcar_2623 universal stress protein; UspA domain-containing protein complement(1568680..1569588) Desulfovibrio salexigens DSM 2638 8093067 YP_002991039.1 CDS Desal_1438 NC_012881.1 1569614 1570117 R KEGG: tmz:Tmz1t_0612 membrane protein; hypothetical protein complement(1569614..1570117) Desulfovibrio salexigens DSM 2638 8093068 YP_002991040.1 CDS Desal_1439 NC_012881.1 1570289 1572607 D KEGG: dvm:DvMF_1089 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1570289..1572607 Desulfovibrio salexigens DSM 2638 8093069 YP_002991041.1 CDS Desal_1440 NC_012881.1 1572746 1573339 D KEGG: dvm:DvMF_1066 hypothetical protein; hypothetical protein 1572746..1573339 Desulfovibrio salexigens DSM 2638 8093070 YP_002991042.1 CDS Desal_1441 NC_012881.1 1573342 1575438 D KEGG: dvm:DvMF_1065 hypothetical protein; hypothetical protein 1573342..1575438 Desulfovibrio salexigens DSM 2638 8093071 YP_002991043.1 CDS Desal_1442 NC_012881.1 1575435 1575932 D KEGG: ecv:APECO1_4050 hypothetical protein; hypothetical protein 1575435..1575932 Desulfovibrio salexigens DSM 2638 8093072 YP_002991044.1 CDS Desal_1443 NC_012881.1 1575934 1576704 D KEGG: GF19556 gene product from transcript GF19556-RA; hypothetical protein 1575934..1576704 Desulfovibrio salexigens DSM 2638 8093073 YP_002991045.1 CDS Desal_1444 NC_012881.1 1576830 1580558 D KEGG: lhk:LHK_01555 hypothetical protein; hypothetical protein 1576830..1580558 Desulfovibrio salexigens DSM 2638 8093074 YP_002991046.1 CDS Desal_1445 NC_012881.1 1580558 1580782 D hypothetical protein 1580558..1580782 Desulfovibrio salexigens DSM 2638 8093075 YP_002991047.1 CDS Desal_1446 NC_012881.1 1580825 1581811 R KEGG: dal:Dalk_3866 hypothetical protein; hypothetical protein complement(1580825..1581811) Desulfovibrio salexigens DSM 2638 8093076 YP_002991048.1 CDS Desal_1447 NC_012881.1 1581963 1583228 D PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: gme:Gmet_0842 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 1581963..1583228 Desulfovibrio salexigens DSM 2638 8093077 YP_002991049.1 CDS Desal_1448 NC_012881.1 1583225 1583824 D hypothetical protein 1583225..1583824 Desulfovibrio salexigens DSM 2638 8093078 YP_002991050.1 CDS Desal_1449 NC_012881.1 1583832 1584581 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: gme:Gmet_0844 UbiE/COQ5 methyltransferase; methyltransferase type 11 1583832..1584581 Desulfovibrio salexigens DSM 2638 8093079 YP_002991051.1 CDS Desal_1450 NC_012881.1 1584676 1585356 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dvm:DvMF_2848 CBS domain containing membrane protein; hypothetical protein 1584676..1585356 Desulfovibrio salexigens DSM 2638 8093080 YP_002991052.1 CDS Desal_1451 NC_012881.1 1585412 1585828 R hypothetical protein complement(1585412..1585828) Desulfovibrio salexigens DSM 2638 8093081 YP_002991053.1 CDS Desal_1452 NC_012881.1 1585861 1586118 R KEGG: fam184a, si:dkey-238k23.1; family with sequence similarity 184, member A; hypothetical protein complement(1585861..1586118) Desulfovibrio salexigens DSM 2638 8093082 YP_002991054.1 CDS Desal_1453 NC_012881.1 1586337 1587491 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: dvu:DVU2968 sensor histidine kinase/response regulator; response regulator receiver sensor signal transduction histidine kinase 1586337..1587491 Desulfovibrio salexigens DSM 2638 8093083 YP_002991055.1 CDS Desal_1454 NC_012881.1 1587512 1589083 D PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; SMART: metal-dependent phosphohydrolase HD region; response regulator receiver; KEGG: dde:Dde_3114 metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 1587512..1589083 Desulfovibrio salexigens DSM 2638 8093084 YP_002991056.1 CDS Desal_1455 NC_012881.1 1589125 1589712 R PFAM: protein of unknown function DUF205; KEGG: dde:Dde_0172 acyl-phosphate glycerol-3-phosphate acyltransferase; hypothetical protein complement(1589125..1589712) Desulfovibrio salexigens DSM 2638 8093085 YP_002991057.1 CDS Desal_1456 NC_012881.1 1589920 1591983 R PFAM: ribonuclease II; KEGG: dde:Dde_0173 RNB-like family protein; ribonuclease II complement(1589920..1591983) Desulfovibrio salexigens DSM 2638 8093086 YP_002991058.1 CDS Desal_1457 NC_012881.1 1592295 1593569 R KEGG: dde:Dde_0174 phosphoribosylaminoimidazolecarboxamide formyltransferase; PFAM: AICARFT/IMPCHase bienzyme formylation region; SMART: AICARFT/IMPCHase bienzyme formylation region; IMP cyclohydrolase complement(1592295..1593569) Desulfovibrio salexigens DSM 2638 8093087 YP_002991059.1 CDS Desal_1458 NC_012881.1 1593746 1594117 D KEGG: dvm:DvMF_1941 hypothetical protein; hypothetical protein 1593746..1594117 Desulfovibrio salexigens DSM 2638 8093088 YP_002991060.1 CDS Desal_1459 NC_012881.1 1594058 1595539 R PFAM: lytic transglycosylase catalytic; KEGG: dde:Dde_0175 transglycosylase SLT domain-containing protein; lytic transglycosylase complement(1594058..1595539) Desulfovibrio salexigens DSM 2638 8093089 YP_002991061.1 CDS Desal_1460 NC_012881.1 1595774 1597054 D KEGG: dvl:Dvul_0183 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase; adenylosuccinate synthetase 1595774..1597054 Desulfovibrio salexigens DSM 2638 8093090 YP_002991062.1 CDS Desal_1461 NC_012881.1 1597160 1598026 D KEGG: dde:Dde_0177 DNA polymerase III, delta prime subunit; DNA polymerase III, delta prime subunit 1597160..1598026 Desulfovibrio salexigens DSM 2638 8091286 YP_002991063.1 CDS Desal_1462 NC_012881.1 1598179 1598646 D PFAM: GCN5-related N-acetyltransferase; KEGG: dde:Dde_0792 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 1598179..1598646 Desulfovibrio salexigens DSM 2638 8093497 YP_002991064.1 CDS Desal_1463 NC_012881.1 1598665 1600158 R PFAM: peptidase S41; SMART: peptidase S41; KEGG: sdn:Sden_0954 peptidase S41; peptidase S41 complement(1598665..1600158) Desulfovibrio salexigens DSM 2638 8093498 YP_002991065.1 CDS Desal_1464 NC_012881.1 1600180 1600959 R PFAM: extracellular solute-binding protein family 3; KEGG: dvm:DvMF_0180 hypothetical protein; family 3 extracellular solute-binding protein complement(1600180..1600959) Desulfovibrio salexigens DSM 2638 8093499 YP_002991066.1 CDS Desal_1465 NC_012881.1 1601684 1602694 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: dat:HRM2_12470 LldD; FMN-dependent alpha-hydroxy acid dehydrogenase complement(1601684..1602694) Desulfovibrio salexigens DSM 2638 8093500 YP_002991067.1 CDS Desal_1466 NC_012881.1 1602710 1603507 R PFAM: protein of unknown function DUF81; KEGG: dde:Dde_0751 hypothetical protein; hypothetical protein complement(1602710..1603507) Desulfovibrio salexigens DSM 2638 8093501 YP_002991068.1 CDS Desal_1467 NC_012881.1 1603536 1604234 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sfu:Sfum_1522 GntR domain protein; GntR family transcriptional regulator complement(1603536..1604234) Desulfovibrio salexigens DSM 2638 8093502 YP_002991069.1 CDS Desal_1468 NC_012881.1 1604376 1605026 R PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: sfu:Sfum_2000 fumarate reductase respiratory complex, transmembrane subunit; fumarate reductase respiratory complex transmembrane subunit complement(1604376..1605026) Desulfovibrio salexigens DSM 2638 8093503 YP_002991070.1 CDS Desal_1469 NC_012881.1 1605360 1608188 D PFAM: peptidase M16 domain protein; KEGG: dvu:DVU1430 M16 family peptidase; peptidase M16 domain-containing protein 1605360..1608188 Desulfovibrio salexigens DSM 2638 8093504 YP_002991071.1 CDS Desal_1470 NC_012881.1 1608234 1608863 R PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: esa:ESA_03712 hypothetical protein; hypothetical protein complement(1608234..1608863) Desulfovibrio salexigens DSM 2638 8093505 YP_002991072.1 CDS Desal_1471 NC_012881.1 1609049 1609393 D KEGG: dds:Ddes_1704 hypothetical protein; hypothetical protein 1609049..1609393 Desulfovibrio salexigens DSM 2638 8093506 YP_002991073.1 CDS Desal_1472 NC_012881.1 1609541 1611520 D KEGG: dvl:Dvul_1570 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 1609541..1611520 Desulfovibrio salexigens DSM 2638 8093507 YP_002991074.1 CDS Desal_1473 NC_012881.1 1611731 1612921 D PFAM: aminotransferase class I and II; KEGG: dvm:DvMF_3003 transcriptional regulator, GntR family; GntR family transcriptional regulator 1611731..1612921 Desulfovibrio salexigens DSM 2638 8093508 YP_002991075.1 CDS Desal_1474 NC_012881.1 1613000 1614721 R KEGG: dde:Dde_2814 methyl-accepting chemotaxis sensory transducer; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1613000..1614721) Desulfovibrio salexigens DSM 2638 8093509 YP_002991076.1 CDS Desal_1475 NC_012881.1 1614882 1615814 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo2419 LysR-type transcriptional regulator NahR; LysR family transcriptional regulator complement(1614882..1615814) Desulfovibrio salexigens DSM 2638 8093510 YP_002991077.1 CDS Desal_1476 NC_012881.1 1615909 1616346 D hypothetical protein 1615909..1616346 Desulfovibrio salexigens DSM 2638 8093511 YP_002991078.1 CDS Desal_1477 NC_012881.1 1616361 1617131 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: pfs:PFLU5723 hypothetical protein; family 3 extracellular solute-binding protein complement(1616361..1617131) Desulfovibrio salexigens DSM 2638 8093512 YP_002991079.1 CDS Desal_1478 NC_012881.1 1617203 1618114 R PFAM: phosphate acetyl/butaryl transferase; KEGG: dde:Dde_3129 phosphate butyryltransferase; Phosphate butyryltransferase complement(1617203..1618114) Desulfovibrio salexigens DSM 2638 8093513 YP_002991080.1 CDS Desal_1479 NC_012881.1 1618180 1618659 R TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: dde:Dde_3130 acetolactate synthase, small subunit; acetolactate synthase small subunit complement(1618180..1618659) Desulfovibrio salexigens DSM 2638 8093514 YP_002991081.1 CDS Desal_1480 NC_012881.1 1618758 1621880 R KEGG: dvm:DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(1618758..1621880) Desulfovibrio salexigens DSM 2638 8093515 YP_002991082.1 CDS Desal_1481 NC_012881.1 1621968 1624169 R PFAM: transglutaminase; SMART: transglutaminase; KEGG: hypothetical protein; transglutaminase complement(1621968..1624169) Desulfovibrio salexigens DSM 2638 8093516 YP_002991083.1 CDS Desal_1482 NC_012881.1 1624270 1624584 R KEGG: dds:Ddes_0909 HesB/YadR/YfhF-family protein; HesB/YadR/YfhF-family protein complement(1624270..1624584) Desulfovibrio salexigens DSM 2638 8093517 YP_002991084.1 CDS Desal_1483 NC_012881.1 1624737 1625573 R PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4095 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1624737..1625573) Desulfovibrio salexigens DSM 2638 8093518 YP_002991085.1 CDS Desal_1484 NC_012881.1 1625584 1625976 R PFAM: cupin; KEGG: dal:Dalk_4094 cupin 2 domain-containing protein; cupin complement(1625584..1625976) Desulfovibrio salexigens DSM 2638 8093519 YP_002991086.1 CDS Desal_1485 NC_012881.1 1626133 1626528 R PFAM: OsmC family protein; KEGG: dvm:DvMF_3179 OsmC family protein; OsmC family protein complement(1626133..1626528) Desulfovibrio salexigens DSM 2638 8093520 YP_002991087.1 CDS Desal_1486 NC_012881.1 1626657 1627118 R PFAM: protein of unknown function UPF0153; KEGG: dps:DP2528 hypothetical protein; hypothetical protein complement(1626657..1627118) Desulfovibrio salexigens DSM 2638 8093521 YP_002991088.1 CDS Desal_1487 NC_012881.1 1627159 1627614 R PFAM: GtrA family protein; KEGG: azo:azo0751 hypothetical protein; GtrA family protein complement(1627159..1627614) Desulfovibrio salexigens DSM 2638 8093522 YP_002991089.1 CDS Desal_1488 NC_012881.1 1628122 1629432 D KEGG: pmy:Pmen_3647 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; response regulator receiver; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein; response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor 1628122..1629432 Desulfovibrio salexigens DSM 2638 8093523 YP_002991090.1 CDS Desal_1489 NC_012881.1 1630014 1630391 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: dvm:DvMF_1593 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 1630014..1630391 Desulfovibrio salexigens DSM 2638 8093524 YP_002991091.1 CDS Desal_1490 NC_012881.1 1630370 1630909 D KEGG: dvm:DvMF_1594 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 1630370..1630909 Desulfovibrio salexigens DSM 2638 8093525 YP_002991092.1 CDS Desal_1491 NC_012881.1 1630906 1631439 D PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: dvm:DvMF_1595 NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 1630906..1631439 Desulfovibrio salexigens DSM 2638 8093526 YP_002991093.1 CDS Desal_1492 NC_012881.1 1631436 1632587 D PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dvm:DvMF_1596 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1631436..1632587 Desulfovibrio salexigens DSM 2638 8093527 YP_002991094.1 CDS Desal_1493 NC_012881.1 1632601 1633569 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dvm:DvMF_1597 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1632601..1633569 Desulfovibrio salexigens DSM 2638 8093528 YP_002991095.1 CDS Desal_1494 NC_012881.1 1633583 1634188 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvm:DvMF_1598 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1633583..1634188 Desulfovibrio salexigens DSM 2638 8093529 YP_002991096.1 CDS Desal_1495 NC_012881.1 1634185 1634709 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: dvm:DvMF_1599 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1634185..1634709 Desulfovibrio salexigens DSM 2638 8093530 YP_002991097.1 CDS Desal_1496 NC_012881.1 1634709 1635017 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: dvm:DvMF_1600 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase chain 4L 1634709..1635017 Desulfovibrio salexigens DSM 2638 8093531 YP_002991098.1 CDS Desal_1497 NC_012881.1 1635022 1636515 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 1635022..1636515 Desulfovibrio salexigens DSM 2638 8093532 YP_002991099.1 CDS Desal_1498 NC_012881.1 1636527 1636811 D KEGG: dvm:DvMF_1602 hypothetical protein; hypothetical protein 1636527..1636811 Desulfovibrio salexigens DSM 2638 8093533 YP_002991100.1 CDS Desal_1499 NC_012881.1 1636801 1638573 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit D 1636801..1638573 Desulfovibrio salexigens DSM 2638 8093534 YP_002991101.1 CDS Desal_1500 NC_012881.1 1638589 1640124 D KEGG: dvm:DvMF_1604 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1638589..1640124 Desulfovibrio salexigens DSM 2638 8093535 YP_002991102.1 CDS Desal_1501 NC_012881.1 1640143 1641564 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvm:DvMF_1605 NADH dehydrogenase (quinone); NADH/ubiquinone/plastoquinone 1640143..1641564 Desulfovibrio salexigens DSM 2638 8093536 YP_002991103.1 CDS Desal_1502 NC_012881.1 1641630 1642757 R KEGG: sbm:Shew185_3374 hypothetical protein; hypothetical protein complement(1641630..1642757) Desulfovibrio salexigens DSM 2638 8093537 YP_002991104.1 CDS Desal_1503 NC_012881.1 1643033 1645162 R TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; KEGG: dps:DP0143 ferrous iron transport protein B; ferrous iron transport protein B complement(1643033..1645162) Desulfovibrio salexigens DSM 2638 8093538 YP_002991105.1 CDS Desal_1504 NC_012881.1 1645165 1645401 R PFAM: FeoA family protein; KEGG: dps:DP0142 ferrous ion transport protein A; FeoA family protein complement(1645165..1645401) Desulfovibrio salexigens DSM 2638 8093539 YP_002991106.1 CDS Desal_1505 NC_012881.1 1645520 1646047 R hypothetical protein complement(1645520..1646047) Desulfovibrio salexigens DSM 2638 8093540 YP_002991107.1 CDS Desal_1506 NC_012881.1 1646495 1647058 D KEGG: dde:Dde_0523 hypothetical protein; hypothetical protein 1646495..1647058 Desulfovibrio salexigens DSM 2638 8093541 YP_002991108.1 CDS Desal_1507 NC_012881.1 1647137 1648015 R PFAM: alpha/beta hydrolase fold; KEGG: vsp:VS_1761 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1647137..1648015) Desulfovibrio salexigens DSM 2638 8093542 YP_002991109.1 CDS Desal_1508 NC_012881.1 1648277 1648813 D KEGG: bxe:Bxe_B2245 hypothetical protein; hypothetical protein 1648277..1648813 Desulfovibrio salexigens DSM 2638 8093543 YP_002991110.1 CDS Desal_1509 NC_012881.1 1648969 1649628 R KEGG: cti:RALTA_B1096 hypothetical protein; anhydrase/acetyltransferase motif; acetyltransferase (isoleucine patch superfamily)-like protein complement(1648969..1649628) Desulfovibrio salexigens DSM 2638 8093544 YP_002991111.1 CDS Desal_1510 NC_012881.1 1649922 1651520 R PFAM: Na+/solute symporter; KEGG: dde:Dde_1337 sodium/proline symporter (proline permease); Na+/solute symporter complement(1649922..1651520) Desulfovibrio salexigens DSM 2638 8093545 YP_002991112.1 CDS Desal_1511 NC_012881.1 1651520 1651681 R KEGG: dde:Dde_1338 hypothetical protein; hypothetical protein complement(1651520..1651681) Desulfovibrio salexigens DSM 2638 8093546 YP_002991113.1 CDS Desal_1512 NC_012881.1 1652173 1653519 D converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1652173..1653519 Desulfovibrio salexigens DSM 2638 8093547 YP_002991114.1 CDS Desal_1513 NC_012881.1 1653638 1656616 D KEGG: dat:HRM2_03270 PpsA1; PpsA1 protein 1653638..1656616 Desulfovibrio salexigens DSM 2638 8093548 YP_002991115.1 CDS Desal_1514 NC_012881.1 1656868 1657272 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dat:HRM2_41220 RsbV; anti-sigma-factor antagonist 1656868..1657272 Desulfovibrio salexigens DSM 2638 8093549 YP_002991116.1 CDS Desal_1515 NC_012881.1 1657387 1657863 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dat:HRM2_04340 predicted anti-sigma factor antagonist RsbV (anti-anti-sigma-B factor); anti-sigma-factor antagonist 1657387..1657863 Desulfovibrio salexigens DSM 2638 8093550 YP_002991117.1 CDS Desal_1516 NC_012881.1 1657930 1661013 R PFAM: acriflavin resistance protein; KEGG: dvm:DvMF_1515 acriflavin resistance protein; acriflavin resistance protein complement(1657930..1661013) Desulfovibrio salexigens DSM 2638 8093551 YP_002991118.1 CDS Desal_1517 NC_012881.1 1661016 1662185 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gbm:Gbem_0064 efflux transporter RND family, MFP subunit; RND family efflux transporter MFP subunit complement(1661016..1662185) Desulfovibrio salexigens DSM 2638 8093552 YP_002991119.1 CDS Desal_1518 NC_012881.1 1662415 1664217 D TIGRFAM: degV family protein; PFAM: DegV family protein; Dak phosphatase; KEGG: dvu:DVU1942 DAK2 and DegV domain-containing protein; degV family protein 1662415..1664217 Desulfovibrio salexigens DSM 2638 8093553 YP_002991120.1 CDS Desal_1519 NC_012881.1 1664918 1665646 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_1428 ATPase; ABC transporter 1664918..1665646 Desulfovibrio salexigens DSM 2638 8093554 YP_002991121.1 CDS Desal_1520 NC_012881.1 1665704 1666519 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dde:Dde_1429 extracellular solute-binding protein; family 3 extracellular solute-binding protein 1665704..1666519 Desulfovibrio salexigens DSM 2638 8093555 YP_002991122.1 CDS Desal_1521 NC_012881.1 1666639 1667340 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0918 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease 1666639..1667340 Desulfovibrio salexigens DSM 2638 8093556 YP_002991123.1 CDS Desal_1522 NC_012881.1 1667353 1668048 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_0919 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease 1667353..1668048 Desulfovibrio salexigens DSM 2638 8093557 YP_002991124.1 CDS Desal_1523 NC_012881.1 1668249 1668902 D KEGG: mxa:MXAN_5719 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 1668249..1668902 Desulfovibrio salexigens DSM 2638 8093558 YP_002991125.1 CDS Desal_1524 NC_012881.1 1668906 1669580 D PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: dde:Dde_0342 precorrin-8X methylmutase; precorrin-8X methylmutase 1668906..1669580 Desulfovibrio salexigens DSM 2638 8093559 YP_002991126.1 CDS Desal_1525 NC_012881.1 1669697 1672513 D KEGG: dde:Dde_1351 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1669697..1672513 Desulfovibrio salexigens DSM 2638 8093560 YP_002991127.1 CDS Desal_1526 NC_012881.1 1672872 1673264 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvm:DvMF_0602 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1672872..1673264 Desulfovibrio salexigens DSM 2638 8093561 YP_002991128.1 CDS Desal_1527 NC_012881.1 1673276 1674427 D PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: dvl:Dvul_1223 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1673276..1674427 Desulfovibrio salexigens DSM 2638 8093562 YP_002991129.1 CDS Desal_1528 NC_012881.1 1674430 1675266 D catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1674430..1675266 Desulfovibrio salexigens DSM 2638 8093563 YP_002991130.1 CDS Desal_1529 NC_012881.1 1675266 1675889 D PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dde:Dde_1637 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit; pyruvate ferredoxin/flavodoxin oxidoreductase 1675266..1675889 Desulfovibrio salexigens DSM 2638 8093564 YP_002991131.1 CDS Desal_1530 NC_012881.1 1675944 1676528 R hypothetical protein complement(1675944..1676528) Desulfovibrio salexigens DSM 2638 8093565 YP_002991132.1 CDS Desal_1531 NC_012881.1 1676532 1678100 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: GAF domain protein; ATPase AAA; KEGG: dde:Dde_1635 Fis family transcriptional regulator; Fis family transcriptional regulator complement(1676532..1678100) Desulfovibrio salexigens DSM 2638 8093566 YP_002991133.1 CDS Desal_1532 NC_012881.1 1678275 1678862 R PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dvl:Dvul_1218 indolepyruvate ferredoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase complement(1678275..1678862) Desulfovibrio salexigens DSM 2638 8093567 YP_002991134.1 CDS Desal_1533 NC_012881.1 1678862 1680706 R TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: dvm:DvMF_0610 indolepyruvate ferredoxin oxidoreductase, alpha subunit; indolepyruvate ferredoxin oxidoreductase subunit alpha complement(1678862..1680706) Desulfovibrio salexigens DSM 2638 8093568 YP_002991135.1 CDS Desal_1534 NC_012881.1 1680860 1681510 R KEGG: dvm:DvMF_0611 hypothetical protein; hypothetical protein complement(1680860..1681510) Desulfovibrio salexigens DSM 2638 8093569 YP_002991136.1 CDS proA NC_012881.1 1681819 1683078 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1681819..1683078 Desulfovibrio salexigens DSM 2638 8093570 YP_002991137.1 CDS Desal_1536 NC_012881.1 1683150 1683800 D KEGG: dvl:Dvul_1214 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 1683150..1683800 Desulfovibrio salexigens DSM 2638 8093571 YP_002991138.1 CDS Desal_1537 NC_012881.1 1683903 1684916 R PFAM: glycosyl transferase family 9; KEGG: dvu:DVU1956 heptosyltransferase family protein; glycosyl transferase family protein complement(1683903..1684916) Desulfovibrio salexigens DSM 2638 8093572 YP_002991139.1 CDS Desal_1538 NC_012881.1 1685170 1686231 D PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: dvm:DvMF_3134 protein of unknown function DUF21; hypothetical protein 1685170..1686231 Desulfovibrio salexigens DSM 2638 8093573 YP_002991140.1 CDS Desal_1539 NC_012881.1 1686245 1686661 D KEGG: dvm:DvMF_3133 cytochrome c-type biogenesis protein CcmE; cytochrome c-type biogenesis protein CcmE 1686245..1686661 Desulfovibrio salexigens DSM 2638 8093574 YP_002991141.1 CDS Desal_1540 NC_012881.1 1686743 1688620 D PFAM: cytochrome c assembly protein; KEGG: dde:Dde_1477 cytochrome c-type biogenesis protein CcmF; cytochrome c assembly protein 1686743..1688620 Desulfovibrio salexigens DSM 2638 8093575 YP_002991142.1 CDS Desal_1541 NC_012881.1 1688631 1689311 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvm:DvMF_3131 ABC transporter; ABC transporter 1688631..1689311 Desulfovibrio salexigens DSM 2638 8093576 YP_002991143.1 CDS Desal_1542 NC_012881.1 1689304 1689981 D PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: dvm:DvMF_3130 cytochrome c-type biogenesis protein CcmB; cytochrome c-type biogenesis protein CcmB 1689304..1689981 Desulfovibrio salexigens DSM 2638 8093770 YP_002991144.1 CDS Desal_1543 NC_012881.1 1690016 1690681 D PFAM: cytochrome c assembly protein; KEGG: dde:Dde_1474 cytochrome c-type biogenesis protein CcmC; cytochrome c assembly protein 1690016..1690681 Desulfovibrio salexigens DSM 2638 8093771 YP_002991145.1 CDS Desal_1544 NC_012881.1 1690851 1690991 D KEGG: dvm:DvMF_3128 hypothetical protein; hypothetical protein 1690851..1690991 Desulfovibrio salexigens DSM 2638 8093772 YP_002991146.1 CDS Desal_1545 NC_012881.1 1690981 1691604 D PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dvm:DvMF_3127 hypothetical protein; hypothetical protein 1690981..1691604 Desulfovibrio salexigens DSM 2638 8093773 YP_002991147.1 CDS Desal_1546 NC_012881.1 1692084 1693199 D PFAM: extracellular ligand-binding receptor; KEGG: dde:Dde_0612 high-affinity branched chain amino acid ABC transporter periplasmic branched chain amino acid-binding protein; extracellular ligand-binding receptor 1692084..1693199 Desulfovibrio salexigens DSM 2638 8093774 YP_002991148.1 CDS Desal_1547 NC_012881.1 1693276 1694178 D PFAM: inner-membrane translocator; KEGG: dvm:DvMF_2608 inner-membrane translocator; inner-membrane translocator 1693276..1694178 Desulfovibrio salexigens DSM 2638 8093775 YP_002991149.1 CDS Desal_1548 NC_012881.1 1694247 1695470 D PFAM: inner-membrane translocator; KEGG: dat:HRM2_02770 LivM1; inner-membrane translocator 1694247..1695470 Desulfovibrio salexigens DSM 2638 8093776 YP_002991150.1 CDS Desal_1549 NC_012881.1 1695463 1696266 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvl:Dvul_2394 ABC transporter; ABC transporter 1695463..1696266 Desulfovibrio salexigens DSM 2638 8093777 YP_002991151.1 CDS Desal_1550 NC_012881.1 1696259 1696966 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvm:DvMF_2611 ABC transporter; ABC transporter 1696259..1696966 Desulfovibrio salexigens DSM 2638 8093778 YP_002991152.1 CDS Desal_1551 NC_012881.1 1697354 1698811 D KEGG: dvm:DvMF_3126 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein; inosine-5'-monophosphate dehydrogenase 1697354..1698811 Desulfovibrio salexigens DSM 2638 8093779 YP_002991153.1 CDS guaA NC_012881.1 1698824 1700371 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1698824..1700371 Desulfovibrio salexigens DSM 2638 8093780 YP_002991154.1 CDS Desal_1553 NC_012881.1 1700751 1701089 D TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: gbm:Gbem_3518 twin-arginine translocation protein, TatA/E family subunit; twin-arginine translocation protein subunit TatB 1700751..1701089 Desulfovibrio salexigens DSM 2638 8093781 YP_002991155.1 CDS Desal_1554 NC_012881.1 1701086 1702246 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: dde:Dde_1468 sec-independent protein translocase TatC; Sec-independent protein translocase subunit TatC 1701086..1702246 Desulfovibrio salexigens DSM 2638 8093782 YP_002991156.1 CDS Desal_1555 NC_012881.1 1702283 1702870 D PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: dvm:DvMF_3122 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1702283..1702870 Desulfovibrio salexigens DSM 2638 8093783 YP_002991157.1 CDS Desal_1556 NC_012881.1 1702870 1703526 D KEGG: dde:Dde_1466 lipoprotein; lipoprotein 1702870..1703526 Desulfovibrio salexigens DSM 2638 8093784 YP_002991158.1 CDS Desal_1557 NC_012881.1 1703523 1704251 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1703523..1704251 Desulfovibrio salexigens DSM 2638 8093785 YP_002991159.1 CDS Desal_1558 NC_012881.1 1704369 1704575 D PFAM: heavy metal transport/detoxification protein; KEGG: dde:Dde_1312 mercuric transport protein periplasmic component; heavy metal transport/detoxification protein 1704369..1704575 Desulfovibrio salexigens DSM 2638 8093786 YP_002991160.1 CDS Desal_1559 NC_012881.1 1704750 1705943 D PFAM: aminotransferase class-III; KEGG: dal:Dalk_4472 aminotransferase class-III; class III aminotransferase 1704750..1705943 Desulfovibrio salexigens DSM 2638 8093787 YP_002991161.1 CDS Desal_1560 NC_012881.1 1706017 1707507 R KEGG: spl:Spea_0811 hypothetical protein; hypothetical protein complement(1706017..1707507) Desulfovibrio salexigens DSM 2638 8093788 YP_002991162.1 CDS Desal_1561 NC_012881.1 1707507 1707668 R hypothetical protein complement(1707507..1707668) Desulfovibrio salexigens DSM 2638 8093789 YP_002991163.1 CDS Desal_1562 NC_012881.1 1707937 1708200 R PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: nis:NIS_0278 RNA-binding protein RNP-1; RNP-1 like RNA-binding protein complement(1707937..1708200) Desulfovibrio salexigens DSM 2638 8093790 YP_002991164.1 CDS gatA NC_012881.1 1708573 1710036 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1708573..1710036) Desulfovibrio salexigens DSM 2638 8093791 YP_002991165.1 CDS Desal_1564 NC_012881.1 1710059 1710352 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: dvl:Dvul_2168 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C complement(1710059..1710352) Desulfovibrio salexigens DSM 2638 8093792 YP_002991166.1 CDS Desal_1565 NC_012881.1 1710634 1712703 R KEGG: dde:Dde_1022 hypothetical protein; hypothetical protein complement(1710634..1712703) Desulfovibrio salexigens DSM 2638 8093793 YP_002991167.1 CDS dnaK NC_012881.1 1712842 1714758 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1712842..1714758) Desulfovibrio salexigens DSM 2638 8093794 YP_002991168.1 CDS Desal_1567 NC_012881.1 1714847 1715425 R PFAM: GrpE protein; KEGG: dde:Dde_1025 heat shock protein GrpE; GrpE protein HSP-70 cofactor complement(1714847..1715425) Desulfovibrio salexigens DSM 2638 8093795 YP_002991169.1 CDS Desal_1568 NC_012881.1 1715569 1716780 R KEGG: dol:Dole_2013 peptidase M29 aminopeptidase II; peptidase M29 aminopeptidase II complement(1715569..1716780) Desulfovibrio salexigens DSM 2638 8093796 YP_002991170.1 CDS Desal_1569 NC_012881.1 1717069 1717302 D PFAM: FeoA family protein; KEGG: pca:Pcar_0883 Fe2+ transport system protein A; FeoA family protein 1717069..1717302 Desulfovibrio salexigens DSM 2638 8093797 YP_002991171.1 CDS Desal_1570 NC_012881.1 1717306 1719486 D TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: dde:Dde_2669 ferrous iron transport protein B; ferrous iron transport protein B 1717306..1719486 Desulfovibrio salexigens DSM 2638 8093798 YP_002991172.1 CDS Desal_1571 NC_012881.1 1719652 1719822 R KEGG: dvm:DvMF_2088 hypothetical protein; hypothetical protein complement(1719652..1719822) Desulfovibrio salexigens DSM 2638 8093799 YP_002991173.1 CDS Desal_1572 NC_012881.1 1719953 1722574 R KEGG: dvm:DvMF_0567 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; ATPase AAA complement(1719953..1722574) Desulfovibrio salexigens DSM 2638 8093800 YP_002991174.1 CDS Desal_1573 NC_012881.1 1722764 1723078 R KEGG: lip:LI0125 hypothetical protein; hypothetical protein complement(1722764..1723078) Desulfovibrio salexigens DSM 2638 8093801 YP_002991175.1 CDS Desal_1574 NC_012881.1 1723091 1724086 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: dvl:Dvul_1288 chaperone DnaJ domain-containing protein; heat shock protein DnaJ domain-containing protein complement(1723091..1724086) Desulfovibrio salexigens DSM 2638 8093802 YP_002991176.1 CDS Desal_1575 NC_012881.1 1724261 1724992 R PFAM: Rhomboid family protein; KEGG: dde:Dde_1446 rhomboid family protein; rhomboid family protein complement(1724261..1724992) Desulfovibrio salexigens DSM 2638 8093803 YP_002991177.1 CDS Desal_1576 NC_012881.1 1725348 1726997 R KEGG: dde:Dde_1447 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; dephospho-CoA kinase; PFAM: pseudouridine synthase; Dephospho-CoA kinase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase complement(1725348..1726997) Desulfovibrio salexigens DSM 2638 8093804 YP_002991178.1 CDS Desal_1577 NC_012881.1 1727195 1727821 D KEGG: dat:HRM2_05330 Upp; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 1727195..1727821 Desulfovibrio salexigens DSM 2638 8093805 YP_002991179.1 CDS Desal_1578 NC_012881.1 1727883 1729136 D TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: dat:HRM2_05320 UraA; uracil-xanthine permease 1727883..1729136 Desulfovibrio salexigens DSM 2638 8093806 YP_002991180.1 CDS Desal_1579 NC_012881.1 1729328 1730410 D PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: dvm:DvMF_2839 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1729328..1730410 Desulfovibrio salexigens DSM 2638 8093807 YP_002991181.1 CDS Desal_1580 NC_012881.1 1730429 1731010 D PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3580 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1730429..1731010 Desulfovibrio salexigens DSM 2638 8093808 YP_002991182.1 CDS Desal_1581 NC_012881.1 1731273 1732040 D TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dvm:DvMF_1790 CDP-diacylglycerol/serine O-phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 1731273..1732040 Desulfovibrio salexigens DSM 2638 8093809 YP_002991183.1 CDS Desal_1582 NC_012881.1 1732214 1733761 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1732214..1733761 Desulfovibrio salexigens DSM 2638 8093810 YP_002991184.1 CDS Desal_1583 NC_012881.1 1733754 1735013 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 1733754..1735013 Desulfovibrio salexigens DSM 2638 8093811 YP_002991185.1 CDS leuD NC_012881.1 1735032 1735526 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase small subunit 1735032..1735526 Desulfovibrio salexigens DSM 2638 8093812 YP_002991186.1 CDS Desal_1585 NC_012881.1 1735705 1736772 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1735705..1736772 Desulfovibrio salexigens DSM 2638 8093813 YP_002991187.1 CDS Desal_1586 NC_012881.1 1737016 1737573 D PFAM: GCN5-related N-acetyltransferase; KEGG: psa:PST_2698 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1737016..1737573 Desulfovibrio salexigens DSM 2638 8093814 YP_002991188.1 CDS Desal_1587 NC_012881.1 1737733 1738227 D PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dol:Dole_0581 dinitrogenase iron-molybdenum cofactor biosynthesis protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 1737733..1738227 Desulfovibrio salexigens DSM 2638 8093815 YP_002991189.1 CDS Desal_1588 NC_012881.1 1738317 1739195 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(1738317..1739195) Desulfovibrio salexigens DSM 2638 8093816 YP_002991190.1 CDS Desal_1589 NC_012881.1 1739217 1739924 R KEGG: dvm:DvMF_0560 hypothetical protein; hypothetical protein complement(1739217..1739924) Desulfovibrio salexigens DSM 2638 8093817 YP_002991191.1 CDS Desal_1590 NC_012881.1 1740104 1740379 R PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: dvm:DvMF_0558 histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(1740104..1740379) Desulfovibrio salexigens DSM 2638 8093818 YP_002991192.1 CDS Desal_1591 NC_012881.1 1740474 1741298 R KEGG: dvm:DvMF_0557 flagellar synthesis regulator FleN; flagellar synthesis regulator FleN complement(1740474..1741298) Desulfovibrio salexigens DSM 2638 8093819 YP_002991193.1 CDS Desal_1592 NC_012881.1 1741374 1742225 R KEGG: dvm:DvMF_0556 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1741374..1742225) Desulfovibrio salexigens DSM 2638 8093820 YP_002991194.1 CDS Desal_1593 NC_012881.1 1742215 1743334 R hypothetical protein complement(join(1742215..1743285,1743287..1743334)) Desulfovibrio salexigens DSM 2638 8093821 YP_002991195.1 CDS Desal_1594 NC_012881.1 1743352 1744878 R TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dvl:Dvul_1303 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(1743352..1744878) Desulfovibrio salexigens DSM 2638 8093822 YP_002991196.1 CDS Desal_1595 NC_012881.1 1744880 1745698 R PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: dde:Dde_1807 CBS; hypothetical protein complement(1744880..1745698) Desulfovibrio salexigens DSM 2638 8093823 YP_002991197.1 CDS Desal_1596 NC_012881.1 1745802 1746836 R KEGG: dde:Dde_1808 hypothetical protein; hypothetical protein complement(1745802..1746836) Desulfovibrio salexigens DSM 2638 8093824 YP_002991198.1 CDS Desal_1597 NC_012881.1 1746932 1748815 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(1746932..1748815) Desulfovibrio salexigens DSM 2638 8093825 YP_002991199.1 CDS Desal_1598 NC_012881.1 1748833 1750053 R catalyzes the transamination of diaminopimelate with 2-oxoglutarate to produce tetrahydrodipicolinate and glutamate; diaminopimelate aminotransferase complement(1748833..1750053) Desulfovibrio salexigens DSM 2638 8093826 YP_002991200.1 CDS Desal_1599 NC_012881.1 1750324 1750614 R KEGG: dde:Dde_1811 hypothetical protein; hypothetical protein complement(1750324..1750614) Desulfovibrio salexigens DSM 2638 8093827 YP_002991201.1 CDS Desal_1600 NC_012881.1 1750762 1752090 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: dvu:DVU1825 amidohydrolase family protein; amidohydrolase complement(1750762..1752090) Desulfovibrio salexigens DSM 2638 8093828 YP_002991202.1 CDS Desal_1601 NC_012881.1 1752274 1753020 R TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: dol:Dole_2618 methylthioadenosine phosphorylase; methylthioadenosine phosphorylase complement(1752274..1753020) Desulfovibrio salexigens DSM 2638 8093829 YP_002991203.1 CDS Desal_1602 NC_012881.1 1753121 1753633 R TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: gme:Gmet_1422 adenine phosphoribosyltransferase; adenine phosphoribosyltransferase complement(1753121..1753633) Desulfovibrio salexigens DSM 2638 8093830 YP_002991204.1 CDS Desal_1603 NC_012881.1 1753791 1754255 R KEGG: dvm:DvMF_2464 hypothetical protein; hypothetical protein complement(1753791..1754255) Desulfovibrio salexigens DSM 2638 8093831 YP_002991205.1 CDS Desal_1604 NC_012881.1 1754349 1755659 R PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: gbm:Gbem_0540 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease complement(1754349..1755659) Desulfovibrio salexigens DSM 2638 8093832 YP_002991206.1 CDS ksgA NC_012881.1 1755809 1756597 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1755809..1756597 Desulfovibrio salexigens DSM 2638 8093833 YP_002991207.1 CDS Desal_1606 NC_012881.1 1756848 1757120 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: dde:Dde_2058 histone-like DNA-binding protein; histone family protein DNA-binding protein 1756848..1757120 Desulfovibrio salexigens DSM 2638 8093834 YP_002991208.1 CDS Desal_1607 NC_012881.1 1757138 1757314 D KEGG: dde:Dde_2057 hypothetical protein; hypothetical protein 1757138..1757314 Desulfovibrio salexigens DSM 2638 8093835 YP_002991209.1 CDS rpsU NC_012881.1 1757472 1757672 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1757472..1757672 Desulfovibrio salexigens DSM 2638 8093836 YP_002991210.1 CDS Desal_1609 NC_012881.1 1757676 1758122 D KEGG: dde:Dde_2055 GatB/YqeY family protein; GatB/YqeY family protein 1757676..1758122 Desulfovibrio salexigens DSM 2638 8093837 YP_002991211.1 CDS Desal_1610 NC_012881.1 1758250 1760559 D PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; MutS III domain protein; KEGG: dvl:Dvul_1368 Smr protein/MutS2; Smr protein/MutS2 1758250..1760559 Desulfovibrio salexigens DSM 2638 8093838 YP_002991212.1 CDS Desal_1611 NC_012881.1 1760659 1762398 D KEGG: dde:Dde_2053 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; DNA primase 1760659..1762398 Desulfovibrio salexigens DSM 2638 8093839 YP_002991213.1 CDS Desal_1612 NC_012881.1 1762385 1764142 D TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: dde:Dde_2052 sigma-70 factor; RpoD subfamily RNA polymerase sigma-70 subunit 1762385..1764142 Desulfovibrio salexigens DSM 2638 8093840 YP_002991214.1 CDS Desal_1613 NC_012881.1 1764428 1765387 D TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: dde:Dde_1529 adenosylcobinamide-phosphate synthase; cobalamin biosynthesis protein CobD 1764428..1765387 Desulfovibrio salexigens DSM 2638 8093841 YP_002991215.1 CDS Desal_1614 NC_012881.1 1765553 1767535 D KEGG: cja:CJA_1621 hypothetical protein; hypothetical protein 1765553..1767535 Desulfovibrio salexigens DSM 2638 8093842 YP_002991216.1 CDS Desal_1615 NC_012881.1 1767689 1768492 R KEGG: dde:Dde_1440 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; pyrroline-5-carboxylate reductase complement(1767689..1768492) Desulfovibrio salexigens DSM 2638 8093843 YP_002991217.1 CDS Desal_1616 NC_012881.1 1768494 1768913 R KEGG: dvm:DvMF_3160 nucleoside-diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase complement(1768494..1768913) Desulfovibrio salexigens DSM 2638 8093844 YP_002991218.1 CDS Desal_1617 NC_012881.1 1769000 1769794 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dps:DP3102 ABC transporter ATP-binding protein; ABC transporter complement(1769000..1769794) Desulfovibrio salexigens DSM 2638 8093845 YP_002991219.1 CDS Desal_1618 NC_012881.1 1769794 1770696 R PFAM: inner-membrane translocator; KEGG: dps:DP3101 hypothetical protein; inner-membrane translocator complement(1769794..1770696) Desulfovibrio salexigens DSM 2638 8093846 YP_002991220.1 CDS Desal_1619 NC_012881.1 1770891 1771841 R PFAM: protein of unknown function DUF534; KEGG: mes:Meso_2867 protein of unknown function DUF534; hypothetical protein complement(1770891..1771841) Desulfovibrio salexigens DSM 2638 8093847 YP_002991221.1 CDS Desal_1620 NC_012881.1 1772006 1773262 R PFAM: protein of unknown function DUF610 YibQ; KEGG: dvm:DvMF_3159 protein of unknown function DUF610 YibQ; hypothetical protein complement(1772006..1773262) Desulfovibrio salexigens DSM 2638 8093848 YP_002991222.1 CDS Desal_1621 NC_012881.1 1773280 1774557 R KEGG: dvu:DVU2336 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(1773280..1774557) Desulfovibrio salexigens DSM 2638 8093849 YP_002991223.1 CDS Desal_1622 NC_012881.1 1774607 1775731 R PFAM: peptidase M23; KEGG: dvl:Dvul_0922 peptidase M23B; peptidase M23 complement(1774607..1775731) Desulfovibrio salexigens DSM 2638 8093852 YP_002991224.1 CDS Desal_1623 NC_012881.1 1775741 1776394 R PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; KEGG: dvm:DvMF_3156 HhH-GPD family protein; HhH-GPD family protein complement(1775741..1776394) Desulfovibrio salexigens DSM 2638 8091367 YP_002991225.1 CDS Desal_1624 NC_012881.1 1776387 1777253 R PFAM: ribosomal L11 methyltransferase; RNA methylase; KEGG: dde:Dde_1432 50S ribosomal protein L11P methyltransferase; ribosomal L11 methyltransferase complement(1776387..1777253) Desulfovibrio salexigens DSM 2638 8091368 YP_002991226.1 CDS Desal_1625 NC_012881.1 1777498 1777719 R hypothetical protein complement(1777498..1777719) Desulfovibrio salexigens DSM 2638 8091369 YP_002991227.1 CDS Desal_1626 NC_012881.1 1777756 1778958 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(1777756..1778958) Desulfovibrio salexigens DSM 2638 8091370 YP_002991228.1 CDS Desal_1627 NC_012881.1 1778982 1779455 R TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: dde:Dde_1425 deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut complement(1778982..1779455) Desulfovibrio salexigens DSM 2638 8091371 YP_002991229.1 CDS Desal_1628 NC_012881.1 1779662 1782229 D KEGG: dvm:DvMF_3147 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; alpha-glucan phosphorylase 1779662..1782229 Desulfovibrio salexigens DSM 2638 8092093 YP_002991230.1 CDS Desal_1629 NC_012881.1 1782240 1782926 D PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: dvu:DVU1787 nuclease domain-containing protein; nuclease 1782240..1782926 Desulfovibrio salexigens DSM 2638 8092392 YP_002991231.1 CDS Desal_1630 NC_012881.1 1783047 1784573 D PFAM: ferredoxin-dependent glutamate synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_1337 glutamate synthase (NADPH); glutamate synthase 1783047..1784573 Desulfovibrio salexigens DSM 2638 8092476 YP_002991232.1 CDS Desal_1631 NC_012881.1 1784580 1785023 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU1238 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 1784580..1785023 Desulfovibrio salexigens DSM 2638 8092477 YP_002991233.1 CDS Desal_1632 NC_012881.1 1785026 1786303 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gur:Gura_2492 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1785026..1786303 Desulfovibrio salexigens DSM 2638 8092478 YP_002991234.1 CDS Desal_1633 NC_012881.1 1786375 1787478 D PFAM: glutamine amidotransferase class-II; KEGG: dde:Dde_1815 glutamate synthase (NADPH) GltB1 subunit; glutamine amidotransferase 1786375..1787478 Desulfovibrio salexigens DSM 2638 8092479 YP_002991235.1 CDS Desal_1634 NC_012881.1 1787480 1788232 D PFAM: glutamate synthase alpha subunit domain protein; KEGG: dvl:Dvul_1339 glutamate synthase alpha subunit; glutamate synthase alpha subunit domain-containing protein 1787480..1788232 Desulfovibrio salexigens DSM 2638 8092480 YP_002991236.1 CDS Desal_1635 NC_012881.1 1788278 1788628 D TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: dvl:Dvul_1340 preprotein translocase, YajC subunit; preprotein translocase subunit YajC 1788278..1788628 Desulfovibrio salexigens DSM 2638 8092481 YP_002991237.1 CDS secD NC_012881.1 1788744 1790345 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1788744..1790345 Desulfovibrio salexigens DSM 2638 8092482 YP_002991238.1 CDS Desal_1637 NC_012881.1 1790359 1791432 D TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: dde:Dde_1819 preprotein translocase subunit SecF; protein-export membrane protein SecF 1790359..1791432 Desulfovibrio salexigens DSM 2638 8092483 YP_002991239.1 CDS Desal_1638 NC_012881.1 1791611 1792426 D KEGG: bmn:BMA10247_2180 capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein 1791611..1792426 Desulfovibrio salexigens DSM 2638 8092484 YP_002991240.1 CDS Desal_1639 NC_012881.1 1792773 1793924 D PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: dde:Dde_3298 tyrosine-specific transport protein; aromatic amino acid permease 1792773..1793924 Desulfovibrio salexigens DSM 2638 8092485 YP_002991241.1 CDS Desal_1640 NC_012881.1 1793962 1795200 R KEGG: vvy:VV1587 permease; hypothetical protein complement(1793962..1795200) Desulfovibrio salexigens DSM 2638 8092486 YP_002991242.1 CDS Desal_1641 NC_012881.1 1795604 1797331 D KEGG: dde:Dde_2460 aldehyde:ferredoxin oxidoreductase, tungsten-containing; PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 1795604..1797331 Desulfovibrio salexigens DSM 2638 8092487 YP_002991243.1 CDS Desal_1642 NC_012881.1 1797391 1797852 R PFAM: UspA domain protein; KEGG: sfu:Sfum_0818 UspA domain protein; UspA domain-containing protein complement(1797391..1797852) Desulfovibrio salexigens DSM 2638 8092488 YP_002991244.1 CDS Desal_1643 NC_012881.1 1797981 1798952 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvm:DvMF_0945 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(1797981..1798952) Desulfovibrio salexigens DSM 2638 8092489 YP_002991245.1 CDS Desal_1644 NC_012881.1 1798972 1799856 R KEGG: dvu:DVU1363 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase complement(1798972..1799856) Desulfovibrio salexigens DSM 2638 8092490 YP_002991246.1 CDS Desal_1645 NC_012881.1 1799853 1800875 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: dvm:DvMF_0141 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(1799853..1800875) Desulfovibrio salexigens DSM 2638 8092491 YP_002991247.1 CDS Desal_1646 NC_012881.1 1800976 1801461 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dde:Dde_1528 RNA methyltransferase; tRNA/rRNA methyltransferase SpoU complement(1800976..1801461) Desulfovibrio salexigens DSM 2638 8092492 YP_002991248.1 CDS Desal_1647 NC_012881.1 1802078 1803265 D PFAM: integrase family protein; KEGG: dol:Dole_2954 integrase family protein; integrase family protein 1802078..1803265 Desulfovibrio salexigens DSM 2638 8092493 YP_002991249.1 CDS Desal_1648 NC_012881.1 1803262 1803492 R KEGG: sfu:Sfum_2425 hypothetical protein; hypothetical protein complement(1803262..1803492) Desulfovibrio salexigens DSM 2638 8092494 YP_002991250.1 CDS Desal_1649 NC_012881.1 1803509 1803949 R KEGG: dvu:DVU2832 transcriptional regulator CII; transcriptional regulator CII complement(1803509..1803949) Desulfovibrio salexigens DSM 2638 8092495 YP_002991251.1 CDS Desal_1650 NC_012881.1 1804031 1804306 R hypothetical protein complement(1804031..1804306) Desulfovibrio salexigens DSM 2638 8092496 YP_002991252.1 CDS Desal_1651 NC_012881.1 1804417 1804824 D KEGG: bhe:BH11420 hypothetical protein; hypothetical protein 1804417..1804824 Desulfovibrio salexigens DSM 2638 8092497 YP_002991253.1 CDS Desal_1652 NC_012881.1 1804948 1805754 D PFAM: NERD domain protein; NERD domain-containing protein 1804948..1805754 Desulfovibrio salexigens DSM 2638 8092498 YP_002991254.1 CDS Desal_1653 NC_012881.1 1805759 1805983 D hypothetical protein 1805759..1805983 Desulfovibrio salexigens DSM 2638 8092499 YP_002991255.1 CDS Desal_1654 NC_012881.1 1805995 1807314 D SMART: ATPase AAA; KEGG: pha:PSHAb0321 enzyme with ATPase activity; ATPase AAA 1805995..1807314 Desulfovibrio salexigens DSM 2638 8092500 YP_002991256.1 CDS Desal_1655 NC_012881.1 1807318 1808178 D hypothetical protein 1807318..1808178 Desulfovibrio salexigens DSM 2638 8092501 YP_002991257.1 CDS Desal_1656 NC_012881.1 1808198 1809607 D KEGG: tau:Tola_3040 methyltransferase type 12; hypothetical protein 1808198..1809607 Desulfovibrio salexigens DSM 2638 8092502 YP_002991258.1 CDS Desal_1657 NC_012881.1 1809589 1810170 D PFAM: methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; methyltransferase type 12; KEGG: esa:ESA_03456 hypothetical protein; methyltransferase type 11 1809589..1810170 Desulfovibrio salexigens DSM 2638 8092503 YP_002991259.1 CDS Desal_1658 NC_012881.1 1810217 1814053 D KEGG: rpc:RPC_3926 superfamily I DNA/RNA helicase; superfamily I DNA and RNA helicase and helicase subunit-like protein 1810217..1814053 Desulfovibrio salexigens DSM 2638 8092504 YP_002991260.1 CDS Desal_1659 NC_012881.1 1814064 1815926 D hypothetical protein 1814064..1815926 Desulfovibrio salexigens DSM 2638 8092505 YP_002991261.1 CDS Desal_1660 NC_012881.1 1816029 1816616 D KEGG: rlt:Rleg2_2430 hypothetical protein; hypothetical protein 1816029..1816616 Desulfovibrio salexigens DSM 2638 8092506 YP_002991262.1 CDS Desal_1661 NC_012881.1 1816664 1817356 R PFAM: protein of unknown function DUF45; KEGG: vha:VIBHAR_05618 hypothetical protein; hypothetical protein complement(1816664..1817356) Desulfovibrio salexigens DSM 2638 8092507 YP_002991263.1 CDS Desal_1662 NC_012881.1 1817360 1820590 R KEGG: gur:Gura_4037 HsdR family type I site-specific deoxyribonuclease; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; HsdR family type I site-specific deoxyribonuclease complement(1817360..1820590) Desulfovibrio salexigens DSM 2638 8092508 YP_002991264.1 CDS Desal_1663 NC_012881.1 1820593 1820976 R KEGG: sbm:Shew185_3245 hypothetical protein; hypothetical protein complement(1820593..1820976) Desulfovibrio salexigens DSM 2638 8092509 YP_002991265.1 CDS Desal_1664 NC_012881.1 1820981 1821853 R KEGG: geo:Geob_2863 hypothetical protein; hypothetical protein complement(1820981..1821853) Desulfovibrio salexigens DSM 2638 8092510 YP_002991266.1 CDS Desal_1665 NC_012881.1 1821854 1822798 R hypothetical protein complement(1821854..1822798) Desulfovibrio salexigens DSM 2638 8092511 YP_002991267.1 CDS Desal_1666 NC_012881.1 1822804 1824006 R PFAM: restriction modification system DNA specificity domain; KEGG: pmy:Pmen_0564 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein complement(1822804..1824006) Desulfovibrio salexigens DSM 2638 8092512 YP_002991268.1 CDS Desal_1667 NC_012881.1 1823999 1826569 R PFAM: N-6 DNA methylase; KEGG: gur:Gura_4043 N-6 DNA methylase; N-6 DNA methylase complement(1823999..1826569) Desulfovibrio salexigens DSM 2638 8092513 YP_002991269.1 CDS Desal_1668 NC_012881.1 1827055 1827882 D TIGRFAM: phage regulatory protein, Rha family; KEGG: set:SEN1953 phage immunity protein; phage regulatory protein, Rha family 1827055..1827882 Desulfovibrio salexigens DSM 2638 8092514 YP_002991270.1 CDS Desal_1669 NC_012881.1 1827839 1828174 D KEGG: bcs:BCAN_B0374 TraJ protein; TraJ protein 1827839..1828174 Desulfovibrio salexigens DSM 2638 8092515 YP_002991271.1 CDS Desal_1670 NC_012881.1 1828171 1829787 D PFAM: relaxase/mobilization nuclease family protein; KEGG: dps:DPPB43 related to TraI protein (partial length); relaxase/mobilization nuclease family protein 1828171..1829787 Desulfovibrio salexigens DSM 2638 8092516 YP_002991272.1 CDS Desal_1671 NC_012881.1 1829973 1832615 D PFAM: TPR repeat-containing protein; KEGG: hypothetical protein; hypothetical protein 1829973..1832615 Desulfovibrio salexigens DSM 2638 8092517 YP_002991273.1 CDS Desal_1672 NC_012881.1 1832520 1833635 R hypothetical protein complement(1832520..1833635) Desulfovibrio salexigens DSM 2638 8092518 YP_002991274.1 CDS Desal_1673 NC_012881.1 1833662 1834585 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rpb:RPB_4524 phage integrase; integrase family protein complement(1833662..1834585) Desulfovibrio salexigens DSM 2638 8092519 YP_002991275.1 CDS Desal_1674 NC_012881.1 1834946 1838062 D links inner and outer membrane; KEGG: azc:AZC_1396 hypothetical protein; periplasmic protein TonB-like protein 1834946..1838062 Desulfovibrio salexigens DSM 2638 8092520 YP_002991276.1 CDS Desal_1675 NC_012881.1 1838130 1839653 D PFAM: outer membrane efflux protein; KEGG: pin:Ping_3184 outer membrane efflux protein; outer membrane efflux protein 1838130..1839653 Desulfovibrio salexigens DSM 2638 8092521 YP_002991277.1 CDS Desal_1676 NC_012881.1 1839724 1840542 D KEGG: rme:Rmet_5409 hypothetical protein; hypothetical protein 1839724..1840542 Desulfovibrio salexigens DSM 2638 8092522 YP_002991278.1 CDS Desal_1677 NC_012881.1 1840539 1841894 D KEGG: abu:Abu_1031 hypothetical protein; hypothetical protein 1840539..1841894 Desulfovibrio salexigens DSM 2638 8092523 YP_002991279.1 CDS Desal_1678 NC_012881.1 1841907 1842173 D hypothetical protein 1841907..1842173 Desulfovibrio salexigens DSM 2638 8092524 YP_002991280.1 CDS Desal_1679 NC_012881.1 1842178 1844289 D PFAM: peptidase M50; KEGG: eca:ECA0803 hypothetical protein; peptidase M50 1842178..1844289 Desulfovibrio salexigens DSM 2638 8092525 YP_002991281.1 CDS Desal_1680 NC_012881.1 1844341 1844460 R hypothetical protein complement(1844341..1844460) Desulfovibrio salexigens DSM 2638 8092526 YP_002991282.1 CDS Desal_1681 NC_012881.1 1844513 1845205 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: avn:Avin_36570 hypothetical protein; XRE family transcriptional regulator complement(1844513..1845205) Desulfovibrio salexigens DSM 2638 8092527 YP_002991283.1 CDS Desal_1682 NC_012881.1 1845260 1847563 R PFAM: domain of unknown function DUF1738; TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: dps:DPPB22 related to DNA primase TraC; hypothetical protein complement(1845260..1847563) Desulfovibrio salexigens DSM 2638 8092528 YP_002991284.1 CDS Desal_1683 NC_012881.1 1847568 1847780 R hypothetical protein complement(1847568..1847780) Desulfovibrio salexigens DSM 2638 8092529 YP_002991285.1 CDS Desal_1684 NC_012881.1 1847803 1849965 R PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; KEGG: cjj:CJJ81176_pTet0045 DNA topoisomerase III; DNA topoisomerase type IA central domain-containing protein complement(1847803..1849965) Desulfovibrio salexigens DSM 2638 8092530 YP_002991286.1 CDS Desal_1685 NC_012881.1 1849969 1850484 R TIGRFAM: conjugative transfer signal peptidase TraF; KEGG: eba:p2B18 conjugal transfer peptidase TraF; conjugative transfer signal peptidase TraF complement(1849969..1850484) Desulfovibrio salexigens DSM 2638 8092531 YP_002991287.1 CDS Desal_1686 NC_012881.1 1850481 1852103 R KEGG: dvl:Dvul_2955 hypothetical protein; hypothetical protein complement(1850481..1852103) Desulfovibrio salexigens DSM 2638 8092532 YP_002991288.1 CDS Desal_1687 NC_012881.1 1852063 1852500 R hypothetical protein complement(1852063..1852500) Desulfovibrio salexigens DSM 2638 8092533 YP_002991289.1 CDS Desal_1688 NC_012881.1 1852481 1854427 R PFAM: TRAG family protein; KEGG: ajs:Ajs_4317 conjugal transfer coupling protein TraG; TRAG family protein complement(1852481..1854427) Desulfovibrio salexigens DSM 2638 8092534 YP_002991290.1 CDS Desal_1689 NC_012881.1 1854430 1855641 R PFAM: conjugation TrbI family protein; KEGG: dps:DPPB20 conjugal transfer protein TrbI; conjugation TrbI family protein complement(1854430..1855641) Desulfovibrio salexigens DSM 2638 8092535 YP_002991291.1 CDS Desal_1690 NC_012881.1 1855651 1856277 R PFAM: hypothetical protien; KEGG: stt:t1351 bacteriophage tail fiber protein; hypothetical protein complement(1855651..1856277) Desulfovibrio salexigens DSM 2638 8092536 YP_002991292.1 CDS Desal_1691 NC_012881.1 1856289 1857416 R KEGG: pfl:PFL_4682 type IV prepilin PilV; hypothetical protein complement(1856289..1857416) Desulfovibrio salexigens DSM 2638 8092537 YP_002991293.1 CDS Desal_1692 NC_012881.1 1857425 1857862 R KEGG: psb:Psyr_1509 PilM protein; PilM protein complement(1857425..1857862) Desulfovibrio salexigens DSM 2638 8092538 YP_002991294.1 CDS Desal_1693 NC_012881.1 1857859 1858839 R KEGG: pol:Bpro_5246 type II secretion system protein E; type II secretion system protein E complement(1857859..1858839) Desulfovibrio salexigens DSM 2638 8092539 YP_002991295.1 CDS Desal_1694 NC_012881.1 1858852 1859349 R hypothetical protein complement(1858852..1859349) Desulfovibrio salexigens DSM 2638 8092540 YP_002991296.1 CDS Desal_1695 NC_012881.1 1859372 1859851 R PFAM: PilS domain protein; KEGG: ecg:E2348C_2109 predicted type IV pilin-like protein; PilS domain-containing protein complement(1859372..1859851) Desulfovibrio salexigens DSM 2638 8092541 YP_002991297.1 CDS Desal_1696 NC_012881.1 1859862 1860932 R PFAM: type II secretion system protein; KEGG: bpd:BURPS668_A2253 type IV pilus biogenesis protein; type II secretion system protein complement(1859862..1860932) Desulfovibrio salexigens DSM 2638 8092542 YP_002991298.1 CDS Desal_1697 NC_012881.1 1860919 1862529 R PFAM: type II secretion system protein E; KEGG: bcm:Bcenmc03_5912 type II secretion system protein E; type II secretion system protein E complement(1860919..1862529) Desulfovibrio salexigens DSM 2638 8092543 YP_002991299.1 CDS Desal_1698 NC_012881.1 1862533 1863246 R TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: similar to ENSANGP00000031759; type IV pilus biogenesis protein PilP complement(1862533..1863246) Desulfovibrio salexigens DSM 2638 8092544 YP_002991300.1 CDS Desal_1699 NC_012881.1 1863233 1864486 R KEGG: rpi:Rpic_5029 hypothetical protein; hypothetical protein complement(1863233..1864486) Desulfovibrio salexigens DSM 2638 8092545 YP_002991301.1 CDS Desal_1700 NC_012881.1 1864489 1865982 R KEGG: pol:Bpro_5240 type II and III secretion system protein; type II secretory pathway component PulD-like protein complement(1864489..1865982) Desulfovibrio salexigens DSM 2638 8092546 YP_002991302.1 CDS Desal_1701 NC_012881.1 1865985 1866713 R KEGG: plu:plu1737 hypothetical protein; hypothetical protein complement(1865985..1866713) Desulfovibrio salexigens DSM 2638 8092547 YP_002991303.1 CDS Desal_1702 NC_012881.1 1866710 1867714 R TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: conjugal transfer protein TrbG/VirB9/CagX; KEGG: dps:DPPB18 conjugal transfer protein TrbG; P-type conjugative transfer protein TrbG complement(1866710..1867714) Desulfovibrio salexigens DSM 2638 8092548 YP_002991304.1 CDS Desal_1703 NC_012881.1 1867723 1868382 R PFAM: conjugal transfer protein; KEGG: dps:DPPB17 conjugal transfer protein TrbF; conjugal transfer protein complement(1867723..1868382) Desulfovibrio salexigens DSM 2638 8092549 YP_002991305.1 CDS Desal_1704 NC_012881.1 1868402 1869835 R TIGRFAM: P-type conjugative transfer protein TrbL; KEGG: kpe:KPK_1289 P-type conjugative transfer protein TrbL; P-type conjugative transfer protein TrbL complement(1868402..1869835) Desulfovibrio salexigens DSM 2638 8092550 YP_002991306.1 CDS Desal_1705 NC_012881.1 1869837 1870667 R TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: dps:DPPB15 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ complement(1869837..1870667) Desulfovibrio salexigens DSM 2638 8092551 YP_002991307.1 CDS Desal_1706 NC_012881.1 1870634 1873084 R PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: dps:DPPB14 conjugal transfer protein TrbE; CagE TrbE VirB component of type IV transporter system complement(1870634..1873084) Desulfovibrio salexigens DSM 2638 8092552 YP_002991308.1 CDS Desal_1707 NC_012881.1 1873094 1873393 R PFAM: conjugal transfer TrbD family protein; KEGG: avi:Avi_9658 conjugal transfer protein; conjugal transfer TrbD family protein complement(1873094..1873393) Desulfovibrio salexigens DSM 2638 8092553 YP_002991309.1 CDS Desal_1708 NC_012881.1 1873390 1873701 R PFAM: conjugal transfer protein TrbC; KEGG: dps:DPPB13 conjugal transfer protein TrbC; conjugal transfer protein TrbC complement(1873390..1873701) Desulfovibrio salexigens DSM 2638 8092554 YP_002991310.1 CDS Desal_1709 NC_012881.1 1873685 1874656 R TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: dps:DPPB12 conjugal transfer protein TrbB; P-type conjugative transfer ATPase TrbB complement(1873685..1874656) Desulfovibrio salexigens DSM 2638 8092923 YP_002991311.1 CDS Desal_1710 NC_012881.1 1874656 1875069 R KEGG: net:Neut_2576 hypothetical protein; hypothetical protein complement(1874656..1875069) Desulfovibrio salexigens DSM 2638 8092008 YP_002991312.1 CDS Desal_1711 NC_012881.1 1875079 1875798 R KEGG: ajs:Ajs_4311 conjugal transfer protein TraL; conjugal transfer protein TraL complement(1875079..1875798) Desulfovibrio salexigens DSM 2638 8092009 YP_002991313.1 CDS Desal_1712 NC_012881.1 1875816 1876532 R hypothetical protein complement(1875816..1876532) Desulfovibrio salexigens DSM 2638 8092094 YP_002991314.1 CDS Desal_1713 NC_012881.1 1876514 1876894 R TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: hhe:HH1693 hypothetical protein; endoribonuclease L-PSP complement(1876514..1876894) Desulfovibrio salexigens DSM 2638 8092095 YP_002991315.1 CDS Desal_1714 NC_012881.1 1876912 1877895 R PFAM: nucleoside recognition domain protein; KEGG: dde:Dde_2184 hypothetical protein; nucleoside recognition domain-containing protein complement(1876912..1877895) Desulfovibrio salexigens DSM 2638 8092659 YP_002991316.1 CDS Desal_1715 NC_012881.1 1877973 1878326 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pca:Pcar_1874 anti-anti-sigma regulatory factor; anti-sigma-factor antagonist complement(1877973..1878326) Desulfovibrio salexigens DSM 2638 8092660 YP_002991317.1 CDS Desal_1716 NC_012881.1 1878410 1879528 R PFAM: histidine kinase dimerisation/phosphoacceptor; response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: ppd:Ppro_3009 hypothetical protein; signal transduction histidine kinase complement(1878410..1879528) Desulfovibrio salexigens DSM 2638 8092661 YP_002991318.1 CDS Desal_1717 NC_012881.1 1879732 1880418 D PFAM: type IV pilus assembly PilZ; KEGG: gbm:Gbem_0720 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1879732..1880418 Desulfovibrio salexigens DSM 2638 8092662 YP_002991319.1 CDS Desal_1718 NC_012881.1 1880420 1880623 D hypothetical protein 1880420..1880623 Desulfovibrio salexigens DSM 2638 8092663 YP_002991320.1 CDS Desal_1719 NC_012881.1 1880699 1881430 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvm:DvMF_1342 ABC transporter; ABC transporter complement(1880699..1881430) Desulfovibrio salexigens DSM 2638 8092664 YP_002991321.1 CDS Desal_1720 NC_012881.1 1881430 1882443 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2021 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease complement(1881430..1882443) Desulfovibrio salexigens DSM 2638 8092665 YP_002991322.1 CDS Desal_1721 NC_012881.1 1882599 1883414 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: dvl:Dvul_2022 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(1882599..1883414) Desulfovibrio salexigens DSM 2638 8092666 YP_002991323.1 CDS Desal_1722 NC_012881.1 1883474 1883641 R KEGG: dde:Dde_1384 hypothetical protein; hypothetical protein complement(1883474..1883641) Desulfovibrio salexigens DSM 2638 8092667 YP_002991324.1 CDS Desal_1723 NC_012881.1 1883841 1884584 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: dde:Dde_2306 extracellular solute-binding protein; family 3 extracellular solute-binding protein 1883841..1884584 Desulfovibrio salexigens DSM 2638 8092668 YP_002991325.1 CDS Desal_1724 NC_012881.1 1884673 1885455 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_1825 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease 1884673..1885455 Desulfovibrio salexigens DSM 2638 8092669 YP_002991326.1 CDS Desal_1725 NC_012881.1 1885445 1886182 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_2308 ATPase; ABC transporter 1885445..1886182 Desulfovibrio salexigens DSM 2638 8092670 YP_002991327.1 CDS Desal_1726 NC_012881.1 1886339 1888294 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: dvl:Dvul_2282 histidine kinase; Hpt sensor hybrid histidine kinase 1886339..1888294 Desulfovibrio salexigens DSM 2638 8092671 YP_002991328.1 CDS Desal_1727 NC_012881.1 1888372 1889469 D PFAM: protein of unknown function UPF0118; KEGG: dde:Dde_2448 hypothetical protein; hypothetical protein 1888372..1889469 Desulfovibrio salexigens DSM 2638 8092672 YP_002991329.1 CDS Desal_1728 NC_012881.1 1889526 1891154 R PFAM: 5'-nucleotidase domain protein; KEGG: sun:SUN_0890 5'-nucleotidase; 5'-nucleotidase domain protein complement(1889526..1891154) Desulfovibrio salexigens DSM 2638 8092673 YP_002991330.1 CDS Desal_1729 NC_012881.1 1891300 1892535 D PFAM: MltA domain protein; 3D domain protein; KEGG: dde:Dde_2733 transglycosylase; MltA domain-containing protein 1891300..1892535 Desulfovibrio salexigens DSM 2638 8092674 YP_002991331.1 CDS Desal_1730 NC_012881.1 1892540 1893268 D hypothetical protein 1892540..1893268 Desulfovibrio salexigens DSM 2638 8092675 YP_002991332.1 CDS Desal_1731 NC_012881.1 1893344 1893553 R TIGRFAM: regulatory protein, FmdB family; KEGG: dvl:Dvul_1274 FmdB family regulatory protein; FmdB family regulatory protein complement(1893344..1893553) Desulfovibrio salexigens DSM 2638 8092676 YP_002991333.1 CDS Desal_1732 NC_012881.1 1893662 1894654 R KEGG: viral A-type inclusion protein; hypothetical protein complement(1893662..1894654) Desulfovibrio salexigens DSM 2638 8092677 YP_002991334.1 CDS Desal_1733 NC_012881.1 1894980 1895435 D hypothetical protein 1894980..1895435 Desulfovibrio salexigens DSM 2638 8092678 YP_002991335.1 CDS Desal_1734 NC_012881.1 1895670 1896722 D PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: tcx:Tcr_2062 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 1895670..1896722 Desulfovibrio salexigens DSM 2638 8092679 YP_002991336.1 CDS Desal_1735 NC_012881.1 1896825 1898933 R PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dal:Dalk_0215 dihydropyrimidine dehydrogenase (NADP(+)); Fe-S cluster domain-containing protein complement(1896825..1898933) Desulfovibrio salexigens DSM 2638 8092680 YP_002991337.1 CDS Desal_1736 NC_012881.1 1898936 1899511 R TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: dde:Dde_0585 electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A complement(1898936..1899511) Desulfovibrio salexigens DSM 2638 8092681 YP_002991338.1 CDS Desal_1737 NC_012881.1 1899524 1900189 R in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE complement(1899524..1900189) Desulfovibrio salexigens DSM 2638 8092682 YP_002991339.1 CDS Desal_1738 NC_012881.1 1900191 1900778 R TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: dds:Ddes_1240 FMN-binding domain protein; RnfABCDGE type electron transport complex subunit G complement(1900191..1900778) Desulfovibrio salexigens DSM 2638 8092683 YP_002991340.1 CDS Desal_1739 NC_012881.1 1900775 1901755 R TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: dde:Dde_0582 electron transport complex, RnfABCDGE type, D subunit; RnfABCDGE type electron transport complex subunit D complement(1900775..1901755) Desulfovibrio salexigens DSM 2638 8092684 YP_002991341.1 CDS Desal_1740 NC_012881.1 1901752 1902912 R KEGG: dde:Dde_0581 electron transport complex protein RnfC; electron transport complex protein RnfC complement(1901752..1902912) Desulfovibrio salexigens DSM 2638 8092685 YP_002991342.1 CDS Desal_1741 NC_012881.1 1902926 1903672 R KEGG: dde:Dde_0580 cytochrome c family protein; cytochrome c family protein complement(1902926..1903672) Desulfovibrio salexigens DSM 2638 8092686 YP_002991343.1 CDS Desal_1742 NC_012881.1 1904007 1905521 D PFAM: alkaline phosphatase; SMART: alkaline phosphatase; KEGG: dde:Dde_1216 alkaline phosphatase; alkaline phosphatase 1904007..1905521 Desulfovibrio salexigens DSM 2638 8092687 YP_002991344.1 CDS Desal_1743 NC_012881.1 1905610 1906737 D PFAM: YibE/F family protein; KEGG: dde:Dde_1217 multitransmembrane protein-like; hypothetical protein 1905610..1906737 Desulfovibrio salexigens DSM 2638 8092688 YP_002991345.1 CDS Desal_1744 NC_012881.1 1906818 