-- dump date 20120504_143514 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001208941.1 146328959 5122489 130..1458 1 NC_009446.1 identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein 1458 dnaA 5122489 dnaA Dichelobacter nodosus VCS1703A chromosomal replication initiator protein YP_001208941.1 130 D 246195 CDS YP_001208942.1 146329375 5122555 1668..2912 1 NC_009446.1 identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta 2912 dnaN 5122555 dnaN Dichelobacter nodosus VCS1703A DNA polymerase III subunit beta YP_001208942.1 1668 D 246195 CDS YP_001208943.1 146329635 5122868 2978..4837 1 NC_009446.1 identified by match to protein family HMM PF01553; match to protein family HMM PF07690; acyltransferase domain-containing protein 4837 5122868 DNO_0003 Dichelobacter nodosus VCS1703A acyltransferase domain-containing protein YP_001208943.1 2978 D 246195 CDS YP_001208944.1 146329274 5122837 4830..5624 1 NC_009446.1 identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067; glutamate racemase 5624 5122837 DNO_0005 Dichelobacter nodosus VCS1703A glutamate racemase YP_001208944.1 4830 D 246195 CDS YP_001208945.1 146329819 5123242 complement(5534..7708) 1 NC_009446.1 identified by match to protein family HMM PF05976; match to protein family HMM TIGR01666; match to protein family HMM TIGR01667; membrane protein 7708 yccS 5123242 yccS Dichelobacter nodosus VCS1703A membrane protein YP_001208945.1 5534 R 246195 CDS YP_001208946.1 146329345 5122823 7738..7893 1 NC_009446.1 hypothetical protein 7893 5122823 DNO_0006 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208946.1 7738 D 246195 CDS YP_001208947.1 146328669 5123257 8034..9416 1 NC_009446.1 identified by match to protein family HMM PF00560; leucine rich repeat domain-containing protein 9416 5123257 DNO_0007 Dichelobacter nodosus VCS1703A leucine rich repeat domain-containing protein YP_001208947.1 8034 D 246195 CDS YP_001208948.1 146329407 5123387 complement(9542..11227) 1 NC_009446.1 identified by match to protein family HMM PF02080; match to protein family HMM PF06826; match to protein family HMM TIGR01625; hypothetical protein 11227 5123387 DNO_0009 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208948.1 9542 R 246195 CDS YP_001208949.1 146328854 5122230 complement(11257..11421) 1 NC_009446.1 hypothetical protein 11421 5122230 DNO_0010 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208949.1 11257 R 246195 CDS YP_001208950.1 146329561 5122580 11520..11966 1 NC_009446.1 identified by match to protein family HMM PF00582; universal stress family protein 11966 uspA 5122580 uspA Dichelobacter nodosus VCS1703A universal stress family protein YP_001208950.1 11520 D 246195 CDS YP_001208951.1 146329262 5122875 12181..13170 1 NC_009446.1 identified by match to protein family HMM PF00254; match to protein family HMM PF01346; FKBP-type peptidyl-prolyl cis-trans isomerase 13170 5122875 DNO_0012 Dichelobacter nodosus VCS1703A FKBP-type peptidyl-prolyl cis-trans isomerase YP_001208951.1 12181 D 246195 CDS YP_001208952.1 146328674 5122809 complement(13287..14720) 1 NC_009446.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase 14720 5122809 DNO_0013 Dichelobacter nodosus VCS1703A aminoacyl-histidine dipeptidase YP_001208952.1 13287 R 246195 CDS YP_001208953.1 146329042 5122852 15025..17202 1 NC_009446.1 identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711; ornithine decarboxylase 17202 5122852 DNO_0014 Dichelobacter nodosus VCS1703A ornithine decarboxylase YP_001208953.1 15025 D 246195 CDS YP_001208954.1 146328817 5122216 17276..18595 1 NC_009446.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter 18595 potE 5122216 potE Dichelobacter nodosus VCS1703A putrescine transporter YP_001208954.1 17276 D 246195 CDS YP_001208955.1 146329823 5122866 19061..20089 1 NC_009446.1 identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; O-sialoglycoprotein endopeptidase 20089 5122866 DNO_0018 Dichelobacter nodosus VCS1703A O-sialoglycoprotein endopeptidase YP_001208955.1 19061 D 246195 CDS YP_001208956.1 146329246 5122893 complement(20084..22228) 1 NC_009446.1 identified by match to protein family HMM PF01842; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase 22228 relA 5122893 relA Dichelobacter nodosus VCS1703A GTP pyrophosphokinase YP_001208956.1 20084 R 246195 CDS YP_001208957.1 146328875 5123409 complement(22225..24870) 1 NC_009446.1 identified by match to protein family HMM PF01433; match to protein family HMM TIGR02414; aminopeptidase N 24870 pepN 5123409 pepN Dichelobacter nodosus VCS1703A aminopeptidase N YP_001208957.1 22225 R 246195 CDS YP_001208958.1 146329878 5122197 complement(24911..27178) 1 NC_009446.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 27178 maeB 5122197 maeB Dichelobacter nodosus VCS1703A malic enzyme YP_001208958.1 24911 R 246195 CDS YP_001208959.1 146329366 5123177 27263..28267 1 NC_009446.1 identified by match to protein family HMM PF00933; beta-hexosaminidase 28267 5123177 DNO_0021 Dichelobacter nodosus VCS1703A beta-hexosaminidase YP_001208959.1 27263 D 246195 CDS YP_001208960.1 146328948 5122208 28257..28667 1 NC_009446.1 hypothetical protein 28667 5122208 DNO_0022 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208960.1 28257 D 246195 CDS YP_001208961.1 146329012 5122634 28670..29233 1 NC_009446.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 29233 5122634 DNO_0023 Dichelobacter nodosus VCS1703A hypoxanthine-guanine phosphoribosyltransferase YP_001208961.1 28670 D 246195 CDS YP_001208962.1 146329642 5122726 29205..29564 1 NC_009446.1 lipoprotein 29564 5122726 DNO_0024 Dichelobacter nodosus VCS1703A lipoprotein YP_001208962.1 29205 D 246195 CDS YP_001208963.1 146329774 5122532 29747..31198 1 NC_009446.1 identified by match to protein family HMM PF04575; hypothetical protein 31198 5122532 DNO_0025 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208963.1 29747 D 246195 CDS YP_001208964.1 146329296 5123329 complement(31252..32316) 1 NC_009446.1 identified by match to protein family HMM PF02547; match to protein family HMM TIGR00113; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 32316 queA 5123329 queA Dichelobacter nodosus VCS1703A S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_001208964.1 31252 R 246195 CDS YP_001208965.1 146329574 5122514 complement(32316..33209) 1 NC_009446.1 identified by match to protein family HMM PF01509; match to protein family HMM PF09157; match to protein family HMM TIGR00431; tRNA pseudouridine synthase B 33209 truB 5122514 truB Dichelobacter nodosus VCS1703A tRNA pseudouridine synthase B YP_001208965.1 32316 R 246195 CDS YP_001208966.1 146328987 5123163 complement(33212..33580) 1 NC_009446.1 identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A 33580 rbfA 5123163 rbfA Dichelobacter nodosus VCS1703A ribosome-binding factor A YP_001208966.1 33212 R 246195 CDS YP_001208967.1 146329713 5123408 complement(33580..36219) 1 NC_009446.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 36219 infB 5123408 infB Dichelobacter nodosus VCS1703A translation initiation factor IF-2 YP_001208967.1 33580 R 246195 CDS YP_001208968.1 146329748 5122139 complement(36240..37727) 1 NC_009446.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF08529; match to protein family HMM TIGR01953; match to protein family HMM TIGR01954; transcription termination factor 37727 nusA 5122139 nusA Dichelobacter nodosus VCS1703A transcription termination factor YP_001208968.1 36240 R 246195 CDS YP_001208969.1 146329510 5123355 complement(37746..38213) 1 NC_009446.1 identified by match to protein family HMM PF02576; hypothetical protein 38213 5123355 DNO_0031 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208969.1 37746 R 246195 CDS YP_001208970.1 146329480 5122892 38976..39716 1 NC_009446.1 identified by match to protein family HMM PF00497; extracellular solute-binding family protein 39716 5122892 DNO_0033 Dichelobacter nodosus VCS1703A extracellular solute-binding family protein YP_001208970.1 38976 D 246195 CDS YP_001208971.1 146328869 5122656 39902..40630 1 NC_009446.1 identified by match to protein family HMM PF00497; extracellular solute-binding family protein 40630 5122656 DNO_0034 Dichelobacter nodosus VCS1703A extracellular solute-binding family protein YP_001208971.1 39902 D 246195 CDS YP_001208972.1 146329558 5122476 40879..41550 1 NC_009446.1 identified by match to protein family HMM PF02698; hypothetical protein 41550 5122476 DNO_0035 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208972.1 40879 D 246195 CDS YP_001208973.1 146328953 5122916 41638..42453 1 NC_009446.1 identified by match to protein family HMM PF00877; NlpC/P60 domain-containing protein 42453 5122916 DNO_0036 Dichelobacter nodosus VCS1703A NlpC/P60 domain-containing protein YP_001208973.1 41638 D 246195 CDS YP_001208974.1 146329143 5122607 complement(42519..43373) 1 NC_009446.1 hypothetical protein 43373 5122607 DNO_0037 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208974.1 42519 R 246195 CDS YP_001208975.1 146329873 5122383 complement(43538..44458) 1 NC_009446.1 identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966; preprotein translocase, SecF subunit 44458 secF 5122383 secF Dichelobacter nodosus VCS1703A preprotein translocase, SecF subunit YP_001208975.1 43538 R 246195 CDS YP_001208976.1 146329406 5122873 complement(44469..46334) 1 NC_009446.1 identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129; preprotein translocase, SecD subunit 46334 secD 5122873 secD Dichelobacter nodosus VCS1703A preprotein translocase, SecD subunit YP_001208976.1 44469 R 246195 CDS YP_001208977.1 146328728 5122377 complement(46402..46806) 1 NC_009446.1 identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC 46806 5122377 DNO_0040 Dichelobacter nodosus VCS1703A preprotein translocase subunit YajC YP_001208977.1 46402 R 246195 CDS YP_001208978.1 146329464 5122186 complement(46987..47895) 1 NC_009446.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific recombinase XerC 47895 xerC 5122186 xerC Dichelobacter nodosus VCS1703A site-specific recombinase XerC YP_001208978.1 46987 R 246195 CDS YP_001208979.1 146328927 5122251 complement(47892..48728) 1 NC_009446.1 identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652; diaminopimelate epimerase 48728 dapF 5122251 dapF Dichelobacter nodosus VCS1703A diaminopimelate epimerase YP_001208979.1 47892 R 246195 CDS YP_001208980.1 146329554 5122718 complement(48736..49614) 1 NC_009446.1 hypothetical protein 49614 5122718 DNO_0043 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208980.1 48736 R 246195 CDS YP_001208981.1 146328806 5122591 49667..49807 1 NC_009446.1 hypothetical protein 49807 5122591 DNO_0044 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208981.1 49667 D 246195 CDS YP_001208982.1 146329035 5123438 49807..50418 1 NC_009446.1 identified by match to protein family HMM PF01205; hypothetical protein 50418 5123438 DNO_0045 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208982.1 49807 D 246195 CDS YP_001208983.1 146329334 5122719 50444..51277 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter family protein 51277 5122719 DNO_0046 Dichelobacter nodosus VCS1703A ABC transporter family protein YP_001208983.1 50444 D 246195 CDS YP_001208984.1 146329167 5122951 51261..52004 1 NC_009446.1 hypothetical protein 52004 5122951 DNO_0047 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208984.1 51261 D 246195 CDS YP_001208985.1 146329631 5122160 51998..52999 1 NC_009446.1 SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 52999 5122160 DNO_0048 Dichelobacter nodosus VCS1703A putative periplasmic protease YP_001208985.1 51998 D 246195 CDS YP_001208986.1 146329700 5123380 53027..54466 1 NC_009446.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase 54466 5123380 DNO_0049 Dichelobacter nodosus VCS1703A aminoacyl-histidine dipeptidase YP_001208986.1 53027 D 246195 CDS YP_001208987.1 146329564 5123215 complement(54566..55519) 1 NC_009446.1 hypothetical protein 55519 5123215 DNO_0050 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208987.1 54566 R 246195 CDS YP_001208988.1 146329060 5123243 complement(55529..56176) 1 NC_009446.1 identified by match to protein family HMM PF03458; hypothetical protein 56176 5123243 DNO_0051 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208988.1 55529 R 246195 CDS YP_001208989.1 146328805 5123137 complement(56237..56977) 1 NC_009446.1 hypothetical protein 56977 5123137 DNO_0052 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208989.1 56237 R 246195 CDS YP_001208990.1 146329379 5123439 57206..59764 1 NC_009446.1 identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein 59764 5123439 DNO_0053 Dichelobacter nodosus VCS1703A mechanosensitive ion channel family protein YP_001208990.1 57206 D 246195 CDS YP_001208991.1 146328929 5122252 complement(60224..60388) 1 NC_009446.1 hypothetical protein 60388 5122252 DNO_0057 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208991.1 60224 R 246195 CDS YP_001208992.1 146329689 5123303 60962..61198 1 NC_009446.1 identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; 50S ribosomal protein L28 61198 rpmB 5123303 rpmB Dichelobacter nodosus VCS1703A 50S ribosomal protein L28 YP_001208992.1 60962 D 246195 CDS YP_001208993.1 146329897 5122857 61210..61380 1 NC_009446.1 identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; 50S ribosomal protein L33 61380 rpmG 5122857 rpmG Dichelobacter nodosus VCS1703A 50S ribosomal protein L33 YP_001208993.1 61210 D 246195 CDS YP_001208994.1 146328921 5122250 complement(61430..62644) 1 NC_009446.1 identified by match to protein family HMM PF07690; hypothetical protein 62644 5122250 DNO_0062 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208994.1 61430 R 246195 CDS YP_001208995.1 146329537 5122736 complement(62648..63217) 1 NC_009446.1 identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447; peptidyl-tRNA hydrolase 63217 pth 5122736 pth Dichelobacter nodosus VCS1703A peptidyl-tRNA hydrolase YP_001208995.1 62648 R 246195 CDS YP_001208996.1 146328681 5122602 complement(63223..63900) 1 NC_009446.1 identified by match to protein family HMM PF01386; match to protein family HMM TIGR00731; 50S ribosomal protein L25 63900 rplY 5122602 rplY Dichelobacter nodosus VCS1703A 50S ribosomal protein L25 YP_001208996.1 63223 R 246195 CDS YP_001208997.1 146329368 5122414 complement(63977..64915) 1 NC_009446.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 64915 prsA 5122414 prsA Dichelobacter nodosus VCS1703A ribose-phosphate pyrophosphokinase YP_001208997.1 63977 R 246195 CDS YP_001208998.1 146329838 5123313 complement(65162..65749) 1 NC_009446.1 identified by match to protein family HMM PF03550; lipoprotein 65749 5123313 DNO_0067 Dichelobacter nodosus VCS1703A lipoprotein YP_001208998.1 65162 R 246195 CDS YP_001208999.1 146329833 5123234 complement(65736..67439) 1 NC_009446.1 identified by match to protein family HMM PF07719; hypothetical protein 67439 5123234 DNO_0068 Dichelobacter nodosus VCS1703A hypothetical protein YP_001208999.1 65736 R 246195 CDS YP_001209000.1 146329251 5122941 67528..68784 1 NC_009446.1 identified by match to protein family HMM PF00745; match to protein family HMM PF01488; match to protein family HMM PF05201; match to protein family HMM TIGR01035; glutamyl-tRNA reductase 68784 hemA 5122941 hemA Dichelobacter nodosus VCS1703A glutamyl-tRNA reductase YP_001209000.1 67528 D 246195 CDS YP_001209001.1 146329153 5123402 68801..68944 1 NC_009446.1 hypothetical protein 68944 5123402 DNO_0070 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209001.1 68801 D 246195 CDS YP_001209002.1 146329088 5123143 68941..70038 1 NC_009446.1 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 70038 prfA 5123143 prfA Dichelobacter nodosus VCS1703A peptide chain release factor 1 YP_001209002.1 68941 D 246195 CDS YP_001209003.1 146328946 5122479 70035..70865 1 NC_009446.1 identified by match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR00536; match to protein family HMM TIGR03387; HemK family modification methylase 70865 5122479 DNO_0072 Dichelobacter nodosus VCS1703A HemK family modification methylase YP_001209003.1 70035 D 246195 CDS YP_001209004.1 146329305 5122641 complement(70873..71850) 1 NC_009446.1 identified by match to protein family HMM PF01244; dipeptidase family protein 71850 5122641 DNO_0073 Dichelobacter nodosus VCS1703A dipeptidase family protein YP_001209004.1 70873 R 246195 CDS YP_001209005.1 146329413 5123288 71992..72786 1 NC_009446.1 enoyl-(acyl carrier protein) reductase 72786 5123288 DNO_0074 Dichelobacter nodosus VCS1703A enoyl-(acyl carrier protein) reductase YP_001209005.1 71992 D 246195 CDS YP_001209006.1 146329858 5122483 complement(72832..73629) 1 NC_009446.1 identified by match to protein family HMM PF01925; hypothetical protein 73629 5122483 DNO_0075 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209006.1 72832 R 246195 CDS YP_001209007.1 146328800 5123106 complement(73660..76473) 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 76473 uvrA 5123106 uvrA Dichelobacter nodosus VCS1703A excinuclease ABC subunit A YP_001209007.1 73660 R 246195 CDS YP_001209008.1 146329227 5123446 complement(76480..77010) 1 NC_009446.1 identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 77010 purE 5123446 purE Dichelobacter nodosus VCS1703A phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001209008.1 76480 R 246195 CDS YP_001209009.1 146329815 5122370 complement(77014..78141) 1 NC_009446.1 identified by match to protein family HMM PF02222; match to protein family HMM TIGR01161; phosphoribosylaminoimidazole carboxylase ATPase subunit 78141 purK 5122370 purK Dichelobacter nodosus VCS1703A phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001209009.1 77014 R 246195 CDS YP_001209010.1 146328811 5122818 78273..78614 1 NC_009446.1 identified by match to protein family HMM PF04287; hypothetical protein 78614 5122818 DNO_0080 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209010.1 78273 D 246195 CDS YP_001209011.1 146329325 5123431 complement(78611..79489) 1 NC_009446.1 identified by match to protein family HMM PF00892; hypothetical protein 79489 5123431 DNO_0079 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209011.1 78611 R 246195 CDS YP_001209012.1 146328667 5123054 79671..80348 1 NC_009446.1 identified by match to protein family HMM PF00691; match to protein family HMM PF05433; OmpA family protein 80348 5123054 DNO_0081 Dichelobacter nodosus VCS1703A OmpA family protein YP_001209012.1 79671 D 246195 CDS YP_001209013.1 146329723 5122501 80485..81444 1 NC_009446.1 identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin kinase RibF 81444 ribF 5122501 ribF Dichelobacter nodosus VCS1703A riboflavin kinase RibF YP_001209013.1 80485 D 246195 CDS YP_001209014.1 146329527 5123129 81455..84229 1 NC_009446.1 identified by match to protein family HMM PF00133; match to protein family HMM PF06827; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392; isoleucyl-tRNA synthetase 84229 ileS 5123129 ileS Dichelobacter nodosus VCS1703A isoleucyl-tRNA synthetase YP_001209014.1 81455 D 246195 CDS YP_001209015.1 146329202 5122540 84229..84693 1 NC_009446.1 identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077; signal peptidase II 84693 lspA 5122540 lspA Dichelobacter nodosus VCS1703A signal peptidase II YP_001209015.1 84229 D 246195 CDS YP_001209016.1 146329771 5122302 complement(84994..85218) 1 NC_009446.1 hypothetical protein 85218 5122302 DNO_0085 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209016.1 84994 R 246195 CDS YP_001209017.1 146329357 5123332 complement(85225..85836) 1 NC_009446.1 identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase 85836 5123332 DNO_0086 Dichelobacter nodosus VCS1703A glutathione S-transferase YP_001209017.1 85225 R 246195 CDS YP_001209018.1 146329030 5122295 86117..87493 1 NC_009446.1 identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; oxygen-independent coproporphyrinogen III oxidase 87493 hemN-1 5122295 hemN-1 Dichelobacter nodosus VCS1703A oxygen-independent coproporphyrinogen III oxidase YP_001209018.1 86117 D 246195 CDS YP_001209019.1 146329901 5122757 87536..89053 1 NC_009446.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 89053 purF 5122757 purF Dichelobacter nodosus VCS1703A amidophosphoribosyltransferase YP_001209019.1 87536 D 246195 CDS YP_001209020.1 146329187 5123130 89046..89753 1 NC_009446.1 identified by match to protein family HMM PF04445; hypothetical protein 89753 5123130 DNO_0089 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209020.1 89046 D 246195 CDS YP_001209021.1 146328751 5122320 89764..90435 1 NC_009446.1 identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine pyrophosphokinase family protein 90435 5122320 DNO_0090 Dichelobacter nodosus VCS1703A thiamine pyrophosphokinase family protein YP_001209021.1 89764 D 246195 CDS YP_001209022.1 146329346 5123287 90518..91072 1 NC_009446.1 identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase 91072 5123287 DNO_0091 Dichelobacter nodosus VCS1703A NADPH-dependent FMN reductase YP_001209022.1 90518 D 246195 CDS YP_001209023.1 146328658 5122182 91192..92196 1 NC_009446.1 identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase 92196 gap 5122182 gap Dichelobacter nodosus VCS1703A glyceraldehyde-3-phosphate dehydrogenase YP_001209023.1 91192 D 246195 CDS YP_001209024.1 146328856 5122999 complement(95444..97183) 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter family protein 97183 5122999 DNO_0094 Dichelobacter nodosus VCS1703A ABC transporter family protein YP_001209024.1 95444 R 246195 CDS YP_001209025.1 146329580 5122575 97230..98666 1 NC_009446.1 identified by match to protein family HMM PF00294; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02198; match to protein family HMM TIGR02199; ADP-heptose synthase 98666 rfaE 5122575 rfaE Dichelobacter nodosus VCS1703A ADP-heptose synthase YP_001209025.1 97230 D 246195 CDS YP_001209026.1 146328672 5122957 98698..99840 1 NC_009446.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase superfamily protein 99840 5122957 DNO_0096 Dichelobacter nodosus VCS1703A FAD dependent oxidoreductase superfamily protein YP_001209026.1 98698 D 246195 CDS YP_001209027.1 146329820 5122312 complement(99841..101034) 1 NC_009446.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 101034 5122312 DNO_0097 Dichelobacter nodosus VCS1703A glycosyl transferase family protein YP_001209027.1 99841 R 246195 CDS YP_001209028.1 146329040 5123099 complement(101172..101309) 1 NC_009446.1 hypothetical protein 101309 5123099 DNO_0098 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209028.1 101172 R 246195 CDS YP_001209029.1 146329493 5122240 complement(101322..102473) 1 NC_009446.1 identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome bd ubiquinol oxidase subunit II 102473 cydB 5122240 cydB Dichelobacter nodosus VCS1703A cytochrome bd ubiquinol oxidase subunit II YP_001209029.1 101322 R 246195 CDS YP_001209030.1 146328926 5122678 complement(102476..104029) 1 NC_009446.1 identified by match to protein family HMM PF01654; cytochrome bd ubiquinol oxidase, subunit I 104029 cydA 5122678 cydA Dichelobacter nodosus VCS1703A cytochrome bd ubiquinol oxidase, subunit I YP_001209030.1 102476 R 246195 CDS YP_001209031.1 146329160 5122714 complement(104060..105691) 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868; ABC-type transporter involved in cytochrome bd biosynthesis 105691 cydC 5122714 cydC Dichelobacter nodosus VCS1703A ABC-type transporter involved in cytochrome bd biosynthesis YP_001209031.1 104060 R 246195 CDS YP_001209032.1 146329835 5123088 complement(105666..107354) 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857; ABC-type transporter involved in cytochrome bd biosynthesis 107354 cydD 5123088 cydD Dichelobacter nodosus VCS1703A ABC-type transporter involved in cytochrome bd biosynthesis YP_001209032.1 105666 R 246195 CDS YP_001209033.1 146329282 5122885 complement(107357..107653) 1 NC_009446.1 hypothetical protein 107653 5122885 DNO_0103 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209033.1 107357 R 246195 CDS YP_001209034.1 146329373 5123221 complement(107739..109289) 1 NC_009446.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; sulfate transporter family protein 109289 5123221 DNO_0104 Dichelobacter nodosus VCS1703A sulfate transporter family protein YP_001209034.1 107739 R 246195 CDS YP_001209035.1 146329669 5122399 complement(109557..110990) 1 NC_009446.1 identified by match to protein family HMM PF00245; alkaline phosphatase 110990 5122399 DNO_0105 Dichelobacter nodosus VCS1703A alkaline phosphatase YP_001209035.1 109557 R 246195 CDS YP_001209036.1 146329640 5123249 complement(111182..112483) 1 NC_009446.1 identified by match to protein family HMM PF06354; hypothetical protein 112483 5123249 DNO_0106 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209036.1 111182 R 246195 CDS YP_001209037.1 146328652 5122504 complement(112497..113771) 1 NC_009446.1 hypothetical protein 113771 5122504 DNO_0107 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209037.1 112497 R 246195 CDS YP_001209038.1 146329388 5123216 114084..116657 1 NC_009446.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; ATP-dependent protease ClpB 116657 clpB 5123216 clpB Dichelobacter nodosus VCS1703A ATP-dependent protease ClpB YP_001209038.1 114084 D 246195 CDS YP_001209039.1 146329412 5123119 complement(116736..117509) 1 NC_009446.1 fimbrial protein FimB 117509 fimB 5123119 fimB Dichelobacter nodosus VCS1703A fimbrial protein FimB YP_001209039.1 116736 R 246195 CDS YP_001209040.1 146328769 5122473 complement(117650..118138) 1 NC_009446.1 identified by match to protein family HMM PF00114; match to protein family HMM PF07963; match to protein family HMM TIGR02532; fimbrial subunit FimA 118138 fimA 5122473 fimA Dichelobacter nodosus VCS1703A fimbrial subunit FimA YP_001209040.1 117650 R 246195 CDS YP_001209041.1 146328798 5122762 118352..119680 1 NC_009446.1 identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 119680 aroA 5122762 aroA Dichelobacter nodosus VCS1703A 3-phosphoshikimate 1-carboxyvinyltransferase YP_001209041.1 118352 D 246195 CDS YP_001209042.1 146329682 5123448 119658..120332 1 NC_009446.1 identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017; cytidylate kinase 120332 cmk 5123448 cmk Dichelobacter nodosus VCS1703A cytidylate kinase YP_001209042.1 119658 D 246195 CDS YP_001209043.1 146329586 5123160 120353..122029 1 NC_009446.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00717; 30S ribosomal protein S1 122029 rpsA 5123160 rpsA Dichelobacter nodosus VCS1703A 30S ribosomal protein S1 YP_001209043.1 120353 D 246195 CDS YP_001209044.1 146328836 5122974 122092..122382 1 NC_009446.1 identified by match to protein family HMM PF00216; match to protein family HMM TIGR00988; integration host factor subunit beta 122382 ihfB 5122974 ihfB Dichelobacter nodosus VCS1703A integration host factor subunit beta YP_001209044.1 122092 D 246195 CDS YP_001209045.1 146328965 5123473 122461..123057 1 NC_009446.1 identified by match to protein family HMM PF00565; nuclease family protein 123057 5123473 DNO_0115 Dichelobacter nodosus VCS1703A nuclease family protein YP_001209045.1 122461 D 246195 CDS YP_001209046.1 146329312 5122739 123145..124437 1 NC_009446.1 identified by match to protein family HMM PF01743; match to protein family HMM TIGR01942; poly(A) polymerase PcnB 124437 pcnB 5122739 pcnB Dichelobacter nodosus VCS1703A poly(A) polymerase PcnB YP_001209046.1 123145 D 246195 CDS YP_001209047.1 146329024 5122863 124434..124928 1 NC_009446.1 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 124928 5122863 DNO_0117 Dichelobacter nodosus VCS1703A 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_001209047.1 124434 D 246195 CDS YP_001209048.1 146329696 5122698 complement(124935..126671) 1 NC_009446.1 identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 126671 ptsI 5122698 ptsI Dichelobacter nodosus VCS1703A phosphoenolpyruvate-protein phosphotransferase YP_001209048.1 124935 R 246195 CDS YP_001209049.1 146328964 5122342 complement(126671..126931) 1 NC_009446.1 identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; PTS phosphocarrier protein HPr 126931 5122342 DNO_0119 Dichelobacter nodosus VCS1703A PTS phosphocarrier protein HPr YP_001209049.1 126671 R 246195 CDS YP_001209050.1 146329831 5122767 127079..127861 1 NC_009446.1 identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 127861 5122767 DNO_0120 Dichelobacter nodosus VCS1703A HAD family hydrolase YP_001209050.1 127079 D 246195 CDS YP_001209051.1 146328743 5122350 127815..128240 1 NC_009446.1 hypothetical protein 128240 5122350 DNO_0121 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209051.1 127815 D 246195 CDS YP_001209052.1 146329874 5123131 complement(128249..128410) 1 NC_009446.1 hypothetical protein 128410 5123131 DNO_0122 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209052.1 128249 R 246195 CDS YP_001209053.1 146329763 5123082 complement(128596..129090) 1 NC_009446.1 solute binding family protein 129090 5123082 DNO_0123 Dichelobacter nodosus VCS1703A solute binding family protein YP_001209053.1 128596 R 246195 CDS YP_001209054.1 146329633 5123340 complement(129134..129259) 1 NC_009446.1 hypothetical protein 129259 5123340 DNO_0124 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209054.1 129134 R 246195 CDS YP_001209055.1 146328687 5122481 129189..130178 1 NC_009446.1 identified by match to protein family HMM PF00561; alpha-beta fold family protein 130178 5122481 DNO_0125 Dichelobacter nodosus VCS1703A alpha-beta fold family protein YP_001209055.1 129189 D 246195 CDS YP_001209056.1 146329809 5123384 130243..130752 1 NC_009446.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 130752 ssb-1 5123384 ssb-1 Dichelobacter nodosus VCS1703A single-strand binding protein YP_001209056.1 130243 D 246195 CDS YP_001209057.1 146329311 5122565 complement(130841..131875) 1 NC_009446.1 identified by match to protein family HMM TIGR02122; hypothetical protein 131875 5122565 DNO_0127 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209057.1 130841 R 246195 CDS YP_001209058.1 146328753 5123199 complement(131888..132634) 1 NC_009446.1 identified by match to protein family HMM PF06104; lipoprotein 132634 5123199 DNO_0128 Dichelobacter nodosus VCS1703A lipoprotein YP_001209058.1 131888 R 246195 CDS YP_001209059.1 146329392 5122969 complement(132631..134013) 1 NC_009446.1 identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase 134013 dacB 5122969 dacB Dichelobacter nodosus VCS1703A D-alanyl-D-alanine carboxypeptidase YP_001209059.1 132631 R 246195 CDS YP_001209060.1 146329416 5122282 134168..134725 1 NC_009446.1 hypothetical protein 134725 5122282 DNO_0130 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209060.1 134168 D 246195 CDS YP_001209061.1 146328678 5122396 134725..135873 1 NC_009446.1 identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; oxygen-independent coproporphyrinogen III oxidase HemN 135873 hemN-2 5122396 hemN-2 Dichelobacter nodosus VCS1703A oxygen-independent coproporphyrinogen III oxidase HemN YP_001209061.1 134725 D 246195 CDS YP_001209062.1 146329123 5122955 136074..137594 1 NC_009446.1 identified by match to protein family HMM PF02554; carbon starvation protein A 137594 5122955 DNO_0132 Dichelobacter nodosus VCS1703A carbon starvation protein A YP_001209062.1 136074 D 246195 CDS YP_001209063.1 146329737 5122612 137810..138712 1 NC_009446.1 identified by match to protein family HMM PF00892; hypothetical protein 138712 5122612 DNO_0133 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209063.1 137810 D 246195 CDS YP_001209064.1 146328963 5123366 139015..139317 1 NC_009446.1 hypothetical protein 139317 5123366 DNO_0134 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209064.1 139015 D 246195 CDS YP_001209065.1 146328994 5122795 139333..140130 1 NC_009446.1 hypothetical protein 140130 5122795 DNO_0135 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209065.1 139333 D 246195 CDS YP_001209066.1 146329620 5122798 140175..140423 1 NC_009446.1 identified by match to protein family HMM PF04023; iron transport protein FeoA 140423 feoA 5122798 feoA Dichelobacter nodosus VCS1703A iron transport protein FeoA YP_001209066.1 140175 D 246195 CDS YP_001209067.1 146329115 5123374 140420..142918 1 NC_009446.1 identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; ferrous iron transport protein FeoB 142918 feoB 5123374 feoB Dichelobacter nodosus VCS1703A ferrous iron transport protein FeoB YP_001209067.1 140420 D 246195 CDS YP_001209068.1 146329821 5122649 143287..144177 1 NC_009446.1 response regulator receiver domain-containing protein 144177 5122649 DNO_0138 Dichelobacter nodosus VCS1703A response regulator receiver domain-containing protein YP_001209068.1 143287 D 246195 CDS YP_001209069.1 146328749 5122943 144170..145198 1 NC_009446.1 identified by match to protein family HMM PF00293; match to protein family HMM PF01467; match to protein family HMM TIGR00125; NUDIX domain-containing protein 145198 5122943 DNO_0139 Dichelobacter nodosus VCS1703A NUDIX domain-containing protein YP_001209069.1 144170 D 246195 CDS YP_001209070.1 146329348 5123203 complement(145251..146792) 1 NC_009446.1 hypothetical protein 146792 5123203 DNO_0140 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209070.1 145251 R 246195 CDS YP_001209071.1 146328918 5122817 complement(147068..148411) 1 NC_009446.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 148411 5122817 DNO_0141 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209071.1 147068 R 246195 CDS YP_001209072.1 146329102 5122748 complement(148561..149466) 1 NC_009446.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; OxrR-like transcriptional regulator 149466 5122748 DNO_0142 Dichelobacter nodosus VCS1703A OxrR-like transcriptional regulator YP_001209072.1 148561 R 246195 CDS YP_001209073.1 146329403 5122425 149616..150179 1 NC_009446.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; match to protein family HMM TIGR03137; alkyl hydroperoxide reductase C22 subunit 150179 ahpC 5122425 ahpC Dichelobacter nodosus VCS1703A alkyl hydroperoxide reductase C22 subunit YP_001209073.1 149616 D 246195 CDS YP_001209074.1 146329450 5122516 150253..151812 1 NC_009446.1 identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; match to protein family HMM TIGR03140; alkyl hydroperoxide reductase 151812 5122516 DNO_0144 Dichelobacter nodosus VCS1703A alkyl hydroperoxide reductase YP_001209074.1 150253 D 246195 CDS YP_001209075.1 146329056 5123389 complement(151877..152302) 1 NC_009446.1 hypothetical protein 152302 5123389 DNO_0145 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209075.1 151877 R 246195 CDS YP_001209076.1 146329176 5123231 complement(152314..152844) 1 NC_009446.1 identified by match to protein family HMM PF03029; match to protein family HMM TIGR00231; hypothetical protein 152844 5123231 DNO_0146 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209076.1 152314 R 246195 CDS YP_001209077.1 146329891 5122961 complement(152863..153849) 1 NC_009446.1 hypothetical protein 153849 5122961 DNO_0147 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209077.1 152863 R 246195 CDS YP_001209078.1 146328714 5122212 complement(153901..154257) 1 NC_009446.1 hypothetical protein 154257 5122212 DNO_0148 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209078.1 153901 R 246195 CDS YP_001209079.1 146328774 5123036 154464..154877 1 NC_009446.1 identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 154877 5123036 DNO_0149 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209079.1 154464 D 246195 CDS YP_001209080.1 146329497 5123300 complement(154881..155489) 1 NC_009446.1 hypothetical protein 155489 5123300 DNO_0150 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209080.1 154881 R 246195 CDS YP_001209081.1 146328933 5122782 complement(155543..155986) 1 NC_009446.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 155986 5122782 DNO_0151 Dichelobacter nodosus VCS1703A MarR family transcriptional regulator YP_001209081.1 155543 R 246195 CDS YP_001209082.1 146329654 5122687 complement(156001..158409) 1 NC_009446.1 identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase I 158409 topA 5122687 topA Dichelobacter nodosus VCS1703A DNA topoisomerase I YP_001209082.1 156001 R 246195 CDS YP_001209083.1 146329613 5123394 complement(158479..158958) 1 NC_009446.1 hypothetical protein 158958 5123394 DNO_0153 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209083.1 158479 R 246195 CDS YP_001209084.1 146329048 5122336 complement(158963..160111) 1 NC_009446.1 identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA processing protein DprA 160111 dprA 5122336 dprA Dichelobacter nodosus VCS1703A DNA processing protein DprA YP_001209084.1 158963 R 246195 CDS YP_001209085.1 146329768 5122205 complement(160111..161163) 1 NC_009446.1 identified by match to protein family HMM PF01476; LysM domain-containing protein 161163 5122205 DNO_0155 Dichelobacter nodosus VCS1703A LysM domain-containing protein YP_001209085.1 160111 R 246195 CDS YP_001209086.1 146329347 5123335 161619..162164 1 NC_009446.1 identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; formylmethionine deformylase 162164 def 5123335 def Dichelobacter nodosus VCS1703A formylmethionine deformylase YP_001209086.1 161619 D 246195 CDS YP_001209087.1 146328824 5123310 162161..163105 1 NC_009446.1 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 163105 fmt 5123310 fmt Dichelobacter nodosus VCS1703A methionyl-tRNA formyltransferase YP_001209087.1 162161 D 246195 CDS YP_001209088.1 146329596 5123415 163157..164413 1 NC_009446.1 identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; rRNA SAM-dependent methyltransferase, Fmu 164413 rsmB 5123415 rsmB Dichelobacter nodosus VCS1703A rRNA SAM-dependent methyltransferase, Fmu YP_001209088.1 163157 D 246195 CDS YP_001209089.1 146328740 5123041 164417..165037 1 NC_009446.1 hypothetical protein 165037 5123041 DNO_0159 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209089.1 164417 D 246195 CDS YP_001209090.1 146329783 5122356 165067..167172 1 NC_009446.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229; histidine kinase, NtrY 167172 ntrY 5122356 ntrY Dichelobacter nodosus VCS1703A histidine kinase, NtrY YP_001209090.1 165067 D 246195 CDS YP_001209091.1 146328823 5122442 167233..168591 1 NC_009446.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; response regulator, NtrX 168591 ntrX 5122442 ntrX Dichelobacter nodosus VCS1703A response regulator, NtrX YP_001209091.1 167233 D 246195 CDS YP_001209092.1 146329050 5123416 168676..169308 1 NC_009446.1 identified by match to protein family HMM PF00313; match to protein family HMM PF06961; cold-shock DNA-binding domain-containing protein 169308 5123416 DNO_0162 Dichelobacter nodosus VCS1703A cold-shock DNA-binding domain-containing protein YP_001209092.1 168676 D 246195 CDS YP_001209093.1 146328735 5123102 169325..170902 1 NC_009446.1 identified by match to protein family HMM PF00342; glucose-6-phosphate isomerase 170902 pgi 5123102 pgi Dichelobacter nodosus VCS1703A glucose-6-phosphate isomerase YP_001209093.1 169325 D 246195 CDS YP_001209094.1 146329291 5122169 complement(171193..173331) 1 NC_009446.1 identified by match to protein family HMM PF00580; DNA helicase II 173331 uvrD-1 5122169 uvrD-1 Dichelobacter nodosus VCS1703A DNA helicase II YP_001209094.1 171193 R 246195 CDS YP_001209095.1 146329148 5122317 complement(173633..174712) 1 NC_009446.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 174712 fba 5122317 fba Dichelobacter nodosus VCS1703A fructose-bisphosphate aldolase YP_001209095.1 173633 R 246195 CDS YP_001209096.1 146329326 5122199 174951..176246 1 NC_009446.1 identified by match to protein family HMM TIGR02564; hypothetical protein 176246 csy1 5122199 csy1 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209096.1 174951 D 246195 CDS YP_001209097.1 146328755 5123097 176243..177193 1 NC_009446.1 identified by match to protein family HMM TIGR02565; hypothetical protein 177193 csy2 5123097 csy2 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209097.1 176243 D 246195 CDS YP_001209098.1 146329808 5122977 177209..178219 1 NC_009446.1 identified by match to protein family HMM TIGR02566; hypothetical protein 178219 csy3 5122977 csy3 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209098.1 177209 D 246195 CDS YP_001209099.1 146328647 5123309 178247..178855 1 NC_009446.1 identified by match to protein family HMM TIGR02563; hypothetical protein 178855 csy4 5123309 csy4 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209099.1 178247 D 246195 CDS YP_001209100.1 146329675 5122281 179553..179840 1 NC_009446.1 hypothetical protein 179840 5122281 DNO_0171 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209100.1 179553 D 246195 CDS YP_001209101.1 146329180 5123396 179837..181435 1 NC_009446.1 hypothetical protein 181435 5123396 DNO_0172 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209101.1 179837 D 246195 CDS YP_001209102.1 146329710 5122408 complement(181552..184944) 1 NC_009446.