-- dump date 20140619_082942 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_006162342.1 386698505 12760423 190..255 1 NC_017660.1 thr operon leader peptide 255 thrL 12760423 thrL Escherichia coli KO11FL thr operon leader peptide YP_006162342.1 190 D 595495 CDS YP_006162343.1 386698506 12760425 336..2798 1 NC_017660.1 COG0527 Aspartokinases; bifunctional aspartokinase I/homoserine dehydrogenase I 2798 thrA 12760425 thrA Escherichia coli KO11FL bifunctional aspartokinase I/homoserine dehydrogenase I YP_006162343.1 336 D 595495 CDS YP_006162344.1 386698507 12760535 2800..3732 1 NC_017660.1 COG0083 Homoserine kinase; homoserine kinase 3732 thrB 12760535 thrB Escherichia coli KO11FL homoserine kinase YP_006162344.1 2800 D 595495 CDS YP_006162345.1 386698508 12760792 3733..5019 1 NC_017660.1 COG0498 Threonine synthase; threonine synthase 5019 thrC 12760792 thrC Escherichia coli KO11FL threonine synthase YP_006162345.1 3733 D 595495 CDS YP_006162346.1 386698509 12761493 5233..5529 1 NC_017660.1 yaaX; hypothetical protein 5529 12761493 KO11_00025 Escherichia coli KO11FL hypothetical protein YP_006162346.1 5233 D 595495 CDS YP_006162347.1 386698510 12761495 5789..6769 1 NC_017660.1 COG3547 Transposase and inactivated derivatives; putative IS621 transposase 6769 12761495 KO11_00030 Escherichia coli KO11FL putative IS621 transposase YP_006162347.1 5789 D 595495 CDS YP_006162348.1 386698511 12761602 complement(6961..7737) 1 NC_017660.1 COG3022 Uncharacterized protein conserved in bacteria; yaaA; hypothetical protein 7737 12761602 KO11_00035 Escherichia coli KO11FL hypothetical protein YP_006162348.1 6961 R 595495 CDS YP_006162349.1 386698512 12761702 complement(7807..9237) 1 NC_017660.1 COG1115 Na+/alanine symporter; putative transporter 9237 yaaJ 12761702 yaaJ Escherichia coli KO11FL putative transporter YP_006162349.1 7807 R 595495 CDS YP_006162350.1 386698513 12761704 9516..10469 1 NC_017660.1 COG0176 Transaldolase; transaldolase B 10469 talB 12761704 talB Escherichia coli KO11FL transaldolase B YP_006162350.1 9516 D 595495 CDS YP_006162351.1 386698514 12763028 10584..11171 1 NC_017660.1 COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA 11171 mogA 12763028 mogA Escherichia coli KO11FL molybdenum cofactor biosynthesis protein MogA YP_006162351.1 10584 D 595495 CDS YP_006162352.1 386698515 12763029 complement(11206..11772) 1 NC_017660.1 COG1584 Predicted membrane protein; yaaH; hypothetical protein 11772 12763029 KO11_00055 Escherichia coli KO11FL hypothetical protein YP_006162352.1 11206 R 595495 CDS YP_006162353.1 386698516 12763030 complement(11921..12634) 1 NC_017660.1 COG4735 Uncharacterized protein conserved in bacteria; yaaW; hypothetical protein 12634 12763030 KO11_00060 Escherichia coli KO11FL hypothetical protein YP_006162353.1 11921 R 595495 CDS YP_006162354.1 386698517 12763031 complement(12660..13064) 1 NC_017660.1 yaaI; hypothetical protein 13064 12763031 KO11_00065 Escherichia coli KO11FL hypothetical protein YP_006162354.1 12660 R 595495 CDS YP_006162355.1 386698518 12763032 13441..15357 1 NC_017660.1 COG0443 Molecular chaperone; molecular chaperone DnaK 15357 dnaK 12763032 dnaK Escherichia coli KO11FL molecular chaperone DnaK YP_006162355.1 13441 D 595495 CDS YP_006162356.1 386698519 12763033 15446..16576 1 NC_017660.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ 16576 dnaJ 12763033 dnaJ Escherichia coli KO11FL chaperone protein DnaJ YP_006162356.1 15446 D 595495 CDS YP_006162357.1 386698520 12763034 complement(16680..16889) 1 NC_017660.1 regulatory protein MokC for HokC 16889 mokC 12763034 mokC Escherichia coli KO11FL regulatory protein MokC for HokC YP_006162357.1 16680 R 595495 CDS YP_006162358.1 386698521 12763035 complement(16680..16832) 1 NC_017660.1 toxic membrane protein, small 16832 hokC 12763035 hokC Escherichia coli KO11FL toxic membrane protein, small YP_006162358.1 16680 R 595495 CDS YP_006162359.1 386698522 12763036 17418..18584 1 NC_017660.1 COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter 18584 nhaA 12763036 nhaA Escherichia coli KO11FL pH-dependent sodium/proton antiporter YP_006162359.1 17418 D 595495 CDS YP_006162360.1 386698523 12763037 18650..19549 1 NC_017660.1 COG0583 Transcriptional regulator; transcriptional activator NhaR 19549 nhaR 12763037 nhaR Escherichia coli KO11FL transcriptional activator NhaR YP_006162360.1 18650 D 595495 CDS YP_006162361.1 386698524 12763038 complement(19588..20547) 1 NC_017660.1 hypothetical protein 20547 12763038 KO11_00095 Escherichia coli KO11FL hypothetical protein YP_006162361.1 19588 R 595495 CDS YP_006162362.1 386698525 12763039 complement(20560..21705) 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; yehB-2; hypothetical protein 21705 12763039 KO11_00100 Escherichia coli KO11FL hypothetical protein YP_006162362.1 20560 R 595495 CDS YP_006162363.1 386698526 12763040 complement(24043..24306) 1 NC_017660.1 COG0268 Ribosomal protein S20; 30S ribosomal protein S20 24306 rpsT 12763040 rpsT Escherichia coli KO11FL 30S ribosomal protein S20 YP_006162363.1 24043 R 595495 CDS YP_006162364.1 386698527 12763041 24409..24627 1 NC_017660.1 yaaY; hypothetical protein 24627 12763041 KO11_00120 Escherichia coli KO11FL hypothetical protein YP_006162364.1 24409 D 595495 CDS YP_006162365.1 386698528 12763042 24635..25576 1 NC_017660.1 COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase 25576 ribF 12763042 ribF Escherichia coli KO11FL bifunctional riboflavin kinase/FMN adenylyltransferase YP_006162365.1 24635 D 595495 CDS YP_006162366.1 386698529 12763043 25619..28435 1 NC_017660.1 COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 28435 ileS 12763043 ileS Escherichia coli KO11FL isoleucyl-tRNA synthetase YP_006162366.1 25619 D 595495 CDS YP_006162367.1 386698530 12763044 28435..28929 1 NC_017660.1 COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase 28929 lspA 12763044 lspA Escherichia coli KO11FL lipoprotein signal peptidase YP_006162367.1 28435 D 595495 CDS YP_006162368.1 386698531 12763045 29017..29466 1 NC_017660.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase 29466 fkbp 12763045 fkbp Escherichia coli KO11FL FKBP-type peptidyl-prolyl cis-trans isomerase YP_006162368.1 29017 D 595495 CDS YP_006162369.1 386698532 12763046 29468..30418 1 NC_017660.1 COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 30418 ispH 12763046 ispH Escherichia coli KO11FL 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_006162369.1 29468 D 595495 CDS YP_006162370.1 386698533 12763047 30484..31398 1 NC_017660.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase; ribonucleoside hydrolase RihC 31398 rihC 12763047 rihC Escherichia coli KO11FL ribonucleoside hydrolase RihC YP_006162370.1 30484 D 595495 CDS YP_006162371.1 386698534 12763048 31565..32386 1 NC_017660.1 COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 32386 dapB 12763048 dapB Escherichia coli KO11FL dihydrodipicolinate reductase YP_006162371.1 31565 D 595495 CDS YP_006162372.1 386698535 12763049 32842..33990 1 NC_017660.1 COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit 33990 carA 12763049 carA Escherichia coli KO11FL carbamoyl phosphate synthase small subunit YP_006162372.1 32842 D 595495 CDS YP_006162373.1 386698536 12763050 34008..37229 1 NC_017660.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit 37229 carB 12763050 carB Escherichia coli KO11FL carbamoyl phosphate synthase large subunit YP_006162373.1 34008 D 595495 CDS YP_006162374.1 386698537 12763051 37490..37885 1 NC_017660.1 DNA-binding transcriptional activator CaiF 37885 caiF 12763051 caiF Escherichia coli KO11FL DNA-binding transcriptional activator CaiF YP_006162374.1 37490 D 595495 CDS YP_006162375.1 386698538 12763052 complement(37971..38561) 1 NC_017660.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; carnitine operon protein CaiE 38561 caiE 12763052 caiE Escherichia coli KO11FL carnitine operon protein CaiE YP_006162375.1 37971 R 595495 CDS YP_006162376.1 386698539 12763053 complement(38567..39352) 1 NC_017660.1 COG1024 Enoyl-CoA hydratase/carnithine racemase; carnitinyl-CoA dehydratase 39352 caiD 12763053 caiD Escherichia coli KO11FL carnitinyl-CoA dehydratase YP_006162376.1 38567 R 595495 CDS YP_006162377.1 386698540 12763054 complement(39461..41014) 1 NC_017660.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; putative crotonobetaine/carnitine-CoA ligase 41014 caiC 12763054 caiC Escherichia coli KO11FL putative crotonobetaine/carnitine-CoA ligase YP_006162377.1 39461 R 595495 CDS YP_006162378.1 386698541 12763055 complement(41088..42305) 1 NC_017660.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; crotonobetainyl-CoA:carnitine CoA-transferase 42305 caiB 12763055 caiB Escherichia coli KO11FL crotonobetainyl-CoA:carnitine CoA-transferase YP_006162378.1 41088 R 595495 CDS YP_006162379.1 386698542 12763056 complement(42434..43576) 1 NC_017660.1 COG1960 Acyl-CoA dehydrogenases; crotonobetainyl-CoA dehydrogenase 43576 caiA 12763056 caiA Escherichia coli KO11FL crotonobetainyl-CoA dehydrogenase YP_006162379.1 42434 R 595495 CDS YP_006162380.1 386698543 12763057 complement(43607..45121) 1 NC_017660.1 COG1292 Choline-glycine betaine transporter; L-carnitine/gamma-butyrobetaine antiporter 45121 caiT 12763057 caiT Escherichia coli KO11FL L-carnitine/gamma-butyrobetaine antiporter YP_006162380.1 43607 R 595495 CDS YP_006162381.1 386698544 12763058 45595..46365 1 NC_017660.1 COG2086 Electron transfer flavoprotein, beta subunit; putative electron transfer flavoprotein FixA 46365 fixA 12763058 fixA Escherichia coli KO11FL putative electron transfer flavoprotein FixA YP_006162381.1 45595 D 595495 CDS YP_006162382.1 386698545 12763059 46380..47321 1 NC_017660.1 COG2025 Electron transfer flavoprotein, alpha subunit; putative electron transfer flavoprotein FixB 47321 fixB 12763059 fixB Escherichia coli KO11FL putative electron transfer flavoprotein FixB YP_006162382.1 46380 D 595495 CDS YP_006162383.1 386698546 12759543 47372..48658 1 NC_017660.1 COG0644 Dehydrogenases (flavoproteins); putative oxidoreductase FixC 48658 fixC 12759543 fixC Escherichia coli KO11FL putative oxidoreductase FixC YP_006162383.1 47372 D 595495 CDS YP_006162384.1 386698547 12759544 48655..48942 1 NC_017660.1 COG2440 Ferredoxin-like protein; ferredoxin-like protein FixX 48942 fixX 12759544 fixX Escherichia coli KO11FL ferredoxin-like protein FixX YP_006162384.1 48655 D 595495 CDS YP_006162385.1 386698548 12759545 49001..50332 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 50332 yaaU 12759545 yaaU Escherichia coli KO11FL putative transporter YP_006162385.1 49001 D 595495 CDS YP_006162386.1 386698549 12759546 50440..50970 1 NC_017660.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); glutathione-regulated potassium-efflux system ancillary protein KefF 50970 kefF 12759546 kefF Escherichia coli KO11FL glutathione-regulated potassium-efflux system ancillary protein KefF YP_006162386.1 50440 D 595495 CDS YP_006162387.1 386698550 12759547 50963..52825 1 NC_017660.1 COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein KefC 52825 kefC 12759547 kefC Escherichia coli KO11FL glutathione-regulated potassium-efflux system protein KefC YP_006162387.1 50963 D 595495 CDS YP_006162388.1 386698551 12759548 53017..53496 1 NC_017660.1 COG0262 Dihydrofolate reductase; dihydrofolate reductase 53496 folA 12759548 folA Escherichia coli KO11FL dihydrofolate reductase YP_006162388.1 53017 D 595495 CDS YP_006162389.1 386698552 12759549 complement(53574..54416) 1 NC_017660.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; diadenosine tetraphosphatase 54416 apaH 12759549 apaH Escherichia coli KO11FL diadenosine tetraphosphatase YP_006162389.1 53574 R 595495 CDS YP_006162390.1 386698553 12759550 complement(54423..54800) 1 NC_017660.1 COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; CO2+/MG2+ efflux protein ApaG 54800 apaG 12759550 apaG Escherichia coli KO11FL CO2+/MG2+ efflux protein ApaG YP_006162390.1 54423 R 595495 CDS YP_006162391.1 386698554 12759551 complement(54803..55624) 1 NC_017660.1 COG0030 Dimethyladenosine transferase (rRNA methylation); KsgA/Dim1 family 16S ribosomal RNA methyltransferase 55624 rsmA 12759551 rsmA Escherichia coli KO11FL KsgA/Dim1 family 16S ribosomal RNA methyltransferase YP_006162391.1 54803 R 595495 CDS YP_006162392.1 386698555 12759552 complement(55621..56610) 1 NC_017660.1 COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 56610 pdxA 12759552 pdxA Escherichia coli KO11FL 4-hydroxythreonine-4-phosphate dehydrogenase YP_006162392.1 55621 R 595495 CDS YP_006162393.1 386698556 12759553 complement(56610..57896) 1 NC_017660.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase SurA 57896 surA 12759553 surA Escherichia coli KO11FL peptidyl-prolyl cis-trans isomerase SurA YP_006162393.1 56610 R 595495 CDS YP_006162394.1 386698557 12759554 complement(57949..60303) 1 NC_017660.1 COG1452 Organic solvent tolerance protein OstA; LPS assembly outer membrane complex protein LptD 60303 lptD 12759554 lptD Escherichia coli KO11FL LPS assembly outer membrane complex protein LptD YP_006162394.1 57949 R 595495 CDS YP_006162395.1 386698558 12759555 60558..61373 1 NC_017660.1 COG1076 DnaJ-domain-containing proteins 1; Dna-J like membrane chaperone protein 61373 djlA 12759555 djlA Escherichia coli KO11FL Dna-J like membrane chaperone protein YP_006162395.1 60558 D 595495 CDS YP_006162396.1 386698559 12759556 complement(61490..62149) 1 NC_017660.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA/tRNA pseudouridine synthase A 62149 rluA 12759556 rluA Escherichia coli KO11FL 23S rRNA/tRNA pseudouridine synthase A YP_006162396.1 61490 R 595495 CDS YP_006162397.1 386698560 12759557 complement(62161..65067) 1 NC_017660.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family; ATP-dependent helicase HepA 65067 hepA 12759557 hepA Escherichia coli KO11FL ATP-dependent helicase HepA YP_006162397.1 62161 R 595495 CDS YP_006162398.1 386698561 12759558 complement(65232..67583) 1 NC_017660.1 COG0417 DNA polymerase elongation subunit (family B); DNA polymerase II 67583 polB 12759558 polB Escherichia coli KO11FL DNA polymerase II YP_006162398.1 65232 R 595495 CDS YP_006162399.1 386698562 12759559 complement(67658..68353) 1 NC_017660.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase 68353 araD 12759559 araD Escherichia coli KO11FL L-ribulose-5-phosphate 4-epimerase YP_006162399.1 67658 R 595495 CDS YP_006162400.1 386698563 12759560 complement(68522..70024) 1 NC_017660.1 COG2160 L-arabinose isomerase; L-arabinose isomerase 70024 araA 12759560 araA Escherichia coli KO11FL L-arabinose isomerase YP_006162400.1 68522 R 595495 CDS YP_006162401.1 386698564 12759561 complement(70035..71735) 1 NC_017660.1 COG1069 Ribulose kinase; ribulokinase 71735 araB 12759561 araB Escherichia coli KO11FL ribulokinase YP_006162401.1 70035 R 595495 CDS YP_006162402.1 386698565 12759562 72074..72952 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator AraC 72952 araC 12759562 araC Escherichia coli KO11FL DNA-binding transcriptional regulator AraC YP_006162402.1 72074 D 595495 CDS YP_006162403.1 386698566 12759563 73038..73802 1 NC_017660.1 COG0586 Uncharacterized membrane-associated protein; yabI; hypothetical protein 73802 12759563 KO11_00315 Escherichia coli KO11FL hypothetical protein YP_006162403.1 73038 D 595495 CDS YP_006162404.1 386698567 12759564 complement(73904..74602) 1 NC_017660.1 COG3840 ABC-type thiamine transport system, ATPase component; thiamine transporter ATP-binding subunit 74602 thiQ 12759564 thiQ Escherichia coli KO11FL thiamine transporter ATP-binding subunit YP_006162404.1 73904 R 595495 CDS YP_006162405.1 386698568 12759565 complement(74586..76196) 1 NC_017660.1 COG0555 ABC-type sulfate transport system, permease component; thiamine transporter membrane protein 76196 thiP 12759565 thiP Escherichia coli KO11FL thiamine transporter membrane protein YP_006162405.1 74586 R 595495 CDS YP_006162406.1 386698569 12759566 complement(76172..77155) 1 NC_017660.1 COG4143 ABC-type thiamine transport system, periplasmic component; thiamine transporter substrate binding subunit 77155 tbpA 12759566 tbpA Escherichia coli KO11FL thiamine transporter substrate binding subunit YP_006162406.1 76172 R 595495 CDS YP_006162407.1 386698570 12759567 complement(77319..78974) 1 NC_017660.1 COG4533 ABC-type uncharacterized transport system, periplasmic component; transcriptional regulator SgrR 78974 sgrR 12759567 sgrR Escherichia coli KO11FL transcriptional regulator SgrR YP_006162407.1 77319 R 595495 CDS YP_006162408.1 386698571 12759568 79063..79194 1 NC_017660.1 inhibitor of glucose uptake, regulator of PtsG activity 79194 sgrT 12759568 sgrT Escherichia coli KO11FL inhibitor of glucose uptake, regulator of PtsG activity YP_006162408.1 79063 D 595495 CDS YP_006162409.1 386698572 12759569 79296..80474 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; broad specificity sugar efflux system SetA 80474 setA 12759569 setA Escherichia coli KO11FL broad specificity sugar efflux system SetA YP_006162409.1 79296 D 595495 CDS YP_006162410.1 386698573 12759570 complement(80523..81128) 1 NC_017660.1 COG0066 3-isopropylmalate dehydratase small subunit; isopropylmalate isomerase small subunit 81128 leuD 12759570 leuD Escherichia coli KO11FL isopropylmalate isomerase small subunit YP_006162410.1 80523 R 595495 CDS YP_006162411.1 386698574 12759571 complement(81139..82539) 1 NC_017660.1 COG0065 3-isopropylmalate dehydratase large subunit; isopropylmalate isomerase large subunit 82539 leuC 12759571 leuC Escherichia coli KO11FL isopropylmalate isomerase large subunit YP_006162411.1 81139 R 595495 CDS YP_006162412.1 386698575 12759572 complement(82542..83633) 1 NC_017660.1 COG0473 Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 83633 leuB 12759572 leuB Escherichia coli KO11FL 3-isopropylmalate dehydrogenase YP_006162412.1 82542 R 595495 CDS YP_006162413.1 386698576 12759573 complement(83633..85204) 1 NC_017660.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases; 2-isopropylmalate synthase 85204 leuA 12759573 leuA Escherichia coli KO11FL 2-isopropylmalate synthase YP_006162413.1 83633 R 595495 CDS YP_006162414.1 386698577 12759574 complement(85297..85383) 1 NC_017660.1 leu operon leader peptide 85383 leuL 12759574 leuL Escherichia coli KO11FL leu operon leader peptide YP_006162414.1 85297 R 595495 CDS YP_006162415.1 386698578 12759575 86043..86987 1 NC_017660.1 COG0583 Transcriptional regulator; leucine transcriptional activator 86987 leuO 12759575 leuO Escherichia coli KO11FL leucine transcriptional activator YP_006162415.1 86043 D 595495 CDS YP_006162416.1 386698579 12759576 87329..89029 1 NC_017660.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase 3 catalytic subunit 89029 ilvI 12759576 ilvI Escherichia coli KO11FL acetolactate synthase 3 catalytic subunit YP_006162416.1 87329 D 595495 CDS YP_006162417.1 386698580 12759577 89032..89523 1 NC_017660.1 COG0440 Acetolactate synthase, small (regulatory) subunit; acetolactate synthase 3 regulatory subunit 89523 ilvH 12759577 ilvH Escherichia coli KO11FL acetolactate synthase 3 regulatory subunit YP_006162417.1 89032 D 595495 CDS YP_006162418.1 386698581 12759578 89703..90707 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional regulator FruR 90707 fruR 12759578 fruR Escherichia coli KO11FL DNA-binding transcriptional regulator FruR YP_006162418.1 89703 D 595495 CDS YP_006162419.1 386698582 12759579 91309..91767 1 NC_017660.1 COG2001 Uncharacterized protein conserved in bacteria; cell division protein MraZ 91767 mraZ 12759579 mraZ Escherichia coli KO11FL cell division protein MraZ YP_006162419.1 91309 D 595495 CDS YP_006162420.1 386698583 12759580 91769..92710 1 NC_017660.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltransferase 92710 rsmH 12759580 rsmH Escherichia coli KO11FL 16S rRNA m(4)C1402 methyltransferase YP_006162420.1 91769 D 595495 CDS YP_006162421.1 386698584 12759581 92707..93072 1 NC_017660.1 COG3116 Cell division protein; cell division protein FtsL 93072 ftsL 12759581 ftsL Escherichia coli KO11FL cell division protein FtsL YP_006162421.1 92707 D 595495 CDS YP_006162422.1 386698585 12759582 93088..94854 1 NC_017660.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; peptidoglycan synthase FtsI 94854 ftsI 12759582 ftsI Escherichia coli KO11FL peptidoglycan synthase FtsI YP_006162422.1 93088 D 595495 CDS YP_006162423.1 386698586 12759583 94841..96328 1 NC_017660.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 96328 murE 12759583 murE Escherichia coli KO11FL UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_006162423.1 94841 D 595495 CDS YP_006162424.1 386698587 12759584 96325..97683 1 NC_017660.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 97683 murF 12759584 murF Escherichia coli KO11FL UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_006162424.1 96325 D 595495 CDS YP_006162425.1 386698588 12759585 97677..98759 1 NC_017660.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 98759 mraY 12759585 mraY Escherichia coli KO11FL phospho-N-acetylmuramoyl-pentapeptide- transferase YP_006162425.1 97677 D 595495 CDS YP_006162426.1 386698589 12759586 98762..100078 1 NC_017660.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 100078 murD 12759586 murD Escherichia coli KO11FL UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_006162426.1 98762 D 595495 CDS YP_006162427.1 386698590 12759587 100078..101322 1 NC_017660.1 COG0772 Bacterial cell division membrane protein; cell division protein FtsW 101322 ftsW 12759587 ftsW Escherichia coli KO11FL cell division protein FtsW YP_006162427.1 100078 D 595495 CDS YP_006162428.1 386698591 12759588 101319..102386 1 NC_017660.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 102386 murG 12759588 murG Escherichia coli KO11FL undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_006162428.1 101319 D 595495 CDS YP_006162429.1 386698592 12759589 102440..103915 1 NC_017660.1 COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 103915 murC 12759589 murC Escherichia coli KO11FL UDP-N-acetylmuramate--L-alanine ligase YP_006162429.1 102440 D 595495 CDS YP_006162430.1 386698593 12759590 103908..104828 1 NC_017660.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanine--D-alanine ligase 104828 ddlB 12759590 ddlB Escherichia coli KO11FL D-alanine--D-alanine ligase YP_006162430.1 103908 D 595495 CDS YP_006162431.1 386698594 12759591 104830..105660 1 NC_017660.1 COG1589 Cell division septal protein; cell division protein FtsQ 105660 ftsQ 12759591 ftsQ Escherichia coli KO11FL cell division protein FtsQ YP_006162431.1 104830 D 595495 CDS YP_006162432.1 386698595 12759592 105657..106919 1 NC_017660.1 COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 106919 ftsA 12759592 ftsA Escherichia coli KO11FL cell division protein FtsA YP_006162432.1 105657 D 595495 CDS YP_006162433.1 386698596 12759593 106980..108131 1 NC_017660.1 COG0206 Cell division GTPase; cell division protein FtsZ 108131 ftsZ 12759593 ftsZ Escherichia coli KO11FL cell division protein FtsZ YP_006162433.1 106980 D 595495 CDS YP_006162434.1 386698597 12759594 108232..109149 1 NC_017660.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 109149 lpxC 12759594 lpxC Escherichia coli KO11FL UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_006162434.1 108232 D 595495 CDS YP_006162435.1 386698598 12759595 109380..109892 1 NC_017660.1 SecA regulator SecM 109892 secM 12759595 secM Escherichia coli KO11FL SecA regulator SecM YP_006162435.1 109380 D 595495 CDS YP_006162436.1 386698599 12759596 109954..112659 1 NC_017660.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 112659 secA 12759596 secA Escherichia coli KO11FL preprotein translocase subunit SecA YP_006162436.1 109954 D 595495 CDS YP_006162437.1 386698600 12759597 112719..113108 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; nucleoside triphosphate pyrophosphohydrolase 113108 mutT 12759597 mutT Escherichia coli KO11FL nucleoside triphosphate pyrophosphohydrolase YP_006162437.1 112719 D 595495 CDS YP_006162438.1 386698601 12759598 complement(113208..113405) 1 NC_017660.1 COG3024 Uncharacterized protein conserved in bacteria; DNA gyrase inhibitor 113405 yacG 12759598 yacG Escherichia coli KO11FL DNA gyrase inhibitor YP_006162438.1 113208 R 595495 CDS YP_006162439.1 386698602 12759599 complement(113415..114158) 1 NC_017660.1 COG4582 Uncharacterized protein conserved in bacteria; yacF; hypothetical protein 114158 12759599 KO11_00490 Escherichia coli KO11FL hypothetical protein YP_006162439.1 113415 R 595495 CDS YP_006162440.1 386698603 12759600 complement(114158..114778) 1 NC_017660.1 COG0237 Dephospho-CoA kinase; dephospho-CoA kinase 114778 coaE 12759600 coaE Escherichia coli KO11FL dephospho-CoA kinase YP_006162440.1 114158 R 595495 CDS YP_006162441.1 386698604 12759601 115003..116046 1 NC_017660.1 COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 116046 guaC 12759601 guaC Escherichia coli KO11FL guanosine 5'-monophosphate oxidoreductase YP_006162441.1 115003 D 595495 CDS YP_006162442.1 386698605 12759602 complement(116081..117283) 1 NC_017660.1 COG1459 Type II secretory pathway, component PulF; type IV pilin biogenesis protein 117283 hofC 12759602 hofC Escherichia coli KO11FL type IV pilin biogenesis protein YP_006162442.1 116081 R 595495 CDS YP_006162443.1 386698606 12759603 complement(117273..118658) 1 NC_017660.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; hofB; hypothetical protein 118658 12759603 KO11_00510 Escherichia coli KO11FL hypothetical protein YP_006162443.1 117273 R 595495 CDS YP_006162444.1 386698607 12759604 complement(118668..119108) 1 NC_017660.1 COG4969 Tfp pilus assembly protein, major pilin PilA; putative major pilin subunit 119108 ppdD 12759604 ppdD Escherichia coli KO11FL putative major pilin subunit YP_006162444.1 118668 R 595495 CDS YP_006162445.1 386698608 12759605 complement(119311..120204) 1 NC_017660.1 COG0157 Nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase 120204 nadC 12759605 nadC Escherichia coli KO11FL quinolinate phosphoribosyltransferase YP_006162445.1 119311 R 595495 CDS YP_006162446.1 386698609 12759606 120292..120843 1 NC_017660.1 COG3023 Negative regulator of beta-lactamase expression; N-acetyl-anhydromuranmyl-L-alanine amidase 120843 ampD 12759606 ampD Escherichia coli KO11FL N-acetyl-anhydromuranmyl-L-alanine amidase YP_006162446.1 120292 D 595495 CDS YP_006162447.1 386698610 12759607 120840..121694 1 NC_017660.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB; regulatory protein AmpE 121694 ampE 12759607 ampE Escherichia coli KO11FL regulatory protein AmpE YP_006162447.1 120840 D 595495 CDS YP_006162448.1 386698611 12759608 complement(121737..123107) 1 NC_017660.1 COG1113 Gamma-aminobutyrate permease and related permeases; aromatic amino acid transporter 123107 aroP 12759608 aroP Escherichia coli KO11FL aromatic amino acid transporter YP_006162448.1 121737 R 595495 CDS YP_006162449.1 386698612 12759609 123651..124415 1 NC_017660.1 COG2186 Transcriptional regulators; transcriptional regulator PdhR 124415 pdhR 12759609 pdhR Escherichia coli KO11FL transcriptional regulator PdhR YP_006162449.1 123651 D 595495 CDS YP_006162450.1 386698613 12759610 124576..127239 1 NC_017660.1 COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component; pyruvate dehydrogenase subunit E1 127239 aceE 12759610 aceE Escherichia coli KO11FL pyruvate dehydrogenase subunit E1 YP_006162450.1 124576 D 595495 CDS YP_006162451.1 386698614 12759611 127254..129146 1 NC_017660.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; pyruvate dehydrogenase dihydrolipoyltransacetylase 129146 aceF 12759611 aceF Escherichia coli KO11FL pyruvate dehydrogenase dihydrolipoyltransacetylase YP_006162451.1 127254 D 595495 CDS YP_006162452.1 386698615 12759612 129471..130895 1 NC_017660.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase 130895 lpd 12759612 lpd Escherichia coli KO11FL dihydrolipoamide dehydrogenase YP_006162452.1 129471 D 595495 CDS YP_006162453.1 386698616 12759613 complement(130966..132723) 1 NC_017660.1 yacH; hypothetical protein 132723 12759613 KO11_00560 Escherichia coli KO11FL hypothetical protein YP_006162453.1 130966 R 595495 CDS YP_006162454.1 386698617 12759614 133078..135675 1 NC_017660.1 COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 135675 acnB 12759614 acnB Escherichia coli KO11FL bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_006162454.1 133078 D 595495 CDS YP_006162455.1 386698618 12759615 135851..136213 1 NC_017660.1 COG3112 Uncharacterized protein conserved in bacteria; yacL; hypothetical protein 136213 12759615 KO11_00570 Escherichia coli KO11FL hypothetical protein YP_006162455.1 135851 D 595495 CDS YP_006162456.1 386698619 12759616 complement(136251..137045) 1 NC_017660.1 COG1586 S-adenosylmethionine decarboxylase; S-adenosylmethionine decarboxylase 137045 speD 12759616 speD Escherichia coli KO11FL S-adenosylmethionine decarboxylase YP_006162456.1 136251 R 595495 CDS YP_006162457.1 386698620 12759617 complement(137061..137927) 1 NC_017660.1 COG0421 Spermidine synthase; spermidine synthase 137927 speE 12759617 speE Escherichia coli KO11FL spermidine synthase YP_006162457.1 137061 R 595495 CDS YP_006162458.1 386698621 12759618 complement(138033..138380) 1 NC_017660.1 yacC; hypothetical protein 138380 12759618 KO11_00585 Escherichia coli KO11FL hypothetical protein YP_006162458.1 138033 R 595495 CDS YP_006162459.1 386698622 12759619 138546..140096 1 NC_017660.1 COG2132 Putative multicopper oxidases; multicopper oxidase 140096 cueO 12759619 cueO Escherichia coli KO11FL multicopper oxidase YP_006162459.1 138546 D 595495 CDS YP_006162460.1 386698623 12759620 complement(140143..142533) 1 NC_017660.1 COG4993 Glucose dehydrogenase; glucose dehydrogenase 142533 gcd 12759620 gcd Escherichia coli KO11FL glucose dehydrogenase YP_006162460.1 140143 R 595495 CDS YP_006162461.1 386698624 12759621 142739..143275 1 NC_017660.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 143275 hpt 12759621 hpt Escherichia coli KO11FL hypoxanthine phosphoribosyltransferase YP_006162461.1 142739 D 595495 CDS YP_006162462.1 386698625 12759622 complement(143316..143978) 1 NC_017660.1 COG0288 Carbonic anhydrase; carbonic anhydrase 143978 can 12759622 can Escherichia coli KO11FL carbonic anhydrase YP_006162462.1 143316 R 595495 CDS YP_006162463.1 386698626 12759623 144087..145013 1 NC_017660.1 COG1131 ABC-type multidrug transport system, ATPase component; putative transporter subunit 145013 yadG 12759623 yadG Escherichia coli KO11FL putative transporter subunit YP_006162463.1 144087 D 595495 CDS YP_006162464.1 386698627 12759624 145010..145780 1 NC_017660.1 COG0842 ABC-type multidrug transport system, permease component; inner membrane transport permease 145780 yadH 12759624 yadH Escherichia coli KO11FL inner membrane transport permease YP_006162464.1 145010 D 595495 CDS YP_006162465.1 386698628 12759625 145885..146325 1 NC_017660.1 COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; putative PTS Enzyme IIA 146325 yadI 12759625 yadI Escherichia coli KO11FL putative PTS Enzyme IIA YP_006162465.1 145885 D 595495 CDS YP_006162466.1 386698629 12759626 146389..147618 1 NC_017660.1 COG0726 Predicted xylanase/chitin deacetylase; polysaccharide deacetylase 147618 yadE 12759626 yadE Escherichia coli KO11FL polysaccharide deacetylase YP_006162466.1 146389 D 595495 CDS YP_006162467.1 386698630 12759627 complement(147622..148002) 1 NC_017660.1 COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase 148002 panD 12759627 panD Escherichia coli KO11FL aspartate alpha-decarboxylase YP_006162467.1 147622 R 595495 CDS YP_006162468.1 386698631 12759628 148276..149178 1 NC_017660.1 putative transposase 149178 yadD 12759628 yadD Escherichia coli KO11FL putative transposase YP_006162468.1 148276 D 595495 CDS YP_006162469.1 386698632 12759629 complement(149252..150103) 1 NC_017660.1 COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 150103 panC 12759629 panC Escherichia coli KO11FL pantoate--beta-alanine ligase YP_006162469.1 149252 R 595495 CDS YP_006162470.1 386698633 12759630 complement(150115..150909) 1 NC_017660.1 COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 150909 panB 12759630 panB Escherichia coli KO11FL 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_006162470.1 150115 R 595495 CDS YP_006162471.1 386698634 12759631 complement(151022..152296) 1 NC_017660.1 putative fimbrial-like adhesin protein 152296 yadC 12759631 yadC Escherichia coli KO11FL putative fimbrial-like adhesin protein YP_006162471.1 151022 R 595495 CDS YP_006162472.1 386698635 12759632 complement(152349..152945) 1 NC_017660.1 putative fimbrial protein StaF 152945 yadK 12759632 yadK Escherichia coli KO11FL putative fimbrial protein StaF YP_006162472.1 152349 R 595495 CDS YP_006162473.1 386698636 12759633 complement(152972..153574) 1 NC_017660.1 putative fimbrial protein StaE 153574 yadL 12759633 yadL Escherichia coli KO11FL putative fimbrial protein StaE YP_006162473.1 152972 R 595495 CDS YP_006162474.1 386698637 12759634 complement(153589..154158) 1 NC_017660.1 putative fimbrial protein 154158 yadM 12759634 yadM Escherichia coli KO11FL putative fimbrial protein YP_006162474.1 153589 R 595495 CDS YP_006162475.1 386698638 12759635 complement(154175..156775) 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; putative fimbrial outer membrane usher protein 156775 htrE 12759635 htrE Escherichia coli KO11FL putative fimbrial outer membrane usher protein YP_006162475.1 154175 R 595495 CDS YP_006162476.1 386698639 12759636 complement(156810..157550) 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; putative chaperone protein EcpD 157550 ecpD 12759636 ecpD Escherichia coli KO11FL putative chaperone protein EcpD YP_006162476.1 156810 R 595495 CDS YP_006162477.1 386698640 12759637 complement(157655..158239) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like protein 158239 yadN 12759637 yadN Escherichia coli KO11FL putative fimbrial-like protein YP_006162477.1 157655 R 595495 CDS YP_006162478.1 386698641 12759638 complement(158609..159088) 1 NC_017660.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 159088 folK 12759638 folK Escherichia coli KO11FL 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_006162478.1 158609 R 595495 CDS YP_006162479.1 386698642 12759639 complement(159085..160449) 1 NC_017660.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; poly(A) polymerase I 160449 pcnB 12759639 pcnB Escherichia coli KO11FL poly(A) polymerase I YP_006162479.1 159085 R 595495 CDS YP_006162480.1 386698643 12759640 complement(160542..161468) 1 NC_017660.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-Q tRNA(Asp) synthetase 161468 yadB 12759640 yadB Escherichia coli KO11FL glutamyl-Q tRNA(Asp) synthetase YP_006162480.1 160542 R 595495 CDS YP_006162481.1 386698644 12759641 complement(161505..161960) 1 NC_017660.1 COG1734 DnaK suppressor protein; RNA polymerase-binding transcription factor 161960 dksA 12759641 dksA Escherichia coli KO11FL RNA polymerase-binding transcription factor YP_006162481.1 161505 R 595495 CDS YP_006162482.1 386698645 12759642 complement(162138..162842) 1 NC_017660.1 COG1489 DNA-binding protein, stimulates sugar fermentation; putative DNA-binding transcriptional regulator 162842 sfsA 12759642 sfsA Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006162482.1 162138 R 595495 CDS YP_006162483.1 386698646 12759643 complement(162857..163387) 1 NC_017660.1 COG1514 2-5 RNA ligase; 2'-5' RNA ligase 163387 ligT 12759643 ligT Escherichia coli KO11FL 2'-5' RNA ligase YP_006162483.1 162857 R 595495 CDS YP_006162484.1 386698647 12759644 163461..165890 1 NC_017660.1 COG1643 HrpA-like helicases; ATP-dependent RNA helicase HrpB 165890 hrpB 12759644 hrpB Escherichia coli KO11FL ATP-dependent RNA helicase HrpB YP_006162484.1 163461 D 595495 CDS YP_006162485.1 386698648 12759645 165929..166099 1 NC_017660.1 hypothetical protein 166099 12759645 KO11_00720 Escherichia coli KO11FL hypothetical protein YP_006162485.1 165929 D 595495 CDS YP_006162486.1 386698649 12759646 166086..168620 1 NC_017660.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein); bifunctional glycosyl transferase/transpeptidase 168620 mrcB 12759646 mrcB Escherichia coli KO11FL bifunctional glycosyl transferase/transpeptidase YP_006162486.1 166086 D 595495 CDS YP_006162487.1 386698650 12759647 168840..171083 1 NC_017660.1 COG1629 Outer membrane receptor proteins, mostly Fe transport; ferrichrome outer membrane transporter 171083 fhuA 12759647 fhuA Escherichia coli KO11FL ferrichrome outer membrane transporter YP_006162487.1 168840 D 595495 CDS YP_006162488.1 386698651 12759648 171134..171931 1 NC_017660.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron-hydroxamate transporter ATP-binding subunit 171931 fhuC 12759648 fhuC Escherichia coli KO11FL iron-hydroxamate transporter ATP-binding subunit YP_006162488.1 171134 D 595495 CDS YP_006162489.1 386698652 12759649 171931..172821 1 NC_017660.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron-hydroxamate transporter substrate-binding subunit 172821 fhuD 12759649 fhuD Escherichia coli KO11FL iron-hydroxamate transporter substrate-binding subunit YP_006162489.1 171931 D 595495 CDS YP_006162490.1 386698653 12759650 172818..174800 1 NC_017660.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron-hydroxamate transporter permease subunit 174800 fhuB 12759650 fhuB Escherichia coli KO11FL iron-hydroxamate transporter permease subunit YP_006162490.1 172818 D 595495 CDS YP_006162491.1 386698654 12759651 complement(174835..176115) 1 NC_017660.1 COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 176115 hemL 12759651 hemL Escherichia coli KO11FL glutamate-1-semialdehyde aminotransferase YP_006162491.1 174835 R 595495 CDS YP_006162492.1 386698655 12759652 176340..177761 1 NC_017660.1 COG0038 Chloride channel protein EriC; chloride channel protein 177761 clcA 12759652 clcA Escherichia coli KO11FL chloride channel protein YP_006162492.1 176340 D 595495 CDS YP_006162493.1 386698656 12759653 177843..178187 1 NC_017660.1 COG0316 Uncharacterized conserved protein; iron-sulfur cluster insertion protein ErpA 178187 erpA 12759653 erpA Escherichia coli KO11FL iron-sulfur cluster insertion protein ErpA YP_006162493.1 177843 D 595495 CDS YP_006162494.1 386698657 12759654 complement(178234..178857) 1 NC_017660.1 COG2860 Predicted membrane protein; yadS; hypothetical protein 178857 12759654 KO11_00765 Escherichia coli KO11FL hypothetical protein YP_006162494.1 178234 R 595495 CDS YP_006162495.1 386698658 12759655 complement(178895..179695) 1 NC_017660.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; vitamin B12-transporter protein BtuF 179695 btuF 12759655 btuF Escherichia coli KO11FL vitamin B12-transporter protein BtuF YP_006162495.1 178895 R 595495 CDS YP_006162496.1 386698659 12759656 complement(179688..180386) 1 NC_017660.1 COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 180386 mtn 12759656 mtn Escherichia coli KO11FL 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_006162496.1 179688 R 595495 CDS YP_006162497.1 386698660 12759657 180470..181987 1 NC_017660.1 COG0232 dGTP triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase 181987 dgt 12759657 dgt Escherichia coli KO11FL deoxyguanosinetriphosphate triphosphohydrolase YP_006162497.1 180470 D 595495 CDS YP_006162498.1 386698661 12759658 182117..183541 1 NC_017660.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease 183541 degP 12759658 degP Escherichia coli KO11FL serine endoprotease YP_006162498.1 182117 D 595495 CDS YP_006162499.1 386698662 12759659 183696..184853 1 NC_017660.1 COG3835 Sugar diacid utilization regulator; carbohydrate diacid transcriptional activator CdaR 184853 cdaR 12759659 cdaR Escherichia coli KO11FL carbohydrate diacid transcriptional activator CdaR YP_006162499.1 183696 D 595495 CDS YP_006162500.1 386698663 12759660 complement(184942..185328) 1 NC_017660.1 yaeH; hypothetical protein 185328 12759660 KO11_00795 Escherichia coli KO11FL hypothetical protein YP_006162500.1 184942 R 595495 CDS YP_006162501.1 386698664 12759661 complement(185640..186464) 1 NC_017660.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 186464 dapD 12759661 dapD Escherichia coli KO11FL 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_006162501.1 185640 R 595495 CDS YP_006162502.1 386698665 12759662 complement(186495..189167) 1 NC_017660.1 COG2844 UTP:GlnB (protein PII) uridylyltransferase; PII uridylyl-transferase 189167 glnD 12759662 glnD Escherichia coli KO11FL PII uridylyl-transferase YP_006162502.1 186495 R 595495 CDS YP_006162503.1 386698666 12759663 complement(189229..190023) 1 NC_017660.1 COG0024 Methionine aminopeptidase; methionine aminopeptidase 190023 map 12759663 map Escherichia coli KO11FL methionine aminopeptidase YP_006162503.1 189229 R 595495 CDS YP_006162504.1 386698667 12759664 190391..191116 1 NC_017660.1 COG0052 Ribosomal protein S2; 30S ribosomal protein S2 191116 rpsB 12759664 rpsB Escherichia coli KO11FL 30S ribosomal protein S2 YP_006162504.1 190391 D 595495 CDS YP_006162505.1 386698668 12759665 191374..192225 1 NC_017660.1 COG0264 Translation elongation factor Ts; elongation factor Ts 192225 tsf 12759665 tsf Escherichia coli KO11FL elongation factor Ts YP_006162505.1 191374 D 595495 CDS YP_006162506.1 386698669 12759666 192372..193097 1 NC_017660.1 COG0528 Uridylate kinase; uridylate kinase 193097 pyrH 12759666 pyrH Escherichia coli KO11FL uridylate kinase YP_006162506.1 192372 D 595495 CDS YP_006162507.1 386698670 12759667 193389..193946 1 NC_017660.1 COG0233 Ribosome recycling factor; ribosome recycling factor 193946 frr 12759667 frr Escherichia coli KO11FL ribosome recycling factor YP_006162507.1 193389 D 595495 CDS YP_006162508.1 386698671 12759668 194038..195234 1 NC_017660.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 195234 dxr 12759668 dxr Escherichia coli KO11FL 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006162508.1 194038 D 595495 CDS YP_006162509.1 386698672 12759669 195423..196181 1 NC_017660.1 COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase 196181 ispU 12759669 ispU Escherichia coli KO11FL undecaprenyl pyrophosphate synthase YP_006162509.1 195423 D 595495 CDS YP_006162510.1 386698673 12759670 196194..197051 1 NC_017660.1 COG0575 CDP-diglyceride synthetase; CDP-diglyceride synthase 197051 cdsA 12759670 cdsA Escherichia coli KO11FL CDP-diglyceride synthase YP_006162510.1 196194 D 595495 CDS YP_006162511.1 386698674 12759671 197063..198415 1 NC_017660.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1; zinc metallopeptidase RseP 198415 rseP 12759671 rseP Escherichia coli KO11FL zinc metallopeptidase RseP YP_006162511.1 197063 D 595495 CDS YP_006162512.1 386698675 12759672 198445..200877 1 NC_017660.1 COG4775 Outer membrane protein/protective antigen OMA87; outer membrane protein assembly factor YaeT 200877 bamA 12759672 bamA Escherichia coli KO11FL outer membrane protein assembly factor YaeT YP_006162512.1 198445 D 595495 CDS YP_006162513.1 386698676 12759673 200999..201484 1 NC_017660.1 COG2825 Outer membrane protein; periplasmic chaperone 201484 skp 12759673 skp Escherichia coli KO11FL periplasmic chaperone YP_006162513.1 200999 D 595495 CDS YP_006162514.1 386698677 12759674 201488..202513 1 NC_017660.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 202513 lpxD 12759674 lpxD Escherichia coli KO11FL UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_006162514.1 201488 D 595495 CDS YP_006162515.1 386698678 12759675 202618..203073 1 NC_017660.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase 203073 fabZ 12759675 fabZ Escherichia coli KO11FL (3R)-hydroxymyristoyl-ACP dehydratase YP_006162515.1 202618 D 595495 CDS YP_006162516.1 386698679 12759676 203077..203865 1 NC_017660.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase 203865 lpxA 12759676 lpxA Escherichia coli KO11FL UDP-N-acetylglucosamine acyltransferase YP_006162516.1 203077 D 595495 CDS YP_006162517.1 386698680 12759677 203865..205013 1 NC_017660.1 COG0763 Lipid A disaccharide synthetase; lipid-A-disaccharide synthase 205013 lpxB 12759677 lpxB Escherichia coli KO11FL lipid-A-disaccharide synthase YP_006162517.1 203865 D 595495 CDS YP_006162518.1 386698681 12759678 205010..205606 1 NC_017660.1 COG0164 Ribonuclease HII; ribonuclease HII 205606 rnhB 12759678 rnhB Escherichia coli KO11FL ribonuclease HII YP_006162518.1 205010 D 595495 CDS YP_006162519.1 386698682 12759679 205643..209125 1 NC_017660.1 COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 209125 dnaE 12759679 dnaE Escherichia coli KO11FL DNA polymerase III subunit alpha YP_006162519.1 205643 D 595495 CDS YP_006162520.1 386698683 12759680 209138..210097 1 NC_017660.1 COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 210097 accA 12759680 accA Escherichia coli KO11FL acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_006162520.1 209138 D 595495 CDS YP_006162521.1 386698684 12759681 210196..212337 1 NC_017660.1 COG1982 Arginine/lysine/ornithine decarboxylases; lysine decarboxylase LdcC 212337 ldcC 12759681 ldcC Escherichia coli KO11FL lysine decarboxylase LdcC YP_006162521.1 210196 D 595495 CDS YP_006162522.1 386698685 12759682 212394..212783 1 NC_017660.1 COG0346 Lactoylglutathione lyase and related lyases; putative lyase 212783 yaeR 12759682 yaeR Escherichia coli KO11FL putative lyase YP_006162522.1 212394 D 595495 CDS YP_006162523.1 386698686 12759683 212848..214146 1 NC_017660.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthetase 214146 tilS 12759683 tilS Escherichia coli KO11FL tRNA(Ile)-lysidine synthetase YP_006162523.1 212848 D 595495 CDS YP_006162524.1 386698687 12759684 complement(214195..214455) 1 NC_017660.1 COG4568 Transcriptional antiterminator; Rho-binding antiterminator 214455 rof 12759684 rof Escherichia coli KO11FL Rho-binding antiterminator YP_006162524.1 214195 R 595495 CDS YP_006162525.1 386698688 12759685 complement(214442..214642) 1 NC_017660.1 yaeP; hypothetical protein 214642 12759685 KO11_00920 Escherichia coli KO11FL hypothetical protein YP_006162525.1 214442 R 595495 CDS YP_006162526.1 386698689 12759686 214808..215353 1 NC_017660.1 COG4681 Uncharacterized protein conserved in bacteria; yaeQ; hypothetical protein 215353 12759686 KO11_00925 Escherichia coli KO11FL hypothetical protein YP_006162526.1 214808 D 595495 CDS YP_006162527.1 386698690 12759687 215350..215772 1 NC_017660.1 COG1186 Protein chain release factor B; yaeJ; hypothetical protein 215772 12759687 KO11_00930 Escherichia coli KO11FL hypothetical protein YP_006162527.1 215350 D 595495 CDS YP_006162528.1 386698691 12759688 215786..216496 1 NC_017660.1 COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance; lipoprotein involved with copper homeostasis and adhesion 216496 nlpE 12759688 nlpE Escherichia coli KO11FL lipoprotein involved with copper homeostasis and adhesion YP_006162528.1 215786 D 595495 CDS YP_006162529.1 386698692 12759689 complement(216651..217475) 1 NC_017660.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins); yaeF; hypothetical protein 217475 12759689 KO11_00940 Escherichia coli KO11FL hypothetical protein YP_006162529.1 216651 R 595495 CDS YP_006162530.1 386698693 12759690 complement(217529..219247) 1 NC_017660.1 COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase 219247 proS 12759690 proS Escherichia coli KO11FL prolyl-tRNA synthetase YP_006162530.1 217529 R 595495 CDS YP_006162531.1 386698694 12759691 complement(219358..220065) 1 NC_017660.1 COG1720 Uncharacterized conserved protein; yaeB; hypothetical protein 220065 12759691 KO11_00950 Escherichia coli KO11FL hypothetical protein YP_006162531.1 219358 R 595495 CDS YP_006162532.1 386698695 12759692 complement(220062..220466) 1 NC_017660.1 outer membrane lipoprotein 220466 rcsF 12759692 rcsF Escherichia coli KO11FL outer membrane lipoprotein YP_006162532.1 220062 R 595495 CDS YP_006162533.1 386698696 12759693 complement(220584..221399) 1 NC_017660.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; DL-methionine transporter substrate-binding subunit 221399 metQ 12759693 metQ Escherichia coli KO11FL DL-methionine transporter substrate-binding subunit YP_006162533.1 220584 R 595495 CDS YP_006162534.1 386698697 12759694 complement(221439..222092) 1 NC_017660.1 COG2011 ABC-type metal ion transport system, permease component; DL-methionine transporter permease 222092 metI 12759694 metI Escherichia coli KO11FL DL-methionine transporter permease YP_006162534.1 221439 R 595495 CDS YP_006162535.1 386698698 12759695 complement(222085..223116) 1 NC_017660.1 COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit 223116 metN 12759695 metN Escherichia coli KO11FL DL-methionine transporter ATP-binding subunit YP_006162535.1 222085 R 595495 CDS YP_006162536.1 386698699 12759696 223304..223879 1 NC_017660.1 COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase 223879 gmhB 12759696 gmhB Escherichia coli KO11FL D,D-heptose 1,7-bisphosphate phosphatase YP_006162536.1 223304 D 595495 CDS YP_006162537.1 386698700 12759703 229638..230441 1 NC_017660.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase; 2,5-diketo-D-gluconate reductase B 230441 dkgB 12759703 dkgB Escherichia coli KO11FL 2,5-diketo-D-gluconate reductase B YP_006162537.1 229638 D 595495 CDS YP_006162538.1 386698701 12759704 complement(230438..231352) 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 231352 yafC 12759704 yafC Escherichia coli KO11FL LysR family transcriptional regulator YP_006162538.1 230438 R 595495 CDS YP_006162539.1 386698702 12759705 231614..232393 1 NC_017660.1 COG3021 Uncharacterized protein conserved in bacteria; yafD; hypothetical protein 232393 12759705 KO11_00990 Escherichia coli KO11FL hypothetical protein YP_006162539.1 231614 D 595495 CDS YP_006162540.1 386698703 12759706 232471..233241 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; putative biotin synthesis protein 233241 yafE 12759706 yafE Escherichia coli KO11FL putative biotin synthesis protein YP_006162540.1 232471 D 595495 CDS YP_006162541.1 386698704 12759707 complement(233289..234509) 1 NC_017660.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); membrane-bound lytic murein transglycosylase D 234509 mltD 12759707 mltD Escherichia coli KO11FL membrane-bound lytic murein transglycosylase D YP_006162541.1 233289 R 595495 CDS YP_006162542.1 386698705 12759708 complement(234719..235474) 1 NC_017660.1 COG0491 Zn-dependent hydrolases, including glyoxylases; hydroxyacylglutathione hydrolase 235474 gloB 12759708 gloB Escherichia coli KO11FL hydroxyacylglutathione hydrolase YP_006162542.1 234719 R 595495 CDS YP_006162543.1 386698706 12759709 235508..236230 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; putative S-adenosyl-L-methionine-dependent methyltransferase 236230 yafS 12759709 yafS Escherichia coli KO11FL putative S-adenosyl-L-methionine-dependent methyltransferase YP_006162543.1 235508 D 595495 CDS YP_006162544.1 386698707 12759710 complement(236227..236694) 1 NC_017660.1 COG0328 Ribonuclease HI; ribonuclease H 236694 rnhA 12759710 rnhA Escherichia coli KO11FL ribonuclease H YP_006162544.1 236227 R 595495 CDS YP_006162545.1 386698708 12759711 236759..237490 1 NC_017660.1 COG0847 DNA polymerase III, epsilon subunit and related 3-5 exonucleases; DNA polymerase III subunit epsilon 237490 dnaQ 12759711 dnaQ Escherichia coli KO11FL DNA polymerase III subunit epsilon YP_006162545.1 236759 D 595495 CDS YP_006162546.1 386698709 12759713 238030..238815 1 NC_017660.1 putative aminopeptidase 238815 yafT 12759713 yafT Escherichia coli KO11FL putative aminopeptidase YP_006162546.1 238030 D 595495 CDS YP_006162547.1 386698710 12759714 complement(238952..239431) 1 NC_017660.1 ykfM; hypothetical protein 239431 12759714 KO11_01030 Escherichia coli KO11FL hypothetical protein YP_006162547.1 238952 R 595495 CDS YP_006162548.1 386698711 12759715 complement(239441..240355) 1 NC_017660.1 yafU; hypothetical protein 240355 12759715 KO11_01035 Escherichia coli KO11FL hypothetical protein YP_006162548.1 239441 R 595495 CDS YP_006162549.1 386698712 12759716 complement(240399..240881) 1 NC_017660.1 COG3157 Hemolysin-coregulated protein (uncharacterized); Hcp-like protein 240881 12759716 KO11_01040 Escherichia coli KO11FL Hcp-like protein YP_006162549.1 240399 R 595495 CDS YP_006162550.1 386698713 12759717 complement(240905..242257) 1 NC_017660.1 COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein 242257 12759717 KO11_01045 Escherichia coli KO11FL hypothetical protein YP_006162550.1 240905 R 595495 CDS YP_006162551.1 386698714 12759718 complement(242268..245732) 1 NC_017660.1 COG3523 Uncharacterized protein conserved in bacteria; IcmF-like protein 245732 12759718 KO11_01050 Escherichia coli KO11FL IcmF-like protein YP_006162551.1 242268 R 595495 CDS YP_006162552.1 386698715 12759719 complement(245811..247223) 1 NC_017660.1 COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein 247223 12759719 KO11_01055 Escherichia coli KO11FL hypothetical protein YP_006162552.1 245811 R 595495 CDS YP_006162553.1 386698716 12759720 complement(247228..247971) 1 NC_017660.1 hypothetical protein 247971 12759720 KO11_01060 Escherichia coli KO11FL hypothetical protein YP_006162553.1 247228 R 595495 CDS YP_006162554.1 386698717 12759721 complement(247968..250775) 1 NC_017660.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity 250775 12759721 KO11_01065 Escherichia coli KO11FL putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity YP_006162554.1 247968 R 595495 CDS YP_006162555.1 386698718 12759722 complement(250784..251545) 1 NC_017660.1 COG3455 Uncharacterized protein conserved in bacteria; putative membrane protein Aec26 251545 12759722 KO11_01070 Escherichia coli KO11FL putative membrane protein Aec26 YP_006162555.1 250784 R 595495 CDS YP_006162556.1 386698719 12759723 complement(251550..252881) 1 NC_017660.1 COG3522 Uncharacterized protein conserved in bacteria; hypothetical protein 252881 12759723 KO11_01075 Escherichia coli KO11FL hypothetical protein YP_006162556.1 251550 R 595495 CDS YP_006162557.1 386698720 12759724 complement(252884..253408) 1 NC_017660.1 COG3521 Uncharacterized protein conserved in bacteria; putative lipoprotein 253408 12759724 KO11_01080 Escherichia coli KO11FL putative lipoprotein YP_006162557.1 252884 R 595495 CDS YP_006162558.1 386698721 12759725 complement(253405..254685) 1 NC_017660.1 COG3456 Uncharacterized conserved protein, contains FHA domain; type VI secretion system protein ImpI 254685 12759725 KO11_01085 Escherichia coli KO11FL type VI secretion system protein ImpI YP_006162558.1 253405 R 595495 CDS YP_006162559.1 386698722 12759726 complement(254710..255792) 1 NC_017660.1 COG3520 Uncharacterized protein conserved in bacteria; hypothetical protein 255792 12759726 KO11_01090 Escherichia coli KO11FL hypothetical protein YP_006162559.1 254710 R 595495 CDS YP_006162560.1 386698723 12759727 complement(255756..257606) 1 NC_017660.1 COG3519 Uncharacterized protein conserved in bacteria; type VI secretion system protein ImpG 257606 12759727 KO11_01095 Escherichia coli KO11FL type VI secretion system protein ImpG YP_006162560.1 255756 R 595495 CDS YP_006162561.1 386698724 12759728 complement(257610..258023) 1 NC_017660.1 COG3518 Uncharacterized protein conserved in bacteria; hypothetical protein 258023 12759728 KO11_01100 Escherichia coli KO11FL hypothetical protein YP_006162561.1 257610 R 595495 CDS YP_006162562.1 386698725 12759729 complement(258030..259505) 1 NC_017660.1 COG3517 Uncharacterized protein conserved in bacteria; hypothetical protein 259505 12759729 KO11_01105 Escherichia coli KO11FL hypothetical protein YP_006162562.1 258030 R 595495 CDS YP_006162563.1 386698726 12759730 complement(259556..259780) 1 NC_017660.1 COG3517 Uncharacterized protein conserved in bacteria; hypothetical protein 259780 12759730 KO11_01110 Escherichia coli KO11FL hypothetical protein YP_006162563.1 259556 R 595495 CDS YP_006162564.1 386698727 12759731 complement(259815..260315) 1 NC_017660.1 COG3516 Uncharacterized protein conserved in bacteria; hypothetical protein 260315 12759731 KO11_01115 Escherichia coli KO11FL hypothetical protein YP_006162564.1 259815 R 595495 CDS YP_006162565.1 386698728 12759732 260743..260886 1 NC_017660.1 hypothetical protein 260886 12759732 KO11_01120 Escherichia coli KO11FL hypothetical protein YP_006162565.1 260743 D 595495 CDS YP_006162566.1 386698729 12759733 261013..261531 1 NC_017660.1 COG3157 Hemolysin-coregulated protein (uncharacterized); hypothetical protein 261531 12759733 KO11_01125 Escherichia coli KO11FL hypothetical protein YP_006162566.1 261013 D 595495 CDS YP_006162567.1 386698730 12759734 261741..263882 1 NC_017660.1 COG3501 Uncharacterized protein conserved in bacteria; VgrG protein 263882 12759734 KO11_01130 Escherichia coli KO11FL VgrG protein YP_006162567.1 261741 D 595495 CDS YP_006162568.1 386698731 12759735 263958..268007 1 NC_017660.1 COG3209 Rhs family protein; Rhs core protein 268007 rhsW1 12759735 rhsW1 Escherichia coli KO11FL Rhs core protein YP_006162568.1 263958 D 595495 CDS YP_006162569.1 386698732 12759736 267967..268404 1 NC_017660.1 hypothetical protein 268404 12759736 KO11_01140 Escherichia coli KO11FL hypothetical protein YP_006162569.1 267967 D 595495 CDS YP_006162570.1 386698733 12759737 268754..269167 1 NC_017660.1 COG5433 Transposase; transposase IS4 family protein 269167 12759737 KO11_01142 Escherichia coli KO11FL transposase IS4 family protein YP_006162570.1 268754 D 595495 CDS YP_006162571.1 386698734 12759738 269275..270411 1 NC_017660.1 COG5433 Transposase; putative receptor 270411 12759738 KO11_01145 Escherichia coli KO11FL putative receptor YP_006162571.1 269275 D 595495 CDS YP_006162572.1 386698735 12759739 complement(270453..271223) 1 NC_017660.1 COG0388 Predicted amidohydrolase; C-N hydrolase family amidase 271223 yafV 12759739 yafV Escherichia coli KO11FL C-N hydrolase family amidase YP_006162572.1 270453 R 595495 CDS YP_006162573.1 386698736 12759740 271377..271850 1 NC_017660.1 C-lysozyme inhibitor 271850 ivy 12759740 ivy Escherichia coli KO11FL C-lysozyme inhibitor YP_006162573.1 271377 D 595495 CDS YP_006162574.1 386698737 12759741 complement(271893..274337) 1 NC_017660.1 COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 274337 fadE 12759741 fadE Escherichia coli KO11FL acyl-CoA dehydrogenase YP_006162574.1 271893 R 595495 CDS YP_006162575.1 386698738 12759742 274577..275155 1 NC_017660.1 COG0279 Phosphoheptose isomerase; phosphoheptose isomerase 275155 lpcA 12759742 lpcA Escherichia coli KO11FL phosphoheptose isomerase YP_006162575.1 274577 D 595495 CDS YP_006162576.1 386698739 12759743 275361..276128 1 NC_017660.1 COG0121 Predicted glutamine amidotransferase; putative amidotransfease 276128 yafJ 12759743 yafJ Escherichia coli KO11FL putative amidotransfease YP_006162576.1 275361 D 595495 CDS YP_006162577.1 386698740 12759744 complement(276099..276839) 1 NC_017660.1 COG3034 Uncharacterized protein conserved in bacteria; yafK; hypothetical protein 276839 12759744 KO11_01175 Escherichia coli KO11FL hypothetical protein YP_006162577.1 276099 R 595495 CDS YP_006162578.1 386698741 12759745 complement(276995..277273) 1 NC_017660.1 COG3041 Uncharacterized protein conserved in bacteria; putative toxin of YafQ-DinJ toxin-antitoxin system 277273 yafQ 12759745 yafQ Escherichia coli KO11FL putative toxin of YafQ-DinJ toxin-antitoxin system YP_006162578.1 276995 R 595495 CDS YP_006162579.1 386698742 12759746 complement(277276..277536) 1 NC_017660.1 COG3077 DNA-damage-inducible protein J; DNA-damage-inducible protein J 277536 dinJ 12759746 dinJ Escherichia coli KO11FL DNA-damage-inducible protein J YP_006162579.1 277276 R 595495 CDS YP_006162580.1 386698743 12759747 277746..278495 1 NC_017660.