-- dump date 20120504_143909 -- class Genbank::Gene -- table gene_note -- id note 1199188 This region contains an authentic frame shift and is not the result of a sequencing artifact; beta-glucoside operon antiterminator, authentic frameshift; similar to SP:P39805; identified by sequence similarity 1199297 This region contains an authentic frame shift and is not the result of a sequencing artifact; N-acyl-D-amino-acid deacylase family protein; similar to SP:P18021, SP:P06615, GB:X04967, PID:144169, and PID:147038; identified by sequence similarity 1199334 This region contains an authentic frame shift and is not the result of a sequencing artifact; ABC transporter ATP-binding protein, authentic frameshift; similar to SP:P75831, GB:M76991, and PID:141758; identified by sequence similarity 1199359 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; conserved hypothetical protein, degenerate; similar to GP:10119873; identified by sequence similarity 1199427 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; IS1216, transposase; similar to GP:2467239, and GP:2467229; identified by sequence similarity 1199432 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; IS1216, transposase, degenerate; similar to GB:D90314, and PID:216765; identified by sequence similarity 1199434 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; IS1216, transposase, authentic point mutation; similar to GP:2467239, and GP:2467239; identified by sequence similarity 1199440 This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; cytolysin B transport protein, truncation; similar to GP:148309, GB:D14662, SP:P30041, and PID:285949; identified by sequence similarity 1199447 This region contains an authentic frame shift and is not the result of a sequencing artifact; site-specific recombinase, resolvase family, authentic frameshift; similar to GB:X60036, GB:X77337, and SP:Q00325; identified by sequence similarity 1199448 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; uvrC protein, , authentic point mutation; similar to GP:2696020; identified by sequence similarity 1199451 This region contains an authentic frame shift and is not the result of a sequencing artifact; PTS system component, authentic frameshift; similar to GP:10173459; identified by sequence similarity 1199459 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; transposase, IS3 family, degenerate; similar to GB:Z30094, PID:1737212, PID:496609, PID:736404, and PID:736405; identified by sequence similarity 1199469 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; cytolysin immunity protein CylI, degenerate; similar to GP:4704565, and GP:4704565; identified by sequence similarity 1199499 This region contains an authentic frame shift and is not the result of a sequencing artifact; cell wall surface anchor family protein, authentic frameshift; similar to GP:21693365; identified by sequence similarity 1199502 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; conserved hypothetical protein, degenerate; similar to GP:10173296, and GP:10173296; identified by sequence similarity 1199506 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; transposase, IS3 family, degenerate; similar to GP:2605927, and GP:2605927; identified by sequence similarity 1199525 This region contains an authentic frame shift and is not the result of a sequencing artifact; PTS system component, authentic frameshift; identified by match to PFAM protein family HMM PF03613 1199551 This region contains an authentic frame shift and is not the result of a sequencing artifact; peptidase A, , authentic frameshift; similar to GP:6707657, and GP:6707657; identified by sequence similarity 1199570 This region contains a pseudogene, one or more premature stops, and is not the result of a sequencing artifact; ribosomal small subunit pseudouridine synthase A, ; similar to GP:10175896; identified by sequence similarity 1199579 This region contains a pseudogene, one or more premature stops, and is not the result of a sequencing artifact; ribosomal large subunit pseudouridine synthase, RluD subfamily; similar to GB:X74862, and PID:510996; identified by sequence similarity 1199714 This region contains a pseudogene, one or more premature stops, and is not the result of a sequencing artifact; ribosomal small subunit pseudouridine synthase A, ; similar to GP:10175896; identified by sequence similarity 1199895 This region contains an authentic frame shift and is not the result of a sequencing artifact; sugar fermentation stimulation protein, authentic frameshift; similar to GP:10173657; identified by sequence similarity 1199915 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; membrane protein, ; identified by match to PFAM protein family HMM PF03379 1199968 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; identified by Glimmer2 1200106 This region contains an authentic frame shift and is not the result of a sequencing artifact; transcriptional regulator, , authentic frameshift; similar to GB:M80629, PID:180492, GB:X72925, GB:Z34522, SP:Q08554, PID:457464, PID:505537, and PID:505538; identified by sequence similarity 1200154 This region contains an authentic frame shift and is not the result of a sequencing artifact; membrane protein, , authentic frameshift; similar to GP:10172693, and GP:4808349; identified by sequence similarity 1200221 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; conserved hypothetical protein, authentic point mutation; similar to SP:O32076, SP:P20628, and PID:142038; identified by sequence similarity 1200440 This region contains a pseudogene, one or more premature stops, and is not the result of a sequencing artifact; ribosomal large subunit pseudouridine synthase B; similar to GB:X12466, GB:M37716, GB:M15919, SP:P08578, PID:338267, PID:338269, and PID:35105; identified by sequence similarity 1200481 This region contains an authentic frame shift and is not the result of a sequencing artifact; transketolase, authentic frameshift; identified by match to PFAM protein family HMM PF00456 1200505 This region contains an authentic frame shift and is not the result of a sequencing artifact; PTS system component, authentic frameshift; similar to GP:10172909; identified by sequence similarity 1200527 This region contains an authentic frame shift and is not the result of a sequencing artifact; ethanolamine utilization protein EutA, ; similar to SP:Q9ZFV2, SP:P11886, GB:X14913, and PID:45506; identified by sequence similarity 1200614 This region contains a pseudogene, one or more premature stops, and is not the result of a sequencing artifact; ribosomal large subunit pseudouridine synthase D; similar to GP:10175162; identified by sequence similarity 1200652 This region contains an authentic frame shift and is not the result of a sequencing artifact; peptide chain release factor 2, programmed frameshift; identified by match to PFAM protein family HMM PF03462 1200716 This region contains