1907495 D PFAM: acid phosphatase (class B); KEGG: cbc:CbuK_0531 acid phosphatase; acid phosphatase (class B) 1906818..1907495 Desulfovibrio salexigens DSM 2638 8092689 YP_002991346.1 CDS Desal_1745 NC_012881.1 1907579 1908490 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: sfu:Sfum_0698 thioredoxin-disulfide reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1907579..1908490) Desulfovibrio salexigens DSM 2638 8092690 YP_002991347.1 CDS Desal_1746 NC_012881.1 1908601 1909362 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dvl:Dvul_1712 metal dependent phosphohydrolase; metal-dependent phosphohydrolase HD sub domain-containing protein complement(1908601..1909362) Desulfovibrio salexigens DSM 2638 8092691 YP_002991348.1 CDS Desal_1747 NC_012881.1 1909367 1909693 R KEGG: dvl:Dvul_1713 hypothetical protein; hypothetical protein complement(1909367..1909693) Desulfovibrio salexigens DSM 2638 8092692 YP_002991349.1 CDS Desal_1748 NC_012881.1 1909852 1910262 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dde:Dde_0774 response regulator receiver domain-containing protein; response regulator receiver protein 1909852..1910262 Desulfovibrio salexigens DSM 2638 8092693 YP_002991350.1 CDS Desal_1749 NC_012881.1 1910361 1911299 D PFAM: import inner membrane translocase subunit Tim44; KEGG: dde:Dde_0773 hypothetical protein; import inner membrane translocase subunit Tim44 1910361..1911299 Desulfovibrio salexigens DSM 2638 8092694 YP_002991351.1 CDS Desal_1750 NC_012881.1 1911457 1911759 D PFAM: Hpt domain protein; KEGG: sat:SYN_00227 cytoplasmic protein; Hpt protein 1911457..1911759 Desulfovibrio salexigens DSM 2638 8092695 YP_002991352.1 CDS Desal_1751 NC_012881.1 1911769 1912911 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvl:Dvul_2450 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(1911769..1912911) Desulfovibrio salexigens DSM 2638 8092696 YP_002991353.1 CDS Desal_1752 NC_012881.1 1913327 1914259 D KEGG: dde:Dde_2536 hypothetical protein; hypothetical protein 1913327..1914259 Desulfovibrio salexigens DSM 2638 8092697 YP_002991354.1 CDS Desal_1753 NC_012881.1 1914358 1914786 D KEGG: dvm:DvMF_3171 hypothetical protein; hypothetical protein 1914358..1914786 Desulfovibrio salexigens DSM 2638 8092698 YP_002991355.1 CDS Desal_1754 NC_012881.1 1914818 1915228 R KEGG: dal:Dalk_1050 hypothetical protein; hypothetical protein complement(1914818..1915228) Desulfovibrio salexigens DSM 2638 8092699 YP_002991356.1 CDS Desal_1755 NC_012881.1 1915212 1916108 R KEGG: dal:Dalk_1051 hypothetical protein; hypothetical protein complement(1915212..1916108) Desulfovibrio salexigens DSM 2638 8092700 YP_002991357.1 CDS Desal_1756 NC_012881.1 1916283 1918244 R KEGG: dde:Dde_0728 hypothetical protein; hypothetical protein complement(1916283..1918244) Desulfovibrio salexigens DSM 2638 8092701 YP_002991358.1 CDS Desal_1757 NC_012881.1 1918276 1920249 R KEGG: dal:Dalk_0586 hypothetical protein; hypothetical protein complement(1918276..1920249) Desulfovibrio salexigens DSM 2638 8092702 YP_002991359.1 CDS Desal_1758 NC_012881.1 1920267 1925135 R PFAM: protein of unknown function DUF214; KEGG: dal:Dalk_0585 protein of unknown function DUF214; hypothetical protein complement(1920267..1925135) Desulfovibrio salexigens DSM 2638 8092703 YP_002991360.1 CDS Desal_1759 NC_012881.1 1925155 1925889 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_0731 ATPase; ABC transporter complement(1925155..1925889) Desulfovibrio salexigens DSM 2638 8092704 YP_002991361.1 CDS Desal_1760 NC_012881.1 1925951 1926628 R PFAM: protein of unknown function DUF214; KEGG: dal:Dalk_0583 protein of unknown function DUF214; hypothetical protein complement(1925951..1926628) Desulfovibrio salexigens DSM 2638 8092705 YP_002991362.1 CDS Desal_1761 NC_012881.1 1926858 1927643 R PFAM: polysaccharide deacetylase; KEGG: dal:Dalk_0582 polysaccharide deacetylase; polysaccharide deacetylase complement(1926858..1927643) Desulfovibrio salexigens DSM 2638 8092706 YP_002991363.1 CDS Desal_1762 NC_012881.1 1927643 1928800 R KEGG: dal:Dalk_0581 glycosyltransferase 28 domain protein; glycosyltransferase 28 domain protein complement(1927643..1928800) Desulfovibrio salexigens DSM 2638 8092707 YP_002991364.1 CDS Desal_1763 NC_012881.1 1928797 1929414 R PFAM: phosphoglycerate mutase; KEGG: dde:Dde_0736 phosphoglycerate mutase (GpmB protein)-like; phosphoglycerate mutase complement(1928797..1929414) Desulfovibrio salexigens DSM 2638 8092708 YP_002991365.1 CDS Desal_1764 NC_012881.1 1929414 1930532 R PFAM: glycosyl transferase group 1; KEGG: dal:Dalk_0579 glycosyl transferase group 1; group 1 glycosyl transferase complement(1929414..1930532) Desulfovibrio salexigens DSM 2638 8092709 YP_002991366.1 CDS Desal_1765 NC_012881.1 1930761 1932023 R PFAM: glycosyl transferase group 1; KEGG: dal:Dalk_0578 glycosyl transferase group 1; group 1 glycosyl transferase complement(1930761..1932023) Desulfovibrio salexigens DSM 2638 8092710 YP_002991367.1 CDS Desal_1766 NC_012881.1 1932023 1933189 R KEGG: dal:Dalk_0577 glycosyltransferase 28 domain protein; glycosyltransferase 28 domain protein complement(1932023..1933189) Desulfovibrio salexigens DSM 2638 8092711 YP_002991368.1 CDS Desal_1767 NC_012881.1 1933439 1934608 D KEGG: dps:DP0619 hypothetical protein; hypothetical protein 1933439..1934608 Desulfovibrio salexigens DSM 2638 8092712 YP_002991369.1 CDS Desal_1768 NC_012881.1 1934595 1935308 D PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: rme:Rmet_5243 methyltransferase type 11; methyltransferase type 12 1934595..1935308 Desulfovibrio salexigens DSM 2638 8092713 YP_002991370.1 CDS Desal_1769 NC_012881.1 1935627 1937291 D KEGG: eca:ECA3848 acetolactate synthase catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; acetolactate synthase large subunit 1935627..1937291 Desulfovibrio salexigens DSM 2638 8092714 YP_002991371.1 CDS Desal_1770 NC_012881.1 1937294 1937566 D TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: spe:Spro_0733 acetolactate synthase 1 regulatory subunit; acetolactate synthase small subunit 1937294..1937566 Desulfovibrio salexigens DSM 2638 8092715 YP_002991372.1 CDS Desal_1771 NC_012881.1 1937597 1938430 R KEGG: cja:CJA_3023 hypothetical protein; hypothetical protein complement(1937597..1938430) Desulfovibrio salexigens DSM 2638 8092716 YP_002991373.1 CDS Desal_1772 NC_012881.1 1938727 1940157 R KEGG: sfu:Sfum_2651 hypothetical protein; hypothetical protein complement(1938727..1940157) Desulfovibrio salexigens DSM 2638 8092717 YP_002991374.1 CDS Desal_1773 NC_012881.1 1940227 1942143 R PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvu:DVU2413 radical SAM domain-containing protein; radical SAM domain protein complement(1940227..1942143) Desulfovibrio salexigens DSM 2638 8092718 YP_002991375.1 CDS Desal_1774 NC_012881.1 1942307 1943668 D TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: dde:Dde_2688 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 1942307..1943668 Desulfovibrio salexigens DSM 2638 8092719 YP_002991376.1 CDS Desal_1775 NC_012881.1 1943989 1944636 R hypothetical protein complement(1943989..1944636) Desulfovibrio salexigens DSM 2638 8092721 YP_002991377.1 CDS Desal_1776 NC_012881.1 1944932 1945099 D hypothetical protein 1944932..1945099 Desulfovibrio salexigens DSM 2638 8092722 YP_002991378.1 CDS Desal_1777 NC_012881.1 1945158 1945538 R hypothetical protein complement(1945158..1945538) Desulfovibrio salexigens DSM 2638 8092723 YP_002991379.1 CDS Desal_1778 NC_012881.1 1945872 1947344 D TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pap:PSPA7_4736 sodium/proline symporter PutP; sodium/proline symporter 1945872..1947344 Desulfovibrio salexigens DSM 2638 8092724 YP_002991380.1 CDS Desal_1779 NC_012881.1 1947490 1948656 D PFAM: RNA methylase; KEGG: dde:Dde_1488 hypothetical protein; RNA methylase 1947490..1948656 Desulfovibrio salexigens DSM 2638 8092725 YP_002991381.1 CDS Desal_1780 NC_012881.1 1948791 1949159 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sat:SYN_00173 response regulator receiver domain-containing protein; response regulator receiver protein 1948791..1949159 Desulfovibrio salexigens DSM 2638 8092726 YP_002991382.1 CDS Desal_1781 NC_012881.1 1949281 1951146 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: dvu:DVU1975 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(1949281..1951146) Desulfovibrio salexigens DSM 2638 8092727 YP_002991383.1 CDS Desal_1782 NC_012881.1 1951529 1952509 D PFAM: PhoH family protein; KEGG: dvm:DvMF_0575 PhoH family protein; PhoH family protein 1951529..1952509 Desulfovibrio salexigens DSM 2638 8092728 YP_002991384.1 CDS Desal_1783 NC_012881.1 1952509 1952964 D PFAM: protein of unknown function UPF0054; KEGG: dvl:Dvul_1281 hypothetical protein; hypothetical protein 1952509..1952964 Desulfovibrio salexigens DSM 2638 8092729 YP_002991385.1 CDS Desal_1784 NC_012881.1 1953171 1954148 D TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: dvm:DvMF_0046 ornithine carbamoyltransferase; ornithine carbamoyltransferase 1953171..1954148 Desulfovibrio salexigens DSM 2638 8092730 YP_002991386.1 CDS Desal_1785 NC_012881.1 1954178 1955413 D KEGG: dde:Dde_2531 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; argininosuccinate synthase 1954178..1955413 Desulfovibrio salexigens DSM 2638 8092731 YP_002991387.1 CDS Desal_1786 NC_012881.1 1955689 1957071 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1955689..1957071 Desulfovibrio salexigens DSM 2638 8092732 YP_002991388.1 CDS Desal_1787 NC_012881.1 1957160 1957561 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dar:Daro_1617 hypothetical protein; hemerythrin-like metal-binding protein complement(1957160..1957561) Desulfovibrio salexigens DSM 2638 8092733 YP_002991389.1 CDS Desal_1788 NC_012881.1 1957784 1961692 R PFAM: acriflavin resistance protein; KEGG: gsu:GSU1332 CzcA family heavy metal efflux protein; acriflavin resistance protein complement(1957784..1961692) Desulfovibrio salexigens DSM 2638 8092734 YP_002991390.1 CDS Desal_1789 NC_012881.1 1961708 1963903 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_0088 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit complement(1961708..1963903) Desulfovibrio salexigens DSM 2638 8092735 YP_002991391.1 CDS Desal_1790 NC_012881.1 1963918 1965291 R PFAM: outer membrane efflux protein; KEGG: pca:Pcar_1716 outer membrane protein; outer membrane efflux protein complement(1963918..1965291) Desulfovibrio salexigens DSM 2638 8092736 YP_002991392.1 CDS Desal_1791 NC_012881.1 1965789 1967912 D PFAM: Stage II sporulation E family protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein; KEGG: dal:Dalk_1872 protein serine/threonine phosphatase; protein serine/threonine phosphatase 1965789..1967912 Desulfovibrio salexigens DSM 2638 8092737 YP_002991393.1 CDS Desal_1792 NC_012881.1 1967923 1968384 D KEGG: hypothetical protein; hypothetical protein 1967923..1968384 Desulfovibrio salexigens DSM 2638 8092738 YP_002991394.1 CDS Desal_1793 NC_012881.1 1968910 1970979 D KEGG: dvl:Dvul_1787 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH 1968910..1970979 Desulfovibrio salexigens DSM 2638 8092894 YP_002991395.1 CDS Desal_1794 NC_012881.1 1970993 1971835 D KEGG: dde:Dde_1514 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 1970993..1971835 Desulfovibrio salexigens DSM 2638 8092895 YP_002991396.1 CDS Desal_1795 NC_012881.1 1971835 1972581 D PFAM: protein of unknown function DUF147; KEGG: dvl:Dvul_1785 hypothetical protein; hypothetical protein 1971835..1972581 Desulfovibrio salexigens DSM 2638 8092896 YP_002991397.1 CDS Desal_1796 NC_012881.1 1972586 1973497 D PFAM: YbbR family protein; KEGG: dvm:DvMF_0058 YbbR family protein; hypothetical protein 1972586..1973497 Desulfovibrio salexigens DSM 2638 8092897 YP_002991398.1 CDS glmM NC_012881.1 1973535 1974884 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1973535..1974884 Desulfovibrio salexigens DSM 2638 8092898 YP_002991399.1 CDS Desal_1798 NC_012881.1 1974937 1975806 D PFAM: nucleotidyl transferase; KEGG: dvl:Dvul_1782 UTP-glucose-1-phosphate uridylyltransferase GalU; nucleotidyl transferase 1974937..1975806 Desulfovibrio salexigens DSM 2638 8092899 YP_002991400.1 CDS Desal_1799 NC_012881.1 1975797 1976561 D hypothetical protein 1975797..1976561 Desulfovibrio salexigens DSM 2638 8092900 YP_002991401.1 CDS Desal_1800 NC_012881.1 1976564 1978906 D KEGG: dde:Dde_1519 replication restart DNA helicase PriA; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 1976564..1978906 Desulfovibrio salexigens DSM 2638 8092901 YP_002991402.1 CDS Desal_1801 NC_012881.1 1978991 1980013 R hypothetical protein complement(1978991..1980013) Desulfovibrio salexigens DSM 2638 8092902 YP_002991403.1 CDS Desal_1802 NC_012881.1 1980014 1980757 R PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: dde:Dde_1441 Smr protein/MutS2-like; Smr protein/MutS2 complement(1980014..1980757) Desulfovibrio salexigens DSM 2638 8092903 YP_002991404.1 CDS Desal_1803 NC_012881.1 1981040 1981804 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvl:Dvul_1972 ABC transporter; ABC transporter 1981040..1981804 Desulfovibrio salexigens DSM 2638 8092904 YP_002991405.1 CDS Desal_1804 NC_012881.1 1981830 1982990 D PFAM: SufBD protein; KEGG: dvm:DvMF_0915 SufBD protein; SufBD protein 1981830..1982990 Desulfovibrio salexigens DSM 2638 8092905 YP_002991406.1 CDS Desal_1805 NC_012881.1 1983147 1983596 D KEGG: dde:Dde_1443 hypothetical protein; hypothetical protein 1983147..1983596 Desulfovibrio salexigens DSM 2638 8092906 YP_002991407.1 CDS Desal_1806 NC_012881.1 1983696 1984133 R PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dde:Dde_2078 CBS; hypothetical protein complement(1983696..1984133) Desulfovibrio salexigens DSM 2638 8092907 YP_002991408.1 CDS Desal_1807 NC_012881.1 1984371 1985015 D KEGG: dvm:DvMF_0412 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1984371..1985015 Desulfovibrio salexigens DSM 2638 8092908 YP_002991409.1 CDS Desal_1808 NC_012881.1 1985022 1985981 D PFAM: protein of unknown function DUF368; KEGG: dol:Dole_2007 hypothetical protein; hypothetical protein 1985022..1985981 Desulfovibrio salexigens DSM 2638 8092909 YP_002991410.1 CDS Desal_1809 NC_012881.1 1986036 1986932 D KEGG: dvm:DvMF_0410 Mrp protein; Mrp protein 1986036..1986932 Desulfovibrio salexigens DSM 2638 8092910 YP_002991411.1 CDS Desal_1810 NC_012881.1 1987109 1987654 D TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dvm:DvMF_0409 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1987109..1987654 Desulfovibrio salexigens DSM 2638 8092911 YP_002991412.1 CDS Desal_1811 NC_012881.1 1987694 1987972 D KEGG: dvm:DvMF_0408 hypothetical protein; hypothetical protein 1987694..1987972 Desulfovibrio salexigens DSM 2638 8092912 YP_002991413.1 CDS Desal_1812 NC_012881.1 1987984 1988310 D PFAM: septum formation initiator; KEGG: dvm:DvMF_0407 septum formation initiator; septum formation initiator 1987984..1988310 Desulfovibrio salexigens DSM 2638 8092913 YP_002991414.1 CDS Desal_1813 NC_012881.1 1988294 1989169 D KEGG: dvl:Dvul_1319 hypothetical protein; hypothetical protein 1988294..1989169 Desulfovibrio salexigens DSM 2638 8092914 YP_002991415.1 CDS Desal_1814 NC_012881.1 1989263 1990063 D KEGG: dvm:DvMF_0405 hypothetical protein; hypothetical protein 1989263..1990063 Desulfovibrio salexigens DSM 2638 8092915 YP_002991416.1 CDS Desal_1815 NC_012881.1 1990151 1991167 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1990151..1991167 Desulfovibrio salexigens DSM 2638 8092916 YP_002991417.1 CDS Desal_1816 NC_012881.1 1991167 1992237 D KEGG: dvl:Dvul_1322 metalloendopeptidase glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 1991167..1992237 Desulfovibrio salexigens DSM 2638 8092917 YP_002991418.1 CDS Desal_1817 NC_012881.1 1992453 1992773 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: dde:Dde_2067 thioredoxin; thioredoxin 1992453..1992773 Desulfovibrio salexigens DSM 2638 8092918 YP_002991419.1 CDS Desal_1818 NC_012881.1 1992777 1993697 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_1324 thioredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1992777..1993697 Desulfovibrio salexigens DSM 2638 8092919 YP_002991420.1 CDS Desal_1819 NC_012881.1 1993697 1994428 D TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: dde:Dde_2065 lipoprotein; outer membrane assembly lipoprotein YfiO 1993697..1994428 Desulfovibrio salexigens DSM 2638 8092920 YP_002991421.1 CDS Desal_1820 NC_012881.1 1994512 1995312 D KEGG: dde:Dde_2064 hypothetical protein; hypothetical protein 1994512..1995312 Desulfovibrio salexigens DSM 2638 8092921 YP_002991422.1 CDS Desal_1821 NC_012881.1 1995338 1997386 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1995338..1997386 Desulfovibrio salexigens DSM 2638 8091593 YP_002991423.1 CDS Desal_1822 NC_012881.1 1997406 1997909 D KEGG: dde:Dde_2062 hypothetical protein; hypothetical protein 1997406..1997909 Desulfovibrio salexigens DSM 2638 8094082 YP_002991424.1 CDS Desal_1823 NC_012881.1 1998113 2000287 D PFAM: CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2427 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase 1998113..2000287 Desulfovibrio salexigens DSM 2638 8091373 YP_002991425.1 CDS Desal_1824 NC_012881.1 2000287 2001174 D KEGG: dde:Dde_2105 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 2000287..2001174 Desulfovibrio salexigens DSM 2638 8091374 YP_002991426.1 CDS Desal_1825 NC_012881.1 2001177 2002247 D KEGG: gsu:GSU1145 protein-glutamate methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 2001177..2002247 Desulfovibrio salexigens DSM 2638 8091375 YP_002991427.1 CDS Desal_1826 NC_012881.1 2002254 2002601 R PFAM: protein of unknown function DUF190; KEGG: dde:Dde_2103 hypothetical protein; hypothetical protein complement(2002254..2002601) Desulfovibrio salexigens DSM 2638 8091376 YP_002991428.1 CDS Desal_1827 NC_012881.1 2002635 2003015 R TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: dde:Dde_2102 camphor resistance protein CrcB; CrcB protein complement(2002635..2003015) Desulfovibrio salexigens DSM 2638 8091377 YP_002991429.1 CDS Desal_1828 NC_012881.1 2003085 2003660 D PFAM: adenylate cyclase; KEGG: dde:Dde_2101 adenylate cyclase; adenylate cyclase 2003085..2003660 Desulfovibrio salexigens DSM 2638 8091378 YP_002991430.1 CDS Desal_1829 NC_012881.1 2003786 2004094 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: dde:Dde_2100 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2003786..2004094 Desulfovibrio salexigens DSM 2638 8091379 YP_002991431.1 CDS Desal_1830 NC_012881.1 2004096 2006405 D KEGG: dde:Dde_2099 ATPase; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; ATPase AAA central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; ATP-dependent Clp protease ATP-binding protein ClpA 2004096..2006405 Desulfovibrio salexigens DSM 2638 8091380 YP_002991432.1 CDS Desal_1831 NC_012881.1 2006577 2007299 D KEGG: afw:Anae109_0837 leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 2006577..2007299 Desulfovibrio salexigens DSM 2638 8091381 YP_002991433.1 CDS Desal_1832 NC_012881.1 2007300 2007713 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr3345 glutathione transferase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2007300..2007713) Desulfovibrio salexigens DSM 2638 8091382 YP_002991434.1 CDS Desal_1833 NC_012881.1 2007785 2008282 R KEGG: dvl:Dvul_1530 hypothetical protein; hypothetical protein complement(2007785..2008282) Desulfovibrio salexigens DSM 2638 8091383 YP_002991435.1 CDS Desal_1834 NC_012881.1 2008382 2010388 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2008382..2010388 Desulfovibrio salexigens DSM 2638 8091384 YP_002991436.1 CDS Desal_1835 NC_012881.1 2010424 2011461 D PFAM: TrkA-N domain protein; ion transporter ; TrkA-C domain protein; KEGG: dde:Dde_2095 TrkA family potassium uptake protein; TrkA-N domain-containing protein 2010424..2011461 Desulfovibrio salexigens DSM 2638 8091385 YP_002991437.1 CDS Desal_1836 NC_012881.1 2011650 2013494 D KEGG: dal:Dalk_0040 DNA ligase (NAD(+)); PFAM: NAD-dependent DNA ligase OB-fold; BRCT domain protein; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase ; BRCT domain protein; DNA ligase (NAD(+)) 2011650..2013494 Desulfovibrio salexigens DSM 2638 8091386 YP_002991438.1 CDS Desal_1837 NC_012881.1 2013644 2014426 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 2013644..2014426 Desulfovibrio salexigens DSM 2638 8091387 YP_002991439.1 CDS Desal_1838 NC_012881.1 2014584 2015690 D PFAM: metallophosphoesterase; KEGG: msu:MS1630 hypothetical protein; metallophosphoesterase 2014584..2015690 Desulfovibrio salexigens DSM 2638 8091388 YP_002991440.1 CDS Desal_1839 NC_012881.1 2015736 2016440 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tcx:Tcr_0945 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2015736..2016440) Desulfovibrio salexigens DSM 2638 8091389 YP_002991441.1 CDS Desal_1840 NC_012881.1 2016629 2018698 D KEGG: sfu:Sfum_3254 PAS/PAC sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; GAF sensor signal transduction histidine kinase 2016629..2018698 Desulfovibrio salexigens DSM 2638 8091390 YP_002991442.1 CDS Desal_1841 NC_012881.1 2018691 2019344 D PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: gur:Gura_0759 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 2018691..2019344 Desulfovibrio salexigens DSM 2638 8091391 YP_002991443.1 CDS Desal_1842 NC_012881.1 2019372 2020184 R PFAM: extracellular solute-binding protein family 3; KEGG: dat:HRM2_27460 ABC-type amino acid transporter periplasmic amino-acid binding protein; family 3 extracellular solute-binding protein complement(2019372..2020184) Desulfovibrio salexigens DSM 2638 8091392 YP_002991444.1 CDS Desal_1843 NC_012881.1 2020476 2020802 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: vpa:VP2167 hypothetical protein; antibiotic biosynthesis monooxygenase 2020476..2020802 Desulfovibrio salexigens DSM 2638 8091393 YP_002991445.1 CDS Desal_1844 NC_012881.1 2020841 2021413 D PFAM: flavin reductase domain protein FMN-binding; KEGG: glo:Glov_0126 flavin reductase domain protein FMN-binding; flavin reductase domain-containing protein FMN-binding 2020841..2021413 Desulfovibrio salexigens DSM 2638 8091394 YP_002991446.1 CDS Desal_1845 NC_012881.1 2021429 2021920 D KEGG: dvm:DvMF_1524 flavin reductase domain protein FMN-binding; hypothetical protein 2021429..2021920 Desulfovibrio salexigens DSM 2638 8091395 YP_002991447.1 CDS Desal_1846 NC_012881.1 2021952 2022776 D PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ppd:Ppro_1860 nitroreductase; nitroreductase 2021952..2022776 Desulfovibrio salexigens DSM 2638 8091396 YP_002991448.1 CDS Desal_1847 NC_012881.1 2022873 2023601 D KEGG: cbd:CBUD_1803 hypothetical protein; hypothetical protein 2022873..2023601 Desulfovibrio salexigens DSM 2638 8091397 YP_002991449.1 CDS Desal_1848 NC_012881.1 2023788 2024204 D KEGG: hch:HCH_05645 hypothetical protein; hypothetical protein 2023788..2024204 Desulfovibrio salexigens DSM 2638 8091398 YP_002991450.1 CDS Desal_1849 NC_012881.1 2024280 2025173 D KEGG: vvu:VV2_1593 deacylase; deacylase 2024280..2025173 Desulfovibrio salexigens DSM 2638 8091399 YP_002991451.1 CDS Desal_1851 NC_012881.1 2026363 2026635 R hypothetical protein complement(2026363..2026635) Desulfovibrio salexigens DSM 2638 8091401 YP_002991452.1 CDS Desal_1852 NC_012881.1 2026667 2027296 R hypothetical protein complement(2026667..2027296) Desulfovibrio salexigens DSM 2638 8091402 YP_002991453.1 CDS Desal_1853 NC_012881.1 2027338 2029170 R PFAM: TrkA-C domain protein; citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sfr:Sfri_0290 TrkA-C domain protein; TrkA-C domain-containing protein complement(2027338..2029170) Desulfovibrio salexigens DSM 2638 8091403 YP_002991454.1 CDS Desal_1854 NC_012881.1 2029392 2030000 R KEGG: dvl:Dvul_0600 hypothetical protein; hypothetical protein complement(2029392..2030000) Desulfovibrio salexigens DSM 2638 8091404 YP_002991455.1 CDS Desal_1855 NC_012881.1 2030227 2032743 R PFAM: sigma-54 factor interaction domain-containing protein; histidine kinase HAMP region domain protein; SMART: ATPase AAA; KEGG: dde:Dde_0697 response regulator receiver domain-containing protein; sigma 54 interacting domain protein complement(2030227..2032743) Desulfovibrio salexigens DSM 2638 8091405 YP_002991456.1 CDS Desal_1856 NC_012881.1 2032953 2034626 D PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: dal:Dalk_2245 histidine kinase; histidine kinase 2032953..2034626 Desulfovibrio salexigens DSM 2638 8091406 YP_002991457.1 CDS Desal_1857 NC_012881.1 2034706 2037726 R KEGG: sfu:Sfum_3176 hypothetical protein; hypothetical protein complement(2034706..2037726) Desulfovibrio salexigens DSM 2638 8091407 YP_002991458.1 CDS Desal_1858 NC_012881.1 2037994 2038410 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dal:Dalk_2244 response regulator receiver protein; response regulator receiver protein 2037994..2038410 Desulfovibrio salexigens DSM 2638 8091408 YP_002991459.1 CDS Desal_1859 NC_012881.1 2038453 2039352 D PFAM: response regulator receiver; CBS domain containing protein; SMART: response regulator receiver; KEGG: dat:HRM2_38260 two-component response regulator (CheY-like receiver domain and a winged-helix DNA-binding domain); response regulator receiver protein 2038453..2039352 Desulfovibrio salexigens DSM 2638 8091409 YP_002991460.1 CDS Desal_1860 NC_012881.1 2039385 2041235 D TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter; citrate transporter; KEGG: dal:Dalk_2243 sodium/sulfate symporter; anion transporter 2039385..2041235 Desulfovibrio salexigens DSM 2638 8091410 YP_002991461.1 CDS Desal_1861 NC_012881.1 2041287 2041439 D KEGG: dal:Dalk_2242 hypothetical protein; hypothetical protein 2041287..2041439 Desulfovibrio salexigens DSM 2638 8091411 YP_002991462.1 CDS Desal_1862 NC_012881.1 2041449 2042000 D KEGG: dal:Dalk_2241 hypothetical protein; hypothetical protein 2041449..2042000 Desulfovibrio salexigens DSM 2638 8091412 YP_002991463.1 CDS Desal_1863 NC_012881.1 2042105 2042488 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvm:DvMF_1988 response regulator receiver protein; response regulator receiver protein 2042105..2042488 Desulfovibrio salexigens DSM 2638 8091413 YP_002991464.1 CDS Desal_1864 NC_012881.1 2042504 2045074 D PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: sfu:Sfum_0649 pyruvate, water dikinase; pyruvate water dikinase 2042504..2045074 Desulfovibrio salexigens DSM 2638 8091414 YP_002991465.1 CDS Desal_1865 NC_012881.1 2045071 2046753 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sfu:Sfum_0617 integral membrane sensor signal transduction histidine kinase; histidine kinase 2045071..2046753 Desulfovibrio salexigens DSM 2638 8091415 YP_002991466.1 CDS Desal_1866 NC_012881.1 2046741 2047154 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sfu:Sfum_0618 response regulator receiver protein; response regulator receiver protein 2046741..2047154 Desulfovibrio salexigens DSM 2638 8091416 YP_002991467.1 CDS Desal_1867 NC_012881.1 2047135 2048049 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sfu:Sfum_0619 histidine kinase; histidine kinase 2047135..2048049 Desulfovibrio salexigens DSM 2638 8091417 YP_002991468.1 CDS Desal_1868 NC_012881.1 2048046 2048471 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sfu:Sfum_0632 response regulator receiver protein; response regulator receiver protein 2048046..2048471 Desulfovibrio salexigens DSM 2638 8091418 YP_002991469.1 CDS Desal_1869 NC_012881.1 2048524 2050494 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: dde:Dde_0218 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2048524..2050494 Desulfovibrio salexigens DSM 2638 8091419 YP_002991470.1 CDS Desal_1870 NC_012881.1 2050700 2051794 R hypothetical protein complement(2050700..2051794) Desulfovibrio salexigens DSM 2638 8091420 YP_002991471.1 CDS Desal_1871 NC_012881.1 2051810 2053099 R PFAM: glucose-inhibited division protein A; KEGG: bpt:Bpet0510 hypothetical protein; glucose-inhibited division protein A complement(2051810..2053099) Desulfovibrio salexigens DSM 2638 8091421 YP_002991472.1 CDS Desal_1872 NC_012881.1 2053125 2054108 R KEGG: dal:Dalk_4359 oxidoreductase FAD/NAD(P)-binding domain protein; hypothetical protein complement(2053125..2054108) Desulfovibrio salexigens DSM 2638 8091422 YP_002991473.1 CDS Desal_1873 NC_012881.1 2054127 2054762 R KEGG: ank:AnaeK_3521 hypothetical protein; hypothetical protein complement(2054127..2054762) Desulfovibrio salexigens DSM 2638 8091423 YP_002991474.1 CDS Desal_1874 NC_012881.1 2054793 2055410 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mes:Meso_1864 ABC transporter; ABC transporter complement(2054793..2055410) Desulfovibrio salexigens DSM 2638 8091424 YP_002991475.1 CDS Desal_1875 NC_012881.1 2055392 2056174 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dds:Ddes_0426 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2055392..2056174) Desulfovibrio salexigens DSM 2638 8091425 YP_002991476.1 CDS Desal_1876 NC_012881.1 2056171 2057133 R KEGG: dds:Ddes_0427 hypothetical protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2056171..2057133) Desulfovibrio salexigens DSM 2638 8091426 YP_002991477.1 CDS Desal_1877 NC_012881.1 2057138 2058175 R PFAM: methyltransferase type 12; methyltransferase type 11; O-methyltransferase family 2; KEGG: dds:Ddes_0428 methyltransferase type 12; methyltransferase type 12 complement(2057138..2058175) Desulfovibrio salexigens DSM 2638 8091427 YP_002991478.1 CDS Desal_1878 NC_012881.1 2058177 2060255 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dds:Ddes_0429 TonB-dependent receptor; TonB-dependent receptor complement(2058177..2060255) Desulfovibrio salexigens DSM 2638 8091428 YP_002991479.1 CDS Desal_1879 NC_012881.1 2060365 2061360 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dds:Ddes_0430 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2060365..2061360) Desulfovibrio salexigens DSM 2638 8091429 YP_002991480.1 CDS Desal_1880 NC_012881.1 2062276 2062599 R hypothetical protein complement(2062276..2062599) Desulfovibrio salexigens DSM 2638 8091431 YP_002991481.1 CDS Desal_1881 NC_012881.1 2062729 2062932 D hypothetical protein 2062729..2062932 Desulfovibrio salexigens DSM 2638 8091432 YP_002991482.1 CDS Desal_1882 NC_012881.1 2062938 2064305 R KEGG: dol:Dole_2174 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; response regulator receiver modulated metal dependent phosphohydrolase complement(2062938..2064305) Desulfovibrio salexigens DSM 2638 8091433 YP_002991483.1 CDS Desal_1883 NC_012881.1 2064475 2065236 R KEGG: dal:Dalk_2002 hypothetical protein; hypothetical protein complement(2064475..2065236) Desulfovibrio salexigens DSM 2638 8091434 YP_002991484.1 CDS Desal_1884 NC_012881.1 2065270 2065896 R KEGG: dde:Dde_1191 hypothetical protein; hypothetical protein complement(2065270..2065896) Desulfovibrio salexigens DSM 2638 8091435 YP_002991485.1 CDS Desal_1885 NC_012881.1 2066060 2067463 R KEGG: hypothetical protein; hypothetical protein complement(2066060..2067463) Desulfovibrio salexigens DSM 2638 8091436 YP_002991486.1 CDS Desal_1886 NC_012881.1 2067686 2068465 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: hch:HCH_04060 amino acid ABC transporter periplasmic protein; family 3 extracellular solute-binding protein 2067686..2068465 Desulfovibrio salexigens DSM 2638 8091437 YP_002991487.1 CDS Desal_1887 NC_012881.1 2068475 2068888 R KEGG: dal:Dalk_0979 hypothetical protein; hypothetical protein complement(2068475..2068888) Desulfovibrio salexigens DSM 2638 8091438 YP_002991488.1 CDS Desal_1888 NC_012881.1 2068896 2071193 R KEGG: dde:Dde_0558 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: NMT1/THI5 like domain protein; PAS fold-3 domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(2068896..2071193) Desulfovibrio salexigens DSM 2638 8091439 YP_002991489.1 CDS Desal_1889 NC_012881.1 2071800 2072594 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase complement(2071800..2072594) Desulfovibrio salexigens DSM 2638 8091442 YP_002991490.1 CDS Desal_1890 NC_012881.1 2072743 2072937 D KEGG: sfu:Sfum_0324 hypothetical protein; hypothetical protein 2072743..2072937 Desulfovibrio salexigens DSM 2638 8091443 YP_002991491.1 CDS Desal_1891 NC_012881.1 2073036 2074196 D PFAM: permease YjgP/YjgQ family protein; KEGG: dde:Dde_1948 permease; YjgP/YjgQ family permease 2073036..2074196 Desulfovibrio salexigens DSM 2638 8091444 YP_002991492.1 CDS Desal_1892 NC_012881.1 2074193 2075323 D PFAM: permease YjgP/YjgQ family protein; KEGG: dde:Dde_1949 permease; YjgP/YjgQ family permease 2074193..2075323 Desulfovibrio salexigens DSM 2638 8091445 YP_002991493.1 CDS engB NC_012881.1 2075385 2075990 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2075385..2075990) Desulfovibrio salexigens DSM 2638 8091446 YP_002991494.1 CDS Desal_1894 NC_012881.1 2076118 2076573 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2076118..2076573 Desulfovibrio salexigens DSM 2638 8091447 YP_002991495.1 CDS Desal_1895 NC_012881.1 2076681 2077241 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2076681..2077241 Desulfovibrio salexigens DSM 2638 8091448 YP_002991496.1 CDS Desal_1896 NC_012881.1 2077335 2079590 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: dvl:Dvul_1420 cell division FtsK/SpoIIIE; cell division protein FtsK 2077335..2079590 Desulfovibrio salexigens DSM 2638 8091449 YP_002991497.1 CDS Desal_1897 NC_012881.1 2079655 2080122 R KEGG: rpa:RPA2639 L-2-amino-thiazoline-4-carboxylic acid hydrolase; L-2-amino-thiazoline-4-carboxylic acid hydrolase complement(2079655..2080122) Desulfovibrio salexigens DSM 2638 8091450 YP_002991498.1 CDS Desal_1898 NC_012881.1 2080183 2080827 D TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: dvm:DvMF_0370 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 2080183..2080827 Desulfovibrio salexigens DSM 2638 8091451 YP_002991499.1 CDS Desal_1899 NC_012881.1 2080951 2081706 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: dvm:DvMF_0369 pseudouridine synthase; RNA-binding S4 domain-containing protein complement(2080951..2081706) Desulfovibrio salexigens DSM 2638 8091452 YP_002991500.1 CDS Desal_1900 NC_012881.1 2081875 2082495 R PFAM: SirA family protein; KEGG: dvm:DvMF_0368 hypothetical protein; SirA family protein complement(2081875..2082495) Desulfovibrio salexigens DSM 2638 8090814 YP_002991501.1 CDS Desal_1901 NC_012881.1 2082683 2084446 D PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: dde:Dde_1960 lipid A export ATP-binding/permease protein MsbA; ABC transporter 2082683..2084446 Desulfovibrio salexigens DSM 2638 8092925 YP_002991502.1 CDS Desal_1902 NC_012881.1 2084449 2085093 D PFAM: protein of unknown function DUF374; KEGG: dde:Dde_1961 hypothetical protein; hypothetical protein 2084449..2085093 Desulfovibrio salexigens DSM 2638 8092926 YP_002991503.1 CDS Desal_1903 NC_012881.1 2085175 2087604 R KEGG: dde:Dde_1650 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(2085175..2087604) Desulfovibrio salexigens DSM 2638 8092927 YP_002991504.1 CDS Desal_1904 NC_012881.1 2087899 2088615 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dde:Dde_1151 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2087899..2088615 Desulfovibrio salexigens DSM 2638 8092928 YP_002991505.1 CDS Desal_1905 NC_012881.1 2088609 2089502 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_3069 amino acid ABC transporter permease; polar amino acid ABC transporter permease complement(2088609..2089502) Desulfovibrio salexigens DSM 2638 8092929 YP_002991506.1 CDS Desal_1906 NC_012881.1 2089516 2090391 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: dde:Dde_3070 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(2089516..2090391) Desulfovibrio salexigens DSM 2638 8092930 YP_002991507.1 CDS Desal_1907 NC_012881.1 2090642 2091475 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: dde:Dde_3070 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(2090642..2091475) Desulfovibrio salexigens DSM 2638 8092931 YP_002991508.1 CDS Desal_1908 NC_012881.1 2091504 2092313 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dps:DP0088 glutamine ABC transporter permease (GlnP); polar amino acid ABC transporter permease complement(2091504..2092313) Desulfovibrio salexigens DSM 2638 8092932 YP_002991509.1 CDS Desal_1909 NC_012881.1 2092536 2093294 D KEGG: ppd:Ppro_2991 hypothetical protein; hypothetical protein 2092536..2093294 Desulfovibrio salexigens DSM 2638 8092933 YP_002991510.1 CDS Desal_1910 NC_012881.1 2093358 2094344 R KEGG: dde:Dde_2342 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I complement(2093358..2094344) Desulfovibrio salexigens DSM 2638 8092934 YP_002991511.1 CDS Desal_1911 NC_012881.1 2094576 2095499 R KEGG: dde:Dde_2341 fructose-bisphosphate aldolase; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-1,6-bisphosphate aldolase complement(2094576..2095499) Desulfovibrio salexigens DSM 2638 8092935 YP_002991512.1 CDS Desal_1912 NC_012881.1 2095694 2096449 R KEGG: dde:Dde_2340 exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE complement(2095694..2096449) Desulfovibrio salexigens DSM 2638 8092936 YP_002991513.1 CDS Desal_1913 NC_012881.1 2096609 2097643 D KEGG: dvl:Dvul_1091 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 2096609..2097643 Desulfovibrio salexigens DSM 2638 8092937 YP_002991514.1 CDS Desal_1914 NC_012881.1 2097619 2098272 D KEGG: dde:Dde_2338 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 2097619..2098272 Desulfovibrio salexigens DSM 2638 8092938 YP_002991515.1 CDS Desal_1915 NC_012881.1 2098754 2099701 D KEGG: dde:Dde_2137 hydrogenase (NiFe) small subunit (HydA); TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; hydrogenase (NiFe) small subunit HydA 2098754..2099701 Desulfovibrio salexigens DSM 2638 8092939 YP_002991516.1 CDS Desal_1916 NC_012881.1 2099759 2101468 D PFAM: nickel-dependent hydrogenase large subunit; KEGG: dde:Dde_2138 periplasmic (NiFe) hydrogenase, large subunit, isozyme 1; nickel-dependent hydrogenase large subunit 2099759..2101468 Desulfovibrio salexigens DSM 2638 8092940 YP_002991517.1 CDS Desal_1917 NC_012881.1 2101743 2102234 D TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: dde:Dde_2139 hydrogenase expression/formation protein; hydrogenase expression/formation protein 2101743..2102234 Desulfovibrio salexigens DSM 2638 8092941 YP_002991518.1 CDS Desal_1918 NC_012881.1 2102256 2102513 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: dvm:DvMF_0268 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 2102256..2102513 Desulfovibrio salexigens DSM 2638 8092942 YP_002991519.1 CDS Desal_1919 NC_012881.1 2102587 2103144 R PFAM: C-type lectin domain protein; SMART: C-type lectin domain protein; KEGG: tgr:Tgr7_2353 hypothetical protein; C-type lectin domain protein complement(2102587..2103144) Desulfovibrio salexigens DSM 2638 8092943 YP_002991520.1 CDS Desal_1920 NC_012881.1 2103376 2104482 D TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M42 family protein; KEGG: vfi:VF_A0004 peptidase T-like protein; peptidase T-like protein 2103376..2104482 Desulfovibrio salexigens DSM 2638 8092944 YP_002991521.1 CDS Desal_1921 NC_012881.1 2104558 2105055 D PFAM: protein of unknown function UPF0066; KEGG: dal:Dalk_5286 protein of unknown function UPF0066; hypothetical protein 2104558..2105055 Desulfovibrio salexigens DSM 2638 8092945 YP_002991522.1 CDS Desal_1922 NC_012881.1 2105141 2105554 R PFAM: cytochrome c class III; KEGG: dat:HRM2_47160 cytochrome c, class III family protein; cytochrome c class III complement(2105141..2105554) Desulfovibrio salexigens DSM 2638 8092946 YP_002991523.1 CDS Desal_1923 NC_012881.1 2105572 2106315 R KEGG: dat:HRM2_47150 FdhB8; FdhB8 complement(2105572..2106315) Desulfovibrio salexigens DSM 2638 8092947 YP_002991524.1 CDS Desal_1924 NC_012881.1 2106315 2109374 R KEGG: dat:HRM2_47140 FdhA8; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; formate dehydrogenase subunit alpha complement(2106315..2109374) Desulfovibrio salexigens DSM 2638 8092948 YP_002991525.1 CDS Desal_1925 NC_012881.1 2109786 2110622 R PFAM: methyltransferase type 12; methyltransferase type 11; methyltransferase small; KEGG: dal:Dalk_3686 methyltransferase type 11; methyltransferase type 12 complement(2109786..2110622) Desulfovibrio salexigens DSM 2638 8092949 YP_002991526.1 CDS Desal_1926 NC_012881.1 2110784 2111404 R KEGG: dde:Dde_2000 transport-associated protein; hypothetical protein complement(2110784..2111404) Desulfovibrio salexigens DSM 2638 8092950 YP_002991527.1 CDS Desal_1927 NC_012881.1 2111492 2112553 R TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: dde:Dde_1996 glycine cleavage system T protein; glycine cleavage system T protein complement(2111492..2112553) Desulfovibrio salexigens DSM 2638 8092951 YP_002991528.1 CDS Desal_1928 NC_012881.1 2112614 2114356 R KEGG: dde:Dde_1995 hypothetical protein; hypothetical protein complement(2112614..2114356) Desulfovibrio salexigens DSM 2638 8092952 YP_002991529.1 CDS Desal_1929 NC_012881.1 2114727 2114930 D KEGG: sfu:Sfum_3308 conserved hypothetical cytosolic protein; hypothetical protein 2114727..2114930 Desulfovibrio salexigens DSM 2638 8092953 YP_002991530.1 CDS Desal_1930 NC_012881.1 2114934 2115959 D PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: dde:Dde_1994 hypothetical protein; phytochrome sensor protein 2114934..2115959 Desulfovibrio salexigens DSM 2638 8092954 YP_002991531.1 CDS Desal_1931 NC_012881.1 2115987 2117012 D TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: dde:Dde_1993 rod shape-determining protein MreB; rod shape-determining protein MreB 2115987..2117012 Desulfovibrio salexigens DSM 2638 8092955 YP_002991532.1 CDS Desal_1932 NC_012881.1 2117016 2117789 D PFAM: inositol monophosphatase; KEGG: dvu:DVU1680 inositol-1-monophosphatase; inositol monophosphatase 2117016..2117789 Desulfovibrio salexigens DSM 2638 8092956 YP_002991533.1 CDS Desal_1933 NC_012881.1 2117792 2118307 R PFAM: NUDIX hydrolase; KEGG: dvm:DvMF_0346 NUDIX hydrolase; NUDIX hydrolase complement(2117792..2118307) Desulfovibrio salexigens DSM 2638 8092957 YP_002991534.1 CDS Desal_1934 NC_012881.1 2118439 2118903 D TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: dvm:DvMF_0347 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 2118439..2118903 Desulfovibrio salexigens DSM 2638 8092958 YP_002991535.1 CDS Desal_1935 NC_012881.1 2118940 2120130 D PFAM: phosphoglycerate kinase; KEGG: glo:Glov_1617 phosphoglycerate kinase; phosphoglycerate kinase 2118940..2120130 Desulfovibrio salexigens DSM 2638 8092959 YP_002991536.1 CDS Desal_1936 NC_012881.1 2120130 2120885 D TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: dvm:DvMF_0348 triose-phosphate isomerase; triosephosphate isomerase 2120130..2120885 Desulfovibrio salexigens DSM 2638 8092960 YP_002991537.1 CDS Desal_1937 NC_012881.1 2120929 2121267 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: dvl:Dvul_1411 preprotein translocase subunit SecG; preprotein translocase subunit SecG 2120929..2121267 Desulfovibrio salexigens DSM 2638 8092961 YP_002991538.1 CDS Desal_1939 NC_012881.1 2122530 2122898 D PFAM: protein of unknown function DUF1486; KEGG: cti:RALTA_B0266 hypothetical protein; hypothetical protein 2122530..2122898 Desulfovibrio salexigens DSM 2638 8092966 YP_002991539.1 CDS Desal_1940 NC_012881.1 2122904 2123362 D PFAM: GCN5-related N-acetyltransferase; KEGG: sbm:Shew185_2662 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2122904..2123362 Desulfovibrio salexigens DSM 2638 8092967 YP_002991540.1 CDS Desal_1941 NC_012881.1 2123829 2123963 R hypothetical protein complement(2123829..2123963) Desulfovibrio salexigens DSM 2638 8092969 YP_002991541.1 CDS Desal_1942 NC_012881.1 2123985 2124089 R hypothetical protein complement(2123985..2124089) Desulfovibrio salexigens DSM 2638 8092970 YP_002991542.1 CDS Desal_1943 NC_012881.1 2124092 2124340 R KEGG: sbn:Sbal195_1984 hypothetical protein; hypothetical protein complement(2124092..2124340) Desulfovibrio salexigens DSM 2638 8092971 YP_002991543.1 CDS Desal_1944 NC_012881.1 2124509 2125198 R PFAM: DNA alkylation repair enzyme; KEGG: hypothetical protein; DNA alkylation repair protein complement(2124509..2125198) Desulfovibrio salexigens DSM 2638 8092972 YP_002991544.1 CDS Desal_1945 NC_012881.1 2125199 2126572 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: TrkA-N domain protein; ion transporter ; Hemerythrin HHE cation binding domain protein; KEGG: gbm:Gbem_3794 TrkA-N domain protein; hemerythrin-like metal-binding protein complement(2125199..2126572) Desulfovibrio salexigens DSM 2638 8092973 YP_002991545.1 CDS Desal_1946 NC_012881.1 2126773 2126967 D hypothetical protein 2126773..2126967 Desulfovibrio salexigens DSM 2638 8092974 YP_002991546.1 CDS Desal_1947 NC_012881.1 2126984 2128237 D KEGG: swp:swp_3566 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2126984..2128237 Desulfovibrio salexigens DSM 2638 8092975 YP_002991547.1 CDS Desal_1948 NC_012881.1 2128316 2130403 R KEGG: sde:Sde_3566 coenzyme A biosynthesis protein; hypothetical protein complement(2128316..2130403) Desulfovibrio salexigens DSM 2638 8092976 YP_002991548.1 CDS Desal_1949 NC_012881.1 2130997 2131590 R KEGG: dvl:Dvul_1428 translaldolase; translaldolase complement(2130997..2131590) Desulfovibrio salexigens DSM 2638 8092977 YP_002991549.1 CDS Desal_1950 NC_012881.1 2131675 2131941 R KEGG: dvl:Dvul_1429 TRASH domain-containing protein; TRASH domain-containing protein complement(2131675..2131941) Desulfovibrio salexigens DSM 2638 8092978 YP_002991550.1 CDS Desal_1951 NC_012881.1 2131999 2132445 R TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: dvm:DvMF_0362 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2131999..2132445) Desulfovibrio salexigens DSM 2638 8092979 YP_002991551.1 CDS Desal_1952 NC_012881.1 2132493 2133659 R catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis; LL-diaminopimelate aminotransferase complement(2132493..2133659) Desulfovibrio salexigens DSM 2638 8092980 YP_002991552.1 CDS Desal_1953 NC_012881.1 2133775 2134689 D TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dde:Dde_1971 tyrosine recombinase XerD subunit; tyrosine recombinase XerD 2133775..2134689 Desulfovibrio salexigens DSM 2638 8092981 YP_002991553.1 CDS Desal_1954 NC_012881.1 2134700 2137375 D PFAM: polynucleotide adenylyltransferase region; phosphoesterase DHHA1; CBS domain containing protein; phosphoesterase RecJ domain protein; SMART: CBS domain containing protein; KEGG: dde:Dde_1972 CBS; polynucleotide adenylyltransferase 2134700..2137375 Desulfovibrio salexigens DSM 2638 8092982 YP_002991554.1 CDS Desal_1955 NC_012881.1 2137686 2138174 D PFAM: histidine triad (HIT) protein; KEGG: dvl:Dvul_1434 histidine triad (HIT) protein; histidine triad (HIT) protein 2137686..2138174 Desulfovibrio salexigens DSM 2638 8092983 YP_002991555.1 CDS Desal_1956 NC_012881.1 2138195 2138551 D KEGG: dde:Dde_1974 hypothetical protein; hypothetical protein 2138195..2138551 Desulfovibrio salexigens DSM 2638 8092984 YP_002991556.1 CDS Desal_1957 NC_012881.1 2138577 2139716 D SMART: hypothetical protein; KEGG: dvl:Dvul_1436 tetratricopeptide domain-containing protein; hypothetical protein 2138577..2139716 Desulfovibrio salexigens DSM 2638 8092985 YP_002991557.1 CDS Desal_1958 NC_012881.1 2139734 2142391 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2139734..2142391 Desulfovibrio salexigens DSM 2638 8092986 YP_002991558.1 CDS Desal_1959 NC_012881.1 2142391 2142843 D KEGG: dvl:Dvul_1438 lipoprotein; lipoprotein 2142391..2142843 Desulfovibrio salexigens DSM 2638 8092987 YP_002991559.1 CDS Desal_1960 NC_012881.1 2142868 2144106 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dvm:DvMF_0353 diaminopimelate decarboxylase; diaminopimelate decarboxylase 2142868..2144106 Desulfovibrio salexigens DSM 2638 8092988 YP_002991560.1 CDS Desal_1961 NC_012881.1 2144217 2144936 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2144217..2144936 Desulfovibrio salexigens DSM 2638 8092989 YP_002991561.1 CDS Desal_1962 NC_012881.1 2144956 2146218 D PFAM: ATPase AAA central domain protein; SMART: ATPase AAA; KEGG: dvl:Dvul_1401 recombination factor protein RarA; recombination factor protein RarA 2144956..2146218 Desulfovibrio salexigens DSM 2638 8092990 YP_002991562.1 CDS Desal_1963 NC_012881.1 2146426 2147568 D KEGG: dde:Dde_3206 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS/PAC sensor signal transduction histidine kinase 2146426..2147568 Desulfovibrio salexigens DSM 2638 8092991 YP_002991563.1 CDS Desal_1964 NC_012881.1 2147545 2148765 R PFAM: Metal-dependent hydrolase HDOD; metal-dependent phosphohydrolase HD sub domain; KEGG: dde:Dde_1197 signal transduction protein; metal dependent phosphohydrolase complement(2147545..2148765) Desulfovibrio salexigens DSM 2638 8092992 YP_002991564.1 CDS Desal_1965 NC_012881.1 2148796 2149674 R KEGG: dde:Dde_1573 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR complement(2148796..2149674) Desulfovibrio salexigens DSM 2638 8092993 YP_002991565.1 CDS Desal_1966 NC_012881.1 2149776 2151050 R KEGG: dvm:DvMF_0300 CgeB family protein; CgeB family protein complement(2149776..2151050) Desulfovibrio salexigens DSM 2638 8092994 YP_002991566.1 CDS Desal_1967 NC_012881.1 2151067 2152287 R PFAM: glycosyl transferase family 9; KEGG: dvu:DVU1464 heptosyltransferase family protein; glycosyl transferase family protein complement(2151067..2152287) Desulfovibrio salexigens DSM 2638 8092995 YP_002991567.1 CDS Desal_1968 NC_012881.1 2152392 2153069 D TIGRFAM: siroheme synthase; KEGG: dvm:DvMF_0298 siroheme synthase; siroheme synthase 2152392..2153069 Desulfovibrio salexigens DSM 2638 8092996 YP_002991568.1 CDS Desal_1969 NC_012881.1 2153056 2153883 D PFAM: cytochrome c assembly protein; KEGG: dvm:DvMF_0297 cytochrome c assembly protein; cytochrome c assembly protein 2153056..2153883 Desulfovibrio salexigens DSM 2638 8092997 YP_002991569.1 CDS hemA NC_012881.1 2153885 2155204 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2153885..2155204 Desulfovibrio salexigens DSM 2638 8092998 YP_002991570.1 CDS Desal_1971 NC_012881.1 2155217 2155552 D KEGG: dvl:Dvul_1619 hypothetical protein; hypothetical protein 2155217..2155552 Desulfovibrio salexigens DSM 2638 8092999 YP_002991571.1 CDS Desal_1972 NC_012881.1 2155560 2156582 D TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: dde:Dde_2027 ketose-bisphosphate aldolase, class-II; tRNA(Ile)-lysidine synthetase 2155560..2156582 Desulfovibrio salexigens DSM 2638 8093000 YP_002991572.1 CDS Desal_1973 NC_012881.1 2156655 2157326 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2156655..2157326 Desulfovibrio salexigens DSM 2638 8093001 YP_002991573.1 CDS Desal_1974 NC_012881.1 2157496 2158920 R KEGG: dal:Dalk_5167 hexapaptide repeat-containing transferase; hexapaptide repeat-containing transferase complement(2157496..2158920) Desulfovibrio salexigens DSM 2638 8093002 YP_002991574.1 CDS Desal_1975 NC_012881.1 2159155 2160507 R KEGG: dde:Dde_1832 magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; SMART: CBS domain containing protein; magnesium transporter complement(2159155..2160507) Desulfovibrio salexigens DSM 2638 8093003 YP_002991575.1 CDS Desal_1976 NC_012881.1 2160679 2161554 D KEGG: dvm:DvMF_0524 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 2160679..2161554 Desulfovibrio salexigens DSM 2638 8093004 YP_002991576.1 CDS Desal_1977 NC_012881.1 2161566 2162588 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2161566..2162588 Desulfovibrio salexigens DSM 2638 8093005 YP_002991577.1 CDS Desal_1978 NC_012881.1 2162663 2164243 D TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: dde:Dde_1829 L-aspartate oxidase; L-aspartate oxidase 2162663..2164243 Desulfovibrio salexigens DSM 2638 8093006 YP_002991578.1 CDS Desal_1979 NC_012881.1 2164317 2165771 R TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: dde:Dde_2029 K+ transporter trk; TrkH family potassium uptake protein complement(2164317..2165771) Desulfovibrio salexigens DSM 2638 8093007 YP_002991579.1 CDS trkA NC_012881.1 2165771 2167138 R involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein complement(2165771..2167138) Desulfovibrio salexigens DSM 2638 8093008 YP_002991580.1 CDS rpsT NC_012881.1 2167323 2167586 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(2167323..2167586) Desulfovibrio salexigens DSM 2638 8093009 YP_002991581.1 CDS Desal_1982 NC_012881.1 2167766 2169859 R KEGG: dvm:DvMF_0291 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(2167766..2169859) Desulfovibrio salexigens DSM 2638 8093010 YP_002991582.1 CDS glyQ NC_012881.1 2169876 2170748 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(2169876..2170748) Desulfovibrio salexigens DSM 2638 8092010 YP_002991583.1 CDS Desal_1984 NC_012881.1 2170899 2171639 R TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: dvl:Dvul_1264 DNA repair protein RecO; DNA repair protein RecO complement(2170899..2171639) Desulfovibrio salexigens DSM 2638 8093414 YP_002991584.1 CDS Desal_1985 NC_012881.1 2171656 2172534 R SMART: helix-turn-helix domain protein; KEGG: dde:Dde_2036 XRE family transcriptional regulator; XRE family transcriptional regulator complement(2171656..2172534) Desulfovibrio salexigens DSM 2638 8093415 YP_002991585.1 CDS Desal_1986 NC_012881.1 2172640 2173578 R PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dvm:DvMF_0287 SurA domain protein; SurA domain-containing protein complement(2172640..2173578) Desulfovibrio salexigens DSM 2638 8093416 YP_002991586.1 CDS Desal_1987 NC_012881.1 2173709 2174668 R KEGG: dde:Dde_2038 hypothetical protein; hypothetical protein complement(2173709..2174668) Desulfovibrio salexigens DSM 2638 8093417 YP_002991587.1 CDS Desal_1988 NC_012881.1 2174702 2178151 R KEGG: dde:Dde_2039 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor complement(2174702..2178151) Desulfovibrio salexigens DSM 2638 8093418 YP_002991588.1 CDS Desal_1989 NC_012881.1 2178321 2178800 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: dvl:Dvul_1259 CheW protein; CheW protein complement(2178321..2178800) Desulfovibrio salexigens DSM 2638 8093419 YP_002991589.1 CDS Desal_1990 NC_012881.1 2179047 2179262 D KEGG: dvm:DvMF_0283 hypothetical protein; hypothetical protein 2179047..2179262 Desulfovibrio salexigens DSM 2638 8093420 YP_002991590.1 CDS Desal_1991 NC_012881.1 2179323 2180669 R KEGG: dvm:DvMF_0282 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(2179323..2180669) Desulfovibrio salexigens DSM 2638 8093421 YP_002991591.1 CDS Desal_1992 NC_012881.1 2180945 2181670 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2180945..2181670 Desulfovibrio salexigens DSM 2638 8093422 YP_002991592.1 CDS acpS NC_012881.1 2181674 2182048 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2181674..2182048 Desulfovibrio salexigens DSM 2638 8093423 YP_002991593.1 CDS Desal_1994 NC_012881.1 2182140 2183675 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: dvm:DvMF_0279 carbohydrate kinase, YjeF related protein; carbohydrate kinase 2182140..2183675 Desulfovibrio salexigens DSM 2638 8093424 YP_002991594.1 CDS Desal_1995 NC_012881.1 2183669 2184118 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dvl:Dvul_1253 CBS domain-containing protein; hypothetical protein 2183669..2184118 Desulfovibrio salexigens DSM 2638 8093425 YP_002991595.1 CDS Desal_1996 NC_012881.1 2184121 2184615 D PFAM: protein of unknown function UPF0079; KEGG: dde:Dde_2047 hypothetical protein; hypothetical protein 2184121..2184615 Desulfovibrio salexigens DSM 2638 8093426 YP_002991596.1 CDS Desal_1997 NC_012881.1 2184654 2185892 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2184654..2185892 Desulfovibrio salexigens DSM 2638 8093427 YP_002991597.1 CDS Desal_1998 NC_012881.1 2185896 2187497 D TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; KEGG: dde:Dde_2049 alpha-isopropylmalate/homocitrate synthase family transferase; alpha-isopropylmalate/homocitrate synthase 2185896..2187497 Desulfovibrio salexigens DSM 2638 8093428 YP_002991598.1 CDS Desal_1999 NC_012881.1 2187482 2188321 D PFAM: beta-lactamase domain protein; KEGG: gbm:Gbem_3848 beta-lactamase domain protein; beta-lactamase 2187482..2188321 Desulfovibrio salexigens DSM 2638 8093429 YP_002991599.1 CDS Desal_2000 NC_012881.1 2188402 2190633 R PFAM: glycoside hydrolase family 57; KEGG: dvl:Dvul_0769 glycoside hydrolase family protein; glycoside hydrolase family protein complement(2188402..2190633) Desulfovibrio salexigens DSM 2638 8093430 YP_002991600.1 CDS Desal_2001 NC_012881.1 2190790 2191335 R hypothetical protein complement(2190790..2191335) Desulfovibrio salexigens DSM 2638 8093431 YP_002991601.1 CDS Desal_2002 NC_012881.1 2191562 2191981 R KEGG: dvl:Dvul_2011 hypothetical protein; hypothetical protein complement(2191562..2191981) Desulfovibrio salexigens DSM 2638 8093432 YP_002991602.1 CDS Desal_2003 NC_012881.1 2192207 2192467 D hypothetical protein 2192207..2192467 Desulfovibrio salexigens DSM 2638 8093433 YP_002991603.1 CDS ileS NC_012881.1 2192737 2195550 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2192737..2195550 Desulfovibrio salexigens DSM 2638 8093434 YP_002991604.1 CDS Desal_2005 NC_012881.1 2195717 2196187 D TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: lip:LI1052 lipoprotein signal peptidase; lipoprotein signal peptidase 2195717..2196187 Desulfovibrio salexigens DSM 2638 8093435 YP_002991605.1 CDS Desal_2006 NC_012881.1 2196189 2196944 D TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: dal:Dalk_1768 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2196189..2196944 Desulfovibrio salexigens DSM 2638 8093436 YP_002991606.1 CDS Desal_2007 NC_012881.1 2196944 2197180 D KEGG: dat:HRM2_03960 hypothetical protein; hypothetical protein 2196944..2197180 Desulfovibrio salexigens DSM 2638 8093437 YP_002991607.1 CDS Desal_2008 NC_012881.1 2197170 2198093 D TIGRFAM: tol-pal system protein YbgF; KEGG: dde:Dde_2145 TPR domain-containing protein; tol-pal system protein YbgF 2197170..2198093 Desulfovibrio salexigens DSM 2638 8093438 YP_002991608.1 CDS Desal_2009 NC_012881.1 2198113 2198541 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2146 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 2198113..2198541 Desulfovibrio salexigens DSM 2638 8093439 YP_002991609.1 CDS Desal_2010 NC_012881.1 2198569 2199081 D KEGG: dde:Dde_2147 hypothetical protein; hypothetical protein 2198569..2199081 Desulfovibrio salexigens DSM 2638 8093440 YP_002991610.1 CDS Desal_2011 NC_012881.1 2199124 2199867 D KEGG: dvm:DvMF_0261 chemotaxis phosphatase, CheZ; chemotaxis phosphatase, CheZ 2199124..2199867 Desulfovibrio salexigens DSM 2638 8093441 YP_002991611.1 CDS Desal_2012 NC_012881.1 2199982 2201391 R PFAM: TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein; hypothetical protein complement(2199982..2201391) Desulfovibrio salexigens DSM 2638 8093442 YP_002991612.1 CDS Desal_2013 NC_012881.1 2201571 2202875 R PFAM: Na+/H+ antiporter NhaC; KEGG: dvu:DVU1978 Na+/H+ antiporter family protein; Na+/H+ antiporter NhaC complement(2201571..2202875) Desulfovibrio salexigens DSM 2638 8093443 YP_002991613.1 CDS Desal_2014 NC_012881.1 2203179 2204360 R KEGG: dvm:DvMF_2756 phosphoribosylglycinamide formyltransferase 2; TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide formyltransferase 2 complement(2203179..2204360) Desulfovibrio salexigens DSM 2638 8093444 YP_002991614.1 CDS Desal_2015 NC_012881.1 2204546 2205124 D TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: dvm:DvMF_2128 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2204546..2205124 Desulfovibrio salexigens DSM 2638 8093445 YP_002991615.1 CDS Desal_2016 NC_012881.1 2205128 2205811 D PFAM: beta-lactamase domain protein; KEGG: dde:Dde_0151 metallo-beta-lactamase family protein; beta-lactamase 2205128..2205811 Desulfovibrio salexigens DSM 2638 8093446 YP_002991616.1 CDS Desal_2017 NC_012881.1 2205897 2207705 R KEGG: lip:LI0701 nuclease subunit of the excinuclease complex; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; UvrB/UvrC protein; SMART: excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C complement(2205897..2207705) Desulfovibrio salexigens DSM 2638 8093447 YP_002991617.1 CDS Desal_2018 NC_012881.1 2207985 2209367 D KEGG: dvu:DVU0799 hypothetical protein; hypothetical protein 2207985..2209367 Desulfovibrio salexigens DSM 2638 8093448 YP_002991618.1 CDS Desal_2019 NC_012881.1 2209768 2211150 D KEGG: dvm:DvMF_2846 hypothetical protein; hypothetical protein 2209768..2211150 Desulfovibrio salexigens DSM 2638 8093449 YP_002991619.1 CDS hisD NC_012881.1 2211342 2212646 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2211342..2212646 Desulfovibrio salexigens DSM 2638 8093450 YP_002991620.1 CDS Desal_2021 NC_012881.1 2212659 2213558 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 2212659..2213558 Desulfovibrio salexigens DSM 2638 8093451 YP_002991621.1 CDS Desal_2022 NC_012881.1 2213597 2214361 D KEGG: dvm:DvMF_2816 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2213597..2214361 Desulfovibrio salexigens DSM 2638 8093452 YP_002991622.1 CDS Desal_2023 NC_012881.1 2214533 2214844 D TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: dds:Ddes_2024 ribosomal protein S6; 30S ribosomal protein S6 2214533..2214844 Desulfovibrio salexigens DSM 2638 8093453 YP_002991623.1 CDS rpsR NC_012881.1 2214847 2215107 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2214847..2215107 Desulfovibrio salexigens DSM 2638 8093454 YP_002991624.1 CDS rplI NC_012881.1 2215117 2215650 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2215117..2215650 Desulfovibrio salexigens DSM 2638 8093455 YP_002991625.1 CDS Desal_2026 NC_012881.1 2215625 2217052 D TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: dde:Dde_1409 primary replicative DNA helicase; replicative DNA helicase 2215625..2217052 Desulfovibrio salexigens DSM 2638 8093456 YP_002991626.1 CDS Desal_2027 NC_012881.1 2217106 2218401 D KEGG: dvm:DvMF_1153 phenylacetate--CoA ligase; phenylacetate--CoA ligase 2217106..2218401 Desulfovibrio salexigens DSM 2638 8093457 YP_002991627.1 CDS Desal_2028 NC_012881.1 2218405 2218908 D PFAM: protein of unknown function DUF456; KEGG: dde:Dde_0973 hypothetical protein; hypothetical protein 2218405..2218908 Desulfovibrio salexigens DSM 2638 8093458 YP_002991628.1 CDS Desal_2029 NC_012881.1 2219133 2220584 D TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dde:Dde_0171 L-threonine synthase; threonine synthase 2219133..2220584 Desulfovibrio salexigens DSM 2638 8093459 YP_002991629.1 CDS Desal_2030 NC_012881.1 2220585 2221328 D TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: dde:Dde_2981 hemolysin A; hemolysin A 2220585..2221328 Desulfovibrio salexigens DSM 2638 8093460 YP_002991630.1 CDS Desal_2031 NC_012881.1 2221793 2223085 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: dvl:Dvul_1804 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 2221793..2223085 Desulfovibrio salexigens DSM 2638 8093461 YP_002991631.1 CDS Desal_2032 NC_012881.1 2223162 2224718 R KEGG: dvm:DvMF_2628 hypothetical protein; hypothetical protein complement(2223162..2224718) Desulfovibrio salexigens DSM 2638 8093462 YP_002991632.1 CDS Desal_2033 NC_012881.1 2224932 2225918 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: pca:Pcar_1807 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 2224932..2225918 Desulfovibrio salexigens DSM 2638 8093463 YP_002991633.1 CDS Desal_2034 NC_012881.1 2226002 2226736 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: smd:Smed_4709 methyltransferase type 11; methyltransferase type 11 complement(2226002..2226736) Desulfovibrio salexigens DSM 2638 8093464 YP_002991634.1 CDS Desal_2035 NC_012881.1 2226747 2227571 R PFAM: DSBA oxidoreductase; KEGG: dvl:Dvul_2927 DsbA oxidoreductase; DSBA oxidoreductase complement(2226747..2227571) Desulfovibrio salexigens DSM 2638 8093465 YP_002991635.1 CDS Desal_2036 NC_012881.1 2227659 2228099 R KEGG: neu:NE0096 hypothetical protein; hypothetical protein complement(2227659..2228099) Desulfovibrio salexigens DSM 2638 8093466 YP_002991636.1 CDS Desal_2037 NC_012881.1 2228253 2231831 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; KEGG: dde:Dde_2080 phosphoenolpyruvate synthase; pyruvate phosphate dikinase complement(2228253..2231831) Desulfovibrio salexigens DSM 2638 8093467 YP_002991637.1 CDS Desal_2038 NC_012881.1 2232135 2233058 R TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: dvm:DvMF_0418 biotin/acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase complement(2232135..2233058) Desulfovibrio salexigens DSM 2638 8093468 YP_002991638.1 CDS Desal_2039 NC_012881.1 2233173 2234312 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bxe:Bxe_C1377 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator complement(2233173..2234312) Desulfovibrio salexigens DSM 2638 8093469 YP_002991639.1 CDS Desal_2040 NC_012881.1 2234314 2235489 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bpy:Bphyt_4598 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator complement(2234314..2235489) Desulfovibrio salexigens DSM 2638 8093470 YP_002991640.1 CDS Desal_2041 NC_012881.1 2235528 2236208 R PFAM: hypothetical protein; KEGG: dal:Dalk_3002 hypothetical protein; hypothetical protein complement(2235528..2236208) Desulfovibrio salexigens DSM 2638 8093471 YP_002991641.1 CDS Desal_2042 NC_012881.1 2236298 2237461 D PFAM: polynucleotide adenylyltransferase region; KEGG: dvl:Dvul_1326 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 2236298..2237461 Desulfovibrio salexigens DSM 2638 8093472 YP_002991642.1 CDS Desal_2043 NC_012881.1 2237462 2237953 R KEGG: dvm:DvMF_2776 hypothetical protein; hypothetical protein complement(2237462..2237953) Desulfovibrio salexigens DSM 2638 8093473 YP_002991643.1 CDS Desal_2044 NC_012881.1 2237950 2238735 R KEGG: dvu:DVU1034 hypothetical protein; hypothetical protein complement(2237950..2238735) Desulfovibrio salexigens DSM 2638 8093474 YP_002991644.1 CDS Desal_2045 NC_012881.1 2238997 2241093 D PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: dde:Dde_2334 succinyl-CoA synthetase (ADP-forming) alpha subunit / succinyl-CoA synthetase (ADP-forming) beta subunit; CoA-binding protein 2238997..2241093 Desulfovibrio salexigens DSM 2638 8093475 YP_002991645.1 CDS Desal_2046 NC_012881.1 2241086 2242177 D PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_0195 glycosyl transferase, group 1; group 1 glycosyl transferase 2241086..2242177 Desulfovibrio salexigens DSM 2638 8093476 YP_002991646.1 CDS Desal_2047 NC_012881.1 2242285 2243022 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvm:DvMF_1046 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2242285..2243022 Desulfovibrio salexigens DSM 2638 8093477 YP_002991647.1 CDS Desal_2048 NC_012881.1 2243045 2243518 R TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: dvm:DvMF_0272 hydrogenase maturation protease; hydrogenase maturation protease complement(2243045..2243518) Desulfovibrio salexigens DSM 2638 8093478 YP_002991648.1 CDS Desal_2049 NC_012881.1 2243817 2245280 R PFAM: nickel-dependent hydrogenase large subunit; KEGG: dde:Dde_2135 periplasmic (NiFeSe) hydrogenase, large subunit, selenocysteine-containing; nickel-dependent hydrogenase large subunit complement(2243817..2245280) Desulfovibrio salexigens DSM 2638 8093479 YP_002991649.1 CDS Desal_2050 NC_012881.1 2245304 2246251 R TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dvl:Dvul_1249 hydrogenase (NiFe) small subunit HydA; hydrogenase (NiFe) small subunit HydA complement(2245304..2246251) Desulfovibrio salexigens DSM 2638 8093480 YP_002991650.1 CDS Desal_2051 NC_012881.1 2246536 2247852 D PFAM: peptidase M23; KEGG: dvl:Dvul_1311 peptidase M23B; peptidase M23 2246536..2247852 Desulfovibrio salexigens DSM 2638 8093481 YP_002991651.1 CDS Desal_2052 NC_012881.1 2247908 2249038 R PFAM: YibE/F family protein; KEGG: dat:HRM2_01870 uncharacterized conserved multi-transmembrane protein; hypothetical protein complement(2247908..2249038) Desulfovibrio salexigens DSM 2638 8093482 YP_002991652.1 CDS Desal_2053 NC_012881.1 2249236 2250789 R PFAM: alkaline phosphatase; SMART: alkaline phosphatase; KEGG: dat:HRM2_01880 PhoA; alkaline phosphatase complement(2249236..2250789) Desulfovibrio salexigens DSM 2638 8093483 YP_002991653.1 CDS Desal_2054 NC_012881.1 2251304 2252098 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ppd:Ppro_2081 ABC transporter; ABC transporter complement(2251304..2252098) Desulfovibrio salexigens DSM 2638 8093484 YP_002991654.1 CDS Desal_2055 NC_012881.1 2252101 2253183 R PFAM: ABC transporter permease; ABC transporter; KEGG: sfu:Sfum_0494 ABC transporter permease; ABC transporter permease complement(2252101..2253183) Desulfovibrio