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins); putative exported hydrolase 278495 yafL 12759747 yafL Escherichia coli KO11FL putative exported hydrolase YP_006162580.1 277746 D 595495 CDS YP_006162581.1 386698744 12759748 complement(278552..278908) 1 NC_017660.1 COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters; putative HicB 278908 12759748 KO11_01195 Escherichia coli KO11FL putative HicB YP_006162581.1 278552 R 595495 CDS YP_006162582.1 386698745 12759749 complement(278901..279179) 1 NC_017660.1 hypothetical protein 279179 12759749 KO11_01200 Escherichia coli KO11FL hypothetical protein YP_006162582.1 278901 R 595495 CDS YP_006162583.1 386698746 12759750 complement(279284..281377) 1 NC_017660.1 COG1298 Flagellar biosynthesis pathway, component FlhA; putative lateral flagellar system protein 281377 lfhA 12759750 lfhA Escherichia coli KO11FL putative lateral flagellar system protein YP_006162583.1 279284 R 595495 CDS YP_006162584.1 386698747 12759751 complement(281361..282500) 1 NC_017660.1 COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 282500 flhB2 12759751 flhB2 Escherichia coli KO11FL flagellar biosynthesis protein FlhB YP_006162584.1 281361 R 595495 CDS YP_006162585.1 386698748 12759752 complement(282490..283272) 1 NC_017660.1 COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthetic protein FliR 283272 fliR2 12759752 fliR2 Escherichia coli KO11FL flagellar biosynthetic protein FliR YP_006162585.1 282490 R 595495 CDS YP_006162586.1 386698749 12759753 complement(283274..283549) 1 NC_017660.1 COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthetic protein FliQ 283549 fliQ2 12759753 fliQ2 Escherichia coli KO11FL flagellar biosynthetic protein FliQ YP_006162586.1 283274 R 595495 CDS YP_006162587.1 386698750 12759754 complement(283549..284301) 1 NC_017660.1 COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP 284301 fliP2 12759754 fliP2 Escherichia coli KO11FL flagellar biosynthesis protein FliP YP_006162587.1 283549 R 595495 CDS YP_006162588.1 386698751 12759755 complement(284298..284669) 1 NC_017660.1 COG1886 Flagellar motor switch/type III secretory pathway protein; putative lateral flagellar motor switching and energizing component 284669 12759755 KO11_01230 Escherichia coli KO11FL putative lateral flagellar motor switching and energizing component YP_006162588.1 284298 R 595495 CDS YP_006162589.1 386698752 12759756 complement(284662..285513) 1 NC_017660.1 putative lateral flagellar export/assembly protein 285513 12759756 KO11_01235 Escherichia coli KO11FL putative lateral flagellar export/assembly protein YP_006162589.1 284662 R 595495 CDS YP_006162590.1 386698753 12759757 285900..286886 1 NC_017660.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; putative lateral flagellar RpoN-interacting regulatory protein 286886 12759757 KO11_01240 Escherichia coli KO11FL putative lateral flagellar RpoN-interacting regulatory protein YP_006162590.1 285900 D 595495 CDS YP_006162591.1 386698754 12759758 286901..287242 1 NC_017660.1 COG1677 Flagellar hook-basal body protein; putative lateral flagellar basal-body component protein 287242 12759758 KO11_01245 Escherichia coli KO11FL putative lateral flagellar basal-body component protein YP_006162591.1 286901 D 595495 CDS YP_006162592.1 386698755 12759759 287247..288893 1 NC_017660.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein 288893 fliF2 12759759 fliF2 Escherichia coli KO11FL flagellar MS-ring protein YP_006162592.1 287247 D 595495 CDS YP_006162593.1 386698756 12759760 288871..289881 1 NC_017660.1 COG1536 Flagellar motor switch protein; flagellar motor switch protein G 289881 fliG2 12759760 fliG2 Escherichia coli KO11FL flagellar motor switch protein G YP_006162593.1 288871 D 595495 CDS YP_006162594.1 386698757 12759761 289885..290595 1 NC_017660.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H 290595 fliH2 12759761 fliH2 Escherichia coli KO11FL flagellar assembly protein H YP_006162594.1 289885 D 595495 CDS YP_006162595.1 386698758 12759762 290588..291925 1 NC_017660.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; FliI/YscN family ATPase 291925 12759762 KO11_01265 Escherichia coli KO11FL FliI/YscN family ATPase YP_006162595.1 290588 D 595495 CDS YP_006162596.1 386698759 12759763 291928..292362 1 NC_017660.1 flagellar export protein FliJ 292362 fliJ2 12759763 fliJ2 Escherichia coli KO11FL flagellar export protein FliJ YP_006162596.1 291928 D 595495 CDS YP_006162597.1 386698760 12759764 292365..292760 1 NC_017660.1 COG0615 Cytidylyltransferase; putative glycerol-3-phosphate cytidylyltransferase 292760 12759764 KO11_01275 Escherichia coli KO11FL putative glycerol-3-phosphate cytidylyltransferase YP_006162597.1 292365 D 595495 CDS YP_006162598.1 386698761 12759765 complement(292915..293610) 1 NC_017660.1 phage Mu Mom protein; phage DNA modification protein 293610 mom 12759765 mom Escherichia coli KO11FL phage DNA modification protein YP_006162598.1 292915 R 595495 CDS YP_006162599.1 386698762 12759766 complement(293561..293749) 1 NC_017660.1 phage Mu Com protein; translational regulator of Mom 293749 12759766 KO11_01282 Escherichia coli KO11FL translational regulator of Mom YP_006162599.1 293561 R 595495 CDS YP_006162600.1 386698763 12759767 complement(293844..294425) 1 NC_017660.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs; phage Mu G-segment invertase; putative DNA-invertase 294425 12759767 KO11_01285 Escherichia coli KO11FL putative DNA-invertase YP_006162600.1 293844 R 595495 CDS YP_006162601.1 386698764 12759768 294455..295450 1 NC_017660.1 phage Mu tail fiber protein; putative bacteriophage tail protein 295450 12759768 KO11_01290 Escherichia coli KO11FL putative bacteriophage tail protein YP_006162601.1 294455 D 595495 CDS YP_006162602.1 386698765 12759769 295453..295986 1 NC_017660.1 phage Mu tail fiber assembly protein; putative tail fiber assembly protein 295986 12759769 KO11_01295 Escherichia coli KO11FL putative tail fiber assembly protein YP_006162602.1 295453 D 595495 CDS YP_006162603.1 386698766 12759770 complement(296015..296542) 1 NC_017660.1 phage Mu tail fiber assembly protein; putative phage tail fiber protein 296542 12759770 KO11_01300 Escherichia coli KO11FL putative phage tail fiber protein YP_006162603.1 296015 R 595495 CDS YP_006162604.1 386698767 12759771 complement(296545..298059) 1 NC_017660.1 phage Mu tail fiber protein; phage tail fiber protein 298059 12759771 KO11_01305 Escherichia coli KO11FL phage tail fiber protein YP_006162604.1 296545 R 595495 CDS YP_006162605.1 386698768 12759772 complement(298059..298601) 1 NC_017660.1 COG3778 Uncharacterized protein conserved in bacteria; phage Mu gp48; hypothetical protein 298601 12759772 KO11_01310 Escherichia coli KO11FL hypothetical protein YP_006162605.1 298059 R 595495 CDS YP_006162606.1 386698769 12759773 complement(298592..299674) 1 NC_017660.1 COG3299 Uncharacterized homolog of phage Mu protein gp47; phage Mu baseplate assembly protein J; hypothetical protein 299674 12759773 KO11_01315 Escherichia coli KO11FL hypothetical protein YP_006162606.1 298592 R 595495 CDS YP_006162607.1 386698770 12759774 complement(299675..300112) 1 NC_017660.1 COG4381 Mu-like prophage protein gp46; phage Mu gp46; hypothetical protein 300112 12759774 KO11_01320 Escherichia coli KO11FL hypothetical protein YP_006162607.1 299675 R 595495 CDS YP_006162608.1 386698771 12759775 complement(300109..300702) 1 NC_017660.1 COG4384 Mu-like prophage protein gp45; phage Mu baseplate assembly protein V; hypothetical protein 300702 12759775 KO11_01325 Escherichia coli KO11FL hypothetical protein YP_006162608.1 300109 R 595495 CDS YP_006162609.1 386698772 12759776 complement(300690..301829) 1 NC_017660.1 COG4379 Mu-like prophage tail protein gpP; phage Mu gpP tail protein; hypothetical protein 301829 12759776 KO11_01330 Escherichia coli KO11FL hypothetical protein YP_006162609.1 300690 R 595495 CDS YP_006162610.1 386698773 12759777 complement(301822..303309) 1 NC_017660.1 COG4228 Mu-like prophage DNA circulation protein; phage Mu gpN protein; putative DNA circulation protein 303309 12759777 KO11_01335 Escherichia coli KO11FL putative DNA circulation protein YP_006162610.1 301822 R 595495 CDS YP_006162611.1 386698774 12759778 complement(303314..305386) 1 NC_017660.1 COG3941 Mu-like prophage protein; phage Mu gp42 protein; phage tape measure protein 305386 12759778 KO11_01340 Escherichia coli KO11FL phage tape measure protein YP_006162611.1 303314 R 595495 CDS YP_006162612.1 386698775 12759779 complement(305531..305965) 1 NC_017660.1 COG4518 Mu-like prophage FluMu protein gp41; phage Mu gp41 protein; hypothetical protein 305965 12759779 KO11_01345 Escherichia coli KO11FL hypothetical protein YP_006162612.1 305531 R 595495 CDS YP_006162613.1 386698776 12759780 complement(305975..306331) 1 NC_017660.1 phage Mu M tail tube protein; hypothetical protein 306331 12759780 KO11_01350 Escherichia coli KO11FL hypothetical protein YP_006162613.1 305975 R 595495 CDS YP_006162614.1 386698777 12759781 complement(306341..307828) 1 NC_017660.1 COG4386 Mu-like prophage tail sheath protein gpL; phage Mu gpL protein; phage major tail subunit 307828 12759781 KO11_01355 Escherichia coli KO11FL phage major tail subunit YP_006162614.1 306341 R 595495 CDS YP_006162615.1 386698778 12759782 complement(307825..308031) 1 NC_017660.1 phage Mu gp38 protein; hypothetical protein 308031 12759782 KO11_01360 Escherichia coli KO11FL hypothetical protein YP_006162615.1 307825 R 595495 CDS YP_006162616.1 386698779 12759783 complement(308015..308563) 1 NC_017660.1 COG5003 Mu-like prophage protein gp37; phage Mu gp37 protein; hypothetical protein 308563 12759783 KO11_01365 Escherichia coli KO11FL hypothetical protein YP_006162616.1 308015 R 595495 CDS YP_006162617.1 386698780 12759784 complement(308563..308988) 1 NC_017660.1 COG4387 Mu-like prophage protein gp36; phage Mu gpK protein; hypothetical protein 308988 12759784 KO11_01370 Escherichia coli KO11FL hypothetical protein YP_006162617.1 308563 R 595495 CDS YP_006162618.1 386698781 12759785 complement(308985..309395) 1 NC_017660.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; phage Mu gpJ protein; hypothetical protein 309395 12759785 KO11_01375 Escherichia coli KO11FL hypothetical protein YP_006162618.1 308985 R 595495 CDS YP_006162619.1 386698782 12759786 complement(309462..310379) 1 NC_017660.1 COG4397 Mu-like prophage major head subunit gpT; phage Mu gpT protein; putative phage major head subunit 310379 12759786 KO11_01380 Escherichia coli KO11FL putative phage major head subunit YP_006162619.1 309462 R 595495 CDS YP_006162620.1 386698783 12759787 complement(310376..311461) 1 NC_017660.1 COG4388 Mu-like prophage I protein; phage Mu gpI protein; putative phage protease 311461 12759787 KO11_01385 Escherichia coli KO11FL putative phage protease YP_006162620.1 310376 R 595495 CDS YP_006162621.1 386698784 12759788 complement(311658..312128) 1 NC_017660.1 COG5005 Mu-like prophage protein gpG; phage Mu gpG protein; phage virion morphogenesis protein 312128 12759788 KO11_01390 Escherichia coli KO11FL phage virion morphogenesis protein YP_006162621.1 311658 R 595495 CDS YP_006162622.1 386698785 12759789 complement(312125..313444) 1 NC_017660.1 COG2369 Uncharacterized protein, homolog of phage Mu protein gp30; phage Mu head assembly cofactor GpF2; hypothetical protein 313444 12759789 KO11_01395 Escherichia coli KO11FL hypothetical protein YP_006162622.1 312125 R 595495 CDS YP_006162623.1 386698786 12759790 complement(313425..314963) 1 NC_017660.1 COG4383 Mu-like prophage protein gp29; phage Mu portal protein GpF1; hypothetical protein 314963 12759790 KO11_01400 Escherichia coli KO11FL hypothetical protein YP_006162623.1 313425 R 595495 CDS YP_006162624.1 386698787 12759791 complement(314963..316618) 1 NC_017660.1 COG4373 Mu-like prophage FluMu protein gp28; putative phage portal protein 316618 12759791 KO11_01405 Escherichia coli KO11FL putative phage portal protein YP_006162624.1 314963 R 595495 CDS YP_006162625.1 386698788 12759792 complement(316626..317201) 1 NC_017660.1 phage Mu gp27 protein; hypothetical protein 317201 12759792 KO11_01410 Escherichia coli KO11FL hypothetical protein YP_006162625.1 316626 R 595495 CDS YP_006162626.1 386698789 12759793 complement(317213..317503) 1 NC_017660.1 phage Mu gp26 protein; hypothetical protein 317503 12759793 KO11_01415 Escherichia coli KO11FL hypothetical protein YP_006162626.1 317213 R 595495 CDS YP_006162627.1 386698790 12759794 complement(317500..317799) 1 NC_017660.1 phage Mu gp25 protein; hypothetical protein 317799 12759794 KO11_01420 Escherichia coli KO11FL hypothetical protein YP_006162627.1 317500 R 595495 CDS YP_006162628.1 386698791 12759795 complement(317799..317993) 1 NC_017660.1 phage Mu gp24 protein; hypothetical protein 317993 12759795 KO11_01425 Escherichia coli KO11FL hypothetical protein YP_006162628.1 317799 R 595495 CDS YP_006162629.1 386698792 12759796 complement(317950..318255) 1 NC_017660.1 putative Rz1 lytic protein from bacteriophage origin 318255 12759796 KO11_01430 Escherichia coli KO11FL putative Rz1 lytic protein from bacteriophage origin YP_006162629.1 317950 R 595495 CDS YP_006162630.1 386698793 12759797 complement(318152..318538) 1 NC_017660.1 phage Mu gp23 protein; hypothetical protein 318538 12759797 KO11_01435 Escherichia coli KO11FL hypothetical protein YP_006162630.1 318152 R 595495 CDS YP_006162631.1 386698794 12759798 complement(318522..319037) 1 NC_017660.1 COG3772 Phage-related lysozyme (muraminidase); phage Mu Lys protein; endolysin 319037 12759798 KO11_01440 Escherichia coli KO11FL endolysin YP_006162631.1 318522 R 595495 CDS YP_006162632.1 386698795 12759799 complement(319132..319554) 1 NC_017660.1 COG5566 Uncharacterized conserved protein; phage Mu C protein; putative phage transcription regulator 319554 12759799 KO11_01445 Escherichia coli KO11FL putative phage transcription regulator YP_006162632.1 319132 R 595495 CDS YP_006162633.1 386698796 12759800 complement(319567..319686) 1 NC_017660.1 phage Mu gp20 protein; hypothetical protein 319686 12759800 KO11_01450 Escherichia coli KO11FL hypothetical protein YP_006162633.1 319567 R 595495 CDS YP_006162634.1 386698797 12759801 complement(319696..320058) 1 NC_017660.1 phage Mu gp19 protein; hypothetical protein 320058 12759801 KO11_01455 Escherichia coli KO11FL hypothetical protein YP_006162634.1 319696 R 595495 CDS YP_006162635.1 386698798 12759802 complement(320051..320269) 1 NC_017660.1 phage Mu gp18 protein; hypothetical protein 320269 12759802 KO11_01460 Escherichia coli KO11FL hypothetical protein YP_006162635.1 320051 R 595495 CDS YP_006162636.1 386698799 12759803 complement(320347..320736) 1 NC_017660.1 COG5566 Uncharacterized conserved protein; phage Mu Mor protein; putative phage transcription regulator 320736 12759803 KO11_01465 Escherichia coli KO11FL putative phage transcription regulator YP_006162636.1 320347 R 595495 CDS YP_006162637.1 386698800 12759804 complement(320733..321284) 1 NC_017660.1 COG4382 Mu-like prophage protein gp16; phage Mu GemA modulator of host gene expression; hypothetical protein 321284 12759804 KO11_01470 Escherichia coli KO11FL hypothetical protein YP_006162637.1 320733 R 595495 CDS YP_006162638.1 386698801 12759805 complement(321390..321557) 1 NC_017660.1 phage Mu gp15 protein; hypothetical protein 321557 12759805 KO11_01475 Escherichia coli KO11FL hypothetical protein YP_006162638.1 321390 R 595495 CDS YP_006162639.1 386698802 12759806 complement(321560..321862) 1 NC_017660.1 phage Mu gp14; hypothetical protein 321862 12759806 KO11_01480 Escherichia coli KO11FL hypothetical protein YP_006162639.1 321560 R 595495 CDS YP_006162640.1 386698803 12759807 complement(321864..322046) 1 NC_017660.1 COG1066 Predicted ATP-dependent serine protease; phage Mu gp13; hypothetical protein 322046 12759807 KO11_01485 Escherichia coli KO11FL hypothetical protein YP_006162640.1 321864 R 595495 CDS YP_006162641.1 386698804 12759808 complement(322033..322563) 1 NC_017660.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); phage Mu gp12; hypothetical protein 322563 12759808 KO11_01490 Escherichia coli KO11FL hypothetical protein YP_006162641.1 322033 R 595495 CDS YP_006162642.1 386698805 12759809 complement(322563..323093) 1 NC_017660.1 phage Mu gp11; putative prophage DNA binding protein 323093 12759809 KO11_01495 Escherichia coli KO11FL putative prophage DNA binding protein YP_006162642.1 322563 R 595495 CDS YP_006162643.1 386698806 12759810 complement(323192..323716) 1 NC_017660.1 COG4396 Mu-like prophage host-nuclease inhibitor protein Gam; phage Mu Gam proteim; phage host-nuclease inhibitor protein Gam 323716 12759810 KO11_01500 Escherichia coli KO11FL phage host-nuclease inhibitor protein Gam YP_006162643.1 323192 R 595495 CDS YP_006162644.1 386698807 12759811 complement(323736..324023) 1 NC_017660.1 phage Mu gp9; hypothetical protein 324023 12759811 KO11_01505 Escherichia coli KO11FL hypothetical protein YP_006162644.1 323736 R 595495 CDS YP_006162645.1 386698808 12759812 complement(324036..324455) 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; phage Mu gp8; hypothetical protein 324455 12759812 KO11_01510 Escherichia coli KO11FL hypothetical protein YP_006162645.1 324036 R 595495 CDS YP_006162646.1 386698809 12759813 complement(324470..324733) 1 NC_017660.1 phage Mu gpE6; hypothetical protein 324733 12759813 KO11_01515 Escherichia coli KO11FL hypothetical protein YP_006162646.1 324470 R 595495 CDS YP_006162647.1 386698810 12759814 complement(324745..324975) 1 NC_017660.1 phage Mu gpE5; hypothetical protein 324975 12759814 KO11_01520 Escherichia coli KO11FL hypothetical protein YP_006162647.1 324745 R 595495 CDS YP_006162648.1 386698811 12759815 complement(324978..325205) 1 NC_017660.1 phage Mu Kil; putative phage kil protein 325205 12759815 KO11_01525 Escherichia coli KO11FL putative phage kil protein YP_006162648.1 324978 R 595495 CDS YP_006162649.1 386698812 12759816 complement(325221..326159) 1 NC_017660.1 COG2842 Uncharacterized ATPase, putative transposase; phage Mu gpB; putative phage DNA transposition protein 326159 12759816 KO11_01530 Escherichia coli KO11FL putative phage DNA transposition protein YP_006162649.1 325221 R 595495 CDS YP_006162650.1 386698813 12759817 complement(326198..328189) 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; phage Mu gpA; putative phage transposase 328189 12759817 KO11_01535 Escherichia coli KO11FL putative phage transposase YP_006162650.1 326198 R 595495 CDS YP_006162651.1 386698814 12759818 complement(328191..328418) 1 NC_017660.1 COG3423 Predicted transcriptional regulator; phage Mu Ner; putative phage transcriptional regulator 328418 12759818 KO11_01540 Escherichia coli KO11FL putative phage transcriptional regulator YP_006162651.1 328191 R 595495 CDS YP_006162652.1 386698815 12759819 328588..329178 1 NC_017660.1 phage Mu c-repressor; Repressor protein CI 329178 12759819 KO11_01545 Escherichia coli KO11FL Repressor protein CI YP_006162652.1 328588 D 595495 CDS YP_006162653.1 386698816 12759820 complement(329421..329786) 1 NC_017660.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein 329786 12759820 KO11_01550 Escherichia coli KO11FL hypothetical protein YP_006162653.1 329421 R 595495 CDS YP_006162654.1 386698817 12759821 329787..331190 1 NC_017660.1 fragment; COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit 331190 frdA_2 12759821 frdA_2 Escherichia coli KO11FL fumarate reductase flavoprotein subunit YP_006162654.1 329787 D 595495 CDS YP_006162655.1 386698818 12759822 331183..331917 1 NC_017660.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit 331917 frdB 12759822 frdB Escherichia coli KO11FL fumarate reductase iron-sulfur subunit YP_006162655.1 331183 D 595495 CDS YP_006162656.1 386698819 12759823 331928..332323 1 NC_017660.1 COG3029 Fumarate reductase subunit C; fumarate reductase subunit C 332323 frdC 12759823 frdC Escherichia coli KO11FL fumarate reductase subunit C YP_006162656.1 331928 D 595495 CDS YP_006162657.1 386698820 12759824 332334..332693 1 NC_017660.1 COG3080 Fumarate reductase subunit D; fumarate reductase subunit D 332693 frdD 12759824 frdD Escherichia coli KO11FL fumarate reductase subunit D YP_006162657.1 332334 D 595495 CDS YP_006162658.1 386698821 12759825 332756..333889 1 NC_017660.1 COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactamase/D-alanine carboxypeptidase 333889 ampC 12759825 ampC Escherichia coli KO11FL beta-lactamase/D-alanine carboxypeptidase YP_006162658.1 332756 D 595495 CDS YP_006162659.1 386698822 12759826 333978..334511 1 NC_017660.1 COG3040 Bacterial lipocalin; outer membrane lipoprotein Blc 334511 blc 12759826 blc Escherichia coli KO11FL outer membrane lipoprotein Blc YP_006162659.1 333978 D 595495 CDS YP_006162660.1 386698823 12759827 complement(334508..334825) 1 NC_017660.1 COG2076 Membrane transporters of cations and cationic drugs; suppressor of groEL 334825 sugE 12759827 sugE Escherichia coli KO11FL suppressor of groEL YP_006162660.1 334508 R 595495 CDS YP_006162661.1 386698824 12759828 complement(335001..335147) 1 NC_017660.1 COG5510 Predicted small secreted protein; entericidin B membrane lipoprotein 335147 ecnB 12759828 ecnB Escherichia coli KO11FL entericidin B membrane lipoprotein YP_006162661.1 335001 R 595495 CDS YP_006162662.1 386698825 12759829 complement(335258..335380) 1 NC_017660.1 entericidin A 335380 ecnA 12759829 ecnA Escherichia coli KO11FL entericidin A YP_006162662.1 335258 R 595495 CDS YP_006162663.1 386698826 12759830 complement(335435..336001) 1 NC_017660.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 336001 efp 12759830 efp Escherichia coli KO11FL elongation factor P YP_006162663.1 335435 R 595495 CDS YP_006162664.1 386698827 12759831 336043..337071 1 NC_017660.1 COG1509 Lysine 2,3-aminomutase; putative lysine aminomutase 337071 yjeK 12759831 yjeK Escherichia coli KO11FL putative lysine aminomutase YP_006162664.1 336043 D 595495 CDS YP_006162665.1 386698828 12759832 337525..338394 1 NC_017660.1 COG5257 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase); yjeJ; hypothetical protein 338394 12759832 KO11_01610 Escherichia coli KO11FL hypothetical protein YP_006162665.1 337525 D 595495 CDS YP_006162666.1 386698829 12759833 complement(338597..338950) 1 NC_017660.1 yjeI; hypothetical protein 338950 12759833 KO11_01615 Escherichia coli KO11FL hypothetical protein YP_006162666.1 338597 R 595495 CDS YP_006162667.1 386698830 12759834 complement(339088..340734) 1 NC_017660.1 COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL 340734 groL 12759834 groL Escherichia coli KO11FL chaperonin GroEL YP_006162667.1 339088 R 595495 CDS YP_006162668.1 386698831 12759835 complement(340778..341071) 1 NC_017660.1 COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES 341071 groS 12759835 groS Escherichia coli KO11FL co-chaperonin GroES YP_006162668.1 340778 R 595495 CDS YP_006162669.1 386698832 12759836 341347..342603 1 NC_017660.1 COG0531 Amino acid transporters; putative transporter 342603 yjeH 12759836 yjeH Escherichia coli KO11FL putative transporter YP_006162669.1 341347 D 595495 CDS YP_006162670.1 386698833 12759837 complement(342619..343095) 1 NC_017660.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid; phage T7 F exclusion suppressor FxsA 343095 fxsA 12759837 fxsA Escherichia coli KO11FL phage T7 F exclusion suppressor FxsA YP_006162670.1 342619 R 595495 CDS YP_006162671.1 386698834 12759838 343432..344868 1 NC_017660.1 COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase 344868 aspA 12759838 aspA Escherichia coli KO11FL aspartate ammonia-lyase YP_006162671.1 343432 D 595495 CDS YP_006162672.1 386698835 12759839 344986..346287 1 NC_017660.1 COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 346287 dcuA 12759839 dcuA Escherichia coli KO11FL anaerobic C4-dicarboxylate transporter YP_006162672.1 344986 D 595495 CDS YP_006162673.1 386698836 12759840 346403..346741 1 NC_017660.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations; divalent-cation tolerance protein CutA 346741 cutA 12759840 cutA Escherichia coli KO11FL divalent-cation tolerance protein CutA YP_006162673.1 346403 D 595495 CDS YP_006162674.1 386698837 12759841 346717..348414 1 NC_017660.1 COG4232 Thiol:disulfide interchange protein; thiol:disulfide interchange protein 348414 dipZ 12759841 dipZ Escherichia coli KO11FL thiol:disulfide interchange protein YP_006162674.1 346717 D 595495 CDS YP_006162675.1 386698838 12759842 348451..349026 1 NC_017660.1 COG1309 Transcriptional regulator; putative transcriptional regulator 349026 yjdC 12759842 yjdC Escherichia coli KO11FL putative transcriptional regulator YP_006162675.1 348451 D 595495 CDS YP_006162676.1 386698839 12759844 complement(349320..349538) 1 NC_017660.1 hypothetical protein 349538 12759844 KO11_01662 Escherichia coli KO11FL hypothetical protein YP_006162676.1 349320 R 595495 CDS YP_006162677.1 386698840 12759845 349825..351363 1 NC_017660.1 COG3710 DNA-binding winged-HTH domains; DNA-binding transcriptional activator CadC 351363 cadC 12759845 cadC Escherichia coli KO11FL DNA-binding transcriptional activator CadC YP_006162677.1 349825 D 595495 CDS YP_006162678.1 386698841 12759846 351728..353062 1 NC_017660.1 COG0531 Amino acid transporters; lysine/cadaverine antiporter 353062 cadB 12759846 cadB Escherichia coli KO11FL lysine/cadaverine antiporter YP_006162678.1 351728 D 595495 CDS YP_006162679.1 386698842 12759847 353142..355289 1 NC_017660.1 COG1982 Arginine/lysine/ornithine decarboxylases; lysine decarboxylase CadA 355289 cadA 12759847 cadA Escherichia coli KO11FL lysine decarboxylase CadA YP_006162679.1 353142 D 595495 CDS YP_006162680.1 386698843 12759848 355348..356805 1 NC_017660.1 COG3104 Dipeptide/tripeptide permease; putative transporter 356805 yjdL 12759848 yjdL Escherichia coli KO11FL putative transporter YP_006162680.1 355348 D 595495 CDS YP_006162681.1 386698844 12759849 357042..358559 1 NC_017660.1 COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 358559 lysU 12759849 lysU Escherichia coli KO11FL lysyl-tRNA synthetase YP_006162681.1 357042 D 595495 CDS YP_006162682.1 386698845 12759850 complement(358678..358851) 1 NC_017660.1 yjdO; hypothetical protein 358851 12759850 KO11_01690 Escherichia coli KO11FL hypothetical protein YP_006162682.1 358678 R 595495 CDS YP_006162683.1 386698846 12759851 complement(358879..359175) 1 NC_017660.1 yjdK; hypothetical protein 359175 12759851 KO11_01695 Escherichia coli KO11FL hypothetical protein YP_006162683.1 358879 R 595495 CDS YP_006162684.1 386698847 12759852 complement(359402..359674) 1 NC_017660.1 COG2388 Predicted acetyltransferase; putative acyltransferase with acyl-CoA N-acyltransferase domain 359674 yjdJ 12759852 yjdJ Escherichia coli KO11FL putative acyltransferase with acyl-CoA N-acyltransferase domain YP_006162684.1 359402 R 595495 CDS YP_006162685.1 386698848 12759853 complement(359686..359916) 1 NC_017660.1 COG3592 Uncharacterized conserved protein; yjdI; hypothetical protein 359916 12759853 KO11_01705 Escherichia coli KO11FL hypothetical protein YP_006162685.1 359686 R 595495 CDS YP_006162686.1 386698849 12759854 360097..361728 1 NC_017660.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; sensory histidine kinase DcuS 361728 dcuS 12759854 dcuS Escherichia coli KO11FL sensory histidine kinase DcuS YP_006162686.1 360097 D 595495 CDS YP_006162687.1 386698850 12759855 361725..362444 1 NC_017660.1 COG4565 Response regulator of citrate/malate metabolism; DNA-binding transcriptional activator DcuR 362444 dcuR 12759855 dcuR Escherichia coli KO11FL DNA-binding transcriptional activator DcuR YP_006162687.1 361725 D 595495 CDS YP_006162688.1 386698851 12759856 363015..364355 1 NC_017660.1 COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 364355 dcuB 12759856 dcuB Escherichia coli KO11FL anaerobic C4-dicarboxylate transporter YP_006162688.1 363015 D 595495 CDS YP_006162689.1 386698852 12759857 364433..366079 1 NC_017660.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; fumarate hydratase FumB 366079 fumB 12759857 fumB Escherichia coli KO11FL fumarate hydratase FumB YP_006162689.1 364433 D 595495 CDS YP_006162690.1 386698853 12759858 366201..366830 1 NC_017660.1 COG3647 Predicted membrane protein; yjdF; hypothetical protein 366830 12759858 KO11_01730 Escherichia coli KO11FL hypothetical protein YP_006162690.1 366201 D 595495 CDS YP_006162691.1 386698854 12759859 complement(366969..368378) 1 NC_017660.1 COG2211 Na+/melibiose symporter and related transporters; melibiose:sodium symporter 368378 melB 12759859 melB Escherichia coli KO11FL melibiose:sodium symporter YP_006162691.1 366969 R 595495 CDS YP_006162692.1 386698855 12759860 complement(368493..369848) 1 NC_017660.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; alpha-galactosidase 369848 melA 12759860 melA Escherichia coli KO11FL alpha-galactosidase YP_006162692.1 368493 R 595495 CDS YP_006162693.1 386698856 12759861 370131..371039 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator MelR 371039 melR 12759861 melR Escherichia coli KO11FL DNA-binding transcriptional regulator MelR YP_006162693.1 370131 D 595495 CDS YP_006162694.1 386698857 12759862 371238..373505 1 NC_017660.1 COG1982 Arginine/lysine/ornithine decarboxylases; arginine decarboxylase 373505 adiA 12759862 adiA Escherichia coli KO11FL arginine decarboxylase YP_006162694.1 371238 D 595495 CDS YP_006162695.1 386698858 12759863 373830..374591 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator 374591 adiY 12759863 adiY Escherichia coli KO11FL DNA-binding transcriptional activator YP_006162695.1 373830 D 595495 CDS YP_006162696.1 386698859 12759864 374728..376065 1 NC_017660.1 COG0531 Amino acid transporters; arginine:agmatin antiporter 376065 adiC 12759864 adiC Escherichia coli KO11FL arginine:agmatin antiporter YP_006162696.1 374728 D 595495 CDS YP_006162697.1 386698860 12759865 376199..377812 1 NC_017660.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase; putative metal dependent hydrolase 377812 eptA 12759865 eptA Escherichia coli KO11FL putative metal dependent hydrolase YP_006162697.1 376199 D 595495 CDS YP_006162698.1 386698861 12759866 377809..378477 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator BasR 378477 basR 12759866 basR Escherichia coli KO11FL DNA-binding transcriptional regulator BasR YP_006162698.1 377809 D 595495 CDS YP_006162699.1 386698862 12759867 378478..379578 1 NC_017660.1 COG0642 Signal transduction histidine kinase; sensor protein BasS/PmrB 379578 basS 12759867 basS Escherichia coli KO11FL sensor protein BasS/PmrB YP_006162699.1 378478 D 595495 CDS YP_006162700.1 386698863 12759868 complement(379755..381257) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; proline/glycine betaine transporter 381257 proP 12759868 proP Escherichia coli KO11FL proline/glycine betaine transporter YP_006162700.1 379755 R 595495 CDS YP_006162701.1 386698864 12759869 complement(381521..382399) 1 NC_017660.1 yjcZ; hypothetical protein 382399 12759869 KO11_01785 Escherichia coli KO11FL hypothetical protein YP_006162701.1 381521 R 595495 CDS YP_006162702.1 386698865 12759870 complement(382396..384624) 1 NC_017660.1 COG0699 Predicted GTPases (dynamin-related); yjdA; hypothetical protein 384624 12759870 KO11_01790 Escherichia coli KO11FL hypothetical protein YP_006162702.1 382396 R 595495 CDS YP_006162703.1 386698866 12759871 384947..385360 1 NC_017660.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; putative alkylphosphonate uptake protein in phosphonate metabolism 385360 yjdM 12759871 yjdM Escherichia coli KO11FL putative alkylphosphonate uptake protein in phosphonate metabolism YP_006162703.1 384947 D 595495 CDS YP_006162704.1 386698867 12759872 386018..386461 1 NC_017660.1 COG2764 Uncharacterized protein conserved in bacteria; yjdN; hypothetical protein 386461 12759872 KO11_01800 Escherichia coli KO11FL hypothetical protein YP_006162704.1 386018 D 595495 CDS YP_006162705.1 386698868 12759873 386594..387382 1 NC_017660.1 COG3638 ABC-type phosphate/phosphonate transport system, ATPase component; phosphonate/organophosphate ester transporter subunit 387382 phnC 12759873 phnC Escherichia coli KO11FL phosphonate/organophosphate ester transporter subunit YP_006162705.1 386594 D 595495 CDS YP_006162706.1 386698869 12759874 387407..388423 1 NC_017660.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component; phosphonate/organophosphate ester transporter subunit PhnD 388423 phnD 12759874 phnD Escherichia coli KO11FL phosphonate/organophosphate ester transporter subunit PhnD YP_006162706.1 387407 D 595495 CDS YP_006162707.1 386698870 12759875 388529..389098 1 NC_017660.1 COG3639 ABC-type phosphate/phosphonate transport system, permease component; membrane channel protein component of Pn transporter 389098 phnE 12759875 phnE Escherichia coli KO11FL membrane channel protein component of Pn transporter YP_006162707.1 388529 D 595495 CDS YP_006162708.1 386698871 12759876 389337..390062 1 NC_017660.1 COG2188 Transcriptional regulators; phosphonate metabolism transcriptional regulator PhnF 390062 phnF 12759876 phnF Escherichia coli KO11FL phosphonate metabolism transcriptional regulator PhnF YP_006162708.1 389337 D 595495 CDS YP_006162709.1 386698872 12759877 390063..390515 1 NC_017660.1 COG3624 Uncharacterized enzyme of phosphonate metabolism; carbon-phosphorus lyase complex subunit 390515 phnG 12759877 phnG Escherichia coli KO11FL carbon-phosphorus lyase complex subunit YP_006162709.1 390063 D 595495 CDS YP_006162710.1 386698873 12759878 390512..391096 1 NC_017660.1 COG3625 Uncharacterized enzyme of phosphonate metabolism; carbon-phosphorus lyase complex subunit 391096 phnH 12759878 phnH Escherichia coli KO11FL carbon-phosphorus lyase complex subunit YP_006162710.1 390512 D 595495 CDS YP_006162711.1 386698874 12759879 391096..392160 1 NC_017660.1 COG3626 Uncharacterized enzyme of phosphonate metabolism; carbon-phosphorus lyase complex subunit 392160 phnI 12759879 phnI Escherichia coli KO11FL carbon-phosphorus lyase complex subunit YP_006162711.1 391096 D 595495 CDS YP_006162712.1 386698875 12759880 392153..392998 1 NC_017660.1 COG3627 Uncharacterized enzyme of phosphonate metabolism; carbon-phosphorus lyase complex subunit 392998 phnJ 12759880 phnJ Escherichia coli KO11FL carbon-phosphorus lyase complex subunit YP_006162712.1 392153 D 595495 CDS YP_006162713.1 386698876 12759881 392995..393753 1 NC_017660.1 COG4107 ABC-type phosphonate transport system, ATPase component; phosphonate C-P lyase system protein PhnK 393753 phnK 12759881 phnK Escherichia coli KO11FL phosphonate C-P lyase system protein PhnK YP_006162713.1 392995 D 595495 CDS YP_006162714.1 386698877 12759882 393864..394544 1 NC_017660.1 COG4778 ABC-type phosphonate transport system, ATPase component; carbon-phosphorus lyase complex subunit PhnL 394544 phnL 12759882 phnL Escherichia coli KO11FL carbon-phosphorus lyase complex subunit PhnL YP_006162714.1 393864 D 595495 CDS YP_006162715.1 386698878 12759883 394541..395677 1 NC_017660.1 COG3454 Metal-dependent hydrolase involved in phosphonate metabolism; phosphonate metabolism protein PhnM 395677 phnM 12759883 phnM Escherichia coli KO11FL phosphonate metabolism protein PhnM YP_006162715.1 394541 D 595495 CDS YP_006162716.1 386698879 12759884 395677..396234 1 NC_017660.1 COG3709 Uncharacterized component of phosphonate metabolism; ribose 1,5-bisphosphokinase 396234 phnN 12759884 phnN Escherichia coli KO11FL ribose 1,5-bisphosphokinase YP_006162716.1 395677 D 595495 CDS YP_006162717.1 386698880 12759885 396221..396655 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; aminoalkylphosphonic acid N-acetyltransferase 396655 phnO 12759885 phnO Escherichia coli KO11FL aminoalkylphosphonic acid N-acetyltransferase YP_006162717.1 396221 D 595495 CDS YP_006162718.1 386698881 12759886 396657..397415 1 NC_017660.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; carbon-phosphorus lyase complex accessory protein 397415 phnP 12759886 phnP Escherichia coli KO11FL carbon-phosphorus lyase complex accessory protein YP_006162718.1 396657 D 595495 CDS YP_006162719.1 386698882 12759887 complement(397562..397891) 1 NC_017660.1 yjdP; hypothetical protein 397891 12759887 KO11_01880 Escherichia coli KO11FL hypothetical protein YP_006162719.1 397562 R 595495 CDS YP_006162720.1 386698883 12759888 complement(397960..398409) 1 NC_017660.1 COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B 398409 rpiB 12759888 rpiB Escherichia coli KO11FL ribose-5-phosphate isomerase B YP_006162720.1 397960 R 595495 CDS YP_006162721.1 386698884 12759889 complement(398603..398707) 1 NC_017660.1 hypothetical protein 398707 12759889 KO11_01890 Escherichia coli KO11FL hypothetical protein YP_006162721.1 398603 R 595495 CDS YP_006162722.1 386698885 12759890 398768..399658 1 NC_017660.1 COG1737 Transcriptional regulators; DNA-binding transcriptional repressor RpiR 399658 rpiR 12759890 rpiR Escherichia coli KO11FL DNA-binding transcriptional repressor RpiR YP_006162722.1 398768 D 595495 CDS YP_006162723.1 386698886 12759891 399717..400652 1 NC_017660.1 COG1879 ABC-type sugar transport system, periplasmic component; D-allose transporter subunit 400652 alsB 12759891 alsB Escherichia coli KO11FL D-allose transporter subunit YP_006162723.1 399717 D 595495 CDS YP_006162724.1 386698887 12759892 400779..402311 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; D-allose transporter ATP-binding protein 402311 alsA 12759892 alsA Escherichia coli KO11FL D-allose transporter ATP-binding protein YP_006162724.1 400779 D 595495 CDS YP_006162725.1 386698888 12759893 402290..403270 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; D-allose transporter subunit 403270 alsC 12759893 alsC Escherichia coli KO11FL D-allose transporter subunit YP_006162725.1 402290 D 595495 CDS YP_006162726.1 386698889 12759894 403281..403976 1 NC_017660.1 COG0036 Pentose-5-phosphate-3-epimerase; allulose-6-phosphate 3-epimerase 403976 alsE 12759894 alsE Escherichia coli KO11FL allulose-6-phosphate 3-epimerase YP_006162726.1 403281 D 595495 CDS YP_006162727.1 386698890 12759895 403960..404889 1 NC_017660.1 COG1940 Transcriptional regulator/sugar kinase; D-allose kinase 404889 alsK 12759895 alsK Escherichia coli KO11FL D-allose kinase YP_006162727.1 403960 D 595495 CDS YP_006162728.1 386698891 12759896 405162..405356 1 NC_017660.1 fragmented by IS10 insertion; putative alkyl sulfatase 405356 yjcS1 12759896 yjcS1 Escherichia coli KO11FL putative alkyl sulfatase YP_006162728.1 405162 D 595495 CDS YP_006162729.1 386698892 12759897 complement(405366..406574) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase IS4 family protein 406574 12759897 KO11_01930 Escherichia coli KO11FL transposase IS4 family protein YP_006162729.1 405366 R 595495 CDS YP_006162730.1 386698893 12759898 406647..408485 1 NC_017660.1 COG2015 Alkyl sulfatase and related hydrolases; putative alkyl sulfatase 408485 yjcS2 12759898 yjcS2 Escherichia coli KO11FL putative alkyl sulfatase YP_006162730.1 406647 D 595495 CDS YP_006162731.1 386698894 12759899 408694..408969 1 NC_017660.1 formate dehydrogenase H 408969 ytcA 12759899 ytcA Escherichia coli KO11FL formate dehydrogenase H YP_006162731.1 408694 D 595495 CDS YP_006162732.1 386698895 12759900 408988..410019 1 NC_017660.1 COG1566 Multidrug resistance efflux pump; multidrug resistance protein MdtN 410019 mdtN 12759900 mdtN Escherichia coli KO11FL multidrug resistance protein MdtN YP_006162732.1 408988 D 595495 CDS YP_006162733.1 386698896 12759901 410019..412070 1 NC_017660.1 COG1289 Predicted membrane protein; multidrug efflux system protein MdtO 412070 mdtO 12759901 mdtO Escherichia coli KO11FL multidrug efflux system protein MdtO YP_006162733.1 410019 D 595495 CDS YP_006162734.1 386698897 12759902 412067..413533 1 NC_017660.1 COG1538 Outer membrane protein; putative outer membrane efflux protein MdtP 413533 mdtP 12759902 mdtP Escherichia coli KO11FL putative outer membrane efflux protein MdtP YP_006162734.1 412067 D 595495 CDS YP_006162735.1 386698898 12759903 413731..415878 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-H, selenopolypeptide subunit 415878 fdhF1 12759903 fdhF1 Escherichia coli KO11FL formate dehydrogenase-H, selenopolypeptide subunit YP_006162735.1 413731 D 595495 CDS YP_006162736.1 386698899 12759904 415972..416661 1 NC_017660.1 COG0790 FOG: TPR repeat, SEL1 subfamily; yjcO; hypothetical protein 416661 12759904 KO11_01970 Escherichia coli KO11FL hypothetical protein YP_006162736.1 415972 D 595495 CDS YP_006162737.1 386698900 12759905 complement(417192..418505) 1 NC_017660.1 COG1301 Na+/H+-dicarboxylate symporters; glutamate/aspartate:proton symporter 418505 gltP 12759905 gltP Escherichia coli KO11FL glutamate/aspartate:proton symporter YP_006162737.1 417192 R 595495 CDS YP_006162738.1 386698901 12759906 complement(418847..419443) 1 NC_017660.1 COG4235 Cytochrome c biogenesis factor; formate-dependent nitrite reductase complex subunit NrfG 419443 nfrG 12759906 nfrG Escherichia coli KO11FL formate-dependent nitrite reductase complex subunit NrfG YP_006162738.1 418847 R 595495 CDS YP_006162739.1 386698902 12759907 complement(419440..419823) 1 NC_017660.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; formate-dependent nitrite reductase complex subunit NrfF 419823 nfrF 12759907 nfrF Escherichia coli KO11FL formate-dependent nitrite reductase complex subunit NrfF YP_006162739.1 419440 R 595495 CDS YP_006162740.1 386698903 12759908 complement(419816..421423) 1 NC_017660.1 COG1138 Cytochrome c biogenesis factor; heme lyase subunit NrfE 421423 nfrE 12759908 nfrE Escherichia coli KO11FL heme lyase subunit NrfE YP_006162740.1 419816 R 595495 CDS YP_006162741.1 386698904 12759909 complement(421554..422510) 1 NC_017660.1 COG3301 Formate-dependent nitrite reductase, membrane component; formate-dependent nitrite reductase complex subunit NrfD 422510 nfrD 12759909 nfrD Escherichia coli KO11FL formate-dependent nitrite reductase complex subunit NrfD YP_006162741.1 421554 R 595495 CDS YP_006162742.1 386698905 12759910 complement(422507..423178) 1 NC_017660.1 COG0437 Fe-S-cluster-containing hydrogenase components 1; formate-dependent nitrite reductase, Fe-S centers 423178 nfrC 12759910 nfrC Escherichia coli KO11FL formate-dependent nitrite reductase, Fe-S centers YP_006162742.1 422507 R 595495 CDS YP_006162743.1 386698906 12759911 complement(423175..423741) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; cytochrome c nitrite reductase pentaheme subunit 423741 nfrB 12759911 nfrB Escherichia coli KO11FL cytochrome c nitrite reductase pentaheme subunit YP_006162743.1 423175 R 595495 CDS YP_006162744.1 386698907 12759912 complement(423786..425222) 1 NC_017660.1 COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; cytochrome c nitrite reductase subunit c552 425222 nrfA 12759912 nrfA Escherichia coli KO11FL cytochrome c nitrite reductase subunit c552 YP_006162744.1 423786 R 595495 CDS YP_006162745.1 386698908 12759913 425615..427573 1 NC_017660.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetyl-CoA synthetase 427573 acs 12759913 acs Escherichia coli KO11FL acetyl-CoA synthetase YP_006162745.1 425615 D 595495 CDS YP_006162746.1 386698909 12759914 427773..428087 1 NC_017660.1 COG3162 Predicted membrane protein; yjcH; hypothetical protein 428087 12759914 KO11_02025 Escherichia coli KO11FL hypothetical protein YP_006162746.1 427773 D 595495 CDS YP_006162747.1 386698910 12759915 428084..429733 1 NC_017660.1 COG4147 Predicted symporter; acetate permease 429733 actP 12759915 actP Escherichia coli KO11FL acetate permease YP_006162747.1 428084 D 595495 CDS YP_006162748.1 386698911 12759916 429911..431203 1 NC_017660.1 COG1357 Uncharacterized low-complexity proteins; yjcF; hypothetical protein 431203 12759916 KO11_02035 Escherichia coli KO11FL hypothetical protein YP_006162748.1 429911 D 595495 CDS YP_006162749.1 386698912 12759917 complement(431357..433006) 1 NC_017660.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; putative cation/proton antiporter 433006 yjcE 12759917 yjcE Escherichia coli KO11FL putative cation/proton antiporter YP_006162749.1 431357 R 595495 CDS YP_006162750.1 386698913 12759918 complement(433158..434507) 1 NC_017660.1 COG2252 Permeases; putative permease 434507 yjcD 12759918 yjcD Escherichia coli KO11FL putative permease YP_006162750.1 433158 R 595495 CDS YP_006162751.1 386698914 12759919 complement(435053..435517) 1 NC_017660.1 COG0789 Predicted transcriptional regulators; redox-sensitivie transcriptional activator Soxr 435517 soxR 12759919 soxR Escherichia coli KO11FL redox-sensitivie transcriptional activator Soxr YP_006162751.1 435053 R 595495 CDS YP_006162752.1 386698915 12759920 435603..435926 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator SoxS 435926 soxS 12759920 soxS Escherichia coli KO11FL DNA-binding transcriptional regulator SoxS YP_006162752.1 435603 D 595495 CDS YP_006162753.1 386698916 12759921 complement(435929..437515) 1 NC_017660.1 COG4943 Predicted signal transduction protein containing sensor and EAL domains; EAL domain-containing protein 437515 yjcC 12759921 yjcC Escherichia coli KO11FL EAL domain-containing protein YP_006162753.1 435929 R 595495 CDS YP_006162754.1 386698917 12759922 437945..438226 1 NC_017660.1 yjcB; hypothetical protein 438226 12759922 KO11_02065 Escherichia coli KO11FL hypothetical protein YP_006162754.1 437945 D 595495 CDS YP_006162755.1 386698918 12759923 complement(438325..438861) 1 NC_017660.1 COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein 438861 ssb 12759923 ssb Escherichia coli KO11FL single-stranded DNA-binding protein YP_006162755.1 438325 R 595495 CDS YP_006162756.1 386698919 12759924 439115..441937 1 NC_017660.1 COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A 441937 uvrA 12759924 uvrA Escherichia coli KO11FL excinuclease ABC subunit A YP_006162756.1 439115 D 595495 CDS YP_006162757.1 386698920 12759925 complement(441972..442328) 1 NC_017660.1 COG2315 Uncharacterized protein conserved in bacteria; yjbR; hypothetical protein 442328 12759925 KO11_02080 Escherichia coli KO11FL hypothetical protein YP_006162757.1 441972 R 595495 CDS YP_006162758.1 386698921 12759926 complement(442332..442748) 1 NC_017660.1 COG0432 Uncharacterized conserved protein; yjbQ; hypothetical protein 442748 12759926 KO11_02085 Escherichia coli KO11FL hypothetical protein YP_006162758.1 442332 R 595495 CDS YP_006162759.1 386698922 12759927 complement(442859..443572) 1 NC_017660.1 COG3700 Acid phosphatase (class B); acid phosphatase/phosphotransferase 443572 aphA 12759927 aphA Escherichia coli KO11FL acid phosphatase/phosphotransferase YP_006162759.1 442859 R 595495 CDS YP_006162760.1 386698923 12759928 complement(444678..445871) 1 NC_017660.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase 445871 tyrB 12759928 tyrB Escherichia coli KO11FL aromatic amino acid aminotransferase YP_006162760.1 444678 R 595495 CDS YP_006162761.1 386698924 12759929 complement(446124..447203) 1 NC_017660.1 COG0787 Alanine racemase; alanine racemase 447203 alr 12759929 alr Escherichia coli KO11FL alanine racemase YP_006162761.1 446124 R 595495 CDS YP_006162762.1 386698925 12759930 complement(447256..448671) 1 NC_017660.1 COG0305 Replicative DNA helicase; replicative DNA helicase 448671 dnaB 12759930 dnaB Escherichia coli KO11FL replicative DNA helicase YP_006162762.1 447256 R 595495 CDS YP_006162763.1 386698926 12759931 448754..449737 1 NC_017660.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; quinone oxidoreductase 449737 qor 12759931 qor Escherichia coli KO11FL quinone oxidoreductase YP_006162763.1 448754 D 595495 CDS YP_006162764.1 386698927 12759932 complement(449903..450145) 1 NC_017660.1 phage shock protein G 450145 pspG 12759932 pspG Escherichia coli KO11FL phage shock protein G YP_006162764.1 449903 R 595495 CDS YP_006162765.1 386698928 12759933 complement(450279..451298) 1 NC_017660.1 COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase A 451298 dusA 12759933 dusA Escherichia coli KO11FL tRNA-dihydrouridine synthase A YP_006162765.1 450279 R 595495 CDS YP_006162766.1 386698929 12759934 complement(451680..452702) 1 NC_017660.1 yjbM; hypothetical protein 452702 12759934 KO11_02125 Escherichia coli KO11FL hypothetical protein YP_006162766.1 451680 R 595495 CDS YP_006162767.1 386698930 12759935 453020..453535 1 NC_017660.1 COG0735 Fe2+/Zn2+ uptake regulation proteins; zinc uptake transcriptional repressor 453535 zur 12759935 zur Escherichia coli KO11FL zinc uptake transcriptional repressor YP_006162767.1 453020 D 595495 CDS YP_006162768.1 386698931 12759936 complement(453577..453786) 1 NC_017660.1 COG3237 Uncharacterized protein conserved in bacteria; yjbJ; hypothetical protein 453786 12759936 KO11_02135 Escherichia coli KO11FL hypothetical protein YP_006162768.1 453577 R 595495 CDS YP_006162769.1 386698932 12759937 complement(453902..455227) 1 NC_017660.1 COG0534 Na+-driven multidrug efflux pump; DNA-damage-inducible SOS response protein 455227 dinF 12759937 dinF Escherichia coli KO11FL DNA-damage-inducible SOS response protein YP_006162769.1 453902 R 595495 CDS YP_006162770.1 386698933 12759938 complement(455300..455908) 1 NC_017660.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); LexA repressor 455908 lexA 12759938 lexA Escherichia coli KO11FL LexA repressor YP_006162770.1 455300 R 595495 CDS YP_006162771.1 386698934 12759939 complement(456018..456386) 1 NC_017660.1 COG0818 Diacylglycerol kinase; diacylglycerol kinase 456386 dgkA 12759939 dgkA Escherichia coli KO11FL diacylglycerol kinase YP_006162771.1 456018 R 595495 CDS YP_006162772.1 386698935 12759940 456557..458980 1 NC_017660.1 COG2937 Glycerol-3-phosphate O-acyltransferase; glycerol-3-phosphate acyltransferase 458980 plsB 12759940 plsB Escherichia coli KO11FL glycerol-3-phosphate acyltransferase YP_006162772.1 456557 D 595495 CDS YP_006162773.1 386698936 12759941 complement(459135..460007) 1 NC_017660.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; 4-hydroxybenzoate octaprenyltransferase 460007 ubiA 12759941 ubiA Escherichia coli KO11FL 4-hydroxybenzoate octaprenyltransferase YP_006162773.1 459135 R 595495 CDS YP_006162774.1 386698937 12759942 complement(460020..460517) 1 NC_017660.1 COG3161 4-hydroxybenzoate synthetase (chorismate lyase); chorismate pyruvate lyase 460517 ubiC 12759942 ubiC Escherichia coli KO11FL chorismate pyruvate lyase YP_006162774.1 460020 R 595495 CDS YP_006162775.1 386698938 12759943 complement(460740..462068) 1 NC_017660.1 COG1357 Uncharacterized low-complexity proteins; yjbI; hypothetical protein 462068 12759943 KO11_02170 Escherichia coli KO11FL hypothetical protein YP_006162775.1 460740 R 595495 CDS YP_006162776.1 386698939 12759944 complement(462126..462320) 1 NC_017660.1 hypothetical protein 462320 12759944 KO11_02175 Escherichia coli KO11FL hypothetical protein YP_006162776.1 462126 R 595495 CDS YP_006162777.1 386698940 12759945 complement(462549..463469) 1 NC_017660.1 maltose regulon periplasmic protein 463469 malM 12759945 malM Escherichia coli KO11FL maltose regulon periplasmic protein YP_006162777.1 462549 R 595495 CDS YP_006162778.1 386698941 12759946 complement(463712..465049) 1 NC_017660.1 COG4580 Maltoporin (phage lambda and maltose receptor); maltoporin 465049 lamB 12759946 lamB Escherichia coli KO11FL maltoporin YP_006162778.1 463712 R 595495 CDS YP_006162779.1 386698942 12759947 complement(465124..466239) 1 NC_017660.1 COG3839 ABC-type sugar transport systems, ATPase components; maltose/maltodextrin transporter ATP-binding protein 466239 malK 12759947 malK Escherichia coli KO11FL maltose/maltodextrin transporter ATP-binding protein YP_006162779.1 465124 R 595495 CDS YP_006162780.1 386698943 12759948 466416..466511 1 NC_017660.1 hypothetical protein 466511 12759948 KO11_02195 Escherichia coli KO11FL hypothetical protein YP_006162780.1 466416 D 595495 CDS YP_006162781.1 386698944 12759949 466604..467794 1 NC_017660.1 COG2182 Maltose-binding periplasmic proteins/domains; maltose ABC transporter periplasmic protein 467794 malE 12759949 malE Escherichia coli KO11FL maltose ABC transporter periplasmic protein YP_006162781.1 466604 D 595495 CDS YP_006162782.1 386698945 12759950 467948..469492 1 NC_017660.1 COG1175 ABC-type sugar transport systems, permease components; maltose transporter membrane protein 469492 malF 12759950 malF Escherichia coli KO11FL maltose transporter membrane protein YP_006162782.1 467948 D 595495 CDS YP_006162783.1 386698946 12759951 469507..470397 1 NC_017660.1 COG3833 ABC-type maltose transport systems, permease component; maltose transporter permease 470397 malG 12759951 malG Escherichia coli KO11FL maltose transporter permease YP_006162783.1 469507 D 595495 CDS YP_006162784.1 386698947 12759952 470769..472244 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; D-xylose transporter XylE 472244 xylE 12759952 xylE Escherichia coli KO11FL D-xylose transporter XylE YP_006162784.1 470769 D 595495 CDS YP_006162785.1 386698948 12759953 complement(472288..472698) 1 NC_017660.1 COG3223 Predicted membrane protein; phosphate-starvation-inducible protein PsiE 472698 psiE 12759953 psiE Escherichia coli KO11FL phosphate-starvation-inducible protein PsiE YP_006162785.1 472288 R 595495 CDS YP_006162786.1 386698949 12759954 472968..473246 1 NC_017660.1 yjbT; hypothetical protein 473246 12759954 KO11_02225 Escherichia coli KO11FL hypothetical protein YP_006162786.1 472968 D 595495 CDS YP_006162787.1 386698950 12759955 complement(473293..475389) 1 NC_017660.1 putative porin 475389 yjbH 12759955 yjbH Escherichia coli KO11FL putative porin YP_006162787.1 473293 R 595495 CDS YP_006162788.1 386698951 12759956 complement(475389..476126) 1 NC_017660.1 yjbG; hypothetical protein 476126 12759956 KO11_02235 Escherichia coli KO11FL hypothetical protein YP_006162788.1 475389 R 595495 CDS YP_006162789.1 386698952 12759957 complement(476123..476761) 1 NC_017660.1 yjbF; hypothetical protein 476761 12759957 KO11_02240 Escherichia coli KO11FL hypothetical protein YP_006162789.1 476123 R 595495 CDS YP_006162790.1 386698953 12759958 complement(476875..477117) 1 NC_017660.1 yjbE; hypothetical protein 477117 12759958 KO11_02245 Escherichia coli KO11FL hypothetical protein YP_006162790.1 476875 R 595495 CDS YP_006162791.1 386698954 12759959 complement(477472..479121) 1 NC_017660.1 COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 479121 pgi 12759959 pgi Escherichia coli KO11FL glucose-6-phosphate isomerase YP_006162791.1 477472 R 595495 CDS YP_006162792.1 386698955 12759960 479646..480995 1 NC_017660.1 COG0527 Aspartokinases; aspartate kinase III 480995 lysC 12759960 lysC Escherichia coli KO11FL aspartate kinase III YP_006162792.1 479646 D 595495 CDS YP_006162793.1 386698956 12759961 481140..482066 1 NC_017660.1 COG0464 ATPases of the AAA+ class; hypothetical protein 482066 12759961 KO11_02260 Escherichia coli KO11FL hypothetical protein YP_006162793.1 481140 D 595495 CDS YP_006162794.1 386698957 12759962 complement(482102..482866) 1 NC_017660.1 COG3541 Predicted nucleotidyltransferase; hypothetical protein 482866 12759962 KO11_02265 Escherichia coli KO11FL hypothetical protein YP_006162794.1 482102 R 595495 CDS YP_006162795.1 386698958 12759963 complement(482899..484026) 1 NC_017660.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 484026 12759963 KO11_02270 Escherichia coli KO11FL hypothetical protein YP_006162795.1 482899 R 595495 CDS YP_006162796.1 386698959 12759964 484556..484828 1 NC_017660.1 pagB; hypothetical protein 484828 12759964 KO11_02280 Escherichia coli KO11FL hypothetical protein YP_006162796.1 484556 D 595495 CDS YP_006162797.1 386698960 12759965 complement(484829..485701) 1 NC_017660.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridine synthase F 485701 rluF 12759965 rluF Escherichia coli KO11FL 23S rRNA pseudouridine synthase F YP_006162797.1 484829 R 595495 CDS YP_006162798.1 386698961 12759966 485913..486602 1 NC_017660.1 COG3340 Peptidase E; (alpha)-aspartyl dipeptidase 486602 pepE 12759966 pepE Escherichia coli KO11FL (alpha)-aspartyl dipeptidase YP_006162798.1 485913 D 595495 CDS YP_006162799.1 386698962 12759967 complement(486693..488249) 1 NC_017660.1 COG1283 Na+/phosphate symporter; putative transporter 488249 yjbB 12759967 yjbB Escherichia coli KO11FL putative transporter YP_006162799.1 486693 R 595495 CDS YP_006162800.1 386698963 12759968 complement(488544..492227) 1 NC_017660.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain; B12-dependent methionine synthase 492227 metH 12759968 metH Escherichia coli KO11FL B12-dependent methionine synthase YP_006162800.1 488544 R 595495 CDS YP_006162801.1 386698964 12759969 492427..493251 1 NC_017660.1 COG1414 Transcriptional regulator; IclR family transcriptional regulator 493251 iclR 12759969 iclR Escherichia coli KO11FL IclR family transcriptional regulator YP_006162801.1 492427 D 595495 CDS YP_006162802.1 386698965 12759970 493568..495142 1 NC_017660.1 ShET2 enterotoxin domain-containing protein 495142 arpA 12759970 arpA Escherichia coli KO11FL ShET2 enterotoxin domain-containing protein YP_006162802.1 493568 D 595495 CDS YP_006162803.1 386698966 12759971 complement(495111..496847) 1 NC_017660.1 COG4579 Isocitrate dehydrogenase kinase/phosphatase; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 496847 aceK 12759971 aceK Escherichia coli KO11FL bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_006162803.1 495111 R 595495 CDS YP_006162804.1 386698967 12759972 complement(497030..498334) 1 NC_017660.1 COG2224 Isocitrate lyase; isocitrate lyase 498334 aceA 12759972 aceA Escherichia coli KO11FL isocitrate lyase YP_006162804.1 497030 R 595495 CDS YP_006162805.1 386698968 12759973 complement(498364..499965) 1 NC_017660.1 COG2225 Malate synthase; malate synthase 499965 aceB 12759973 aceB Escherichia coli KO11FL malate synthase YP_006162805.1 498364 R 595495 CDS YP_006162806.1 386698969 12759974 complement(500234..501163) 1 NC_017660.1 COG1897 Homoserine trans-succinylase; homoserine O-succinyltransferase 501163 metA 12759974 metA Escherichia coli KO11FL homoserine O-succinyltransferase YP_006162806.1 500234 R 595495 CDS YP_006162807.1 386698970 12759975 501320..501763 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase 501763 yjaB 12759975 yjaB Escherichia coli KO11FL putative acetyltransferase YP_006162807.1 501320 D 595495 CDS YP_006162808.1 386698971 12759980 507506..509095 1 NC_017660.