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 184944 vrlS 5122408 vrlS Dichelobacter nodosus VCS1703A DEAD/DEAH box helicase YP_001209102.1 181552 R 246195 CDS YP_001209103.1 146328971 5123184 complement(184934..185782) 1 NC_009446.1 hypothetical protein 185782 vrlR 5123184 vrlR Dichelobacter nodosus VCS1703A hypothetical protein YP_001209103.1 184934 R 246195 CDS YP_001209104.1 146328877 5123328 complement(185801..186556) 1 NC_009446.1 hypothetical protein 186556 vrlQ 5123328 vrlQ Dichelobacter nodosus VCS1703A hypothetical protein YP_001209104.1 185801 R 246195 CDS YP_001209105.1 146329856 5122372 complement(186556..188556) 1 NC_009446.1 identified by match to protein family HMM PF08665; hypothetical protein 188556 vrlP 5122372 vrlP Dichelobacter nodosus VCS1703A hypothetical protein YP_001209105.1 186556 R 246195 CDS YP_001209106.1 146329165 5123141 complement(188553..191450) 1 NC_009446.1 identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851; DEAD/DEAH box helicase 191450 vrlO 5123141 vrlO Dichelobacter nodosus VCS1703A DEAD/DEAH box helicase YP_001209106.1 188553 R 246195 CDS YP_001209107.1 146328733 5122314 complement(191454..191552) 1 NC_009446.1 hypothetical protein 191552 vrlN 5122314 vrlN Dichelobacter nodosus VCS1703A hypothetical protein YP_001209107.1 191454 R 246195 CDS YP_001209108.1 146328764 5122983 complement(191549..193036) 1 NC_009446.1 hypothetical protein 193036 vrlM 5122983 vrlM Dichelobacter nodosus VCS1703A hypothetical protein YP_001209108.1 191549 R 246195 CDS YP_001209109.1 146329329 5122344 complement(193039..195828) 1 NC_009446.1 S-adenosyl-L-methionine-dependent methyltransferases family protein VrlL 195828 vrlL 5122344 vrlL Dichelobacter nodosus VCS1703A S-adenosyl-L-methionine-dependent methyltransferases family protein VrlL YP_001209109.1 193039 R 246195 CDS YP_001209110.1 146329396 5123072 complement(195920..199651) 1 NC_009446.1 hypothetical protein 199651 vrlK 5123072 vrlK Dichelobacter nodosus VCS1703A hypothetical protein YP_001209110.1 195920 R 246195 CDS YP_001209111.1 146328698 5122515 complement(199648..200163) 1 NC_009446.1 hypothetical protein 200163 vrlJ 5122515 vrlJ Dichelobacter nodosus VCS1703A hypothetical protein YP_001209111.1 199648 R 246195 CDS YP_001209112.1 146329195 5123104 complement(200173..200376) 1 NC_009446.1 identified by match to protein family HMM TIGR01764; hypothetical protein 200376 vrlI 5123104 vrlI Dichelobacter nodosus VCS1703A hypothetical protein YP_001209112.1 200173 R 246195 CDS YP_001209113.1 146329209 5122187 complement(200503..201060) 1 NC_009446.1 hypothetical protein 201060 vrlH 5122187 vrlH Dichelobacter nodosus VCS1703A hypothetical protein YP_001209113.1 200503 R 246195 CDS YP_001209114.1 146328955 5122971 complement(201057..201854) 1 NC_009446.1 identified by match to protein family HMM PF00310; glutamine amidotransferase domain-containing protein VrlG 201854 vrlG 5122971 vrlG Dichelobacter nodosus VCS1703A glutamine amidotransferase domain-containing protein VrlG YP_001209114.1 201057 R 246195 CDS YP_001209115.1 146329827 5122603 complement(201839..202360) 1 NC_009446.1 hypothetical protein 202360 vrlF 5122603 vrlF Dichelobacter nodosus VCS1703A hypothetical protein YP_001209115.1 201839 R 246195 CDS YP_001209116.1 146329023 5122349 complement(202372..203328) 1 NC_009446.1 hypothetical protein 203328 vrlE 5122349 vrlE Dichelobacter nodosus VCS1703A hypothetical protein YP_001209116.1 202372 R 246195 CDS YP_001209117.1 146329559 5122709 complement(203575..203832) 1 NC_009446.1 hypothetical protein 203832 vrlD 5122709 vrlD Dichelobacter nodosus VCS1703A hypothetical protein YP_001209117.1 203575 R 246195 CDS YP_001209118.1 146329075 5122901 complement(203845..206472) 1 NC_009446.1 identified by match to protein family HMM PF02012; hypothetical protein 206472 vrlC 5122901 vrlC Dichelobacter nodosus VCS1703A hypothetical protein YP_001209118.1 203845 R 246195 CDS YP_001209119.1 146329034 5122606 206945..207217 1 NC_009446.1 hypothetical protein 207217 5122606 DNO_0191 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209119.1 206945 D 246195 CDS YP_001209120.1 146329193 5122796 207550..207969 1 NC_009446.1 hypothetical protein 207969 5122796 DNO_0192 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209120.1 207550 D 246195 CDS YP_001209121.1 146329369 5122209 complement(208788..209279) 1 NC_009446.1 identified by match to protein family HMM PF05433; lipoprotein 209279 5122209 DNO_0194 Dichelobacter nodosus VCS1703A lipoprotein YP_001209121.1 208788 R 246195 CDS YP_001209122.1 146329528 5123206 complement(209318..210079) 1 NC_009446.1 identified by match to protein family HMM PF01987; hypothetical protein 210079 5123206 DNO_0195 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209122.1 209318 R 246195 CDS YP_001209123.1 146328841 5122498 210254..211702 1 NC_009446.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 211702 pncB 5122498 pncB Dichelobacter nodosus VCS1703A nicotinate phosphoribosyltransferase YP_001209123.1 210254 D 246195 CDS YP_001209124.1 146329098 5122573 211699..212445 1 NC_009446.1 identified by match to protein family HMM PF02540; match to protein family HMM PF06508; match to protein family HMM TIGR00552; NAD+ synthetase 212445 nadE 5122573 nadE Dichelobacter nodosus VCS1703A NAD+ synthetase YP_001209124.1 211699 D 246195 CDS YP_001209125.1 146329055 5122722 212534..213067 1 NC_009446.1 identified by match to protein family HMM PF00719; inorganic pyrophosphatase 213067 ppa 5122722 ppa Dichelobacter nodosus VCS1703A inorganic pyrophosphatase YP_001209125.1 212534 D 246195 CDS YP_001209126.1 146329683 5122409 213737..215290 1 NC_009446.1 identified by match to protein family HMM PF03806; AbgT transporter family protein 215290 5122409 DNO_0200 Dichelobacter nodosus VCS1703A AbgT transporter family protein YP_001209126.1 213737 D 246195 CDS YP_001209127.1 146329551 5123079 215302..216522 1 NC_009446.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 216522 pepT-1 5123079 pepT-1 Dichelobacter nodosus VCS1703A peptidase T YP_001209127.1 215302 D 246195 CDS YP_001209128.1 146329283 5122598 complement(216912..217982) 1 NC_009446.1 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611; DNA replication and repair protein RecF 217982 recF 5122598 recF Dichelobacter nodosus VCS1703A DNA replication and repair protein RecF YP_001209128.1 216912 R 246195 CDS YP_001209129.1 146329759 5123214 complement(217988..219475) 1 NC_009446.1 identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg chelatase family protein 219475 5123214 DNO_0203 Dichelobacter nodosus VCS1703A Mg chelatase family protein YP_001209129.1 217988 R 246195 CDS YP_001209130.1 146328880 5123344 complement(219475..220269) 1 NC_009446.1 identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; alanine racemase domain-containing protein 220269 5123344 DNO_0204 Dichelobacter nodosus VCS1703A alanine racemase domain-containing protein YP_001209130.1 219475 R 246195 CDS YP_001209131.1 146329458 5123297 complement(220292..220807) 1 NC_009446.1 identified by match to protein family HMM PF04186; inner membrane protein FxsA 220807 5123297 DNO_0205 Dichelobacter nodosus VCS1703A inner membrane protein FxsA YP_001209131.1 220292 R 246195 CDS YP_001209132.1 146329645 5122749 complement(220833..223538) 1 NC_009446.1 identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF01612; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA polymerase I 223538 polA 5122749 polA Dichelobacter nodosus VCS1703A DNA polymerase I YP_001209132.1 220833 R 246195 CDS YP_001209133.1 146329865 5123299 223664..224251 1 NC_009446.1 identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase 224251 purN 5123299 purN Dichelobacter nodosus VCS1703A phosphoribosylglycinamide formyltransferase YP_001209133.1 223664 D 246195 CDS YP_001209134.1 146328731 5123166 complement(224262..225632) 1 NC_009446.1 identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; cysteinyl-tRNA synthetase 225632 cysS 5123166 cysS Dichelobacter nodosus VCS1703A cysteinyl-tRNA synthetase YP_001209134.1 224262 R 246195 CDS YP_001209135.1 146329457 5122871 225848..226348 1 NC_009446.1 identified by match to protein family HMM PF00160; peptidylprolyl cis-trans isomerase, cyclophilin- type 226348 5122871 DNO_0209 Dichelobacter nodosus VCS1703A peptidylprolyl cis-trans isomerase, cyclophilin- type YP_001209135.1 225848 D 246195 CDS YP_001209136.1 146328637 5122845 226367..226861 1 NC_009446.1 identified by match to protein family HMM PF00160; peptidylprolyl cis-trans isomerase, cyclophilin- type 226861 5122845 DNO_0210 Dichelobacter nodosus VCS1703A peptidylprolyl cis-trans isomerase, cyclophilin- type YP_001209136.1 226367 D 246195 CDS YP_001209137.1 146329080 5123182 226861..227571 1 NC_009446.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR01854; UDP-2,3-diacylglucosamine hydrolase 227571 lpxH 5123182 lpxH Dichelobacter nodosus VCS1703A UDP-2,3-diacylglucosamine hydrolase YP_001209137.1 226861 D 246195 CDS YP_001209138.1 146328717 5122201 227716..229275 1 NC_009446.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase family protein 229275 5122201 DNO_0212 Dichelobacter nodosus VCS1703A FAD dependent oxidoreductase family protein YP_001209138.1 227716 D 246195 CDS YP_001209139.1 146329122 5122935 229309..230802 1 NC_009446.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase 230802 glpK 5122935 glpK Dichelobacter nodosus VCS1703A glycerol kinase YP_001209139.1 229309 D 246195 CDS YP_001209140.1 146328684 5122609 230807..231541 1 NC_009446.1 identified by match to protein family HMM PF00230; major intrinsic protein superfamily glycerol facilitator protein 231541 glpF 5122609 glpF Dichelobacter nodosus VCS1703A major intrinsic protein superfamily glycerol facilitator protein YP_001209140.1 230807 D 246195 CDS YP_001209141.1 146329166 5122424 complement(232252..232674) 1 NC_009446.1 hypothetical protein 232674 5122424 DNO_0215 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209141.1 232252 R 246195 CDS YP_001209142.1 146329753 5122271 complement(232684..233109) 1 NC_009446.1 hypothetical protein 233109 5122271 DNO_0216 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209142.1 232684 R 246195 CDS YP_001209143.1 146329471 5122176 complement(234277..235224) 1 NC_009446.1 identified by match to protein family HMM PF04373; hypothetical protein 235224 5122176 DNO_0218 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209143.1 234277 R 246195 CDS YP_001209144.1 146328807 5122611 complement(235226..235933) 1 NC_009446.1 identified by match to protein family HMM PF01863; hypothetical protein 235933 5122611 DNO_0219 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209144.1 235226 R 246195 CDS YP_001209145.1 146329854 5123437 complement(235942..239040) 1 NC_009446.1 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I site-specific deoxyribonuclease 239040 hsdR 5123437 hsdR Dichelobacter nodosus VCS1703A type I site-specific deoxyribonuclease YP_001209145.1 235942 R 246195 CDS YP_001209146.1 146328770 5122164 complement(239033..239476) 1 NC_009446.1 hypothetical protein 239476 5122164 DNO_0221 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209146.1 239033 R 246195 CDS YP_001209147.1 146329709 5122907 complement(239473..240711) 1 NC_009446.1 identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein 240711 hsdS 5122907 hsdS Dichelobacter nodosus VCS1703A type I restriction modification DNA specificity domain-containing protein YP_001209147.1 239473 R 246195 CDS YP_001209148.1 146329144 5122357 complement(240702..243182) 1 NC_009446.1 identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497; type I restriction-modification system, M subunit 243182 hsdM 5122357 hsdM Dichelobacter nodosus VCS1703A type I restriction-modification system, M subunit YP_001209148.1 240702 R 246195 CDS YP_001209149.1 146328932 5122300 243544..244281 1 NC_009446.1 hypothetical protein 244281 5122300 DNO_0224 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209149.1 243544 D 246195 CDS YP_001209150.1 146329009 5122696 244292..245086 1 NC_009446.1 identified by match to protein family HMM PF01553; acyltransferase family protein 245086 5122696 DNO_0225 Dichelobacter nodosus VCS1703A acyltransferase family protein YP_001209150.1 244292 D 246195 CDS YP_001209151.1 146329216 5122774 complement(245143..245457) 1 NC_009446.1 identified by match to protein family HMM PF00216; DNA-binding protein HU 245457 5122774 DNO_0226 Dichelobacter nodosus VCS1703A DNA-binding protein HU YP_001209151.1 245143 R 246195 CDS YP_001209152.1 146329872 5123218 complement(245649..248066) 1 NC_009446.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La 248066 lon 5123218 lon Dichelobacter nodosus VCS1703A ATP-dependent protease La YP_001209152.1 245649 R 246195 CDS YP_001209153.1 146328686 5123095 complement(248080..249357) 1 NC_009446.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 249357 clpX 5123095 clpX Dichelobacter nodosus VCS1703A ATP-dependent protease ATP-binding subunit ClpX YP_001209153.1 248080 R 246195 CDS YP_001209154.1 146329429 5122437 complement(249374..249985) 1 NC_009446.1 identified by match to protein family HMM PF00574; match to protein family HMM TIGR00493; ATP-dependent Clp protease, proteolytic subunit ClpP 249985 clpP 5122437 clpP Dichelobacter nodosus VCS1703A ATP-dependent Clp protease, proteolytic subunit ClpP YP_001209154.1 249374 R 246195 CDS YP_001209155.1 146329491 5123186 complement(250227..251546) 1 NC_009446.1 identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor 251546 tig 5123186 tig Dichelobacter nodosus VCS1703A trigger factor YP_001209155.1 250227 R 246195 CDS YP_001209156.1 146329740 5122210 complement(251703..251933) 1 NC_009446.1 hypothetical protein 251933 5122210 DNO_0232 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209156.1 251703 R 246195 CDS YP_001209157.1 146329011 5122167 252373..254256 1 NC_009446.1 hypothetical protein 254256 5122167 DNO_0234 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209157.1 252373 D 246195 CDS YP_001209158.1 146329811 5122763 254189..255637 1 NC_009446.1 identified by match to protein family HMM PF00353; calcium-binding domain-containing protein 255637 5122763 DNO_0235 Dichelobacter nodosus VCS1703A calcium-binding domain-containing protein YP_001209158.1 254189 D 246195 CDS YP_001209159.1 146328729 5122958 complement(255700..256701) 1 NC_009446.1 identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; tryptophanyl-tRNA synthetase 256701 trpS 5122958 trpS Dichelobacter nodosus VCS1703A tryptophanyl-tRNA synthetase YP_001209159.1 255700 R 246195 CDS YP_001209160.1 146329578 5123202 complement(256698..257324) 1 NC_009446.1 identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; SUA5/yciO/yrdC domain-containing protein 257324 5123202 DNO_0237 Dichelobacter nodosus VCS1703A SUA5/yciO/yrdC domain-containing protein YP_001209160.1 256698 R 246195 CDS YP_001209161.1 146329617 5122931 complement(257389..259443) 1 NC_009446.1 identified by match to protein family HMM PF00563; hypothetical protein 259443 5122931 DNO_0238 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209161.1 257389 R 246195 CDS YP_001209162.1 146329074 5122402 259664..260677 1 NC_009446.1 identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase 260677 5122402 DNO_0239 Dichelobacter nodosus VCS1703A 2-nitropropane dioxygenase YP_001209162.1 259664 D 246195 CDS YP_001209163.1 146329071 5122288 260681..262537 1 NC_009446.1 identified by match to protein family HMM PF01266; match to protein family HMM PF05430; match to protein family HMM TIGR03197; hypothetical protein 262537 5122288 DNO_0240 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209163.1 260681 D 246195 CDS YP_001209164.1 146329760 5123116 262546..263100 1 NC_009446.1 hypothetical protein 263100 5123116 DNO_0241 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209164.1 262546 D 246195 CDS YP_001209165.1 146329214 5123343 complement(263150..265180) 1 NC_009446.1 identified by match to protein family HMM PF01432; M3 family oligopeptidase 265180 5123343 DNO_0242 Dichelobacter nodosus VCS1703A M3 family oligopeptidase YP_001209165.1 263150 R 246195 CDS YP_001209166.1 146329015 5123069 complement(265258..265686) 1 NC_009446.1 identified by match to protein family HMM PF04970; hypothetical protein 265686 5123069 DNO_0243 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209166.1 265258 R 246195 CDS YP_001209167.1 146329581 5122720 complement(265710..266729) 1 NC_009446.1 identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III subunit delta 266729 holA 5122720 holA Dichelobacter nodosus VCS1703A DNA polymerase III subunit delta YP_001209167.1 265710 R 246195 CDS YP_001209168.1 146329840 5122906 complement(266726..267220) 1 NC_009446.1 lipoprotein 267220 5122906 DNO_0245 Dichelobacter nodosus VCS1703A lipoprotein YP_001209168.1 266726 R 246195 CDS YP_001209169.1 146328949 5122373 complement(267217..269820) 1 NC_009446.1 identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; leucyl-tRNA synthetase 269820 leuS 5122373 leuS Dichelobacter nodosus VCS1703A leucyl-tRNA synthetase YP_001209169.1 267217 R 246195 CDS YP_001209170.1 146329365 5122621 complement(269789..271354) 1 NC_009446.1 identified by match to protein family HMM PF00795; match to protein family HMM TIGR00546; apolipoprotein N-acyltransferase 271354 lnt 5122621 lnt Dichelobacter nodosus VCS1703A apolipoprotein N-acyltransferase YP_001209170.1 269789 R 246195 CDS YP_001209171.1 146329131 5122503 complement(271510..272541) 1 NC_009446.1 identified by match to protein family HMM TIGR02122; lipoprotein 272541 5122503 DNO_0248 Dichelobacter nodosus VCS1703A lipoprotein YP_001209171.1 271510 R 246195 CDS YP_001209172.1 146328671 5122616 complement(272600..273376) 1 NC_009446.1 identified by match to protein family HMM PF00149; hypothetical protein 273376 5122616 DNO_0249 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209172.1 272600 R 246195 CDS YP_001209173.1 146329264 5122717 complement(274269..277541) 1 NC_009446.1 exodeoxyribonuclease V subunit gamma 277541 recC 5122717 recC Dichelobacter nodosus VCS1703A exodeoxyribonuclease V subunit gamma YP_001209173.1 274269 R 246195 CDS YP_001209174.1 146329444 5122380 complement(277560..278681) 1 NC_009446.1 identified by match to protein family HMM PF01757; hypothetical protein 278681 5122380 DNO_0252 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209174.1 277560 R 246195 CDS YP_001209175.1 146329884 5122915 278771..279637 1 NC_009446.1 hypothetical protein 279637 5122915 DNO_0253 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209175.1 278771 D 246195 CDS YP_001209176.1 146329781 5122265 279647..280969 1 NC_009446.1 identified by match to protein family HMM TIGR01353; deoxyguanosinetriphosphate triphosphohydrolase 280969 dgt 5122265 dgt Dichelobacter nodosus VCS1703A deoxyguanosinetriphosphate triphosphohydrolase YP_001209176.1 279647 D 246195 CDS YP_001209177.1 146328934 5122440 complement(281032..281961) 1 NC_009446.1 identified by match to protein family HMM PF09084; hypothetical protein 281961 5122440 DNO_0255 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209177.1 281032 R 246195 CDS YP_001209178.1 146328799 5122689 complement(281977..282711) 1 NC_009446.1 identified by match to protein family HMM PF00528; ABC transporter 282711 5122689 DNO_0256 Dichelobacter nodosus VCS1703A ABC transporter YP_001209178.1 281977 R 246195 CDS YP_001209179.1 146329526 5123447 complement(282708..283427) 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02463; ABC transporter 283427 5123447 DNO_0257 Dichelobacter nodosus VCS1703A ABC transporter YP_001209179.1 282708 R 246195 CDS YP_001209180.1 146329676 5122525 complement(283630..284730) 1 NC_009446.1 hypothetical protein 284730 gepC 5122525 gepC Dichelobacter nodosus VCS1703A hypothetical protein YP_001209180.1 283630 R 246195 CDS YP_001209181.1 146328982 5123397 285019..285615 1 NC_009446.1 hypothetical protein 285615 gepB 5123397 gepB Dichelobacter nodosus VCS1703A hypothetical protein YP_001209181.1 285019 D 246195 CDS YP_001209182.1 146329725 5122536 285713..286183 1 NC_009446.1 hypothetical protein 286183 gepA 5122536 gepA Dichelobacter nodosus VCS1703A hypothetical protein YP_001209182.1 285713 D 246195 CDS YP_001209183.1 146329146 5123127 286380..286565 1 NC_009446.1 hypothetical protein 286565 5123127 DNO_0261 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209183.1 286380 D 246195 CDS YP_001209184.1 146329796 5123238 complement(286641..286751) 1 NC_009446.1 hypothetical protein 286751 5123238 DNO_0262 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209184.1 286641 R 246195 CDS YP_001209185.1 146328782 5122460 complement(286748..287446) 1 NC_009446.1 identified by match to protein family HMM PF00717; match to protein family HMM PF01381; regulatory protein RegA1 287446 regA1 5122460 regA1 Dichelobacter nodosus VCS1703A regulatory protein RegA1 YP_001209185.1 286748 R 246195 CDS YP_001209186.1 146329750 5122894 complement(289759..290040) 1 NC_009446.1 identified by match to protein family HMM PF04605; virulence-associated protein VapD2 290040 vapD2 5122894 vapD2 Dichelobacter nodosus VCS1703A virulence-associated protein VapD2 YP_001209186.1 289759 R 246195 CDS YP_001209187.1 146328978 5123353 complement(290906..292216) 1 NC_009446.1 identified by match to protein family HMM PF05272; virulence-associated protein VapE2 292216 vapE2 5123353 vapE2 Dichelobacter nodosus VCS1703A virulence-associated protein VapE2 YP_001209187.1 290906 R 246195 CDS YP_001209188.1 146329179 5122548 complement(292206..292553) 1 NC_009446.1 virulence-associated protein VapF 292553 vapF 5122548 vapF Dichelobacter nodosus VCS1703A virulence-associated protein VapF YP_001209188.1 292206 R 246195 CDS YP_001209189.1 146328840 5123301 292386..292517 1 NC_009446.1 hypothetical protein 292517 5123301 DNO_0268 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209189.1 292386 D 246195 CDS YP_001209190.1 146329272 5123319 complement(292557..292778) 1 NC_009446.1 virulence-associated protein VapG2 292778 vapG2 5123319 vapG2 Dichelobacter nodosus VCS1703A virulence-associated protein VapG2 YP_001209190.1 292557 R 246195 CDS YP_001209191.1 146329900 5123251 293128..293475 1 NC_009446.1 identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein VapA2 293475 vapA2 5123251 vapA2 Dichelobacter nodosus VCS1703A virulence-associated protein VapA2 YP_001209191.1 293128 D 246195 CDS YP_001209192.1 146329724 5122335 complement(293468..293728) 1 NC_009446.1 hypothetical protein 293728 5122335 DNO_0270 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209192.1 293468 R 246195 CDS YP_001209193.1 146329565 5123024 complement(293791..294117) 1 NC_009446.1 identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein VapI 294117 vapI 5123024 vapI Dichelobacter nodosus VCS1703A virulence-associated protein VapI YP_001209193.1 293791 R 246195 CDS YP_001209194.1 146329869 5122428 complement(294127..294402) 1 NC_009446.1 identified by match to protein family HMM PF05015; plasmid maintenance system killer family protein 294402 5122428 DNO_0273 Dichelobacter nodosus VCS1703A plasmid maintenance system killer family protein YP_001209194.1 294127 R 246195 CDS YP_001209195.1 146329430 5122904 295301..295660 1 NC_009446.1 identified by match to protein family HMM PF05015; plasmid maintenance system killer family protein ToxA1 295660 toxA1 5122904 toxA1 Dichelobacter nodosus VCS1703A plasmid maintenance system killer family protein ToxA1 YP_001209195.1 295301 D 246195 CDS YP_001209196.1 146328876 5122248 295673..295981 1 NC_009446.1 identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein VapA1 295981 vapA1 5122248 vapA1 Dichelobacter nodosus VCS1703A virulence-associated protein VapA1 YP_001209196.1 295673 D 246195 CDS YP_001209197.1 146329610 5123307 296317..296547 1 NC_009446.1 identified by match to protein family HMM PF04014; virulence-associated protein VapB1 296547 vapB1 5123307 vapB1 Dichelobacter nodosus VCS1703A virulence-associated protein VapB1 YP_001209197.1 296317 D 246195 CDS YP_001209198.1 146329029 5122142 296544..296951 1 NC_009446.1 identified by match to protein family HMM PF01850; virulence-associated protein VapC1 296951 vapC1 5122142 vapC1 Dichelobacter nodosus VCS1703A virulence-associated protein VapC1 YP_001209198.1 296544 D 246195 CDS YP_001209199.1 146329022 5122794 complement(297073..297354) 1 NC_009446.1 identified by match to protein family HMM PF04605; virulence-associated protein VapD1 297354 vapD1 5122794 vapD1 Dichelobacter nodosus VCS1703A virulence-associated protein VapD1 YP_001209199.1 297073 R 246195 CDS YP_001209200.1 146328907 5122713 complement(297992..299305) 1 NC_009446.1 identified by match to protein family HMM PF05272; virulence-associated protein VapE1 299305 vapE1 5122713 vapE1 Dichelobacter nodosus VCS1703A virulence-associated protein VapE1 YP_001209200.1 297992 R 246195 CDS YP_001209201.1 146328715 5122784 complement(299401..299607) 1 NC_009446.1 virulence-associated protein VapG1 299607 vapG1 5122784 vapG1 Dichelobacter nodosus VCS1703A virulence-associated protein VapG1 YP_001209201.1 299401 R 246195 CDS YP_001209202.1 146329739 5123112 complement(299586..299891) 1 NC_009446.1 virulence-associated protein VapH 299891 vapH 5123112 vapH Dichelobacter nodosus VCS1703A virulence-associated protein VapH YP_001209202.1 299586 R 246195 CDS YP_001209203.1 146329482 5123364 complement(299986..301191) 1 NC_009446.1 identified by match to protein family HMM PF00589; integrase A1 301191 intA1 5123364 intA1 Dichelobacter nodosus VCS1703A integrase A1 YP_001209203.1 299986 R 246195 CDS YP_001209204.1 146328881 5122128 complement(301542..301736) 1 NC_009446.1 identified by match to protein family HMM PF02599; match to protein family HMM TIGR00202; carbon storage regulator 301736 glpA 5122128 glpA Dichelobacter nodosus VCS1703A carbon storage regulator YP_001209204.1 301542 R 246195 CDS YP_001209205.1 146329519 5122134 complement(301850..303091) 1 NC_009446.1 identified by match to protein family HMM PF00696; match to protein family HMM TIGR00657; aspartate kinase family protein 303091 5122134 DNO_0285 Dichelobacter nodosus VCS1703A aspartate kinase family protein YP_001209205.1 301850 R 246195 CDS YP_001209206.1 146328813 5122544 complement(303096..305717) 1 NC_009446.1 identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanyl-tRNA synthetase 305717 alaS 5122544 alaS Dichelobacter nodosus VCS1703A alanyl-tRNA synthetase YP_001209206.1 303096 R 246195 CDS YP_001209207.1 146328701 5123429 complement(305817..306290) 1 NC_009446.1 identified by match to protein family HMM PF02631; regulatory protein 306290 recX 5123429 recX Dichelobacter nodosus VCS1703A regulatory protein YP_001209207.1 305817 R 246195 CDS YP_001209208.1 146328886 5122569 complement(306280..307332) 1 NC_009446.1 identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; DNA recombination protein RecA 307332 recA 5122569 recA Dichelobacter nodosus VCS1703A DNA recombination protein RecA YP_001209208.1 306280 R 246195 CDS YP_001209209.1 146329579 5123469 complement(307392..307955) 1 NC_009446.1 hypothetical protein 307955 5123469 DNO_0289 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209209.1 307392 R 246195 CDS YP_001209210.1 146329898 5122880 complement(308126..308689) 1 NC_009446.1 identified by match to protein family HMM TIGR00441; phosphoheptose isomerase 308689 gmhA 5122880 gmhA Dichelobacter nodosus VCS1703A phosphoheptose isomerase YP_001209210.1 308126 R 246195 CDS YP_001209211.1 146329164 5122394 308839..309642 1 NC_009446.1 identified by match to protein family HMM PF02673; match to protein family HMM TIGR00753; undecaprenol kinase 309642 5122394 DNO_0291 Dichelobacter nodosus VCS1703A undecaprenol kinase YP_001209211.1 308839 D 246195 CDS YP_001209212.1 146329721 5123101 309721..310194 1 NC_009446.1 identified by match to protein family HMM PF02556; match to protein family HMM TIGR00809; protein export chaperone SecB 310194 secB 5123101 secB Dichelobacter nodosus VCS1703A protein export chaperone SecB YP_001209212.1 309721 D 246195 CDS YP_001209213.1 146328777 5122272 310194..311189 1 NC_009446.1 identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03446; match to protein family HMM PF07479; glycerol-3-phosphate dehydrogenase 311189 5122272 DNO_0293 Dichelobacter nodosus VCS1703A glycerol-3-phosphate dehydrogenase YP_001209213.1 310194 D 246195 CDS YP_001209214.1 146329295 5123320 311204..311815 1 NC_009446.1 identified by match to protein family HMM PF00849; ribosomal large subunit pseudouridine synthase, RluA 311815 rluA 5123320 rluA Dichelobacter nodosus VCS1703A ribosomal large subunit pseudouridine synthase, RluA YP_001209214.1 311204 D 246195 CDS YP_001209215.1 146328781 5122513 complement(311826..312887) 1 NC_009446.1 identified by match to protein family HMM PF01594; hypothetical protein 312887 5122513 DNO_0295 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209215.1 311826 R 246195 CDS YP_001209216.1 146329028 5123467 complement(312988..314325) 1 NC_009446.1 identified by match to protein family HMM PF07219; match to protein family HMM PF07719; HemY protein 314325 5123467 DNO_0296 Dichelobacter nodosus VCS1703A HemY protein YP_001209216.1 312988 R 246195 CDS YP_001209217.1 146329746 5122724 complement(314328..316082) 1 NC_009446.1 hypothetical protein 316082 5122724 DNO_0297 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209217.1 314328 R 246195 CDS YP_001209218.1 146329235 5123357 complement(316079..316834) 1 NC_009446.1 identified by match to protein family HMM PF02602; uroporphyrinogen-III synthase family protein HemD 316834 hemD 5123357 hemD Dichelobacter nodosus VCS1703A uroporphyrinogen-III synthase family protein HemD YP_001209218.1 316079 R 246195 CDS YP_001209219.1 146329177 5122909 complement(316818..317735) 1 NC_009446.1 identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212; porphobilinogen deaminase 317735 hemC 5122909 hemC Dichelobacter nodosus VCS1703A porphobilinogen deaminase YP_001209219.1 316818 R 246195 CDS YP_001209220.1 146329503 5122258 317880..318254 1 NC_009446.1 lipoprotein 318254 5122258 DNO_0300 Dichelobacter nodosus VCS1703A lipoprotein YP_001209220.1 317880 D 246195 CDS YP_001209221.1 146329651 5123109 complement(318306..319091) 1 NC_009446.1 identified by match to protein family HMM PF07072; hypothetical protein 319091 5123109 DNO_0301 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209221.1 318306 R 246195 CDS YP_001209222.1 146329280 5122665 319459..323160 1 NC_009446.1 identified by match to protein family HMM PF00575; match to protein family HMM PF00923; match to protein family HMM TIGR00757; match to protein family HMM TIGR00876; ribonuclease E 323160 rne 5122665 rne Dichelobacter nodosus VCS1703A ribonuclease E YP_001209222.1 319459 D 246195 CDS YP_001209223.1 146329141 5123225 323153..323347 1 NC_009446.1 hypothetical protein 323347 5123225 DNO_0303 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209223.1 323153 D 246195 CDS YP_001209224.1 146329082 5123161 323337..324071 1 NC_009446.1 identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466; 3-deoxy-D-manno-octulosonate cytidylyltransferase 324071 kdsB 5123161 kdsB Dichelobacter nodosus VCS1703A 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_001209224.1 323337 D 246195 CDS YP_001209225.1 146328977 5123232 324064..325887 1 NC_009446.1 identified by match to protein family HMM PF00633; match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM PF08459; match to protein family HMM TIGR00194; excinuclease ABC subunit C 325887 uvrC 5123232 uvrC Dichelobacter nodosus VCS1703A excinuclease ABC subunit C YP_001209225.1 324064 D 246195 CDS YP_001209226.1 146329576 5122546 325889..326446 1 NC_009446.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 326446 pgsA 5122546 pgsA Dichelobacter nodosus VCS1703A CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001209226.1 325889 D 246195 CDS YP_001209227.1 146328835 5122833 326456..327076 1 NC_009446.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 327076 rnt 5122833 rnt Dichelobacter nodosus VCS1703A ribonuclease T YP_001209227.1 326456 D 246195 CDS YP_001209228.1 146329410 5123450 327073..327651 1 NC_009446.1 hypothetical protein 327651 5123450 DNO_0308 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209228.1 327073 D 246195 CDS YP_001209229.1 146329861 5122938 complement(327905..329068) 1 NC_009446.1 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 329068 nagA 5122938 nagA Dichelobacter nodosus VCS1703A N-acetylglucosamine-6-phosphate deacetylase YP_001209229.1 327905 R 246195 CDS YP_001209230.1 146329320 5122942 329383..329757 1 NC_009446.1 identified by match to protein family HMM PF04175; match to protein family HMM TIGR00743; hypothetical protein 329757 5122942 DNO_0310 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209230.1 329383 D 246195 CDS YP_001209231.1 146329139 5123085 329908..331362 1 NC_009446.1 identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 331362 5123085 DNO_0311 Dichelobacter nodosus VCS1703A N-acetylmuramoyl-L-alanine amidase YP_001209231.1 329908 D 246195 CDS YP_001209232.1 146328657 5122849 331599..333002 1 NC_009446.1 identified by match to protein family HMM PF00691; OmpA family domain-containing protein 333002 5122849 DNO_0312 Dichelobacter nodosus VCS1703A OmpA family domain-containing protein YP_001209232.1 331599 D 246195 CDS YP_001209233.1 146329173 5122500 333275..334792 1 NC_009446.1 lipoprotein 334792 5122500 DNO_0313 Dichelobacter nodosus VCS1703A lipoprotein YP_001209233.1 333275 D 246195 CDS YP_001209234.1 146329756 5122223 334816..335346 1 NC_009446.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 335346 fabA 5122223 fabA Dichelobacter nodosus VCS1703A 3-hydroxydecanoyl-ACP dehydratase YP_001209234.1 334816 D 246195 CDS YP_001209235.1 146329133 5123347 335424..336638 1 NC_009446.1 identified by match to protein family HMM PF00109; match to protein family HMM PF02801; beta-ketoacyl synthase 336638 fabB 5123347 fabB Dichelobacter nodosus VCS1703A beta-ketoacyl synthase YP_001209235.1 335424 D 246195 CDS YP_001209236.1 146328920 5122364 336643..337224 1 NC_009446.1 hypothetical protein 337224 5122364 DNO_0316 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209236.1 336643 D 246195 CDS YP_001209237.1 146328981 5122735 337237..337896 1 NC_009446.1 identified by match to protein family HMM PF02677; hypothetical protein 337896 5122735 DNO_0317 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209237.1 337237 D 246195 CDS YP_001209238.1 146329126 5122497 338072..339031 1 NC_009446.1 identified by match to protein family HMM PF01471; hypothetical protein 339031 5122497 DNO_0318 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209238.1 338072 D 246195 CDS YP_001209239.1 146328961 5123267 339175..340284 1 NC_009446.1 identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; queuine tRNA-ribosyltransferase 340284 tgt 5123267 tgt Dichelobacter nodosus VCS1703A queuine tRNA-ribosyltransferase YP_001209239.1 339175 D 246195 CDS YP_001209240.1 146329003 5122337 complement(340376..340984) 1 NC_009446.1 identified by match to protein family HMM PF00691; OmpA family protein 340984 5122337 DNO_0320 Dichelobacter nodosus VCS1703A OmpA family protein YP_001209240.1 340376 R 246195 CDS YP_001209241.1 146329479 5122685 341292..343877 1 NC_009446.1 identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 343877 gyrA 5122685 gyrA Dichelobacter nodosus VCS1703A DNA gyrase subunit A YP_001209241.1 341292 D 246195 CDS YP_001209242.1 146329186 5122619 344146..344424 1 NC_009446.1 identified by match to protein family HMM PF05656; hypothetical protein 344424 5122619 DNO_0322 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209242.1 344146 D 246195 CDS YP_001209243.1 146329732 5122509 complement(344488..345483) 1 NC_009446.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR01124; threonine dehydratase 345483 ilvA 5122509 ilvA Dichelobacter nodosus VCS1703A threonine dehydratase YP_001209243.1 344488 R 246195 CDS YP_001209244.1 146329530 5123371 345802..347187 1 NC_009446.1 identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase 347187 dnaB 5123371 dnaB Dichelobacter nodosus VCS1703A replicative DNA helicase YP_001209244.1 345802 D 246195 CDS YP_001209245.1 146328630 5122618 347188..348261 1 NC_009446.1 identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 348261 alr 5122618 alr Dichelobacter nodosus VCS1703A alanine racemase YP_001209245.1 347188 D 246195 CDS YP_001209246.1 146328979 5122405 348254..349618 1 NC_009446.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 349618 radA 5122405 radA Dichelobacter nodosus VCS1703A DNA repair protein RadA YP_001209246.1 348254 D 246195 CDS YP_001209247.1 146329538 5123392 349622..350512 1 NC_009446.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP--glucose-1-phosphate uridylyltransferase 350512 galU 5123392 galU Dichelobacter nodosus VCS1703A UTP--glucose-1-phosphate uridylyltransferase YP_001209247.1 349622 D 246195 CDS YP_001209248.1 146329376 5122673 350587..351003 1 NC_009446.1 identified by match to protein family HMM PF01797; transposase IS200-like protein 351003 5122673 DNO_0328 Dichelobacter nodosus VCS1703A transposase IS200-like protein YP_001209248.1 350587 D 246195 CDS YP_001209249.1 146329136 5123126 351042..353795 1 NC_009446.1 identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239; 2-oxoglutarate dehydrogenase, E1 component 353795 sucA 5123126 sucA Dichelobacter nodosus VCS1703A 2-oxoglutarate dehydrogenase, E1 component YP_001209249.1 351042 D 246195 CDS YP_001209250.1 146329619 5123094 353831..354856 1 NC_009446.1 identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM TIGR01347; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 354856 sucB 5123094 sucB Dichelobacter nodosus VCS1703A 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase YP_001209250.1 353831 D 246195 CDS YP_001209251.1 146329232 5122253 complement(354853..356694) 1 NC_009446.1 identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; competence family protein 356694 5122253 DNO_0330 Dichelobacter nodosus VCS1703A competence family protein YP_001209251.1 354853 R 246195 CDS YP_001209252.1 146329036 5122231 356716..357267 1 NC_009446.1 hypothetical protein 357267 5122231 DNO_0332 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209252.1 356716 D 246195 CDS YP_001209253.1 146329067 5122683 357509..358405 1 NC_009446.1 identified by match to protein family HMM PF00691; OmpA family protein 358405 5122683 DNO_0333 Dichelobacter nodosus VCS1703A OmpA family protein YP_001209253.1 357509 D 246195 CDS YP_001209254.1 146328651 5123149 358452..366740 1 NC_009446.1 identified by match to protein family HMM PF00353; RTX family protein 366740 5123149 DNO_0334 Dichelobacter nodosus VCS1703A RTX family protein YP_001209254.1 358452 D 246195 CDS YP_001209255.1 146329229 5122329 366787..367674 1 NC_009446.1 identified by match to protein family HMM PF01061; ABC-2 type transporter family protein 367674 5122329 DNO_0335 Dichelobacter nodosus VCS1703A ABC-2 type transporter family protein YP_001209255.1 366787 D 246195 CDS YP_001209256.1 146329509 5123276 367684..368385 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter 368385 5123276 DNO_0336 Dichelobacter nodosus VCS1703A ABC transporter YP_001209256.1 367684 D 246195 CDS YP_001209257.1 146329789 5122291 368557..369702 1 NC_009446.1 identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase 369702 glf 5122291 glf Dichelobacter nodosus VCS1703A UDP-galactopyranose mutase YP_001209257.1 368557 D 246195 CDS YP_001209258.1 146328882 5122450 369703..370668 1 NC_009446.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 370668 5122450 DNO_0339 Dichelobacter nodosus VCS1703A glycosyl transferase family protein YP_001209258.1 369703 D 246195 CDS YP_001209259.1 146329615 5122157 370682..372037 1 NC_009446.1 identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025; sugar transferase 372037 5122157 DNO_0340 Dichelobacter nodosus VCS1703A sugar transferase YP_001209259.1 370682 D 246195 CDS YP_001209260.1 146329486 5123265 complement(372099..372722) 1 NC_009446.1 identified by match to protein family HMM PF05951; match to protein family HMM PF08291; match to protein family HMM TIGR01409; hypothetical protein 372722 5123265 DNO_0341 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209260.1 372099 R 246195 CDS YP_001209261.1 146329337 5122704 372987..373658 1 NC_009446.1 hypothetical protein 373658 5122704 DNO_0342 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209261.1 372987 D 246195 CDS YP_001209262.1 146328766 5122846 373655..374227 1 NC_009446.1 identified by match to protein family HMM PF01300; hypothetical protein 374227 5122846 DNO_0343 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209262.1 373655 D 246195 CDS YP_001209263.1 146329091 5122723 374487..375500 1 NC_009446.1 type IV fimbrial biogenesis protein PilM 375500 pilM 5122723 pilM Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis protein PilM YP_001209263.1 374487 D 246195 CDS YP_001209264.1 146328992 5123376 375500..376147 1 NC_009446.1 identified by match to protein family HMM PF05137; type IV fimbrial assembly protein PilN 376147 pilN 5123376 pilN Dichelobacter nodosus VCS1703A type IV fimbrial assembly protein PilN YP_001209264.1 375500 D 246195 CDS YP_001209265.1 146328914 5122702 376160..376828 1 NC_009446.1 type IV fimbrial biogenesis protein PilO 376828 pilO 5122702 pilO Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis protein PilO YP_001209265.1 376160 D 246195 CDS YP_001209266.1 146329460 5122758 376844..377464 1 NC_009446.1 type IV fimbrial biogenesis protein PilP 377464 pilP 5122758 pilP Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis protein PilP YP_001209266.1 376844 D 246195 CDS YP_001209267.1 146328722 5122787 377487..379691 1 NC_009446.1 identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM PF07660; match to protein family HMM TIGR02515; type IV fimbrial pore PilQ 379691 pilQ 5122787 pilQ Dichelobacter nodosus VCS1703A type IV fimbrial pore PilQ YP_001209267.1 377487 D 246195 CDS YP_001209268.1 146329294 5123246 379752..381188 1 NC_009446.1 identified by match to protein family HMM PF01162; match to protein family HMM PF02637; match to protein family HMM PF02934; match to protein family HMM TIGR00133; glutamyl-tRNA(Gln) amidotransferase subunit B 381188 gatB 5123246 gatB Dichelobacter nodosus VCS1703A glutamyl-tRNA(Gln) amidotransferase subunit B YP_001209268.1 379752 D 246195 CDS YP_001209269.1 146328653 5122511 381264..383087 1 NC_009446.