salexigens DSM 2638 8093485 YP_002991655.1 CDS Desal_2056 NC_012881.1 2253190 2254407 R PFAM: periplasmic binding protein; KEGG: ccv:CCV52592_1559 iron chelatin ABC transporter substrate binding protein; periplasmic binding protein complement(2253190..2254407) Desulfovibrio salexigens DSM 2638 8093486 YP_002991656.1 CDS Desal_2057 NC_012881.1 2254723 2255013 D hypothetical protein 2254723..2255013 Desulfovibrio salexigens DSM 2638 8093487 YP_002991657.1 CDS Desal_2058 NC_012881.1 2255010 2256149 R PFAM: beta-lactamase; KEGG: dal:Dalk_1093 serine-type D-Ala-D-Ala carboxypeptidase; beta-lactamase complement(2255010..2256149) Desulfovibrio salexigens DSM 2638 8093488 YP_002991658.1 CDS Desal_2059 NC_012881.1 2256265 2258718 R KEGG: dvl:Dvul_1732 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; ATPase AAA; ATP-dependent protease La complement(2256265..2258718) Desulfovibrio salexigens DSM 2638 8093489 YP_002991659.1 CDS Desal_2060 NC_012881.1 2259028 2261733 R KEGG: dvl:Dvul_0316 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein; signal transduction histidine kinase, nitrogen specific, NtrB complement(2259028..2261733) Desulfovibrio salexigens DSM 2638 8093490 YP_002991660.1 CDS clpX NC_012881.1 2261925 2263178 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(2261925..2263178) Desulfovibrio salexigens DSM 2638 8093491 YP_002991661.1 CDS Desal_2062 NC_012881.1 2263185 2263793 R KEGG: nam:NAMH_1731 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP complement(2263185..2263793) Desulfovibrio salexigens DSM 2638 8093492 YP_002991662.1 CDS Desal_2063 NC_012881.1 2264049 2265356 R TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type; KEGG: dde:Dde_2222 trigger factor; trigger factor complement(2264049..2265356) Desulfovibrio salexigens DSM 2638 8093493 YP_002991663.1 CDS Desal_2064 NC_012881.1 2265662 2265976 R KEGG: dvm:DvMF_1816 TPR repeat-containing protein; hypothetical protein complement(2265662..2265976) Desulfovibrio salexigens DSM 2638 8093252 YP_002991664.1 CDS Desal_2065 NC_012881.1 2266160 2267155 R PFAM: Bile acid:sodium symporter; KEGG: glo:Glov_2603 bile acid:sodium symporter; bile acid:sodium symporter complement(2266160..2267155) Desulfovibrio salexigens DSM 2638 8093253 YP_002991665.1 CDS Desal_2066 NC_012881.1 2267279 2267959 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: dde:Dde_2644 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator 2267279..2267959 Desulfovibrio salexigens DSM 2638 8093254 YP_002991666.1 CDS Desal_2067 NC_012881.1 2268054 2268641 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: kpe:KPK_4501 translocator protein, LysE family; lysine exporter protein LysE/YggA 2268054..2268641 Desulfovibrio salexigens DSM 2638 8093255 YP_002991667.1 CDS Desal_2068 NC_012881.1 2268653 2269438 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_2719 transcriptional regulator, AraC family; AraC family transcriptional regulator 2268653..2269438 Desulfovibrio salexigens DSM 2638 8093256 YP_002991668.1 CDS Desal_2069 NC_012881.1 2269439 2269843 R hypothetical protein complement(2269439..2269843) Desulfovibrio salexigens DSM 2638 8093257 YP_002991669.1 CDS Desal_2070 NC_012881.1 2269975 2270445 R KEGG: sbp:Sbal223_1287 hypothetical protein; hypothetical protein complement(2269975..2270445) Desulfovibrio salexigens DSM 2638 8093258 YP_002991670.1 CDS Desal_2071 NC_012881.1 2270581 2272146 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: dvm:DvMF_1118 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2270581..2272146) Desulfovibrio salexigens DSM 2638 8093259 YP_002991671.1 CDS Desal_2072 NC_012881.1 2272981 2274396 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: hch:HCH_06116 membrane-fusion protein; HlyD family type I secretion membrane fusion protein complement(2272981..2274396) Desulfovibrio salexigens DSM 2638 8093261 YP_002991672.1 CDS Desal_2073 NC_012881.1 2274380 2276536 R KEGG: hch:HCH_06117 bacteriocin/lantibiotic ABC transporter; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter; peptidase C39 bacteriocin processing; ABC transporter transmembrane protein; SMART: ATPase AAA; type I secretion system ATPase complement(2274380..2276536) Desulfovibrio salexigens DSM 2638 8093262 YP_002991673.1 CDS Desal_2074 NC_012881.1 2276623 2278833 R KEGG: swp:swp_1383 hemolysin-type calcium-binding region; hemolysin-type calcium-binding region complement(2276623..2278833) Desulfovibrio salexigens DSM 2638 8093263 YP_002991674.1 CDS Desal_2075 NC_012881.1 2278875 2280323 R KEGG: rpe:RPE_0004 hypothetical protein; hypothetical protein complement(2278875..2280323) Desulfovibrio salexigens DSM 2638 8093264 YP_002991675.1 CDS Desal_2076 NC_012881.1 2280800 2282728 R KEGG: swp:swp_1383 hemolysin-type calcium-binding region; hypothetical protein complement(2280800..2282728) Desulfovibrio salexigens DSM 2638 8093265 YP_002991676.1 CDS Desal_2077 NC_012881.1 2283946 2285283 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mmw:Mmwyl1_2823 HlyD family type I secretion membrane fusion protein; HlyD family type I secretion membrane fusion protein complement(2283946..2285283) Desulfovibrio salexigens DSM 2638 8093266 YP_002991677.1 CDS Desal_2078 NC_012881.1 2285273 2286904 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbd:CBUD_2136 type I protein secretion ATP-binding protein; ABC transporter complement(2285273..2286904) Desulfovibrio salexigens DSM 2638 8093267 YP_002991678.1 CDS Desal_2079 NC_012881.1 2286928 2288490 R PFAM: ABC transporter transmembrane protein; KEGG: cbd:CBUD_2135 multidrug resistance ABC transporter ATP-binding and permease protein; ABC transporter permease complement(2286928..2288490) Desulfovibrio salexigens DSM 2638 8093268 YP_002991679.1 CDS Desal_2080 NC_012881.1 2288540 2290123 R KEGG: hypothetical protein; hypothetical protein complement(2288540..2290123) Desulfovibrio salexigens DSM 2638 8093269 YP_002991680.1 CDS Desal_2081 NC_012881.1 2290206 2290961 D KEGG: dde:Dde_2152 hypothetical protein; hypothetical protein 2290206..2290961 Desulfovibrio salexigens DSM 2638 8093270 YP_002991681.1 CDS Desal_2082 NC_012881.1 2290958 2292382 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_2153 transport protein TolQ-like; MotA/TolQ/ExbB proton channel 2290958..2292382 Desulfovibrio salexigens DSM 2638 8093271 YP_002991682.1 CDS Desal_2083 NC_012881.1 2292369 2292998 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_2154 biopolymer transport protein (ExbB)-like; MotA/TolQ/ExbB proton channel 2292369..2292998 Desulfovibrio salexigens DSM 2638 8093272 YP_002991683.1 CDS Desal_2084 NC_012881.1 2293003 2293413 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dde:Dde_2155 biopolymer transport protein (ExbD2); biopolymer transport protein ExbD/TolR 2293003..2293413 Desulfovibrio salexigens DSM 2638 8093273 YP_002991684.1 CDS Desal_2085 NC_012881.1 2293413 2294075 D TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: dde:Dde_2156 TonB-like; TonB family protein 2293413..2294075 Desulfovibrio salexigens DSM 2638 8093274 YP_002991685.1 CDS Desal_2086 NC_012881.1 2294072 2295235 D SMART: hypothetical protein; KEGG: dde:Dde_2157 TPR repeat-containing protein; hypothetical protein 2294072..2295235 Desulfovibrio salexigens DSM 2638 8093275 YP_002991686.1 CDS Desal_2087 NC_012881.1 2295473 2296465 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dds:Ddes_0430 transcriptional regulator, AraC family; AraC family transcriptional regulator 2295473..2296465 Desulfovibrio salexigens DSM 2638 8093276 YP_002991687.1 CDS Desal_2088 NC_012881.1 2296569 2297984 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; ATPase AAA; KEGG: glo:Glov_3527 two component, sigma54 specific, transcriptional regulator, Fis family; Fis family transcriptional regulator complement(2296569..2297984) Desulfovibrio salexigens DSM 2638 8093277 YP_002991688.1 CDS Desal_2089 NC_012881.1 2297977 2299866 R KEGG: gur:Gura_2172 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(2297977..2299866) Desulfovibrio salexigens DSM 2638 8093278 YP_002991689.1 CDS Desal_2090 NC_012881.1 2300325 2300726 D PFAM: protein of unknown function DUF336; KEGG: mxa:MXAN_2113 hypothetical protein; hypothetical protein 2300325..2300726 Desulfovibrio salexigens DSM 2638 8093279 YP_002991690.1 CDS Desal_2091 NC_012881.1 2300753 2303143 D KEGG: pca:Pcar_1397 glycerol dehydratase; TIGRFAM: pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase 2300753..2303143 Desulfovibrio salexigens DSM 2638 8093280 YP_002991691.1 CDS Desal_2092 NC_012881.1 2303265 2304227 D KEGG: pca:Pcar_1396 glycerol dehydratase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; glycyl-radical enzyme activating protein family 2303265..2304227 Desulfovibrio salexigens DSM 2638 8093281 YP_002991692.1 CDS Desal_2093 NC_012881.1 2304336 2306852 R KEGG: tgr:Tgr7_1864 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(2304336..2306852) Desulfovibrio salexigens DSM 2638 8093282 YP_002991693.1 CDS Desal_2094 NC_012881.1 2307134 2307547 R PFAM: DoxX family protein; KEGG: sfu:Sfum_3388 DoxX family protein; DoxX family protein complement(2307134..2307547) Desulfovibrio salexigens DSM 2638 8093283 YP_002991694.1 CDS Desal_2095 NC_012881.1 2307547 2308017 R PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: pca:Pcar_2523 rhodanese-related sulfurtransferase; rhodanese domain protein complement(2307547..2308017) Desulfovibrio salexigens DSM 2638 8093284 YP_002991695.1 CDS Desal_2096 NC_012881.1 2308491 2308892 D PFAM: cupin; KEGG: ppd:Ppro_1386 cupin 2 domain-containing protein; cupin 2308491..2308892 Desulfovibrio salexigens DSM 2638 8093286 YP_002991696.1 CDS Desal_2097 NC_012881.1 2309051 2309704 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: aha:AHA_1311 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2309051..2309704) Desulfovibrio salexigens DSM 2638 8093287 YP_002991697.1 CDS Desal_2098 NC_012881.1 2310141 2312126 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: dvl:Dvul_2947 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 2310141..2312126 Desulfovibrio salexigens DSM 2638 8093288 YP_002991698.1 CDS Desal_2099 NC_012881.1 2312193 2312744 R KEGG: dvm:DvMF_2966 hypothetical protein; hypothetical protein complement(2312193..2312744) Desulfovibrio salexigens DSM 2638 8093289 YP_002991699.1 CDS Desal_2100 NC_012881.1 2313283 2313456 D hypothetical protein 2313283..2313456 Desulfovibrio salexigens DSM 2638 8093290 YP_002991700.1 CDS Desal_2101 NC_012881.1 2313527 2314942 R hypothetical protein complement(2313527..2314942) Desulfovibrio salexigens DSM 2638 8093291 YP_002991701.1 CDS Desal_2102 NC_012881.1 2315338 2315607 R KEGG: pin:Ping_0239 hypothetical protein; hypothetical protein complement(2315338..2315607) Desulfovibrio salexigens DSM 2638 8093293 YP_002991702.1 CDS Desal_2103 NC_012881.1 2315792 2316352 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: dde:Dde_2000 transport-associated protein; transport-associated 2315792..2316352 Desulfovibrio salexigens DSM 2638 8093294 YP_002991703.1 CDS Desal_2104 NC_012881.1 2317024 2318349 D KEGG: MORN repeat variant family protein; hypothetical protein 2317024..2318349 Desulfovibrio salexigens DSM 2638 8093297 YP_002991704.1 CDS Desal_2105 NC_012881.1 2318411 2319514 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: glo:Glov_1080 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 2318411..2319514 Desulfovibrio salexigens DSM 2638 8093298 YP_002991705.1 CDS Desal_2106 NC_012881.1 2319530 2321188 R KEGG: shn:Shewana3_2489 hypothetical protein; hypothetical protein complement(2319530..2321188) Desulfovibrio salexigens DSM 2638 8093299 YP_002991706.1 CDS Desal_2107 NC_012881.1 2321675 2322475 D hypothetical protein 2321675..2322475 Desulfovibrio salexigens DSM 2638 8093300 YP_002991707.1 CDS Desal_2108 NC_012881.1 2322475 2322906 D KEGG: hypothetical protein; hypothetical protein 2322475..2322906 Desulfovibrio salexigens DSM 2638 8093301 YP_002991708.1 CDS Desal_2109 NC_012881.1 2322943 2323134 D hypothetical protein 2322943..2323134 Desulfovibrio salexigens DSM 2638 8093302 YP_002991709.1 CDS Desal_2110 NC_012881.1 2323337 2324281 D hypothetical protein 2323337..2324281 Desulfovibrio salexigens DSM 2638 8093303 YP_002991710.1 CDS Desal_2111 NC_012881.1 2324343 2325332 R PFAM: late control D family protein; KEGG: xfa:XF2479 hypothetical protein; late control D family protein complement(2324343..2325332) Desulfovibrio salexigens DSM 2638 8093304 YP_002991711.1 CDS Desal_2112 NC_012881.1 2325323 2325526 R PFAM: tail X family protein; KEGG: efe:EFER_2682 tail protein X; tail X family protein complement(2325323..2325526) Desulfovibrio salexigens DSM 2638 8093305 YP_002991712.1 CDS Desal_2113 NC_012881.1 2325523 2325903 R PFAM: P2 GpU family protein; KEGG: avn:Avin_37350 phage P2 GpU protein; P2 GpU family protein complement(2325523..2325903) Desulfovibrio salexigens DSM 2638 8093306 YP_002991713.1 CDS Desal_2114 NC_012881.1 2325915 2327927 R KEGG: sit:TM1040_1281 hypothetical protein; hypothetical protein complement(2325915..2327927) Desulfovibrio salexigens DSM 2638 8093307 YP_002991714.1 CDS Desal_2115 NC_012881.1 2328054 2328293 R KEGG: bgl:bglu_1g27130 hypothetical protein; hypothetical protein complement(2328054..2328293) Desulfovibrio salexigens DSM 2638 8093308 YP_002991715.1 CDS Desal_2116 NC_012881.1 2328297 2328806 R TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: sit:TM1040_1283 phage major tail tube protein; phage major tail tube protein complement(2328297..2328806) Desulfovibrio salexigens DSM 2638 8093309 YP_002991716.1 CDS Desal_2117 NC_012881.1 2328807 2329997 R PFAM: tail sheath protein; KEGG: sit:TM1040_1284 phage tail sheath protein; tail sheath protein complement(2328807..2329997) Desulfovibrio salexigens DSM 2638 8093310 YP_002991717.1 CDS Desal_2118 NC_012881.1 2330007 2330303 R hypothetical protein complement(2330007..2330303) Desulfovibrio salexigens DSM 2638 8093311 YP_002991718.1 CDS Desal_2119 NC_012881.1 2330307 2333096 R KEGG: geo:Geob_1583 hypothetical protein; hypothetical protein complement(2330307..2333096) Desulfovibrio salexigens DSM 2638 8093312 YP_002991719.1 CDS Desal_2120 NC_012881.1 2333098 2333790 R TIGRFAM: phage tail protein I; KEGG: ecm:EcSMS35_4340 phage tail protein GpI; phage tail protein I complement(2333098..2333790) Desulfovibrio salexigens DSM 2638 8093313 YP_002991720.1 CDS Desal_2121 NC_012881.1 2333790 2334668 R PFAM: Baseplate J family protein; KEGG: xfa:XF2488 phage-related baseplate assembly protein; baseplate J family protein complement(2333790..2334668) Desulfovibrio salexigens DSM 2638 8093314 YP_002991721.1 CDS Desal_2122 NC_012881.1 2334665 2335006 R PFAM: GPW/gp25 family protein; KEGG: wri:WRi_007090 baseplate assembly protein W; GPW/gp25 family protein complement(2334665..2335006) Desulfovibrio salexigens DSM 2638 8093315 YP_002991722.1 CDS Desal_2123 NC_012881.1 2335003 2335806 R TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: wri:WRi_012540 baseplate assembly protein V; phage baseplate assembly protein V complement(2335003..2335806) Desulfovibrio salexigens DSM 2638 8093316 YP_002991723.1 CDS Desal_2124 NC_012881.1 2335784 2336353 R KEGG: sit:TM1040_1295 hypothetical protein; hypothetical protein complement(2335784..2336353) Desulfovibrio salexigens DSM 2638 8093317 YP_002991724.1 CDS Desal_2125 NC_012881.1 2336335 2336853 R KEGG: xfn:XfasM23_1167 hypothetical protein; hypothetical protein complement(2336335..2336853) Desulfovibrio salexigens DSM 2638 8093318 YP_002991725.1 CDS Desal_2126 NC_012881.1 2336854 2337159 R hypothetical protein complement(2336854..2337159) Desulfovibrio salexigens DSM 2638 8093319 YP_002991726.1 CDS Desal_2127 NC_012881.1 2337156 2337416 R hypothetical protein complement(2337156..2337416) Desulfovibrio salexigens DSM 2638 8093320 YP_002991727.1 CDS Desal_2128 NC_012881.1 2337373 2337858 R hypothetical protein complement(2337373..2337858) Desulfovibrio salexigens DSM 2638 8093321 YP_002991728.1 CDS Desal_2129 NC_012881.1 2337855 2338295 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: dal:Dalk_3563 N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(2337855..2338295) Desulfovibrio salexigens DSM 2638 8093322 YP_002991729.1 CDS Desal_2131 NC_012881.1 2338754 2339077 R KEGG: efe:EFER_2692 hypothetical protein; hypothetical protein complement(2338754..2339077) Desulfovibrio salexigens DSM 2638 8093324 YP_002991730.1 CDS Desal_2132 NC_012881.1 2339090 2341192 R KEGG: pna:Pnap_0961 peptidase S14, ClpP; hypothetical protein complement(2339090..2341192) Desulfovibrio salexigens DSM 2638 8093325 YP_002991731.1 CDS Desal_2133 NC_012881.1 2341185 2342648 R TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: nmc:NMC0857 phage related protein; phage portal protein, lambda family complement(2341185..2342648) Desulfovibrio salexigens DSM 2638 8093326 YP_002991732.1 CDS Desal_2134 NC_012881.1 2342645 2342848 R hypothetical protein complement(2342645..2342848) Desulfovibrio salexigens DSM 2638 8093327 YP_002991733.1 CDS Desal_2135 NC_012881.1 2343007 2344281 D KEGG: cyclic nucleotide-binding domain containing protein; hypothetical protein 2343007..2344281 Desulfovibrio salexigens DSM 2638 8093328 YP_002991734.1 CDS Desal_2136 NC_012881.1 2344424 2344621 R hypothetical protein complement(2344424..2344621) Desulfovibrio salexigens DSM 2638 8093329 YP_002991735.1 CDS Desal_2137 NC_012881.1 2344783 2345022 R hypothetical protein complement(2344783..2345022) Desulfovibrio salexigens DSM 2638 8093330 YP_002991736.1 CDS Desal_2138 NC_012881.1 2345267 2346562 D KEGG: hypothetical protein; hypothetical protein 2345267..2346562 Desulfovibrio salexigens DSM 2638 8093331 YP_002991737.1 CDS Desal_2139 NC_012881.1 2346658 2347161 R hypothetical protein complement(2346658..2347161) Desulfovibrio salexigens DSM 2638 8093332 YP_002991738.1 CDS Desal_2140 NC_012881.1 2347204 2347857 R KEGG: bpa:BPP1254 hypothetical protein; hypothetical protein complement(2347204..2347857) Desulfovibrio salexigens DSM 2638 8094442 YP_002991739.1 CDS Desal_2141 NC_012881.1 2347968 2348489 R hypothetical protein complement(2347968..2348489) Desulfovibrio salexigens DSM 2638 8094443 YP_002991740.1 CDS Desal_2142 NC_012881.1 2348916 2349140 R hypothetical protein complement(2348916..2349140) Desulfovibrio salexigens DSM 2638 8094444 YP_002991741.1 CDS Desal_2143 NC_012881.1 2349142 2351103 R PFAM: terminase GpA; KEGG: dvu:DVU0194 terminase, large subunit; terminase GpA complement(2349142..2351103) Desulfovibrio salexigens DSM 2638 8094445 YP_002991742.1 CDS Desal_2144 NC_012881.1 2351093 2351650 R KEGG: dvu:DVU2186 hypothetical protein; hypothetical protein complement(2351093..2351650) Desulfovibrio salexigens DSM 2638 8094446 YP_002991743.1 CDS Desal_2145 NC_012881.1 2351752 2352186 R hypothetical protein complement(2351752..2352186) Desulfovibrio salexigens DSM 2638 8094447 YP_002991744.1 CDS Desal_2146 NC_012881.1 2352594 2354960 R TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: dvu:DVU2188 primase; P4 family phage/plasmid primase complement(2352594..2354960) Desulfovibrio salexigens DSM 2638 8094448 YP_002991745.1 CDS Desal_2147 NC_012881.1 2354963 2355430 R KEGG: vvu:VV1_0079 bacteriophage phi GP55-like protein; hypothetical protein complement(2354963..2355430) Desulfovibrio salexigens DSM 2638 8094449 YP_002991746.1 CDS Desal_2148 NC_012881.1 2355602 2355958 D hypothetical protein 2355602..2355958 Desulfovibrio salexigens DSM 2638 8094450 YP_002991747.1 CDS Desal_2149 NC_012881.1 2355963 2356280 R hypothetical protein complement(2355963..2356280) Desulfovibrio salexigens DSM 2638 8094451 YP_002991748.1 CDS Desal_2151 NC_012881.1 2356769 2357296 D SMART: helix-turn-helix domain protein; KEGG: dvu:DVU1519 transcriptional regulator; XRE family transcriptional regulator 2356769..2357296 Desulfovibrio salexigens DSM 2638 8094453 YP_002991749.1 CDS Desal_2152 NC_012881.1 2357387 2358085 D hypothetical protein 2357387..2358085 Desulfovibrio salexigens DSM 2638 8094454 YP_002991750.1 CDS Desal_2153 NC_012881.1 2358127 2359212 R PFAM: protein of unknown function DUF450; KEGG: dvu:DVU2837 hypothetical protein; hypothetical protein complement(2358127..2359212) Desulfovibrio salexigens DSM 2638 8094455 YP_002991751.1 CDS Desal_2154 NC_012881.1 2359439 2359930 D hypothetical protein 2359439..2359930 Desulfovibrio salexigens DSM 2638 8094456 YP_002991752.1 CDS Desal_2155 NC_012881.1 2360195 2360620 D hypothetical protein 2360195..2360620 Desulfovibrio salexigens DSM 2638 8094457 YP_002991753.1 CDS Desal_2156 NC_012881.1 2360598 2361506 D PFAM: integrase family protein; KEGG: sat:SYN_00484 integrase; integrase family protein 2360598..2361506 Desulfovibrio salexigens DSM 2638 8094458 YP_002991754.1 CDS Desal_2157 NC_012881.1 2362109 2363026 R TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: dvl:Dvul_0072 dihydroorotate dehydrogenase family protein; dihydroorotate dehydrogenase family protein complement(2362109..2363026) Desulfovibrio salexigens DSM 2638 8094460 YP_002991755.1 CDS Desal_2158 NC_012881.1 2363030 2363824 R PFAM: oxidoreductase; KEGG: dde:Dde_0057 dihydroorotate oxidase B, electron transfer subunit; oxidoreductase complement(2363030..2363824) Desulfovibrio salexigens DSM 2638 8094461 YP_002991756.1 CDS Desal_2159 NC_012881.1 2363881 2365857 D PFAM: peptidase U32; KEGG: dvm:DvMF_2141 peptidase U32; peptidase U32 2363881..2365857 Desulfovibrio salexigens DSM 2638 8094462 YP_002991757.1 CDS Desal_2160 NC_012881.1 2365916 2366800 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: met:M446_3008 XRE family transcriptional regulator; XRE family transcriptional regulator complement(2365916..2366800) Desulfovibrio salexigens DSM 2638 8094463 YP_002991758.1 CDS Desal_2161 NC_012881.1 2367173 2368192 D TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dat:HRM2_38830 DctP8; TRAP dicarboxylate transporter subunit DctP 2367173..2368192 Desulfovibrio salexigens DSM 2638 8094464 YP_002991759.1 CDS Desal_2162 NC_012881.1 2368319 2368837 D PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mmw:Mmwyl1_2292 tripartite ATP-independent periplasmic transporter DctQ; tripartite ATP-independent periplasmic transporter DctQ component 2368319..2368837 Desulfovibrio salexigens DSM 2638 8094465 YP_002991760.1 CDS Desal_2163 NC_012881.1 2368858 2370135 D TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dat:HRM2_38840 DctM8; TRAP dicarboxylate transporter subunit DctM 2368858..2370135 Desulfovibrio salexigens DSM 2638 8094466 YP_002991761.1 CDS Desal_2164 NC_012881.1 2370150 2371484 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2370150..2371484 Desulfovibrio salexigens DSM 2638 8094467 YP_002991762.1 CDS Desal_2165 NC_012881.1 2371481 2372524 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2371481..2372524 Desulfovibrio salexigens DSM 2638 8094468 YP_002991763.1 CDS pyrE NC_012881.1 2372592 2373287 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 2372592..2373287 Desulfovibrio salexigens DSM 2638 8094469 YP_002991764.1 CDS Desal_2167 NC_012881.1 2373335 2375506 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_3298 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2373335..2375506) Desulfovibrio salexigens DSM 2638 8094470 YP_002991765.1 CDS Desal_2168 NC_012881.1 2375687 2378098 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: dde:Dde_3124 penicillin-binding protein 1A; penicillin-binding protein complement(2375687..2378098) Desulfovibrio salexigens DSM 2638 8094471 YP_002991766.1 CDS Desal_2169 NC_012881.1 2378111 2378641 R KEGG: dvm:DvMF_2631 hypothetical protein; hypothetical protein complement(2378111..2378641) Desulfovibrio salexigens DSM 2638 8094472 YP_002991767.1 CDS Desal_2170 NC_012881.1 2378666 2380153 R TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: dvl:Dvul_2807 amidophosphoribosyltransferase; amidophosphoribosyltransferase complement(2378666..2380153) Desulfovibrio salexigens DSM 2638 8094473 YP_002991768.1 CDS Desal_2171 NC_012881.1 2380221 2383454 R TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; RimK domain protein ATP-grasp; MGS domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; KEGG: dde:Dde_0333 carbamoyl-phosphate synthase large subunit; carbamoyl-phosphate synthase large subunit complement(2380221..2383454) Desulfovibrio salexigens DSM 2638 8094474 YP_002991769.1 CDS Desal_2172 NC_012881.1 2383626 2383898 D PFAM: FeoA family protein; KEGG: dat:HRM2_10920 Fur; FeoA family protein 2383626..2383898 Desulfovibrio salexigens DSM 2638 8094475 YP_002991770.1 CDS Desal_2173 NC_012881.1 2383943 2384209 D hypothetical protein 2383943..2384209 Desulfovibrio salexigens DSM 2638 8094476 YP_002991771.1 CDS Desal_2174 NC_012881.1 2384265 2384498 D PFAM: SlyX family protein; KEGG: tau:Tola_2133 SlyX family protein; SlyX family protein 2384265..2384498 Desulfovibrio salexigens DSM 2638 8094477 YP_002991772.1 CDS Desal_2175 NC_012881.1 2384549 2385484 D KEGG: lip:LI0272 hypothetical protein; hypothetical protein 2384549..2385484 Desulfovibrio salexigens DSM 2638 8094478 YP_002991773.1 CDS Desal_2176 NC_012881.1 2385572 2387512 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(2385572..2387512) Desulfovibrio salexigens DSM 2638 8094479 YP_002991774.1 CDS Desal_2177 NC_012881.1 2387735 2389036 R PFAM: PSP1 domain protein; KEGG: dvm:DvMF_0760 PSP1 domain protein; PSP1 domain-containing protein complement(2387735..2389036) Desulfovibrio salexigens DSM 2638 8094480 YP_002991775.1 CDS Desal_2178 NC_012881.1 2389280 2389678 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dde:Dde_1694 response regulator receiver domain-containing protein; response regulator receiver protein complement(2389280..2389678) Desulfovibrio salexigens DSM 2638 8094481 YP_002991776.1 CDS Desal_2179 NC_012881.1 2389803 2392208 R TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: dde:Dde_0547 ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 complement(2389803..2392208) Desulfovibrio salexigens DSM 2638 8094482 YP_002991777.1 CDS Desal_2180 NC_012881.1 2392224 2393477 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2392224..2393477) Desulfovibrio salexigens DSM 2638 8094483 YP_002991778.1 CDS Desal_2181 NC_012881.1 2394259 2395983 D TIGRFAM: sulfate transporter; PFAM: sulfate transporter; Sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: dvl:Dvul_2701 sulfate transporter; sulfate transporter 2394259..2395983 Desulfovibrio salexigens DSM 2638 8094486 YP_002991779.1 CDS Desal_2182 NC_012881.1 2396026 2396562 R KEGG: sme:SMc00938 hypothetical protein; hypothetical protein complement(2396026..2396562) Desulfovibrio salexigens DSM 2638 8094487 YP_002991780.1 CDS Desal_2183 NC_012881.1 2396764 2397000 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: dvl:Dvul_2607 CopG family transcriptional regulator; CopG family transcriptional regulator 2396764..2397000 Desulfovibrio salexigens DSM 2638 8094488 YP_002991781.1 CDS Desal_2184 NC_012881.1 2397000 2397275 D PFAM: plasmid stabilization system; KEGG: eca:ECA2758 hypothetical protein; plasmid stabilization system 2397000..2397275 Desulfovibrio salexigens DSM 2638 8094489 YP_002991782.1 CDS Desal_2185 NC_012881.1 2397315 2399222 R TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 3; Elongation factor SelB winged helix 2; elongation factor Tu domain 2 protein; KEGG: dvl:Dvul_2441 selenocysteine-specific translation elongation factor; selenocysteine-specific translation elongation factor complement(2397315..2399222) Desulfovibrio salexigens DSM 2638 8094490 YP_002991783.1 CDS Desal_2186 NC_012881.1 2399415 2400803 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 1 complement(2399415..2400803) Desulfovibrio salexigens DSM 2638 8094491 YP_002991784.1 CDS Desal_2187 NC_012881.1 2400905 2402302 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(2400905..2402302) Desulfovibrio salexigens DSM 2638 8094492 YP_002991785.1 CDS Desal_2188 NC_012881.1 2402433 2403716 R KEGG: dvm:DvMF_1310 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(2402433..2403716) Desulfovibrio salexigens DSM 2638 8094493 YP_002991786.1 CDS Desal_2189 NC_012881.1 2404064 2405398 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: sfu:Sfum_2442 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator complement(2404064..2405398) Desulfovibrio salexigens DSM 2638 8094495 YP_002991787.1 CDS Desal_2190 NC_012881.1 2405414 2406910 R KEGG: sfu:Sfum_2443 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(2405414..2406910) Desulfovibrio salexigens DSM 2638 8094496 YP_002991788.1 CDS Desal_2191 NC_012881.1 2407032 2407721 R KEGG: dol:Dole_1354 hypothetical protein; hypothetical protein complement(2407032..2407721) Desulfovibrio salexigens DSM 2638 8094497 YP_002991789.1 CDS Desal_2192 NC_012881.1 2407723 2409003 R PFAM: protein of unknown function DUF81; KEGG: dat:HRM2_38150 hypothetical protein; hypothetical protein complement(2407723..2409003) Desulfovibrio salexigens DSM 2638 8094498 YP_002991790.1 CDS Desal_2193 NC_012881.1 2409076 2409447 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvl:Dvul_0173 response regulator receiver protein; response regulator receiver protein complement(2409076..2409447) Desulfovibrio salexigens DSM 2638 8094499 YP_002991791.1 CDS Desal_2194 NC_012881.1 2409434 2409835 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dal:Dalk_2251 response regulator receiver protein; response regulator receiver protein complement(2409434..2409835) Desulfovibrio salexigens DSM 2638 8094500 YP_002991792.1 CDS Desal_2195 NC_012881.1 2409854 2410285 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dal:Dalk_2250 response regulator receiver protein; response regulator receiver protein complement(2409854..2410285) Desulfovibrio salexigens DSM 2638 8094501 YP_002991793.1 CDS Desal_2196 NC_012881.1 2410254 2412008 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dol:Dole_1356 histidine kinase; histidine kinase complement(2410254..2412008) Desulfovibrio salexigens DSM 2638 8094502 YP_002991794.1 CDS Desal_2197 NC_012881.1 2412578 2412964 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dol:Dole_1357 response regulator receiver protein; response regulator receiver protein 2412578..2412964 Desulfovibrio salexigens DSM 2638 8094503 YP_002991795.1 CDS Desal_2198 NC_012881.1 2412985 2415585 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: sfu:Sfum_0649 pyruvate, water dikinase; pyruvate water dikinase complement(2412985..2415585) Desulfovibrio salexigens DSM 2638 8094504 YP_002991796.1 CDS Desal_2199 NC_012881.1 2415598 2415699 R hypothetical protein complement(2415598..2415699) Desulfovibrio salexigens DSM 2638 8094505 YP_002991797.1 CDS Desal_2200 NC_012881.1 2416027 2416674 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: pat:Patl_0274 redoxin; alkyl hydroperoxide reductase 2416027..2416674 Desulfovibrio salexigens DSM 2638 8094506 YP_002991798.1 CDS Desal_2201 NC_012881.1 2416868 2417944 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: dde:Dde_2791 arsenical-resistance protein; arsenical-resistance protein complement(2416868..2417944) Desulfovibrio salexigens DSM 2638 8094507 YP_002991799.1 CDS Desal_2202 NC_012881.1 2418204 2418548 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gur:Gura_0468 regulatory protein, ArsR; ArsR family transcriptional regulator complement(2418204..2418548) Desulfovibrio salexigens DSM 2638 8094508 YP_002991800.1 CDS Desal_2203 NC_012881.1 2418619 2419317 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: dde:Dde_2782 hypothetical protein; cytochrome c biogenesis protein transmembrane region complement(2418619..2419317) Desulfovibrio salexigens DSM 2638 8094509 YP_002991801.1 CDS Desal_2204 NC_012881.1 2419322 2419747 R PFAM: Thioredoxin domain; KEGG: dol:Dole_2886 thioredoxin domain-containing protein; thioredoxin complement(2419322..2419747) Desulfovibrio salexigens DSM 2638 8094510 YP_002991802.1 CDS Desal_2205 NC_012881.1 2419767 2419997 R TIGRFAM: redox-active disulfide protein 2; PFAM: glutaredoxin 2; KEGG: dde:Dde_2778 redox-active disulfide protein 2; redox-active disulfide protein 2 complement(2419767..2419997) Desulfovibrio salexigens DSM 2638 8094511 YP_002991803.1 CDS Desal_2208 NC_012881.1 2421279 2422175 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 2421279..2422175 Desulfovibrio salexigens DSM 2638 8094513 YP_002991804.1 CDS Desal_2209 NC_012881.1 2422691 2423773 D KEGG: rec:RHECIAT_CH0003757 hypothetical protein; hypothetical protein 2422691..2423773 Desulfovibrio salexigens DSM 2638 8094514 YP_002991805.1 CDS Desal_2210 NC_012881.1 2423803 2425344 D PFAM: outer membrane efflux protein; KEGG: bac:BamMC406_6073 TolC family type I secretion outer membrane protein; outer membrane efflux protein 2423803..2425344 Desulfovibrio salexigens DSM 2638 8094515 YP_002991806.1 CDS Desal_2211 NC_012881.1 2425347 2433287 D KEGG: rso:RS05070 hemagglutinin/hemolysin-related protein; hypothetical protein 2425347..2433287 Desulfovibrio salexigens DSM 2638 8094516 YP_002991807.1 CDS Desal_2212 NC_012881.1 2433322 2434269 D KEGG: maq:Maqu_0322 OmpA/MotB domain-containing protein; hypothetical protein 2433322..2434269 Desulfovibrio salexigens DSM 2638 8094517 YP_002991808.1 CDS Desal_2213 NC_012881.1 2434281 2436533 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: lpc:LPC_0935 toxin secretion ATP binding protein; ABC transporter 2434281..2436533 Desulfovibrio salexigens DSM 2638 8094518 YP_002991809.1 CDS Desal_2214 NC_012881.1 2436536 2437828 D PFAM: secretion protein HlyD family protein; KEGG: cco:CCC13826_0892 acriflavine resistance protein; secretion protein HlyD family protein 2436536..2437828 Desulfovibrio salexigens DSM 2638 8094519 YP_002991810.1 CDS Desal_2215 NC_012881.1 2437865 2439865 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; metal-dependent phosphohydrolase HD sub domain; KEGG: dde:Dde_1421 PAS/PAC sensor protein; PAS/PAC sensor protein 2437865..2439865 Desulfovibrio salexigens DSM 2638 8094520 YP_002991811.1 CDS Desal_2216 NC_012881.1 2440028 2441728 D KEGG: dat:HRM2_03280 hypothetical protein (transmembrane family protein); hypothetical protein 2440028..2441728 Desulfovibrio salexigens DSM 2638 8094521 YP_002991812.1 CDS Desal_2217 NC_012881.1 2441769 2442650 R PFAM: MscS Mechanosensitive ion channel; KEGG: tgr:Tgr7_1533 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS complement(2441769..2442650) Desulfovibrio salexigens DSM 2638 8094522 YP_002991813.1 CDS Desal_2218 NC_012881.1 2442850 2443641 D PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: dde:Dde_0161 LytR/AlgR family transcriptional regulator; LytR family transcriptional regulator 2442850..2443641 Desulfovibrio salexigens DSM 2638 8092474 YP_002991814.1 CDS Desal_2219 NC_012881.1 2443751 2445487 D PFAM: histidine kinase internal region; GAF domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; KEGG: dde:Dde_0160 ATP-binding region, ATPase-like; signal transduction histidine kinase LytS 2443751..2445487 Desulfovibrio salexigens DSM 2638 8092475 YP_002991815.1 CDS Desal_2220 NC_012881.1 2445557 2445985 D hypothetical protein 2445557..2445985 Desulfovibrio salexigens DSM 2638 8090740 YP_002991816.1 CDS Desal_2221 NC_012881.1 2445987 2446349 D hypothetical protein 2445987..2446349 Desulfovibrio salexigens DSM 2638 8091287 YP_002991817.1 CDS Desal_2222 NC_012881.1 2446492 2447058 D PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: dat:HRM2_38400 NADPH-dependent FMN reductase, iron-sulfur flavoprotein; NADPH-dependent FMN reductase 2446492..2447058 Desulfovibrio salexigens DSM 2638 8092312 YP_002991818.1 CDS Desal_2223 NC_012881.1 2447151 2447816 R PFAM: filamentation induced by cAMP protein Fic; KEGG: maq:Maqu_2657 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic complement(2447151..2447816) Desulfovibrio salexigens DSM 2638 8092313 YP_002991819.1 CDS Desal_2224 NC_012881.1 2448090 2449508 D PFAM: carbon starvation protein CstA; KEGG: dps:DP1277 carbon starvation protein A; carbon starvation protein CstA 2448090..2449508 Desulfovibrio salexigens DSM 2638 8092314 YP_002991820.1 CDS Desal_2225 NC_012881.1 2449604 2450056 R KEGG: met:M446_1150 hypothetical protein; hypothetical protein complement(2449604..2450056) Desulfovibrio salexigens DSM 2638 8092315 YP_002991821.1 CDS Desal_2226 NC_012881.1 2450059 2450313 R KEGG: mpo:Mpop_4431 hypothetical protein; hypothetical protein complement(2450059..2450313) Desulfovibrio salexigens DSM 2638 8092316 YP_002991822.1 CDS Desal_2227 NC_012881.1 2450404 2451525 R PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: glo:Glov_1080 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 complement(2450404..2451525) Desulfovibrio salexigens DSM 2638 8092317 YP_002991823.1 CDS Desal_2228 NC_012881.1 2451530 2452441 R hypothetical protein complement(2451530..2452441) Desulfovibrio salexigens DSM 2638 8092318 YP_002991824.1 CDS Desal_2229 NC_012881.1 2452456 2453289 R KEGG: sat:SYN_02895 TPR repeat-containing protein; hypothetical protein complement(2452456..2453289) Desulfovibrio salexigens DSM 2638 8092319 YP_002991825.1 CDS Desal_2230 NC_012881.1 2453393 2454253 R PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: pca:Pcar_2997 F0F1-type ATP synthase, gamma subunit; H+transporting two-sector ATPase subunit gamma complement(2453393..2454253) Desulfovibrio salexigens DSM 2638 8092320 YP_002991826.1 CDS Desal_2231 NC_012881.1 2454240 2455766 R KEGG: pca:Pcar_2996 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha complement(2454240..2455766) Desulfovibrio salexigens DSM 2638 8092321 YP_002991827.1 CDS Desal_2232 NC_012881.1 2455881 2456612 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: pna:Pnap_2330 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(2455881..2456612) Desulfovibrio salexigens DSM 2638 8092322 YP_002991828.1 CDS Desal_2233 NC_012881.1 2456615 2456893 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(2456615..2456893) Desulfovibrio salexigens DSM 2638 8092323 YP_002991829.1 CDS Desal_2234 NC_012881.1 2456914 2457582 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(2456914..2457582) Desulfovibrio salexigens DSM 2638 8092324 YP_002991830.1 CDS Desal_2235 NC_012881.1 2457573 2457890 R KEGG: pca:Pcar_2992 hypothetical protein; hypothetical protein complement(2457573..2457890) Desulfovibrio salexigens DSM 2638 8092325 YP_002991831.1 CDS Desal_2236 NC_012881.1 2457877 2458248 R TIGRFAM: F0F1-ATPase subunit; KEGG: pna:Pnap_2334 F0F1-ATPase subunit; F0F1-ATPase subunit complement(2457877..2458248) Desulfovibrio salexigens DSM 2638 8092326 YP_002991832.1 CDS Desal_2237 NC_012881.1 2458245 2458625 R TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: pca:Pcar_2990 F0F1 ATP synthase subunit epsilon; ATP synthase F1 subunit epsilon complement(2458245..2458625) Desulfovibrio salexigens DSM 2638 8092327 YP_002991833.1 CDS Desal_2238 NC_012881.1 2458622 2459995 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(2458622..2459995) Desulfovibrio salexigens DSM 2638 8092328 YP_002991834.1 CDS Desal_2239 NC_012881.1 2460217 2460996 D KEGG: dal:Dalk_1894 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 2460217..2460996 Desulfovibrio salexigens DSM 2638 8092329 YP_002991835.1 CDS Desal_2240 NC_012881.1 2461003 2463225 D KEGG: dde:Dde_2446 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ 2461003..2463225 Desulfovibrio salexigens DSM 2638 8092330 YP_002991836.1 CDS Desal_2241 NC_012881.1 2463331 2464080 D KEGG: dde:Dde_2584 hypothetical protein; hypothetical protein 2463331..2464080 Desulfovibrio salexigens DSM 2638 8092331 YP_002991837.1 CDS Desal_2242 NC_012881.1 2464138 2465478 R KEGG: hch:HCH_00651 Rossmann fold nucleotide-binding protein; Rossmann fold nucleotide-binding protein complement(2464138..2465478) Desulfovibrio salexigens DSM 2638 8092332 YP_002991838.1 CDS Desal_2243 NC_012881.1 2465637 2465741 R hypothetical protein complement(2465637..2465741) Desulfovibrio salexigens DSM 2638 8092333 YP_002991839.1 CDS Desal_2244 NC_012881.1 2465948 2466724 D PFAM: cyclase family protein; KEGG: ara:Arad_8216 cyclase; cyclase family protein 2465948..2466724 Desulfovibrio salexigens DSM 2638 8092334 YP_002991840.1 CDS Desal_2245 NC_012881.1 2473214 2474218 R KEGG: dps:DP0690 hypothetical protein; hypothetical protein complement(2473214..2474218) Desulfovibrio salexigens DSM 2638 8092340 YP_002991841.1 CDS Desal_2246 NC_012881.1 2474305 2474655 R KEGG: rso:RSc2731 aspartate alpha-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase complement(2474305..2474655) Desulfovibrio salexigens DSM 2638 8092341 YP_002991842.1 CDS Desal_2247 NC_012881.1 2474945 2475172 R PFAM: thiamineS protein; KEGG: dal:Dalk_1984 thiamineS protein; sulfur carrier protein ThiS complement(2474945..2475172) Desulfovibrio salexigens DSM 2638 8092342 YP_002991843.1 CDS Desal_2248 NC_012881.1 2475329 2476249 R PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; KEGG: dde:Dde_1778 manganese-dependent inorganic pyrophosphatase; inorganic diphosphatase complement(2475329..2476249) Desulfovibrio salexigens DSM 2638 8092343 YP_002991844.1 CDS Desal_2249 NC_012881.1 2476325 2476918 R KEGG: dvl:Dvul_1499 hypothetical protein; hypothetical protein complement(2476325..2476918) Desulfovibrio salexigens DSM 2638 8092344 YP_002991845.1 CDS Desal_2250 NC_012881.1 2477037 2477498 R PFAM: PTS system sorbose subfamily IIB component; KEGG: dde:Dde_1776 PTS system, IIB component; PTS system sorbose subfamily transporter subunit IIB complement(2477037..2477498) Desulfovibrio salexigens DSM 2638 8092345 YP_002991846.1 CDS Desal_2251 NC_012881.1 2477501 2477929 R PFAM: PTS system fructose subfamily IIA component; KEGG: dvl:Dvul_1501 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA complement(2477501..2477929) Desulfovibrio salexigens DSM 2638 8092346 YP_002991847.1 CDS Desal_2252 NC_012881.1 2477958 2478839 R PFAM: hypothetical protein; KEGG: dvm:DvMF_0424 hypothetical protein; hypothetical protein complement(2477958..2478839) Desulfovibrio salexigens DSM 2638 8092347 YP_002991848.1 CDS Desal_2253 NC_012881.1 2478934 2479383 R TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: dde:Dde_1773 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(2478934..2479383) Desulfovibrio salexigens DSM 2638 8092348 YP_002991849.1 CDS Desal_2254 NC_012881.1 2479387 2479923 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: dde:Dde_1772 SSU ribosomal protein S30P / sigma 54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA complement(2479387..2479923) Desulfovibrio salexigens DSM 2638 8092349 YP_002991850.1 CDS Desal_2255 NC_012881.1 2479975 2481390 R TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: dvl:Dvul_1505 RNA polymerase, sigma 54 subunit, RpoN; RNA polymerase sigma 54 subunit RpoN complement(2479975..2481390) Desulfovibrio salexigens DSM 2638 8092350 YP_002991851.1 CDS Desal_2256 NC_012881.1 2481713 2482435 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_1770 ATPase; ABC transporter complement(2481713..2482435) Desulfovibrio salexigens DSM 2638 8092351 YP_002991852.1 CDS Desal_2257 NC_012881.1 2482453 2484078 R TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; SH3 type 3 domain protein; KEGG: dvl:Dvul_1507 OstA family protein; lipopolysaccharide transport periplasmic protein LptA complement(2482453..2484078) Desulfovibrio salexigens DSM 2638 8092352 YP_002991853.1 CDS Desal_2258 NC_012881.1 2484093 2484683 R PFAM: protein of unknown function DUF1239; KEGG: dvu:DVU1626 hypothetical protein; hypothetical protein complement(2484093..2484683) Desulfovibrio salexigens DSM 2638 8092353 YP_002991854.1 CDS Desal_2259 NC_012881.1 2484684 2485205 R TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: dde:Dde_1767 phosphatase KdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(2484684..2485205) Desulfovibrio salexigens DSM 2638 8092354 YP_002991855.1 CDS Desal_2260 NC_012881.1 2485195 2486007 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2485195..2486007) Desulfovibrio salexigens DSM 2638 8092355 YP_002991856.1 CDS pyrG NC_012881.1 2486084 2487721 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2486084..2487721) Desulfovibrio salexigens DSM 2638 8092356 YP_002991857.1 CDS Desal_2262 NC_012881.1 2488011 2488820 D KEGG: dde:Dde_1764 phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase 2488011..2488820 Desulfovibrio salexigens DSM 2638 8092357 YP_002991858.1 CDS Desal_2263 NC_012881.1 2488859 2489368 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dvm:DvMF_0169 CMP/dCMP deaminase zinc-binding; zinc-binding CMP/dCMP deaminase 2488859..2489368 Desulfovibrio salexigens DSM 2638 8092358 YP_002991859.1 CDS Desal_2264 NC_012881.1 2489831 2489980 D hypothetical protein 2489831..2489980 Desulfovibrio salexigens DSM 2638 8092359 YP_002991860.1 CDS Desal_2265 NC_012881.1 2490053 2490511 R KEGG: predicted gene, 621884; hypothetical protein complement(2490053..2490511) Desulfovibrio salexigens DSM 2638 8092360 YP_002991861.1 CDS Desal_2266 NC_012881.1 2490583 2491818 R PFAM: phosphatidylserine decarboxylase-related; KEGG: sun:SUN_0887 hypothetical protein; phosphatidylserine decarboxylase complement(2490583..2491818) Desulfovibrio salexigens DSM 2638 8092361 YP_002991862.1 CDS Desal_2267 NC_012881.1 2492952 2494301 D PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dal:Dalk_3293 type III restriction protein res subunit; type III restriction protein res subunit 2492952..2494301 Desulfovibrio salexigens DSM 2638 8092363 YP_002991863.1 CDS Desal_2268 NC_012881.1 2494359 2494529 R hypothetical protein complement(2494359..2494529) Desulfovibrio salexigens DSM 2638 8092364 YP_002991864.1 CDS Desal_2269 NC_012881.1 2494751 2495329 D hypothetical protein 2494751..2495329 Desulfovibrio salexigens DSM 2638 8092365 YP_002991865.1 CDS Desal_2270 NC_012881.1 2495348 2496256 R PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pha:PSHAa0573 transcriptional regulator; AraC family transcriptional regulator complement(2495348..2496256) Desulfovibrio salexigens DSM 2638 8092366 YP_002991866.1 CDS Desal_2271 NC_012881.1 2496437 2497609 D PFAM: iron-containing alcohol dehydrogenase; KEGG: dps:DP1868 NADH-dependent alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2496437..2497609 Desulfovibrio salexigens DSM 2638 8092367 YP_002991867.1 CDS Desal_2272 NC_012881.1 2497669 2499363 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: rhodanese domain protein; KEGG: ppd:Ppro_1974 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2497669..2499363) Desulfovibrio salexigens DSM 2638 8092368 YP_002991868.1 CDS Desal_2273 NC_012881.1 2499639 2500370 D KEGG: dal:Dalk_0127 PAS/PAC sensor protein; PAS/PAC sensor protein 2499639..2500370 Desulfovibrio salexigens DSM 2638 8092369 YP_002991869.1 CDS Desal_2274 NC_012881.1 2500438 2500821 R PFAM: ferredoxin thioredoxin reductase beta chain; KEGG: ferredoxin thioredoxin reductase catalytic beta chain family protein; ferredoxin thioredoxin reductase subunit beta complement(2500438..2500821) Desulfovibrio salexigens DSM 2638 8092370 YP_002991870.1 CDS Desal_2275 NC_012881.1 2500980 2501681 R PFAM: haloacid dehalogenase; KEGG: dat:HRM2_46780 haloacid dehalogenase-like family protein; haloacid dehalogenase complement(2500980..2501681) Desulfovibrio salexigens DSM 2638 8092371 YP_002991871.1 CDS Desal_2276 NC_012881.1 2501800 2502723 R PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dde:Dde_3472 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2501800..2502723) Desulfovibrio salexigens DSM 2638 8092372 YP_002991872.1 CDS Desal_2277 NC_012881.1 2502914 2503594 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pca:Pcar_0165 hypothetical protein; 4Fe-4S ferredoxin complement(2502914..2503594) Desulfovibrio salexigens DSM 2638 8092373 YP_002991873.1 CDS Desal_2278 NC_012881.1 2503667 2504557 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator complement(2503667..2504557) Desulfovibrio salexigens DSM 2638 8092374 YP_002991874.1 CDS Desal_2279 NC_012881.1 2504743 2505606 D KEGG: psb:Psyr_1296 hypothetical protein; hypothetical protein 2504743..2505606 Desulfovibrio salexigens DSM 2638 8092375 YP_002991875.1 CDS Desal_2280 NC_012881.1 2505674 2506051 D PFAM: protein of unknown function DUF1696; KEGG: swd:Swoo_0950 hypothetical protein; hypothetical protein 2505674..2506051 Desulfovibrio salexigens DSM 2638 8092376 YP_002991876.1 CDS Desal_2281 NC_012881.1 2506204 2508042 D PFAM: carboxylyase-related protein; KEGG: dvu:DVU2320 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein; carboxylyase-related protein 2506204..2508042 Desulfovibrio salexigens DSM 2638 8092377 YP_002991877.1 CDS Desal_2282 NC_012881.1 2508094 2508879 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: cvi:CV_1638 amino acid ABC transporter; family 3 extracellular solute-binding protein complement(2508094..2508879) Desulfovibrio salexigens DSM 2638 8092378 YP_002991878.1 CDS Desal_2283 NC_012881.1 2509099 2510367 D KEGG: ade:Adeh_3546 hypothetical protein; hypothetical protein 2509099..2510367 Desulfovibrio salexigens DSM 2638 8092379 YP_002991879.1 CDS Desal_2284 NC_012881.1 2510414 2510911 R hypothetical protein complement(2510414..2510911) Desulfovibrio salexigens DSM 2638 8092380 YP_002991880.1 CDS Desal_2285 NC_012881.1 2511066 2511665 D PFAM: ThiJ/PfpI domain protein; KEGG: afr:AFE_0523 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; ThiJ/PfpI domain-containing protein 2511066..2511665 Desulfovibrio salexigens DSM 2638 8092381 YP_002991881.1 CDS Desal_2286 NC_012881.1 2511748 2512323 R PFAM: calcium-binding EF-hand-containing protein; KEGG: dps:DP1789 hypothetical protein; calcium-binding EF-hand-containing protein complement(2511748..2512323) Desulfovibrio salexigens DSM 2638 8092382 YP_002991882.1 CDS Desal_2287 NC_012881.1 2512475 2513206 R PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; KEGG: dat:HRM2_23010 GlnQ5; ABC transporter complement(2512475..2513206) Desulfovibrio salexigens DSM 2638 8092383 YP_002991883.1 CDS Desal_2288 NC_012881.1 2513211 2513879 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_23000 GlnP6; polar amino acid ABC transporter permease complement(2513211..2513879) Desulfovibrio salexigens DSM 2638 8092384 YP_002991884.1 CDS Desal_2289 NC_012881.1 2513958 2514701 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: dat:HRM2_22990 GlnH3; family 3 extracellular solute-binding protein complement(2513958..2514701) Desulfovibrio salexigens DSM 2638 8092385 YP_002991885.1 CDS Desal_2290 NC_012881.1 2515534 2517720 D PFAM: glutamine synthetase catalytic region; KEGG: dde:Dde_0102 glutamine synthetase, type III; glutamine synthetase 2515534..2517720 Desulfovibrio salexigens DSM 2638 8092386 YP_002991886.1 CDS Desal_2291 NC_012881.1 2517870 2518412 D KEGG: hch:HCH_04531 hypothetical protein; hypothetical protein 2517870..2518412 Desulfovibrio salexigens DSM 2638 8092387 YP_002991887.1 CDS Desal_2292 NC_012881.1 2518683 2520221 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: dde:Dde_2857 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2518683..2520221 Desulfovibrio salexigens DSM 2638 8092388 YP_002991888.1 CDS Desal_2293 NC_012881.1 2520275 2520502 R PFAM: protein of unknown function DUF903; KEGG: pmy:Pmen_1742 hypothetical protein; hypothetical protein complement(2520275..2520502) Desulfovibrio salexigens DSM 2638 8092389 YP_002991889.1 CDS Desal_2294 NC_012881.1 2520571 2522223 R PFAM: glycosyl transferase family 2; KEGG: dde:Dde_1487 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase complement(2520571..2522223) Desulfovibrio salexigens DSM 2638 8092390 YP_002991890.1 CDS Desal_2295 NC_012881.1 2522234 2523925 R KEGG: dde:Dde_1715 CgeB family protein; CgeB family protein complement(2522234..2523925) Desulfovibrio salexigens DSM 2638 8092096 YP_002991891.1 CDS Desal_2296 NC_012881.1 2524058 2524750 D PFAM: chloramphenicol acetyltransferase; KEGG: dvl:Dvul_1087 chloramphenicol acetyltransferase; chloramphenicol acetyltransferase 2524058..2524750 Desulfovibrio salexigens DSM 2638 8094131 YP_002991892.1 CDS Desal_2297 NC_012881.1 2524864 2525124 R PFAM: excinuclease ABC C subunit domain protein; KEGG: dvm:DvMF_2126 excinuclease ABC C subunit domain protein; excinuclease ABC subunit C complement(2524864..2525124) Desulfovibrio salexigens DSM 2638 8094132 YP_002991893.1 CDS Desal_2298 NC_012881.1 2525368 2527362 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvu:DVU3052 ABC transporter ATP-binding protein; ABC transporter 2525368..2527362 Desulfovibrio salexigens DSM 2638 8094133 YP_002991894.1 CDS Desal_2299 NC_012881.1 2527362 2527766 D PFAM: NUDIX hydrolase; KEGG: dvm:DvMF_2380 NUDIX hydrolase; NUDIX hydrolase 2527362..2527766 Desulfovibrio salexigens DSM 2638 8094134 YP_002991895.1 CDS Desal_2300 NC_012881.1 2527941 2528813 D PFAM: methylenetetrahydrofolate reductase; KEGG: dvm:DvMF_3034 5,10-methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 2527941..2528813 Desulfovibrio salexigens DSM 2638 8094135 YP_002991896.1 CDS Desal_2301 NC_012881.1 2528907 2529935 D KEGG: dvl:Dvul_0328 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 2528907..2529935 Desulfovibrio salexigens DSM 2638 8094136 YP_002991897.1 CDS Desal_2302 NC_012881.1 2530129 2531079 D PFAM: aminotransferase class IV; KEGG: dde:Dde_0255 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; class IV aminotransferase 2530129..2531079 Desulfovibrio salexigens DSM 2638 8094137 YP_002991898.1 CDS Desal_2303 NC_012881.1 2531138 2531845 R TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dde:Dde_3107 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase complement(2531138..2531845) Desulfovibrio salexigens DSM 2638 8094138 YP_002991899.1 CDS Desal_2304 NC_012881.1 2531846 2532754 R PFAM: periplasmic binding protein; KEGG: dde:Dde_3106 iron compound ABC transporter periplasmic iron compount-binding protein; periplasmic binding protein complement(2531846..2532754) Desulfovibrio salexigens DSM 2638 8094139 YP_002991900.1 CDS Desal_2305 NC_012881.1 2532699 2533475 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_3105 ATPase; ABC transporter complement(2532699..2533475) Desulfovibrio salexigens DSM 2638 8094140 YP_002991901.1 CDS Desal_2306 NC_012881.1 2533472 2534527 R PFAM: ABC transporter permease; KEGG: dde:Dde_3104 iron compound ABC transporter permease protein; ABC transporter permease complement(2533472..2534527) Desulfovibrio salexigens DSM 2638 8094141 YP_002991902.1 CDS Desal_2307 NC_012881.1 2534546 2535448 R PFAM: anaerobic cobalt chelatase; KEGG: dal:Dalk_0440 anaerobic cobalt chelatase; sirohydrochlorin cobaltochelatase complement(2534546..2535448) Desulfovibrio salexigens DSM 2638 8094142 YP_002991903.1 CDS Desal_2308 NC_012881.1 2535779 2537113 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dde:Dde_2162 MATE efflux family protein; MATE efflux family protein complement(2535779..2537113) Desulfovibrio salexigens DSM 2638 8094143 YP_002991904.1 CDS Desal_2309 NC_012881.1 2537113 2538435 R KEGG: dde:Dde_1422 tRNA (uracil-5-)-methyltransferase Gid; TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A; hypothetical protein complement(2537113..2538435) Desulfovibrio salexigens DSM 2638 8094144 YP_002991905.1 CDS Desal_2310 NC_012881.1 2538535 2539497 D KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 2538535..2539497 Desulfovibrio salexigens DSM 2638 8094145 YP_002991906.1 CDS Desal_2311 NC_012881.1 2539538 2540494 D KEGG: bja:blr1357 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 2539538..2540494 Desulfovibrio salexigens DSM 2638 8094146 YP_002991907.1 CDS Desal_2312 NC_012881.1 2540550 2541767 R PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: dde:Dde_3111 L-serine ammonia-lyase; serine dehydratase subunit alpha complement(2540550..2541767) Desulfovibrio salexigens DSM 2638 8094147 YP_002991908.1 CDS Desal_2313 NC_012881.1 2542048 2542494 R PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: dat:HRM2_45230 protein-tyrosine-phosphatase; protein-tyrosine phosphatase complement(2542048..2542494) Desulfovibrio salexigens DSM 2638 8094148 YP_002991909.1 CDS Desal_2314 NC_012881.1 2542604 2543587 R KEGG: aha:AHA_1230 ABC-type sugar transport system, ATPase component; sugar ABC transporter ATPase complement(2542604..2543587) Desulfovibrio salexigens DSM 2638 8094149 YP_002991910.1 CDS Desal_2315 NC_012881.1 2543621 2544109 R PFAM: UspA domain protein; KEGG: dat:HRM2_06350 UspA10; UspA domain-containing protein complement(2543621..2544109) Desulfovibrio salexigens DSM 2638 8094150 YP_002991911.1 CDS Desal_2316 NC_012881.1 2544150 2545115 R KEGG: dat:HRM2_06360 hypothetical protein; hypothetical protein complement(2544150..2545115) Desulfovibrio salexigens DSM 2638 8094151 YP_002991912.1 CDS Desal_2317 NC_012881.1 2545342 2546379 D PFAM: GTPase EngC; KEGG: dde:Dde_3170 ribosome-associated GTPase; GTPase EngC 2545342..2546379 Desulfovibrio salexigens DSM 2638 8094152 YP_002991913.1 CDS Desal_2318 NC_012881.1 2546432 2547811 R KEGG: tau:Tola_0951 hypothetical protein; hypothetical protein complement(2546432..2547811) Desulfovibrio salexigens DSM 2638 8094153 YP_002991914.1 CDS Desal_2319 NC_012881.1 2547949 2548854 R PFAM: domain of unknown function DUF1731; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: dvl:Dvul_0435 hypothetical protein; hypothetical protein complement(2547949..2548854) Desulfovibrio salexigens DSM 2638 8094154 YP_002991915.1 CDS Desal_2320 NC_012881.1 2548851 2550956 R KEGG: dde:Dde_2950 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: extracellular solute-binding protein family 3; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein; signal transduction histidine kinase, nitrogen specific, NtrB complement(2548851..2550956) Desulfovibrio salexigens DSM 2638 8094155 YP_002991916.1 CDS Desal_2321 NC_012881.1 2551135 2551707 R PFAM: regulatory protein TetR; KEGG: dde:Dde_2002 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2551135..2551707) Desulfovibrio salexigens DSM 2638 8094156 YP_002991917.1 CDS Desal_2322 NC_012881.1 2552536 2552958 D PFAM: UspA domain protein; KEGG: dvm:DvMF_1409 UspA domain protein; UspA domain-containing protein 2552536..2552958 Desulfovibrio salexigens DSM 2638 8094157 YP_002991918.1 CDS Desal_2323 NC_012881.1 2553089 2554006 D KEGG: dal:Dalk_3027 hypothetical protein; hypothetical protein 2553089..2554006 Desulfovibrio salexigens DSM 2638 8094158 YP_002991919.1 CDS Desal_2324 NC_012881.1 2554102 2554536 D PFAM: peptidase S24 and S26 domain protein; KEGG: dvl:Dvul_0458 prophage repressor; peptidase S24 and S26 domain-containing protein 2554102..2554536 Desulfovibrio salexigens DSM 2638 8094159 YP_002991920.1 CDS Desal_2325 NC_012881.1 2554536 2555807 D PFAM: UMUC domain protein DNA-repair protein; KEGG: dvu:DVU2906 UmuC protein; DNA-directed DNA polymerase 2554536..2555807 Desulfovibrio salexigens DSM 2638 8094160 YP_002991921.1 CDS Desal_2326 NC_012881.1 2555991 2556599 D PFAM: TPR repeat-containing protein; SMART: hypothetical protein; KEGG: SLEI family protein; hypothetical protein 2555991..2556599 Desulfovibrio salexigens DSM 2638 8094161 YP_002991922.1 CDS Desal_2327 NC_012881.1 2556996 2558414 D PFAM: carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthase L chain ATP-binding; KEGG: dds:Ddes_0460 pyruvate carboxylase; pyruvate carboxylase 2556996..2558414 Desulfovibrio salexigens DSM 2638 8094162 YP_002991923.1 CDS Desal_2328 NC_012881.1 2558424 2560682 D PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: dvl:Dvul_1016 acetyl-CoA carboxylase; acetyl-CoA carboxylase subunit alpha 2558424..2560682 Desulfovibrio salexigens DSM 2638 8094163 YP_002991924.1 CDS Desal_2329 NC_012881.1 2560824 2561690 D KEGG: hypothetical protein; hypothetical protein 2560824..2561690 Desulfovibrio salexigens DSM 2638 8094164 YP_002991925.1 CDS Desal_2330 NC_012881.1 2561773 2561925 R hypothetical protein complement(2561773..2561925) Desulfovibrio salexigens DSM 2638 8094165 YP_002991926.1 CDS Desal_2331 NC_012881.1 2562065 2562472 R PFAM: regulatory protein LysR; KEGG: sfu:Sfum_0033 transcriptional regulator, ModE family; ModE family transcriptional regulator complement(2562065..2562472) Desulfovibrio salexigens DSM 2638 8094166 YP_002991927.1 CDS Desal_2332 NC_012881.1 2562759 2564150 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dde:Dde_2651 MATE efflux family protein; MATE efflux family protein 2562759..2564150 Desulfovibrio salexigens DSM 2638 8094167 YP_002991928.1 CDS Desal_2333 NC_012881.1 2564143 2565027 D KEGG: dvm:DvMF_0998 hypothetical protein; hypothetical protein 2564143..2565027 Desulfovibrio salexigens DSM 2638 8094168 YP_002991929.1 CDS Desal_2334 NC_012881.1 2565163 2566458 D PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dde:Dde_3572 type I phosphodiesterase/nucleotide pyrophosphatase family protein; type I phosphodiesterase/nucleotide pyrophosphatase 2565163..2566458 Desulfovibrio salexigens DSM 2638 8094169 YP_002991930.1 CDS Desal_2335 NC_012881.1 2566584 2568707 D PFAM: UvrD/REP helicase; KEGG: dvu:DVU0156 ATP-dependent DNA helicase UvrD; UvrD/REP helicase 2566584..2568707 Desulfovibrio salexigens DSM 2638 8094170 YP_002991931.1 CDS Desal_2336 NC_012881.1 2568711 2569682 D KEGG: dvu:DVU0157 thiamin-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase 2568711..2569682 Desulfovibrio salexigens DSM 2638 8094171 YP_002991932.1 CDS Desal_2337 NC_012881.1 2569683 2570339 R TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: dvm:DvMF_2247 channel protein, hemolysin III family; hemolysin III family channel protein complement(2569683..2570339) Desulfovibrio salexigens DSM 2638 8094172 YP_002991933.1 CDS Desal_2338 NC_012881.1 2570568 2571836 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(2570568..2571836) Desulfovibrio salexigens DSM 2638 8094173 YP_002991934.1 CDS Desal_2339 NC_012881.1 2572163 2573869 D PFAM: Na+/H+ antiporter NhaC; KEGG: dps:DP1702 hypothetical protein; Na+/H+ antiporter NhaC 2572163..2573869 Desulfovibrio salexigens DSM 2638 8094174 YP_002991935.1 CDS Desal_2340 NC_012881.1 2574011 2574613 D PFAM: regulatory protein TetR; KEGG: dal:Dalk_0754 transcriptional regulator, TetR family; TetR family transcriptional regulator 2574011..2574613 Desulfovibrio salexigens DSM 2638 8094175 YP_002991936.1 CDS Desal_2341 NC_012881.1 2574616 2575650 D PFAM: secretion protein HlyD family protein; KEGG: rso:RSc0163 lipoprotein; secretion protein HlyD family protein 2574616..2575650 Desulfovibrio salexigens DSM 2638 8094176 YP_002991937.1 CDS Desal_2342 NC_012881.1 2575643 2576557 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rme:Rmet_0349 ABC transporter-related protein; ABC transporter 2575643..2576557 Desulfovibrio salexigens DSM 2638 8094177 YP_002991938.1 CDS Desal_2343 NC_012881.1 2576554 2577693 D PFAM: ABC transporter; KEGG: dde:Dde_0698 transmembrane protein; ABC transporter 2576554..2577693 Desulfovibrio salexigens DSM 2638 8094178 YP_002991939.1 CDS Desal_2344 NC_012881.1 2577862 2578641 D KEGG: dps:DP0156 hypothetical protein; hypothetical protein 2577862..2578641 Desulfovibrio salexigens DSM 2638 8094179 YP_002991940.1 CDS Desal_2345 NC_012881.1 2578642 2579136 D KEGG: dps:DP0157 hypothetical protein; hypothetical protein 2578642..2579136 Desulfovibrio salexigens DSM 2638 8094180 YP_002991941.1 CDS Desal_2346 NC_012881.1 2579133 2579819 R KEGG: slo:Shew_1030 hypothetical protein; hypothetical protein complement(2579133..2579819) Desulfovibrio salexigens DSM 2638 8094181 YP_002991942.1 CDS Desal_2347 NC_012881.1 2579998 2581665 R KEGG: dvm:DvMF_1072 hypothetical protein; hypothetical protein complement(2579998..2581665) Desulfovibrio salexigens DSM 2638 8094182 YP_002991943.1 CDS Desal_2348 NC_012881.1 2581669 2581785 R hypothetical protein complement(2581669..2581785) Desulfovibrio salexigens DSM 2638 8094183 YP_002991944.1 CDS Desal_2349 NC_012881.1 2581782 2582261 R hypothetical protein complement(2581782..2582261) Desulfovibrio salexigens DSM 2638 8094184 YP_002991945.1 CDS Desal_2350 NC_012881.1 2582271 2582531 R KEGG: dvl:Dvul_0645 hypothetical protein; hypothetical protein complement(2582271..2582531) Desulfovibrio salexigens DSM 2638 8094185 YP_002991946.1 CDS Desal_2351 NC_012881.1 2582534 2583124 R KEGG: dvm:DvMF_1107 hypothetical protein; hypothetical protein complement(2582534..2583124) Desulfovibrio salexigens DSM 2638 8094186 YP_002991947.1 CDS Desal_2352 NC_012881.1 2583124 2584665 R TIGRFAM: phage uncharacterized protein; KEGG: dvl:Dvul_0639 hypothetical protein; phage protein complement(2583124..2584665) Desulfovibrio salexigens DSM 2638 8094187 YP_002991948.1 CDS Desal_2353 NC_012881.1 2584634 2584915 R hypothetical protein complement(2584634..2584915) Desulfovibrio salexigens DSM 2638 8094188 YP_002991949.1 CDS Desal_2354 NC_012881.1 2585066 2585290 R hypothetical protein complement(2585066..2585290) Desulfovibrio salexigens DSM 2638 8094189 YP_002991950.1 CDS Desal_2355 NC_012881.1 2585287 2585496 R hypothetical protein complement(2585287..2585496) Desulfovibrio salexigens DSM 2638 8094190 YP_002991951.1 CDS Desal_2356 NC_012881.1 2585489 2585878 R KEGG: dal:Dalk_3982 hypothetical protein; hypothetical protein complement(2585489..2585878) Desulfovibrio salexigens DSM 2638 8094191 YP_002991952.1 CDS Desal_2357 NC_012881.1 2585878 2586081 R hypothetical protein complement(2585878..2586081) Desulfovibrio salexigens DSM 2638 8094192 YP_002991953.1 CDS Desal_2358 NC_012881.1 2586245 2587252 R KEGG: glo:Glov_1970 hypothetical protein; hypothetical protein complement(2586245..2587252) Desulfovibrio salexigens DSM 2638 8094193 YP_002991954.1 CDS Desal_2359 NC_012881.1 2587571 2589283 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dde:Dde_2814 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2587571..2589283 Desulfovibrio salexigens DSM 2638 8094194 YP_002991955.1 CDS Desal_2360 NC_012881.1 2589331 2590296 R PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: scl:sce5062 hypothetical protein; alcohol dehydrogenase GroES domain protein complement(2589331..2590296) Desulfovibrio salexigens DSM 2638 8094195 YP_002991956.1 CDS Desal_2361 NC_012881.1 2590527 2592947 D KEGG: dde:Dde_0703 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 2590527..2592947 Desulfovibrio salexigens DSM 2638 8094196 YP_002991957.1 CDS Desal_2362 NC_012881.1 2593020 2594012 R TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; NmrA family protein; KEGG: noc:Noc_0999 NAD-dependent epimerase/dehydratase; hopanoid-associated sugar epimerase complement(2593020..2594012) Desulfovibrio salexigens DSM 2638 8094197 YP_002991958.1 CDS Desal_2363 NC_012881.1 2594189 2594818 R hypothetical protein complement(2594189..2594818) Desulfovibrio salexigens DSM 2638 8094198 YP_002991959.1 CDS Desal_2364 NC_012881.1 2595159 2595542 D hypothetical protein 2595159..2595542 Desulfovibrio salexigens DSM 2638 8094199 YP_002991960.1 CDS Desal_2365 NC_012881.1 2595565 2596116 D KEGG: avn:Avin_08970 non-hypothetical protein; hypothetical protein 2595565..2596116 Desulfovibrio salexigens DSM 2638 8094200 YP_002991961.1 CDS Desal_2366 NC_012881.1 2596196 2597938 R PFAM: carbon starvation protein CstA; KEGG: dat:HRM2_21730 CstA; carbon starvation protein CstA complement(2596196..2597938) Desulfovibrio salexigens DSM 2638 8094201 YP_002991962.1 CDS Desal_2367 NC_012881.1 2598325 2599077 R PFAM: beta-lactamase domain protein; KEGG: dvl:Dvul_0948 beta-lactamase domain-containing protein; beta-lactamase complement(2598325..2599077) Desulfovibrio salexigens DSM 2638 8094202 YP_002991963.1 CDS Desal_2368 NC_012881.1 2599156 2599491 R PFAM: YCII-related; KEGG: mpt:Mpe_A2445 hypothetical protein; YCII-like protein complement(2599156..2599491) Desulfovibrio salexigens DSM 2638 8094203 YP_002991964.1 CDS Desal_2369 NC_012881.1 2599501 2599917 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gur:Gura_2534 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2599501..2599917) Desulfovibrio salexigens DSM 2638 8094204 YP_002991965.1 CDS Desal_2370 NC_012881.1 2600358 2601131 D PFAM: protein of unknown function DUF169; KEGG: dde:Dde_0597 hypothetical protein; hypothetical protein 2600358..2601131 Desulfovibrio salexigens DSM 2638 8094205 YP_002991966.1 CDS Desal_2371 NC_012881.1 2601306 2602466 D PFAM: protein of unknown function DUF81; KEGG: dde:Dde_0598 hypothetical protein; hypothetical protein 2601306..2602466 Desulfovibrio salexigens DSM 2638 8094206 YP_002991967.1 CDS Desal_2372 NC_012881.1 2602589 2603215 D KEGG: dde:Dde_0600 hypothetical protein; hypothetical protein 2602589..2603215 Desulfovibrio salexigens DSM 2638 8094207 YP_002991968.1 CDS Desal_2373 NC_012881.1 2603268 2604212 D TIGRFAM: phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: dde:Dde_0601 phosphonate-binding periplasmic protein; phosphonate ABC transporter substrate-binding