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 509095 purH 12759980 purH Escherichia coli KO11FL bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_006162808.1 507506 D 595495 CDS YP_006162809.1 386698972 12759981 509107..510396 1 NC_017660.1 COG0151 Phosphoribosylamine-glycine ligase; phosphoribosylamine--glycine ligase 510396 purD 12759981 purD Escherichia coli KO11FL phosphoribosylamine--glycine ligase YP_006162809.1 509107 D 595495 CDS YP_006162810.1 386698973 12759982 complement(510393..511718) 1 NC_017660.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; transcriptional regulatory protein ZraR 511718 zraR 12759982 zraR Escherichia coli KO11FL transcriptional regulatory protein ZraR YP_006162810.1 510393 R 595495 CDS YP_006162811.1 386698974 12759983 complement(511715..513091) 1 NC_017660.1 COG0642 Signal transduction histidine kinase; sensor protein ZraS 513091 zraS 12759983 zraS Escherichia coli KO11FL sensor protein ZraS YP_006162811.1 511715 R 595495 CDS YP_006162812.1 386698975 12759984 513329..513754 1 NC_017660.1 COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; zinc resistance protein 513754 zraP 12759984 zraP Escherichia coli KO11FL zinc resistance protein YP_006162812.1 513329 D 595495 CDS YP_006162813.1 386698976 12759985 complement(513756..514391) 1 NC_017660.1 yjaH; hypothetical protein 514391 12759985 KO11_02365 Escherichia coli KO11FL hypothetical protein YP_006162813.1 513756 R 595495 CDS YP_006162814.1 386698977 12759986 complement(514464..514736) 1 NC_017660.1 COG0776 Bacterial nucleoid DNA-binding protein; transcriptional regulator HU subunit alpha 514736 hupA 12759986 hupA Escherichia coli KO11FL transcriptional regulator HU subunit alpha YP_006162814.1 514464 R 595495 CDS YP_006162815.1 386698978 12759987 complement(514923..515513) 1 NC_017660.1 COG3068 Uncharacterized protein conserved in bacteria; yjaG; hypothetical protein 515513 12759987 KO11_02375 Escherichia coli KO11FL hypothetical protein YP_006162815.1 514923 R 595495 CDS YP_006162816.1 386698979 12759988 complement(515556..516227) 1 NC_017660.1 COG1515 Deoxyinosine 3endonuclease (endonuclease V); endonuclease V 516227 nfi 12759988 nfi Escherichia coli KO11FL endonuclease V YP_006162816.1 515556 R 595495 CDS YP_006162817.1 386698980 12759989 complement(516237..517301) 1 NC_017660.1 COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 517301 hemE 12759989 hemE Escherichia coli KO11FL uroporphyrinogen decarboxylase YP_006162817.1 516237 R 595495 CDS YP_006162818.1 386698981 12759990 complement(517341..518114) 1 NC_017660.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding; NADH pyrophosphatase 518114 nudC 12759990 nudC Escherichia coli KO11FL NADH pyrophosphatase YP_006162818.1 517341 R 595495 CDS YP_006162819.1 386698982 12759991 518209..518685 1 NC_017660.1 COG3160 Regulator of sigma D; anti-RNA polymerase sigma 70 factor 518685 rsd 12759991 rsd Escherichia coli KO11FL anti-RNA polymerase sigma 70 factor YP_006162819.1 518209 D 595495 CDS YP_006162820.1 386698983 12759992 518918..520813 1 NC_017660.1 COG0422 Thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 520813 thiC 12759992 thiC Escherichia coli KO11FL thiamine biosynthesis protein ThiC YP_006162820.1 518918 D 595495 CDS YP_006162821.1 386698984 12759993 520813..521448 1 NC_017660.1 COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 521448 thiE 12759993 thiE Escherichia coli KO11FL thiamine-phosphate pyrophosphorylase YP_006162821.1 520813 D 595495 CDS YP_006162822.1 386698985 12759994 521441..522196 1 NC_017660.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; thiamin biosynthesis protein ThiF 522196 thiF 12759994 thiF Escherichia coli KO11FL thiamin biosynthesis protein ThiF YP_006162822.1 521441 D 595495 CDS YP_006162823.1 386698986 12759995 522180..522380 1 NC_017660.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis; sulfur carrier protein ThiS 522380 thiS 12759995 thiS Escherichia coli KO11FL sulfur carrier protein ThiS YP_006162823.1 522180 D 595495 CDS YP_006162824.1 386698987 12759996 522382..523152 1 NC_017660.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis; thiazole synthase 523152 thiG 12759996 thiG Escherichia coli KO11FL thiazole synthase YP_006162824.1 522382 D 595495 CDS YP_006162825.1 386698988 12759997 523149..524282 1 NC_017660.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; thiamine biosynthesis protein ThiH 524282 thiH 12759997 thiH Escherichia coli KO11FL thiamine biosynthesis protein ThiH YP_006162825.1 523149 D 595495 CDS YP_006162826.1 386698989 12759998 complement(524523..528746) 1 NC_017660.1 COG0086 DNA-directed RNA polymerase, beta subunit/160 kD subunit; DNA-directed RNA polymerase subunit beta' 528746 rpoC 12759998 rpoC Escherichia coli KO11FL DNA-directed RNA polymerase subunit beta' YP_006162826.1 524523 R 595495 CDS YP_006162827.1 386698990 12759999 complement(528823..532851) 1 NC_017660.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta 532851 rpoB 12759999 rpoB Escherichia coli KO11FL DNA-directed RNA polymerase subunit beta YP_006162827.1 528823 R 595495 CDS YP_006162828.1 386698991 12760000 complement(533171..533536) 1 NC_017660.1 COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 533536 rplL 12760000 rplL Escherichia coli KO11FL 50S ribosomal protein L7/L12 YP_006162828.1 533171 R 595495 CDS YP_006162829.1 386698992 12760001 complement(533603..534100) 1 NC_017660.1 COG0244 Ribosomal protein L10; 50S ribosomal protein L10 534100 rplJ 12760001 rplJ Escherichia coli KO11FL 50S ribosomal protein L10 YP_006162829.1 533603 R 595495 CDS YP_006162830.1 386698993 12760002 complement(534513..535217) 1 NC_017660.1 COG0081 Ribosomal protein L1; 50S ribosomal protein L1 535217 rplA 12760002 rplA Escherichia coli KO11FL 50S ribosomal protein L1 YP_006162830.1 534513 R 595495 CDS YP_006162831.1 386698994 12760003 complement(535221..535649) 1 NC_017660.1 COG0080 Ribosomal protein L11; 50S ribosomal protein L11 535649 rplK 12760003 rplK Escherichia coli KO11FL 50S ribosomal protein L11 YP_006162831.1 535221 R 595495 CDS YP_006162832.1 386698995 12760004 complement(535808..536353) 1 NC_017660.1 COG0250 Transcription antiterminator; transcription antitermination protein NusG 536353 nusG 12760004 nusG Escherichia coli KO11FL transcription antitermination protein NusG YP_006162832.1 535808 R 595495 CDS YP_006162833.1 386698996 12760005 complement(536355..536738) 1 NC_017660.1 COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE 536738 secE 12760005 secE Escherichia coli KO11FL preprotein translocase subunit SecE YP_006162833.1 536355 R 595495 CDS YP_006162834.1 386698997 12760006 complement(536968..538152) 1 NC_017660.1 COG0050 GTPases - translation elongation factors; elongation factor Tu 538152 tufB 12760006 tufB Escherichia coli KO11FL elongation factor Tu YP_006162834.1 536968 R 595495 CDS YP_006162835.1 386698998 12760011 539070..540020 1 NC_017660.1 COG1072 Panthothenate kinase; pantothenate kinase 540020 coaA 12760011 coaA Escherichia coli KO11FL pantothenate kinase YP_006162835.1 539070 D 595495 CDS YP_006162836.1 386698999 12760012 complement(540049..541014) 1 NC_017660.1 COG1654 Biotin operon repressor; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor 541014 birA 12760012 birA Escherichia coli KO11FL bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor YP_006162836.1 540049 R 595495 CDS YP_006162837.1 386699000 12760013 complement(541011..542039) 1 NC_017660.1 COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase 542039 murB 12760013 murB Escherichia coli KO11FL UDP-N-acetylenolpyruvoylglucosamine reductase YP_006162837.1 541011 R 595495 CDS YP_006162838.1 386699001 12760018 complement(547808..548596) 1 NC_017660.1 COG0796 Glutamate racemase; glutamate racemase 548596 murI 12760018 murI Escherichia coli KO11FL glutamate racemase YP_006162838.1 547808 R 595495 CDS YP_006162839.1 386699002 12760019 complement(548610..550454) 1 NC_017660.1 COG4206 Outer membrane cobalamin receptor protein; vitamin B12/cobalamin outer membrane transporter 550454 btuB 12760019 btuB Escherichia coli KO11FL vitamin B12/cobalamin outer membrane transporter YP_006162839.1 548610 R 595495 CDS YP_006162840.1 386699003 12760020 550823..551923 1 NC_017660.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; tRNA (uracil-5-)-methyltransferase 551923 trmA 12760020 trmA Escherichia coli KO11FL tRNA (uracil-5-)-methyltransferase YP_006162840.1 550823 D 595495 CDS YP_006162841.1 386699004 12760021 complement(551963..552322) 1 NC_017660.1 yijD; hypothetical protein 552322 12760021 KO11_02510 Escherichia coli KO11FL hypothetical protein YP_006162841.1 551963 R 595495 CDS YP_006162842.1 386699005 12760022 complement(552322..553026) 1 NC_017660.1 COG1309 Transcriptional regulator; DNA-binding transcriptional repressor FabR 553026 fabR 12760022 fabR Escherichia coli KO11FL DNA-binding transcriptional repressor FabR YP_006162842.1 552322 R 595495 CDS YP_006162843.1 386699006 12760023 553303..554703 1 NC_017660.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; soluble pyridine nucleotide transhydrogenase 554703 sthA 12760023 sthA Escherichia coli KO11FL soluble pyridine nucleotide transhydrogenase YP_006162843.1 553303 D 595495 CDS YP_006162844.1 386699007 12760024 complement(554686..555603) 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional regulator OxyR 555603 oxyR 12760024 oxyR Escherichia coli KO11FL DNA-binding transcriptional regulator OxyR YP_006162844.1 554686 R 595495 CDS YP_006162845.1 386699008 12760025 complement(555870..557243) 1 NC_017660.1 COG0165 Argininosuccinate lyase; argininosuccinate lyase 557243 argH 12760025 argH Escherichia coli KO11FL argininosuccinate lyase YP_006162845.1 555870 R 595495 CDS YP_006162846.1 386699009 12760026 complement(557304..558077) 1 NC_017660.1 COG0548 Acetylglutamate kinase; acetylglutamate kinase 558077 argB 12760026 argB Escherichia coli KO11FL acetylglutamate kinase YP_006162846.1 557304 R 595495 CDS YP_006162847.1 386699010 12760027 complement(558088..559092) 1 NC_017660.1 COG0002 Acetylglutamate semialdehyde dehydrogenase; N-acetyl-gamma-glutamyl-phosphate reductase 559092 argC 12760027 argC Escherichia coli KO11FL N-acetyl-gamma-glutamyl-phosphate reductase YP_006162847.1 558088 R 595495 CDS YP_006162848.1 386699011 12760028 559246..560397 1 NC_017660.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; acetylornithine deacetylase 560397 argE 12760028 argE Escherichia coli KO11FL acetylornithine deacetylase YP_006162848.1 559246 D 595495 CDS YP_006162849.1 386699012 12760029 560749..563400 1 NC_017660.1 COG2352 Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 563400 ppc 12760029 ppc Escherichia coli KO11FL phosphoenolpyruvate carboxylase YP_006162849.1 560749 D 595495 CDS YP_006162850.1 386699013 12760030 563583..565316 1 NC_017660.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase; yijP; hypothetical protein 565316 12760030 KO11_02555 Escherichia coli KO11FL hypothetical protein YP_006162850.1 563583 D 595495 CDS YP_006162851.1 386699014 12760031 565465..566316 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator 566316 yijO 12760031 yijO Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006162851.1 565465 D 595495 CDS YP_006162852.1 386699015 12760032 complement(566303..566644) 1 NC_017660.1 COG1445 Phosphotransferase system fructose-specific component IIB; putative PTS system fructose-like transporter subunit EIIB 566644 frwD 12760032 frwD Escherichia coli KO11FL putative PTS system fructose-like transporter subunit EIIB YP_006162852.1 566303 R 595495 CDS YP_006162853.1 386699016 12760033 complement(566646..567524) 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase II activase 567524 pflC 12760033 pflC Escherichia coli KO11FL pyruvate formate lyase II activase YP_006162853.1 566646 R 595495 CDS YP_006162854.1 386699017 12760034 complement(567490..569787) 1 NC_017660.1 COG1882 Pyruvate-formate lyase; putative formate acetyltransferase 2 569787 pflD 12760034 pflD Escherichia coli KO11FL putative formate acetyltransferase 2 YP_006162854.1 567490 R 595495 CDS YP_006162855.1 386699018 12760035 complement(569838..570158) 1 NC_017660.1 COG1445 Phosphotransferase system fructose-specific component IIB; putative PTS system fructose-like transporter subunit EIIB 570158 frwB 12760035 frwB Escherichia coli KO11FL putative PTS system fructose-like transporter subunit EIIB YP_006162855.1 569838 R 595495 CDS YP_006162856.1 386699019 12760036 complement(570173..571252) 1 NC_017660.1 COG1299 Phosphotransferase system, fructose-specific IIC component; putative PTS system fructose-like transporter subunit EIIC 571252 frwC 12760036 frwC Escherichia coli KO11FL putative PTS system fructose-like transporter subunit EIIC YP_006162856.1 570173 R 595495 CDS YP_006162857.1 386699020 12760037 571561..574062 1 NC_017660.1 COG1925 Phosphotransferase system, HPr-related proteins; fused putative PTS enzymes PtsA: Hpr component/enzyme I component/enzyme IIA component 574062 ptsA 12760037 ptsA Escherichia coli KO11FL fused putative PTS enzymes PtsA: Hpr component/enzyme I component/enzyme IIA component YP_006162857.1 571561 D 595495 CDS YP_006162858.1 386699021 12760038 574074..574736 1 NC_017660.1 COG0176 Transaldolase; fructose-6-phosphate aldolase 574736 fsaB 12760038 fsaB Escherichia coli KO11FL fructose-6-phosphate aldolase YP_006162858.1 574074 D 595495 CDS YP_006162859.1 386699022 12760039 574747..575850 1 NC_017660.1 COG0371 Glycerol dehydrogenase and related enzymes; glycerol dehydrogenase 575850 gldA 12760039 gldA Escherichia coli KO11FL glycerol dehydrogenase YP_006162859.1 574747 D 595495 CDS YP_006162860.1 386699023 12760040 576125..576742 1 NC_017660.1 COG3738 Uncharacterized protein conserved in bacteria; yijF; hypothetical protein 576742 12760040 KO11_02605 Escherichia coli KO11FL hypothetical protein YP_006162860.1 576125 D 595495 CDS YP_006162861.1 386699024 12760041 complement(576769..577674) 1 NC_017660.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; yijE; hypothetical protein 577674 12760041 KO11_02610 Escherichia coli KO11FL hypothetical protein YP_006162861.1 576769 R 595495 CDS YP_006162862.1 386699025 12760042 complement(577768..579948) 1 NC_017660.1 COG0376 Catalase (peroxidase I); catalase/hydroperoxidase HPI(I) 579948 katG 12760042 katG Escherichia coli KO11FL catalase/hydroperoxidase HPI(I) YP_006162862.1 577768 R 595495 CDS YP_006162863.1 386699026 12760043 complement(580277..581167) 1 NC_017660.1 COG0685 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 581167 metF 12760043 metF Escherichia coli KO11FL 5,10-methylenetetrahydrofolate reductase YP_006162863.1 580277 R 595495 CDS YP_006162864.1 386699027 12760044 581243..581377 1 NC_017660.1 hypothetical protein 581377 12760044 KO11_02625 Escherichia coli KO11FL hypothetical protein YP_006162864.1 581243 D 595495 CDS YP_006162865.1 386699028 12760045 complement(581516..583948) 1 NC_017660.1 COG0527 Aspartokinases; bifunctional aspartate kinase II/homoserine dehydrogenase II 583948 metL 12760045 metL Escherichia coli KO11FL bifunctional aspartate kinase II/homoserine dehydrogenase II YP_006162865.1 581516 R 595495 CDS YP_006162866.1 386699029 12760046 complement(583951..585111) 1 NC_017660.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase 585111 metB 12760046 metB Escherichia coli KO11FL cystathionine gamma-synthase YP_006162866.1 583951 R 595495 CDS YP_006162867.1 386699030 12760047 585388..585705 1 NC_017660.1 COG3060 Transcriptional regulator of met regulon; transcriptional repressor protein MetJ 585705 metJ 12760047 metJ Escherichia coli KO11FL transcriptional repressor protein MetJ YP_006162867.1 585388 D 595495 CDS YP_006162868.1 386699031 12760048 585953..586933 1 NC_017660.1 COG3547 Transposase and inactivated derivatives; putative IS621 transposase 586933 12760048 KO11_02645 Escherichia coli KO11FL putative IS621 transposase YP_006162868.1 585953 D 595495 CDS YP_006162869.1 386699032 12760049 587168..587776 1 NC_017660.1 yiiX; hypothetical protein 587776 12760049 KO11_02650 Escherichia coli KO11FL hypothetical protein YP_006162869.1 587168 D 595495 CDS YP_006162870.1 386699033 12760050 587921..588193 1 NC_017660.1 COG3677 Transposase and inactivated derivatives; insZ; hypothetical protein 588193 12760050 KO11_02655 Escherichia coli KO11FL hypothetical protein YP_006162870.1 587921 D 595495 CDS YP_006162871.1 386699034 12760051 588220..588405 1 NC_017660.1 COG1662 Transposase and inactivated derivatives, IS1 family; putative transposase 588405 12760051 KO11_02660 Escherichia coli KO11FL putative transposase YP_006162871.1 588220 D 595495 CDS YP_006162872.1 386699035 12760052 588399..588713 1 NC_017660.1 COG1662 Transposase and inactivated derivatives, IS1 family; iso-IS1 InsB protein, putative transposase 588713 insY 12760052 insY Escherichia coli KO11FL iso-IS1 InsB protein, putative transposase YP_006162872.1 588399 D 595495 CDS YP_006162873.1 386699036 12760053 complement(589008..593180) 1 NC_017660.1 COG3209 Rhs family protein; RhsE core protein 593180 rhsW7 12760053 rhsW7 Escherichia coli KO11FL RhsE core protein YP_006162873.1 589008 R 595495 CDS YP_006162874.1 386699037 12760054 complement(593340..593552) 1 NC_017660.1 COG0254 Ribosomal protein L31; 50S ribosomal protein L31 593552 rpmE 12760054 rpmE Escherichia coli KO11FL 50S ribosomal protein L31 YP_006162874.1 593340 R 595495 CDS YP_006162875.1 386699038 12760055 593755..595953 1 NC_017660.1 COG1198 Primosomal protein N (replication factor Y) - superfamily II helicase; primosome assembly protein PriA 595953 priA 12760055 priA Escherichia coli KO11FL primosome assembly protein PriA YP_006162875.1 593755 D 595495 CDS YP_006162876.1 386699039 12760056 596109..597134 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional regulator CytR 597134 cytR 12760056 cytR Escherichia coli KO11FL DNA-binding transcriptional regulator CytR YP_006162876.1 596109 D 595495 CDS YP_006162877.1 386699040 12760057 597226..598185 1 NC_017660.1 COG3087 Cell division protein; cell division protein FtsN 598185 ftsN 12760057 ftsN Escherichia coli KO11FL cell division protein FtsN YP_006162877.1 597226 D 595495 CDS YP_006162878.1 386699041 12760058 598278..598808 1 NC_017660.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 598808 hslV 12760058 hslV Escherichia coli KO11FL ATP-dependent protease subunit HslV YP_006162878.1 598278 D 595495 CDS YP_006162879.1 386699042 12760059 598818..600149 1 NC_017660.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 600149 hslU 12760059 hslU Escherichia coli KO11FL ATP-dependent protease ATP-binding subunit HslU YP_006162879.1 598818 D 595495 CDS YP_006162880.1 386699043 12760060 600204..601142 1 NC_017660.1 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 601142 menA 12760060 menA Escherichia coli KO11FL 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_006162880.1 600204 D 595495 CDS YP_006162881.1 386699044 12760061 601235..601720 1 NC_017660.1 COG0684 Demethylmenaquinone methyltransferase; ribonuclease activity regulator protein RraA 601720 rraA 12760061 rraA Escherichia coli KO11FL ribonuclease activity regulator protein RraA YP_006162881.1 601235 D 595495 CDS YP_006162882.1 386699045 12760062 complement(601805..602044) 1 NC_017660.1 COG3074 Uncharacterized protein conserved in bacteria; septal ring assembly protein ZapB 602044 zapB 12760062 zapB Escherichia coli KO11FL septal ring assembly protein ZapB YP_006162882.1 601805 R 595495 CDS YP_006162883.1 386699046 12760063 602475..603320 1 NC_017660.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); glycerol uptake facilitator protein 603320 glpF 12760063 glpF Escherichia coli KO11FL glycerol uptake facilitator protein YP_006162883.1 602475 D 595495 CDS YP_006162884.1 386699047 12760064 603343..604851 1 NC_017660.1 COG0554 Glycerol kinase; glycerol kinase 604851 glpK 12760064 glpK Escherichia coli KO11FL glycerol kinase YP_006162884.1 603343 D 595495 CDS YP_006162885.1 386699048 12760065 604987..605997 1 NC_017660.1 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins; fructose 1,6-bisphosphatase II 605997 glpX 12760065 glpX Escherichia coli KO11FL fructose 1,6-bisphosphatase II YP_006162885.1 604987 D 595495 CDS YP_006162886.1 386699049 12760066 606094..606840 1 NC_017660.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; ferredoxin-NADP reductase 606840 fpr 12760066 fpr Escherichia coli KO11FL ferredoxin-NADP reductase YP_006162886.1 606094 D 595495 CDS YP_006162887.1 386699050 12760067 complement(606845..607273) 1 NC_017660.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspD 607273 uspD 12760067 uspD Escherichia coli KO11FL universal stress protein UspD YP_006162887.1 606845 R 595495 CDS YP_006162888.1 386699051 12760068 complement(607300..607599) 1 NC_017660.1 COG3691 Uncharacterized protein conserved in bacteria; yiiS; hypothetical protein 607599 12760068 KO11_02745 Escherichia coli KO11FL hypothetical protein YP_006162888.1 607300 R 595495 CDS YP_006162889.1 386699052 12760069 complement(607811..608251) 1 NC_017660.1 COG3152 Predicted membrane protein; yiiR; hypothetical protein 608251 12760069 KO11_02750 Escherichia coli KO11FL hypothetical protein YP_006162889.1 607811 R 595495 CDS YP_006162890.1 386699053 12760070 608352..608951 1 NC_017660.1 yiiQ; hypothetical protein 608951 12760070 KO11_02755 Escherichia coli KO11FL hypothetical protein YP_006162890.1 608352 D 595495 CDS YP_006162891.1 386699054 12760071 609059..609826 1 NC_017660.1 COG0149 Triosephosphate isomerase; triosephosphate isomerase 609826 tpiA 12760071 tpiA Escherichia coli KO11FL triosephosphate isomerase YP_006162891.1 609059 D 595495 CDS YP_006162892.1 386699055 12760072 complement(609881..610636) 1 NC_017660.1 COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase 610636 cdh 12760072 cdh Escherichia coli KO11FL CDP-diacylglycerol pyrophosphatase YP_006162892.1 609881 R 595495 CDS YP_006162893.1 386699056 12760073 complement(610743..611732) 1 NC_017660.1 COG1613 ABC-type sulfate transport system, periplasmic component; sulfate transporter subunit 611732 sbp 12760073 sbp Escherichia coli KO11FL sulfate transporter subunit YP_006162893.1 610743 R 595495 CDS YP_006162894.1 386699057 12760074 complement(612052..613014) 1 NC_017660.1 COG0205 6-phosphofructokinase; 6-phosphofructokinase 613014 pfkA 12760074 pfkA Escherichia coli KO11FL 6-phosphofructokinase YP_006162894.1 612052 R 595495 CDS YP_006162895.1 386699058 12760075 complement(613195..614097) 1 NC_017660.1 COG0053 Predicted Co/Zn/Cd cation transporters; ferrous iron efflux protein F 614097 fieF 12760075 fieF Escherichia coli KO11FL ferrous iron efflux protein F YP_006162895.1 613195 R 595495 CDS YP_006162896.1 386699059 12760076 complement(614334..614588) 1 NC_017660.1 DNA-binding transcriptional regulator 614588 ogr-1 12760076 ogr-1 Escherichia coli KO11FL DNA-binding transcriptional regulator YP_006162896.1 614334 R 595495 CDS YP_006162897.1 386699060 12760077 complement(614634..615797) 1 NC_017660.1 COG3500 Phage protein D; phage protein D 615797 gpD1 12760077 gpD1 Escherichia coli KO11FL phage protein D YP_006162897.1 614634 R 595495 CDS YP_006162898.1 386699061 12760078 complement(615797..616276) 1 NC_017660.1 COG3499 Phage protein U; tail assembly protein (GpU) 616276 gpU-1 12760078 gpU-1 Escherichia coli KO11FL tail assembly protein (GpU) YP_006162898.1 615797 R 595495 CDS YP_006162899.1 386699062 12760079 complement(616291..618738) 1 NC_017660.1 COG5283 Phage-related tail protein; tail fiber protein T (tape measure) (GpT) 618738 12760079 KO11_02800 Escherichia coli KO11FL tail fiber protein T (tape measure) (GpT) YP_006162899.1 616291 R 595495 CDS YP_006162900.1 386699063 12760080 complement(618731..618850) 1 NC_017660.1 putative prophage tail protein 618850 gpE'1 12760080 gpE'1 Escherichia coli KO11FL putative prophage tail protein YP_006162900.1 618731 R 595495 CDS YP_006162901.1 386699064 12760081 complement(618883..619158) 1 NC_017660.1 hypothetical protein 619158 12760081 KO11_02810 Escherichia coli KO11FL hypothetical protein YP_006162901.1 618883 R 595495 CDS YP_006162902.1 386699065 12760082 complement(619215..619733) 1 NC_017660.1 COG3498 Phage tail tube protein FII; major tail tube protein 619733 gpFII-1 12760082 gpFII-1 Escherichia coli KO11FL major tail tube protein YP_006162902.1 619215 R 595495 CDS YP_006162903.1 386699066 12760083 complement(619746..620936) 1 NC_017660.1 COG3497 Phage tail sheath protein FI; Major tail sheath protein (Protein FI) 620936 gpFI-1 12760083 gpFI-1 Escherichia coli KO11FL Major tail sheath protein (Protein FI) YP_006162903.1 619746 R 595495 CDS YP_006162904.1 386699067 12760084 complement(621256..622155) 1 NC_017660.1 hypothetical protein 622155 12760084 KO11_02825 Escherichia coli KO11FL hypothetical protein YP_006162904.1 621256 R 595495 CDS YP_006162905.1 386699068 12760085 complement(622371..622898) 1 NC_017660.1 putative phage tail fiber assembly protein (GpG) 622898 12760085 KO11_02830 Escherichia coli KO11FL putative phage tail fiber assembly protein (GpG) YP_006162905.1 622371 R 595495 CDS YP_006162906.1 386699069 12760086 complement(622902..624911) 1 NC_017660.1 COG5301 Phage-related tail fibre protein; putative tail fiber protein 624911 12760086 KO11_02835 Escherichia coli KO11FL putative tail fiber protein YP_006162906.1 622902 R 595495 CDS YP_006162907.1 386699070 12760087 complement(624922..625452) 1 NC_017660.1 COG4385 Bacteriophage P2-related tail formation protein; Tail protein I (GpI) 625452 12760087 KO11_02840 Escherichia coli KO11FL Tail protein I (GpI) YP_006162907.1 624922 R 595495 CDS YP_006162908.1 386699071 12760088 complement(625445..626353) 1 NC_017660.1 COG3948 Phage-related baseplate assembly protein; putative baseplate assembly protein 626353 12760088 KO11_02845 Escherichia coli KO11FL putative baseplate assembly protein YP_006162908.1 625445 R 595495 CDS YP_006162909.1 386699072 12760089 complement(626358..626705) 1 NC_017660.1 COG3628 Phage baseplate assembly protein W; Baseplate assembly protein W (GpW) 626705 12760089 KO11_02850 Escherichia coli KO11FL Baseplate assembly protein W (GpW) YP_006162909.1 626358 R 595495 CDS YP_006162910.1 386699073 12760090 complement(626702..627337) 1 NC_017660.1 COG4540 Phage P2 baseplate assembly protein gpV; phage baseplate protein 627337 12760090 KO11_02855 Escherichia coli KO11FL phage baseplate protein YP_006162910.1 626702 R 595495 CDS YP_006162911.1 386699074 12760091 complement(627404..627856) 1 NC_017660.1 putative tail protein 627856 12760091 KO11_02860 Escherichia coli KO11FL putative tail protein YP_006162911.1 627404 R 595495 CDS YP_006162912.1 386699075 12760092 complement(627849..628316) 1 NC_017660.1 Tail completion protein R (GpR) 628316 12760092 KO11_02865 Escherichia coli KO11FL Tail completion protein R (GpR) YP_006162912.1 627849 R 595495 CDS YP_006162913.1 386699076 12760093 complement(628279..628437) 1 NC_017660.1 phage lysis protein LysC 628437 12760093 KO11_02870 Escherichia coli KO11FL phage lysis protein LysC YP_006162913.1 628279 R 595495 CDS YP_006162914.1 386699077 12760094 complement(628424..628849) 1 NC_017660.1 LysB protein 628849 12760094 KO11_02875 Escherichia coli KO11FL LysB protein YP_006162914.1 628424 R 595495 CDS YP_006162915.1 386699078 12760095 complement(628837..629262) 1 NC_017660.1 phage lysis protein LysA 629262 12760095 KO11_02880 Escherichia coli KO11FL phage lysis protein LysA YP_006162915.1 628837 R 595495 CDS YP_006162916.1 386699079 12760096 complement(629277..629774) 1 NC_017660.1 COG4678 Muramidase (phage lambda lysozyme); phage lysozyme 629774 12760096 KO11_02885 Escherichia coli KO11FL phage lysozyme YP_006162916.1 629277 R 595495 CDS YP_006162917.1 386699080 12760097 complement(629774..630055) 1 NC_017660.1 hypothetical protein 630055 12760097 KO11_02890 Escherichia coli KO11FL hypothetical protein YP_006162917.1 629774 R 595495 CDS YP_006162918.1 386699081 12760098 complement(630059..630262) 1 NC_017660.1 COG5004 P2-like prophage tail protein X; Tail protein X (GpX) 630262 12760098 KO11_02895 Escherichia coli KO11FL Tail protein X (GpX) YP_006162918.1 630059 R 595495 CDS YP_006162919.1 386699082 12760099 complement(630262..630768) 1 NC_017660.1 Head completion/stabilization protein (GpL) 630768 12760099 KO11_02900 Escherichia coli KO11FL Head completion/stabilization protein (GpL) YP_006162919.1 630262 R 595495 CDS YP_006162920.1 386699083 12760100 complement(630871..631614) 1 NC_017660.1 small terminase subunit 631614 12760100 KO11_02905 Escherichia coli KO11FL small terminase subunit YP_006162920.1 630871 R 595495 CDS YP_006162921.1 386699084 12760101 complement(631618..632691) 1 NC_017660.1 phage major capsid protein, P2 family 632691 12760101 KO11_02915 Escherichia coli KO11FL phage major capsid protein, P2 family YP_006162921.1 631618 R 595495 CDS YP_006162922.1 386699085 12760102 complement(632750..633604) 1 NC_017660.1 putative capsid scaffolding protein (GpO) from prophage P2 633604 12760102 KO11_02920 Escherichia coli KO11FL putative capsid scaffolding protein (GpO) from prophage P2 YP_006162922.1 632750 R 595495 CDS YP_006162923.1 386699086 12760103 633778..635550 1 NC_017660.1 Terminase, ATPase subunit (GpP) 635550 12760103 KO11_02925 Escherichia coli KO11FL Terminase, ATPase subunit (GpP) YP_006162923.1 633778 D 595495 CDS YP_006162924.1 386699087 12760104 635550..636584 1 NC_017660.1 COG5518 Bacteriophage capsid portal protein; phage capsid protein 636584 12760104 KO11_02930 Escherichia coli KO11FL phage capsid protein YP_006162924.1 635550 D 595495 CDS YP_006162925.1 386699088 12760105 637000..638073 1 NC_017660.1 COG1475 Predicted transcriptional regulators; hypothetical protein 638073 12760105 KO11_02935 Escherichia coli KO11FL hypothetical protein YP_006162925.1 637000 D 595495 CDS YP_006162926.1 386699089 12760106 638066..639103 1 NC_017660.1 hypothetical protein 639103 12760106 KO11_02940 Escherichia coli KO11FL hypothetical protein YP_006162926.1 638066 D 595495 CDS YP_006162927.1 386699090 12760107 complement(639100..640038) 1 NC_017660.1 COG0270 Site-specific DNA methylase; HsdRM 640038 12760107 KO11_02945 Escherichia coli KO11FL HsdRM YP_006162927.1 639100 R 595495 CDS YP_006162928.1 386699091 12760108 640323..640415 1 NC_017660.1 hypothetical protein 640415 12760108 KO11_02950 Escherichia coli KO11FL hypothetical protein YP_006162928.1 640323 D 595495 CDS YP_006162929.1 386699092 12760109 complement(640487..640939) 1 NC_017660.1 hypothetical protein 640939 12760109 KO11_02955 Escherichia coli KO11FL hypothetical protein YP_006162929.1 640487 R 595495 CDS YP_006162930.1 386699093 12760110 complement(640939..643224) 1 NC_017660.1 COG0643 Chemotaxis protein histidine kinase and related kinases; Phage protein A 643224 12760110 KO11_02960 Escherichia coli KO11FL Phage protein A YP_006162930.1 640939 R 595495 CDS YP_006162931.1 386699094 12760111 complement(643214..643489) 1 NC_017660.1 hypothetical protein 643489 12760111 KO11_02965 Escherichia coli KO11FL hypothetical protein YP_006162931.1 643214 R 595495 CDS YP_006162932.1 386699095 12760112 complement(643486..643710) 1 NC_017660.1 hypothetical protein 643710 12760112 KO11_02970 Escherichia coli KO11FL hypothetical protein YP_006162932.1 643486 R 595495 CDS YP_006162933.1 386699096 12760113 complement(643710..644012) 1 NC_017660.1 hypothetical protein 644012 12760113 KO11_02975 Escherichia coli KO11FL hypothetical protein YP_006162933.1 643710 R 595495 CDS YP_006162934.1 386699097 12760114 complement(644012..644236) 1 NC_017660.1 hypothetical protein 644236 12760114 KO11_02980 Escherichia coli KO11FL hypothetical protein YP_006162934.1 644012 R 595495 CDS YP_006162935.1 386699098 12760115 complement(644300..644800) 1 NC_017660.1 hypothetical protein 644800 12760115 KO11_02985 Escherichia coli KO11FL hypothetical protein YP_006162935.1 644300 R 595495 CDS YP_006162936.1 386699099 12760116 complement(644797..644967) 1 NC_017660.1 hypothetical protein 644967 12760116 KO11_02990 Escherichia coli KO11FL hypothetical protein YP_006162936.1 644797 R 595495 CDS YP_006162937.1 386699100 12760117 complement(644970..645242) 1 NC_017660.1 Cox protein 645242 12760117 KO11_02995 Escherichia coli KO11FL Cox protein YP_006162937.1 644970 R 595495 CDS YP_006162938.1 386699101 12760118 645395..645688 1 NC_017660.1 COG1396 Predicted transcriptional regulators; putative repressor protein C 645688 12760118 KO11_03000 Escherichia coli KO11FL putative repressor protein C YP_006162938.1 645395 D 595495 CDS YP_006162939.1 386699102 12760119 645758..646738 1 NC_017660.1 COG0582 Integrase; site-specific recombinase, phage integrase family protein 646738 int2 12760119 int2 Escherichia coli KO11FL site-specific recombinase, phage integrase family protein YP_006162939.1 645758 D 595495 CDS YP_006162940.1 386699103 12760120 complement(646924..647424) 1 NC_017660.1 COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; repressor CpxP 647424 cpxP 12760120 cpxP Escherichia coli KO11FL repressor CpxP YP_006162940.1 646924 R 595495 CDS YP_006162941.1 386699104 12760121 647574..648272 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator CpxR 648272 cpxR 12760121 cpxR Escherichia coli KO11FL DNA-binding transcriptional regulator CpxR YP_006162941.1 647574 D 595495 CDS YP_006162942.1 386699105 12760122 648269..649642 1 NC_017660.1 COG0642 Signal transduction histidine kinase; two-component sensor protein 649642 cpxA 12760122 cpxA Escherichia coli KO11FL two-component sensor protein YP_006162942.1 648269 D 595495 CDS YP_006162943.1 386699106 12760123 complement(649748..650422) 1 NC_017660.1 COG2258 Uncharacterized protein conserved in bacteria; 6-N-hydroxylaminopurine resistance protein 650422 yiiM 12760123 yiiM Escherichia coli KO11FL 6-N-hydroxylaminopurine resistance protein YP_006162943.1 649748 R 595495 CDS YP_006162944.1 386699107 12760124 complement(650571..651554) 1 NC_017660.1 2-keto-3-deoxygluconate permease 651554 kdgT 12760124 kdgT Escherichia coli KO11FL 2-keto-3-deoxygluconate permease YP_006162944.1 650571 R 595495 CDS YP_006162945.1 386699108 12760125 complement(651814..652434) 1 NC_017660.1 COG0605 Superoxide dismutase; superoxide dismutase 652434 sodA 12760125 sodA Escherichia coli KO11FL superoxide dismutase YP_006162945.1 651814 R 595495 CDS YP_006162946.1 386699109 12760126 652719..653753 1 NC_017660.1 rhamnose-proton symporter 653753 rhaT 12760126 rhaT Escherichia coli KO11FL rhamnose-proton symporter YP_006162946.1 652719 D 595495 CDS YP_006162947.1 386699110 12760127 complement(653750..654688) 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional activator RhaR 654688 rhaR 12760127 rhaR Escherichia coli KO11FL transcriptional activator RhaR YP_006162947.1 653750 R 595495 CDS YP_006162948.1 386699111 12760128 complement(654672..655508) 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional activator RhaS 655508 rhaS 12760128 rhaS Escherichia coli KO11FL transcriptional activator RhaS YP_006162948.1 654672 R 595495 CDS YP_006162949.1 386699112 12760129 complement(655568..655717) 1 NC_017660.1 hypothetical protein 655717 12760129 KO11_03055 Escherichia coli KO11FL hypothetical protein YP_006162949.1 655568 R 595495 CDS YP_006162950.1 386699113 12760130 655796..657265 1 NC_017660.1 COG1070 Sugar (pentulose and hexulose) kinases; rhamnulokinase 657265 rhaB 12760130 rhaB Escherichia coli KO11FL rhamnulokinase YP_006162950.1 655796 D 595495 CDS YP_006162951.1 386699114 12760131 657262..658521 1 NC_017660.1 COG4806 L-rhamnose isomerase; L-rhamnose isomerase 658521 rhaA 12760131 rhaA Escherichia coli KO11FL L-rhamnose isomerase YP_006162951.1 657262 D 595495 CDS YP_006162952.1 386699115 12760132 658763..659587 1 NC_017660.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; rhamnulose-1-phosphate aldolase 659587 rhaD 12760132 rhaD Escherichia coli KO11FL rhamnulose-1-phosphate aldolase YP_006162952.1 658763 D 595495 CDS YP_006162953.1 386699116 12760133 659597..659911 1 NC_017660.1 COG3254 Uncharacterized conserved protein; L-rhamnose mutarotase 659911 rhaM 12760133 rhaM Escherichia coli KO11FL L-rhamnose mutarotase YP_006162953.1 659597 D 595495 CDS YP_006162954.1 386699117 12760134 660212..660658 1 NC_017660.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); putative fructose-like phosphotransferase system subunit EIIA 660658 frvA 12760134 frvA Escherichia coli KO11FL putative fructose-like phosphotransferase system subunit EIIA YP_006162954.1 660212 D 595495 CDS YP_006162955.1 386699118 12760135 660669..662120 1 NC_017660.1 COG1445 Phosphotransferase system fructose-specific component IIB; putative PTS system transporter subunits IIBC 662120 frvB 12760135 frvB Escherichia coli KO11FL putative PTS system transporter subunits IIBC YP_006162955.1 660669 D 595495 CDS YP_006162956.1 386699119 12760136 662110..663180 1 NC_017660.1 COG1363 Cellulase M and related proteins; putative peptidase 663180 frvX 12760136 frvX Escherichia coli KO11FL putative peptidase YP_006162956.1 662110 D 595495 CDS YP_006162957.1 386699120 12760137 663180..664928 1 NC_017660.1 COG3711 Transcriptional antiterminator; putative frv operon regulatory protein 664928 frvR 12760137 frvR Escherichia coli KO11FL putative frv operon regulatory protein YP_006162957.1 663180 D 595495 CDS YP_006162958.1 386699121 12760138 complement(664978..666018) 1 NC_017660.1 yiiG; hypothetical protein 666018 12760138 KO11_03100 Escherichia coli KO11FL hypothetical protein YP_006162958.1 664978 R 595495 CDS YP_006162959.1 386699122 12760139 complement(666171..667004) 1 NC_017660.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity; formate dehydrogenase accessory protein 667004 fdhD 12760139 fdhD Escherichia coli KO11FL formate dehydrogenase accessory protein YP_006162959.1 666171 R 595495 CDS YP_006162960.1 386699123 12760140 667198..667785 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-O, large subunit 667785 12760140 KO11_03110 Escherichia coli KO11FL formate dehydrogenase-O, large subunit YP_006162960.1 667198 D 595495 CDS YP_006162961.1 386699124 12760141 667834..670248 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-O, major subunit 670248 fdoG 12760141 fdoG Escherichia coli KO11FL formate dehydrogenase-O, major subunit YP_006162961.1 667834 D 595495 CDS YP_006162962.1 386699125 12760142 670261..671163 1 NC_017660.1 COG0437 Fe-S-cluster-containing hydrogenase components 1; formate dehydrogenase-O, iron-sulfur subunit 671163 fdoH 12760142 fdoH Escherichia coli KO11FL formate dehydrogenase-O, iron-sulfur subunit YP_006162962.1 670261 D 595495 CDS YP_006162963.1 386699126 12760143 671160..671795 1 NC_017660.1 COG2864 Cytochrome b subunit of formate dehydrogenase; formate dehydrogenase-O subunit gamma 671795 fdoI 12760143 fdoI Escherichia coli KO11FL formate dehydrogenase-O subunit gamma YP_006162963.1 671160 D 595495 CDS YP_006162964.1 386699127 12760144 671792..672721 1 NC_017660.1 COG3058 Uncharacterized protein involved in formate dehydrogenase formation; formate dehydrogenase accessory protein FdhE 672721 fdhE 12760144 fdhE Escherichia coli KO11FL formate dehydrogenase accessory protein FdhE YP_006162964.1 671792 D 595495 CDS YP_006162965.1 386699128 12760145 complement(673051..673269) 1 NC_017660.1 yiiF; hypothetical protein 673269 12760145 KO11_03135 Escherichia coli KO11FL hypothetical protein YP_006162965.1 673051 R 595495 CDS YP_006162966.1 386699129 12760146 complement(673512..673730) 1 NC_017660.1 COG3905 Predicted transcriptional regulator; putative transcriptional regulator 673730 yiiE 12760146 yiiE Escherichia coli KO11FL putative transcriptional regulator YP_006162966.1 673512 R 595495 CDS YP_006162967.1 386699130 12760147 complement(674157..674249) 1 NC_017660.1 hypothetical protein 674249 12760147 KO11_03145 Escherichia coli KO11FL hypothetical protein YP_006162967.1 674157 R 595495 CDS YP_006162968.1 386699131 12760148 complement(674335..674625) 1 NC_017660.1 COG2944 Predicted transcriptional regulator; hypothetical protein 674625 12760148 KO11_03150 Escherichia coli KO11FL hypothetical protein YP_006162968.1 674335 R 595495 CDS YP_006162969.1 386699132 12760149 complement(674626..674937) 1 NC_017660.1 hypothetical protein 674937 12760149 KO11_03155 Escherichia coli KO11FL hypothetical protein YP_006162969.1 674626 R 595495 CDS YP_006162970.1 386699133 12760150 675166..676074 1 NC_017660.1 COG0657 Esterase/lipase; putative lipase 676074 12760150 KO11_03160 Escherichia coli KO11FL putative lipase YP_006162970.1 675166 D 595495 CDS YP_006162971.1 386699134 12760151 complement(676138..677079) 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase 677079 yiiD 12760151 yiiD Escherichia coli KO11FL putative acetyltransferase YP_006162971.1 676138 R 595495 CDS YP_006162972.1 386699135 12760152 complement(677124..677561) 1 NC_017660.1 COG1490 D-Tyr-tRNAtyr deacylase; D-tyrosyl-tRNA(Tyr) deacylase 677561 dtd 12760152 dtd Escherichia coli KO11FL D-tyrosyl-tRNA(Tyr) deacylase YP_006162972.1 677124 R 595495 CDS YP_006162973.1 386699136 12760153 complement(677558..678430) 1 NC_017660.1 COG1295 Predicted membrane protein; yihY; hypothetical protein 678430 12760153 KO11_03175 Escherichia coli KO11FL hypothetical protein YP_006162973.1 677558 R 595495 CDS YP_006162974.1 386699137 12760154 complement(678424..679023) 1 NC_017660.1 COG1011 Predicted hydrolase (HAD superfamily); D-glucose-1-phosphatase 679023 yihX 12760154 yihX Escherichia coli KO11FL D-glucose-1-phosphatase YP_006162974.1 678424 R 595495 CDS YP_006162975.1 386699138 12760155 complement(679122..679907) 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; putative DNA-binding transcriptional regulator 679907 yihW 12760155 yihW Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006162975.1 679122 R 595495 CDS YP_006162976.1 386699139 12760156 complement(679941..680837) 1 NC_017660.1 COG0524 Sugar kinases, ribokinase family; putative sugar kinase 680837 yihV 12760156 yihV Escherichia coli KO11FL putative sugar kinase YP_006162976.1 679941 R 595495 CDS YP_006162977.1 386699140 12760157 681005..681901 1 NC_017660.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; NADH-dependent gamma-hydroxybutyrate dehydrogenase 681901 yihU 12760157 yihU Escherichia coli KO11FL NADH-dependent gamma-hydroxybutyrate dehydrogenase YP_006162977.1 681005 D 595495 CDS YP_006162978.1 386699141 12760158 681925..682803 1 NC_017660.1 COG3684 Tagatose-1,6-bisphosphate aldolase; putative aldolase 682803 yihT 12760158 yihT Escherichia coli KO11FL putative aldolase YP_006162978.1 681925 D 595495 CDS YP_006162979.1 386699142 12760159 682820..684061 1 NC_017660.1 COG2942 N-acyl-D-glucosamine 2-epimerase; putative glucosamine isomerase 684061 yihS 12760159 yihS Escherichia coli KO11FL putative glucosamine isomerase YP_006162979.1 682820 D 595495 CDS YP_006162980.1 386699143 12760160 684199..685101 1 NC_017660.1 COG2017 Galactose mutarotase and related enzymes; putative aldose-1-epimerase 685101 yihR 12760160 yihR Escherichia coli KO11FL putative aldose-1-epimerase YP_006162980.1 684199 D 595495 CDS YP_006162981.1 386699144 12760161 685300..687336 1 NC_017660.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; alpha-glucosidase 687336 yihQ 12760161 yihQ Escherichia coli KO11FL alpha-glucosidase YP_006162981.1 685300 D 595495 CDS YP_006162982.1 386699145 12760162 687382..688767 1 NC_017660.1 COG2211 Na+/melibiose symporter and related transporters; transporter 688767 yihP 12760162 yihP Escherichia coli KO11FL transporter YP_006162982.1 687382 D 595495 CDS YP_006162983.1 386699146 12760163 688810..690213 1 NC_017660.1 COG2211 Na+/melibiose symporter and related transporters; putative transporter 690213 yihO 12760163 yihO Escherichia coli KO11FL putative transporter YP_006162983.1 688810 D 595495 CDS YP_006162984.1 386699147 12760164 complement(690421..691629) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase IS4 family protein 691629 12760164 KO11_03230 Escherichia coli KO11FL transposase IS4 family protein YP_006162984.1 690421 R 595495 CDS YP_006162985.1 386699148 12760165 691736..692305 1 NC_017660.1 outer membrane porin L 692305 ompL 12760165 ompL Escherichia coli KO11FL outer membrane porin L YP_006162985.1 691736 D 595495 CDS YP_006162986.1 386699149 12760166 692409..693617 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase IS4 family protein 693617 12760166 KO11_03240 Escherichia coli KO11FL transposase IS4 family protein YP_006162986.1 692409 D 595495 CDS YP_006162987.1 386699150 12760167 complement(693596..694171) 1 NC_017660.1 hypothetical protein 694171 12760167 KO11_03245 Escherichia coli KO11FL hypothetical protein YP_006162987.1 693596 R 595495 CDS YP_006162988.1 386699151 12760168 complement(694507..694710) 1 NC_017660.1 COG3311 Predicted transcriptional regulator; phage regulatory protein 694710 12760168 KO11_03250 Escherichia coli KO11FL phage regulatory protein YP_006162988.1 694507 R 595495 CDS YP_006162989.1 386699152 12760169 695091..696239 1 NC_017660.1 hypothetical protein 696239 12760169 KO11_03255 Escherichia coli KO11FL hypothetical protein YP_006162989.1 695091 D 595495 CDS YP_006162990.1 386699153 12760170 696642..696935 1 NC_017660.1 hypothetical protein 696935 12760170 KO11_03260 Escherichia coli KO11FL hypothetical protein YP_006162990.1 696642 D 595495 CDS YP_006162991.1 386699154 12760171 complement(696963..697829) 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; transposase 697829 insF1 12760171 insF1 Escherichia coli KO11FL transposase YP_006162991.1 696963 R 595495 CDS YP_006162992.1 386699155 12760172 complement(697826..698125) 1 NC_017660.1 COG2963 Transposase and inactivated derivatives; transposase for IS3 698125 insE1 12760172 insE1 Escherichia coli KO11FL transposase for IS3 YP_006162992.1 697826 R 595495 CDS YP_006162993.1 386699156 12760173 698357..699160 1 NC_017660.1 hypothetical protein 699160 12760173 KO11_03275 Escherichia coli KO11FL hypothetical protein YP_006162993.1 698357 D 595495 CDS YP_006162994.1 386699157 12760174 699377..699853 1 NC_017660.1 hypothetical protein 699853 12760174 KO11_03280 Escherichia coli KO11FL hypothetical protein YP_006162994.1 699377 D 595495 CDS YP_006162995.1 386699158 12760175 699925..700746 1 NC_017660.1 yafZ; hypothetical protein 700746 12760175 KO11_03285 Escherichia coli KO11FL hypothetical protein YP_006162995.1 699925 D 595495 CDS YP_006162996.1 386699159 12760176 700816..701286 1 NC_017660.1 COG2003 DNA repair proteins; yfjY; hypothetical protein 701286 12760176 KO11_03290 Escherichia coli KO11FL hypothetical protein YP_006162996.1 700816 D 595495 CDS YP_006162997.1 386699160 12760177 701295..701516 1 NC_017660.1 ykfH; hypothetical protein 701516 12760177 KO11_03295 Escherichia coli KO11FL hypothetical protein YP_006162997.1 701295 D 595495 CDS YP_006162998.1 386699161 12760178 701548..701913 1 NC_017660.1 hypothetical protein 701913 12760178 KO11_03300 Escherichia coli KO11FL hypothetical protein YP_006162998.1 701548 D 595495 CDS YP_006162999.1 386699162 12760179 701947..702267 1 NC_017660.1 hypothetical protein 702267 12760179 KO11_03305 Escherichia coli KO11FL hypothetical protein YP_006162999.1 701947 D 595495 CDS YP_006163000.1 386699163 12760180 702503..702652 1 NC_017660.1 COG3943 Virulence protein; hypothetical protein 702652 12760180 KO11_03310 Escherichia coli KO11FL hypothetical protein YP_006163000.1 702503 D 595495 CDS YP_006163001.1 386699164 12760181 703034..704218 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative sugar efflux system 704218 setC 12760181 setC Escherichia coli KO11FL putative sugar efflux system YP_006163001.1 703034 D 595495 CDS YP_006163002.1 386699165 12760182 704329..705252 1 NC_017660.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative inner membrane protein 705252 yicL 12760182 yicL Escherichia coli KO11FL putative inner membrane protein YP_006163002.1 704329 D 595495 CDS YP_006163003.1 386699166 12760183 complement(705256..706074) 1 NC_017660.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; hypothetical protein 706074 nlpA 12760183 nlpA Escherichia coli KO11FL hypothetical protein YP_006163003.1 705256 R 595495 CDS YP_006163004.1 386699167 12760184 706296..706589 1 NC_017660.1 yicS; hypothetical protein 706589 12760184 KO11_03330 Escherichia coli KO11FL hypothetical protein YP_006163004.1 706296 D 595495 CDS YP_006163005.1 386699168 12760185 complement(706630..707985) 1 NC_017660.1 COG2814 Arabinose efflux permease; ribonucleoside transporter 707985 nepI 12760185 nepI Escherichia coli KO11FL ribonucleoside transporter YP_006163005.1 706630 R 595495 CDS YP_006163006.1 386699169 12760186 complement(708031..708483) 1 NC_017660.1 COG0442 Prolyl-tRNA synthetase; yicN; hypothetical protein 708483 12760186 KO11_03340 Escherichia coli KO11FL hypothetical protein YP_006163006.1 708031 R 595495 CDS YP_006163007.1 386699170 12760187 complement(708536..709882) 1 NC_017660.1 COG2252 Permeases; yicO; hypothetical protein 709882 12760187 KO11_03345 Escherichia coli KO11FL hypothetical protein YP_006163007.1 708536 R 595495 CDS YP_006163008.1 386699171 12760188 710045..711811 1 NC_017660.1 COG1001 Adenine deaminase; cryptic adenine deaminase 711811 ade 12760188 ade Escherichia coli KO11FL cryptic adenine deaminase YP_006163008.1 710045 D 595495 CDS YP_006163009.1 386699172 12760189 complement(711856..713247) 1 NC_017660.1 COG2271 Sugar phosphate permease; sugar phosphate antiporter 713247 uhpT 12760189 uhpT Escherichia coli KO11FL sugar phosphate antiporter YP_006163009.1 711856 R 595495 CDS YP_006163010.1 386699173 12760190 complement(713385..714704) 1 NC_017660.1 COG2271 Sugar phosphate permease; regulatory protein UhpC 714704 uhpC 12760190 uhpC Escherichia coli KO11FL regulatory protein UhpC YP_006163010.1 713385 R 595495 CDS YP_006163011.1 386699174 12760839 complement(714714..716216) 1 NC_017660.1 COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific; sensory histidine kinase UhpB 716216 uhpB 12760839 uhpB Escherichia coli KO11FL sensory histidine kinase UhpB YP_006163011.1 714714 R 595495 CDS YP_006163012.1 386699175 12760840 complement(716216..716806) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; DNA-binding transcriptional activator UhpA 716806 uhpA 12760840 uhpA Escherichia coli KO11FL DNA-binding transcriptional activator UhpA YP_006163012.1 716216 R 595495 CDS YP_006163013.1 386699176 12760841 716777..716887 1 NC_017660.1 hypothetical protein 716887 12760841 KO11_03375 Escherichia coli KO11FL hypothetical protein YP_006163013.1 716777 D 595495 CDS YP_006163014.1 386699177 12760842 complement(716881..717171) 1 NC_017660.1 COG0440 Acetolactate synthase, small (regulatory) subunit; acetolactate synthase 1 regulatory subunit 717171 ilvN 12760842 ilvN Escherichia coli KO11FL acetolactate synthase 1 regulatory subunit YP_006163014.1 716881 R 595495 CDS YP_006163015.1 386699178 12760843 complement(717175..718863) 1 NC_017660.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase catalytic subunit 718863 ilvB 12760843 ilvB Escherichia coli KO11FL acetolactate synthase catalytic subunit YP_006163015.1 717175 R 595495 CDS YP_006163016.1 386699179 12760844 complement(718969..719067) 1 NC_017660.1 ilvB operon leader peptide 719067 ivbL 12760844 ivbL Escherichia coli KO11FL ilvB operon leader peptide YP_006163016.1 718969 R 595495 CDS YP_006163017.1 386699180 12760845 720173..721324 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein D 721324 emrD 12760845 emrD Escherichia coli KO11FL multidrug resistance protein D YP_006163017.1 720173 D 595495 CDS YP_006163018.1 386699181 12760846 complement(721332..721829) 1 NC_017660.1 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); putative transcriptional regulator 721829 yidF 12760846 yidF Escherichia coli KO11FL putative transcriptional regulator YP_006163018.1 721332 R 595495 CDS YP_006163019.1 386699182 12760847 complement(721826..722188) 1 NC_017660.1 Inner membrane protein yidG 722188 yidG 12760847 yidG Escherichia coli KO11FL Inner membrane protein yidG YP_006163019.1 721826 R 595495 CDS YP_006163020.1 386699183 12760848 complement(722178..722525) 1 NC_017660.1 COG2149 Predicted membrane protein; inner membrane protein YidH 722525 yidH 12760848 yidH Escherichia coli KO11FL inner membrane protein YidH YP_006163020.1 722178 R 595495 CDS YP_006163021.1 386699184 12760849 722635..723084 1 NC_017660.1 putative inner membrane protein 723084 yidI 12760849 yidI Escherichia coli KO11FL putative inner membrane protein YP_006163021.1 722635 D 595495 CDS YP_006163022.1 386699185 12760850 complement(723131..724624) 1 NC_017660.1 COG3119 Arylsulfatase A and related enzymes; putative sulfatase/phosphatase 724624 yidJ 12760850 yidJ Escherichia coli KO11FL putative sulfatase/phosphatase YP_006163022.1 723131 R 595495 CDS YP_006163023.1 386699186 12760851 complement(724621..726336) 1 NC_017660.1 COG4146 Predicted symporter; putative transporter 726336 yidK 12760851 yidK Escherichia coli KO11FL putative transporter YP_006163023.1 724621 R 595495 CDS YP_006163024.1 386699187 12760852 726503..727396 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator 727396 yidL 12760852 yidL Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163024.1 726503 D 595495 CDS YP_006163025.1 386699188 12760853 complement(727495..727569) 1 NC_017660.1 hypothetical protein 727569 12760853 KO11_03435 Escherichia coli KO11FL hypothetical protein YP_006163025.1 727495 R 595495 CDS YP_006163026.1 386699189 12760854 complement(727569..728207) 1 NC_017660.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; putative 6-phospho-beta-glucosidase, NAD(P)-binding protein 728207 glvG 12760854 glvG Escherichia coli KO11FL putative 6-phospho-beta-glucosidase, NAD(P)-binding protein YP_006163026.1 727569 R 595495 CDS YP_006163027.1 386699190 12760855 complement(728207..729823) 1 NC_017660.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; PTS system arbutin-like IIC component 729823 glvC 12760855 glvC Escherichia coli KO11FL PTS system arbutin-like IIC component YP_006163027.1 728207 R 595495 CDS YP_006163028.1 386699191 12760856 730119..730835 1 NC_017660.1 COG2188 Transcriptional regulators; putative DNA-binding transcriptional regulator 730835 yidP 12760856 yidP Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163028.1 730119 D 595495 CDS YP_006163029.1 386699192 12760857 complement(730832..732493) 1 NC_017660.1 COG2985 Predicted permease; putative transporter 732493 yidE 12760857 yidE Escherichia coli KO11FL putative transporter YP_006163029.1 730832 R 595495 CDS YP_006163030.1 386699193 12760858 732524..732685 1 NC_017660.1 hypothetical protein 732685 12760858 KO11_03460 Escherichia coli KO11FL hypothetical protein YP_006163030.1 732524 D 595495 CDS YP_006163031.1 386699194 12760859 complement(732690..733118) 1 NC_017660.1 COG0071 Molecular chaperone (small heat shock protein); heat shock chaperone IbpB 733118 lbpB 12760859 lbpB Escherichia coli KO11FL heat shock chaperone IbpB YP_006163031.1 732690 R 595495 CDS YP_006163032.1 386699195 12760860 complement(733230..733643) 1 NC_017660.1 COG0071 Molecular chaperone (small heat shock protein); heat shock protein IbpA 733643 lbpA 12760860 lbpA Escherichia coli KO11FL heat shock protein IbpA YP_006163032.1 733230 R 595495 CDS YP_006163033.1 386699196 12760861 734021..734281 1 NC_017660.1 COG5645 Predicted periplasmic lipoprotein; yidQ; hypothetical protein 734281 12760861 KO11_03475 Escherichia coli KO11FL hypothetical protein YP_006163033.1 734021 D 595495 CDS YP_006163034.1 386699197 12760862 complement(734283..735497) 1 NC_017660.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; hypothetical protein 735497 12760862 KO11_03480 Escherichia coli KO11FL hypothetical protein YP_006163034.1 734283 R 595495 CDS YP_006163035.1 386699198 12760863 735598..736662 1 NC_017660.1 COG0644 Dehydrogenases (flavoproteins); putative oxidoreductase 736662 cbrA 12760863 cbrA Escherichia coli KO11FL putative oxidoreductase YP_006163035.1 735598 D 595495 CDS YP_006163036.1 386699199 12760864 complement(736659..737951) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; D-galactonate transporter 737951 dgoT 12760864 dgoT Escherichia coli KO11FL D-galactonate transporter YP_006163036.1 736659 R 595495 CDS YP_006163037.1 386699200 12760865 complement(738071..739219) 1 NC_017660.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; galactonate dehydratase 739219 dgoD 12760865 dgoD Escherichia coli KO11FL galactonate dehydratase YP_006163037.1 738071 R 595495 CDS YP_006163038.1 386699201 12760866 complement(739216..739833) 1 NC_017660.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 739833 dgoA 12760866 dgoA Escherichia coli KO11FL 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_006163038.1 739216 R 595495 CDS YP_006163039.1 386699202 12760867 complement(739817..740695) 1 NC_017660.1 COG3734 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase 740695 dgoK 12760867 dgoK Escherichia coli KO11FL 2-oxo-3-deoxygalactonate kinase YP_006163039.1 739817 R 595495 CDS YP_006163040.1 386699203 12760868 complement(740692..741381) 1 NC_017660.1 COG2186 Transcriptional regulators; putative DNA-binding transcriptional regulator 741381 dgoR 12760868 dgoR Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163040.1 740692 R 595495 CDS YP_006163041.1 386699204 12760869 741659..742315 1 NC_017660.1 yidX; hypothetical protein 742315 12760869 KO11_03515 Escherichia coli KO11FL hypothetical protein YP_006163041.1 741659 D 595495 CDS YP_006163042.1 386699205 12760870 complement(742361..743173) 1 NC_017660.1 COG0561 Predicted hydrolases of the HAD superfamily; sugar phosphate phosphatase 743173 yidA 12760870 yidA Escherichia coli KO11FL sugar phosphate phosphatase YP_006163042.1 742361 R 595495 CDS YP_006163043.1 386699206 12760871 complement(743288..743686) 1 NC_017660.1 COG3753 Uncharacterized protein conserved in bacteria; yidB; hypothetical protein 743686 12760871 KO11_03525 Escherichia coli KO11FL hypothetical protein YP_006163043.1 743288 R 595495 CDS YP_006163044.1 386699207 12760872 complement(743926..746340) 1 NC_017660.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 746340 gyrB 12760872 gyrB Escherichia coli KO11FL DNA gyrase subunit B YP_006163044.1 743926 R 595495 CDS YP_006163045.1 386699208 12760873 complement(746369..747442) 1 NC_017660.1 COG1195 Recombinational DNA repair ATPase (RecF pathway); recombination protein F 747442 recF 12760873 recF Escherichia coli KO11FL recombination protein F YP_006163045.1 746369 R 595495 CDS YP_006163046.1 386699209 12760874 complement(747442..748542) 1 NC_017660.