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 383087 typA 5122511 typA Dichelobacter nodosus VCS1703A GTP-binding protein TypA YP_001209269.1 381264 D 246195 CDS YP_001209270.1 146328845 5122838 383207..386005 1 NC_009446.1 identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00422; valyl-tRNA synthetase 386005 valS 5122838 valS Dichelobacter nodosus VCS1703A valyl-tRNA synthetase YP_001209270.1 383207 D 246195 CDS YP_001209271.1 146329715 5122495 386211..387716 1 NC_009446.1 identified by match to protein family HMM PF03577; U32 family peptidase 387716 5122495 DNO_0352 Dichelobacter nodosus VCS1703A U32 family peptidase YP_001209271.1 386211 D 246195 CDS YP_001209272.1 146329243 5123027 complement(387778..388209) 1 NC_009446.1 identified by match to protein family HMM PF01258; match to protein family HMM TIGR02420; RNA polymerase-binding protein DksA 388209 dksA 5123027 dksA Dichelobacter nodosus VCS1703A RNA polymerase-binding protein DksA YP_001209272.1 387778 R 246195 CDS YP_001209273.1 146329371 5123283 complement(388268..389074) 1 NC_009446.1 identified by match to protein family HMM PF00950; zinc uptake system protein 389074 5123283 DNO_0354 Dichelobacter nodosus VCS1703A zinc uptake system protein YP_001209273.1 388268 R 246195 CDS YP_001209274.1 146329443 5123291 complement(389071..389766) 1 NC_009446.1 identified by match to protein family HMM PF00005; zinc uptake system ATP-binding protein 389766 5123291 DNO_0355 Dichelobacter nodosus VCS1703A zinc uptake system ATP-binding protein YP_001209274.1 389071 R 246195 CDS YP_001209275.1 146329451 5123015 389822..391954 1 NC_009446.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00595; primosomal protein N' 391954 priA 5123015 priA Dichelobacter nodosus VCS1703A primosomal protein N' YP_001209275.1 389822 D 246195 CDS YP_001209276.1 146328796 5122283 392027..392230 1 NC_009446.1 hypothetical protein 392230 5122283 DNO_0357 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209276.1 392027 D 246195 CDS YP_001209277.1 146329281 5123451 complement(392304..395444) 1 NC_009446.1 hypothetical protein 395444 5123451 DNO_0358 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209277.1 392304 R 246195 CDS YP_001209278.1 146329382 5123224 395644..396891 1 NC_009446.1 identified by match to protein family HMM PF01171; match to protein family HMM PF09179; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase 396891 tilS 5123224 tilS Dichelobacter nodosus VCS1703A tRNA(Ile)-lysidine synthetase YP_001209278.1 395644 D 246195 CDS YP_001209279.1 146329618 5123087 396938..398572 1 NC_009446.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 398572 pyrG 5123087 pyrG Dichelobacter nodosus VCS1703A CTP synthetase YP_001209279.1 396938 D 246195 CDS YP_001209280.1 146329714 5122293 398569..399402 1 NC_009446.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 399402 kdsA 5122293 kdsA Dichelobacter nodosus VCS1703A 2-dehydro-3-deoxyphosphooctonate aldolase YP_001209280.1 398569 D 246195 CDS YP_001209281.1 146328962 5122982 399399..400691 1 NC_009446.1 identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; enolase 400691 eno 5122982 eno Dichelobacter nodosus VCS1703A enolase YP_001209281.1 399399 D 246195 CDS YP_001209282.1 146328819 5122198 400749..401231 1 NC_009446.1 identified by match to protein family HMM PF04977; septum formation initiator family protein 401231 5122198 DNO_0363 Dichelobacter nodosus VCS1703A septum formation initiator family protein YP_001209282.1 400749 D 246195 CDS YP_001209283.1 146329817 5123422 401331..403190 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter 403190 5123422 DNO_0364 Dichelobacter nodosus VCS1703A ABC transporter YP_001209283.1 401331 D 246195 CDS YP_001209284.1 146328855 5122820 403191..404381 1 NC_009446.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR00619; exonuclease SbcD 404381 sbcD 5122820 sbcD Dichelobacter nodosus VCS1703A exonuclease SbcD YP_001209284.1 403191 D 246195 CDS YP_001209285.1 146329428 5122586 404371..407337 1 NC_009446.1 identified by match to protein family HMM PF02463; exonuclease SbcC 407337 sbcC 5122586 sbcC Dichelobacter nodosus VCS1703A exonuclease SbcC YP_001209285.1 404371 D 246195 CDS YP_001209286.1 146329461 5123188 407341..408324 1 NC_009446.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase family protein 408324 5123188 DNO_0367 Dichelobacter nodosus VCS1703A zinc-binding dehydrogenase family protein YP_001209286.1 407341 D 246195 CDS YP_001209287.1 146328857 5122800 complement(408332..409201) 1 NC_009446.1 identified by match to protein family HMM PF04018; hypothetical protein 409201 5122800 DNO_0368 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209287.1 408332 R 246195 CDS YP_001209288.1 146329109 5122585 complement(409209..410732) 1 NC_009446.1 identified by match to protein family HMM PF02541; exopolyphosphatase 410732 5122585 DNO_0369 Dichelobacter nodosus VCS1703A exopolyphosphatase YP_001209288.1 409209 R 246195 CDS YP_001209289.1 146329156 5122404 complement(410834..411358) 1 NC_009446.1 identified by match to protein family HMM PF05981; lipoprotein 411358 5122404 DNO_0370 Dichelobacter nodosus VCS1703A lipoprotein YP_001209289.1 410834 R 246195 CDS YP_001209290.1 146329761 5123003 complement(411355..412146) 1 NC_009446.1 hypothetical protein 412146 5123003 DNO_0371 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209290.1 411355 R 246195 CDS YP_001209291.1 146329879 5123342 complement(412127..412579) 1 NC_009446.1 identified by match to protein family HMM PF01957; hypothetical protein 412579 5123342 DNO_0372 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209291.1 412127 R 246195 CDS YP_001209292.1 146329484 5122993 complement(412576..413514) 1 NC_009446.1 identified by match to protein family HMM PF01145; SPFH domain-containing protein 413514 5122993 DNO_0373 Dichelobacter nodosus VCS1703A SPFH domain-containing protein YP_001209292.1 412576 R 246195 CDS YP_001209293.1 146329008 5122647 413593..414156 1 NC_009446.1 hypothetical protein 414156 5122647 DNO_0374 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209293.1 413593 D 246195 CDS YP_001209294.1 146329093 5122744 414149..414613 1 NC_009446.1 hypothetical protein 414613 5122744 DNO_0375 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209294.1 414149 D 246195 CDS YP_001209295.1 146329735 5122537 414796..416250 1 NC_009446.1 identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 416250 guaB 5122537 guaB Dichelobacter nodosus VCS1703A inosine-5'-monophosphate dehydrogenase YP_001209295.1 414796 D 246195 CDS YP_001209296.1 146329767 5123368 416362..417108 1 NC_009446.1 extracellular solute-binding family protein 417108 5123368 DNO_0377 Dichelobacter nodosus VCS1703A extracellular solute-binding family protein YP_001209296.1 416362 D 246195 CDS YP_001209297.1 146329230 5123336 417092..417193 1 NC_009446.1 hypothetical protein 417193 5123336 DNO_0378 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209297.1 417092 D 246195 CDS YP_001209298.1 146329205 5122853 417233..417619 1 NC_009446.1 hypothetical protein 417619 5122853 DNO_0379 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209298.1 417233 D 246195 CDS YP_001209299.1 146329608 5122147 417628..419181 1 NC_009446.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 419181 guaA 5122147 guaA Dichelobacter nodosus VCS1703A GMP synthase YP_001209299.1 417628 D 246195 CDS YP_001209300.1 146329276 5122234 complement(419271..421265) 1 NC_009446.1 identified by match to protein family HMM PF00580; DNA helicase UvrD 421265 uvrD-2 5122234 uvrD-2 Dichelobacter nodosus VCS1703A DNA helicase UvrD YP_001209300.1 419271 R 246195 CDS YP_001209301.1 146328903 5122341 complement(423569..425506) 1 NC_009446.1 outer membrane protein 1E 425506 omp1E 5122341 omp1E Dichelobacter nodosus VCS1703A outer membrane protein 1E YP_001209301.1 423569 R 246195 CDS YP_001209302.1 146329127 5122792 425776..427914 1 NC_009446.1 outer membrane protein 1D 427914 omp1D 5122792 omp1D Dichelobacter nodosus VCS1703A outer membrane protein 1D YP_001209302.1 425776 D 246195 CDS YP_001209303.1 146329562 5122715 complement(430190..430543) 1 NC_009446.1 identified by match to protein family HMM PF01797; transposase IS200-like protein 430543 5122715 DNO_0386 Dichelobacter nodosus VCS1703A transposase IS200-like protein YP_001209303.1 430190 R 246195 CDS YP_001209304.1 146329314 5122860 430565..431692 1 NC_009446.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 431692 5122860 DNO_0387 Dichelobacter nodosus VCS1703A IS605 family transposase YP_001209304.1 430565 D 246195 CDS YP_001209305.1 146328906 5123074 complement(431884..432333) 1 NC_009446.1 identified by match to protein family HMM PF00300; hypothetical protein 432333 5123074 DNO_0388 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209305.1 431884 R 246195 CDS YP_001209306.1 146329194 5122780 complement(432437..434473) 1 NC_009446.1 identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; NAD-dependent DNA ligase 434473 ligA 5122780 ligA Dichelobacter nodosus VCS1703A NAD-dependent DNA ligase YP_001209306.1 432437 R 246195 CDS YP_001209307.1 146328773 5123078 complement(434452..435096) 1 NC_009446.1 hypothetical protein 435096 5123078 DNO_0390 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209307.1 434452 R 246195 CDS YP_001209308.1 146329655 5122518 435550..436149 1 NC_009446.1 identified by match to protein family HMM PF01926; GTPase 436149 5122518 DNO_0391 Dichelobacter nodosus VCS1703A GTPase YP_001209308.1 435550 D 246195 CDS YP_001209309.1 146329063 5122561 436154..436930 1 NC_009446.1 identified by match to protein family HMM PF01925; hypothetical protein 436930 5122561 DNO_0392 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209309.1 436154 D 246195 CDS YP_001209310.1 146329611 5122154 437011..438036 1 NC_009446.1 identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; L-asparaginase II 438036 5122154 DNO_0393 Dichelobacter nodosus VCS1703A L-asparaginase II YP_001209310.1 437011 D 246195 CDS YP_001209311.1 146328646 5122326 complement(438192..439496) 1 NC_009446.1 identified by match to protein family HMM PF01136; U32 family peptidase 439496 5122326 DNO_0394 Dichelobacter nodosus VCS1703A U32 family peptidase YP_001209311.1 438192 R 246195 CDS YP_001209312.1 146329513 5123075 439603..440067 1 NC_009446.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 440067 luxS 5123075 luxS Dichelobacter nodosus VCS1703A S-ribosylhomocysteinase YP_001209312.1 439603 D 246195 CDS YP_001209313.1 146329383 5122490 complement(440074..441360) 1 NC_009446.1 identified by match to protein family HMM PF00654; voltage-gated chloride channel protein 441360 5122490 DNO_0396 Dichelobacter nodosus VCS1703A voltage-gated chloride channel protein YP_001209313.1 440074 R 246195 CDS YP_001209314.1 146329064 5122986 complement(441367..442230) 1 NC_009446.1 identified by match to protein family HMM PF01040; 4-hydroxybenzoate polyprenyltransferase 442230 ubiA 5122986 ubiA Dichelobacter nodosus VCS1703A 4-hydroxybenzoate polyprenyltransferase YP_001209314.1 441367 R 246195 CDS YP_001209315.1 146329667 5122973 442447..444108 1 NC_009446.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 444108 5122973 DNO_0398 Dichelobacter nodosus VCS1703A putative ABC transporter ATP-binding protein YP_001209315.1 442447 D 246195 CDS YP_001209316.1 146329292 5123190 444257..445102 1 NC_009446.1 identified by match to protein family HMM PF03668; hypothetical protein 445102 5123190 DNO_0399 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209316.1 444257 D 246195 CDS YP_001209317.1 146329634 5122506 complement(445152..445688) 1 NC_009446.1 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; hypothetical protein 445688 5122506 DNO_0400 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209317.1 445152 R 246195 CDS YP_001209318.1 146329085 5122324 complement(445688..445879) 1 NC_009446.1 lipoprotein 445879 5122324 DNO_0401 Dichelobacter nodosus VCS1703A lipoprotein YP_001209318.1 445688 R 246195 CDS YP_001209319.1 146329221 5123324 complement(445916..446629) 1 NC_009446.1 identified by match to protein family HMM PF02674; colicin V family protein CvpA 446629 5123324 DNO_0402 Dichelobacter nodosus VCS1703A colicin V family protein CvpA YP_001209319.1 445916 R 246195 CDS YP_001209320.1 146329764 5123083 complement(446642..447247) 1 NC_009446.1 identified by match to protein family HMM PF05036; hypothetical protein 447247 5123083 DNO_0403 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209320.1 446642 R 246195 CDS YP_001209321.1 146329525 5123339 complement(447253..448521) 1 NC_009446.1 identified by match to protein family HMM PF08245; match to protein family HMM TIGR01499; folylpolyglutamate synthase 448521 folC 5123339 folC Dichelobacter nodosus VCS1703A folylpolyglutamate synthase YP_001209321.1 447253 R 246195 CDS YP_001209322.1 146329415 5122551 complement(448518..449543) 1 NC_009446.1 identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta 449543 accD 5122551 accD Dichelobacter nodosus VCS1703A acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001209322.1 448518 R 246195 CDS YP_001209323.1 146329037 5122255 complement(450314..450565) 1 NC_009446.1 hypothetical protein 450565 5122255 DNO_0406 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209323.1 450314 R 246195 CDS YP_001209324.1 146328815 5122964 complement(450577..450735) 1 NC_009446.1 identified by match to protein family HMM PF08085; lipoprotein 450735 5122964 DNO_0407 Dichelobacter nodosus VCS1703A lipoprotein YP_001209324.1 450577 R 246195 CDS YP_001209325.1 146329137 5123427 450954..452528 1 NC_009446.1 exonuclease V, alpha subunit 452528 recD 5123427 recD Dichelobacter nodosus VCS1703A exonuclease V, alpha subunit YP_001209325.1 450954 D 246195 CDS YP_001209326.1 146329427 5123308 complement(453413..454381) 1 NC_009446.1 identified by match to protein family HMM PF03773; hypothetical protein 454381 5123308 DNO_0412 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209326.1 453413 R 246195 CDS YP_001209327.1 146328887 5122996 complement(454391..454696) 1 NC_009446.1 identified by match to protein family HMM TIGR00412; redox-active disulfide protein family 454696 5122996 DNO_0413 Dichelobacter nodosus VCS1703A redox-active disulfide protein family YP_001209327.1 454391 R 246195 CDS YP_001209328.1 146329222 5123419 complement(454883..455407) 1 NC_009446.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01090; adenine phosphoribosyltransferase 455407 apt 5123419 apt Dichelobacter nodosus VCS1703A adenine phosphoribosyltransferase YP_001209328.1 454883 R 246195 CDS YP_001209329.1 146329422 5123026 455542..456300 1 NC_009446.1 identified by match to protein family HMM PF01026; TatD family DNase 456300 5123026 DNO_0415 Dichelobacter nodosus VCS1703A TatD family DNase YP_001209329.1 455542 D 246195 CDS YP_001209330.1 146329057 5122453 456300..457004 1 NC_009446.1 identified by match to protein family HMM PF00899; ThiF domain-containing protein 457004 5122453 DNO_0416 Dichelobacter nodosus VCS1703A ThiF domain-containing protein YP_001209330.1 456300 D 246195 CDS YP_001209331.1 146328954 5122859 457088..457336 1 NC_009446.1 identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 457336 rpmE 5122859 rpmE Dichelobacter nodosus VCS1703A 50S ribosomal protein L31 YP_001209331.1 457088 D 246195 CDS YP_001209332.1 146329132 5122610 457660..459486 1 NC_009446.1 identified by match to protein family HMM PF00085; match to protein family HMM PF02683; thiol:disulfide interchange protein DsbD 459486 dsbD 5122610 dsbD Dichelobacter nodosus VCS1703A thiol:disulfide interchange protein DsbD YP_001209332.1 457660 D 246195 CDS YP_001209333.1 146329849 5123317 459636..460079 1 NC_009446.1 identified by match to protein family HMM PF01220; match to protein family HMM TIGR01088; 3-dehydroquinate dehydratase 460079 aroQ 5123317 aroQ Dichelobacter nodosus VCS1703A 3-dehydroquinate dehydratase YP_001209333.1 459636 D 246195 CDS YP_001209334.1 146328938 5123080 460104..460568 1 NC_009446.1 identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 460568 accB 5123080 accB Dichelobacter nodosus VCS1703A acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001209334.1 460104 D 246195 CDS YP_001209335.1 146329352 5122667 460579..461922 1 NC_009446.1 identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase 461922 accC 5122667 accC Dichelobacter nodosus VCS1703A acetyl-CoA carboxylase, biotin carboxylase YP_001209335.1 460579 D 246195 CDS YP_001209336.1 146329726 5122301 461919..462803 1 NC_009446.1 identified by match to protein family HMM PF06325; match to protein family HMM TIGR00406; 50S ribosomal protein L11 methyltransferase 462803 prmA 5122301 prmA Dichelobacter nodosus VCS1703A 50S ribosomal protein L11 methyltransferase YP_001209336.1 461919 D 246195 CDS YP_001209337.1 146329061 5123046 462804..463760 1 NC_009446.1 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; dihydrouridine synthase 463760 5123046 DNO_0423 Dichelobacter nodosus VCS1703A dihydrouridine synthase YP_001209337.1 462804 D 246195 CDS YP_001209338.1 146329903 5122862 463783..464208 1 NC_009446.1 identified by match to protein family HMM PF02643; hypothetical protein 464208 5122862 DNO_0425 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209338.1 463783 D 246195 CDS YP_001209339.1 146329191 5123236 complement(464201..465043) 1 NC_009446.1 hypothetical protein 465043 5123236 DNO_0424 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209339.1 464201 R 246195 CDS YP_001209340.1 146328640 5123139 complement(465055..466344) 1 NC_009446.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 466344 5123139 DNO_0426 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209340.1 465055 R 246195 CDS YP_001209341.1 146329354 5122135 complement(466361..467140) 1 NC_009446.1 identified by match to protein family HMM PF01578; hypothetical protein 467140 5122135 DNO_0427 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209341.1 466361 R 246195 CDS YP_001209342.1 146328752 5122290 467236..468594 1 NC_009446.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 468594 ffh 5122290 ffh Dichelobacter nodosus VCS1703A signal recognition particle protein YP_001209342.1 467236 D 246195 CDS YP_001209343.1 146329839 5122195 complement(468668..469996) 1 NC_009446.1 identified by match to protein family HMM PF00557; match to protein family HMM PF05195; xaa-pro aminopeptidase 469996 5122195 DNO_0429 Dichelobacter nodosus VCS1703A xaa-pro aminopeptidase YP_001209343.1 468668 R 246195 CDS YP_001209344.1 146329041 5122861 complement(470154..470459) 1 NC_009446.1 hypothetical protein 470459 5122861 DNO_0430 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209344.1 470154 R 246195 CDS YP_001209345.1 146329467 5122412 complement(470548..471330) 1 NC_009446.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 471330 xth-1 5122412 xth-1 Dichelobacter nodosus VCS1703A exodeoxyribonuclease III YP_001209345.1 470548 R 246195 CDS YP_001209346.1 146329259 5122143 471389..471496 1 NC_009446.1 hypothetical protein 471496 5122143 DNO_0432 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209346.1 471389 D 246195 CDS YP_001209347.1 146328991 5122812 471489..472211 1 NC_009446.1 identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; hypothetical protein 472211 5122812 DNO_0433 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209347.1 471489 D 246195 CDS YP_001209348.1 146329159 5122747 472211..473956 1 NC_009446.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; two-componenent sensor PilS 473956 pilS 5122747 pilS Dichelobacter nodosus VCS1703A two-componenent sensor PilS YP_001209348.1 472211 D 246195 CDS YP_001209349.1 146328704 5123067 473960..475546 1 NC_009446.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; two-component response regulator PilR 475546 pilR 5123067 pilR Dichelobacter nodosus VCS1703A two-component response regulator PilR YP_001209349.1 473960 D 246195 CDS YP_001209350.1 146328696 5122267 475546..476538 1 NC_009446.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179; UDP-N-acetylenolpyruvoylglucosamine reductase 476538 murB 5122267 murB Dichelobacter nodosus VCS1703A UDP-N-acetylenolpyruvoylglucosamine reductase YP_001209350.1 475546 D 246195 CDS YP_001209351.1 146328917 5122368 476535..477194 1 NC_009446.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; haloacid dehalogenase-like hydrolase family protein 477194 5122368 DNO_0437 Dichelobacter nodosus VCS1703A haloacid dehalogenase-like hydrolase family protein YP_001209351.1 476535 D 246195 CDS YP_001209352.1 146329333 5122745 477191..477538 1 NC_009446.1 identified by match to protein family HMM PF06155; hypothetical protein 477538 5122745 DNO_0438 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209352.1 477191 D 246195 CDS YP_001209353.1 146329400 5123248 477541..478302 1 NC_009446.1 identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01934; ubiquinone-menaquinone biosynthesis methyltransferase 478302 ubiE 5123248 ubiE Dichelobacter nodosus VCS1703A ubiquinone-menaquinone biosynthesis methyltransferase YP_001209353.1 477541 D 246195 CDS YP_001209354.1 146328694 5123204 478316..478927 1 NC_009446.1 identified by match to protein family HMM PF06843; hypothetical protein 478927 5123204 DNO_0440 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209354.1 478316 D 246195 CDS YP_001209355.1 146329588 5122917 478911..480491 1 NC_009446.1 identified by match to protein family HMM PF03109; match to protein family HMM TIGR01982; 2-polyprenylphenol 6-hydroxylase 480491 ubiB 5122917 ubiB Dichelobacter nodosus VCS1703A 2-polyprenylphenol 6-hydroxylase YP_001209355.1 478911 D 246195 CDS YP_001209356.1 146329850 5123136 480649..482046 1 NC_009446.1 catalyzes the formation of phenol and pyruvate from tyrosine; tyrosine phenol-lyase 482046 5123136 DNO_0442 Dichelobacter nodosus VCS1703A tyrosine phenol-lyase YP_001209356.1 480649 D 246195 CDS YP_001209357.1 146329185 5123107 complement(482304..483944) 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02463; ABC transporter 483944 5123107 DNO_0443 Dichelobacter nodosus VCS1703A ABC transporter YP_001209357.1 482304 R 246195 CDS YP_001209358.1 146329678 5122379 complement(484009..485763) 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter 485763 5122379 DNO_0444 Dichelobacter nodosus VCS1703A ABC transporter YP_001209358.1 484009 R 246195 CDS YP_001209359.1 146329632 5122952 complement(485766..486371) 1 NC_009446.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 486371 5122952 DNO_0445 Dichelobacter nodosus VCS1703A TetR family transcriptional regulator YP_001209359.1 485766 R 246195 CDS YP_001209360.1 146328793 5122278 488098..488385 1 NC_009446.1 identified by match to protein family HMM PF00076; RNA recognition motif-containing protein 488385 5122278 DNO_0446 Dichelobacter nodosus VCS1703A RNA recognition motif-containing protein YP_001209360.1 488098 D 246195 CDS YP_001209361.1 146329331 5123454 488585..489769 1 NC_009446.1 identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase 489769 ackA 5123454 ackA Dichelobacter nodosus VCS1703A acetate kinase YP_001209361.1 488585 D 246195 CDS YP_001209362.1 146328905 5123124 489780..491837 1 NC_009446.1 identified by match to protein family HMM PF01515; match to protein family HMM PF07085; match to protein family HMM TIGR00651; phosphate acetyltransferase 491837 pta 5123124 pta Dichelobacter nodosus VCS1703A phosphate acetyltransferase YP_001209362.1 489780 D 246195 CDS YP_001209363.1 146328786 5122788 491952..492167 1 NC_009446.1 identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; sec-independent protein translocase family protein TatA 492167 5122788 DNO_0449 Dichelobacter nodosus VCS1703A sec-independent protein translocase family protein TatA YP_001209363.1 491952 D 246195 CDS YP_001209364.1 146329548 5123462 492170..492604 1 NC_009446.1 identified by match to protein family HMM PF02416; match to protein family HMM TIGR01410; sec-independent protein translocase protein TatB 492604 5123462 DNO_0450 Dichelobacter nodosus VCS1703A sec-independent protein translocase protein TatB YP_001209364.1 492170 D 246195 CDS YP_001209365.1 146329896 5122622 492627..493343 1 NC_009446.1 identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; sec-independent protein translocase TatC 493343 tatC 5122622 tatC Dichelobacter nodosus VCS1703A sec-independent protein translocase TatC YP_001209365.1 492627 D 246195 CDS YP_001209366.1 146328947 5122391 complement(493370..494944) 1 NC_009446.1 identified by match to protein family HMM PF00496; oligopeptide transport protein 494944 5122391 DNO_0452 Dichelobacter nodosus VCS1703A oligopeptide transport protein YP_001209366.1 493370 R 246195 CDS YP_001209367.1 146329437 5122630 complement(494853..495077) 1 NC_009446.1 hypothetical protein 495077 5122630 DNO_0453 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209367.1 494853 R 246195 CDS YP_001209368.1 146328993 5123030 495139..496077 1 NC_009446.1 identified by match to protein family HMM PF00528; ABC transporter family protein 496077 5123030 DNO_0454 Dichelobacter nodosus VCS1703A ABC transporter family protein YP_001209368.1 495139 D 246195 CDS YP_001209369.1 146329883 5122805 496047..496925 1 NC_009446.1 identified by match to protein family HMM PF00528; ABC transporter family protein 496925 5122805 DNO_0455 Dichelobacter nodosus VCS1703A ABC transporter family protein YP_001209369.1 496047 D 246195 CDS YP_001209370.1 146329338 5123196 496925..498514 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter 498514 5123196 DNO_0456 Dichelobacter nodosus VCS1703A ABC transporter YP_001209370.1 496925 D 246195 CDS YP_001209371.1 146329752 5123185 498529..498954 1 NC_009446.1 identified by match to protein family HMM PF04364; DNA polymerase III subunit chi 498954 holC 5123185 holC Dichelobacter nodosus VCS1703A DNA polymerase III subunit chi YP_001209371.1 498529 D 246195 CDS YP_001209372.1 146328860 5123351 complement(498960..499490) 1 NC_009446.1 flavodoxin family protein 499490 5123351 DNO_0458 Dichelobacter nodosus VCS1703A flavodoxin family protein YP_001209372.1 498960 R 246195 CDS YP_001209373.1 146329751 5122547 complement(500008..500613) 1 NC_009446.1 lipoprotein 500613 5122547 DNO_0460 Dichelobacter nodosus VCS1703A lipoprotein YP_001209373.1 500008 R 246195 CDS YP_001209374.1 146328736 5123352 complement(500864..501142) 1 NC_009446.1 hypothetical protein 501142 5123352 DNO_0461 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209374.1 500864 R 246195 CDS YP_001209375.1 146329313 5123013 complement(501199..502290) 1 NC_009446.1 lipoprotein 502290 5123013 DNO_0462 Dichelobacter nodosus VCS1703A lipoprotein YP_001209375.1 501199 R 246195 CDS YP_001209376.1 146329020 5123275 502948..503649 1 NC_009446.1 hypothetical protein 503649 5123275 DNO_0464 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209376.1 502948 D 246195 CDS YP_001209377.1 146328901 5122770 503658..504218 1 NC_009446.1 identified by match to protein family HMM PF04279; intracellular septation protein A 504218 ispZ 5122770 ispZ Dichelobacter nodosus VCS1703A intracellular septation protein A YP_001209377.1 503658 D 246195 CDS YP_001209378.1 146329158 5122799 complement(504209..504523) 1 NC_009446.1 hypothetical protein 504523 5122799 DNO_0465 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209378.1 504209 R 246195 CDS YP_001209379.1 146328738 5123081 complement(504547..504879) 1 NC_009446.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; hypothetical protein 504879 5123081 DNO_0467 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209379.1 504547 R 246195 CDS YP_001209380.1 146329027 5122285 complement(504944..505954) 1 NC_009446.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 505954 fbp 5122285 fbp Dichelobacter nodosus VCS1703A fructose-1,6-bisphosphatase YP_001209380.1 504944 R 246195 CDS YP_001209381.1 146328712 5122793 complement(506037..506510) 1 NC_009446.1 identified by match to protein family HMM PF01037; transcription regulator AsnC 506510 5122793 DNO_0469 Dichelobacter nodosus VCS1703A transcription regulator AsnC YP_001209381.1 506037 R 246195 CDS YP_001209382.1 146329208 5122200 complement(506691..507128) 1 NC_009446.1 identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB 507128 nusB 5122200 nusB Dichelobacter nodosus VCS1703A transcription antitermination factor NusB YP_001209382.1 506691 R 246195 CDS YP_001209383.1 146329204 5122874 complement(507125..507607) 1 NC_009446.1 identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114; 6,7-dimethyl-8-ribityllumazine synthase 507607 ribH 5122874 ribH Dichelobacter nodosus VCS1703A 6,7-dimethyl-8-ribityllumazine synthase YP_001209383.1 507125 R 246195 CDS YP_001209384.1 146329010 5123089 complement(507669..508775) 1 NC_009446.1 identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 508775 ribB 5123089 ribB Dichelobacter nodosus VCS1703A 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001209384.1 507669 R 246195 CDS YP_001209385.1 146329597 5122766 complement(508788..509432) 1 NC_009446.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 509432 ribE 5122766 ribE Dichelobacter nodosus VCS1703A riboflavin synthase subunit alpha YP_001209385.1 508788 R 246195 CDS YP_001209386.1 146329385 5122998 complement(509447..510553) 1 NC_009446.1 identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 510553 ribD 5122998 ribD Dichelobacter nodosus VCS1703A riboflavin biosynthesis protein RibD YP_001209386.1 509447 R 246195 CDS YP_001209387.1 146328632 5123002 complement(510525..510992) 1 NC_009446.1 identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; hypothetical protein 510992 nrdR 5123002 nrdR Dichelobacter nodosus VCS1703A hypothetical protein YP_001209387.1 510525 R 246195 CDS YP_001209388.1 146329201 5122420 complement(511008..512261) 1 NC_009446.1 identified by match to protein family HMM PF00464; serine hydroxymethyltransferase 512261 glyA 5122420 glyA Dichelobacter nodosus VCS1703A serine hydroxymethyltransferase YP_001209388.1 511008 R 246195 CDS YP_001209389.1 146328794 5122261 512440..513213 1 NC_009446.1 identified by match to protein family HMM PF02616; hypothetical protein 513213 scpA 5122261 scpA Dichelobacter nodosus VCS1703A hypothetical protein YP_001209389.1 512440 D 246195 CDS YP_001209390.1 146329487 5123453 513210..513752 1 NC_009446.1 identified by match to protein family HMM PF04079; hypothetical protein 513752 5123453 DNO_0478 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209390.1 513210 D 246195 CDS YP_001209391.1 146329607 5122707 513736..514536 1 NC_009446.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase, RluB 514536 rluB 5122707 rluB Dichelobacter nodosus VCS1703A ribosomal large subunit pseudouridine synthase, RluB YP_001209391.1 513736 D 246195 CDS YP_001209392.1 146328775 5122219 514640..515614 1 NC_009446.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 515614 lipA 5122219 lipA Dichelobacter nodosus VCS1703A lipoyl synthase YP_001209392.1 514640 D 246195 CDS YP_001209393.1 146328721 5122132 515646..516359 1 NC_009446.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR00740; methyltransferase family protein 516359 5122132 DNO_0481 Dichelobacter nodosus VCS1703A methyltransferase family protein YP_001209393.1 515646 D 246195 CDS YP_001209394.1 146329308 5123194 516356..517294 1 NC_009446.1 identified by match to protein family HMM PF08003; match to protein family HMM PF08242; methyltransferase family protein 517294 5123194 DNO_0482 Dichelobacter nodosus VCS1703A methyltransferase family protein YP_001209394.1 516356 D 246195 CDS YP_001209395.1 146329556 5123318 517398..520109 1 NC_009446.1 identified by match to protein family HMM PF01580; cell division protein, FtsK 520109 ftsK 5123318 ftsK Dichelobacter nodosus VCS1703A cell division protein, FtsK YP_001209395.1 517398 D 246195 CDS YP_001209396.1 146328695 5123382 520123..520815 1 NC_009446.1 identified by match to protein family HMM PF03548; LolA family outer membrane lipoprotein carrier protein 520815 5123382 DNO_0484 Dichelobacter nodosus VCS1703A LolA family outer membrane lipoprotein carrier protein YP_001209396.1 520123 D 246195 CDS YP_001209397.1 146328648 5123153 520818..522107 1 NC_009446.1 identified by match to protein family HMM PF00004; recombination factor protein RarA 522107 5123153 DNO_0485 Dichelobacter nodosus VCS1703A recombination factor protein RarA YP_001209397.1 520818 D 246195 CDS YP_001209398.1 146329502 5123064 522182..522502 1 NC_009446.1 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 522502 rplU 5123064 rplU Dichelobacter nodosus VCS1703A 50S ribosomal protein L21 YP_001209398.1 522182 D 246195 CDS YP_001209399.1 146329324 5122732 522515..522778 1 NC_009446.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 522778 rpmA 5122732 rpmA Dichelobacter nodosus VCS1703A 50S ribosomal protein L27 YP_001209399.1 522515 D 246195 CDS YP_001209400.1 146328972 5122675 522842..523903 1 NC_009446.1 identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM TIGR02729; GTP binding domain-containing protein 523903 5122675 DNO_0488 Dichelobacter nodosus VCS1703A GTP binding domain-containing protein YP_001209400.1 522842 D 246195 CDS YP_001209401.1 146329469 5123207 complement(523924..524835) 1 NC_009446.1 identified by match to protein family HMM PF00288; GHMP kinase family protein 524835 5123207 DNO_0489 Dichelobacter nodosus VCS1703A GHMP kinase family protein YP_001209401.1 523924 R 246195 CDS YP_001209402.1 146329825 5122760 complement(524911..525957) 1 NC_009446.1 identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase 525957 pyrB 5122760 pyrB Dichelobacter nodosus VCS1703A aspartate carbamoyltransferase YP_001209402.1 524911 R 246195 CDS YP_001209403.1 146329386 5122351 526175..526612 1 NC_009446.1 identified by match to protein family HMM PF02580; match to protein family HMM TIGR00256; D-tyrosyl-tRNA deacylase 526612 dtd 5122351 dtd Dichelobacter nodosus VCS1703A D-tyrosyl-tRNA deacylase YP_001209403.1 526175 D 246195 CDS YP_001209404.1 146328973 5122386 526609..527232 1 NC_009446.1 identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; Maf-like protein 527232 maf-1 5122386 maf-1 Dichelobacter nodosus VCS1703A Maf-like protein YP_001209404.1 526609 D 246195 CDS YP_001209405.1 146329834 5122148 527249..528739 1 NC_009446.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease g 528739 rng 5122148 rng Dichelobacter nodosus VCS1703A ribonuclease g YP_001209405.1 527249 D 246195 CDS YP_001209406.1 146329573 5122211 528896..530026 1 NC_009446.1 identified by match to protein family HMM PF00267; porin family protein 530026 5122211 DNO_0494 Dichelobacter nodosus VCS1703A porin family protein YP_001209406.1 528896 D 246195 CDS YP_001209407.1 146328859 5122388 530286..531263 1 NC_009446.1 identified by match to protein family HMM PF00267; match to protein family HMM TIGR03304; porin family protein 531263 5122388 DNO_0495 Dichelobacter nodosus VCS1703A porin family protein YP_001209407.1 530286 D 246195 CDS YP_001209408.1 146328635 5122584 complement(531324..531890) 1 NC_009446.1 lipoprotein 531890 5122584 DNO_0496 Dichelobacter nodosus VCS1703A lipoprotein YP_001209408.1 531324 R 246195 CDS YP_001209409.1 146329266 5122517 complement(531893..533512) 1 NC_009446.1 identified by match to protein family HMM PF02470; paraquat-inducible B family protein 533512 5122517 DNO_0497 Dichelobacter nodosus VCS1703A paraquat-inducible B family protein YP_001209409.1 531893 R 246195 CDS YP_001209410.1 146329560 5123108 complement(534772..535437) 1 NC_009446.1 identified by match to protein family HMM PF01027; hypothetical protein 535437 5123108 DNO_0499 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209410.1 534772 R 246195 CDS YP_001209411.1 146329355 5122836 535588..536544 1 NC_009446.1 hypothetical protein 536544 5122836 DNO_0500 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209411.1 535588 D 246195 CDS YP_001209412.1 146329163 5122306 536633..538228 1 NC_009446.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 538228 prfC 5122306 prfC Dichelobacter nodosus VCS1703A peptide chain release factor 3 YP_001209412.1 536633 D 246195 CDS YP_001209413.1 146329621 5122310 538366..539127 1 NC_009446.1 identified by match to protein family HMM PF00497; extracellular solute-binding family protein 539127 5122310 DNO_0502 Dichelobacter nodosus VCS1703A extracellular solute-binding family protein YP_001209413.1 538366 D 246195 CDS YP_001209414.1 146329404 5123268 539263..540021 1 NC_009446.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase family protein 540021 5123268 DNO_0503 Dichelobacter nodosus VCS1703A short chain dehydrogenase family protein YP_001209414.1 539263 D 246195 CDS YP_001209415.1 146329432 5122263 540031..541434 1 NC_009446.1 identified by match to protein family HMM PF07690; drug resistance transporter 541434 5122263 DNO_0505 Dichelobacter nodosus VCS1703A drug resistance transporter YP_001209415.1 540031 D 246195 CDS YP_001209416.1 146329706 5122627 complement(541361..542347) 1 NC_009446.1 identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR01240; diphosphomevalonate decarboxylase 542347 mvaD 5122627 mvaD Dichelobacter nodosus VCS1703A diphosphomevalonate decarboxylase YP_001209416.1 541361 R 246195 CDS YP_001209417.1 146329846 5122826 complement(542356..543741) 1 NC_009446.1 identified by match to protein family HMM PF00206; match to protein family HMM TIGR00979; class II fumarate hydratase 543741 fumC 5122826 fumC Dichelobacter nodosus VCS1703A class II fumarate hydratase YP_001209417.1 542356 R 246195 CDS YP_001209418.1 146329182 5123056 complement(543789..544355) 1 NC_009446.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 544355 dcd 5123056 dcd Dichelobacter nodosus VCS1703A deoxycytidine triphosphate deaminase YP_001209418.1 543789 R 246195 CDS YP_001209419.1 146329330 5122505 complement(544380..545417) 1 NC_009446.1 ATPase family protein 545417 5122505 DNO_0508 Dichelobacter nodosus VCS1703A ATPase family protein YP_001209419.1 544380 R 246195 CDS YP_001209420.1 146328967 5123181 complement(545431..546213) 1 NC_009446.1 identified by match to protein family HMM PF01488; match to protein family HMM PF08501; shhikimate 5-dehydrogenase 546213 aroE 5123181 aroE Dichelobacter nodosus VCS1703A shhikimate 5-dehydrogenase YP_001209420.1 545431 R 246195 CDS YP_001209421.1 146329547 5122672 complement(546210..547220) 1 NC_009446.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 547220 hemB 5122672 hemB Dichelobacter nodosus VCS1703A delta-aminolevulinic acid dehydratase YP_001209421.1 546210 R 246195 CDS YP_001209422.1 146329418 5122625 547347..547958 1 NC_009446.1 identified by match to protein family HMM PF01323; thiol:disulfide interchange protein DsbA 547958 dsbA 5122625 dsbA Dichelobacter nodosus VCS1703A thiol:disulfide interchange protein DsbA YP_001209422.1 547347 D 246195 CDS YP_001209423.1 146328762 5122521 547958..548965 1 NC_009446.1 identified by match to protein family HMM PF01636; hypothetical protein 548965 5122521 DNO_0512 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209423.1 547958 D 246195 CDS YP_001209424.1 146329546 5123167 548931..549608 1 NC_009446.1 identified by match to protein family HMM PF00483; match to protein family HMM PF01128; nucleotidyl transferase family protein 549608 5123167 DNO_0513 Dichelobacter nodosus VCS1703A nucleotidyl transferase family protein YP_001209424.1 548931 D 246195 CDS YP_001209425.1 146329686 5122636 549745..550839 1 NC_009446.