protein 2603268..2604212 Desulfovibrio salexigens DSM 2638 8094208 YP_002991969.1 CDS Desal_2374 NC_012881.1 2604223 2606151 D KEGG: dvm:DvMF_2189 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 2604223..2606151 Desulfovibrio salexigens DSM 2638 8094209 YP_002991970.1 CDS Desal_2375 NC_012881.1 2606197 2608143 D PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; KEGG: dde:Dde_0604 pyruvate,water dikinase; pyruvate phosphate dikinase 2606197..2608143 Desulfovibrio salexigens DSM 2638 8094210 YP_002991971.1 CDS Desal_2376 NC_012881.1 2608156 2608899 R PFAM: TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: gme:Gmet_2032 TPR repeat-containing protein; hypothetical protein complement(2608156..2608899) Desulfovibrio salexigens DSM 2638 8093577 YP_002991972.1 CDS Desal_2377 NC_012881.1 2608977 2610593 R TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: dol:Dole_0035 SpoIID/LytB domain-containing protein; SpoIID/LytB domain-containing protein complement(2608977..2610593) Desulfovibrio salexigens DSM 2638 8091856 YP_002991973.1 CDS Desal_2378 NC_012881.1 2610583 2612973 R KEGG: sat:SYN_02891 fibronectin type III domain-containing protein; hypothetical protein complement(2610583..2612973) Desulfovibrio salexigens DSM 2638 8091857 YP_002991974.1 CDS Desal_2379 NC_012881.1 2612976 2615150 R hypothetical protein complement(2612976..2615150) Desulfovibrio salexigens DSM 2638 8091858 YP_002991975.1 CDS Desal_2380 NC_012881.1 2615170 2616141 R PFAM: protein of unknown function DUF400; KEGG: glo:Glov_1265 hypothetical protein; hypothetical protein complement(2615170..2616141) Desulfovibrio salexigens DSM 2638 8091859 YP_002991976.1 CDS Desal_2381 NC_012881.1 2616156 2617361 R SMART: hypothetical protein; KEGG: glo:Glov_1264 S-layer domain protein; hypothetical protein complement(2616156..2617361) Desulfovibrio salexigens DSM 2638 8091860 YP_002991977.1 CDS Desal_2382 NC_012881.1 2617380 2618486 R KEGG: glo:Glov_1253 hypothetical protein; hypothetical protein complement(2617380..2618486) Desulfovibrio salexigens DSM 2638 8091861 YP_002991978.1 CDS Desal_2383 NC_012881.1 2618517 2619458 R KEGG: mrd:Mrad2831_3034 hypothetical protein; hypothetical protein complement(2618517..2619458) Desulfovibrio salexigens DSM 2638 8091862 YP_002991979.1 CDS Desal_2384 NC_012881.1 2619992 2620462 D KEGG: dvu:DVU1743 hypothetical protein; hypothetical protein 2619992..2620462 Desulfovibrio salexigens DSM 2638 8091863 YP_002991980.1 CDS Desal_2385 NC_012881.1 2620523 2621014 R nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein complement(2620523..2621014) Desulfovibrio salexigens DSM 2638 8091864 YP_002991981.1 CDS Desal_2386 NC_012881.1 2621108 2621437 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1686 anti-sigma B factor antagonist; anti-sigma-factor antagonist complement(2621108..2621437) Desulfovibrio salexigens DSM 2638 8091865 YP_002991982.1 CDS Desal_2387 NC_012881.1 2621577 2621876 D PFAM: YCII-related; KEGG: dps:DP2485 hypothetical protein; YCII-like protein 2621577..2621876 Desulfovibrio salexigens DSM 2638 8091866 YP_002991983.1 CDS Desal_2388 NC_012881.1 2621914 2624136 R PFAM: EAL domain protein; phosphotransferase system EIIC; SMART: EAL domain protein; KEGG: dvm:DvMF_0208 EAL domain protein; diguanylate phosphodiesterase complement(2621914..2624136) Desulfovibrio salexigens DSM 2638 8091867 YP_002991984.1 CDS Desal_2389 NC_012881.1 2624237 2624644 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gsu:GSU0402 hemerythrin family protein; hemerythrin-like metal-binding protein complement(2624237..2624644) Desulfovibrio salexigens DSM 2638 8091868 YP_002991985.1 CDS Desal_2390 NC_012881.1 2624661 2627663 R PFAM: GAF domain protein; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region; KEGG: azo:azo0631 HD-domain-containing protein; metal dependent phosphohydrolase complement(2624661..2627663) Desulfovibrio salexigens DSM 2638 8091869 YP_002991986.1 CDS Desal_2391 NC_012881.1 2627830 2628960 R KEGG: sun:SUN_1027 hypothetical protein; hypothetical protein complement(2627830..2628960) Desulfovibrio salexigens DSM 2638 8091870 YP_002991987.1 CDS nhaB NC_012881.1 2629425 2631047 D involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 2629425..2631047 Desulfovibrio salexigens DSM 2638 8091871 YP_002991988.1 CDS Desal_2393 NC_012881.1 2631208 2631606 D PFAM: protein of unknown function UPF0066; KEGG: ppd:Ppro_2195 hypothetical protein; hypothetical protein 2631208..2631606 Desulfovibrio salexigens DSM 2638 8091872 YP_002991989.1 CDS Desal_2394 NC_012881.1 2631848 2632066 R KEGG: dde:Dde_3614 translation initiation factor 1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; SMART: RNA binding S1 domain protein; translation initiation factor IF-1 complement(2631848..2632066) Desulfovibrio salexigens DSM 2638 8091873 YP_002991990.1 CDS Desal_2395 NC_012881.1 2632252 2632518 R PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: nis:NIS_0278 RNA-binding protein RNP-1; RNP-1 like RNA-binding protein complement(2632252..2632518) Desulfovibrio salexigens DSM 2638 8091874 YP_002991991.1 CDS Desal_2396 NC_012881.1 2632802 2633791 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2632802..2633791) Desulfovibrio salexigens DSM 2638 8091875 YP_002991992.1 CDS ilvH NC_012881.1 2633916 2634398 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(2633916..2634398) Desulfovibrio salexigens DSM 2638 8091876 YP_002991993.1 CDS Desal_2398 NC_012881.1 2634408 2636102 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: dvl:Dvul_1692 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit complement(2634408..2636102) Desulfovibrio salexigens DSM 2638 8091877 YP_002991994.1 CDS Desal_2399 NC_012881.1 2636115 2636333 R KEGG: dvl:Dvul_1693 hypothetical protein; hypothetical protein complement(2636115..2636333) Desulfovibrio salexigens DSM 2638 8091878 YP_002991995.1 CDS Desal_2400 NC_012881.1 2636364 2636684 R PFAM: protein of unknown function DUF167; KEGG: dvl:Dvul_1694 hypothetical protein; hypothetical protein complement(2636364..2636684) Desulfovibrio salexigens DSM 2638 8091879 YP_002991996.1 CDS Desal_2401 NC_012881.1 2636681 2637184 R PFAM: DivIVA family protein; KEGG: dvm:DvMF_0150 DivIVA family protein; DivIVA family protein complement(2636681..2637184) Desulfovibrio salexigens DSM 2638 8091880 YP_002991997.1 CDS Desal_2402 NC_012881.1 2637200 2637490 R PFAM: protein of unknown function YGGT; KEGG: dvm:DvMF_0149 protein of unknown function YGGT; hypothetical protein complement(2637200..2637490) Desulfovibrio salexigens DSM 2638 8091881 YP_002991998.1 CDS Desal_2403 NC_012881.1 2637681 2638391 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: dvl:Dvul_1697 HAD family hydrolase; HAD-superfamily hydrolase complement(2637681..2638391) Desulfovibrio salexigens DSM 2638 8091882 YP_002991999.1 CDS Desal_2404 NC_012881.1 2638403 2639197 R KEGG: dvu:DVU1370 hypothetical protein; hypothetical protein complement(2638403..2639197) Desulfovibrio salexigens DSM 2638 8091883 YP_002992000.1 CDS Desal_2405 NC_012881.1 2639236 2639604 R KEGG: dvl:Dvul_1699 hypothetical protein; hypothetical protein complement(2639236..2639604) Desulfovibrio salexigens DSM 2638 8091884 YP_002992001.1 CDS Desal_2406 NC_012881.1 2639801 2639986 D TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dde:Dde_2177 twin arginine-targeting protein translocase; twin-arginine translocation protein, TatA/E family subunit 2639801..2639986 Desulfovibrio salexigens DSM 2638 8091885 YP_002992002.1 CDS Desal_2407 NC_012881.1 2640059 2640634 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sat:SYN_01716 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(2640059..2640634) Desulfovibrio salexigens DSM 2638 8091886 YP_002992003.1 CDS Desal_2408 NC_012881.1 2640647 2641603 R KEGG: dvm:DvMF_0143 lipoprotein; lipoprotein complement(2640647..2641603) Desulfovibrio salexigens DSM 2638 8091887 YP_002992004.1 CDS Desal_2409 NC_012881.1 2641622 2642671 R KEGG: dol:Dole_0036 hypothetical protein; hypothetical protein complement(2641622..2642671) Desulfovibrio salexigens DSM 2638 8091888 YP_002992005.1 CDS Desal_2410 NC_012881.1 2642727 2643647 R KEGG: dde:Dde_1784 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2642727..2643647) Desulfovibrio salexigens DSM 2638 8091889 YP_002992006.1 CDS Desal_2411 NC_012881.1 2643648 2644148 R KEGG: dvm:DvMF_0173 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase complement(2643648..2644148) Desulfovibrio salexigens DSM 2638 8091890 YP_002992007.1 CDS Desal_2412 NC_012881.1 2644136 2644696 R TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase ; RNA methylase; KEGG: dvm:DvMF_0172 methyltransferase; methyltransferase complement(2644136..2644696) Desulfovibrio salexigens DSM 2638 8091891 YP_002992008.1 CDS Desal_2413 NC_012881.1 2644699 2646306 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dde:Dde_1781 metallo-beta-lactamase family protein; beta-lactamase complement(2644699..2646306) Desulfovibrio salexigens DSM 2638 8091892 YP_002992009.1 CDS Desal_2414 NC_012881.1 2646430 2647317 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dal:Dalk_3949 protein of unknown function DUF6 transmembrane; hypothetical protein 2646430..2647317 Desulfovibrio salexigens DSM 2638 8091893 YP_002992010.1 CDS Desal_2415 NC_012881.1 2647790 2648008 D hypothetical protein 2647790..2648008 Desulfovibrio salexigens DSM 2638 8091894 YP_002992011.1 CDS Desal_2416 NC_012881.1 2648326 2649303 D PFAM: extracellular solute-binding protein family 1; KEGG: pca:Pcar_2087 hypothetical protein; molybdate ABC transporter substrate-binding protein 2648326..2649303 Desulfovibrio salexigens DSM 2638 8091895 YP_002992012.1 CDS Desal_2417 NC_012881.1 2649355 2650143 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_4086 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2649355..2650143 Desulfovibrio salexigens DSM 2638 8091896 YP_002992013.1 CDS Desal_2418 NC_012881.1 2650140 2651177 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dat:HRM2_32540 CysA; ABC transporter 2650140..2651177 Desulfovibrio salexigens DSM 2638 8091897 YP_002992014.1 CDS Desal_2419 NC_012881.1 2651174 2652622 R PFAM: polysaccharide biosynthesis protein; KEGG: dol:Dole_1836 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(2651174..2652622) Desulfovibrio salexigens DSM 2638 8091898 YP_002992015.1 CDS Desal_2420 NC_012881.1 2652612 2653586 R KEGG: pla:Plav_1912 sulfotransferase; hypothetical protein complement(2652612..2653586) Desulfovibrio salexigens DSM 2638 8091899 YP_002992016.1 CDS Desal_2421 NC_012881.1 2653583 2655523 R KEGG: hypothetical protein; hypothetical protein complement(2653583..2655523) Desulfovibrio salexigens DSM 2638 8091900 YP_002992017.1 CDS Desal_2422 NC_012881.1 2655538 2656518 R SMART: ATPase AAA; KEGG: sat:SYN_00778 general secretion pathway protein A; ATPase AAA complement(2655538..2656518) Desulfovibrio salexigens DSM 2638 8091901 YP_002992018.1 CDS Desal_2423 NC_012881.1 2656531 2657418 R TIGRFAM: capsular exopolysaccharide family; KEGG: sat:SYN_00779 tyrosine-protein kinase; capsular polysaccharide biosynthesis protein complement(2656531..2657418) Desulfovibrio salexigens DSM 2638 8091902 YP_002992019.1 CDS Desal_2424 NC_012881.1 2657435 2659186 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: sat:SYN_01204 chain length determinant protein, Wzz-like protein; lipopolysaccharide biosynthesis protein complement(2657435..2659186) Desulfovibrio salexigens DSM 2638 8091903 YP_002992020.1 CDS Desal_2425 NC_012881.1 2659199 2660860 R KEGG: sat:SYN_00781 hypothetical protein; hypothetical protein complement(2659199..2660860) Desulfovibrio salexigens DSM 2638 8091904 YP_002992021.1 CDS Desal_2426 NC_012881.1 2660899 2661474 R PFAM: polysaccharide export protein; KEGG: sat:SYN_00782 periplasmic protein involved in polysaccharide export; polysaccharide export protein complement(2660899..2661474) Desulfovibrio salexigens DSM 2638 8091905 YP_002992022.1 CDS Desal_2427 NC_012881.1 2661549 2662940 R KEGG: tbd:Tbd_1801 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; UDP-phosphate glucose phosphotransferase complement(2661549..2662940) Desulfovibrio salexigens DSM 2638 8091906 YP_002992023.1 CDS Desal_2428 NC_012881.1 2663052 2665436 R PFAM: hypothetical protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: hypothetical protein; KEGG: gme:Gmet_1506 tetratricopeptide TPR_4; hypothetical protein complement(2663052..2665436) Desulfovibrio salexigens DSM 2638 8091907 YP_002992024.1 CDS Desal_2429 NC_012881.1 2665473 2666981 R TIGRFAM: eight transmembrane protein EpsH; EpsI family protein; KEGG: sat:SYN_01097 hypothetical protein; transmembrane protein EpsH complement(2665473..2666981) Desulfovibrio salexigens DSM 2638 8091908 YP_002992025.1 CDS Desal_2430 NC_012881.1 2667118 2668377 R KEGG: cps:CPS_2103 hypothetical protein; hypothetical protein complement(2667118..2668377) Desulfovibrio salexigens DSM 2638 8091909 YP_002992026.1 CDS Desal_2431 NC_012881.1 2668374 2669474 R PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A0253 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2668374..2669474) Desulfovibrio salexigens DSM 2638 8091910 YP_002992027.1 CDS Desal_2432 NC_012881.1 2669722 2671992 D KEGG: dde:Dde_1628 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; CBS domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2669722..2671992 Desulfovibrio salexigens DSM 2638 8091911 YP_002992028.1 CDS Desal_2433 NC_012881.1 2672243 2674435 R TIGRFAM: helicase, RecD/TraA family; KEGG: dde:Dde_2725 helicase RecD/TraA; helicase, RecD/TraA family complement(2672243..2674435) Desulfovibrio salexigens DSM 2638 8091912 YP_002992029.1 CDS Desal_2434 NC_012881.1 2674617 2675222 R TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; KEGG: dvl:Dvul_0187 recombination protein RecR; recombination protein RecR complement(2674617..2675222) Desulfovibrio salexigens DSM 2638 8091913 YP_002992030.1 CDS Desal_2435 NC_012881.1 2675342 2675653 R PFAM: hypothetical protein; KEGG: dde:Dde_0067 hypothetical protein; hypothetical protein complement(2675342..2675653) Desulfovibrio salexigens DSM 2638 8091914 YP_002992031.1 CDS Desal_2436 NC_012881.1 2675723 2677639 R KEGG: dvm:DvMF_2269 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA; DNA polymerase III subunits gamma and tau complement(2675723..2677639) Desulfovibrio salexigens DSM 2638 8091915 YP_002992032.1 CDS Desal_2437 NC_012881.1 2677746 2678669 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(2677746..2678669) Desulfovibrio salexigens DSM 2638 8091916 YP_002992033.1 CDS Desal_2438 NC_012881.1 2678904 2679212 R PFAM: glycoside hydrolase family 13 domain protein; KEGG: dvm:DvMF_1368 glycoside hydrolase family 13 domain protein; glycoside hydrolase family 13 complement(2678904..2679212) Desulfovibrio salexigens DSM 2638 8091917 YP_002992034.1 CDS Desal_2439 NC_012881.1 2679551 2680726 D PFAM: aminotransferase class I and II; KEGG: dde:Dde_2730 aminotransferase; class I and II aminotransferase 2679551..2680726 Desulfovibrio salexigens DSM 2638 8091918 YP_002992035.1 CDS Desal_2440 NC_012881.1 2680817 2682106 D PFAM: homoserine dehydrogenase; Semialdehyde dehydrogenase NAD - binding; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: dde:Dde_2731 homoserine dehydrogenase; homoserine dehydrogenase 2680817..2682106 Desulfovibrio salexigens DSM 2638 8091919 YP_002992036.1 CDS Desal_2441 NC_012881.1 2682116 2683297 D KEGG: gsu:GSU1818 cofactor-independent phosphoglycerate mutase; TIGRFAM: homoserine kinase; phosphonopyruvate decarboxylase-related protein; PFAM: metalloenzyme domain protein; homoserine kinase 2682116..2683297 Desulfovibrio salexigens DSM 2638 8091920 YP_002992037.1 CDS Desal_2442 NC_012881.1 2683300 2683710 D PFAM: thioesterase superfamily protein; KEGG: dde:Dde_2735 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein 2683300..2683710 Desulfovibrio salexigens DSM 2638 8091921 YP_002992038.1 CDS Desal_2443 NC_012881.1 2683942 2684727 D PFAM: amidohydrolase 2; KEGG: dvm:DvMF_1422 amidohydrolase 2; amidohydrolase 2 2683942..2684727 Desulfovibrio salexigens DSM 2638 8091922 YP_002992039.1 CDS Desal_2444 NC_012881.1 2684757 2685263 R KEGG: dal:Dalk_2748 hypothetical protein; hypothetical protein complement(2684757..2685263) Desulfovibrio salexigens DSM 2638 8091923 YP_002992040.1 CDS Desal_2445 NC_012881.1 2685260 2685727 R KEGG: gbm:Gbem_0516 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2685260..2685727) Desulfovibrio salexigens DSM 2638 8091924 YP_002992041.1 CDS Desal_2446 NC_012881.1 2685744 2686313 R PFAM: regulatory protein TetR; KEGG: scl:sce4712 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2685744..2686313) Desulfovibrio salexigens DSM 2638 8091925 YP_002992042.1 CDS Desal_2447 NC_012881.1 2686469 2686966 R PFAM: cytochrome c class III; KEGG: dde:Dde_3182 cytochrome c3; cytochrome c class III complement(2686469..2686966) Desulfovibrio salexigens DSM 2638 8091454 YP_002992043.1 CDS Desal_2448 NC_012881.1 2687474 2689015 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_1510 ATPase; ABC transporter complement(2687474..2689015) Desulfovibrio salexigens DSM 2638 8091056 YP_002992044.1 CDS Desal_2449 NC_012881.1 2689025 2689945 R PFAM: inner-membrane translocator; KEGG: dde:Dde_1509 branched chain amino acid ABC transporter permease protein; inner-membrane translocator complement(2689025..2689945) Desulfovibrio salexigens DSM 2638 8091057 YP_002992045.1 CDS Desal_2450 NC_012881.1 2689958 2691016 R PFAM: inner-membrane translocator; KEGG: dvl:Dvul_1926 inner-membrane translocator; inner-membrane translocator complement(2689958..2691016) Desulfovibrio salexigens DSM 2638 8091058 YP_002992046.1 CDS Desal_2451 NC_012881.1 2691023 2692099 R PFAM: basic membrane lipoprotein; KEGG: dps:DP0677 hypothetical protein; basic membrane lipoprotein complement(2691023..2692099) Desulfovibrio salexigens DSM 2638 8091059 YP_002992047.1 CDS Desal_2452 NC_012881.1 2692275 2692772 R catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase complement(2692275..2692772) Desulfovibrio salexigens DSM 2638 8091060 YP_002992048.1 CDS Desal_2453 NC_012881.1 2693106 2694191 D KEGG: dde:Dde_3087 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 2693106..2694191 Desulfovibrio salexigens DSM 2638 8091061 YP_002992049.1 CDS Desal_2454 NC_012881.1 2694193 2696121 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: dat:HRM2_48810 dipeptidyl anminopeptidase; peptidase S9 prolyl oligopeptidase active site domain protein 2694193..2696121 Desulfovibrio salexigens DSM 2638 8091062 YP_002992050.1 CDS Desal_2455 NC_012881.1 2696324 2698108 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dps:DP2071 hypothetical protein; metal dependent phosphohydrolase 2696324..2698108 Desulfovibrio salexigens DSM 2638 8091063 YP_002992051.1 CDS Desal_2456 NC_012881.1 2698112 2699434 R KEGG: aeh:Mlg_1929 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase complement(2698112..2699434) Desulfovibrio salexigens DSM 2638 8091064 YP_002992052.1 CDS Desal_2457 NC_012881.1 2699453 2700223 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: hch:HCH_04060 amino acid ABC transporter periplasmic protein; family 3 extracellular solute-binding protein complement(2699453..2700223) Desulfovibrio salexigens DSM 2638 8091065 YP_002992053.1 CDS Desal_2458 NC_012881.1 2700287 2701720 R PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; HI0933 family protein; KEGG: dde:Dde_1463 mercuric reductase; pyridine nucleotide-disulfide oxidoreductase dimerisation subunit complement(2700287..2701720) Desulfovibrio salexigens DSM 2638 8091066 YP_002992054.1 CDS Desal_2459 NC_012881.1 2701733 2702689 R PFAM: glucokinase; KEGG: dde:Dde_1461 glucokinase; glucokinase complement(2701733..2702689) Desulfovibrio salexigens DSM 2638 8091067 YP_002992055.1 CDS Desal_2460 NC_012881.1 2702902 2703771 R KEGG: dat:HRM2_36680 MotA3; MotA3 protein complement(2702902..2703771) Desulfovibrio salexigens DSM 2638 8091068 YP_002992056.1 CDS Desal_2461 NC_012881.1 2703783 2704505 R PFAM: OmpA/MotB domain protein; KEGG: dat:HRM2_36690 MotB3; OmpA/MotB domain-containing protein complement(2703783..2704505) Desulfovibrio salexigens DSM 2638 8091069 YP_002992057.1 CDS Desal_2462 NC_012881.1 2704846 2705802 R KEGG: dar:Daro_1994 metallo-beta-lactamase family protein; metallo-beta-lactamase family protein complement(2704846..2705802) Desulfovibrio salexigens DSM 2638 8091070 YP_002992058.1 CDS Desal_2463 NC_012881.1 2705961 2706563 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: dvm:DvMF_2587 maf protein; maf protein 2705961..2706563 Desulfovibrio salexigens DSM 2638 8091071 YP_002992059.1 CDS Desal_2464 NC_012881.1 2706674 2708431 D PFAM: AMP-dependent synthetase and ligase; KEGG: dde:Dde_0193 AMP-binding enzyme family protein; AMP-dependent synthetase and ligase 2706674..2708431 Desulfovibrio salexigens DSM 2638 8091072 YP_002992060.1 CDS Desal_2465 NC_012881.1 2708606 2709262 D SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vcj:VCD_003673 hypothetical protein; AraC family transcriptional regulator 2708606..2709262 Desulfovibrio salexigens DSM 2638 8091073 YP_002992061.1 CDS Desal_2466 NC_012881.1 2709247 2709636 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mxa:MXAN_0496 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2709247..2709636) Desulfovibrio salexigens DSM 2638 8091074 YP_002992062.1 CDS Desal_2467 NC_012881.1 2709879 2710733 D PFAM: GCN5-related N-acetyltransferase; KEGG: avn:Avin_24790 N-acetyltransferase; N-acetyltransferase GCN5 2709879..2710733 Desulfovibrio salexigens DSM 2638 8091075 YP_002992063.1 CDS Desal_2468 NC_012881.1 2710859 2711224 D hypothetical protein 2710859..2711224 Desulfovibrio salexigens DSM 2638 8091076 YP_002992064.1 CDS Desal_2469 NC_012881.1 2711521 2712447 D hypothetical protein 2711521..2712447 Desulfovibrio salexigens DSM 2638 8091077 YP_002992065.1 CDS Desal_2470 NC_012881.1 2712530 2713147 R PFAM: protein of unknown function DUF1271; SMART: zinc finger CDGSH-type domain protein; KEGG: mlo:mlr4660 hypothetical protein; hypothetical protein complement(2712530..2713147) Desulfovibrio salexigens DSM 2638 8091078 YP_002992066.1 CDS Desal_2471 NC_012881.1 2713376 2713996 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mmw:Mmwyl1_0101 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 2713376..2713996 Desulfovibrio salexigens DSM 2638 8091079 YP_002992067.1 CDS Desal_2472 NC_012881.1 2714007 2714753 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: hch:HCH_03473 amino acid ABC transporter periplasmic protein; family 3 extracellular solute-binding protein complement(2714007..2714753) Desulfovibrio salexigens DSM 2638 8091080 YP_002992068.1 CDS Desal_2473 NC_012881.1 2714901 2715512 D hypothetical protein 2714901..2715512 Desulfovibrio salexigens DSM 2638 8091081 YP_002992069.1 CDS Desal_2474 NC_012881.1 2715523 2716164 D PFAM: cyclase family protein; KEGG: dal:Dalk_2911 cyclase family protein; cyclase family protein 2715523..2716164 Desulfovibrio salexigens DSM 2638 8091082 YP_002992070.1 CDS Desal_2475 NC_012881.1 2716395 2716643 D KEGG: dde:Dde_1017 hypothetical protein; hypothetical protein 2716395..2716643 Desulfovibrio salexigens DSM 2638 8091083 YP_002992071.1 CDS Desal_2476 NC_012881.1 2716744 2717208 D PFAM: phosphatidylglycerophosphatase A; KEGG: dds:Ddes_0497 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 2716744..2717208 Desulfovibrio salexigens DSM 2638 8091084 YP_002992072.1 CDS Desal_2477 NC_012881.1 2717326 2717916 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_3633 peptidoglycan-associated lipoprotein; peptidoglycan-associated lipoprotein complement(2717326..2717916) Desulfovibrio salexigens DSM 2638 8091085 YP_002992073.1 CDS Desal_2478 NC_012881.1 2718070 2719443 R PFAM: hypothetical protein; KEGG: dde:Dde_3632 TolB protein; hypothetical protein complement(2718070..2719443) Desulfovibrio salexigens DSM 2638 8091086 YP_002992074.1 CDS Desal_2479 NC_012881.1 2719459 2720406 R TIGRFAM: protein TolA; TonB family protein; KEGG: dvm:DvMF_2362 protein TolA; protein TolA complement(2719459..2720406) Desulfovibrio salexigens DSM 2638 8091087 YP_002992075.1 CDS Desal_2480 NC_012881.1 2720430 2720846 R TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dvm:DvMF_2363 protein TolR; protein TolR complement(2720430..2720846) Desulfovibrio salexigens DSM 2638 8091088 YP_002992076.1 CDS Desal_2481 NC_012881.1 2720850 2721569 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3629 TolQ protein; MotA/TolQ/ExbB proton channel complement(2720850..2721569) Desulfovibrio salexigens DSM 2638 8091089 YP_002992077.1 CDS Desal_2482 NC_012881.1 2721600 2722346 R PFAM: silent information regulator protein Sir2; KEGG: nam:NAMH_0804 NAD-dependent deacetylase; silent information regulator protein Sir2 complement(2721600..2722346) Desulfovibrio salexigens DSM 2638 8091090 YP_002992078.1 CDS Desal_2483 NC_012881.1 2722356 2723012 R PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pca:Pcar_1215 hypothetical protein; hypothetical protein complement(2722356..2723012) Desulfovibrio salexigens DSM 2638 8091091 YP_002992079.1 CDS Desal_2484 NC_012881.1 2723022 2723501 R PFAM: protein of unknown function DUF151; KEGG: dvm:DvMF_1331 protein of unknown function DUF151; hypothetical protein complement(2723022..2723501) Desulfovibrio salexigens DSM 2638 8091092 YP_002992080.1 CDS Desal_2485 NC_012881.1 2723495 2724871 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(2723495..2724871) Desulfovibrio salexigens DSM 2638 8091093 YP_002992081.1 CDS Desal_2486 NC_012881.1 2725015 2725329 R hypothetical protein complement(2725015..2725329) Desulfovibrio salexigens DSM 2638 8091094 YP_002992082.1 CDS Desal_2487 NC_012881.1 2725341 2725790 R KEGG: similar to predicted protein; hypothetical protein complement(2725341..2725790) Desulfovibrio salexigens DSM 2638 8091095 YP_002992083.1 CDS Desal_2488 NC_012881.1 2725938 2726243 R hypothetical protein complement(2725938..2726243) Desulfovibrio salexigens DSM 2638 8091096 YP_002992084.1 CDS Desal_2489 NC_012881.1 2726243 2727199 R KEGG: dol:Dole_0842 YD repeat-containing protein; hypothetical protein complement(2726243..2727199) Desulfovibrio salexigens DSM 2638 8091097 YP_002992085.1 CDS Desal_2490 NC_012881.1 2727283 2727525 R KEGG: dvm:DvMF_0438 hypothetical protein; hypothetical protein complement(2727283..2727525) Desulfovibrio salexigens DSM 2638 8091098 YP_002992086.1 CDS Desal_2491 NC_012881.1 2727529 2729061 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(2727529..2729061) Desulfovibrio salexigens DSM 2638 8091099 YP_002992087.1 CDS Desal_2492 NC_012881.1 2729082 2729468 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: dvl:Dvul_1517 iojap-like protein; iojap family protein complement(2729082..2729468) Desulfovibrio salexigens DSM 2638 8091100 YP_002992088.1 CDS Desal_2493 NC_012881.1 2730065 2731375 D KEGG: dde:Dde_2084 phenylacetate-CoA ligase; phenylacetate--CoA ligase 2730065..2731375 Desulfovibrio salexigens DSM 2638 8091101 YP_002992089.1 CDS Desal_2494 NC_012881.1 2731403 2731834 D PFAM: amino acid-binding ACT domain protein; KEGG: dvl:Dvul_1522 amino acid-binding ACT domain-containing protein; amino acid-binding ACT protein 2731403..2731834 Desulfovibrio salexigens DSM 2638 8091102 YP_002992090.1 CDS Desal_2495 NC_012881.1 2732000 2733427 D PFAM: protein of unknown function UPF0027; KEGG: rfr:Rfer_3852 hypothetical protein; hypothetical protein 2732000..2733427 Desulfovibrio salexigens DSM 2638 8091103 YP_002992091.1 CDS Desal_2496 NC_012881.1 2733469 2733813 D PFAM: Hpt domain protein; SMART: Hpt domain protein; KEGG: dvm:DvMF_0217 Hpt protein; Hpt protein 2733469..2733813 Desulfovibrio salexigens DSM 2638 8091104 YP_002992092.1 CDS Desal_2497 NC_012881.1 2733873 2735738 R PFAM: potassium transporter; KEGG: sfu:Sfum_1808 K+ potassium transporter; potassium transporter complement(2733873..2735738) Desulfovibrio salexigens DSM 2638 8091105 YP_002992093.1 CDS Desal_2498 NC_012881.1 2735828 2736268 R hypothetical protein complement(2735828..2736268) Desulfovibrio salexigens DSM 2638 8091106 YP_002992094.1 CDS Desal_2499 NC_012881.1 2736357 2736965 R KEGG: cla:Cla_0317 adenylylsulfate kinase; adenylylsulfate kinase-like protein complement(2736357..2736965) Desulfovibrio salexigens DSM 2638 8091107 YP_002992095.1 CDS Desal_2500 NC_012881.1 2736937 2738019 R KEGG: scl:sce6010 hypothetical protein; hypothetical protein complement(2736937..2738019) Desulfovibrio salexigens DSM 2638 8091108 YP_002992096.1 CDS Desal_2501 NC_012881.1 2738177 2739109 R PFAM: PfkB domain protein; KEGG: dvm:DvMF_2935 PfkB domain protein; PfkB domain-containing protein complement(2738177..2739109) Desulfovibrio salexigens DSM 2638 8091109 YP_002992097.1 CDS Desal_2502 NC_012881.1 2739219 2739533 R PFAM: CutA1 divalent ion tolerance protein; KEGG: dal:Dalk_3429 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(2739219..2739533) Desulfovibrio salexigens DSM 2638 8091110 YP_002992098.1 CDS Desal_2503 NC_012881.1 2739543 2739830 R KEGG: dvm:DvMF_1979 hypothetical protein; hypothetical protein complement(2739543..2739830) Desulfovibrio salexigens DSM 2638 8091111 YP_002992099.1 CDS Desal_2504 NC_012881.1 2739964 2740626 D KEGG: dvm:DvMF_2937 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 2739964..2740626 Desulfovibrio salexigens DSM 2638 8091112 YP_002992100.1 CDS tgt NC_012881.1 2740626 2741762 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2740626..2741762 Desulfovibrio salexigens DSM 2638 8091113 YP_002992101.1 CDS Desal_2506 NC_012881.1 2741762 2742406 D PFAM: protein of unknown function DUF218; KEGG: dde:Dde_2846 hypothetical protein; hypothetical protein 2741762..2742406 Desulfovibrio salexigens DSM 2638 8091114 YP_002992102.1 CDS Desal_2507 NC_012881.1 2742450 2743238 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: dde:Dde_3029 carbon monoxide dehydrogenase accessory protein CooC; cobyrinic acid ac-diamide synthase complement(2742450..2743238) Desulfovibrio salexigens DSM 2638 8091115 YP_002992103.1 CDS Desal_2508 NC_012881.1 2743250 2745127 R KEGG: dde:Dde_3028 carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; carbon-monoxide dehydrogenase, catalytic subunit complement(2743250..2745127) Desulfovibrio salexigens DSM 2638 8091116 YP_002992104.1 CDS Desal_2509 NC_012881.1 2745326 2745976 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: dde:Dde_3027 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(2745326..2745976) Desulfovibrio salexigens DSM 2638 8091117 YP_002992105.1 CDS Desal_2510 NC_012881.1 2745979 2747349 R TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: dde:Dde_3064 ribonuclease BN; ribonuclease BN complement(2745979..2747349) Desulfovibrio salexigens DSM 2638 8091118 YP_002992106.1 CDS Desal_2511 NC_012881.1 2747424 2750669 R PFAM: AsmA family protein; KEGG: tgr:Tgr7_2948 AsmA family protein; AsmA family protein complement(2747424..2750669) Desulfovibrio salexigens DSM 2638 8091119 YP_002992107.1 CDS Desal_2512 NC_012881.1 2750763 2751614 R PFAM: protein of unknown function DUF89; KEGG: dvl:Dvul_0388 hypothetical protein; hypothetical protein complement(2750763..2751614) Desulfovibrio salexigens DSM 2638 8091120 YP_002992108.1 CDS Desal_2513 NC_012881.1 2751813 2752118 D KEGG: dps:DP1398 hypothetical protein; hypothetical protein 2751813..2752118 Desulfovibrio salexigens DSM 2638 8091121 YP_002992109.1 CDS Desal_2514 NC_012881.1 2752167 2753027 D PFAM: cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_2263 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 2752167..2753027 Desulfovibrio salexigens DSM 2638 8091122 YP_002992110.1 CDS Desal_2515 NC_012881.1 2753029 2753886 D PFAM: cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_3201 iron-sulfur cluster-binding/ATPase domain-containing protein; cobyrinic acid ac-diamide synthase 2753029..2753886 Desulfovibrio salexigens DSM 2638 8091123 YP_002992111.1 CDS Desal_2516 NC_012881.1 2753899 2754270 D PFAM: Protein of unknown function CGGC region; KEGG: dal:Dalk_2266 protein of unknown function CGGC region; hypothetical protein 2753899..2754270 Desulfovibrio salexigens DSM 2638 8091124 YP_002992112.1 CDS Desal_2517 NC_012881.1 2754280 2754525 D TIGRFAM: regulatory protein, FmdB family; KEGG: dal:Dalk_2386 regulatory protein, FmdB family; FmdB family regulatory protein 2754280..2754525 Desulfovibrio salexigens DSM 2638 8091125 YP_002992113.1 CDS Desal_2518 NC_012881.1 2754565 2755437 R KEGG: ilo:IL0688 periplasmic substrate-binding protein; hypothetical protein complement(2754565..2755437) Desulfovibrio salexigens DSM 2638 8091126 YP_002992114.1 CDS Desal_2519 NC_012881.1 2755511 2756350 R PFAM: protein of unknown function DUF1009; KEGG: dvm:DvMF_3002 protein of unknown function DUF1009; hypothetical protein complement(2755511..2756350) Desulfovibrio salexigens DSM 2638 8091127 YP_002992115.1 CDS Desal_2520 NC_012881.1 2756352 2757155 R KEGG: dde:Dde_1374 UDP-N-acetylglucosamine acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase complement(2756352..2757155) Desulfovibrio salexigens DSM 2638 8091128 YP_002992116.1 CDS Desal_2521 NC_012881.1 2757155 2757619 R TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: dvl:Dvul_0895 Fis family transcriptional regulator; 3-hydroxyacyl-ACP dehydratase complement(2757155..2757619) Desulfovibrio salexigens DSM 2638 8091129 YP_002992117.1 CDS Desal_2522 NC_012881.1 2757621 2758649 R TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; transferase hexapeptide repeat containing protein; KEGG: dvm:DvMF_2999 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(2757621..2758649) Desulfovibrio salexigens DSM 2638 8094005 YP_002992118.1 CDS Desal_2523 NC_012881.1 2758656 2759183 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: dvm:DvMF_2998 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(2758656..2759183) Desulfovibrio salexigens DSM 2638 8091594 YP_002992119.1 CDS Desal_2524 NC_012881.1 2759280 2761994 R TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: dvm:DvMF_2996 outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein complement(2759280..2761994) Desulfovibrio salexigens DSM 2638 8091595 YP_002992120.1 CDS Desal_2525 NC_012881.1 2761981 2762664 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvl:Dvul_0890 ABC transporter; ABC transporter complement(2761981..2762664) Desulfovibrio salexigens DSM 2638 8091596 YP_002992121.1 CDS Desal_2526 NC_012881.1 2762657 2763886 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: dde:Dde_1366 LolC/E family lipoprotein releasing system, transmembrane protein; lipoprotein releasing system transmembrane protein LolC/E family complement(2762657..2763886) Desulfovibrio salexigens DSM 2638 8091597 YP_002992122.1 CDS Desal_2527 NC_012881.1 2763883 2765409 R TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dde:Dde_1365 lysyl-tRNA synthetase; lysyl-tRNA synthetase complement(2763883..2765409) Desulfovibrio salexigens DSM 2638 8091598 YP_002992123.1 CDS Desal_2528 NC_012881.1 2766224 2767045 R KEGG: vcj:VCD_000360 hypothetical protein; hypothetical protein complement(2766224..2767045) Desulfovibrio salexigens DSM 2638 8091601 YP_002992124.1 CDS Desal_2529 NC_012881.1 2767420 2767830 D KEGG: dat:HRM2_24520 hypothetical protein; hypothetical protein 2767420..2767830 Desulfovibrio salexigens DSM 2638 8091603 YP_002992125.1 CDS Desal_2530 NC_012881.1 2767889 2769316 R KEGG: dol:Dole_2125 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase complement(2767889..2769316) Desulfovibrio salexigens DSM 2638 8091604 YP_002992126.1 CDS Desal_2531 NC_012881.1 2769564 2770040 D PFAM: outer membrane chaperone Skp (OmpH); KEGG: dvm:DvMF_0178 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 2769564..2770040 Desulfovibrio salexigens DSM 2638 8091605 YP_002992127.1 CDS Desal_2532 NC_012881.1 2770199 2771056 D KEGG: asa:ASA_3859 hypothetical protein; hypothetical protein 2770199..2771056 Desulfovibrio salexigens DSM 2638 8091606 YP_002992128.1 CDS Desal_2533 NC_012881.1 2771056 2771649 D hypothetical protein 2771056..2771649 Desulfovibrio salexigens DSM 2638 8091607 YP_002992129.1 CDS Desal_2534 NC_012881.1 2771747 2773405 D PFAM: Na+/Picotransporter; KEGG: tgr:Tgr7_0444 hypothetical protein; Na+/Picotransporter 2771747..2773405 Desulfovibrio salexigens DSM 2638 8091608 YP_002992130.1 CDS Desal_2535 NC_012881.1 2773422 2774570 D KEGG: dde:Dde_2854 hypothetical protein; hypothetical protein 2773422..2774570 Desulfovibrio salexigens DSM 2638 8091609 YP_002992131.1 CDS Desal_2536 NC_012881.1 2774577 2776223 R KEGG: dde:Dde_0558 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(2774577..2776223) Desulfovibrio salexigens DSM 2638 8091610 YP_002992132.1 CDS Desal_2537 NC_012881.1 2776207 2777367 R PFAM: iron-containing alcohol dehydrogenase; KEGG: gur:Gura_3532 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(2776207..2777367) Desulfovibrio salexigens DSM 2638 8091611 YP_002992133.1 CDS Desal_2538 NC_012881.1 2777616 2779151 R KEGG: sat:SYN_01420 cytoplasmic protein; hypothetical protein complement(2777616..2779151) Desulfovibrio salexigens DSM 2638 8091612 YP_002992134.1 CDS Desal_2539 NC_012881.1 2780023 2780907 R TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; KEGG: dal:Dalk_5021 transcriptional regulator, ArgP, LysR family; LysR family transcriptional regulator complement(2780023..2780907) Desulfovibrio salexigens DSM 2638 8091615 YP_002992135.1 CDS Desal_2540 NC_012881.1 2781006 2781626 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dvl:Dvul_2359 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 2781006..2781626 Desulfovibrio salexigens DSM 2638 8091616 YP_002992136.1 CDS Desal_2541 NC_012881.1 2781623 2781931 R PFAM: branched-chain amino acid ABC transporter; KEGG: gbm:Gbem_1388 branched-chain amino acid ABC transporter; branched-chain amino acid ABC transporter complement(2781623..2781931) Desulfovibrio salexigens DSM 2638 8091617 YP_002992137.1 CDS Desal_2542 NC_012881.1 2781931 2782629 R PFAM: AzlC family protein; KEGG: gbm:Gbem_1389 AzlC family protein; AzlC family protein complement(2781931..2782629) Desulfovibrio salexigens DSM 2638 8091618 YP_002992138.1 CDS Desal_2543 NC_012881.1 2782810 2785299 R TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; dihydroxyacetone kinase, phosphotransfer subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PTS system fructose subfamily IIA component; PEP-utilising protein mobile region; phosphoryl transfer system HPr; KEGG: dvm:DvMF_2584 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(2782810..2785299) Desulfovibrio salexigens DSM 2638 8091619 YP_002992139.1 CDS Desal_2544 NC_012881.1 2785338 2785967 R TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: dde:Dde_1179 DAK2 domain-containing protein; dihydroxyacetone kinase subunit DhaL complement(2785338..2785967) Desulfovibrio salexigens DSM 2638 8091620 YP_002992140.1 CDS Desal_2545 NC_012881.1 2786159 2787217 R with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK complement(2786159..2787217) Desulfovibrio salexigens DSM 2638 8091621 YP_002992141.1 CDS Desal_2546 NC_012881.1 2787684 2788319 D PFAM: protein of unknown function DUF1555; KEGG: sat:SYN_01117 hypothetical protein; hypothetical protein 2787684..2788319 Desulfovibrio salexigens DSM 2638 8091622 YP_002992142.1 CDS Desal_2547 NC_012881.1 2788568 2789203 D hypothetical protein 2788568..2789203 Desulfovibrio salexigens DSM 2638 8091623 YP_002992143.1 CDS Desal_2548 NC_012881.1 2789270 2790277 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ppr:PBPRB1561 ribose operon repressor, RbsR; LacI family transcriptional regulator complement(2789270..2790277) Desulfovibrio salexigens DSM 2638 8091624 YP_002992144.1 CDS Desal_2549 NC_012881.1 2790285 2791211 R TIGRFAM: ribokinase; PFAM: PfkB domain protein; phosphomethylpyrimidine kinase type-1; KEGG: vfm:VFMJ11_1544 ribokinase; ribokinase complement(2790285..2791211) Desulfovibrio salexigens DSM 2638 8091625 YP_002992145.1 CDS Desal_2550 NC_012881.1 2791274 2792149 R periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB complement(2791274..2792149) Desulfovibrio salexigens DSM 2638 8091626 YP_002992146.1 CDS rbsC NC_012881.1 2792171 2793139 R functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease complement(2792171..2793139) Desulfovibrio salexigens DSM 2638 8091627 YP_002992147.1 CDS Desal_2552 NC_012881.1 2793178 2794668 R with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein complement(2793178..2794668) Desulfovibrio salexigens DSM 2638 8091628 YP_002992148.1 CDS Desal_2553 NC_012881.1 2794678 2795097 R PFAM: RbsD or FucU transport; KEGG: vfm:VFMJ11_1540 high affinity ribose transport protein RbsD; transport protein RbsD/FucU complement(2794678..2795097) Desulfovibrio salexigens DSM 2638 8091629 YP_002992149.1 CDS Desal_2554 NC_012881.1 2795278 2796168 D KEGG: aha:AHA_4142 hypothetical protein; hypothetical protein 2795278..2796168 Desulfovibrio salexigens DSM 2638 8091630 YP_002992150.1 CDS Desal_2555 NC_012881.1 2796447 2797178 D PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_0756 glycosyl transferase family 2; family 2 glycosyl transferase 2796447..2797178 Desulfovibrio salexigens DSM 2638 8091632 YP_002992151.1 CDS Desal_2556 NC_012881.1 2797179 2797868 D PFAM: hypothetical protein; KEGG: dvm:DvMF_0758 hypothetical protein; hypothetical protein 2797179..2797868 Desulfovibrio salexigens DSM 2638 8091633 YP_002992152.1 CDS Desal_2557 NC_012881.1 2797979 2798431 R hypothetical protein complement(2797979..2798431) Desulfovibrio salexigens DSM 2638 8091634 YP_002992153.1 CDS Desal_2558 NC_012881.1 2798613 2799596 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: dde:Dde_0483 ATPase; ATPase AAA 2798613..2799596 Desulfovibrio salexigens DSM 2638 8091635 YP_002992154.1 CDS Desal_2559 NC_012881.1 2799607 2800920 D KEGG: dde:Dde_0484 hypothetical protein; hypothetical protein 2799607..2800920 Desulfovibrio salexigens DSM 2638 8091636 YP_002992155.1 CDS Desal_2560 NC_012881.1 2801027 2801485 D KEGG: dde:Dde_0485 hypothetical protein; hypothetical protein 2801027..2801485 Desulfovibrio salexigens DSM 2638 8091637 YP_002992156.1 CDS Desal_2561 NC_012881.1 2801639 2802196 D PFAM: protein of unknown function DUF204; KEGG: dvl:Dvul_0455 hypothetical protein; hypothetical protein 2801639..2802196 Desulfovibrio salexigens DSM 2638 8091638 YP_002992157.1 CDS Desal_2562 NC_012881.1 2802343 2803305 D PFAM: alpha/beta hydrolase fold; KEGG: dde:Dde_1531 hypothetical protein; alpha/beta hydrolase fold protein 2802343..2803305 Desulfovibrio salexigens DSM 2638 8091639 YP_002992158.1 CDS Desal_2563 NC_012881.1 2803341 2803682 R KEGG: glo:Glov_3445 Hpt sensor hybrid histidine kinase; Hpt protein complement(2803341..2803682) Desulfovibrio salexigens DSM 2638 8093973 YP_002992159.1 CDS Desal_2564 NC_012881.1 2803739 2805550 R PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dvl:Dvul_0339 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(2803739..2805550) Desulfovibrio salexigens DSM 2638 8090981 YP_002992160.1 CDS Desal_2565 NC_012881.1 2805829 2806131 R PFAM: stress responsive alpha-beta barrel domain protein; KEGG: dvl:Dvul_0264 stress responsive alpha-beta barrel domain-containing protein; stress responsive alpha-beta barrel domain protein complement(2805829..2806131) Desulfovibrio salexigens DSM 2638 8090982 YP_002992161.1 CDS Desal_2566 NC_012881.1 2806237 2808042 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dvl:Dvul_0339 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2806237..2808042) Desulfovibrio salexigens DSM 2638 8090983 YP_002992162.1 CDS Desal_2567 NC_012881.1 2808377 2810536 R PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dps:DP1019 hypothetical protein; hypothetical protein complement(2808377..2810536) Desulfovibrio salexigens DSM 2638 8090984 YP_002992163.1 CDS Desal_2568 NC_012881.1 2810539 2811162 R PFAM: protein of unknown function DUF162; KEGG: dde:Dde_3244 hypothetical protein; hypothetical protein complement(2810539..2811162) Desulfovibrio salexigens DSM 2638 8090985 YP_002992164.1 CDS Desal_2569 NC_012881.1 2811462 2812652 R TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: dde:Dde_3242 acetate kinase; acetate kinase complement(2811462..2812652) Desulfovibrio salexigens DSM 2638 8090986 YP_002992165.1 CDS Desal_2570 NC_012881.1 2812652 2814769 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(2812652..2814769) Desulfovibrio salexigens DSM 2638 8090987 YP_002992166.1 CDS Desal_2571 NC_012881.1 2814977 2816272 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP1021 glycolate oxidase, iron-sulfur subunit (GlcF); hypothetical protein complement(2814977..2816272) Desulfovibrio salexigens DSM 2638 8090988 YP_002992167.1 CDS Desal_2572 NC_012881.1 2816274 2817659 R PFAM: FAD linked oxidase domain protein; KEGG: dps:DP1022 glycolate oxidase subunit (GlcD); FAD linked oxidase domain-containing protein complement(2816274..2817659) Desulfovibrio salexigens DSM 2638 8090989 YP_002992168.1 CDS Desal_2573 NC_012881.1 2817768 2819480 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dps:DP1023 hypothetical protein; L-lactate transport complement(2817768..2819480) Desulfovibrio salexigens DSM 2638 8090990 YP_002992169.1 CDS Desal_2575 NC_012881.1 2823665 2825155 R PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: dps:DP1024 Ntr family two-component response regulator; Fis family transcriptionall regulator complement(2823665..2825155) Desulfovibrio salexigens DSM 2638 8090992 YP_002992170.1 CDS Desal_2576 NC_012881.1 2825148 2827808 R KEGG: dps:DP1025 Ntr family two-component system sensory/regulatory protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS/PAC sensor hybrid histidine kinase complement(2825148..2827808) Desulfovibrio salexigens DSM 2638 8090993 YP_002992171.1 CDS Desal_2577 NC_012881.1 2827991 2829025 D KEGG: pla:Plav_1708 hypothetical protein; hypothetical protein 2827991..2829025 Desulfovibrio salexigens DSM 2638 8090994 YP_002992172.1 CDS Desal_2578 NC_012881.1 2829226 2829405 D hypothetical protein 2829226..2829405 Desulfovibrio salexigens DSM 2638 8090995 YP_002992173.1 CDS Desal_2579 NC_012881.1 2829553 2829939 R KEGG: ftn:FTN_1736 hypothetical protein; hypothetical protein complement(2829553..2829939) Desulfovibrio salexigens DSM 2638 8090996 YP_002992174.1 CDS Desal_2580 NC_012881.1 2830370 2831662 D KEGG: dde:Dde_3030 hypothetical protein; hypothetical protein 2830370..2831662 Desulfovibrio salexigens DSM 2638 8090997 YP_002992175.1 CDS Desal_2581 NC_012881.1 2831799 2832599 D KEGG: dde:Dde_3031 hypothetical protein; hypothetical protein 2831799..2832599 Desulfovibrio salexigens DSM 2638 8090998 YP_002992176.1 CDS Desal_2582 NC_012881.1 2832599 2833057 D KEGG: dde:Dde_3032 hypothetical protein; hypothetical protein 2832599..2833057 Desulfovibrio salexigens DSM 2638 8090999 YP_002992177.1 CDS Desal_2583 NC_012881.1 2833058 2834203 D KEGG: dde:Dde_3033 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2833058..2834203 Desulfovibrio salexigens DSM 2638 8091000 YP_002992178.1 CDS Desal_2584 NC_012881.1 2834266 2834661 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvl:Dvul_0539 response regulator receiver protein; response regulator receiver protein complement(2834266..2834661) Desulfovibrio salexigens DSM 2638 8091001 YP_002992179.1 CDS Desal_2585 NC_012881.1 2834896 2836602 R PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: rhodanese domain protein; KEGG: dol:Dole_1052 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase dimerisation subunit complement(2834896..2836602) Desulfovibrio salexigens DSM 2638 8091002 YP_002992180.1 CDS Desal_2586 NC_012881.1 2836889 2837365 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: dvm:DvMF_2301 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C complement(2836889..2837365) Desulfovibrio salexigens DSM 2638 8091003 YP_002992181.1 CDS Desal_2587 NC_012881.1 2837367 2838488 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(2837367..2838488) Desulfovibrio salexigens DSM 2638 8091004 YP_002992182.1 CDS Desal_2588 NC_012881.1 2838492 2838713 R TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: dvl:Dvul_0146 DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega complement(2838492..2838713) Desulfovibrio salexigens DSM 2638 8091005 YP_002992183.1 CDS Desal_2589 NC_012881.1 2838751 2840061 R KEGG: dde:Dde_0246 hypothetical protein; hypothetical protein complement(2838751..2840061) Desulfovibrio salexigens DSM 2638 8091006 YP_002992184.1 CDS Desal_2590 NC_012881.1 2840269 2841018 D PFAM: PP-loop domain protein; KEGG: dvl:Dvul_0147 PP-loop domain-containing protein; PP-loop domain-containing protein 2840269..2841018 Desulfovibrio salexigens DSM 2638 8091007 YP_002992185.1 CDS Desal_2591 NC_012881.1 2841095 2842000 D PFAM: peptidase M23; KEGG: dde:Dde_0243 M24/M37 family peptidase; peptidase M23 2841095..2842000 Desulfovibrio salexigens DSM 2638 8091008 YP_002992186.1 CDS Desal_2592 NC_012881.1 2842181 2842984 D TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: dvm:DvMF_2016 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 2842181..2842984 Desulfovibrio salexigens DSM 2638 8091009 YP_002992187.1 CDS flhB NC_012881.1 2842996 2844057 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 2842996..2844057 Desulfovibrio salexigens DSM 2638 8091010 YP_002992188.1 CDS flhA NC_012881.1 2844126 2846213 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2844126..2846213 Desulfovibrio salexigens DSM 2638 8091011 YP_002992189.1 CDS Desal_2595 NC_012881.1 2846227 2847315 D KEGG: dde:Dde_0381 flagellar biosynthesis protein FlhF; flagellar biosynthesis protein FlhF 2846227..2847315 Desulfovibrio salexigens DSM 2638 8091012 YP_002992190.1 CDS Desal_2596 NC_012881.1 2847420 2848247 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: dvm:DvMF_2012 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 2847420..2848247 Desulfovibrio salexigens DSM 2638 8091013 YP_002992191.1 CDS Desal_2597 NC_012881.1 2848189 2848980 D TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 type 2; KEGG: dvl:Dvul_0159 FliA/WhiG family RNA polymerase sigma factor; RNA polymerase sigma 28 subunit FliA/WhiG 2848189..2848980 Desulfovibrio salexigens DSM 2638 8091014 YP_002992192.1 CDS Desal_2598 NC_012881.1 2848991 2849374 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvm:DvMF_2010 response regulator receiver protein; response regulator receiver protein 2848991..2849374 Desulfovibrio salexigens DSM 2638 8091015 YP_002992193.1 CDS Desal_2599 NC_012881.1 2849477 2850181 D PFAM: flagellar basal body-associated protein FliL; KEGG: dde:Dde_0385 flagellar basal body-associated protein; flagellar basal body-associated protein FliL 2849477..2850181 Desulfovibrio salexigens DSM 2638 8091016 YP_002992194.1 CDS Desal_2600 NC_012881.1 2850187 2850507 D KEGG: dde:Dde_0386 hypothetical protein; hypothetical protein 2850187..2850507 Desulfovibrio salexigens DSM 2638 8091017 YP_002992195.1 CDS Desal_2601 NC_012881.1 2850585 2850995 D KEGG: dvm:DvMF_2007 hypothetical protein; hypothetical protein 2850585..2850995 Desulfovibrio salexigens DSM 2638 8091018 YP_002992196.1 CDS Desal_2602 NC_012881.1 2851002 2851835 D KEGG: dde:Dde_0388 hypothetical protein; hypothetical protein 2851002..2851835 Desulfovibrio salexigens DSM 2638 8091019 YP_002992197.1 CDS Desal_2603 NC_012881.1 2851832 2853964 R PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: mms:mma_0018 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(2851832..2853964) Desulfovibrio salexigens DSM 2638 8091020 YP_002992198.1 CDS lpxC NC_012881.1 2854131 2855057 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(2854131..2855057) Desulfovibrio salexigens DSM 2638 8091021 YP_002992199.1 CDS Desal_2605 NC_012881.1 2855233 2856096 R TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase type 11; methyltransferase small; methyltransferase type 12; ribosomal L11 methyltransferase; KEGG: dvu:DVU2916 HemK protein; HemK family modification methylase complement(2855233..2856096) Desulfovibrio salexigens DSM 2638 8091022 YP_002992200.1 CDS Desal_2606 NC_012881.1 2856170 2857243 R TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: dde:Dde_2984 peptide chain release factor 1; peptide chain release factor 1 complement(2856170..2857243) Desulfovibrio salexigens DSM 2638 8091023 YP_002992201.1 CDS Desal_2607 NC_012881.1 2857243 2858259 R PFAM: protein of unknown function DUF1385; KEGG: dde:Dde_2983 lipoprotein; hypothetical protein complement(2857243..2858259) Desulfovibrio salexigens DSM 2638 8091024 YP_002992202.1 CDS Desal_2608 NC_012881.1 2858440 2858670 R TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: dvl:Dvul_0453 50S ribosomal protein L31; 50S ribosomal protein L31 complement(2858440..2858670) Desulfovibrio salexigens DSM 2638 8091025 YP_002992203.1 CDS Desal_2609 NC_012881.1 2858981 2859298 R KEGG: dde:Dde_0762 dissimilatory sulfite reductase, gamma subunit; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; TusE/DsrC/DsvC family sulfur relay protein complement(2858981..2859298) Desulfovibrio salexigens DSM 2638 8091026 YP_002992204.1 CDS Desal_2610 NC_012881.1 2859480 2861207 R PFAM: protein of unknown function DUF181; TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: dvl:Dvul_1028 hypothetical protein; hypothetical protein complement(2859480..2861207) Desulfovibrio salexigens DSM 2638 8091027 YP_002992205.1 CDS Desal_2611 NC_012881.1 2861207 2861926 R KEGG: dvl:Dvul_1029 methyltransferase small; methyltransferase small complement(2861207..2861926) Desulfovibrio salexigens DSM 2638 8091028 YP_002992206.1 CDS Desal_2612 NC_012881.1 2863276 2863638 D TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: dvl:Dvul_1083 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator 2863276..2863638 Desulfovibrio salexigens DSM 2638 8091037 YP_002992207.1 CDS Desal_2613 NC_012881.1 2863655 2865166 D PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: dde:Dde_2344 hypothetical protein; hypothetical protein 2863655..2865166 Desulfovibrio salexigens DSM 2638 8091038 YP_002992208.1 CDS Desal_2614 NC_012881.1 2865286 2866275 R KEGG: dvm:DvMF_2067 hypothetical protein; hypothetical protein complement(2865286..2866275) Desulfovibrio salexigens DSM 2638 8091039 YP_002992209.1 CDS Desal_2615 NC_012881.1 2866415 2869054 R KEGG: dde:Dde_2351 hypothetical protein; hypothetical protein complement(2866415..2869054) Desulfovibrio salexigens DSM 2638 8091040 YP_002992210.1 CDS Desal_2616 NC_012881.1 2869084 2869446 D KEGG: dde:Dde_2352 hypothetical protein; hypothetical protein 2869084..2869446 Desulfovibrio salexigens DSM 2638 8091041 YP_002992211.1 CDS Desal_2617 NC_012881.1 2869493 2870371 R PFAM: glycosyl transferase family 2; KEGG: dal:Dalk_2812 glycosyl transferase family 2; family 2 glycosyl transferase complement(2869493..2870371) Desulfovibrio salexigens DSM 2638 8091042 YP_002992212.1 CDS Desal_2618 NC_012881.1 2870549 2871652 D PFAM: glycosyl transferase group 1; KEGG: dde:Dde_1656 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 2870549..2871652 Desulfovibrio salexigens DSM 2638 8091043 YP_002992213.1 CDS Desal_2619 NC_012881.1 2871887 2872798 R KEGG: dde:Dde_3065 membrane-bound lytic murein transglycosylase B-like; membrane-bound lytic murein transglycosylase B-like protein complement(2871887..2872798) Desulfovibrio salexigens DSM 2638 8091044 YP_002992214.1 CDS Desal_2621 NC_012881.1 2873169 2874593 R PFAM: outer membrane efflux protein; KEGG: dde:Dde_3627 outer membrane efflux protein; outer membrane efflux protein complement(2873169..2874593) Desulfovibrio salexigens DSM 2638 8091046 YP_002992215.1 CDS Desal_2622 NC_012881.1 2874706 2875482 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: dvm:DvMF_1339 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein complement(2874706..2875482) Desulfovibrio salexigens DSM 2638 8091047 YP_002992216.1 CDS Desal_2623 NC_012881.1 2875502 2876206 R PFAM: protein of unknown function DUF1614; KEGG: sfu:Sfum_0878 protein of unknown function DUF1614; hypothetical protein complement(2875502..2876206) Desulfovibrio salexigens DSM 2638 8091048 YP_002992217.1 CDS Desal_2624 NC_012881.1 2876337 2877218 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: ecd:ECDH10B_2189 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 2876337..2877218 Desulfovibrio salexigens DSM 2638 8091049 YP_002992218.1 CDS Desal_2625 NC_012881.1 2877218 2877703 D hypothetical protein 2877218..2877703 Desulfovibrio salexigens DSM 2638 8091050 YP_002992219.1 CDS Desal_2626 NC_012881.1 2877769 2877912 R hypothetical protein complement(2877769..2877912) Desulfovibrio salexigens DSM 2638 8091051 YP_002992220.1 CDS Desal_2627 NC_012881.1 2878137 2878688 D PFAM: type IV pilus assembly PilZ; KEGG: dvm:DvMF_0818 type IV pilus assembly PilZ; type IV pilus assembly PilZ 2878137..2878688 Desulfovibrio salexigens DSM 2638 8091052 YP_002992221.1 CDS Desal_2628 NC_012881.1 2878725 2879687 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: dvm:DvMF_0209 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 2878725..2879687 Desulfovibrio salexigens DSM 2638 8091053 YP_002992222.1 CDS Desal_2629 NC_012881.1 2879774 2880211 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sat:SYN_00226 signal transduction histidine kinase; response regulator receiver protein complement(2879774..2880211) Desulfovibrio salexigens DSM 2638 8091054 YP_002992223.1 CDS Desal_2630 NC_012881.1 2880368 2880739 R KEGG: dde:Dde_2478 hypothetical protein; hypothetical protein complement(2880368..2880739) Desulfovibrio salexigens DSM 2638 8091055 YP_002992224.1 CDS Desal_2631 NC_012881.1 2880830 2881033 R hypothetical protein complement(2880830..2881033) Desulfovibrio salexigens DSM 2638 8094081 YP_002992225.1 CDS Desal_2632 NC_012881.1 2881277 2881894 D KEGG: dde:Dde_2591 hypothetical protein; hypothetical protein 2881277..2881894 Desulfovibrio salexigens DSM 2638 8093679 YP_002992226.1 CDS Desal_2633 NC_012881.1 2881929 2882462 D KEGG: dvl:Dvul_0780 hypothetical protein; hypothetical protein 2881929..2882462 Desulfovibrio salexigens DSM 2638 8093680 YP_002992227.1 CDS Desal_2634 NC_012881.1 2882465 2883028 D PFAM: lipolytic protein G-D-S-L family; KEGG: rpe:RPE_0303 lipolytic enzyme, G-D-S-L family; G-D-S-L family lipolytic protein 2882465..2883028 Desulfovibrio salexigens DSM 2638 8093681 YP_002992228.1 CDS Desal_2635 NC_012881.1 2883088 2884236 D PFAM: patatin; KEGG: lhk:LHK_03113 probable transmembrane protein; patatin 2883088..2884236 Desulfovibrio salexigens DSM 2638 8093682 YP_002992229.1 CDS Desal_2636 NC_012881.1 2884233 2885450 D PFAM: extracellular ligand-binding receptor; KEGG: cjd:JJD26997_0769 high affinity branched-chain amino acid ABC transporter periplasmic amino acid-binding protein; extracellular ligand-binding receptor 2884233..2885450 Desulfovibrio salexigens DSM 2638 8093683 YP_002992230.1 CDS Desal_2637 NC_012881.1 2885453 2886130 R PFAM: hypothetical protein; KEGG: vfi:VF_A0098 inner membrane protein; hypothetical protein complement(2885453..2886130) Desulfovibrio salexigens DSM 2638 8093684 YP_002992231.1 CDS Desal_2638 NC_012881.1 2886281 2887978 D PFAM: protein of unknown function DUF181; KEGG: dvl:Dvul_1835 hypothetical protein; hypothetical protein 2886281..2887978 Desulfovibrio salexigens DSM 2638 8093685 YP_002992232.1 CDS Desal_2639 NC_012881.1 2888531 2890939 D KEGG: dde:Dde_2411 methyl-accepting chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 2888531..2890939 Desulfovibrio salexigens DSM 2638 8093687 YP_002992233.1 CDS Desal_2640 NC_012881.1 2890977 2892197 D KEGG: sfu:Sfum_1120 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: regulatory protein LuxR; PAS domain containing protein; LuxR family transcriptional regulator 2890977..2892197 Desulfovibrio salexigens DSM 2638 8093688 YP_002992234.1 CDS Desal_2641 NC_012881.1 2892309 2893073 D PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein; KEGG: glo:Glov_3113 multi-sensor hybrid histidine kinase; histidine kinase A domain-containing protein 2892309..2893073 Desulfovibrio salexigens DSM 2638 8093689 YP_002992235.1 CDS Desal_2642 NC_012881.1 2893197 2895356 R KEGG: dat:HRM2_p00340 predicted sensory/regulatory protein RpfC; TIGRFAM: PAS sensor protein; PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor protein complement(2893197..2895356) Desulfovibrio salexigens DSM 2638 8093690 YP_002992236.1 CDS Desal_2643 NC_012881.1 2895346 2896149 R KEGG: glo:Glov_1547 extracellular solute-binding protein family 1; extracellular solute-binding protein complement(2895346..2896149) Desulfovibrio salexigens DSM 2638 8093691 YP_002992237.1 CDS Desal_2644 NC_012881.1 2896382 2896675 D PFAM: protein of unknown function DUF997; KEGG: dde:Dde_3322 membrane protein-like; hypothetical protein 2896382..2896675 Desulfovibrio salexigens DSM 2638 8093692 YP_002992238.1 CDS panF NC_012881.1 2896672 2898144 D mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 2896672..2898144 Desulfovibrio salexigens DSM 2638 8093693 YP_002992239.1 CDS Desal_2646 NC_012881.1 2898296 2898964 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: pub:SAR11_1175 phosphate transport regulon regulator PhoU; phosphate uptake regulator PhoU 2898296..2898964 Desulfovibrio salexigens DSM 2638 8093694 YP_002992240.1 CDS Desal_2647 NC_012881.1 2899219 2899419 D TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: dde:Dde_1554 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2899219..2899419 Desulfovibrio salexigens DSM 2638 8093695 YP_002992241.1 CDS Desal_2648 NC_012881.1 2899425 2900201 D PFAM: thiazole biosynthesis family protein; KEGG: dde:Dde_1555 thiazole synthase; thiazole biosynthesis family protein 2899425..2900201 Desulfovibrio salexigens DSM 2638 8093696 YP_002992242.1 CDS thiH NC_012881.1 2900208 2901329 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 2900208..2901329 Desulfovibrio salexigens DSM 2638 8093697 YP_002992243.1 CDS Desal_2650 NC_012881.1 2901326 2901949 D catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF 2901326..2901949 Desulfovibrio salexigens DSM 2638 8093698 YP_002992244.1 CDS Desal_2651 NC_012881.1 2901959 2902609 D KEGG: dvu:DVU2091 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2901959..2902609 Desulfovibrio salexigens DSM 2638 8093699 YP_002992245.1 CDS Desal_2652 NC_012881.1 2902709 2903215 R KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein complement(2902709..2903215) Desulfovibrio salexigens DSM 2638 8093700 YP_002992246.1 CDS Desal_2653 NC_012881.1 2903379 2903900 R KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein complement(2903379..2903900) Desulfovibrio salexigens DSM 2638 8093701 YP_002992247.1 CDS Desal_2654 NC_012881.1 2903916 2904425 R KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein complement(2903916..2904425) Desulfovibrio salexigens DSM 2638 8093702 YP_002992248.1 CDS Desal_2655 NC_012881.1 2904526 2904858 D hypothetical protein 2904526..2904858 Desulfovibrio salexigens DSM 2638 8093703 YP_002992249.1 CDS Desal_2656 NC_012881.1 2904912 2905640 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bvi:Bcep1808_7674 methyltransferase type 11; methyltransferase type 11 complement(2904912..2905640) Desulfovibrio salexigens DSM 2638 8093704 YP_002992250.1 CDS Desal_2657 NC_012881.1 2905797 2906705 R PFAM: formate dehydrogenase accessory protein; KEGG: dde:Dde_3515 formate dehydrogenase formation protein FdhE; formate dehydrogenase accessory protein complement(2905797..2906705) Desulfovibrio salexigens DSM 2638 8093705 YP_002992251.1 CDS Desal_2658 NC_012881.1 2906986 2907720 R KEGG: dat:HRM2_03440 FdhB2; FdhB2 complement(2906986..2907720) Desulfovibrio salexigens DSM 2638 8093706 YP_002992252.1 CDS Desal_2659 NC_012881.1 2907742 2910783 R KEGG: dat:HRM2_03430 FdhA2; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha complement(2907742..2910783) Desulfovibrio salexigens DSM 2638 8093707 YP_002992253.1 CDS Desal_2660 NC_012881.1 2911020 2911544 D KEGG: eba:ebA2161 hypothetical protein; hypothetical protein 2911020..2911544 Desulfovibrio salexigens DSM 2638 8093708 YP_002992254.1 CDS Desal_2661 NC_012881.1 2911537 2911731 D hypothetical protein 2911537..2911731 Desulfovibrio salexigens DSM 2638 8093709 YP_002992255.1 CDS Desal_2662 NC_012881.1 2911904 2912308 R PFAM: OsmC family protein; KEGG: dvm:DvMF_3179 OsmC family protein; OsmC family protein complement(2911904..2912308) Desulfovibrio salexigens DSM 2638 8093710 YP_002992256.1 CDS Desal_2663 NC_012881.1 2912738 2913559 D KEGG: abo:ABO_0849 hypothetical protein; hypothetical protein 2912738..2913559 Desulfovibrio salexigens DSM 2638 8093711 YP_002992257.1 CDS Desal_2664 NC_012881.1 2913687 2915342 D PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: dps:DP2330 indole-3-pyruvate decarboxylase; thiamine pyrophosphate 2913687..2915342 Desulfovibrio salexigens DSM 2638 8093712 YP_002992258.1 CDS Desal_2665 NC_012881.1 2915422 2915841 R PFAM: regulatory protein LysR; KEGG: sfu:Sfum_0033 transcriptional regulator, ModE family; ModE family transcriptional regulator complement(2915422..2915841) Desulfovibrio salexigens DSM 2638 8093713 YP_002992259.1 CDS Desal_2666 NC_012881.1 2915851 2917536 R PFAM: formylmethanofuran dehydrogenase subunit E region; molybdopterin binding domain; KEGG: dvl:Dvul_2793 molybdopterin binding domain-containing protein; formylmethanofuran dehydrogenase subunit E complement(2915851..2917536) Desulfovibrio salexigens DSM 2638 8093714 YP_002992260.1 CDS Desal_2667 NC_012881.1 2917924 2918811 R PFAM: beta-lactamase domain protein; KEGG: bpy:Bphyt_5423 beta-lactamase domain protein; beta-lactamase complement(2917924..2918811) Desulfovibrio salexigens DSM 2638 8093715 YP_002992261.1 CDS Desal_2668 NC_012881.1 2918930 2919841 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpy:Bphyt_5426 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2918930..2919841) Desulfovibrio salexigens DSM 2638 8093716 YP_002992262.1 CDS Desal_2669 NC_012881.1 2920079 2921263 D PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dps:DP1366 hypothetical protein; 2-hydroxyglutaryl-CoA dehydratase subunit D 2920079..2921263 Desulfovibrio salexigens DSM 2638 8093717 YP_002992263.1 CDS Desal_2670 NC_012881.1 2921283 2922416 D KEGG: dat:HRM2_07950 ABC-type transporter substrate binding protein; ABC transporter substrate-binding protein 2921283..2922416 Desulfovibrio salexigens DSM 2638 8093718 YP_002992264.1 CDS Desal_2671 NC_012881.1 2922537 2923373 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_07960 ABC-type transporter membrane spanning protein; ABC transporter permease 2922537..2923373 Desulfovibrio salexigens DSM 2638 8093719 YP_002992265.1 CDS Desal_2672 NC_012881.1 2923374 2924135 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dat:HRM2_07970 ABC-type transporter ATP-binding protein; ABC transporter 2923374..2924135 Desulfovibrio salexigens DSM 2638 8093720 YP_002992266.1 CDS Desal_2673 NC_012881.1 2924219 2924674 D PFAM: protein of unknown function DUF188; KEGG: saz:Sama_3557 hypothetical protein; hypothetical protein 2924219..2924674 Desulfovibrio salexigens DSM 2638 8093721 YP_002992267.1 CDS Desal_2674 NC_012881.1 2924780 2926057 D KEGG: dat:HRM2_37970 two-component fusion protein (N:acyl-CoA reductase-C:coenzyme F390 synthetase); two-component fusion protein (N:acyl-CoA reductase-C:coenzyme F390 synthetase) 2924780..2926057 Desulfovibrio salexigens DSM 2638 8093722 YP_002992268.1 CDS Desal_2675 NC_012881.1 2926127 2927215 R PFAM: Dual specificity protein phosphatase; SMART: Dual specificity protein phosphatase; KEGG: dde:Dde_0605 protein tyrosine phosphatase / dual specificity protein phosphatase; dual specificity protein phosphatase complement(2926127..2927215) Desulfovibrio salexigens DSM 2638 8093723 YP_002992269.1 CDS Desal_2676 NC_012881.1 2927208 2929655 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dat:HRM2_46050 PpsA9; pyruvate water dikinase complement(2927208..2929655) Desulfovibrio salexigens DSM 2638 8093724 YP_002992270.1 CDS Desal_2677 NC_012881.1 2929913 2932180 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Cache domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: gme:Gmet_1707 PAS/PAC sensor hybrid histidine kinase; cache sensor hybrid histidine kinase 2929913..2932180 Desulfovibrio salexigens DSM 2638 8093725 YP_002992271.1 CDS Desal_2678 NC_012881.1 2932290 2932703 D KEGG: hypothetical protein; hypothetical protein 2932290..2932703 Desulfovibrio salexigens DSM 2638 8093726 YP_002992272.1 CDS Desal_2679 NC_012881.1 2932766 2934145 D PFAM: beta-lactamase domain protein; rhodanese domain protein; SMART: rhodanese domain protein; KEGG: dat:HRM2_35830 metallo-beta-lactamase superfamily protein; beta-lactamase 