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 748542 dnaN 12760874 dnaN Escherichia coli KO11FL DNA polymerase III subunit beta YP_006163046.1 747442 R 595495 CDS YP_006163047.1 386699210 12760875 complement(748547..749950) 1 NC_017660.1 COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein 749950 dnaA 12760875 dnaA Escherichia coli KO11FL chromosomal replication initiation protein YP_006163047.1 748547 R 595495 CDS YP_006163048.1 386699211 12760876 750557..750697 1 NC_017660.1 COG0230 Ribosomal protein L34; 50S ribosomal protein L34 750697 rpmH 12760876 rpmH Escherichia coli KO11FL 50S ribosomal protein L34 YP_006163048.1 750557 D 595495 CDS YP_006163049.1 386699212 12760877 750747..751073 1 NC_017660.1 COG0594 RNase P protein component; ribonuclease P 751073 rnpA 12760877 rnpA Escherichia coli KO11FL ribonuclease P YP_006163049.1 750747 D 595495 CDS YP_006163050.1 386699213 12760878 751037..751294 1 NC_017660.1 COG0759 Uncharacterized conserved protein; yidD; hypothetical protein 751294 12760878 KO11_03560 Escherichia coli KO11FL hypothetical protein YP_006163050.1 751037 D 595495 CDS YP_006163051.1 386699214 12760879 751297..752943 1 NC_017660.1 COG0706 Preprotein translocase subunit YidC; membrane protein insertase 752943 yidC 12760879 yidC Escherichia coli KO11FL membrane protein insertase YP_006163051.1 751297 D 595495 CDS YP_006163052.1 386699215 12760880 753049..754413 1 NC_017660.1 COG0486 Predicted GTPase; tRNA modification GTPase MnmE 754413 mnmE 12760880 mnmE Escherichia coli KO11FL tRNA modification GTPase MnmE YP_006163052.1 753049 D 595495 CDS YP_006163053.1 386699216 12760881 754656..754730 1 NC_017660.1 tryptophanase leader peptide 754730 tnaC 12760881 tnaC Escherichia coli KO11FL tryptophanase leader peptide YP_006163053.1 754656 D 595495 CDS YP_006163054.1 386699217 12760882 754951..756366 1 NC_017660.1 COG3033 Tryptophanase; tryptophanase/L-cysteine desulfhydrase, PLP-dependent 756366 tnaA 12760882 tnaA Escherichia coli KO11FL tryptophanase/L-cysteine desulfhydrase, PLP-dependent YP_006163054.1 754951 D 595495 CDS YP_006163055.1 386699218 12760883 756457..757704 1 NC_017660.1 COG0814 Amino acid permeases; tryptophan permease TnaB 757704 tnaB 12760883 tnaB Escherichia coli KO11FL tryptophan permease TnaB YP_006163055.1 756457 D 595495 CDS YP_006163056.1 386699219 12760884 757836..758432 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; multidrug efflux system protein MdtL 758432 mdtL_1 12760884 mdtL_1 Escherichia coli KO11FL multidrug efflux system protein MdtL YP_006163056.1 757836 D 595495 CDS YP_006163057.1 386699220 12760885 complement(758401..759339) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase, IS4 family, IS10 759339 12760885 KO11_03590 Escherichia coli KO11FL transposase, IS4 family, IS10 YP_006163057.1 758401 R 595495 CDS YP_006163058.1 386699221 12760886 759862..760350 1 NC_017660.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; multidrug efflux system protein MdtL 760350 mdtL_2 12760886 mdtL_2 Escherichia coli KO11FL multidrug efflux system protein MdtL YP_006163058.1 759862 D 595495 CDS YP_006163059.1 386699222 12760887 760325..761284 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional regulator YidZ 761284 yidZ 12760887 yidZ Escherichia coli KO11FL DNA-binding transcriptional regulator YidZ YP_006163059.1 760325 D 595495 CDS YP_006163060.1 386699223 12760888 761441..762190 1 NC_017660.1 COG2091 Phosphopantetheinyl transferase; putative phosphopantetheinyl transferase 762190 yieE 12760888 yieE Escherichia coli KO11FL putative phosphopantetheinyl transferase YP_006163060.1 761441 D 595495 CDS YP_006163061.1 386699224 12760889 762212..762778 1 NC_017660.1 COG0431 Predicted flavoprotein; yieF; hypothetical protein 762778 12760889 KO11_03610 Escherichia coli KO11FL hypothetical protein YP_006163061.1 762212 D 595495 CDS YP_006163062.1 386699225 12760890 complement(762832..764169) 1 NC_017660.1 COG2252 Permeases; putative inner membrane protein 764169 yieG 12760890 yieG Escherichia coli KO11FL putative inner membrane protein YP_006163062.1 762832 R 595495 CDS YP_006163063.1 386699226 12760891 764336..765001 1 NC_017660.1 COG0637 Predicted phosphatase/phosphohexomutase; 6-phosphogluconate phosphatase 765001 yieH 12760891 yieH Escherichia coli KO11FL 6-phosphogluconate phosphatase YP_006163063.1 764336 D 595495 CDS YP_006163064.1 386699227 12760892 765068..765541 1 NC_017660.1 putative inner membrane protein 765541 cbrB 12760892 cbrB Escherichia coli KO11FL putative inner membrane protein YP_006163064.1 765068 D 595495 CDS YP_006163065.1 386699228 12760893 765590..766177 1 NC_017660.1 COG3196 Uncharacterized protein conserved in bacteria; cbrC; hypothetical protein 766177 12760893 KO11_03630 Escherichia coli KO11FL hypothetical protein YP_006163065.1 765590 D 595495 CDS YP_006163066.1 386699229 12760894 complement(766239..766961) 1 NC_017660.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; putative 6-phosphogluconolactonase 766961 yieK 12760894 yieK Escherichia coli KO11FL putative 6-phosphogluconolactonase YP_006163066.1 766239 R 595495 CDS YP_006163067.1 386699230 12760895 complement(766976..768145) 1 NC_017660.1 COG0296 1,4-alpha-glucan branching enzyme; putative xylanase 768145 yieL 12760895 yieL Escherichia coli KO11FL putative xylanase YP_006163067.1 766976 R 595495 CDS YP_006163068.1 386699231 12760896 complement(768172..769788) 1 NC_017660.1 COG4580 Maltoporin (phage lambda and maltose receptor); carbohydrate-specific outer membrane porin, cryptic 769788 bglH 12760896 bglH Escherichia coli KO11FL carbohydrate-specific outer membrane porin, cryptic YP_006163068.1 768172 R 595495 CDS YP_006163069.1 386699232 12760897 complement(769874..771268) 1 NC_017660.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; cryptic phospho-beta-glucosidase B 771268 bglB 12760897 bglB Escherichia coli KO11FL cryptic phospho-beta-glucosidase B YP_006163069.1 769874 R 595495 CDS YP_006163070.1 386699233 12760898 complement(771287..773164) 1 NC_017660.1 COG1264 Phosphotransferase system IIB components; PTS system beta-glucoside-specific transporter subunit IIABC 773164 bglF 12760898 bglF Escherichia coli KO11FL PTS system beta-glucoside-specific transporter subunit IIABC YP_006163070.1 771287 R 595495 CDS YP_006163071.1 386699234 12760899 complement(773298..774134) 1 NC_017660.1 COG3711 Transcriptional antiterminator; transcriptional antiterminator BglG 774134 bglG 12760899 bglG Escherichia coli KO11FL transcriptional antiterminator BglG YP_006163071.1 773298 R 595495 CDS YP_006163072.1 386699235 12760900 complement(774420..775145) 1 NC_017660.1 COG0704 Phosphate uptake regulator; transcriptional regulator PhoU 775145 phoU 12760900 phoU Escherichia coli KO11FL transcriptional regulator PhoU YP_006163072.1 774420 R 595495 CDS YP_006163073.1 386699236 12760901 complement(775160..775933) 1 NC_017660.1 COG1117 ABC-type phosphate transport system, ATPase component; phosphate transporter ATP-binding protein 775933 pstB 12760901 pstB Escherichia coli KO11FL phosphate transporter ATP-binding protein YP_006163073.1 775160 R 595495 CDS YP_006163074.1 386699237 12760902 complement(776024..776914) 1 NC_017660.1 COG0581 ABC-type phosphate transport system, permease component; phosphate transporter permease subunit PtsA 776914 pstA 12760902 pstA Escherichia coli KO11FL phosphate transporter permease subunit PtsA YP_006163074.1 776024 R 595495 CDS YP_006163075.1 386699238 12760903 complement(776914..777873) 1 NC_017660.1 COG0573 ABC-type phosphate transport system, permease component; phosphate transporter permease subunit PstC 777873 pstC 12760903 pstC Escherichia coli KO11FL phosphate transporter permease subunit PstC YP_006163075.1 776914 R 595495 CDS YP_006163076.1 386699239 12760904 complement(777960..779000) 1 NC_017660.1 COG0226 ABC-type phosphate transport system, periplasmic component; phosphate ABC transporter substrate-binding protein 779000 pstS 12760904 pstS Escherichia coli KO11FL phosphate ABC transporter substrate-binding protein YP_006163076.1 777960 R 595495 CDS YP_006163077.1 386699240 12760905 complement(779248..780321) 1 NC_017660.1 putative fimbrial protein LpfD, putative adhesin 780321 lpfD 12760905 lpfD Escherichia coli KO11FL putative fimbrial protein LpfD, putative adhesin YP_006163077.1 779248 R 595495 CDS YP_006163078.1 386699241 12760906 complement(780332..782854) 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; putative outer membrane usher protein 782854 lpfC 12760906 lpfC Escherichia coli KO11FL putative outer membrane usher protein YP_006163078.1 780332 R 595495 CDS YP_006163079.1 386699242 12760907 complement(782879..783610) 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein 783610 lpfB 12760907 lpfB Escherichia coli KO11FL fimbrial chaperone protein YP_006163079.1 782879 R 595495 CDS YP_006163080.1 386699243 12760908 complement(783658..784230) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; fimbrial protein 784230 lpfA 12760908 lpfA Escherichia coli KO11FL fimbrial protein YP_006163080.1 783658 R 595495 CDS YP_006163081.1 386699244 12760909 complement(784532..786361) 1 NC_017660.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 786361 glmS 12760909 glmS Escherichia coli KO11FL glucosamine--fructose-6-phosphate aminotransferase YP_006163081.1 784532 R 595495 CDS YP_006163082.1 386699245 12760910 complement(786523..787893) 1 NC_017660.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 787893 glmU 12760910 glmU Escherichia coli KO11FL bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_006163082.1 786523 R 595495 CDS YP_006163083.1 386699246 12760911 complement(788244..788657) 1 NC_017660.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon 788657 atpC 12760911 atpC Escherichia coli KO11FL F0F1 ATP synthase subunit epsilon YP_006163083.1 788244 R 595495 CDS YP_006163084.1 386699247 12760912 complement(788684..790066) 1 NC_017660.1 COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta 790066 atpD 12760912 atpD Escherichia coli KO11FL F0F1 ATP synthase subunit beta YP_006163084.1 788684 R 595495 CDS YP_006163085.1 386699248 12760913 complement(790093..790956) 1 NC_017660.1 COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma 790956 atpG 12760913 atpG Escherichia coli KO11FL F0F1 ATP synthase subunit gamma YP_006163085.1 790093 R 595495 CDS YP_006163086.1 386699249 12760914 complement(791007..792548) 1 NC_017660.1 COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha 792548 atpA 12760914 atpA Escherichia coli KO11FL F0F1 ATP synthase subunit alpha YP_006163086.1 791007 R 595495 CDS YP_006163087.1 386699250 12760915 complement(792561..793094) 1 NC_017660.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein); F0F1 ATP synthase subunit delta 793094 atpH 12760915 atpH Escherichia coli KO11FL F0F1 ATP synthase subunit delta YP_006163087.1 792561 R 595495 CDS YP_006163088.1 386699251 12760916 complement(793109..793579) 1 NC_017660.1 COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B 793579 atpF 12760916 atpF Escherichia coli KO11FL F0F1 ATP synthase subunit B YP_006163088.1 793109 R 595495 CDS YP_006163089.1 386699252 12760917 complement(793641..793880) 1 NC_017660.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C 793880 atpE 12760917 atpE Escherichia coli KO11FL F0F1 ATP synthase subunit C YP_006163089.1 793641 R 595495 CDS YP_006163090.1 386699253 12760918 complement(793927..794742) 1 NC_017660.1 COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A 794742 atpB 12760918 atpB Escherichia coli KO11FL F0F1 ATP synthase subunit A YP_006163090.1 793927 R 595495 CDS YP_006163091.1 386699254 12760919 complement(794751..795131) 1 NC_017660.1 F0F1 ATP synthase subunit I 795131 atpI 12760919 atpI Escherichia coli KO11FL F0F1 ATP synthase subunit I YP_006163091.1 794751 R 595495 CDS YP_006163092.1 386699255 12760920 complement(795748..796371) 1 NC_017660.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase RsmG 796371 rsmG 12760920 rsmG Escherichia coli KO11FL 16S rRNA methyltransferase RsmG YP_006163092.1 795748 R 595495 CDS YP_006163093.1 386699256 12760921 complement(796435..798324) 1 NC_017660.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 798324 mnmG 12760921 mnmG Escherichia coli KO11FL tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_006163093.1 796435 R 595495 CDS YP_006163094.1 386699257 12760922 complement(798703..799146) 1 NC_017660.1 COG0716 Flavodoxins; FMN-binding protein MioC 799146 mioC 12760922 mioC Escherichia coli KO11FL FMN-binding protein MioC YP_006163094.1 798703 R 595495 CDS YP_006163095.1 386699258 12760923 complement(799236..799694) 1 NC_017660.1 COG1522 Transcriptional regulators; DNA-binding transcriptional regulator AsnC 799694 asnC 12760923 asnC Escherichia coli KO11FL DNA-binding transcriptional regulator AsnC YP_006163095.1 799236 R 595495 CDS YP_006163096.1 386699259 12760924 799846..800838 1 NC_017660.1 COG2502 Asparagine synthetase A; asparagine synthetase AsnA 800838 asnA 12760924 asnA Escherichia coli KO11FL asparagine synthetase AsnA YP_006163096.1 799846 D 595495 CDS YP_006163097.1 386699260 12760925 complement(800843..802294) 1 NC_017660.1 COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; viaA; hypothetical protein 802294 12760925 KO11_03790 Escherichia coli KO11FL hypothetical protein YP_006163097.1 800843 R 595495 CDS YP_006163098.1 386699261 12760926 complement(802288..803784) 1 NC_017660.1 COG0714 MoxR-like ATPases; regulatory ATPase RavA 803784 ravA 12760926 ravA Escherichia coli KO11FL regulatory ATPase RavA YP_006163098.1 802288 R 595495 CDS YP_006163099.1 386699262 12760927 804007..805875 1 NC_017660.1 COG3158 K+ transporter; potassium transport protein Kup 805875 kup 12760927 kup Escherichia coli KO11FL potassium transport protein Kup YP_006163099.1 804007 D 595495 CDS YP_006163100.1 386699263 12760928 806042..806461 1 NC_017660.1 COG1869 ABC-type ribose transport system, auxiliary component; D-ribose pyranase 806461 rbsD 12760928 rbsD Escherichia coli KO11FL D-ribose pyranase YP_006163100.1 806042 D 595495 CDS YP_006163101.1 386699264 12760929 806469..807974 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; D-ribose transporter ATP-binding protein 807974 rbsA 12760929 rbsA Escherichia coli KO11FL D-ribose transporter ATP-binding protein YP_006163101.1 806469 D 595495 CDS YP_006163102.1 386699265 12760930 807979..808314 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; ribose ABC transporter permease 808314 rbsC 12760930 rbsC Escherichia coli KO11FL ribose ABC transporter permease YP_006163102.1 807979 D 595495 CDS YP_006163103.1 386699266 12760931 808265..808912 1 NC_017660.1 COG1609 Transcriptional regulators; transcriptional repressor RbsR 808912 rbsR 12760931 rbsR Escherichia coli KO11FL transcriptional repressor RbsR YP_006163103.1 808265 D 595495 CDS YP_006163104.1 386699267 12760932 complement(808878..810305) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative multidrug or homocysteine efflux system protein HsrA 810305 hsrA 12760932 hsrA Escherichia coli KO11FL putative multidrug or homocysteine efflux system protein HsrA YP_006163104.1 808878 R 595495 CDS YP_006163105.1 386699268 12760933 complement(810328..811020) 1 NC_017660.1 COG2186 Transcriptional regulators; putative transcriptional regulator 811020 yieP 12760933 yieP Escherichia coli KO11FL putative transcriptional regulator YP_006163105.1 810328 R 595495 CDS YP_006163106.1 386699269 12760940 complement(816821..817660) 1 NC_017660.1 COG0583 Transcriptional regulator; transcriptional regulator HdfR 817660 hdfR 12760940 hdfR Escherichia coli KO11FL transcriptional regulator HdfR YP_006163106.1 816821 R 595495 CDS YP_006163107.1 386699270 12760941 817779..818117 1 NC_017660.1 COG3085 Uncharacterized protein conserved in bacteria; yifE; hypothetical protein 818117 12760941 KO11_03840 Escherichia coli KO11FL hypothetical protein YP_006163107.1 817779 D 595495 CDS YP_006163108.1 386699271 12760942 complement(818142..819662) 1 NC_017660.1 COG0606 Predicted ATPase with chaperone activity; putative ATP-dependent protease 819662 yifB 12760942 yifB Escherichia coli KO11FL putative ATP-dependent protease YP_006163108.1 818142 R 595495 CDS YP_006163109.1 386699272 12760943 820015..820113 1 NC_017660.1 ilvG operon leader peptide 820113 ilvL 12760943 ilvL Escherichia coli KO11FL ilvG operon leader peptide YP_006163109.1 820015 D 595495 CDS YP_006163110.1 386699273 12760944 820253..821899 1 NC_017660.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase 2 catalytic subunit 821899 ilvG 12760944 ilvG Escherichia coli KO11FL acetolactate synthase 2 catalytic subunit YP_006163110.1 820253 D 595495 CDS YP_006163111.1 386699274 12760945 821899..822159 1 NC_017660.1 COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit; acetolactate synthase 2 regulatory subunit 822159 ilvM 12760945 ilvM Escherichia coli KO11FL acetolactate synthase 2 regulatory subunit YP_006163111.1 821899 D 595495 CDS YP_006163112.1 386699275 12760946 822179..823108 1 NC_017660.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase 823108 ilvE 12760946 ilvE Escherichia coli KO11FL branched-chain amino acid aminotransferase YP_006163112.1 822179 D 595495 CDS YP_006163113.1 386699276 12760947 823173..825023 1 NC_017660.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; dihydroxy-acid dehydratase 825023 ilvD 12760947 ilvD Escherichia coli KO11FL dihydroxy-acid dehydratase YP_006163113.1 823173 D 595495 CDS YP_006163114.1 386699277 12760948 825026..826570 1 NC_017660.1 COG1171 Threonine dehydratase; threonine dehydratase 826570 ilvA 12760948 ilvA Escherichia coli KO11FL threonine dehydratase YP_006163114.1 825026 D 595495 CDS YP_006163115.1 386699278 12760949 complement(826622..827515) 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional regulator IlvY 827515 ilvY 12760949 ilvY Escherichia coli KO11FL DNA-binding transcriptional regulator IlvY YP_006163115.1 826622 R 595495 CDS YP_006163116.1 386699279 12760950 827665..829140 1 NC_017660.1 COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase 829140 ilvC 12760950 ilvC Escherichia coli KO11FL ketol-acid reductoisomerase YP_006163116.1 827665 D 595495 CDS YP_006163117.1 386699280 12760951 complement(829227..829508) 1 NC_017660.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase C 829508 ppiC 12760951 ppiC Escherichia coli KO11FL peptidyl-prolyl cis-trans isomerase C YP_006163117.1 829227 R 595495 CDS YP_006163118.1 386699281 12760952 complement(829707..830156) 1 NC_017660.1 COG3692 Uncharacterized protein conserved in bacteria; yifN; hypothetical protein 830156 12760952 KO11_03890 Escherichia coli KO11FL hypothetical protein YP_006163118.1 829707 R 595495 CDS YP_006163119.1 386699282 12760953 830373..832394 1 NC_017660.1 COG0210 Superfamily I DNA and RNA helicases; ATP-dependent DNA helicase Rep 832394 rep 12760953 rep Escherichia coli KO11FL ATP-dependent DNA helicase Rep YP_006163119.1 830373 D 595495 CDS YP_006163120.1 386699283 12760954 complement(832441..833925) 1 NC_017660.1 COG0248 Exopolyphosphatase; guanosine pentaphosphate phosphohydrolase 833925 gpp 12760954 gpp Escherichia coli KO11FL guanosine pentaphosphate phosphohydrolase YP_006163120.1 832441 R 595495 CDS YP_006163121.1 386699284 12760955 complement(834059..835324) 1 NC_017660.1 COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlB 835324 rhlB 12760955 rhlB Escherichia coli KO11FL ATP-dependent RNA helicase RhlB YP_006163121.1 834059 R 595495 CDS YP_006163122.1 386699285 12760956 835455..835784 1 NC_017660.1 COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 835784 trxA 12760956 trxA Escherichia coli KO11FL thioredoxin YP_006163122.1 835455 D 595495 CDS YP_006163123.1 386699286 12760957 835925..836026 1 NC_017660.1 putative rho operon leader peptide 836026 rhoL 12760957 rhoL Escherichia coli KO11FL putative rho operon leader peptide YP_006163123.1 835925 D 595495 CDS YP_006163124.1 386699287 12760958 836111..837370 1 NC_017660.1 COG1158 Transcription termination factor; transcription termination factor Rho 837370 rho 12760958 rho Escherichia coli KO11FL transcription termination factor Rho YP_006163124.1 836111 D 595495 CDS YP_006163125.1 386699288 12760959 837380..837598 1 NC_017660.1 hypothetical protein 837598 12760959 KO11_03925 Escherichia coli KO11FL hypothetical protein YP_006163125.1 837380 D 595495 CDS YP_006163126.1 386699289 12760960 837610..838713 1 NC_017660.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 838713 rfe 12760960 rfe Escherichia coli KO11FL undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase YP_006163126.1 837610 D 595495 CDS YP_006163127.1 386699290 12760961 838725..839771 1 NC_017660.1 COG3765 Chain length determinant protein; lipopolysaccharide biosynthesis protein WzzE 839771 wzzE 12760961 wzzE Escherichia coli KO11FL lipopolysaccharide biosynthesis protein WzzE YP_006163127.1 838725 D 595495 CDS YP_006163128.1 386699291 12760962 839827..840957 1 NC_017660.1 COG0381 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 840957 rffE 12760962 rffE Escherichia coli KO11FL UDP-N-acetylglucosamine 2-epimerase YP_006163128.1 839827 D 595495 CDS YP_006163129.1 386699292 12760963 840954..842216 1 NC_017660.1 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; UDP-N-acetyl-D-mannosamine dehydrogenase 842216 rffD 12760963 rffD Escherichia coli KO11FL UDP-N-acetyl-D-mannosamine dehydrogenase YP_006163129.1 840954 D 595495 CDS YP_006163130.1 386699293 12760964 842216..843283 1 NC_017660.1 COG1088 dTDP-D-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 843283 rffG 12760964 rffG Escherichia coli KO11FL dTDP-glucose 4,6-dehydratase YP_006163130.1 842216 D 595495 CDS YP_006163131.1 386699294 12760965 843302..844183 1 NC_017660.1 COG1209 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase 844183 rffH 12760965 rffH Escherichia coli KO11FL glucose-1-phosphate thymidylyltransferase YP_006163131.1 843302 D 595495 CDS YP_006163132.1 386699295 12760966 844161..844835 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; TDP-fucosamine acetyltransferase 844835 rffC 12760966 rffC Escherichia coli KO11FL TDP-fucosamine acetyltransferase YP_006163132.1 844161 D 595495 CDS YP_006163133.1 386699296 12760967 844840..845970 1 NC_017660.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 845970 rffA 12760967 rffA Escherichia coli KO11FL TDP-4-oxo-6-deoxy-D-glucose transaminase YP_006163133.1 844840 D 595495 CDS YP_006163134.1 386699297 12760968 845972..847222 1 NC_017660.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; O-antigen translocase 847222 wzxE 12760968 wzxE Escherichia coli KO11FL O-antigen translocase YP_006163134.1 845972 D 595495 CDS YP_006163135.1 386699298 12760969 847219..848298 1 NC_017660.1 4-alpha-L-fucosyltransferase 848298 rffT 12760969 rffT Escherichia coli KO11FL 4-alpha-L-fucosyltransferase YP_006163135.1 847219 D 595495 CDS YP_006163136.1 386699299 12760970 848295..849647 1 NC_017660.1 putative common antigen polymerase 849647 wzyE 12760970 wzyE Escherichia coli KO11FL putative common antigen polymerase YP_006163136.1 848295 D 595495 CDS YP_006163137.1 386699300 12760971 849650..850390 1 NC_017660.1 COG1922 Teichoic acid biosynthesis proteins; putative UDP-N-acetyl-D-mannosaminuronic acid transferase 850390 rffM 12760971 rffM Escherichia coli KO11FL putative UDP-N-acetyl-D-mannosaminuronic acid transferase YP_006163137.1 849650 D 595495 CDS YP_006163138.1 386699301 12760972 850581..851966 1 NC_017660.1 COG1113 Gamma-aminobutyrate permease and related permeases; putative transport protein YifK 851966 yifK 12760972 yifK Escherichia coli KO11FL putative transport protein YifK YP_006163138.1 850581 D 595495 CDS YP_006163139.1 386699302 12760977 852652..853887 1 NC_017660.1 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); putative regulator of arylsulfatase activity AslB 853887 aslB 12760977 aslB Escherichia coli KO11FL putative regulator of arylsulfatase activity AslB YP_006163139.1 852652 D 595495 CDS YP_006163140.1 386699303 12760978 complement(853971..854132) 1 NC_017660.1 hypothetical protein 854132 12760978 KO11_04000 Escherichia coli KO11FL hypothetical protein YP_006163140.1 853971 R 595495 CDS YP_006163141.1 386699304 12760979 complement(854811..856007) 1 NC_017660.1 COG3071 Uncharacterized enzyme of heme biosynthesis; putative protoheme IX biogenesis protein 856007 hemY 12760979 hemY Escherichia coli KO11FL putative protoheme IX biogenesis protein YP_006163141.1 854811 R 595495 CDS YP_006163142.1 386699305 12760980 complement(856010..857209) 1 NC_017660.1 COG2959 Uncharacterized enzyme of heme biosynthesis; putative uroporphyrinogen III C-methyltransferase 857209 hemX 12760980 hemX Escherichia coli KO11FL putative uroporphyrinogen III C-methyltransferase YP_006163142.1 856010 R 595495 CDS YP_006163143.1 386699306 12760981 complement(857231..857971) 1 NC_017660.1 COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 857971 hemD 12760981 hemD Escherichia coli KO11FL uroporphyrinogen-III synthase YP_006163143.1 857231 R 595495 CDS YP_006163144.1 386699307 12760982 complement(857968..858909) 1 NC_017660.1 COG0181 Porphobilinogen deaminase; porphobilinogen deaminase 858909 hemC 12760982 hemC Escherichia coli KO11FL porphobilinogen deaminase YP_006163144.1 857968 R 595495 CDS YP_006163145.1 386699308 12760983 859296..861842 1 NC_017660.1 COG3072 Adenylate cyclase; adenylate cyclase 861842 cyaA 12760983 cyaA Escherichia coli KO11FL adenylate cyclase YP_006163145.1 859296 D 595495 CDS YP_006163146.1 386699309 12760984 complement(861882..862202) 1 NC_017660.1 COG1965 Protein implicated in iron transport, frataxin homolog; frataxin-like protein 862202 cyaY 12760984 cyaY Escherichia coli KO11FL frataxin-like protein YP_006163146.1 861882 R 595495 CDS YP_006163147.1 386699310 12760985 862665..862868 1 NC_017660.1 COG5567 Predicted small periplasmic lipoprotein; putative lipoprotein 862868 yifL 12760985 yifL Escherichia coli KO11FL putative lipoprotein YP_006163147.1 862665 D 595495 CDS YP_006163148.1 386699311 12760986 862905..863729 1 NC_017660.1 COG0253 Diaminopimelate epimerase; diaminopimelate epimerase 863729 dapF 12760986 dapF Escherichia coli KO11FL diaminopimelate epimerase YP_006163148.1 862905 D 595495 CDS YP_006163149.1 386699312 12760987 863726..864433 1 NC_017660.1 COG3159 Uncharacterized protein conserved in bacteria; yigA; hypothetical protein 864433 12760987 KO11_04050 Escherichia coli KO11FL hypothetical protein YP_006163149.1 863726 D 595495 CDS YP_006163150.1 386699313 12760988 864430..865326 1 NC_017660.1 COG4973 Site-specific recombinase XerC; site-specific tyrosine recombinase XerC 865326 xerC 12760988 xerC Escherichia coli KO11FL site-specific tyrosine recombinase XerC YP_006163150.1 864430 D 595495 CDS YP_006163151.1 386699314 12760989 865326..866042 1 NC_017660.1 COG1011 Predicted hydrolase (HAD superfamily); flavin mononucleotide phosphatase 866042 yigB 12760989 yigB Escherichia coli KO11FL flavin mononucleotide phosphatase YP_006163151.1 865326 D 595495 CDS YP_006163152.1 386699315 12760990 866126..868288 1 NC_017660.1 COG0210 Superfamily I DNA and RNA helicases; DNA-dependent helicase II 868288 uvrD 12760990 uvrD Escherichia coli KO11FL DNA-dependent helicase II YP_006163152.1 866126 D 595495 CDS YP_006163153.1 386699316 12760991 complement(868435..869199) 1 NC_017660.1 COG3698 Predicted periplasmic protein; yigE; hypothetical protein 869199 12760991 KO11_04070 Escherichia coli KO11FL hypothetical protein YP_006163153.1 868435 R 595495 CDS YP_006163154.1 386699317 12760992 869569..870519 1 NC_017660.1 COG0598 Mg2+ and Co2+ transporters; magnesium/nickel/cobalt transporter CorA 870519 corA 12760992 corA Escherichia coli KO11FL magnesium/nickel/cobalt transporter CorA YP_006163154.1 869569 D 595495 CDS YP_006163155.1 386699318 12760993 complement(870573..871052) 1 NC_017660.1 hypothetical protein 871052 12760993 KO11_04080 Escherichia coli KO11FL hypothetical protein YP_006163155.1 870573 R 595495 CDS YP_006163156.1 386699319 12760994 complement(871049..871384) 1 NC_017660.1 hypothetical protein 871384 12760994 KO11_04085 Escherichia coli KO11FL hypothetical protein YP_006163156.1 871049 R 595495 CDS YP_006163157.1 386699320 12760995 complement(871397..872605) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase IS4 family protein 872605 12760995 KO11_04090 Escherichia coli KO11FL transposase IS4 family protein YP_006163157.1 871397 R 595495 CDS YP_006163158.1 386699321 12760996 complement(872675..873235) 1 NC_017660.1 hypothetical protein 873235 12760996 KO11_04095 Escherichia coli KO11FL hypothetical protein YP_006163158.1 872675 R 595495 CDS YP_006163159.1 386699322 12760997 874190..874489 1 NC_017660.1 hypothetical protein 874489 12760997 KO11_04105 Escherichia coli KO11FL hypothetical protein YP_006163159.1 874190 D 595495 CDS YP_006163160.1 386699323 12760998 complement(874536..875423) 1 NC_017660.1 COG2962 Predicted permeases; putative chloramphenical resistance permease RarD 875423 rarD 12760998 rarD Escherichia coli KO11FL putative chloramphenical resistance permease RarD YP_006163160.1 874536 R 595495 CDS YP_006163161.1 386699324 12760999 complement(875475..875942) 1 NC_017660.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; yigI; hypothetical protein 875942 12760999 KO11_04115 Escherichia coli KO11FL hypothetical protein YP_006163161.1 875475 R 595495 CDS YP_006163162.1 386699325 12761000 876107..876976 1 NC_017660.1 COG2829 Outer membrane phospholipase A; phospholipase A 876976 pldA 12761000 pldA Escherichia coli KO11FL phospholipase A YP_006163162.1 876107 D 595495 CDS YP_006163163.1 386699326 12761001 877103..878938 1 NC_017660.1 COG0514 Superfamily II DNA helicase; ATP-dependent DNA helicase RecQ 878938 recQ 12761001 recQ Escherichia coli KO11FL ATP-dependent DNA helicase RecQ YP_006163163.1 877103 D 595495 CDS YP_006163164.1 386699327 12761002 879002..879622 1 NC_017660.1 COG1280 Putative threonine efflux protein; threonine efflux system 879622 rhtC 12761002 rhtC Escherichia coli KO11FL threonine efflux system YP_006163164.1 879002 D 595495 CDS YP_006163165.1 386699328 12761003 complement(879684..880304) 1 NC_017660.1 COG1280 Putative threonine efflux protein; homoserine/homoserine lactone efflux protein 880304 rhtB 12761003 rhtB Escherichia coli KO11FL homoserine/homoserine lactone efflux protein YP_006163165.1 879684 R 595495 CDS YP_006163166.1 386699329 12761004 880415..881437 1 NC_017660.1 COG2267 Lysophospholipase; lysophospholipase L2 881437 pldB 12761004 pldB Escherichia coli KO11FL lysophospholipase L2 YP_006163166.1 880415 D 595495 CDS YP_006163167.1 386699330 12761005 881445..882245 1 NC_017660.1 COG0561 Predicted hydrolases of the HAD superfamily; putative hydrolase 882245 yigL 12761005 yigL Escherichia coli KO11FL putative hydrolase YP_006163167.1 881445 D 595495 CDS YP_006163168.1 386699331 12761006 882321..883220 1 NC_017660.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; yigM; hypothetical protein 883220 12761006 KO11_04150 Escherichia coli KO11FL hypothetical protein YP_006163168.1 882321 D 595495 CDS YP_006163169.1 386699332 12761007 complement(883108..884061) 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional regulator MetR 884061 metR 12761007 metR Escherichia coli KO11FL DNA-binding transcriptional regulator MetR YP_006163169.1 883108 R 595495 CDS YP_006163170.1 386699333 12761008 884184..886445 1 NC_017660.1 COG0620 Methionine synthase II (cobalamin-independent); 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 886445 metE 12761008 metE Escherichia coli KO11FL 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_006163170.1 884184 D 595495 CDS YP_006163171.1 386699334 12761009 complement(886484..887299) 1 NC_017660.1 COG0412 Dienelactone hydrolase and related enzymes; hypothetical protein 887299 ysgA 12761009 ysgA Escherichia coli KO11FL hypothetical protein YP_006163171.1 886484 R 595495 CDS YP_006163172.1 386699335 12761010 887561..888322 1 NC_017660.1 COG2820 Uridine phosphorylase; uridine phosphorylase 888322 udp 12761010 udp Escherichia coli KO11FL uridine phosphorylase YP_006163172.1 887561 D 595495 CDS YP_006163173.1 386699336 12761011 888478..889890 1 NC_017660.1 COG1322 Uncharacterized protein conserved in bacteria; DNA recombination protein RmuC 889890 rmuC 12761011 rmuC Escherichia coli KO11FL DNA recombination protein RmuC YP_006163173.1 888478 D 595495 CDS YP_006163174.1 386699337 12761012 889985..890740 1 NC_017660.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase 890740 ubiE 12761012 ubiE Escherichia coli KO11FL ubiquinone/menaquinone biosynthesis methyltransferase YP_006163174.1 889985 D 595495 CDS YP_006163175.1 386699338 12761013 890754..891359 1 NC_017660.1 COG3165 Uncharacterized protein conserved in bacteria; yigP; hypothetical protein 891359 12761013 KO11_04185 Escherichia coli KO11FL hypothetical protein YP_006163175.1 890754 D 595495 CDS YP_006163176.1 386699339 12761014 891356..892996 1 NC_017660.1 COG0661 Predicted unusual protein kinase; putative ubiquinone biosynthesis protein UbiB 892996 ubiB 12761014 ubiB Escherichia coli KO11FL putative ubiquinone biosynthesis protein UbiB YP_006163176.1 891356 D 595495 CDS YP_006163177.1 386699340 12761015 893075..893344 1 NC_017660.1 COG1826 Sec-independent protein secretion pathway components; twin arginine translocase protein A 893344 tatA 12761015 tatA Escherichia coli KO11FL twin arginine translocase protein A YP_006163177.1 893075 D 595495 CDS YP_006163178.1 386699341 12761016 893348..893863 1 NC_017660.1 COG1826 Sec-independent protein secretion pathway components; sec-independent translocase 893863 tatB 12761016 tatB Escherichia coli KO11FL sec-independent translocase YP_006163178.1 893348 D 595495 CDS YP_006163179.1 386699342 12761017 893866..894642 1 NC_017660.1 COG0805 Sec-independent protein secretion pathway component TatC; twin-arginine protein translocation system subunit TatC 894642 tatC 12761017 tatC Escherichia coli KO11FL twin-arginine protein translocation system subunit TatC YP_006163179.1 893866 D 595495 CDS YP_006163180.1 386699343 12761018 894684..894908 1 NC_017660.1 COG0084 Mg-dependent DNase; DNase TatD 894908 12761018 KO11_04210 Escherichia coli KO11FL DNase TatD YP_006163180.1 894684 D 595495 CDS YP_006163181.1 386699344 12761019 894942..895466 1 NC_017660.1 COG0084 Mg-dependent DNase; DNase TatD 895466 12761019 KO11_04215 Escherichia coli KO11FL DNase TatD YP_006163181.1 894942 D 595495 CDS YP_006163182.1 386699345 12761020 complement(895463..895951) 1 NC_017660.1 COG0250 Transcription antiterminator; transcriptional activator RfaH 895951 rfaH 12761020 rfaH Escherichia coli KO11FL transcriptional activator RfaH YP_006163182.1 895463 R 595495 CDS YP_006163183.1 386699346 12761021 896118..897611 1 NC_017660.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 897611 ubiD 12761021 ubiD Escherichia coli KO11FL 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_006163183.1 896118 D 595495 CDS YP_006163184.1 386699347 12761022 897657..898358 1 NC_017660.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; FMN reductase 898358 fre 12761022 fre Escherichia coli KO11FL FMN reductase YP_006163184.1 897657 D 595495 CDS YP_006163185.1 386699348 12761023 complement(898550..899713) 1 NC_017660.1 COG0183 Acetyl-CoA acetyltransferase; 3-ketoacyl-CoA thiolase 899713 fadA 12761023 fadA Escherichia coli KO11FL 3-ketoacyl-CoA thiolase YP_006163185.1 898550 R 595495 CDS YP_006163186.1 386699349 12761024 complement(899723..901912) 1 NC_017660.1 COG1024 Enoyl-CoA hydratase/carnithine racemase; multifunctional fatty acid oxidation complex subunit alpha 901912 fadB 12761024 fadB Escherichia coli KO11FL multifunctional fatty acid oxidation complex subunit alpha YP_006163186.1 899723 R 595495 CDS YP_006163187.1 386699350 12761025 902102..903433 1 NC_017660.1 COG0006 Xaa-Pro aminopeptidase; proline dipeptidase 903433 pepQ 12761025 pepQ Escherichia coli KO11FL proline dipeptidase YP_006163187.1 902102 D 595495 CDS YP_006163188.1 386699351 12761026 903433..904047 1 NC_017660.1 COG1739 Uncharacterized conserved protein; yigZ; hypothetical protein 904047 12761026 KO11_04250 Escherichia coli KO11FL hypothetical protein YP_006163188.1 903433 D 595495 CDS YP_006163189.1 386699352 12761027 904086..905537 1 NC_017660.1 COG0168 Trk-type K+ transport systems, membrane components; potassium transporter 905537 trkH 12761027 trkH Escherichia coli KO11FL potassium transporter YP_006163189.1 904086 D 595495 CDS YP_006163190.1 386699353 12761028 905549..906094 1 NC_017660.1 COG4635 Flavodoxin; protoporphyrinogen oxidase 906094 hemG 12761028 hemG Escherichia coli KO11FL protoporphyrinogen oxidase YP_006163190.1 905549 D 595495 CDS YP_006163191.1 386699354 12761034 complement(911676..912203) 1 NC_017660.1 COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein MobB 912203 mobB 12761034 mobB Escherichia coli KO11FL molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_006163191.1 911676 R 595495 CDS YP_006163192.1 386699355 12761035 complement(912185..912769) 1 NC_017660.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 912769 mobA 12761035 mobA Escherichia coli KO11FL molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_006163192.1 912185 R 595495 CDS YP_006163193.1 386699356 12761036 912839..913108 1 NC_017660.1 COG3084 Uncharacterized protein conserved in bacteria; yihD; hypothetical protein 913108 12761036 KO11_04275 Escherichia coli KO11FL hypothetical protein YP_006163193.1 912839 D 595495 CDS YP_006163194.1 386699357 12761037 913185..914171 1 NC_017660.1 COG2334 Putative homoserine kinase type II (protein kinase fold); serine/threonine protein kinase 914171 rdoA 12761037 rdoA Escherichia coli KO11FL serine/threonine protein kinase YP_006163194.1 913185 D 595495 CDS YP_006163195.1 386699358 12761038 914188..914814 1 NC_017660.1 COG0526 Thiol-disulfide isomerase and thioredoxins; protein disulfide isomerase I 914814 dsbA 12761038 dsbA Escherichia coli KO11FL protein disulfide isomerase I YP_006163195.1 914188 D 595495 CDS YP_006163196.1 386699359 12761039 914968..915261 1 NC_017660.1 COG5339 Uncharacterized protein conserved in bacteria; yihF1; hypothetical protein 915261 12761039 KO11_04290 Escherichia coli KO11FL hypothetical protein YP_006163196.1 914968 D 595495 CDS YP_006163197.1 386699360 12761040 915365..916573 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase IS4 family protein 916573 12761040 KO11_04295 Escherichia coli KO11FL transposase IS4 family protein YP_006163197.1 915365 D 595495 CDS YP_006163198.1 386699361 12761041 916615..917736 1 NC_017660.1 COG5339 Uncharacterized protein conserved in bacteria; yihF2; hypothetical protein 917736 12761041 KO11_04300 Escherichia coli KO11FL hypothetical protein YP_006163198.1 916615 D 595495 CDS YP_006163199.1 386699362 12761042 complement(917777..918709) 1 NC_017660.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; putative acyltransferase 918709 yihG 12761042 yihG Escherichia coli KO11FL putative acyltransferase YP_006163199.1 917777 R 595495 CDS YP_006163200.1 386699363 12761043 complement(918829..919071) 1 NC_017660.1 hypothetical protein 919071 12761043 KO11_04310 Escherichia coli KO11FL hypothetical protein YP_006163200.1 918829 R 595495 CDS YP_006163201.1 386699364 12761044 919073..921859 1 NC_017660.1 COG0258 5-3 exonuclease (including N-terminal domain of PolI); DNA polymerase I 921859 polA 12761044 polA Escherichia coli KO11FL DNA polymerase I YP_006163201.1 919073 D 595495 CDS YP_006163202.1 386699365 12761045 complement(922241..922837) 1 NC_017660.1 COG0218 Predicted GTPase; cell division protein 922837 yihA 12761045 yihA Escherichia coli KO11FL cell division protein YP_006163202.1 922241 R 595495 CDS YP_006163203.1 386699366 12761046 923455..923964 1 NC_017660.1 COG3078 Uncharacterized protein conserved in bacteria; GTPase activator 923964 yihI 12761046 yihI Escherichia coli KO11FL GTPase activator YP_006163203.1 923455 D 595495 CDS YP_006163204.1 386699367 12761047 924153..925526 1 NC_017660.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 925526 hemN 12761047 hemN Escherichia coli KO11FL coproporphyrinogen III oxidase YP_006163204.1 924153 D 595495 CDS YP_006163205.1 386699368 12761048 complement(925716..925826) 1 NC_017660.1 yshB; hypothetical protein 925826 12761048 KO11_04335 Escherichia coli KO11FL hypothetical protein YP_006163205.1 925716 R 595495 CDS YP_006163206.1 386699369 12761049 complement(925938..927347) 1 NC_017660.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; nitrogen regulation protein NR(I) 927347 glnG 12761049 glnG Escherichia coli KO11FL nitrogen regulation protein NR(I) YP_006163206.1 925938 R 595495 CDS YP_006163207.1 386699370 12761050 complement(927359..928408) 1 NC_017660.1 COG3852 Signal transduction histidine kinase, nitrogen specific; nitrogen regulation protein NR(II) 928408 glnL 12761050 glnL Escherichia coli KO11FL nitrogen regulation protein NR(II) YP_006163207.1 927359 R 595495 CDS YP_006163208.1 386699371 12761051 928507..928686 1 NC_017660.1 hypothetical protein 928686 12761051 KO11_04350 Escherichia coli KO11FL hypothetical protein YP_006163208.1 928507 D 595495 CDS YP_006163209.1 386699372 12761052 complement(928727..930136) 1 NC_017660.1 COG0174 Glutamine synthetase; glutamine synthetase 930136 glnA 12761052 glnA Escherichia coli KO11FL glutamine synthetase YP_006163209.1 928727 R 595495 CDS YP_006163210.1 386699373 12761053 930509..932332 1 NC_017660.1 COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein 932332 typA 12761053 typA Escherichia coli KO11FL GTP-binding protein YP_006163210.1 930509 D 595495 CDS YP_006163211.1 386699374 12761054 932549..933259 1 NC_017660.1 COG2188 Transcriptional regulators; putative DNA-binding transcriptional regulator 933259 yihL 12761054 yihL Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163211.1 932549 D 595495 CDS YP_006163212.1 386699375 12761055 933267..934247 1 NC_017660.1 COG1082 Sugar phosphate isomerases/epimerases; putative sugar phosphate isomerase 934247 yihM 12761055 yihM Escherichia coli KO11FL putative sugar phosphate isomerase YP_006163212.1 933267 D 595495 CDS YP_006163213.1 386699376 12761056 934349..935614 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 935614 yihN 12761056 yihN Escherichia coli KO11FL putative transporter YP_006163213.1 934349 D 595495 CDS YP_006163214.1 386699377 12761057 complement(935737..936945) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase IS4 family protein 936945 12761057 KO11_04380 Escherichia coli KO11FL transposase IS4 family protein YP_006163214.1 935737 R 595495 CDS YP_006163215.1 386699378 12761058 937052..937552 1 NC_017660.1 hypothetical protein 937552 12761058 KO11_04385 Escherichia coli KO11FL hypothetical protein YP_006163215.1 937052 D 595495 CDS YP_006163216.1 386699379 12761059 938246..938680 1 NC_017660.1 hypothetical protein 938680 12761059 KO11_04390 Escherichia coli KO11FL hypothetical protein YP_006163216.1 938246 D 595495 CDS YP_006163217.1 386699380 12761060 939037..940788 1 NC_017660.1 COG3593 Predicted ATP-dependent endonuclease of the OLD family; SMC domain-containing protein 940788 12761060 KO11_04395 Escherichia coli KO11FL SMC domain-containing protein YP_006163217.1 939037 D 595495 CDS YP_006163218.1 386699381 12761061 940790..942415 1 NC_017660.1 COG0210 Superfamily I DNA and RNA helicases; UvrD/REP helicase 942415 12761061 KO11_04400 Escherichia coli KO11FL UvrD/REP helicase YP_006163218.1 940790 D 595495 CDS YP_006163219.1 386699382 12761062 complement(942511..943734) 1 NC_017660.1 COG0582 Integrase; hypothetical protein 943734 12761062 KO11_04405 Escherichia coli KO11FL hypothetical protein YP_006163219.1 942511 R 595495 CDS YP_006163220.1 386699383 12761064 944284..945666 1 NC_017660.1 COG2211 Na+/melibiose symporter and related transporters; putative transporter 945666 yicJ 12761064 yicJ Escherichia coli KO11FL putative transporter YP_006163220.1 944284 D 595495 CDS YP_006163221.1 386699384 12761065 945676..947994 1 NC_017660.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; putative alpha-glucosidase 947994 yicI 12761065 yicI Escherichia coli KO11FL putative alpha-glucosidase YP_006163221.1 945676 D 595495 CDS YP_006163222.1 386699385 12761066 complement(948046..949755) 1 NC_017660.1 AsmA family protein 949755 yicH 12761066 yicH Escherichia coli KO11FL AsmA family protein YP_006163222.1 948046 R 595495 CDS YP_006163223.1 386699386 12761067 complement(949876..951267) 1 NC_017660.1 COG2233 Xanthine/uracil permeases; putative purine transport protein 951267 xanP 12761067 xanP Escherichia coli KO11FL putative purine transport protein YP_006163223.1 949876 R 595495 CDS YP_006163224.1 386699387 12761068 951547..952752 1 NC_017660.1 COG0786 Na+/glutamate symporter; sodium/glutamate symporter 952752 gltS 12761068 gltS Escherichia coli KO11FL sodium/glutamate symporter YP_006163224.1 951547 D 595495 CDS YP_006163225.1 386699388 12761069 952755..953621 1 NC_017660.1 hypothetical protein 953621 12761069 KO11_04435 Escherichia coli KO11FL hypothetical protein YP_006163225.1 952755 D 595495 CDS YP_006163226.1 386699389 12761070 complement(953606..955687) 1 NC_017660.1 COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG 955687 recG 12761070 recG Escherichia coli KO11FL ATP-dependent DNA helicase RecG YP_006163226.1 953606 R 595495 CDS YP_006163227.1 386699390 12761071 complement(955693..956382) 1 NC_017660.1 COG0566 rRNA methylases; tRNA guanosine-2'-O-methyltransferase 956382 trmH 12761071 trmH Escherichia coli KO11FL tRNA guanosine-2'-O-methyltransferase YP_006163227.1 955693 R 595495 CDS YP_006163228.1 386699391 12761072 complement(956389..958497) 1 NC_017660.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 958497 spoT 12761072 spoT Escherichia coli KO11FL bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_006163228.1 956389 R 595495 CDS YP_006163229.1 386699392 12761073 complement(958516..958791) 1 NC_017660.1 COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega 958791 rpoZ 12761073 rpoZ Escherichia coli KO11FL DNA-directed RNA polymerase subunit omega YP_006163229.1 958516 R 595495 CDS YP_006163230.1 386699393 12761074 complement(958846..959469) 1 NC_017660.1 COG0194 Guanylate kinase; guanylate kinase 959469 gmk 12761074 gmk Escherichia coli KO11FL guanylate kinase YP_006163230.1 958846 R 595495 CDS YP_006163231.1 386699394 12761075 959727..961409 1 NC_017660.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigB 961409 ligB 12761075 ligB Escherichia coli KO11FL NAD-dependent DNA ligase LigB YP_006163231.1 959727 D 595495 CDS YP_006163232.1 386699395 12761076 complement(961406..962023) 1 NC_017660.1 COG2860 Predicted membrane protein; yicG; hypothetical protein 962023 12761076 KO11_04470 Escherichia coli KO11FL hypothetical protein YP_006163232.1 961406 R 595495 CDS YP_006163233.1 386699396 12761077 complement(962315..963139) 1 NC_017660.1 DNA-damage-inducible protein D 963139 dinD 12761077 dinD Escherichia coli KO11FL DNA-damage-inducible protein D YP_006163233.1 962315 R 595495 CDS YP_006163234.1 386699397 12761078 complement(963360..964223) 1 NC_017660.1 COG1561 Uncharacterized stress-induced protein; yicC; hypothetical protein 964223 12761078 KO11_04480 Escherichia coli KO11FL hypothetical protein YP_006163234.1 963360 R 595495 CDS YP_006163235.1 386699398 12761079 964350..965066 1 NC_017660.1 COG0689 RNase PH; ribonuclease PH 965066 rph 12761079 rph Escherichia coli KO11FL ribonuclease PH YP_006163235.1 964350 D 595495 CDS YP_006163236.1 386699399 12761080 965132..965773 1 NC_017660.1 COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 965773 pyrE 12761080 pyrE Escherichia coli KO11FL orotate phosphoribosyltransferase YP_006163236.1 965132 D 595495 CDS YP_006163237.1 386699400 12761081 complement(965810..966406) 1 NC_017660.1 COG1309 Transcriptional regulator; division inhibitor protein 966406 slmA 12761081 slmA Escherichia coli KO11FL division inhibitor protein YP_006163237.1 965810 R 595495 CDS YP_006163238.1 386699401 12761082 complement(966513..966971) 1 NC_017660.1 COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase 966971 dut 12761082 dut Escherichia coli KO11FL deoxyuridine 5'-triphosphate nucleotidohydrolase YP_006163238.1 966513 R 595495 CDS YP_006163239.1 386699402 12761083 complement(966949..968169) 1 NC_017660.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 968169 dfp 12761083 dfp Escherichia coli KO11FL bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_006163239.1 966949 R 595495 CDS YP_006163240.1 386699403 12761084 968341..969009 1 NC_017660.1 COG2003 DNA repair proteins; hypothetical protein 969009 12761084 KO11_04510 Escherichia coli KO11FL hypothetical protein YP_006163240.1 968341 D 595495 CDS YP_006163241.1 386699404 12761085 969226..969462 1 NC_017660.1 COG0227 Ribosomal protein L28; 50S ribosomal protein L28 969462 rpmB 12761085 rpmB Escherichia coli KO11FL 50S ribosomal protein L28 YP_006163241.1 969226 D 595495 CDS YP_006163242.1 386699405 12761086 969483..969650 1 NC_017660.1 COG0267 Ribosomal protein L33; 50S ribosomal protein L33 969650 rpmG 12761086 rpmG Escherichia coli KO11FL 50S ribosomal protein L33 YP_006163242.1 969483 D 595495 CDS YP_006163243.1 386699406 12761087 969748..970557 1 NC_017660.1 COG0266 Formamidopyrimidine-DNA glycosylase; formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase 970557 mutM 12761087 mutM Escherichia coli KO11FL formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase YP_006163243.1 969748 D 595495 CDS YP_006163244.1 386699407 12761088 complement(970596..971075) 1 NC_017660.1 COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase 971075 coaD 12761088 coaD Escherichia coli KO11FL phosphopantetheine adenylyltransferase YP_006163244.1 970596 R 595495 CDS YP_006163245.1 386699408 12761089 complement(971083..972360) 1 NC_017660.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 972360 waaA 12761089 waaA Escherichia coli KO11FL 3-deoxy-D-manno-octulosonic-acid transferase YP_006163245.1 971083 R 595495 CDS YP_006163246.1 386699409 12761090 972809..973831 1 NC_017660.1 COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide core biosynthesis protein 973831 rfaQ 12761090 rfaQ Escherichia coli KO11FL lipopolysaccharide core biosynthesis protein YP_006163246.1 972809 D 595495 CDS YP_006163247.1 386699410 12761091 973828..974952 1 NC_017660.1 COG0438 Glycosyltransferase; glucosyltransferase I RfaG 974952 rfaG 12761091 rfaG Escherichia coli KO11FL glucosyltransferase I RfaG YP_006163247.1 973828 D 595495 CDS YP_006163248.1 386699411 12761092 974945..975742 1 NC_017660.1 COG0515 Serine/threonine protein kinase; lipopolysaccharide core heptose(I) kinase RfaP 975742 rfaP 12761092 rfaP Escherichia coli KO11FL lipopolysaccharide core heptose(I) kinase RfaP YP_006163248.1 974945 D 595495 CDS YP_006163249.1 386699412 12761093 975758..976774 1 NC_017660.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,3-galactosyltransferase 976774 rfaI 12761093 rfaI Escherichia coli KO11FL lipopolysaccharide 1,3-galactosyltransferase YP_006163249.1 975758 D 595495 CDS YP_006163250.1 386699413 12761094 976791..977786 1 NC_017660.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glucosyltransferase 977786 12761094 KO11_04560 Escherichia coli KO11FL lipopolysaccharide 1,2-glucosyltransferase YP_006163250.1 976791 D 595495 CDS YP_006163251.1 386699414 12761095 977796..978488 1 NC_017660.1 COG0661 Predicted unusual protein kinase; lipopolysaccharide core biosynthesis protein 978488 12761095 KO11_04565 Escherichia coli KO11FL lipopolysaccharide core biosynthesis protein YP_006163251.1 977796 D 595495 CDS YP_006163252.1 386699415 12761096 978514..979542 1 NC_017660.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase 979542 12761096 KO11_04570 Escherichia coli KO11FL UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase YP_006163252.1 978514 D 595495 CDS YP_006163253.1 386699416 12761097 979624..980607 1 NC_017660.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; putative beta1,3-glucosyltransferase 980607 12761097 KO11_04575 Escherichia coli KO11FL putative beta1,3-glucosyltransferase YP_006163253.1 979624 D 595495 CDS YP_006163254.1 386699417 12761098 980653..981906 1 NC_017660.1 COG3307 Lipid A core - O-antigen ligase and related enzymes; lipid A-core surface O-antigen ligase 981906 rfaL 12761098 rfaL Escherichia coli KO11FL lipid A-core surface O-antigen ligase YP_006163254.1 980653 D 595495 CDS YP_006163255.1 386699418 12761099 complement(981976..982947) 1 NC_017660.1 COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase 982947 rfaC 12761099 rfaC Escherichia coli KO11FL ADP-heptose--LPS heptosyltransferase YP_006163255.1 981976 R 595495 CDS YP_006163256.1 386699419 12761100 complement(982951..983997) 1 NC_017660.1 COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase 983997 rfaF 12761100 rfaF Escherichia coli KO11FL ADP-heptose--LPS heptosyltransferase YP_006163256.1 982951 R 595495 CDS YP_006163257.1 386699420 12761101 complement(984007..984939) 1 NC_017660.1 COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-L-glycero-D-manno-heptose-6-epimerase 984939 rfaD 12761101 rfaD Escherichia coli KO11FL ADP-L-glycero-D-manno-heptose-6-epimerase YP_006163257.1 984007 R 595495 CDS YP_006163258.1 386699421 12761102 985153..986349 1 NC_017660.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 2-amino-3-ketobutyrate coenzyme A ligase 986349 kbl 12761102 kbl Escherichia coli KO11FL 2-amino-3-ketobutyrate coenzyme A ligase YP_006163258.1 985153 D 595495 CDS YP_006163259.1 386699422 12761103 986359..987384 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; L-threonine 3-dehydrogenase 987384 tdh 12761103 tdh Escherichia coli KO11FL L-threonine 3-dehydrogenase YP_006163259.1 986359 D 595495 CDS YP_006163260.1 386699423 12761104 987623..988657 1 NC_017660.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyl transferase 988657 yibD 12761104 yibD Escherichia coli KO11FL putative glycosyl transferase YP_006163260.1 987623 D 595495 CDS YP_006163261.1 386699424 12761105 complement(988644..989603) 1 NC_017660.1 COG2861 Uncharacterized protein conserved in bacteria; putative polysaccharide deacetylase 989603 yibQ 12761105 yibQ Escherichia coli KO11FL putative polysaccharide deacetylase YP_006163261.1 988644 R 595495 CDS YP_006163262.1 386699425 12761106 complement(989607..990866) 1 NC_017660.1 COG4942 Membrane-bound metallopeptidase; AmiB activator 990866 envC 12761106 envC Escherichia coli KO11FL AmiB activator YP_006163262.1 989607 R 595495 CDS YP_006163263.1 386699426 12761107 complement(990900..992444) 1 NC_017660.1 COG0696 Phosphoglyceromutase; phosphoglyceromutase 992444 gpmM 12761107 gpmM Escherichia coli KO11FL phosphoglyceromutase YP_006163263.1 990900 R 595495 CDS YP_006163264.1 386699427 12761108 992689..993120 1 NC_017660.1 COG0607 Rhodanese-related sulfurtransferase; yibN; hypothetical protein 993120 12761108 KO11_04630 Escherichia coli KO11FL hypothetical protein YP_006163264.1 992689 D 595495 CDS YP_006163265.1 386699428 12761109 993262..993513 1 NC_017660.1 COG0695 Glutaredoxin and related proteins; glutaredoxin 3 993513 grxC 12761109 grxC Escherichia coli KO11FL glutaredoxin 3 YP_006163265.1 993262 D 595495 CDS YP_006163266.1 386699429 12761110 993576..994043 1 NC_017660.1 COG1952 Preprotein translocase subunit SecB; preprotein translocase subunit SecB 994043 secB 12761110 secB Escherichia coli KO11FL preprotein translocase subunit SecB YP_006163266.1 993576 D 595495 CDS YP_006163267.1 386699430 12761111 994043..995062 1 NC_017660.1 COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 995062 gpsA 12761111 gpsA Escherichia coli KO11FL NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_006163267.1 994043 D 595495 CDS YP_006163268.1 386699431 12761112 995142..995963 1 NC_017660.1 COG1045 Serine acetyltransferase; serine acetyltransferase 995963 cysE 12761112 cysE Escherichia coli KO11FL serine acetyltransferase YP_006163268.1 995142 D 595495 CDS YP_006163269.1 386699432 12761113 complement(996016..996489) 1 NC_017660.1 COG0219 Predicted rRNA methylase (SpoU class); putative rRNA methylase 996489 trmL 12761113 trmL Escherichia coli KO11FL putative rRNA methylase YP_006163269.1 996016 R 595495 CDS YP_006163270.1 386699433 12761114 complement(996644..997834) 1 NC_017660.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; L-lactate dehydrogenase 997834 lldD 12761114 lldD Escherichia coli KO11FL L-lactate dehydrogenase YP_006163270.1 996644 R 595495 CDS YP_006163271.1 386699434 12761115 complement(997831..998607) 1 NC_017660.1 COG2186 Transcriptional regulators; DNA-binding transcriptional repressor LldR 998607 lldR 12761115 lldR Escherichia coli KO11FL DNA-binding transcriptional repressor LldR YP_006163271.1 997831 R 595495 CDS YP_006163272.1 386699435 12761116 complement(998607..1000262) 1 NC_017660.1 COG1620 L-lactate permease; L-lactate permease 1000262 lldP 12761116 lldP Escherichia coli KO11FL L-lactate permease YP_006163272.1 998607 R 595495 CDS YP_006163273.1 386699436 12761117 complement(1000631..1005481) 1 NC_017660.1 COG5295 Autotransporter adhesin; putative adhesin 1005481 12761117 KO11_04675 Escherichia coli KO11FL putative adhesin YP_006163273.1 1000631 R 595495 CDS YP_006163274.1 386699437 12761118 complement(1005525..1006208) 1 NC_017660.1 hypothetical protein 1006208 12761118 KO11_04680 Escherichia coli KO11FL hypothetical protein YP_006163274.1 1005525 R 595495 CDS YP_006163275.1 386699438 12761119 complement(1006752..1007114) 1 NC_017660.1 yibL; hypothetical protein 1007114 12761119 KO11_04685 Escherichia coli KO11FL hypothetical protein YP_006163275.1 1006752 R 595495 CDS YP_006163276.1 386699439 12761120 1007399..1007608 1 NC_017660.1 yibT; hypothetical protein 1007608 12761120 KO11_04690 Escherichia coli KO11FL hypothetical protein YP_006163276.1 1007399 D 595495 CDS YP_006163277.1 386699440 12761121 complement(1007620..1008207) 1 NC_017660.1 COG3722 Transcriptional regulator; mannitol repressor protein 1008207 mtlR 12761121 mtlR Escherichia coli KO11FL mannitol repressor protein YP_006163277.1 1007620 R 595495 CDS YP_006163278.1 386699441 12761122 complement(1008207..1009355) 1 NC_017660.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases; mannitol-1-phosphate 5-dehydrogenase 1009355 mtlD 12761122 mtlD Escherichia coli KO11FL mannitol-1-phosphate 5-dehydrogenase YP_006163278.1 1008207 R 595495 CDS YP_006163279.1 386699442 12761123 complement(1009585..1011498) 1 NC_017660.