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; hypothetical protein 550839 5122636 DNO_0514 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209425.1 549745 D 246195 CDS YP_001209426.1 146329909 5122384 550931..551692 1 NC_009446.1 identified by match to protein family HMM PF00515; type 4 fimbrial biogenesis protein 551692 5122384 DNO_0515 Dichelobacter nodosus VCS1703A type 4 fimbrial biogenesis protein YP_001209426.1 550931 D 246195 CDS YP_001209427.1 146329384 5122930 551694..552674 1 NC_009446.1 hypothetical protein 552674 5122930 DNO_0516 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209427.1 551694 D 246195 CDS YP_001209428.1 146329531 5122510 552671..553951 1 NC_009446.1 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidyl-tRNA synthetase 553951 hisS 5122510 hisS Dichelobacter nodosus VCS1703A histidyl-tRNA synthetase YP_001209428.1 552671 D 246195 CDS YP_001209429.1 146328662 5122613 553942..554616 1 NC_009446.1 hypothetical protein 554616 5122613 DNO_0518 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209429.1 553942 D 246195 CDS YP_001209430.1 146328976 5122553 554613..555758 1 NC_009446.1 quinonprotein alcohol dehydrogenase family protein 555758 5122553 DNO_0519 Dichelobacter nodosus VCS1703A quinonprotein alcohol dehydrogenase family protein YP_001209430.1 554613 D 246195 CDS YP_001209431.1 146328838 5122493 555768..557117 1 NC_009446.1 identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650; GTP-binding family protein 557117 engA 5122493 engA Dichelobacter nodosus VCS1703A GTP-binding family protein YP_001209431.1 555768 D 246195 CDS YP_001209432.1 146329894 5123459 complement(557159..558382) 1 NC_009446.1 identified by match to protein family HMM PF05684; hypothetical protein 558382 5123459 DNO_0521 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209432.1 557159 R 246195 CDS YP_001209433.1 146328682 5123220 558488..559144 1 NC_009446.1 identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase 559144 rpiA 5123220 rpiA Dichelobacter nodosus VCS1703A ribose 5-phosphate isomerase YP_001209433.1 558488 D 246195 CDS YP_001209434.1 146328831 5123128 complement(559147..559383) 1 NC_009446.1 identified by match to protein family HMM PF03937; hypothetical protein 559383 5123128 DNO_0523 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209434.1 559147 R 246195 CDS YP_001209435.1 146328998 5123424 complement(559452..559811) 1 NC_009446.1 identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032; 50S ribosomal protein L20 559811 rplT 5123424 rplT Dichelobacter nodosus VCS1703A 50S ribosomal protein L20 YP_001209435.1 559452 R 246195 CDS YP_001209436.1 146329780 5122776 complement(559823..560062) 1 NC_009446.1 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 560062 rpmI 5122776 rpmI Dichelobacter nodosus VCS1703A 50S ribosomal protein L35 YP_001209436.1 559823 R 246195 CDS YP_001209437.1 146328703 5122480 complement(560604..562526) 1 NC_009446.1 identified by match to protein family HMM PF00587; match to protein family HMM PF02824; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonyl-tRNA synthetase 562526 thrS 5122480 thrS Dichelobacter nodosus VCS1703A threonyl-tRNA synthetase YP_001209437.1 560604 R 246195 CDS YP_001209438.1 146329300 5122366 562630..564447 1 NC_009446.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glucosamine-fructose-6-phosphate aminotransferase 564447 glmS 5122366 glmS Dichelobacter nodosus VCS1703A glucosamine-fructose-6-phosphate aminotransferase YP_001209438.1 562630 D 246195 CDS YP_001209439.1 146328888 5123006 complement(564498..565181) 1 NC_009446.1 hypothetical protein 565181 5123006 DNO_0529 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209439.1 564498 R 246195 CDS YP_001209440.1 146329719 5122581 complement(565171..566790) 1 NC_009446.1 identified by match to protein family HMM PF00884; match to protein family HMM PF08019; sulfatase 566790 5122581 DNO_0530 Dichelobacter nodosus VCS1703A sulfatase YP_001209440.1 565171 R 246195 CDS YP_001209441.1 146329583 5122827 567127..567891 1 NC_009446.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short-chain dehydrogenase/reductase family protein 567891 5122827 DNO_0531 Dichelobacter nodosus VCS1703A short-chain dehydrogenase/reductase family protein YP_001209441.1 567127 D 246195 CDS YP_001209442.1 146329841 5123156 complement(567956..569365) 1 NC_009446.1 identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395; RNA polymerase sigma-54 factor 569365 rpoN 5123156 rpoN Dichelobacter nodosus VCS1703A RNA polymerase sigma-54 factor YP_001209442.1 567956 R 246195 CDS YP_001209443.1 146328708 5122899 complement(569367..570098) 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 570098 5122899 DNO_0533 Dichelobacter nodosus VCS1703A ABC transporter ATP-binding protein YP_001209443.1 569367 R 246195 CDS YP_001209444.1 146329290 5122406 complement(570095..570550) 1 NC_009446.1 identified by match to protein family HMM PF03968; match to protein family HMM TIGR03002; OstA-like family protein 570550 5122406 DNO_0534 Dichelobacter nodosus VCS1703A OstA-like family protein YP_001209444.1 570095 R 246195 CDS YP_001209445.1 146328713 5122365 complement(570492..571064) 1 NC_009446.1 hypothetical protein 571064 5122365 DNO_0535 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209445.1 570492 R 246195 CDS YP_001209446.1 146329517 5122206 complement(571094..572056) 1 NC_009446.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; arabinose 5-phosphate isomerase 572056 5122206 DNO_0536 Dichelobacter nodosus VCS1703A arabinose 5-phosphate isomerase YP_001209446.1 571094 R 246195 CDS YP_001209447.1 146328801 5122528 complement(572081..572755) 1 NC_009446.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase 572755 gph 5122528 gph Dichelobacter nodosus VCS1703A phosphoglycolate phosphatase YP_001209447.1 572081 R 246195 CDS YP_001209448.1 146329417 5123444 complement(572752..573447) 1 NC_009446.1 identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01983; ubiquinone biosynthesis O-methyltransferase 573447 ubiG 5123444 ubiG Dichelobacter nodosus VCS1703A ubiquinone biosynthesis O-methyltransferase YP_001209448.1 572752 R 246195 CDS YP_001209449.1 146328832 5123391 complement(573502..574662) 1 NC_009446.1 hypothetical protein 574662 5123391 DNO_0539 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209449.1 573502 R 246195 CDS YP_001209450.1 146329629 5123433 complement(574740..575429) 1 NC_009446.1 identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 575429 rpe 5123433 rpe Dichelobacter nodosus VCS1703A ribulose-phosphate 3-epimerase YP_001209450.1 574740 R 246195 CDS YP_001209451.1 146329744 5122319 575457..576203 1 NC_009446.1 identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin--acetyl-CoA-carboxylase ligase 576203 birA 5122319 birA Dichelobacter nodosus VCS1703A biotin--acetyl-CoA-carboxylase ligase YP_001209451.1 575457 D 246195 CDS YP_001209452.1 146329188 5123359 576191..576931 1 NC_009446.1 identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671; bvg accessory factor family protein 576931 5123359 DNO_0542 Dichelobacter nodosus VCS1703A bvg accessory factor family protein YP_001209452.1 576191 D 246195 CDS YP_001209453.1 146329289 5123118 complement(576935..578245) 1 NC_009446.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease family protein 578245 5123118 DNO_0543 Dichelobacter nodosus VCS1703A carboxyl-terminal protease family protein YP_001209453.1 576935 R 246195 CDS YP_001209454.1 146329555 5122363 578842..581490 1 NC_009446.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 581490 aceE 5122363 aceE Dichelobacter nodosus VCS1703A pyruvate dehydrogenase subunit E1 YP_001209454.1 578842 D 246195 CDS YP_001209455.1 146328797 5122213 581471..582739 1 NC_009446.1 identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 582739 aceF 5122213 aceF Dichelobacter nodosus VCS1703A dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex YP_001209455.1 581471 D 246195 CDS YP_001209456.1 146329718 5123449 582782..584467 1 NC_009446.1 identified by match to protein family HMM PF02321; outer membrane efflux family protein 584467 5123449 DNO_0546 Dichelobacter nodosus VCS1703A outer membrane efflux family protein YP_001209456.1 582782 D 246195 CDS YP_001209457.1 146329899 5122980 584537..586753 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR03375; ABC transporter family protein 586753 5122980 DNO_0547 Dichelobacter nodosus VCS1703A ABC transporter family protein YP_001209457.1 584537 D 246195 CDS YP_001209458.1 146329021 5122163 586763..588028 1 NC_009446.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843; type I secretion membrane fusion protein 588028 5122163 DNO_0549 Dichelobacter nodosus VCS1703A type I secretion membrane fusion protein YP_001209458.1 586763 D 246195 CDS YP_001209459.1 146329871 5122729 complement(588014..588643) 1 NC_009446.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 588643 nth 5122729 nth Dichelobacter nodosus VCS1703A endonuclease III YP_001209459.1 588014 R 246195 CDS YP_001209460.1 146328958 5123132 complement(588640..589281) 1 NC_009446.1 identified by match to protein family HMM PF02508; match to protein family HMM TIGR01948; electron transport complex protein subunit E 589281 rnfE 5123132 rnfE Dichelobacter nodosus VCS1703A electron transport complex protein subunit E YP_001209460.1 588640 R 246195 CDS YP_001209461.1 146329343 5122554 complement(589271..589852) 1 NC_009446.1 identified by match to protein family HMM PF04205; match to protein family HMM TIGR01947; electron transport complex protein subunit G 589852 rnfG 5122554 rnfG Dichelobacter nodosus VCS1703A electron transport complex protein subunit G YP_001209461.1 589271 R 246195 CDS YP_001209462.1 146329508 5123140 complement(589859..590812) 1 NC_009446.1 identified by match to protein family HMM PF03116; match to protein family HMM TIGR01946; electron transport complex protein subunit D 590812 rnfD 5123140 rnfD Dichelobacter nodosus VCS1703A electron transport complex protein subunit D YP_001209462.1 589859 R 246195 CDS YP_001209463.1 146329069 5122150 complement(590809..592416) 1 NC_009446.1 identified by match to protein family HMM PF00037; match to protein family HMM PF01512; match to protein family HMM TIGR01945; electron transport complex protein subunit C 592416 rnfC 5122150 rnfC Dichelobacter nodosus VCS1703A electron transport complex protein subunit C YP_001209463.1 590809 R 246195 CDS YP_001209464.1 146329455 5122179 complement(592403..592972) 1 NC_009446.1 identified by match to protein family HMM PF00037; match to protein family HMM PF04060; match to protein family HMM TIGR01944; electron transport complex protein subunit B 592972 rnfB 5122179 rnfB Dichelobacter nodosus VCS1703A electron transport complex protein subunit B YP_001209464.1 592403 R 246195 CDS YP_001209465.1 146329226 5122740 complement(592969..593601) 1 NC_009446.1 identified by match to protein family HMM PF02508; match to protein family HMM TIGR01943; electron transport complex protein subunit A 593601 rnfA 5122740 rnfA Dichelobacter nodosus VCS1703A electron transport complex protein subunit A YP_001209465.1 592969 R 246195 CDS YP_001209466.1 146328720 5123008 593673..594317 1 NC_009446.1 lipoprotein 594317 5123008 DNO_0556 Dichelobacter nodosus VCS1703A lipoprotein YP_001209466.1 593673 D 246195 CDS YP_001209467.1 146328680 5123159 594314..594778 1 NC_009446.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; alkyl hydroperoxide reductase/thiol specific antioxidant family protein 594778 5123159 DNO_0557 Dichelobacter nodosus VCS1703A alkyl hydroperoxide reductase/thiol specific antioxidant family protein YP_001209467.1 594314 D 246195 CDS YP_001209468.1 146329703 5123053 594794..596803 1 NC_009446.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 596803 uvrB 5123053 uvrB Dichelobacter nodosus VCS1703A excinuclease ABC subunit B YP_001209468.1 594794 D 246195 CDS YP_001209469.1 146328989 5122287 596834..598687 1 NC_009446.1 identified by match to protein family HMM PF01501; glycosyl transferase family protein 598687 5122287 DNO_0559 Dichelobacter nodosus VCS1703A glycosyl transferase family protein YP_001209469.1 596834 D 246195 CDS YP_001209470.1 146329171 5122695 complement(598691..599194) 1 NC_009446.1 hypothetical protein 599194 5122695 DNO_0560 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209470.1 598691 R 246195 CDS YP_001209471.1 146329390 5123034 599224..600048 1 NC_009446.1 identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase 600048 dapB 5123034 dapB Dichelobacter nodosus VCS1703A dihydrodipicolinate reductase YP_001209471.1 599224 D 246195 CDS YP_001209472.1 146329522 5122238 600118..600474 1 NC_009446.1 hypothetical protein 600474 5122238 DNO_0562 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209472.1 600118 D 246195 CDS YP_001209473.1 146329322 5122545 600475..601620 1 NC_009446.1 tetratricopeptide repeat protein 601620 5122545 DNO_0563 Dichelobacter nodosus VCS1703A tetratricopeptide repeat protein YP_001209473.1 600475 D 246195 CDS YP_001209474.1 146329125 5123098 601617..602306 1 NC_009446.1 identified by match to protein family HMM PF00215; match to protein family HMM TIGR01740; orotidine 5'-phosphate decarboxylase 602306 pyrF 5123098 pyrF Dichelobacter nodosus VCS1703A orotidine 5'-phosphate decarboxylase YP_001209474.1 601617 D 246195 CDS YP_001209475.1 146329701 5122984 602316..603053 1 NC_009446.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase 603053 pssA 5122984 pssA Dichelobacter nodosus VCS1703A CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001209475.1 602316 D 246195 CDS YP_001209476.1 146329731 5122158 603046..603726 1 NC_009446.1 hypothetical protein 603726 5122158 DNO_0566 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209476.1 603046 D 246195 CDS YP_001209477.1 146329002 5123372 603728..604396 1 NC_009446.1 identified by match to protein family HMM PF08239; hypothetical protein 604396 5123372 DNO_0567 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209477.1 603728 D 246195 CDS YP_001209478.1 146329434 5122807 604430..605218 1 NC_009446.1 identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 605218 lgt 5122807 lgt Dichelobacter nodosus VCS1703A prolipoprotein diacylglyceryl transferase YP_001209478.1 604430 D 246195 CDS YP_001209479.1 146329360 5122897 605226..606002 1 NC_009446.1 identified by match to protein family HMM PF00303; thymidylate synthase 606002 thyA 5122897 thyA Dichelobacter nodosus VCS1703A thymidylate synthase YP_001209479.1 605226 D 246195 CDS YP_001209480.1 146328739 5122313 606019..608394 1 NC_009446.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02071; penicillin-binding protein 1B 608394 5122313 DNO_0570 Dichelobacter nodosus VCS1703A penicillin-binding protein 1B YP_001209480.1 606019 D 246195 CDS YP_001209481.1 146329475 5122325 608477..609364 1 NC_009446.1 identified by match to protein family HMM PF00515; hypothetical protein 609364 5122325 DNO_0571 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209481.1 608477 D 246195 CDS YP_001209482.1 146329523 5122631 609374..611311 1 NC_009446.1 helicase domain-containing protein 611311 5122631 DNO_0572 Dichelobacter nodosus VCS1703A helicase domain-containing protein YP_001209482.1 609374 D 246195 CDS YP_001209483.1 146329590 5122502 611298..611957 1 NC_009446.1 identified by match to protein family HMM PF00814; glycoprotease family protein 611957 5122502 DNO_0573 Dichelobacter nodosus VCS1703A glycoprotease family protein YP_001209483.1 611298 D 246195 CDS YP_001209484.1 146329058 5123000 611954..612355 1 NC_009446.1 thioesterase family protein 612355 5123000 DNO_0574 Dichelobacter nodosus VCS1703A thioesterase family protein YP_001209484.1 611954 D 246195 CDS YP_001209485.1 146329812 5122207 612359..613843 1 NC_009446.1 identified by match to protein family HMM PF01926; hypothetical protein 613843 5122207 DNO_0575 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209485.1 612359 D 246195 CDS YP_001209486.1 146329223 5123322 613737..615125 1 NC_009446.1 identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; hypothetical protein 615125 5123322 DNO_0576 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209486.1 613737 D 246195 CDS YP_001209487.1 146329210 5122236 615118..616542 1 NC_009446.1 identified by match to protein family HMM PF01523; TldD protein 616542 tldD 5122236 tldD Dichelobacter nodosus VCS1703A TldD protein YP_001209487.1 615118 D 246195 CDS YP_001209488.1 146329830 5123029 616535..617878 1 NC_009446.1 identified by match to protein family HMM PF01523; PmbA protein 617878 5123029 DNO_0578 Dichelobacter nodosus VCS1703A PmbA protein YP_001209488.1 616535 D 246195 CDS YP_001209489.1 146329465 5122482 617871..618344 1 NC_009446.1 identified by match to protein family HMM PF00383; adenosine deaminase 618344 tadA 5122482 tadA Dichelobacter nodosus VCS1703A adenosine deaminase YP_001209489.1 617871 D 246195 CDS YP_001209490.1 146328661 5122316 618337..618708 1 NC_009446.1 putative lipoprotein 618708 5122316 DNO_0580 Dichelobacter nodosus VCS1703A putative lipoprotein YP_001209490.1 618337 D 246195 CDS YP_001209491.1 146328870 5122171 618719..620428 1 NC_009446.1 identified by match to protein family HMM PF02254; TrkA domain-containing protein 620428 5122171 DNO_0581 Dichelobacter nodosus VCS1703A TrkA domain-containing protein YP_001209491.1 618719 D 246195 CDS YP_001209492.1 146329814 5123311 620439..621188 1 NC_009446.1 identified by match to protein family HMM PF00561; hydrolase 621188 5123311 DNO_0582 Dichelobacter nodosus VCS1703A hydrolase YP_001209492.1 620439 D 246195 CDS YP_001209493.1 146329440 5123393 621204..622151 1 NC_009446.1 identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; 1-phosphofructokinase 622151 5123393 DNO_0583 Dichelobacter nodosus VCS1703A 1-phosphofructokinase YP_001209493.1 621204 D 246195 CDS YP_001209494.1 146329452 5123187 622151..622720 1 NC_009446.1 identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase, RluE 622720 rluE 5123187 rluE Dichelobacter nodosus VCS1703A ribosomal large subunit pseudouridine synthase, RluE YP_001209494.1 622151 D 246195 CDS YP_001209495.1 146328913 5122413 622906..623709 1 NC_009446.1 identified by match to protein family HMM PF00218; indole-3-glycerol phosphate synthase 623709 trpC 5122413 trpC Dichelobacter nodosus VCS1703A indole-3-glycerol phosphate synthase YP_001209495.1 622906 D 246195 CDS YP_001209496.1 146329498 5122756 623711..624343 1 NC_009446.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 624343 upp 5122756 upp Dichelobacter nodosus VCS1703A uracil phosphoribosyltransferase YP_001209496.1 623711 D 246195 CDS YP_001209497.1 146329662 5122400 624330..625028 1 NC_009446.1 hypothetical protein 625028 5122400 DNO_0587 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209497.1 624330 D 246195 CDS YP_001209498.1 146329079 5122538 625025..625954 1 NC_009446.1 hypothetical protein 625954 5122538 DNO_0588 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209498.1 625025 D 246195 CDS YP_001209499.1 146329793 5123223 626025..627377 1 NC_009446.1 hypothetical protein 627377 5123223 DNO_0589 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209499.1 626025 D 246195 CDS YP_001209500.1 146328795 5122457 627425..628339 1 NC_009446.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238; lysine 2,3-aminomutase 628339 kamA 5122457 kamA Dichelobacter nodosus VCS1703A lysine 2,3-aminomutase YP_001209500.1 627425 D 246195 CDS YP_001209501.1 146329653 5123452 628336..630006 1 NC_009446.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; DNA exonuclease RecJ 630006 recJ 5123452 recJ Dichelobacter nodosus VCS1703A DNA exonuclease RecJ YP_001209501.1 628336 D 246195 CDS YP_001209502.1 146328787 5122558 complement(630003..630212) 1 NC_009446.1 hypothetical protein 630212 5122558 DNO_0591 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209502.1 630003 R 246195 CDS YP_001209503.1 146329818 5123461 complement(630212..631027) 1 NC_009446.1 identified by match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; haloacid dehalogenase family protein 631027 5123461 DNO_0593 Dichelobacter nodosus VCS1703A haloacid dehalogenase family protein YP_001209503.1 630212 R 246195 CDS YP_001209504.1 146328970 5122821 complement(631011..631262) 1 NC_009446.1 hypothetical protein 631262 5122821 DNO_0594 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209504.1 631011 R 246195 CDS YP_001209505.1 146328683 5123325 631250..631570 1 NC_009446.1 identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383; Hfq RNA-binding protein 631570 hfq 5123325 hfq Dichelobacter nodosus VCS1703A Hfq RNA-binding protein YP_001209505.1 631250 D 246195 CDS YP_001209506.1 146329152 5123133 631650..632936 1 NC_009446.1 identified by match to protein family HMM PF01926; match to protein family HMM TIGR03156; GTP-binding protein HflX 632936 hflX 5123133 hflX Dichelobacter nodosus VCS1703A GTP-binding protein HflX YP_001209506.1 631650 D 246195 CDS YP_001209507.1 146328833 5122431 632956..634233 1 NC_009446.1 identified by match to protein family HMM PF01145; match to protein family HMM TIGR01933; HflK protein 634233 hflK 5122431 hflK Dichelobacter nodosus VCS1703A HflK protein YP_001209507.1 632956 D 246195 CDS YP_001209508.1 146329647 5123436 634236..635174 1 NC_009446.1 identified by match to protein family HMM PF01145; match to protein family HMM TIGR01932; HflC protein 635174 hflC 5123436 hflC Dichelobacter nodosus VCS1703A HflC protein YP_001209508.1 634236 D 246195 CDS YP_001209509.1 146328759 5122193 635182..635394 1 NC_009446.1 hypothetical protein 635394 5122193 DNO_0599 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209509.1 635182 D 246195 CDS YP_001209510.1 146328709 5123183 635412..636698 1 NC_009446.1 identified by match to protein family HMM PF00709; match to protein family HMM TIGR00184; adenylosuccinate synthetase 636698 purA 5123183 purA Dichelobacter nodosus VCS1703A adenylosuccinate synthetase YP_001209510.1 635412 D 246195 CDS YP_001209511.1 146329242 5123171 636742..639000 1 NC_009446.1 identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 639000 5123171 DNO_0601 Dichelobacter nodosus VCS1703A ribonuclease R YP_001209511.1 636742 D 246195 CDS YP_001209512.1 146329073 5123289 638997..639725 1 NC_009446.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase 639725 trmH 5123289 trmH Dichelobacter nodosus VCS1703A RNA methyltransferase YP_001209512.1 638997 D 246195 CDS YP_001209513.1 146329219 5122149 639978..641765 1 NC_009446.1 identified by match to protein family HMM PF00082; match to protein family HMM PF01483; acidic extracellular subtilisin-like protease AprV5 641765 aprV5 5122149 aprV5 Dichelobacter nodosus VCS1703A acidic extracellular subtilisin-like protease AprV5 YP_001209513.1 639978 D 246195 CDS YP_001209514.1 146329769 5122918 641844..642755 1 NC_009446.1 identified by match to protein family HMM PF00152; lysyl-RNA synthetase 642755 5122918 DNO_0604 Dichelobacter nodosus VCS1703A lysyl-RNA synthetase YP_001209514.1 641844 D 246195 CDS YP_001209515.1 146328668 5123334 642978..644789 1 NC_009446.1 identified by match to protein family HMM PF00082; match to protein family HMM PF01483; basic extracellular subtilisin-like protease BprV 644789 bprV 5123334 bprV Dichelobacter nodosus VCS1703A basic extracellular subtilisin-like protease BprV YP_001209515.1 642978 D 246195 CDS YP_001209516.1 146329577 5123010 645027..645761 1 NC_009446.1 identified by match to protein family HMM PF00497; extracellular solute-binding family protein 645761 5123010 DNO_0606 Dichelobacter nodosus VCS1703A extracellular solute-binding family protein YP_001209516.1 645027 D 246195 CDS YP_001209517.1 146329736 5123059 complement(645819..647540) 1 NC_009446.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 647540 nrdA 5123059 nrdA Dichelobacter nodosus VCS1703A ribonucleotide-diphosphate reductase subunit alpha YP_001209517.1 645819 R 246195 CDS YP_001209518.1 146329200 5123367 complement(647467..648444) 1 NC_009446.1 identified by match to protein family HMM PF00268; ribonucleotide reductase subunit beta 648444 5123367 DNO_0608 Dichelobacter nodosus VCS1703A ribonucleotide reductase subunit beta YP_001209518.1 647467 R 246195 CDS YP_001209519.1 146329776 5122202 complement(648605..651988) 1 NC_009446.1 identified by match to protein family HMM PF02463; chromosome segregation SMC family protein 651988 5122202 DNO_0609 Dichelobacter nodosus VCS1703A chromosome segregation SMC family protein YP_001209519.1 648605 R 246195 CDS YP_001209520.1 146329391 5123314 652129..653973 1 NC_009446.1 identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR01427; PTS system, fructose IIC subunit 653973 5123314 DNO_0610 Dichelobacter nodosus VCS1703A PTS system, fructose IIC subunit YP_001209520.1 652129 D 246195 CDS YP_001209521.1 146329261 5122275 653989..654525 1 NC_009446.1 identified by match to protein family HMM PF01202; shikimate kinase I 654525 aroK 5122275 aroK Dichelobacter nodosus VCS1703A shikimate kinase I YP_001209521.1 653989 D 246195 CDS YP_001209522.1 146328853 5122810 complement(654560..656962) 1 NC_009446.1 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 656962 gyrB 5122810 gyrB Dichelobacter nodosus VCS1703A DNA gyrase subunit B YP_001209522.1 654560 R 246195 CDS YP_001209523.1 146329587 5122269 657445..657735 1 NC_009446.1 identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; sigma-54 modulation protein/S30EA ribosomal family protein 657735 yfiA 5122269 yfiA Dichelobacter nodosus VCS1703A sigma-54 modulation protein/S30EA ribosomal family protein YP_001209523.1 657445 D 246195 CDS YP_001209524.1 146329646 5123178 657873..658109 1 NC_009446.1 lipoprotein 658109 5123178 DNO_0615 Dichelobacter nodosus VCS1703A lipoprotein YP_001209524.1 657873 D 246195 CDS YP_001209525.1 146329857 5123295 658111..658548 1 NC_009446.1 hypothetical protein 658548 5123295 DNO_0616 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209525.1 658111 D 246195 CDS YP_001209526.1 146329886 5123042 658568..659080 1 NC_009446.1 hypothetical protein 659080 5123042 DNO_0617 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209526.1 658568 D 246195 CDS YP_001209527.1 146329628 5122338 659243..660520 1 NC_009446.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; NADH dehydrogenase 660520 ndh 5122338 ndh Dichelobacter nodosus VCS1703A NADH dehydrogenase YP_001209527.1 659243 D 246195 CDS YP_001209528.1 146328925 5122235 660877..662247 1 NC_009446.1 identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine dehydratase 662247 sdaA 5122235 sdaA Dichelobacter nodosus VCS1703A L-serine dehydratase YP_001209528.1 660877 D 246195 CDS YP_001209529.1 146329797 5122725 662341..662532 1 NC_009446.1 hypothetical protein 662532 5122725 DNO_0620 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209529.1 662341 D 246195 CDS YP_001209530.1 146329083 5122461 662544..662711 1 NC_009446.1 hypothetical protein 662711 5122461 DNO_0621 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209530.1 662544 D 246195 CDS YP_001209531.1 146328724 5122954 662704..666612 1 NC_009446.1 identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967; ATP-dependent helicase HrpA 666612 hrpA 5122954 hrpA Dichelobacter nodosus VCS1703A ATP-dependent helicase HrpA YP_001209531.1 662704 D 246195 CDS YP_001209532.1 146329309 5122926 666609..666794 1 NC_009446.1 lipoprotein 666794 5122926 DNO_0623 Dichelobacter nodosus VCS1703A lipoprotein YP_001209532.1 666609 D 246195 CDS YP_001209533.1 146328780 5122872 666804..667493 1 NC_009446.1 identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA-SAH nucleosidase 667493 pfs 5122872 pfs Dichelobacter nodosus VCS1703A MTA-SAH nucleosidase YP_001209533.1 666804 D 246195 CDS YP_001209534.1 146328952 5123471 667619..669169 1 NC_009446.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 669169 mdoG 5123471 mdoG Dichelobacter nodosus VCS1703A glucan biosynthesis protein G YP_001209534.1 667619 D 246195 CDS YP_001209535.1 146329303 5122617 669142..671259 1 NC_009446.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 671259 mdoH 5122617 mdoH Dichelobacter nodosus VCS1703A glucosyltransferase MdoH YP_001209535.1 669142 D 246195 CDS YP_001209536.1 146328716 5122831 671285..672415 1 NC_009446.1 identified by match to protein family HMM PF01171; match to protein family HMM PF03054; match to protein family HMM TIGR00420; tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase 672415 trmU 5122831 trmU Dichelobacter nodosus VCS1703A tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase YP_001209536.1 671285 D 246195 CDS YP_001209537.1 146329524 5123007 672402..673013 1 NC_009446.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 673013 5123007 DNO_0629 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209537.1 672402 D 246195 CDS YP_001209538.1 146328744 5122374 complement(673010..673825) 1 NC_009446.1 identified by match to protein family HMM PF03618; hypothetical protein 673825 5122374 DNO_0628 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209538.1 673010 R 246195 CDS YP_001209539.1 146329842 5123294 674079..676463 1 NC_009446.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 676463 ppsA 5123294 ppsA Dichelobacter nodosus VCS1703A phosphoenolpyruvate synthase YP_001209539.1 674079 D 246195 CDS YP_001209540.1 146329747 5122185 complement(676520..677209) 1 NC_009446.1 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628; uracil-DNA glycosylase 677209 ung 5122185 ung Dichelobacter nodosus VCS1703A uracil-DNA glycosylase YP_001209540.1 676520 R 246195 CDS YP_001209541.1 146328974 5123356 complement(677212..677610) 1 NC_009446.1 putative lipoprotein 677610 5123356 DNO_0632 Dichelobacter nodosus VCS1703A putative lipoprotein YP_001209541.1 677212 R 246195 CDS YP_001209542.1 146329151 5122486 complement(677580..679445) 1 NC_009446.1 identified by match to protein family HMM PF01464; lytic murein transglycosylase 679445 5122486 DNO_0633 Dichelobacter nodosus VCS1703A lytic murein transglycosylase YP_001209542.1 677580 R 246195 CDS YP_001209543.1 146329890 5123093 complement(679461..680159) 1 NC_009446.1 identified by match to protein family HMM PF01464; transglycosylase 680159 5123093 DNO_0634 Dichelobacter nodosus VCS1703A transglycosylase YP_001209543.1 679461 R 246195 CDS YP_001209544.1 146329181 5122978 complement(680156..681709) 1 NC_009446.1 identified by match to protein family HMM PF01464; transglycosylase 681709 5122978 DNO_0635 Dichelobacter nodosus VCS1703A transglycosylase YP_001209544.1 680156 R 246195 CDS YP_001209545.1 146329423 5123197 complement(681706..682596) 1 NC_009446.1 hypothetical protein 682596 5123197 DNO_0636 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209545.1 681706 R 246195 CDS YP_001209546.1 146328885 5122452 complement(682608..683705) 1 NC_009446.1 identified by match to protein family HMM PF05816; toxic anion resistance protein 683705 telA 5122452 telA Dichelobacter nodosus VCS1703A toxic anion resistance protein YP_001209546.1 682608 R 246195 CDS YP_001209547.1 146329567 5122475 complement(683695..684564) 1 NC_009446.1 hypothetical protein 684564 5122475 DNO_0638 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209547.1 683695 R 246195 CDS YP_001209548.1 146329882 5122854 complement(684786..685166) 1 NC_009446.1 identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 685166 5122854 DNO_0639 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209548.1 684786 R 246195 CDS YP_001209549.1 146329351 5123191 685165..686007 1 NC_009446.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 686007 5123191 DNO_0641 Dichelobacter nodosus VCS1703A tetrapyrrole methylase family protein YP_001209549.1 685165 D 246195 CDS YP_001209550.1 146329155 5122304 complement(685989..686801) 1 NC_009446.1 identified by match to protein family HMM PF00950; ABC iron transporter permease YfeD 686801 yfeD 5122304 yfeD Dichelobacter nodosus VCS1703A ABC iron transporter permease YfeD YP_001209550.1 685989 R 246195 CDS YP_001209551.1 146329638 5122348 complement(686816..687646) 1 NC_009446.1 identified by match to protein family HMM PF00950; ABC iron transporter YfeC 687646 yfeC 5122348 yfeC Dichelobacter nodosus VCS1703A ABC iron transporter YfeC YP_001209551.1 686816 R 246195 CDS YP_001209552.1 146328765 5122919 complement(687643..688488) 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC iron transporter ATP-binding protein YfeB 688488 yfeB 5122919 yfeB Dichelobacter nodosus VCS1703A ABC iron transporter ATP-binding protein YfeB YP_001209552.1 687643 R 246195 CDS YP_001209553.1 146329439 5123282 complement(688490..689392) 1 NC_009446.1 identified by match to protein family HMM PF01297; periplasmic iron-binding protein YfeA 689392 yfeA 5123282 yfeA Dichelobacter nodosus VCS1703A periplasmic iron-binding protein YfeA YP_001209553.1 688490 R 246195 CDS YP_001209554.1 146329594 5123048 689561..690181 1 NC_009446.1 identified by match to protein family HMM PF00625; guanylate kinase 690181 5123048 DNO_0645 Dichelobacter nodosus VCS1703A guanylate kinase YP_001209554.1 689561 D 246195 CDS YP_001209555.1 146328968 5123252 complement(690224..692062) 1 NC_009446.1 identified by match to protein family HMM PF00425; match to protein family HMM PF01063; chorismate binding family protein 692062 5123252 DNO_0646 Dichelobacter nodosus VCS1703A chorismate binding family protein YP_001209555.1 690224 R 246195 CDS YP_001209556.1 146329705 5122635 complement(692067..693110) 1 NC_009446.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A-G-specific adenine glycosylase 693110 mutY 5122635 mutY Dichelobacter nodosus VCS1703A A-G-specific adenine glycosylase YP_001209556.1 692067 R 246195 CDS YP_001209557.1 146329907 5122990 complement(693136..693978) 1 NC_009446.1 identified by match to protein family HMM PF00348; geranyltranstransferase 693978 ispA 5122990 ispA Dichelobacter nodosus VCS1703A geranyltranstransferase YP_001209557.1 693136 R 246195 CDS YP_001209558.1 146328639 5122932 complement(694003..694953) 1 NC_009446.1 identified by match to protein family HMM PF03193; match to protein family HMM TIGR00157; hypothetical protein 694953 5122932 DNO_0649 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209558.1 694003 R 246195 CDS YP_001209559.1 146329425 5122478 complement(694960..695712) 1 NC_009446.1 identified by match to protein family HMM PF04333; VacJ-like lipoprotein 695712 5122478 DNO_0650 Dichelobacter nodosus VCS1703A VacJ-like lipoprotein YP_001209559.1 694960 R 246195 CDS YP_001209560.1 146329499 5122126 complement(695771..696832) 1 NC_009446.1 identified by match to protein family HMM PF01594; hypothetical protein 696832 5122126 DNO_0651 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209560.1 695771 R 246195 CDS YP_001209561.1 146329306 5122693 696967..697869 1 NC_009446.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 697869 5122693 DNO_0652 Dichelobacter nodosus VCS1703A N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001209561.1 696967 D 246195 CDS YP_001209562.1 146329349 5122247 complement(697923..698648) 1 NC_009446.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase 698648 5122247 DNO_0653 Dichelobacter nodosus VCS1703A glutamine amidotransferase YP_001209562.1 697923 R 246195 CDS YP_001209563.1 146329112 5122299 698853..700343 1 NC_009446.1 identified by match to protein family HMM PF03553; Na+-H+ antiporter family protein 700343 5122299 DNO_0654 Dichelobacter nodosus VCS1703A Na+-H+ antiporter family protein YP_001209563.1 698853 D 246195 CDS YP_001209564.1 146329099 5122669 complement(700386..702677) 1 NC_009446.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; ATP-dependent Clp protease ATP-binding subunit ClpA 702677 clpA 5122669 clpA Dichelobacter nodosus VCS1703A ATP-dependent Clp protease ATP-binding subunit ClpA YP_001209564.1 700386 R 246195 CDS YP_001209565.1 146329659 5122474 complement(702690..703004) 1 NC_009446.1 identified by match to protein family HMM PF02617; ATP-dependent Clp protease adaptor protein ClpS 703004 clpS 5122474 clpS Dichelobacter nodosus VCS1703A ATP-dependent Clp protease adaptor protein ClpS YP_001209565.1 702690 R 246195 CDS YP_001209566.1 146329130 5122566 703250..704287 1 NC_009446.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 704287 pyrC 5122566 pyrC Dichelobacter nodosus VCS1703A dihydroorotase YP_001209566.1 703250 D 246195 CDS YP_001209567.1 146329170 5122633 704334..704951 1 NC_009446.1 identified by match to protein family HMM PF00293; NUDIX domain-containing protein 704951 5122633 DNO_0658 Dichelobacter nodosus VCS1703A NUDIX domain-containing protein YP_001209567.1 704334 D 246195 CDS YP_001209568.1 146329047 5123170 704973..705872 1 NC_009446.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 705872 5123170 DNO_0659 Dichelobacter nodosus VCS1703A cation efflux family protein YP_001209568.1 704973 D 246195 CDS YP_001209569.1 146328789 5122939 705935..706339 1 NC_009446.1 hypothetical protein 706339 5122939 DNO_0660 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209569.1 705935 D 246195 CDS YP_001209570.1 146329089 5123458 706400..707206 1 NC_009446.1 identified by match to protein family HMM PF05175; match to protein family HMM PF08241; match to protein family HMM PF08242; S-adenosylmethionine-dependent methyltransferase 707206 5123458 DNO_0661 Dichelobacter nodosus VCS1703A S-adenosylmethionine-dependent methyltransferase YP_001209570.1 706400 D 246195 CDS YP_001209571.1 146329637 5123270 707241..708455 1 NC_009446.1 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; xanthine/uracil permease family protein 708455 5123270 DNO_0662 Dichelobacter nodosus VCS1703A xanthine/uracil permease family protein YP_001209571.1 707241 D 246195 CDS YP_001209572.1 146329252 5122848 complement(708512..709102) 1 NC_009446.1 identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; Ham1-like protein 709102 rdgB 5122848 rdgB Dichelobacter nodosus VCS1703A Ham1-like protein YP_001209572.1 708512 R 246195 CDS YP_001209573.1 146328830 5123401 complement(709105..709821) 1 NC_009446.1 identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966; ribonuclease PH 709821 rph 5123401 rph Dichelobacter nodosus VCS1703A ribonuclease PH YP_001209573.1 709105 R 246195 CDS YP_001209574.1 146329389 5123420 709894..710754 1 NC_009446.1 identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein 710754 5123420 DNO_0665 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209574.1 709894 D 246195 CDS YP_001209575.1 146329722 5122334 complement(710818..711327) 1 NC_009446.1 identified by match to protein family HMM PF02600; thiol:disulfide interchange protein DsbB 711327 dsbB 5122334 dsbB Dichelobacter nodosus VCS1703A thiol:disulfide interchange protein DsbB YP_001209575.1 710818 R 246195 CDS YP_001209576.1 146328990 5123123 complement(711355..712728) 1 NC_009446.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 712728 purB 5123123 purB Dichelobacter nodosus VCS1703A adenylosuccinate lyase YP_001209576.1 711355 R 246195 CDS YP_001209577.1 146329757 5122778 complement(712738..713241) 1 NC_009446.1 identified by match to protein family HMM PF04608; phosphatidylglycerophosphatase A 713241 pgpA 5122778 pgpA Dichelobacter nodosus VCS1703A phosphatidylglycerophosphatase A YP_001209577.1 712738 R 246195 CDS YP_001209578.1 146329327 5123346 complement(713246..714259) 1 NC_009446.1 identified by match to protein family HMM PF01180; match to protein family HMM TIGR01036; dihydroorotate dehydrogenase 714259 pyrD 5123346 pyrD Dichelobacter nodosus VCS1703A dihydroorotate dehydrogenase YP_001209578.1 713246 R 246195 CDS YP_001209579.1 146328864 5122979 complement(714284..715360) 1 NC_009446.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 715360 5122979 DNO_0670 Dichelobacter nodosus VCS1703A phosphoserine aminotransferase YP_001209579.1 714284 R 246195 CDS YP_001209580.1 146329863 5122242 complement(715365..715562) 1 NC_009446.1 hypothetical protein 715562 5122242 DNO_0671 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209580.1 715365 R 246195 CDS YP_001209581.1 146328969 5122940 complement(715559..717457) 1 NC_009446.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 717457 gidA 5122940 gidA Dichelobacter nodosus VCS1703A tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001209581.1 715559 R 246195 CDS YP_001209582.1 146328690 5122601 complement(717482..718000) 1 NC_009446.1 identified by match to protein family HMM PF02325; hypothetical protein 718000 5122601 DNO_0673 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209582.1 717482 R 246195 CDS YP_001209583.1 146329420 5122889 complement(718000..718857) 1 NC_009446.1 identified by match to protein family HMM PF01408; match to protein family HMM PF03807; match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase 718857 proC 5122889 proC Dichelobacter nodosus VCS1703A pyrroline-5-carboxylate reductase YP_001209583.1 718000 R 246195 CDS YP_001209584.1 146329541 5123386 718972..720045 1 NC_009446.1 identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein PilT 720045 pilT 5123386 pilT Dichelobacter nodosus VCS1703A twitching motility protein PilT YP_001209584.1 718972 D 246195 CDS YP_001209585.1 146329238 5122594 720058..721278 1 NC_009446.1 identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein PilU 721278 pilU 5122594 pilU Dichelobacter nodosus VCS1703A twitching motility protein PilU YP_001209585.1 720058 D 246195 CDS YP_001209586.1 146329798 5122870 721284..723191 1 NC_009446.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 723191 parE 5122870 parE Dichelobacter nodosus VCS1703A DNA topoisomerase IV subunit B YP_001209586.1 721284 D 246195 CDS YP_001209587.1 146329441 5122462 723201..725420 1 NC_009446.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 725420 parC 5122462 parC Dichelobacter nodosus VCS1703A DNA topoisomerase IV subunit A YP_001209587.1 723201 D 246195 CDS YP_001209588.1 146329570 5122382 725420..727186 1 NC_009446.1 identified by match to protein family HMM PF00755; choline-carnitine o-acyltransferase family protein 727186 5122382 DNO_0679 Dichelobacter nodosus VCS1703A choline-carnitine o-acyltransferase family protein YP_001209588.1 725420 D 246195 CDS YP_001209589.1 146329399 5123228 complement(727194..727874) 1 NC_009446.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 727874 aat 5123228 aat Dichelobacter nodosus VCS1703A leucyl/phenylalanyl-tRNA--protein transferase YP_001209589.1 727194 R 246195 CDS YP_001209590.1 146329889 5123208 727995..730295 1 NC_009446.