2932766..2934145 Desulfovibrio salexigens DSM 2638 8093727 YP_002992273.1 CDS Desal_2680 NC_012881.1 2934188 2935246 R PFAM: Metal-dependent hydrolase HDOD; metal-dependent phosphohydrolase HD sub domain; KEGG: dde:Dde_3231 signal transduction protein; metal dependent phosphohydrolase complement(2934188..2935246) Desulfovibrio salexigens DSM 2638 8093728 YP_002992274.1 CDS Desal_2681 NC_012881.1 2935271 2936335 R PFAM: Metal-dependent hydrolase HDOD; metal-dependent phosphohydrolase HD sub domain; KEGG: dde:Dde_3231 signal transduction protein; metal dependent phosphohydrolase complement(2935271..2936335) Desulfovibrio salexigens DSM 2638 8093729 YP_002992275.1 CDS Desal_2682 NC_012881.1 2936354 2937310 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: dal:Dalk_1693 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2936354..2937310) Desulfovibrio salexigens DSM 2638 8093730 YP_002992276.1 CDS Desal_2683 NC_012881.1 2937329 2938699 R KEGG: lch:Lcho_0022 transmembrane protein; transmembrane protein complement(2937329..2938699) Desulfovibrio salexigens DSM 2638 8093731 YP_002992277.1 CDS Desal_2684 NC_012881.1 2938703 2940208 R PFAM: glycosyl transferase group 1; KEGG: pha:PSHAa0704 hypothetical protein; group 1 glycosyl transferase complement(2938703..2940208) Desulfovibrio salexigens DSM 2638 8093732 YP_002992278.1 CDS Desal_2685 NC_012881.1 2940195 2941307 R KEGG: nmu:Nmul_A2435 hypothetical protein; hypothetical protein complement(2940195..2941307) Desulfovibrio salexigens DSM 2638 8093733 YP_002992279.1 CDS Desal_2686 NC_012881.1 2941288 2942697 R PFAM: GAF domain protein; GGDEF domain containing protein; SMART: GAF domain protein; GGDEF domain containing protein; KEGG: dol:Dole_1741 diguanylate cyclase; GAF sensor-containing diguanylate cyclase complement(2941288..2942697) Desulfovibrio salexigens DSM 2638 8093734 YP_002992280.1 CDS Desal_2687 NC_012881.1 2942727 2944571 R PFAM: sporulation domain protein; KEGG: dde:Dde_2070 hypothetical protein; sporulation domain protein complement(2942727..2944571) Desulfovibrio salexigens DSM 2638 8093735 YP_002992281.1 CDS Desal_2688 NC_012881.1 2944609 2947449 R PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: TPR Domain containing protein; hypothetical protein complement(2944609..2947449) Desulfovibrio salexigens DSM 2638 8093736 YP_002992282.1 CDS Desal_2689 NC_012881.1 2947446 2949530 R KEGG: ajs:Ajs_0773 polysaccharide deacetylase; polysaccharide deacetylase complement(2947446..2949530) Desulfovibrio salexigens DSM 2638 8093737 YP_002992283.1 CDS Desal_2690 NC_012881.1 2949514 2950335 R PFAM: TM1410 hypothetical-related protein; KEGG: rso:RSc2276 signal peptide protein; hypothetical protein complement(2949514..2950335) Desulfovibrio salexigens DSM 2638 8093738 YP_002992284.1 CDS Desal_2691 NC_012881.1 2950347 2950907 R KEGG: nmu:Nmul_A2437 lipoprotein; lipoprotein complement(2950347..2950907) Desulfovibrio salexigens DSM 2638 8093739 YP_002992285.1 CDS Desal_2692 NC_012881.1 2951150 2952154 D TIGRFAM: cysteinyl-tRNA synthetase; PFAM: TM1410 hypothetical-related protein; KEGG: rsq:Rsph17025_4079 sulfate ABC transporter periplasmic sulfate-binding protein; cysteinyl-tRNA synthetase 2951150..2952154 Desulfovibrio salexigens DSM 2638 8093740 YP_002992286.1 CDS Desal_2693 NC_012881.1 2952144 2953532 R PFAM: high-affinity nickel-transporter; KEGG: gur:Gura_2769 high-affinity nickel-transporter; high-affinity nickel-transporter complement(2952144..2953532) Desulfovibrio salexigens DSM 2638 8093741 YP_002992287.1 CDS Desal_2694 NC_012881.1 2953688 2954314 D PFAM: regulatory protein TetR; KEGG: dde:Dde_2217 TetR family transcriptional regulator; TetR family transcriptional regulator 2953688..2954314 Desulfovibrio salexigens DSM 2638 8093742 YP_002992288.1 CDS Desal_2695 NC_012881.1 2954348 2955358 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dde:Dde_2216 extracellular solute-binding protein; TRAP dicarboxylate transporter- DctP subunit 2954348..2955358 Desulfovibrio salexigens DSM 2638 8093743 YP_002992289.1 CDS Desal_2696 NC_012881.1 2955436 2955921 D KEGG: dat:HRM2_35010 TRAP-type C4-dicarboxylate transport system, small permease component; TRAP-type C4-dicarboxylate transport system, small permease component 2955436..2955921 Desulfovibrio salexigens DSM 2638 8093744 YP_002992290.1 CDS Desal_2697 NC_012881.1 2955922 2957235 D TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dde:Dde_2214 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM 2955922..2957235 Desulfovibrio salexigens DSM 2638 8093745 YP_002992291.1 CDS Desal_2698 NC_012881.1 2957309 2957620 R hypothetical protein complement(2957309..2957620) Desulfovibrio salexigens DSM 2638 8093746 YP_002992292.1 CDS Desal_2699 NC_012881.1 2957622 2958254 R hypothetical protein complement(2957622..2958254) Desulfovibrio salexigens DSM 2638 8093747 YP_002992293.1 CDS Desal_2700 NC_012881.1 2958478 2960283 R PFAM: citrate transporter; KEGG: dal:Dalk_1272 TrkA-C domain protein; citrate transporter complement(2958478..2960283) Desulfovibrio salexigens DSM 2638 8093748 YP_002992294.1 CDS Desal_2701 NC_012881.1 2966699 2967778 D PFAM: protein of unknown function DUF939; KEGG: dde:Dde_0097 hypothetical protein; hypothetical protein 2966699..2967778 Desulfovibrio salexigens DSM 2638 8093856 YP_002992295.1 CDS Desal_2702 NC_012881.1 2967756 2968463 R KEGG: dps:DP2816 hypothetical protein; hypothetical protein complement(2967756..2968463) Desulfovibrio salexigens DSM 2638 8093857 YP_002992296.1 CDS Desal_2703 NC_012881.1 2968620 2969513 D PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4205 transcriptional regulator, AraC family; AraC family transcriptional regulator 2968620..2969513 Desulfovibrio salexigens DSM 2638 8093858 YP_002992297.1 CDS Desal_2704 NC_012881.1 2969538 2969999 D PFAM: transcription activator effector binding; KEGG: dal:Dalk_4205 transcriptional regulator, AraC family; transcription activator effector binding 2969538..2969999 Desulfovibrio salexigens DSM 2638 8093859 YP_002992298.1 CDS Desal_2705 NC_012881.1 2970065 2970943 R KEGG: cla:Cla_0124 hypothetical protein, probable ATP/GTP-binding protein; ATP/GTP-binding protein complement(2970065..2970943) Desulfovibrio salexigens DSM 2638 8093860 YP_002992299.1 CDS Desal_2706 NC_012881.1 2971005 2971886 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abu:Abu_1051 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2971005..2971886) Desulfovibrio salexigens DSM 2638 8093861 YP_002992300.1 CDS asnC NC_012881.1 2971933 2973324 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(2971933..2973324) Desulfovibrio salexigens DSM 2638 8093862 YP_002992301.1 CDS Desal_2708 NC_012881.1 2973577 2974074 D PFAM: rubrerythrin; rubredoxin-type Fe(Cys)4 protein; KEGG: dde:Dde_1320 rubrerythrin; rubrerythrin 2973577..2974074 Desulfovibrio salexigens DSM 2638 8093863 YP_002992302.1 CDS Desal_2709 NC_012881.1 2974285 2976312 D KEGG: dvl:Dvul_0317 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA; signal recognition particle-docking protein FtsY 2974285..2976312 Desulfovibrio salexigens DSM 2638 8093864 YP_002992303.1 CDS Desal_2710 NC_012881.1 2976418 2977326 R PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: dde:Dde_0975 pseudouridylate synthase 23S RNA-specific-like; pseudouridine synthase complement(2976418..2977326) Desulfovibrio salexigens DSM 2638 8093865 YP_002992304.1 CDS Desal_2711 NC_012881.1 2977441 2978343 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dal:Dalk_4375 protein of unknown function DUF6 transmembrane; hypothetical protein 2977441..2978343 Desulfovibrio salexigens DSM 2638 8093866 YP_002992305.1 CDS Desal_2712 NC_012881.1 2978404 2981583 D PFAM: UvrD/REP helicase; KEGG: dde:Dde_1588 ATP-dependent DNA helicase UvrD; exodeoxyribonuclease V 2978404..2981583 Desulfovibrio salexigens DSM 2638 8093867 YP_002992306.1 CDS Desal_2713 NC_012881.1 2981586 2984489 D KEGG: dde:Dde_1587 hypothetical protein; hypothetical protein 2981586..2984489 Desulfovibrio salexigens DSM 2638 8093868 YP_002992307.1 CDS Desal_2714 NC_012881.1 2984574 2985764 D PFAM: FAD dependent oxidoreductase; KEGG: gbm:Gbem_2022 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2984574..2985764 Desulfovibrio salexigens DSM 2638 8093869 YP_002992308.1 CDS Desal_2715 NC_012881.1 2986015 2987094 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: dde:Dde_1586 2-nitropropane dioxygenase family oxidoreductase; 2-nitropropane dioxygenase 2986015..2987094 Desulfovibrio salexigens DSM 2638 8093870 YP_002992309.1 CDS Desal_2716 NC_012881.1 2987171 2987698 R KEGG: HSP70G; ER-located HSP110/SSE-like protein; hypothetical protein complement(2987171..2987698) Desulfovibrio salexigens DSM 2638 8093871 YP_002992310.1 CDS Desal_2717 NC_012881.1 2987757 2988716 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dde:Dde_1585 site-specific recombinase XerD-like; integrase family protein complement(2987757..2988716) Desulfovibrio salexigens DSM 2638 8093872 YP_002992311.1 CDS Desal_2718 NC_012881.1 2988688 2989680 R PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; KEGG: dde:Dde_1584 response regulator receiver modulated diguanylate cyclase; response regulator receiver modulated diguanylate cyclase complement(2988688..2989680) Desulfovibrio salexigens DSM 2638 8093873 YP_002992312.1 CDS Desal_2719 NC_012881.1 2989745 2990584 R TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; KEGG: dde:Dde_1583 signal transduction protein; signal transduction protein complement(2989745..2990584) Desulfovibrio salexigens DSM 2638 8093874 YP_002992313.1 CDS Desal_2720 NC_012881.1 2990585 2990995 R KEGG: dvm:DvMF_0770 hypothetical protein; hypothetical protein complement(2990585..2990995) Desulfovibrio salexigens DSM 2638 8093875 YP_002992314.1 CDS Desal_2721 NC_012881.1 2991040 2992248 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: dde:Dde_1581 DNA processing protein DprA; DNA protecting protein DprA complement(2991040..2992248) Desulfovibrio salexigens DSM 2638 8093876 YP_002992315.1 CDS Desal_2722 NC_012881.1 2992270 2993121 R TIGRFAM: tol-pal system protein YbgF; KEGG: dde:Dde_1580 TPR domain-containing protein; tol-pal system protein YbgF complement(2992270..2993121) Desulfovibrio salexigens DSM 2638 8093877 YP_002992316.1 CDS Desal_2723 NC_012881.1 2993329 2994306 D KEGG: dde:Dde_1579 hypothetical protein; hypothetical protein 2993329..2994306 Desulfovibrio salexigens DSM 2638 8093878 YP_002992317.1 CDS Desal_2724 NC_012881.1 2994431 2997448 R PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain protein; KEGG: dde:Dde_1577 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase complement(2994431..2997448) Desulfovibrio salexigens DSM 2638 8093879 YP_002992318.1 CDS Desal_2725 NC_012881.1 2997536 2997904 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvm:DvMF_0775 response regulator receiver protein; response regulator receiver protein complement(2997536..2997904) Desulfovibrio salexigens DSM 2638 8093880 YP_002992319.1 CDS Desal_2726 NC_012881.1 2997897 2998595 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: dde:Dde_1575 CheW protein; CheW protein complement(2997897..2998595) Desulfovibrio salexigens DSM 2638 8093881 YP_002992320.1 CDS Desal_2727 NC_012881.1 2998582 2999400 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: dvl:Dvul_1153 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase complement(2998582..2999400) Desulfovibrio salexigens DSM 2638 8093882 YP_002992321.1 CDS Desal_2728 NC_012881.1 2999442 3000320 R KEGG: dde:Dde_1573 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR complement(2999442..3000320) Desulfovibrio salexigens DSM 2638 8093883 YP_002992322.1 CDS Desal_2729 NC_012881.1 3000321 3002249 R PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: dvm:DvMF_0779 PBS lyase heat domain protein repeat-containing protein; PBS lyase HEAT domain-containing protein repeat-containing protein complement(3000321..3002249) Desulfovibrio salexigens DSM 2638 8093884 YP_002992323.1 CDS Desal_2730 NC_012881.1 3002310 3003359 R KEGG: dvl:Dvul_1150 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase complement(3002310..3003359) Desulfovibrio salexigens DSM 2638 8093885 YP_002992324.1 CDS Desal_2731 NC_012881.1 3003904 3004782 R KEGG: geo:Geob_2863 hypothetical protein; hypothetical protein complement(3003904..3004782) Desulfovibrio salexigens DSM 2638 8093887 YP_002992325.1 CDS Desal_2732 NC_012881.1 3004784 3007915 R KEGG: ecw:EcE24377A_0289 HsdR family type I site-specific deoxyribonuclease; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; HsdR family type I site-specific deoxyribonuclease complement(3004784..3007915) Desulfovibrio salexigens DSM 2638 8093888 YP_002992326.1 CDS Desal_2733 NC_012881.1 3007915 3009162 R PFAM: FRG domain protein; KEGG: rle:pRL110100 hypothetical protein; FRG domain-containing protein complement(3007915..3009162) Desulfovibrio salexigens DSM 2638 8093889 YP_002992327.1 CDS Desal_2734 NC_012881.1 3009162 3010409 R PFAM: restriction modification system DNA specificity domain; KEGG: rfr:Rfer_0030 restriction modification system DNA specificity subunit; restriction modification system DNA specificity domain-containing protein complement(3009162..3010409) Desulfovibrio salexigens DSM 2638 8093890 YP_002992328.1 CDS Desal_2735 NC_012881.1 3010402 3012048 R PFAM: N-6 DNA methylase; KEGG: neu:NE0385 site-specific DNA-methyltransferase, type I modification; site-specific DNA-methyltransferase (adenine-specific) complement(3010402..3012048) Desulfovibrio salexigens DSM 2638 8093891 YP_002992329.1 CDS Desal_2736 NC_012881.1 3012484 3013557 D KEGG: ajs:Ajs_3614 phage integrase family protein; hypothetical protein 3012484..3013557 Desulfovibrio salexigens DSM 2638 8093892 YP_002992330.1 CDS Desal_2737 NC_012881.1 3013864 3016056 D PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; RNA binding S1 domain protein; KEGG: cti:RALTA_A1292 sensor hybrid histidine kinase; response regulator receiver sensor signal transduction histidine kinase 3013864..3016056 Desulfovibrio salexigens DSM 2638 8093893 YP_002992331.1 CDS Desal_2738 NC_012881.1 3016067 3018538 D PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: amc:MADE_00426 two-component system sensor kinase/response regulator fusion protein; ATP-binding region ATPase domain-containing protein 3016067..3018538 Desulfovibrio salexigens DSM 2638 8093894 YP_002992332.1 CDS Desal_2739 NC_012881.1 3018499 3018969 D KEGG: hypothetical protein; response regulator receiver protein 3018499..3018969 Desulfovibrio salexigens DSM 2638 8093895 YP_002992333.1 CDS Desal_2740 NC_012881.1 3018966 3019700 D hypothetical protein 3018966..3019700 Desulfovibrio salexigens DSM 2638 8093896 YP_002992334.1 CDS Desal_2741 NC_012881.1 3020012 3020446 R KEGG: dol:Dole_0415 filamentation induced by cAMP protein Fic; hypothetical protein complement(3020012..3020446) Desulfovibrio salexigens DSM 2638 8093897 YP_002992335.1 CDS Desal_2742 NC_012881.1 3020761 3021672 R hypothetical protein complement(3020761..3021672) Desulfovibrio salexigens DSM 2638 8093898 YP_002992336.1 CDS Desal_2743 NC_012881.1 3021675 3021899 R KEGG: bja:bll0052 hypothetical protein; hypothetical protein complement(3021675..3021899) Desulfovibrio salexigens DSM 2638 8093899 YP_002992337.1 CDS Desal_2744 NC_012881.1 3022067 3022795 R hypothetical protein complement(3022067..3022795) Desulfovibrio salexigens DSM 2638 8093900 YP_002992338.1 CDS Desal_2745 NC_012881.1 3022825 3023970 R PFAM: integrase family protein; KEGG: dal:Dalk_4784 integrase family protein; integrase family protein complement(3022825..3023970) Desulfovibrio salexigens DSM 2638 8093901 YP_002992339.1 CDS Desal_2746 NC_012881.1 3024312 3025997 R PFAM: KAP P-loop domain protein; KEGG: ccv:CCV52592_0416 hypothetical protein; KAP P-loop domain-containing protein complement(3024312..3025997) Desulfovibrio salexigens DSM 2638 8093902 YP_002992340.1 CDS Desal_2747 NC_012881.1 3026010 3027107 R PFAM: protein of unknown function UPF0118; KEGG: azo:azo3137 hypothetical protein; hypothetical protein complement(3026010..3027107) Desulfovibrio salexigens DSM 2638 8093903 YP_002992341.1 CDS Desal_2749 NC_012881.1 3028201 3029307 R KEGG: dat:HRM2_46930 hypothetical protein; hypothetical protein complement(3028201..3029307) Desulfovibrio salexigens DSM 2638 8094006 YP_002992342.1 CDS Desal_2750 NC_012881.1 3029386 3029907 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: dvm:DvMF_0594 intracellular protease, PfpI family; Pfpi family intracellular protease complement(3029386..3029907) Desulfovibrio salexigens DSM 2638 8094007 YP_002992343.1 CDS Desal_2751 NC_012881.1 3030044 3030454 R PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: aha:AHA_0294 rhodanese domain-containing protein; rhodanese domain protein complement(3030044..3030454) Desulfovibrio salexigens DSM 2638 8094008 YP_002992344.1 CDS Desal_2752 NC_012881.1 3030615 3031202 D PFAM: regulatory protein TetR; KEGG: spc:Sputcn32_3687 TetR family transcriptional regulator; TetR family transcriptional regulator 3030615..3031202 Desulfovibrio salexigens DSM 2638 8094009 YP_002992345.1 CDS Desal_2753 NC_012881.1 3031265 3032029 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_0985 ABC transporter protein; ABC transporter complement(3031265..3032029) Desulfovibrio salexigens DSM 2638 8094010 YP_002992346.1 CDS Desal_2754 NC_012881.1 3032030 3033064 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gbm:Gbem_0984 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease complement(3032030..3033064) Desulfovibrio salexigens DSM 2638 8094011 YP_002992347.1 CDS Desal_2755 NC_012881.1 3033068 3033856 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: gbm:Gbem_0983 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(3033068..3033856) Desulfovibrio salexigens DSM 2638 8094012 YP_002992348.1 CDS Desal_2756 NC_012881.1 3034326 3034748 D PFAM: heat shock protein Hsp20; CS; KEGG: dvm:DvMF_0311 heat shock protein HSP20; heat shock protein Hsp20 3034326..3034748 Desulfovibrio salexigens DSM 2638 8094013 YP_002992349.1 CDS Desal_2757 NC_012881.1 3034768 3037263 D PFAM: peptidase S16 lon domain protein; KEGG: dde:Dde_2007 ATP-dependent protease; peptidase S16 lon domain-containing protein 3034768..3037263 Desulfovibrio salexigens DSM 2638 8094014 YP_002992350.1 CDS Desal_2758 NC_012881.1 3037345 3039510 R PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dds:Ddes_0301 methyl-accepting chemotaxis sensory transducer with cache sensor; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(3037345..3039510) Desulfovibrio salexigens DSM 2638 8094015 YP_002992351.1 CDS Desal_2759 NC_012881.1 3039720 3040826 R KEGG: pca:Pcar_0523 acyltransferase family protein; acyltransferase family protein complement(3039720..3040826) Desulfovibrio salexigens DSM 2638 8094016 YP_002992352.1 CDS Desal_2760 NC_012881.1 3040981 3043122 R PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dds:Ddes_0301 methyl-accepting chemotaxis sensory transducer with cache sensor; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(3040981..3043122) Desulfovibrio salexigens DSM 2638 8094017 YP_002992353.1 CDS Desal_2761 NC_012881.1 3043371 3044090 D PFAM: purine or other phosphorylase family 1; KEGG: pca:Pcar_2078 nucleoside phosphorylase; purine or other phosphorylase family 1 3043371..3044090 Desulfovibrio salexigens DSM 2638 8094018 YP_002992354.1 CDS Desal_2762 NC_012881.1 3044141 3045157 R KEGG: noc:Noc_1745 oxidoreductase; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; hopanoid biosynthesis associated radical SAM protein HpnH complement(3044141..3045157) Desulfovibrio salexigens DSM 2638 8094019 YP_002992355.1 CDS Desal_2763 NC_012881.1 3045197 3045916 R KEGG: pca:Pcar_2080 hypothetical protein; hypothetical protein complement(3045197..3045916) Desulfovibrio salexigens DSM 2638 8094020 YP_002992356.1 CDS Desal_2764 NC_012881.1 3045916 3046695 R KEGG: pca:Pcar_2081 hypothetical protein; hypothetical protein complement(3045916..3046695) Desulfovibrio salexigens DSM 2638 8094021 YP_002992357.1 CDS Desal_2765 NC_012881.1 3046699 3049383 R KEGG: pca:Pcar_2082 RND superfamily exporter; RND superfamily exporter complement(3046699..3049383) Desulfovibrio salexigens DSM 2638 8094022 YP_002992358.1 CDS Desal_2766 NC_012881.1 3049523 3050905 R PFAM: aminotransferase class-III; KEGG: pca:Pcar_2083 ornithine/acetylornithine aminotransferase; class III aminotransferase complement(3049523..3050905) Desulfovibrio salexigens DSM 2638 8094023 YP_002992359.1 CDS Desal_2767 NC_012881.1 3051108 3051956 D KEGG: dde:Dde_0390 hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 3051108..3051956 Desulfovibrio salexigens DSM 2638 8094024 YP_002992360.1 CDS Desal_2768 NC_012881.1 3052026 3055109 R PFAM: acriflavin resistance protein; KEGG: hch:HCH_05601 cation/multidrug efflux pump; acriflavin resistance protein complement(3052026..3055109) Desulfovibrio salexigens DSM 2638 8094025 YP_002992361.1 CDS Desal_2769 NC_012881.1 3055106 3056185 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pca:Pcar_3002 membrane-fusion protein, component of multidrug efflux system; RND family efflux transporter MFP subunit complement(3055106..3056185) Desulfovibrio salexigens DSM 2638 8094026 YP_002992362.1 CDS Desal_2770 NC_012881.1 3056198 3056863 R PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: yen:YE2890 DNA-binding transcriptional regulator; TetR family transcriptional regulator complement(3056198..3056863) Desulfovibrio salexigens DSM 2638 8094027 YP_002992363.1 CDS Desal_2771 NC_012881.1 3057109 3057639 D PFAM: isochorismatase hydrolase; KEGG: aha:AHA_0970 isochorismatase family protein; isochorismatase hydrolase 3057109..3057639 Desulfovibrio salexigens DSM 2638 8094028 YP_002992364.1 CDS Desal_2772 NC_012881.1 3057701 3059872 R KEGG: dde:Dde_1569 metal dependent phosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(3057701..3059872) Desulfovibrio salexigens DSM 2638 8094029 YP_002992365.1 CDS Desal_2773 NC_012881.1 3059875 3061539 R PFAM: extracellular solute-binding protein family 5; KEGG: dvl:Dvul_1145 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(3059875..3061539) Desulfovibrio salexigens DSM 2638 8094030 YP_002992366.1 CDS Desal_2774 NC_012881.1 3061783 3064992 D PFAM: SNF2-related protein; zinc finger SWIM domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dde:Dde_1564 DEAD/DEAH box helicase-like; SNF2-related protein 3061783..3064992 Desulfovibrio salexigens DSM 2638 8094031 YP_002992367.1 CDS Desal_2775 NC_012881.1 3065097 3065768 D PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 3065097..3065768 Desulfovibrio salexigens DSM 2638 8094032 YP_002992368.1 CDS Desal_2776 NC_012881.1 3065898 3066200 D hypothetical protein 3065898..3066200 Desulfovibrio salexigens DSM 2638 8094033 YP_002992369.1 CDS Desal_2777 NC_012881.1 3066526 3067020 D hypothetical protein 3066526..3067020 Desulfovibrio salexigens DSM 2638 8094034 YP_002992370.1 CDS Desal_2778 NC_012881.1 3067063 3067596 D hypothetical protein 3067063..3067596 Desulfovibrio salexigens DSM 2638 8094035 YP_002992371.1 CDS Desal_2779 NC_012881.1 3067673 3068233 R PFAM: flavin reductase domain protein FMN-binding; KEGG: dvm:DvMF_1524 flavin reductase domain protein FMN-binding; flavin reductase domain-containing protein FMN-binding complement(3067673..3068233) Desulfovibrio salexigens DSM 2638 8094036 YP_002992372.1 CDS Desal_2780 NC_012881.1 3068302 3069138 R PFAM: zinc/iron permease; KEGG: dde:Dde_3555 zinc transporter ZupT; zinc transporter ZupT complement(3068302..3069138) Desulfovibrio salexigens DSM 2638 8094037 YP_002992373.1 CDS Desal_2781 NC_012881.1 3069148 3069951 R hypothetical protein complement(3069148..3069951) Desulfovibrio salexigens DSM 2638 8094038 YP_002992374.1 CDS Desal_2782 NC_012881.1 3069952 3071937 R PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; KEGG: dat:HRM2_13910 proton/hydrogen exchanger family protein; sodium/hydrogen exchanger complement(3069952..3071937) Desulfovibrio salexigens DSM 2638 8094039 YP_002992375.1 CDS Desal_2783 NC_012881.1 3071940 3072287 R KEGG: dvl:Dvul_2687 TraR/DksA family transcriptional regulator; TraR/DksA family transcriptional regulator complement(3071940..3072287) Desulfovibrio salexigens DSM 2638 8094040 YP_002992376.1 CDS Desal_2784 NC_012881.1 3072412 3074733 R PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dvm:DvMF_0127 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(3072412..3074733) Desulfovibrio salexigens DSM 2638 8094041 YP_002992377.1 CDS Desal_2785 NC_012881.1 3074970 3076652 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 3074970..3076652 Desulfovibrio salexigens DSM 2638 8094042 YP_002992378.1 CDS Desal_2786 NC_012881.1 3076694 3077845 R KEGG: ilo:IL0298 signal protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3076694..3077845) Desulfovibrio salexigens DSM 2638 8094043 YP_002992379.1 CDS Desal_2787 NC_012881.1 3078002 3078622 R hypothetical protein complement(3078002..3078622) Desulfovibrio salexigens DSM 2638 8094044 YP_002992380.1 CDS Desal_2788 NC_012881.1 3078636 3079388 R PFAM: extracellular solute-binding protein family 3; KEGG: hch:HCH_02210 amino acid ABC transporter periplasmic protein; family 3 extracellular solute-binding protein complement(3078636..3079388) Desulfovibrio salexigens DSM 2638 8094045 YP_002992381.1 CDS Desal_2789 NC_012881.1 3079824 3081701 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dde:Dde_1077 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3079824..3081701) Desulfovibrio salexigens DSM 2638 8094046 YP_002992382.1 CDS Desal_2791 NC_012881.1 3083174 3085078 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(3083174..3085078) Desulfovibrio salexigens DSM 2638 8094048 YP_002992383.1 CDS Desal_2792 NC_012881.1 3085159 3086607 R TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; KEGG: dvm:DvMF_0841 glycogen/starch synthase, ADP-glucose type; glycogen/starch synthase complement(3085159..3086607) Desulfovibrio salexigens DSM 2638 8094049 YP_002992384.1 CDS Desal_2793 NC_012881.1 3086640 3087116 R PFAM: NUDIX hydrolase; KEGG: dde:Dde_2287 MutT/NUDIX family protein; NUDIX hydrolase complement(3086640..3087116) Desulfovibrio salexigens DSM 2638 8094050 YP_002992385.1 CDS Desal_2794 NC_012881.1 3087777 3088103 D hypothetical protein 3087777..3088103 Desulfovibrio salexigens DSM 2638 8094051 YP_002992386.1 CDS Desal_2795 NC_012881.1 3088817 3089425 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: dde:Dde_2289 translation factor SUA5; Sua5/YciO/YrdC/YwlC family protein complement(3088817..3089425) Desulfovibrio salexigens DSM 2638 8094052 YP_002992387.1 CDS Desal_2796 NC_012881.1 3089628 3091301 D PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_3143 glycosyl transferase family 2; family 2 glycosyl transferase 3089628..3091301 Desulfovibrio salexigens DSM 2638 8094053 YP_002992388.1 CDS Desal_2797 NC_012881.1 3091320 3091910 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dvl:Dvul_0906 tRNA guanosine-2'-O-methyltransferase; tRNA guanosine-2'-O-methyltransferase complement(3091320..3091910) Desulfovibrio salexigens DSM 2638 8094054 YP_002992389.1 CDS Desal_2798 NC_012881.1 3092066 3092461 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gme:Gmet_2431 response regulator receiver domain-containing protein; response regulator receiver protein 3092066..3092461 Desulfovibrio salexigens DSM 2638 8094055 YP_002992390.1 CDS Desal_2799 NC_012881.1 3092489 3093226 D SMART: Hpt domain protein; KEGG: cjd:JJD26997_1687 chemotaxis protein CheA; CheA signal transduction histidine kinase 3092489..3093226 Desulfovibrio salexigens DSM 2638 8094056 YP_002992391.1 CDS Desal_2800 NC_012881.1 3093232 3095004 D KEGG: sat:SYN_00963 chemotaxis protein; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; SMART: ATP-binding region ATPase domain protein; CheW domain protein; CheA signal transduction histidine kinase 3093232..3095004 Desulfovibrio salexigens DSM 2638 8094057 YP_002992392.1 CDS Desal_2801 NC_012881.1 3095171 3095932 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dvl:Dvul_2131 extracellular solute-binding protein; family 3 extracellular solute-binding protein 3095171..3095932 Desulfovibrio salexigens DSM 2638 8094058 YP_002992393.1 CDS Desal_2802 NC_012881.1 3096043 3096840 D PFAM: anaerobic cobalt chelatase; KEGG: dal:Dalk_0440 anaerobic cobalt chelatase; anaerobic cobalt chelatase 3096043..3096840 Desulfovibrio salexigens DSM 2638 8094059 YP_002992394.1 CDS Desal_2803 NC_012881.1 3096931 3098490 D KEGG: dde:Dde_2711 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein 3096931..3098490 Desulfovibrio salexigens DSM 2638 8094060 YP_002992395.1 CDS Desal_2804 NC_012881.1 3098480 3099721 D PFAM: ribosomal small subunit Rsm22; KEGG: dvm:DvMF_1399 ribosomal small subunit Rsm22; ribosomal small subunit Rsm22 3098480..3099721 Desulfovibrio salexigens DSM 2638 8094061 YP_002992396.1 CDS Desal_2805 NC_012881.1 3099832 3100476 D KEGG: dde:Dde_2713 lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 3099832..3100476 Desulfovibrio salexigens DSM 2638 8094062 YP_002992397.1 CDS Desal_2806 NC_012881.1 3100418 3101293 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3100418..3101293 Desulfovibrio salexigens DSM 2638 8094063 YP_002992398.1 CDS Desal_2807 NC_012881.1 3101606 3102820 D KEGG: dvl:Dvul_2652 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; response regulator receiver modulated metal dependent phosphohydrolase 3101606..3102820 Desulfovibrio salexigens DSM 2638 8094064 YP_002992399.1 CDS Desal_2808 NC_012881.1 3102810 3103934 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sat:SYN_01373 hydrogenase transcriptional regulatory protein; response regulator receiver protein 3102810..3103934 Desulfovibrio salexigens DSM 2638 8094065 YP_002992400.1 CDS Desal_2809 NC_012881.1 3103998 3105968 D KEGG: sat:SYN_01374 sensory transduction protein kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3103998..3105968 Desulfovibrio salexigens DSM 2638 8094066 YP_002992401.1 CDS Desal_2810 NC_012881.1 3106034 3106753 R KEGG: mpt:Mpe_A2803 ABC-type Co2+ transport system, periplasmic component; cobalt ABC transporter periplasmic protein complement(3106034..3106753) Desulfovibrio salexigens DSM 2638 8094067 YP_002992402.1 CDS Desal_2811 NC_012881.1 3106996 3107508 D PFAM: protein of unknown function DUF785; KEGG: neu:NE0295 hypothetical protein; hypothetical protein 3106996..3107508 Desulfovibrio salexigens DSM 2638 8094068 YP_002992403.1 CDS Desal_2812 NC_012881.1 3107550 3109115 D KEGG: noc:Noc_1083 hypothetical protein; hypothetical protein 3107550..3109115 Desulfovibrio salexigens DSM 2638 8094069 YP_002992404.1 CDS Desal_2813 NC_012881.1 3109117 3110055 D TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: tgr:Tgr7_2937 alpha-L-glutamate ligase-like protein; alpha-L-glutamate ligase-like protein 3109117..3110055 Desulfovibrio salexigens DSM 2638 8094070 YP_002992405.1 CDS Desal_2814 NC_012881.1 3110057 3110863 D hypothetical protein 3110057..3110863 Desulfovibrio salexigens DSM 2638 8094071 YP_002992406.1 CDS Desal_2815 NC_012881.1 3110954 3112687 R TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: dde:Dde_2715 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ complement(3110954..3112687) Desulfovibrio salexigens DSM 2638 8094072 YP_002992407.1 CDS Desal_2816 NC_012881.1 3112712 3113536 R PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dvl:Dvul_2082 TPR repeat-containing protein; hypothetical protein complement(3112712..3113536) Desulfovibrio salexigens DSM 2638 8094073 YP_002992408.1 CDS Desal_2817 NC_012881.1 3113549 3114241 R KEGG: dvl:Dvul_2083 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(3113549..3114241) Desulfovibrio salexigens DSM 2638 8094074 YP_002992409.1 CDS Desal_2818 NC_012881.1 3114243 3114875 R KEGG: dvl:Dvul_2084 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; guanylate kinase complement(3114243..3114875) Desulfovibrio salexigens DSM 2638 8094075 YP_002992410.1 CDS Desal_2819 NC_012881.1 3114868 3115128 R PFAM: protein of unknown function DUF370; KEGG: dvm:DvMF_1139 hypothetical protein; hypothetical protein complement(3114868..3115128) Desulfovibrio salexigens DSM 2638 8094076 YP_002992411.1 CDS Desal_2820 NC_012881.1 3115138 3116019 R PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: dde:Dde_2721 hypothetical protein; hypothetical protein complement(3115138..3116019) Desulfovibrio salexigens DSM 2638 8094077 YP_002992412.1 CDS Desal_2821 NC_012881.1 3116130 3117419 R KEGG: dde:Dde_2722 hypothetical protein; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme complement(3116130..3117419) Desulfovibrio salexigens DSM 2638 8094078 YP_002992413.1 CDS Desal_2822 NC_012881.1 3117463 3118665 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dol:Dole_2349 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase complement(3117463..3118665) Desulfovibrio salexigens DSM 2638 8094079 YP_002992414.1 CDS Desal_2823 NC_012881.1 3118759 3119748 R hypothetical protein complement(3118759..3119748) Desulfovibrio salexigens DSM 2638 8094080 YP_002992415.1 CDS Desal_2824 NC_012881.1 3120024 3120881 R KEGG: dde:Dde_1492 hypothetical protein; hypothetical protein complement(3120024..3120881) Desulfovibrio salexigens DSM 2638 8091289 YP_002992416.1 CDS Desal_2825 NC_012881.1 3121115 3122056 D hypothetical protein 3121115..3122056 Desulfovibrio salexigens DSM 2638 8093334 YP_002992417.1 CDS Desal_2826 NC_012881.1 3122266 3122619 R KEGG: dde:Dde_0563 hypothetical protein; hypothetical protein complement(3122266..3122619) Desulfovibrio salexigens DSM 2638 8093335 YP_002992418.1 CDS Desal_2827 NC_012881.1 3122625 3123230 R KEGG: dde:Dde_0564 hypothetical protein; hypothetical protein complement(3122625..3123230) Desulfovibrio salexigens DSM 2638 8093336 YP_002992419.1 CDS Desal_2828 NC_012881.1 3123313 3124860 R PFAM: glycosyl transferase family 9; KEGG: dvl:Dvul_2523 glycosyl transferase family protein; glycosyl transferase family protein complement(3123313..3124860) Desulfovibrio salexigens DSM 2638 8093337 YP_002992420.1 CDS Desal_2829 NC_012881.1 3125212 3127197 D TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: dde:Dde_3207 acetyl-coenzyme A synthetase; acetate/CoA ligase 3125212..3127197 Desulfovibrio salexigens DSM 2638 8093338 YP_002992421.1 CDS Desal_2830 NC_012881.1 3127463 3128320 D PFAM: pirin; KEGG: dps:DP1287 pirin; pirin 3127463..3128320 Desulfovibrio salexigens DSM 2638 8093339 YP_002992422.1 CDS Desal_2831 NC_012881.1 3128322 3128948 D PFAM: nitroreductase; KEGG: dps:DP2706 nitroreductase; nitroreductase 3128322..3128948 Desulfovibrio salexigens DSM 2638 8093340 YP_002992423.1 CDS Desal_2832 NC_012881.1 3129167 3130447 D PFAM: major facilitator superfamily MFS_1; KEGG: sat:SYN_02140 oxalate/formate antiporter; major facilitator superfamily protein 3129167..3130447 Desulfovibrio salexigens DSM 2638 8093341 YP_002992424.1 CDS Desal_2833 NC_012881.1 3130639 3131208 D KEGG: dde:Dde_3701 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 3130639..3131208 Desulfovibrio salexigens DSM 2638 8093342 YP_002992425.1 CDS Desal_2834 NC_012881.1 3131420 3131770 D KEGG: dde:Dde_1702 hypothetical protein; hypothetical protein 3131420..3131770 Desulfovibrio salexigens DSM 2638 8093343 YP_002992426.1 CDS Desal_2835 NC_012881.1 3131869 3134382 D PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dde:Dde_1701 elongator protein 3/MiaB/NifB; radical SAM domain protein 3131869..3134382 Desulfovibrio salexigens DSM 2638 8093344 YP_002992427.1 CDS Desal_2836 NC_012881.1 3134510 3135643 R KEGG: rec:RHECIAT_CH0001706 two-component response regulator protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3134510..3135643) Desulfovibrio salexigens DSM 2638 8093345 YP_002992428.1 CDS Desal_2837 NC_012881.1 3135950 3137335 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: geo:Geob_3792 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(3135950..3137335) Desulfovibrio salexigens DSM 2638 8093346 YP_002992429.1 CDS Desal_2838 NC_012881.1 3137780 3138334 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dds:Ddes_0455 single-strand binding protein; single-strand binding protein complement(3137780..3138334) Desulfovibrio salexigens DSM 2638 8093347 YP_002992430.1 CDS Desal_2839 NC_012881.1 3138347 3138700 R KEGG: lip:LI0491 hypothetical protein; hypothetical protein complement(3138347..3138700) Desulfovibrio salexigens DSM 2638 8093348 YP_002992431.1 CDS Desal_2840 NC_012881.1 3138773 3139423 R KEGG: dvl:Dvul_1017 hypothetical protein; hypothetical protein complement(3138773..3139423) Desulfovibrio salexigens DSM 2638 8093349 YP_002992432.1 CDS Desal_2841 NC_012881.1 3139625 3141877 R PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: dvm:DvMF_0816 acetyl-CoA carboxylase; acetyl-CoA carboxylase complement(3139625..3141877) Desulfovibrio salexigens DSM 2638 8093350 YP_002992433.1 CDS Desal_2842 NC_012881.1 3141908 3143326 R PFAM: carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthase L chain ATP-binding; KEGG: dds:Ddes_0460 pyruvate carboxylase; pyruvate carboxylase complement(3141908..3143326) Desulfovibrio salexigens DSM 2638 8093351 YP_002992434.1 CDS Desal_2843 NC_012881.1 3143348 3143713 R PFAM: type IV pilus assembly PilZ; KEGG: dde:Dde_1540 hypothetical protein; type IV pilus assembly protein PilZ complement(3143348..3143713) Desulfovibrio salexigens DSM 2638 8093352 YP_002992435.1 CDS Desal_2844 NC_012881.1 3143848 3144600 R PFAM: OmpA/MotB domain protein; KEGG: dvl:Dvul_1013 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein complement(3143848..3144600) Desulfovibrio salexigens DSM 2638 8093353 YP_002992436.1 CDS Desal_2845 NC_012881.1 3144604 3145356 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: dvl:Dvul_1012 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(3144604..3145356) Desulfovibrio salexigens DSM 2638 8093354 YP_002992437.1 CDS Desal_2846 NC_012881.1 3145467 3146294 D TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; KEGG: dvu:DVU2230 purine nucleoside phosphorylase; inosine guanosine and xanthosine phosphorylase family protein 3145467..3146294 Desulfovibrio salexigens DSM 2638 8093355 YP_002992438.1 CDS Desal_2847 NC_012881.1 3146480 3147160 D KEGG: dal:Dalk_0240 hypothetical protein; hypothetical protein 3146480..3147160 Desulfovibrio salexigens DSM 2638 8093356 YP_002992439.1 CDS Desal_2848 NC_012881.1 3147330 3148145 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP2828 hypothetical protein; 4Fe-4S ferredoxin complement(3147330..3148145) Desulfovibrio salexigens DSM 2638 8093357 YP_002992440.1 CDS Desal_2849 NC_012881.1 3148499 3150100 R catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase complement(3148499..3150100) Desulfovibrio salexigens DSM 2638 8093358 YP_002992441.1 CDS Desal_2850 NC_012881.1 3150361 3150552 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU3449 ferredoxin family protein; 4Fe-4S ferredoxin complement(3150361..3150552) Desulfovibrio salexigens DSM 2638 8093359 YP_002992442.1 CDS Desal_2851 NC_012881.1 3150717 3152024 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2389 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin complement(3150717..3152024) Desulfovibrio salexigens DSM 2638 8093360 YP_002992443.1 CDS Desal_2852 NC_012881.1 3152046 3152669 R PFAM: nitrite and sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2390 dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits-like; nitrite and sulfite reductase 4Fe-4S domain-containing protein complement(3152046..3152669) Desulfovibrio salexigens DSM 2638 8093361 YP_002992444.1 CDS Desal_2853 NC_012881.1 3152780 3153460 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: sfu:Sfum_3445 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 3152780..3153460 Desulfovibrio salexigens DSM 2638 8093362 YP_002992445.1 CDS Desal_2854 NC_012881.1 3153457 3154461 R PFAM: response regulator receiver; CheW domain protein; SMART: response regulator receiver; CheW domain protein; KEGG: dvm:DvMF_2021 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein complement(3153457..3154461) Desulfovibrio salexigens DSM 2638 8093363 YP_002992446.1 CDS Desal_2855 NC_012881.1 3154585 3155994 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: hypothetical protein; KEGG: bxe:Bxe_A3016 TPR/sulfotransferase domain-containing protein; hypothetical protein complement(3154585..3155994) Desulfovibrio salexigens DSM 2638 8093364 YP_002992447.1 CDS Desal_2856 NC_012881.1 3155991 3157283 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mmw:Mmwyl1_2823 HlyD family type I secretion membrane fusion protein; HlyD family type I secretion membrane fusion protein complement(3155991..3157283) Desulfovibrio salexigens DSM 2638 8093365 YP_002992448.1 CDS Desal_2857 NC_012881.1 3157280 3158980 R PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bbr:BB1189 ABC transporter; ABC transporter complement(3157280..3158980) Desulfovibrio salexigens DSM 2638 8093366 YP_002992449.1 CDS Desal_2858 NC_012881.1 3159092 3160435 R PFAM: outer membrane efflux protein; KEGG: asa:ASA_1671 type I secretion outer membrane protein, TolC; outer membrane efflux protein complement(3159092..3160435) Desulfovibrio salexigens DSM 2638 8093367 YP_002992450.1 CDS Desal_2859 NC_012881.1 3160611 3162968 D PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: dol:Dole_0034 TPR repeat-containing adenylate/guanylate cyclase; adenylate/guanylate cyclase with Chase sensor 3160611..3162968 Desulfovibrio salexigens DSM 2638 8093368 YP_002992451.1 CDS Desal_2860 NC_012881.1 3163065 3164294 D KEGG: tcx:Tcr_1005 hypothetical protein; hypothetical protein 3163065..3164294 Desulfovibrio salexigens DSM 2638 8093369 YP_002992452.1 CDS Desal_2861 NC_012881.1 3164287 3164724 D KEGG: tcx:Tcr_1004 hypothetical protein; hypothetical protein 3164287..3164724 Desulfovibrio salexigens DSM 2638 8093370 YP_002992453.1 CDS Desal_2862 NC_012881.1 3164987 3167281 R TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Cysteinyl-tRNA synthetase class Ia; KEGG: dal:Dalk_3820 cysteine synthase; cysteine synthase complement(3164987..3167281) Desulfovibrio salexigens DSM 2638 8093371 YP_002992454.1 CDS Desal_2863 NC_012881.1 3167459 3169222 D PFAM: protein of unknown function DUF115; KEGG: dde:Dde_2415 hypothetical protein; hypothetical protein 3167459..3169222 Desulfovibrio salexigens DSM 2638 8093372 YP_002992455.1 CDS Desal_2864 NC_012881.1 3169329 3170621 R KEGG: hypothetical protein; hypothetical protein complement(3169329..3170621) Desulfovibrio salexigens DSM 2638 8093373 YP_002992456.1 CDS Desal_2865 NC_012881.1 3170817 3171044 D hypothetical protein 3170817..3171044 Desulfovibrio salexigens DSM 2638 8093374 YP_002992457.1 CDS Desal_2866 NC_012881.1 3171049 3171675 D PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: dvl:Dvul_1842 phosphoesterase, PA-phosphatase related; PA-phosphatase like phosphoesterase 3171049..3171675 Desulfovibrio salexigens DSM 2638 8093375 YP_002992458.1 CDS Desal_2867 NC_012881.1 3171679 3173316 D PFAM: glycosyl transferase family 39; KEGG: dde:Dde_2420 dolichyl-phosphate-mannose-protein mannosyltransferase family protein; glycosyl transferase family protein 3171679..3173316 Desulfovibrio salexigens DSM 2638 8093376 YP_002992459.1 CDS Desal_2868 NC_012881.1 3173475 3174695 D TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; response regulator receiver; metal-dependent phosphohydrolase HD sub domain; KEGG: dvu:DVU0330 response regulator; response regulator receiver modulated metal dependent phosphohydrolase 3173475..3174695 Desulfovibrio salexigens DSM 2638 8093377 YP_002992460.1 CDS Desal_2869 NC_012881.1 3174760 3176409 R KEGG: dvm:DvMF_0449 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase complement(3174760..3176409) Desulfovibrio salexigens DSM 2638 8093378 YP_002992461.1 CDS Desal_2870 NC_012881.1 3176611 3179382 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; histidine kinase HAMP region domain protein; KEGG: dde:Dde_0544 periplasmic sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 3176611..3179382 Desulfovibrio salexigens DSM 2638 8093379 YP_002992462.1 CDS Desal_2871 NC_012881.1 3179483 3179824 D KEGG: dvm:DvMF_1856 hypothetical protein; hypothetical protein 3179483..3179824 Desulfovibrio salexigens DSM 2638 8093380 YP_002992463.1 CDS Desal_2872 NC_012881.1 3179862 3182324 R KEGG: sat:SYN_00231 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(3179862..3182324) Desulfovibrio salexigens DSM 2638 8093381 YP_002992464.1 CDS Desal_2873 NC_012881.1 3182530 3184098 D KEGG: sat:SYN_01420 cytoplasmic protein; hypothetical protein 3182530..3184098 Desulfovibrio salexigens DSM 2638 8093382 YP_002992465.1 CDS Desal_2874 NC_012881.1 3184083 3184730 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_0232 ATPase; ABC transporter complement(3184083..3184730) Desulfovibrio salexigens DSM 2638 8093383 YP_002992466.1 CDS Desal_2875 NC_012881.1 3184730 3185425 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0233 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(3184730..3185425) Desulfovibrio salexigens DSM 2638 8093384 YP_002992467.1 CDS Desal_2876 NC_012881.1 3185561 3186385 R KEGG: dde:Dde_0234 ABC transporter periplasmic substrate-binding protein; ABC transporter substrate-binding protein complement(3185561..3186385) Desulfovibrio salexigens DSM 2638 8093385 YP_002992468.1 CDS Desal_2877 NC_012881.1 3186643 3187428 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: sfu:Sfum_1205 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD 3186643..3187428 Desulfovibrio salexigens DSM 2638 8093386 YP_002992469.1 CDS Desal_2878 NC_012881.1 3187624 3188565 D PFAM: formate dehydrogenase accessory protein; KEGG: dvl:Dvul_2375 formate dehydrogenase formation protein FdhE; formate dehydrogenase accessory protein 3187624..3188565 Desulfovibrio salexigens DSM 2638 8093387 YP_002992470.1 CDS Desal_2879 NC_012881.1 3188567 3189559 D KEGG: dvl:Dvul_2372 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 3188567..3189559 Desulfovibrio salexigens DSM 2638 8093388 YP_002992471.1 CDS Desal_2880 NC_012881.1 3189571 3190455 D KEGG: dvl:Dvul_2368 transposase; transposase 3189571..3190455 Desulfovibrio salexigens DSM 2638 8093389 YP_002992472.1 CDS Desal_2881 NC_012881.1 3190542 3191072 R KEGG: rsh:Rsph17029_3007 hypothetical protein; hypothetical protein complement(3190542..3191072) Desulfovibrio salexigens DSM 2638 8093390 YP_002992473.1 CDS Desal_2882 NC_012881.1 3191234 3192682 R KEGG: pca:Pcar_2449 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3191234..3192682) Desulfovibrio salexigens DSM 2638 8093391 YP_002992474.1 CDS ruvB NC_012881.1 3192769 3193752 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3192769..3193752) Desulfovibrio salexigens DSM 2638 8093392 YP_002992475.1 CDS ruvA NC_012881.1 3193780 3194391 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(3193780..3194391) Desulfovibrio salexigens DSM 2638 8093393 YP_002992476.1 CDS ruvC NC_012881.1 3194388 3194894 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(3194388..3194894) Desulfovibrio salexigens DSM 2638 8093394 YP_002992477.1 CDS Desal_2886 NC_012881.1 3194895 3195641 R PFAM: protein of unknown function DUF28; KEGG: dde:Dde_2325 hypothetical protein; hypothetical protein complement(3194895..3195641) Desulfovibrio salexigens DSM 2638 8093395 YP_002992478.1 CDS Desal_2887 NC_012881.1 3195849 3196448 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: dvl:Dvul_0985 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ complement(3195849..3196448) Desulfovibrio salexigens DSM 2638 8093396 YP_002992479.1 CDS Desal_2888 NC_012881.1 3196558 3198039 D KEGG: dvl:Dvul_0984 hypothetical protein; hypothetical protein 3196558..3198039 Desulfovibrio salexigens DSM 2638 8093397 YP_002992480.1 CDS Desal_2889 NC_012881.1 3198209 3198772 D KEGG: dde:Dde_2000 transport-associated protein; transport-associated protein 3198209..3198772 Desulfovibrio salexigens DSM 2638 8093398 YP_002992481.1 CDS Desal_2890 NC_012881.1 3198795 3199424 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rsh:Rsph17029_4146 GntR family transcriptional regulator; GntR family transcriptional regulator complement(3198795..3199424) Desulfovibrio salexigens DSM 2638 8093399 YP_002992482.1 CDS Desal_2891 NC_012881.1 3199875 3201965 R PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dvl:Dvul_0949 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(3199875..3201965) Desulfovibrio salexigens DSM 2638 8093400 YP_002992483.1 CDS Desal_2892 NC_012881.1 3202168 3204450 R KEGG: dde:Dde_0558 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein; signal transduction histidine kinase, nitrogen specific, NtrB complement(3202168..3204450) Desulfovibrio salexigens DSM 2638 8093401 YP_002992484.1 CDS Desal_2893 NC_012881.1 3204622 3205734 D KEGG: hypothetical protein; hypothetical protein 3204622..3205734 Desulfovibrio salexigens DSM 2638 8093402 YP_002992485.1 CDS Desal_2894 NC_012881.1 3205752 3206213 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: dat:HRM2_25020 HTH-type transcriptional regulator; AsnC family transcriptional regulator complement(3205752..3206213) Desulfovibrio salexigens DSM 2638 8093403 YP_002992486.1 CDS Desal_2895 NC_012881.1 3206445 3207635 D KEGG: aha:AHA_4234 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; glycine hydroxymethyltransferase; aminotransferase class-III; 2-amino-3-ketobutyrate coenzyme A ligase 3206445..3207635 Desulfovibrio salexigens DSM 2638 8093404 YP_002992487.1 CDS Desal_2896 NC_012881.1 3207654 3208691 D TIGRFAM: L-threonine 3-dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: vcm:VCM66_A0845 threonine 3-dehydrogenase; L-threonine 3-dehydrogenase 3207654..3208691 Desulfovibrio salexigens DSM 2638 8093405 YP_002992488.1 CDS Desal_2897 NC_012881.1 3208739 3209008 R hypothetical protein complement(3208739..3209008) Desulfovibrio salexigens DSM 2638 8093406 YP_002992489.1 CDS Desal_2898 NC_012881.1 3209164 3211335 R PFAM: AsmA family protein; KEGG: tgr:Tgr7_2948 AsmA family protein; AsmA family protein complement(3209164..3211335) Desulfovibrio salexigens DSM 2638 8093407 YP_002992490.1 CDS Desal_2899 NC_012881.1 3211540 3212328 D hypothetical protein 3211540..3212328 Desulfovibrio salexigens DSM 2638 8093408 YP_002992491.1 CDS Desal_2900 NC_012881.1 3212393 3212797 R PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: lip:LI0217 transcriptional regulator; MerR family transcriptional regulator complement(3212393..3212797) Desulfovibrio salexigens DSM 2638 8093409 YP_002992492.1 CDS Desal_2901 NC_012881.1 3213470 3214075 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: gur:Gura_0466 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit complement(3213470..3214075) Desulfovibrio salexigens DSM 2638 8093411 YP_002992493.1 CDS Desal_2902 NC_012881.1 3214462 3214698 D KEGG: gur:Gura_1377 hypothetical protein; hypothetical protein 3214462..3214698 Desulfovibrio salexigens DSM 2638 8093412 YP_002992494.1 CDS Desal_2903 NC_012881.1 3214784 3215320 D KEGG: gur:Gura_0465 hypothetical protein; hypothetical protein 3214784..3215320 Desulfovibrio salexigens DSM 2638 8093413 YP_002992495.1 CDS Desal_2904 NC_012881.1 3215751 3217742 D PFAM: GCN5-related N-acetyltransferase; RimK domain protein ATP-grasp; KEGG: lpc:LPC_2964 ribosomal protein S6 modification protein; N-acetyltransferase GCN5 3215751..3217742 Desulfovibrio salexigens DSM 2638 8090741 YP_002992496.1 CDS Desal_2905 NC_012881.1 3217841 3218578 R PFAM: TraT complement resistance family protein; KEGG: tdn:Suden_0647 TraT complement resistance; TraT complement resistance family protein complement(3217841..3218578) Desulfovibrio salexigens DSM 2638 8090742 YP_002992497.1 CDS Desal_2906 NC_012881.1 3218688 3219347 D hypothetical protein 3218688..3219347 Desulfovibrio salexigens DSM 2638 8090743 YP_002992498.1 CDS Desal_2907 NC_012881.1 3219378 3220178 R KEGG: dal:Dalk_0281 hypothetical protein; hypothetical protein complement(3219378..3220178) Desulfovibrio salexigens DSM 2638 8090744 YP_002992499.1 CDS Desal_2908 NC_012881.1 3220221 3221057 R PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_001121 AraC-like ligand binding domain protein; AraC family transcriptional regulator complement(3220221..3221057) Desulfovibrio salexigens DSM 2638 8090745 YP_002992500.1 CDS Desal_2909 NC_012881.1 3221279 3223582 D PFAM: MscS Mechanosensitive ion channel; KEGG: dde:Dde_3447 mechanosensitive ion channel family protein; mechanosensitive ion channel MscS 3221279..3223582 Desulfovibrio salexigens DSM 2638 8090746 YP_002992501.1 CDS Desal_2910 NC_012881.1 3223610 3224641 D PFAM: hypothetical protein; KEGG: dal:Dalk_0015 hypothetical protein; hypothetical protein 3223610..3224641 Desulfovibrio salexigens DSM 2638 8090747 YP_002992502.1 CDS Desal_2911 NC_012881.1 3224672 3225736 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: dat:HRM2_38430 CorA2; magnesium and cobalt transport protein CorA 3224672..3225736 Desulfovibrio salexigens DSM 2638 8090748 YP_002992503.1 CDS Desal_2912 NC_012881.1 3226315 3227376 D KEGG: dat:HRM2_29300 YodO; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 3226315..3227376 Desulfovibrio salexigens DSM 2638 8090749 YP_002992504.1 CDS Desal_2913 NC_012881.1 3227607 3228893 D PFAM: sodium:dicarboxylate symporter; KEGG: dat:HRM2_45810 proton/sodium-glutamate symport protein; sodium:dicarboxylate symporter 3227607..3228893 Desulfovibrio salexigens DSM 2638 8090750 YP_002992505.1 CDS Desal_2914 NC_012881.1 3228970 3229797 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dvm:DvMF_2972 glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(3228970..3229797) Desulfovibrio salexigens DSM 2638 8090751 YP_002992506.1 CDS Desal_2915 NC_012881.1 3229807 3230586 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ppw:PputW619_0907 ABC transporter; ABC transporter complement(3229807..3230586) Desulfovibrio salexigens DSM 2638 8090752 YP_002992507.1 CDS Desal_2916 NC_012881.1 3230599 3231702 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vha:VIBHAR_02363 hypothetical protein; polar amino acid ABC transporter permease complement(3230599..3231702) Desulfovibrio salexigens DSM 2638 8090753 YP_002992508.1 CDS Desal_2917 NC_012881.1 3231705 3233084 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_3559 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter permease complement(3231705..3233084) Desulfovibrio salexigens DSM 2638 8090754 YP_002992509.1 CDS Desal_2918 NC_012881.1 3233157 3234167 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mmw:Mmwyl1_4393 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(3233157..3234167) Desulfovibrio salexigens DSM 2638 8090755 YP_002992510.1 CDS Desal_2919 NC_012881.1 3234465 3235178 D PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: spe:Spro_4489 GntR family transcriptional regulator; GntR family transcriptional regulator 3234465..3235178 Desulfovibrio salexigens DSM 2638 8090756 YP_002992511.1 CDS Desal_2920 NC_012881.1 3235250 3235624 R KEGG: hypothetical protein; hypothetical protein complement(3235250..3235624) Desulfovibrio salexigens DSM 2638 8090757 YP_002992512.1 CDS nagB NC_012881.1 3235792 3236589 D catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 3235792..3236589 Desulfovibrio salexigens DSM 2638 8090758 YP_002992513.1 CDS Desal_2922 NC_012881.1 3236690 3237328 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: lpn:lpg2158 hypothetical protein; methyltransferase type 11 3236690..3237328 Desulfovibrio salexigens DSM 2638 8090759 YP_002992514.1 CDS Desal_2923 NC_012881.1 3237553 3238995 D KEGG: dvl:Dvul_1611 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do 3237553..3238995 Desulfovibrio salexigens DSM 2638 8090760 YP_002992515.1 CDS Desal_2924 NC_012881.1 3239089 3239958 D KEGG: dvm:DvMF_0486 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3239089..3239958 Desulfovibrio salexigens DSM 2638 8090761 YP_002992516.1 CDS Desal_2925 NC_012881.1 3240110 3241054 D KEGG: dvm:DvMF_0487 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 3240110..3241054 Desulfovibrio salexigens DSM 2638 8090763 YP_002992517.1 CDS Desal_2926 NC_012881.1 3241122 3241712 D TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: dde:Dde_2127 50S ribosomal protein L25/general stress protein Ctc; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 3241122..3241712 Desulfovibrio salexigens DSM 2638 8090764 YP_002992518.1 CDS Desal_2927 NC_012881.1 3241788 3242405 D KEGG: dvm:DvMF_0489 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 3241788..3242405 Desulfovibrio salexigens DSM 2638 8090765 YP_002992519.1 CDS Desal_2928 NC_012881.1 3242623 3243138 D PFAM: transcription factor CarD; KEGG: dde:Dde_2129 CarD family transcriptional regulator; CarD family transcriptional regulator 3242623..3243138 Desulfovibrio salexigens DSM 2638 8090766 YP_002992520.1 CDS rho NC_012881.1 3243476 3244750 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3243476..3244750 Desulfovibrio salexigens DSM 2638 8090767 YP_002992521.1 CDS Desal_2930 NC_012881.1 3244973 3246367 D PFAM: peptidase M48 Ste24p; TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: dde:Dde_2122 TPR repeat-containing protein; peptidase M48 Ste24p 3244973..3246367 Desulfovibrio salexigens DSM 2638 8090768 YP_002992522.1 CDS Desal_2931 NC_012881.1 3246434 3247417 D TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: riboflavin kinase; FAD synthetase; KEGG: dvm:DvMF_1762 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 3246434..3247417 Desulfovibrio salexigens DSM 2638 8090769 YP_002992523.1 CDS Desal_2932 NC_012881.1 3247417 3249234 D PFAM: chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dde:Dde_3504 chloride channel family protein; chloride channel core 3247417..3249234 Desulfovibrio salexigens DSM 2638 8090770 YP_002992524.1 CDS Desal_2933 NC_012881.1 3249334 3250119 R KEGG: hypothetical protein; hypothetical protein complement(3249334..3250119) Desulfovibrio salexigens DSM 2638 8090771 YP_002992525.1 CDS Desal_2934 NC_012881.1 3250307 3250816 R KEGG: dde:Dde_0088 hypothetical protein; hypothetical protein complement(3250307..3250816) Desulfovibrio salexigens DSM 2638 8090772 YP_002992526.1 CDS Desal_2935 NC_012881.1 3251080 3251619 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 3251080..3251619 Desulfovibrio salexigens DSM 2638 8090773 YP_002992527.1 CDS Desal_2936 NC_012881.1 3251639 3253012 D KEGG: dde:Dde_2014 ATP-dependent protease ATP-binding subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: ATPase AAA; heat shock protein HslVU, ATPase subunit HslU 3251639..3253012 Desulfovibrio salexigens DSM 2638 8090774 YP_002992528.1 CDS Desal_2937 NC_012881.1 3253189 3253935 D PFAM: TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dvm:DvMF_1136 hypothetical protein; hypothetical protein 3253189..3253935 Desulfovibrio salexigens DSM 2638 8090775 YP_002992529.1 CDS Desal_2938 NC_012881.1 3254177 3255763 D PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: dvm:DvMF_1808 protein of unknown function DUF1078 domain protein; hypothetical protein 3254177..3255763 Desulfovibrio salexigens DSM 2638 8090776 YP_002992530.1 CDS Desal_2939 NC_012881.1 3255842 3256315 R PFAM: rubrerythrin; KEGG: dvm:DvMF_0328 hypothetical protein; rubrerythrin complement(3255842..3256315) Desulfovibrio salexigens DSM 2638 8090777 YP_002992531.1 CDS Desal_2940 NC_012881.1 3256633 3258243 D PFAM: aminotransferase class I and II; KEGG: dvm:DvMF_0908 histidinol-phosphate aminotransferase; Hpt protein 3256633..3258243 Desulfovibrio salexigens DSM 2638 8090778 YP_002992532.1 CDS Desal_2941 NC_012881.1 3258258 3258575 D hypothetical protein 3258258..3258575 Desulfovibrio salexigens DSM 2638 8090779 YP_002992533.1 CDS Desal_2942 NC_012881.1 3258712 3260778 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: sat:SYN_00432 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3258712..3260778 Desulfovibrio salexigens DSM 2638 8090780 YP_002992534.1 CDS Desal_2943 NC_012881.1 3260971 3262152 D PFAM: extracellular ligand-binding receptor; KEGG: dvm:DvMF_1166 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3260971..3262152 Desulfovibrio salexigens DSM 2638 8090781 YP_002992535.1 CDS Desal_2944 NC_012881.1 3262246 3263154 D PFAM: inner-membrane translocator; KEGG: dvm:DvMF_1165 inner-membrane translocator; inner-membrane translocator 3262246..3263154 Desulfovibrio salexigens DSM 2638 8090782 YP_002992536.1 CDS Desal_2945 NC_012881.1 3263167 3264243 D PFAM: inner-membrane translocator; KEGG: dvm:DvMF_1164 inner-membrane translocator; inner-membrane translocator 3263167..3264243 Desulfovibrio salexigens DSM 2638 8090783 YP_002992537.1 CDS Desal_2946 NC_012881.1 3264270 3265037 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvl:Dvul_0565 ABC transporter; ABC transporter 3264270..3265037 Desulfovibrio salexigens DSM 2638 8090784 YP_002992538.1 CDS Desal_2947 NC_012881.1 3265037 3265771 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvm:DvMF_1162 ABC transporter; ABC transporter 3265037..3265771 Desulfovibrio salexigens DSM 2638 8090785 YP_002992539.1 CDS Desal_2948 NC_012881.1 3265953 3266420 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dat:HRM2_43150 5-nitroimidazole antibiotic resistance protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(3265953..3266420) Desulfovibrio salexigens DSM 2638 8090786 YP_002992540.1 CDS Desal_2949 NC_012881.1 3266555 3267214 R PFAM: protein of unknown function UPF0126; KEGG: rpd:RPD_3918 hypothetical protein; hypothetical protein complement(3266555..3267214) Desulfovibrio salexigens DSM 2638 8090787 YP_002992541.1 CDS Desal_2950 NC_012881.1 3267478 3268347 D TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: abo:ABO_1563 formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase 3267478..3268347 Desulfovibrio salexigens DSM 2638 8090788 YP_002992542.1 CDS Desal_2951 NC_012881.1 3268426 3270009 R KEGG: dvm:DvMF_0924 hypothetical protein; hypothetical protein complement(3268426..3270009) Desulfovibrio salexigens DSM 2638 8090789 YP_002992543.1 CDS Desal_2952 NC_012881.1 3270430 3270603 D hypothetical protein 3270430..3270603 Desulfovibrio salexigens DSM 2638 8090790 YP_002992544.1 CDS Desal_2953 NC_012881.1 3270569 3271021 R hypothetical protein complement(3270569..3271021) Desulfovibrio salexigens DSM 2638 8090791 YP_002992545.1 CDS Desal_2954 NC_012881.1 3271614 3272294 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: radical SAM domain protein; KEGG: dvm:DvMF_1818 radical SAM domain protein; anaerobic ribonucleoside-triphosphate reductase activating protein 3271614..3272294 Desulfovibrio salexigens DSM 2638 8090792 YP_002992546.1 CDS Desal_2955 NC_012881.1 3272242 3274293 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 3272242..3274293 Desulfovibrio salexigens DSM 2638 8090793 YP_002992547.1 CDS Desal_2956 NC_012881.1 3274506 3274883 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvl:Dvul_1780 response regulator receiver protein; response regulator receiver protein 3274506..3274883 Desulfovibrio salexigens DSM 2638 8090794 YP_002992548.1 CDS Desal_2957 NC_012881.1 3274949 3275827 R KEGG: rpd:RPD_1494 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR complement(3274949..3275827) Desulfovibrio salexigens DSM 2638 8090795 YP_002992549.1 CDS Desal_2958 NC_012881.1 3275817 3277073 R PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; KEGG: dvl:Dvul_2451 diguanylate phosphodiesterase; diguanylate phosphodiesterase complement(3275817..3277073) Desulfovibrio salexigens DSM 2638 8090796 YP_002992550.1 CDS argC NC_012881.1 3277180 3278232 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(3277180..3278232) Desulfovibrio salexigens DSM 2638 8090797 YP_002992551.1 CDS Desal_2960 NC_012881.1 3278348 3278650 R PFAM: Domain of unknown function DUF1844; KEGG: dds:Ddes_0803 domain of unknown function DUF1844; hypothetical protein complement(3278348..3278650) Desulfovibrio salexigens DSM 2638 8090798 YP_002992552.1 CDS Desal_2961 NC_012881.1 3278790 3281504 R KEGG: dde:Dde_3450 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: DNA-directed DNA polymerase; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease; DNA polymerase I complement(3278790..3281504) Desulfovibrio salexigens DSM 2638 8090799 YP_002992553.1 CDS Desal_2962 NC_012881.1 3281552 3282544 R PFAM: phosphoesterase RecJ domain protein; KEGG: dde:Dde_3494 DHH family protein; phosphoesterase RecJ domain-containing protein complement(3281552..3282544) Desulfovibrio salexigens DSM 2638 8090800 YP_002992554.1 CDS Desal_2963 NC_012881.1 3282547 3283053 R PFAM: cobalbumin biosynthesis protein; KEGG: dde:Dde_3495 adenosylcobinamide kinase; cobalbumin biosynthesis protein complement(3282547..3283053) Desulfovibrio salexigens DSM 2638 8090801 YP_002992555.1 CDS Desal_2964 NC_012881.1 3283154 3283915 R KEGG: dvl:Dvul_2481 hypothetical protein; hypothetical protein complement(3283154..3283915) Desulfovibrio salexigens DSM 2638 8090802 YP_002992556.1 CDS Desal_2965 NC_012881.1 3284037 3284201 D KEGG: dvl:Dvul_2482 hypothetical protein; hypothetical protein 3284037..3284201 Desulfovibrio salexigens DSM 2638 8090803 YP_002992557.1 CDS Desal_2966 NC_012881.1 3284251 3287355 R PFAM: UvrD/REP helicase; PHP domain protein; KEGG: dde:Dde_3499 ATP-dependent DNA helicase UvrD; UvrD/REP helicase complement(3284251..3287355) Desulfovibrio salexigens DSM 2638 8090804 YP_002992558.1 CDS Desal_2967 NC_012881.1 3287588 3289474 D KEGG: bbt:BBta_0546 hypothetical protein; hypothetical protein 3287588..3289474 Desulfovibrio salexigens DSM 2638 8090805 YP_002992559.1 CDS Desal_2968 NC_012881.1 3289640 3290023 R hypothetical protein complement(3289640..3290023) Desulfovibrio salexigens DSM 2638 8090806 YP_002992560.1 CDS Desal_2969 NC_012881.1 3290348 3291961 D PFAM: extracellular solute-binding protein family 5; KEGG: dde:Dde_0275 oligopeptide/dipeptide ABC transporter periplasmic oligopeptide/dipeptide-binding protein; family 5 extracellular solute-binding protein 3290348..3291961 Desulfovibrio salexigens DSM 2638 8090807 YP_002992561.1 CDS Desal_2970 NC_012881.1 3292165 3293139 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_1533 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3292165..3293139 Desulfovibrio salexigens DSM 2638 8090808 YP_002992562.1 CDS Desal_2971 NC_012881.1 3293140 3294066 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dps:DP0149 dipeptide ABC transporter permease protein (DppC); binding-protein-dependent transport system inner membrane protein 3293140..3294066 Desulfovibrio salexigens DSM 2638 8090809 YP_002992563.1 CDS Desal_2972 NC_012881.1 3294070 3295038 D KEGG: dvl:Dvul_2802 oligopeptide/dipeptide ABC transporter ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3294070..3295038 Desulfovibrio salexigens DSM 2638 8090810 YP_002992564.1 CDS Desal_2973 NC_012881.1 3295048 3296061 D KEGG: dvm:DvMF_1825 oligopeptide/dipeptide ABC transporter ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3295048..3296061 Desulfovibrio salexigens DSM 2638 8090811 YP_002992565.1 CDS Desal_2974 NC_012881.1 3296186 3296980 D PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dde:Dde_1667 TPR repeat-containing protein; hypothetical protein 3296186..3296980 Desulfovibrio salexigens DSM 2638 8090812 YP_002992566.1 CDS Desal_2975 NC_012881.1 3297143 3297877 D PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dde:Dde_1667 TPR repeat-containing protein; hypothetical protein 3297143..3297877 Desulfovibrio salexigens DSM 2638 8090813 YP_002992567.1 CDS Desal_2976 NC_012881.1 3297874 3298527 D PFAM: type IV pilus assembly PilZ; KEGG: dde:Dde_2940 hypothetical protein; type IV pilus assembly PilZ 3297874..3298527 Desulfovibrio salexigens DSM 2638 8092391 YP_002992568.1 CDS Desal_2977 NC_012881.1 3298599 3299582 R KEGG: sfu:Sfum_1825 biotin synthase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(3298599..3299582) Desulfovibrio salexigens DSM 2638 8093659 YP_002992569.1 CDS Desal_2978 NC_012881.1 3299587 3300858 R TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: dol:Dole_0679 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(3299587..3300858) Desulfovibrio salexigens DSM 2638 8093660 YP_002992570.1 CDS Desal_2979 NC_012881.1 3301058 3301750 R TIGRFAM: dethiobiotin synthase; KEGG: cvi:CV_0598 dethiobiotin synthase; dethiobiotin synthase complement(3301058..3301750) Desulfovibrio salexigens DSM 2638 8093661 YP_002992571.1 CDS Desal_2980 NC_012881.1 3301752 3302108 R KEGG: dde:Dde_0093 hypothetical protein; hypothetical protein complement(3301752..3302108) Desulfovibrio salexigens DSM 2638 8093662 YP_002992572.1 CDS Desal_2981 NC_012881.1 3302101 3303762 R PFAM: hydantoinaseoxoprolinase domain