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component; PTS system mannitol-specific transporter subunit IICBA 1011498 mtlA 12761123 mtlA Escherichia coli KO11FL PTS system mannitol-specific transporter subunit IICBA YP_006163279.1 1009585 R 595495 CDS YP_006163280.1 386699443 12761124 1012035..1012397 1 NC_017660.1 yibI; hypothetical protein 1012397 12761124 KO11_04710 Escherichia coli KO11FL hypothetical protein YP_006163280.1 1012035 D 595495 CDS YP_006163281.1 386699444 12761125 1012400..1013536 1 NC_017660.1 COG1566 Multidrug resistance efflux pump; Inner membrane protein yibH 1013536 yibH 12761125 yibH Escherichia coli KO11FL Inner membrane protein yibH YP_006163281.1 1012400 D 595495 CDS YP_006163282.1 386699445 12761126 complement(1013996..1014433) 1 NC_017660.1 hypothetical protein 1014433 12761126 KO11_04720 Escherichia coli KO11FL hypothetical protein YP_006163282.1 1013996 R 595495 CDS YP_006163283.1 386699446 12761127 complement(1015140..1015601) 1 NC_017660.1 COG0790 FOG: TPR repeat, SEL1 subfamily; yibG; hypothetical protein 1015601 12761127 KO11_04725 Escherichia coli KO11FL hypothetical protein YP_006163283.1 1015140 R 595495 CDS YP_006163284.1 386699447 12761128 complement(1015613..1016551) 1 NC_017660.1 COG3209 Rhs family protein; Rhs family protein 1016551 12761128 KO11_04730 Escherichia coli KO11FL Rhs family protein YP_006163284.1 1015613 R 595495 CDS YP_006163285.1 386699448 12761129 complement(1016599..1017441) 1 NC_017660.1 COG1413 FOG: HEAT repeat; putative lyase 1017441 yibA 12761129 yibA Escherichia coli KO11FL putative lyase YP_006163285.1 1016599 R 595495 CDS YP_006163286.1 386699449 12761130 complement(1017546..1017929) 1 NC_017660.1 hypothetical protein 1017929 12761130 KO11_04740 Escherichia coli KO11FL hypothetical protein YP_006163286.1 1017546 R 595495 CDS YP_006163287.1 386699450 12761131 complement(1017901..1022124) 1 NC_017660.1 COG3209 Rhs family protein; RhsB core protein 1022124 rhsW6 12761131 rhsW6 Escherichia coli KO11FL RhsB core protein YP_006163287.1 1017901 R 595495 CDS YP_006163288.1 386699451 12761132 1022353..1022961 1 NC_017660.1 COG0625 Glutathione S-transferase; putative glutathione S-transferase 1022961 yibF 12761132 yibF Escherichia coli KO11FL putative glutathione S-transferase YP_006163288.1 1022353 D 595495 CDS YP_006163289.1 386699452 12761133 1023059..1024450 1 NC_017660.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 1024450 selA 12761133 selA Escherichia coli KO11FL selenocysteine synthase YP_006163289.1 1023059 D 595495 CDS YP_006163290.1 386699453 12761134 1024447..1026291 1 NC_017660.1 COG3276 Selenocysteine-specific translation elongation factor; selenocysteinyl-tRNA-specific translation factor 1026291 selB 12761134 selB Escherichia coli KO11FL selenocysteinyl-tRNA-specific translation factor YP_006163290.1 1024447 D 595495 CDS YP_006163291.1 386699454 12761135 1026481..1027632 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; putative alcohol dehydrogenase 1027632 yiaY 12761135 yiaY Escherichia coli KO11FL putative alcohol dehydrogenase YP_006163291.1 1026481 D 595495 CDS YP_006163292.1 386699455 12761136 1027797..1029335 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase 1029335 aldB 12761136 aldB Escherichia coli KO11FL aldehyde dehydrogenase YP_006163292.1 1027797 D 595495 CDS YP_006163293.1 386699456 12761137 complement(1029554..1029766) 1 NC_017660.1 hypothetical protein 1029766 12761137 KO11_04775 Escherichia coli KO11FL hypothetical protein YP_006163293.1 1029554 R 595495 CDS YP_006163294.1 386699457 12761138 1029880..1030203 1 NC_017660.1 yiaW; hypothetical protein 1030203 12761138 KO11_04780 Escherichia coli KO11FL hypothetical protein YP_006163294.1 1029880 D 595495 CDS YP_006163295.1 386699458 12761139 1030209..1031345 1 NC_017660.1 COG1566 Multidrug resistance efflux pump; membrane fusion protein (MFP) component of efflux pump, signal anchor 1031345 yiaV 12761139 yiaV Escherichia coli KO11FL membrane fusion protein (MFP) component of efflux pump, signal anchor YP_006163295.1 1030209 D 595495 CDS YP_006163296.1 386699459 12761140 complement(1031342..1032316) 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 1032316 yiaU 12761140 yiaU Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163296.1 1031342 R 595495 CDS YP_006163297.1 386699460 12761141 1032440..1033180 1 NC_017660.1 COG3713 Outer membrane protein V; yiaT; hypothetical protein 1033180 12761141 KO11_04795 Escherichia coli KO11FL hypothetical protein YP_006163297.1 1032440 D 595495 CDS YP_006163298.1 386699461 12761142 1033220..1033360 1 NC_017660.1 hypothetical protein 1033360 12761142 KO11_04800 Escherichia coli KO11FL hypothetical protein YP_006163298.1 1033220 D 595495 CDS YP_006163299.1 386699462 12761143 complement(1033527..1034222) 1 NC_017660.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase 1034222 sgbE 12761143 sgbE Escherichia coli KO11FL L-ribulose-5-phosphate 4-epimerase YP_006163299.1 1033527 R 595495 CDS YP_006163300.1 386699463 12761144 complement(1034216..1035076) 1 NC_017660.1 COG3623 Putative L-xylulose-5-phosphate 3-epimerase; putative L-xylulose 5-phosphate 3-epimerase 1035076 sgbU 12761144 sgbU Escherichia coli KO11FL putative L-xylulose 5-phosphate 3-epimerase YP_006163300.1 1034216 R 595495 CDS YP_006163301.1 386699464 12761145 complement(1035069..1035731) 1 NC_017660.1 COG0269 3-hexulose-6-phosphate synthase and related proteins; 3-keto-L-gulonate-6-phosphate decarboxylase 1035731 sgbH 12761145 sgbH Escherichia coli KO11FL 3-keto-L-gulonate-6-phosphate decarboxylase YP_006163301.1 1035069 R 595495 CDS YP_006163302.1 386699465 12761146 complement(1035728..1037224) 1 NC_017660.1 COG1070 Sugar (pentulose and hexulose) kinases; L-xylulose kinase 1037224 lyxK 12761146 lyxK Escherichia coli KO11FL L-xylulose kinase YP_006163302.1 1035728 R 595495 CDS YP_006163303.1 386699466 12761147 complement(1037228..1038214) 1 NC_017660.1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component; putative transporter 1038214 yiaO 12761147 yiaO Escherichia coli KO11FL putative transporter YP_006163303.1 1037228 R 595495 CDS YP_006163304.1 386699467 12761148 complement(1038227..1039504) 1 NC_017660.1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component; L-dehydroascorbate transporter large permease subunit 1039504 yiaN 12761148 yiaN Escherichia coli KO11FL L-dehydroascorbate transporter large permease subunit YP_006163304.1 1038227 R 595495 CDS YP_006163305.1 386699468 12761149 complement(1039507..1039980) 1 NC_017660.1 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component; 2,3-diketo-L-gulonate TRAP transporter small permease 1039980 yiaM 12761149 yiaM Escherichia coli KO11FL 2,3-diketo-L-gulonate TRAP transporter small permease YP_006163305.1 1039507 R 595495 CDS YP_006163306.1 386699469 12761150 complement(1040098..1040565) 1 NC_017660.1 COG2731 Beta-galactosidase, beta subunit; yiaL; hypothetical protein 1040565 12761150 KO11_04840 Escherichia coli KO11FL hypothetical protein YP_006163306.1 1040098 R 595495 CDS YP_006163307.1 386699470 12761151 complement(1040577..1041575) 1 NC_017660.1 COG2055 Malate/L-lactate dehydrogenases; 2,3-diketo-L-gulonate reductase 1041575 yiaK 12761151 yiaK Escherichia coli KO11FL 2,3-diketo-L-gulonate reductase YP_006163307.1 1040577 R 595495 CDS YP_006163308.1 386699471 12761152 1041776..1042624 1 NC_017660.1 COG1414 Transcriptional regulator; putative DNA-binding transcriptional repressor 1042624 yiaJ 12761152 yiaJ Escherichia coli KO11FL putative DNA-binding transcriptional repressor YP_006163308.1 1041776 D 595495 CDS YP_006163309.1 386699472 12761153 1042726..1043199 1 NC_017660.1 COG1142 Fe-S-cluster-containing hydrogenase components 2; 4Fe-4S binding protein 1043199 ysaA 12761153 ysaA Escherichia coli KO11FL 4Fe-4S binding protein YP_006163309.1 1042726 D 595495 CDS YP_006163310.1 386699473 12761154 complement(1043350..1044603) 1 NC_017660.1 COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase; valine--pyruvate transaminase 1044603 avtA 12761154 avtA Escherichia coli KO11FL valine--pyruvate transaminase YP_006163310.1 1043350 R 595495 CDS YP_006163311.1 386699474 12761155 complement(1044781..1046811) 1 NC_017660.1 COG0366 Glycosidases; alpha-amylase 1046811 malS 12761155 malS Escherichia coli KO11FL alpha-amylase YP_006163311.1 1044781 R 595495 CDS YP_006163312.1 386699475 12761156 1047131..1047955 1 NC_017660.1 COG2992 Uncharacterized FlgJ-related protein; bax; hypothetical protein 1047955 12761156 KO11_04870 Escherichia coli KO11FL hypothetical protein YP_006163312.1 1047131 D 595495 CDS YP_006163313.1 386699476 12761157 complement(1048063..1049241) 1 NC_017660.1 COG1609 Transcriptional regulators; Xylose operon regulatory protein 1049241 xylR 12761157 xylR Escherichia coli KO11FL Xylose operon regulatory protein YP_006163313.1 1048063 R 595495 CDS YP_006163314.1 386699477 12761158 complement(1049319..1050500) 1 NC_017660.1 COG4214 ABC-type xylose transport system, permease component; Xylose transport system permease protein xylH 1050500 xylH 12761158 xylH Escherichia coli KO11FL Xylose transport system permease protein xylH YP_006163314.1 1049319 R 595495 CDS YP_006163315.1 386699478 12761159 complement(1050478..1052019) 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; xylose transporter ATP-binding subunit 1052019 xylG 12761159 xylG Escherichia coli KO11FL xylose transporter ATP-binding subunit YP_006163315.1 1050478 R 595495 CDS YP_006163316.1 386699479 12761160 complement(1052097..1053089) 1 NC_017660.1 COG4213 ABC-type xylose transport system, periplasmic component; D-xylose transporter subunit XylF 1053089 xylF 12761160 xylF Escherichia coli KO11FL D-xylose transporter subunit XylF YP_006163316.1 1052097 R 595495 CDS YP_006163317.1 386699480 12761161 1053455..1054777 1 NC_017660.1 COG2115 Xylose isomerase; xylose isomerase 1054777 xylA 12761161 xylA Escherichia coli KO11FL xylose isomerase YP_006163317.1 1053455 D 595495 CDS YP_006163318.1 386699481 12761162 1054849..1056303 1 NC_017660.1 COG1070 Sugar (pentulose and hexulose) kinases; xylulokinase 1056303 xylB 12761162 xylB Escherichia coli KO11FL xylulokinase YP_006163318.1 1054849 D 595495 CDS YP_006163319.1 386699482 12761163 1056472..1056813 1 NC_017660.1 COG4682 Predicted membrane protein; yiaB; hypothetical protein 1056813 12761163 KO11_04905 Escherichia coli KO11FL hypothetical protein YP_006163319.1 1056472 D 595495 CDS YP_006163320.1 386699483 12761164 1056859..1057296 1 NC_017660.1 COG4682 Predicted membrane protein; yiaA; hypothetical protein 1057296 12761164 KO11_04910 Escherichia coli KO11FL hypothetical protein YP_006163320.1 1056859 D 595495 CDS YP_006163321.1 386699484 12761165 complement(1057338..1058333) 1 NC_017660.1 COG3274 Uncharacterized protein conserved in bacteria; wecH; hypothetical protein 1058333 12761165 KO11_04915 Escherichia coli KO11FL hypothetical protein YP_006163321.1 1057338 R 595495 CDS YP_006163322.1 386699485 12761166 1058508..1058807 1 NC_017660.1 putative outer membrane lipoprotein 1058807 ysaB 12761166 ysaB Escherichia coli KO11FL putative outer membrane lipoprotein YP_006163322.1 1058508 D 595495 CDS YP_006163323.1 386699486 12761167 1058902..1059813 1 NC_017660.1 COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha 1059813 glyQ 12761167 glyQ Escherichia coli KO11FL glycyl-tRNA synthetase subunit alpha YP_006163323.1 1058902 D 595495 CDS YP_006163324.1 386699487 12761168 1059823..1061892 1 NC_017660.1 COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 1061892 glyS 12761168 glyS Escherichia coli KO11FL glycyl-tRNA synthetase subunit beta YP_006163324.1 1059823 D 595495 CDS YP_006163325.1 386699488 12761169 1062193..1062714 1 NC_017660.1 COG2963 Transposase and inactivated derivatives; IS150 putative transposase ORF1 1062714 12761169 KO11_04935 Escherichia coli KO11FL IS150 putative transposase ORF1 YP_006163325.1 1062193 D 595495 CDS YP_006163326.1 386699489 12761170 1062711..1063562 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; IS150 putative transposase ORF2 1063562 12761170 KO11_04940 Escherichia coli KO11FL IS150 putative transposase ORF2 YP_006163326.1 1062711 D 595495 CDS YP_006163327.1 386699490 12761171 1063664..1063900 1 NC_017660.1 small toxic polypeptide 1063900 hokA 12761171 hokA Escherichia coli KO11FL small toxic polypeptide YP_006163327.1 1063664 D 595495 CDS YP_006163328.1 386699491 12761172 complement(1064004..1064216) 1 NC_017660.1 COG1278 Cold shock proteins; RNA chaperone/anti-terminator 1064216 cspA 12761172 cspA Escherichia coli KO11FL RNA chaperone/anti-terminator YP_006163328.1 1064004 R 595495 CDS YP_006163329.1 386699492 12761173 complement(1064497..1064787) 1 NC_017660.1 COG2944 Predicted transcriptional regulator; putative transcriptional regulator 1064787 yiaG 12761173 yiaG Escherichia coli KO11FL putative transcriptional regulator YP_006163329.1 1064497 R 595495 CDS YP_006163330.1 386699493 12761174 1065221..1065931 1 NC_017660.1 yiaF; hypothetical protein 1065931 12761174 KO11_04955 Escherichia coli KO11FL hypothetical protein YP_006163330.1 1065221 D 595495 CDS YP_006163331.1 386699494 12761175 complement(1065981..1066955) 1 NC_017660.1 COG1052 Lactate dehydrogenase and related dehydrogenases; bifunctional glyoxylate/hydroxypyruvate reductase B 1066955 ghrB 12761175 ghrB Escherichia coli KO11FL bifunctional glyoxylate/hydroxypyruvate reductase B YP_006163331.1 1065981 R 595495 CDS YP_006163332.1 386699495 12761176 complement(1067059..1067718) 1 NC_017660.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; putative outer membrane lipoprotein 1067718 yiaD 12761176 yiaD Escherichia coli KO11FL putative outer membrane lipoprotein YP_006163332.1 1067059 R 595495 CDS YP_006163333.1 386699496 12761177 1067925..1070204 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; biotin sulfoxide reductase 1070204 bisC 12761177 bisC Escherichia coli KO11FL biotin sulfoxide reductase YP_006163333.1 1067925 D 595495 CDS YP_006163334.1 386699497 12761178 complement(1070173..1070613) 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase 1070613 yiaC 12761178 yiaC Escherichia coli KO11FL putative acetyltransferase YP_006163334.1 1070173 R 595495 CDS YP_006163335.1 386699498 12761179 complement(1070610..1071173) 1 NC_017660.1 COG2818 3-methyladenine DNA glycosylase; 3-methyladenine DNA glycosylase 1071173 tag 12761179 tag Escherichia coli KO11FL 3-methyladenine DNA glycosylase YP_006163335.1 1070610 R 595495 CDS YP_006163336.1 386699499 12761180 1071331..1072029 1 NC_017660.1 putative lipase 1072029 yhjY 12761180 yhjY Escherichia coli KO11FL putative lipase YP_006163336.1 1071331 D 595495 CDS YP_006163337.1 386699500 12761181 1072258..1073460 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; oxalate/formate antiporter protein 1073460 yhjX 12761181 yhjX Escherichia coli KO11FL oxalate/formate antiporter protein YP_006163337.1 1072258 D 595495 CDS YP_006163338.1 386699501 12761182 1073784..1074308 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; long polar fimbrial protein LpfA 1074308 lpfA1 12761182 lpfA1 Escherichia coli KO11FL long polar fimbrial protein LpfA YP_006163338.1 1073784 D 595495 CDS YP_006163339.1 386699502 12761183 1074392..1075078 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; long polar fimbrial chaperone LpfB 1075078 lpfB1 12761183 lpfB1 Escherichia coli KO11FL long polar fimbrial chaperone LpfB YP_006163339.1 1074392 D 595495 CDS YP_006163340.1 386699503 12761184 1075102..1077633 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; long polar fimbrial outer membrane usher protein LpfC 1077633 lpfC1 12761184 lpfC1 Escherichia coli KO11FL long polar fimbrial outer membrane usher protein LpfC YP_006163340.1 1075102 D 595495 CDS YP_006163341.1 386699504 12761185 1077644..1078699 1 NC_017660.1 long polar fimbrial protein LpfD 1078699 lpfD1 12761185 lpfD1 Escherichia coli KO11FL long polar fimbrial protein LpfD YP_006163341.1 1077644 D 595495 CDS YP_006163342.1 386699505 12761186 1078705..1079229 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; long polar fimbrial protein LpfE 1079229 lpfE1 12761186 lpfE1 Escherichia coli KO11FL long polar fimbrial protein LpfE YP_006163342.1 1078705 D 595495 CDS YP_006163343.1 386699506 12761187 1079482..1081173 1 NC_017660.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase; phosphoethanolamine transferase 1081173 eptB 12761187 eptB Escherichia coli KO11FL phosphoethanolamine transferase YP_006163343.1 1079482 D 595495 CDS YP_006163344.1 386699507 12761189 1082254..1083861 1 NC_017660.1 COG0747 ABC-type dipeptide transport system, periplasmic component; dipeptide transport protein 1083861 12761189 KO11_05025 Escherichia coli KO11FL dipeptide transport protein YP_006163344.1 1082254 D 595495 CDS YP_006163345.1 386699508 12761190 complement(1083924..1084151) 1 NC_017660.1 hypothetical protein 1084151 12761190 KO11_05030 Escherichia coli KO11FL hypothetical protein YP_006163345.1 1083924 R 595495 CDS YP_006163346.1 386699509 12761191 1084169..1085188 1 NC_017660.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transporter permease DppB 1085188 dppB 12761191 dppB Escherichia coli KO11FL dipeptide transporter permease DppB YP_006163346.1 1084169 D 595495 CDS YP_006163347.1 386699510 12761192 1085198..1086100 1 NC_017660.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transporter 1086100 dppC 12761192 dppC Escherichia coli KO11FL dipeptide transporter YP_006163347.1 1085198 D 595495 CDS YP_006163348.1 386699511 12761193 1086111..1087094 1 NC_017660.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; dipeptide transporter ATP-binding subunit 1087094 dppD 12761193 dppD Escherichia coli KO11FL dipeptide transporter ATP-binding subunit YP_006163348.1 1086111 D 595495 CDS YP_006163349.1 386699512 12761194 1087091..1088095 1 NC_017660.1 COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide transporter ATP-binding subunit 1088095 dppF 12761194 dppF Escherichia coli KO11FL dipeptide transporter ATP-binding subunit YP_006163349.1 1087091 D 595495 CDS YP_006163350.1 386699513 12761195 complement(1088125..1089396) 1 NC_017660.1 COG0814 Amino acid permeases; putative transporter 1089396 yhjV 12761195 yhjV Escherichia coli KO11FL putative transporter YP_006163350.1 1088125 R 595495 CDS YP_006163351.1 386699514 12761196 1089872..1089979 1 NC_017660.1 toxic polypeptide, small 1089979 ldrD3 12761196 ldrD3 Escherichia coli KO11FL toxic polypeptide, small YP_006163351.1 1089872 D 595495 CDS YP_006163352.1 386699515 12761197 1090355..1090462 1 NC_017660.1 toxic polypeptide, small 1090462 ldrD2 12761197 ldrD2 Escherichia coli KO11FL toxic polypeptide, small YP_006163352.1 1090355 D 595495 CDS YP_006163353.1 386699516 12761198 1090838..1090945 1 NC_017660.1 toxic polypeptide, small 1090945 ldrD1 12761198 ldrD1 Escherichia coli KO11FL toxic polypeptide, small YP_006163353.1 1090838 D 595495 CDS YP_006163354.1 386699517 12761199 complement(1091032..1092711) 1 NC_017660.1 putative inner membrane protein 1092711 bcsG 12761199 bcsG Escherichia coli KO11FL putative inner membrane protein YP_006163354.1 1091032 R 595495 CDS YP_006163355.1 386699518 12761200 complement(1092708..1092899) 1 NC_017660.1 bcsF; hypothetical protein 1092899 12761200 KO11_05080 Escherichia coli KO11FL hypothetical protein YP_006163355.1 1092708 R 595495 CDS YP_006163356.1 386699519 12761201 complement(1092896..1094401) 1 NC_017660.1 cellulose biosynthesis protein BcsE 1094401 bcsE 12761201 bcsE Escherichia coli KO11FL cellulose biosynthesis protein BcsE YP_006163356.1 1092896 R 595495 CDS YP_006163357.1 386699520 12761202 1094740..1094928 1 NC_017660.1 yhjR; hypothetical protein 1094928 12761202 KO11_05090 Escherichia coli KO11FL hypothetical protein YP_006163357.1 1094740 D 595495 CDS YP_006163358.1 386699521 12761203 1094940..1095692 1 NC_017660.1 COG1192 ATPases involved in chromosome partitioning; cell division protein 1095692 yhjQ 12761203 yhjQ Escherichia coli KO11FL cell division protein YP_006163358.1 1094940 D 595495 CDS YP_006163359.1 386699522 12761204 1095689..1098307 1 NC_017660.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; cellulose synthase catalytic subunit 1098307 bcsA 12761204 bcsA Escherichia coli KO11FL cellulose synthase catalytic subunit YP_006163359.1 1095689 D 595495 CDS YP_006163360.1 386699523 12761205 1098381..1100657 1 NC_017660.1 cellulose synthase regulator protein 1100657 bcsB 12761205 bcsB Escherichia coli KO11FL cellulose synthase regulator protein YP_006163360.1 1098381 D 595495 CDS YP_006163361.1 386699524 12761206 1100664..1101770 1 NC_017660.1 COG3405 Endoglucanase Y; endo-1,4-D-glucanase 1101770 bcsZ 12761206 bcsZ Escherichia coli KO11FL endo-1,4-D-glucanase YP_006163361.1 1100664 D 595495 CDS YP_006163362.1 386699525 12761207 1101752..1105225 1 NC_017660.1 COG0457 FOG: TPR repeat; cellulose synthase subunit BcsC 1105225 bcsC 12761207 bcsC Escherichia coli KO11FL cellulose synthase subunit BcsC YP_006163362.1 1101752 D 595495 CDS YP_006163363.1 386699526 12761208 1105346..1107295 1 NC_017660.1 COG2199 FOG: GGDEF domain; putative diguanylate cyclase 1107295 yhjK 12761208 yhjK Escherichia coli KO11FL putative diguanylate cyclase YP_006163363.1 1105346 D 595495 CDS YP_006163364.1 386699527 12761209 1107478..1108764 1 NC_017660.1 COG1301 Na+/H+-dicarboxylate symporters; C4-dicarboxylate transporter DctA 1108764 dctA 12761209 dctA Escherichia coli KO11FL C4-dicarboxylate transporter DctA YP_006163364.1 1107478 D 595495 CDS YP_006163365.1 386699528 12761210 1108985..1110481 1 NC_017660.1 COG0612 Predicted Zn-dependent peptidases; putative Zn-dependent peptidase 1110481 yhjJ 12761210 yhjJ Escherichia coli KO11FL putative Zn-dependent peptidase YP_006163365.1 1108985 D 595495 CDS YP_006163366.1 386699529 12761211 complement(1110577..1111506) 1 NC_017660.1 COG0524 Sugar kinases, ribokinase family; 2-dehydro-3-deoxygluconokinase 1111506 kdgK 12761211 kdgK Escherichia coli KO11FL 2-dehydro-3-deoxygluconokinase YP_006163366.1 1110577 R 595495 CDS YP_006163367.1 386699530 12761212 1111738..1112505 1 NC_017660.1 COG2200 FOG: EAL domain; cyclic-di-GMP phosphodiesterase 1112505 yhjH 12761212 yhjH Escherichia coli KO11FL cyclic-di-GMP phosphodiesterase YP_006163367.1 1111738 D 595495 CDS YP_006163368.1 386699531 12761213 1112575..1114635 1 NC_017660.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis; putative outer membrane biogenesis protein 1114635 yhjG 12761213 yhjG Escherichia coli KO11FL putative outer membrane biogenesis protein YP_006163368.1 1112575 D 595495 CDS YP_006163369.1 386699532 12761214 complement(1114869..1116191) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 1116191 yhjE 12761214 yhjE Escherichia coli KO11FL putative transporter YP_006163369.1 1114869 R 595495 CDS YP_006163370.1 386699533 12761215 complement(1116602..1117615) 1 NC_017660.1 COG1295 Predicted membrane protein; putative ribonuclease 1117615 yhjD 12761215 yhjD Escherichia coli KO11FL putative ribonuclease YP_006163370.1 1116602 R 595495 CDS YP_006163371.1 386699534 12761216 complement(1117664..1118635) 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 1118635 yhjC 12761216 yhjC Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163371.1 1117664 R 595495 CDS YP_006163372.1 386699535 12761217 1119083..1119685 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative DNA-binding response regulator in two-component regulatory system 1119685 yhjB 12761217 yhjB Escherichia coli KO11FL putative DNA-binding response regulator in two-component regulatory system YP_006163372.1 1119083 D 595495 CDS YP_006163373.1 386699536 12761218 complement(1119736..1121385) 1 NC_017660.1 COG1626 Neutral trehalase; trehalase 1121385 treF 12761218 treF Escherichia coli KO11FL trehalase YP_006163373.1 1119736 R 595495 CDS YP_006163374.1 386699537 12761219 1121790..1123187 1 NC_017660.1 COG1858 Cytochrome c peroxidase; cytochrome C peroxidase 1123187 yhjA 12761219 yhjA Escherichia coli KO11FL cytochrome C peroxidase YP_006163374.1 1121790 D 595495 CDS YP_006163375.1 386699538 12761220 1123398..1124798 1 NC_017660.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins; glutamate decarboxylase 1124798 gadA 12761220 gadA Escherichia coli KO11FL glutamate decarboxylase YP_006163375.1 1123398 D 595495 CDS YP_006163376.1 386699539 12761221 1125168..1125992 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator GadX 1125992 gadX 12761221 gadX Escherichia coli KO11FL DNA-binding transcriptional regulator GadX YP_006163376.1 1125168 D 595495 CDS YP_006163377.1 386699540 12761222 1126360..1127088 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator GadW 1127088 gadW 12761222 gadW Escherichia coli KO11FL DNA-binding transcriptional activator GadW YP_006163377.1 1126360 D 595495 CDS YP_006163378.1 386699541 12761223 complement(1127451..1130564) 1 NC_017660.1 COG0841 Cation/multidrug efflux pump; multidrug transporter MdtF, RpoS-dependent 1130564 mdtF 12761223 mdtF Escherichia coli KO11FL multidrug transporter MdtF, RpoS-dependent YP_006163378.1 1127451 R 595495 CDS YP_006163379.1 386699542 12761224 complement(1130589..1131746) 1 NC_017660.1 COG0845 Membrane-fusion protein; multidrug efflux system protein MdtE 1131746 mdtE 12761224 mdtE Escherichia coli KO11FL multidrug efflux system protein MdtE YP_006163379.1 1130589 R 595495 CDS YP_006163380.1 386699543 12761225 complement(1132085..1132612) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative DNA-binding transcriptional activator 1132612 gadE 12761225 gadE Escherichia coli KO11FL putative DNA-binding transcriptional activator YP_006163380.1 1132085 R 595495 CDS YP_006163381.1 386699544 12761226 complement(1133411..1133983) 1 NC_017660.1 COG3247 Uncharacterized conserved protein; acid-resistance membrane protein 1133983 hdeD 12761226 hdeD Escherichia coli KO11FL acid-resistance membrane protein YP_006163381.1 1133411 R 595495 CDS YP_006163382.1 386699545 12761227 1134238..1134570 1 NC_017660.1 acid-resistance protein 1134570 hdeA 12761227 hdeA Escherichia coli KO11FL acid-resistance protein YP_006163382.1 1134238 D 595495 CDS YP_006163383.1 386699546 12761228 1134686..1135012 1 NC_017660.1 acid-resistance protein 1135012 hdeB 12761228 hdeB Escherichia coli KO11FL acid-resistance protein YP_006163383.1 1134686 D 595495 CDS YP_006163384.1 386699547 12761229 1135076..1135723 1 NC_017660.1 COG1285 Uncharacterized membrane protein; putative Mg(2+) transport ATPase 1135723 yhiD 12761229 yhiD Escherichia coli KO11FL putative Mg(2+) transport ATPase YP_006163384.1 1135076 D 595495 CDS YP_006163385.1 386699548 12761230 complement(1135765..1136295) 1 NC_017660.1 COG0055 F0F1-type ATP synthase, beta subunit; putative DNA-binding transcriptional regulator 1136295 dctR 12761230 dctR Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163385.1 1135765 R 595495 CDS YP_006163386.1 386699549 12761231 complement(1136451..1137017) 1 NC_017660.1 COG3065 Starvation-inducible outer membrane lipoprotein; outer membrane lipoprotein 1137017 slp 12761231 slp Escherichia coli KO11FL outer membrane lipoprotein YP_006163386.1 1136451 R 595495 CDS YP_006163387.1 386699550 12761232 1137517..1138725 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 1138725 12761232 KO11_05245 Escherichia coli KO11FL IS10 transposase YP_006163387.1 1137517 D 595495 CDS YP_006163388.1 386699551 12761233 complement(1138979..1139824) 1 NC_017660.1 hypothetical protein 1139824 12761233 KO11_05250 Escherichia coli KO11FL hypothetical protein YP_006163388.1 1138979 R 595495 CDS YP_006163389.1 386699552 12761234 complement(1140405..1141406) 1 NC_017660.1 COG0701 Predicted permeases; hypothetical protein 1141406 12761234 KO11_05255 Escherichia coli KO11FL hypothetical protein YP_006163389.1 1140405 R 595495 CDS YP_006163390.1 386699553 12761235 1141514..1141810 1 NC_017660.1 COG0640 Predicted transcriptional regulators; hypothetical protein 1141810 12761235 KO11_05260 Escherichia coli KO11FL hypothetical protein YP_006163390.1 1141514 D 595495 CDS YP_006163391.1 386699554 12761236 complement(1141938..1142378) 1 NC_017660.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family; arsenate reductase 1142378 arsC 12761236 arsC Escherichia coli KO11FL arsenate reductase YP_006163391.1 1141938 R 595495 CDS YP_006163392.1 386699555 12761237 complement(1142391..1143680) 1 NC_017660.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; arsenical pump membrane protein 1143680 arsB 12761237 arsB Escherichia coli KO11FL arsenical pump membrane protein YP_006163392.1 1142391 R 595495 CDS YP_006163393.1 386699556 12761238 complement(1143734..1144087) 1 NC_017660.1 COG0640 Predicted transcriptional regulators; DNA-binding transcriptional repressor ArsR 1144087 arsR 12761238 arsR Escherichia coli KO11FL DNA-binding transcriptional repressor ArsR YP_006163393.1 1143734 R 595495 CDS YP_006163394.1 386699557 12761239 complement(1144964..1146316) 1 NC_017660.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; glutathione reductase 1146316 gor 12761239 gor Escherichia coli KO11FL glutathione reductase YP_006163394.1 1144964 R 595495 CDS YP_006163395.1 386699558 12761240 complement(1146388..1147230) 1 NC_017660.1 COG2961 Protein involved in catabolism of external DNA; putative DNA processing protein 1147230 yhiR 12761240 yhiR Escherichia coli KO11FL putative DNA processing protein YP_006163395.1 1146388 R 595495 CDS YP_006163396.1 386699559 12761241 1147433..1149475 1 NC_017660.1 COG0339 Zn-dependent oligopeptidases; oligopeptidase A 1149475 prlC 12761241 prlC Escherichia coli KO11FL oligopeptidase A YP_006163396.1 1147433 D 595495 CDS YP_006163397.1 386699560 12761242 1149483..1150235 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; putative methyltransferase 1150235 yhiQ 12761242 yhiQ Escherichia coli KO11FL putative methyltransferase YP_006163397.1 1149483 D 595495 CDS YP_006163398.1 386699561 12761243 complement(1150284..1151753) 1 NC_017660.1 COG3104 Dipeptide/tripeptide permease; dipeptide/tripeptide permease B 1151753 dtpB 12761243 dtpB Escherichia coli KO11FL dipeptide/tripeptide permease B YP_006163398.1 1150284 R 595495 CDS YP_006163399.1 386699562 12761244 complement(1152071..1152505) 1 NC_017660.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress global response regulator UspA 1152505 uspA 12761244 uspA Escherichia coli KO11FL universal stress global response regulator UspA YP_006163399.1 1152071 R 595495 CDS YP_006163400.1 386699563 12761245 1152896..1153231 1 NC_017660.1 universal stress protein UspB 1153231 uspB 12761245 uspB Escherichia coli KO11FL universal stress protein UspB YP_006163400.1 1152896 D 595495 CDS YP_006163401.1 386699564 12761246 complement(1153302..1154801) 1 NC_017660.1 COG0306 Phosphate/sulphate permeases; Low-affinity inorganic phosphate transporter 1 1154801 ptiA 12761246 ptiA Escherichia coli KO11FL Low-affinity inorganic phosphate transporter 1 YP_006163401.1 1153302 R 595495 CDS YP_006163402.1 386699565 12761247 1155033..1156235 1 NC_017660.1 COG2081 Predicted flavoproteins; putative oxidoreductase 1156235 yhiN 12761247 yhiN Escherichia coli KO11FL putative oxidoreductase YP_006163402.1 1155033 D 595495 CDS YP_006163403.1 386699566 12761248 1156370..1156471 1 NC_017660.1 hypothetical protein 1156471 12761248 KO11_05325 Escherichia coli KO11FL hypothetical protein YP_006163403.1 1156370 D 595495 CDS YP_006163404.1 386699567 12761249 complement(1156551..1157603) 1 NC_017660.1 Inner membrane protein yhiM 1157603 yhiM 12761249 yhiM Escherichia coli KO11FL Inner membrane protein yhiM YP_006163404.1 1156551 R 595495 CDS YP_006163405.1 386699568 12761250 1157987..1159576 1 NC_017660.1 yhiL; hypothetical protein 1159576 12761250 KO11_05335 Escherichia coli KO11FL hypothetical protein YP_006163405.1 1157987 D 595495 CDS YP_006163406.1 386699569 12761251 1159838..1161460 1 NC_017660.1 hypothetical protein 1161460 12761251 KO11_05340 Escherichia coli KO11FL hypothetical protein YP_006163406.1 1159838 D 595495 CDS YP_006163407.1 386699570 12761252 1161826..1162893 1 NC_017660.1 COG0845 Membrane-fusion protein; HlyD family secretion protein 1162893 yhiI 12761252 yhiI Escherichia coli KO11FL HlyD family secretion protein YP_006163407.1 1161826 D 595495 CDS YP_006163408.1 386699571 12761253 1162890..1165625 1 NC_017660.1 COG1131 ABC-type multidrug transport system, ATPase component; putative ABC transporter ATP-binding protein 1165625 rbbA 12761253 rbbA Escherichia coli KO11FL putative ABC transporter ATP-binding protein YP_006163408.1 1162890 D 595495 CDS YP_006163409.1 386699572 12761254 1165625..1166749 1 NC_017660.1 COG0842 ABC-type multidrug transport system, permease component; putative transport protein 1166749 yhhJ 12761254 yhhJ Escherichia coli KO11FL putative transport protein YP_006163409.1 1165625 D 595495 CDS YP_006163410.1 386699573 12761255 1167080..1167439 1 NC_017660.1 COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters; HicB family protein 1167439 12761255 KO11_05360 Escherichia coli KO11FL HicB family protein YP_006163410.1 1167080 D 595495 CDS YP_006163411.1 386699574 12761256 complement(1167559..1167960) 1 NC_017660.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator 1167960 nikR 12761256 nikR Escherichia coli KO11FL nickel responsive regulator YP_006163411.1 1167559 R 595495 CDS YP_006163412.1 386699575 12761257 complement(1167966..1168772) 1 NC_017660.1 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; nickel transporter ATP-binding protein NikE 1168772 nikE 12761257 nikE Escherichia coli KO11FL nickel transporter ATP-binding protein NikE YP_006163412.1 1167966 R 595495 CDS YP_006163413.1 386699576 12761258 complement(1168769..1169533) 1 NC_017660.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; nickel transporter ATP-binding protein NikD 1169533 nikD 12761258 nikD Escherichia coli KO11FL nickel transporter ATP-binding protein NikD YP_006163413.1 1168769 R 595495 CDS YP_006163414.1 386699577 12761259 complement(1169533..1170366) 1 NC_017660.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; nickel transporter permease NikC 1170366 nikC 12761259 nikC Escherichia coli KO11FL nickel transporter permease NikC YP_006163414.1 1169533 R 595495 CDS YP_006163415.1 386699578 12761260 complement(1170363..1171307) 1 NC_017660.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; nickel transporter permease NikB 1171307 nikB 12761260 nikB Escherichia coli KO11FL nickel transporter permease NikB YP_006163415.1 1170363 R 595495 CDS YP_006163416.1 386699579 12761261 complement(1171307..1172881) 1 NC_017660.1 COG0747 ABC-type dipeptide transport system, periplasmic component; periplasmic binding protein for nickel NikA 1172881 nikA 12761261 nikA Escherichia coli KO11FL periplasmic binding protein for nickel NikA YP_006163416.1 1171307 R 595495 CDS YP_006163417.1 386699580 12761262 complement(1172992..1173579) 1 NC_017660.1 COG2091 Phosphopantetheinyl transferase; holo-(acyl carrier protein) synthase 2 1173579 acpT 12761262 acpT Escherichia coli KO11FL holo-(acyl carrier protein) synthase 2 YP_006163417.1 1172992 R 595495 CDS YP_006163418.1 386699581 12761263 complement(1173634..1174683) 1 NC_017660.1 COG0628 Predicted permease; yhhT; hypothetical protein 1174683 12761263 KO11_05400 Escherichia coli KO11FL hypothetical protein YP_006163418.1 1173634 R 595495 CDS YP_006163419.1 386699582 12761264 1174815..1176032 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 1176032 yhhS 12761264 yhhS Escherichia coli KO11FL major facilitator superfamily transporter YP_006163419.1 1174815 D 595495 CDS YP_006163420.1 386699583 12761265 complement(1176036..1176593) 1 NC_017660.1 dcrB; hypothetical protein 1176593 12761265 KO11_05410 Escherichia coli KO11FL hypothetical protein YP_006163420.1 1176036 R 595495 CDS YP_006163421.1 386699584 12761266 complement(1176666..1177331) 1 NC_017660.1 COG1738 Uncharacterized conserved protein; yhhQ; hypothetical protein 1177331 12761266 KO11_05415 Escherichia coli KO11FL hypothetical protein YP_006163421.1 1176666 R 595495 CDS YP_006163422.1 386699585 12761267 1177552..1177797 1 NC_017660.1 COG0425 Predicted redox protein, regulator of disulfide bond formation; sulfur transfer protein SirA 1177797 sirA 12761267 sirA Escherichia coli KO11FL sulfur transfer protein SirA YP_006163422.1 1177552 D 595495 CDS YP_006163423.1 386699586 12761268 complement(1177899..1180097) 1 NC_017660.1 COG2217 Cation transport ATPase; zinc/cadmium/mercury/lead-transporting ATPase 1180097 zntA 12761268 zntA Escherichia coli KO11FL zinc/cadmium/mercury/lead-transporting ATPase YP_006163423.1 1177899 R 595495 CDS YP_006163424.1 386699587 12761269 complement(1180171..1180797) 1 NC_017660.1 COG3714 Predicted membrane protein; yhhN; hypothetical protein 1180797 12761269 KO11_05430 Escherichia coli KO11FL hypothetical protein YP_006163424.1 1180171 R 595495 CDS YP_006163425.1 386699588 12761270 1180938..1181297 1 NC_017660.1 hypothetical protein 1181297 12761270 KO11_05435 Escherichia coli KO11FL hypothetical protein YP_006163425.1 1180938 D 595495 CDS YP_006163426.1 386699589 12761271 complement(1181300..1181569) 1 NC_017660.1 COG3776 Predicted membrane protein; yhhL; hypothetical protein 1181569 12761271 KO11_05440 Escherichia coli KO11FL hypothetical protein YP_006163426.1 1181300 R 595495 CDS YP_006163427.1 386699590 12761272 complement(1181559..1182155) 1 NC_017660.1 COG0742 N6-adenine-specific methylase; 16S rRNA m(2)G966-methyltransferase 1182155 rsmD 12761272 rsmD Escherichia coli KO11FL 16S rRNA m(2)G966-methyltransferase YP_006163427.1 1181559 R 595495 CDS YP_006163428.1 386699591 12761273 1182305..1183798 1 NC_017660.1 COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 1183798 ftsY 12761273 ftsY Escherichia coli KO11FL signal recognition particle-docking protein FtsY YP_006163428.1 1182305 D 595495 CDS YP_006163429.1 386699592 12761274 1183801..1184469 1 NC_017660.1 COG2884 Predicted ATPase involved in cell division; cell division protein FtsE 1184469 ftsE 12761274 ftsE Escherichia coli KO11FL cell division protein FtsE YP_006163429.1 1183801 D 595495 CDS YP_006163430.1 386699593 12761275 1184462..1185520 1 NC_017660.1 COG2177 Cell division protein; cell division ABC transporter subunit FtsX 1185520 ftsX 12761275 ftsX Escherichia coli KO11FL cell division ABC transporter subunit FtsX YP_006163430.1 1184462 D 595495 CDS YP_006163431.1 386699594 12761276 1185765..1186619 1 NC_017660.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase factor sigma-32 1186619 rpoH 12761276 rpoH Escherichia coli KO11FL RNA polymerase factor sigma-32 YP_006163431.1 1185765 D 595495 CDS YP_006163432.1 386699595 12761277 1186890..1187993 1 NC_017660.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; leucine ABC transporter subunit substrate-binding protein LivK 1187993 livJ 12761277 livJ Escherichia coli KO11FL leucine ABC transporter subunit substrate-binding protein LivK YP_006163432.1 1186890 D 595495 CDS YP_006163433.1 386699596 12761278 1188143..1188409 1 NC_017660.1 COG4453 Uncharacterized protein conserved in bacteria; hypothetical protein 1188409 12761278 KO11_05475 Escherichia coli KO11FL hypothetical protein YP_006163433.1 1188143 D 595495 CDS YP_006163434.1 386699597 12761279 1188416..1188943 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 1188943 12761279 KO11_05480 Escherichia coli KO11FL hypothetical protein YP_006163434.1 1188416 D 595495 CDS YP_006163435.1 386699598 12761280 complement(1188940..1189323) 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; yhhK; hypothetical protein 1189323 12761280 KO11_05485 Escherichia coli KO11FL hypothetical protein YP_006163435.1 1188940 R 595495 CDS YP_006163436.1 386699599 12761281 1189747..1190856 1 NC_017660.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; leucine ABC transporter subunit substrate-binding protein LivK 1190856 livK 12761281 livK Escherichia coli KO11FL leucine ABC transporter subunit substrate-binding protein LivK YP_006163436.1 1189747 D 595495 CDS YP_006163437.1 386699600 12761282 1190904..1191830 1 NC_017660.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components; branched-chain amino acid transporter permease subunit LivH 1191830 livH 12761282 livH Escherichia coli KO11FL branched-chain amino acid transporter permease subunit LivH YP_006163437.1 1190904 D 595495 CDS YP_006163438.1 386699601 12761283 1191827..1193104 1 NC_017660.1 COG4177 ABC-type branched-chain amino acid transport system, permease component; leucine/isoleucine/valine transporter permease subunit 1193104 livM 12761283 livM Escherichia coli KO11FL leucine/isoleucine/valine transporter permease subunit YP_006163438.1 1191827 D 595495 CDS YP_006163439.1 386699602 12761284 1193101..1193868 1 NC_017660.1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; leucine/isoleucine/valine transporter ATP-binding subunit 1193868 livG 12761284 livG Escherichia coli KO11FL leucine/isoleucine/valine transporter ATP-binding subunit YP_006163439.1 1193101 D 595495 CDS YP_006163440.1 386699603 12761285 1193882..1194583 1 NC_017660.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; leucine/isoleucine/valine transporter ATP-binding subunit 1194583 livF 12761285 livF Escherichia coli KO11FL leucine/isoleucine/valine transporter ATP-binding subunit YP_006163440.1 1193882 D 595495 CDS YP_006163441.1 386699604 12761286 1194980..1196296 1 NC_017660.1 COG1653 ABC-type sugar transport system, periplasmic component; glycerol-3-phosphate transporter periplasmic binding protein 1196296 ugpB 12761286 ugpB Escherichia coli KO11FL glycerol-3-phosphate transporter periplasmic binding protein YP_006163441.1 1194980 D 595495 CDS YP_006163442.1 386699605 12761287 1196394..1197281 1 NC_017660.1 COG1175 ABC-type sugar transport systems, permease components; glycerol-3-phosphate transporter permease 1197281 ugpA 12761287 ugpA Escherichia coli KO11FL glycerol-3-phosphate transporter permease YP_006163442.1 1196394 D 595495 CDS YP_006163443.1 386699606 12761288 1197278..1198123 1 NC_017660.1 COG0395 ABC-type sugar transport system, permease component; glycerol-3-phosphate transporter membrane protein 1198123 ugpE 12761288 ugpE Escherichia coli KO11FL glycerol-3-phosphate transporter membrane protein YP_006163443.1 1197278 D 595495 CDS YP_006163444.1 386699607 12761289 1198125..1199195 1 NC_017660.1 COG3839 ABC-type sugar transport systems, ATPase components; glycerol-3-phosphate transporter ATP-binding subunit 1199195 ugpC 12761289 ugpC Escherichia coli KO11FL glycerol-3-phosphate transporter ATP-binding subunit YP_006163444.1 1198125 D 595495 CDS YP_006163445.1 386699608 12761290 1199192..1199935 1 NC_017660.1 COG0584 Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase 1199935 ugpQ 12761290 ugpQ Escherichia coli KO11FL glycerophosphodiester phosphodiesterase YP_006163445.1 1199192 D 595495 CDS YP_006163446.1 386699609 12761291 complement(1199922..1200362) 1 NC_017660.1 yhhA; hypothetical protein 1200362 12761291 KO11_05540 Escherichia coli KO11FL hypothetical protein YP_006163446.1 1199922 R 595495 CDS YP_006163447.1 386699610 12761292 1200482..1202224 1 NC_017660.1 COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase 1202224 ggt 12761292 ggt Escherichia coli KO11FL gamma-glutamyltranspeptidase YP_006163447.1 1200482 D 595495 CDS YP_006163448.1 386699611 12761293 complement(1202262..1202546) 1 NC_017660.1 yrhB; hypothetical protein 1202546 12761293 KO11_05550 Escherichia coli KO11FL hypothetical protein YP_006163448.1 1202262 R 595495 CDS YP_006163449.1 386699612 12761294 complement(1202746..1202901) 1 NC_017660.1 yrhD; hypothetical protein 1202901 12761294 KO11_05552 Escherichia coli KO11FL hypothetical protein YP_006163449.1 1202746 R 595495 CDS YP_006163450.1 386699613 12761295 complement(1202996..1203490) 1 NC_017660.1 yrhA; hypothetical protein 1203490 12761295 KO11_05555 Escherichia coli KO11FL hypothetical protein YP_006163450.1 1202996 R 595495 CDS YP_006163451.1 386699614 12761296 complement(1203487..1204665) 1 NC_017660.1 COG3157 Hemolysin-coregulated protein (uncharacterized); yhhZ; hypothetical protein 1204665 12761296 KO11_05560 Escherichia coli KO11FL hypothetical protein YP_006163451.1 1203487 R 595495 CDS YP_006163452.1 386699615 12761297 complement(1204902..1205390) 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase YhhY 1205390 yhhY 12761297 yhhY Escherichia coli KO11FL putative acetyltransferase YhhY YP_006163452.1 1204902 R 595495 CDS YP_006163453.1 386699616 12761298 1205722..1206759 1 NC_017660.1 COG0673 Predicted dehydrogenases and related proteins; putative oxidoreductase 1206759 yhhX 12761298 yhhX Escherichia coli KO11FL putative oxidoreductase YP_006163453.1 1205722 D 595495 CDS YP_006163454.1 386699617 12761299 1206882..1207577 1 NC_017660.1 COG1741 Pirin-related protein; protein yhhW 1207577 yhhW 12761299 yhhW Escherichia coli KO11FL protein yhhW YP_006163454.1 1206882 D 595495 CDS YP_006163455.1 386699618 12761300 1207801..1208796 1 NC_017660.1 COG1609 Transcriptional regulators; gluconate operon transcriptional regulator 1208796 gntR 12761300 gntR Escherichia coli KO11FL gluconate operon transcriptional regulator YP_006163455.1 1207801 D 595495 CDS YP_006163456.1 386699619 12761301 1208974..1209462 1 NC_017660.1 COG3265 Gluconate kinase; gluconate kinase 1209462 gntK 12761301 gntK Escherichia coli KO11FL gluconate kinase YP_006163456.1 1208974 D 595495 CDS YP_006163457.1 386699620 12761302 1209466..1210806 1 NC_017660.1 COG2610 H+/gluconate symporter and related permeases; low affinity gluconate transporter 1210806 gntU 12761302 gntU Escherichia coli KO11FL low affinity gluconate transporter YP_006163457.1 1209466 D 595495 CDS YP_006163458.1 386699621 12761303 complement(1210863..1211456) 1 NC_017660.1 COG2095 Multiple antibiotic transporter; putative antibiotic transporter 1211456 yhgN 12761303 yhgN Escherichia coli KO11FL putative antibiotic transporter YP_006163458.1 1210863 R 595495 CDS YP_006163459.1 386699622 12761304 1211648..1212751 1 NC_017660.1 COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1212751 asd 12761304 asd Escherichia coli KO11FL aspartate-semialdehyde dehydrogenase YP_006163459.1 1211648 D 595495 CDS YP_006163460.1 386699623 12761305 1213024..1215210 1 NC_017660.1 COG0296 1,4-alpha-glucan branching enzyme; glycogen branching protein 1215210 glgB 12761305 glgB Escherichia coli KO11FL glycogen branching protein YP_006163460.1 1213024 D 595495 CDS YP_006163461.1 386699624 12761306 1215207..1217180 1 NC_017660.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; glycogen debranching protein 1217180 glgX 12761306 glgX Escherichia coli KO11FL glycogen debranching protein YP_006163461.1 1215207 D 595495 CDS YP_006163462.1 386699625 12761307 1217198..1218493 1 NC_017660.1 COG0448 ADP-glucose pyrophosphorylase; glucose-1-phosphate adenylyltransferase 1218493 glgC 12761307 glgC Escherichia coli KO11FL glucose-1-phosphate adenylyltransferase YP_006163462.1 1217198 D 595495 CDS YP_006163463.1 386699626 12761308 1218493..1219926 1 NC_017660.1 COG0297 Glycogen synthase; glycogen synthase 1219926 glgA 12761308 glgA Escherichia coli KO11FL glycogen synthase YP_006163463.1 1218493 D 595495 CDS YP_006163464.1 386699627 12761309 1219945..1222392 1 NC_017660.1 COG0058 Glucan phosphorylase; glycogen phosphorylase 1222392 glgP 12761309 glgP Escherichia coli KO11FL glycogen phosphorylase YP_006163464.1 1219945 D 595495 CDS YP_006163465.1 386699628 12761310 1222520..1224025 1 NC_017660.1 COG0226 ABC-type phosphate transport system, periplasmic component; phosphate transport system substrate-binding protein 1224025 12761310 KO11_05630 Escherichia coli KO11FL phosphate transport system substrate-binding protein YP_006163465.1 1222520 D 595495 CDS YP_006163466.1 386699629 12761311 1224040..1224750 1 NC_017660.1 hypothetical protein 1224750 12761311 KO11_05635 Escherichia coli KO11FL hypothetical protein YP_006163466.1 1224040 D 595495 CDS YP_006163467.1 386699630 12761312 1224753..1225520 1 NC_017660.1 hypothetical protein 1225520 12761312 KO11_05640 Escherichia coli KO11FL hypothetical protein YP_006163467.1 1224753 D 595495 CDS YP_006163468.1 386699631 12761313 1225523..1225999 1 NC_017660.1 truncated by IS10 insertion; hypothetical protein 1225999 12761313 KO11_05645 Escherichia coli KO11FL hypothetical protein YP_006163468.1 1225523 D 595495 CDS YP_006163469.1 386699632 12761314 complement(1226009..1227217) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 1227217 12761314 KO11_05650 Escherichia coli KO11FL IS10 transposase YP_006163469.1 1226009 R 595495 CDS YP_006163470.1 386699633 12761315 complement(1227520..1229025) 1 NC_017660.1 COG0578 Glycerol-3-phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase 1229025 glpD 12761315 glpD Escherichia coli KO11FL glycerol-3-phosphate dehydrogenase YP_006163470.1 1227520 R 595495 CDS YP_006163471.1 386699634 12761316 1229215..1229541 1 NC_017660.1 COG0607 Rhodanese-related sulfurtransferase; thiosulfate sulfurtransferase 1229541 glpE 12761316 glpE Escherichia coli KO11FL thiosulfate sulfurtransferase YP_006163471.1 1229215 D 595495 CDS YP_006163472.1 386699635 12761317 1229586..1230416 1 NC_017660.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); intramembrane serine protease GlpG 1230416 glpG 12761317 glpG Escherichia coli KO11FL intramembrane serine protease GlpG YP_006163472.1 1229586 D 595495 CDS YP_006163473.1 386699636 12761318 1230433..1231191 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor GlpR 1231191 glpR 12761318 glpR Escherichia coli KO11FL DNA-binding transcriptional repressor GlpR YP_006163473.1 1230433 D 595495 CDS YP_006163474.1 386699637 12761319 complement(1231173..1232771) 1 NC_017660.1 COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain; sigma 54-dependent transcriptional regulator of rtcBA expression 1232771 trcR 12761319 trcR Escherichia coli KO11FL sigma 54-dependent transcriptional regulator of rtcBA expression YP_006163474.1 1231173 R 595495 CDS YP_006163475.1 386699638 12761320 1232960..1234186 1 NC_017660.1 COG1690 Uncharacterized conserved protein; rtcB; hypothetical protein 1234186 12761320 KO11_05680 Escherichia coli KO11FL hypothetical protein YP_006163475.1 1232960 D 595495 CDS YP_006163476.1 386699639 12761321 1234187..1235206 1 NC_017660.1 COG0430 RNA 3-terminal phosphate cyclase; RNA 3'-terminal-phosphate cyclase 1235206 rtcA 12761321 rtcA Escherichia coli KO11FL RNA 3'-terminal-phosphate cyclase YP_006163476.1 1234187 D 595495 CDS YP_006163477.1 386699640 12761322 complement(1235249..1237954) 1 NC_017660.1 COG2909 ATP-dependent transcriptional regulator; transcriptional regulator MalT 1237954 malT 12761322 malT Escherichia coli KO11FL transcriptional regulator MalT YP_006163477.1 1235249 R 595495 CDS YP_006163478.1 386699641 12761323 1238566..1238757 1 NC_017660.1 COG0058 Glucan phosphorylase; truncated by stop codon; maltodextrin phosphorylase 1238757 malP_2 12761323 malP_2 Escherichia coli KO11FL maltodextrin phosphorylase YP_006163478.1 1238566 D 595495 CDS YP_006163479.1 386699642 12761324 1238764..1240959 1 NC_017660.1 COG0058 Glucan phosphorylase; maltodextrin phosphorylase 1240959 malP_1 12761324 malP_1 Escherichia coli KO11FL maltodextrin phosphorylase YP_006163479.1 1238764 D 595495 CDS YP_006163480.1 386699643 12761325 1240969..1243053 1 NC_017660.1 COG1640 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 1243053 malQ 12761325 malQ Escherichia coli KO11FL 4-alpha-glucanotransferase YP_006163480.1 1240969 D 595495 CDS YP_006163481.1 386699644 12761326 complement(1243098..1244414) 1 NC_017660.1 COG2610 H+/gluconate symporter and related permeases; high-affinity gluconate transporter 1244414 gntT 12761326 gntT Escherichia coli KO11FL high-affinity gluconate transporter YP_006163481.1 1243098 R 595495 CDS YP_006163482.1 386699645 12761327 complement(1244775..1245350) 1 NC_017660.1 COG0316 Uncharacterized conserved protein; Fe/S biogenesis protein NfuA 1245350 nfuA 12761327 nfuA Escherichia coli KO11FL Fe/S biogenesis protein NfuA YP_006163482.1 1244775 R 595495 CDS YP_006163483.1 386699646 12761328 complement(1245409..1246092) 1 NC_017660.1 COG1040 Predicted amidophosphoribosyltransferases; DNA utilization protein GntX 1246092 gntX 12761328 gntX Escherichia coli KO11FL DNA utilization protein GntX YP_006163483.1 1245409 R 595495 CDS YP_006163484.1 386699647 12761329 1246130..1246900 1 NC_017660.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); carboxylesterase BioH 1246900 bioH 12761329 bioH Escherichia coli KO11FL carboxylesterase BioH YP_006163484.1 1246130 D 595495 CDS YP_006163485.1 386699648 12761331 complement(1248010..1248246) 1 NC_017660.1 ferrous iron transport protein FeoC 1248246 feoC 12761331 feoC Escherichia coli KO11FL ferrous iron transport protein FeoC YP_006163485.1 1248010 R 595495 CDS YP_006163486.1 386699649 12761332 complement(1248246..1250567) 1 NC_017660.1 COG0370 Fe2+ transport system protein B; ferrous iron transport protein B 1250567 feoB 12761332 feoB Escherichia coli KO11FL ferrous iron transport protein B YP_006163486.1 1248246 R 595495 CDS YP_006163487.1 386699650 12761333 complement(1250584..1250811) 1 NC_017660.1 COG1918 Fe2+ transport system protein A; ferrous iron transport protein A 1250811 feoA 12761333 feoA Escherichia coli KO11FL ferrous iron transport protein A YP_006163487.1 1250584 R 595495 CDS YP_006163488.1 386699651 12761334 complement(1251249..1253570) 1 NC_017660.1 COG2183 Transcriptional accessory protein; putative transcriptional accessory protein 1253570 yhgF 12761334 yhgF Escherichia coli KO11FL putative transcriptional accessory protein YP_006163488.1 1251249 R 595495 CDS YP_006163489.1 386699652 12761335 complement(1253667..1254143) 1 NC_017660.1 COG0782 Transcription elongation factor; transcription elongation factor GreB 1254143 greB 12761335 greB Escherichia coli KO11FL transcription elongation factor GreB YP_006163489.1 1253667 R 595495 CDS YP_006163490.1 386699653 12761336 1254371..1255090 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; osmolarity response regulator 1255090 ompR 12761336 ompR Escherichia coli KO11FL osmolarity response regulator YP_006163490.1 1254371 D 595495 CDS YP_006163491.1 386699654 12761337 1255096..1256439 1 NC_017660.1 COG0642 Signal transduction histidine kinase; osmolarity sensor protein 1256439 envZ 12761337 envZ Escherichia coli KO11FL osmolarity sensor protein YP_006163491.1 1255096 D 595495 CDS YP_006163492.1 386699655 12761338 complement(1256471..1256767) 1 NC_017660.1 COG2944 Predicted transcriptional regulator; putative HTH-type transcriptional regulator yiaG 1256767 12761338 KO11_05775 Escherichia coli KO11FL putative HTH-type transcriptional regulator yiaG YP_006163492.1 1256471 R 595495 CDS YP_006163493.1 386699656 12761339 complement(1256826..1257143) 1 NC_017660.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; hypothetical protein 1257143 12761339 KO11_05780 Escherichia coli KO11FL hypothetical protein YP_006163493.1 1256826 R 595495 CDS YP_006163494.1 386699657 12761340 complement(1257260..1258882) 1 NC_017660.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase 1258882 pck 12761340 pck Escherichia coli KO11FL phosphoenolpyruvate carboxykinase YP_006163494.1 1257260 R 595495 CDS YP_006163495.1 386699658 12761341 1259261..1260985 1 NC_017660.1 yhgE; hypothetical protein 1260985 12761341 KO11_05790 Escherichia coli KO11FL hypothetical protein YP_006163495.1 1259261 D 595495 CDS YP_006163496.1 386699659 12761342 complement(1261048..1261926) 1 NC_017660.1 COG1281 Disulfide bond chaperones of the HSP33 family; Hsp33-like chaperonin 1261926 hslO 12761342 hslO Escherichia coli KO11FL Hsp33-like chaperonin YP_006163496.1 1261048 R 595495 CDS YP_006163497.1 386699660 12761343 complement(1261951..1262352) 1 NC_017660.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); ribosome-associated heat shock protein Hsp15 1262352 hslR 12761343 hslR Escherichia coli KO11FL ribosome-associated heat shock protein Hsp15 YP_006163497.1 1261951 R 595495 CDS YP_006163498.1 386699661 12761344 complement(1262363..1263031) 1 NC_017660.1 COG1011 Predicted hydrolase (HAD superfamily); GMP/IMP nucleotidase 1263031 yrfG 12761344 yrfG Escherichia coli KO11FL GMP/IMP nucleotidase YP_006163498.1 1262363 R 595495 CDS YP_006163499.1 386699662 12761345 complement(1263096..1265231) 1 NC_017660.1 putative inner membrane protein 1265231 yrfF 12761345 yrfF Escherichia coli KO11FL putative inner membrane protein YP_006163499.1 1263096 R 595495 CDS YP_006163500.1 386699663 12761346 1265551..1266111 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; adenosine nucleotide hydrolase NudE 1266111 nudE 12761346 nudE Escherichia coli KO11FL adenosine nucleotide hydrolase NudE YP_006163500.1 1265551 D 595495 CDS YP_006163501.1 386699664 12761347 complement(1266276..1268828) 1 NC_017660.