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; outer membrane protein 730295 5123208 DNO_0681 Dichelobacter nodosus VCS1703A outer membrane protein YP_001209590.1 727995 D 246195 CDS YP_001209591.1 146328754 5122153 730303..730917 1 NC_009446.1 identified by match to protein family HMM PF03938; OmpH family protein 730917 5122153 DNO_0682 Dichelobacter nodosus VCS1703A OmpH family protein YP_001209591.1 730303 D 246195 CDS YP_001209592.1 146329765 5122354 730898..731893 1 NC_009446.1 identified by match to protein family HMM PF00132; match to protein family HMM PF04613; match to protein family HMM TIGR01853; UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase 731893 lpxD 5122354 lpxD Dichelobacter nodosus VCS1703A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase YP_001209592.1 730898 D 246195 CDS YP_001209593.1 146329070 5123338 731890..732387 1 NC_009446.1 identified by match to protein family HMM PF07977; match to protein family HMM TIGR01750; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 732387 fabZ 5123338 fabZ Dichelobacter nodosus VCS1703A beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_001209593.1 731890 D 246195 CDS YP_001209594.1 146329695 5123237 732387..733160 1 NC_009446.1 identified by match to protein family HMM PF00132; match to protein family HMM TIGR01852; acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase 733160 lpxA 5123237 lpxA Dichelobacter nodosus VCS1703A acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase YP_001209594.1 732387 D 246195 CDS YP_001209595.1 146328829 5122194 733167..734324 1 NC_009446.1 identified by match to protein family HMM PF02684; match to protein family HMM TIGR00215; lipid-A-disaccharide synthase 734324 lpxB 5122194 lpxB Dichelobacter nodosus VCS1703A lipid-A-disaccharide synthase YP_001209595.1 733167 D 246195 CDS YP_001209596.1 146328634 5123411 734321..734890 1 NC_009446.1 identified by match to protein family HMM PF01351; ribonuclease HII 734890 rnhB 5123411 rnhB Dichelobacter nodosus VCS1703A ribonuclease HII YP_001209596.1 734321 D 246195 CDS YP_001209597.1 146329848 5123286 734925..738452 1 NC_009446.1 identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 738452 dnaE 5123286 dnaE Dichelobacter nodosus VCS1703A DNA polymerase III subunit alpha YP_001209597.1 734925 D 246195 CDS YP_001209598.1 146329097 5122146 complement(738458..741811) 1 NC_009446.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor 741811 mfd 5122146 mfd Dichelobacter nodosus VCS1703A transcription-repair coupling factor YP_001209598.1 738458 R 246195 CDS YP_001209599.1 146329090 5122801 complement(741913..745275) 1 NC_009446.1 hypothetical protein 745275 5122801 DNO_0690 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209599.1 741913 R 246195 CDS YP_001209600.1 146329627 5122987 complement(745734..746633) 1 NC_009446.1 identified by match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; match to protein family HMM TIGR00650; GTP-binding protein Era 746633 era 5122987 era Dichelobacter nodosus VCS1703A GTP-binding protein Era YP_001209600.1 745734 R 246195 CDS YP_001209601.1 146329595 5122434 complement(746630..747331) 1 NC_009446.1 identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III 747331 rnc 5122434 rnc Dichelobacter nodosus VCS1703A ribonuclease III YP_001209601.1 746630 R 246195 CDS YP_001209602.1 146328677 5122945 complement(747331..748302) 1 NC_009446.1 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 748302 lepB 5122945 lepB Dichelobacter nodosus VCS1703A signal peptidase I YP_001209602.1 747331 R 246195 CDS YP_001209603.1 146329364 5122991 complement(748315..750117) 1 NC_009446.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 750117 lepA 5122991 lepA Dichelobacter nodosus VCS1703A GTP-binding protein LepA YP_001209603.1 748315 R 246195 CDS YP_001209604.1 146329887 5122541 750343..751140 1 NC_009446.1 identified by match to protein family HMM PF07670; hypothetical protein 751140 5122541 DNO_0695 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209604.1 750343 D 246195 CDS YP_001209605.1 146329005 5122321 751142..751600 1 NC_009446.1 identified by match to protein family HMM PF07670; hypothetical protein 751600 5122321 DNO_0696 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209605.1 751142 D 246195 CDS YP_001209606.1 146329533 5122708 751611..752738 1 NC_009446.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; M20 family peptidase 752738 5122708 DNO_0697 Dichelobacter nodosus VCS1703A M20 family peptidase YP_001209606.1 751611 D 246195 CDS YP_001209607.1 146328810 5122650 752830..754590 1 NC_009446.1 identified by match to protein family HMM PF00916; match to protein family HMM PF01740; sulfate transporter family protein 754590 5122650 DNO_0698 Dichelobacter nodosus VCS1703A sulfate transporter family protein YP_001209607.1 752830 D 246195 CDS YP_001209608.1 146329711 5123432 754651..755115 1 NC_009446.1 lipoprotein 755115 5123432 DNO_0700 Dichelobacter nodosus VCS1703A lipoprotein YP_001209608.1 754651 D 246195 CDS YP_001209609.1 146329483 5123016 complement(755112..755825) 1 NC_009446.1 identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107; purine nucleoside phosphorylase 755825 deoD 5123016 deoD Dichelobacter nodosus VCS1703A purine nucleoside phosphorylase YP_001209609.1 755112 R 246195 CDS YP_001209610.1 146329866 5122684 755942..756841 1 NC_009446.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 756841 glyQ 5122684 glyQ Dichelobacter nodosus VCS1703A glycyl-tRNA synthetase subunit alpha YP_001209610.1 755942 D 246195 CDS YP_001209611.1 146329175 5123174 756838..758907 1 NC_009446.1 identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211; glycyl-tRNA synthetase subunit beta 758907 glyS 5123174 glyS Dichelobacter nodosus VCS1703A glycyl-tRNA synthetase subunit beta YP_001209611.1 756838 D 246195 CDS YP_001209612.1 146329730 5123385 759026..759505 1 NC_009446.1 identified by match to protein family HMM PF03610; PTS system, fructose IIA component 759505 5123385 DNO_0703 Dichelobacter nodosus VCS1703A PTS system, fructose IIA component YP_001209612.1 759026 D 246195 CDS YP_001209613.1 146329013 5123373 759492..759956 1 NC_009446.1 identified by match to protein family HMM PF04074; match to protein family HMM TIGR00022; hypothetical protein 759956 5123373 DNO_0704 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209613.1 759492 D 246195 CDS YP_001209614.1 146328928 5122804 759975..760868 1 NC_009446.1 identified by match to protein family HMM PF00480; ROK family protein 760868 5122804 DNO_0705 Dichelobacter nodosus VCS1703A ROK family protein YP_001209614.1 759975 D 246195 CDS YP_001209615.1 146328761 5122710 760865..761605 1 NC_009446.1 identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; phosphoglycerate mutase 761605 5122710 DNO_0706 Dichelobacter nodosus VCS1703A phosphoglycerate mutase YP_001209615.1 760865 D 246195 CDS YP_001209616.1 146328844 5123278 761783..762232 1 NC_009446.1 identified by match to protein family HMM PF01475; zinc uptake regulation protein 762232 zur 5123278 zur Dichelobacter nodosus VCS1703A zinc uptake regulation protein YP_001209616.1 761783 D 246195 CDS YP_001209617.1 146329702 5122572 762240..762719 1 NC_009446.1 identified by match to protein family HMM PF00588; rRNA methyltransferase 762719 5122572 DNO_0708 Dichelobacter nodosus VCS1703A rRNA methyltransferase YP_001209617.1 762240 D 246195 CDS YP_001209618.1 146328700 5122175 762730..763617 1 NC_009446.1 identified by match to protein family HMM PF01040; match to protein family HMM TIGR00751; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 763617 menA 5122175 menA Dichelobacter nodosus VCS1703A 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001209618.1 762730 D 246195 CDS YP_001209619.1 146329584 5123233 763815..765128 1 NC_009446.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 765128 5123233 DNO_0711 Dichelobacter nodosus VCS1703A anaerobic C4-dicarboxylate transporter YP_001209619.1 763815 D 246195 CDS YP_001209620.1 146329421 5122444 complement(765921..768800) 1 NC_009446.1 type IV fimbrial biogenesis protein FimV 768800 fimV 5122444 fimV Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis protein FimV YP_001209620.1 765921 R 246195 CDS YP_001209621.1 146329643 5122507 769073..769756 1 NC_009446.1 identified by match to protein family HMM PF02230; phospholipase/carboxylesterase family protein 769756 5122507 DNO_0714 Dichelobacter nodosus VCS1703A phospholipase/carboxylesterase family protein YP_001209621.1 769073 D 246195 CDS YP_001209622.1 146329253 5122550 complement(769745..770068) 1 NC_009446.1 hypothetical protein 770068 5122550 DNO_0713 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209622.1 769745 R 246195 CDS YP_001209623.1 146329341 5123327 complement(770065..770451) 1 NC_009446.1 hypothetical protein 770451 5123327 DNO_0715 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209623.1 770065 R 246195 CDS YP_001209624.1 146328916 5123148 770476..771045 1 NC_009446.1 hypothetical protein 771045 5123148 DNO_0717 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209624.1 770476 D 246195 CDS YP_001209625.1 146329474 5122753 complement(771037..772482) 1 NC_009446.1 identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; M50 family zinc metalloprotease 772482 5122753 DNO_0716 Dichelobacter nodosus VCS1703A M50 family zinc metalloprotease YP_001209625.1 771037 R 246195 CDS YP_001209626.1 146328944 5122755 complement(772443..773276) 1 NC_009446.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 773276 cdsA 5122755 cdsA Dichelobacter nodosus VCS1703A phosphatidate cytidylyltransferase YP_001209626.1 772443 R 246195 CDS YP_001209627.1 146329490 5122644 complement(773276..774019) 1 NC_009446.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase 774019 uppS 5122644 uppS Dichelobacter nodosus VCS1703A undecaprenyl diphosphate synthase YP_001209627.1 773276 R 246195 CDS YP_001209628.1 146328643 5122623 complement(774020..774577) 1 NC_009446.1 identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor 774577 frr 5122623 frr Dichelobacter nodosus VCS1703A ribosome recycling factor YP_001209628.1 774020 R 246195 CDS YP_001209629.1 146328641 5122914 complement(774587..775312) 1 NC_009446.1 identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; uridylate kinase 775312 pyrH 5122914 pyrH Dichelobacter nodosus VCS1703A uridylate kinase YP_001209629.1 774587 R 246195 CDS YP_001209630.1 146329239 5122162 complement(775472..776353) 1 NC_009446.1 identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; elongation factor Ts 776353 tsf 5122162 tsf Dichelobacter nodosus VCS1703A elongation factor Ts YP_001209630.1 775472 R 246195 CDS YP_001209631.1 146328956 5122246 complement(776365..777168) 1 NC_009446.1 identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 777168 rpsB 5122246 rpsB Dichelobacter nodosus VCS1703A 30S ribosomal protein S2 YP_001209631.1 776365 R 246195 CDS YP_001209632.1 146328705 5122556 777377..778168 1 NC_009446.1 identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 778168 map 5122556 map Dichelobacter nodosus VCS1703A methionine aminopeptidase YP_001209632.1 777377 D 246195 CDS YP_001209633.1 146329297 5122257 complement(778217..778909) 1 NC_009446.1 adhesin complex protein 778909 5122257 DNO_0725 Dichelobacter nodosus VCS1703A adhesin complex protein YP_001209633.1 778217 R 246195 CDS YP_001209634.1 146329851 5123304 779091..779273 1 NC_009446.1 hypothetical protein 779273 5123304 DNO_0726 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209634.1 779091 D 246195 CDS YP_001209635.1 146328984 5123032 779270..780058 1 NC_009446.1 identified by match to protein family HMM PF01026; TatD family deoxyribonuclease 780058 5123032 DNO_0727 Dichelobacter nodosus VCS1703A TatD family deoxyribonuclease YP_001209635.1 779270 D 246195 CDS YP_001209636.1 146328828 5122496 780107..781411 1 NC_009446.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease family protein 781411 5122496 DNO_0728 Dichelobacter nodosus VCS1703A xanthine/uracil permease family protein YP_001209636.1 780107 D 246195 CDS YP_001209637.1 146329542 5123410 complement(781452..782009) 1 NC_009446.1 hypothetical protein 782009 5123410 DNO_0729 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209637.1 781452 R 246195 CDS YP_001209638.1 146328660 5122677 complement(782048..783955) 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 783955 5122677 DNO_0730 Dichelobacter nodosus VCS1703A ABC transporter ATP-binding protein YP_001209638.1 782048 R 246195 CDS YP_001209639.1 146329298 5122161 complement(784577..785974) 1 NC_009446.1 identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamyl-tRNA synthetase 785974 gltX 5122161 gltX Dichelobacter nodosus VCS1703A glutamyl-tRNA synthetase YP_001209639.1 784577 R 246195 CDS YP_001209640.1 146328902 5122392 786124..786570 1 NC_009446.1 identified by match to protein family HMM PF00903; match to protein family HMM TIGR00068; lactoylglutathione lyase 786570 5122392 DNO_0735 Dichelobacter nodosus VCS1703A lactoylglutathione lyase YP_001209640.1 786124 D 246195 CDS YP_001209641.1 146329362 5122790 complement(786607..787872) 1 NC_009446.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 787872 rho 5122790 rho Dichelobacter nodosus VCS1703A transcription termination factor Rho YP_001209641.1 786607 R 246195 CDS YP_001209642.1 146328748 5122524 complement(787971..788297) 1 NC_009446.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin I 788297 trxA 5122524 trxA Dichelobacter nodosus VCS1703A thioredoxin I YP_001209642.1 787971 R 246195 CDS YP_001209643.1 146329902 5122133 788697..788795 1 NC_009446.1 hypothetical protein 788795 5122133 DNO_0738 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209643.1 788697 D 246195 CDS YP_001209644.1 146329733 5122967 788865..789692 1 NC_009446.1 identified by match to protein family HMM PF05838; hypothetical protein 789692 5122967 DNO_0739 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209644.1 788865 D 246195 CDS YP_001209645.1 146328912 5123370 789685..789960 1 NC_009446.1 hypothetical protein 789960 5123370 DNO_0740 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209645.1 789685 D 246195 CDS YP_001209646.1 146329680 5122764 789863..790168 1 NC_009446.1 hypothetical protein 790168 5122764 DNO_0741 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209646.1 789863 D 246195 CDS YP_001209647.1 146329868 5123135 790165..790956 1 NC_009446.1 hypothetical protein 790956 5123135 DNO_0742 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209647.1 790165 D 246195 CDS YP_001209648.1 146328895 5123040 790934..792208 1 NC_009446.1 identified by match to protein family HMM PF04466; match to protein family HMM TIGR01547; phage terminase, large subunit 792208 5123040 DNO_0743 Dichelobacter nodosus VCS1703A phage terminase, large subunit YP_001209648.1 790934 D 246195 CDS YP_001209649.1 146329103 5123004 793659..795158 1 NC_009446.1 identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641; phage virion morphogenesis-like protein 795158 5123004 DNO_0745 Dichelobacter nodosus VCS1703A phage virion morphogenesis-like protein YP_001209649.1 793659 D 246195 CDS YP_001209650.1 146329806 5123241 795669..796067 1 NC_009446.1 hypothetical protein 796067 5123241 DNO_0746 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209650.1 795669 D 246195 CDS YP_001209651.1 146329231 5122469 796078..796899 1 NC_009446.1 hypothetical protein 796899 5122469 DNO_0747 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209651.1 796078 D 246195 CDS YP_001209652.1 146329361 5122841 796902..797888 1 NC_009446.1 hypothetical protein 797888 5122841 DNO_0748 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209652.1 796902 D 246195 CDS YP_001209653.1 146328772 5123443 797910..798377 1 NC_009446.1 identified by match to protein family HMM PF07030; hypothetical protein 798377 5123443 DNO_0749 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209653.1 797910 D 246195 CDS YP_001209654.1 146329339 5123271 798374..798799 1 NC_009446.1 identified by match to protein family HMM PF05069; match to protein family HMM TIGR01635; phage virion morphogenesis-like protein 798799 5123271 DNO_0750 Dichelobacter nodosus VCS1703A phage virion morphogenesis-like protein YP_001209654.1 798374 D 246195 CDS YP_001209655.1 146328676 5123138 798780..799247 1 NC_009446.1 hypothetical protein 799247 5123138 DNO_0751 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209655.1 798780 D 246195 CDS YP_001209656.1 146329626 5122829 799244..800011 1 NC_009446.1 hypothetical protein 800011 5122829 DNO_0752 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209656.1 799244 D 246195 CDS YP_001209657.1 146328825 5123025 800014..800241 1 NC_009446.1 hypothetical protein 800241 5123025 DNO_0753 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209657.1 800014 D 246195 CDS YP_001209658.1 146329670 5123414 800249..800458 1 NC_009446.1 hypothetical protein 800458 5123414 DNO_0754 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209658.1 800249 D 246195 CDS YP_001209659.1 146329828 5123277 800495..804466 1 NC_009446.1 identified by match to protein family HMM TIGR01760; phage tail tape measure family protein 804466 5123277 DNO_0755 Dichelobacter nodosus VCS1703A phage tail tape measure family protein YP_001209659.1 800495 D 246195 CDS YP_001209660.1 146329092 5123239 804463..804867 1 NC_009446.1 hypothetical protein 804867 5123239 DNO_0756 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209660.1 804463 D 246195 CDS YP_001209661.1 146329183 5123378 804876..808505 1 NC_009446.1 hypothetical protein 808505 5123378 DNO_0757 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209661.1 804876 D 246195 CDS YP_001209662.1 146329888 5123147 808507..809373 1 NC_009446.1 hypothetical protein 809373 5123147 DNO_0758 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209662.1 808507 D 246195 CDS YP_001209663.1 146328996 5122347 809285..809710 1 NC_009446.1 hypothetical protein 809710 5122347 DNO_0759 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209663.1 809285 D 246195 CDS YP_001209664.1 146328908 5122733 809707..811383 1 NC_009446.1 hypothetical protein 811383 5122733 DNO_0760 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209664.1 809707 D 246195 CDS YP_001209665.1 146328719 5122773 811392..811619 1 NC_009446.1 hypothetical protein 811619 5122773 DNO_0761 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209665.1 811392 D 246195 CDS YP_001209666.1 146328664 5122145 complement(812055..812618) 1 NC_009446.1 hypothetical protein 812618 5122145 DNO_0762 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209666.1 812055 R 246195 CDS YP_001209667.1 146328655 5123406 complement(812666..814279) 1 NC_009446.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; helicase family protein 814279 5123406 DNO_0763 Dichelobacter nodosus VCS1703A helicase family protein YP_001209667.1 812666 R 246195 CDS YP_001209668.1 146329212 5123255 complement(814328..815422) 1 NC_009446.1 hypothetical protein 815422 5123255 DNO_0764 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209668.1 814328 R 246195 CDS YP_001209669.1 146328988 5122888 complement(815574..816242) 1 NC_009446.1 hypothetical protein 816242 5122888 DNO_0765 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209669.1 815574 R 246195 CDS YP_001209670.1 146329532 5122701 complement(816363..816617) 1 NC_009446.1 hypothetical protein 816617 5122701 DNO_0766 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209670.1 816363 R 246195 CDS YP_001209671.1 146329431 5122596 complement(816635..817090) 1 NC_009446.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 817090 ssb-2 5122596 ssb-2 Dichelobacter nodosus VCS1703A single-strand binding protein YP_001209671.1 816635 R 246195 CDS YP_001209672.1 146328650 5122615 complement(817103..817960) 1 NC_009446.1 hypothetical protein 817960 5122615 DNO_0768 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209672.1 817103 R 246195 CDS YP_001209673.1 146328999 5123044 complement(817957..818562) 1 NC_009446.1 identified by match to protein family HMM PF04404; bacteriophage recombination function protein 818562 5123044 DNO_0769 Dichelobacter nodosus VCS1703A bacteriophage recombination function protein YP_001209673.1 817957 R 246195 CDS YP_001209674.1 146328878 5122712 complement(818588..818920) 1 NC_009446.1 hypothetical protein 818920 5122712 DNO_0770 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209674.1 818588 R 246195 CDS YP_001209675.1 146328730 5123326 complement(818920..819207) 1 NC_009446.1 hypothetical protein 819207 5123326 DNO_0771 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209675.1 818920 R 246195 CDS YP_001209676.1 146328868 5122389 complement(819315..820748) 1 NC_009446.1 hypothetical protein 820748 5122389 DNO_0772 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209676.1 819315 R 246195 CDS YP_001209677.1 146329855 5123012 complement(820877..821794) 1 NC_009446.1 identified by match to protein family HMM PF00717; match to protein family HMM PF01381; regulatory protein RegA2 821794 regA2 5123012 regA2 Dichelobacter nodosus VCS1703A regulatory protein RegA2 YP_001209677.1 820877 R 246195 CDS YP_001209678.1 146329150 5123115 822196..822459 1 NC_009446.1 hypothetical protein 822459 5123115 DNO_0774 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209678.1 822196 D 246195 CDS YP_001209679.1 146328636 5123151 822460..823347 1 NC_009446.1 hypothetical protein 823347 5123151 DNO_0775 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209679.1 822460 D 246195 CDS YP_001209680.1 146329328 5122192 823352..824116 1 NC_009446.1 identified by match to protein family HMM PF01695; DNA replication protein DnaC 824116 dnaC 5122192 dnaC Dichelobacter nodosus VCS1703A DNA replication protein DnaC YP_001209680.1 823352 D 246195 CDS YP_001209681.1 146328943 5123165 826234..826611 1 NC_009446.1 identified by match to protein family HMM PF05866; endodeoxyribonuclease RusA family protein 826611 5123165 DNO_0780 Dichelobacter nodosus VCS1703A endodeoxyribonuclease RusA family protein YP_001209681.1 826234 D 246195 CDS YP_001209682.1 146329779 5122655 826605..826961 1 NC_009446.1 hypothetical protein 826961 5122655 DNO_0781 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209682.1 826605 D 246195 CDS YP_001209683.1 146329065 5122438 826961..827212 1 NC_009446.1 hypothetical protein 827212 5122438 DNO_0782 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209683.1 826961 D 246195 CDS YP_001209684.1 146328750 5123039 827196..827603 1 NC_009446.1 hypothetical protein 827603 5123039 DNO_0783 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209684.1 827196 D 246195 CDS YP_001209685.1 146329665 5122166 complement(828101..829300) 1 NC_009446.1 identified by match to protein family HMM PF00589; bacteriophage P4-like integrase 829300 5122166 DNO_0784 Dichelobacter nodosus VCS1703A bacteriophage P4-like integrase YP_001209685.1 828101 R 246195 CDS YP_001209686.1 146329353 5123100 829430..830461 1 NC_009446.1 metallo-hydrolase family protein 830461 5123100 DNO_0785 Dichelobacter nodosus VCS1703A metallo-hydrolase family protein YP_001209686.1 829430 D 246195 CDS YP_001209687.1 146328785 5122292 830502..830921 1 NC_009446.1 identified by match to protein family HMM PF02566; OsmC-like protein 830921 5122292 DNO_0786 Dichelobacter nodosus VCS1703A OsmC-like protein YP_001209687.1 830502 D 246195 CDS YP_001209688.1 146329472 5123463 831001..832341 1 NC_009446.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; multidrug efflux protein 832341 5123463 DNO_0787 Dichelobacter nodosus VCS1703A multidrug efflux protein YP_001209688.1 831001 D 246195 CDS YP_001209689.1 146328898 5122668 832328..832822 1 NC_009446.1 identified by match to protein family HMM PF00186; dihydrofolate reductase 832822 folA 5122668 folA Dichelobacter nodosus VCS1703A dihydrofolate reductase YP_001209689.1 832328 D 246195 CDS YP_001209690.1 146328980 5123279 complement(832819..833265) 1 NC_009446.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 833265 5123279 DNO_0788 Dichelobacter nodosus VCS1703A MarR family transcriptional regulator YP_001209690.1 832819 R 246195 CDS YP_001209691.1 146329758 5122494 complement(833331..833513) 1 NC_009446.1 hypothetical protein 833513 5122494 DNO_0790 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209691.1 833331 R 246195 CDS YP_001209692.1 146329269 5123345 complement(833826..835031) 1 NC_009446.1 identified by match to protein family HMM PF04932; O-antigen ligase 835031 5123345 DNO_0791 Dichelobacter nodosus VCS1703A O-antigen ligase YP_001209692.1 833826 R 246195 CDS YP_001209693.1 146329697 5123258 complement(835028..835948) 1 NC_009446.1 identified by match to protein family HMM PF01625; match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine sulfoxide reductase MsrA-B 835948 msrA-B 5123258 msrA-B Dichelobacter nodosus VCS1703A methionine sulfoxide reductase MsrA-B YP_001209693.1 835028 R 246195 CDS YP_001209694.1 146328788 5123260 836561..837130 1 NC_009446.1 identified by match to protein family HMM PF04011; LemA family protein 837130 5123260 DNO_0794 Dichelobacter nodosus VCS1703A LemA family protein YP_001209694.1 836561 D 246195 CDS YP_001209695.1 146329032 5123460 837137..839041 1 NC_009446.1 identified by match to protein family HMM PF01435; M48 family peptidase 839041 5123460 DNO_0795 Dichelobacter nodosus VCS1703A M48 family peptidase YP_001209695.1 837137 D 246195 CDS YP_001209696.1 146329743 5122691 839131..840561 1 NC_009446.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter 840561 mgtE 5122691 mgtE Dichelobacter nodosus VCS1703A magnesium transporter YP_001209696.1 839131 D 246195 CDS YP_001209697.1 146329189 5123360 840628..841680 1 NC_009446.1 identified by match to protein family HMM PF00368; hydroxymethylglutaryl-coenzyme A reductase 841680 5123360 DNO_0797 Dichelobacter nodosus VCS1703A hydroxymethylglutaryl-coenzyme A reductase YP_001209697.1 840628 D 246195 CDS YP_001209698.1 146329192 5122203 841680..842714 1 NC_009446.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 842714 5122203 DNO_0798 Dichelobacter nodosus VCS1703A isopentenyl pyrophosphate isomerase YP_001209698.1 841680 D 246195 CDS YP_001209699.1 146329885 5123019 842711..843865 1 NC_009446.1 identified by match to protein family HMM PF01154; match to protein family HMM PF08540; match to protein family HMM TIGR01835; hydroxymethylglutaryl-CoA synthase 843865 5123019 DNO_0799 Dichelobacter nodosus VCS1703A hydroxymethylglutaryl-CoA synthase YP_001209699.1 842711 D 246195 CDS YP_001209700.1 146329462 5122156 843862..844920 1 NC_009446.1 identified by match to protein family HMM PF00288; GHMP kinase family protein 844920 5122156 DNO_0800 Dichelobacter nodosus VCS1703A GHMP kinase family protein YP_001209700.1 843862 D 246195 CDS YP_001209701.1 146328983 5122138 844975..845565 1 NC_009446.1 identified by match to protein family HMM PF02627; hypothetical protein 845565 5122138 DNO_0801 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209701.1 844975 D 246195 CDS YP_001209702.1 146329302 5122552 complement(845607..846896) 1 NC_009446.1 identified by match to protein family HMM PF01734; patatin-like phospholipase family protein 846896 5122552 DNO_0802 Dichelobacter nodosus VCS1703A patatin-like phospholipase family protein YP_001209702.1 845607 R 246195 CDS YP_001209703.1 146328758 5122220 847023..847826 1 NC_009446.1 identified by match to protein family HMM PF00459; inositol monophosphatase 847826 5122220 DNO_0803 Dichelobacter nodosus VCS1703A inositol monophosphatase YP_001209703.1 847023 D 246195 CDS YP_001209704.1 146329263 5123227 complement(847837..848061) 1 NC_009446.1 hypothetical protein 848061 5123227 DNO_0804 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209704.1 847837 R 246195 CDS YP_001209705.1 146329650 5122808 complement(848054..849079) 1 NC_009446.1 identified by match to protein family HMM PF02424; thiamine biosynthesis lipoprotein ApbE 849079 5122808 DNO_0805 Dichelobacter nodosus VCS1703A thiamine biosynthesis lipoprotein ApbE YP_001209705.1 848054 R 246195 CDS YP_001209706.1 146329468 5122659 complement(849072..850289) 1 NC_009446.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 850289 nqrF 5122659 nqrF Dichelobacter nodosus VCS1703A Na(+)-translocating NADH-quinone reductase subunit F YP_001209706.1 849072 R 246195 CDS YP_001209707.1 146328889 5122419 complement(850301..850912) 1 NC_009446.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 850912 nqrE 5122419 nqrE Dichelobacter nodosus VCS1703A Na(+)-translocating NADH-quinone reductase subunit E YP_001209707.1 850301 R 246195 CDS YP_001209708.1 146329803 5122887 complement(850912..851613) 1 NC_009446.1 identified by match to protein family HMM PF02508; match to protein family HMM TIGR01939; NADH:ubiquinone oxidoreductase, Na(+)- translocating, D subunit 851613 nqrD 5122887 nqrD Dichelobacter nodosus VCS1703A NADH:ubiquinone oxidoreductase, Na(+)- translocating, D subunit YP_001209708.1 850912 R 246195 CDS YP_001209709.1 146328812 5122466 complement(851606..852454) 1 NC_009446.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 852454 nqrC 5122466 nqrC Dichelobacter nodosus VCS1703A Na(+)-translocating NADH-quinone reductase subunit C YP_001209709.1 851606 R 246195 CDS YP_001209710.1 146329350 5123430 complement(852447..853607) 1 NC_009446.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 853607 nqrB 5123430 nqrB Dichelobacter nodosus VCS1703A Na(+)-translocating NADH-quinone reductase subunit B YP_001209710.1 852447 R 246195 CDS YP_001209711.1 146328727 5122296 complement(853611..854957) 1 NC_009446.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 854957 nqrA 5122296 nqrA Dichelobacter nodosus VCS1703A Na(+)-translocating NADH-quinone reductase subunit A YP_001209711.1 853611 R 246195 CDS YP_001209712.1 146329507 5122124 complement(855132..855509) 1 NC_009446.1 identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 855509 5122124 DNO_0813 Dichelobacter nodosus VCS1703A preprotein translocase subunit SecG YP_001209712.1 855132 R 246195 CDS YP_001209713.1 146328942 5122785 complement(855506..856231) 1 NC_009446.1 identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419; triosephosphate isomerase 856231 tpiA 5122785 tpiA Dichelobacter nodosus VCS1703A triosephosphate isomerase YP_001209713.1 855506 R 246195 CDS YP_001209714.1 146329624 5122651 complement(856224..857579) 1 NC_009446.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455; phosphoglucosamine mutase 857579 glmM 5122651 glmM Dichelobacter nodosus VCS1703A phosphoglucosamine mutase YP_001209714.1 856224 R 246195 CDS YP_001209715.1 146329506 5123400 complement(857585..858979) 1 NC_009446.1 identified by match to protein family HMM PF06965; match to protein family HMM TIGR00773; Na+-H+ antiporter NhaA 858979 nhaA 5123400 nhaA Dichelobacter nodosus VCS1703A Na+-H+ antiporter NhaA YP_001209715.1 857585 R 246195 CDS YP_001209716.1 146329782 5122775 859100..859915 1 NC_009446.1 identified by match to protein family HMM TIGR00965; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 859915 dapD 5122775 dapD Dichelobacter nodosus VCS1703A 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001209716.1 859100 D 246195 CDS YP_001209717.1 146329225 5122441 860060..860533 1 NC_009446.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 860533 5122441 DNO_0818 Dichelobacter nodosus VCS1703A 7-cyano-7-deazaguanine reductase YP_001209717.1 860060 D 246195 CDS YP_001209718.1 146329813 5122933 860549..861223 1 NC_009446.1 identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697; hypothetical protein 861223 5122933 DNO_0820 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209718.1 860549 D 246195 CDS YP_001209719.1 146329664 5123395 complement(861220..862455) 1 NC_009446.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; two-component phosphate sensor PhoR 862455 5123395 DNO_0819 Dichelobacter nodosus VCS1703A two-component phosphate sensor PhoR YP_001209719.1 861220 R 246195 CDS YP_001209720.1 146329557 5122549 complement(862470..863309) 1 NC_009446.1 identified by match to protein family HMM PF00072; response regulator receiver domain-containing protein 863309 5122549 DNO_0821 Dichelobacter nodosus VCS1703A response regulator receiver domain-containing protein YP_001209720.1 862470 R 246195 CDS YP_001209721.1 146329081 5122273 complement(863327..864532) 1 NC_009446.1 identified by match to protein family HMM PF00072; match to protein family HMM PF04002; match to protein family HMM TIGR00608; response regulator receiver domain-containing protein 864532 5122273 DNO_0822 Dichelobacter nodosus VCS1703A response regulator receiver domain-containing protein YP_001209721.1 863327 R 246195 CDS YP_001209722.1 146329824 5122214 864762..865958 1 NC_009446.1 identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 865958 coaBC 5122214 coaBC Dichelobacter nodosus VCS1703A bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_001209722.1 864762 D 246195 CDS YP_001209723.1 146329377 5122840 865939..866403 1 NC_009446.1 identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; deoxyuridine 5'-triphosphate nucleotidohydrolase 866403 5122840 DNO_0824 Dichelobacter nodosus VCS1703A deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001209723.1 865939 D 246195 CDS YP_001209724.1 146329795 5123018 866548..867111 1 NC_009446.1 identified by match to protein family HMM PF01025; co-chaperone GrpE 867111 grpE 5123018 grpE Dichelobacter nodosus VCS1703A co-chaperone GrpE YP_001209724.1 866548 D 246195 CDS YP_001209725.1 146329249 5122459 867220..869148 1 NC_009446.1 identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK 869148 dnaK 5122459 dnaK Dichelobacter nodosus VCS1703A chaperone protein DnaK YP_001209725.1 867220 D 246195 CDS YP_001209726.1 146329470 5123404 869202..870326 1 NC_009446.1 identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ 870326 dnaJ 5123404 dnaJ Dichelobacter nodosus VCS1703A chaperone protein DnaJ YP_001209726.1 869202 D 246195 CDS YP_001209727.1 146328732 5122730 870575..872002 1 NC_009446.1 identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein 872002 agcS 5122730 agcS Dichelobacter nodosus VCS1703A sodium:alanine symporter family protein YP_001209727.1 870575 D 246195 CDS YP_001209728.1 146328702 5122976 complement(872049..872912) 1 NC_009446.1 identified by match to protein family HMM PF00248; aldo/keto reductase family oxidoreductase 872912 5122976 DNO_0829 Dichelobacter nodosus VCS1703A aldo/keto reductase family oxidoreductase YP_001209728.1 872049 R 246195 CDS YP_001209729.1 146329448 5123381 873023..873466 1 NC_009446.1 identified by match to protein family HMM PF03061; acyl-CoA thioester hydrolase 873466 5123381 DNO_0830 Dichelobacter nodosus VCS1703A acyl-CoA thioester hydrolase YP_001209729.1 873023 D 246195 CDS YP_001209730.1 146328930 5122159 complement(873539..874279) 1 NC_009446.1 extracellular solute-binding family protein 874279 5122159 DNO_0831 Dichelobacter nodosus VCS1703A extracellular solute-binding family protein YP_001209730.1 873539 R 246195 CDS YP_001209731.1 146329076 5122703 complement(874341..874697) 1 NC_009446.1 identified by match to protein family HMM PF01883; hypothetical protein 874697 5122703 DNO_0832 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209731.1 874341 R 246195 CDS YP_001209732.1 146329790 5122262 complement(874700..875140) 1 NC_009446.1 identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; NifU family SUF system FeS assembly protein 875140 5122262 DNO_0833 Dichelobacter nodosus VCS1703A NifU family SUF system FeS assembly protein YP_001209732.1 874700 R 246195 CDS YP_001209733.1 146329321 5122454 complement(875137..876351) 1 NC_009446.1 identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; cysteine desulfurase SufS 876351 sufS 5122454 sufS Dichelobacter nodosus VCS1703A cysteine desulfurase SufS YP_001209733.1 875137 R 246195 CDS YP_001209734.1 146329128 5122946 complement(876341..877480) 1 NC_009446.1 identified by match to protein family HMM PF01458; SufD protein 877480 sufD 5122946 sufD Dichelobacter nodosus VCS1703A SufD protein YP_001209734.1 876341 R 246195 CDS YP_001209735.1 146329287 5122666 complement(877477..878235) 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 878235 sufC 5122666 sufC Dichelobacter nodosus VCS1703A FeS assembly ATPase SufC YP_001209735.1 877477 R 246195 CDS YP_001209736.1 146329698 5122360 complement(878266..879720) 1 NC_009446.1 identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB 879720 sufB 5122360 sufB Dichelobacter nodosus VCS1703A FeS assembly protein SufB YP_001209736.1 878266 R 246195 CDS YP_001209737.1 146328986 5122222 complement(879717..880142) 1 NC_009446.1 identified by match to protein family HMM PF02082; match to protein family HMM PF08279; match to protein family HMM TIGR00738; match to protein family HMM TIGR02944; Rrf2 family protein 880142 5122222 DNO_0838 Dichelobacter nodosus VCS1703A Rrf2 family protein YP_001209737.1 879717 R 246195 CDS YP_001209738.1 146328768 5122822 complement(880216..882024) 1 NC_009446.1 identified by match to protein family HMM PF01841; transglutaminase family protein 882024 5122822 DNO_0839 Dichelobacter nodosus VCS1703A transglutaminase family protein YP_001209738.1 880216 R 246195 CDS YP_001209739.1 146329134 5123134 complement(882053..882259) 1 NC_009446.1 hypothetical protein 882259 5123134 DNO_0840 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209739.1 882053 R 246195 CDS YP_001209740.1 146329908 5122927 complement(882246..883202) 1 NC_009446.1 identified by match to protein family HMM PF01882; hypothetical protein 883202 5122927 DNO_0841 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209740.1 882246 R 246195 CDS YP_001209741.1 146329778 5123175 complement(883199..884128) 1 NC_009446.1 identified by match to protein family HMM PF07726; match to protein family HMM PF07728; MoxR family protein 884128 5123175 DNO_0842 Dichelobacter nodosus VCS1703A MoxR family protein YP_001209741.1 883199 R 246195 CDS YP_001209742.1 146329066 5123305 complement(884140..885147) 1 NC_009446.1 identified by match to protein family HMM PF02606; match to protein family HMM TIGR00682; tetraacyldisaccharide 4'-kinase 885147 lpxK 5123305 lpxK Dichelobacter nodosus VCS1703A tetraacyldisaccharide 4'-kinase YP_001209742.1 884140 R 246195 CDS YP_001209743.1 146328936 5123158 885289..886164 1 NC_009446.1 identified by match to protein family HMM PF00293; NUDIX domain-containing protein 886164 5123158 DNO_0844 Dichelobacter nodosus VCS1703A NUDIX domain-containing protein YP_001209743.1 885289 D 246195 CDS YP_001209744.1 146328654 5123272 complement(886623..888140) 1 NC_009446.1 hypothetical protein 888140 5123272 DNO_0847 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209744.1 886623 R 246195 CDS YP_001209745.1 146329500 5122530 complement(888192..889133) 1 NC_009446.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase family protein 889133 5122530 DNO_0848 Dichelobacter nodosus VCS1703A D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_001209745.1 888192 R 246195 CDS YP_001209746.1 146328957 5122690 complement(889209..889814) 1 NC_009446.1 identified by match to protein family HMM PF01914; MarC family membrane protein 889814 5122690 DNO_0849 Dichelobacter nodosus VCS1703A MarC family membrane protein YP_001209746.1 889209 R 246195 CDS YP_001209747.1 146329859 5122557 complement(890077..890484) 1 NC_009446.1 identified by match to protein family HMM PF04386; stringent starvation protein B 890484 5122557 DNO_0850 Dichelobacter nodosus VCS1703A stringent starvation protein B YP_001209747.1 890077 R 246195 CDS YP_001209748.1 146328858 5123050 complement(890525..891172) 1 NC_009446.1 identified by match to protein family HMM PF02798; stringent starvation protein A 891172 5123050 DNO_0851 Dichelobacter nodosus VCS1703A stringent starvation protein A YP_001209748.1 890525 R 246195 CDS YP_001209749.1 146329445 5122588 complement(891273..892016) 1 NC_009446.1 identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein 892016 5122588 DNO_0852 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209749.1 891273 R 246195 CDS YP_001209750.1 146329145 5122155 complement(892016..893275) 1 NC_009446.1 identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1- carboxyvinyltransferase 893275 murA 5122155 murA Dichelobacter nodosus VCS1703A UDP-N-acetylglucosamine 1- carboxyvinyltransferase YP_001209750.1 892016 R 246195 CDS YP_001209751.1 146329310 5122256 complement(893275..893499) 1 NC_009446.1 identified by match to protein family HMM PF01722; BolA family protein 893499 5122256 DNO_0854 Dichelobacter nodosus VCS1703A BolA family protein YP_001209751.1 893275 R 246195 CDS YP_001209752.1 146329837 5122864 complement(893489..893797) 1 NC_009446.1 hypothetical protein 893797 5122864 DNO_0855 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209752.1 893489 R 246195 CDS YP_001209753.1 146329563 5122539 complement(893797..894393) 1 NC_009446.1 identified by match to protein family HMM PF05494; toluene tolerance family protein 894393 5122539 DNO_0856 Dichelobacter nodosus VCS1703A toluene tolerance family protein YP_001209753.1 893797 R 246195 CDS YP_001209754.1 146328852 5122152 complement(894415..895227) 1 NC_009446.1 identified by match to protein family HMM PF02470; mce related family protein 895227 5122152 DNO_0857 Dichelobacter nodosus VCS1703A mce related family protein YP_001209754.1 894415 R 246195 CDS YP_001209755.1 146328846 5122583 complement(895236..896024) 1 NC_009446.1 identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; hypothetical protein 896024 5122583 DNO_0858 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209755.1 895236 R 246195 CDS YP_001209756.1 146329459 5122571 complement(896008..896823) 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 896823 5122571 DNO_0859 Dichelobacter nodosus VCS1703A ABC transporter ATP-binding protein YP_001209756.1 896008 R 246195 CDS YP_001209757.1 146328734 5122746 complement(896848..900942) 1 NC_009446.1 identified by match to protein family HMM PF04357; hypothetical protein 900942 5122746 DNO_0860 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209757.1 896848 R 246195 CDS YP_001209758.1 146329880 5122232 complement(901013..902812) 1 NC_009446.1 identified by match to protein family HMM PF01103; outer membrane protein 902812 5122232 DNO_0861 Dichelobacter nodosus VCS1703A outer membrane protein YP_001209758.1 901013 R 246195 CDS YP_001209759.1 146329174 5123211 complement(902815..904341) 1 NC_009446.1 identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; virulence factor MviN family protein 904341 mviN 5123211 mviN Dichelobacter nodosus VCS1703A virulence factor MviN family protein YP_001209759.1 902815 R 246195 CDS YP_001209760.1 146329233 5123212 complement(904338..905219) 1 NC_009446.1 identified by match to protein family HMM PF02219; 5,10-methylenetetrahydrofolate reductase 905219 metF 5123212 metF Dichelobacter nodosus VCS1703A 5,10-methylenetetrahydrofolate reductase YP_001209760.1 904338 R 246195 CDS YP_001209761.1 146329609 5122842 complement(905194..905433) 1 NC_009446.1 lipoprotein 905433 5122842 DNO_0864 Dichelobacter nodosus VCS1703A lipoprotein YP_001209761.1 905194 R 246195 CDS YP_001209762.1 146329072 5122237 905560..906858 1 NC_009446.