protein; hydantoinase/oxoprolinase; KEGG: dvu:DVU0029 hydantoinase/oxoprolinase family protein; hydantoinaseoxoprolinase domain-containing protein complement(3302101..3303762) Desulfovibrio salexigens DSM 2638 8093663 YP_002992573.1 CDS Desal_2982 NC_012881.1 3304025 3304837 R PFAM: protein of unknown function DUF52; KEGG: dvm:DvMF_1326 protein of unknown function DUF52; hypothetical protein complement(3304025..3304837) Desulfovibrio salexigens DSM 2638 8093664 YP_002992574.1 CDS Desal_2983 NC_012881.1 3304856 3308209 R SMART: hypothetical protein; KEGG: dde:Dde_2960 TPR repeat-containing protein; hypothetical protein complement(3304856..3308209) Desulfovibrio salexigens DSM 2638 8093665 YP_002992575.1 CDS Desal_2984 NC_012881.1 3308314 3309330 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: dvm:DvMF_1324 sigma54 specific transcriptional regulator, fis family; Fis family sigma-54 specific transcriptional regulator complement(3308314..3309330) Desulfovibrio salexigens DSM 2638 8093666 YP_002992576.1 CDS Desal_2985 NC_012881.1 3309534 3310946 R TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: scl:sce8087 major facilitator superfamily permease/glucose transporter; sugar transporter complement(3309534..3310946) Desulfovibrio salexigens DSM 2638 8093667 YP_002992577.1 CDS Desal_2986 NC_012881.1 3311129 3312535 R PFAM: FAD dependent oxidoreductase; HI0933 family protein; KEGG: dps:DP0272 hypothetical protein; FAD dependent oxidoreductase complement(3311129..3312535) Desulfovibrio salexigens DSM 2638 8093668 YP_002992578.1 CDS Desal_2987 NC_012881.1 3312781 3313212 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dol:Dole_2259 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 3312781..3313212 Desulfovibrio salexigens DSM 2638 8093669 YP_002992579.1 CDS Desal_2988 NC_012881.1 3313351 3313800 D PFAM: protein of unknown function DUF1499; KEGG: mmw:Mmwyl1_1554 hypothetical protein; hypothetical protein 3313351..3313800 Desulfovibrio salexigens DSM 2638 8093670 YP_002992580.1 CDS Desal_2989 NC_012881.1 3313934 3314368 D KEGG: dat:HRM2_39110 ThiF; ThiF protein 3313934..3314368 Desulfovibrio salexigens DSM 2638 8093671 YP_002992581.1 CDS Desal_2990 NC_012881.1 3314538 3315821 D PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: pfo:Pfl01_2373 twin-arginine translocation pathway signal; agmatine deiminase 3314538..3315821 Desulfovibrio salexigens DSM 2638 8093672 YP_002992582.1 CDS Desal_2991 NC_012881.1 3315981 3316751 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase complement(3315981..3316751) Desulfovibrio salexigens DSM 2638 8093673 YP_002992583.1 CDS Desal_2992 NC_012881.1 3316753 3317172 R Inhibits transcription at high concentrations of nickel; nickel responsive regulator complement(3316753..3317172) Desulfovibrio salexigens DSM 2638 8093674 YP_002992584.1 CDS Desal_2993 NC_012881.1 3317191 3317862 R PFAM: methyltransferase type 11; KEGG: dvl:Dvul_0475 hypothetical protein; methyltransferase type 11 complement(3317191..3317862) Desulfovibrio salexigens DSM 2638 8093675 YP_002992585.1 CDS Desal_2994 NC_012881.1 3318121 3318501 D TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: dde:Dde_1693 glycine cleavage system protein H; glycine cleavage system H protein 3318121..3318501 Desulfovibrio salexigens DSM 2638 8093676 YP_002992586.1 CDS Desal_2995 NC_012881.1 3318591 3319922 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 3318591..3319922 Desulfovibrio salexigens DSM 2638 8093677 YP_002992587.1 CDS Desal_2996 NC_012881.1 3319922 3321367 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 3319922..3321367 Desulfovibrio salexigens DSM 2638 8093678 YP_002992588.1 CDS Desal_2997 NC_012881.1 3321354 3322745 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: dvl:Dvul_1653 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3321354..3322745 Desulfovibrio salexigens DSM 2638 8092091 YP_002992589.1 CDS Desal_2998 NC_012881.1 3322881 3323636 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: hch:HCH_06608 amino acid ABC transporter periplasmic protein; family 3 extracellular solute-binding protein 3322881..3323636 Desulfovibrio salexigens DSM 2638 8094211 YP_002992590.1 CDS Desal_2999 NC_012881.1 3323630 3324811 R hypothetical protein complement(3323630..3324811) Desulfovibrio salexigens DSM 2638 8094212 YP_002992591.1 CDS Desal_3000 NC_012881.1 3324886 3325509 D PFAM: beta-lactamase domain protein; KEGG: dde:Dde_0786 metallo-beta-lactamase family protein; beta-lactamase 3324886..3325509 Desulfovibrio salexigens DSM 2638 8094213 YP_002992592.1 CDS Desal_3001 NC_012881.1 3325733 3326800 R PFAM: DRTGG domain protein; KEGG: dvm:DvMF_0242 DRTGG domain protein; DRTGG domain-containing protein complement(3325733..3326800) Desulfovibrio salexigens DSM 2638 8094214 YP_002992593.1 CDS Desal_3002 NC_012881.1 3326817 3328925 R PFAM: CoA-binding domain protein; KEGG: dol:Dole_3063 CoA-binding domain-containing protein; CoA-binding protein complement(3326817..3328925) Desulfovibrio salexigens DSM 2638 8094215 YP_002992594.1 CDS rnc NC_012881.1 3328954 3329658 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 3328954..3329658 Desulfovibrio salexigens DSM 2638 8094216 YP_002992595.1 CDS Desal_3004 NC_012881.1 3329894 3330766 R PFAM: flagellin domain protein; KEGG: dde:Dde_1709 flagellin; flagellin domain-containing protein complement(3329894..3330766) Desulfovibrio salexigens DSM 2638 8094217 YP_002992596.1 CDS Desal_3005 NC_012881.1 3331290 3332939 R PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body FlaE domain protein; KEGG: dvm:DvMF_0246 protein of unknown function DUF1078 domain protein; hypothetical protein complement(3331290..3332939) Desulfovibrio salexigens DSM 2638 8094218 YP_002992597.1 CDS Desal_3006 NC_012881.1 3333013 3333741 R PFAM: flagellar hook capping protein; KEGG: dde:Dde_1712 basal-body rod modification protein FlgD; flagellar hook capping protein complement(3333013..3333741) Desulfovibrio salexigens DSM 2638 8094219 YP_002992598.1 CDS Desal_3007 NC_012881.1 3333784 3335535 R PFAM: flagellar hook-length control protein; KEGG: dde:Dde_1713 hypothetical protein; flagellar hook-length control protein complement(3333784..3335535) Desulfovibrio salexigens DSM 2638 8094220 YP_002992599.1 CDS Desal_3008 NC_012881.1 3335672 3337084 R PFAM: glycosyl transferase family 9; KEGG: dvm:DvMF_0249 glycosyl transferase family 9; glycosyl transferase family protein complement(3335672..3337084) Desulfovibrio salexigens DSM 2638 8094221 YP_002992600.1 CDS Desal_3009 NC_012881.1 3337194 3337838 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(3337194..3337838) Desulfovibrio salexigens DSM 2638 8094222 YP_002992601.1 CDS Desal_3010 NC_012881.1 3338238 3339449 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3338238..3339449 Desulfovibrio salexigens DSM 2638 8094223 YP_002992602.1 CDS Desal_3011 NC_012881.1 3339774 3340532 R PFAM: protein of unknown function UPF0153; KEGG: dat:HRM2_07600 hypothetical protein; hypothetical protein complement(3339774..3340532) Desulfovibrio salexigens DSM 2638 8094224 YP_002992603.1 CDS Desal_3012 NC_012881.1 3340513 3341460 R PFAM: Bile acid:sodium symporter; KEGG: abo:ABO_2515 Na+ symporter family protein; bile acid:sodium symporter complement(3340513..3341460) Desulfovibrio salexigens DSM 2638 8094225 YP_002992604.1 CDS Desal_3013 NC_012881.1 3341610 3342629 D PFAM: protein of unknown function DUF472; protein of unknown function DUF470; KEGG: maq:Maqu_2225 hypothetical protein; hypothetical protein 3341610..3342629 Desulfovibrio salexigens DSM 2638 8094226 YP_002992605.1 CDS Desal_3014 NC_012881.1 3342649 3342966 R PFAM: Hpt domain protein; KEGG: sat:SYN_00227 cytoplasmic protein; Hpt protein complement(3342649..3342966) Desulfovibrio salexigens DSM 2638 8094227 YP_002992606.1 CDS Desal_3015 NC_012881.1 3342970 3345345 R PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: sat:SYN_00226 signal transduction histidine kinase; histidine kinase complement(3342970..3345345) Desulfovibrio salexigens DSM 2638 8094276 YP_002992607.1 CDS Desal_3016 NC_012881.1 3345362 3346375 R PFAM: basic membrane lipoprotein; KEGG: hch:HCH_02309 uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein; basic membrane lipoprotein complement(3345362..3346375) Desulfovibrio salexigens DSM 2638 8094256 YP_002992608.1 CDS Desal_3017 NC_012881.1 3346392 3347900 R TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: dde:Dde_2276 small GTP-binding protein domain-containing protein; small GTP-binding protein complement(3346392..3347900) Desulfovibrio salexigens DSM 2638 8094257 YP_002992609.1 CDS Desal_3018 NC_012881.1 3348109 3349803 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(3348109..3349803) Desulfovibrio salexigens DSM 2638 8094258 YP_002992610.1 CDS Desal_3019 NC_012881.1 3350192 3350650 D KEGG: dvl:Dvul_2679 chemotaxis protein CheX; chemotaxis protein CheX 3350192..3350650 Desulfovibrio salexigens DSM 2638 8094259 YP_002992611.1 CDS Desal_3020 NC_012881.1 3350707 3353046 R KEGG: pin:Ping_0273 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(3350707..3353046) Desulfovibrio salexigens DSM 2638 8094260 YP_002992612.1 CDS Desal_3021 NC_012881.1 3353139 3353456 R KEGG: azc:AZC_2135 hypothetical protein; hypothetical protein complement(3353139..3353456) Desulfovibrio salexigens DSM 2638 8094261 YP_002992613.1 CDS Desal_3022 NC_012881.1 3353646 3354290 D PFAM: peptidase S24 and S26 domain protein; KEGG: dde:Dde_1158 transcriptional regulator; phage repressor 3353646..3354290 Desulfovibrio salexigens DSM 2638 8094262 YP_002992614.1 CDS Desal_3023 NC_012881.1 3354475 3354762 D PFAM: chaperonin Cpn10; KEGG: dds:Ddes_1547 chaperonin Cpn10; chaperonin Cpn10 3354475..3354762 Desulfovibrio salexigens DSM 2638 8094263 YP_002992615.1 CDS groEL NC_012881.1 3354849 3356522 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 3354849..3356522 Desulfovibrio salexigens DSM 2638 8094264 YP_002992616.1 CDS Desal_3025 NC_012881.1 3356626 3357501 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(3356626..3357501) Desulfovibrio salexigens DSM 2638 8094265 YP_002992617.1 CDS Desal_3026 NC_012881.1 3357613 3358002 R TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: dds:Ddes_2348 glycine cleavage system H protein; glycine cleavage system H protein complement(3357613..3358002) Desulfovibrio salexigens DSM 2638 8094266 YP_002992618.1 CDS Desal_3027 NC_012881.1 3358048 3359472 R TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; KEGG: dds:Ddes_0151 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(3358048..3359472) Desulfovibrio salexigens DSM 2638 8094267 YP_002992619.1 CDS Desal_3028 NC_012881.1 3359497 3359925 R PFAM: OsmC family protein; KEGG: dds:Ddes_2346 hypothetical protein; OsmC family protein complement(3359497..3359925) Desulfovibrio salexigens DSM 2638 8094268 YP_002992620.1 CDS Desal_3029 NC_012881.1 3360341 3361333 R KEGG: dvu:DVU1955 TPR domain-containing protein; hypothetical protein complement(3360341..3361333) Desulfovibrio salexigens DSM 2638 8094269 YP_002992621.1 CDS Desal_3030 NC_012881.1 3361606 3362847 D PFAM: peptidase M48 Ste24p; KEGG: dat:HRM2_15460 endopeptidase family protein; Ste24 endopeptidase 3361606..3362847 Desulfovibrio salexigens DSM 2638 8094270 YP_002992622.1 CDS Desal_3031 NC_012881.1 3362955 3363608 D PFAM: class II aldolase/adducin family protein; KEGG: pca:Pcar_3030 L-fuculose-1-phosphate aldolase; class II aldolase/adducin family protein 3362955..3363608 Desulfovibrio salexigens DSM 2638 8094271 YP_002992623.1 CDS Desal_3032 NC_012881.1 3363611 3364222 D PFAM: multiple antibiotic resistance (MarC)-related protein; Integral membrane protein TerC; KEGG: dde:Dde_2198 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like protein 3363611..3364222 Desulfovibrio salexigens DSM 2638 8094272 YP_002992624.1 CDS Desal_3033 NC_012881.1 3364235 3366211 R KEGG: dvl:Dvul_1570 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor protein complement(3364235..3366211) Desulfovibrio salexigens DSM 2638 8094273 YP_002992625.1 CDS Desal_3034 NC_012881.1 3366501 3367049 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: geo:Geob_2267 CheW protein; CheW protein complement(3366501..3367049) Desulfovibrio salexigens DSM 2638 8094274 YP_002992626.1 CDS Desal_3035 NC_012881.1 3367143 3369167 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dde:Dde_1077 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3367143..3369167) Desulfovibrio salexigens DSM 2638 8094275 YP_002992627.1 CDS Desal_3036 NC_012881.1 3369344 3369688 R PFAM: Hpt domain protein; KEGG: glo:Glov_0387 multi-sensor hybrid histidine kinase; Hpt protein complement(3369344..3369688) Desulfovibrio salexigens DSM 2638 8092223 YP_002992628.1 CDS Desal_3037 NC_012881.1 3369736 3371388 R KEGG: dvm:DvMF_0922 hypothetical protein; hypothetical protein complement(3369736..3371388) Desulfovibrio salexigens DSM 2638 8092224 YP_002992629.1 CDS Desal_3038 NC_012881.1 3371614 3372894 R KEGG: dal:Dalk_3760 response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase complement(3371614..3372894) Desulfovibrio salexigens DSM 2638 8092225 YP_002992630.1 CDS Desal_3039 NC_012881.1 3379490 3380956 R PFAM: adenosine/AMP deaminase; KEGG: xac:XAC0308 adenosine deaminase; adenosine/AMP deaminase complement(3379490..3380956) Desulfovibrio salexigens DSM 2638 8092231 YP_002992631.1 CDS Desal_3040 NC_012881.1 3381109 3381513 R KEGG: dvl:Dvul_2715 acidic cytochrome c3; acidic cytochrome c3 complement(3381109..3381513) Desulfovibrio salexigens DSM 2638 8092232 YP_002992632.1 CDS Desal_3041 NC_012881.1 3381527 3382837 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: dde:Dde_3709 ferredoxin, 4Fe-4S; hypothetical protein complement(3381527..3382837) Desulfovibrio salexigens DSM 2638 8092233 YP_002992633.1 CDS Desal_3042 NC_012881.1 3382864 3383523 R KEGG: dde:Dde_3708 hypothetical protein; hypothetical protein complement(3382864..3383523) Desulfovibrio salexigens DSM 2638 8092234 YP_002992634.1 CDS Desal_3043 NC_012881.1 3383543 3384796 R KEGG: dde:Dde_3707 hypothetical protein; hypothetical protein complement(3383543..3384796) Desulfovibrio salexigens DSM 2638 8092235 YP_002992635.1 CDS Desal_3044 NC_012881.1 3385216 3386280 R PFAM: DRTGG domain protein; KEGG: dvl:Dvul_1641 DRTGG domain-containing protein; DRTGG domain-containing protein complement(3385216..3386280) Desulfovibrio salexigens DSM 2638 8092236 YP_002992636.1 CDS Desal_3045 NC_012881.1 3386291 3388417 R PFAM: CoA-binding domain protein; KEGG: dal:Dalk_1024 acetyl coenzyme A synthetase (ADP forming), alpha domain protein; CoA-binding protein complement(3386291..3388417) Desulfovibrio salexigens DSM 2638 8092237 YP_002992637.1 CDS Desal_3046 NC_012881.1 3388842 3389834 D KEGG: dvm:DvMF_0966 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3388842..3389834 Desulfovibrio salexigens DSM 2638 8092238 YP_002992638.1 CDS Desal_3047 NC_012881.1 3389912 3393112 R PFAM: acriflavin resistance protein; KEGG: dat:HRM2_02370 cobalt-zinc-cadmium resistance protein CzcA-like protein; acriflavin resistance protein complement(3389912..3393112) Desulfovibrio salexigens DSM 2638 8092239 YP_002992639.1 CDS Desal_3048 NC_012881.1 3393105 3394328 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dat:HRM2_02380 membrane-fusion protein; RND family efflux transporter MFP subunit complement(3393105..3394328) Desulfovibrio salexigens DSM 2638 8092240 YP_002992640.1 CDS Desal_3049 NC_012881.1 3394331 3395827 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: dat:HRM2_02390 outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(3394331..3395827) Desulfovibrio salexigens DSM 2638 8091288 YP_002992641.1 CDS Desal_3050 NC_012881.1 3395974 3396672 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sme:SM_b21561 two component response regulator protein; transcriptional regulator 3395974..3396672 Desulfovibrio salexigens DSM 2638 8092097 YP_002992642.1 CDS Desal_3051 NC_012881.1 3396672 3398054 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: lpn:lpg1437 sensor histidine kinase CpxA; histidine kinase 3396672..3398054 Desulfovibrio salexigens DSM 2638 8092098 YP_002992643.1 CDS Desal_3052 NC_012881.1 3398084 3398509 D PFAM: GCN5-related N-acetyltransferase; KEGG: dps:DP2914 hypothetical protein; N-acetyltransferase GCN5 3398084..3398509 Desulfovibrio salexigens DSM 2638 8092099 YP_002992644.1 CDS Desal_3053 NC_012881.1 3398518 3399138 R PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: pca:Pcar_1392 S-adenosylmethionine-dependent methyltransferase; methyltransferase type 11 complement(3398518..3399138) Desulfovibrio salexigens DSM 2638 8092100 YP_002992645.1 CDS trpA NC_012881.1 3399195 3399962 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(3399195..3399962) Desulfovibrio salexigens DSM 2638 8092101 YP_002992646.1 CDS Desal_3055 NC_012881.1 3399976 3401154 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(3399976..3401154) Desulfovibrio salexigens DSM 2638 8092102 YP_002992647.1 CDS Desal_3056 NC_012881.1 3401322 3401939 R PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: dvm:DvMF_1742 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase complement(3401322..3401939) Desulfovibrio salexigens DSM 2638 8092103 YP_002992648.1 CDS Desal_3057 NC_012881.1 3401936 3402715 R PFAM: indole-3-glycerol phosphate synthase; KEGG: dvl:Dvul_2469 indole-3-glycerol-phosphate synthase; indole-3-glycerol-phosphate synthase complement(3401936..3402715) Desulfovibrio salexigens DSM 2638 8092104 YP_002992649.1 CDS Desal_3058 NC_012881.1 3402719 3403708 R KEGG: dvm:DvMF_1744 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase complement(3402719..3403708) Desulfovibrio salexigens DSM 2638 8092105 YP_002992650.1 CDS Desal_3059 NC_012881.1 3403739 3404311 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: dvm:DvMF_1745 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase complement(3403739..3404311) Desulfovibrio salexigens DSM 2638 8092106 YP_002992651.1 CDS Desal_3060 NC_012881.1 3404292 3405707 R PFAM: Chorismate binding-like; anthranilate synthase component I domain protein; KEGG: dvm:DvMF_1746 anthranilate synthase; anthranilate synthase complement(3404292..3405707) Desulfovibrio salexigens DSM 2638 8092107 YP_002992652.1 CDS Desal_3061 NC_012881.1 3405954 3406730 R PFAM: prephenate dehydrogenase; KEGG: dds:Ddes_0334 prephenate dehydrogenase; prephenate dehydrogenase complement(3405954..3406730) Desulfovibrio salexigens DSM 2638 8092108 YP_002992653.1 CDS Desal_3062 NC_012881.1 3406733 3408067 R KEGG: dvm:DvMF_1748 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase complement(3406733..3408067) Desulfovibrio salexigens DSM 2638 8092109 YP_002992654.1 CDS Desal_3063 NC_012881.1 3408114 3409217 R PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase; KEGG: dvm:DvMF_1749 prephenate dehydratase; prephenate dehydratase complement(3408114..3409217) Desulfovibrio salexigens DSM 2638 8092110 YP_002992655.1 CDS Desal_3064 NC_012881.1 3409225 3410208 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-aribino-heptulonate 7-phosphate; 3-dehydroquinate synthase complement(3409225..3410208) Desulfovibrio salexigens DSM 2638 8092111 YP_002992656.1 CDS Desal_3065 NC_012881.1 3410223 3411020 R KEGG: dvl:Dvul_2477 fructose-bisphosphate aldolase; TIGRFAM: predicted phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3410223..3411020) Desulfovibrio salexigens DSM 2638 8092112 YP_002992657.1 CDS Desal_3066 NC_012881.1 3411577 3412947 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: dde:Dde_3492 ammonium transporter; ammonium transporter 3411577..3412947 Desulfovibrio salexigens DSM 2638 8092113 YP_002992658.1 CDS Desal_3067 NC_012881.1 3412978 3413307 D PFAM: nitrogen regulatory protein P-II; KEGG: dde:Dde_3493 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 3412978..3413307 Desulfovibrio salexigens DSM 2638 8092114 YP_002992659.1 CDS Desal_3068 NC_012881.1 3413556 3414776 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: dvm:DvMF_1754 diguanylate phosphodiesterase; diguanylate phosphodiesterase 3413556..3414776 Desulfovibrio salexigens DSM 2638 8092115 YP_002992660.1 CDS Desal_3069 NC_012881.1 3414874 3415773 D TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvm:DvMF_2967 RarD protein, DMT superfamily transporter; RarD protein, DMT superfamily transporter 3414874..3415773 Desulfovibrio salexigens DSM 2638 8092116 YP_002992661.1 CDS Desal_3070 NC_012881.1 3415801 3418092 D KEGG: mms:mma_2307 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 3415801..3418092 Desulfovibrio salexigens DSM 2638 8092117 YP_002992662.1 CDS Desal_3071 NC_012881.1 3418283 3419704 D TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; KEGG: reu:Reut_A1791 aspartate ammonia-lyase; aspartate ammonia-lyase 3418283..3419704 Desulfovibrio salexigens DSM 2638 8092118 YP_002992663.1 CDS Desal_3072 NC_012881.1 3419774 3421000 D PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: dps:DP1361 tyrosine transporter; aromatic amino acid permease 3419774..3421000 Desulfovibrio salexigens DSM 2638 8092119 YP_002992664.1 CDS Desal_3073 NC_012881.1 3421095 3421901 R PFAM: penicillin-binding protein transpeptidase; KEGG: pap:PSPA7_6316 beta-lactamase PSE-2 (beta lactamase OXA-10); beta-lactamase complement(3421095..3421901) Desulfovibrio salexigens DSM 2638 8092120 YP_002992665.1 CDS Desal_3074 NC_012881.1 3421938 3422936 R KEGG: dol:Dole_1154 ankyrin repeat-containing protein; hypothetical protein complement(3421938..3422936) Desulfovibrio salexigens DSM 2638 8092121 YP_002992666.1 CDS Desal_3075 NC_012881.1 3423100 3423363 R PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: dvm:DvMF_2964 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein complement(3423100..3423363) Desulfovibrio salexigens DSM 2638 8092122 YP_002992667.1 CDS Desal_3076 NC_012881.1 3423609 3425090 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: ppd:Ppro_0754 DEAD/DEAH box helicase domain-containing protein; DEAD/DEAH box helicase complement(3423609..3425090) Desulfovibrio salexigens DSM 2638 8092123 YP_002992668.1 CDS Desal_3077 NC_012881.1 3425389 3426807 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(3425389..3426807) Desulfovibrio salexigens DSM 2638 8092124 YP_002992669.1 CDS Desal_3078 NC_012881.1 3426841 3427752 R PFAM: methyltransferase type 11; regulatory protein ArsR; methyltransferase type 12; SMART: regulatory protein ArsR; KEGG: dvl:Dvul_2348 methyltransferase type 11; ArsR family transcriptional regulator complement(3426841..3427752) Desulfovibrio salexigens DSM 2638 8092125 YP_002992670.1 CDS Desal_3079 NC_012881.1 3427935 3428438 D PFAM: protein of unknown function DUF721; KEGG: dvl:Dvul_2350 hypothetical protein; hypothetical protein 3427935..3428438 Desulfovibrio salexigens DSM 2638 8092126 YP_002992671.1 CDS Desal_3080 NC_012881.1 3428475 3428822 D KEGG: dal:Dalk_0401 hypothetical protein; hypothetical protein 3428475..3428822 Desulfovibrio salexigens DSM 2638 8092127 YP_002992672.1 CDS Desal_3082 NC_012881.1 3431028 3431441 R hypothetical protein complement(3431028..3431441) Desulfovibrio salexigens DSM 2638 8092136 YP_002992673.1 CDS Desal_3083 NC_012881.1 3431540 3432427 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dvl:Dvul_0075 LysR family transcriptional regulator; LysR family transcriptional regulator 3431540..3432427 Desulfovibrio salexigens DSM 2638 8092137 YP_002992674.1 CDS Desal_3084 NC_012881.1 3432523 3433047 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dvm:DvMF_0634 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3432523..3433047 Desulfovibrio salexigens DSM 2638 8092138 YP_002992675.1 CDS Desal_3085 NC_012881.1 3433255 3433821 D KEGG: dvl:Dvul_1908 hypothetical protein; hypothetical protein 3433255..3433821 Desulfovibrio salexigens DSM 2638 8092139 YP_002992676.1 CDS Desal_3086 NC_012881.1 3433831 3434973 D KEGG: dvl:Dvul_0169 hypothetical protein; hypothetical protein 3433831..3434973 Desulfovibrio salexigens DSM 2638 8092140 YP_002992677.1 CDS Desal_3087 NC_012881.1 3435070 3435342 D KEGG: tcx:Tcr_1766 hypothetical protein; hypothetical protein 3435070..3435342 Desulfovibrio salexigens DSM 2638 8092222 YP_002992678.1 CDS Desal_3088 NC_012881.1 3435346 3436998 D PFAM: PhoU family protein; KEGG: tcx:Tcr_1767 hypothetical protein; phosphate uptake regulator PhoU 3435346..3436998 Desulfovibrio salexigens DSM 2638 8093751 YP_002992679.1 CDS Desal_3089 NC_012881.1 3437022 3437897 D PFAM: RimK domain protein ATP-grasp; KEGG: pin:Ping_2322 RimK domain-containing protein ATP-grasp; RimK domain-containing protein ATP-grasp 3437022..3437897 Desulfovibrio salexigens DSM 2638 8093752 YP_002992680.1 CDS Desal_3090 NC_012881.1 3437897 3438985 D KEGG: pin:Ping_2321 HPr kinase; HPr kinase 3437897..3438985 Desulfovibrio salexigens DSM 2638 8093753 YP_002992681.1 CDS Desal_3091 NC_012881.1 3439019 3440206 D PFAM: protein of unknown function UPF0052 and CofD; KEGG: dde:Dde_3600 hypothetical protein; hypothetical protein 3439019..3440206 Desulfovibrio salexigens DSM 2638 8093754 YP_002992682.1 CDS Desal_3092 NC_012881.1 3440232 3440579 D KEGG: dvu:DVU3217 hypothetical protein; hypothetical protein 3440232..3440579 Desulfovibrio salexigens DSM 2638 8093755 YP_002992683.1 CDS Desal_3093 NC_012881.1 3440761 3441624 D PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_1838 nitroreductase; nitroreductase 3440761..3441624 Desulfovibrio salexigens DSM 2638 8093756 YP_002992684.1 CDS Desal_3094 NC_012881.1 3441663 3442163 R KEGG: dvm:DvMF_2639 hypothetical protein; hypothetical protein complement(3441663..3442163) Desulfovibrio salexigens DSM 2638 8093757 YP_002992685.1 CDS Desal_3095 NC_012881.1 3442318 3445434 R KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS/PAC sensor hybrid histidine kinase complement(3442318..3445434) Desulfovibrio salexigens DSM 2638 8093758 YP_002992686.1 CDS Desal_3096 NC_012881.1 3445680 3445955 D KEGG: dde:Dde_0283 hypothetical protein; hypothetical protein 3445680..3445955 Desulfovibrio salexigens DSM 2638 8093759 YP_002992687.1 CDS Desal_3097 NC_012881.1 3446044 3446895 R KEGG: sfu:Sfum_0659 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: xylose isomerase; SMART: AP endonuclease family 2; apurinic endonuclease Apn1 complement(3446044..3446895) Desulfovibrio salexigens DSM 2638 8093760 YP_002992688.1 CDS Desal_3098 NC_012881.1 3446925 3448061 R PFAM: protein of unknown function UPF0052 and CofD; KEGG: dde:Dde_3600 hypothetical protein; hypothetical protein complement(3446925..3448061) Desulfovibrio salexigens DSM 2638 8093761 YP_002992689.1 CDS Desal_3099 NC_012881.1 3448292 3448897 D PFAM: protein of unknown function UPF0227; KEGG: kpn:KPN_03445 esterase YqiA; hypothetical protein 3448292..3448897 Desulfovibrio salexigens DSM 2638 8093762 YP_002992690.1 CDS Desal_3100 NC_012881.1 3448894 3450078 R PFAM: protein of unknown function DUF482; KEGG: pzu:PHZ_c1300 hypothetical protein; hypothetical protein complement(3448894..3450078) Desulfovibrio salexigens DSM 2638 8093763 YP_002992691.1 CDS Desal_3101 NC_012881.1 3450098 3451012 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dvl:Dvul_0075 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3450098..3451012) Desulfovibrio salexigens DSM 2638 8093764 YP_002992692.1 CDS Desal_3102 NC_012881.1 3451194 3451619 D PFAM: nitrogen-fixing NifU domain protein; KEGG: dal:Dalk_4352 nitrogen-fixing NifU domain protein; nitrogen-fixing NifU domain-containing protein 3451194..3451619 Desulfovibrio salexigens DSM 2638 8093765 YP_002992693.1 CDS Desal_3103 NC_012881.1 3451630 3454650 R KEGG: dal:Dalk_4452 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein; PAS/PAC sensor hybrid histidine kinase complement(3451630..3454650) Desulfovibrio salexigens DSM 2638 8093766 YP_002992694.1 CDS Desal_3104 NC_012881.1 3454671 3455720 R KEGG: pca:Pcar_1057 hypothetical protein; hypothetical protein complement(3454671..3455720) Desulfovibrio salexigens DSM 2638 8093767 YP_002992695.1 CDS Desal_3105 NC_012881.1 3455841 3456890 R PFAM: endonuclease/exonuclease/phosphatase; KEGG: pst:PSPTO_4669 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase complement(3455841..3456890) Desulfovibrio salexigens DSM 2638 8093768 YP_002992696.1 CDS Desal_3106 NC_012881.1 3457065 3457238 R hypothetical protein complement(3457065..3457238) Desulfovibrio salexigens DSM 2638 8093769 YP_002992697.1 CDS Desal_3107 NC_012881.1 3457319 3457780 R KEGG: Pkd1l2; polycystic kidney disease 1 like 2 ; K04988 polycystin 1L2; hypothetical protein complement(3457319..3457780) Desulfovibrio salexigens DSM 2638 8093851 YP_002992698.1 CDS Desal_3108 NC_012881.1 3457861 3458442 D hypothetical protein 3457861..3458442 Desulfovibrio salexigens DSM 2638 8091457 YP_002992699.1 CDS Desal_3109 NC_012881.1 3458720 3459058 D hypothetical protein 3458720..3459058 Desulfovibrio salexigens DSM 2638 8091458 YP_002992700.1 CDS Desal_3110 NC_012881.1 3459148 3459858 R hypothetical protein complement(3459148..3459858) Desulfovibrio salexigens DSM 2638 8091459 YP_002992701.1 CDS Desal_3111 NC_012881.1 3460170 3460337 R KEGG: dvl:Dvul_1412 hypothetical protein; hypothetical protein complement(3460170..3460337) Desulfovibrio salexigens DSM 2638 8091460 YP_002992702.1 CDS Desal_3112 NC_012881.1 3460555 3461211 R PFAM: peptidase S24 and S26 domain protein; CI repressor; KEGG: dde:Dde_1980 transcriptional regulator; phage repressor complement(3460555..3461211) Desulfovibrio salexigens DSM 2638 8091461 YP_002992703.1 CDS Desal_3113 NC_012881.1 3461374 3461673 D hypothetical protein 3461374..3461673 Desulfovibrio salexigens DSM 2638 8091462 YP_002992704.1 CDS Desal_3114 NC_012881.1 3461738 3463978 R KEGG: dde:Dde_2598 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Cold shock protein; ribonuclease R complement(3461738..3463978) Desulfovibrio salexigens DSM 2638 8091463 YP_002992705.1 CDS Desal_3115 NC_012881.1 3464092 3465171 R KEGG: dvu:DVU2468 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(3464092..3465171) Desulfovibrio salexigens DSM 2638 8091464 YP_002992706.1 CDS Desal_3116 NC_012881.1 3465257 3465988 R PFAM: protein of unknown function UPF0005; KEGG: dvm:DvMF_0927 protein of unknown function UPF0005; hypothetical protein complement(3465257..3465988) Desulfovibrio salexigens DSM 2638 8091465 YP_002992707.1 CDS Desal_3117 NC_012881.1 3466127 3467575 R TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: cbd:CBUD_1525 di-/tripeptide transporter; amino acid/peptide transporter complement(3466127..3467575) Desulfovibrio salexigens DSM 2638 8091466 YP_002992708.1 CDS Desal_3118 NC_012881.1 3467799 3468905 D KEGG: rso:RS05060 signal peptide protein; signal peptide protein 3467799..3468905 Desulfovibrio salexigens DSM 2638 8091467 YP_002992709.1 CDS Desal_3119 NC_012881.1 3468970 3469917 R TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: dde:Dde_2409 K+-dependent Na+/Ca+ exchanger related-protein; CaCA family Na+/Ca+ antiporter complement(3468970..3469917) Desulfovibrio salexigens DSM 2638 8091468 YP_002992710.1 CDS Desal_3120 NC_012881.1 3470148 3471197 R KEGG: dde:Dde_2372 hypothetical protein; hypothetical protein complement(3470148..3471197) Desulfovibrio salexigens DSM 2638 8091469 YP_002992711.1 CDS recA NC_012881.1 3471456 3472523 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 3471456..3472523 Desulfovibrio salexigens DSM 2638 8091470 YP_002992712.1 CDS alaS NC_012881.1 3472633 3475275 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 3472633..3475275 Desulfovibrio salexigens DSM 2638 8091471 YP_002992713.1 CDS Desal_3123 NC_012881.1 3475366 3475794 D TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: dvl:Dvul_0726 50S ribosomal protein L13; 50S ribosomal protein L13 3475366..3475794 Desulfovibrio salexigens DSM 2638 8091472 YP_002992714.1 CDS rpsI NC_012881.1 3475814 3476206 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 3475814..3476206 Desulfovibrio salexigens DSM 2638 8091473 YP_002992715.1 CDS Desal_3125 NC_012881.1 3476508 3477758 D PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; KEGG: dde:Dde_3084 signal transduction protein; diguanylate phosphodiesterase 3476508..3477758 Desulfovibrio salexigens DSM 2638 8091474 YP_002992716.1 CDS Desal_3126 NC_012881.1 3477788 3479203 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: glo:Glov_0136 multi-sensor signal transduction histidine kinase; histidine kinase 3477788..3479203 Desulfovibrio salexigens DSM 2638 8091475 YP_002992717.1 CDS Desal_3127 NC_012881.1 3479219 3480496 D PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dde:Dde_1676 elongator protein 3/MiaB/NifB; radical SAM domain protein 3479219..3480496 Desulfovibrio salexigens DSM 2638 8091476 YP_002992718.1 CDS Desal_3128 NC_012881.1 3480737 3482809 D KEGG: sat:SYN_00612 hypothetical protein; hypothetical protein 3480737..3482809 Desulfovibrio salexigens DSM 2638 8091477 YP_002992719.1 CDS Desal_3129 NC_012881.1 3482827 3483414 D KEGG: aeh:Mlg_0868 hypothetical protein; hypothetical protein 3482827..3483414 Desulfovibrio salexigens DSM 2638 8091478 YP_002992720.1 CDS Desal_3130 NC_012881.1 3483399 3484877 D PFAM: protein of unknown function UPF0061; KEGG: rlt:Rleg2_0857 protein of unknown function UPF0061; hypothetical protein 3483399..3484877 Desulfovibrio salexigens DSM 2638 8091479 YP_002992721.1 CDS Desal_3131 NC_012881.1 3484900 3486153 D PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: hip:CGSHiEE_05405 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein 3484900..3486153 Desulfovibrio salexigens DSM 2638 8091480 YP_002992722.1 CDS Desal_3132 NC_012881.1 3486232 3487278 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(3486232..3487278) Desulfovibrio salexigens DSM 2638 8091481 YP_002992723.1 CDS Desal_3133 NC_012881.1 3487439 3487708 D hypothetical protein 3487439..3487708 Desulfovibrio salexigens DSM 2638 8091482 YP_002992724.1 CDS Desal_3134 NC_012881.1 3487730 3488743 D PFAM: radical SAM domain protein; KEGG: dvl:Dvul_1670 radical SAM domain-containing protein; radical SAM domain protein 3487730..3488743 Desulfovibrio salexigens DSM 2638 8091483 YP_002992725.1 CDS Desal_3135 NC_012881.1 3489202 3489759 R hypothetical protein complement(3489202..3489759) Desulfovibrio salexigens DSM 2638 8091485 YP_002992726.1 CDS Desal_3136 NC_012881.1 3489836 3491797 R TIGRFAM: YD repeat protein; KEGG: sfu:Sfum_4063 NHL repeat containing protein; YD repeat protein complement(3489836..3491797) Desulfovibrio salexigens DSM 2638 8091486 YP_002992727.1 CDS Desal_3137 NC_012881.1 3492315 3493367 D hypothetical protein 3492315..3493367 Desulfovibrio salexigens DSM 2638 8091487 YP_002992728.1 CDS Desal_3138 NC_012881.1 3493461 3494573 R TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvl:Dvul_1198 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase family protein complement(3493461..3494573) Desulfovibrio salexigens DSM 2638 8091488 YP_002992729.1 CDS Desal_3139 NC_012881.1 3494725 3495960 D PFAM: beta-lactamase; KEGG: dal:Dalk_1093 serine-type D-Ala-D-Ala carboxypeptidase; beta-lactamase 3494725..3495960 Desulfovibrio salexigens DSM 2638 8091489 YP_002992730.1 CDS Desal_3140 NC_012881.1 3496032 3496289 D hypothetical protein 3496032..3496289 Desulfovibrio salexigens DSM 2638 8091490 YP_002992731.1 CDS Desal_3141 NC_012881.1 3496337 3496678 R PFAM: protein of unknown function DUF1291; KEGG: dat:HRM2_17470 hypothetical protein; hypothetical protein complement(3496337..3496678) Desulfovibrio salexigens DSM 2638 8091491 YP_002992732.1 CDS Desal_3142 NC_012881.1 3496788 3497354 R PFAM: hypothetical protein; KEGG: dat:HRM2_33420 multidomain fusion protein (N:DNA-binding domain/C:signal transduction histidine kinase); hypothetical protein complement(3496788..3497354) Desulfovibrio salexigens DSM 2638 8091492 YP_002992733.1 CDS Desal_3143 NC_012881.1 3497377 3497859 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: swp:swp_0619 regulatory protein, MarR; MarR family transcriptional regulator complement(3497377..3497859) Desulfovibrio salexigens DSM 2638 8091493 YP_002992734.1 CDS Desal_3144 NC_012881.1 3498005 3498901 R PFAM: protein of unknown function DUF161; KEGG: dde:Dde_2520 hypothetical protein; hypothetical protein complement(3498005..3498901) Desulfovibrio salexigens DSM 2638 8091494 YP_002992735.1 CDS Desal_3145 NC_012881.1 3499050 3499331 R KEGG: dde:Dde_1001 hypothetical protein; hypothetical protein complement(3499050..3499331) Desulfovibrio salexigens DSM 2638 8091495 YP_002992736.1 CDS Desal_3146 NC_012881.1 3499595 3501718 D KEGG: dde:Dde_0558 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; extracellular solute-binding protein family 3; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3499595..3501718 Desulfovibrio salexigens DSM 2638 8091496 YP_002992737.1 CDS Desal_3147 NC_012881.1 3501752 3503938 R KEGG: dvl:Dvul_2233 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase complement(3501752..3503938) Desulfovibrio salexigens DSM 2638 8091497 YP_002992738.1 CDS Desal_3148 NC_012881.1 3503935 3505080 R PFAM: extracellular ligand-binding receptor; KEGG: dvu:DVU0738 substrate-binding protein; extracellular ligand-binding receptor complement(3503935..3505080) Desulfovibrio salexigens DSM 2638 8091498 YP_002992739.1 CDS Desal_3149 NC_012881.1 3505316 3506986 D PFAM: hypothetical protein; KEGG: shm:Shewmr7_1158 hypothetical protein 341; hypothetical protein 3505316..3506986 Desulfovibrio salexigens DSM 2638 8091499 YP_002992740.1 CDS Desal_3150 NC_012881.1 3507106 3508998 D KEGG: dal:Dalk_5017 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; signal transduction histidine kinase, nitrogen specific, NtrB 3507106..3508998 Desulfovibrio salexigens DSM 2638 8091500 YP_002992741.1 CDS Desal_3151 NC_012881.1 3509105 3510592 R TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: xcc:XCC0358 glycerol kinase; glycerol kinase complement(3509105..3510592) Desulfovibrio salexigens DSM 2638 8091501 YP_002992742.1 CDS Desal_3152 NC_012881.1 3510679 3511386 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bid:Bind_0379 MIP family channel protein; MIP family channel protein complement(3510679..3511386) Desulfovibrio salexigens DSM 2638 8091502 YP_002992743.1 CDS Desal_3153 NC_012881.1 3512047 3513609 R PFAM: FAD dependent oxidoreductase; KEGG: dat:HRM2_22630 GlpA; FAD dependent oxidoreductase complement(3512047..3513609) Desulfovibrio salexigens DSM 2638 8091503 YP_002992744.1 CDS Desal_3154 NC_012881.1 3514195 3515022 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: bid:Bind_0377 DeoR family transcriptional regulator; DeoR family transcriptional regulator 3514195..3515022 Desulfovibrio salexigens DSM 2638 8091504 YP_002992745.1 CDS Desal_3155 NC_012881.1 3515082 3516431 R PFAM: radical SAM domain protein; KEGG: dvu:DVUA0097 radical SAM domain-containing protein; radical SAM domain protein complement(3515082..3516431) Desulfovibrio salexigens DSM 2638 8091505 YP_002992746.1 CDS Desal_3156 NC_012881.1 3516690 3516974 D KEGG: dde:Dde_1149 hypothetical protein; hypothetical protein 3516690..3516974 Desulfovibrio salexigens DSM 2638 8091506 YP_002992747.1 CDS Desal_3157 NC_012881.1 3517059 3518168 R KEGG: dvm:DvMF_0659 hypothetical protein; hypothetical protein complement(3517059..3518168) Desulfovibrio salexigens DSM 2638 8091507 YP_002992748.1 CDS Desal_3158 NC_012881.1 3518310 3518495 R hypothetical protein complement(3518310..3518495) Desulfovibrio salexigens DSM 2638 8091508 YP_002992749.1 CDS Desal_3159 NC_012881.1 3518705 3519247 R PFAM: DSBA oxidoreductase; KEGG: dde:Dde_1263 hypothetical protein; DSBA oxidoreductase complement(3518705..3519247) Desulfovibrio salexigens DSM 2638 8091509 YP_002992750.1 CDS Desal_3160 NC_012881.1 3519458 3520714 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dat:HRM2_42800 GlpQ2; glycerophosphoryl diester phosphodiesterase complement(3519458..3520714) Desulfovibrio salexigens DSM 2638 8091510 YP_002992751.1 CDS Desal_3161 NC_012881.1 3520956 3522110 D PFAM: iron-containing alcohol dehydrogenase; KEGG: mxa:MXAN_2881 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 3520956..3522110 Desulfovibrio salexigens DSM 2638 8091511 YP_002992752.1 CDS Desal_3162 NC_012881.1 3522235 3523035 R PFAM: calcium-binding EF-hand-containing protein; SMART: calcium-binding EF-hand-containing protein; KEGG: dvm:DvMF_0796 calcium-binding EF-hand-containing protein; signal transduction protein with EFhand domain-containing protein complement(3522235..3523035) Desulfovibrio salexigens DSM 2638 8091512 YP_002992753.1 CDS Desal_3163 NC_012881.1 3523274 3524461 D hypothetical protein 3523274..3524461 Desulfovibrio salexigens DSM 2638 8091513 YP_002992754.1 CDS Desal_3164 NC_012881.1 3524501 3524659 D hypothetical protein 3524501..3524659 Desulfovibrio salexigens DSM 2638 8091514 YP_002992755.1 CDS Desal_3165 NC_012881.1 3524924 3525847 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rpb:RPB_4524 phage integrase; integrase family protein 3524924..3525847 Desulfovibrio salexigens DSM 2638 8091515 YP_002992756.1 CDS Desal_3166 NC_012881.1 3525900 3527093 D PFAM: lycopene beta and epsilon cyclase; KEGG: mmw:Mmwyl1_3883 monooxygenase FAD-binding; lycopene beta and epsilon cyclase 3525900..3527093 Desulfovibrio salexigens DSM 2638 8093974 YP_002992757.1 CDS Desal_3167 NC_012881.1 3527090 3528052 R hypothetical protein complement(3527090..3528052) Desulfovibrio salexigens DSM 2638 8093975 YP_002992758.1 CDS Desal_3168 NC_012881.1 3529269 3529637 D hypothetical protein 3529269..3529637 Desulfovibrio salexigens DSM 2638 8093980 YP_002992759.1 CDS Desal_3169 NC_012881.1 3529661 3530098 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: psb:Psyr_3776 cytosine deaminase; zinc-binding CMP/dCMP deaminase complement(3529661..3530098) Desulfovibrio salexigens DSM 2638 8093981 YP_002992760.1 CDS Desal_3170 NC_012881.1 3530170 3531342 R PFAM: major facilitator superfamily MFS_1; KEGG: sfu:Sfum_2013 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3530170..3531342) Desulfovibrio salexigens DSM 2638 8093982 YP_002992761.1 CDS Desal_3171 NC_012881.1 3531470 3532084 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mll4618 hypothetical protein; lysine exporter protein LysE/YggA 3531470..3532084 Desulfovibrio salexigens DSM 2638 8093983 YP_002992762.1 CDS Desal_3172 NC_012881.1 3532188 3532877 R TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: dal:Dalk_4759 aspartate racemase; aspartate racemase complement(3532188..3532877) Desulfovibrio salexigens DSM 2638 8093984 YP_002992763.1 CDS Desal_3173 NC_012881.1 3533056 3533676 D TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: pag:PLES_33651 transporter; nicotinamide mononucleotide transporter PnuC 3533056..3533676 Desulfovibrio salexigens DSM 2638 8093985 YP_002992764.1 CDS Desal_3174 NC_012881.1 3533664 3534188 D KEGG: pcr:Pcryo_1414 NadR-like protein; NadR-like protein 3533664..3534188 Desulfovibrio salexigens DSM 2638 8093986 YP_002992765.1 CDS Desal_3175 NC_012881.1 3534493 3536064 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc0044 substrate-binding periplasmic (PBP) ABC transporter protein; family 5 extracellular solute-binding protein 3534493..3536064 Desulfovibrio salexigens DSM 2638 8093987 YP_002992766.1 CDS Desal_3176 NC_012881.1 3536136 3537110 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cti:RALTA_A2752 dipeptide transport protein 1 (ABC superfamily, membrane component); binding-protein-dependent transport system inner membrane protein 3536136..3537110 Desulfovibrio salexigens DSM 2638 8093988 YP_002992767.1 CDS Desal_3177 NC_012881.1 3537122 3538060 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_3156 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3537122..3538060 Desulfovibrio salexigens DSM 2638 8093989 YP_002992768.1 CDS Desal_3178 NC_012881.1 3538057 3539019 D KEGG: reh:H16_A3295 ABC-type transporter ATPase component: PepT family; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3538057..3539019 Desulfovibrio salexigens DSM 2638 8093990 YP_002992769.1 CDS Desal_3179 NC_012881.1 3539032 3540075 D KEGG: rso:RSc2866 oligopeptide ATP-binding ABC transporter protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3539032..3540075 Desulfovibrio salexigens DSM 2638 8093991 YP_002992770.1 CDS Desal_3180 NC_012881.1 3540144 3541031 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sfu:Sfum_1907 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3540144..3541031) Desulfovibrio salexigens DSM 2638 8093992 YP_002992771.1 CDS Desal_3181 NC_012881.1 3541142 3541576 D TIGRFAM: C_GCAxxG_C_C family protein; KEGG: dvm:DvMF_0510 C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 3541142..3541576 Desulfovibrio salexigens DSM 2638 8093993 YP_002992772.1 CDS Desal_3182 NC_012881.1 3541683 3542078 R KEGG: fph:Fphi_0456 hypothetical protein; hypothetical protein complement(3541683..3542078) Desulfovibrio salexigens DSM 2638 8093994 YP_002992773.1 CDS Desal_3183 NC_012881.1 3542250 3543041 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0626 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(3542250..3543041) Desulfovibrio salexigens DSM 2638 8093995 YP_002992774.1 CDS Desal_3184 NC_012881.1 3543192 3545081 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; KEGG: mpo:Mpop_2964 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 3543192..3545081 Desulfovibrio salexigens DSM 2638 8093996 YP_002992775.1 CDS Desal_3185 NC_012881.1 3545156 3545740 D KEGG: rpa:RPA3389 hypothetical protein; hypothetical protein 3545156..3545740 Desulfovibrio salexigens DSM 2638 8093997 YP_002992776.1 CDS Desal_3186 NC_012881.1 3545926 3547116 D PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; KEGG: dvu:DVU0442 PhoH-related protein; PhoH family protein 3545926..3547116 Desulfovibrio salexigens DSM 2638 8093998 YP_002992777.1 CDS Desal_3187 NC_012881.1 3547183 3547875 R KEGG: dvm:DvMF_0001 chromosomal replication initiator protein DnaA; hypothetical protein complement(3547183..3547875) Desulfovibrio salexigens DSM 2638 8093999 YP_002992778.1 CDS Desal_3188 NC_012881.1 3548083 3549444 R PFAM: chromosomal replication initiator DnaA; chromosomal replication initiator DnaA domain; SMART: chromosomal replication initiator DnaA domain; KEGG: dde:Dde_2320 DnaA family protein; chromosomal replication initiator DnaA complement(3548083..3549444) Desulfovibrio salexigens DSM 2638 8094000 YP_002992779.1 CDS thyX NC_012881.1 3550425 3551168 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(3550425..3551168) Desulfovibrio salexigens DSM 2638 8094001 YP_002992780.1 CDS Desal_3190 NC_012881.1 3551455 3553302 D TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: dde:Dde_1533 GTP-binding protein TypA; GTP-binding protein TypA 3551455..3553302 Desulfovibrio salexigens DSM 2638 8094002 YP_002992781.1 CDS Desal_3191 NC_012881.1 3553409 3555340 R KEGG: dvm:DvMF_2640 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3553409..3555340) Desulfovibrio salexigens DSM 2638 8094003 YP_002992782.1 CDS Desal_3192 NC_012881.1 3555545 3556555 D PFAM: asparaginase/glutaminase; KEGG: dps:DP0994 L-asparaginase; asparaginase/glutaminase 3555545..3556555 Desulfovibrio salexigens DSM 2638 8094004 YP_002992783.1 CDS Desal_3193 NC_012881.1 3556614 3556895 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pin:Ping_1917 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(3556614..3556895) Desulfovibrio salexigens DSM 2638 8091356 YP_002992784.1 CDS Desal_3194 NC_012881.1 3557028 3558533 R PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: dvu:DVU0415 cytosol aminopeptidase; leucyl aminopeptidase complement(3557028..3558533) Desulfovibrio salexigens DSM 2638 8091357 YP_002992785.1 CDS Desal_3195 NC_012881.1 3558569 3559699 R PFAM: extracellular ligand-binding receptor; KEGG: bba:Bd3385 branched-chain amino acid ABC transporter amino acid-binding protein; extracellular ligand-binding receptor complement(3558569..3559699) Desulfovibrio salexigens DSM 2638 8091358 YP_002992786.1 CDS Desal_3196 NC_012881.1 3559805 3561280 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sfu:Sfum_1506 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(3559805..3561280) Desulfovibrio salexigens DSM 2638 8091359 YP_002992787.1 CDS Desal_3197 NC_012881.1 3561427 3562341 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_0800 hypothetical protein; 4Fe-4S ferredoxin 3561427..3562341 Desulfovibrio salexigens DSM 2638 8091360 YP_002992788.1 CDS Desal_3198 NC_012881.1 3562357 3563463 R PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; KEGG: dvu:DVUA0086 response regulator; response regulator receiver modulated metal dependent phosphohydrolase complement(3562357..3563463) Desulfovibrio salexigens DSM 2638 8091361 YP_002992789.1 CDS Desal_3199 NC_012881.1 3563648 3564157 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: amc:MADE_01976 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(3563648..3564157) Desulfovibrio salexigens DSM 2638 8091362 YP_002992790.1 CDS Desal_3200 NC_012881.1 3564215 3565501 R PFAM: protein of unknown function DUF401; KEGG: dde:Dde_2515 hypothetical protein; hypothetical protein complement(3564215..3565501) Desulfovibrio salexigens DSM 2638 8091363 YP_002992791.1 CDS Desal_3201 NC_012881.1 3565631 3567346 R PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: gbm:Gbem_1114 hypothetical protein; hypothetical protein complement(3565631..3567346) Desulfovibrio salexigens DSM 2638 8091364 YP_002992792.1 CDS Desal_3202 NC_012881.1 3567349 3568113 R PFAM: glycosyl transferase family 2; KEGG: geo:Geob_1481 glycosyl transferase family 2; family 2 glycosyl transferase complement(3567349..3568113) Desulfovibrio salexigens DSM 2638 8091365 YP_002992793.1 CDS Desal_3203 NC_012881.1 3568300 3568758 D KEGG: dde:Dde_2314 hypothetical protein; hypothetical protein 3568300..3568758 Desulfovibrio salexigens DSM 2638 8091366 YP_002992794.1 CDS Desal_3204 NC_012881.1 3568771 3569547 D PFAM: amidinotransferase; KEGG: yen:YE2045 hydrolase; dimethylargininase 3568771..3569547 Desulfovibrio salexigens DSM 2638 8092086 YP_002992795.1 CDS Desal_3205 NC_012881.1 3569593 3570117 R hypothetical protein complement(3569593..3570117) Desulfovibrio salexigens DSM 2638 8093904 YP_002992796.1 CDS Desal_3206 NC_012881.1 3570189 3570869 R KEGG: pzu:PHZ_c2091 methyltransferase type 11; hypothetical protein complement(3570189..3570869) Desulfovibrio salexigens DSM 2638 8093905 YP_002992797.1 CDS Desal_3207 NC_012881.1 3571009 3571782 D TIGRFAM: cobalt ABC transporter inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dvl:Dvul_1937 cobalt ABC transporter inner membrane subunit CbiQ; cobalt ABC transporter inner membrane subunit CbiQ 3571009..3571782 Desulfovibrio salexigens DSM 2638 8093906 YP_002992798.1 CDS Desal_3208 NC_012881.1 3571779 3572477 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dal:Dalk_2006 ABC transporter; ABC transporter 3571779..3572477 Desulfovibrio salexigens DSM 2638 8093907 YP_002992799.1 CDS Desal_3209 NC_012881.1 3572502 3572900 D KEGG: vfm:VFMJ11_A1174 lipoprotein; lipoprotein 3572502..3572900 Desulfovibrio salexigens DSM 2638 8093908 YP_002992800.1 CDS Desal_3210 NC_012881.1 3573076 3573423 D KEGG: dde:Dde_0206 hypothetical protein; hypothetical protein 3573076..3573423 Desulfovibrio salexigens DSM 2638 8093909 YP_002992801.1 CDS Desal_3211 NC_012881.1 3573564 3575714 R PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: sfu:Sfum_1838 RNA binding S1 domain protein; RNA binding S1 domain-containing protein complement(3573564..3575714) Desulfovibrio salexigens DSM 2638 8093910 YP_002992802.1 CDS Desal_3212 NC_012881.1 3575835 3576320 R KEGG: geo:Geob_2549 hypothetical protein; hypothetical protein complement(3575835..3576320) Desulfovibrio salexigens DSM 2638 8093911 YP_002992803.1 CDS Desal_3213 NC_012881.1 3576348 3576926 R hypothetical protein complement(3576348..3576926) Desulfovibrio salexigens DSM 2638 8093912 YP_002992804.1 CDS Desal_3214 NC_012881.1 3577057 3577602 D KEGG: rpd:RPD_2001 cytochrome c-type biogenesis protein CycH; hypothetical protein 3577057..3577602 Desulfovibrio salexigens DSM 2638 8093913 YP_002992805.1 CDS Desal_3215 NC_012881.1 3577864 3579294 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: dvl:Dvul_2931 GntR family transcriptional regulator; GntR family transcriptional regulator complement(3577864..3579294) Desulfovibrio salexigens DSM 2638 8093914 YP_002992806.1 CDS Desal_3216 NC_012881.1 3579431 3580141 D PFAM: AzlC family protein; KEGG: dvm:DvMF_2174 AzlC family protein; AzlC family protein 3579431..3580141 Desulfovibrio salexigens DSM 2638 8093915 YP_002992807.1 CDS Desal_3217 NC_012881.1 3580141 3580464 D PFAM: branched-chain amino acid ABC transporter; KEGG: dde:Dde_0159 hypothetical protein; branched-chain amino acid ABC transporter 3580141..3580464 Desulfovibrio salexigens DSM 2638 8093916 YP_002992808.1 CDS Desal_3218 NC_012881.1 3580489 3581043 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dde:Dde_1591 hypothetical protein; metal dependent phosphohydrolase 3580489..3581043 Desulfovibrio salexigens DSM 2638 8093917 YP_002992809.1 CDS Desal_3219 NC_012881.1 3581359 3582921 R PFAM: hydantoinase B/oxoprolinase; KEGG: pca:Pcar_3104 N-methylhydantoinase B/acetone carboxylase, alpha subunit; 5-oxoprolinase (ATP-hydrolyzing) complement(3581359..3582921) Desulfovibrio salexigens DSM 2638 8093918 YP_002992810.1 CDS Desal_3220 NC_012881.1 3582940 3584910 R PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; KEGG: pca:Pcar_3103 N-methylhydantoinase A/acetone carboxylase, beta subunit; 5-oxoprolinase (ATP-hydrolyzing) complement(3582940..3584910) Desulfovibrio salexigens DSM 2638 8093919 YP_002992811.1 CDS Desal_3221 NC_012881.1 3585244 3586218 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dat:HRM2_46640 TRAP-type C4-dicarboxylate transport system periplasmic component; TRAP dicarboxylate transporter- DctP subunit 3585244..3586218 Desulfovibrio salexigens DSM 2638 8093920 YP_002992812.1 CDS Desal_3222 NC_012881.1 3586225 3586710 D PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dat:HRM2_46650 TRAP-type C4-dicarboxylate transport system, small permease component; tripartite ATP-independent periplasmic transporter DctQ component 3586225..3586710 Desulfovibrio salexigens DSM 2638 8093921 YP_002992813.1 CDS Desal_3223 NC_012881.1 3586700 3588037 D TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dat:HRM2_46660 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 3586700..3588037 Desulfovibrio salexigens DSM 2638 8093922 YP_002992814.1 CDS Desal_3224 NC_012881.1 3588107 3588916 R PFAM: xylose isomerase; KEGG: dvm:DvMF_2599 xylose isomerase domain protein TIM barrel; xylose isomerase complement(3588107..3588916) Desulfovibrio salexigens DSM 2638 8093923 YP_002992815.1 CDS Desal_3225 NC_012881.1 3588945 3590681 R PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: dol:Dole_2202 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase complement(3588945..3590681) Desulfovibrio salexigens DSM 2638 8093924 YP_002992816.1 CDS Desal_3226 NC_012881.1 3590647 3591351 R KEGG: dde:Dde_3014 hypothetical protein; hypothetical protein complement(3590647..3591351) Desulfovibrio salexigens DSM 2638 8093925 YP_002992817.1 CDS Desal_3227 NC_012881.1 3591351 3592625 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: dde:Dde_3013 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(3591351..3592625) Desulfovibrio salexigens DSM 2638 8093926 YP_002992818.1 CDS Desal_3228 NC_012881.1 3592918 3594213 R TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: dde:Dde_3011 adenylosuccinate lyase; adenylosuccinate lyase complement(3592918..3594213) Desulfovibrio salexigens DSM 2638 8093927 YP_002992819.1 CDS Desal_3229 NC_012881.1 3594388 3594675 R TIGRFAM: regulatory protein, FmdB family; KEGG: dde:Dde_3010 hypothetical protein; FmdB family regulatory protein complement(3594388..3594675) Desulfovibrio salexigens DSM 2638 8093928 YP_002992820.1 CDS Desal_3230 NC_012881.1 3594822 3594935 R KEGG: dds:Ddes_0093 hypothetical protein; hypothetical protein complement(3594822..3594935) Desulfovibrio salexigens DSM 2638 8093929 YP_002992821.1 CDS Desal_3231 NC_012881.1 3595234 3595752 D KEGG: dvm:DvMF_2111 hypothetical protein; hypothetical protein 3595234..3595752 Desulfovibrio salexigens DSM 2638 8093930 YP_002992822.1 CDS Desal_3232 NC_012881.1 3595810 3596358 R PFAM: NLP/P60 protein; KEGG: dvl:Dvul_0199 NLP/P60 protein; NLP/P60 protein complement(3595810..3596358) Desulfovibrio salexigens DSM 2638 8093931 YP_002992823.1 CDS Desal_3233 NC_012881.1 3596624 3598528 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dvm:DvMF_1518 NADH dehydrogenase (quinone); NADH/ubiquinone/plastoquinone 3596624..3598528 Desulfovibrio salexigens DSM 2638 8093932 YP_002992824.1 CDS Desal_3234 NC_012881.1 3598528 3599376 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: dvl:Dvul_2502 respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 3598528..3599376 Desulfovibrio salexigens DSM 2638 8093933 YP_002992825.1 CDS Desal_3235 NC_012881.1 3599381 3599815 D PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dvl:Dvul_2503 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH dehydrogenase (quinone) 3599381..3599815 Desulfovibrio salexigens DSM 2638 8093934 YP_002992826.1 CDS Desal_3236 NC_012881.1 3599836 3600207 D KEGG: dvm:DvMF_1521 hypothetical protein; hypothetical protein 3599836..3600207 Desulfovibrio salexigens DSM 2638 8093935 YP_002992827.1 CDS Desal_3237 NC_012881.1 3600256 3601332 D PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dvm:DvMF_1522 NADH-ubiquinone oxidoreductase chain 49kDa; NADH-ubiquinone oxidoreductase chain 49kDa 3600256..3601332 Desulfovibrio salexigens DSM 2638 8093936 YP_002992828.1 CDS Desal_3238 NC_012881.1 3601344 3601718 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2506 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 3601344..3601718 Desulfovibrio salexigens DSM 2638 8093937 YP_002992829.1 CDS Desal_3239 NC_012881.1 3601802 3603016 R PFAM: protein of unknown function DUF214; KEGG: sat:SYN_00854 export ABC transporter permease protein; hypothetical protein complement(3601802..3603016) Desulfovibrio salexigens DSM 2638 8093938 YP_002992830.1 CDS Desal_3240 NC_012881.1 3603016 3603690 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sfr:Sfri_1813 ABC transporter; ABC transporter complement(3603016..3603690) Desulfovibrio salexigens DSM 2638 8093939 YP_002992831.1 CDS Desal_3241 NC_012881.1 3603703 3604932 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rlt:Rleg2_1706 efflux transporter RND family, MFP subunit; RND family efflux transporter MFP subunit complement(3603703..3604932) Desulfovibrio salexigens DSM 2638 8093940 YP_002992832.1 CDS Desal_3242 NC_012881.1 3605036 3605260 R SMART: helix-turn-helix domain protein; KEGG: lpc:LPC_3184 transcriptional regulator; XRE family transcriptional regulator complement(3605036..3605260) Desulfovibrio salexigens DSM 2638 8093941 YP_002992833.1 CDS Desal_3243 NC_012881.1 3605270 3605809 R KEGG: dal:Dalk_4885 hypothetical protein; hypothetical protein complement(3605270..3605809) Desulfovibrio salexigens DSM 2638 8093942 YP_002992834.1 CDS Desal_3244 NC_012881.1 3605987 3606865 R PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: dde:Dde_0120 ribosomal large subunit pseudouridine synthase C; pseudouridine synthase complement(3605987..3606865) Desulfovibrio salexigens DSM 2638 8093943 YP_002992835.1 CDS Desal_3245 NC_012881.1 3607073 3608374 R TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dde:Dde_0636 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(3607073..3608374) Desulfovibrio salexigens DSM 2638 8093944 YP_002992836.1 CDS Desal_3246 NC_012881.1 3608379 3608876 R KEGG: dde:Dde_0635 tripartite ATP-independent periplasmic transporters, DctQ component; tripartite ATP-independent periplasmic transporters, DctQ component complement(3608379..3608876) Desulfovibrio salexigens DSM 2638 8093945 YP_002992837.1 CDS Desal_3247 NC_012881.1 3608945 3609964 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dde:Dde_0634 extracellular solute-binding protein; TRAP dicarboxylate transporter- DctP subunit complement(3608945..3609964) Desulfovibrio salexigens DSM 2638 8093946 YP_002992838.1 CDS Desal_3248 NC_012881.1 3610104 3611750 R KEGG: dvm:DvMF_2025 hypothetical protein; hypothetical protein complement(3610104..3611750) Desulfovibrio salexigens DSM 2638 8093947 YP_002992839.1 CDS Desal_3249 NC_012881.1 3612134 3613390 D PFAM: Fmu (Sun) domain protein; KEGG: dde:Dde_0122 NOL1/NOP2/sun family protein; Fmu (Sun) domain-containing protein 3612134..3613390 Desulfovibrio salexigens DSM 2638 8093948 YP_002992840.1 CDS Desal_3250 NC_012881.1 3613413 3614189 D PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: dde:Dde_3502 fructose-bisphosphate aldolase; fructose-bisphosphate aldolase 3613413..3614189 Desulfovibrio salexigens DSM 2638 8093949 YP_002992841.1 CDS Desal_3251 NC_012881.1 3614640 3615152 D PFAM: adenylate cyclase; KEGG: similar to F35D11.4; adenylate cyclase 3614640..3615152 Desulfovibrio salexigens DSM 2638 8093952 YP_002992842.1 CDS Desal_3252 NC_012881.1 3615307 3615624 R PFAM: antibiotic biosynthesis monooxygenase; KEGG: vfi:VF_1211 hypothetical protein; antibiotic biosynthesis monooxygenase complement(3615307..3615624) Desulfovibrio salexigens DSM 2638 8093953 YP_002992843.1 CDS Desal_3253 NC_012881.1 3615660 3616511 R SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1303 hypothetical protein; AraC family transcriptional regulator complement(3615660..3616511) Desulfovibrio salexigens DSM 2638 8093954 YP_002992844.1 CDS Desal_3254 NC_012881.1 3616551 3618221 R KEGG: dvm:DvMF_0922 hypothetical protein; hypothetical protein complement(3616551..3618221) Desulfovibrio salexigens DSM 2638 8093955 YP_002992845.1 CDS Desal_3255 NC_012881.1 3618809 3619264 D PFAM: GCN5-related N-acetyltransferase; KEGG: vvu:VV1_2193 hypothetical protein; N-acetyltransferase GCN5 3618809..3619264 Desulfovibrio salexigens DSM 2638 8093957 YP_002992846.1 CDS Desal_3256 NC_012881.1 3619414 3620106 D PFAM: glutamine amidotransferase class-I; KEGG: xau:Xaut_4097 glutamine amidotransferase class-I; glutamine amidotransferase 3619414..3620106 Desulfovibrio salexigens DSM 2638 8093958 YP_002992847.1 CDS Desal_3257 NC_012881.1 3620103 3620918 R PFAM: N-acetyltransferase; KEGG: vpa:VPA0072 N-hydroxyarylamine O-acetyltransferase; N-acetyltransferase complement(3620103..3620918) Desulfovibrio salexigens DSM 2638 8093959 YP_002992848.1 CDS Desal_3258 NC_012881.1 3621253 3621771 D KEGG: sfu:Sfum_2627 hypothetical protein; hypothetical protein 3621253..3621771 Desulfovibrio salexigens DSM 2638 8093960 YP_002992849.1 CDS Desal_3259 NC_012881.1 3621808 3622884 R PFAM: methyltransferase type 11; methyltransferase type 12; methyltransferase; KEGG: dat:HRM2_40940 UbiE5; methyltransferase type 11 complement(3621808..3622884) Desulfovibrio salexigens DSM 2638 8093961 YP_002992850.1 CDS Desal_3260 NC_012881.1 3623088 3624233 D PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_0278 histidine kinase; histidine kinase 3623088..3624233 Desulfovibrio salexigens DSM 2638 8093962 YP_002992851.1 CDS Desal_3261 NC_012881.1 3624237 3624593 D KEGG: noc:Noc_1472 hypothetical protein; hypothetical protein 3624237..3624593 Desulfovibrio salexigens DSM 2638 8093963 YP_002992852.1 CDS Desal_3262 NC_012881.1 3624926 3625933 R PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; KEGG: dps:DP0884 two-component system response regulator; response regulator receiver modulated metal dependent phosphohydrolase complement(3624926..3625933) Desulfovibrio salexigens DSM 2638 8093966 YP_002992853.1 CDS Desal_3263 NC_012881.1 3625937 3629188 R KEGG: dps:DP2292 two-component system sensory/regulatory protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; multi-sensor hybrid histidine kinase complement(3625937..3629188) Desulfovibrio salexigens DSM 2638 8093967 YP_002992854.1 CDS Desal_3264 NC_012881.1 3629774 3630079 D hypothetical protein 3629774..3630079 Desulfovibrio salexigens DSM 2638 8093970 YP_002992855.1 CDS Desal_3265 NC_012881.1 3630229 3630564 D TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: nis:NIS_0865 alkylphosphonate uptake protein PhnA; alkylphosphonate utilization operon protein PhnA 3630229..3630564 Desulfovibrio salexigens DSM 2638 8093971 YP_002992856.1 CDS Desal_3266 NC_012881.1 3630823 3632967 D PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dde:Dde_3295 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 3630823..3632967 Desulfovibrio salexigens DSM 2638 8093972 YP_002992857.1 CDS Desal_3267 NC_012881.1 3633210 3635351 D PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dde:Dde_3295 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor 3633210..3635351 Desulfovibrio salexigens DSM 2638 8092922 YP_002992858.1 CDS Desal_3268 NC_012881.1 3635408 3636253 R PFAM: aldo/keto reductase; KEGG: aci:ACIAD3281 2,5-diketo-D-gluconate reductase; 2,5-didehydrogluconate reductase complement(3635408..3636253) Desulfovibrio salexigens DSM 2638 8094278 YP_002992859.1 CDS Desal_3269 NC_012881.1 3636269 3636607 R PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: dde:Dde_3099 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA-(protein)-cysteine S-methyltransferase complement(3636269..3636607) Desulfovibrio salexigens DSM 2638 8094279 YP_002992860.1 CDS Desal_3270 NC_012881.1 3636712 3637725 D hypothetical protein 3636712..3637725 Desulfovibrio salexigens DSM 2638 8094280 YP_002992861.1 CDS Desal_3271 NC_012881.1 3637824 3638639 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dvl:Dvul_0479 AraC family transcriptional regulator; AraC family transcriptional regulator 3637824..3638639 Desulfovibrio salexigens DSM 2638 8094281 YP_002992862.1 CDS Desal_3272 NC_012881.1 3638636 3639028 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gur:Gura_1324 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein complement(3638636..3639028) Desulfovibrio salexigens DSM 2638 8094282 YP_002992863.1 CDS Desal_3273 NC_012881.1 3639170 3640117 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvm:DvMF_1316 protein of unknown function DUF6 transmembrane; hypothetical protein 3639170..3640117 Desulfovibrio salexigens DSM 2638 8094283 YP_002992864.1 CDS Desal_3274 NC_012881.1 3640203 3641324 D PFAM: basic membrane lipoprotein; KEGG: bba:Bd0445 ABC-type transport system substrate-binding protein; basic membrane lipoprotein 3640203..3641324 Desulfovibrio salexigens DSM 2638 8094284 YP_002992865.1 CDS Desal_3275 NC_012881.1 3641376 3643700 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sat:SYN_00226 signal transduction histidine kinase; histidine kinase 3641376..3643700 Desulfovibrio salexigens DSM 2638 8094285 YP_002992866.1 CDS Desal_3276 NC_012881.1 3643981 3644313 R PFAM: hypothetical protein; KEGG: pmy:Pmen_4228 hypothetical protein; hypothetical protein complement(3643981..3644313) Desulfovibrio salexigens DSM 2638 8094286 YP_002992867.1 CDS Desal_3277 NC_012881.1 3644915 3645559 D PFAM: pseudouridine synthase; KEGG: dps:DP3109 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase 3644915..3645559 Desulfovibrio salexigens DSM 2638 8094287 YP_002992868.1 CDS Desal_3278 NC_012881.1 3645688 3648015 R PFAM: glutamate synthase alpha subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dvm:DvMF_2389 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase alpha subunit domain-containing protein complement(3645688..3648015) Desulfovibrio salexigens DSM 2638 8094288 YP_002992869.1 CDS Desal_3279 NC_012881.1 3648045 3649679 R PFAM: ferredoxin-dependent glutamate synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvm:DvMF_2388 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase complement(3648045..3649679) Desulfovibrio salexigens DSM 2638 8094289 YP_002992870.1 CDS Desal_3280 NC_012881.1 3649643 3650779 R KEGG: dvm:DvMF_2387 glutamate synthase (NADPH); glutamate synthase complement(3649643..3650779) Desulfovibrio salexigens DSM 2638 8094290 YP_002992871.1 CDS Desal_3281 NC_012881.1 3651667 3651966 D hypothetical protein 3651667..3651966 Desulfovibrio salexigens DSM 2638 8094291 YP_002992872.1 CDS Desal_3282 NC_012881.1 3651968 3652594 R PFAM: regulatory protein TetR; KEGG: dol:Dole_0167 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3651968..3652594) Desulfovibrio salexigens DSM 2638 8094292 YP_002992873.1 CDS Desal_3283 NC_012881.1 3652726 3653916 R KEGG: dvl:Dvul_2450 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(3652726..3653916) Desulfovibrio salexigens DSM 2638 8094293 YP_002992874.1 CDS greA NC_012881.1 3654326 3654808 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 3654326..3654808 Desulfovibrio salexigens DSM 2638 8094294 YP_002992875.1 CDS