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein; penicillin-binding protein 1a 1268828 mrcA 12761347 mrcA Escherichia coli KO11FL penicillin-binding protein 1a YP_006163501.1 1266276 R 595495 CDS YP_006163502.1 386699665 12761348 1268948..1269727 1 NC_017660.1 putative pilus assembly protein 1269727 hofM 12761348 hofM Escherichia coli KO11FL putative pilus assembly protein YP_006163502.1 1268948 D 595495 CDS YP_006163503.1 386699666 12761349 1269727..1270266 1 NC_017660.1 putative fimbrial assembly protein 1270266 hofN 12761349 hofN Escherichia coli KO11FL putative fimbrial assembly protein YP_006163503.1 1269727 D 595495 CDS YP_006163504.1 386699667 12761350 1270250..1270690 1 NC_017660.1 hofO; hypothetical protein 1270690 12761350 KO11_05835 Escherichia coli KO11FL hypothetical protein YP_006163504.1 1270250 D 595495 CDS YP_006163505.1 386699668 12761351 1270680..1271084 1 NC_017660.1 hofP; hypothetical protein 1271084 12761351 KO11_05840 Escherichia coli KO11FL hypothetical protein YP_006163505.1 1270680 D 595495 CDS YP_006163506.1 386699669 12761352 1271074..1272234 1 NC_017660.1 COG4796 Type II secretory pathway, component HofQ; outer membrane porin HofQ 1272234 hofQ 12761352 hofQ Escherichia coli KO11FL outer membrane porin HofQ YP_006163506.1 1271074 D 595495 CDS YP_006163507.1 386699670 12761353 1272635..1273156 1 NC_017660.1 COG0703 Shikimate kinase; shikimate kinase I 1273156 aroK 12761353 aroK Escherichia coli KO11FL shikimate kinase I YP_006163507.1 1272635 D 595495 CDS YP_006163508.1 386699671 12761354 1273213..1274301 1 NC_017660.1 COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 1274301 aroB 12761354 aroB Escherichia coli KO11FL 3-dehydroquinate synthase YP_006163508.1 1273213 D 595495 CDS YP_006163509.1 386699672 12761355 1274393..1275679 1 NC_017660.1 COG3266 Uncharacterized protein conserved in bacteria; cell division protein DamX 1275679 damX 12761355 damX Escherichia coli KO11FL cell division protein DamX YP_006163509.1 1274393 D 595495 CDS YP_006163510.1 386699673 12761356 1275786..1276622 1 NC_017660.1 COG0338 Site-specific DNA methylase; DNA adenine methylase 1276622 dam 12761356 dam Escherichia coli KO11FL DNA adenine methylase YP_006163510.1 1275786 D 595495 CDS YP_006163511.1 386699674 12761357 1276640..1277317 1 NC_017660.1 COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 1277317 rpe 12761357 rpe Escherichia coli KO11FL ribulose-phosphate 3-epimerase YP_006163511.1 1276640 D 595495 CDS YP_006163512.1 386699675 12761358 1277310..1278068 1 NC_017660.1 COG0546 Predicted phosphatases; phosphoglycolate phosphatase 1278068 gph 12761358 gph Escherichia coli KO11FL phosphoglycolate phosphatase YP_006163512.1 1277310 D 595495 CDS YP_006163513.1 386699676 12761359 1278061..1279065 1 NC_017660.1 COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 1279065 trpS 12761359 trpS Escherichia coli KO11FL tryptophanyl-tRNA synthetase YP_006163513.1 1278061 D 595495 CDS YP_006163514.1 386699677 12761360 1279225..1280130 1 NC_017660.1 yhfZ; hypothetical protein 1280130 12761360 KO11_05885 Escherichia coli KO11FL hypothetical protein YP_006163514.1 1279225 D 595495 CDS YP_006163515.1 386699678 12761361 1280147..1280509 1 NC_017660.1 yhfY; hypothetical protein 1280509 12761361 KO11_05890 Escherichia coli KO11FL hypothetical protein YP_006163515.1 1280147 D 595495 CDS YP_006163516.1 386699679 12761362 1280593..1281756 1 NC_017660.1 COG3457 Predicted amino acid racemase; putative amino acid racemase 1281756 yhfX 12761362 yhfX Escherichia coli KO11FL putative amino acid racemase YP_006163516.1 1280593 D 595495 CDS YP_006163517.1 386699680 12761363 1281756..1282982 1 NC_017660.1 COG1015 Phosphopentomutase; putative mutase 1282982 yhfW 12761363 yhfW Escherichia coli KO11FL putative mutase YP_006163517.1 1281756 D 595495 CDS YP_006163518.1 386699681 12761364 1282979..1283857 1 NC_017660.1 COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold; putative hydrolase 1283857 php 12761364 php Escherichia coli KO11FL putative hydrolase YP_006163518.1 1282979 D 595495 CDS YP_006163519.1 386699682 12761365 1283868..1284221 1 NC_017660.1 COG0698 Ribose 5-phosphate isomerase RpiB; yhfU; hypothetical protein 1284221 12761365 KO11_05910 Escherichia coli KO11FL hypothetical protein YP_006163519.1 1283868 D 595495 CDS YP_006163520.1 386699683 12761366 1284233..1285537 1 NC_017660.1 yhfT; hypothetical protein 1285537 12761366 KO11_05915 Escherichia coli KO11FL hypothetical protein YP_006163520.1 1284233 D 595495 CDS YP_006163521.1 386699684 12761367 1285549..1286634 1 NC_017660.1 yhfS; hypothetical protein 1286634 12761367 KO11_05920 Escherichia coli KO11FL hypothetical protein YP_006163521.1 1285549 D 595495 CDS YP_006163522.1 386699685 12761368 complement(1286786..1287517) 1 NC_017660.1 COG2188 Transcriptional regulators; DNA-binding transcriptional regulator FrlR 1287517 frlR 12761368 frlR Escherichia coli KO11FL DNA-binding transcriptional regulator FrlR YP_006163522.1 1286786 R 595495 CDS YP_006163523.1 386699686 12761369 complement(1287617..1288402) 1 NC_017660.1 COG0524 Sugar kinases, ribokinase family; fructoselysine 6-kinase 1288402 frlD 12761369 frlD Escherichia coli KO11FL fructoselysine 6-kinase YP_006163523.1 1287617 R 595495 CDS YP_006163524.1 386699687 12761370 complement(1288399..1289229) 1 NC_017660.1 COG1082 Sugar phosphate isomerases/epimerases; fructoselysine 3-epimerase 1289229 frlC 12761370 frlC Escherichia coli KO11FL fructoselysine 3-epimerase YP_006163524.1 1288399 R 595495 CDS YP_006163525.1 386699688 12761371 complement(1289279..1290301) 1 NC_017660.1 COG2222 Predicted phosphosugar isomerases; fructoselysine-6-P-deglycase 1290301 frlB 12761371 frlB Escherichia coli KO11FL fructoselysine-6-P-deglycase YP_006163525.1 1289279 R 595495 CDS YP_006163526.1 386699689 12761372 complement(1290322..1291659) 1 NC_017660.1 COG0531 Amino acid transporters; putative fructoselysine transporter 1291659 frlA 12761372 frlA Escherichia coli KO11FL putative fructoselysine transporter YP_006163526.1 1290322 R 595495 CDS YP_006163527.1 386699690 12761373 complement(1291954..1292121) 1 NC_017660.1 putative lipoprotein 1292121 yhfL 12761373 yhfL Escherichia coli KO11FL putative lipoprotein YP_006163527.1 1291954 R 595495 CDS YP_006163528.1 386699691 12761374 complement(1292368..1293741) 1 NC_017660.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); siroheme synthase 1293741 cysG 12761374 cysG Escherichia coli KO11FL siroheme synthase YP_006163528.1 1292368 R 595495 CDS YP_006163529.1 386699692 12761375 complement(1293760..1294566) 1 NC_017660.1 COG2116 Formate/nitrite family of transporters; nitrite transporter NirC 1294566 nirC 12761375 nirC Escherichia coli KO11FL nitrite transporter NirC YP_006163529.1 1293760 R 595495 CDS YP_006163530.1 386699693 12761376 complement(1294693..1295019) 1 NC_017660.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; nitrite reductase small subunit 1295019 nirD 12761376 nirD Escherichia coli KO11FL nitrite reductase small subunit YP_006163530.1 1294693 R 595495 CDS YP_006163531.1 386699694 12761377 complement(1295016..1297559) 1 NC_017660.1 COG1251 NAD(P)H-nitrite reductase; nitrite reductase subunit NirB 1297559 nirB 12761377 nirB Escherichia coli KO11FL nitrite reductase subunit NirB YP_006163531.1 1295016 R 595495 CDS YP_006163532.1 386699695 12761378 complement(1297821..1299002) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 1299002 tsgA 12761378 tsgA Escherichia coli KO11FL putative transporter YP_006163532.1 1297821 R 595495 CDS YP_006163533.1 386699696 12761379 1299273..1299845 1 NC_017660.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase A 1299845 ppiA 12761379 ppiA Escherichia coli KO11FL peptidyl-prolyl cis-trans isomerase A YP_006163533.1 1299273 D 595495 CDS YP_006163534.1 386699697 12761380 1299950..1300117 1 NC_017660.1 yhfG; hypothetical protein 1300117 12761380 KO11_05985 Escherichia coli KO11FL hypothetical protein YP_006163534.1 1299950 D 595495 CDS YP_006163535.1 386699698 12761381 1300107..1300709 1 NC_017660.1 COG2184 Protein involved in cell division; cell filamentation protein Fic 1300709 fic 12761381 fic Escherichia coli KO11FL cell filamentation protein Fic YP_006163535.1 1300107 D 595495 CDS YP_006163536.1 386699699 12761382 1300741..1301304 1 NC_017660.1 COG0512 Anthranilate/para-aminobenzoate synthases component II; para-aminobenzoate synthase component II 1301304 pabA 12761382 pabA Escherichia coli KO11FL para-aminobenzoate synthase component II YP_006163536.1 1300741 D 595495 CDS YP_006163537.1 386699700 12761383 1301390..1302610 1 NC_017660.1 COG4992 Ornithine/acetylornithine aminotransferase; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 1302610 argD 12761383 argD Escherichia coli KO11FL bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_006163537.1 1301390 D 595495 CDS YP_006163538.1 386699701 12761384 complement(1302677..1304767) 1 NC_017660.1 COG1289 Predicted membrane protein; yhfK; hypothetical protein 1304767 12761384 KO11_06005 Escherichia coli KO11FL hypothetical protein YP_006163538.1 1302677 R 595495 CDS YP_006163539.1 386699702 12761385 complement(1304818..1305450) 1 NC_017660.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; DNA-binding transcriptional dual regulator Crp 1305450 crp 12761385 crp Escherichia coli KO11FL DNA-binding transcriptional dual regulator Crp YP_006163539.1 1304818 R 595495 CDS YP_006163540.1 386699703 12761386 1305752..1306156 1 NC_017660.1 COG1765 Predicted redox protein, regulator of disulfide bond formation; yhfA; hypothetical protein 1306156 12761386 KO11_06015 Escherichia coli KO11FL hypothetical protein YP_006163540.1 1305752 D 595495 CDS YP_006163541.1 386699704 12761387 complement(1306211..1307080) 1 NC_017660.1 COG3954 Phosphoribulokinase; phosphoribulokinase 1307080 prkB 12761387 prkB Escherichia coli KO11FL phosphoribulokinase YP_006163541.1 1306211 R 595495 CDS YP_006163542.1 386699705 12761388 complement(1307134..1307352) 1 NC_017660.1 COG3089 Uncharacterized protein conserved in bacteria; yheU; hypothetical protein 1307352 12761388 KO11_06025 Escherichia coli KO11FL hypothetical protein YP_006163542.1 1307134 R 595495 CDS YP_006163543.1 386699706 12761389 complement(1307346..1308368) 1 NC_017660.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; putative hydrolase 1308368 yheT 12761389 yheT Escherichia coli KO11FL putative hydrolase YP_006163543.1 1307346 R 595495 CDS YP_006163544.1 386699707 12761390 complement(1308368..1310281) 1 NC_017660.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains; putative ABC transporter ATP-binding protein 1310281 yheS 12761390 yheS Escherichia coli KO11FL putative ABC transporter ATP-binding protein YP_006163544.1 1308368 R 595495 CDS YP_006163545.1 386699708 12761391 1310412..1310963 1 NC_017660.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); glutathione-regulated potassium-efflux system ancillary protein KefG 1310963 kefG 12761391 kefG Escherichia coli KO11FL glutathione-regulated potassium-efflux system ancillary protein KefG YP_006163545.1 1310412 D 595495 CDS YP_006163546.1 386699709 12761392 1310963..1312768 1 NC_017660.1 COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein KefB 1312768 kefB 12761392 kefB Escherichia coli KO11FL glutathione-regulated potassium-efflux system protein KefB YP_006163546.1 1310963 D 595495 CDS YP_006163547.1 386699710 12761393 1312778..1312978 1 NC_017660.1 COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain; yheV; hypothetical protein 1312978 12761393 KO11_06050 Escherichia coli KO11FL hypothetical protein YP_006163547.1 1312778 D 595495 CDS YP_006163548.1 386699711 12761394 1313073..1313663 1 NC_017660.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase 1313663 slyD 12761394 slyD Escherichia coli KO11FL FKBP-type peptidyl-prolyl cis-trans isomerase YP_006163548.1 1313073 D 595495 CDS YP_006163549.1 386699712 12761395 complement(1313712..1313930) 1 NC_017660.1 COG2900 Uncharacterized protein conserved in bacteria; phi X174 lysis protein 1313930 slyX 12761395 slyX Escherichia coli KO11FL phi X174 lysis protein YP_006163549.1 1313712 R 595495 CDS YP_006163550.1 386699713 12761396 1314151..1314963 1 NC_017660.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; FKBP-type peptidyl-prolyl cis-trans isomerase 1314963 fkpA 12761396 fkpA Escherichia coli KO11FL FKBP-type peptidyl-prolyl cis-trans isomerase YP_006163550.1 1314151 D 595495 CDS YP_006163551.1 386699714 12761397 1315130..1315852 1 NC_017660.1 COG2964 Uncharacterized protein conserved in bacteria; putative DNA-binding transcriptional regulator 1315852 yheO 12761397 yheO Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163551.1 1315130 D 595495 CDS YP_006163552.1 386699715 12761398 1315852..1316238 1 NC_017660.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction; sulfur transfer complex subunit TusD 1316238 yheN 12761398 yheN Escherichia coli KO11FL sulfur transfer complex subunit TusD YP_006163552.1 1315852 D 595495 CDS YP_006163553.1 386699716 12761399 1316238..1316597 1 NC_017660.1 COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur; sulfur relay protein TusC 1316597 yheM 12761399 yheM Escherichia coli KO11FL sulfur relay protein TusC YP_006163553.1 1316238 D 595495 CDS YP_006163554.1 386699717 12761400 1316605..1316892 1 NC_017660.1 COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur; sulfur transfer complex subunit TusB 1316892 yheL 12761400 yheL Escherichia coli KO11FL sulfur transfer complex subunit TusB YP_006163554.1 1316605 D 595495 CDS YP_006163555.1 386699718 12761401 1317018..1317392 1 NC_017660.1 COG0048 Ribosomal protein S12; 30S ribosomal protein S12 1317392 rpsL 12761401 rpsL Escherichia coli KO11FL 30S ribosomal protein S12 YP_006163555.1 1317018 D 595495 CDS YP_006163556.1 386699719 12761402 1317489..1317959 1 NC_017660.1 COG0049 Ribosomal protein S7; 30S ribosomal protein S7 1317959 rpsG 12761402 rpsG Escherichia coli KO11FL 30S ribosomal protein S7 YP_006163556.1 1317489 D 595495 CDS YP_006163557.1 386699720 12761403 1318056..1320170 1 NC_017660.1 COG0480 Translation elongation factors (GTPases); elongation factor G 1320170 fusA 12761403 fusA Escherichia coli KO11FL elongation factor G YP_006163557.1 1318056 D 595495 CDS YP_006163558.1 386699721 12761404 1320241..1321425 1 NC_017660.1 COG0050 GTPases - translation elongation factors; elongation factor Tu 1321425 tufA 12761404 tufA Escherichia coli KO11FL elongation factor Tu YP_006163558.1 1320241 D 595495 CDS YP_006163559.1 386699722 12761405 1321608..1321802 1 NC_017660.1 COG2906 Bacterioferritin-associated ferredoxin; bacterioferritin-associated ferredoxin 1321802 bfd 12761405 bfd Escherichia coli KO11FL bacterioferritin-associated ferredoxin YP_006163559.1 1321608 D 595495 CDS YP_006163560.1 386699723 12761406 1321875..1322351 1 NC_017660.1 COG2193 Bacterioferritin (cytochrome b1); bacterioferritin 1322351 bfr 12761406 bfr Escherichia coli KO11FL bacterioferritin YP_006163560.1 1321875 D 595495 CDS YP_006163561.1 386699724 12761407 complement(1322348..1322815) 1 NC_017660.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; leader peptidase GspO 1322815 gspO 12761407 gspO Escherichia coli KO11FL leader peptidase GspO YP_006163561.1 1322348 R 595495 CDS YP_006163562.1 386699725 12761408 1323194..1323505 1 NC_017660.1 COG0051 Ribosomal protein S10; 30S ribosomal protein S10 1323505 rpsJ 12761408 rpsJ Escherichia coli KO11FL 30S ribosomal protein S10 YP_006163562.1 1323194 D 595495 CDS YP_006163563.1 386699726 12761409 1323538..1324167 1 NC_017660.1 COG0087 Ribosomal protein L3; 50S ribosomal protein L3 1324167 rplC 12761409 rplC Escherichia coli KO11FL 50S ribosomal protein L3 YP_006163563.1 1323538 D 595495 CDS YP_006163564.1 386699727 12761410 1324178..1324783 1 NC_017660.1 COG0088 Ribosomal protein L4; 50S ribosomal protein L4 1324783 rplD 12761410 rplD Escherichia coli KO11FL 50S ribosomal protein L4 YP_006163564.1 1324178 D 595495 CDS YP_006163565.1 386699728 12761411 1324780..1325082 1 NC_017660.1 COG0089 Ribosomal protein L23; 50S ribosomal protein L23 1325082 rplW 12761411 rplW Escherichia coli KO11FL 50S ribosomal protein L23 YP_006163565.1 1324780 D 595495 CDS YP_006163566.1 386699729 12761412 1325100..1325921 1 NC_017660.1 COG0090 Ribosomal protein L2; 50S ribosomal protein L2 1325921 rplB 12761412 rplB Escherichia coli KO11FL 50S ribosomal protein L2 YP_006163566.1 1325100 D 595495 CDS YP_006163567.1 386699730 12761413 1325938..1326216 1 NC_017660.1 COG0185 Ribosomal protein S19; 30S ribosomal protein S19 1326216 rpsS 12761413 rpsS Escherichia coli KO11FL 30S ribosomal protein S19 YP_006163567.1 1325938 D 595495 CDS YP_006163568.1 386699731 12761414 1326231..1326563 1 NC_017660.1 COG0091 Ribosomal protein L22; 50S ribosomal protein L22 1326563 rplV 12761414 rplV Escherichia coli KO11FL 50S ribosomal protein L22 YP_006163568.1 1326231 D 595495 CDS YP_006163569.1 386699732 12761415 1326581..1327282 1 NC_017660.1 COG0092 Ribosomal protein S3; 30S ribosomal protein S3 1327282 rpsC 12761415 rpsC Escherichia coli KO11FL 30S ribosomal protein S3 YP_006163569.1 1326581 D 595495 CDS YP_006163570.1 386699733 12761416 1327295..1327705 1 NC_017660.1 COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 1327705 rplP 12761416 rplP Escherichia coli KO11FL 50S ribosomal protein L16 YP_006163570.1 1327295 D 595495 CDS YP_006163571.1 386699734 12761417 1327705..1327896 1 NC_017660.1 COG0255 Ribosomal protein L29; 50S ribosomal protein L29 1327896 rpmC 12761417 rpmC Escherichia coli KO11FL 50S ribosomal protein L29 YP_006163571.1 1327705 D 595495 CDS YP_006163572.1 386699735 12761418 1327896..1328150 1 NC_017660.1 COG0186 Ribosomal protein S17; 30S ribosomal protein S17 1328150 rpsQ 12761418 rpsQ Escherichia coli KO11FL 30S ribosomal protein S17 YP_006163572.1 1327896 D 595495 CDS YP_006163573.1 386699736 12761419 1328315..1328686 1 NC_017660.1 COG0093 Ribosomal protein L14; 50S ribosomal protein L14 1328686 rplN 12761419 rplN Escherichia coli KO11FL 50S ribosomal protein L14 YP_006163573.1 1328315 D 595495 CDS YP_006163574.1 386699737 12761420 1328697..1329011 1 NC_017660.1 COG0198 Ribosomal protein L24; 50S ribosomal protein L24 1329011 rplX 12761420 rplX Escherichia coli KO11FL 50S ribosomal protein L24 YP_006163574.1 1328697 D 595495 CDS YP_006163575.1 386699738 12761421 1329026..1329565 1 NC_017660.1 COG0094 Ribosomal protein L5; 50S ribosomal protein L5 1329565 rplE 12761421 rplE Escherichia coli KO11FL 50S ribosomal protein L5 YP_006163575.1 1329026 D 595495 CDS YP_006163576.1 386699739 12761422 1329580..1329885 1 NC_017660.1 COG0199 Ribosomal protein S14; 30S ribosomal protein S14 1329885 rpsN 12761422 rpsN Escherichia coli KO11FL 30S ribosomal protein S14 YP_006163576.1 1329580 D 595495 CDS YP_006163577.1 386699740 12761423 1329919..1330311 1 NC_017660.1 COG0096 Ribosomal protein S8; 30S ribosomal protein S8 1330311 rpsH 12761423 rpsH Escherichia coli KO11FL 30S ribosomal protein S8 YP_006163577.1 1329919 D 595495 CDS YP_006163578.1 386699741 12761424 1330324..1330857 1 NC_017660.1 COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 1330857 rplF 12761424 rplF Escherichia coli KO11FL 50S ribosomal protein L6 YP_006163578.1 1330324 D 595495 CDS YP_006163579.1 386699742 12761425 1330867..1331220 1 NC_017660.1 COG0256 Ribosomal protein L18; 50S ribosomal protein L18 1331220 rplR 12761425 rplR Escherichia coli KO11FL 50S ribosomal protein L18 YP_006163579.1 1330867 D 595495 CDS YP_006163580.1 386699743 12761426 1331235..1331738 1 NC_017660.1 COG0098 Ribosomal protein S5; 30S ribosomal protein S5 1331738 rpsE 12761426 rpsE Escherichia coli KO11FL 30S ribosomal protein S5 YP_006163580.1 1331235 D 595495 CDS YP_006163581.1 386699744 12761427 1331742..1331921 1 NC_017660.1 COG1841 Ribosomal protein L30/L7E; 50S ribosomal protein L30 1331921 rpmD 12761427 rpmD Escherichia coli KO11FL 50S ribosomal protein L30 YP_006163581.1 1331742 D 595495 CDS YP_006163582.1 386699745 12761428 1331925..1332359 1 NC_017660.1 COG0200 Ribosomal protein L15; 50S ribosomal protein L15 1332359 rplO 12761428 rplO Escherichia coli KO11FL 50S ribosomal protein L15 YP_006163582.1 1331925 D 595495 CDS YP_006163583.1 386699746 12761429 1332367..1333698 1 NC_017660.1 COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY 1333698 secY 12761429 secY Escherichia coli KO11FL preprotein translocase subunit SecY YP_006163583.1 1332367 D 595495 CDS YP_006163584.1 386699747 12761430 1333730..1333846 1 NC_017660.1 COG0257 Ribosomal protein L36; 50S ribosomal protein L36 1333846 rpmJ 12761430 rpmJ Escherichia coli KO11FL 50S ribosomal protein L36 YP_006163584.1 1333730 D 595495 CDS YP_006163585.1 386699748 12761431 1333993..1334349 1 NC_017660.1 COG0099 Ribosomal protein S13; 30S ribosomal protein S13 1334349 rpsM 12761431 rpsM Escherichia coli KO11FL 30S ribosomal protein S13 YP_006163585.1 1333993 D 595495 CDS YP_006163586.1 386699749 12761432 1334366..1334755 1 NC_017660.1 COG0100 Ribosomal protein S11; 30S ribosomal protein S11 1334755 rpsK 12761432 rpsK Escherichia coli KO11FL 30S ribosomal protein S11 YP_006163586.1 1334366 D 595495 CDS YP_006163587.1 386699750 12761433 1334789..1335409 1 NC_017660.1 COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 1335409 rpsD 12761433 rpsD Escherichia coli KO11FL 30S ribosomal protein S4 YP_006163587.1 1334789 D 595495 CDS YP_006163588.1 386699751 12761434 1335435..1336424 1 NC_017660.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha 1336424 rpoA 12761434 rpoA Escherichia coli KO11FL DNA-directed RNA polymerase subunit alpha YP_006163588.1 1335435 D 595495 CDS YP_006163589.1 386699752 12761435 1336465..1336848 1 NC_017660.1 COG0203 Ribosomal protein L17; 50S ribosomal protein L17 1336848 rplQ 12761435 rplQ Escherichia coli KO11FL 50S ribosomal protein L17 YP_006163589.1 1336465 D 595495 CDS YP_006163590.1 386699753 12761436 1336955..1337323 1 NC_017660.1 yhdN; hypothetical protein 1337323 12761436 KO11_06265 Escherichia coli KO11FL hypothetical protein YP_006163590.1 1336955 D 595495 CDS YP_006163591.1 386699754 12761437 1337334..1337759 1 NC_017660.1 COG0789 Predicted transcriptional regulators; zinc-responsive transcriptional regulator 1337759 zntR 12761437 zntR Escherichia coli KO11FL zinc-responsive transcriptional regulator YP_006163591.1 1337334 D 595495 CDS YP_006163592.1 386699755 12761438 1337815..1338033 1 NC_017660.1 COG3036 Uncharacterized protein conserved in bacteria; yhdL; hypothetical protein 1338033 12761438 KO11_06275 Escherichia coli KO11FL hypothetical protein YP_006163592.1 1337815 D 595495 CDS YP_006163593.1 386699756 12761439 complement(1338030..1338440) 1 NC_017660.1 COG1970 Large-conductance mechanosensitive channel; large-conductance mechanosensitive channel 1338440 mscL 12761439 mscL Escherichia coli KO11FL large-conductance mechanosensitive channel YP_006163593.1 1338030 R 595495 CDS YP_006163594.1 386699757 12761440 complement(1338570..1339946) 1 NC_017660.1 COG0569 K+ transport systems, NAD-binding component; potassium transporter peripheral membrane protein 1339946 trkA 12761440 trkA Escherichia coli KO11FL potassium transporter peripheral membrane protein YP_006163594.1 1338570 R 595495 CDS YP_006163595.1 386699758 12761441 complement(1339968..1341257) 1 NC_017660.1 COG0144 tRNA and rRNA cytosine-C5-methylases; 16S rRNA methyltransferase B 1341257 rsmB 12761441 rsmB Escherichia coli KO11FL 16S rRNA methyltransferase B YP_006163595.1 1339968 R 595495 CDS YP_006163596.1 386699759 12761442 complement(1341303..1342250) 1 NC_017660.1 COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 1342250 fmt 12761442 fmt Escherichia coli KO11FL methionyl-tRNA formyltransferase YP_006163596.1 1341303 R 595495 CDS YP_006163597.1 386699760 12761443 complement(1342265..1342774) 1 NC_017660.1 COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase 1342774 def 12761443 def Escherichia coli KO11FL peptide deformylase YP_006163597.1 1342265 R 595495 CDS YP_006163598.1 386699761 12761444 1342904..1344028 1 NC_017660.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; smf; hypothetical protein 1344028 12761444 KO11_06305 Escherichia coli KO11FL hypothetical protein YP_006163598.1 1342904 D 595495 CDS YP_006163599.1 386699762 12761445 1344015..1344473 1 NC_017660.1 COG2922 Uncharacterized protein conserved in bacteria; smg; hypothetical protein 1344473 12761445 KO11_06310 Escherichia coli KO11FL hypothetical protein YP_006163599.1 1344015 D 595495 CDS YP_006163600.1 386699763 12761446 1344502..1345044 1 NC_017660.1 COG0551 Zn-finger domain associated with topoisomerase type I; putative DNA topoisomerase 1345044 yrdD 12761446 yrdD Escherichia coli KO11FL putative DNA topoisomerase YP_006163600.1 1344502 D 595495 CDS YP_006163601.1 386699764 12761447 1345049..1345621 1 NC_017660.1 COG0009 Putative translation factor (SUA5); tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein 1345621 rimN 12761447 rimN Escherichia coli KO11FL tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein YP_006163601.1 1345049 D 595495 CDS YP_006163602.1 386699765 12761448 1345626..1346444 1 NC_017660.1 COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 1346444 aroE 12761448 aroE Escherichia coli KO11FL shikimate 5-dehydrogenase YP_006163602.1 1345626 D 595495 CDS YP_006163603.1 386699766 12761449 1346441..1346698 1 NC_017660.1 yrdB; hypothetical protein 1346698 12761449 KO11_06330 Escherichia coli KO11FL hypothetical protein YP_006163603.1 1346441 D 595495 CDS YP_006163604.1 386699767 12761450 complement(1346674..1347228) 1 NC_017660.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; yrdA; hypothetical protein 1347228 12761450 KO11_06335 Escherichia coli KO11FL hypothetical protein YP_006163604.1 1346674 R 595495 CDS YP_006163605.1 386699768 12761451 1347257..1347421 1 NC_017660.1 hypothetical protein 1347421 12761451 KO11_06340 Escherichia coli KO11FL hypothetical protein YP_006163605.1 1347257 D 595495 CDS YP_006163606.1 386699769 12761459 complement(1353278..1354036) 1 NC_017660.1 COG1126 ABC-type polar amino acid transport system, ATPase component; phosphate ABC transporter ATP-binding protein 1354036 yhdZ 12761459 yhdZ Escherichia coli KO11FL phosphate ABC transporter ATP-binding protein YP_006163606.1 1353278 R 595495 CDS YP_006163607.1 386699770 12761460 complement(1354044..1355147) 1 NC_017660.1 COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease component 1355147 yhdY 12761460 yhdY Escherichia coli KO11FL amino acid ABC transporter permease component YP_006163607.1 1354044 R 595495 CDS YP_006163608.1 386699771 12761461 complement(1355157..1356338) 1 NC_017660.1 COG4597 ABC-type amino acid transport system, permease component; putative transport system permease 1356338 yhdX 12761461 yhdX Escherichia coli KO11FL putative transport system permease YP_006163608.1 1355157 R 595495 CDS YP_006163609.1 386699772 12761462 complement(1356406..1357431) 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; putative amino-acid ABC transporter-binding protein yhdW precursor 1357431 yhdW 12761462 yhdW Escherichia coli KO11FL putative amino-acid ABC transporter-binding protein yhdW precursor YP_006163609.1 1356406 R 595495 CDS YP_006163610.1 386699773 12761463 complement(1357862..1358083) 1 NC_017660.1 yhdV; hypothetical protein 1358083 12761463 KO11_06365 Escherichia coli KO11FL hypothetical protein YP_006163610.1 1357862 R 595495 CDS YP_006163611.1 386699774 12761464 complement(1358336..1361440) 1 NC_017660.1 COG0841 Cation/multidrug efflux pump; acriflavine resistance protein 1361440 acrF 12761464 acrF Escherichia coli KO11FL acriflavine resistance protein YP_006163611.1 1358336 R 595495 CDS YP_006163612.1 386699775 12761465 complement(1361452..1362609) 1 NC_017660.1 COG0845 Membrane-fusion protein; hypothetical protein 1362609 acrE 12761465 acrE Escherichia coli KO11FL hypothetical protein YP_006163612.1 1361452 R 595495 CDS YP_006163613.1 386699776 12761466 1363008..1363670 1 NC_017660.1 COG1309 Transcriptional regulator; DNA-binding transcriptional regulator EnvR 1363670 envR 12761466 envR Escherichia coli KO11FL DNA-binding transcriptional regulator EnvR YP_006163613.1 1363008 D 595495 CDS YP_006163614.1 386699777 12761467 complement(1363673..1363852) 1 NC_017660.1 yhdU; hypothetical protein 1363852 12761467 KO11_06385 Escherichia coli KO11FL hypothetical protein YP_006163614.1 1363673 R 595495 CDS YP_006163615.1 386699778 12761468 complement(1363936..1364820) 1 NC_017660.1 COG0863 DNA modification methylase; putative methyltransferase 1364820 yhdJ 12761468 yhdJ Escherichia coli KO11FL putative methyltransferase YP_006163615.1 1363936 R 595495 CDS YP_006163616.1 386699779 12761469 complement(1364906..1365202) 1 NC_017660.1 COG2901 Factor for inversion stimulation Fis, transcriptional activator; global DNA-binding transcriptional dual regulator Fis 1365202 fis 12761469 fis Escherichia coli KO11FL global DNA-binding transcriptional dual regulator Fis YP_006163616.1 1364906 R 595495 CDS YP_006163617.1 386699780 12761470 complement(1365228..1366193) 1 NC_017660.1 COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase B 1366193 dusB 12761470 dusB Escherichia coli KO11FL tRNA-dihydrouridine synthase B YP_006163617.1 1365228 R 595495 CDS YP_006163618.1 386699781 12761471 complement(1366522..1367403) 1 NC_017660.1 COG2264 Ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase 1367403 prmA 12761471 prmA Escherichia coli KO11FL 50S ribosomal protein L11 methyltransferase YP_006163618.1 1366522 R 595495 CDS YP_006163619.1 386699782 12761472 complement(1367415..1368866) 1 NC_017660.1 COG4145 Na+/panthothenate symporter; sodium/panthothenate symporter 1368866 panF 12761472 panF Escherichia coli KO11FL sodium/panthothenate symporter YP_006163619.1 1367415 R 595495 CDS YP_006163620.1 386699783 12761473 complement(1368856..1369098) 1 NC_017660.1 COG3924 Predicted membrane protein; yhdT; hypothetical protein 1369098 12761473 KO11_06415 Escherichia coli KO11FL hypothetical protein YP_006163620.1 1368856 R 595495 CDS YP_006163621.1 386699784 12761474 complement(1369207..1370556) 1 NC_017660.1 COG0439 Biotin carboxylase; acetyl-CoA carboxylase biotin carboxylase subunit 1370556 accC 12761474 accC Escherichia coli KO11FL acetyl-CoA carboxylase biotin carboxylase subunit YP_006163621.1 1369207 R 595495 CDS YP_006163622.1 386699785 12761475 complement(1370567..1371037) 1 NC_017660.1 COG0511 Biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1371037 accB 12761475 accB Escherichia coli KO11FL acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_006163622.1 1370567 R 595495 CDS YP_006163623.1 386699786 12761476 complement(1372015..1372989) 1 NC_017660.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; Quinone oxidoreductase, YhdH family protein 1372989 yhdH 12761476 yhdH Escherichia coli KO11FL Quinone oxidoreductase, YhdH family protein YP_006163623.1 1372015 R 595495 CDS YP_006163624.1 386699787 12761477 1373141..1375081 1 NC_017660.1 COG2199 FOG: GGDEF domain; regulatory protein CsrD 1375081 csrD 12761477 csrD Escherichia coli KO11FL regulatory protein CsrD YP_006163624.1 1373141 D 595495 CDS YP_006163625.1 386699788 12761478 1375386..1376429 1 NC_017660.1 COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB 1376429 mreB 12761478 mreB Escherichia coli KO11FL rod shape-determining protein MreB YP_006163625.1 1375386 D 595495 CDS YP_006163626.1 386699789 12761479 1376495..1377598 1 NC_017660.1 COG1792 Cell shape-determining protein; rod shape-determining protein MreC 1377598 mreC 12761479 mreC Escherichia coli KO11FL rod shape-determining protein MreC YP_006163626.1 1376495 D 595495 CDS YP_006163627.1 386699790 12761480 1377598..1378086 1 NC_017660.1 COG2891 Cell shape-determining protein; rod shape-determining protein MreD 1378086 mreD 12761480 mreD Escherichia coli KO11FL rod shape-determining protein MreD YP_006163627.1 1377598 D 595495 CDS YP_006163628.1 386699791 12761481 1378095..1378688 1 NC_017660.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 1378688 yhdE 12761481 yhdE Escherichia coli KO11FL Maf-like protein YP_006163628.1 1378095 D 595495 CDS YP_006163629.1 386699792 12761482 1378678..1380147 1 NC_017660.1 COG1530 Ribonucleases G and E; ribonuclease G 1380147 rng 12761482 rng Escherichia coli KO11FL ribonuclease G YP_006163629.1 1378678 D 595495 CDS YP_006163630.1 386699793 12761483 1380224..1384015 1 NC_017660.1 COG3164 Predicted membrane protein; yhdP; hypothetical protein 1384015 12761483 KO11_06475 Escherichia coli KO11FL hypothetical protein YP_006163630.1 1380224 D 595495 CDS YP_006163631.1 386699794 12761484 1384354..1385799 1 NC_017660.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs; protease TldD 1385799 tldD 12761484 tldD Escherichia coli KO11FL protease TldD YP_006163631.1 1384354 D 595495 CDS YP_006163632.1 386699795 12761485 complement(1385933..1386844) 1 NC_017660.1 COG0583 Transcriptional regulator; transcriptional regulator 1386844 aaeR 12761485 aaeR Escherichia coli KO11FL transcriptional regulator YP_006163632.1 1385933 R 595495 CDS YP_006163633.1 386699796 12761486 1386976..1387248 1 NC_017660.1 efflux system membrane protein 1387248 aaeX 12761486 aaeX Escherichia coli KO11FL efflux system membrane protein YP_006163633.1 1386976 D 595495 CDS YP_006163634.1 386699797 12761732 1387256..1388188 1 NC_017660.1 COG1566 Multidrug resistance efflux pump; p-hydroxybenzoic acid efflux subunit AaeA 1388188 aaeA 12761732 aaeA Escherichia coli KO11FL p-hydroxybenzoic acid efflux subunit AaeA YP_006163634.1 1387256 D 595495 CDS YP_006163635.1 386699798 12761733 1388194..1390161 1 NC_017660.1 COG1289 Predicted membrane protein; p-hydroxybenzoic acid efflux subunit AaeB 1390161 aaeB 12761733 aaeB Escherichia coli KO11FL p-hydroxybenzoic acid efflux subunit AaeB YP_006163635.1 1388194 D 595495 CDS YP_006163636.1 386699799 12761734 1390253..1390525 1 NC_017660.1 COG2732 Barstar, RNAse (barnase) inhibitor; putative barnase inhibitor 1390525 yhcO 12761734 yhcO Escherichia coli KO11FL putative barnase inhibitor YP_006163636.1 1390253 D 595495 CDS YP_006163637.1 386699800 12761735 complement(1390581..1390895) 1 NC_017660.1 yhcN; hypothetical protein 1390895 12761735 KO11_06510 Escherichia coli KO11FL hypothetical protein YP_006163637.1 1390581 R 595495 CDS YP_006163638.1 386699801 12761736 complement(1391209..1391679) 1 NC_017660.1 COG1438 Arginine repressor; arginine repressor 1391679 argR 12761736 argR Escherichia coli KO11FL arginine repressor YP_006163638.1 1391209 R 595495 CDS YP_006163639.1 386699802 12761737 1392114..1393052 1 NC_017660.1 COG0039 Malate/lactate dehydrogenases; malate dehydrogenase 1393052 mdh 12761737 mdh Escherichia coli KO11FL malate dehydrogenase YP_006163639.1 1392114 D 595495 CDS YP_006163640.1 386699803 12761738 complement(1393115..1394182) 1 NC_017660.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease 1394182 degS 12761738 degS Escherichia coli KO11FL serine endoprotease YP_006163640.1 1393115 R 595495 CDS YP_006163641.1 386699804 12761739 complement(1394272..1395639) 1 NC_017660.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease 1395639 degQ 12761739 degQ Escherichia coli KO11FL serine endoprotease YP_006163641.1 1394272 R 595495 CDS YP_006163642.1 386699805 12761740 complement(1395793..1396191) 1 NC_017660.1 COG3105 Uncharacterized protein conserved in bacteria; yhcB; hypothetical protein 1396191 12761740 KO11_06535 Escherichia coli KO11FL hypothetical protein YP_006163642.1 1395793 R 595495 CDS YP_006163643.1 386699806 12761741 1396385..1397512 1 NC_017660.1 COG1485 Predicted ATPase; yhcM; hypothetical protein 1397512 12761741 KO11_06540 Escherichia coli KO11FL hypothetical protein YP_006163643.1 1396385 D 595495 CDS YP_006163644.1 386699807 12761742 1397731..1398159 1 NC_017660.1 COG0102 Ribosomal protein L13; 50S ribosomal protein L13 1398159 rplM 12761742 rplM Escherichia coli KO11FL 50S ribosomal protein L13 YP_006163644.1 1397731 D 595495 CDS YP_006163645.1 386699808 12761743 1398175..1398567 1 NC_017660.1 COG0103 Ribosomal protein S9; 30S ribosomal protein S9 1398567 rpsI 12761743 rpsI Escherichia coli KO11FL 30S ribosomal protein S9 YP_006163645.1 1398175 D 595495 CDS YP_006163646.1 386699809 12761744 1398962..1399600 1 NC_017660.1 COG0625 Glutathione S-transferase; stringent starvation protein A 1399600 sspA 12761744 sspA Escherichia coli KO11FL stringent starvation protein A YP_006163646.1 1398962 D 595495 CDS YP_006163647.1 386699810 12761745 1399606..1400103 1 NC_017660.1 COG2969 Stringent starvation protein B; ClpXP protease specificity-enhancing factor 1400103 sspB 12761745 sspB Escherichia coli KO11FL ClpXP protease specificity-enhancing factor YP_006163647.1 1399606 D 595495 CDS YP_006163648.1 386699811 12761746 complement(1400146..1401513) 1 NC_017660.1 COG3069 C4-dicarboxylate transporter; putative cryptic C4-dicarboxylate transporter DcuD 1401513 dcuD 12761746 dcuD Escherichia coli KO11FL putative cryptic C4-dicarboxylate transporter DcuD YP_006163648.1 1400146 R 595495 CDS YP_006163649.1 386699812 12761747 1401902..1402684 1 NC_017660.1 COG2186 Transcriptional regulators; transcriptional regulator NanR 1402684 nanR 12761747 nanR Escherichia coli KO11FL transcriptional regulator NanR YP_006163649.1 1401902 D 595495 CDS YP_006163650.1 386699813 12761748 1402806..1403699 1 NC_017660.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; N-acetylneuraminate lyase 1403699 nanA 12761748 nanA Escherichia coli KO11FL N-acetylneuraminate lyase YP_006163650.1 1402806 D 595495 CDS YP_006163651.1 386699814 12761749 1403808..1405298 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative sialic acid transporter 1405298 nanT 12761749 nanT Escherichia coli KO11FL putative sialic acid transporter YP_006163651.1 1403808 D 595495 CDS YP_006163652.1 386699815 12761750 1405346..1406035 1 NC_017660.1 COG3010 Putative N-acetylmannosamine-6-phosphate epimerase; N-acetylmannosamine-6-phosphate 2-epimerase 1406035 nanE 12761750 nanE Escherichia coli KO11FL N-acetylmannosamine-6-phosphate 2-epimerase YP_006163652.1 1405346 D 595495 CDS YP_006163653.1 386699816 12761751 1406032..1406907 1 NC_017660.1 COG1940 Transcriptional regulator/sugar kinase; N-acetylmannosamine kinase 1406907 nanK 12761751 nanK Escherichia coli KO11FL N-acetylmannosamine kinase YP_006163653.1 1406032 D 595495 CDS YP_006163654.1 386699817 12761752 1406904..1407368 1 NC_017660.1 COG2731 Beta-galactosidase, beta subunit; yhcH; hypothetical protein 1407368 12761752 KO11_06595 Escherichia coli KO11FL hypothetical protein YP_006163654.1 1406904 D 595495 CDS YP_006163655.1 386699818 12761753 complement(1407428..1408555) 1 NC_017660.1 COG4804 Uncharacterized conserved protein; yhcG; hypothetical protein 1408555 12761753 KO11_06600 Escherichia coli KO11FL hypothetical protein YP_006163655.1 1407428 R 595495 CDS YP_006163656.1 386699819 12761754 complement(1408739..1410157) 1 NC_017660.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; glutamate synthase subunit beta 1410157 gltD 12761754 gltD Escherichia coli KO11FL glutamate synthase subunit beta YP_006163656.1 1408739 R 595495 CDS YP_006163657.1 386699820 12761755 complement(1410170..1414738) 1 NC_017660.1 COG0067 Glutamate synthase domain 1; glutamate synthase subunit alpha 1414738 gltB 12761755 gltB Escherichia coli KO11FL glutamate synthase subunit alpha YP_006163657.1 1410170 R 595495 CDS YP_006163658.1 386699821 12761756 1415305..1416225 1 NC_017660.1 COG1242 Predicted Fe-S oxidoreductase; putative Fe-S oxidoreductase 1416225 yhcC 12761756 yhcC Escherichia coli KO11FL putative Fe-S oxidoreductase YP_006163658.1 1415305 D 595495 CDS YP_006163659.1 386699822 12761757 1416321..1418657 1 NC_017660.1 COG0642 Signal transduction histidine kinase; aerobic respiration control sensor protein ArcB 1418657 arcB 12761757 arcB Escherichia coli KO11FL aerobic respiration control sensor protein ArcB YP_006163659.1 1416321 D 595495 CDS YP_006163660.1 386699823 12761758 1418887..1419540 1 NC_017660.1 COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; isoprenoid biosynthesis protein 1419540 elbB 12761758 elbB Escherichia coli KO11FL isoprenoid biosynthesis protein YP_006163660.1 1418887 D 595495 CDS YP_006163661.1 386699824 12761759 1419537..1420265 1 NC_017660.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein); monofunctional biosynthetic peptidoglycan transglycosylase 1420265 mtgA 12761759 mtgA Escherichia coli KO11FL monofunctional biosynthetic peptidoglycan transglycosylase YP_006163661.1 1419537 D 595495 CDS YP_006163662.1 386699825 12761760 complement(1420262..1420894) 1 NC_017660.1 yrbL; hypothetical protein 1420894 12761760 KO11_06635 Escherichia coli KO11FL hypothetical protein YP_006163662.1 1420262 R 595495 CDS YP_006163663.1 386699826 12761761 complement(1421108..1421380) 1 NC_017660.1 COG1925 Phosphotransferase system, HPr-related proteins; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 1421380 npr 12761761 npr Escherichia coli KO11FL phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) YP_006163663.1 1421108 R 595495 CDS YP_006163664.1 386699827 12761762 complement(1421377..1422231) 1 NC_017660.1 COG1660 Predicted P-loop-containing kinase; glmZ(sRNA)-inactivating NTPase 1422231 yhbJ 12761762 yhbJ Escherichia coli KO11FL glmZ(sRNA)-inactivating NTPase YP_006163664.1 1421377 R 595495 CDS YP_006163665.1 386699828 12761763 complement(1422277..1422768) 1 NC_017660.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system sugar transporter subunit IIA 1422768 ptsN 12761763 ptsN Escherichia coli KO11FL PTS system sugar transporter subunit IIA YP_006163665.1 1422277 R 595495 CDS YP_006163666.1 386699829 12761764 complement(1422886..1423173) 1 NC_017660.1 COG1544 Ribosome-associated protein Y (PSrp-1); ribosome hibernation promoting factor HPF 1423173 hpf 12761764 hpf Escherichia coli KO11FL ribosome hibernation promoting factor HPF YP_006163666.1 1422886 R 595495 CDS YP_006163667.1 386699830 12761765 complement(1423196..1424629) 1 NC_017660.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 1424629 rpoN 12761765 rpoN Escherichia coli KO11FL RNA polymerase factor sigma-54 YP_006163667.1 1423196 R 595495 CDS YP_006163668.1 386699831 12761766 complement(1424677..1425402) 1 NC_017660.1 COG1137 ABC-type (unclassified) transport system, ATPase component; lipopolysaccharide ABC transporter ATP-binding protein 1425402 lptB 12761766 lptB Escherichia coli KO11FL lipopolysaccharide ABC transporter ATP-binding protein YP_006163668.1 1424677 R 595495 CDS YP_006163669.1 386699832 12761767 complement(1425409..1425966) 1 NC_017660.1 COG1934 Uncharacterized protein conserved in bacteria; lipopolysaccharide transport periplasmic protein LptA 1425966 lptA 12761767 lptA Escherichia coli KO11FL lipopolysaccharide transport periplasmic protein LptA YP_006163669.1 1425409 R 595495 CDS YP_006163670.1 386699833 12761768 complement(1425935..1426510) 1 NC_017660.1 COG3117 Uncharacterized protein conserved in bacteria; lipopolysaccharide exporter periplasmic protein 1426510 lptC 12761768 lptC Escherichia coli KO11FL lipopolysaccharide exporter periplasmic protein YP_006163670.1 1425935 R 595495 CDS YP_006163671.1 386699834 12761769 complement(1426507..1427073) 1 NC_017660.1 COG1778 Low specificity phosphatase (HAD superfamily); 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1427073 kdsC 12761769 kdsC Escherichia coli KO11FL 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_006163671.1 1426507 R 595495 CDS YP_006163672.1 386699835 12761770 complement(1427094..1428080) 1 NC_017660.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation; D-arabinose 5-phosphate isomerase 1428080 kdsD 12761770 kdsD Escherichia coli KO11FL D-arabinose 5-phosphate isomerase YP_006163672.1 1427094 R 595495 CDS YP_006163673.1 386699836 12761771 complement(1428094..1429071) 1 NC_017660.1 COG0530 Ca2+/Na+ antiporter; putative calcium/sodium:proton antiporter 1429071 yrbG 12761771 yrbG Escherichia coli KO11FL putative calcium/sodium:proton antiporter YP_006163673.1 1428094 R 595495 CDS YP_006163674.1 386699837 12761772 1429281..1430090 1 NC_017660.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; putative ABC transporter ATP-binding protein YrbF 1430090 yrbF 12761772 yrbF Escherichia coli KO11FL putative ABC transporter ATP-binding protein YrbF YP_006163674.1 1429281 D 595495 CDS YP_006163675.1 386699838 12761773 1430098..1430880 1 NC_017660.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; toluene transporter subunit: membrane component of ABC superfamily 1430880 yrbE 12761773 yrbE Escherichia coli KO11FL toluene transporter subunit: membrane component of ABC superfamily YP_006163675.1 1430098 D 595495 CDS YP_006163676.1 386699839 12761774 1430885..1431436 1 NC_017660.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; yrbD; hypothetical protein 1431436 12761774 KO11_06705 Escherichia coli KO11FL hypothetical protein YP_006163676.1 1430885 D 595495 CDS YP_006163677.1 386699840 12761775 1431455..1432090 1 NC_017660.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component; ABC transporter substrate-binding protein MlaC 1432090 mlaC 12761775 mlaC Escherichia coli KO11FL ABC transporter substrate-binding protein MlaC YP_006163677.1 1431455 D 595495 CDS YP_006163678.1 386699841 12761776 1432090..1432383 1 NC_017660.1 COG3113 Predicted NTP binding protein (contains STAS domain); yrbB; hypothetical protein 1432383 12761776 KO11_06715 Escherichia coli KO11FL hypothetical protein YP_006163678.1 1432090 D 595495 CDS YP_006163679.1 386699842 12761777 1432528..1432797 1 NC_017660.1 COG5007 Predicted transcriptional regulator, BolA superfamily; putative transcriptional regulator, BolA superfamily protein 1432797 yrbA 12761777 yrbA Escherichia coli KO11FL putative transcriptional regulator, BolA superfamily protein YP_006163679.1 1432528 D 595495 CDS YP_006163680.1 386699843 12761778 1432852..1434111 1 NC_017660.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1434111 murA 12761778 murA Escherichia coli KO11FL UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006163680.1 1432852 D 595495 CDS YP_006163681.1 386699844 12761779 complement(1434159..1434437) 1 NC_017660.1 COG3423 Predicted transcriptional regulator; DNA-binding transcriptional regulator SfsB 1434437 sfsB 12761779 sfsB Escherichia coli KO11FL DNA-binding transcriptional regulator SfsB YP_006163681.1 1434159 R 595495 CDS YP_006163682.1 386699845 12761780 complement(1434665..1435636) 1 NC_017660.1 COG0142 Geranylgeranyl pyrophosphate synthase; octaprenyl diphosphate synthase 1435636 ispB 12761780 ispB Escherichia coli KO11FL octaprenyl diphosphate synthase YP_006163682.1 1434665 R 595495 CDS YP_006163683.1 386699846 12761781 1435895..1436206 1 NC_017660.1 COG0261 Ribosomal protein L21; 50S ribosomal protein L21 1436206 rplU 12761781 rplU Escherichia coli KO11FL 50S ribosomal protein L21 YP_006163683.1 1435895 D 595495 CDS YP_006163684.1 386699847 12761782 1436227..1436484 1 NC_017660.1 COG0211 Ribosomal protein L27; 50S ribosomal protein L27 1436484 rpmA 12761782 rpmA Escherichia coli KO11FL 50S ribosomal protein L27 YP_006163684.1 1436227 D 595495 CDS YP_006163685.1 386699848 12761783 1436611..1437576 1 NC_017660.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; yhbE; hypothetical protein 1437576 12761783 KO11_06750 Escherichia coli KO11FL hypothetical protein YP_006163685.1 1436611 D 595495 CDS YP_006163686.1 386699849 12761784 1437592..1438764 1 NC_017660.1 COG0536 Predicted GTPase; GTPase CgtA 1438764 obgE 12761784 obgE Escherichia coli KO11FL GTPase CgtA YP_006163686.1 1437592 D 595495 CDS YP_006163687.1 386699850 12761785 complement(1438804..1440237) 1 NC_017660.1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); D-alanyl-D-alanine carboxypeptidase 1440237 dacB 12761785 dacB Escherichia coli KO11FL D-alanyl-D-alanine carboxypeptidase YP_006163687.1 1438804 R 595495 CDS YP_006163688.1 386699851 12761786 1440485..1440961 1 NC_017660.1 COG0782 Transcription elongation factor; transcription elongation factor GreA 1440961 greA 12761786 greA Escherichia coli KO11FL transcription elongation factor GreA YP_006163688.1 1440485 D 595495 CDS YP_006163689.1 386699852 12761787 complement(1441117..1441410) 1 NC_017660.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; RNA-binding protein YhbY 1441410 yhbY 12761787 yhbY Escherichia coli KO11FL RNA-binding protein YhbY YP_006163689.1 1441117 R 595495 CDS YP_006163690.1 386699853 12761788 1441536..1442165 1 NC_017660.1 COG0293 23S rRNA methylase; 23S rRNA methyltransferase J 1442165 rlmE 12761788 rlmE Escherichia coli KO11FL 23S rRNA methyltransferase J YP_006163690.1 1441536 D 595495 CDS YP_006163691.1 386699854 12761789 1442265..1444199 1 NC_017660.1 COG0465 ATP-dependent Zn proteases; ATP-dependent metalloprotease 1444199 ftsH 12761789 ftsH Escherichia coli KO11FL ATP-dependent metalloprotease YP_006163691.1 1442265 D 595495 CDS YP_006163692.1 386699855 12761790 1444289..1445137 1 NC_017660.1 COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 1445137 folP 12761790 folP Escherichia coli KO11FL dihydropteroate synthase YP_006163692.1 1444289 D 595495 CDS YP_006163693.1 386699856 12761791 1445130..1446467 1 NC_017660.1 COG1109 Phosphomannomutase; phosphoglucosamine mutase 1446467 glmM 12761791 glmM Escherichia coli KO11FL phosphoglucosamine mutase YP_006163693.1 1445130 D 595495 CDS YP_006163694.1 386699857 12761792 1446695..1447027 1 NC_017660.1 COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 1447027 secG 12761792 secG Escherichia coli KO11FL preprotein translocase subunit SecG YP_006163694.1 1446695 D 595495 CDS YP_006163695.1 386699858 12761794 1447587..1449212 1 NC_017660.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase; putative hydrolase, inner membrane 1449212 yhbX 12761794 yhbX Escherichia coli KO11FL putative hydrolase, inner membrane YP_006163695.1 1447587 D 595495 CDS YP_006163696.1 386699859 12761795 complement(1449220..1450563) 1 NC_017660.1 COG0137 Argininosuccinate synthase; argininosuccinate synthase 1450563 argG 12761795 argG Escherichia coli KO11FL argininosuccinate synthase YP_006163696.1 1449220 R 595495 CDS YP_006163697.1 386699860 12761797 1451224..1451646 1 NC_017660.1 COG0779 Uncharacterized protein conserved in bacteria; ribosome maturation protein RimP 1451646 rimP 12761797 rimP Escherichia coli KO11FL ribosome maturation protein RimP YP_006163697.1 1451224 D 595495 CDS YP_006163698.1 386699861 12761798 1451674..1453161 1 NC_017660.1 COG0195 Transcription elongation factor; transcription elongation factor NusA 1453161 nusA 12761798 nusA Escherichia coli KO11FL transcription elongation factor NusA YP_006163698.1 1451674 D 595495 CDS YP_006163699.1 386699862 12761799 1453186..1455858 1 NC_017660.1 COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 1455858 infB 12761799 infB Escherichia coli KO11FL translation initiation factor IF-2 YP_006163699.1 1453186 D 595495 CDS YP_006163700.1 386699863 12761800 1456022..1456423 1 NC_017660.1 COG0858 Ribosome-binding factor A; ribosome-binding factor A 1456423 rbfA 12761800 rbfA Escherichia coli KO11FL ribosome-binding factor A YP_006163700.1 1456022 D 595495 CDS YP_006163701.1 386699864 12761801 1456423..1457367 1 NC_017660.1 COG0130 Pseudouridine synthase; tRNA pseudouridine synthase B 1457367 truB 12761801 truB Escherichia coli KO11FL tRNA pseudouridine synthase B YP_006163701.1 1456423 D 595495 CDS YP_006163702.1 386699865 12761802 1457516..1457785 1 NC_017660.1 COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 1457785 rpsO 12761802 rpsO Escherichia coli KO11FL 30S ribosomal protein S15 YP_006163702.1 1457516 D 595495 CDS YP_006163703.1 386699866 12761803 1458032..1460167 1 NC_017660.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase 1460167 pnp 12761803 pnp Escherichia coli KO11FL polynucleotide phosphorylase/polyadenylase YP_006163703.1 1458032 D 595495 CDS YP_006163704.1 386699867 12761804 1460276..1461160 1 NC_017660.1 COG4785 Lipoprotein NlpI, contains TPR repeats; lipoprotein NlpI 1461160 nlpI 12761804 nlpI Escherichia coli KO11FL lipoprotein NlpI YP_006163704.1 1460276 D 595495 CDS YP_006163705.1 386699868 12761805 1461340..1463229 1 NC_017660.1 COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DeaD 1463229 deaD 12761805 deaD Escherichia coli KO11FL ATP-dependent RNA helicase DeaD YP_006163705.1 1461340 D 595495 CDS YP_006163706.1 386699869 12761806 1463467..1464627 1 NC_017660.1 COG0814 Amino acid permeases; tryptophan permease 1464627 mtr 12761806 mtr Escherichia coli KO11FL tryptophan permease YP_006163706.1 1463467 D 595495 CDS YP_006163707.1 386699870 12761807 complement(1464745..1465752) 1 NC_017660.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; yhbW; hypothetical protein 1465752 12761807 KO11_06865 Escherichia coli KO11FL hypothetical protein YP_006163707.1 1464745 R 595495 CDS YP_006163708.1 386699871 12761808 complement(1465958..1466836) 1 NC_017660.1 COG0826 Collagenase and related proteases; putative protease 1466836 yhbV 12761808 yhbV Escherichia coli KO11FL putative protease YP_006163708.1 1465958 R 595495 CDS YP_006163709.1 386699872 12761809 complement(1466845..1467840) 1 NC_017660.1 COG0826 Collagenase and related proteases; putative peptidase 1467840 yhbU 12761809 yhbU Escherichia coli KO11FL putative peptidase YP_006163709.1 1466845 R 595495 CDS YP_006163710.1 386699873 12761810 1468049..1468573 1 NC_017660.1 COG3154 Putative lipid carrier protein; yhbT; hypothetical protein 1468573 12761810 KO11_06880 Escherichia coli KO11FL hypothetical protein YP_006163710.1 1468049 D 595495 CDS YP_006163711.1 386699874 12761811 1468567..1469070 1 NC_017660.1 COG3153 Predicted acetyltransferase; yhbS; hypothetical protein 1469070 12761811 KO11_06885 Escherichia coli KO11FL hypothetical protein YP_006163711.1 1468567 D 595495 CDS YP_006163712.1 386699875 12761812 complement(1469057..1469359) 1 NC_017660.1 COG2827 Predicted endonuclease containing a URI domain; GIY-YIG nuclease superfamily protein 1469359 yhbQ 12761812 yhbQ Escherichia coli KO11FL GIY-YIG nuclease superfamily protein YP_006163712.1 1469057 R 595495 CDS YP_006163713.1 386699876 12761813 1469410..1469853 1 NC_017660.1 COG3787 Uncharacterized protein conserved in bacteria; yhbP; hypothetical protein 1469853 12761813 KO11_06895 Escherichia coli KO11FL hypothetical protein YP_006163713.1 1469410 D 595495 CDS YP_006163714.1 386699877 12761814 complement(1469833..1470351) 1 NC_017660.1 COG0693 Putative intracellular protease/amidase; yhbO; hypothetical protein 1470351 12761814 KO11_06900 Escherichia coli KO11FL hypothetical protein YP_006163714.1 1469833 R 595495 CDS YP_006163715.1 386699878 12761815 1470479..1471114 1 NC_017660.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases; putative nucleoside-diphosphate-sugar epimerase 1471114 yraR 12761815 yraR Escherichia coli KO11FL putative nucleoside-diphosphate-sugar epimerase YP_006163715.1 1470479 D 595495 CDS YP_006163716.1 386699879 12761816 1471187..1472227 1 NC_017660.1 COG0701 Predicted permeases; putative permease 1472227 yraQ 12761816 yraQ Escherichia coli KO11FL putative permease YP_006163716.1 1471187 D 595495 CDS YP_006163717.1 386699880 12761817 complement(1472341..1472916) 1 NC_017660.1 COG2823 Predicted periplasmic or secreted lipoprotein; outer membrane lipoprotein 1472916 yraP 12761817 yraP Escherichia coli KO11FL outer membrane lipoprotein YP_006163717.1 1472341 R 595495 CDS YP_006163718.1 386699881 12761818 complement(1472926..1473516) 1 NC_017660.1 COG0279 Phosphoheptose isomerase; DnaA initiator-associating protein DiaA 1473516 diaA 12761818 diaA Escherichia coli KO11FL DnaA initiator-associating protein DiaA YP_006163718.1 1472926 R 595495 CDS YP_006163719.1 386699882 12761819 complement(1473536..1473931) 1 NC_017660.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; yraN; hypothetical protein 1473931 12761819 KO11_06925 Escherichia coli KO11FL hypothetical protein YP_006163719.1 1473536 R 595495 CDS YP_006163720.1 386699883 12761820 complement(1473889..1475925) 1 NC_017660.1 COG3107 Putative lipoprotein; LppC family lipoprotein 1475925 yraM 12761820 yraM Escherichia coli KO11FL LppC family lipoprotein YP_006163720.1 1473889 R 595495 CDS YP_006163721.1 386699884 12761821 1475989..1476849 1 NC_017660.1 COG0313 Predicted methyltransferases; SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase 1476849 yraL 12761821 yraL Escherichia coli KO11FL SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase YP_006163721.1 1475989 D 595495 CDS YP_006163722.1 386699885 12761822 complement(1476892..1477983) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial protein 1477983 yraK 12761822 yraK Escherichia coli KO11FL putative fimbrial protein YP_006163722.1 1476892 R 595495 CDS YP_006163723.1 386699886 12761823 complement(1477994..1480510) 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; putative outer membrane protein 1480510 yraJ 12761823 yraJ Escherichia coli KO11FL putative outer membrane protein YP_006163723.1 1477994 R 595495 CDS YP_006163724.1 386699887 12761824 complement(1480540..1481235) 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; putative periplasmic pilin chaperone 1481235 yraI 12761824 yraI Escherichia coli KO11FL putative periplasmic pilin chaperone YP_006163724.1 1480540 R 595495 CDS YP_006163725.1 386699888 12761825 complement(1481315..1481899) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like adhesin protein 1481899 yraH 12761825 yraH Escherichia coli KO11FL putative fimbrial-like adhesin protein YP_006163725.1 1481315 R 595495 CDS YP_006163726.1 386699889 12761826 complement(1482299..1483054) 1 NC_017660.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; galactosamine-6-phosphate isomerase 1483054 agaI 12761826 agaI Escherichia coli KO11FL galactosamine-6-phosphate isomerase YP_006163726.1 1482299 R 595495 CDS YP_006163727.1 386699890 12761827 complement(1483055..1483846) 1 NC_017660.1 COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; PTS system N-acetylgalactosamine-specific transporter subunit IID 1483846 agaD 12761827 agaD Escherichia coli KO11FL PTS system N-acetylgalactosamine-specific transporter subunit IID YP_006163727.1 1483055 R 595495 CDS YP_006163728.1 386699891 12761828 complement(1483836..1484639) 1 NC_017660.1 COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; PTS system N-acetylgalactosamine-specific transporter subunit IIC 1484639 agaC 12761828 agaC Escherichia coli KO11FL PTS system N-acetylgalactosamine-specific transporter subunit IIC YP_006163728.1 1483836 R 595495 CDS YP_006163729.1 386699892 12761829 complement(1484678..1485154) 1 NC_017660.1 COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; PTS system N-acetylgalactosamine-specific transporter subunit IIB 1485154 agaB 12761829 agaB Escherichia coli KO11FL PTS system N-acetylgalactosamine-specific transporter subunit IIB YP_006163729.1 1484678 R 595495 CDS YP_006163730.1 386699893 12761830 complement(1485321..1486181) 1 NC_017660.1 COG0191 Fructose/tagatose bisphosphate aldolase; tagatose-bisphosphate aldolase 1486181 kbaY 12761830 kbaY Escherichia coli KO11FL tagatose-bisphosphate aldolase YP_006163730.1 1485321 R 595495 CDS YP_006163731.1 386699894 12761831 complement(1486194..1487348) 1 NC_017660.1 COG2222 Predicted phosphosugar isomerases; tagatose-6-phosphate ketose/aldose isomerase 1487348 agaS 12761831 agaS Escherichia coli KO11FL tagatose-6-phosphate ketose/aldose isomerase YP_006163731.1 1486194 R 595495 CDS YP_006163732.1 386699895 12761832 complement(1487698..1488831) 1 NC_017660.