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent rna helicase Rhl 906858 5122237 DNO_0865 Dichelobacter nodosus VCS1703A ATP-dependent rna helicase Rhl YP_001209762.1 905560 D 246195 CDS YP_001209763.1 146329279 5122879 complement(906861..907523) 1 NC_009446.1 identified by match to protein family HMM PF00881; nitroreductase family protein 907523 5122879 DNO_0866 Dichelobacter nodosus VCS1703A nitroreductase family protein YP_001209763.1 906861 R 246195 CDS YP_001209764.1 146328699 5123226 complement(907598..908035) 1 NC_009446.1 hypothetical protein 908035 5123226 DNO_0867 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209764.1 907598 R 246195 CDS YP_001209765.1 146329477 5123058 complement(908050..908418) 1 NC_009446.1 identified by match to protein family HMM PF00072; two-component response regulator 908418 5123058 DNO_0868 Dichelobacter nodosus VCS1703A two-component response regulator YP_001209765.1 908050 R 246195 CDS YP_001209766.1 146328741 5122700 complement(908431..910638) 1 NC_009446.1 identified by match to protein family HMM PF01627; match to protein family HMM PF02518; two-component sensor kinase 910638 5122700 DNO_0869 Dichelobacter nodosus VCS1703A two-component sensor kinase YP_001209766.1 908431 R 246195 CDS YP_001209767.1 146329684 5123060 910905..911636 1 NC_009446.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 911636 5123060 DNO_0870 Dichelobacter nodosus VCS1703A glycosyl transferase family protein YP_001209767.1 910905 D 246195 CDS YP_001209768.1 146329791 5123264 911659..912843 1 NC_009446.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; macrolide-specific ABC-type efflux protein 912843 5123264 DNO_0871 Dichelobacter nodosus VCS1703A macrolide-specific ABC-type efflux protein YP_001209768.1 911659 D 246195 CDS YP_001209769.1 146329038 5122455 912843..914777 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02687; macrolide-specific ABC-type efflux carrier protein 914777 5122455 DNO_0872 Dichelobacter nodosus VCS1703A macrolide-specific ABC-type efflux carrier protein YP_001209769.1 912843 D 246195 CDS YP_001209770.1 146329511 5122883 914867..915475 1 NC_009446.1 identified by match to protein family HMM PF04972; lipoprotein 915475 5122883 DNO_0873 Dichelobacter nodosus VCS1703A lipoprotein YP_001209770.1 914867 D 246195 CDS YP_001209771.1 146328924 5122229 915753..917153 1 NC_009446.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 917153 aspA 5122229 aspA Dichelobacter nodosus VCS1703A aspartate ammonia-lyase YP_001209771.1 915753 D 246195 CDS YP_001209772.1 146329515 5122721 917311..918663 1 NC_009446.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle protein 918663 ftsY 5122721 ftsY Dichelobacter nodosus VCS1703A signal recognition particle protein YP_001209772.1 917311 D 246195 CDS YP_001209773.1 146329254 5122485 918682..919575 1 NC_009446.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02392; match to protein family HMM TIGR02937; RNA polymerase sigma-32 factor 919575 rpoH 5122485 rpoH Dichelobacter nodosus VCS1703A RNA polymerase sigma-32 factor YP_001209773.1 918682 D 246195 CDS YP_001209774.1 146329673 5123323 919622..920044 1 NC_009446.1 identified by match to protein family HMM PF01475; ferric uptake regulator 920044 fur 5123323 fur Dichelobacter nodosus VCS1703A ferric uptake regulator YP_001209774.1 919622 D 246195 CDS YP_001209775.1 146329275 5123009 complement(920057..920611) 1 NC_009446.1 hypothetical protein 920611 5123009 DNO_0878 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209775.1 920057 R 246195 CDS YP_001209776.1 146328923 5123240 920640..921359 1 NC_009446.1 identified by match to protein family HMM PF04391; hypothetical protein 921359 5123240 DNO_0879 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209776.1 920640 D 246195 CDS YP_001209777.1 146329505 5122731 921431..922204 1 NC_009446.1 identified by match to protein family HMM PF01226; formate/nitrite transporter family protein 922204 5122731 DNO_0880 Dichelobacter nodosus VCS1703A formate/nitrite transporter family protein YP_001209777.1 921431 D 246195 CDS YP_001209778.1 146329862 5122803 922683..923444 1 NC_009446.1 hypothetical protein 923444 5122803 DNO_0881 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209778.1 922683 D 246195 CDS YP_001209779.1 146329688 5122936 complement(923650..923934) 1 NC_009446.1 identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; ComEA-like protein 923934 5122936 DNO_0882 Dichelobacter nodosus VCS1703A ComEA-like protein YP_001209779.1 923650 R 246195 CDS YP_001209780.1 146328792 5122422 929541..930476 1 NC_009446.1 identified by match to protein family HMM PF01075; heptosyltransferase family protein 930476 5122422 DNO_0888 Dichelobacter nodosus VCS1703A heptosyltransferase family protein YP_001209780.1 929541 D 246195 CDS YP_001209781.1 146329549 5123455 930516..931511 1 NC_009446.1 identified by match to protein family HMM PF01297; high-affinity zinc uptake system protein 931511 znuA 5123455 znuA Dichelobacter nodosus VCS1703A high-affinity zinc uptake system protein YP_001209781.1 930516 D 246195 CDS YP_001209782.1 146328645 5122608 complement(931566..932021) 1 NC_009446.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; type IV fimbrial biogenesis protein 932021 5122608 DNO_0890 Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis protein YP_001209782.1 931566 R 246195 CDS YP_001209783.1 146328842 5123052 complement(932036..932515) 1 NC_009446.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; type IV fimbrial biogenesis protein 932515 5123052 DNO_0891 Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis protein YP_001209783.1 932036 R 246195 CDS YP_001209784.1 146328779 5122568 complement(932517..933182) 1 NC_009446.1 hypothetical protein 933182 5122568 DNO_0892 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209784.1 932517 R 246195 CDS YP_001209785.1 146329267 5123472 complement(933179..934324) 1 NC_009446.1 hypothetical protein 934324 5123472 DNO_0893 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209785.1 933179 R 246195 CDS YP_001209786.1 146329674 5122381 complement(934334..934903) 1 NC_009446.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02523; match to protein family HMM TIGR02532; hypothetical protein 934903 pilV 5122381 pilV Dichelobacter nodosus VCS1703A hypothetical protein YP_001209786.1 934334 R 246195 CDS YP_001209787.1 146329087 5122989 complement(934967..938785) 1 NC_009446.1 type IV fimbrial tip adhesin 938785 pilC 5122989 pilC Dichelobacter nodosus VCS1703A type IV fimbrial tip adhesin YP_001209787.1 934967 R 246195 CDS YP_001209788.1 146329184 5122523 complement(938824..938994) 1 NC_009446.1 hypothetical protein 938994 5122523 DNO_0896 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209788.1 938824 R 246195 CDS YP_001209789.1 146329755 5122403 complement(938961..939563) 1 NC_009446.1 identified by match to protein family HMM PF03099; match to protein family HMM TIGR00214; lipoate-protein ligase B 939563 lipB 5122403 lipB Dichelobacter nodosus VCS1703A lipoate-protein ligase B YP_001209789.1 938961 R 246195 CDS YP_001209790.1 146329114 5123348 complement(939565..939837) 1 NC_009446.1 identified by match to protein family HMM PF04359; hypothetical protein 939837 5123348 DNO_0898 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209790.1 939565 R 246195 CDS YP_001209791.1 146329552 5122660 complement(939848..940975) 1 NC_009446.1 identified by match to protein family HMM PF00768; match to protein family HMM PF07943; D-alanyl-D-alanine carboxypeptidase 940975 5122660 DNO_0899 Dichelobacter nodosus VCS1703A D-alanyl-D-alanine carboxypeptidase YP_001209791.1 939848 R 246195 CDS YP_001209792.1 146329335 5122595 complement(941015..942373) 1 NC_009446.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; two-component sensor kinase 942373 5122595 DNO_0900 Dichelobacter nodosus VCS1703A two-component sensor kinase YP_001209792.1 941015 R 246195 CDS YP_001209793.1 146329260 5122638 complement(942468..943157) 1 NC_009446.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; two-component copper resistance response regulator 943157 5122638 DNO_0901 Dichelobacter nodosus VCS1703A two-component copper resistance response regulator YP_001209793.1 942468 R 246195 CDS YP_001209794.1 146329692 5122811 943264..944667 1 NC_009446.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM PF03510; match to protein family HMM TIGR02037; serine protease 944667 degQ 5122811 degQ Dichelobacter nodosus VCS1703A serine protease YP_001209794.1 943264 D 246195 CDS YP_001209795.1 146328950 5123209 complement(944723..945412) 1 NC_009446.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; two component phosphate response regulator PhoB 945412 5123209 DNO_0903 Dichelobacter nodosus VCS1703A two component phosphate response regulator PhoB YP_001209795.1 944723 R 246195 CDS YP_001209796.1 146329636 5122626 complement(945461..946003) 1 NC_009446.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 946003 orn 5122626 orn Dichelobacter nodosus VCS1703A oligoribonuclease YP_001209796.1 945461 R 246195 CDS YP_001209797.1 146329794 5122896 complement(946052..946711) 1 NC_009446.1 identified by match to protein family HMM PF01648; 4'-phosphopantetheinyl transferase 946711 5122896 DNO_0905 Dichelobacter nodosus VCS1703A 4'-phosphopantetheinyl transferase YP_001209797.1 946052 R 246195 CDS YP_001209798.1 146329568 5122458 complement(946733..947434) 1 NC_009446.1 identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573; match to protein family HMM TIGR01406; DNA polymerase III subunit epsilon 947434 dnaQ 5122458 dnaQ Dichelobacter nodosus VCS1703A DNA polymerase III subunit epsilon YP_001209798.1 946733 R 246195 CDS YP_001209799.1 146328893 5122869 complement(947436..949052) 1 NC_009446.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase 949052 5122869 DNO_0907 Dichelobacter nodosus VCS1703A phosphoglucomutase/phosphomannomutase YP_001209799.1 947436 R 246195 CDS YP_001209800.1 146329086 5122276 complement(949077..950411) 1 NC_009446.1 identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02643; match to protein family HMM TIGR02644; thymidine phosphorylase 950411 deoA 5122276 deoA Dichelobacter nodosus VCS1703A thymidine phosphorylase YP_001209800.1 949077 R 246195 CDS YP_001209801.1 146329685 5123321 complement(950426..951169) 1 NC_009446.1 identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126; deoxyribose-phosphate aldolase 951169 deoC 5123321 deoC Dichelobacter nodosus VCS1703A deoxyribose-phosphate aldolase YP_001209801.1 950426 R 246195 CDS YP_001209802.1 146329250 5123103 complement(951372..953204) 1 NC_009446.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 953204 nrdD 5123103 nrdD Dichelobacter nodosus VCS1703A anaerobic ribonucleoside triphosphate reductase YP_001209802.1 951372 R 246195 CDS YP_001209803.1 146329799 5123403 complement(953201..953683) 1 NC_009446.1 identified by match to protein family HMM TIGR02826; anaerobic ribonucleoside-triphosphate reductase activating protein 953683 nrdG 5123403 nrdG Dichelobacter nodosus VCS1703A anaerobic ribonucleoside-triphosphate reductase activating protein YP_001209803.1 953201 R 246195 CDS YP_001209804.1 146329566 5122463 complement(954066..954485) 1 NC_009446.1 identified by match to protein family HMM PF01479; ribosome-associated heat shock protein 954485 hslR 5122463 hslR Dichelobacter nodosus VCS1703A ribosome-associated heat shock protein YP_001209804.1 954066 R 246195 CDS YP_001209805.1 146328945 5122432 complement(954454..954774) 1 NC_009446.1 identified by match to protein family HMM PF03776; septum formation topological specificity factor MinE superfamily protein 954774 5122432 DNO_0913 Dichelobacter nodosus VCS1703A septum formation topological specificity factor MinE superfamily protein YP_001209805.1 954454 R 246195 CDS YP_001209806.1 146329380 5122646 complement(954771..955592) 1 NC_009446.1 identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968; septum site-determining protein MinD 955592 minD 5122646 minD Dichelobacter nodosus VCS1703A septum site-determining protein MinD YP_001209806.1 954771 R 246195 CDS YP_001209807.1 146328776 5122189 complement(955663..956397) 1 NC_009446.1 identified by match to protein family HMM PF03775; match to protein family HMM TIGR01222; septum formation inhibitor MinC 956397 minC 5122189 minC Dichelobacter nodosus VCS1703A septum formation inhibitor MinC YP_001209807.1 955663 R 246195 CDS YP_001209808.1 146329199 5122985 complement(956427..958292) 1 NC_009446.1 peptidyl-prolyl cis-trans isomerase 958292 5122985 DNO_0916 Dichelobacter nodosus VCS1703A peptidyl-prolyl cis-trans isomerase YP_001209808.1 956427 R 246195 CDS YP_001209809.1 146329616 5122343 complement(958309..959085) 1 NC_009446.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 959085 xth-2 5122343 xth-2 Dichelobacter nodosus VCS1703A exodeoxyribonuclease III YP_001209809.1 958309 R 246195 CDS YP_001209810.1 146329039 5123292 959111..959776 1 NC_009446.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 959776 pyrE 5123292 pyrE Dichelobacter nodosus VCS1703A orotate phosphoribosyltransferase YP_001209810.1 959111 D 246195 CDS YP_001209811.1 146329518 5122346 complement(959773..961338) 1 NC_009446.1 identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 961338 purH 5122346 purH Dichelobacter nodosus VCS1703A phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001209811.1 959773 R 246195 CDS YP_001209812.1 146328820 5122531 961477..963669 1 NC_009446.1 identified by match to protein family HMM PF03968; match to protein family HMM PF04453; organic solvent tolerance protein 963669 ostA 5122531 ostA Dichelobacter nodosus VCS1703A organic solvent tolerance protein YP_001209812.1 961477 D 246195 CDS YP_001209813.1 146329550 5123421 963691..964956 1 NC_009446.1 identified by match to protein family HMM PF00639; match to protein family HMM PF09312; PpiC-type peptidylprolyl cis-trans isomerase 964956 5123421 DNO_0921 Dichelobacter nodosus VCS1703A PpiC-type peptidylprolyl cis-trans isomerase YP_001209813.1 963691 D 246195 CDS YP_001209814.1 146329356 5122599 964953..965744 1 NC_009446.1 identified by match to protein family HMM PF00398; match to protein family HMM TIGR00755; rRNA adenine dimethylase 965744 ksgA 5122599 ksgA Dichelobacter nodosus VCS1703A rRNA adenine dimethylase YP_001209814.1 964953 D 246195 CDS YP_001209815.1 146329536 5122309 965741..966478 1 NC_009446.1 identified by match to protein family HMM PF00106; short chain dehydrogenase family protein 966478 5122309 DNO_0923 Dichelobacter nodosus VCS1703A short chain dehydrogenase family protein YP_001209815.1 965741 D 246195 CDS YP_001209816.1 146329729 5122597 complement(966530..967321) 1 NC_009446.1 protein disulfide isomerase 967321 dsbG 5122597 dsbG Dichelobacter nodosus VCS1703A protein disulfide isomerase YP_001209816.1 966530 R 246195 CDS YP_001209817.1 146329690 5123399 complement(967525..967971) 1 NC_009446.1 identified by match to protein family HMM PF00149; phosphoesterase domain-containing protein 967971 5123399 DNO_0925 Dichelobacter nodosus VCS1703A phosphoesterase domain-containing protein YP_001209817.1 967525 R 246195 CDS YP_001209818.1 146328818 5122960 968175..968483 1 NC_009446.1 identified by match to protein family HMM PF01817; chorismate mutase family protein 968483 5122960 DNO_0926 Dichelobacter nodosus VCS1703A chorismate mutase family protein YP_001209818.1 968175 D 246195 CDS YP_001209819.1 146329708 5123423 complement(968588..968698) 1 NC_009446.1 hypothetical protein 968698 5123423 DNO_0927 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209819.1 968588 R 246195 CDS YP_001209820.1 146329770 5123192 968792..969748 1 NC_009446.1 identified by match to protein family HMM PF04228; hypothetical protein 969748 5123192 DNO_0928 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209820.1 968792 D 246195 CDS YP_001209821.1 146329299 5123333 969820..970653 1 NC_009446.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxal kinase 970653 pdxK 5123333 pdxK Dichelobacter nodosus VCS1703A pyridoxal kinase YP_001209821.1 969820 D 246195 CDS YP_001209822.1 146329786 5122512 971004..972782 1 NC_009446.1 hypothetical protein 972782 5122512 DNO_0930 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209822.1 971004 D 246195 CDS YP_001209823.1 146329387 5122446 972997..974520 1 NC_009446.1 identified by match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM PF06808; C4-dicarboxylate anaerobic carrier 974520 dcuC 5122446 dcuC Dichelobacter nodosus VCS1703A C4-dicarboxylate anaerobic carrier YP_001209823.1 972997 D 246195 CDS YP_001209824.1 146329323 5122270 complement(974590..975408) 1 NC_009446.1 identified by match to protein family HMM PF02110; hydroxyethylthiazole kinase 975408 5122270 DNO_0932 Dichelobacter nodosus VCS1703A hydroxyethylthiazole kinase YP_001209824.1 974590 R 246195 CDS YP_001209825.1 146329319 5122664 complement(975405..975833) 1 NC_009446.1 identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 975833 rimI 5122664 rimI Dichelobacter nodosus VCS1703A ribosomal-protein-alanine acetyltransferase YP_001209825.1 975405 R 246195 CDS YP_001209826.1 146329154 5122924 complement(975852..977873) 1 NC_009446.1 identified by match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399; methionyl-tRNA synthetase 977873 metG 5122924 metG Dichelobacter nodosus VCS1703A methionyl-tRNA synthetase YP_001209826.1 975852 R 246195 CDS YP_001209827.1 146329895 5122997 978028..978498 1 NC_009446.1 identified by match to protein family HMM PF02590; match to protein family HMM TIGR00246; hypothetical protein 978498 5122997 DNO_0935 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209827.1 978028 D 246195 CDS YP_001209828.1 146328827 5123244 978558..979424 1 NC_009446.1 identified by match to protein family HMM PF00571; match to protein family HMM PF03471; transporter associated domain-containing protein 979424 5123244 DNO_0936 Dichelobacter nodosus VCS1703A transporter associated domain-containing protein YP_001209828.1 978558 D 246195 CDS YP_001209829.1 146329591 5123412 complement(979440..980330) 1 NC_009446.1 identified by match to protein family HMM PF03734; hypothetical protein 980330 5123412 DNO_0937 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209829.1 979440 R 246195 CDS YP_001209830.1 146328872 5122266 complement(980358..981854) 1 NC_009446.1 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysyl-tRNA synthetase 981854 lysS 5122266 lysS Dichelobacter nodosus VCS1703A lysyl-tRNA synthetase YP_001209830.1 980358 R 246195 CDS YP_001209831.1 146328937 5122259 complement(981851..982768) 1 NC_009446.1 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 982768 prfB 5122259 prfB Dichelobacter nodosus VCS1703A peptide chain release factor 2 YP_001209831.1 981851 R 246195 CDS YP_001209832.1 146329344 5122676 983126..984391 1 NC_009446.1 identified by match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; phosphoribosylglycinamide synthetase 984391 purD 5122676 purD Dichelobacter nodosus VCS1703A phosphoribosylglycinamide synthetase YP_001209832.1 983126 D 246195 CDS YP_001209833.1 146329161 5123071 984388..985398 1 NC_009446.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 985398 galE 5123071 galE Dichelobacter nodosus VCS1703A UDP-glucose 4-epimerase YP_001209833.1 984388 D 246195 CDS YP_001209834.1 146329867 5123150 complement(985431..986168) 1 NC_009446.1 identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein 986168 5123150 DNO_0942 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209834.1 985431 R 246195 CDS YP_001209835.1 146329172 5123285 986413..987147 1 NC_009446.1 hypothetical protein 987147 5123285 DNO_0944 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209835.1 986413 D 246195 CDS YP_001209836.1 146329727 5122305 complement(987190..988236) 1 NC_009446.1 identified by match to protein family HMM PF00348; polyprenyl synthase 988236 5122305 DNO_0945 Dichelobacter nodosus VCS1703A polyprenyl synthase YP_001209836.1 987190 R 246195 CDS YP_001209837.1 146328997 5123176 complement(988585..989937) 1 NC_009446.1 identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; match to protein family HMM TIGR00650; tRNA modification GTPase TrmE 989937 trmE 5123176 trmE Dichelobacter nodosus VCS1703A tRNA modification GTPase TrmE YP_001209837.1 988585 R 246195 CDS YP_001209838.1 146328851 5122705 complement(989934..991568) 1 NC_009446.1 identified by match to protein family HMM PF02096; preprotein translocase subunit YidC 991568 5122705 DNO_0949 Dichelobacter nodosus VCS1703A preprotein translocase subunit YidC YP_001209838.1 989934 R 246195 CDS YP_001209839.1 146329657 5122589 complement(991558..991794) 1 NC_009446.1 identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 991794 5122589 DNO_0950 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209839.1 991558 R 246195 CDS YP_001209840.1 146329543 5122563 complement(991791..992141) 1 NC_009446.1 identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 992141 rnpA 5122563 rnpA Dichelobacter nodosus VCS1703A ribonuclease P protein component YP_001209840.1 991791 R 246195 CDS YP_001209841.1 146329485 5122661 complement(992144..992281) 1 NC_009446.1 identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; 50S ribosomal protein L34 992281 rpmH 5122661 rpmH Dichelobacter nodosus VCS1703A 50S ribosomal protein L34 YP_001209841.1 992144 R 246195 CDS YP_001209842.1 146328633 5122653 complement(992387..992992) 1 NC_009446.1 identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR 992992 recR 5122653 recR Dichelobacter nodosus VCS1703A recombination protein RecR YP_001209842.1 992387 R 246195 CDS YP_001209843.1 146329367 5122470 complement(992993..993319) 1 NC_009446.1 identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 993319 5122470 DNO_0954 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209843.1 992993 R 246195 CDS YP_001209844.1 146328966 5122913 complement(993316..995313) 1 NC_009446.1 identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III subunits gamma and tau 995313 dnaX 5122913 dnaX Dichelobacter nodosus VCS1703A DNA polymerase III subunits gamma and tau YP_001209844.1 993316 R 246195 CDS YP_001209845.1 146329639 5122706 complement(995520..996956) 1 NC_009446.1 hypothetical protein 996956 5122706 DNO_0956 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209845.1 995520 R 246195 CDS YP_001209846.1 146328837 5122430 complement(996965..997558) 1 NC_009446.1 identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052; ADP-ribose pyrophosphatase 997558 5122430 DNO_0957 Dichelobacter nodosus VCS1703A ADP-ribose pyrophosphatase YP_001209846.1 996965 R 246195 CDS YP_001209847.1 146329446 5123468 complement(997560..998261) 1 NC_009446.1 identified by match to protein family HMM PF01476; match to protein family HMM PF01551; lipoprotein 998261 5123468 DNO_0958 Dichelobacter nodosus VCS1703A lipoprotein YP_001209847.1 997560 R 246195 CDS YP_001209848.1 146329293 5122395 complement(998258..999010) 1 NC_009446.1 identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087; acid phosphatase SurE 999010 surE 5122395 surE Dichelobacter nodosus VCS1703A acid phosphatase SurE YP_001209848.1 998258 R 246195 CDS YP_001209849.1 146328834 5122508 999154..999804 1 NC_009446.1 hypothetical protein 999804 5122508 DNO_0960 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209849.1 999154 D 246195 CDS YP_001209850.1 146329100 5123445 complement(999808..1000410) 1 NC_009446.1 identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; lipoprotein A domain-containing protein 1000410 5123445 DNO_0961 Dichelobacter nodosus VCS1703A lipoprotein A domain-containing protein YP_001209850.1 999808 R 246195 CDS YP_001209851.1 146328892 5122294 complement(1000429..1001445) 1 NC_009446.1 identified by match to protein family HMM TIGR02282; membrane-bound lytic murein transglycosylase 1001445 5122294 DNO_0962 Dichelobacter nodosus VCS1703A membrane-bound lytic murein transglycosylase YP_001209851.1 1000429 R 246195 CDS YP_001209852.1 146329271 5122920 complement(1001442..1002566) 1 NC_009446.1 identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape determining protein 1002566 rodA 5122920 rodA Dichelobacter nodosus VCS1703A rod shape determining protein YP_001209852.1 1001442 R 246195 CDS YP_001209853.1 146329826 5123253 complement(1002563..1004455) 1 NC_009446.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 2 1004455 5123253 DNO_0964 Dichelobacter nodosus VCS1703A penicillin-binding protein 2 YP_001209853.1 1002563 R 246195 CDS YP_001209854.1 146328726 5122286 complement(1004448..1004927) 1 NC_009446.1 hypothetical protein 1004927 5122286 DNO_0965 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209854.1 1004448 R 246195 CDS YP_001209855.1 146329301 5122484 complement(1004927..1005799) 1 NC_009446.1 identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219; rod shape-determining protein MreC 1005799 mreC 5122484 mreC Dichelobacter nodosus VCS1703A rod shape-determining protein MreC YP_001209855.1 1004927 R 246195 CDS YP_001209856.1 146328763 5122308 complement(1005801..1006850) 1 NC_009446.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1006850 mreB 5122308 mreB Dichelobacter nodosus VCS1703A rod shape-determining protein MreB YP_001209856.1 1005801 R 246195 CDS YP_001209857.1 146328910 5122882 1007043..1007333 1 NC_009446.1 identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135; glutamyl-tRNA(Gln) amidotransferase subunit C 1007333 gatC 5122882 gatC Dichelobacter nodosus VCS1703A glutamyl-tRNA(Gln) amidotransferase subunit C YP_001209857.1 1007043 D 246195 CDS YP_001209858.1 146329478 5122769 1007336..1008799 1 NC_009446.1 identified by match to protein family HMM PF01425; match to protein family HMM TIGR00132; glutamyl-tRNA(Gln) amidotransferase subunit A 1008799 gatA 5122769 gatA Dichelobacter nodosus VCS1703A glutamyl-tRNA(Gln) amidotransferase subunit A YP_001209858.1 1007336 D 246195 CDS YP_001209859.1 146328839 5122697 complement(1008813..1010708) 1 NC_009446.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1010708 5122697 DNO_0970 Dichelobacter nodosus VCS1703A ABC transporter ATP-binding protein YP_001209859.1 1008813 R 246195 CDS YP_001209860.1 146329397 5123316 complement(1010709..1011857) 1 NC_009446.1 identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; S-adenosylmethionine synthetase 1011857 metK 5123316 metK Dichelobacter nodosus VCS1703A S-adenosylmethionine synthetase YP_001209860.1 1010709 R 246195 CDS YP_001209861.1 146328670 5123189 complement(1011854..1012261) 1 NC_009446.1 identified by match to protein family HMM PF00293; NUDIX domain-containing protein 1012261 5123189 DNO_0972 Dichelobacter nodosus VCS1703A NUDIX domain-containing protein YP_001209861.1 1011854 R 246195 CDS YP_001209862.1 146329168 5122944 complement(1012258..1014978) 1 NC_009446.1 identified by match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; Preprotein translocase subunit SecA 1014978 secA 5122944 secA Dichelobacter nodosus VCS1703A Preprotein translocase subunit SecA YP_001209862.1 1012258 R 246195 CDS YP_001209863.1 146329728 5123284 1015031..1015564 1 NC_009446.1 hypothetical protein 1015564 5123284 DNO_0974 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209863.1 1015031 D 246195 CDS YP_001209864.1 146328867 5122218 complement(1015617..1016546) 1 NC_009446.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1016546 lpxC 5122218 lpxC Dichelobacter nodosus VCS1703A UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001209864.1 1015617 R 246195 CDS YP_001209865.1 146329178 5122912 complement(1016548..1017717) 1 NC_009446.1 identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 1017717 ftsZ 5122912 ftsZ Dichelobacter nodosus VCS1703A cell division protein FtsZ YP_001209865.1 1016548 R 246195 CDS YP_001209866.1 146328790 5122436 complement(1017734..1018954) 1 NC_009446.1 identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 1018954 ftsA 5122436 ftsA Dichelobacter nodosus VCS1703A cell division protein FtsA YP_001209866.1 1017734 R 246195 CDS YP_001209867.1 146329679 5123457 complement(1018972..1019751) 1 NC_009446.1 identified by match to protein family HMM PF03799; match to protein family HMM PF08478; cell division protein FtsQ 1019751 5123457 DNO_0978 Dichelobacter nodosus VCS1703A cell division protein FtsQ YP_001209867.1 1018972 R 246195 CDS YP_001209868.1 146329245 5123142 complement(1019790..1020722) 1 NC_009446.1 identified by match to protein family HMM PF01820; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-alanine-D-alanine ligase 1020722 5123142 DNO_0979 Dichelobacter nodosus VCS1703A D-alanine-D-alanine ligase YP_001209868.1 1019790 R 246195 CDS YP_001209869.1 146329426 5123162 complement(1020730..1022166) 1 NC_009446.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082; UDP-N-acetylmuramate-alanine ligase 1022166 murC 5123162 murC Dichelobacter nodosus VCS1703A UDP-N-acetylmuramate-alanine ligase YP_001209869.1 1020730 R 246195 CDS YP_001209870.1 146328685 5123222 complement(1022163..1023254) 1 NC_009446.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1023254 murG 5123222 murG Dichelobacter nodosus VCS1703A undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001209870.1 1022163 R 246195 CDS YP_001209871.1 146329529 5122254 complement(1023251..1024444) 1 NC_009446.1 identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell division protein FtsW 1024444 ftsW 5122254 ftsW Dichelobacter nodosus VCS1703A cell division protein FtsW YP_001209871.1 1023251 R 246195 CDS YP_001209872.1 146328783 5122632 complement(1024428..1025738) 1 NC_009446.1 identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1025738 murD 5122632 murD Dichelobacter nodosus VCS1703A UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_001209872.1 1024428 R 246195 CDS YP_001209873.1 146329258 5123465 complement(1025749..1026831) 1 NC_009446.1 identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase 1026831 mraY 5123465 mraY Dichelobacter nodosus VCS1703A phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001209873.1 1025749 R 246195 CDS YP_001209874.1 146329801 5122813 complement(1026834..1028168) 1 NC_009446.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1028168 murF 5122813 murF Dichelobacter nodosus VCS1703A UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_001209874.1 1026834 R 246195 CDS YP_001209875.1 146329007 5122465 complement(1028165..1029613) 1 NC_009446.1 identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01085; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase 1029613 murE 5122465 murE Dichelobacter nodosus VCS1703A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase YP_001209875.1 1028165 R 246195 CDS YP_001209876.1 146328649 5122783 complement(1029597..1031474) 1 NC_009446.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; cell division protein FtsI 1031474 ftsI 5122783 ftsI Dichelobacter nodosus VCS1703A cell division protein FtsI YP_001209876.1 1029597 R 246195 CDS YP_001209877.1 146329162 5123195 complement(1031477..1031740) 1 NC_009446.1 hypothetical protein 1031740 5123195 DNO_0988 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209877.1 1031477 R 246195 CDS YP_001209878.1 146328861 5122385 complement(1031737..1032663) 1 NC_009446.1 identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 1032663 mraW 5122385 mraW Dichelobacter nodosus VCS1703A S-adenosyl-methyltransferase MraW YP_001209878.1 1031737 R 246195 CDS YP_001209879.1 146329110 5122587 complement(1032738..1033013) 1 NC_009446.1 identified by match to protein family HMM PF03658; hypothetical protein 1033013 5122587 DNO_0990 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209879.1 1032738 R 246195 CDS YP_001209880.1 146329658 5122681 complement(1033000..1033431) 1 NC_009446.1 identified by match to protein family HMM PF03364; aromatic-rich family protein 1033431 5122681 DNO_0991 Dichelobacter nodosus VCS1703A aromatic-rich family protein YP_001209880.1 1033000 R 246195 CDS YP_001209881.1 146329096 5122564 1033490..1033969 1 NC_009446.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1033969 smpB 5122564 smpB Dichelobacter nodosus VCS1703A SsrA-binding protein YP_001209881.1 1033490 D 246195 CDS YP_001209882.1 146329677 5122750 1033966..1034673 1 NC_009446.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 1034673 5122750 DNO_0993 Dichelobacter nodosus VCS1703A metallo-beta-lactamase superfamily protein YP_001209882.1 1033966 D 246195 CDS YP_001209883.1 146328760 5122401 1034687..1035442 1 NC_009446.1 identified by match to protein family HMM PF00497; extracellular solute-binding fmaily protein 1035442 5122401 DNO_0994 Dichelobacter nodosus VCS1703A extracellular solute-binding fmaily protein YP_001209883.1 1034687 D 246195 CDS YP_001209884.1 146329342 5122415 complement(1036550..1036777) 1 NC_009446.1 hypothetical protein 1036777 5122415 DNO_0996 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209884.1 1036550 R 246195 CDS YP_001209885.1 146329149 5122890 complement(1036922..1037395) 1 NC_009446.1 putative lipoprotein 1037395 5122890 DNO_0997 Dichelobacter nodosus VCS1703A putative lipoprotein YP_001209885.1 1036922 R 246195 CDS YP_001209886.1 146329875 5123245 complement(1037426..1038346) 1 NC_009446.1 identified by match to protein family HMM PF03279; lipid A biosynthesis lauroyl acyltransferase 1038346 5123245 DNO_0998 Dichelobacter nodosus VCS1703A lipid A biosynthesis lauroyl acyltransferase YP_001209886.1 1037426 R 246195 CDS YP_001209887.1 146329592 5123179 1038413..1039000 1 NC_009446.1 identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; Maf-like protein 1039000 maf-2 5123179 maf-2 Dichelobacter nodosus VCS1703A Maf-like protein YP_001209887.1 1038413 D 246195 CDS YP_001209888.1 146329644 5122173 complement(1038947..1039918) 1 NC_009446.1 identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706; SspA family peptidase 1039918 5122173 DNO_0999 Dichelobacter nodosus VCS1703A SspA family peptidase YP_001209888.1 1038947 R 246195 CDS YP_001209889.1 146328747 5122123 complement(1039922..1040863) 1 NC_009446.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase, RluC 1040863 rluC 5122123 rluC Dichelobacter nodosus VCS1703A ribosomal large subunit pseudouridine synthase, RluC YP_001209889.1 1039922 R 246195 CDS YP_001209890.1 146329147 5123273 complement(1040981..1042696) 1 NC_009446.1 identified by match to protein family HMM PF00501; long-chain-fatty-acid--CoA ligase 1042696 5123273 DNO_1002 Dichelobacter nodosus VCS1703A long-chain-fatty-acid--CoA ligase YP_001209890.1 1040981 R 246195 CDS YP_001209891.1 146329699 5122825 1042891..1043970 1 NC_009446.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1043970 5122825 DNO_1003 Dichelobacter nodosus VCS1703A phospho-2-dehydro-3-deoxyheptonate aldolase YP_001209891.1 1042891 D 246195 CDS YP_001209892.1 146329257 5122472 1044005..1044574 1 NC_009446.1 identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; hypothetical protein 1044574 5122472 DNO_1004 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209892.1 1044005 D 246195 CDS YP_001209893.1 146329381 5122814 1044577..1045068 1 NC_009446.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 1045068 coaD 5122814 coaD Dichelobacter nodosus VCS1703A pantetheine-phosphate adenylyltransferase YP_001209893.1 1044577 D 246195 CDS YP_001209894.1 146328710 5122397 1045128..1045349 1 NC_009446.1 lipoprotein 1045349 5122397 DNO_1006 Dichelobacter nodosus VCS1703A lipoprotein YP_001209894.1 1045128 D 246195 CDS YP_001209895.1 146329741 5123114 1045499..1045753 1 NC_009446.1 identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; 30S ribosomal protein S16 1045753 rpsP 5123114 rpsP Dichelobacter nodosus VCS1703A 30S ribosomal protein S16 YP_001209895.1 1045499 D 246195 CDS YP_001209896.1 146329006 5123362 1045753..1046280 1 NC_009446.1 identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 1046280 5123362 DNO_1008 Dichelobacter nodosus VCS1703A 16S rRNA processing protein RimM YP_001209896.1 1045753 D 246195 CDS YP_001209897.1 146328904 5122791 1046243..1047022 1 NC_009446.1 identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N1-)-methyltransferase 1047022 trmD 5122791 trmD Dichelobacter nodosus VCS1703A tRNA (guanine-N1-)-methyltransferase YP_001209897.1 1046243 D 246195 CDS YP_001209898.1 146329602 5122786 1047022..1047384 1 NC_009446.1 identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024; 50S ribosomal protein L19 1047384 rplS 5122786 rplS Dichelobacter nodosus VCS1703A 50S ribosomal protein L19 YP_001209898.1 1047022 D 246195 CDS YP_001209899.1 146328679 5123017 1047404..1048216 1 NC_009446.1 identified by match to protein family HMM PF00459; 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 1048216 cysQ 5123017 cysQ Dichelobacter nodosus VCS1703A 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_001209899.1 1047404 D 246195 CDS YP_001209900.1 146329124 5123169 1048295..1049479 1 NC_009446.1 identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988; hypothetical protein 1049479 5123169 DNO_1013 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209900.1 1048295 D 246195 CDS YP_001209901.1 146329691 5122600 complement(1049468..1049596) 1 NC_009446.1 hypothetical protein 1049596 5122600 DNO_1012 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209901.1 1049468 R 246195 CDS YP_001209902.1 146329569 5123296 1049706..1050176 1 NC_009446.1 hypothetical protein 1050176 5123296 DNO_1014 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209902.1 1049706 D 246195 CDS YP_001209903.1 146328863 5122922 1050212..1050886 1 NC_009446.1 identified by match to protein family HMM PF00702; hypothetical protein 1050886 5122922 DNO_1015 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209903.1 1050212 D 246195 CDS YP_001209904.1 146329447 5122878 complement(1050980..1051342) 1 NC_009446.1 lipoprotein 1051342 5122878 DNO_1016 Dichelobacter nodosus VCS1703A lipoprotein YP_001209904.1 1050980 R 246195 CDS YP_001209905.1 146329248 5122264 1051702..1053030 1 NC_009446.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase 1053030 5122264 DNO_1017 Dichelobacter nodosus VCS1703A ATP-dependent RNA helicase YP_001209905.1 1051702 D 246195 CDS YP_001209906.1 146329601 5123405 complement(1053104..1055158) 1 NC_009446.