Desal_3285 NC_012881.1 3654921 3655679 D KEGG: dps:DP3108 hypothetical protein; hypothetical protein 3654921..3655679 Desulfovibrio salexigens DSM 2638 8094295 YP_002992876.1 CDS Desal_3286 NC_012881.1 3655762 3656196 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pfo:Pfl01_4226 hypothetical protein; hypothetical protein 3655762..3656196 Desulfovibrio salexigens DSM 2638 8094296 YP_002992877.1 CDS Desal_3287 NC_012881.1 3656221 3657408 D PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: dde:Dde_2687 PAS/PAC sensor signal transduction histidine kinase; histidine kinase 3656221..3657408 Desulfovibrio salexigens DSM 2638 8094297 YP_002992878.1 CDS Desal_3288 NC_012881.1 3657424 3658056 D PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: sun:SUN_0864 PAP2 family phosphoesterase; PA-phosphatase like phosphoesterase 3657424..3658056 Desulfovibrio salexigens DSM 2638 8094298 YP_002992879.1 CDS Desal_3289 NC_012881.1 3658176 3661313 R TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: cvi:CV_0434 acriflavin resistance protein D; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3658176..3661313) Desulfovibrio salexigens DSM 2638 8094299 YP_002992880.1 CDS Desal_3290 NC_012881.1 3661378 3662553 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sfu:Sfum_1458 efflux transporter RND family, MFP subunit; RND family efflux transporter MFP subunit complement(3661378..3662553) Desulfovibrio salexigens DSM 2638 8094300 YP_002992881.1 CDS Desal_3291 NC_012881.1 3662704 3663006 R hypothetical protein complement(3662704..3663006) Desulfovibrio salexigens DSM 2638 8094301 YP_002992882.1 CDS Desal_3292 NC_012881.1 3663165 3664403 R KEGG: hch:HCH_06018 response regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase complement(3663165..3664403) Desulfovibrio salexigens DSM 2638 8094302 YP_002992883.1 CDS Desal_3293 NC_012881.1 3664513 3664932 R PFAM: DGC domain protein; KEGG: sfu:Sfum_3599 hypothetical protein; DGC domain-containing protein complement(3664513..3664932) Desulfovibrio salexigens DSM 2638 8094303 YP_002992884.1 CDS Desal_3294 NC_012881.1 3665060 3666196 R PFAM: permease; KEGG: dde:Dde_2777 permease-like; permease complement(3665060..3666196) Desulfovibrio salexigens DSM 2638 8094304 YP_002992885.1 CDS Desal_3295 NC_012881.1 3666283 3666612 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dvm:DvMF_2281 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(3666283..3666612) Desulfovibrio salexigens DSM 2638 8094305 YP_002992886.1 CDS Desal_3296 NC_012881.1 3666746 3667249 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(3666746..3667249) Desulfovibrio salexigens DSM 2638 8094306 YP_002992887.1 CDS Desal_3297 NC_012881.1 3667505 3668143 D TIGRFAM: hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: dvm:DvMF_0512 conserved integral membrane protein; hypothetical protein 3667505..3668143 Desulfovibrio salexigens DSM 2638 8094307 YP_002992888.1 CDS Desal_3298 NC_012881.1 3668258 3669358 D KEGG: dde:Dde_3311 ABC-type sugar transport system, periplasmic component; sugar ABC transporter substrate-binding protein 3668258..3669358 Desulfovibrio salexigens DSM 2638 8094308 YP_002992889.1 CDS Desal_3299 NC_012881.1 3669371 3672046 D KEGG: dvl:Dvul_2248 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3669371..3672046 Desulfovibrio salexigens DSM 2638 8094309 YP_002992890.1 CDS Desal_3300 NC_012881.1 3672049 3672960 R KEGG: dal:Dalk_0545 response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase complement(3672049..3672960) Desulfovibrio salexigens DSM 2638 8094310 YP_002992891.1 CDS Desal_3301 NC_012881.1 3672966 3677978 R KEGG: dat:HRM2_43550 two-component system sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; Hpt domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; response regulator receiver; PAS domain containing protein; multi-sensor hybrid histidine kinase complement(3672966..3677978) Desulfovibrio salexigens DSM 2638 8094311 YP_002992892.1 CDS Desal_3303 NC_012881.1 3680291 3681412 D TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dde:Dde_1553 L-alanine dehydrogenase; alanine dehydrogenase 3680291..3681412 Desulfovibrio salexigens DSM 2638 8094313 YP_002992893.1 CDS Desal_3304 NC_012881.1 3681657 3683051 D TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: dps:DP1286 sodium/alanine symporter; amino acid carrier protein 3681657..3683051 Desulfovibrio salexigens DSM 2638 8094314 YP_002992894.1 CDS Desal_3305 NC_012881.1 3683163 3684311 D KEGG: dde:Dde_1547 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 3683163..3684311 Desulfovibrio salexigens DSM 2638 8094315 YP_002992895.1 CDS Desal_3306 NC_012881.1 3684858 3685712 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_45420 PotC1; binding-protein-dependent transport system inner membrane protein complement(3684858..3685712) Desulfovibrio salexigens DSM 2638 8094316 YP_002992896.1 CDS Desal_3307 NC_012881.1 3685709 3686563 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_45430 PotB1; binding-protein-dependent transport system inner membrane protein complement(3685709..3686563) Desulfovibrio salexigens DSM 2638 8094317 YP_002992897.1 CDS Desal_3308 NC_012881.1 3686566 3687648 R PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: dat:HRM2_45440 PotA1; ABC transporter complement(3686566..3687648) Desulfovibrio salexigens DSM 2638 8094318 YP_002992898.1 CDS Desal_3309 NC_012881.1 3687735 3688793 R PFAM: extracellular solute-binding protein family 1; KEGG: dat:HRM2_45450 PotD; extracellular solute-binding protein complement(3687735..3688793) Desulfovibrio salexigens DSM 2638 8094399 YP_002992899.1 CDS Desal_3310 NC_012881.1 3689052 3689147 R hypothetical protein complement(3689052..3689147) Desulfovibrio salexigens DSM 2638 8091706 YP_002992900.1 CDS Desal_3311 NC_012881.1 3689150 3690658 R PFAM: sodium:neurotransmitter symporter; KEGG: dat:HRM2_44940 Na+-dependent transporter; sodium:neurotransmitter symporter complement(3689150..3690658) Desulfovibrio salexigens DSM 2638 8091707 YP_002992901.1 CDS Desal_3312 NC_012881.1 3691177 3692748 D PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; SMART: metal-dependent phosphohydrolase HD region; response regulator receiver; KEGG: dde:Dde_3114 metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 3691177..3692748 Desulfovibrio salexigens DSM 2638 8091708 YP_002992902.1 CDS Desal_3313 NC_012881.1 3692751 3694694 D KEGG: dvl:Dvul_2248 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3692751..3694694 Desulfovibrio salexigens DSM 2638 8091709 YP_002992903.1 CDS Desal_3314 NC_012881.1 3694978 3696582 D PFAM: sulfate transporter; Sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: dps:DP0967 sulfate permease (SulP); sulfate transporter 3694978..3696582 Desulfovibrio salexigens DSM 2638 8091710 YP_002992904.1 CDS Desal_3315 NC_012881.1 3696686 3697525 R PFAM: GCN5-related N-acetyltransferase; KEGG: pin:Ping_1907 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3696686..3697525) Desulfovibrio salexigens DSM 2638 8091711 YP_002992905.1 CDS Desal_3316 NC_012881.1 3697515 3698828 R KEGG: dde:Dde_0189 L-lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(3697515..3698828) Desulfovibrio salexigens DSM 2638 8091712 YP_002992906.1 CDS Desal_3317 NC_012881.1 3698843 3699574 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_3744 ATPase; ABC transporter complement(3698843..3699574) Desulfovibrio salexigens DSM 2638 8091713 YP_002992907.1 CDS Desal_3318 NC_012881.1 3699584 3700240 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_3743 amino acid ABC transporter permease; polar amino acid ABC transporter permease complement(3699584..3700240) Desulfovibrio salexigens DSM 2638 8091714 YP_002992908.1 CDS Desal_3319 NC_012881.1 3700294 3701079 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dde:Dde_3742 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(3700294..3701079) Desulfovibrio salexigens DSM 2638 8091715 YP_002992909.1 CDS Desal_3320 NC_012881.1 3701403 3702620 R KEGG: dde:Dde_3740 LuxR family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold domain protein; SMART: regulatory protein LuxR; PAS domain containing protein; LuxR family transcriptional regulator complement(3701403..3702620) Desulfovibrio salexigens DSM 2638 8091716 YP_002992910.1 CDS Desal_3321 NC_012881.1 3703036 3703719 D PFAM: protein of unknown function DUF554; KEGG: dvl:Dvul_1184 hypothetical protein; hypothetical protein 3703036..3703719 Desulfovibrio salexigens DSM 2638 8091718 YP_002992911.1 CDS Desal_3322 NC_012881.1 3703792 3705990 D PFAM: Stage II sporulation E family protein; histidine kinase HAMP region domain protein; SMART: protein phosphatase 2C domain protein; histidine kinase HAMP region domain protein; KEGG: dal:Dalk_1872 protein serine/threonine phosphatase; protein serine/threonine phosphatase 3703792..3705990 Desulfovibrio salexigens DSM 2638 8091719 YP_002992912.1 CDS Desal_3323 NC_012881.1 3705987 3706844 D KEGG: dps:DP1626 hypothetical protein; hypothetical protein 3705987..3706844 Desulfovibrio salexigens DSM 2638 8091720 YP_002992913.1 CDS Desal_3324 NC_012881.1 3706846 3707445 D PFAM: hypothetical protein; KEGG: rfr:Rfer_3142 hypothetical protein; hypothetical protein 3706846..3707445 Desulfovibrio salexigens DSM 2638 8091721 YP_002992914.1 CDS Desal_3325 NC_012881.1 3707479 3708774 R KEGG: aha:AHA_0488 HD-GYP domain-containing protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(3707479..3708774) Desulfovibrio salexigens DSM 2638 8091722 YP_002992915.1 CDS Desal_3326 NC_012881.1 3708798 3709949 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sat:SYN_01373 hydrogenase transcriptional regulatory protein; response regulator receiver protein complement(3708798..3709949) Desulfovibrio salexigens DSM 2638 8091723 YP_002992916.1 CDS rocD NC_012881.1 3710190 3711389 D TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: ret:RHE_CH03852 ornithine--oxo-acid transaminase; ornithine--oxo-acid transaminase 3710190..3711389 Desulfovibrio salexigens DSM 2638 8091724 YP_002992917.1 CDS Desal_3328 NC_012881.1 3711446 3715573 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: pat:Patl_3543 Hpt sensor hybrid histidine kinase; histidine kinase 3711446..3715573 Desulfovibrio salexigens DSM 2638 8091725 YP_002992918.1 CDS Desal_3329 NC_012881.1 3715574 3716083 D KEGG: dvl:Dvul_0098 hypothetical protein; hypothetical protein 3715574..3716083 Desulfovibrio salexigens DSM 2638 8091726 YP_002992919.1 CDS Desal_3330 NC_012881.1 3716110 3716526 R PFAM: protein of unknown function UPF0047; KEGG: bra:BRADO6457 hypothetical protein; hypothetical protein complement(3716110..3716526) Desulfovibrio salexigens DSM 2638 8091727 YP_002992920.1 CDS Desal_3331 NC_012881.1 3716665 3717084 D hypothetical protein 3716665..3717084 Desulfovibrio salexigens DSM 2638 8091728 YP_002992921.1 CDS Desal_3332 NC_012881.1 3717126 3719285 R KEGG: cak:Caul_0720 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; ATP-binding region ATPase domain protein; PAS/PAC sensor hybrid histidine kinase complement(3717126..3719285) Desulfovibrio salexigens DSM 2638 8091729 YP_002992922.1 CDS Desal_3333 NC_012881.1 3719411 3720448 R PFAM: Domain of unkown function DUF1786 pyruvate format-lyase activating enzyme; KEGG: dvl:Dvul_0572 hypothetical protein; hypothetical protein complement(3719411..3720448) Desulfovibrio salexigens DSM 2638 8091730 YP_002992923.1 CDS Desal_3334 NC_012881.1 3720506 3721372 D PFAM: PGAP1 family protein; KEGG: dvm:DvMF_0506 PGAP1 family protein; PGAP1 family protein 3720506..3721372 Desulfovibrio salexigens DSM 2638 8091731 YP_002992924.1 CDS Desal_3335 NC_012881.1 3721423 3723012 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dat:HRM2_36540 signal transduction protein; response regulator receiver protein complement(3721423..3723012) Desulfovibrio salexigens DSM 2638 8091732 YP_002992925.1 CDS Desal_3336 NC_012881.1 3723049 3723507 R KEGG: dvl:Dvul_2679 chemotaxis protein CheX; chemotaxis protein CheX complement(3723049..3723507) Desulfovibrio salexigens DSM 2638 8091733 YP_002992926.1 CDS Desal_3337 NC_012881.1 3723735 3724976 D PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: dol:Dole_2117 Na+ dependent nucleoside transporter; Na+ dependent nucleoside transporter domain-containing protein 3723735..3724976 Desulfovibrio salexigens DSM 2638 8091734 YP_002992927.1 CDS Desal_3338 NC_012881.1 3725000 3726748 D PFAM: chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dat:HRM2_16400 EriC1; chloride channel core 3725000..3726748 Desulfovibrio salexigens DSM 2638 8091735 YP_002992928.1 CDS Desal_3339 NC_012881.1 3726759 3726938 R hypothetical protein complement(3726759..3726938) Desulfovibrio salexigens DSM 2638 8091736 YP_002992929.1 CDS Desal_3340 NC_012881.1 3727150 3728217 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dvm:DvMF_0966 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3727150..3728217 Desulfovibrio salexigens DSM 2638 8091737 YP_002992930.1 CDS Desal_3341 NC_012881.1 3728273 3729238 R PFAM: auxin efflux carrier; KEGG: sfr:Sfri_1044 auxin efflux carrier; auxin efflux carrier complement(3728273..3729238) Desulfovibrio salexigens DSM 2638 8091738 YP_002992931.1 CDS Desal_3342 NC_012881.1 3729378 3729962 D hypothetical protein 3729378..3729962 Desulfovibrio salexigens DSM 2638 8091739 YP_002992932.1 CDS Desal_3343 NC_012881.1 3729965 3730546 R PFAM: pentapeptide repeat protein; KEGG: dps:DP2447 McbG protein; pentapeptide repeat-containing protein complement(3729965..3730546) Desulfovibrio salexigens DSM 2638 8091740 YP_002992933.1 CDS Desal_3344 NC_012881.1 3736847 3738025 R PFAM: sodium/sulfate symporter; citrate transporter; KEGG: shn:Shewana3_0451 anion transporter; sodium/sulfate symporter complement(3736847..3738025) Desulfovibrio salexigens DSM 2638 8091746 YP_002992934.1 CDS Desal_3345 NC_012881.1 3738240 3741767 D KEGG: dvl:Dvul_1715 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 3738240..3741767 Desulfovibrio salexigens DSM 2638 8091747 YP_002992935.1 CDS Desal_3346 NC_012881.1 3741830 3742216 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: dvm:DvMF_0129 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; 6-pyruvoyl-tetrahydropterin synthase 3741830..3742216 Desulfovibrio salexigens DSM 2638 8091748 YP_002992936.1 CDS Desal_3347 NC_012881.1 3742218 3742685 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 3742218..3742685 Desulfovibrio salexigens DSM 2638 8091749 YP_002992937.1 CDS Desal_3348 NC_012881.1 3742822 3743250 D KEGG: dde:Dde_1722 anti-sigma regulatory factor (serine/threonine protein kinase); anti-sigma regulatory factor, serine/threonine protein kinase 3742822..3743250 Desulfovibrio salexigens DSM 2638 8091750 YP_002992938.1 CDS Desal_3349 NC_012881.1 3743235 3743564 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dde:Dde_1719 anti-anti-sigma regulatory factor, SpoIIAA; anti-sigma-factor antagonist 3743235..3743564 Desulfovibrio salexigens DSM 2638 8091751 YP_002992939.1 CDS Desal_3350 NC_012881.1 3743593 3744705 D PFAM: protein of unknown function DUF342; KEGG: dde:Dde_1718 hypothetical protein; hypothetical protein 3743593..3744705 Desulfovibrio salexigens DSM 2638 8091752 YP_002992940.1 CDS Desal_3351 NC_012881.1 3744713 3745468 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_1717 chemotaxis protein PomA; cyclic nucleotide-binding protein 3744713..3745468 Desulfovibrio salexigens DSM 2638 8091753 YP_002992941.1 CDS Desal_3352 NC_012881.1 3745484 3746230 D PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_1716 chemotaxis protein PomB; OmpA/MotB domain-containing protein 3745484..3746230 Desulfovibrio salexigens DSM 2638 8091754 YP_002992942.1 CDS Desal_3353 NC_012881.1 3746240 3747910 D KEGG: dde:Dde_1715 CgeB family protein; CgeB family protein 3746240..3747910 Desulfovibrio salexigens DSM 2638 8091755 YP_002992943.1 CDS Desal_3354 NC_012881.1 3747989 3748198 R TIGRFAM: regulatory protein, FmdB family; KEGG: dal:Dalk_0219 regulatory protein, FmdB family; FmdB family regulatory protein complement(3747989..3748198) Desulfovibrio salexigens DSM 2638 8091756 YP_002992944.1 CDS Desal_3355 NC_012881.1 3748460 3750166 R PFAM: ATP-binding region ATPase domain protein; CHASE4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gme:Gmet_0077 histidine kinase; histidine kinase complement(3748460..3750166) Desulfovibrio salexigens DSM 2638 8091757 YP_002992945.1 CDS cysS NC_012881.1 3750276 3751733 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(3750276..3751733) Desulfovibrio salexigens DSM 2638 8091758 YP_002992946.1 CDS Desal_3357 NC_012881.1 3751743 3752630 R KEGG: mrd:Mrad2831_2771 hypothetical protein; hypothetical protein complement(3751743..3752630) Desulfovibrio salexigens DSM 2638 8091759 YP_002992947.1 CDS Desal_3358 NC_012881.1 3752640 3753830 R TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: dde:Dde_1726 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(3752640..3753830) Desulfovibrio salexigens DSM 2638 8091760 YP_002992948.1 CDS Desal_3359 NC_012881.1 3754322 3755077 R PFAM: protein of unknown function DUF164; KEGG: dde:Dde_1728 hypothetical protein; hypothetical protein complement(3754322..3755077) Desulfovibrio salexigens DSM 2638 8091762 YP_002992949.1 CDS Desal_3360 NC_012881.1 3755205 3756014 R PFAM: protein of unknown function DUF34; KEGG: dds:Ddes_1250 protein of unknown function DUF34; hypothetical protein complement(3755205..3756014) Desulfovibrio salexigens DSM 2638 8091763 YP_002992950.1 CDS Desal_3361 NC_012881.1 3756435 3756941 R TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: dde:Dde_3605 bifunctional ADP-heptose synthase; rfaE bifunctional protein complement(3756435..3756941) Desulfovibrio salexigens DSM 2638 8091765 YP_002992951.1 CDS Desal_3362 NC_012881.1 3757134 3757784 D PFAM: abortive infection protein; KEGG: dal:Dalk_0566 abortive infection protein; abortive infection protein 3757134..3757784 Desulfovibrio salexigens DSM 2638 8091766 YP_002992952.1 CDS Desal_3363 NC_012881.1 3758174 3758944 R PFAM: protein of unknown function UPF0153; KEGG: dvl:Dvul_2824 hypothetical protein; hypothetical protein complement(3758174..3758944) Desulfovibrio salexigens DSM 2638 8091767 YP_002992953.1 CDS Desal_3364 NC_012881.1 3758965 3760623 R PFAM: glycosyl transferase family 2; KEGG: dde:Dde_1487 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase complement(3758965..3760623) Desulfovibrio salexigens DSM 2638 8091768 YP_002992954.1 CDS Desal_3365 NC_012881.1 3760818 3761309 R KEGG: dps:DP0447 hypothetical protein; hypothetical protein complement(3760818..3761309) Desulfovibrio salexigens DSM 2638 8091769 YP_002992955.1 CDS Desal_3366 NC_012881.1 3761404 3762300 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dde:Dde_0349 LysR family transcriptional regulator; LysR family transcriptional regulator 3761404..3762300 Desulfovibrio salexigens DSM 2638 8091770 YP_002992956.1 CDS Desal_3367 NC_012881.1 3762290 3764365 R PFAM: glycosyl transferase group 1; polysaccharide deacetylase; KEGG: sbc:SbBS512_A0260 polysaccharide deacetylase family protein; group 1 glycosyl transferase complement(3762290..3764365) Desulfovibrio salexigens DSM 2638 8091771 YP_002992957.1 CDS Desal_3368 NC_012881.1 3764443 3766224 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvu:DVU0751 His/Glu/Gln/Arg/opine ABC transporter permease; polar amino acid ABC transporter permease complement(3764443..3766224) Desulfovibrio salexigens DSM 2638 8091772 YP_002992958.1 CDS Desal_3369 NC_012881.1 3766305 3767126 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dde:Dde_2764 extracellular solute-binding protein; family 3 extracellular solute-binding protein complement(3766305..3767126) Desulfovibrio salexigens DSM 2638 8091773 YP_002992959.1 CDS Desal_3370 NC_012881.1 3767288 3768016 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dvl:Dvul_2217 ABC transporter; ABC transporter complement(3767288..3768016) Desulfovibrio salexigens DSM 2638 8091774 YP_002992960.1 CDS Desal_3371 NC_012881.1 3768479 3769906 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: dde:Dde_1405 two component Fis family transcriptional regulator; Fis family transcriptional regulator 3768479..3769906 Desulfovibrio salexigens DSM 2638 8091775 YP_002992961.1 CDS Desal_3372 NC_012881.1 3769981 3771036 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: oan:Oant_1465 ABC transporter; ABC transporter complement(3769981..3771036) Desulfovibrio salexigens DSM 2638 8091776 YP_002992962.1 CDS Desal_3373 NC_012881.1 3771066 3772781 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3625 ABC ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(3771066..3772781) Desulfovibrio salexigens DSM 2638 8091777 YP_002992963.1 CDS Desal_3374 NC_012881.1 3772785 3773753 R PFAM: extracellular solute-binding protein family 1; KEGG: rhi:NGR_c19550 solute-binding component of ABC transporter; extracellular solute-binding protein complement(3772785..3773753) Desulfovibrio salexigens DSM 2638 8091778 YP_002992964.1 CDS Desal_3375 NC_012881.1 3774251 3776053 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: dvm:DvMF_1869 methyl-accepting chemotaxis sensory transducer with cache sensor; methyl-accepting chemotaxis sensory transducer with Cache sensor 3774251..3776053 Desulfovibrio salexigens DSM 2638 8091779 YP_002992965.1 CDS Desal_3376 NC_012881.1 3776128 3777405 R KEGG: dvm:DvMF_2224 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase complement(3776128..3777405) Desulfovibrio salexigens DSM 2638 8091780 YP_002992966.1 CDS Desal_3377 NC_012881.1 3777520 3777864 R hypothetical protein complement(3777520..3777864) Desulfovibrio salexigens DSM 2638 8091781 YP_002992967.1 CDS Desal_3378 NC_012881.1 3778015 3778494 D PFAM: CinA domain protein; KEGG: ajs:Ajs_0354 CinA domain-containing protein; CinA domain-containing protein 3778015..3778494 Desulfovibrio salexigens DSM 2638 8091782 YP_002992968.1 CDS Desal_3380 NC_012881.1 3779799 3780353 D TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: dal:Dalk_2946 2'-5' RNA ligase; 2'-5' RNA ligase 3779799..3780353 Desulfovibrio salexigens DSM 2638 8091784 YP_002992969.1 CDS Desal_3381 NC_012881.1 3780413 3781762 R KEGG: dvm:DvMF_2121 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; HtrA2 peptidase complement(3780413..3781762) Desulfovibrio salexigens DSM 2638 8091785 YP_002992970.1 CDS Desal_3382 NC_012881.1 3781768 3782616 R PFAM: peptidase M48 Ste24p; KEGG: dvu:DVU2494 M48 family peptidase; peptidase M48 Ste24p complement(3781768..3782616) Desulfovibrio salexigens DSM 2638 8091786 YP_002992971.1 CDS Desal_3383 NC_012881.1 3782730 3785051 R KEGG: dde:Dde_3113 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3782730..3785051) Desulfovibrio salexigens DSM 2638 8091926 YP_002992972.1 CDS Desal_3384 NC_012881.1 3785301 3788864 D PFAM: hemolysin-type calcium-binding region; KEGG: sme:SM_b20079 hemolysin-adenlyate cyclase protein; hemolysin-type calcium-binding region 3785301..3788864 Desulfovibrio salexigens DSM 2638 8094400 YP_002992973.1 CDS Desal_3385 NC_012881.1 3788908 3789168 R hypothetical protein complement(3788908..3789168) Desulfovibrio salexigens DSM 2638 8094401 YP_002992974.1 CDS Desal_3386 NC_012881.1 3789165 3789410 R hypothetical protein complement(3789165..3789410) Desulfovibrio salexigens DSM 2638 8094402 YP_002992975.1 CDS Desal_3387 NC_012881.1 3789442 3790779 R PFAM: TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: dde:Dde_3006 response regulator receiver domain-containing protein; hypothetical protein complement(3789442..3790779) Desulfovibrio salexigens DSM 2638 8094403 YP_002992976.1 CDS Desal_3388 NC_012881.1 3790815 3791570 R PFAM: beta-lactamase domain protein; KEGG: sfu:Sfum_1656 beta-lactamase domain protein; beta-lactamase complement(3790815..3791570) Desulfovibrio salexigens DSM 2638 8094404 YP_002992977.1 CDS Desal_3389 NC_012881.1 3791591 3792472 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: dde:Dde_0508 signal peptide peptidase A; signal peptide peptidase SppA, 36K type complement(3791591..3792472) Desulfovibrio salexigens DSM 2638 8094405 YP_002992978.1 CDS rpsA NC_012881.1 3792459 3794204 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3792459..3794204) Desulfovibrio salexigens DSM 2638 8094406 YP_002992979.1 CDS Desal_3391 NC_012881.1 3794559 3795224 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: sfu:Sfum_2904 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU complement(3794559..3795224) Desulfovibrio salexigens DSM 2638 8094407 YP_002992980.1 CDS Desal_3392 NC_012881.1 3795282 3796043 R KEGG: dde:Dde_2386 phosphate ABC transporter permease; TIGRFAM: phosphate ABC transporter ATPase subunit; PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; phosphate ABC transporter ATPase complement(3795282..3796043) Desulfovibrio salexigens DSM 2638 8094408 YP_002992981.1 CDS Desal_3393 NC_012881.1 3796354 3796701 D KEGG: dal:Dalk_1609 hypothetical protein; hypothetical protein 3796354..3796701 Desulfovibrio salexigens DSM 2638 8094409 YP_002992982.1 CDS Desal_3394 NC_012881.1 3796735 3797076 D PFAM: Domain of unknown function DUF1791; KEGG: dvm:DvMF_3197 domain of unknown function DUF1791; hypothetical protein 3796735..3797076 Desulfovibrio salexigens DSM 2638 8094410 YP_002992983.1 CDS Desal_3395 NC_012881.1 3797161 3797538 D KEGG: sfu:Sfum_3196 hypothetical protein; hypothetical protein 3797161..3797538 Desulfovibrio salexigens DSM 2638 8094411 YP_002992984.1 CDS Desal_3396 NC_012881.1 3797562 3798308 R KEGG: dvm:DvMF_3168 hypothetical protein; hypothetical protein complement(3797562..3798308) Desulfovibrio salexigens DSM 2638 8094412 YP_002992985.1 CDS Desal_3397 NC_012881.1 3798479 3800959 R KEGG: dde:Dde_3088 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(3798479..3800959) Desulfovibrio salexigens DSM 2638 8094413 YP_002992986.1 CDS Desal_3398 NC_012881.1 3801434 3801829 D PFAM: ROSMUCR transcriptional regulator; KEGG: dvl:Dvul_0717 MucR family transcriptional regulator; MucR family transcriptional regulator 3801434..3801829 Desulfovibrio salexigens DSM 2638 8094414 YP_002992987.1 CDS Desal_3399 NC_012881.1 3801931 3802683 R PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_1716 chemotaxis protein PomB; OmpA/MotB domain-containing protein complement(3801931..3802683) Desulfovibrio salexigens DSM 2638 8094415 YP_002992988.1 CDS Desal_3400 NC_012881.1 3802763 3803131 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvm:DvMF_0063 response regulator receiver protein; response regulator receiver protein complement(3802763..3803131) Desulfovibrio salexigens DSM 2638 8094416 YP_002992989.1 CDS Desal_3401 NC_012881.1 3803134 3804966 R KEGG: dal:Dalk_5017 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3803134..3804966) Desulfovibrio salexigens DSM 2638 8094417 YP_002992990.1 CDS Desal_3402 NC_012881.1 3805105 3806211 R KEGG: nmu:Nmul_A1155 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; alanine dehydrogenase complement(3805105..3806211) Desulfovibrio salexigens DSM 2638 8094418 YP_002992991.1 CDS Desal_3403 NC_012881.1 3806408 3807493 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dat:HRM2_02500 two-component response regulator receiver protein (phosphoserine phosphatase); response regulator receiver protein 3806408..3807493 Desulfovibrio salexigens DSM 2638 8094419 YP_002992992.1 CDS Desal_3404 NC_012881.1 3807600 3808127 R PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: dal:Dalk_4013 rhodanese domain protein; rhodanese domain protein complement(3807600..3808127) Desulfovibrio salexigens DSM 2638 8094420 YP_002992993.1 CDS Desal_3405 NC_012881.1 3808158 3808628 R PFAM: DoxX family protein; KEGG: dal:Dalk_4014 DoxX family protein; DoxX family protein complement(3808158..3808628) Desulfovibrio salexigens DSM 2638 8094421 YP_002992994.1 CDS Desal_3406 NC_012881.1 3808834 3810387 D PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dvm:DvMF_2252 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3808834..3810387 Desulfovibrio salexigens DSM 2638 8094422 YP_002992995.1 CDS Desal_3407 NC_012881.1 3810400 3811590 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 3810400..3811590 Desulfovibrio salexigens DSM 2638 8094423 YP_002992996.1 CDS Desal_3408 NC_012881.1 3811654 3812331 D KEGG: dal:Dalk_2333 transcriptional regulator, TetR family; TetR family transcriptional regulator 3811654..3812331 Desulfovibrio salexigens DSM 2638 8094424 YP_002992997.1 CDS Desal_3409 NC_012881.1 3812344 3812784 D TIGRFAM: C_GCAxxG_C_C family protein; KEGG: sfu:Sfum_2781 C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 3812344..3812784 Desulfovibrio salexigens DSM 2638 8094425 YP_002992998.1 CDS Desal_3410 NC_012881.1 3812903 3813781 R KEGG: dvl:Dvul_2897 hypothetical protein; hypothetical protein complement(3812903..3813781) Desulfovibrio salexigens DSM 2638 8094426 YP_002992999.1 CDS Desal_3411 NC_012881.1 3813947 3815254 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dat:HRM2_03410 ColS; histidine kinase complement(3813947..3815254) Desulfovibrio salexigens DSM 2638 8094427 YP_002993000.1 CDS Desal_3412 NC_012881.1 3815244 3815933 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dat:HRM2_03400 ColR; transcriptional regulator complement(3815244..3815933) Desulfovibrio salexigens DSM 2638 8094428 YP_002993001.1 CDS Desal_3413 NC_012881.1 3816076 3817236 R PFAM: major facilitator superfamily MFS_1; KEGG: dat:HRM2_32890 permease of the major facilitator superfamily; major facilitator superfamily protein complement(3816076..3817236) Desulfovibrio salexigens DSM 2638 8094429 YP_002993002.1 CDS Desal_3414 NC_012881.1 3817346 3818062 D PFAM: protein of unknown function DUF45; KEGG: sfu:Sfum_1535 protein of unknown function DUF45; hypothetical protein 3817346..3818062 Desulfovibrio salexigens DSM 2638 8094430 YP_002993003.1 CDS Desal_3415 NC_012881.1 3818182 3818517 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sat:SYN_02356 anti-sigma F factor antagonist; anti-sigma-factor antagonist 3818182..3818517 Desulfovibrio salexigens DSM 2638 8094431 YP_002993004.1 CDS Desal_3416 NC_012881.1 3818528 3819304 D PFAM: DSBA oxidoreductase; KEGG: bba:Bd0789 disulfide interchange protein; DSBA oxidoreductase 3818528..3819304 Desulfovibrio salexigens DSM 2638 8094432 YP_002993005.1 CDS Desal_3417 NC_012881.1 3819446 3819958 D PFAM: CheD family protein; KEGG: gbm:Gbem_1596 CheD, stimulates methylation of MCP proteins; CheD, stimulates methylation of MCP protein 3819446..3819958 Desulfovibrio salexigens DSM 2638 8094433 YP_002993006.1 CDS Desal_3418 NC_012881.1 3819991 3820788 D KEGG: pca:Pcar_2457 alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 3819991..3820788 Desulfovibrio salexigens DSM 2638 8094434 YP_002993007.1 CDS Desal_3419 NC_012881.1 3820850 3821164 D PFAM: Hpt domain protein; KEGG: sat:SYN_00227 cytoplasmic protein; Hpt domain-containing protein 3820850..3821164 Desulfovibrio salexigens DSM 2638 8094435 YP_002993008.1 CDS Desal_3420 NC_012881.1 3821205 3823952 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; KEGG: dde:Dde_2486 excinuclease ABC subunit A; excinuclease ABC subunit A complement(3821205..3823952) Desulfovibrio salexigens DSM 2638 8094436 YP_002993009.1 CDS Desal_3421 NC_012881.1 3824239 3825072 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mxa:MXAN_2061 HAMP domain/HD domain-containing protein; metal dependent phosphohydrolase complement(3824239..3825072) Desulfovibrio salexigens DSM 2638 8094437 YP_002993010.1 CDS Desal_3422 NC_012881.1 3825251 3826372 R PFAM: ATPase; KEGG: gur:Gura_0746 hypothetical protein; ATPase complement(3825251..3826372) Desulfovibrio salexigens DSM 2638 8094438 YP_002993011.1 CDS Desal_3423 NC_012881.1 3826539 3827399 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(3826539..3827399) Desulfovibrio salexigens DSM 2638 8094439 YP_002993012.1 CDS Desal_3425 NC_012881.1 3828021 3828287 R hypothetical protein complement(3828021..3828287) Desulfovibrio salexigens DSM 2638 8094441 YP_002993013.1 CDS eno NC_012881.1 3828404 3829696 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(3828404..3829696) Desulfovibrio salexigens DSM 2638 8091205 YP_002993014.1 CDS Desal_3427 NC_012881.1 3829779 3830564 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(3829779..3830564) Desulfovibrio salexigens DSM 2638 8092393 YP_002993015.1 CDS Desal_3428 NC_012881.1 3830936 3831550 D KEGG: dde:Dde_0126 MerR family transcriptional regulator; MerR family transcriptional regulator 3830936..3831550 Desulfovibrio salexigens DSM 2638 8092394 YP_002993016.1 CDS Desal_3429 NC_012881.1 3831655 3833553 D molecular chaperone; heat shock protein 90 3831655..3833553 Desulfovibrio salexigens DSM 2638 8092395 YP_002993017.1 CDS Desal_3430 NC_012881.1 3833728 3834093 D PFAM: Hpt domain protein; KEGG: rdeA; Hpt domain-containing protein; Hpt protein 3833728..3834093 Desulfovibrio salexigens DSM 2638 8092396 YP_002993018.1 CDS Desal_3431 NC_012881.1 3834192 3834557 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dal:Dalk_0899 response regulator receiver protein; response regulator receiver protein 3834192..3834557 Desulfovibrio salexigens DSM 2638 8092397 YP_002993019.1 CDS Desal_3432 NC_012881.1 3834571 3835197 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dvm:DvMF_1489 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(3834571..3835197) Desulfovibrio salexigens DSM 2638 8092398 YP_002993020.1 CDS Desal_3433 NC_012881.1 3835270 3835761 R KEGG: dvl:Dvul_2454 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(3835270..3835761) Desulfovibrio salexigens DSM 2638 8092399 YP_002993021.1 CDS Desal_3434 NC_012881.1 3835758 3837029 R KEGG: dde:Dde_3458 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; phosphoribosylamine/glycine ligase complement(3835758..3837029) Desulfovibrio salexigens DSM 2638 8092400 YP_002993022.1 CDS Desal_3435 NC_012881.1 3837162 3838838 R PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: dvm:DvMF_0360 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3837162..3838838) Desulfovibrio salexigens DSM 2638 8092401 YP_002993023.1 CDS Desal_3436 NC_012881.1 3838897 3841434 R KEGG: dvu:DVU1233 protein-P-II uridylyltransferase, PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; UTP-GlnB uridylyltransferase, GlnD complement(3838897..3841434) Desulfovibrio salexigens DSM 2638 8092402 YP_002993024.1 CDS Desal_3437 NC_012881.1 3841435 3841773 R PFAM: nitrogen regulatory protein P-II; KEGG: dde:Dde_2310 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II complement(3841435..3841773) Desulfovibrio salexigens DSM 2638 8092403 YP_002993025.1 CDS Desal_3438 NC_012881.1 3841798 3843000 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: dvm:DvMF_0866 ammonium transporter; ammonium transporter complement(3841798..3843000) Desulfovibrio salexigens DSM 2638 8092404 YP_002993026.1 CDS Desal_3439 NC_012881.1 3843453 3844349 D PFAM: periplasmic solute binding protein; KEGG: dvl:Dvul_1725 periplasmic solute binding protein; periplasmic solute binding protein 3843453..3844349 Desulfovibrio salexigens DSM 2638 8092405 YP_002993027.1 CDS Desal_3440 NC_012881.1 3844431 3844664 R hypothetical protein complement(3844431..3844664) Desulfovibrio salexigens DSM 2638 8092406 YP_002993028.1 CDS Desal_3441 NC_012881.1 3844986 3846521 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: sfu:Sfum_2772 transcriptional regulator, NifA subfamily, fis family; Fis family transcriptional regulator 3844986..3846521 Desulfovibrio salexigens DSM 2638 8092407 YP_002993029.1 CDS Desal_3442 NC_012881.1 3846700 3848364 D PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; KEGG: dvl:Dvul_1002 hydantoinase/oxoprolinase; hydantoinase/oxoprolinase 3846700..3848364 Desulfovibrio salexigens DSM 2638 8092408 YP_002993030.1 CDS Desal_3443 NC_012881.1 3848377 3849696 D PFAM: histone deacetylase superfamily; KEGG: dde:Dde_2337 histone deacetylase family protein; histone deacetylase 3848377..3849696 Desulfovibrio salexigens DSM 2638 8092409 YP_002993031.1 CDS Desal_3444 NC_012881.1 3849795 3851378 R KEGG: dvm:DvMF_0563 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(3849795..3851378) Desulfovibrio salexigens DSM 2638 8092410 YP_002993032.1 CDS Desal_3445 NC_012881.1 3851749 3852633 R TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: dvu:DVU0973 4-hydroxybenzoate octaprenyltransferase; 4-hydroxybenzoate polyprenyltransferase complement(3851749..3852633) Desulfovibrio salexigens DSM 2638 8092411 YP_002993033.1 CDS Desal_3446 NC_012881.1 3852657 3853100 R PFAM: protein of unknown function DUF606; KEGG: dde:Dde_0252 hypothetical protein; hypothetical protein complement(3852657..3853100) Desulfovibrio salexigens DSM 2638 8092412 YP_002993034.1 CDS Desal_3447 NC_012881.1 3853227 3854495 R KEGG: ses:SARI_01533 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase complement(3853227..3854495) Desulfovibrio salexigens DSM 2638 8092413 YP_002993035.1 CDS Desal_3448 NC_012881.1 3854672 3855460 R PFAM: metallophosphoesterase; KEGG: geo:Geob_3589 metallophosphoesterase; metallophosphoesterase complement(3854672..3855460) Desulfovibrio salexigens DSM 2638 8092414 YP_002993036.1 CDS Desal_3449 NC_012881.1 3855652 3857208 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(3855652..3857208) Desulfovibrio salexigens DSM 2638 8092415 YP_002993037.1 CDS Desal_3450 NC_012881.1 3857625 3857873 R KEGG: dvm:DvMF_1183 hypothetical protein; hypothetical protein complement(3857625..3857873) Desulfovibrio salexigens DSM 2638 8092417 YP_002993038.1 CDS Desal_3451 NC_012881.1 3857953 3858129 R hypothetical protein complement(3857953..3858129) Desulfovibrio salexigens DSM 2638 8092418 YP_002993039.1 CDS glmU NC_012881.1 3858161 3859543 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(3858161..3859543) Desulfovibrio salexigens DSM 2638 8092419 YP_002993040.1 CDS atpC NC_012881.1 3859746 3860174 R produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon complement(3859746..3860174) Desulfovibrio salexigens DSM 2638 8092420 YP_002993041.1 CDS Desal_3454 NC_012881.1 3860189 3861592 R KEGG: dvl:Dvul_2195 F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: ATPase AAA; ATP synthase F1 subunit beta complement(3860189..3861592) Desulfovibrio salexigens DSM 2638 8092421 YP_002993042.1 CDS Desal_3455 NC_012881.1 3861610 3862488 R produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(3861610..3862488) Desulfovibrio salexigens DSM 2638 8092422 YP_002993043.1 CDS Desal_3456 NC_012881.1 3862504 3864012 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(3862504..3864012) Desulfovibrio salexigens DSM 2638 8092423 YP_002993044.1 CDS Desal_3457 NC_012881.1 3864017 3864568 R produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(3864017..3864568) Desulfovibrio salexigens DSM 2638 8092424 YP_002993045.1 CDS Desal_3458 NC_012881.1 3864568 3865122 R TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: dvm:DvMF_2827 H+transporting two-sector ATPase B/B' subunit; ATP synthase F0 subunit B complement(3864568..3865122) Desulfovibrio salexigens DSM 2638 8092425 YP_002993046.1 CDS Desal_3459 NC_012881.1 3865168 3865584 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: dvm:DvMF_2826 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(3865168..3865584) Desulfovibrio salexigens DSM 2638 8092426 YP_002993047.1 CDS Desal_3460 NC_012881.1 3865727 3866095 R PFAM: protein of unknown function DUF583; KEGG: dvm:DvMF_2825 protein of unknown function DUF583; hypothetical protein complement(3865727..3866095) Desulfovibrio salexigens DSM 2638 8092427 YP_002993048.1 CDS Desal_3461 NC_012881.1 3866146 3867261 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: dde:Dde_0992 rod shape-determining protein RodA; rod shape-determining protein RodA complement(3866146..3867261) Desulfovibrio salexigens DSM 2638 8092428 YP_002993049.1 CDS Desal_3462 NC_012881.1 3867261 3869057 R KEGG: dde:Dde_0993 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 complement(3867261..3869057) Desulfovibrio salexigens DSM 2638 8092429 YP_002993050.1 CDS Desal_3463 NC_012881.1 3869044 3869505 R KEGG: dvm:DvMF_2822 hypothetical protein; hypothetical protein complement(3869044..3869505) Desulfovibrio salexigens DSM 2638 8092430 YP_002993051.1 CDS Desal_3464 NC_012881.1 3869509 3870399 R TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: dvl:Dvul_2185 rod shape-determining protein MreC; rod shape-determining protein MreC complement(3869509..3870399) Desulfovibrio salexigens DSM 2638 8092431 YP_002993052.1 CDS Desal_3465 NC_012881.1 3870620 3871660 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(3870620..3871660) Desulfovibrio salexigens DSM 2638 8092432 YP_002993053.1 CDS Desal_3466 NC_012881.1 3871893 3872846 D KEGG: dde:Dde_0997 hypothetical protein; TIGRFAM: hypothetical protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 3871893..3872846 Desulfovibrio salexigens DSM 2638 8092433 YP_002993054.1 CDS Desal_3467 NC_012881.1 3872946 3873845 D KEGG: dde:Dde_0867 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 3872946..3873845 Desulfovibrio salexigens DSM 2638 8092434 YP_002993055.1 CDS Desal_3468 NC_012881.1 3873883 3875067 R PFAM: glycosyl transferase group 1; KEGG: mno:Mnod_5881 glycosyl transferase group 1; group 1 glycosyl transferase complement(3873883..3875067) Desulfovibrio salexigens DSM 2638 8092435 YP_002993056.1 CDS Desal_3469 NC_012881.1 3875099 3876412 R KEGG: pag:PLES_14931 GDP-mannose 6-dehydrogenase AlgD; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(3875099..3876412) Desulfovibrio salexigens DSM 2638 8092436 YP_002993057.1 CDS Desal_3470 NC_012881.1 3876421 3878418 R PFAM: heparinase II/III family protein; KEGG: pin:Ping_0433 heparinase II/III family protein; heparinase II/III family protein complement(3876421..3878418) Desulfovibrio salexigens DSM 2638 8092437 YP_002993058.1 CDS Desal_3471 NC_012881.1 3878591 3879547 R TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1060 phosphate ABC transporter permease; phosphate ABC transporter permease complement(3878591..3879547) Desulfovibrio salexigens DSM 2638 8092438 YP_002993059.1 CDS Desal_3472 NC_012881.1 3879572 3880924 R TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_2887 phosphate ABC transporter inner membrane subunit PstC; phosphate ABC transporter permease complement(3879572..3880924) Desulfovibrio salexigens DSM 2638 8092439 YP_002993060.1 CDS Desal_3473 NC_012881.1 3881054 3881872 R TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dvl:Dvul_0765 phosphate binding protein; phosphate binding protein complement(3881054..3881872) Desulfovibrio salexigens DSM 2638 8092440 YP_002993061.1 CDS Desal_3474 NC_012881.1 3882183 3883535 D KEGG: dvu:DVU0295 amine oxidase, flavin-containing; amine oxidase, flavin-containing 3882183..3883535 Desulfovibrio salexigens DSM 2638 8092441 YP_002993062.1 CDS Desal_3475 NC_012881.1 3883540 3884616 D PFAM: peptidase M24; creatinase; KEGG: dvm:DvMF_1929 peptidase M24; peptidase M24 3883540..3884616 Desulfovibrio salexigens DSM 2638 8092442 YP_002993063.1 CDS Desal_3476 NC_012881.1 3884831 3885112 D KEGG: dde:Dde_0181 hypothetical protein; hypothetical protein 3884831..3885112 Desulfovibrio salexigens DSM 2638 8092443 YP_002993064.1 CDS Desal_3477 NC_012881.1 3885269 3885874 D PFAM: regulatory protein TetR; KEGG: dol:Dole_0167 TetR family transcriptional regulator; TetR family transcriptional regulator 3885269..3885874 Desulfovibrio salexigens DSM 2638 8092444 YP_002993065.1 CDS Desal_3478 NC_012881.1 3885998 3886480 D KEGG: dvm:DvMF_2990 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 3885998..3886480 Desulfovibrio salexigens DSM 2638 8092445 YP_002993066.1 CDS Desal_3479 NC_012881.1 3886573 3887340 R PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: glo:Glov_0114 methyltransferase type 11; methyltransferase type 11 complement(3886573..3887340) Desulfovibrio salexigens DSM 2638 8092446 YP_002993067.1 CDS Desal_3480 NC_012881.1 3887474 3889000 R KEGG: dvl:Dvul_2256 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; Mg chelatase subunit ChlI complement(3887474..3889000) Desulfovibrio salexigens DSM 2638 8092447 YP_002993068.1 CDS Desal_3481 NC_012881.1 3889142 3889570 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: geo:Geob_2307 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein complement(3889142..3889570) Desulfovibrio salexigens DSM 2638 8092448 YP_002993069.1 CDS Desal_3482 NC_012881.1 3889645 3892305 R TIGRFAM: cobyric acid synthase CobQ; L-threonine-O-3-phosphate decarboxylase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; aminotransferase class I and II; cobyrinic acid ac-diamide synthase; KEGG: pca:Pcar_0484 cobyric acid synthase; cobyric acid synthase CobQ complement(3889645..3892305) Desulfovibrio salexigens DSM 2638 8092449 YP_002993070.1 CDS Desal_3483 NC_012881.1 3892465 3892833 D PFAM: cupin; KEGG: hch:HCH_04426 mannose-6-phosphate isomerase; cupin 3892465..3892833 Desulfovibrio salexigens DSM 2638 8092450 YP_002993071.1 CDS Desal_3484 NC_012881.1 3892848 3893852 R hypothetical protein complement(3892848..3893852) Desulfovibrio salexigens DSM 2638 8092451 YP_002993072.1 CDS Desal_3485 NC_012881.1 3893946 3894842 R PFAM: radical SAM domain protein; KEGG: dvu:DVU3003 radical SAM domain-containing protein; radical SAM domain protein complement(3893946..3894842) Desulfovibrio salexigens DSM 2638 8092452 YP_002993073.1 CDS Desal_3486 NC_012881.1 3894885 3895985 R SMART: hypothetical protein; KEGG: hypothetical protein; hypothetical protein complement(3894885..3895985) Desulfovibrio salexigens DSM 2638 8092453 YP_002993074.1 CDS Desal_3487 NC_012881.1 3896082 3898358 R KEGG: dde:Dde_1360 GAF sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; multi-sensor hybrid histidine kinase complement(3896082..3898358) Desulfovibrio salexigens DSM 2638 8092454 YP_002993075.1 CDS Desal_3488 NC_012881.1 3898600 3900480 D PFAM: KAP P-loop domain protein; KEGG: plu:plu1827 hypothetical protein; KAP P-loop domain-containing protein 3898600..3900480 Desulfovibrio salexigens DSM 2638 8092455 YP_002993076.1 CDS Desal_3489 NC_012881.1 3900569 3901171 R KEGG: dvm:DvMF_2718 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I complement(3900569..3901171) Desulfovibrio salexigens DSM 2638 8092456 YP_002993077.1 CDS Desal_3490 NC_012881.1 3901248 3903053 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(3901248..3903053) Desulfovibrio salexigens DSM 2638 8092457 YP_002993078.1 CDS Desal_3491 NC_012881.1 3903467 3903886 R hypothetical protein complement(3903467..3903886) Desulfovibrio salexigens DSM 2638 8092458 YP_002993079.1 CDS Desal_3492 NC_012881.1 3904299 3905144 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dvm:DvMF_0937 ferredoxin-NADP(+) reductase subunit alpha; ferredoxin-NADP(+) reductase subunit alpha 3904299..3905144 Desulfovibrio salexigens DSM 2638 8092459 YP_002993080.1 CDS Desal_3493 NC_012881.1 3905134 3906549 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 3905134..3906549 Desulfovibrio salexigens DSM 2638 8092460 YP_002993081.1 CDS Desal_3495 NC_012881.1 3909427 3910722 R PFAM: protein of unknown function DUF1063; KEGG: dde:Dde_0807 hypothetical protein; hypothetical protein complement(3909427..3910722) Desulfovibrio salexigens DSM 2638 8092462 YP_002993082.1 CDS Desal_3497 NC_012881.1 3912127 3912501 R TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: dde:Dde_0809 endoribonuclease L-PSP; endoribonuclease L-PSP complement(3912127..3912501) Desulfovibrio salexigens DSM 2638 8092464 YP_002993083.1 CDS Desal_3498 NC_012881.1 3912811 3913524 R PFAM: YheO domain protein; KEGG: dde:Dde_0810 hypothetical protein; YheO domain-containing protein complement(3912811..3913524) Desulfovibrio salexigens DSM 2638 8092465 YP_002993084.1 CDS Desal_3499 NC_012881.1 3913521 3913679 R hypothetical protein complement(3913521..3913679) Desulfovibrio salexigens DSM 2638 8092466 YP_002993085.1 CDS Desal_3500 NC_012881.1 3913696 3914697 D KEGG: sfu:Sfum_2650 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase 3913696..3914697 Desulfovibrio salexigens DSM 2638 8092467 YP_002993086.1 CDS Desal_3501 NC_012881.1 3914710 3915135 R PFAM: GCN5-related N-acetyltransferase; KEGG: psa:PST_2705 probable acetyltransferase; N-acetyltransferase GCN5 complement(3914710..3915135) Desulfovibrio salexigens DSM 2638 8092468 YP_002993087.1 CDS Desal_3502 NC_012881.1 3915137 3915967 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: dvl:Dvul_0185 TatD family hydrolase; TatD family hydrolase complement(3915137..3915967) Desulfovibrio salexigens DSM 2638 8092469 YP_002993088.1 CDS Desal_3503 NC_012881.1 3916141 3917124 R KEGG: dde:Dde_0075 hypothetical protein; hypothetical protein complement(3916141..3917124) Desulfovibrio salexigens DSM 2638 8092470 YP_002993089.1 CDS Desal_3504 NC_012881.1 3917328 3918692 D KEGG: dde:Dde_0318 Fis family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; SMART: ATPase AAA; PAS modulated Fis family sigma-54-specific transcriptional regulator 3917328..3918692 Desulfovibrio salexigens DSM 2638 8092471 YP_002993090.1 CDS Desal_3505 NC_012881.1 3918696 3919031 D KEGG: dvl:Dvul_0409 hypothetical protein; hypothetical protein 3918696..3919031 Desulfovibrio salexigens DSM 2638 8092472 YP_002993091.1 CDS Desal_3506 NC_012881.1 3919289 3919651 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dol:Dole_2331 response regulator receiver protein; response regulator receiver protein 3919289..3919651 Desulfovibrio salexigens DSM 2638 8092473 YP_002993092.1 CDS Desal_3507 NC_012881.1 3919693 3920247 D PFAM: CBS domain containing protein; KEGG: dde:Dde_0325 hypothetical protein; hypothetical protein 3919693..3920247 Desulfovibrio salexigens DSM 2638 8092092 YP_002993093.1 CDS Desal_3508 NC_012881.1 3920266 3921735 D PFAM: sodium/sulfate symporter; citrate transporter; KEGG: dde:Dde_0326 transmembrane transport proteins-like; sodium/sulfate symporter 3920266..3921735 Desulfovibrio salexigens DSM 2638 8090896 YP_002993094.1 CDS Desal_3509 NC_012881.1 3921876 3923315 D KEGG: dal:Dalk_5167 hexapaptide repeat-containing transferase; hexapaptide repeat-containing transferase 3921876..3923315 Desulfovibrio salexigens DSM 2638 8090897 YP_002993095.1 CDS nhaB NC_012881.1 3923365 3924855 D involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 3923365..3924855 Desulfovibrio salexigens DSM 2638 8090898 YP_002993096.1 CDS Desal_3511 NC_012881.1 3924938 3927253 R PFAM: chemotaxis sensory transducer; Cache domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: dvm:DvMF_0127 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(3924938..3927253) Desulfovibrio salexigens DSM 2638 8090899 YP_002993097.1 CDS Desal_3512 NC_012881.1 3927475 3929787 R PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: dvm:DvMF_0563 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(3927475..3929787) Desulfovibrio salexigens DSM 2638 8090900 YP_002993098.1 CDS Desal_3513 NC_012881.1 3929959 3930189 R KEGG: dvm:DvMF_1472 hypothetical protein; hypothetical protein complement(3929959..3930189) Desulfovibrio salexigens DSM 2638 8090901 YP_002993099.1 CDS Desal_3514 NC_012881.1 3930348 3932408 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(3930348..3932408) Desulfovibrio salexigens DSM 2638 8090902 YP_002993100.1 CDS Desal_3515 NC_012881.1 3933106 3935340 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: dvu:DVU0645 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3933106..3935340) Desulfovibrio salexigens DSM 2638 8090903 YP_002993101.1 CDS Desal_3516 NC_012881.1 3935589 3935999 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dde:Dde_2977 MarR family transcriptional regulator; MarR family transcriptional regulator complement(3935589..3935999) Desulfovibrio salexigens DSM 2638 8090904 YP_002993102.1 CDS Desal_3517 NC_012881.1 3936014 3936772 R KEGG: dde:Dde_2976 hypothetical protein; hypothetical protein complement(3936014..3936772) Desulfovibrio salexigens DSM 2638 8090905 YP_002993103.1 CDS Desal_3518 NC_012881.1 3936943 3937407 R TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: dde:Dde_0414 hypothetical protein; ybaK/ebsC protein complement(3936943..3937407) Desulfovibrio salexigens DSM 2638 8090906 YP_002993104.1 CDS Desal_3519 NC_012881.1 3937451 3938248 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dat:HRM2_47280 CbiO4; ABC transporter complement(3937451..3938248) Desulfovibrio salexigens DSM 2638 8090907 YP_002993105.1 CDS Desal_3520 NC_012881.1 3938238 3939092 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dat:HRM2_47270 CbiO3; ABC transporter complement(3938238..3939092) Desulfovibrio salexigens DSM 2638 8090908 YP_002993106.1 CDS Desal_3521 NC_012881.1 3939079 3939876 R PFAM: cobalt transport protein; KEGG: dat:HRM2_47260 CbiQ3; cobalt transport protein complement(3939079..3939876) Desulfovibrio salexigens DSM 2638 8090909 YP_002993107.1 CDS Desal_3522 NC_012881.1 3939888 3940478 R KEGG: dat:HRM2_47250 hypothetical protein; hypothetical protein complement(3939888..3940478) Desulfovibrio salexigens DSM 2638 8090910 YP_002993108.1 CDS Desal_3523 NC_012881.1 3940491 3940895 R PFAM: protein of unknown function DUF296; KEGG: dat:HRM2_47240 DNA-binding protein; hypothetical protein complement(3940491..3940895) Desulfovibrio salexigens DSM 2638 8090911 YP_002993109.1 CDS Desal_3524 NC_012881.1 3941106 3942608 R PFAM: amino acid permease-associated region; KEGG: dvl:Dvul_0974 amino acid permease-associated region; amino acid permease complement(3941106..3942608) Desulfovibrio salexigens DSM 2638 8090912 YP_002993110.1 CDS Desal_3525 NC_012881.1 3943226 3943786 D KEGG: dvl:Dvul_0976 hypothetical protein; hypothetical protein 3943226..3943786 Desulfovibrio salexigens DSM 2638 8090913 YP_002993111.1 CDS Desal_3526 NC_012881.1 3943793 3944527 D PFAM: protein of unknown function DUF81; KEGG: dvu:DVU2276 hypothetical protein; hypothetical protein 3943793..3944527 Desulfovibrio salexigens DSM 2638 8090914 YP_002993112.1 CDS Desal_3527 NC_012881.1 3944624 3946123 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA; KEGG: dvl:Dvul_0978 sigma-54 dependent trancsriptional regulator; Fis family sigma-54 specific transcriptional regulator complement(3944624..3946123) Desulfovibrio salexigens DSM 2638 8090915 YP_002993113.1 CDS Desal_3528 NC_012881.1 3946457 3948910 D PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; KEGG: dvu:DVU2272 formate acetyltransferase; formate C-acetyltransferase 3946457..3948910 Desulfovibrio salexigens DSM 2638 8090916 YP_002993114.1 CDS Desal_3529 NC_012881.1 3949186 3950079 D KEGG: dvu:DVU2271 pyruvate formate-lyase activating enzyme, TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; glycyl-radical enzyme activating protein 3949186..3950079 Desulfovibrio salexigens DSM 2638 8090917 YP_002993115.1 CDS Desal_3530 NC_012881.1 3950101 3950628 D TIGRFAM: C_GCAxxG_C_C family protein; KEGG: dvu:DVU2753 C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 3950101..3950628 Desulfovibrio salexigens DSM 2638 8090918 YP_002993116.1 CDS Desal_3531 NC_012881.1 3950653 3950766 D KEGG: dvl:Dvul_0981 hypothetical protein; hypothetical protein 3950653..3950766 Desulfovibrio salexigens DSM 2638 8090919 YP_002993117.1 CDS Desal_3532 NC_012881.1 3950779 3950946 D KEGG: dde:Dde_0689 hypothetical protein; hypothetical protein 3950779..3950946 Desulfovibrio salexigens DSM 2638 8090920 YP_002993118.1 CDS Desal_3533 NC_012881.1 3951222 3952847 D KEGG: glo:Glov_0749 outer membrane efflux protein; outer membrane efflux protein 3951222..3952847 Desulfovibrio salexigens DSM 2638 8090921 YP_002993119.1 CDS Desal_3534 NC_012881.1 3952856 3954607 D KEGG: glo:Glov_0748 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 3952856..3954607 Desulfovibrio salexigens DSM 2638 8090922 YP_002993120.1 CDS Desal_3535 NC_012881.1 3954607 3955275 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: glo:Glov_0747 ABC transporter; ABC transporter 3954607..3955275 Desulfovibrio salexigens DSM 2638 8090923 YP_002993121.1 CDS Desal_3536 NC_012881.1 3955272 3956447 D PFAM: protein of unknown function DUF214; KEGG: glo:Glov_0746 protein of unknown function DUF214; hypothetical protein 3955272..3956447 Desulfovibrio salexigens DSM 2638 8090924 YP_002993122.1 CDS Desal_3537 NC_012881.1 3956510 3958783 R PFAM: MscS Mechanosensitive ion channel; KEGG: sfu:Sfum_1627 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS complement(3956510..3958783) Desulfovibrio salexigens DSM 2638 8090925 YP_002993123.1 CDS Desal_3538 NC_012881.1 3959019 3959882 R PFAM: protein of unknown function DUF161; KEGG: dvl:Dvul_0531 hypothetical protein; hypothetical protein complement(3959019..3959882) Desulfovibrio salexigens DSM 2638 8090926 YP_002993124.1 CDS Desal_3539 NC_012881.1 3959875 3960819 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: dat:HRM2_23520 hypothetical protein; hypothetical protein complement(3959875..3960819) Desulfovibrio salexigens DSM 2638 8090927 YP_002993125.1 CDS Desal_3540 NC_012881.1 3961391 3962860 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-3 domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: dds:Ddes_2345 sigma54 specific transcriptional regulator, fis family; Fis family sigma-54 specific transcriptional regulator complement(3961391..3962860) Desulfovibrio salexigens DSM 2638 8090928 YP_002993126.1 CDS Desal_3541 NC_012881.1 3963011 3963286 R hypothetical protein complement(3963011..3963286) Desulfovibrio salexigens DSM 2638 8090929 YP_002993127.1 CDS Desal_3542 NC_012881.1 3963298 3964302 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: pca:Pcar_0941 hypothetical protein; hypothetical protein complement(3963298..3964302) Desulfovibrio salexigens DSM 2638 8090930 YP_002993128.1 CDS Desal_3543 NC_012881.1 3964490 3965071 R KEGG: dds:Ddes_2344 hypothetical protein; hypothetical protein complement(3964490..3965071) Desulfovibrio salexigens DSM 2638 8090931 YP_002993129.1 CDS Desal_3544 NC_012881.1 3965182 3965613 R KEGG: dds:Ddes_2346 hypothetical protein; hypothetical protein complement(3965182..3965613) Desulfovibrio salexigens DSM 2638 8090932 YP_002993130.1 CDS Desal_3545 NC_012881.1 3965634 3965966 R hypothetical protein complement(3965634..3965966) Desulfovibrio salexigens DSM 2638 8090933 YP_002993131.1 CDS Desal_3546 NC_012881.1 3965978 3966376 R hypothetical protein complement(3965978..3966376) Desulfovibrio salexigens DSM 2638 8090934 YP_002993132.1 CDS Desal_3547 NC_012881.1 3966389 3966670 R hypothetical protein complement(3966389..3966670) Desulfovibrio salexigens DSM 2638 8090935 YP_002993133.1 CDS Desal_3548 NC_012881.1 3966878 3968758 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dds:Ddes_2343 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(3966878..3968758) Desulfovibrio salexigens DSM 2638 8090936 YP_002993134.1 CDS Desal_3549 NC_012881.1 3968873 3970426 R PFAM: BCCT transporter; KEGG: dds:Ddes_2342 BCCT transporter; BCCT transporter complement(3968873..3970426) Desulfovibrio salexigens DSM 2638 8090937 YP_002993135.1 CDS Desal_3550 NC_012881.1 3971064 3972515 D PFAM: amino acid permease-associated region; KEGG: lip:LI0262 amino acid transporters; amino acid permease 3971064..3972515 Desulfovibrio salexigens DSM 2638 8090938 YP_002993136.1 CDS Desal_3551 NC_012881.1 3972565 3973962 D KEGG: vsa:VSAL_I1197 glutamate decarboxylase beta; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; glutamate decarboxylase 3972565..3973962 Desulfovibrio salexigens DSM 2638 8090939 YP_002993137.1 CDS Desal_3552 NC_012881.1 3974280 3975281 D PFAM: extracellular solute-binding protein family 1; KEGG: dps:DP1396 iron(III) ABC transporter periplasmic binding protein [precursor]; extracellular solute-binding protein 3974280..3975281 Desulfovibrio salexigens DSM 2638 8090940 YP_002993138.1 CDS Desal_3553 NC_012881.1 3975284 3976945 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nmu:Nmul_A0731 binding-protein dependent transport system inner membrane protein; binding-protein-dependent transport system inner membrane protein 3975284..3976945 Desulfovibrio salexigens DSM 2638 8090941 YP_002993139.1 CDS Desal_3554 NC_012881.1 3976954 3978030 D PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: cti:RALTA_A0750 iron(III)-transport system ATP-binding protein; ABC transporter 3976954..3978030 Desulfovibrio salexigens DSM 2638 8090942 YP_002993140.1 CDS Desal_3555 NC_012881.1 3978093 3978938 R PFAM: protein of unknown function DUF169; KEGG: dde:Dde_2491 hypothetical protein; hypothetical protein complement(3978093..3978938) Desulfovibrio salexigens DSM 2638 8090943 YP_002993141.1 CDS Desal_3556 NC_012881.1 3979065 3979961 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dde:Dde_2490 LysR family transcriptional regulator; LysR family transcriptional regulator 3979065..3979961 Desulfovibrio salexigens DSM 2638 8090944 YP_002993142.1 CDS Desal_3557 NC_012881.1 3980000 3980962 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dat:HRM2_28260 hypothetical protein; GntR family transcriptional regulator complement(3980000..3980962) Desulfovibrio salexigens DSM 2638 8090945 YP_002993143.1 CDS Desal_3558 NC_012881.1 3981111 3981989 R PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dde:Dde_3137 AraC family transcriptional regulator; AraC family transcriptional regulator complement(3981111..3981989) Desulfovibrio salexigens DSM 2638 8090946 YP_002993144.1 CDS Desal_3559 NC_012881.1 3982164 3983351 D PFAM: iron-containing alcohol dehydrogenase; KEGG: gbm:Gbem_0781 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 3982164..3983351 Desulfovibrio salexigens DSM 2638 8090947 YP_002993145.1 CDS Desal_3560 NC_012881.1 3983364 3984416 D KEGG: dde:Dde_3138 membrane protein; membrane protein 3983364..3984416 Desulfovibrio salexigens DSM 2638 8090948 YP_002993146.1 CDS Desal_3561 NC_012881.1 3984527 3985723 D PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2353 major facilitator transporter; major facilitator superfamily protein 3984527..3985723 Desulfovibrio salexigens DSM 2638 8090949 YP_002993147.1 CDS Desal_3562 NC_012881.1 3985768 3986241 D hypothetical protein 3985768..3986241 Desulfovibrio salexigens DSM 2638 8090950 YP_002993148.1 CDS Desal_3563 NC_012881.1 3986259 3986996 D PFAM: carboxymuconolactone decarboxylase; KEGG: pca:Pcar_1079 carboxymuconolactone decarboxylase family protein; carboxymuconolactone decarboxylase 3986259..3986996 Desulfovibrio salexigens DSM 2638 8090951 YP_002993149.1 CDS Desal_3564 NC_012881.1 3987032 3987445 D PFAM: cupin; KEGG: asu:Asuc_1308 carboxymuconolactone decarboxylase; cupin 3987032..3987445 Desulfovibrio salexigens DSM 2638 8090952 YP_002993150.1 CDS Desal_3565 NC_012881.1 3987584 3988435 D KEGG: dde:Dde_3142 hypothetical protein; hypothetical protein 3987584..3988435 Desulfovibrio salexigens DSM 2638 8090953 YP_002993151.1 CDS Desal_3566 NC_012881.1 3988510 3990333 R TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: dvm:DvMF_1706 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; glucosamine/fructose-6-phosphate aminotransferase complement(3988510..3990333) Desulfovibrio salexigens DSM 2638 8090954 YP_002993152.1 CDS Desal_3567 NC_012881.1 3990468 3991076 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(3990468..3991076) Desulfovibrio salexigens DSM 2638 8090955 YP_002993153.1 CDS Desal_3568 NC_012881.1 3991244 3992689 R KEGG: dvm:DvMF_1700 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase complement(3991244..3992689) Desulfovibrio salexigens DSM 2638 8090956 YP_002993154.1 CDS Desal_3569 NC_012881.1 3992881 3994194 D KEGG: dvl:Dvul_0234 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme YliG 3992881..3994194 Desulfovibrio salexigens DSM 2638 8090957 YP_002993155.1 CDS Desal_3570 NC_012881.1 3994255 3994734 R hypothetical protein complement(3994255..3994734) Desulfovibrio salexigens DSM 2638 8090958 YP_002993156.1 CDS Desal_3571 NC_012881.1 3994837 3996672 R PFAM: sporulation domain protein; KEGG: gsu:GSU1811 hypothetical protein; sporulation domain protein complement(3994837..3996672) Desulfovibrio salexigens DSM 2638 8090959 YP_002993157.1 CDS Desal_3572 NC_012881.1 3996665 3997726 R PFAM: glycosyl transferase family 9; KEGG: dvl:Dvul_1939 glycosyl transferase family protein; glycosyl transferase family protein complement(3996665..3997726) Desulfovibrio salexigens DSM 2638 8090960 YP_002993158.1 CDS Desal_3573 NC_012881.1 3997865 3998254 R PFAM: protein of unknown function DUF202; KEGG: sfu:Sfum_2754 protein of unknown function DUF202; hypothetical protein complement(3997865..3998254) Desulfovibrio salexigens DSM 2638 8090961 YP_002993159.1 CDS Desal_3574 NC_012881.1 3998406 3998645 D KEGG: dvm:DvMF_2255 hypothetical protein; hypothetical protein 3998406..3998645 Desulfovibrio salexigens DSM 2638 8090962 YP_002993160.1 CDS glpX NC_012881.1 3998733 3999716 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(3998733..3999716) Desulfovibrio salexigens DSM 2638 8090963 YP_002993161.1 CDS Desal_3576 NC_012881.1 4000091 4001854 D KEGG: dde:Dde_1370 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 4000091..4001854 Desulfovibrio salexigens DSM 2638 8090964 YP_002993162.1 CDS Desal_3577 NC_012881.1 4001891 4002361 D KEGG: dat:HRM2_42590 AhpF; AhpF protein 4001891..4002361 Desulfovibrio salexigens DSM 2638 8090965 YP_002993163.1 CDS Desal_3578 NC_012881.1 4002523 4003638 D hypothetical protein 4002523..4003638 Desulfovibrio salexigens DSM 2638 8090966 YP_002993164.1 CDS Desal_3579 NC_012881.1 4003729 4003962 R KEGG: dvm:DvMF_1577 hypothetical protein; hypothetical protein complement(4003729..4003962) Desulfovibrio salexigens DSM 2638 8090967 YP_002993165.1 CDS Desal_3580 NC_012881.1 4004065 4005321 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvm:DvMF_1937 response regulator receiver protein; response regulator receiver protein complement(4004065..4005321) Desulfovibrio salexigens DSM 2638 8090968 YP_002993166.1 CDS Desal_3581 NC_012881.1 4006166 4006552 D KEGG: dvm:DvMF_2256 transcriptional regulator, MucR family; MucR family transcriptional regulator 4006166..4006552 Desulfovibrio salexigens DSM 2638 8090969 YP_002993167.1 CDS Desal_3582 NC_012881.1 4006725 4007555 D PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: dde:Dde_0064 hypothetical protein; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 4006725..4007555 Desulfovibrio salexigens DSM 2638 8090970 YP_002993168.1 CDS Desal_3583 NC_012881.1 4007815 4008795 D TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: dvm:DvMF_1396 flagellar motor switch protein FliM; flagellar motor switch protein FliM 4007815..4008795 Desulfovibrio salexigens DSM 2638 8090971 YP_002993169.1 CDS Desal_3584 NC_012881.1 4009053 4009808 D PFAM: glycosyl transferase family 2; KEGG: lip:LI0381 cell wall biosynthesis glycosyltransferase; family 2 glycosyl transferase 4009053..4009808 Desulfovibrio salexigens DSM 2638 8090972 YP_002993170.1 CDS Desal_3585 NC_012881.1 4009805 4010236 D PFAM: WxcM domain protein; KEGG: gur:Gura_3191 WxcM domain-containing protein; WxcM domain-containing protein 4009805..4010236 Desulfovibrio salexigens DSM 2638 8090973 YP_002993171.1 CDS Desal_3586 NC_012881.1 4010214 4011311 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; KEGG: gme:Gmet_1325 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 4010214..4011311 Desulfovibrio salexigens DSM 2638 8090974 YP_002993172.1 CDS Desal_3587 NC_012881.1 4011386 4013014 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: dde:Dde_1218 hypothetical protein; ferredoxin-dependent glutamate synthase complement(4011386..4013014) Desulfovibrio salexigens DSM 2638 8090975 YP_002993173.1 CDS Desal_3588 NC_012881.1 4013411 4013983 R PFAM: rRNA methylase; KEGG: dvm:DvMF_2114 rRNA methylase; rRNA methylase complement(4013411..4013983) Desulfovibrio salexigens DSM 2638 8090976 YP_002993174.1 CDS Desal_3589 NC_012881.1 4014067 4014813 R hypothetical protein complement(4014067..4014813) Desulfovibrio salexigens DSM 2638 8090979 YP_002993175.1 CDS Desal_3590 NC_012881.1 4014823 4015320 R hypothetical protein complement(4014823..4015320) Desulfovibrio salexigens DSM 2638 8094523 YP_002993176.1 CDS Desal_3591 NC_012881.1 4015335 4016447 R hypothetical protein complement(4015335..4016447) Desulfovibrio salexigens DSM 2638 8094524 YP_002993177.1 CDS Desal_3592 NC_012881.1 4016490 4017437 R KEGG: geo:Geob_0889 general secretion pathway protein K; hypothetical protein complement(4016490..4017437) Desulfovibrio salexigens DSM 2638 8094525 YP_002993178.1 CDS Desal_3593 NC_012881.1 4017424 4018005 R hypothetical protein complement(4017424..4018005) Desulfovibrio salexigens DSM 2638 8094526 YP_002993179.1 CDS Desal_3594 NC_012881.1 4018005 4018367 R hypothetical protein complement(4018005..4018367) Desulfovibrio salexigens DSM 2638 8094527 YP_002993180.1 