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 1488831 12761832 KO11_06990 Escherichia coli KO11FL N-acetylglucosamine-6-phosphate deacetylase YP_006163732.1 1487698 R 595495 CDS YP_006163733.1 386699896 12761833 complement(1488828..1489262) 1 NC_017660.1 COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; PTS system mannose/sorbose-specific transporter subunit IIA 1489262 12761833 KO11_06995 Escherichia coli KO11FL PTS system mannose/sorbose-specific transporter subunit IIA YP_006163733.1 1488828 R 595495 CDS YP_006163734.1 386699897 12761834 complement(1489280..1490158) 1 NC_017660.1 COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; PTS system N-acetylgalactosamine-specific transporter subunit IID 1490158 12761834 KO11_07000 Escherichia coli KO11FL PTS system N-acetylgalactosamine-specific transporter subunit IID YP_006163734.1 1489280 R 595495 CDS YP_006163735.1 386699898 12761835 complement(1490148..1490927) 1 NC_017660.1 COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; N-acetylgalactosamine-specific enzyme IIC component of PTS 1490927 agaW 12761835 agaW Escherichia coli KO11FL N-acetylgalactosamine-specific enzyme IIC component of PTS YP_006163735.1 1490148 R 595495 CDS YP_006163736.1 386699899 12761836 complement(1490938..1491411) 1 NC_017660.1 COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; PTS system N-acetylgalactosamine-specific transporter subunit IIB 1491411 agaV 12761836 agaV Escherichia coli KO11FL PTS system N-acetylgalactosamine-specific transporter subunit IIB YP_006163736.1 1490938 R 595495 CDS YP_006163737.1 386699900 12761837 complement(1491434..1492714) 1 NC_017660.1 COG4573 Predicted tagatose 6-phosphate kinase; tagatose 6-phosphate aldolase subunit KbaZ 1492714 kbaZ 12761837 kbaZ Escherichia coli KO11FL tagatose 6-phosphate aldolase subunit KbaZ YP_006163737.1 1491434 R 595495 CDS YP_006163738.1 386699901 12761838 1492963..1493772 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional regulator AgaR 1493772 agaR 12761838 agaR Escherichia coli KO11FL DNA-binding transcriptional regulator AgaR YP_006163738.1 1492963 D 595495 CDS YP_006163739.1 386699902 12761839 complement(1493827..1494291) 1 NC_017660.1 yhaV; hypothetical protein 1494291 12761839 KO11_07025 Escherichia coli KO11FL hypothetical protein YP_006163739.1 1493827 R 595495 CDS YP_006163740.1 386699903 12761840 complement(1494291..1494626) 1 NC_017660.1 COG2002 Regulators of stationary/sporulation gene expression; antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system 1494626 sohA 12761840 sohA Escherichia coli KO11FL antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system YP_006163740.1 1494291 R 595495 CDS YP_006163741.1 386699904 12761841 complement(1494775..1496346) 1 NC_017660.1 COG2721 Altronate dehydratase; galactarate dehydratase 1496346 garD 12761841 garD Escherichia coli KO11FL galactarate dehydratase YP_006163741.1 1494775 R 595495 CDS YP_006163742.1 386699905 12761842 1496721..1498055 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative galactarate transporter 1498055 garP 12761842 garP Escherichia coli KO11FL putative galactarate transporter YP_006163742.1 1496721 D 595495 CDS YP_006163743.1 386699906 12761843 1498071..1498841 1 NC_017660.1 COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; alpha-dehydro-beta-deoxy-D-glucarate aldolase 1498841 garL 12761843 garL Escherichia coli KO11FL alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_006163743.1 1498071 D 595495 CDS YP_006163744.1 386699907 12761844 1498871..1499761 1 NC_017660.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; tartronate semialdehyde reductase 1499761 garR 12761844 garR Escherichia coli KO11FL tartronate semialdehyde reductase YP_006163744.1 1498871 D 595495 CDS YP_006163745.1 386699908 12761845 1499858..1501003 1 NC_017660.1 COG1929 Glycerate kinase; glycerate kinase 1501003 garK 12761845 garK Escherichia coli KO11FL glycerate kinase YP_006163745.1 1499858 D 595495 CDS YP_006163746.1 386699909 12761846 1501470..1501586 1 NC_017660.1 hypothetical protein 1501586 12761846 KO11_07060 Escherichia coli KO11FL hypothetical protein YP_006163746.1 1501470 D 595495 CDS YP_006163747.1 386699910 12761847 1501583..1501699 1 NC_017660.1 hypothetical protein 1501699 12761847 KO11_07065 Escherichia coli KO11FL hypothetical protein YP_006163747.1 1501583 D 595495 CDS YP_006163748.1 386699911 12761848 1501696..1501824 1 NC_017660.1 hypothetical protein 1501824 12761848 KO11_07070 Escherichia coli KO11FL hypothetical protein YP_006163748.1 1501696 D 595495 CDS YP_006163749.1 386699912 12761849 complement(1501801..1501965) 1 NC_017660.1 hypothetical protein 1501965 12761849 KO11_07075 Escherichia coli KO11FL hypothetical protein YP_006163749.1 1501801 R 595495 CDS YP_006163750.1 386699913 12761850 complement(1502026..1503213) 1 NC_017660.1 yhaC; hypothetical protein 1503213 12761850 KO11_07080 Escherichia coli KO11FL hypothetical protein YP_006163750.1 1502026 R 595495 CDS YP_006163751.1 386699914 12761851 complement(1503235..1503774) 1 NC_017660.1 COG0443 Molecular chaperone; yhaB; hypothetical protein 1503774 12761851 KO11_07085 Escherichia coli KO11FL hypothetical protein YP_006163751.1 1503235 R 595495 CDS YP_006163752.1 386699915 12761852 complement(1504030..1504386) 1 NC_017660.1 DNA-binding transcriptional activator TdcR 1504386 tdcR 12761852 tdcR Escherichia coli KO11FL DNA-binding transcriptional activator TdcR YP_006163752.1 1504030 R 595495 CDS YP_006163753.1 386699916 12761853 1504563..1505501 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional activator TdcA 1505501 tdcA 12761853 tdcA Escherichia coli KO11FL DNA-binding transcriptional activator TdcA YP_006163753.1 1504563 D 595495 CDS YP_006163754.1 386699917 12761854 1505600..1506589 1 NC_017660.1 COG1171 Threonine dehydratase; threonine dehydratase 1506589 tdcB 12761854 tdcB Escherichia coli KO11FL threonine dehydratase YP_006163754.1 1505600 D 595495 CDS YP_006163755.1 386699918 12761855 1506611..1507942 1 NC_017660.1 COG0814 Amino acid permeases; threonine/serine transporter TdcC 1507942 tdcC 12761855 tdcC Escherichia coli KO11FL threonine/serine transporter TdcC YP_006163755.1 1506611 D 595495 CDS YP_006163756.1 386699919 12761856 1507968..1509176 1 NC_017660.1 COG0282 Acetate kinase; propionate/acetate kinase 1509176 tdcD 12761856 tdcD Escherichia coli KO11FL propionate/acetate kinase YP_006163756.1 1507968 D 595495 CDS YP_006163757.1 386699920 12761857 1509210..1511504 1 NC_017660.1 COG1882 Pyruvate-formate lyase; Keto-acid formate acetyltransferase 1511504 tdcE 12761857 tdcE Escherichia coli KO11FL Keto-acid formate acetyltransferase YP_006163757.1 1509210 D 595495 CDS YP_006163758.1 386699921 12761858 1511518..1511907 1 NC_017660.1 COG0251 Putative translation initiation inhibitor, yjgF family; putative endoribonuclease L-PSP 1511907 tdcF 12761858 tdcF Escherichia coli KO11FL putative endoribonuclease L-PSP YP_006163758.1 1511518 D 595495 CDS YP_006163759.1 386699922 12761859 1511979..1513343 1 NC_017660.1 COG1760 L-serine deaminase; L-serine dehydratase TdcG 1513343 tdcG 12761859 tdcG Escherichia coli KO11FL L-serine dehydratase TdcG YP_006163759.1 1511979 D 595495 CDS YP_006163760.1 386699923 12761860 1513618..1514949 1 NC_017660.1 COG0814 Amino acid permeases; putative transporter 1514949 yhaO 12761860 yhaO Escherichia coli KO11FL putative transporter YP_006163760.1 1513618 D 595495 CDS YP_006163761.1 386699924 12761861 1514977..1516287 1 NC_017660.1 COG3681 Uncharacterized conserved protein; yhaM; hypothetical protein 1516287 12761861 KO11_07135 Escherichia coli KO11FL hypothetical protein YP_006163761.1 1514977 D 595495 CDS YP_006163762.1 386699925 12761862 complement(1516499..1516663) 1 NC_017660.1 yhaL; hypothetical protein 1516663 12761862 KO11_07140 Escherichia coli KO11FL hypothetical protein YP_006163762.1 1516499 R 595495 CDS YP_006163763.1 386699926 12761863 complement(1516686..1517387) 1 NC_017660.1 COG1741 Pirin-related protein; putative pirin-related protein 1517387 yhaK 12761863 yhaK Escherichia coli KO11FL putative pirin-related protein YP_006163763.1 1516686 R 595495 CDS YP_006163764.1 386699927 12761864 1517492..1518388 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 1518388 yhaJ 12761864 yhaJ Escherichia coli KO11FL LysR family transcriptional regulator YP_006163764.1 1517492 D 595495 CDS YP_006163765.1 386699928 12761865 complement(1518439..1518795) 1 NC_017660.1 COG3152 Predicted membrane protein; putative inner membrane protein 1518795 yhaI 12761865 yhaI Escherichia coli KO11FL putative inner membrane protein YP_006163765.1 1518439 R 595495 CDS YP_006163766.1 386699929 12761866 complement(1519037..1519402) 1 NC_017660.1 COG3152 Predicted membrane protein; yhaH; hypothetical protein 1519402 12761866 KO11_07160 Escherichia coli KO11FL hypothetical protein YP_006163766.1 1519037 R 595495 CDS YP_006163767.1 386699930 12761867 complement(1519695..1520468) 1 NC_017660.1 COG0435 Predicted glutathione S-transferase; fragmented by IS10 insertion; putative transferase 1520468 yqjG_2 12761867 yqjG_2 Escherichia coli KO11FL putative transferase YP_006163767.1 1519695 R 595495 CDS YP_006163768.1 386699931 12761868 1520717..1521952 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 1521952 12761868 KO11_07170 Escherichia coli KO11FL IS10 transposase YP_006163768.1 1520717 D 595495 CDS YP_006163769.1 386699932 12761869 complement(1521895..1522020) 1 NC_017660.1 putative transferase 1522020 yqjG_1 12761869 yqjG_1 Escherichia coli KO11FL putative transferase YP_006163769.1 1521895 R 595495 CDS YP_006163770.1 386699933 12761870 complement(1522090..1522482) 1 NC_017660.1 COG2259 Predicted membrane protein; yqjF; hypothetical protein 1522482 12761870 KO11_07180 Escherichia coli KO11FL hypothetical protein YP_006163770.1 1522090 R 595495 CDS YP_006163771.1 386699934 12761871 complement(1522668..1522967) 1 NC_017660.1 yqjK; hypothetical protein 1522967 12761871 KO11_07185 Escherichia coli KO11FL hypothetical protein YP_006163771.1 1522668 R 595495 CDS YP_006163772.1 386699935 12761872 complement(1522957..1523361) 1 NC_017660.1 yqjE; hypothetical protein 1523361 12761872 KO11_07190 Escherichia coli KO11FL hypothetical protein YP_006163772.1 1522957 R 595495 CDS YP_006163773.1 386699936 12761873 complement(1523364..1523669) 1 NC_017660.1 COG4575 Uncharacterized conserved protein; yqjD; hypothetical protein 1523669 12761873 KO11_07195 Escherichia coli KO11FL hypothetical protein YP_006163773.1 1523364 R 595495 CDS YP_006163774.1 386699937 12761874 complement(1523707..1524075) 1 NC_017660.1 yqjC; hypothetical protein 1524075 12761874 KO11_07200 Escherichia coli KO11FL hypothetical protein YP_006163774.1 1523707 R 595495 CDS YP_006163775.1 386699938 12761875 complement(1524222..1524590) 1 NC_017660.1 EnvZ/OmpR regulon moderator 1524590 yqjB 12761875 yqjB Escherichia coli KO11FL EnvZ/OmpR regulon moderator YP_006163775.1 1524222 R 595495 CDS YP_006163776.1 386699939 12761876 complement(1524609..1525271) 1 NC_017660.1 COG0586 Uncharacterized membrane-associated protein; yqjA; hypothetical protein 1525271 12761876 KO11_07210 Escherichia coli KO11FL hypothetical protein YP_006163776.1 1524609 R 595495 CDS YP_006163777.1 386699940 12761877 complement(1525616..1526392) 1 NC_017660.1 COG2186 Transcriptional regulators; DNA-binding transcriptional repressor ExuR 1526392 exuR 12761877 exuR Escherichia coli KO11FL DNA-binding transcriptional repressor ExuR YP_006163777.1 1525616 R 595495 CDS YP_006163778.1 386699941 12761878 1526688..1527404 1 NC_017660.1 putative fimbrial protein 1527404 eafA 12761878 eafA Escherichia coli KO11FL putative fimbrial protein YP_006163778.1 1526688 D 595495 CDS YP_006163779.1 386699942 12761879 1527434..1527934 1 NC_017660.1 putative fimbrial subunit 1527934 eafB 12761879 eafB Escherichia coli KO11FL putative fimbrial subunit YP_006163779.1 1527434 D 595495 CDS YP_006163780.1 386699943 12761880 1528008..1530710 1 NC_017660.1 putative outer membrane usher protein 1530710 eafC 12761880 eafC Escherichia coli KO11FL putative outer membrane usher protein YP_006163780.1 1528008 D 595495 CDS YP_006163781.1 386699944 12761881 1530707..1531795 1 NC_017660.1 eafD; hypothetical protein 1531795 12761881 KO11_07235 Escherichia coli KO11FL hypothetical protein YP_006163781.1 1530707 D 595495 CDS YP_006163782.1 386699945 12761882 complement(1531883..1533301) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; hexuronate transporter ExuT 1533301 exuT 12761882 exuT Escherichia coli KO11FL hexuronate transporter ExuT YP_006163782.1 1531883 R 595495 CDS YP_006163783.1 386699946 12761883 1533664..1535076 1 NC_017660.1 COG1904 Glucuronate isomerase; glucuronate isomerase 1535076 uxaC 12761883 uxaC Escherichia coli KO11FL glucuronate isomerase YP_006163783.1 1533664 D 595495 CDS YP_006163784.1 386699947 12761884 1535091..1536578 1 NC_017660.1 COG2721 Altronate dehydratase; altronate hydrolase 1536578 uxaA 12761884 uxaA Escherichia coli KO11FL altronate hydrolase YP_006163784.1 1535091 D 595495 CDS YP_006163785.1 386699948 12761885 1536661..1537212 1 NC_017660.1 ygjV; hypothetical protein 1537212 12761885 KO11_07255 Escherichia coli KO11FL hypothetical protein YP_006163785.1 1536661 D 595495 CDS YP_006163786.1 386699949 12761886 complement(1537217..1538461) 1 NC_017660.1 COG3633 Na+/serine symporter; serine/threonine transporter SstT 1538461 sstT 12761886 sstT Escherichia coli KO11FL serine/threonine transporter SstT YP_006163786.1 1537217 R 595495 CDS YP_006163787.1 386699950 12761887 complement(1538860..1539825) 1 NC_017660.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance; putative inner membrane protein 1539825 alx 12761887 alx Escherichia coli KO11FL putative inner membrane protein YP_006163787.1 1538860 R 595495 CDS YP_006163788.1 386699951 12761888 complement(1540108..1541112) 1 NC_017660.1 COG0673 Predicted dehydrogenases and related proteins; putative NAD(P)-binding dehydrogenase 1541112 ygjR 12761888 ygjR Escherichia coli KO11FL putative NAD(P)-binding dehydrogenase YP_006163788.1 1540108 R 595495 CDS YP_006163789.1 386699952 12761889 complement(1541173..1541856) 1 NC_017660.1 COG2949 Uncharacterized membrane protein; putative thioredoxin-like protein 1541856 ygjQ 12761889 ygjQ Escherichia coli KO11FL putative thioredoxin-like protein YP_006163789.1 1541173 R 595495 CDS YP_006163790.1 386699953 12761890 complement(1541933..1542436) 1 NC_017660.1 COG1451 Predicted metal-dependent hydrolase; ygjP; hypothetical protein 1542436 12761890 KO11_07280 Escherichia coli KO11FL hypothetical protein YP_006163790.1 1541933 R 595495 CDS YP_006163791.1 386699954 12761891 1542521..1543657 1 NC_017660.1 COG2813 16S RNA G1207 methylase RsmC; SAM-dependent 23S ribosomal RNA mG1835 methyltransferase 1543657 rlmG 12761891 rlmG Escherichia coli KO11FL SAM-dependent 23S ribosomal RNA mG1835 methyltransferase YP_006163791.1 1542521 D 595495 CDS YP_006163792.1 386699955 12761892 1543761..1543931 1 NC_017660.1 hypothetical protein 1543931 12761892 KO11_07290 Escherichia coli KO11FL hypothetical protein YP_006163792.1 1543761 D 595495 CDS YP_006163793.1 386699956 12761893 1543928..1544344 1 NC_017660.1 COG5499 Predicted transcription regulator containing HTH domain; putative DNA-binding transcriptional regulator 1544344 ygjM 12761893 ygjM Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163793.1 1543928 D 595495 CDS YP_006163794.1 386699957 12761894 complement(1544389..1546407) 1 NC_017660.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; 2,4-dienoyl-CoA reductase 1546407 fadH 12761894 fadH Escherichia coli KO11FL 2,4-dienoyl-CoA reductase YP_006163794.1 1544389 R 595495 CDS YP_006163795.1 386699958 12761895 complement(1546733..1549084) 1 NC_017660.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; alpha-glucosidase 1549084 ygjK 12761895 ygjK Escherichia coli KO11FL alpha-glucosidase YP_006163795.1 1546733 R 595495 CDS YP_006163796.1 386699959 12761896 complement(1549101..1550171) 1 NC_017660.1 ygjJ; hypothetical protein 1550171 12761896 KO11_07310 Escherichia coli KO11FL hypothetical protein YP_006163796.1 1549101 R 595495 CDS YP_006163797.1 386699960 12761897 complement(1550305..1551738) 1 NC_017660.1 COG0531 Amino acid transporters; amino acid permease 1551738 ygjI 12761897 ygjI Escherichia coli KO11FL amino acid permease YP_006163797.1 1550305 R 595495 CDS YP_006163798.1 386699961 12761898 complement(1551801..1552136) 1 NC_017660.1 COG2731 Beta-galactosidase, beta subunit; fragmented by IS10 insertion; cryptic beta-D-galactosidase subunit beta 1552136 ebgC_2 12761898 ebgC_2 Escherichia coli KO11FL cryptic beta-D-galactosidase subunit beta YP_006163798.1 1551801 R 595495 CDS YP_006163799.1 386699962 12761899 complement(1552425..1553318) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; pseudo; IS10 transposase 1553318 12761899 KO11_07325 Escherichia coli KO11FL IS10 transposase YP_006163799.1 1552425 R 595495 CDS YP_006163800.1 386699963 12761900 complement(1553258..1553587) 1 NC_017660.1 cryptic beta-D-galactosidase subunit beta 1553587 ebgC_1 12761900 ebgC_1 Escherichia coli KO11FL cryptic beta-D-galactosidase subunit beta YP_006163800.1 1553258 R 595495 CDS YP_006163801.1 386699964 12761901 complement(1553584..1556676) 1 NC_017660.1 COG3250 Beta-galactosidase/beta-glucuronidase; cryptic beta-D-galactosidase subunit alpha 1556676 ebgA 12761901 ebgA Escherichia coli KO11FL cryptic beta-D-galactosidase subunit alpha YP_006163801.1 1553584 R 595495 CDS YP_006163802.1 386699965 12761902 complement(1556860..1557843) 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional repressor EbgR 1557843 ebgR 12761902 ebgR Escherichia coli KO11FL DNA-binding transcriptional repressor EbgR YP_006163802.1 1556860 R 595495 CDS YP_006163803.1 386699966 12761903 1558062..1558394 1 NC_017660.1 COG0073 EMAP domain; tRNA-binding protein 1558394 ygjH 12761903 ygjH Escherichia coli KO11FL tRNA-binding protein YP_006163803.1 1558062 D 595495 CDS YP_006163804.1 386699967 12761904 complement(1558436..1559725) 1 NC_017660.1 COG4992 Ornithine/acetylornithine aminotransferase; putrescine--2-oxoglutarate aminotransferase 1559725 ygjG 12761904 ygjG Escherichia coli KO11FL putrescine--2-oxoglutarate aminotransferase YP_006163804.1 1558436 R 595495 CDS YP_006163805.1 386699968 12761905 1560233..1561753 1 NC_017660.1 COG2202 FOG: PAS/PAC domain; fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component 1561753 aer 12761905 aer Escherichia coli KO11FL fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component YP_006163805.1 1560233 D 595495 CDS YP_006163806.1 386699969 12761906 complement(1561907..1562530) 1 NC_017660.1 COG1695 Predicted transcriptional regulators; putative transcriptional regulator 1562530 yqjI 12761906 yqjI Escherichia coli KO11FL putative transcriptional regulator YP_006163806.1 1561907 R 595495 CDS YP_006163807.1 386699970 12761907 1562807..1563571 1 NC_017660.1 COG2375 Siderophore-interacting protein; siderophore-interacting protein 1563571 yqjH 12761907 yqjH Escherichia coli KO11FL siderophore-interacting protein YP_006163807.1 1562807 D 595495 CDS YP_006163808.1 386699971 12761909 1563825..1564331 1 NC_017660.1 COG3663 G:T/U mismatch-specific DNA glycosylase; G/U mismatch-specific DNA glycosylase 1564331 mug 12761909 mug Escherichia coli KO11FL G/U mismatch-specific DNA glycosylase YP_006163808.1 1563825 D 595495 CDS YP_006163809.1 386699972 12761910 complement(1564409..1566250) 1 NC_017660.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD 1566250 rpoD 12761910 rpoD Escherichia coli KO11FL RNA polymerase sigma factor RpoD YP_006163809.1 1564409 R 595495 CDS YP_006163810.1 386699973 12761911 complement(1566445..1568190) 1 NC_017660.1 COG0358 DNA primase (bacterial type); DNA primase 1568190 dnaG 12761911 dnaG Escherichia coli KO11FL DNA primase YP_006163810.1 1566445 R 595495 CDS YP_006163811.1 386699974 12761912 complement(1568301..1568516) 1 NC_017660.1 COG0828 Ribosomal protein S21; 30S ribosomal protein S21 1568516 rpsU 12761912 rpsU Escherichia coli KO11FL 30S ribosomal protein S21 YP_006163811.1 1568301 R 595495 CDS YP_006163812.1 386699975 12761913 1568753..1569766 1 NC_017660.1 COG0533 Metal-dependent proteases with possible chaperone activity; glycation-binding protein 1569766 gcp 12761913 gcp Escherichia coli KO11FL glycation-binding protein YP_006163812.1 1568753 D 595495 CDS YP_006163813.1 386699976 12761914 complement(1569809..1571272) 1 NC_017660.1 COG0471 Di- and tricarboxylate transporters; putative tartrate:succinate antiporter 1571272 ttdT 12761914 ttdT Escherichia coli KO11FL putative tartrate:succinate antiporter YP_006163813.1 1569809 R 595495 CDS YP_006163814.1 386699977 12761915 complement(1571321..1571926) 1 NC_017660.1 COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain; L(+)-tartrate dehydratase subunit beta 1571926 ttdB 12761915 ttdB Escherichia coli KO11FL L(+)-tartrate dehydratase subunit beta YP_006163814.1 1571321 R 595495 CDS YP_006163815.1 386699978 12761916 complement(1571923..1572834) 1 NC_017660.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; tartrate dehydratase subunit alpha 1572834 ttdA 12761916 ttdA Escherichia coli KO11FL tartrate dehydratase subunit alpha YP_006163815.1 1571923 R 595495 CDS YP_006163816.1 386699979 12761917 1573041..1573973 1 NC_017660.1 COG0583 Transcriptional regulator; transcriptional activator TtdR 1573973 ttdR 12761917 ttdR Escherichia coli KO11FL transcriptional activator TtdR YP_006163816.1 1573041 D 595495 CDS YP_006163817.1 386699980 12761918 complement(1573986..1574603) 1 NC_017660.1 COG0344 Predicted membrane protein; putative glycerol-3-phosphate acyltransferase PlsY 1574603 ygiH 12761918 ygiH Escherichia coli KO11FL putative glycerol-3-phosphate acyltransferase PlsY YP_006163817.1 1573986 R 595495 CDS YP_006163818.1 386699981 12761919 1574708..1575076 1 NC_017660.1 COG1539 Dihydroneopterin aldolase; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 1575076 folB 12761919 folB Escherichia coli KO11FL bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase YP_006163818.1 1574708 D 595495 CDS YP_006163819.1 386699982 12761920 1575166..1575987 1 NC_017660.1 COG1968 Uncharacterized bacitracin resistance protein; undecaprenyl pyrophosphate phosphatase 1575987 bacA 12761920 bacA Escherichia coli KO11FL undecaprenyl pyrophosphate phosphatase YP_006163819.1 1575166 D 595495 CDS YP_006163820.1 386699983 12761921 complement(1576150..1577388) 1 NC_017660.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 1577388 cca 12761921 cca Escherichia coli KO11FL multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_006163820.1 1576150 R 595495 CDS YP_006163821.1 386699984 12761922 complement(1577452..1578072) 1 NC_017660.1 COG3103 SH3 domain protein; SH3 domain-containing protein 1578072 ygiM 12761922 ygiM Escherichia coli KO11FL SH3 domain-containing protein YP_006163821.1 1577452 R 595495 CDS YP_006163822.1 386699985 12761923 1578314..1579615 1 NC_017660.1 COG3025 Uncharacterized conserved protein; adenylate cyclase 1579615 ygiF 12761923 ygiF Escherichia coli KO11FL adenylate cyclase YP_006163822.1 1578314 D 595495 CDS YP_006163823.1 386699986 12761924 1579638..1582478 1 NC_017660.1 COG1391 Glutamine synthetase adenylyltransferase; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1582478 glnE 12761924 glnE Escherichia coli KO11FL bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_006163823.1 1579638 D 595495 CDS YP_006163824.1 386699987 12761925 1582526..1583959 1 NC_017660.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 1583959 rfaE 12761925 rfaE Escherichia coli KO11FL bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_006163824.1 1582526 D 595495 CDS YP_006163825.1 386699988 12761926 complement(1584753..1586414) 1 NC_017660.1 COG2268 Uncharacterized protein conserved in bacteria; yqiK; hypothetical protein 1586414 12761926 KO11_07460 Escherichia coli KO11FL hypothetical protein YP_006163825.1 1584753 R 595495 CDS YP_006163826.1 386699989 12761927 complement(1586441..1587070) 1 NC_017660.1 putative inner membrane protein 1587070 yqiJ 12761927 yqiJ Escherichia coli KO11FL putative inner membrane protein YP_006163826.1 1586441 R 595495 CDS YP_006163827.1 386699990 12761928 1587339..1587539 1 NC_017660.1 glycogen synthesis protein GlgS 1587539 glgS 12761928 glgS Escherichia coli KO11FL glycogen synthesis protein GlgS YP_006163827.1 1587339 D 595495 CDS YP_006163828.1 386699991 12761929 complement(1587582..1588646) 1 NC_017660.1 yqiI; hypothetical protein 1588646 12761929 KO11_07475 Escherichia coli KO11FL hypothetical protein YP_006163828.1 1587582 R 595495 CDS YP_006163829.1 386699992 12761930 complement(1588648..1589397) 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; putative fimbrial chaperone 1589397 yqiH 12761930 yqiH Escherichia coli KO11FL putative fimbrial chaperone YP_006163829.1 1588648 R 595495 CDS YP_006163830.1 386699993 12761931 complement(1589413..1591917) 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; putative outer membrane usher protein 1591917 yqiG 12761931 yqiG Escherichia coli KO11FL putative outer membrane usher protein YP_006163830.1 1589413 R 595495 CDS YP_006163831.1 386699994 12761932 complement(1591977..1592528) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial protein 1592528 ygiL 12761932 ygiL Escherichia coli KO11FL putative fimbrial protein YP_006163831.1 1591977 R 595495 CDS YP_006163832.1 386699995 12761933 complement(1592811..1593101) 1 NC_017660.1 COG2960 Uncharacterized protein conserved in bacteria; yqiC; hypothetical protein 1593101 12761933 KO11_07495 Escherichia coli KO11FL hypothetical protein YP_006163832.1 1592811 R 595495 CDS YP_006163833.1 386699996 12761934 1593475..1594128 1 NC_017660.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1594128 ribB 12761934 ribB Escherichia coli KO11FL 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006163833.1 1593475 D 595495 CDS YP_006163834.1 386699997 12761935 1594390..1594560 1 NC_017660.1 hypothetical protein 1594560 12761935 KO11_07505 Escherichia coli KO11FL hypothetical protein YP_006163834.1 1594390 D 595495 CDS YP_006163835.1 386699998 12761936 complement(1594618..1595391) 1 NC_017660.1 COG0428 Predicted divalent heavy-metal cations transporter; zinc transporter ZupT 1595391 zupT 12761936 zupT Escherichia coli KO11FL zinc transporter ZupT YP_006163835.1 1594618 R 595495 CDS YP_006163836.1 386699999 12761937 1595534..1596322 1 NC_017660.1 COG3384 Uncharacterized conserved protein; LigB family dioxygenase 1596322 ygiD 12761937 ygiD Escherichia coli KO11FL LigB family dioxygenase YP_006163836.1 1595534 D 595495 CDS YP_006163837.1 386700000 12761938 complement(1596360..1597520) 1 NC_017660.1 COG0754 Glutathionylspermidine synthase; putative synthetase/amidase 1597520 ygiC 12761938 ygiC Escherichia coli KO11FL putative synthetase/amidase YP_006163837.1 1596360 R 595495 CDS YP_006163838.1 386700001 12761939 complement(1597526..1598197) 1 NC_017660.1 COG5463 Predicted integral membrane protein; ygiB; hypothetical protein 1598197 12761939 KO11_07525 Escherichia coli KO11FL hypothetical protein YP_006163838.1 1597526 R 595495 CDS YP_006163839.1 386700002 12761940 complement(1598345..1599826) 1 NC_017660.1 COG1538 Outer membrane protein; outer membrane channel protein 1599826 tolC 12761940 tolC Escherichia coli KO11FL outer membrane channel protein YP_006163839.1 1598345 R 595495 CDS YP_006163840.1 386700003 12761941 1600031..1600660 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; ADP-ribose pyrophosphatase NudF 1600660 nudF 12761941 nudF Escherichia coli KO11FL ADP-ribose pyrophosphatase NudF YP_006163840.1 1600031 D 595495 CDS YP_006163841.1 386700004 12761942 1600661..1601083 1 NC_017660.1 COG3151 Uncharacterized protein conserved in bacteria; putative dehydrogenase 1601083 yqiB 12761942 yqiB Escherichia coli KO11FL putative dehydrogenase YP_006163841.1 1600661 D 595495 CDS YP_006163842.1 386700005 12761943 1601108..1601935 1 NC_017660.1 COG1409 Predicted phosphohydrolases; cyclic 3',5'-adenosine monophosphate phosphodiesterase 1601935 cpdA 12761943 cpdA Escherichia coli KO11FL cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_006163842.1 1601108 D 595495 CDS YP_006163843.1 386700006 12761944 1601935..1602516 1 NC_017660.1 COG3150 Predicted esterase; esterase YqiA 1602516 yqiA 12761944 yqiA Escherichia coli KO11FL esterase YqiA YP_006163843.1 1601935 D 595495 CDS YP_006163844.1 386700007 12761945 1602545..1604437 1 NC_017660.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA topoisomerase IV subunit B 1604437 parE 12761945 parE Escherichia coli KO11FL DNA topoisomerase IV subunit B YP_006163844.1 1602545 D 595495 CDS YP_006163845.1 386700008 12761946 complement(1604485..1604799) 1 NC_017660.1 COG1359 Uncharacterized conserved protein; Protein ygiN 1604799 ygiN 12761946 ygiN Escherichia coli KO11FL Protein ygiN YP_006163845.1 1604485 R 595495 CDS YP_006163846.1 386700009 12761947 complement(1604830..1605411) 1 NC_017660.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); Modulator of drug activity B 1605411 mdaB 12761947 mdaB Escherichia coli KO11FL Modulator of drug activity B YP_006163846.1 1604830 R 595495 CDS YP_006163847.1 386700010 12761948 1605730..1606062 1 NC_017660.1 ygiZ; hypothetical protein 1606062 12761948 KO11_07570 Escherichia coli KO11FL hypothetical protein YP_006163847.1 1605730 D 595495 CDS YP_006163848.1 386700011 12761949 complement(1606108..1607457) 1 NC_017660.1 COG0642 Signal transduction histidine kinase; sensor protein QseC 1607457 qseC 12761949 qseC Escherichia coli KO11FL sensor protein QseC YP_006163848.1 1606108 R 595495 CDS YP_006163849.1 386700012 12761950 complement(1607454..1608113) 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator QseB 1608113 qseB 12761950 qseB Escherichia coli KO11FL DNA-binding transcriptional regulator QseB YP_006163849.1 1607454 R 595495 CDS YP_006163850.1 386700013 12761951 1608265..1608657 1 NC_017660.1 COG3111 Uncharacterized conserved protein; Protein ygiW 1608657 ygiW 12761951 ygiW Escherichia coli KO11FL Protein ygiW YP_006163850.1 1608265 D 595495 CDS YP_006163851.1 386700014 12761952 1608710..1609192 1 NC_017660.1 COG3449 DNA gyrase inhibitor; putative transcriptional regulator 1609192 ygiV 12761952 ygiV Escherichia coli KO11FL putative transcriptional regulator YP_006163851.1 1608710 D 595495 CDS YP_006163852.1 386700015 12761953 1609738..1611996 1 NC_017660.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA topoisomerase IV subunit A 1611996 parC 12761953 parC Escherichia coli KO11FL DNA topoisomerase IV subunit A YP_006163852.1 1609738 D 595495 CDS YP_006163853.1 386700016 12761954 1612229..1612966 1 NC_017660.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1612966 plsC 12761954 plsC Escherichia coli KO11FL 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_006163853.1 1612229 D 595495 CDS YP_006163854.1 386700017 12761955 1613041..1614453 1 NC_017660.1 COG2132 Putative multicopper oxidases; FtsI repressor 1614453 ftsP 12761955 ftsP Escherichia coli KO11FL FtsI repressor YP_006163854.1 1613041 D 595495 CDS YP_006163855.1 386700018 12761956 1614564..1616783 1 NC_017660.1 COG1032 Fe-S oxidoreductase; ygiQ; hypothetical protein 1616783 12761956 KO11_07610 Escherichia coli KO11FL hypothetical protein YP_006163855.1 1614564 D 595495 CDS YP_006163856.1 386700019 12761957 complement(1616826..1617083) 1 NC_017660.1 COG0144 tRNA and rRNA cytosine-C5-methylases; putative outer membrane lipoprotein 1617083 yqhH 12761957 yqhH Escherichia coli KO11FL putative outer membrane lipoprotein YP_006163856.1 1616826 R 595495 CDS YP_006163857.1 386700020 12761958 complement(1617134..1618060) 1 NC_017660.1 yqhG; hypothetical protein 1618060 12761958 KO11_07620 Escherichia coli KO11FL hypothetical protein YP_006163857.1 1617134 R 595495 CDS YP_006163858.1 386700021 12761959 complement(1618260..1619087) 1 NC_017660.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase; 2,5-diketo-D-gluconate reductase A 1619087 dkgA 12761959 dkgA Escherichia coli KO11FL 2,5-diketo-D-gluconate reductase A YP_006163858.1 1618260 R 595495 CDS YP_006163859.1 386700022 12761960 complement(1619192..1620355) 1 NC_017660.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; aldehyde reductase 1620355 yqhD 12761960 yqhD Escherichia coli KO11FL aldehyde reductase YP_006163859.1 1619192 R 595495 CDS YP_006163860.1 386700023 12761961 1620492..1621448 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator, ARAC-type 1621448 yqhC 12761961 yqhC Escherichia coli KO11FL DNA-binding transcriptional regulator, ARAC-type YP_006163860.1 1620492 D 595495 CDS YP_006163861.1 386700024 12761962 complement(1621488..1622147) 1 NC_017660.1 COG0586 Uncharacterized membrane-associated protein; yghB; hypothetical protein 1622147 12761962 KO11_07640 Escherichia coli KO11FL hypothetical protein YP_006163861.1 1621488 R 595495 CDS YP_006163862.1 386700025 12761963 complement(1622287..1623474) 1 NC_017660.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine beta-lyase 1623474 metC 12761963 metC Escherichia coli KO11FL cystathionine beta-lyase YP_006163862.1 1622287 R 595495 CDS YP_006163863.1 386700026 12761964 1623517..1623732 1 NC_017660.1 hypothetical protein 1623732 12761964 KO11_07650 Escherichia coli KO11FL hypothetical protein YP_006163863.1 1623517 D 595495 CDS YP_006163864.1 386700027 12761965 1623725..1624459 1 NC_017660.1 COG0811 Biopolymer transport proteins; biopolymer transport protein ExbB 1624459 exbB 12761965 exbB Escherichia coli KO11FL biopolymer transport protein ExbB YP_006163864.1 1623725 D 595495 CDS YP_006163865.1 386700028 12761966 1624466..1624891 1 NC_017660.1 COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 1624891 exbD 12761966 exbD Escherichia coli KO11FL biopolymer transport protein ExbD YP_006163865.1 1624466 D 595495 CDS YP_006163866.1 386700029 12761967 complement(1625163..1626047) 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 1626047 yghA 12761967 yghA Escherichia coli KO11FL oxidoreductase YP_006163866.1 1625163 R 595495 CDS YP_006163867.1 386700030 12761968 1626238..1626732 1 NC_017660.1 COG2862 Predicted membrane protein; yqhA; hypothetical protein 1626732 12761968 KO11_07670 Escherichia coli KO11FL hypothetical protein YP_006163867.1 1626238 D 595495 CDS YP_006163868.1 386700031 12761969 complement(1626772..1627812) 1 NC_017660.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); L-glyceraldehyde 3-phosphate reductase 1627812 yghZ 12761969 yghZ Escherichia coli KO11FL L-glyceraldehyde 3-phosphate reductase YP_006163868.1 1626772 R 595495 CDS YP_006163869.1 386700032 12761970 1627969..1628856 1 NC_017660.1 COG0412 Dienelactone hydrolase and related enzymes; hypothetical protein 1628856 yghX 12761970 yghX Escherichia coli KO11FL hypothetical protein YP_006163869.1 1627969 D 595495 CDS YP_006163870.1 386700033 12761971 1628975..1629262 1 NC_017660.1 yghW; hypothetical protein 1629262 12761971 KO11_07685 Escherichia coli KO11FL hypothetical protein YP_006163870.1 1628975 D 595495 CDS YP_006163871.1 386700034 12761972 1629451..1630569 1 NC_017660.1 COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase 2 small subunit 1630569 hybO 12761972 hybO Escherichia coli KO11FL hydrogenase 2 small subunit YP_006163871.1 1629451 D 595495 CDS YP_006163872.1 386700035 12761973 1630572..1631558 1 NC_017660.1 COG0437 Fe-S-cluster-containing hydrogenase components 1; hydrogenase 2 protein HybA 1631558 hybA 12761973 hybA Escherichia coli KO11FL hydrogenase 2 protein HybA YP_006163872.1 1630572 D 595495 CDS YP_006163873.1 386700036 12761974 1631548..1632726 1 NC_017660.1 COG5557 Polysulphide reductase; putative hydrogenase 2 b cytochrome subunit 1632726 hybB 12761974 hybB Escherichia coli KO11FL putative hydrogenase 2 b cytochrome subunit YP_006163873.1 1631548 D 595495 CDS YP_006163874.1 386700037 12761975 1632723..1634426 1 NC_017660.1 COG0374 Ni,Fe-hydrogenase I large subunit; hydrogenase 2 large subunit 1634426 hybC 12761975 hybC Escherichia coli KO11FL hydrogenase 2 large subunit YP_006163874.1 1632723 D 595495 CDS YP_006163875.1 386700038 12761976 1634426..1634920 1 NC_017660.1 COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 2 maturation endopeptidase 1634920 hybD 12761976 hybD Escherichia coli KO11FL hydrogenase 2 maturation endopeptidase YP_006163875.1 1634426 D 595495 CDS YP_006163876.1 386700039 12761977 1634913..1635401 1 NC_017660.1 hydrogenase 2-specific chaperone 1635401 hybE 12761977 hybE Escherichia coli KO11FL hydrogenase 2-specific chaperone YP_006163876.1 1634913 D 595495 CDS YP_006163877.1 386700040 12761978 1635394..1635735 1 NC_017660.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein HybF 1635735 hybF 12761978 hybF Escherichia coli KO11FL hydrogenase nickel incorporation protein HybF YP_006163877.1 1635394 D 595495 CDS YP_006163878.1 386700041 12761979 1635748..1635996 1 NC_017660.1 COG0298 Hydrogenase maturation factor; hydrogenase 2 accessory protein HybG 1635996 hybG 12761979 hybG Escherichia coli KO11FL hydrogenase 2 accessory protein HybG YP_006163878.1 1635748 D 595495 CDS YP_006163879.1 386700042 12761980 complement(1636119..1636985) 1 NC_017660.1 COG0625 Glutathione S-transferase; putative S-transferase 1636985 yghU 12761980 yghU Escherichia coli KO11FL putative S-transferase YP_006163879.1 1636119 R 595495 CDS YP_006163880.1 386700043 12761981 1637190..1639049 1 NC_017660.1 COG0754 Glutathionylspermidine synthase; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 1639049 gsp 12761981 gsp Escherichia coli KO11FL bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase YP_006163880.1 1637190 D 595495 CDS YP_006163881.1 386700044 12761982 1639341..1640840 1 NC_017660.1 COG0306 Phosphate/sulphate permeases; phosphate transporter 1640840 pitB 12761982 pitB Escherichia coli KO11FL phosphate transporter YP_006163881.1 1639341 D 595495 CDS YP_006163882.1 386700045 12761983 complement(1640894..1641586) 1 NC_017660.1 COG0125 Thymidylate kinase; hypothetical protein 1641586 yghT 12761983 yghT Escherichia coli KO11FL hypothetical protein YP_006163882.1 1640894 R 595495 CDS YP_006163883.1 386700046 12761984 1641775..1642473 1 NC_017660.1 COG0125 Thymidylate kinase; yghS; hypothetical protein 1642473 12761984 KO11_07750 Escherichia coli KO11FL hypothetical protein YP_006163883.1 1641775 D 595495 CDS YP_006163884.1 386700047 12761985 1642505..1643263 1 NC_017660.1 COG0178 Excinuclease ATPase subunit; hypothetical protein 1643263 yghR 12761985 yghR Escherichia coli KO11FL hypothetical protein YP_006163884.1 1642505 D 595495 CDS YP_006163885.1 386700048 12761986 1643309..1644658 1 NC_017660.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; putative inner membrane protein 1644658 yghQ 12761986 yghQ Escherichia coli KO11FL putative inner membrane protein YP_006163885.1 1643309 D 595495 CDS YP_006163886.1 386700049 12761987 1644658..1645482 1 NC_017660.1 COG0372 Citrate synthase; hypothetical protein 1645482 12761987 KO11_07765 Escherichia coli KO11FL hypothetical protein YP_006163886.1 1644658 D 595495 CDS YP_006163887.1 386700050 12761988 1645494..1646054 1 NC_017660.1 COG3054 Predicted transcriptional regulator; Protein ytfJ-like protein 1646054 12761988 KO11_07770 Escherichia coli KO11FL Protein ytfJ-like protein YP_006163887.1 1645494 D 595495 CDS YP_006163888.1 386700051 12761989 1646085..1647155 1 NC_017660.1 COG0795 Predicted permeases; Permease YjgP/YjgQ family protein precursor 1647155 12761989 KO11_07775 Escherichia coli KO11FL Permease YjgP/YjgQ family protein precursor YP_006163888.1 1646085 D 595495 CDS YP_006163889.1 386700052 12761990 1647152..1648231 1 NC_017660.1 COG0795 Predicted permeases; hypothetical protein 1648231 12761990 KO11_07780 Escherichia coli KO11FL hypothetical protein YP_006163889.1 1647152 D 595495 CDS YP_006163890.1 386700053 12761991 complement(1648266..1649438) 1 NC_017660.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; hypothetical protein 1649438 12761991 KO11_07785 Escherichia coli KO11FL hypothetical protein YP_006163890.1 1648266 R 595495 CDS YP_006163891.1 386700054 12761992 complement(1649438..1649686) 1 NC_017660.1 COG0236 Acyl carrier protein; hypothetical protein 1649686 12761992 KO11_07790 Escherichia coli KO11FL hypothetical protein YP_006163891.1 1649438 R 595495 CDS YP_006163892.1 386700055 12761993 complement(1649718..1650632) 1 NC_017660.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases; putative epimerase 1650632 12761993 KO11_07795 Escherichia coli KO11FL putative epimerase YP_006163892.1 1649718 R 595495 CDS YP_006163893.1 386700056 12761994 complement(1650629..1652350) 1 NC_017660.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; acyl-CoA synthetase 1652350 12761994 KO11_07800 Escherichia coli KO11FL acyl-CoA synthetase YP_006163893.1 1650629 R 595495 CDS YP_006163894.1 386700057 12761995 1652721..1653863 1 NC_017660.1 putative DNA-binding transcriptional regulator 1653863 yghO 12761995 yghO Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163894.1 1652721 D 595495 CDS YP_006163895.1 386700058 12761996 complement(1653870..1654634) 1 NC_017660.1 COG2186 Transcriptional regulators; DNA-binding transcriptional regulator GlcC 1654634 glcC 12761996 glcC Escherichia coli KO11FL DNA-binding transcriptional regulator GlcC YP_006163895.1 1653870 R 595495 CDS YP_006163896.1 386700059 12761997 1654885..1656384 1 NC_017660.1 COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase subunit GlcD 1656384 glcD 12761997 glcD Escherichia coli KO11FL glycolate oxidase subunit GlcD YP_006163896.1 1654885 D 595495 CDS YP_006163897.1 386700060 12761998 1656384..1657436 1 NC_017660.1 COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase FAD binding subunit 1657436 glcE 12761998 glcE Escherichia coli KO11FL glycolate oxidase FAD binding subunit YP_006163897.1 1656384 D 595495 CDS YP_006163898.1 386700061 12761999 1657447..1658670 1 NC_017660.1 COG0247 Fe-S oxidoreductase; glycolate oxidase iron-sulfur subunit 1658670 glcF 12761999 glcF Escherichia coli KO11FL glycolate oxidase iron-sulfur subunit YP_006163898.1 1657447 D 595495 CDS YP_006163899.1 386700062 12762000 1658675..1659079 1 NC_017660.1 COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol; glcG; hypothetical protein 1659079 12762000 KO11_07830 Escherichia coli KO11FL hypothetical protein YP_006163899.1 1658675 D 595495 CDS YP_006163900.1 386700063 12762001 1659101..1661272 1 NC_017660.1 COG2225 Malate synthase; malate synthase G 1661272 glcB 12762001 glcB Escherichia coli KO11FL malate synthase G YP_006163900.1 1659101 D 595495 CDS YP_006163901.1 386700064 12762002 1661628..1663310 1 NC_017660.1 COG1620 L-lactate permease; glycolate transporter 1663310 glcA 12762002 glcA Escherichia coli KO11FL glycolate transporter YP_006163901.1 1661628 D 595495 CDS YP_006163902.1 386700065 12762003 1663796..1668358 1 NC_017660.1 inner membrane lipoprotein 1668358 yghJ 12762003 yghJ Escherichia coli KO11FL inner membrane lipoprotein YP_006163902.1 1663796 D 595495 CDS YP_006163903.1 386700066 12762004 1668506..1669315 1 NC_017660.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; bifunctional prepilin leader peptidase/methylase 1669315 pppA 12762004 pppA Escherichia coli KO11FL bifunctional prepilin leader peptidase/methylase YP_006163903.1 1668506 D 595495 CDS YP_006163904.1 386700067 12762005 1669381..1669791 1 NC_017660.1 yghG; hypothetical protein 1669791 12762005 KO11_07855 Escherichia coli KO11FL hypothetical protein YP_006163904.1 1669381 D 595495 CDS YP_006163905.1 386700068 12762006 1669809..1670768 1 NC_017660.1 COG3031 Type II secretory pathway, component PulC; putative type II secretion protein GspC 1670768 gspC 12762006 gspC Escherichia coli KO11FL putative type II secretion protein GspC YP_006163905.1 1669809 D 595495 CDS YP_006163906.1 386700069 12762007 1670798..1672858 1 NC_017660.1 COG1450 Type II secretory pathway, component PulD; General secretion pathway protein D 1672858 gspD 12762007 gspD Escherichia coli KO11FL General secretion pathway protein D YP_006163906.1 1670798 D 595495 CDS YP_006163907.1 386700070 12762008 1672858..1674351 1 NC_017660.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; general secretion pathway protein E 1674351 gspE 12762008 gspE Escherichia coli KO11FL general secretion pathway protein E YP_006163907.1 1672858 D 595495 CDS YP_006163908.1 386700071 12762009 1674351..1675574 1 NC_017660.1 COG1459 Type II secretory pathway, component PulF; General secretion pathway protein F 1675574 gspF 12762009 gspF Escherichia coli KO11FL General secretion pathway protein F YP_006163908.1 1674351 D 595495 CDS YP_006163909.1 386700072 12762010 1675591..1676046 1 NC_017660.1 COG2165 Type II secretory pathway, pseudopilin PulG; putative general secretion pathway protein G precursor 1676046 gspG 12762010 gspG Escherichia coli KO11FL putative general secretion pathway protein G precursor YP_006163909.1 1675591 D 595495 CDS YP_006163910.1 386700073 12762011 1676050..1676613 1 NC_017660.1 COG2165 Type II secretory pathway, pseudopilin PulG; general secretion pathway protein H 1676613 gspH 12762011 gspH Escherichia coli KO11FL general secretion pathway protein H YP_006163910.1 1676050 D 595495 CDS YP_006163911.1 386700074 12762012 1676610..1676981 1 NC_017660.1 COG2165 Type II secretory pathway, pseudopilin PulG; putative type II secretion protein 1676981 gspI 12762012 gspI Escherichia coli KO11FL putative type II secretion protein YP_006163911.1 1676610 D 595495 CDS YP_006163912.1 386700075 12762013 1676978..1677583 1 NC_017660.1 COG4795 Type II secretory pathway, component PulJ; general secretion pathway protein J 1677583 gspJ 12762013 gspJ Escherichia coli KO11FL general secretion pathway protein J YP_006163912.1 1676978 D 595495 CDS YP_006163913.1 386700076 12762014 1677580..1678557 1 NC_017660.1 COG3156 Type II secretory pathway, component PulK; putative type II secretion protein (GspK-like) 1678557 gspK 12762014 gspK Escherichia coli KO11FL putative type II secretion protein (GspK-like) YP_006163913.1 1677580 D 595495 CDS YP_006163914.1 386700077 12762015 1678554..1679732 1 NC_017660.1 COG3297 Type II secretory pathway, component PulL; GspL-like protein 1679732 gspL 12762015 gspL Escherichia coli KO11FL GspL-like protein YP_006163914.1 1678554 D 595495 CDS YP_006163915.1 386700078 12762016 1679734..1680270 1 NC_017660.1 COG3149 Type II secretory pathway, component PulM; putative general secretion pathway protein YghD 1680270 gspM 12762016 gspM Escherichia coli KO11FL putative general secretion pathway protein YghD YP_006163915.1 1679734 D 595495 CDS YP_006163916.1 386700079 12762018 complement(1680600..1681307) 1 NC_017660.1 COG1811 Uncharacterized membrane protein, possible Na+ channel or pump; yqgA; hypothetical protein 1681307 12762018 KO11_07915 Escherichia coli KO11FL hypothetical protein YP_006163916.1 1680600 R 595495 CDS YP_006163917.1 386700080 12762019 1681705..1683840 1 NC_017660.1 COG1982 Arginine/lysine/ornithine decarboxylases; ornithine decarboxylase 1683840 speC 12762019 speC Escherichia coli KO11FL ornithine decarboxylase YP_006163917.1 1681705 D 595495 CDS YP_006163918.1 386700081 12762020 complement(1683890..1685146) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; Transport of nucleosides, permease protein 1685146 nupG 12762020 nupG Escherichia coli KO11FL Transport of nucleosides, permease protein YP_006163918.1 1683890 R 595495 CDS YP_006163919.1 386700082 12762021 complement(1685348..1686427) 1 NC_017660.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); murein transglycosylase C 1686427 mltC 12762021 mltC Escherichia coli KO11FL murein transglycosylase C YP_006163919.1 1685348 R 595495 CDS YP_006163920.1 386700083 12762022 complement(1686492..1686767) 1 NC_017660.1 COG2924 Fe-S cluster protector protein; oxidative damage protection protein 1686767 yggX 12762022 yggX Escherichia coli KO11FL oxidative damage protection protein YP_006163920.1 1686492 R 595495 CDS YP_006163921.1 386700084 12762023 complement(1686795..1687847) 1 NC_017660.1 COG1194 A/G-specific DNA glycosylase; adenine DNA glycosylase 1687847 mutY 12762023 mutY Escherichia coli KO11FL adenine DNA glycosylase YP_006163921.1 1686795 R 595495 CDS YP_006163922.1 386700085 12762024 1688008..1688727 1 NC_017660.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1688727 trmI 12762024 trmI Escherichia coli KO11FL tRNA (guanine-N(7)-)-methyltransferase YP_006163922.1 1688008 D 595495 CDS YP_006163923.1 386700086 12762025 1688727..1689053 1 NC_017660.1 COG3171 Uncharacterized protein conserved in bacteria; yggL; hypothetical protein 1689053 12762025 KO11_07950 Escherichia coli KO11FL hypothetical protein YP_006163923.1 1688727 D 595495 CDS YP_006163924.1 386700087 12762026 1689076..1689216 1 NC_017660.1 hypothetical protein 1689216 12762026 KO11_07955 Escherichia coli KO11FL hypothetical protein YP_006163924.1 1689076 D 595495 CDS YP_006163925.1 386700088 12762027 1689240..1689956 1 NC_017660.1 yggN; hypothetical protein 1689956 12762027 KO11_07960 Escherichia coli KO11FL hypothetical protein YP_006163925.1 1689240 D 595495 CDS YP_006163926.1 386700089 12762028 1690132..1691178 1 NC_017660.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II 1691178 ansB 12762028 ansB Escherichia coli KO11FL L-asparaginase II YP_006163926.1 1690132 D 595495 CDS YP_006163927.1 386700090 12762029 1691295..1692302 1 NC_017660.1 yggM; hypothetical protein 1692302 12762029 KO11_07970 Escherichia coli KO11FL hypothetical protein YP_006163927.1 1691295 D 595495 CDS YP_006163928.1 386700091 12762030 complement(1692457..1693593) 1 NC_017660.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; HemN family oxidoreductase 1693593 yggW 12762030 yggW Escherichia coli KO11FL HemN family oxidoreductase YP_006163928.1 1692457 R 595495 CDS YP_006163929.1 386700092 12762031 complement(1693586..1694179) 1 NC_017660.1 COG0127 Xanthosine triphosphate pyrophosphatase; dITP/XTP pyrophosphatase 1694179 rdgB 12762031 rdgB Escherichia coli KO11FL dITP/XTP pyrophosphatase YP_006163929.1 1693586 R 595495 CDS YP_006163930.1 386700093 12762032 complement(1694187..1694477) 1 NC_017660.1 COG1872 Uncharacterized conserved protein; yggU; hypothetical protein 1694477 12762032 KO11_07985 Escherichia coli KO11FL hypothetical protein YP_006163930.1 1694187 R 595495 CDS YP_006163931.1 386700094 12762033 complement(1694474..1695040) 1 NC_017660.1 COG0762 Predicted integral membrane protein; hypothetical protein 1695040 yggT 12762033 yggT Escherichia coli KO11FL hypothetical protein YP_006163931.1 1694474 R 595495 CDS YP_006163932.1 386700095 12762034 complement(1695058..1695762) 1 NC_017660.1 COG0325 Predicted enzyme with a TIM-barrel fold; yggS; hypothetical protein 1695762 12762034 KO11_07995 Escherichia coli KO11FL hypothetical protein YP_006163932.1 1695058 R 595495 CDS YP_006163933.1 386700096 12762035 1695780..1696760 1 NC_017660.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; transporter 1696760 yggR 12762035 yggR Escherichia coli KO11FL transporter YP_006163933.1 1695780 D 595495 CDS YP_006163934.1 386700097 12762036 complement(1696936..1697352) 1 NC_017660.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 1697352 yqgF 12762036 yqgF Escherichia coli KO11FL Holliday junction resolvase-like protein YP_006163934.1 1696936 R 595495 CDS YP_006163935.1 386700098 12762037 complement(1697352..1697915) 1 NC_017660.1 COG1678 Putative transcriptional regulator; yqgE; hypothetical protein 1697915 12762037 KO11_08010 Escherichia coli KO11FL hypothetical protein YP_006163935.1 1697352 R 595495 CDS YP_006163936.1 386700099 12762038 complement(1698024..1698974) 1 NC_017660.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); glutathione synthetase 1698974 gshB 12762038 gshB Escherichia coli KO11FL glutathione synthetase YP_006163936.1 1698024 R 595495 CDS YP_006163937.1 386700100 12762039 complement(1698987..1699718) 1 NC_017660.1 COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 1699718 rsmE 12762039 rsmE Escherichia coli KO11FL 16S ribosomal RNA methyltransferase RsmE YP_006163937.1 1698987 R 595495 CDS YP_006163938.1 386700101 12762040 complement(1699798..1700505) 1 NC_017660.1 COG2356 Endonuclease I; DNA-specific endonuclease I 1700505 endA 12762040 endA Escherichia coli KO11FL DNA-specific endonuclease I YP_006163938.1 1699798 R 595495 CDS YP_006163939.1 386700102 12762041 complement(1700600..1701097) 1 NC_017660.1 COG3091 Uncharacterized protein conserved in bacteria; yggI; hypothetical protein 1701097 12762041 KO11_08030 Escherichia coli KO11FL hypothetical protein YP_006163939.1 1700600 R 595495 CDS YP_006163940.1 386700103 12762042 complement(1701174..1702568) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; D-galactose transporter GalP 1702568 galP 12762042 galP Escherichia coli KO11FL D-galactose transporter GalP YP_006163940.1 1701174 R 595495 CDS YP_006163941.1 386700104 12762043 complement(1703004..1704158) 1 NC_017660.1 COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 1704158 metK 12762043 metK Escherichia coli KO11FL S-adenosylmethionine synthetase YP_006163941.1 1703004 R 595495 CDS YP_006163942.1 386700105 12762044 1704214..1704465 1 NC_017660.1 yqgD; hypothetical protein 1704465 12762044 KO11_08045 Escherichia coli KO11FL hypothetical protein YP_006163942.1 1704214 D 595495 CDS YP_006163943.1 386700106 12762045 1704798..1704944 1 NC_017660.1 yqgB; hypothetical protein 1704944 12762045 KO11_08050 Escherichia coli KO11FL hypothetical protein YP_006163943.1 1704798 D 595495 CDS YP_006163944.1 386700107 12762046 1705031..1706929 1 NC_017660.1 COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase 1706929 speA 12762046 speA Escherichia coli KO11FL arginine decarboxylase YP_006163944.1 1705031 D 595495 CDS YP_006163945.1 386700108 12762047 1707075..1707806 1 NC_017660.1 hypothetical protein 1707806 12762047 KO11_08060 Escherichia coli KO11FL hypothetical protein YP_006163945.1 1707075 D 595495 CDS YP_006163946.1 386700109 12762048 1707942..1708862 1 NC_017660.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; agmatinase 1708862 speB 12762048 speB Escherichia coli KO11FL agmatinase YP_006163946.1 1707942 D 595495 CDS YP_006163947.1 386700110 12762049 complement(1709068..1709826) 1 NC_017660.1 COG0501 Zn-dependent protease with chaperone function; putative peptidase 1709826 yggG 12762049 yggG Escherichia coli KO11FL putative peptidase YP_006163947.1 1709068 R 595495 CDS YP_006163948.1 386700111 12762050 1710104..1712095 1 NC_017660.1 COG0021 Transketolase; transketolase 1712095 tktA 12762050 tktA Escherichia coli KO11FL transketolase YP_006163948.1 1710104 D 595495 CDS YP_006163949.1 386700112 12762051 1712409..1712852 1 NC_017660.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); putative PTS system mannitol-specific transporter subunit IIA 1712852 cmtB 12762051 cmtB Escherichia coli KO11FL putative PTS system mannitol-specific transporter subunit IIA YP_006163949.1 1712409 D 595495 CDS YP_006163950.1 386700113 12762052 1712880..1714268 1 NC_017660.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component; putative fused mannitol-specific PTS enzymes: IIB component/IIC component 1714268 cmtA 12762052 cmtA Escherichia coli KO11FL putative fused mannitol-specific PTS enzymes: IIB component/IIC component YP_006163950.1 1712880 D 595495 CDS YP_006163951.1 386700114 12762053 1714283..1715560 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative dehydrogenase 1715560 yggP 12762053 yggP Escherichia coli KO11FL putative dehydrogenase YP_006163951.1 1714283 D 595495 CDS YP_006163952.1 386700115 12762054 1715557..1716522 1 NC_017660.1 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins; fructose-1,6-bisphosphatase II-like protein 1716522 yggF 12762054 yggF Escherichia coli KO11FL fructose-1,6-bisphosphatase II-like protein YP_006163952.1 1715557 D 595495 CDS YP_006163953.1 386700116 12762055 1716544..1717053 1 NC_017660.1 COG3722 Transcriptional regulator; putative DNA-binding transcriptional regulator 1717053 yggD 12762055 yggD Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163953.1 1716544 D 595495 CDS YP_006163954.1 386700117 12762056 1717050..1717763 1 NC_017660.1 COG1072 Panthothenate kinase; nucleoside triphosphate hydrolase domain-containing protein 1717763 yggC 12762056 yggC Escherichia coli KO11FL nucleoside triphosphate hydrolase domain-containing protein YP_006163954.1 1717050 D 595495 CDS YP_006163955.1 386700118 12762057 complement(1717735..1718412) 1 NC_017660.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; putative ATP-binding protein of ABC transport system 1718412 12762057 KO11_08110 Escherichia coli KO11FL putative ATP-binding protein of ABC transport system YP_006163955.1 1717735 R 595495 CDS YP_006163956.1 386700119 12762058 complement(1718406..1719083) 1 NC_017660.1 COG1122 ABC-type cobalt transport system, ATPase component; ABC transporter ATP-binding protein 1719083 12762058 KO11_08115 Escherichia coli KO11FL ABC transporter ATP-binding protein YP_006163956.1 1718406 R 595495 CDS YP_006163957.1 386700120 12762059 complement(1719071..1719778) 1 NC_017660.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; putative lipoprotein 1719778 12762059 KO11_08120 Escherichia coli KO11FL putative lipoprotein YP_006163957.1 1719071 R 595495 CDS YP_006163958.1 386700121 12762060 complement(1719779..1720357) 1 NC_017660.1 putative transporter 1720357 12762060 KO11_08125 Escherichia coli KO11FL putative transporter YP_006163958.1 1719779 R 595495 CDS YP_006163959.1 386700122 12762061 complement(1720380..1720811) 1 NC_017660.1 COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif; hypothetical protein 1720811 12762061 KO11_08130 Escherichia coli KO11FL hypothetical protein YP_006163959.1 1720380 R 595495 CDS YP_006163960.1 386700123 12762062 1721183..1722202 1 NC_017660.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; erythrose 4-phosphate dehydrogenase 1722202 epd 12762062 epd Escherichia coli KO11FL erythrose 4-phosphate dehydrogenase YP_006163960.1 1721183 D 595495 CDS YP_006163961.1 386700124 12762063 1722252..1723415 1 NC_017660.1 COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase 1723415 pgk 12762063 pgk Escherichia coli KO11FL phosphoglycerate kinase YP_006163961.1 1722252 D 595495 CDS YP_006163962.1 386700125 12762064 1723630..1724709 1 NC_017660.1 COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 1724709 fbaA 12762064 fbaA Escherichia coli KO11FL fructose-bisphosphate aldolase YP_006163962.1 1723630 D 595495 CDS YP_006163963.1 386700126 12762065 1725067..1725927 1 NC_017660.1 COG0668 Small-conductance mechanosensitive channel; mechanosensitive channel MscS 1725927 mcsS 12762065 mcsS Escherichia coli KO11FL mechanosensitive channel MscS YP_006163963.1 1725067 D 595495 CDS YP_006163964.1 386700127 12762066 1726066..1726701 1 NC_017660.1 COG1279 Lysine efflux permease; arginine exporter protein 1726701 argO 12762066 argO Escherichia coli KO11FL arginine exporter protein YP_006163964.1 1726066 D 595495 CDS YP_006163965.1 386700128 12762067 1726794..1727534 1 NC_017660.1 COG2968 Uncharacterized conserved protein; oxidative stress defense protein 1727534 yggE 12762067 yggE Escherichia coli KO11FL oxidative stress defense protein YP_006163965.1 1726794 D 595495 CDS YP_006163966.1 386700129 12762068 1727701..1728597 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 1728597 ygfI 12762068 ygfI Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006163966.1 1727701 D 595495 CDS YP_006163967.1 386700130 12762069 complement(1728594..1730072) 1 NC_017660.1 COG0427 Acetyl-CoA hydrolase; acetyl-CoA hydrolase 1730072 scpC 12762069 scpC Escherichia coli KO11FL acetyl-CoA hydrolase YP_006163967.1 1728594 R 595495 CDS YP_006163968.1 386700131 12762070 complement(1730096..1730881) 1 NC_017660.1 COG1024 Enoyl-CoA hydratase/carnithine racemase; methylmalonyl-CoA decarboxylase 1730881 scpB 12762070 scpB Escherichia coli KO11FL methylmalonyl-CoA decarboxylase YP_006163968.1 1730096 R 595495 CDS YP_006163969.1 386700132 12762071 complement(1730892..1731887) 1 NC_017660.1 COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family; membrane ATPase/protein kinase 1731887 argK 12762071 argK Escherichia coli KO11FL membrane ATPase/protein kinase YP_006163969.1 1730892 R 595495 CDS YP_006163970.1 386700133 12762072 complement(1731880..1734024) 1 NC_017660.1 COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit; methylmalonyl-CoA mutase 1734024 scpA 12762072 scpA Escherichia coli KO11FL methylmalonyl-CoA mutase YP_006163970.1 1731880 R 595495 CDS YP_006163971.1 386700134 12762073 complement(1734228..1735121) 1 NC_017660.1 COG0583 Transcriptional regulator; chromosome replication initiation inhibitor protein 1735121 argP 12762073 argP Escherichia coli KO11FL chromosome replication initiation inhibitor protein YP_006163971.1 1734228 R 595495 CDS YP_006163972.1 386700135 12762074 1735263..1735493 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 1735493 yqfE 12762074 yqfE Escherichia coli KO11FL LysR family transcriptional regulator YP_006163972.1 1735263 D 595495 CDS YP_006163973.1 386700136 12762075 1735549..1736208 1 NC_017660.1 COG0120 Ribose 5-phosphate isomerase; ribose-5-phosphate isomerase A 1736208 rpiA 12762075 rpiA Escherichia coli KO11FL ribose-5-phosphate isomerase A YP_006163973.1 1735549 D 595495 CDS YP_006163974.1 386700137 12762076 1736463..1737695 1 NC_017660.