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM PF04851; match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG 1055158 recG 5123405 recG Dichelobacter nodosus VCS1703A ATP-dependent DNA helicase RecG YP_001209906.1 1053104 R 246195 CDS YP_001209907.1 146329197 5122323 complement(1055161..1055544) 1 NC_009446.1 identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP 1055544 5122323 DNO_1019 Dichelobacter nodosus VCS1703A endoribonuclease L-PSP YP_001209907.1 1055161 R 246195 CDS YP_001209908.1 146329394 5123035 complement(1055571..1057742) 1 NC_009446.1 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase 1057742 spoT 5123035 spoT Dichelobacter nodosus VCS1703A guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase YP_001209908.1 1055571 R 246195 CDS YP_001209909.1 146329466 5122279 complement(1057747..1057980) 1 NC_009446.1 identified by match to protein family HMM PF01192; match to protein family HMM TIGR00690; DNA-directed RNA polymerase subunit omega 1057980 rpoZ 5122279 rpoZ Dichelobacter nodosus VCS1703A DNA-directed RNA polymerase subunit omega YP_001209909.1 1057747 R 246195 CDS YP_001209910.1 146328897 5122141 complement(1058076..1058942) 1 NC_009446.1 identified by match to protein family HMM PF02219; methylenetetrahydrofolate reductase family protein 1058942 5122141 DNO_1022 Dichelobacter nodosus VCS1703A methylenetetrahydrofolate reductase family protein YP_001209910.1 1058076 R 246195 CDS YP_001209911.1 146328757 5122950 complement(1058954..1059592) 1 NC_009446.1 identified by match to protein family HMM PF01243; match to protein family HMM TIGR00558; pyridoxamine 5'-phosphate oxidase 1059592 pdxH 5122950 pdxH Dichelobacter nodosus VCS1703A pyridoxamine 5'-phosphate oxidase YP_001209911.1 1058954 R 246195 CDS YP_001209912.1 146329905 5123090 complement(1059593..1060873) 1 NC_009446.1 identified by match to protein family HMM PF00202; match to protein family HMM PF01212; match to protein family HMM TIGR00713; glutamate-1-semialdehyde-2,1-aminomutase 1060873 hemL 5123090 hemL Dichelobacter nodosus VCS1703A glutamate-1-semialdehyde-2,1-aminomutase YP_001209912.1 1059593 R 246195 CDS YP_001209913.1 146329107 5122136 1061089..1061355 1 NC_009446.1 identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; 30S ribosomal protein S20 1061355 rpsT 5122136 rpsT Dichelobacter nodosus VCS1703A 30S ribosomal protein S20 YP_001209913.1 1061089 D 246195 CDS YP_001209914.1 146329370 5122921 1061547..1063310 1 NC_009446.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 1063310 frdA 5122921 frdA Dichelobacter nodosus VCS1703A fumarate reductase flavoprotein subunit YP_001209914.1 1061547 D 246195 CDS YP_001209915.1 146329285 5122280 1063323..1064069 1 NC_009446.1 identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; fumarate reductase, iron-sulfur protein 1064069 frdB 5122280 frdB Dichelobacter nodosus VCS1703A fumarate reductase, iron-sulfur protein YP_001209915.1 1063323 D 246195 CDS YP_001209916.1 146328631 5122358 1064071..1064463 1 NC_009446.1 fumarate reductase subunit C 1064463 frdC 5122358 frdC Dichelobacter nodosus VCS1703A fumarate reductase subunit C YP_001209916.1 1064071 D 246195 CDS YP_001209917.1 146328804 5122923 1064476..1064826 1 NC_009446.1 fumarate reductase, subunit D 1064826 5122923 DNO_1029 Dichelobacter nodosus VCS1703A fumarate reductase, subunit D YP_001209917.1 1064476 D 246195 CDS YP_001209918.1 146329805 5123440 complement(1064873..1065475) 1 NC_009446.1 hypothetical protein 1065475 5123440 DNO_1030 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209918.1 1064873 R 246195 CDS YP_001209919.1 146329113 5122468 1065660..1066667 1 NC_009446.1 identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; heptosyl transferase I 1066667 5122468 DNO_1031 Dichelobacter nodosus VCS1703A heptosyl transferase I YP_001209919.1 1065660 D 246195 CDS YP_001209920.1 146329845 5122657 1066780..1067463 1 NC_009446.1 identified by match to protein family HMM PF02146; Sir2 family NAD-dependent deacetylase 1067463 5122657 DNO_1032 Dichelobacter nodosus VCS1703A Sir2 family NAD-dependent deacetylase YP_001209920.1 1066780 D 246195 CDS YP_001209921.1 146329494 5122170 1067411..1067581 1 NC_009446.1 hypothetical protein 1067581 5122170 DNO_1033 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209921.1 1067411 D 246195 CDS YP_001209922.1 146328931 5122902 1067601..1069598 1 NC_009446.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease family protein 1069598 5122902 DNO_1034 Dichelobacter nodosus VCS1703A carboxyl-terminal protease family protein YP_001209922.1 1067601 D 246195 CDS YP_001209923.1 146329648 5122692 1069608..1071608 1 NC_009446.1 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 1071608 tkt 5122692 tkt Dichelobacter nodosus VCS1703A transketolase YP_001209923.1 1069608 D 246195 CDS YP_001209924.1 146329094 5122225 1071624..1072781 1 NC_009446.1 identified by match to protein family HMM PF00162; phosphoglycerate kinase 1072781 pgk 5122225 pgk Dichelobacter nodosus VCS1703A phosphoglycerate kinase YP_001209924.1 1071624 D 246195 CDS YP_001209925.1 146329316 5122215 1072982..1074121 1 NC_009446.1 hypothetical protein 1074121 5122215 DNO_1037 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209925.1 1072982 D 246195 CDS YP_001209926.1 146329142 5122520 complement(1074787..1075281) 1 NC_009446.1 integrase B2 1075281 intB2 5122520 intB2 Dichelobacter nodosus VCS1703A integrase B2 YP_001209926.1 1074787 R 246195 CDS YP_001209927.1 146329876 5123051 1075849..1076208 1 NC_009446.1 identified by match to protein family HMM PF05015; plasmid maintenance system killer family protein ToxA2 1076208 toxA2 5123051 toxA2 Dichelobacter nodosus VCS1703A plasmid maintenance system killer family protein ToxA2 YP_001209927.1 1075849 D 246195 CDS YP_001209928.1 146328843 5122129 1076221..1076529 1 NC_009446.1 identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein VapA3 1076529 vapA3 5122129 vapA3 Dichelobacter nodosus VCS1703A virulence-associated protein VapA3 YP_001209928.1 1076221 D 246195 CDS YP_001209929.1 146329395 5122574 1076865..1077095 1 NC_009446.1 identified by match to protein family HMM PF04014; virulence-associated protein VapB2 1077095 vapB2 5122574 vapB2 Dichelobacter nodosus VCS1703A virulence-associated protein VapB2 YP_001209929.1 1076865 D 246195 CDS YP_001209930.1 146329453 5122433 1077092..1077499 1 NC_009446.1 identified by match to protein family HMM PF01850; virulence-associated protein VapC2 1077499 vapC2 5122433 vapC2 Dichelobacter nodosus VCS1703A virulence-associated protein VapC2 YP_001209930.1 1077092 D 246195 CDS YP_001209931.1 146328894 5122948 complement(1079043..1080356) 1 NC_009446.1 identified by match to protein family HMM PF05272; virulence-associated protein VapE3 1080356 vapE3 5122948 vapE3 Dichelobacter nodosus VCS1703A virulence-associated protein VapE3 YP_001209931.1 1079043 R 246195 CDS YP_001209932.1 146329078 5122260 complement(1080452..1080673) 1 NC_009446.1 virulence-associated protein VapG3 1080673 vapG3 5122260 vapG3 Dichelobacter nodosus VCS1703A virulence-associated protein VapG3 YP_001209932.1 1080452 R 246195 CDS YP_001209933.1 146329800 5123205 complement(1081068..1082273) 1 NC_009446.1 identified by match to protein family HMM PF00589; integrase A2 1082273 intA2 5123205 intA2 Dichelobacter nodosus VCS1703A integrase A2 YP_001209933.1 1081068 R 246195 CDS YP_001209934.1 146329836 5122352 complement(1082578..1084659) 1 NC_009446.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase 1084659 pnp 5122352 pnp Dichelobacter nodosus VCS1703A polynucleotide phosphorylase/polyadenylase YP_001209934.1 1082578 R 246195 CDS YP_001209935.1 146329284 5122535 complement(1084678..1084944) 1 NC_009446.1 identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 1084944 rpsO 5122535 rpsO Dichelobacter nodosus VCS1703A 30S ribosomal protein S15 YP_001209935.1 1084678 R 246195 CDS YP_001209936.1 146329318 5123213 complement(1085038..1085559) 1 NC_009446.1 identified by match to protein family HMM PF00127; match to protein family HMM TIGR02695; azurin 1085559 azu 5123213 azu Dichelobacter nodosus VCS1703A azurin YP_001209936.1 1085038 R 246195 CDS YP_001209937.1 146328822 5122127 complement(1085590..1086153) 1 NC_009446.1 hypothetical protein 1086153 5122127 DNO_1050 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209937.1 1085590 R 246195 CDS YP_001209938.1 146329599 5123417 complement(1086150..1087928) 1 NC_009446.1 identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginyl-tRNA synthetase 1087928 argS 5123417 argS Dichelobacter nodosus VCS1703A arginyl-tRNA synthetase YP_001209938.1 1086150 R 246195 CDS YP_001209939.1 146329044 5123022 1088111..1089118 1 NC_009446.1 identified by match to protein family HMM PF01207; tRNA-dihydrouridine synthase A 1089118 dusA 5123022 dusA Dichelobacter nodosus VCS1703A tRNA-dihydrouridine synthase A YP_001209939.1 1088111 D 246195 CDS YP_001209940.1 146329218 5122188 1089115..1090230 1 NC_009446.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1090230 asd 5122188 asd Dichelobacter nodosus VCS1703A aspartate-semialdehyde dehydrogenase YP_001209940.1 1089115 D 246195 CDS YP_001209941.1 146329051 5122963 complement(1090391..1092283) 1 NC_009446.1 helicase family protein 1092283 5122963 DNO_1054 Dichelobacter nodosus VCS1703A helicase family protein YP_001209941.1 1090391 R 246195 CDS YP_001209942.1 146328816 5123164 1092464..1093504 1 NC_009446.1 identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanyl-tRNA synthetase subunit alpha 1093504 pheS 5123164 pheS Dichelobacter nodosus VCS1703A phenylalanyl-tRNA synthetase subunit alpha YP_001209942.1 1092464 D 246195 CDS YP_001209943.1 146329265 5123426 1093517..1095886 1 NC_009446.1 identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase subunit beta 1095886 pheT 5123426 pheT Dichelobacter nodosus VCS1703A phenylalanyl-tRNA synthetase subunit beta YP_001209943.1 1093517 D 246195 CDS YP_001209944.1 146328691 5122355 1095893..1096189 1 NC_009446.1 identified by match to protein family HMM PF00216; match to protein family HMM TIGR00987; integration host factor subunit alpha 1096189 ihfA 5122355 ihfA Dichelobacter nodosus VCS1703A integration host factor subunit alpha YP_001209944.1 1095893 D 246195 CDS YP_001209945.1 146329816 5123198 complement(1096655..1097395) 1 NC_009446.1 identified by match to protein family HMM PF01553; acyltransferase domain-containing protein 1097395 5123198 DNO_1058 Dichelobacter nodosus VCS1703A acyltransferase domain-containing protein YP_001209945.1 1096655 R 246195 CDS YP_001209946.1 146329046 5122819 complement(1097392..1097937) 1 NC_009446.1 identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; HAD superfamily hydrolase 1097937 5122819 DNO_1059 Dichelobacter nodosus VCS1703A HAD superfamily hydrolase YP_001209946.1 1097392 R 246195 CDS YP_001209947.1 146329169 5123061 1098017..1099450 1 NC_009446.1 identified by match to protein family HMM PF00583; hypothetical protein 1099450 5123061 DNO_1061 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209947.1 1098017 D 246195 CDS YP_001209948.1 146329773 5122328 complement(1099447..1100520) 1 NC_009446.1 identified by match to protein family HMM PF01743; tRNA nucleotidyltransferase 1100520 cca 5122328 cca Dichelobacter nodosus VCS1703A tRNA nucleotidyltransferase YP_001209948.1 1099447 R 246195 CDS YP_001209949.1 146329211 5123330 1100557..1101465 1 NC_009446.1 identified by match to protein family HMM PF01513; ATP-NAD kinase 1101465 5123330 DNO_1062 Dichelobacter nodosus VCS1703A ATP-NAD kinase YP_001209949.1 1100557 D 246195 CDS YP_001209950.1 146328663 5123261 1101478..1103136 1 NC_009446.1 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 1103136 recN 5123261 recN Dichelobacter nodosus VCS1703A DNA repair protein RecN YP_001209950.1 1101478 D 246195 CDS YP_001209951.1 146329585 5122471 1103183..1103515 1 NC_009446.1 SmpA/OmlA family lipoprotein 1103515 5122471 DNO_1064 Dichelobacter nodosus VCS1703A SmpA/OmlA family lipoprotein YP_001209951.1 1103183 D 246195 CDS YP_001209952.1 146328644 5123023 1103529..1104809 1 NC_009446.1 identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; seryl-tRNA synthetase 1104809 serS 5123023 serS Dichelobacter nodosus VCS1703A seryl-tRNA synthetase YP_001209952.1 1103529 D 246195 CDS YP_001209953.1 146329052 5122898 1104849..1105544 1 NC_009446.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate uptake regulator PhoU 1105544 phoU 5122898 phoU Dichelobacter nodosus VCS1703A phosphate uptake regulator PhoU YP_001209953.1 1104849 D 246195 CDS YP_001209954.1 146328899 5123105 1105557..1106171 1 NC_009446.1 identified by match to protein family HMM PF00877; hypothetical protein 1106171 5123105 DNO_1067 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209954.1 1105557 D 246195 CDS YP_001209955.1 146329414 5122802 1106171..1108162 1 NC_009446.1 hypothetical protein 1108162 5122802 DNO_1068 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209955.1 1106171 D 246195 CDS YP_001209956.1 146329775 5123302 complement(1108215..1111046) 1 NC_009446.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1111046 gcvP 5123302 gcvP Dichelobacter nodosus VCS1703A glycine dehydrogenase YP_001209956.1 1108215 R 246195 CDS YP_001209957.1 146329273 5123312 complement(1111049..1111417) 1 NC_009446.1 identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527; glycine cleavage system protein H 1111417 gcvH 5123312 gcvH Dichelobacter nodosus VCS1703A glycine cleavage system protein H YP_001209957.1 1111049 R 246195 CDS YP_001209958.1 146329802 5123250 1111567..1112103 1 NC_009446.1 identified by match to protein family HMM PF00406; match to protein family HMM TIGR01351; adenylate kinase 1112103 adk 5123250 adk Dichelobacter nodosus VCS1703A adenylate kinase YP_001209958.1 1111567 D 246195 CDS YP_001209959.1 146329278 5122447 1112114..1113181 1 NC_009446.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1113181 aroC 5122447 aroC Dichelobacter nodosus VCS1703A chorismate synthase YP_001209959.1 1112114 D 246195 CDS YP_001209960.1 146328911 5123229 complement(1113255..1114196) 1 NC_009446.1 this enzyme from Pyrococcus has carbamoyl phosphate synthetase activity even though the enzyme shows sequence and structural similarity to carbamate kinase; this enzyme using carbate and ATP to synthesize carbamoyl phosphate which may be a favorable reaction at the extreme temperatures these organisms live under; carbamate kinase-like carbamoyl phosphate synthetase 1114196 arcC 5123229 arcC Dichelobacter nodosus VCS1703A carbamate kinase-like carbamoyl phosphate synthetase YP_001209960.1 1113255 R 246195 CDS YP_001209961.1 146329190 5122761 complement(1114270..1115277) 1 NC_009446.1 identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658; ornithine carbamoyltransferase 1115277 argF-1 5122761 argF-1 Dichelobacter nodosus VCS1703A ornithine carbamoyltransferase YP_001209961.1 1114270 R 246195 CDS YP_001209962.1 146329435 5122217 complement(1115345..1116592) 1 NC_009446.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 1116592 arcA 5122217 arcA Dichelobacter nodosus VCS1703A arginine deiminase YP_001209962.1 1115345 R 246195 CDS YP_001209963.1 146328883 5122839 complement(1116804..1117160) 1 NC_009446.1 identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase 1117160 folB 5122839 folB Dichelobacter nodosus VCS1703A dihydroneopterin aldolase YP_001209963.1 1116804 R 246195 CDS YP_001209964.1 146329017 5122178 1117266..1117874 1 NC_009446.1 identified by match to protein family HMM PF02660; match to protein family HMM TIGR00023; hypothetical protein 1117874 5122178 DNO_1077 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209964.1 1117266 D 246195 CDS YP_001209965.1 146329704 5122738 complement(1117910..1119781) 1 NC_009446.1 identified by match to protein family HMM PF00140; match to protein family HMM PF03979; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF04546; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor 1119781 rpoD 5122738 rpoD Dichelobacter nodosus VCS1703A RNA polymerase sigma-70 factor YP_001209965.1 1117910 R 246195 CDS YP_001209966.1 146329001 5122227 complement(1119882..1121537) 1 NC_009446.1 identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase 1121537 dnaG 5122227 dnaG Dichelobacter nodosus VCS1703A DNA primase YP_001209966.1 1119882 R 246195 CDS YP_001209967.1 146329785 5122759 complement(1121549..1122001) 1 NC_009446.1 identified by match to protein family HMM PF02637; GatB-Yqey domain-containing protein 1122001 5122759 DNO_1080 Dichelobacter nodosus VCS1703A GatB-Yqey domain-containing protein YP_001209967.1 1121549 R 246195 CDS YP_001209968.1 146329207 5122445 complement(1122004..1122219) 1 NC_009446.1 identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; 30S ribosomal protein S21 1122219 rpsU 5122445 rpsU Dichelobacter nodosus VCS1703A 30S ribosomal protein S21 YP_001209968.1 1122004 R 246195 CDS YP_001209969.1 146329777 5123111 complement(1122397..1122960) 1 NC_009446.1 identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein 1122960 5123111 DNO_1082 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209969.1 1122397 R 246195 CDS YP_001209970.1 146328742 5123315 complement(1123005..1124279) 1 NC_009446.1 identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA methyltransferase 1124279 5123315 DNO_1083 Dichelobacter nodosus VCS1703A 23S rRNA methyltransferase YP_001209970.1 1123005 R 246195 CDS YP_001209971.1 146329255 5123173 complement(1124644..1125753) 1 NC_009446.1 identified by match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 1125753 aroB 5123173 aroB Dichelobacter nodosus VCS1703A 3-dehydroquinate synthase YP_001209971.1 1124644 R 246195 CDS YP_001209972.1 146329661 5122816 complement(1125755..1126399) 1 NC_009446.1 identified by match to protein family HMM PF00484; carbonic anhydrase 1126399 5122816 DNO_1085 Dichelobacter nodosus VCS1703A carbonic anhydrase YP_001209972.1 1125755 R 246195 CDS YP_001209973.1 146328673 5122522 complement(1126402..1127652) 1 NC_009446.1 identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283; lytic murein transglycosylase family protein 1127652 5122522 DNO_1086 Dichelobacter nodosus VCS1703A lytic murein transglycosylase family protein YP_001209973.1 1126402 R 246195 CDS YP_001209974.1 146329374 5122962 complement(1128034..1128837) 1 NC_009446.1 identified by match to protein family HMM PF01171; match to protein family HMM PF06508; adenine nucleotide alpha hydrolase ATP-binding family protein 1128837 5122962 DNO_1088 Dichelobacter nodosus VCS1703A adenine nucleotide alpha hydrolase ATP-binding family protein YP_001209974.1 1128034 R 246195 CDS YP_001209975.1 146329138 5123180 complement(1129304..1130263) 1 NC_009446.1 identified by match to protein family HMM PF03255; match to protein family HMM TIGR00513; acetyl-CoA carboxylase, alpha subunit 1130263 accA 5123180 accA Dichelobacter nodosus VCS1703A acetyl-CoA carboxylase, alpha subunit YP_001209975.1 1129304 R 246195 CDS YP_001209976.1 146329864 5122339 complement(1130266..1130709) 1 NC_009446.1 hypothetical protein 1130709 5122339 DNO_1092 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209976.1 1130266 R 246195 CDS YP_001209977.1 146329398 5123065 complement(1130702..1138366) 1 NC_009446.1 identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; chemotaxis protein ChpA 1138366 chpA 5123065 chpA Dichelobacter nodosus VCS1703A chemotaxis protein ChpA YP_001209977.1 1130702 R 246195 CDS YP_001209978.1 146328675 5122393 complement(1138426..1139736) 1 NC_009446.1 identified by match to protein family HMM PF00015; twitching motility protein PilJ 1139736 pilJ 5122393 pilJ Dichelobacter nodosus VCS1703A twitching motility protein PilJ YP_001209978.1 1138426 R 246195 CDS YP_001209979.1 146329766 5122834 complement(1139751..1140272) 1 NC_009446.1 hypothetical protein 1140272 5122834 DNO_1095 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209979.1 1139751 R 246195 CDS YP_001209980.1 146329215 5123337 complement(1140269..1140631) 1 NC_009446.1 identified by match to protein family HMM PF00072; twitching motility regulator PilH 1140631 pilH 5123337 pilH Dichelobacter nodosus VCS1703A twitching motility regulator PilH YP_001209980.1 1140269 R 246195 CDS YP_001209981.1 146329623 5123254 complement(1140668..1141051) 1 NC_009446.1 identified by match to protein family HMM PF00072; twitching motility regulator PilG 1141051 pilG 5123254 pilG Dichelobacter nodosus VCS1703A twitching motility regulator PilG YP_001209981.1 1140668 R 246195 CDS YP_001209982.1 146329693 5123379 complement(1141153..1141542) 1 NC_009446.1 identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; hypothetical protein 1141542 5123379 DNO_1098 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209982.1 1141153 R 246195 CDS YP_001209983.1 146328960 5123217 1141636..1142583 1 NC_009446.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin reductase 1142583 trxB 5123217 trxB Dichelobacter nodosus VCS1703A thioredoxin reductase YP_001209983.1 1141636 D 246195 CDS YP_001209984.1 146329877 5123398 1142610..1144358 1 NC_009446.1 identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoamide dehydrogenase 1144358 lpdA 5123398 lpdA Dichelobacter nodosus VCS1703A dihydrolipoamide dehydrogenase YP_001209984.1 1142610 D 246195 CDS YP_001209985.1 146329401 5123262 1144443..1145276 1 NC_009446.1 identified by match to protein family HMM PF02666; match to protein family HMM TIGR00163; phosphatidylserine decarboxylase 1145276 psd 5123262 psd Dichelobacter nodosus VCS1703A phosphatidylserine decarboxylase YP_001209985.1 1144443 D 246195 CDS YP_001209986.1 146329571 5123076 1145257..1145709 1 NC_009446.1 identified by match to protein family HMM PF00075; RNase H 1145709 rnhA 5123076 rnhA Dichelobacter nodosus VCS1703A RNase H YP_001209986.1 1145257 D 246195 CDS YP_001209987.1 146329742 5122905 complement(1145728..1147071) 1 NC_009446.1 identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 1147071 brnQ 5122905 brnQ Dichelobacter nodosus VCS1703A branched-chain amino acid transport system II carrier protein YP_001209987.1 1145728 R 246195 CDS YP_001209988.1 146329049 5123361 complement(1147235..1148053) 1 NC_009446.1 hypothetical protein 1148053 5123361 DNO_1104 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209988.1 1147235 R 246195 CDS YP_001209989.1 146329535 5122910 1148225..1148446 1 NC_009446.1 identified by match to protein family HMM PF04325; hypothetical protein 1148446 5122910 DNO_1105 Dichelobacter nodosus VCS1703A hypothetical protein YP_001209989.1 1148225 D 246195 CDS YP_001209990.1 146329004 5122629 1148544..1150712 1 NC_009446.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1150712 ppk 5122629 ppk Dichelobacter nodosus VCS1703A polyphosphate kinase YP_001209990.1 1148544 D 246195 CDS YP_001209991.1 146329749 5122797 1150732..1151550 1 NC_009446.1 identified by match to protein family HMM PF01145; SPFH domain-containing protein 1151550 5122797 DNO_1107 Dichelobacter nodosus VCS1703A SPFH domain-containing protein YP_001209991.1 1150732 D 246195 CDS YP_001209992.1 146329135 5123354 1151650..1153299 1 NC_009446.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1153299 glnS 5123354 glnS Dichelobacter nodosus VCS1703A glutaminyl-tRNA synthetase YP_001209992.1 1151650 D 246195 CDS YP_001209993.1 146329847 5123280 1153350..1153790 1 NC_009446.1 identified by match to protein family HMM PF02566; OsmC-like family protein 1153790 5123280 DNO_1109 Dichelobacter nodosus VCS1703A OsmC-like family protein YP_001209993.1 1153350 D 246195 CDS YP_001209994.1 146329018 5122177 1153906..1157613 1 NC_009446.1 identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857; phosphoribosylformylglycinamidine synthase 1157613 5122177 DNO_1110 Dichelobacter nodosus VCS1703A phosphoribosylformylglycinamidine synthase YP_001209994.1 1153906 D 246195 CDS YP_001209995.1 146328791 5122754 1157719..1158696 1 NC_009446.1 identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367; K+-dependent Na+-Ca+ exchanger related family protein 1158696 5122754 DNO_1111 Dichelobacter nodosus VCS1703A K+-dependent Na+-Ca+ exchanger related family protein YP_001209995.1 1157719 D 246195 CDS YP_001209996.1 146329516 5123456 1158701..1159420 1 NC_009446.1 identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; phosphoribosylaminoimidazole-succinocarboxamide synthase 1159420 purC 5123456 purC Dichelobacter nodosus VCS1703A phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001209996.1 1158701 D 246195 CDS YP_001209997.1 146329363 5122533 1159420..1160415 1 NC_009446.1 identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878; phosphoribosylformylglycinamidine cyclo-ligase 1160415 purM 5122533 purM Dichelobacter nodosus VCS1703A phosphoribosylformylglycinamidine cyclo-ligase YP_001209997.1 1159420 D 246195 CDS YP_001209998.1 146328745 5122534 1160507..1161400 1 NC_009446.1 identified by match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase 1161400 dapA 5122534 dapA Dichelobacter nodosus VCS1703A dihydrodipicolinate synthase YP_001209998.1 1160507 D 246195 CDS YP_001209999.1 146329784 5122680 1161418..1162485 1 NC_009446.1 lipoprotein 1162485 5122680 DNO_1115 Dichelobacter nodosus VCS1703A lipoprotein YP_001209999.1 1161418 D 246195 CDS YP_001210000.1 146329481 5122443 1162492..1164264 1 NC_009446.1 identified by match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM PF08676; match to protein family HMM TIGR00585; DNA mismatch repair protein MutL 1164264 mutL 5122443 mutL Dichelobacter nodosus VCS1703A DNA mismatch repair protein MutL YP_001210000.1 1162492 D 246195 CDS YP_001210001.1 146328871 5122642 1164264..1165220 1 NC_009446.1 identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA delta(2)-isopentenylpyrophosphate transferase 1165220 miaA 5122642 miaA Dichelobacter nodosus VCS1703A tRNA delta(2)-isopentenylpyrophosphate transferase YP_001210001.1 1164264 D 246195 CDS YP_001210002.1 146329788 5123020 1165572..1167359 1 NC_009446.1 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459; aspartyl-tRNA synthetase 1167359 aspS 5123020 aspS Dichelobacter nodosus VCS1703A aspartyl-tRNA synthetase YP_001210002.1 1165572 D 246195 CDS YP_001210003.1 146329442 5122449 complement(1167429..1167878) 1 NC_009446.1 identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; 50S ribosomal protein L9 1167878 rplI 5122449 rplI Dichelobacter nodosus VCS1703A 50S ribosomal protein L9 YP_001210003.1 1167429 R 246195 CDS YP_001210004.1 146328891 5123247 complement(1167891..1168106) 1 NC_009446.1 identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 1168106 rpsR 5123247 rpsR Dichelobacter nodosus VCS1703A 30S ribosomal protein S18 YP_001210004.1 1167891 R 246195 CDS YP_001210005.1 146329026 5123068 complement(1168117..1168443) 1 NC_009446.1 identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 1168443 rpsF 5123068 rpsF Dichelobacter nodosus VCS1703A 30S ribosomal protein S6 YP_001210005.1 1168117 R 246195 CDS YP_001210006.1 146329754 5122686 1168654..1169721 1 NC_009446.1 identified by match to protein family HMM PF01612; ribonuclease D 1169721 rnd 5122686 rnd Dichelobacter nodosus VCS1703A ribonuclease D YP_001210006.1 1168654 D 246195 CDS YP_001210007.1 146328767 5123349 complement(1169708..1170301) 1 NC_009446.1 identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase 1170301 coaE 5123349 coaE Dichelobacter nodosus VCS1703A dephospho-CoA kinase YP_001210007.1 1169708 R 246195 CDS YP_001210008.1 146329054 5122674 complement(1170298..1171158) 1 NC_009446.1 identified by match to protein family HMM PF01478; match to protein family HMM PF06750; type IV prepilin peptidase 1171158 fimP 5122674 fimP Dichelobacter nodosus VCS1703A type IV prepilin peptidase YP_001210008.1 1170298 R 246195 CDS YP_001210009.1 146329906 5122925 complement(1171158..1172381) 1 NC_009446.1 identified by match to protein family HMM PF00482; type IV fimbrial biogenesis protein FimO 1172381 fimO 5122925 fimO Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis protein FimO YP_001210009.1 1171158 R 246195 CDS YP_001210010.1 146329121 5122239 complement(1172401..1174095) 1 NC_009446.1 identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02538; type IV fimbrial biogenesis nucleotide binding protein FimN 1174095 fimN 5122239 fimN Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis nucleotide binding protein FimN YP_001210010.1 1172401 R 246195 CDS YP_001210011.1 146329844 5122620 complement(1174092..1174808) 1 NC_009446.1 identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; para-aminobenzoate synthetase, component II 1174808 5122620 DNO_1127 Dichelobacter nodosus VCS1703A para-aminobenzoate synthetase, component II YP_001210011.1 1174092 R 246195 CDS YP_001210012.1 146328642 5122180 1174756..1175445 1 NC_009446.1 hypothetical protein 1175445 recO 5122180 recO Dichelobacter nodosus VCS1703A hypothetical protein YP_001210012.1 1174756 D 246195 CDS YP_001210013.1 146329372 5122274 1175668..1176099 1 NC_009446.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1176099 rplM 5122274 rplM Dichelobacter nodosus VCS1703A 50S ribosomal protein L13 YP_001210013.1 1175668 D 246195 CDS YP_001210014.1 146328809 5122376 1176109..1176498 1 NC_009446.1 identified by match to protein family HMM PF00380; 30S ribosomal protein S9 1176498 rpsI 5122376 rpsI Dichelobacter nodosus VCS1703A 30S ribosomal protein S9 YP_001210014.1 1176109 D 246195 CDS YP_001210015.1 146329514 5123434 complement(1176567..1177460) 1 NC_009446.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225; tyrosine recombinase XerD 1177460 xerD 5123434 xerD Dichelobacter nodosus VCS1703A tyrosine recombinase XerD YP_001210015.1 1176567 R 246195 CDS YP_001210016.1 146329622 5122499 1177536..1178867 1 NC_009446.1 hypothetical protein 1178867 5122499 DNO_1132 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210016.1 1177536 D 246195 CDS YP_001210017.1 146329603 5123383 1178864..1179313 1 NC_009446.1 hypothetical protein 1179313 5123383 DNO_1133 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210017.1 1178864 D 246195 CDS YP_001210018.1 146328737 5122877 1179306..1180124 1 NC_009446.1 identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; match to protein family HMM TIGR00577; formamidopyrimidine-DNA glycosylase 1180124 mutM 5122877 mutM Dichelobacter nodosus VCS1703A formamidopyrimidine-DNA glycosylase YP_001210018.1 1179306 D 246195 CDS YP_001210019.1 146329409 5122378 complement(1180081..1181100) 1 NC_009446.1 identified by match to protein family HMM PF01142; TruD family pseudouridine synthase 1181100 5122378 DNO_1134 Dichelobacter nodosus VCS1703A TruD family pseudouridine synthase YP_001210019.1 1180081 R 246195 CDS YP_001210020.1 146328638 5122891 complement(1181108..1183228) 1 NC_009446.1 identified by match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase 1183228 5122891 DNO_1136 Dichelobacter nodosus VCS1703A 3-hydroxyacyl-CoA dehydrogenase YP_001210020.1 1181108 R 246195 CDS YP_001210021.1 146329716 5122191 complement(1183286..1185004) 1 NC_009446.1 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF04073; match to protein family HMM TIGR00409; prolyl-tRNA synthetase 1185004 proS 5122191 proS Dichelobacter nodosus VCS1703A prolyl-tRNA synthetase YP_001210021.1 1183286 R 246195 CDS YP_001210022.1 146329575 5122881 complement(1185174..1185674) 1 NC_009446.1 hypothetical protein 1185674 5122881 DNO_1138 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210022.1 1185174 R 246195 CDS YP_001210023.1 146329016 5123086 complement(1185811..1186383) 1 NC_009446.1 hypothetical protein 1186383 5123086 DNO_1139 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210023.1 1185811 R 246195 CDS YP_001210024.1 146329408 5122737 complement(1186433..1187833) 1 NC_009446.1 identified by match to protein family HMM PF00132; match to protein family HMM PF00483; match to protein family HMM TIGR01173; UDP-N-acetylglucosamine pyrophosphorylase 1187833 glmU 5122737 glmU Dichelobacter nodosus VCS1703A UDP-N-acetylglucosamine pyrophosphorylase YP_001210024.1 1186433 R 246195 CDS YP_001210025.1 146329853 5122369 complement(1187959..1188390) 1 NC_009446.1 identified by match to protein family HMM PF02823; match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon 1188390 atpC 5122369 atpC Dichelobacter nodosus VCS1703A ATP synthase F1 subunit epsilon YP_001210025.1 1187959 R 246195 CDS YP_001210026.1 146329438 5122172 complement(1188402..1189793) 1 NC_009446.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1189793 atpD 5122172 atpD Dichelobacter nodosus VCS1703A F0F1 ATP synthase subunit beta YP_001210026.1 1188402 R 246195 CDS YP_001210027.1 146328692 5122876 complement(1189816..1190685) 1 NC_009446.1 identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma 1190685 atpG 5122876 atpG Dichelobacter nodosus VCS1703A ATP synthase F1 subunit gamma YP_001210027.1 1189816 R 246195 CDS YP_001210028.1 146329630 5122322 complement(1190695..1192236) 1 NC_009446.1 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha 1192236 atpA 5122322 atpA Dichelobacter nodosus VCS1703A ATP synthase F1 subunit alpha YP_001210028.1 1190695 R 246195 CDS YP_001210029.1 146328896 5123201 complement(1192238..1192792) 1 NC_009446.1 identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145; ATP synthase F1 subunit delta 1192792 atpH 5123201 atpH Dichelobacter nodosus VCS1703A ATP synthase F1 subunit delta YP_001210029.1 1192238 R 246195 CDS YP_001210030.1 146329772 5122850 complement(1192794..1193264) 1 NC_009446.1 identified by match to protein family HMM PF00430; match to protein family HMM TIGR01144; ATP synthase F0 subunit B 1193264 atpF 5122850 atpF Dichelobacter nodosus VCS1703A ATP synthase F0 subunit B YP_001210030.1 1192794 R 246195 CDS YP_001210031.1 146329496 5123331 complement(1193301..1193588) 1 NC_009446.1 identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260; ATP synthase F0 subunit C 1193588 atpE 5123331 atpE Dichelobacter nodosus VCS1703A ATP synthase F0 subunit C YP_001210031.1 1193301 R 246195 CDS YP_001210032.1 146328689 5122789 complement(1193624..1194415) 1 NC_009446.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1194415 atpB 5122789 atpB Dichelobacter nodosus VCS1703A F0F1 ATP synthase subunit A YP_001210032.1 1193624 R 246195 CDS YP_001210033.1 146329286 5123266 complement(1194816..1195685) 1 NC_009446.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB family partitioning protein 1195685 5123266 DNO_1149 Dichelobacter nodosus VCS1703A ParB family partitioning protein YP_001210033.1 1194816 R 246195 CDS YP_001210034.1 146328718 5122359 complement(1195720..1196355) 1 NC_009446.1 identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; glucose inhibited division protein GidB 1196355 gidB 5122359 gidB Dichelobacter nodosus VCS1703A glucose inhibited division protein GidB YP_001210034.1 1195720 R 246195 CDS YP_001210035.1 146329787 5122168 complement(1196348..1197829) 1 NC_009446.1 identified by match to protein family HMM PF00883; leucine aminopeptidase 1197829 5122168 DNO_1151 Dichelobacter nodosus VCS1703A leucine aminopeptidase YP_001210035.1 1196348 R 246195 CDS YP_001210036.1 146329237 5122448 1197957..1199006 1 NC_009446.1 identified by match to protein family HMM PF03739; hypothetical protein 1199006 5122448 DNO_1152 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210036.1 1197957 D 246195 CDS YP_001210037.1 146328919 5122934 1199003..1200052 1 NC_009446.1 identified by match to protein family HMM PF03739; hypothetical protein 1200052 5122934 DNO_1153 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210037.1 1199003 D 246195 CDS YP_001210038.1 146329203 5122741 complement(1200123..1200362) 1 NC_009446.1 hypothetical protein 1200362 5122741 DNO_1154 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210038.1 1200123 R 246195 CDS YP_001210039.1 146329288 5123274 complement(1200411..1201931) 1 NC_009446.1 lipoprotein 1201931 5123274 DNO_1155 Dichelobacter nodosus VCS1703A lipoprotein YP_001210039.1 1200411 R 246195 CDS YP_001210040.1 146329000 5122361 complement(1202011..1202127) 1 NC_009446.1 hypothetical protein 1202127 5122361 DNO_1156 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210040.1 1202011 R 246195 CDS YP_001210041.1 146329712 5122742 1202175..1203980 1 NC_009446.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 1203980 5122742 DNO_1157 Dichelobacter nodosus VCS1703A potassium/proton antiporter YP_001210041.1 1202175 D 246195 CDS YP_001210042.1 146329495 5122315 1204040..1204384 1 NC_009446.1 identified by match to protein family HMM PF04342; hypothetical protein 1204384 5122315 DNO_1158 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210042.1 1204040 D 246195 CDS YP_001210043.1 146329666 5123155 1204402..1206606 1 NC_009446.1 identified by match to protein family HMM PF00575; transcriptional accessory protein 1206606 5123155 DNO_1159 Dichelobacter nodosus VCS1703A transcriptional accessory protein YP_001210043.1 1204402 D 246195 CDS YP_001210044.1 146328707 5123298 1206603..1207430 1 NC_009446.1 identified by match to protein family HMM PF02086; match to protein family HMM TIGR00571; DNA adenine methylase 1207430 dam 5123298 dam Dichelobacter nodosus VCS1703A DNA adenine methylase YP_001210044.1 1206603 D 246195 CDS YP_001210045.1 146328725 5123375 complement(1207427..1208068) 1 NC_009446.1 hypothetical protein 1208068 5123375 DNO_1160 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210045.1 1207427 R 246195 CDS YP_001210046.1 146329244 5123096 1208219..1208782 1 NC_009446.1 identified by match to protein family HMM PF02632; BioY family protein 1208782 5123096 DNO_1162 Dichelobacter nodosus VCS1703A BioY family protein YP_001210046.1 1208219 D 246195 CDS YP_001210047.1 146329832 5123172 complement(1208820..1209905) 1 NC_009446.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 1209905 trmA 5123172 trmA Dichelobacter nodosus VCS1703A tRNA (uracil-5-)-methyltransferase YP_001210047.1 1208820 R 246195 CDS YP_001210048.1 146329881 5122375 complement(1209909..1210775) 1 NC_009446.1 hypothetical protein 1210775 5122375 DNO_1164 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210048.1 1209909 R 246195 CDS YP_001210049.1 146329606 5122992 1210835..1214431 1 NC_009446.1 identified by match to protein family HMM PF00580; exonuclease V, beta subunit 1214431 recB 5122992 recB Dichelobacter nodosus VCS1703A exonuclease V, beta subunit YP_001210049.1 1210835 D 246195 CDS YP_001210050.1 146329612 5122970 complement(1214476..1214832) 1 NC_009446.1 hypothetical protein 1214832 5122970 DNO_1166 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210050.1 1214476 R 246195 CDS YP_001210051.1 146329405 5122268 complement(1215097..1216902) 1 NC_009446.1 identified by match to protein family HMM PF00082; match to protein family HMM PF01483; acidic extracellular subtilisin-like protease AprV2 1216902 aprV2 5122268 aprV2 Dichelobacter nodosus VCS1703A acidic extracellular subtilisin-like protease AprV2 YP_001210051.1 1215097 R 246195 CDS YP_001210052.1 146328659 5122421 complement(1217131..1217226) 1 NC_009446.1 hypothetical protein 1217226 5122421 DNO_1168 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210052.1 1217131 R 246195 CDS YP_001210053.1 146328879 5122491 complement(1217334..1217441) 1 NC_009446.1 hypothetical protein 1217441 5122491 DNO_1169 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210053.1 1217334 R 246195 CDS YP_001210054.1 146329307 5122427 complement(1217442..1217999) 1 NC_009446.1 identified by match to protein family HMM PF07719; lipoprotein 1217999 5122427 DNO_1170 Dichelobacter nodosus VCS1703A lipoprotein YP_001210054.1 1217442 R 246195 CDS YP_001210055.1 146329268 5122387 complement(1218024..1218608) 1 NC_009446.1 identified by match to protein family HMM PF00691; match to protein family HMM TIGR02802; OmpA domain-containing protein 1218608 pal 5122387 pal Dichelobacter nodosus VCS1703A OmpA domain-containing protein YP_001210055.1 1218024 R 246195 CDS YP_001210056.1 146329411 5123259 complement(1218632..1219906) 1 NC_009446.1 identified by match to protein family HMM PF04052; match to protein family HMM PF07676; match to protein family HMM TIGR02800; TolB protein 1219906 tolB 5123259 tolB Dichelobacter nodosus VCS1703A TolB protein YP_001210056.1 1218632 R 246195 CDS YP_001210057.1 146328803 5122297 complement(1220043..1221221) 1 NC_009446.1 TolA protein 1221221 tolA 5122297 tolA Dichelobacter nodosus VCS1703A TolA protein YP_001210057.1 1220043 R 246195 CDS YP_001210058.1 146329893 5123441 complement(1221214..1221675) 1 NC_009446.1 identified by match to protein family HMM PF02472; TolR protein 1221675 tolR 5123441 tolR Dichelobacter nodosus VCS1703A TolR protein YP_001210058.1 1221214 R 246195 CDS YP_001210059.1 146329605 5122165 complement(1221688..1222371) 1 NC_009446.1 identified by match to protein family HMM PF01618; TolQ protein 1222371 tolQ 5122165 tolQ Dichelobacter nodosus VCS1703A TolQ protein YP_001210059.1 1221688 R 246195 CDS YP_001210060.1 146329062 5122137 complement(1222406..1223422) 1 NC_009446.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1223422 ruvB 5122137 ruvB Dichelobacter nodosus VCS1703A Holliday junction DNA helicase RuvB YP_001210060.1 1222406 R 246195 CDS YP_001210061.1 146328995 5122884 complement(1223419..1224033) 1 NC_009446.1 identified by match to protein family HMM PF01330; match to protein family HMM TIGR00084; Holliday junction ATP-dependent DNA helicase RuvA 1224033 ruvA 5122884 ruvA Dichelobacter nodosus VCS1703A Holliday junction ATP-dependent DNA helicase RuvA YP_001210061.1 1223419 R 246195 CDS YP_001210062.1 146328711 5122781 complement(1224030..1224560) 1 NC_009446.1 identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC 1224560 ruvC 5122781 ruvC Dichelobacter nodosus VCS1703A crossover junction endodeoxyribonuclease RuvC YP_001210062.1 1224030 R 246195 CDS YP_001210063.1 146329317 5122184 complement(1224562..1225296) 1 NC_009446.1 identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 1225296 5122184 DNO_1179 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210063.1 1224562 R 246195 CDS YP_001210064.1 146329860 5122333 1225571..1226578 1 NC_009446.1 phosphate binding family protein 1226578 pstS 5122333 pstS Dichelobacter nodosus VCS1703A phosphate binding family protein YP_001210064.1 1225571 D 246195 CDS YP_001210065.1 146329734 5122968 1226698..1228071 1 NC_009446.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; ABC-type phosphate-dependent transport system family protein 1228071 5122968 DNO_1181 Dichelobacter nodosus VCS1703A ABC-type phosphate-dependent transport system family protein YP_001210065.1 1226698 D 246195 CDS YP_001210066.1 146329206 5123369 1228080..1229396 1 NC_009446.