CDS Desal_3595 NC_012881.1 4018370 4018798 R KEGG: dat:HRM2_11390 general secretion pathway protein; hypothetical protein complement(4018370..4018798) Desulfovibrio salexigens DSM 2638 8094528 YP_002993181.1 CDS Desal_3596 NC_012881.1 4018819 4019280 R TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: gbm:Gbem_0592 general secretion pathway protein G; general secretion pathway protein G complement(4018819..4019280) Desulfovibrio salexigens DSM 2638 8094529 YP_002993182.1 CDS Desal_3597 NC_012881.1 4019312 4020676 R hypothetical protein complement(4019312..4020676) Desulfovibrio salexigens DSM 2638 8094530 YP_002993183.1 CDS Desal_3598 NC_012881.1 4020875 4022131 D PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ret:RHE_PE00175 two-component sensor histidine kinase protein; histidine kinase 4020875..4022131 Desulfovibrio salexigens DSM 2638 8094531 YP_002993184.1 CDS Desal_3599 NC_012881.1 4022131 4023042 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: aph:APH_0196 nitrogen assimilation regulatory protein; response regulator receiver protein 4022131..4023042 Desulfovibrio salexigens DSM 2638 8094532 YP_002993185.1 CDS Desal_3600 NC_012881.1 4023104 4023880 D KEGG: mxa:MXAN_2515 general secretion pathway protein C; type II secretory pathway component PulC-like protein 4023104..4023880 Desulfovibrio salexigens DSM 2638 8094533 YP_002993186.1 CDS Desal_3601 NC_012881.1 4023895 4025106 D PFAM: type II secretion system protein; KEGG: gur:Gura_0681 general secretion pathway protein F; type II secretion system protein 4023895..4025106 Desulfovibrio salexigens DSM 2638 8094534 YP_002993187.1 CDS Desal_3602 NC_012881.1 4025114 4026112 D KEGG: dvu:DVU0160 carbohydrate isomerase KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein; KpsF/GutQ family protein 4025114..4026112 Desulfovibrio salexigens DSM 2638 8094535 YP_002993188.1 CDS Desal_3603 NC_012881.1 4026324 4028288 D KEGG: noc:Noc_2478 asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; asparagine synthase 4026324..4028288 Desulfovibrio salexigens DSM 2638 8094536 YP_002993189.1 CDS Desal_3604 NC_012881.1 4028376 4029065 R PFAM: metallophosphoesterase; KEGG: pen:PSEEN0255 phosphatase; metallophosphoesterase complement(4028376..4029065) Desulfovibrio salexigens DSM 2638 8094537 YP_002993190.1 CDS Desal_3605 NC_012881.1 4029046 4030020 R KEGG: pen:PSEEN0256 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase subunit L complement(4029046..4030020) Desulfovibrio salexigens DSM 2638 8094538 YP_002993191.1 CDS Desal_3606 NC_012881.1 4030022 4030870 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: pen:PSEEN0257 epimerase; NAD-dependent epimerase/dehydratase complement(4030022..4030870) Desulfovibrio salexigens DSM 2638 8094539 YP_002993192.1 CDS Desal_3607 NC_012881.1 4030863 4031588 R PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: pen:PSEEN0258 SAM-dependent methyltransferase; methyltransferase type 12 complement(4030863..4031588) Desulfovibrio salexigens DSM 2638 8094540 YP_002993193.1 CDS Desal_3608 NC_012881.1 4031662 4032366 R PFAM: WbqC-like family protein; KEGG: rme:Rmet_5237 WbnG; WbqC-like family protein complement(4031662..4032366) Desulfovibrio salexigens DSM 2638 8094541 YP_002993194.1 CDS Desal_3609 NC_012881.1 4032406 4033341 R PFAM: glycosyl transferase family 2; KEGG: geo:Geob_0317 glycosyl transferase family 2; family 2 glycosyl transferase complement(4032406..4033341) Desulfovibrio salexigens DSM 2638 8094542 YP_002993195.1 CDS Desal_3610 NC_012881.1 4033379 4034470 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: pfo:Pfl01_4046 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(4033379..4034470) Desulfovibrio salexigens DSM 2638 8094543 YP_002993196.1 CDS Desal_3611 NC_012881.1 4034463 4035449 R PFAM: oxidoreductase domain protein; KEGG: gur:Gura_4277 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein complement(4034463..4035449) Desulfovibrio salexigens DSM 2638 8094544 YP_002993197.1 CDS Desal_3612 NC_012881.1 4035452 4036879 R PFAM: NDP-hexose 23-dehydratase; KEGG: gur:Gura_4278 NDP-hexose 2,3-dehydratase; NDP-hexose 23-dehydratase complement(4035452..4036879) Desulfovibrio salexigens DSM 2638 8094545 YP_002993198.1 CDS Desal_3613 NC_012881.1 4037015 4038835 R KEGG: Os02g0138900; hypothetical protein; hypothetical protein complement(4037015..4038835) Desulfovibrio salexigens DSM 2638 8094546 YP_002993199.1 CDS Desal_3614 NC_012881.1 4039011 4040120 D PFAM: glycosyl transferase group 1; KEGG: dde:Dde_0362 sugar transferase involved in lipopolysaccharide synthesis-like; group 1 glycosyl transferase 4039011..4040120 Desulfovibrio salexigens DSM 2638 8094547 YP_002993200.1 CDS Desal_3615 NC_012881.1 4040123 4040728 D PFAM: sugar transferase; KEGG: dde:Dde_0362 sugar transferase involved in lipopolysaccharide synthesis-like; sugar transferase 4040123..4040728 Desulfovibrio salexigens DSM 2638 8094548 YP_002993201.1 CDS Desal_3616 NC_012881.1 4040730 4041350 D PFAM: transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein; transferase 4040730..4041350 Desulfovibrio salexigens DSM 2638 8094549 YP_002993202.1 CDS Desal_3617 NC_012881.1 4041583 4042962 D PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: abu:Abu_1807 acetyltransferase; O-acyl transferase 4041583..4042962 Desulfovibrio salexigens DSM 2638 8094550 YP_002993203.1 CDS Desal_3618 NC_012881.1 4042937 4043965 D hypothetical protein 4042937..4043965 Desulfovibrio salexigens DSM 2638 8094551 YP_002993204.1 CDS Desal_3619 NC_012881.1 4044029 4045165 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dde:Dde_0361 aminotransferase-like; DegT/DnrJ/EryC1/StrS aminotransferase 4044029..4045165 Desulfovibrio salexigens DSM 2638 8094552 YP_002993205.1 CDS Desal_3620 NC_012881.1 4045169 4047040 D PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: dde:Dde_0360 lipopolysaccharide biosynthesis protein (WbpM)-like; polysaccharide biosynthesis protein CapD 4045169..4047040 Desulfovibrio salexigens DSM 2638 8094553 YP_002993206.1 CDS Desal_3621 NC_012881.1 4047055 4048440 D PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: sun:SUN_1534 alginate O-acetyltransferase; membrane bound O-acyl transferase MBOAT family protein 4047055..4048440 Desulfovibrio salexigens DSM 2638 8094554 YP_002993207.1 CDS Desal_3622 NC_012881.1 4048443 4050005 D SMART: ankyrin; KEGG: sun:SUN_1533 hypothetical protein; ankyrin 4048443..4050005 Desulfovibrio salexigens DSM 2638 8094555 YP_002993208.1 CDS Desal_3623 NC_012881.1 4050017 4050883 D PFAM: polysaccharide deacetylase; KEGG: pat:Patl_1172 polysaccharide deacetylase; polysaccharide deacetylase 4050017..4050883 Desulfovibrio salexigens DSM 2638 8094556 YP_002993209.1 CDS Desal_3624 NC_012881.1 4050945 4051472 D KEGG: dde:Dde_3684 hypothetical protein; hypothetical protein 4050945..4051472 Desulfovibrio salexigens DSM 2638 8094557 YP_002993210.1 CDS Desal_3625 NC_012881.1 4051510 4052667 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sat:SYN_02671 pleiotrophic regulatory protein; DegT/DnrJ/EryC1/StrS aminotransferase 4051510..4052667 Desulfovibrio salexigens DSM 2638 8094558 YP_002993211.1 CDS Desal_3626 NC_012881.1 4052671 4053816 D PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A1795 phosphoheptose isomerase; group 1 glycosyl transferase 4052671..4053816 Desulfovibrio salexigens DSM 2638 8094559 YP_002993212.1 CDS Desal_3627 NC_012881.1 4053813 4054991 D KEGG: mms:mma_2263 hypothetical protein; glycosyltransferase-like protein 4053813..4054991 Desulfovibrio salexigens DSM 2638 8094560 YP_002993213.1 CDS Desal_3628 NC_012881.1 4054984 4055943 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: scl:sce1037 NDP-sugar oxidoreductase; NAD-dependent epimerase/dehydratase 4054984..4055943 Desulfovibrio salexigens DSM 2638 8094561 YP_002993214.1 CDS Desal_3629 NC_012881.1 4055962 4057671 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: wsu:WS0052 hypothetical protein; ABC transporter 4055962..4057671 Desulfovibrio salexigens DSM 2638 8094562 YP_002993215.1 CDS Desal_3630 NC_012881.1 4057684 4058676 D PFAM: polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: abu:Abu_2243 UDP GlcNAc dehydratase/reductase PseB; polysaccharide biosynthesis protein CapD 4057684..4058676 Desulfovibrio salexigens DSM 2638 8094563 YP_002993216.1 CDS Desal_3631 NC_012881.1 4058686 4059831 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: dat:HRM2_36720 ArnB; glutamine--scyllo-inositol transaminase 4058686..4059831 Desulfovibrio salexigens DSM 2638 8094564 YP_002993217.1 CDS Desal_3632 NC_012881.1 4059836 4060534 D PFAM: acylneuraminate cytidylyltransferase; KEGG: dat:HRM2_36850 NeuA; N-acylneuraminate cytidylyltransferase 4059836..4060534 Desulfovibrio salexigens DSM 2638 8094565 YP_002993218.1 CDS Desal_3633 NC_012881.1 4060566 4061633 D PFAM: glycosyltransferase 28 domain; KEGG: dat:HRM2_36730 MurG2; glycosyltransferase 28 domain protein 4060566..4061633 Desulfovibrio salexigens DSM 2638 8094566 YP_002993219.1 CDS Desal_3634 NC_012881.1 4061775 4062845 D PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: cps:CPS_2097 NeuB protein; N-acylneuraminate-9-phosphate synthase 4061775..4062845 Desulfovibrio salexigens DSM 2638 8094567 YP_002993220.1 CDS Desal_3635 NC_012881.1 4062924 4063679 D KEGG: azc:AZC_1890 dTDP-6-deoxy-L-hexose 3-O-methyltransferase; dTDP-6-deoxy-L-hexose 3-O-methyltransferase 4062924..4063679 Desulfovibrio salexigens DSM 2638 8094568 YP_002993221.1 CDS Desal_3636 NC_012881.1 4063805 4064806 D PFAM: protein of unknown function DUF201; KEGG: msu:MS1491 carbamoyl phosphate synthase large subunit; hypothetical protein 4063805..4064806 Desulfovibrio salexigens DSM 2638 8094569 YP_002993222.1 CDS Desal_3637 NC_012881.1 4064790 4065476 D KEGG: asu:Asuc_0100 HAD family hydrolase; HAD family hydrolase 4064790..4065476 Desulfovibrio salexigens DSM 2638 8094570 YP_002993223.1 CDS Desal_3638 NC_012881.1 4065469 4066890 D KEGG: abc:ACICU_00082 hypothetical protein; hypothetical protein 4065469..4066890 Desulfovibrio salexigens DSM 2638 8094571 YP_002993224.1 CDS Desal_3639 NC_012881.1 4066991 4067257 D PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_2906 Fis family transcriptional regulator; transposase IS3/IS911 family protein 4066991..4067257 Desulfovibrio salexigens DSM 2638 8094572 YP_002993225.1 CDS Desal_3640 NC_012881.1 4067254 4068123 D PFAM: integrase catalytic region; KEGG: kpe:KPK_A0016 IS3 family element, transposase orfB; integrase catalytic region 4067254..4068123 Desulfovibrio salexigens DSM 2638 8094573 YP_002993226.1 CDS Desal_3641 NC_012881.1 4068154 4068699 R PFAM: methyltransferase type 11; KEGG: nam:NAMH_1782 SAM-dependent methyltransferase, UbiE/COQ5 family; methyltransferase type 11 complement(4068154..4068699) Desulfovibrio salexigens DSM 2638 8094574 YP_002993227.1 CDS Desal_3642 NC_012881.1 4068706 4069725 R KEGG: sat:SYN_01477 pentaglycine interpeptide bridge formation protein; hypothetical protein complement(4068706..4069725) Desulfovibrio salexigens DSM 2638 8094575 YP_002993228.1 CDS Desal_3643 NC_012881.1 4069916 4070923 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rpt:Rpal_4502 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(4069916..4070923) Desulfovibrio salexigens DSM 2638 8094576 YP_002993229.1 CDS Desal_3644 NC_012881.1 4071115 4073148 R PFAM: acyltransferase 3; KEGG: lpf:lpl0821 hypothetical protein; acyltransferase 3 complement(4071115..4073148) Desulfovibrio salexigens DSM 2638 8094577 YP_002993230.1 CDS Desal_3645 NC_012881.1 4073257 4075359 R KEGG: GK12566 gene product from transcript GK12566-RA; hypothetical protein complement(4073257..4075359) Desulfovibrio salexigens DSM 2638 8094578 YP_002993231.1 CDS Desal_3646 NC_012881.1 4075480 4077597 R KEGG: dvm:DvMF_0846 hypothetical protein; hypothetical protein complement(4075480..4077597) Desulfovibrio salexigens DSM 2638 8094579 YP_002993232.1 CDS Desal_3647 NC_012881.1 4077638 4079077 R PFAM: type II secretion system protein E; SMART: ATPase AAA; KEGG: rso:RSc3115 general secretion pathway protein E; type II secretion system protein E complement(4077638..4079077) Desulfovibrio salexigens DSM 2638 8094580 YP_002993233.1 CDS Desal_3648 NC_012881.1 4079129 4081144 R TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: dal:Dalk_5145 general secretion pathway protein D; general secretion pathway protein D complement(4079129..4081144) Desulfovibrio salexigens DSM 2638 8094581 YP_002993234.1 CDS Desal_3649 NC_012881.1 4081304 4081768 R PFAM: abortive infection protein; KEGG: tgr:Tgr7_0273 abortive infection protein; abortive infection protein complement(4081304..4081768) Desulfovibrio salexigens DSM 2638 8094582 YP_002993235.1 CDS Desal_3650 NC_012881.1 4081850 4082881 R PFAM: glycosyl transferase family 9; KEGG: dvm:DvMF_3035 glycosyl transferase family 9; glycosyl transferase family protein complement(4081850..4082881) Desulfovibrio salexigens DSM 2638 8094583 YP_002993236.1 CDS Desal_3651 NC_012881.1 4083166 4083750 D KEGG: dvm:DvMF_2797 hypothetical protein; hypothetical protein 4083166..4083750 Desulfovibrio salexigens DSM 2638 8094584 YP_002993237.1 CDS Desal_3652 NC_012881.1 4083971 4084945 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: pst:PSPTO_1916 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-ketoacyl-ACP synthase III 4083971..4084945 Desulfovibrio salexigens DSM 2638 8094585 YP_002993238.1 CDS Desal_3653 NC_012881.1 4085004 4085603 R KEGG: dvl:Dvul_3030 adenylyl-sulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase; adenylylsulfate kinase complement(4085004..4085603) Desulfovibrio salexigens DSM 2638 8094586 YP_002993239.1 CDS Desal_3654 NC_012881.1 4085608 4087302 R PFAM: MscS Mechanosensitive ion channel; KEGG: dps:DP1066 hypothetical protein; mechanosensitive ion channel MscS complement(4085608..4087302) Desulfovibrio salexigens DSM 2638 8094587 YP_002993240.1 CDS Desal_3655 NC_012881.1 4087387 4088484 R KEGG: gbm:Gbem_2378 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(4087387..4088484) Desulfovibrio salexigens DSM 2638 8094588 YP_002993241.1 CDS Desal_3656 NC_012881.1 4088502 4089821 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(4088502..4089821) Desulfovibrio salexigens DSM 2638 8094589 YP_002993242.1 CDS Desal_3657 NC_012881.1 4089918 4091372 R TIGRFAM: MJ0042 family finger-like protein; KEGG: dde:Dde_2111 hypothetical protein; hypothetical protein complement(4089918..4091372) Desulfovibrio salexigens DSM 2638 8094590 YP_002993243.1 CDS Desal_3658 NC_012881.1 4091448 4091972 R KEGG: dde:Dde_2112 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(4091448..4091972) Desulfovibrio salexigens DSM 2638 8094591 YP_002993244.1 CDS Desal_3659 NC_012881.1 4091988 4092449 R PFAM: GCN5-related N-acetyltransferase; KEGG: dvm:DvMF_0474 acetyltransferase; N-acetyltransferase GCN5 complement(4091988..4092449) Desulfovibrio salexigens DSM 2638 8094592 YP_002993245.1 CDS Desal_3660 NC_012881.1 4092456 4092941 R PFAM: redoxin; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; KEGG: dds:Ddes_1441 redoxin domain protein; redoxin complement(4092456..4092941) Desulfovibrio salexigens DSM 2638 8094593 YP_002993246.1 CDS Desal_3661 NC_012881.1 4093032 4095452 R PFAM: homocysteine S-methyltransferase; cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; dihydropteroate synthase DHPS; KEGG: dde:Dde_2115 methionine synthase (B12-dependent); homocysteine S-methyltransferase complement(4093032..4095452) Desulfovibrio salexigens DSM 2638 8094594 YP_002993247.1 CDS Desal_3662 NC_012881.1 4095806 4096774 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: dvm:DvMF_0477 RNA polymerase, sigma 70 family subunit; RNA polymerase sigma 70 family subunit 4095806..4096774 Desulfovibrio salexigens DSM 2638 8094595 YP_002993248.1 CDS Desal_3663 NC_012881.1 4096767 4097555 D KEGG: sfu:Sfum_3247 hypothetical protein; hypothetical protein 4096767..4097555 Desulfovibrio salexigens DSM 2638 8094596 YP_002993249.1 CDS Desal_3664 NC_012881.1 4097552 4099303 D PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: dvm:DvMF_0478 hypothetical protein; hypothetical protein 4097552..4099303 Desulfovibrio salexigens DSM 2638 8094597 YP_002993250.1 CDS Desal_3665 NC_012881.1 4099300 4100094 D KEGG: dde:Dde_2118 hypothetical protein; hypothetical protein 4099300..4100094 Desulfovibrio salexigens DSM 2638 8094598 YP_002993251.1 CDS Desal_3666 NC_012881.1 4100125 4100448 D KEGG: dvm:DvMF_0480 hypothetical protein; hypothetical protein 4100125..4100448 Desulfovibrio salexigens DSM 2638 8094599 YP_002993252.1 CDS Desal_3667 NC_012881.1 4100722 4101153 D KEGG: dvl:Dvul_1553 RpiB/LacA/LacB family sugar-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 4100722..4101153 Desulfovibrio salexigens DSM 2638 8094601 YP_002993253.1 CDS Desal_3668 NC_012881.1 4101291 4103270 D TIGRFAM: transketolase; PFAM: transketolase; transketolase; KEGG: dat:HRM2_48140 Tkt1; transketolase 4101291..4103270 Desulfovibrio salexigens DSM 2638 8094602 YP_002993254.1 CDS Desal_3669 NC_012881.1 4103347 4105722 R KEGG: ppd:Ppro_2358 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(4103347..4105722) Desulfovibrio salexigens DSM 2638 8094603 YP_002993255.1 CDS Desal_3670 NC_012881.1 4106068 4107885 D KEGG: ppf:Pput_3927 hypothetical protein; hypothetical protein 4106068..4107885 Desulfovibrio salexigens DSM 2638 8093750 YP_002993256.1 CDS Desal_3671 NC_012881.1 4107960 4108928 D PFAM: glycosyl transferase family 2; KEGG: rme:Rmet_6128 glycosyl transferase, family 2; family 2 glycosyl transferase 4107960..4108928 Desulfovibrio salexigens DSM 2638 8093171 YP_002993257.1 CDS Desal_3672 NC_012881.1 4108991 4109683 D PFAM: methyltransferase type 12; KEGG: pzu:PHZ_c0481 UbiE/COQ5 methyltransferase; methyltransferase type 12 4108991..4109683 Desulfovibrio salexigens DSM 2638 8093172 YP_002993258.1 CDS Desal_3673 NC_012881.1 4109758 4110039 R KEGG: dat:HRM2_44200 hypothetical protein; hypothetical protein complement(4109758..4110039) Desulfovibrio salexigens DSM 2638 8093173 YP_002993259.1 CDS Desal_3674 NC_012881.1 4110190 4110405 R KEGG: dde:Dde_0316 hypothetical protein; hypothetical protein complement(4110190..4110405) Desulfovibrio salexigens DSM 2638 8093174 YP_002993260.1 CDS Desal_3675 NC_012881.1 4110460 4114146 R PFAM: protein of unknown function DUF748; KEGG: dde:Dde_0225 hypothetical protein; hypothetical protein complement(4110460..4114146) Desulfovibrio salexigens DSM 2638 8093175 YP_002993261.1 CDS Desal_3676 NC_012881.1 4114308 4114916 D KEGG: dvm:DvMF_1457 hypothetical protein; hypothetical protein 4114308..4114916 Desulfovibrio salexigens DSM 2638 8093176 YP_002993262.1 CDS Desal_3677 NC_012881.1 4114930 4117122 D KEGG: dde:Dde_3000 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4114930..4117122 Desulfovibrio salexigens DSM 2638 8093177 YP_002993263.1 CDS Desal_3678 NC_012881.1 4117226 4118623 D KEGG: dvm:DvMF_1460 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; Metal-dependent hydrolase HDOD; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; PAS domain containing protein; PAS/PAC sensor protein 4117226..4118623 Desulfovibrio salexigens DSM 2638 8093178 YP_002993264.1 CDS Desal_3679 NC_012881.1 4118624 4120015 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; ATPase AAA; KEGG: dde:Dde_3003 two component Fis family transcriptional regulator; Fis family transcriptional regulator 4118624..4120015 Desulfovibrio salexigens DSM 2638 8093179 YP_002993265.1 CDS Desal_3680 NC_012881.1 4120028 4120732 R PFAM: carbonic anhydrase; KEGG: dvm:DvMF_2396 carbonic anhydrase; carbonic anhydrase complement(4120028..4120732) Desulfovibrio salexigens DSM 2638 8093180 YP_002993266.1 CDS Desal_3681 NC_012881.1 4121004 4122149 R KEGG: bba:Bd2942 hypothetical protein; hypothetical protein complement(4121004..4122149) Desulfovibrio salexigens DSM 2638 8093181 YP_002993267.1 CDS Desal_3682 NC_012881.1 4122152 4124860 R PFAM: CoA-binding domain protein; GCN5-related N-acetyltransferase; KEGG: dvm:DvMF_1776 GCN5-related N-acetyltransferase; CoA-binding protein complement(4122152..4124860) Desulfovibrio salexigens DSM 2638 8093182 YP_002993268.1 CDS Desal_3683 NC_012881.1 4125085 4127061 D TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: dde:Dde_3207 acetyl-coenzyme A synthetase; acetate/CoA ligase 4125085..4127061 Desulfovibrio salexigens DSM 2638 8093183 YP_002993269.1 CDS Desal_3684 NC_012881.1 4127065 4127517 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sat:SYN_02087 cytoplasmic protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4127065..4127517 Desulfovibrio salexigens DSM 2638 8093184 YP_002993270.1 CDS Desal_3685 NC_012881.1 4127622 4130156 D KEGG: dal:Dalk_5017 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; Cache type 2 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4127622..4130156 Desulfovibrio salexigens DSM 2638 8093185 YP_002993271.1 CDS Desal_3686 NC_012881.1 4130115 4131572 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: glo:Glov_0136 multi-sensor signal transduction histidine kinase; histidine kinase complement(4130115..4131572) Desulfovibrio salexigens DSM 2638 8093186 YP_002993272.1 CDS Desal_3687 NC_012881.1 4131612 4132355 R PFAM: cobalamin-5-phosphate synthase CobS; KEGG: dvl:Dvul_2070 cobalamin-5-phosphate synthase CobS; cobalamin-5-phosphate synthase CobS complement(4131612..4132355) Desulfovibrio salexigens DSM 2638 8093187 YP_002993273.1 CDS Desal_3688 NC_012881.1 4132340 4133158 R PFAM: protein of unknown function DUF62; KEGG: dvm:DvMF_1391 protein of unknown function DUF62; hypothetical protein complement(4132340..4133158) Desulfovibrio salexigens DSM 2638 8093188 YP_002993274.1 CDS Desal_3689 NC_012881.1 4133161 4134066 R PFAM: protein of unknown function DUF161; KEGG: dat:HRM2_11660 hypothetical protein; hypothetical protein complement(4133161..4134066) Desulfovibrio salexigens DSM 2638 8093189 YP_002993275.1 CDS argS NC_012881.1 4134393 4136036 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 4134393..4136036 Desulfovibrio salexigens DSM 2638 8093190 YP_002993276.1 CDS Desal_3691 NC_012881.1 4136056 4136787 D PFAM: sporulation domain protein; KEGG: dvl:Dvul_1815 sporulation domain-containing protein; sporulation domain protein 4136056..4136787 Desulfovibrio salexigens DSM 2638 8093191 YP_002993277.1 CDS Desal_3692 NC_012881.1 4136858 4137178 D hypothetical protein 4136858..4137178 Desulfovibrio salexigens DSM 2638 8093192 YP_002993278.1 CDS Desal_3693 NC_012881.1 4137163 4138014 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: scl:sce1591 hypothetical protein; hypothetical protein complement(4137163..4138014) Desulfovibrio salexigens DSM 2638 8093193 YP_002993279.1 CDS Desal_3694 NC_012881.1 4138250 4140040 R KEGG: sfu:Sfum_2891 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS/PAC sensor signal transduction histidine kinase complement(4138250..4140040) Desulfovibrio salexigens DSM 2638 8093194 YP_002993280.1 CDS Desal_3695 NC_012881.1 4140204 4140896 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dde:Dde_2387 two component transcriptional regulator; transcriptional regulator complement(4140204..4140896) Desulfovibrio salexigens DSM 2638 8093195 YP_002993281.1 CDS Desal_3696 NC_012881.1 4140967 4142805 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: rme:Rmet_3973 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4140967..4142805) Desulfovibrio salexigens DSM 2638 8093196 YP_002993282.1 CDS Desal_3697 NC_012881.1 4142846 4144033 R PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: mca:MCA0833 response regulator; response regulator receiver modulated serine phosphatase complement(4142846..4144033) Desulfovibrio salexigens DSM 2638 8093197 YP_002993283.1 CDS Desal_3698 NC_012881.1 4144036 4145049 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(4144036..4145049) Desulfovibrio salexigens DSM 2638 8093198 YP_002993284.1 CDS Desal_3699 NC_012881.1 4145046 4147907 R PFAM: response regulator receiver; CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: mms:mma_0014 CheA chemotaxis protein; CheA signal transduction histidine kinase complement(4145046..4147907) Desulfovibrio salexigens DSM 2638 8093199 YP_002993285.1 CDS Desal_3700 NC_012881.1 4147950 4148606 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: bte:BTH_II0504 chemotaxis protein CheW; CheW protein complement(4147950..4148606) Desulfovibrio salexigens DSM 2638 8093200 YP_002993286.1 CDS Desal_3701 NC_012881.1 4148606 4149889 R KEGG: pfs:PFLU1221 chemotaxis-related methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR complement(4148606..4149889) Desulfovibrio salexigens DSM 2638 8093201 YP_002993287.1 CDS Desal_3702 NC_012881.1 4149893 4150378 R PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: mms:mma_0017 CheW purine-binding chemotaxis protein; CheW protein complement(4149893..4150378) Desulfovibrio salexigens DSM 2638 8093202 YP_002993288.1 CDS Desal_3703 NC_012881.1 4150381 4152600 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: pfs:PFLU1219 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4150381..4152600) Desulfovibrio salexigens DSM 2638 8093203 YP_002993289.1 CDS Desal_3704 NC_012881.1 4152875 4153090 D hypothetical protein 4152875..4153090 Desulfovibrio salexigens DSM 2638 8093204 YP_002993290.1 CDS Desal_3705 NC_012881.1 4153192 4153677 R KEGG: dvm:DvMF_2842 hypothetical protein; hypothetical protein complement(4153192..4153677) Desulfovibrio salexigens DSM 2638 8093205 YP_002993291.1 CDS Desal_3707 NC_012881.1 4154359 4155291 R PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: shl:Shal_1398 methyltransferase type 12; methyltransferase type 12 complement(4154359..4155291) Desulfovibrio salexigens DSM 2638 8093207 YP_002993292.1 CDS dapF NC_012881.1 4155531 4156376 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(4155531..4156376) Desulfovibrio salexigens DSM 2638 8093208 YP_002993293.1 CDS Desal_3709 NC_012881.1 4156446 4157126 R TIGRFAM: hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: dde:Dde_1833 hypothetical protein; hypothetical protein complement(4156446..4157126) Desulfovibrio salexigens DSM 2638 8093209 YP_002993294.1 CDS Desal_3710 NC_012881.1 4157407 4158879 R KEGG: dde:Dde_1834 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(4157407..4158879) Desulfovibrio salexigens DSM 2638 8093210 YP_002993295.1 CDS Desal_3711 NC_012881.1 4159207 4160865 D PFAM: glycosyl transferase group 1; KEGG: dvm:DvMF_0508 glycosyl transferase group 1; group 1 glycosyl transferase 4159207..4160865 Desulfovibrio salexigens DSM 2638 8093211 YP_002993296.1 CDS Desal_3712 NC_012881.1 4160859 4161944 D PFAM: glycosyl transferase group 1; KEGG: dvu:DVU1803 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 4160859..4161944 Desulfovibrio salexigens DSM 2638 8093212 YP_002993297.1 CDS Desal_3713 NC_012881.1 4162165 4163130 D PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: dde:Dde_0391 response regulator receiver (CheY-like) modulated CheW protein; response regulator receiver modulated CheW protein 4162165..4163130 Desulfovibrio salexigens DSM 2638 8093213 YP_002993298.1 CDS Desal_3714 NC_012881.1 4163209 4163955 R PFAM: protein of unknown function DUF152; KEGG: dvl:Dvul_2619 hypothetical protein; hypothetical protein complement(4163209..4163955) Desulfovibrio salexigens DSM 2638 8093214 YP_002993299.1 CDS Desal_3715 NC_012881.1 4163943 4164527 R TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: dvl:Dvul_2618 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(4163943..4164527) Desulfovibrio salexigens DSM 2638 8093215 YP_002993300.1 CDS Desal_3716 NC_012881.1 4164740 4165411 D PFAM: metallophosphoesterase; KEGG: dds:Ddes_0792 metallophosphoesterase; metallophosphoesterase 4164740..4165411 Desulfovibrio salexigens DSM 2638 8093216 YP_002993301.1 CDS Desal_3717 NC_012881.1 4165414 4165884 D PFAM: protein of unknown function DUF163; KEGG: dde:Dde_2291 hypothetical protein; hypothetical protein 4165414..4165884 Desulfovibrio salexigens DSM 2638 8093217 YP_002993302.1 CDS Desal_3718 NC_012881.1 4166050 4166274 D KEGG: dde:Dde_2292 hypothetical protein; hypothetical protein 4166050..4166274 Desulfovibrio salexigens DSM 2638 8093218 YP_002993303.1 CDS Desal_3719 NC_012881.1 4166400 4167086 R TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: dvl:Dvul_1812 glucose inhibited division protein; methyltransferase GidB complement(4166400..4167086) Desulfovibrio salexigens DSM 2638 8093219 YP_002993304.1 CDS Desal_3720 NC_012881.1 4167086 4168510 R PFAM: major facilitator superfamily MFS_1; KEGG: dde:Dde_2729 drug resistance transporter; major facilitator superfamily protein complement(4167086..4168510) Desulfovibrio salexigens DSM 2638 8093220 YP_002993305.1 CDS Desal_3721 NC_012881.1 4168531 4168989 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dps:DP1862 transcriptional regulator; MarR family transcriptional regulator complement(4168531..4168989) Desulfovibrio salexigens DSM 2638 8093221 YP_002993306.1 CDS Desal_3722 NC_012881.1 4169180 4170655 D PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: dal:Dalk_0736 two component, sigma54 specific, transcriptional regulator, Fis family; Fis family transcriptional regulator 4169180..4170655 Desulfovibrio salexigens DSM 2638 8093222 YP_002993307.1 CDS Desal_3723 NC_012881.1 4170721 4171350 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(4170721..4171350) Desulfovibrio salexigens DSM 2638 8093223 YP_002993308.1 CDS Desal_3724 NC_012881.1 4171703 4172026 R TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: dvl:Dvul_2067 ATP synthase F0, C subunit; ATP synthase F0 subunit C complement(4171703..4172026) Desulfovibrio salexigens DSM 2638 8093224 YP_002993309.1 CDS Desal_3725 NC_012881.1 4172101 4172787 R TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: dvm:DvMF_1388 ATP synthase F0, A subunit; ATP synthase F0 subunit A complement(4172101..4172787) Desulfovibrio salexigens DSM 2638 8093225 YP_002993310.1 CDS Desal_3726 NC_012881.1 4172793 4173215 R PFAM: ATP synthase I; KEGG: dvm:DvMF_1387 ATP synthase I; ATP synthase I complement(4172793..4173215) Desulfovibrio salexigens DSM 2638 8093226 YP_002993311.1 CDS Desal_3727 NC_012881.1 4173193 4173462 R KEGG: dvm:DvMF_1386 ATP synthase protein I; hypothetical protein complement(4173193..4173462) Desulfovibrio salexigens DSM 2638 8093227 YP_002993312.1 CDS Desal_3728 NC_012881.1 4173910 4176321 D KEGG: dvm:DvMF_0590 ATP-dependent protease; ATP-dependent protease 4173910..4176321 Desulfovibrio salexigens DSM 2638 8093228 YP_002993313.1 CDS Desal_3729 NC_012881.1 4176340 4177110 D KEGG: dvm:DvMF_1550 hypothetical protein; hypothetical protein 4176340..4177110 Desulfovibrio salexigens DSM 2638 8093229 YP_002993314.1 CDS Desal_3730 NC_012881.1 4177155 4177637 D KEGG: geo:Geob_2662 peptidoglycan-binding LysM; hypothetical protein 4177155..4177637 Desulfovibrio salexigens DSM 2638 8093230 YP_002993315.1 CDS Desal_3731 NC_012881.1 4177787 4178935 D PFAM: ion transporter ; TrkA-N domain protein; KEGG: dat:HRM2_17570 calcium-activated potassium channel (Kef-type K+ transport protein); ion transporter 4177787..4178935 Desulfovibrio salexigens DSM 2638 8093231 YP_002993316.1 CDS Desal_3732 NC_012881.1 4178928 4179443 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: scl:sce6484 phosphoprotein phosphatase; Crp/Fnr family transcriptional regulator 4178928..4179443 Desulfovibrio salexigens DSM 2638 8093232 YP_002993317.1 CDS Desal_3733 NC_012881.1 4179513 4179794 R KEGG: met:M446_0096 hypothetical protein; hypothetical protein complement(4179513..4179794) Desulfovibrio salexigens DSM 2638 8093233 YP_002993318.1 CDS Desal_3734 NC_012881.1 4179891 4180586 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: dat:HRM2_24100 Crp; Crp/Fnr family transcriptional regulator complement(4179891..4180586) Desulfovibrio salexigens DSM 2638 8093234 YP_002993319.1 CDS Desal_3735 NC_012881.1 4180834 4181703 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; sporulation domain protein; KEGG: ccv:CCV52592_0458 30S ribosomal protein S16 (BS17); rare lipoprotein A 4180834..4181703 Desulfovibrio salexigens DSM 2638 8093235 YP_002993320.1 CDS Desal_3736 NC_012881.1 4181898 4182191 R PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: dde:Dde_0517 histone-like DNA-binding protein; histone family protein DNA-binding protein complement(4181898..4182191) Desulfovibrio salexigens DSM 2638 8093236 YP_002993321.1 CDS Desal_3737 NC_012881.1 4182322 4182744 R PFAM: histidine triad (HIT) protein; KEGG: dvl:Dvul_2539 histidine triad (HIT) protein; histidine triad (HIT) protein complement(4182322..4182744) Desulfovibrio salexigens DSM 2638 8093237 YP_002993322.1 CDS Desal_3738 NC_012881.1 4182921 4183955 D PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dvl:Dvul_2540 radical SAM domain-containing protein; radical SAM domain protein 4182921..4183955 Desulfovibrio salexigens DSM 2638 8093238 YP_002993323.1 CDS Desal_3739 NC_012881.1 4184127 4185794 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dde:Dde_0210 AhpF family protein/thioredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4184127..4185794 Desulfovibrio salexigens DSM 2638 8093239 YP_002993324.1 CDS Desal_3740 NC_012881.1 4185842 4186723 R PFAM: alpha/beta hydrolase fold; KEGG: rpt:Rpal_0351 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4185842..4186723) Desulfovibrio salexigens DSM 2638 8093240 YP_002993325.1 CDS Desal_3741 NC_012881.1 4186755 4188320 R KEGG: lhk:LHK_01552 hypothetical protein; hypothetical protein complement(4186755..4188320) Desulfovibrio salexigens DSM 2638 8093241 YP_002993326.1 CDS Desal_3742 NC_012881.1 4188587 4189606 R KEGG: dde:Dde_3736 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I complement(4188587..4189606) Desulfovibrio salexigens DSM 2638 8093242 YP_002993327.1 CDS Desal_3743 NC_012881.1 4189632 4190192 R PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: dde:Dde_3737 hypothetical protein; GAF sensor protein complement(4189632..4190192) Desulfovibrio salexigens DSM 2638 8093243 YP_002993328.1 CDS Desal_3744 NC_012881.1 4190664 4191950 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_0265 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin complement(4190664..4191950) Desulfovibrio salexigens DSM 2638 8093244 YP_002993329.1 CDS Desal_3745 NC_012881.1 4191994 4193466 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: dal:Dalk_4757 transcriptional regulator, GntR family with aminotransferase domain; GntR family transcriptional regulator complement(4191994..4193466) Desulfovibrio salexigens DSM 2638 8093245 YP_002993330.1 CDS Desal_3746 NC_012881.1 4193717 4194307 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vvu:VV2_1051 threonine efflux protein; lysine exporter protein LysE/YggA 4193717..4194307 Desulfovibrio salexigens DSM 2638 8093246 YP_002993331.1 CDS Desal_3747 NC_012881.1 4194411 4195289 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: dat:HRM2_44930 YwkC; 6-phosphogluconate dehydrogenase 4194411..4195289 Desulfovibrio salexigens DSM 2638 8093247 YP_002993332.1 CDS Desal_3748 NC_012881.1 4195421 4196434 D KEGG: wsu:WS1133 CiaB protein; CiaB protein 4195421..4196434 Desulfovibrio salexigens DSM 2638 8093248 YP_002993333.1 CDS Desal_3749 NC_012881.1 4196437 4196865 D TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: tgr:Tgr7_0602 hypothetical protein; death-on-curing family protein 4196437..4196865 Desulfovibrio salexigens DSM 2638 8093249 YP_002993334.1 CDS Desal_3750 NC_012881.1 4197092 4197571 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(4197092..4197571) Desulfovibrio salexigens DSM 2638 8093251 YP_002993335.1 CDS Desal_3751 NC_012881.1 4197696 4198391 R PFAM: purine or other phosphorylase family 1; KEGG: dps:DP0528 MTA/SAH nucleosidase; adenosylhomocysteine nucleosidase complement(4197696..4198391) Desulfovibrio salexigens DSM 2638 8093578 YP_002993336.1 CDS Desal_3752 NC_012881.1 4198539 4199486 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dal:Dalk_2139 transcriptional regulator, LysR family; LysR family transcriptional regulator 4198539..4199486 Desulfovibrio salexigens DSM 2638 8093579 YP_002993337.1 CDS Desal_3753 NC_012881.1 4199714 4201480 R KEGG: sfu:Sfum_1479 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase complement(4199714..4201480) Desulfovibrio salexigens DSM 2638 8093581 YP_002993338.1 CDS Desal_3754 NC_012881.1 4201480 4201899 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_2944 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin complement(4201480..4201899) Desulfovibrio salexigens DSM 2638 8093582 YP_002993339.1 CDS Desal_3755 NC_012881.1 4202285 4202554 D KEGG: dvm:DvMF_0238 hypothetical protein; hypothetical protein 4202285..4202554 Desulfovibrio salexigens DSM 2638 8093583 YP_002993340.1 CDS Desal_3756 NC_012881.1 4202722 4202991 D KEGG: dvm:DvMF_0238 hypothetical protein; hypothetical protein 4202722..4202991 Desulfovibrio salexigens DSM 2638 8093584 YP_002993341.1 CDS Desal_3757 NC_012881.1 4203058 4203981 R PFAM: acyl transferase; KEGG: dvl:Dvul_1813 malonyl CoA-acyl carrier protein transacylase; acyl transferase complement(4203058..4203981) Desulfovibrio salexigens DSM 2638 8093585 YP_002993342.1 CDS Desal_3758 NC_012881.1 4204240 4205355 D PFAM: domain of unknown function DUF1745; KEGG: tau:Tola_1387 domain of unknown function DUF1745; hypothetical protein 4204240..4205355 Desulfovibrio salexigens DSM 2638 8093586 YP_002993343.1 CDS Desal_3759 NC_012881.1 4205352 4206227 D KEGG: sfu:Sfum_1120 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 4205352..4206227 Desulfovibrio salexigens DSM 2638 8093587 YP_002993344.1 CDS Desal_3760 NC_012881.1 4206229 4206588 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dde:Dde_0603 response regulator receiver domain-containing protein; response regulator receiver protein complement(4206229..4206588) Desulfovibrio salexigens DSM 2638 8093588 YP_002993345.1 CDS Desal_3761 NC_012881.1 4207010 4208518 D PFAM: sodium:neurotransmitter symporter; KEGG: dat:HRM2_44940 Na+-dependent transporter; sodium:neurotransmitter symporter 4207010..4208518 Desulfovibrio salexigens DSM 2638 8093589 YP_002993346.1 CDS Desal_3762 NC_012881.1 4208522 4208617 D KEGG: vha:VIBHAR_02897 hypothetical protein; hypothetical protein 4208522..4208617 Desulfovibrio salexigens DSM 2638 8093590 YP_002993347.1 CDS Desal_3763 NC_012881.1 4208997 4209506 D PFAM: nitroreductase; KEGG: dvm:DvMF_2975 nitroreductase; nitroreductase 4208997..4209506 Desulfovibrio salexigens DSM 2638 8093591 YP_002993348.1 CDS Desal_3764 NC_012881.1 4209584 4210276 R PFAM: dienelactone hydrolase; phospholipase/carboxylesterase; KEGG: dvm:DvMF_3032 dienelactone hydrolase; dienelactone hydrolase complement(4209584..4210276) Desulfovibrio salexigens DSM 2638 8093592 YP_002993349.1 CDS Desal_3765 NC_012881.1 4210283 4211233 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: tbd:Tbd_1114 cation efflux protein; cation diffusion facilitator family transporter complement(4210283..4211233) Desulfovibrio salexigens DSM 2638 8093593 YP_002993350.1 CDS Desal_3766 NC_012881.1 4211638 4212879 D PFAM: sodium:dicarboxylate symporter; KEGG: ppr:PBPRB1848 serine/threonine transporter SstT; sodium:dicarboxylate symporter 4211638..4212879 Desulfovibrio salexigens DSM 2638 8093594 YP_002993351.1 CDS Desal_3767 NC_012881.1 4212980 4215856 D PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dde:Dde_3603 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 4212980..4215856 Desulfovibrio salexigens DSM 2638 8093595 YP_002993352.1 CDS Desal_3768 NC_012881.1 4215876 4216532 D PFAM: MORN variant repeat protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein; MORN variant repeat protein 4215876..4216532 Desulfovibrio salexigens DSM 2638 8093596 YP_002993353.1 CDS Desal_3769 NC_012881.1 4216578 4217951 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: dde:Dde_3599 two component Fis family transcriptional regulator; Fis family transcriptional regulator complement(4216578..4217951) Desulfovibrio salexigens DSM 2638 8093597 YP_002993354.1 CDS Desal_3770 NC_012881.1 4217955 4219388 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dvm:DvMF_2201 integral membrane sensor signal transduction histidine kinase; histidine kinase complement(4217955..4219388) Desulfovibrio salexigens DSM 2638 8093598 YP_002993355.1 CDS Desal_3771 NC_012881.1 4219624 4220967 R PFAM: phosphoglucose isomerase (PGI); KEGG: dvm:DvMF_2202 glucose-6-phosphate isomerase; phosphoglucose isomerase complement(4219624..4220967) Desulfovibrio salexigens DSM 2638 8093599 YP_002993356.1 CDS Desal_3772 NC_012881.1 4221068 4222243 R PFAM: aminotransferase class I and II; KEGG: dvm:DvMF_2204 aminotransferase class I and II; class I and II aminotransferase complement(4221068..4222243) Desulfovibrio salexigens DSM 2638 8093600 YP_002993357.1 CDS Desal_3773 NC_012881.1 4222576 4222929 D hypothetical protein 4222576..4222929 Desulfovibrio salexigens DSM 2638 8093601 YP_002993358.1 CDS Desal_3774 NC_012881.1 4222950 4223639 D KEGG: dde:Dde_0114 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA; cell division ATP-binding protein FtsE 4222950..4223639 Desulfovibrio salexigens DSM 2638 8093602 YP_002993359.1 CDS Desal_3775 NC_012881.1 4223633 4224514 D PFAM: protein of unknown function DUF214; KEGG: dvm:DvMF_2033 protein of unknown function DUF214; hypothetical protein 4223633..4224514 Desulfovibrio salexigens DSM 2638 8093603 YP_002993360.1 CDS Desal_3776 NC_012881.1 4224814 4226481 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 4224814..4226481 Desulfovibrio salexigens DSM 2638 8093604 YP_002993361.1 CDS Desal_3777 NC_012881.1 4226569 4227525 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: mca:MCA1165 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase complement(4226569..4227525) Desulfovibrio salexigens DSM 2638 8093605 YP_002993362.1 CDS Desal_3778 NC_012881.1 4227750 4228853 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP1667 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 4227750..4228853 Desulfovibrio salexigens DSM 2638 8093606 YP_002993363.1 CDS Desal_3779 NC_012881.1 4229136 4229813 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: sfu:Sfum_3208 haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(4229136..4229813) Desulfovibrio salexigens DSM 2638 8093607 YP_002993364.1 CDS Desal_3780 NC_012881.1 4229925 4231067 D TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: noc:Noc_0982 geranylgeranyl reductase; geranylgeranyl reductase 4229925..4231067 Desulfovibrio salexigens DSM 2638 8093608 YP_002993365.1 CDS Desal_3781 NC_012881.1 4231110 4231988 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: dat:HRM2_13600 hypothetical protein; hypothetical protein complement(4231110..4231988) Desulfovibrio salexigens DSM 2638 8093609 YP_002993366.1 CDS Desal_3782 NC_012881.1 4232224 4233399 R PFAM: protein of unknown function DUF39; KEGG: dvm:DvMF_1464 protein of unknown function DUF39; hypothetical protein complement(4232224..4233399) Desulfovibrio salexigens DSM 2638 8093610 YP_002993367.1 CDS Desal_3783 NC_012881.1 4233747 4235051 D PFAM: chromosomal replication initiator DnaA domain; chromosomal replication initiator DnaA; SMART: chromosomal replication initiator DnaA domain; KEGG: dde:Dde_0001 chromosomal replication initiator protein DnaA; chromosomal replication initiator DnaA domain-containing protein 4233747..4235051 Desulfovibrio salexigens DSM 2638 8093611 YP_002993368.1 CDS Desal_3784 NC_012881.1 4235186 4236349 D KEGG: dvm:DvMF_2082 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain; DNA polymerase III subunit beta 4235186..4236349 Desulfovibrio salexigens DSM 2638 8093612 YP_002993369.1 CDS Desal_3785 NC_012881.1 4236349 4238745 D KEGG: dde:Dde_0003 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; DNA gyrase subunit B 4236349..4238745 Desulfovibrio salexigens DSM 2638 8093613 YP_002993370.1 CDS Desal_3786 NC_012881.1 4238758 4241211 D KEGG: dde:Dde_0004 DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A; DNA gyrase subunit A 4238758..4241211 Desulfovibrio salexigens DSM 2638 8093614 YP_002993371.1 CDS Desal_3787 NC_012881.1 4241211 4241999 D PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: dde:Dde_0005 lipoprotein; hypothetical protein 4241211..4241999 Desulfovibrio salexigens DSM 2638 8093615 YP_002993372.1 CDS Desal_3788 NC_012881.1 4242034 4242528 D PFAM: YfbU family protein; KEGG: pmr:PMI1769 hypothetical protein; hypothetical protein 4242034..4242528 Desulfovibrio salexigens DSM 2638 8093616 YP_002993373.1 CDS Desal_3789 NC_012881.1 4242584 4243474 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_22181 transcriptional regulator; LysR family transcriptional regulator complement(4242584..4243474) Desulfovibrio salexigens DSM 2638 8093617 YP_002993374.1 CDS Desal_3790 NC_012881.1 4243550 4243897 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: dps:DP2053 hypothetical protein; alkylhydroperoxidase 4243550..4243897 Desulfovibrio salexigens DSM 2638 8093618 YP_002993375.1 CDS Desal_3791 NC_012881.1 4243946 4245049 R hypothetical protein complement(4243946..4245049) Desulfovibrio salexigens DSM 2638 8093619 YP_002993376.1 CDS Desal_3792 NC_012881.1 4245156 4246499 R KEGG: dde:Dde_0104 L-glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase, type I complement(4245156..4246499) Desulfovibrio salexigens DSM 2638 8093620 YP_002993377.1 CDS Desal_3793 NC_012881.1 4246688 4247638 R KEGG: dde:Dde_3779 MerR family transcriptional regulator; hypothetical protein complement(4246688..4247638) Desulfovibrio salexigens DSM 2638 8093621 YP_002993378.1 CDS Desal_3794 NC_012881.1 4248038 4248193 R hypothetical protein complement(4248038..4248193) Desulfovibrio salexigens DSM 2638 8093622 YP_002993379.1 CDS Desal_3795 NC_012881.1 4248271 4249146 R KEGG: dde:Dde_3566 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain; ATP phosphoribosyltransferase complement(4248271..4249146) Desulfovibrio salexigens DSM 2638 8093623 YP_002993380.1 CDS hisI NC_012881.1 4249146 4249520 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(4249146..4249520) Desulfovibrio salexigens DSM 2638 8093624 YP_002993381.1 CDS Desal_3797 NC_012881.1 4249681 4250121 R PFAM: ferric-uptake regulator; KEGG: dde:Dde_2676 ferric uptake regulator family protein; ferric uptake regulator, Fur family complement(4249681..4250121) Desulfovibrio salexigens DSM 2638 8093625 YP_002993382.1 CDS Desal_3798 NC_012881.1 4250346 4250735 D KEGG: dal:Dalk_4092 hypothetical protein; hypothetical protein 4250346..4250735 Desulfovibrio salexigens DSM 2638 8093626 YP_002993383.1 CDS Desal_3799 NC_012881.1 4250910 4252268 D TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; KEGG: dde:Dde_2771 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 4250910..4252268 Desulfovibrio salexigens DSM 2638 8093627 YP_002993384.1 CDS Desal_3800 NC_012881.1 4252285 4254957 D KEGG: tgr:Tgr7_1864 diguanylate cyclase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; CHASE domain protein; ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4252285..4254957 Desulfovibrio salexigens DSM 2638 8093628 YP_002993385.1 CDS Desal_3801 NC_012881.1 4254972 4256030 D PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; KEGG: dat:HRM2_33390 two-component transcriptional regulatory protein; response regulator receiver modulated metal dependent phosphohydrolase 4254972..4256030 Desulfovibrio salexigens DSM 2638 8093629 YP_002993386.1 CDS Desal_3802 NC_012881.1 4256197 4256835 D PFAM: regulatory protein TetR; KEGG: dde:Dde_1561 TetR family transcriptional regulator; TetR family transcriptional regulator 4256197..4256835 Desulfovibrio salexigens DSM 2638 8093630 YP_002993387.1 CDS Desal_3803 NC_012881.1 4256825 4257841 D TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: dde:Dde_1562 secretion protein HlyD; RND family efflux transporter MFP subunit 4256825..4257841 Desulfovibrio salexigens DSM 2638 8093631 YP_002993388.1 CDS Desal_3804 NC_012881.1 4257909 4261073 D PFAM: acriflavin resistance protein; KEGG: dde:Dde_1563 cation/multidrug efflux pump-like; acriflavin resistance protein 4257909..4261073 Desulfovibrio salexigens DSM 2638 8093632 YP_002993389.1 CDS Desal_3805 NC_012881.1 4261101 4261562 R PFAM: GCN5-related N-acetyltransferase; KEGG: vfm:VFMJ11_A1172 acetyltransferase; N-acetyltransferase GCN5 complement(4261101..4261562) Desulfovibrio salexigens DSM 2638 8093633 YP_002993390.1 CDS Desal_3806 NC_012881.1 4262057 4263382 D PFAM: amino acid permease-associated region; KEGG: dps:DP0919 proton-linked D-serine/D-alanine/glycine symporter; amino acid permease 4262057..4263382 Desulfovibrio salexigens DSM 2638 8093634 YP_002993391.1 CDS Desal_3807 NC_012881.1 4263616 4263909 D PFAM: Hpt domain protein; KEGG: hch:HCH_05739 signal transduction protein; Hpt protein 4263616..4263909 Desulfovibrio salexigens DSM 2638 8093635 YP_002993392.1 CDS Desal_3808 NC_012881.1 4264033 4266435 D KEGG: dvm:DvMF_2069 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase I 4264033..4266435 Desulfovibrio salexigens DSM 2638 8093636 YP_002993393.1 CDS era NC_012881.1 4266764 4267681 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 4266764..4267681 Desulfovibrio salexigens DSM 2638 8093637 YP_002993394.1 CDS Desal_3810 NC_012881.1 4267785 4268489 D PFAM: alanine racemase domain protein; KEGG: dvl:Dvul_2910 alanine racemase domain-containing protein; alanine racemase 4267785..4268489 Desulfovibrio salexigens DSM 2638 8093638 YP_002993395.1 CDS Desal_3811 NC_012881.1 4268517 4269278 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3589 chemotaxis protein MotA; MotA/TolQ/ExbB proton channel 4268517..4269278 Desulfovibrio salexigens DSM 2638 8093639 YP_002993396.1 CDS Desal_3812 NC_012881.1 4269315 4270145 D PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_3588 OmpA family protein; OmpA/MotB domain-containing protein 4269315..4270145 Desulfovibrio salexigens DSM 2638 8093640 YP_002993397.1 CDS Desal_3813 NC_012881.1 4270155 4270883 D PFAM: OmpA/MotB domain protein; KEGG: dde:Dde_3587 chemotaxis protein MotB; OmpA/MotB domain-containing protein 4270155..4270883 Desulfovibrio salexigens DSM 2638 8093641 YP_002993398.1 CDS Desal_3814 NC_012881.1 4270913 4271413 D PFAM: flagellar basal body-associated protein FliL; KEGG: dde:Dde_3586 flagellar protein FliL; flagellar basal body-associated protein FliL 4270913..4271413 Desulfovibrio salexigens DSM 2638 8093642 YP_002993399.1 CDS Desal_3815 NC_012881.1 4271510 4272199 D TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: dvm:DvMF_2213 flagellar motor switch protein FliN; flagellar motor switch protein FliN 4271510..4272199 Desulfovibrio salexigens DSM 2638 8093643 YP_002993400.1 CDS Desal_3816 NC_012881.1 4272192 4272557 D PFAM: flagellar biosynthesis protein FliO; KEGG: dds:Ddes_0376 flagellar biosynthesis protein FliO; flagellar biosynthesis protein FliO 4272192..4272557 Desulfovibrio salexigens DSM 2638 8093644 YP_002993401.1 CDS fliP NC_012881.1 4272523 4273281 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 4272523..4273281 Desulfovibrio salexigens DSM 2638 8093645 YP_002993402.1 CDS Desal_3818 NC_012881.1 4273324 4273593 D TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: dde:Dde_3582 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 4273324..4273593 Desulfovibrio salexigens DSM 2638 8093646 YP_002993403.1 CDS Desal_3819 NC_012881.1 4273692 4274447 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: dde:Dde_3581 RNA methyltransferase TrmH, group 3; TrmH family RNA methyltransferase complement(4273692..4274447) Desulfovibrio salexigens DSM 2638 8093647 YP_002993404.1 CDS Desal_3820 NC_012881.1 4274887 4276509 D PFAM: lytic transglycosylase catalytic; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: dde:Dde_3580 peptidoglycan-binding LysM; lytic transglycosylase 4274887..4276509 Desulfovibrio salexigens DSM 2638 8093648 YP_002993405.1 CDS Desal_3821 NC_012881.1 4276659 4278023 D PFAM: aldehyde Dehydrogenase; KEGG: pca:Pcar_1074 aldehyde dehydrogenase; aldehyde Dehydrogenase 4276659..4278023 Desulfovibrio salexigens DSM 2638 8093649 YP_002993406.1 CDS Desal_3822 NC_012881.1 4278132 4278950 R TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; KEGG: dvl:Dvul_2848 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(4278132..4278950) Desulfovibrio salexigens DSM 2638 8093650 YP_002993407.1 CDS Desal_3823 NC_012881.1 4279170 4279712 R PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dde:Dde_0046 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit; pyruvate ferredoxin/flavodoxin oxidoreductase complement(4279170..4279712) Desulfovibrio salexigens DSM 2638 8093651 YP_002993408.1 CDS Desal_3824 NC_012881.1 4279714 4280472 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dvm:DvMF_2056 thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate complement(4279714..4280472) Desulfovibrio salexigens DSM 2638 8093652 YP_002993409.1 CDS Desal_3825 NC_012881.1 4280475 4281542 R catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase complement(4280475..4281542) Desulfovibrio salexigens DSM 2638 8093653 YP_002993410.1 CDS Desal_3826 NC_012881.1 4281544 4281774 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_0043 2-oxoglutarate ferredoxin oxidoreductase, delta subunit; 4Fe-4S ferredoxin complement(4281544..4281774) Desulfovibrio salexigens DSM 2638 8093654 YP_002993411.1 CDS queA NC_012881.1 4281955 4283055 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(4281955..4283055) Desulfovibrio salexigens DSM 2638 8093655 YP_002993412.1 CDS Desal_3828 NC_012881.1 4283189 4283866 D KEGG: dat:HRM2_p00520 hypothetical protein; hypothetical protein 4283189..4283866 Desulfovibrio salexigens DSM 2638 8093656 YP_002993413.1 CDS Desal_3829 NC_012881.1 4284035 4284526 D KEGG: dat:HRM2_27640 lipoprotein; lipoprotein 4284035..4284526 Desulfovibrio salexigens DSM 2638 8093657 YP_002993414.1 CDS Desal_3830 NC_012881.1 4284526 4285737 D KEGG: dde:Dde_0039 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 4284526..4285737 Desulfovibrio salexigens DSM 2638 8093658 YP_002993415.1 CDS Desal_3831 NC_012881.1 4285713 4286519 D KEGG: dde:Dde_0038 hypothetical protein; hypothetical protein 4285713..4286519 Desulfovibrio salexigens DSM 2638 8091640 YP_002993416.1 CDS Desal_3832 NC_012881.1 4286644 4287954 D PFAM: protein of unknown function DUF107; KEGG: dde:Dde_0037 nodulation efficiency protein NfeD; hypothetical protein 4286644..4287954 Desulfovibrio salexigens DSM 2638 8092087 YP_002993417.1 CDS Desal_3833 NC_012881.1 4287981 4288763 D PFAM: band 7 protein; SMART: band 7 protein; KEGG: dvl:Dvul_0039 band 7 protein; hypothetical protein 4287981..4288763 Desulfovibrio salexigens DSM 2638 8092088 YP_002993418.1 CDS Desal_3834 NC_012881.1 4288766 4289773 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: gme:Gmet_2330 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4288766..4289773 Desulfovibrio salexigens DSM 2638 8092089 Desal_R0001 tRNA Desal_R0001 NC_012881.1 42969 43044 R tRNA-Lys complement(42969..43044) Desulfovibrio salexigens DSM 2638 8092180 Desal_R0002 tRNA Desal_R0002 NC_012881.1 43172 43247 R tRNA-Lys complement(43172..43247) Desulfovibrio salexigens DSM 2638 8092181 Desal_R0004 tRNA Desal_R0004 NC_012881.1 66696 66772 D tRNA-Ile 66696..66772 Desulfovibrio salexigens DSM 2638 8092207 Desal_R0005 tRNA Desal_R0005 NC_012881.1 66792 66867 D tRNA-Ala 66792..66867 Desulfovibrio salexigens DSM 2638 8092208 Desal_R0008 tRNA Desal_R0008 NC_012881.1 333612 333687 D tRNA-Thr 333612..333687 Desulfovibrio salexigens DSM 2638 8094090 Desal_R0009 tRNA Desal_R0009 NC_012881.1 789700 789776 R tRNA-Arg complement(789700..789776) Desulfovibrio salexigens DSM 2638 8094658 Desal_R0010 tRNA Desal_R0010 NC_012881.1 789973 790049 R tRNA-Arg complement(789973..790049) Desulfovibrio salexigens DSM 2638 8094659 Desal_R0011 tRNA Desal_R0011 NC_012881.1 913666 913752 R tRNA-Leu complement(913666..913752) Desulfovibrio salexigens DSM 2638 8091803 Desal_R0012 tRNA Desal_R0012 NC_012881.1 926857 926943 R tRNA-Leu complement(926857..926943) Desulfovibrio salexigens DSM 2638 8091812 Desal_R0013 tRNA Desal_R0013 NC_012881.1 927099 927185 R tRNA-Leu complement(927099..927185) Desulfovibrio salexigens DSM 2638 8091813 Desal_R0014 tRNA Desal_R0014 NC_012881.1 968482 968557 D tRNA-Ala 968482..968557 Desulfovibrio salexigens DSM 2638 8091854 Desal_R0015 tRNA Desal_R0015 NC_012881.1 991902 991977 D tRNA-Ala 991902..991977 Desulfovibrio salexigens DSM 2638 8092644 Desal_R0016 tRNA Desal_R0016 NC_012881.1 1151107 1151201 D tRNA-Ser 1151107..1151201 Desulfovibrio salexigens DSM 2638 8094374 Desal_R0017 tRNA Desal_R0017 NC_012881.1 1152212 1152303 D tRNA-Ser 1152212..1152303 Desulfovibrio salexigens DSM 2638 8094376 Desal_R0018 tRNA Desal_R0018 NC_012881.1 1232714 1232790 D tRNA-Trp 1232714..1232790 Desulfovibrio salexigens DSM 2638 8092036 Desal_R0019 tRNA Desal_R0019 NC_012881.1 1302593 1302668 D tRNA-Thr 1302593..1302668 Desulfovibrio salexigens DSM 2638 8092569 Desal_R0020 tRNA Desal_R0020 NC_012881.1 1302692 1302776 D tRNA-Tyr 1302692..1302776 Desulfovibrio salexigens DSM 2638 8092570 Desal_R0021 tRNA Desal_R0021 NC_012881.1 1302840 1302915 D tRNA-Gly 1302840..1302915 Desulfovibrio salexigens DSM 2638 8092571 Desal_R0022 tRNA Desal_R0022 NC_012881.1 1302962 1303037 D tRNA-Thr 1302962..1303037 Desulfovibrio salexigens DSM 2638 8092572 Desal_R0023 tRNA Desal_R0023 NC_012881.1 1304470 1304546 D tRNA-Trp 1304470..1304546 Desulfovibrio salexigens DSM 2638 8092575 Desal_R0024 tRNA Desal_R0024 NC_012881.1 1451648 1451723 D tRNA-Lys 1451648..1451723 Desulfovibrio salexigens DSM 2638 8091144 Desal_R0025 tRNA Desal_R0025 NC_012881.1 1487434 1487510 D tRNA-Arg 1487434..1487510 Desulfovibrio salexigens DSM 2638 8091178 Desal_R0026 tRNA Desal_R0026 NC_012881.1 1943819 1943902 D tRNA-Leu 1943819..1943902 Desulfovibrio salexigens DSM 2638 8092720 Desal_R0027 tRNA Desal_R0027 NC_012881.1 1968624 1968713 R tRNA-Sec complement(1968624..1968713) Desulfovibrio salexigens DSM 2638 8092739 Desal_R0029 tRNA Desal_R0029 NC_012881.1 2071345 2071421 R tRNA-Met complement(2071345..2071421) Desulfovibrio salexigens DSM 2638 8091440 Desal_R0030 tRNA Desal_R0030 NC_012881.1 2071591 2071667 R tRNA-Met complement(2071591..2071667) Desulfovibrio salexigens DSM 2638 8091441 Desal_R0031 tRNA Desal_R0031 NC_012881.1 2121324 2121410 D tRNA-Leu 2121324..2121410 Desulfovibrio salexigens DSM 2638 8092962 Desal_R0032 tRNA Desal_R0032 NC_012881.1 2121542 2121628 D tRNA-Leu 2121542..2121628 Desulfovibrio salexigens DSM 2638 8092963 Desal_R0033 tRNA Desal_R0033 NC_012881.1 2122331 2122417 D tRNA-Leu 2122331..2122417 Desulfovibrio salexigens DSM 2638 8092965 Desal_R0034 tRNA Desal_R0034 NC_012881.1 2123691 2123777 D tRNA-Leu 2123691..2123777 Desulfovibrio salexigens DSM 2638 8092968 Desal_R0035 tRNA Desal_R0035 NC_012881.1 2272519 2272595 D tRNA-Arg 2272519..2272595 Desulfovibrio salexigens DSM 2638 8093260 Desal_R0037 tRNA Desal_R0037 NC_012881.1 2315144 2315220 D tRNA-Pro 2315144..2315220 Desulfovibrio salexigens DSM 2638 8093292 Desal_R0038 tRNA Desal_R0038 NC_012881.1 2316429 2316518 R tRNA-Ser complement(2316429..2316518) Desulfovibrio salexigens DSM 2638 8093295 Desal_R0039 tRNA Desal_R0039 NC_012881.1 2316694 2316783 R tRNA-Ser complement(2316694..2316783) Desulfovibrio salexigens DSM 2638 8093296 Desal_R0040 tRNA Desal_R0040 NC_012881.1 2361925 2362014 R tRNA-Ser complement(2361925..2362014) Desulfovibrio salexigens DSM 2638 8094459 Desal_R0041 tRNA Desal_R0041 NC_012881.1 2393807 2393882 D tRNA-His 2393807..2393882 Desulfovibrio salexigens DSM 2638 8094484 Desal_R0042 tRNA Desal_R0042 NC_012881.1 2393927 2394002 D tRNA-His 2393927..2394002 Desulfovibrio salexigens DSM 2638 8094485 Desal_R0043 tRNA Desal_R0043 NC_012881.1 2403724 2403800 D tRNA-Arg 2403724..2403800 Desulfovibrio salexigens DSM 2638 8094494 Desal_R0046 tRNA Desal_R0046 NC_012881.1 2470325 2470400 R tRNA-Ala complement(2470325..2470400) Desulfovibrio salexigens DSM 2638 8092337 Desal_R0047 tRNA Desal_R0047 NC_012881.1 2470420 2470496 R tRNA-Ile complement(2470420..2470496) Desulfovibrio salexigens DSM 2638 8092338 Desal_R0049 tRNA Desal_R0049 NC_012881.1 2492084 2492176 D tRNA-Ser 2492084..2492176 Desulfovibrio salexigens DSM 2638 8092362 Desal_R0050 tRNA Desal_R0050 NC_012881.1 2765689 2765764 D tRNA-Asn 2765689..2765764 Desulfovibrio salexigens DSM 2638 8091599 Desal_R0051 tRNA Desal_R0051 NC_012881.1 2766100 2766175 D tRNA-Asn 2766100..2766175 Desulfovibrio salexigens DSM 2638 8091600 Desal_R0052 tRNA Desal_R0052 NC_012881.1 2767251 2767326 D tRNA-Asn 2767251..2767326 Desulfovibrio salexigens DSM 2638 8091602 Desal_R0053 tRNA Desal_R0053 NC_012881.1 2779581 2779657 R tRNA-Met complement(2779581..2779657) Desulfovibrio salexigens DSM 2638 8091613 Desal_R0054 tRNA Desal_R0054 NC_012881.1 2779846 2779922 R tRNA-Met complement(2779846..2779922) Desulfovibrio salexigens DSM 2638 8091614 Desal_R0055 tRNA Desal_R0055 NC_012881.1 2796283 2796359 R tRNA-Met complement(2796283..2796359) Desulfovibrio salexigens DSM 2638 8091631 Desal_R0056 tRNA Desal_R0056 NC_012881.1 2862105 2862179 R tRNA-Gly complement(2862105..2862179) Desulfovibrio salexigens DSM 2638 8091029 Desal_R0057 tRNA Desal_R0057 NC_012881.1 2862238 2862312 R tRNA-Gly complement(2862238..2862312) Desulfovibrio salexigens DSM 2638 8091030 Desal_R0058 tRNA Desal_R0058 NC_012881.1 2862316 2862390 R tRNA-Cys complement(2862316..2862390) Desulfovibrio salexigens DSM 2638 8091031 Desal_R0059 tRNA Desal_R0059 NC_012881.1 2862400 2862474 R tRNA-Gly complement(2862400..2862474) Desulfovibrio salexigens DSM 2638 8091032 Desal_R0060 tRNA Desal_R0060 NC_012881.1 2862536 2862610 R tRNA-Gly complement(2862536..2862610) Desulfovibrio salexigens DSM 2638 8091033 Desal_R0061 tRNA Desal_R0061 NC_012881.1 2862673 2862747 R tRNA-Gly complement(2862673..2862747) Desulfovibrio salexigens DSM 2638 8091034 Desal_R0062 tRNA Desal_R0062 NC_012881.1 2862751 2862825 R tRNA-Cys complement(2862751..2862825) Desulfovibrio salexigens DSM 2638 8091035 Desal_R0063 tRNA Desal_R0063 NC_012881.1 2862834 2862908 R tRNA-Gly complement(2862834..2862908) Desulfovibrio salexigens DSM 2638 8091036 Desal_R0064 tRNA Desal_R0064 NC_012881.1 2888037 2888124 D tRNA-Leu 2888037..2888124 Desulfovibrio salexigens DSM 2638 8093686 Desal_R0067 tRNA Desal_R0067 NC_012881.1 2963780 2963855 R tRNA-Ala complement(2963780..2963855) Desulfovibrio salexigens DSM 2638 8093853 Desal_R0068 tRNA Desal_R0068 NC_012881.1 2963875 2963951 R tRNA-Ile complement(2963875..2963951) Desulfovibrio salexigens DSM 2638 8093854 Desal_R0070 tRNA Desal_R0070 NC_012881.1 3003712 3003788 D tRNA-Pro 3003712..3003788 Desulfovibrio salexigens DSM 2638 8093886 Desal_R0071 tRNA Desal_R0071 NC_012881.1 3213046 3213120 D tRNA-Val 3213046..3213120 Desulfovibrio salexigens DSM 2638 8093410 Desal_R0072 tRNA Desal_R0072 NC_012881.1 3239995 3240070 D tRNA-Gln 3239995..3240070 Desulfovibrio salexigens DSM 2638 8090762 Desal_R0075 tRNA Desal_R0075 NC_012881.1 3376695 3376770 R tRNA-Ala complement(3376695..3376770) Desulfovibrio salexigens DSM 2638 8092228 Desal_R0076 tRNA Desal_R0076 NC_012881.1 3376790 3376866 R tRNA-Ile complement(3376790..3376866) Desulfovibrio salexigens DSM 2638 8092229 Desal_R0078 tRNA Desal_R0078 NC_012881.1 3428907 3428981 D tRNA-Gln 3428907..3428981 Desulfovibrio salexigens DSM 2638 8092128 Desal_R0079 tRNA Desal_R0079 NC_012881.1 3429003 3429080 D tRNA-Glu 3429003..3429080 Desulfovibrio salexigens DSM 2638 8092129 Desal_R0080 tRNA Desal_R0080 NC_012881.1 3429173 3429250 D tRNA-Glu 3429173..3429250 Desulfovibrio salexigens DSM 2638 8092130 Desal_R0081 tRNA Desal_R0081 NC_012881.1 3430406 3430480 D tRNA-Gln 3430406..3430480 Desulfovibrio salexigens DSM 2638 8092132 Desal_R0082 tRNA Desal_R0082 NC_012881.1 3430539 3430616 D tRNA-Glu 3430539..3430616 Desulfovibrio salexigens DSM 2638 8092133 Desal_R0083 tRNA Desal_R0083 NC_012881.1 3430712 3430789 D tRNA-Glu 3430712..3430789 Desulfovibrio salexigens DSM 2638 8092134 Desal_R0084 tRNA Desal_R0084 NC_012881.1 3430885 3430962 D tRNA-Glu 3430885..3430962 Desulfovibrio salexigens DSM 2638 8092135 Desal_R0085 tRNA Desal_R0085 NC_012881.1 3488854 3488930 D tRNA-Pro 3488854..3488930 Desulfovibrio salexigens DSM 2638 8091484 Desal_R0086 tRNA Desal_R0086 NC_012881.1 3528274 3528350 D tRNA-Pro 3528274..3528350 Desulfovibrio salexigens DSM 2638 8093976 Desal_R0087 tRNA Desal_R0087 NC_012881.1 3528514 3528589 D tRNA-Thr 3528514..3528589 Desulfovibrio salexigens DSM 2638 8093977 Desal_R0088 tRNA Desal_R0088 NC_012881.1 3528818 3528894 D tRNA-Pro 3528818..3528894 Desulfovibrio salexigens DSM 2638 8093978 Desal_R0089 tRNA Desal_R0089 NC_012881.1 3529057 3529132 D tRNA-Thr 3529057..3529132 Desulfovibrio salexigens DSM 2638 8093979 Desal_R0090 tRNA Desal_R0090 NC_012881.1 3614322 3614397 D tRNA-Val 3614322..3614397 Desulfovibrio salexigens DSM 2638 8093950 Desal_R0091 tRNA Desal_R0091 NC_012881.1 3614439 3614515 D tRNA-Asp 3614439..3614515 Desulfovibrio salexigens DSM 2638 8093951 Desal_R0092 tRNA Desal_R0092 NC_012881.1 3618628 3618704 D tRNA-Asp 3618628..3618704 Desulfovibrio salexigens DSM 2638 8093956 Desal_R0093 tRNA Desal_R0093 NC_012881.1 3624666 3624741 D tRNA-Val 3624666..3624741 Desulfovibrio salexigens DSM 2638 8093964 Desal_R0094 tRNA Desal_R0094 NC_012881.1 3624784 3624860 D tRNA-Asp 3624784..3624860 Desulfovibrio salexigens DSM 2638 8093965 Desal_R0095 tRNA Desal_R0095 NC_012881.1 3629395 3629470 D tRNA-Val 3629395..3629470 Desulfovibrio salexigens DSM 2638 8093968 Desal_R0096 tRNA Desal_R0096 NC_012881.1 3629513 3629589 D tRNA-Asp 3629513..3629589 Desulfovibrio salexigens DSM 2638 8093969 Desal_R0097 tRNA Desal_R0097 NC_012881.1 3702750 3702836 R tRNA-Leu complement(3702750..3702836) Desulfovibrio salexigens DSM 2638 8091717 Desal_R0100 tRNA Desal_R0100 NC_012881.1 3734032 3734107 R tRNA-Ala complement(3734032..3734107) Desulfovibrio salexigens DSM 2638 8091743 Desal_R0101 tRNA Desal_R0101 NC_012881.1 3734127 3734203 R tRNA-Ile complement(3734127..3734203) Desulfovibrio salexigens DSM 2638 8091744 Desal_R0104 tRNA Desal_R0104 NC_012881.1 3756225 3756300 R tRNA-Met complement(3756225..3756300) Desulfovibrio salexigens DSM 2638 8091764 Desal_R0106 tRNA Desal_R0106 NC_012881.1 4100472 4100556 D tRNA-Tyr 4100472..4100556 Desulfovibrio salexigens DSM 2638 8094600 Desal_R0107 tRNA Desal_R0107 NC_012881.1 4196943 4197018 D tRNA-Phe 4196943..4197018 Desulfovibrio salexigens DSM 2638 8093250 Desal_R0108 tRNA Desal_R0108 NC_012881.1 4199570 4199645 R tRNA-Phe complement(4199570..4199645) Desulfovibrio salexigens DSM 2638 8093580 Desal_R0003 rRNA Desal_R0003 NC_012881.1 65072 66614 D 16S ribosomal RNA 65072..66614 Desulfovibrio salexigens DSM 2638 8092206 Desal_R0006 rRNA Desal_R0006 NC_012881.1 67028 69961 D 23S ribosomal RNA 67028..69961 Desulfovibrio salexigens DSM 2638 8092209 Desal_R0007 rRNA Desal_R0007 NC_012881.1 70065 70177 D 5S ribosomal RNA 70065..70177 Desulfovibrio salexigens DSM 2638 8092210 Desal_R0044 rRNA Desal_R0044 NC_012881.1 2467014 2467126 R 5S ribosomal RNA complement(2467014..2467126) Desulfovibrio salexigens DSM 2638 8092335 Desal_R0045 rRNA Desal_R0045 NC_012881.1 2467230 2470164 R 23S ribosomal RNA complement(2467230..2470164) Desulfovibrio salexigens DSM 2638 8092336 Desal_R0048 rRNA Desal_R0048 NC_012881.1 2470578 2472120 R 16S ribosomal RNA complement(2470578..2472120) Desulfovibrio salexigens DSM 2638 8092339 Desal_R0065 rRNA Desal_R0065 NC_012881.1 2960470 2960582 R 5S ribosomal RNA complement(2960470..2960582) Desulfovibrio salexigens DSM 2638 8093749 Desal_R0066 rRNA Desal_R0066 NC_012881.1 2960686 2963619 R 23S ribosomal RNA complement(2960686..2963619) Desulfovibrio salexigens DSM 2638 8093850 Desal_R0069 rRNA Desal_R0069 NC_012881.1 2964033 2965575 R 16S ribosomal RNA complement(2964033..2965575) Desulfovibrio salexigens DSM 2638 8093855 Desal_R0073 rRNA Desal_R0073 NC_012881.1 3373385 3373497 R 5S ribosomal RNA complement(3373385..3373497) Desulfovibrio salexigens DSM 2638 8092226 Desal_R0074 rRNA Desal_R0074 NC_012881.1 3373601 3376534 R 23S ribosomal RNA complement(3373601..3376534) Desulfovibrio salexigens DSM 2638 8092227 Desal_R0077 rRNA Desal_R0077 NC_012881.1 3376948 3378490 R 16S ribosomal RNA complement(3376948..3378490) Desulfovibrio salexigens DSM 2638 8092230 Desal_R0098 rRNA Desal_R0098 NC_012881.1 3730722 3730834 R 5S ribosomal RNA complement(3730722..3730834) Desulfovibrio salexigens DSM 2638 8091741 Desal_R0099 rRNA Desal_R0099 NC_012881.1 3730938 3733871 R 23S ribosomal RNA complement(3730938..3733871) Desulfovibrio salexigens DSM 2638 8091742 Desal_R0102 rRNA Desal_R0102 NC_012881.1 3734285 3735827 R 16S ribosomal RNA complement(3734285..3735827) Desulfovibrio salexigens DSM 2638 8091745