an authentic frame shift and is not the result of a sequencing artifact; PTS system component, authentic frameshift; similar to GP:5669855, GB:L22474, SP:Q07812, SP:Q07814, and PID:388168; identified by sequence similarity 1200724 This region contains an authentic frame shift and is not the result of a sequencing artifact; lipoprotein, , authentic frameshift 1200734 This region contains an authentic frame shift and is not the result of a sequencing artifact; PTS system component, authentic frameshift; similar to SP:P35902; identified by sequence similarity 1200737 This region contains an authentic frame shift and is not the result of a sequencing artifact; IS1485, transposase, authentic frameshift; similar to GP:2605927; identified by sequence similarity 1200738 This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; transposase, truncation; similar to GP:3687662; identified by sequence similarity 1200743 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; transposase, IS256 family, authentic point mutation; similar to GB:X15145, SP:P26998, and PID:1340164; identified by sequence similarity 1200746 This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; transposase, ISL3 family, truncation; similar to GP:8131860; identified by sequence similarity 1200750 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GB:L23309, SP:P01764, SP:P01767, PID:483860, PID:495944, PID:495993, PID:495995, PID:496014, PID:507337, PID:553379, PID:553412, PID:553422, PID:553456, PID:553472, PID:567115, PID:567173, PID:567177, PID:587253, PID:587261, PID:587269, PID:587271, PID:587277, PID:587302, PID:587305, PID:587307, PID:587318, PID:619625, PID:619779, PID:773618, PID:773634, PID:773638, PID:790809, PID:860977, PID:896272, PID:896273, PID:903667, PID:903675, PID:905377, PID:945217, PID:976299, PID:976311, and PID:976323; identified by sequence similarity 1200753 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; conserved hypothetical protein, authentic point mutation; similar to GP:8100672, and GP:8100672; identified by sequence similarity 1200771 This region contains an authentic frame shift and is not the result of a sequencing artifact; group II intron, maturase, , authentic frameshift; similar to GP:5360569; identified by sequence similarity 1200831 This region contains an authentic frame shift and is not the result of a sequencing artifact; PTS system component, authentic frameshift; similar to GP:5669855; identified by sequence similarity 1200859 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; conserved hypothetical protein, authentic point mutation; similar to GP:16414104, GB:M94151, SP:P26232, PID:179924, and PID:179925; identified by sequence similarity 1200873 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein; similar to GP:6599351, and PIR:PC1127; identified by sequence similarity 1200874 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; conserved hypothetical protein, degenerate; identified by match to PFAM protein family HMM PF04239 1200875 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved domain protein, authentic frameshift; similar to GP:13346864; identified by sequence similarity 1200884 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; membrane protein, degenerate 1200902 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GP:7248467, and GP:7248467; identified by sequence similarity 1200905 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GP:8918766, and GP:8918766; identified by sequence similarity 1201031 This region contains an authentic frame shift and is not the result of a sequencing artifact; phosphoglucomutase/phosphomannomutase, authentic frameshift; similar to SP:P29576, and SP:P29575; identified by sequence similarity 1201080 This region contains an authentic frame shift and is not the result of a sequencing artifact; aminopeptidase pep, authentic frameshift; similar to SP:Q9X4A7, SP:Q9X4A7, SP:Q9X4A7, and SP:Q9X4A7; identified by sequence similarity 1201194 This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; modification methylase MUNI , truncation; similar to GP:8100661, and SP:P43641; identified by sequence similarity 1201228 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; transposase, IS3 family, degenerate; similar to GP:2467226; identified by sequence similarity 1201270 This region contains an authentic frame shift and is not the result of a sequencing artifact; pheromone cPD1 lipoprotein; similar to GP:6117974; identified by sequence similarity 1201373 This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; identified by Glimmer2 1201526 This region contains a pseudogene, one or more premature stops, and is not the result of a sequencing artifact; ribosomal large subunit pseudouridine synthase, RluD subfamily; similar to GP:10175468; identified by sequence similarity 1201542 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; internalin protein family, authentic point mutation; similar to SP:P25146, and PIR:S37387; identified by sequence similarity 1201622 This region contains an authentic frame shift and is not the result of a sequencing artifact; drug resistance transporter , authentic frameshift; similar to GP:6448595; identified by sequence similarity 1201658 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; conserved hypothetical protein, degenerate; identified by Glimmer2 1201717 This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; conserved hypothetical protein, truncation; similar to GB:U11814, GB:M80634, SP:P21802, SP:Q01742, PID:1129107, PID:182567, PID:186741, PID:29432, and PID:530802; identified by sequence similarity 1201968 This region contains an authentic frame shift and is not the result of a sequencing artifact; polypeptide deformylase, authentic frameshift; similar to SP:P06519, PID:455334, and PID:1145786; identified by sequence similarity 1202064 This region contains an authentic point mutation, causing a premature stop, and is not the result of a sequencing artifact; conserved domain protein, authentic point mutation; similar to GP:23094638; identified by sequence similarity 1202066 This region contains an authentic frame shift and is not the result of a sequencing artifact; ribosomal protein L13, authentic frameshift; similar to GB:L12168, SP:Q01518, PID:178084, PID:179920, GB:L12168, SP:Q01518, PID:178084, and PID:179920; identified by sequence similarity 1202184 This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; plasmid copy control protein, truncation; similar to GB:X15653, SP:P13051, PID:1296803, and PID:37599; identified by sequence similarity; putative 1202194 This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; conserved hypothetical protein, truncation; similar to GP:18104277, and SP:Q925W4; identified by sequence similarity; putative 1202253 This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; conserved hypothetical protein, degenerate; identified by Glimmer2; putative