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; ABC-type phosphate-dependent transport system family protein 1229396 5123369 DNO_1182 Dichelobacter nodosus VCS1703A ABC-type phosphate-dependent transport system family protein YP_001210066.1 1228080 D 246195 CDS YP_001210067.1 146329593 5122886 1229402..1230271 1 NC_009446.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; ABC-type phosphate transporter ATP-binding protein 1230271 pstB 5122886 pstB Dichelobacter nodosus VCS1703A ABC-type phosphate transporter ATP-binding protein YP_001210067.1 1229402 D 246195 CDS YP_001210068.1 146328850 5122371 1230475..1230957 1 NC_009446.1 identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 1230957 greA 5122371 greA Dichelobacter nodosus VCS1703A transcription elongation factor GreA YP_001210068.1 1230475 D 246195 CDS YP_001210069.1 146328688 5122590 1231150..1231329 1 NC_009446.1 hypothetical protein 1231329 5122590 DNO_1185 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210069.1 1231150 D 246195 CDS YP_001210070.1 146329589 5122965 1231313..1232863 1 NC_009446.1 identified by match to protein family HMM PF07690; tripeptide permease family protein 1232863 5122965 DNO_1186 Dichelobacter nodosus VCS1703A tripeptide permease family protein YP_001210070.1 1231313 D 246195 CDS YP_001210071.1 146329234 5122411 complement(1232907..1234667) 1 NC_009446.1 identified by match to protein family HMM PF02080; match to protein family HMM PF03600; hypothetical protein 1234667 5122411 DNO_1187 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210071.1 1232907 R 246195 CDS YP_001210072.1 146328862 5122844 complement(1234781..1236034) 1 NC_009446.1 hypothetical protein 1236034 5122844 DNO_1188 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210072.1 1234781 R 246195 CDS YP_001210073.1 146329572 5122577 complement(1236027..1236626) 1 NC_009446.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1236626 5122577 DNO_1189 Dichelobacter nodosus VCS1703A TetR family transcriptional regulator YP_001210073.1 1236027 R 246195 CDS YP_001210074.1 146329393 5122451 1236759..1238072 1 NC_009446.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; HlyD family secretion protein 1238072 5122451 DNO_1190 Dichelobacter nodosus VCS1703A HlyD family secretion protein YP_001210074.1 1236759 D 246195 CDS YP_001210075.1 146329707 5122908 1238098..1241238 1 NC_009446.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; mutidrug efflux protein 1241238 acrF 5122908 acrF Dichelobacter nodosus VCS1703A mutidrug efflux protein YP_001210075.1 1238098 D 246195 CDS YP_001210076.1 146328985 5123043 1241243..1242646 1 NC_009446.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; outer membrane multidrug efflux protein 1242646 5123043 DNO_1192 Dichelobacter nodosus VCS1703A outer membrane multidrug efflux protein YP_001210076.1 1241243 D 246195 CDS YP_001210077.1 146329014 5123219 complement(1243028..1243909) 1 NC_009446.1 hypothetical protein 1243909 5123219 DNO_1194 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210077.1 1243028 R 246195 CDS YP_001210078.1 146329720 5122734 complement(1243906..1244307) 1 NC_009446.1 hypothetical protein 1244307 5122734 DNO_1195 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210078.1 1243906 R 246195 CDS YP_001210079.1 146329870 5123157 complement(1244308..1245456) 1 NC_009446.1 identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfurase 1245456 iscS 5123157 iscS Dichelobacter nodosus VCS1703A cysteine desulfurase YP_001210079.1 1244308 R 246195 CDS YP_001210080.1 146329402 5122362 complement(1245574..1246671) 1 NC_009446.1 identified by match to protein family HMM PF01571; match to protein family HMM PF08669; match to protein family HMM TIGR00528; glycine cleavage system T protein 1246671 gcvT 5122362 gcvT Dichelobacter nodosus VCS1703A glycine cleavage system T protein YP_001210080.1 1245574 R 246195 CDS YP_001210081.1 146329545 5122249 1246882..1247100 1 NC_009446.1 identified by match to protein family HMM PF00575; match to protein family HMM PF01176; match to protein family HMM TIGR00008; translation initiation factor IF-1 1247100 infA 5122249 infA Dichelobacter nodosus VCS1703A translation initiation factor IF-1 YP_001210081.1 1246882 D 246195 CDS YP_001210082.1 146329488 5122640 complement(1247157..1247648) 1 NC_009446.1 hypothetical protein 1247648 5122640 DNO_1199 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210082.1 1247157 R 246195 CDS YP_001210083.1 146329904 5122716 complement(1247658..1249112) 1 NC_009446.1 identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 1249112 pyk 5122716 pyk Dichelobacter nodosus VCS1703A pyruvate kinase YP_001210083.1 1247658 R 246195 CDS YP_001210084.1 146329336 5122196 complement(1249123..1249704) 1 NC_009446.1 identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase 1249704 5122196 DNO_1201 Dichelobacter nodosus VCS1703A 5-formyltetrahydrofolate cyclo-ligase YP_001210084.1 1249123 R 246195 CDS YP_001210085.1 146329120 5122648 1249808..1250392 1 NC_009446.1 identified by match to protein family HMM PF01510; N-acetyl-anhydromuranmyl-L-alanine amidase 1250392 ampD 5122648 ampD Dichelobacter nodosus VCS1703A N-acetyl-anhydromuranmyl-L-alanine amidase YP_001210085.1 1249808 D 246195 CDS YP_001210086.1 146329019 5122628 1250434..1251303 1 NC_009446.1 hypothetical protein 1251303 5122628 DNO_1203 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210086.1 1250434 D 246195 CDS YP_001210087.1 146329694 5122752 1251336..1251848 1 NC_009446.1 identified by match to protein family HMM PF02620; hypothetical protein 1251848 5122752 DNO_1204 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210087.1 1251336 D 246195 CDS YP_001210088.1 146329315 5123281 1251849..1252052 1 NC_009446.1 identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; 50S ribosomal protein L32 1252052 rpmF 5123281 rpmF Dichelobacter nodosus VCS1703A 50S ribosomal protein L32 YP_001210088.1 1251849 D 246195 CDS YP_001210089.1 146329224 5122895 1252075..1253112 1 NC_009446.1 identified by match to protein family HMM PF02504; match to protein family HMM TIGR00182; fatty acid-phospholipid synthesis protein PlsX 1253112 plsX 5122895 plsX Dichelobacter nodosus VCS1703A fatty acid-phospholipid synthesis protein PlsX YP_001210089.1 1252075 D 246195 CDS YP_001210090.1 146329454 5122835 1253127..1254095 1 NC_009446.1 identified by match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747; 3-oxoacyl-(acyl-carrier-protein) synthase III 1254095 fabH 5122835 fabH Dichelobacter nodosus VCS1703A 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001210090.1 1253127 D 246195 CDS YP_001210091.1 146329534 5122743 1254109..1255041 1 NC_009446.1 identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 1255041 fabD 5122743 fabD Dichelobacter nodosus VCS1703A malonyl CoA-acyl carrier protein transacylase YP_001210091.1 1254109 D 246195 CDS YP_001210092.1 146329068 5122592 1255046..1255780 1 NC_009446.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; match to protein family HMM TIGR01830; 3-oxoacyl-(acyl-carrier-protein) reductase 1255780 fabG 5122592 fabG Dichelobacter nodosus VCS1703A 3-oxoacyl-(acyl-carrier-protein) reductase YP_001210092.1 1255046 D 246195 CDS YP_001210093.1 146329614 5123293 1255845..1256075 1 NC_009446.1 identified by match to protein family HMM PF00550; match to protein family HMM TIGR00517; acyl carrier protein 1256075 acpP 5123293 acpP Dichelobacter nodosus VCS1703A acyl carrier protein YP_001210093.1 1255845 D 246195 CDS YP_001210094.1 146329652 5122417 1256240..1257505 1 NC_009446.1 identified by match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM TIGR03150; 3-oxoacyl-(acyl-carrier-protein) synthase II 1257505 fabF 5122417 fabF Dichelobacter nodosus VCS1703A 3-oxoacyl-(acyl-carrier-protein) synthase II YP_001210094.1 1256240 D 246195 CDS YP_001210095.1 146328915 5122560 1257502..1258515 1 NC_009446.1 identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; aminodeoxychorismate lyase family protein 1258515 5122560 DNO_1212 Dichelobacter nodosus VCS1703A aminodeoxychorismate lyase family protein YP_001210095.1 1257502 D 246195 CDS YP_001210096.1 146329656 5122751 1258505..1259116 1 NC_009446.1 identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; thymidylate kinase 1259116 tmk 5122751 tmk Dichelobacter nodosus VCS1703A thymidylate kinase YP_001210096.1 1258505 D 246195 CDS YP_001210097.1 146329436 5122562 1259113..1260063 1 NC_009446.1 identified by match to protein family HMM PF00627; DNA polymerase III subunit delta' 1260063 holB 5122562 holB Dichelobacter nodosus VCS1703A DNA polymerase III subunit delta' YP_001210097.1 1259113 D 246195 CDS YP_001210098.1 146328723 5123055 1260060..1260422 1 NC_009446.1 type IV fimbrial biogenesis protein PilZ 1260422 pilZ 5123055 pilZ Dichelobacter nodosus VCS1703A type IV fimbrial biogenesis protein PilZ YP_001210098.1 1260060 D 246195 CDS YP_001210099.1 146328865 5122423 1260598..1261626 1 NC_009446.1 identified by match to protein family HMM PF03741; TerC family protein 1261626 5122423 DNO_1216 Dichelobacter nodosus VCS1703A TerC family protein YP_001210099.1 1260598 D 246195 CDS YP_001210100.1 146329473 5122277 complement(1261632..1263170) 1 NC_009446.1 identified by match to protein family HMM PF04262; match to protein family HMM TIGR01434; glutamate--cysteine ligase 1263170 gshA 5122277 gshA Dichelobacter nodosus VCS1703A glutamate--cysteine ligase YP_001210100.1 1261632 R 246195 CDS YP_001210101.1 146329059 5122688 1263258..1264205 1 NC_009446.1 identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM PF08443; match to protein family HMM TIGR01380; glutathione synthetase 1264205 gshB 5122688 gshB Dichelobacter nodosus VCS1703A glutathione synthetase YP_001210101.1 1263258 D 246195 CDS YP_001210102.1 146329687 5122858 1264393..1264518 1 NC_009446.1 hypothetical protein 1264518 5122858 DNO_1219 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210102.1 1264393 D 246195 CDS YP_001210103.1 146329196 5123092 complement(1264955..1265635) 1 NC_009446.1 identified by match to protein family HMM TIGR01198; 6-phosphogluconolactonase 1265635 pgl 5123092 pgl Dichelobacter nodosus VCS1703A 6-phosphogluconolactonase YP_001210103.1 1264955 R 246195 CDS YP_001210104.1 146328756 5123062 complement(1265636..1267105) 1 NC_009446.1 identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871; glucose-6-phosphate 1-dehydrogenase 1267105 zwf 5123062 zwf Dichelobacter nodosus VCS1703A glucose-6-phosphate 1-dehydrogenase YP_001210104.1 1265636 R 246195 CDS YP_001210105.1 146329544 5122204 complement(1267137..1267832) 1 NC_009446.1 hypothetical protein 1267832 5122204 DNO_1224 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210105.1 1267137 R 246195 CDS YP_001210106.1 146328814 5122652 complement(1267630..1268832) 1 NC_009446.1 identified by match to protein family HMM PF04536; hypothetical protein 1268832 5122652 DNO_1225 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210106.1 1267630 R 246195 CDS YP_001210107.1 146329340 5123428 complement(1268849..1269454) 1 NC_009446.1 identified by match to protein family HMM PF04011; lipoprotein 1269454 5123428 DNO_1226 Dichelobacter nodosus VCS1703A lipoprotein YP_001210107.1 1268849 R 246195 CDS YP_001210108.1 146328941 5123168 1269634..1270047 1 NC_009446.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1270047 5123168 DNO_1227 Dichelobacter nodosus VCS1703A rhodanese-like domain-containing protein YP_001210108.1 1269634 D 246195 CDS YP_001210109.1 146329236 5122662 1270088..1271335 1 NC_009446.1 identified by match to protein family HMM PF02687; ABC-type lipoprotein releasing system protein LolC 1271335 5122662 DNO_1228 Dichelobacter nodosus VCS1703A ABC-type lipoprotein releasing system protein LolC YP_001210109.1 1270088 D 246195 CDS YP_001210110.1 146329625 5123110 1271328..1272026 1 NC_009446.1 identified by match to protein family HMM PF00005; lipoprotein releasing system ATP-binding protein LolD 1272026 5123110 DNO_1229 Dichelobacter nodosus VCS1703A lipoprotein releasing system ATP-binding protein LolD YP_001210110.1 1271328 D 246195 CDS YP_001210111.1 146329043 5123377 complement(1272077..1272361) 1 NC_009446.1 identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; competence ComEA family protein 1272361 5123377 DNO_1230 Dichelobacter nodosus VCS1703A competence ComEA family protein YP_001210111.1 1272077 R 246195 CDS YP_001210112.1 146328848 5122407 complement(1277880..1279322) 1 NC_009446.1 identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00873; 6-phosphogluconate dehydrogenase 1279322 gnd 5122407 gnd Dichelobacter nodosus VCS1703A 6-phosphogluconate dehydrogenase YP_001210112.1 1277880 R 246195 CDS YP_001210113.1 146329539 5122576 complement(1279319..1280170) 1 NC_009446.1 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 1280170 folP 5122576 folP Dichelobacter nodosus VCS1703A dihydropteroate synthase YP_001210113.1 1279319 R 246195 CDS YP_001210114.1 146329792 5122605 complement(1280170..1282092) 1 NC_009446.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent protease FtsH 1282092 ftsH 5122605 ftsH Dichelobacter nodosus VCS1703A ATP-dependent protease FtsH YP_001210114.1 1280170 R 246195 CDS YP_001210115.1 146329213 5122456 complement(1282125..1282757) 1 NC_009446.1 identified by match to protein family HMM PF01728; 23S rRNA methyltransferase 1282757 rrmJ 5122456 rrmJ Dichelobacter nodosus VCS1703A 23S rRNA methyltransferase YP_001210115.1 1282125 R 246195 CDS YP_001210116.1 146329304 5123011 1282806..1283102 1 NC_009446.1 identified by match to protein family HMM PF01985; YhbY family protein 1283102 5123011 DNO_1240 Dichelobacter nodosus VCS1703A YhbY family protein YP_001210116.1 1282806 D 246195 CDS YP_001210117.1 146328940 5122929 complement(1283149..1284618) 1 NC_009446.1 lipoprotein 1284618 5122929 DNO_1241 Dichelobacter nodosus VCS1703A lipoprotein YP_001210117.1 1283149 R 246195 CDS YP_001210118.1 146329378 5122658 complement(1284630..1284776) 1 NC_009446.1 hypothetical protein 1284776 5122658 DNO_1242 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210118.1 1284630 R 246195 CDS YP_001210119.1 146329108 5123031 complement(1284856..1285323) 1 NC_009446.1 identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; hypothetical protein 1285323 5123031 DNO_1243 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210119.1 1284856 R 246195 CDS YP_001210120.1 146329463 5122426 complement(1285304..1286296) 1 NC_009446.1 identified by match to protein family HMM PF02562; phospahte starvation induced protein PhoH 1286296 phoH 5122426 phoH Dichelobacter nodosus VCS1703A phospahte starvation induced protein PhoH YP_001210120.1 1285304 R 246195 CDS YP_001210121.1 146329852 5122130 complement(1286381..1287751) 1 NC_009446.1 identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; tRNA-i(6)A37 thiotransferase enzyme MiaB 1287751 miaB 5122130 miaB Dichelobacter nodosus VCS1703A tRNA-i(6)A37 thiotransferase enzyme MiaB YP_001210121.1 1286381 R 246195 CDS YP_001210122.1 146328951 5122181 complement(1287818..1288327) 1 NC_009446.1 identified by match to protein family HMM PF08238; hypothetical protein 1288327 5122181 DNO_1246 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210122.1 1287818 R 246195 CDS YP_001210123.1 146329717 5122614 complement(1288339..1289007) 1 NC_009446.1 identified by match to protein family HMM PF02390; match to protein family HMM TIGR00091; tRNA (guanine-N(7)-)-methyltransferase 1289007 trmB 5122614 trmB Dichelobacter nodosus VCS1703A tRNA (guanine-N(7)-)-methyltransferase YP_001210123.1 1288339 R 246195 CDS YP_001210124.1 146328939 5123066 complement(1289019..1289807) 1 NC_009446.1 identified by match to protein family HMM PF02649; hypothetical protein 1289807 5123066 DNO_1248 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210124.1 1289019 R 246195 CDS YP_001210125.1 146328706 5122670 complement(1289903..1290940) 1 NC_009446.1 identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109; ferrochelatase 1290940 hemH 5122670 hemH Dichelobacter nodosus VCS1703A ferrochelatase YP_001210125.1 1289903 R 246195 CDS YP_001210126.1 146329745 5123021 complement(1291005..1291376) 1 NC_009446.1 identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059; 50S ribosomal protein L17 1291376 rplQ 5123021 rplQ Dichelobacter nodosus VCS1703A 50S ribosomal protein L17 YP_001210126.1 1291005 R 246195 CDS YP_001210127.1 146329031 5123358 complement(1291403..1292365) 1 NC_009446.1 identified by match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027; DNA-directed RNA polymerase subunit alpha 1292365 rpoA 5123358 rpoA Dichelobacter nodosus VCS1703A DNA-directed RNA polymerase subunit alpha YP_001210127.1 1291403 R 246195 CDS YP_001210128.1 146329810 5122768 complement(1292397..1293017) 1 NC_009446.1 identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 1293017 rpsD 5122768 rpsD Dichelobacter nodosus VCS1703A 30S ribosomal protein S4 YP_001210128.1 1292397 R 246195 CDS YP_001210129.1 146329270 5122559 complement(1293033..1293431) 1 NC_009446.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1293431 rpsK 5122559 rpsK Dichelobacter nodosus VCS1703A 30S ribosomal protein S11 YP_001210129.1 1293033 R 246195 CDS YP_001210130.1 146329476 5123256 complement(1293449..1293805) 1 NC_009446.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1293805 rpsM 5123256 rpsM Dichelobacter nodosus VCS1703A 30S ribosomal protein S13 YP_001210130.1 1293449 R 246195 CDS YP_001210131.1 146328808 5122637 complement(1293915..1295243) 1 NC_009446.1 identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase subunit SecY 1295243 secY 5122637 secY Dichelobacter nodosus VCS1703A preprotein translocase subunit SecY YP_001210131.1 1293915 R 246195 CDS YP_001210132.1 146329553 5123435 complement(1295272..1295706) 1 NC_009446.1 identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 1295706 rplO 5123435 rplO Dichelobacter nodosus VCS1703A 50S ribosomal protein L15 YP_001210132.1 1295272 R 246195 CDS YP_001210133.1 146329672 5122593 complement(1295709..1295894) 1 NC_009446.1 identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308; 50S ribosomal protein L30 1295894 rpmD 5122593 rpmD Dichelobacter nodosus VCS1703A 50S ribosomal protein L30 YP_001210133.1 1295709 R 246195 CDS YP_001210134.1 146329095 5122345 complement(1295884..1296399) 1 NC_009446.1 identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 1296399 rpsE 5122345 rpsE Dichelobacter nodosus VCS1703A 30S ribosomal protein S5 YP_001210134.1 1295884 R 246195 CDS YP_001210135.1 146329419 5122244 complement(1296409..1296765) 1 NC_009446.1 identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 1296765 rplR 5122244 rplR Dichelobacter nodosus VCS1703A 50S ribosomal protein L18 YP_001210135.1 1296409 R 246195 CDS YP_001210136.1 146328802 5122529 complement(1296781..1297314) 1 NC_009446.1 identified by match to protein family HMM PF00347; 50S ribosomal protein L6 1297314 rplF 5122529 rplF Dichelobacter nodosus VCS1703A 50S ribosomal protein L6 YP_001210136.1 1296781 R 246195 CDS YP_001210137.1 146329053 5123442 complement(1297327..1297716) 1 NC_009446.1 identified by match to protein family HMM PF00410; 30S ribosomal protein S8 1297716 rpsH 5123442 rpsH Dichelobacter nodosus VCS1703A 30S ribosomal protein S8 YP_001210137.1 1297327 R 246195 CDS YP_001210138.1 146329663 5122144 complement(1297787..1298095) 1 NC_009446.1 identified by match to protein family HMM PF00253; 30S ribosomal protein S14 1298095 rpsN 5122144 rpsN Dichelobacter nodosus VCS1703A 30S ribosomal protein S14 YP_001210138.1 1297787 R 246195 CDS YP_001210139.1 146329604 5122542 complement(1298100..1298639) 1 NC_009446.1 identified by match to protein family HMM PF00281; match to protein family HMM PF00673; 50S ribosomal protein L5 1298639 rplE 5122542 rplE Dichelobacter nodosus VCS1703A 50S ribosomal protein L5 YP_001210139.1 1298100 R 246195 CDS YP_001210140.1 146329140 5122241 complement(1298647..1298961) 1 NC_009446.1 identified by match to protein family HMM TIGR01079; 50S ribosomal protein L24 1298961 rplX 5122241 rplX Dichelobacter nodosus VCS1703A 50S ribosomal protein L24 YP_001210140.1 1298647 R 246195 CDS YP_001210141.1 146329084 5123049 complement(1298976..1299344) 1 NC_009446.1 identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067; 50S ribosomal protein L14 1299344 rplN 5123049 rplN Dichelobacter nodosus VCS1703A 50S ribosomal protein L14 YP_001210141.1 1298976 R 246195 CDS YP_001210142.1 146329671 5122289 complement(1299357..1299620) 1 NC_009446.1 identified by match to protein family HMM PF00366; 30S ribosomal protein S17 1299620 rpsQ 5122289 rpsQ Dichelobacter nodosus VCS1703A 30S ribosomal protein S17 YP_001210142.1 1299357 R 246195 CDS YP_001210143.1 146328866 5123290 complement(1299624..1299818) 1 NC_009446.1 identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; 50S ribosomal protein L29 1299818 rpmC 5123290 rpmC Dichelobacter nodosus VCS1703A 50S ribosomal protein L29 YP_001210143.1 1299624 R 246195 CDS YP_001210144.1 146329501 5122843 complement(1299818..1300231) 1 NC_009446.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1300231 rplP 5122843 rplP Dichelobacter nodosus VCS1703A 50S ribosomal protein L16 YP_001210144.1 1299818 R 246195 CDS YP_001210145.1 146328784 5122727 complement(1300244..1300963) 1 NC_009446.1 identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 1300963 rpsC 5122727 rpsC Dichelobacter nodosus VCS1703A 30S ribosomal protein S3 YP_001210145.1 1300244 R 246195 CDS YP_001210146.1 146329359 5123464 complement(1300976..1301308) 1 NC_009446.1 identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 1301308 rplV 5123464 rplV Dichelobacter nodosus VCS1703A 50S ribosomal protein L22 YP_001210146.1 1300976 R 246195 CDS YP_001210147.1 146328874 5122311 complement(1301318..1301593) 1 NC_009446.1 identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050; 30S ribosomal protein S19 1301593 rpsS 5122311 rpsS Dichelobacter nodosus VCS1703A 30S ribosomal protein S19 YP_001210147.1 1301318 R 246195 CDS YP_001210148.1 146329449 5122298 complement(1301596..1302426) 1 NC_009446.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1302426 rplB 5122298 rplB Dichelobacter nodosus VCS1703A 50S ribosomal protein L2 YP_001210148.1 1301596 R 246195 CDS YP_001210149.1 146328778 5123388 complement(1302439..1302741) 1 NC_009446.1 identified by match to protein family HMM PF00276; 50S ribosomal protein L23 1302741 rplW 5123388 rplW Dichelobacter nodosus VCS1703A 50S ribosomal protein L23 YP_001210149.1 1302439 R 246195 CDS YP_001210150.1 146329829 5122398 complement(1302738..1303346) 1 NC_009446.1 identified by match to protein family HMM PF00573; 50S ribosomal protein L4 1303346 rplD 5122398 rplD Dichelobacter nodosus VCS1703A 50S ribosomal protein L4 YP_001210150.1 1302738 R 246195 CDS YP_001210151.1 146329256 5122224 complement(1303356..1303994) 1 NC_009446.1 identified by match to protein family HMM PF00297; 50S ribosomal protein L3 1303994 rplC 5122224 rplC Dichelobacter nodosus VCS1703A 50S ribosomal protein L3 YP_001210151.1 1303356 R 246195 CDS YP_001210152.1 146329668 5122815 complement(1304084..1304398) 1 NC_009446.1 identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049; 30S ribosomal protein S10 1304398 rpsJ 5122815 rpsJ Dichelobacter nodosus VCS1703A 30S ribosomal protein S10 YP_001210152.1 1304084 R 246195 CDS YP_001210153.1 146329077 5122410 complement(1304404..1305594) 1 NC_009446.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1305594 tufA 5122410 tufA Dichelobacter nodosus VCS1703A elongation factor Tu YP_001210153.1 1304404 R 246195 CDS YP_001210154.1 146329424 5122418 complement(1305612..1307711) 1 NC_009446.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G 1307711 fusA 5122418 fusA Dichelobacter nodosus VCS1703A translation elongation factor G YP_001210154.1 1305612 R 246195 CDS YP_001210155.1 146328666 5122959 complement(1307742..1308212) 1 NC_009446.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1308212 rpsG 5122959 rpsG Dichelobacter nodosus VCS1703A 30S ribosomal protein S7 YP_001210155.1 1307742 R 246195 CDS YP_001210156.1 146328890 5123001 complement(1308230..1308604) 1 NC_009446.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1308604 rpsL 5123001 rpsL Dichelobacter nodosus VCS1703A 30S ribosomal protein S12 YP_001210156.1 1308230 R 246195 CDS YP_001210157.1 146329118 5122340 complement(1308698..1312906) 1 NC_009446.1 identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase subunit beta' 1312906 rpoC 5122340 rpoC Dichelobacter nodosus VCS1703A DNA-directed RNA polymerase subunit beta' YP_001210157.1 1308698 R 246195 CDS YP_001210158.1 146329600 5122639 complement(1312926..1317011) 1 NC_009446.1 identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase subunit beta 1317011 rpoB 5122639 rpoB Dichelobacter nodosus VCS1703A DNA-directed RNA polymerase subunit beta YP_001210158.1 1312926 R 246195 CDS YP_001210159.1 146329892 5122330 complement(1317177..1317545) 1 NC_009446.1 identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 1317545 rplL 5122330 rplL Dichelobacter nodosus VCS1703A 50S ribosomal protein L7/L12 YP_001210159.1 1317177 R 246195 CDS YP_001210160.1 146329129 5122226 complement(1317594..1318097) 1 NC_009446.1 identified by match to protein family HMM PF00466; 50S ribosomal protein L10 1318097 rplJ 5122226 rplJ Dichelobacter nodosus VCS1703A 50S ribosomal protein L10 YP_001210160.1 1317594 R 246195 CDS YP_001210161.1 146329101 5122643 complement(1318266..1318964) 1 NC_009446.1 identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 1318964 rplA 5122643 rplA Dichelobacter nodosus VCS1703A 50S ribosomal protein L1 YP_001210161.1 1318266 R 246195 CDS YP_001210162.1 146329649 5123263 complement(1318969..1319397) 1 NC_009446.1 identified by match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632; 50S ribosomal protein L11 1319397 rplK 5123263 rplK Dichelobacter nodosus VCS1703A 50S ribosomal protein L11 YP_001210162.1 1318969 R 246195 CDS YP_001210163.1 146329117 5122488 complement(1319440..1319976) 1 NC_009446.1 identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination-antitermination factor NusG 1319976 nusG 5122488 nusG Dichelobacter nodosus VCS1703A transcription termination-antitermination factor NusG YP_001210163.1 1319440 R 246195 CDS YP_001210164.1 146328849 5122645 complement(1319977..1320348) 1 NC_009446.1 identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; Preprotein translocase subunit SecE 1320348 secE 5122645 secE Dichelobacter nodosus VCS1703A Preprotein translocase subunit SecE YP_001210164.1 1319977 R 246195 CDS YP_001210165.1 146329157 5122988 complement(1322059..1322868) 1 NC_009446.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 1322868 apaH 5122988 apaH Dichelobacter nodosus VCS1703A diadenosine tetraphosphatase YP_001210165.1 1322059 R 246195 CDS YP_001210166.1 146329220 5123145 1322898..1323692 1 NC_009446.1 identified by match to protein family HMM PF00248; aldo/keto reductase family protein 1323692 5123145 DNO_1295 Dichelobacter nodosus VCS1703A aldo/keto reductase family protein YP_001210166.1 1322898 D 246195 CDS YP_001210167.1 146329045 5123045 1323667..1324923 1 NC_009446.1 identified by match to protein family HMM PF04413; 3-deoxy-D-manno-octulosonic-acid transferase 1324923 kdtA 5123045 kdtA Dichelobacter nodosus VCS1703A 3-deoxy-D-manno-octulosonic-acid transferase YP_001210167.1 1323667 D 246195 CDS YP_001210168.1 146329520 5122140 complement(1324972..1325511) 1 NC_009446.1 identified by match to protein family HMM PF00258; match to protein family HMM TIGR01752; flavodoxin 1325511 fld 5122140 fld Dichelobacter nodosus VCS1703A flavodoxin YP_001210168.1 1324972 R 246195 CDS YP_001210169.1 146329762 5122543 complement(1325545..1326420) 1 NC_009446.1 identified by match to protein family HMM PF00763; match to protein family HMM PF02882; methylenetetrahydrofolate dehydrogenase 1326420 folD 5122543 folD Dichelobacter nodosus VCS1703A methylenetetrahydrofolate dehydrogenase YP_001210169.1 1325545 R 246195 CDS YP_001210170.1 146329540 5123341 complement(1326469..1326882) 1 NC_009446.1 identified by match to protein family HMM PF01230; histidine triad domain-containing protein 1326882 5123341 DNO_1299 Dichelobacter nodosus VCS1703A histidine triad domain-containing protein YP_001210170.1 1326469 R 246195 CDS YP_001210171.1 146329111 5122604 complement(1326938..1327243) 1 NC_009446.1 hypothetical protein 1327243 5122604 DNO_1300 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210171.1 1326938 R 246195 CDS YP_001210172.1 146329660 5122671 complement(1327462..1327791) 1 NC_009446.1 identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; glutaredoxin-like protein 1327791 5122671 DNO_1301 Dichelobacter nodosus VCS1703A glutaredoxin-like protein YP_001210172.1 1327462 R 246195 CDS YP_001210173.1 146329738 5122567 complement(1327812..1329248) 1 NC_009446.1 identified by match to protein family HMM PF04575; lipoprotein 1329248 5122567 DNO_1302 Dichelobacter nodosus VCS1703A lipoprotein YP_001210173.1 1327812 R 246195 CDS YP_001210174.1 146329025 5123365 complement(1329353..1331938) 1 NC_009446.1 identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070; DNA mismatch repair protein MutS 1331938 mutS 5123365 mutS Dichelobacter nodosus VCS1703A DNA mismatch repair protein MutS YP_001210174.1 1329353 R 246195 CDS YP_001210175.1 146329198 5122694 complement(1332047..1332331) 1 NC_009446.1 identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; competence protein ComEA-related protein 1332331 5122694 DNO_1304 Dichelobacter nodosus VCS1703A competence protein ComEA-related protein YP_001210175.1 1332047 R 246195 CDS YP_001210176.1 146329582 5123091 complement(1337830..1338666) 1 NC_009446.1 competence protein ComL 1338666 comL 5123091 comL Dichelobacter nodosus VCS1703A competence protein ComL YP_001210176.1 1337830 R 246195 CDS YP_001210177.1 146328697 5123033 1338713..1339681 1 NC_009446.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase, RluD 1339681 rluD 5123033 rluD Dichelobacter nodosus VCS1703A ribosomal large subunit pseudouridine synthase, RluD YP_001210177.1 1338713 D 246195 CDS YP_001210178.1 146328975 5123014 1339831..1340991 1 NC_009446.1 identified by match to protein family HMM PF00549; match to protein family HMM PF08442; match to protein family HMM TIGR01016; succinyl-CoA synthetase, beta subunit 1340991 suC 5123014 suC Dichelobacter nodosus VCS1703A succinyl-CoA synthetase, beta subunit YP_001210178.1 1339831 D 246195 CDS YP_001210179.1 146328935 5122174 1341001..1341873 1 NC_009446.1 identified by match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019; succinyl-CoA synthetase, alpha subunit 1341873 sucD 5122174 sucD Dichelobacter nodosus VCS1703A succinyl-CoA synthetase, alpha subunit YP_001210179.1 1341001 D 246195 CDS YP_001210180.1 146329512 5122679 1342014..1343549 1 NC_009446.1 identified by match to protein family HMM PF07690; permease 1343549 5122679 DNO_1314 Dichelobacter nodosus VCS1703A permease YP_001210180.1 1342014 D 246195 CDS YP_001210181.1 146328847 5123193 complement(1343550..1344560) 1 NC_009446.1 hypothetical protein 1344560 5123193 DNO_1315 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210181.1 1343550 R 246195 CDS YP_001210182.1 146328665 5122570 complement(1344612..1346801) 1 NC_009446.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1346801 rlmL 5122570 rlmL Dichelobacter nodosus VCS1703A 23S rRNA m(2)G2445 methyltransferase YP_001210182.1 1344612 R 246195 CDS YP_001210183.1 146329119 5122527 complement(1346829..1347515) 1 NC_009446.1 thiol:disulfide interchange protein DsbC 1347515 dsbC 5122527 dsbC Dichelobacter nodosus VCS1703A thiol:disulfide interchange protein DsbC YP_001210183.1 1346829 R 246195 CDS YP_001210184.1 146329843 5122624 complement(1347633..1348106) 1 NC_009446.1 identified by match to protein family HMM PF00210; Dps family protein 1348106 5122624 DNO_1318 Dichelobacter nodosus VCS1703A Dps family protein YP_001210184.1 1347633 R 246195 CDS YP_001210185.1 146329492 5123122 complement(1348187..1349074) 1 NC_009446.1 identified by match to protein family HMM PF00498; hypothetical protein 1349074 5123122 DNO_1319 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210185.1 1348187 R 246195 CDS YP_001210186.1 146328873 5122711 complement(1349062..1350333) 1 NC_009446.1 identified by match to protein family HMM PF00089; trypsin-like serine and cysteine protease family protein 1350333 5122711 DNO_1320 Dichelobacter nodosus VCS1703A trypsin-like serine and cysteine protease family protein YP_001210186.1 1349062 R 246195 CDS YP_001210187.1 146328884 5122975 complement(1350330..1351532) 1 NC_009446.1 identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase 1351532 tyrS 5122975 tyrS Dichelobacter nodosus VCS1703A tyrosyl-tRNA synthetase YP_001210187.1 1350330 R 246195 CDS YP_001210188.1 146329106 5122183 1351854..1352918 1 NC_009446.1 identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein 1352918 5122183 DNO_1322 Dichelobacter nodosus VCS1703A M23 peptidase domain-containing protein YP_001210188.1 1351854 D 246195 CDS YP_001210189.1 146329681 5123005 1352919..1354001 1 NC_009446.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1354001 anmK 5123005 anmK Dichelobacter nodosus VCS1703A anhydro-N-acetylmuramic acid kinase YP_001210189.1 1352919 D 246195 CDS YP_001210190.1 146329033 5123047 1354024..1354392 1 NC_009446.1 identified by match to protein family HMM PF02537; camphor resistance (CrcB) family protein 1354392 5123047 DNO_1324 Dichelobacter nodosus VCS1703A camphor resistance (CrcB) family protein YP_001210190.1 1354024 D 246195 CDS YP_001210191.1 146328826 5122772 1354457..1355548 1 NC_009446.1 identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092; GTP-binding protein 1355548 ychF 5122772 ychF Dichelobacter nodosus VCS1703A GTP-binding protein YP_001210191.1 1354457 D 246195 CDS YP_001210192.1 146329504 5123413 1355571..1356140 1 NC_009446.1 identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038; translation elongation factor P 1356140 efp 5123413 efp Dichelobacter nodosus VCS1703A translation elongation factor P YP_001210192.1 1355571 D 246195 CDS YP_001210193.1 146329521 5122832 1356161..1356754 1 NC_009446.1 lipoprotein 1356754 5122832 DNO_1327 Dichelobacter nodosus VCS1703A lipoprotein YP_001210193.1 1356161 D 246195 CDS YP_001210194.1 146329456 5122487 1356913..1357230 1 NC_009446.1 hypothetical protein 1357230 5122487 DNO_1328 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210194.1 1356913 D 246195 CDS YP_001210195.1 146329247 5122779 1357317..1357841 1 NC_009446.1 lipoprotein 1357841 5122779 DNO_1329 Dichelobacter nodosus VCS1703A lipoprotein YP_001210195.1 1357317 D 246195 CDS YP_001210196.1 146329332 5123407 1357909..1358511 1 NC_009446.1 identified by match to protein family HMM PF01694; GlpG-like proten 1358511 5123407 DNO_1330 Dichelobacter nodosus VCS1703A GlpG-like proten YP_001210196.1 1357909 D 246195 CDS YP_001210197.1 146329104 5122131 complement(1358566..1358922) 1 NC_009446.1 identified by match to protein family HMM PF01042; endoribonuclease L-PSP family protein 1358922 5122131 DNO_1331 Dichelobacter nodosus VCS1703A endoribonuclease L-PSP family protein YP_001210197.1 1358566 R 246195 CDS YP_001210198.1 146328900 5122243 complement(1358935..1359972) 1 NC_009446.1 identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464; uroporphyrinogen decarboxylase 1359972 hemE 5122243 hemE Dichelobacter nodosus VCS1703A uroporphyrinogen decarboxylase YP_001210198.1 1358935 R 246195 CDS YP_001210199.1 146329598 5122806 complement(1360155..1360904) 1 NC_009446.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase activating enzyme 1360904 pflA 5122806 pflA Dichelobacter nodosus VCS1703A pyruvate formate-lyase activating enzyme YP_001210199.1 1360155 R 246195 CDS YP_001210200.1 146328922 5123152 complement(1360990..1363287) 1 NC_009446.1 identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; pyruvate-formate lyase 1363287 pflB 5123152 pflB Dichelobacter nodosus VCS1703A pyruvate-formate lyase YP_001210200.1 1360990 R 246195 CDS YP_001210201.1 146329241 5122728 1363787..1364794 1 NC_009446.1 identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658; ornithine carbamoyltransferase 1364794 argF-2 5122728 argF-2 Dichelobacter nodosus VCS1703A ornithine carbamoyltransferase YP_001210201.1 1363787 D 246195 CDS YP_001210202.1 146329807 5122956 1364795..1365949 1 NC_009446.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM TIGR00275; hypothetical protein 1365949 5122956 DNO_1336 Dichelobacter nodosus VCS1703A hypothetical protein YP_001210202.1 1364795 D 246195 CDS YP_001210203.1 146328656 5123306 1365983..1366891 1 NC_009446.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; HAD-superfamily hydrolase 1366891 5123306 DNO_1337 Dichelobacter nodosus VCS1703A HAD-superfamily hydrolase YP_001210203.1 1365983 D 246195 CDS YP_001210204.1 146329240 5123269 1366930..1369083 1 NC_009446.1 identified by match to protein family HMM PF00326; match to protein family HMM PF02897; prolyl oligopeptidase 1369083 ptrB 5123269 ptrB Dichelobacter nodosus VCS1703A prolyl oligopeptidase YP_001210204.1 1366930 D 246195 CDS YP_001210205.1 146329105 5122903 complement(1369141..1370784) 1 NC_009446.1 identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348; chaperonin GroEL 1370784 groEL 5122903 groEL Dichelobacter nodosus VCS1703A chaperonin GroEL YP_001210205.1 1369141 R 246195 CDS YP_001210206.1 146329116 5122233 complement(1370809..1371096) 1 NC_009446.1 identified by match to protein family HMM PF00166; co-chaperonin GroES 1371096 groES 5122233 groES Dichelobacter nodosus VCS1703A co-chaperonin GroES YP_001210206.1 1370809 R 246195 CDS YP_001210207.1 146329804 5122654 complement(1371401..1372546) 1 NC_009446.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 1372546 5122654 DNO_1341 Dichelobacter nodosus VCS1703A IS605 family transposase YP_001210207.1 1371401 R 246195 CDS YP_001210208.1 146329217 5122467 1372591..1373007 1 NC_009446.1 identified by match to protein family HMM PF01797; IS200 family transposase 1373007 5122467 DNO_1342 Dichelobacter nodosus VCS1703A IS200 family transposase YP_001210208.1 1372591 D 246195 CDS YP_001210209.1 146329433 5123084 complement(1373146..1373895) 1 NC_009446.1 extracellular solute-binding protein 1373895 5123084 DNO_1343 Dichelobacter nodosus VCS1703A extracellular solute-binding protein YP_001210209.1 1373146 R 246195 CDS YP_001210210.1 146328821 5122911 1374220..1374864 1 NC_009446.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 1374864 5122911 DNO_1344 Dichelobacter nodosus VCS1703A phosphoglycerate mutase family protein YP_001210210.1 1374220 D 246195 CDS YP_001210211.1 146328693 5123418 1374870..1375607 1 NC_009446.1 extracellular solute-binding family protein 1375607 5123418 DNO_1345 Dichelobacter nodosus VCS1703A extracellular solute-binding family protein YP_001210211.1 1374870 D 246195 CDS YP_001210212.1 146329277 5122307 1375756..1376298 1 NC_009446.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1376298 hslV 5122307 hslV Dichelobacter nodosus VCS1703A ATP-dependent protease peptidase subunit YP_001210212.1 1375756 D 246195 CDS YP_001210213.1 146329822 5123230 1376300..1377655 1 NC_009446.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1377655 hslU 5123230 hslU Dichelobacter nodosus VCS1703A ATP-dependent protease ATP-binding subunit HslU YP_001210213.1 1376300 D 246195 CDS YP_001210214.1 146328771 5122928 1377828..1378439 1 NC_009446.1 identified by match to protein family HMM PF00081; match to protein family HMM PF02777; manganese superoxide dismutase 1378439 5122928 DNO_1348 Dichelobacter nodosus VCS1703A manganese superoxide dismutase YP_001210214.1 1377828 D 246195 CDS YP_001210215.1 146329358 5122765 1379097..1380332 1 NC_009446.1 identified by match to protein family HMM PF01490; serine transporter SdaC 1380332 sdaC 5122765 sdaC Dichelobacter nodosus VCS1703A serine transporter SdaC YP_001210215.1 1379097 D 246195 CDS YP_001210216.1 146328909 5122318 1380624..1381865 1 NC_009446.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1381865 pepT-2 5122318 pepT-2 Dichelobacter nodosus VCS1703A peptidase T YP_001210216.1 1380624 D 246195 CDS YP_001210217.1 146329228 5122777 1381989..1384148 1 NC_009446.1 identified by match to protein family HMM PF01432; peptidyl-dipeptidase I 1384148 dcpA 5122777 dcpA Dichelobacter nodosus VCS1703A peptidyl-dipeptidase I YP_001210217.1 1381989 D 246195 CDS YP_001210218.1 146329641 5122331 1384251..1386323 1 NC_009446.1 identified by match to protein family HMM PF01432; peptidyl-dipeptidase II 1386323 dcpB 5122331 dcpB Dichelobacter nodosus VCS1703A peptidyl-dipeptidase II YP_001210218.1 1384251 D 246195 CDS YP_001210219.1 146328746 5122526 1386469..1387866 1 NC_009446.1 responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 1387866 dcuC 5122526 dcuC Dichelobacter nodosus VCS1703A C4-dicarboxylate transporter DcuC YP_001210219.1 1386469 D 246195 CDS YP_001210220.1 146329489 5122830 1387885..1389291 1 NC_009446.1 responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 1389291 dcuC 5122830 dcuC Dichelobacter nodosus VCS1703A C4-dicarboxylate transporter DcuC YP_001210220.1 1387885 D 246195 CDS