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 1737695 serA 12762076 serA Escherichia coli KO11FL D-3-phosphoglycerate dehydrogenase YP_006163974.1 1736463 D 595495 CDS YP_006163975.1 386700138 12762077 complement(1738476..1739024) 1 NC_017660.1 COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1739024 ygfA 12762077 ygfA Escherichia coli KO11FL 5-formyltetrahydrofolate cyclo-ligase YP_006163975.1 1738476 R 595495 CDS YP_006163976.1 386700139 12762078 complement(1739324..1739653) 1 NC_017660.1 COG3027 Uncharacterized protein conserved in bacteria; Z-ring-associated protein 1739653 zapA 12762078 zapA Escherichia coli KO11FL Z-ring-associated protein YP_006163976.1 1739324 R 595495 CDS YP_006163977.1 386700140 12762079 1739815..1740399 1 NC_017660.1 COG3079 Uncharacterized protein conserved in bacteria; ygfB; hypothetical protein 1740399 12762079 KO11_08220 Escherichia coli KO11FL hypothetical protein YP_006163977.1 1739815 D 595495 CDS YP_006163978.1 386700141 12762080 1740425..1741750 1 NC_017660.1 COG0006 Xaa-Pro aminopeptidase; proline aminopeptidase P II 1741750 pepP 12762080 pepP Escherichia coli KO11FL proline aminopeptidase P II YP_006163978.1 1740425 D 595495 CDS YP_006163979.1 386700142 12762081 1741747..1742925 1 NC_017660.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-6-methoxyphenyl hydroxylase 1742925 ubiH 12762081 ubiH Escherichia coli KO11FL 2-octaprenyl-6-methoxyphenyl hydroxylase YP_006163979.1 1741747 D 595495 CDS YP_006163980.1 386700143 12762082 1742948..1744150 1 NC_017660.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; oxidoreductase 1744150 visC 12762082 visC Escherichia coli KO11FL oxidoreductase YP_006163980.1 1742948 D 595495 CDS YP_006163981.1 386700144 12762083 1744597..1745691 1 NC_017660.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase); glycine cleavage system aminomethyltransferase T 1745691 gcvT 12762083 gcvT Escherichia coli KO11FL glycine cleavage system aminomethyltransferase T YP_006163981.1 1744597 D 595495 CDS YP_006163982.1 386700145 12762084 1745715..1746104 1 NC_017660.1 COG0509 Glycine cleavage system H protein (lipoate-binding); glycine cleavage system protein H 1746104 gcvH 12762084 gcvH Escherichia coli KO11FL glycine cleavage system protein H YP_006163982.1 1745715 D 595495 CDS YP_006163983.1 386700146 12762085 1746223..1749096 1 NC_017660.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; glycine dehydrogenase 1749096 gcvP 12762085 gcvP Escherichia coli KO11FL glycine dehydrogenase YP_006163983.1 1746223 D 595495 CDS YP_006163984.1 386700147 12762086 1749362..1750105 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); putative NAD(P)-binding oxidoreductase 1750105 ygfF 12762086 ygfF Escherichia coli KO11FL putative NAD(P)-binding oxidoreductase YP_006163984.1 1749362 D 595495 CDS YP_006163985.1 386700148 12762087 complement(1750162..1751595) 1 NC_017660.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; 6-phospho-beta-glucosidase 1751595 bglA 12762087 bglA Escherichia coli KO11FL 6-phospho-beta-glucosidase YP_006163985.1 1750162 R 595495 CDS YP_006163986.1 386700149 12762088 1751640..1751951 1 NC_017660.1 COG3097 Uncharacterized protein conserved in bacteria; yqfB; hypothetical protein 1751951 12762088 KO11_08265 Escherichia coli KO11FL hypothetical protein YP_006163986.1 1751640 D 595495 CDS YP_006163987.1 386700150 12762089 1752115..1752774 1 NC_017660.1 COG1272 Predicted membrane protein, hemolysin III homolog; hemolysin 1752774 yqfA 12762089 yqfA Escherichia coli KO11FL hemolysin YP_006163987.1 1752115 D 595495 CDS YP_006163988.1 386700151 12762090 complement(1752851..1753831) 1 NC_017660.1 COG0354 Predicted aminomethyltransferase related to GcvT; putative global regulator 1753831 ygfZ 12762090 ygfZ Escherichia coli KO11FL putative global regulator YP_006163988.1 1752851 R 595495 CDS YP_006163989.1 386700152 12762091 1754074..1754340 1 NC_017660.1 COG2938 Uncharacterized conserved protein; ygfY; hypothetical protein 1754340 12762091 KO11_08280 Escherichia coli KO11FL hypothetical protein YP_006163989.1 1754074 D 595495 CDS YP_006163990.1 386700153 12762092 1754321..1754728 1 NC_017660.1 ygfX; hypothetical protein 1754728 12762092 KO11_08285 Escherichia coli KO11FL hypothetical protein YP_006163990.1 1754321 D 595495 CDS YP_006163991.1 386700154 12762093 complement(1754768..1755289) 1 NC_017660.1 COG0716 Flavodoxins; flavodoxin FldB 1755289 fldB 12762093 fldB Escherichia coli KO11FL flavodoxin FldB YP_006163991.1 1754768 R 595495 CDS YP_006163992.1 386700155 12762094 1755401..1756297 1 NC_017660.1 COG4974 Site-specific recombinase XerD; site-specific tyrosine recombinase XerD 1756297 xerD 12762094 xerD Escherichia coli KO11FL site-specific tyrosine recombinase XerD YP_006163992.1 1755401 D 595495 CDS YP_006163993.1 386700156 12762095 1756322..1757032 1 NC_017660.1 COG1651 Protein-disulfide isomerase; protein disulfide isomerase II DsbC 1757032 dsbC 12762095 dsbC Escherichia coli KO11FL protein disulfide isomerase II DsbC YP_006163993.1 1756322 D 595495 CDS YP_006163994.1 386700157 12762096 1757038..1758771 1 NC_017660.1 COG0608 Single-stranded DNA-specific exonuclease; ssDNA exonuclease RecJ 1758771 recJ 12762096 recJ Escherichia coli KO11FL ssDNA exonuclease RecJ YP_006163994.1 1757038 D 595495 CDS YP_006163995.1 386700158 12762097 1759079..1759960 1 NC_017660.1 COG1186 Protein chain release factor B; peptide chain release factor 2 1759960 prfB 12762097 prfB Escherichia coli KO11FL peptide chain release factor 2 YP_006163995.1 1759079 D 595495 CDS YP_006163996.1 386700159 12762098 1759970..1761487 1 NC_017660.1 COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 1761487 lysS 12762098 lysS Escherichia coli KO11FL lysyl-tRNA synthetase YP_006163996.1 1759970 D 595495 CDS YP_006163997.1 386700160 12762099 complement(1761530..1762078) 1 NC_017660.1 COG1443 Isopentenyldiphosphate isomerase; isopentenyl-diphosphate delta-isomerase 1762078 idi 12762099 idi Escherichia coli KO11FL isopentenyl-diphosphate delta-isomerase YP_006163997.1 1761530 R 595495 CDS YP_006163998.1 386700161 12762100 complement(1762201..1762338) 1 NC_017660.1 yqfG; hypothetical protein 1762338 12762100 KO11_08325 Escherichia coli KO11FL hypothetical protein YP_006163998.1 1762201 R 595495 CDS YP_006163999.1 386700162 12762101 complement(1762328..1763776) 1 NC_017660.1 COG2233 Xanthine/uracil permeases; putative transporter 1763776 ygfU 12762101 ygfU Escherichia coli KO11FL putative transporter YP_006163999.1 1762328 R 595495 CDS YP_006164000.1 386700163 12762102 1764197..1766131 1 NC_017660.1 COG1142 Fe-S-cluster-containing hydrogenase components 2; putative oxidoreductase Fe-S binding subunit 1766131 ygfT 12762102 ygfT Escherichia coli KO11FL putative oxidoreductase Fe-S binding subunit YP_006164000.1 1764197 D 595495 CDS YP_006164001.1 386700164 12762103 1766131..1766619 1 NC_017660.1 COG1142 Fe-S-cluster-containing hydrogenase components 2; putative oxidoreductase 1766619 ygfS 12762103 ygfS Escherichia coli KO11FL putative oxidoreductase YP_006164001.1 1766131 D 595495 CDS YP_006164002.1 386700165 12762104 complement(1766655..1768022) 1 NC_017660.1 COG2252 Permeases; putative transporter 1768022 ygfQ 12762104 ygfQ Escherichia coli KO11FL putative transporter YP_006164002.1 1766655 R 595495 CDS YP_006164003.1 386700166 12762105 complement(1768058..1769374) 1 NC_017660.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases; guanine deaminase 1769374 guaD 12762105 guaD Escherichia coli KO11FL guanine deaminase YP_006164003.1 1768058 R 595495 CDS YP_006164004.1 386700167 12762106 complement(1769392..1770792) 1 NC_017660.1 COG2233 Xanthine/uracil permeases; putative transporter 1770792 xanQ 12762106 xanQ Escherichia coli KO11FL putative transporter YP_006164004.1 1769392 R 595495 CDS YP_006164005.1 386700168 12762107 complement(1770957..1773827) 1 NC_017660.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; putative hypoxanthine oxidase 1773827 xdhD 12762107 xdhD Escherichia coli KO11FL putative hypoxanthine oxidase YP_006164005.1 1770957 R 595495 CDS YP_006164006.1 386700169 12762108 complement(1773824..1774603) 1 NC_017660.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; putative oxidoreductase 1774603 ygfM 12762108 ygfM Escherichia coli KO11FL putative oxidoreductase YP_006164006.1 1773824 R 595495 CDS YP_006164007.1 386700170 12762109 complement(1774654..1775982) 1 NC_017660.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases; putative chlorohydrolase/aminohydrolase 1775982 ssnA 12762109 ssnA Escherichia coli KO11FL putative chlorohydrolase/aminohydrolase YP_006164007.1 1774654 R 595495 CDS YP_006164008.1 386700171 12762110 complement(1775985..1779083) 1 NC_017660.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; putative selenate reductase subunit YgfK 1779083 ygfK 12762110 ygfK Escherichia coli KO11FL putative selenate reductase subunit YgfK YP_006164008.1 1775985 R 595495 CDS YP_006164009.1 386700172 12762111 complement(1779405..1779983) 1 NC_017660.1 COG2068 Uncharacterized MobA-related protein; mocA; hypothetical protein 1779983 12762111 KO11_08380 Escherichia coli KO11FL hypothetical protein YP_006164009.1 1779405 R 595495 CDS YP_006164010.1 386700173 12762112 1780149..1780856 1 NC_017660.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase; yqeC; hypothetical protein 1780856 12762112 KO11_08385 Escherichia coli KO11FL hypothetical protein YP_006164010.1 1780149 D 595495 CDS YP_006164011.1 386700174 12762113 1780904..1782529 1 NC_017660.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; yqeB; hypothetical protein 1782529 12762113 KO11_08390 Escherichia coli KO11FL hypothetical protein YP_006164011.1 1780904 D 595495 CDS YP_006164012.1 386700175 12762114 complement(1782570..1783502) 1 NC_017660.1 COG0549 Carbamate kinase; putative amino acid kinase 1783502 yqeA 12762114 yqeA Escherichia coli KO11FL putative amino acid kinase YP_006164012.1 1782570 R 595495 CDS YP_006164013.1 386700176 12762115 complement(1783550..1784935) 1 NC_017660.1 COG0044 Dihydroorotase and related cyclic amidohydrolases; phenylhydantoinase 1784935 hyuA 12762115 hyuA Escherichia coli KO11FL phenylhydantoinase YP_006164013.1 1783550 R 595495 CDS YP_006164014.1 386700177 12762116 complement(1784988..1786199) 1 NC_017660.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; peptidase 1786199 ygeY 12762116 ygeY Escherichia coli KO11FL peptidase YP_006164014.1 1784988 R 595495 CDS YP_006164015.1 386700178 12762117 complement(1786257..1787453) 1 NC_017660.1 COG1171 Threonine dehydratase; diaminopropionate ammonia-lyase 1787453 ygeX 12762117 ygeX Escherichia coli KO11FL diaminopropionate ammonia-lyase YP_006164015.1 1786257 R 595495 CDS YP_006164016.1 386700179 12762118 complement(1787511..1788698) 1 NC_017660.1 COG0078 Ornithine carbamoyltransferase; aspartate/ornithine carbamoyltransferase family protein 1788698 ygeW 12762118 ygeW Escherichia coli KO11FL aspartate/ornithine carbamoyltransferase family protein YP_006164016.1 1787511 R 595495 CDS YP_006164017.1 386700180 12762119 1789177..1790955 1 NC_017660.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; putative DNA-binding transcriptional regulator 1790955 ygeV 12762119 ygeV Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006164017.1 1789177 D 595495 CDS YP_006164018.1 386700181 12762120 complement(1790995..1791474) 1 NC_017660.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; xanthine dehydrogenase subunit XdhC 1791474 xdhC 12762120 xdhC Escherichia coli KO11FL xanthine dehydrogenase subunit XdhC YP_006164018.1 1790995 R 595495 CDS YP_006164019.1 386700182 12762121 complement(1791471..1792349) 1 NC_017660.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; xanthine dehydrogenase subunit XdhB 1792349 xdhB 12762121 xdhB Escherichia coli KO11FL xanthine dehydrogenase subunit XdhB YP_006164019.1 1791471 R 595495 CDS YP_006164020.1 386700183 12762122 complement(1792360..1794657) 1 NC_017660.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; xanthine dehydrogenase subunit XdhA 1794657 xdhA 12762122 xdhA Escherichia coli KO11FL xanthine dehydrogenase subunit XdhA YP_006164020.1 1792360 R 595495 CDS YP_006164021.1 386700184 12762123 1795072..1795827 1 NC_017660.1 COG0739 Membrane proteins related to metalloendopeptidases; Tetratricopeptide repeat transcriptional regulator 1795827 ygeR 12762123 ygeR Escherichia coli KO11FL Tetratricopeptide repeat transcriptional regulator YP_006164021.1 1795072 D 595495 CDS YP_006164022.1 386700185 12762125 1796171..1797823 1 NC_017660.1 ygeQ; hypothetical protein 1797823 12762125 KO11_08445 Escherichia coli KO11FL hypothetical protein YP_006164022.1 1796171 D 595495 CDS YP_006164023.1 386700186 12762126 1797955..1798320 1 NC_017660.1 type III secretion system protein SpaO 1798320 spaO 12762126 spaO Escherichia coli KO11FL type III secretion system protein SpaO YP_006164023.1 1797955 D 595495 CDS YP_006164024.1 386700187 12762127 1798381..1798902 1 NC_017660.1 COG1886 Flagellar motor switch/type III secretory pathway protein; putative type III secretion protein 1798902 12762127 KO11_08455 Escherichia coli KO11FL putative type III secretion protein YP_006164024.1 1798381 D 595495 CDS YP_006164025.1 386700188 12762128 1798892..1799557 1 NC_017660.1 COG4790 Type III secretory pathway, component EscR; type III secretion system protein SpaP 1799557 spaP 12762128 spaP Escherichia coli KO11FL type III secretion system protein SpaP YP_006164025.1 1798892 D 595495 CDS YP_006164026.1 386700189 12762129 complement(1799620..1800828) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 1800828 12762129 KO11_08465 Escherichia coli KO11FL IS10 transposase YP_006164026.1 1799620 R 595495 CDS YP_006164027.1 386700190 12762130 1801166..1801933 1 NC_017660.1 COG4791 Type III secretory pathway, component EscT; type III secretion apparatus protein SpaR/YscT/HrcT 1801933 12762130 KO11_08470 Escherichia coli KO11FL type III secretion apparatus protein SpaR/YscT/HrcT YP_006164027.1 1801166 D 595495 CDS YP_006164028.1 386700191 12762131 1801942..1802673 1 NC_017660.1 COG1377 Flagellar biosynthesis pathway, component FlhB; putative type III secretion protein 1802673 12762131 KO11_08475 Escherichia coli KO11FL putative type III secretion protein YP_006164028.1 1801942 D 595495 CDS YP_006164029.1 386700192 12762132 1802670..1803062 1 NC_017660.1 COG1377 Flagellar biosynthesis pathway, component FlhB; putative type III secretion protein 1803062 12762132 KO11_08480 Escherichia coli KO11FL putative type III secretion protein YP_006164029.1 1802670 D 595495 CDS YP_006164030.1 386700193 12762133 complement(1803123..1803416) 1 NC_017660.1 hypothetical protein 1803416 12762133 KO11_08485 Escherichia coli KO11FL hypothetical protein YP_006164030.1 1803123 R 595495 CDS YP_006164031.1 386700194 12762134 complement(1803487..1803918) 1 NC_017660.1 COG2771 DNA-binding HTH domain-containing proteins; putative transcriptional regulator 1803918 etrA 12762134 etrA Escherichia coli KO11FL putative transcriptional regulator YP_006164031.1 1803487 R 595495 CDS YP_006164032.1 386700195 12762135 1804167..1805357 1 NC_017660.1 Putative Type III secretion EprH protein 1805357 eprH 12762135 eprH Escherichia coli KO11FL Putative Type III secretion EprH protein YP_006164032.1 1804167 D 595495 CDS YP_006164033.1 386700196 12762136 1805371..1805526 1 NC_017660.1 type III secretion protein EprI 1805526 eprI 12762136 eprI Escherichia coli KO11FL type III secretion protein EprI YP_006164033.1 1805371 D 595495 CDS YP_006164034.1 386700197 12762137 1805631..1805918 1 NC_017660.1 type III secretion protein EprJ 1805918 eprJ 12762137 eprJ Escherichia coli KO11FL type III secretion protein EprJ YP_006164034.1 1805631 D 595495 CDS YP_006164035.1 386700198 12762138 1806053..1806169 1 NC_017660.1 hypothetical protein 1806169 12762138 KO11_08510 Escherichia coli KO11FL hypothetical protein YP_006164035.1 1806053 D 595495 CDS YP_006164036.1 386700199 12762139 1806157..1806693 1 NC_017660.1 COG4669 Type III secretory pathway, lipoprotein EscJ; type III secretion system lipoprotein EprK 1806693 eprK 12762139 eprK Escherichia coli KO11FL type III secretion system lipoprotein EprK YP_006164036.1 1806157 D 595495 CDS YP_006164037.1 386700200 12762140 1807134..1807289 1 NC_017660.1 ygeO; hypothetical protein 1807289 12762140 KO11_08520 Escherichia coli KO11FL hypothetical protein YP_006164037.1 1807134 D 595495 CDS YP_006164038.1 386700201 12762141 1807506..1807937 1 NC_017660.1 ygeM; hypothetical protein 1807937 12762141 KO11_08522 Escherichia coli KO11FL hypothetical protein YP_006164038.1 1807506 D 595495 CDS YP_006164039.1 386700202 12762143 complement(1808835..1809209) 1 NC_017660.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); putative peptidoglycan-binding-like protein precursor 1809209 ygeJ 12762143 ygeJ Escherichia coli KO11FL putative peptidoglycan-binding-like protein precursor YP_006164039.1 1808835 R 595495 CDS YP_006164040.1 386700203 12762144 complement(1809394..1809612) 1 NC_017660.1 ygeI; hypothetical protein 1809612 12762144 KO11_08542 Escherichia coli KO11FL hypothetical protein YP_006164040.1 1809394 R 595495 CDS YP_006164041.1 386700204 12762145 complement(1809779..1811155) 1 NC_017660.1 COG3710 DNA-binding winged-HTH domains; transcriptional regulator 1811155 ygeH 12762145 ygeH Escherichia coli KO11FL transcriptional regulator YP_006164041.1 1809779 R 595495 CDS YP_006164042.1 386700205 12762146 complement(1811490..1811981) 1 NC_017660.1 COG0457 FOG: TPR repeat; putative chaperone 1811981 ygeG 12762146 ygeG Escherichia coli KO11FL putative chaperone YP_006164042.1 1811490 R 595495 CDS YP_006164043.1 386700206 12762147 complement(1812259..1812696) 1 NC_017660.1 ygeF; hypothetical protein 1812696 12762147 KO11_08555 Escherichia coli KO11FL hypothetical protein YP_006164043.1 1812259 R 595495 CDS YP_006164044.1 386700207 12762148 1812890..1813315 1 NC_017660.1 yqeK; hypothetical protein 1813315 12762148 KO11_08557 Escherichia coli KO11FL hypothetical protein YP_006164044.1 1812890 D 595495 CDS YP_006164045.1 386700208 12762149 1813351..1813431 1 NC_017660.1 yqeL; hypothetical protein 1813431 12762149 KO11_08560 Escherichia coli KO11FL hypothetical protein YP_006164045.1 1813351 D 595495 CDS YP_006164046.1 386700209 12762150 complement(1813464..1813946) 1 NC_017660.1 yqeJ; hypothetical protein 1813946 12762150 KO11_08565 Escherichia coli KO11FL hypothetical protein YP_006164046.1 1813464 R 595495 CDS YP_006164047.1 386700210 12762151 complement(1813939..1814748) 1 NC_017660.1 COG3710 DNA-binding winged-HTH domains; putative transcriptional regulator 1814748 yqeI 12762151 yqeI Escherichia coli KO11FL putative transcriptional regulator YP_006164047.1 1813939 R 595495 CDS YP_006164048.1 386700211 12762152 complement(1815082..1815714) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; yqeH; hypothetical protein 1815714 12762152 KO11_08575 Escherichia coli KO11FL hypothetical protein YP_006164048.1 1815082 R 595495 CDS YP_006164049.1 386700212 12762153 complement(1816174..1817403) 1 NC_017660.1 COG0814 Amino acid permeases; putative transporter protein 1817403 yqeG 12762153 yqeG Escherichia coli KO11FL putative transporter protein YP_006164049.1 1816174 R 595495 CDS YP_006164050.1 386700213 12762154 1817658..1818839 1 NC_017660.1 COG0183 Acetyl-CoA acetyltransferase; putative acyltransferase 1818839 yqeF 12762154 yqeF Escherichia coli KO11FL putative acyltransferase YP_006164050.1 1817658 D 595495 CDS YP_006164051.1 386700214 12762155 1819126..1819962 1 NC_017660.1 COG3717 5-keto 4-deoxyuronate isomerase; 5-keto-4-deoxyuronate isomerase 1819962 kduI 12762155 kduI Escherichia coli KO11FL 5-keto-4-deoxyuronate isomerase YP_006164051.1 1819126 D 595495 CDS YP_006164052.1 386700215 12762156 1819992..1820753 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 2-deoxy-D-gluconate 3-dehydrogenase 1820753 kduD 12762156 kduD Escherichia coli KO11FL 2-deoxy-D-gluconate 3-dehydrogenase YP_006164052.1 1819992 D 595495 CDS YP_006164053.1 386700216 12762157 1821068..1822486 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; Arabinose-proton symporter 1822486 araE 12762157 araE Escherichia coli KO11FL Arabinose-proton symporter YP_006164053.1 1821068 D 595495 CDS YP_006164054.1 386700217 12762158 1822615..1823307 1 NC_017660.1 COG1794 Aspartate racemase; putative racemase 1823307 ygeA 12762158 ygeA Escherichia coli KO11FL putative racemase YP_006164054.1 1822615 D 595495 CDS YP_006164055.1 386700218 12762159 complement(1823294..1824229) 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional regulator LysR 1824229 lysR 12762159 lysR Escherichia coli KO11FL DNA-binding transcriptional regulator LysR YP_006164055.1 1823294 R 595495 CDS YP_006164056.1 386700219 12762160 1824351..1825613 1 NC_017660.1 COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 1825613 lysA 12762160 lysA Escherichia coli KO11FL diaminopimelate decarboxylase YP_006164056.1 1824351 D 595495 CDS YP_006164057.1 386700220 12762161 complement(1825620..1826651) 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional regulator GalR 1826651 galR 12762161 galR Escherichia coli KO11FL DNA-binding transcriptional regulator GalR YP_006164057.1 1825620 R 595495 CDS YP_006164058.1 386700221 12762162 1827237..1829396 1 NC_017660.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 1829396 aas 12762162 aas Escherichia coli KO11FL bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase YP_006164058.1 1827237 D 595495 CDS YP_006164059.1 386700222 12762163 1829389..1830582 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; lysophospholipid transporter LplT 1830582 lplT 12762163 lplT Escherichia coli KO11FL lysophospholipid transporter LplT YP_006164059.1 1829389 D 595495 CDS YP_006164060.1 386700223 12762164 complement(1830614..1831654) 1 NC_017660.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative aldo-keto reductase 1831654 tas 12762164 tas Escherichia coli KO11FL putative aldo-keto reductase YP_006164060.1 1830614 R 595495 CDS YP_006164061.1 386700224 12762165 complement(1831762..1831980) 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; ygdR; hypothetical protein 1831980 12762165 KO11_08640 Escherichia coli KO11FL hypothetical protein YP_006164061.1 1831762 R 595495 CDS YP_006164062.1 386700225 12762166 complement(1832118..1832831) 1 NC_017660.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance; ygdQ; hypothetical protein 1832831 12762166 KO11_08645 Escherichia coli KO11FL hypothetical protein YP_006164062.1 1832118 R 595495 CDS YP_006164063.1 386700226 12762167 complement(1832900..1833589) 1 NC_017660.1 COG3066 DNA mismatch repair protein; DNA mismatch repair protein 1833589 mutH 12762167 mutH Escherichia coli KO11FL DNA mismatch repair protein YP_006164063.1 1832900 R 595495 CDS YP_006164064.1 386700227 12762168 1834274..1834804 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase 1834804 rppH 12762168 rppH Escherichia coli KO11FL RNA pyrophosphohydrolase YP_006164064.1 1834274 D 595495 CDS YP_006164065.1 386700228 12762169 1834817..1837063 1 NC_017660.1 COG3605 Signal transduction protein containing GAF and PtsI domains; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain 1837063 ptsP 12762169 ptsP Escherichia coli KO11FL fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain YP_006164065.1 1834817 D 595495 CDS YP_006164066.1 386700229 12762170 1837214..1838089 1 NC_017660.1 COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase 1838089 lgt 12762170 lgt Escherichia coli KO11FL prolipoprotein diacylglyceryl transferase YP_006164066.1 1837214 D 595495 CDS YP_006164067.1 386700230 12762171 1838096..1838890 1 NC_017660.1 COG0207 Thymidylate synthase; thymidylate synthase 1838890 thyA 12762171 thyA Escherichia coli KO11FL thymidylate synthase YP_006164067.1 1838096 D 595495 CDS YP_006164068.1 386700231 12762172 1839075..1839545 1 NC_017660.1 COG2165 Type II secretory pathway, pseudopilin PulG; ppdA; hypothetical protein 1839545 12762172 KO11_08675 Escherichia coli KO11FL hypothetical protein YP_006164068.1 1839075 D 595495 CDS YP_006164069.1 386700232 12762173 1839536..1840099 1 NC_017660.1 COG4795 Type II secretory pathway, component PulJ; ppdB; hypothetical protein 1840099 12762173 KO11_08680 Escherichia coli KO11FL hypothetical protein YP_006164069.1 1839536 D 595495 CDS YP_006164070.1 386700233 12762174 1840096..1840503 1 NC_017660.1 ygdB; hypothetical protein 1840503 12762174 KO11_08685 Escherichia coli KO11FL hypothetical protein YP_006164070.1 1840096 D 595495 CDS YP_006164071.1 386700234 12762175 1840488..1840811 1 NC_017660.1 ppdC; hypothetical protein 1840811 12762175 KO11_08690 Escherichia coli KO11FL hypothetical protein YP_006164071.1 1840488 D 595495 CDS YP_006164072.1 386700235 12762176 1840824..1844192 1 NC_017660.1 COG1330 Exonuclease V gamma subunit; exonuclease V subunit gamma 1844192 recC 12762176 recC Escherichia coli KO11FL exonuclease V subunit gamma YP_006164072.1 1840824 D 595495 CDS YP_006164073.1 386700236 12762177 1844368..1847256 1 NC_017660.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like; protease3 1847256 ptrA 12762177 ptrA Escherichia coli KO11FL protease3 YP_006164073.1 1844368 D 595495 CDS YP_006164074.1 386700237 12762178 1847249..1850791 1 NC_017660.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); exonuclease V subunit beta 1850791 recB 12762178 recB Escherichia coli KO11FL exonuclease V subunit beta YP_006164074.1 1847249 D 595495 CDS YP_006164075.1 386700238 12762179 1850791..1852617 1 NC_017660.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; exonuclease V subunit alpha 1852617 recD 12762179 recD Escherichia coli KO11FL exonuclease V subunit alpha YP_006164075.1 1850791 D 595495 CDS YP_006164076.1 386700239 12762180 complement(1852679..1854010) 1 NC_017660.1 COG0548 Acetylglutamate kinase; N-acetylglutamate synthase 1854010 argA 12762180 argA Escherichia coli KO11FL N-acetylglutamate synthase YP_006164076.1 1852679 R 595495 CDS YP_006164077.1 386700240 12762181 1854242..1855495 1 NC_017660.1 COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1855495 amiC 12762181 amiC Escherichia coli KO11FL N-acetylmuramoyl-L-alanine amidase YP_006164077.1 1854242 D 595495 CDS YP_006164078.1 386700241 12762182 complement(1855841..1856389) 1 NC_017660.1 hypothetical protein 1856389 12762182 KO11_08725 Escherichia coli KO11FL hypothetical protein YP_006164078.1 1855841 R 595495 CDS YP_006164079.1 386700242 12762183 complement(1856454..1857830) 1 NC_017660.1 COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein 1857830 12762183 KO11_08730 Escherichia coli KO11FL hypothetical protein YP_006164079.1 1856454 R 595495 CDS YP_006164080.1 386700243 12762184 complement(1857830..1858258) 1 NC_017660.1 COG3518 Uncharacterized protein conserved in bacteria; hypothetical protein 1858258 12762184 KO11_08735 Escherichia coli KO11FL hypothetical protein YP_006164080.1 1857830 R 595495 CDS YP_006164081.1 386700244 12762185 complement(1858262..1858798) 1 NC_017660.1 COG3521 Uncharacterized protein conserved in bacteria; hypothetical protein 1858798 12762185 KO11_08740 Escherichia coli KO11FL hypothetical protein YP_006164081.1 1858262 R 595495 CDS YP_006164082.1 386700245 12762186 complement(1858779..1859858) 1 NC_017660.1 COG3520 Uncharacterized protein conserved in bacteria; hypothetical protein 1859858 12762186 KO11_08745 Escherichia coli KO11FL hypothetical protein YP_006164082.1 1858779 R 595495 CDS YP_006164083.1 386700246 12762187 complement(1859822..1861582) 1 NC_017660.1 COG3519 Uncharacterized protein conserved in bacteria; type VI secretion system protein ImpG 1861582 12762187 KO11_08750 Escherichia coli KO11FL type VI secretion system protein ImpG YP_006164083.1 1859822 R 595495 CDS YP_006164084.1 386700247 12762188 complement(1862142..1862564) 1 NC_017660.1 hypothetical protein 1862564 12762188 KO11_08755 Escherichia coli KO11FL hypothetical protein YP_006164084.1 1862142 R 595495 CDS YP_006164085.1 386700248 12762189 complement(1862557..1862661) 1 NC_017660.1 hypothetical protein 1862661 12762189 KO11_08760 Escherichia coli KO11FL hypothetical protein YP_006164085.1 1862557 R 595495 CDS YP_006164086.1 386700249 12762190 complement(1862661..1862855) 1 NC_017660.1 hypothetical protein 1862855 12762190 KO11_08765 Escherichia coli KO11FL hypothetical protein YP_006164086.1 1862661 R 595495 CDS YP_006164087.1 386700250 12762191 complement(1863235..1863597) 1 NC_017660.1 COG1843 Flagellar hook capping protein; hypothetical protein 1863597 12762191 KO11_08770 Escherichia coli KO11FL hypothetical protein YP_006164087.1 1863235 R 595495 CDS YP_006164088.1 386700251 12762192 1863590..1863901 1 NC_017660.1 COG2963 Transposase and inactivated derivatives; putative IS602 transposase OrfA 1863901 12762192 KO11_08775 Escherichia coli KO11FL putative IS602 transposase OrfA YP_006164088.1 1863590 D 595495 CDS YP_006164089.1 386700252 12762193 1864090..1864767 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; putative IS602 transposase OrfB 1864767 12762193 KO11_08780 Escherichia coli KO11FL putative IS602 transposase OrfB YP_006164089.1 1864090 D 595495 CDS YP_006164090.1 386700253 12762194 complement(1864760..1865236) 1 NC_017660.1 COG4104 Uncharacterized conserved protein; hypothetical protein 1865236 12762194 KO11_08785 Escherichia coli KO11FL hypothetical protein YP_006164090.1 1864760 R 595495 CDS YP_006164091.1 386700254 12762195 complement(1865242..1866600) 1 NC_017660.1 COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein 1866600 12762195 KO11_08790 Escherichia coli KO11FL hypothetical protein YP_006164091.1 1865242 R 595495 CDS YP_006164092.1 386700255 12762196 complement(1867145..1867252) 1 NC_017660.1 hypothetical protein 1867252 12762196 KO11_08795 Escherichia coli KO11FL hypothetical protein YP_006164092.1 1867145 R 595495 CDS YP_006164093.1 386700256 12762197 complement(1867307..1867705) 1 NC_017660.1 hypothetical protein 1867705 12762197 KO11_08800 Escherichia coli KO11FL hypothetical protein YP_006164093.1 1867307 R 595495 CDS YP_006164094.1 386700257 12762198 complement(1867702..1868619) 1 NC_017660.1 COG4104 Uncharacterized conserved protein; hypothetical protein 1868619 12762198 KO11_08805 Escherichia coli KO11FL hypothetical protein YP_006164094.1 1867702 R 595495 CDS YP_006164095.1 386700258 12762199 complement(1868625..1870262) 1 NC_017660.1 COG3515 Uncharacterized protein conserved in bacteria; hypothetical protein 1870262 12762199 KO11_08810 Escherichia coli KO11FL hypothetical protein YP_006164095.1 1868625 R 595495 CDS YP_006164096.1 386700259 12762200 complement(1870228..1873617) 1 NC_017660.1 COG3523 Uncharacterized protein conserved in bacteria; hypothetical protein 1873617 12762200 KO11_08815 Escherichia coli KO11FL hypothetical protein YP_006164096.1 1870228 R 595495 CDS YP_006164097.1 386700260 12762201 complement(1873617..1874831) 1 NC_017660.1 hypothetical protein 1874831 12762201 KO11_08820 Escherichia coli KO11FL hypothetical protein YP_006164097.1 1873617 R 595495 CDS YP_006164098.1 386700261 12762202 complement(1874909..1875460) 1 NC_017660.1 hypothetical protein 1875460 12762202 KO11_08825 Escherichia coli KO11FL hypothetical protein YP_006164098.1 1874909 R 595495 CDS YP_006164099.1 386700262 12762203 complement(1875462..1875884) 1 NC_017660.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); hypothetical protein 1875884 12762203 KO11_08830 Escherichia coli KO11FL hypothetical protein YP_006164099.1 1875462 R 595495 CDS YP_006164100.1 386700263 12762204 complement(1876085..1878592) 1 NC_017660.1 COG3501 Uncharacterized protein conserved in bacteria; hypothetical protein 1878592 12762204 KO11_08835 Escherichia coli KO11FL hypothetical protein YP_006164100.1 1876085 R 595495 CDS YP_006164101.1 386700264 12762205 complement(1878917..1879453) 1 NC_017660.1 hypothetical protein 1879453 12762205 KO11_08840 Escherichia coli KO11FL hypothetical protein YP_006164101.1 1878917 R 595495 CDS YP_006164102.1 386700265 12762206 complement(1879443..1880294) 1 NC_017660.1 hypothetical protein 1880294 12762206 KO11_08845 Escherichia coli KO11FL hypothetical protein YP_006164102.1 1879443 R 595495 CDS YP_006164103.1 386700266 12762207 complement(1880296..1882782) 1 NC_017660.1 COG3501 Uncharacterized protein conserved in bacteria; putative VGR-like protein 1882782 12762207 KO11_08850 Escherichia coli KO11FL putative VGR-like protein YP_006164103.1 1880296 R 595495 CDS YP_006164104.1 386700267 12762208 complement(1882794..1885439) 1 NC_017660.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; ATPase 1885439 12762208 KO11_08855 Escherichia coli KO11FL ATPase YP_006164104.1 1882794 R 595495 CDS YP_006164105.1 386700268 12762209 complement(1885630..1886121) 1 NC_017660.1 COG3157 Hemolysin-coregulated protein (uncharacterized); Hcp-like protein 1886121 12762209 KO11_08860 Escherichia coli KO11FL Hcp-like protein YP_006164105.1 1885630 R 595495 CDS YP_006164106.1 386700269 12762210 complement(1886179..1887831) 1 NC_017660.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; putative outer membrane lipoprotein 1887831 12762210 KO11_08865 Escherichia coli KO11FL putative outer membrane lipoprotein YP_006164106.1 1886179 R 595495 CDS YP_006164107.1 386700270 12762211 complement(1887844..1888509) 1 NC_017660.1 COG3455 Uncharacterized protein conserved in bacteria; type VI secretion system protein ImpK 1888509 12762211 KO11_08870 Escherichia coli KO11FL type VI secretion system protein ImpK YP_006164107.1 1887844 R 595495 CDS YP_006164108.1 386700271 12762212 complement(1888506..1889843) 1 NC_017660.1 COG3522 Uncharacterized protein conserved in bacteria; hypothetical protein 1889843 12762212 KO11_08875 Escherichia coli KO11FL hypothetical protein YP_006164108.1 1888506 R 595495 CDS YP_006164109.1 386700272 12762213 complement(1889861..1891399) 1 NC_017660.1 COG3517 Uncharacterized protein conserved in bacteria; hypothetical protein 1891399 12762213 KO11_08880 Escherichia coli KO11FL hypothetical protein YP_006164109.1 1889861 R 595495 CDS YP_006164110.1 386700273 12762214 complement(1891458..1891958) 1 NC_017660.1 COG3516 Uncharacterized protein conserved in bacteria; hypothetical protein 1891958 12762214 KO11_08885 Escherichia coli KO11FL hypothetical protein YP_006164110.1 1891458 R 595495 CDS YP_006164111.1 386700274 12762218 1893098..1894195 1 NC_017660.1 COG2821 Membrane-bound lytic murein transglycosylase; murein transglycosylase A 1894195 mltA 12762218 mltA Escherichia coli KO11FL murein transglycosylase A YP_006164111.1 1893098 D 595495 CDS YP_006164112.1 386700275 12762219 1894272..1895078 1 NC_017660.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; sulfur acceptor protein CsdL 1895078 csdL 12762219 csdL Escherichia coli KO11FL sulfur acceptor protein CsdL YP_006164112.1 1894272 D 595495 CDS YP_006164113.1 386700276 12762220 complement(1895129..1895572) 1 NC_017660.1 COG2166 SufE protein probably involved in Fe-S center assembly; CsdA-binding activator 1895572 csdE 12762220 csdE Escherichia coli KO11FL CsdA-binding activator YP_006164113.1 1895129 R 595495 CDS YP_006164114.1 386700277 12762221 complement(1895572..1896777) 1 NC_017660.1 COG0520 Selenocysteine lyase; cysteine sulfinate desulfinase 1896777 csdA 12762221 csdA Escherichia coli KO11FL cysteine sulfinate desulfinase YP_006164114.1 1895572 R 595495 CDS YP_006164115.1 386700278 12762222 1896969..1897196 1 NC_017660.1 ygdI; hypothetical protein 1897196 12762222 KO11_08910 Escherichia coli KO11FL hypothetical protein YP_006164115.1 1896969 D 595495 CDS YP_006164116.1 386700279 12762223 1897547..1898464 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional activator GcvA 1898464 gcvA 12762223 gcvA Escherichia coli KO11FL DNA-binding transcriptional activator GcvA YP_006164116.1 1897547 D 595495 CDS YP_006164117.1 386700280 12762224 1898483..1898878 1 NC_017660.1 COG2363 Uncharacterized small membrane protein; ygdD; hypothetical protein 1898878 12762224 KO11_08920 Escherichia coli KO11FL hypothetical protein YP_006164117.1 1898483 D 595495 CDS YP_006164118.1 386700281 12762225 1898871..1899971 1 NC_017660.1 COG2933 Predicted SAM-dependent methyltransferase; putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase 1899971 ygdE 12762225 ygdE Escherichia coli KO11FL putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase YP_006164118.1 1898871 D 595495 CDS YP_006164119.1 386700282 12762226 complement(1900015..1900746) 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional activator FucR 1900746 fucR 12762226 fucR Escherichia coli KO11FL DNA-binding transcriptional activator FucR YP_006164119.1 1900015 R 595495 CDS YP_006164120.1 386700283 12762227 complement(1900804..1901226) 1 NC_017660.1 COG4154 Fucose dissimilation pathway protein FucU; L-fucose mutarotase 1901226 fucU 12762227 fucU Escherichia coli KO11FL L-fucose mutarotase YP_006164120.1 1900804 R 595495 CDS YP_006164121.1 386700284 12762228 complement(1901228..1902646) 1 NC_017660.1 COG1070 Sugar (pentulose and hexulose) kinases; L-fuculokinase 1902646 fucK 12762228 fucK Escherichia coli KO11FL L-fuculokinase YP_006164121.1 1901228 R 595495 CDS YP_006164122.1 386700285 12762229 complement(1902755..1904530) 1 NC_017660.1 COG2407 L-fucose isomerase and related proteins; L-fucose isomerase 1904530 fucI 12762229 fucI Escherichia coli KO11FL L-fucose isomerase YP_006164122.1 1902755 R 595495 CDS YP_006164123.1 386700286 12762230 complement(1904563..1905879) 1 NC_017660.1 COG0738 Fucose permease; L-fucose transporter 1905879 fucP 12762230 fucP Escherichia coli KO11FL L-fucose transporter YP_006164123.1 1904563 R 595495 CDS YP_006164124.1 386700287 12762231 1906426..1907073 1 NC_017660.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-fuculose phosphate aldolase 1907073 fucA 12762231 fucA Escherichia coli KO11FL L-fuculose phosphate aldolase YP_006164124.1 1906426 D 595495 CDS YP_006164125.1 386700288 12762232 1907101..1908249 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; L-1,2-propanediol oxidoreductase 1908249 fucO 12762232 fucO Escherichia coli KO11FL L-1,2-propanediol oxidoreductase YP_006164125.1 1907101 D 595495 CDS YP_006164126.1 386700289 12762233 complement(1908304..1909059) 1 NC_017660.1 COG0258 5-3 exonuclease (including N-terminal domain of PolI); flap endonuclease-like protein 1909059 ygdG 12762233 ygdG Escherichia coli KO11FL flap endonuclease-like protein YP_006164126.1 1908304 R 595495 CDS YP_006164127.1 386700290 12762234 complement(1909171..1910538) 1 NC_017660.1 COG1760 L-serine deaminase; L-serine deaminase II 1910538 sdaB 12762234 sdaB Escherichia coli KO11FL L-serine deaminase II YP_006164127.1 1909171 R 595495 CDS YP_006164128.1 386700291 12762235 complement(1910596..1911885) 1 NC_017660.1 COG0814 Amino acid permeases; serine transporter 1911885 sdaC 12762235 sdaC Escherichia coli KO11FL serine transporter YP_006164128.1 1910596 R 595495 CDS YP_006164129.1 386700292 12762236 complement(1912442..1913806) 1 NC_017660.1 COG1611 Predicted Rossmann fold nucleotide-binding protein; ygdH; hypothetical protein 1913806 12762236 KO11_08980 Escherichia coli KO11FL hypothetical protein YP_006164129.1 1912442 R 595495 CDS YP_006164130.1 386700293 12762237 complement(1913918..1914766) 1 NC_017660.1 COG2904 Uncharacterized protein conserved in bacteria; 7-cyano-7-deazaguanine reductase 1914766 queF 12762237 queF Escherichia coli KO11FL 7-cyano-7-deazaguanine reductase YP_006164130.1 1913918 R 595495 CDS YP_006164131.1 386700294 12762238 1914834..1915379 1 NC_017660.1 SecY interacting protein Syd 1915379 syd 12762238 syd Escherichia coli KO11FL SecY interacting protein Syd YP_006164131.1 1914834 D 595495 CDS YP_006164132.1 386700295 12762239 1916001..1916330 1 NC_017660.1 COG3098 Uncharacterized protein conserved in bacteria; yqcC; hypothetical protein 1916330 12762239 KO11_09000 Escherichia coli KO11FL hypothetical protein YP_006164132.1 1916001 D 595495 CDS YP_006164133.1 386700296 12762240 1916330..1917112 1 NC_017660.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; tRNA pseudouridine synthase C 1917112 truC 12762240 truC Escherichia coli KO11FL tRNA pseudouridine synthase C YP_006164133.1 1916330 D 595495 CDS YP_006164134.1 386700297 12762241 1917130..1917579 1 NC_017660.1 COG0716 Flavodoxins; flavodoxin 1917579 yqcA 12762241 yqcA Escherichia coli KO11FL flavodoxin YP_006164134.1 1917130 D 595495 CDS YP_006164135.1 386700298 12762242 1918014..1919366 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative D-glucarate transporter GudP 1919366 gudP 12762242 gudP Escherichia coli KO11FL putative D-glucarate transporter GudP YP_006164135.1 1918014 D 595495 CDS YP_006164136.1 386700299 12762243 1919368..1920708 1 NC_017660.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; glucarate dehydratase 1920708 gudX 12762243 gudX Escherichia coli KO11FL glucarate dehydratase YP_006164136.1 1919368 D 595495 CDS YP_006164137.1 386700300 12762244 1920729..1922069 1 NC_017660.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; (D)-glucarate dehydratase 1 1922069 gudD 12762244 gudD Escherichia coli KO11FL (D)-glucarate dehydratase 1 YP_006164137.1 1920729 D 595495 CDS YP_006164138.1 386700301 12762246 1925114..1926415 1 NC_017660.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; 23S rRNA m(5)U1939 methyltransferase 1926415 rumA 12762246 rumA Escherichia coli KO11FL 23S rRNA m(5)U1939 methyltransferase YP_006164138.1 1925114 D 595495 CDS YP_006164139.1 386700302 12762247 1926463..1928697 1 NC_017660.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; (p)ppGpp synthetase I 1928697 relA 12762247 relA Escherichia coli KO11FL (p)ppGpp synthetase I YP_006164139.1 1926463 D 595495 CDS YP_006164140.1 386700303 12762248 1928775..1929023 1 NC_017660.1 COG2336 Growth regulator; antitoxin MazE 1929023 mazE 12762248 mazE Escherichia coli KO11FL antitoxin MazE YP_006164140.1 1928775 D 595495 CDS YP_006164141.1 386700304 12762249 1929023..1929358 1 NC_017660.1 COG2337 Growth inhibitor; toxin MazF 1929358 mazF 12762249 mazF Escherichia coli KO11FL toxin MazF YP_006164141.1 1929023 D 595495 CDS YP_006164142.1 386700305 12762250 1929429..1930220 1 NC_017660.1 COG1694 Predicted pyrophosphatase; nucleoside triphosphate pyrophosphohydrolase 1930220 mazG 12762250 mazG Escherichia coli KO11FL nucleoside triphosphate pyrophosphohydrolase YP_006164142.1 1929429 D 595495 CDS YP_006164143.1 386700306 12762251 1930448..1932085 1 NC_017660.1 COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase 1932085 pyrG 12762251 pyrG Escherichia coli KO11FL CTP synthetase YP_006164143.1 1930448 D 595495 CDS YP_006164144.1 386700307 12762252 1932173..1933471 1 NC_017660.1 COG0148 Enolase; enolase 1933471 eno 12762252 eno Escherichia coli KO11FL enolase YP_006164144.1 1932173 D 595495 CDS YP_006164145.1 386700308 12762253 complement(1933531..1934403) 1 NC_017660.1 COG1512 Beta-propeller domains of methanol dehydrogenase type; ygcG; hypothetical protein 1934403 12762253 KO11_09080 Escherichia coli KO11FL hypothetical protein YP_006164145.1 1933531 R 595495 CDS YP_006164146.1 386700309 12762254 complement(1934417..1934557) 1 NC_017660.1 yqcG; hypothetical protein 1934557 12762254 KO11_09085 Escherichia coli KO11FL hypothetical protein YP_006164146.1 1934417 R 595495 CDS YP_006164147.1 386700310 12762255 1934696..1935367 1 NC_017660.1 COG0602 Organic radical activating enzymes; ygcF; hypothetical protein 1935367 12762255 KO11_09090 Escherichia coli KO11FL hypothetical protein YP_006164147.1 1934696 D 595495 CDS YP_006164148.1 386700311 12762256 complement(1936985..1938463) 1 NC_017660.1 COG1070 Sugar (pentulose and hexulose) kinases; putative kinase 1938463 ygcE 12762256 ygcE Escherichia coli KO11FL putative kinase YP_006164148.1 1936985 R 595495 CDS YP_006164149.1 386700312 12762257 complement(1938490..1939767) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 1939767 yqcE 12762257 yqcE Escherichia coli KO11FL putative transporter YP_006164149.1 1938490 R 595495 CDS YP_006164150.1 386700313 12762258 1940086..1940871 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); putative oxidoreductase 1940871 ygcW 12762258 ygcW Escherichia coli KO11FL putative oxidoreductase YP_006164150.1 1940086 D 595495 CDS YP_006164151.1 386700314 12762259 1940941..1942395 1 NC_017660.1 COG0277 FAD/FMN-containing dehydrogenases; putative FAD containing dehydrogenase 1942395 ygcU 12762259 ygcU Escherichia coli KO11FL putative FAD containing dehydrogenase YP_006164151.1 1940941 D 595495 CDS YP_006164152.1 386700315 12762260 1942417..1943826 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily protein 1943826 ygcS 12762260 ygcS Escherichia coli KO11FL major facilitator superfamily protein YP_006164152.1 1942417 D 595495 CDS YP_006164153.1 386700316 12762261 1943804..1944583 1 NC_017660.1 COG2086 Electron transfer flavoprotein, beta subunit; putative flavoprotein 1944583 ygcR 12762261 ygcR Escherichia coli KO11FL putative flavoprotein YP_006164153.1 1943804 D 595495 CDS YP_006164154.1 386700317 12762262 1944580..1945440 1 NC_017660.1 COG2025 Electron transfer flavoprotein, alpha subunit; putative flavoprotein 1945440 ygcQ 12762262 ygcQ Escherichia coli KO11FL putative flavoprotein YP_006164154.1 1944580 D 595495 CDS YP_006164155.1 386700318 12762263 complement(1945588..1946163) 1 NC_017660.1 COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding); putative anti-terminator regulatory protein 1946163 ygcP 12762263 ygcP Escherichia coli KO11FL putative anti-terminator regulatory protein YP_006164155.1 1945588 R 595495 CDS YP_006164156.1 386700319 12762264 complement(1946180..1946440) 1 NC_017660.1 COG2440 Ferredoxin-like protein; ygcO; hypothetical protein 1946440 12762264 KO11_09135 Escherichia coli KO11FL hypothetical protein YP_006164156.1 1946180 R 595495 CDS YP_006164157.1 386700320 12762265 complement(1946431..1947702) 1 NC_017660.1 COG0644 Dehydrogenases (flavoproteins); ygcN; hypothetical protein 1947702 12762265 KO11_09140 Escherichia coli KO11FL hypothetical protein YP_006164157.1 1946431 R 595495 CDS YP_006164158.1 386700321 12762266 complement(1947780..1948142) 1 NC_017660.1 COG0720 6-pyruvoyl-tetrahydropterin synthase; putative 6-pyruvoyl tetrahydrobiopterin synthase 1948142 sscR 12762266 sscR Escherichia coli KO11FL putative 6-pyruvoyl tetrahydrobiopterin synthase YP_006164158.1 1947780 R 595495 CDS YP_006164159.1 386700322 12762267 1948461..1950260 1 NC_017660.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein); sulfite reductase subunit alpha 1950260 cysJ 12762267 cysJ Escherichia coli KO11FL sulfite reductase subunit alpha YP_006164159.1 1948461 D 595495 CDS YP_006164160.1 386700323 12762268 1950260..1951972 1 NC_017660.1 COG0155 Sulfite reductase, beta subunit (hemoprotein); sulfite reductase subunit beta 1951972 cysI 12762268 cysI Escherichia coli KO11FL sulfite reductase subunit beta YP_006164160.1 1950260 D 595495 CDS YP_006164161.1 386700324 12762269 1952046..1952780 1 NC_017660.1 COG0175 3-phosphoadenosine 5-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; phosphoadenosine phosphosulfate reductase 1952780 cysH 12762269 cysH Escherichia coli KO11FL phosphoadenosine phosphosulfate reductase YP_006164161.1 1952046 D 595495 CDS YP_006164162.1 386700325 12762270 1953045..1953197 1 NC_017660.1 Hok/gef cell toxic protein 1953197 hokE3 12762270 hokE3 Escherichia coli KO11FL Hok/gef cell toxic protein YP_006164162.1 1953045 D 595495 CDS YP_006164163.1 386700326 12762271 1953392..1956091 1 NC_017660.1 COG1203 Predicted helicases; CRISPR-associated helicase Cas3 1956091 cas3 12762271 cas3 Escherichia coli KO11FL CRISPR-associated helicase Cas3 YP_006164163.1 1953392 D 595495 CDS YP_006164164.1 386700327 12762272 1956189..1957751 1 NC_017660.1 CRISPR-associated protein Cse1 1957751 cse1 12762272 cse1 Escherichia coli KO11FL CRISPR-associated protein Cse1 YP_006164164.1 1956189 D 595495 CDS YP_006164165.1 386700328 12762273 1957748..1958287 1 NC_017660.1 CRISPR-associated protein Cse2 1958287 cse2 12762273 cse2 Escherichia coli KO11FL CRISPR-associated protein Cse2 YP_006164165.1 1957748 D 595495 CDS YP_006164166.1 386700329 12762274 1958299..1959354 1 NC_017660.1 CRISPR-associated protein Cse4 1959354 cse4 12762274 cse4 Escherichia coli KO11FL CRISPR-associated protein Cse4 YP_006164166.1 1958299 D 595495 CDS YP_006164167.1 386700330 12762275 1959365..1960111 1 NC_017660.1 CRISPR-associated protein Cas5 1960111 cas5e 12762275 cas5e Escherichia coli KO11FL CRISPR-associated protein Cas5 YP_006164167.1 1959365 D 595495 CDS YP_006164168.1 386700331 12762276 1960093..1960743 1 NC_017660.1 CRISPR-associated protein Cse3 1960743 cse3 12762276 cse3 Escherichia coli KO11FL CRISPR-associated protein Cse3 YP_006164168.1 1960093 D 595495 CDS YP_006164169.1 386700332 12762277 1960740..1961660 1 NC_017660.1 COG1518 Uncharacterized protein predicted to be involved in DNA repair; CRISPR-associated protein Cas1 1961660 cas1 12762277 cas1 Escherichia coli KO11FL CRISPR-associated protein Cas1 YP_006164169.1 1960740 D 595495 CDS YP_006164170.1 386700333 12762278 1961660..1961953 1 NC_017660.1 CRISPR-associated protein 1961953 cas2 12762278 cas2 Escherichia coli KO11FL CRISPR-associated protein YP_006164170.1 1961660 D 595495 CDS YP_006164171.1 386700334 12762279 complement(1963014..1964051) 1 NC_017660.1 COG2234 Predicted aminopeptidases; alkaline phosphatase isozyme conversion aminopeptidase 1964051 iap 12762279 iap Escherichia coli KO11FL alkaline phosphatase isozyme conversion aminopeptidase YP_006164171.1 1963014 R 595495 CDS YP_006164172.1 386700335 12762280 1964303..1965211 1 NC_017660.1 COG0175 3-phosphoadenosine 5-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; sulfate adenylyltransferase subunit 2 1965211 cysD 12762280 cysD Escherichia coli KO11FL sulfate adenylyltransferase subunit 2 YP_006164172.1 1964303 D 595495 CDS YP_006164173.1 386700336 12762281 1965213..1966640 1 NC_017660.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1; sulfate adenylyltransferase subunit 1 1966640 cysN 12762281 cysN Escherichia coli KO11FL sulfate adenylyltransferase subunit 1 YP_006164173.1 1965213 D 595495 CDS YP_006164174.1 386700337 12762282 1966640..1967245 1 NC_017660.1 COG0529 Adenylylsulfate kinase and related kinases; adenylylsulfate kinase 1967245 cysC 12762282 cysC Escherichia coli KO11FL adenylylsulfate kinase YP_006164174.1 1966640 D 595495 CDS YP_006164175.1 386700338 12762283 1967295..1967618 1 NC_017660.1 COG0665 Glycine/D-amino acid oxidases (deaminating); ygbE; hypothetical protein 1967618 12762283 KO11_09230 Escherichia coli KO11FL hypothetical protein YP_006164175.1 1967295 D 595495 CDS YP_006164176.1 386700339 12762284 1967812..1968123 1 NC_017660.1 COG2919 Septum formation initiator; cell division protein FtsB 1968123 ftsB 12762284 ftsB Escherichia coli KO11FL cell division protein FtsB YP_006164176.1 1967812 D 595495 CDS YP_006164177.1 386700340 12762285 1968142..1968852 1 NC_017660.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1968852 ispD 12762285 ispD Escherichia coli KO11FL 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_006164177.1 1968142 D 595495 CDS YP_006164178.1 386700341 12762286 1968852..1969331 1 NC_017660.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1969331 ispF 12762286 ispF Escherichia coli KO11FL 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_006164178.1 1968852 D 595495 CDS YP_006164179.1 386700342 12762287 1969328..1970377 1 NC_017660.1 COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 1970377 truD 12762287 truD Escherichia coli KO11FL tRNA pseudouridine synthase D YP_006164179.1 1969328 D 595495 CDS YP_006164180.1 386700343 12762288 1970358..1971119 1 NC_017660.1 COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 1971119 surE 12762288 surE Escherichia coli KO11FL 5'(3')-nucleotidase/polyphosphatase YP_006164180.1 1970358 D 595495 CDS YP_006164181.1 386700344 12762289 1971113..1971739 1 NC_017660.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 1971739 pcm 12762289 pcm Escherichia coli KO11FL protein-L-isoaspartate O-methyltransferase YP_006164181.1 1971113 D 595495 CDS YP_006164182.1 386700345 12762290 1971879..1973018 1 NC_017660.1 COG0739 Membrane proteins related to metalloendopeptidases; lipoprotein NlpD 1973018 nlpD 12762290 nlpD Escherichia coli KO11FL lipoprotein NlpD YP_006164182.1 1971879 D 595495 CDS YP_006164183.1 386700346 12762291 1973081..1974073 1 NC_017660.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoS 1974073 rpoS 12762291 rpoS Escherichia coli KO11FL RNA polymerase sigma factor RpoS YP_006164183.1 1973081 D 595495 CDS YP_006164184.1 386700347 12762292 complement(1974194..1974601) 1 NC_017660.1 COG1846 Transcriptional regulators; transcriptional regulator hosA 1974601 hosA 12762292 hosA Escherichia coli KO11FL transcriptional regulator hosA YP_006164184.1 1974194 R 595495 CDS YP_006164185.1 386700348 12762293 1974748..1975341 1 NC_017660.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; putative phenylacrylic acid decarboxylase 1975341 12762293 KO11_09280 Escherichia coli KO11FL putative phenylacrylic acid decarboxylase YP_006164185.1 1974748 D 595495 CDS YP_006164186.1 386700349 12762294 1975341..1976768 1 NC_017660.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; putative 4-hydroxybenzoate decarboxylase 1976768 12762294 KO11_09285 Escherichia coli KO11FL putative 4-hydroxybenzoate decarboxylase YP_006164186.1 1975341 D 595495 CDS YP_006164187.1 386700350 12762295 1976779..1977015 1 NC_017660.1 hypothetical protein 1977015 12762295 KO11_09290 Escherichia coli KO11FL hypothetical protein YP_006164187.1 1976779 D 595495 CDS YP_006164188.1 386700351 12762296 complement(1977054..1978418) 1 NC_017660.1 COG2610 H+/gluconate symporter and related permeases; putative transporter 1978418 ygbN 12762296 ygbN Escherichia coli KO11FL putative transporter YP_006164188.1 1977054 R 595495 CDS YP_006164189.1 386700352 12762297 complement(1978507..1979283) 1 NC_017660.1 COG3622 Hydroxypyruvate isomerase; ygbM; hypothetical protein 1979283 12762297 KO11_09300 Escherichia coli KO11FL hypothetical protein YP_006164189.1 1978507 R 595495 CDS YP_006164190.1 386700353 12762298 complement(1979288..1979926) 1 NC_017660.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; putative aldolase 1979926 ygbL 12762298 ygbL Escherichia coli KO11FL putative aldolase YP_006164190.1 1979288 R 595495 CDS YP_006164191.1 386700354 12762299 complement(1979923..1981185) 1 NC_017660.1 COG3395 Uncharacterized protein conserved in bacteria; ygbK; hypothetical protein 1981185 12762299 KO11_09310 Escherichia coli KO11FL hypothetical protein YP_006164191.1 1979923 R 595495 CDS YP_006164192.1 386700355 12762300 complement(1981182..1982090) 1 NC_017660.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; putative dehydrogenase 1982090 ygbJ 12762300 ygbJ Escherichia coli KO11FL putative dehydrogenase YP_006164192.1 1981182 R 595495 CDS YP_006164193.1 386700356 12762301 1982286..1983053 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; DeoR family transcriptional regulator 1983053 ygbI 12762301 ygbI Escherichia coli KO11FL DeoR family transcriptional regulator YP_006164193.1 1982286 D 595495 CDS YP_006164194.1 386700357 12762302 complement(1983104..1983760) 1 NC_017660.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; serine/threonine-specific protein phosphatase 2 1983760 pphB 12762302 pphB Escherichia coli KO11FL serine/threonine-specific protein phosphatase 2 YP_006164194.1 1983104 R 595495 CDS YP_006164195.1 386700358 12762303 complement(1983866..1986427) 1 NC_017660.1 COG0249 Mismatch repair ATPase (MutS family); DNA mismatch repair protein MutS 1986427 mutS 12762303 mutS Escherichia coli KO11FL DNA mismatch repair protein MutS YP_006164195.1 1983866 R 595495 CDS YP_006164196.1 386700359 12762304 1986503..1986682 1 NC_017660.1 hypothetical protein 1986682 12762304 KO11_09335 Escherichia coli KO11FL hypothetical protein YP_006164196.1 1986503 D 595495 CDS YP_006164197.1 386700360 12762305 1986714..1987067 1 NC_017660.1 ygbA; hypothetical protein 1987067 12762305 KO11_09340 Escherichia coli KO11FL hypothetical protein YP_006164197.1 1986714 D 595495 CDS YP_006164198.1 386700361 12762306 complement(1987104..1989182) 1 NC_017660.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; formate hydrogenlyase transcriptional activator FhlA 1989182 fhlA 12762306 fhlA Escherichia coli KO11FL formate hydrogenlyase transcriptional activator FhlA YP_006164198.1 1987104 R 595495 CDS YP_006164199.1 386700362 12762307 complement(1989256..1990266) 1 NC_017660.1 COG0309 Hydrogenase maturation factor; hydrogenase expression/formation protein HypE 1990266 hypE 12762307 hypE Escherichia coli KO11FL hydrogenase expression/formation protein HypE YP_006164199.1 1989256 R 595495 CDS YP_006164200.1 386700363 12762308 complement(1990263..1991384) 1 NC_017660.1 COG0409 Hydrogenase maturation factor; hydrogenase expression/formation protein HypD 1991384 hypD 12762308 hypD Escherichia coli KO11FL hydrogenase expression/formation protein HypD YP_006164200.1 1990263 R 595495 CDS YP_006164201.1 386700364 12762309 complement(1991384..1991656) 1 NC_017660.1 COG0298 Hydrogenase maturation factor; hydrogenase assembly chaperone 1991656 hypC 12762309 hypC Escherichia coli KO11FL hydrogenase assembly chaperone YP_006164201.1 1991384 R 595495 CDS YP_006164202.1 386700365 12762310 complement(1991647..1992519) 1 NC_017660.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase nickel incorporation protein HypB 1992519 hypB 12762310 hypB Escherichia coli KO11FL hydrogenase nickel incorporation protein HypB YP_006164202.1 1991647 R 595495 CDS YP_006164203.1 386700366 12762311 complement(1992523..1992885) 1 NC_017660.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein 1992885 hypA 12762311 hypA Escherichia coli KO11FL hydrogenase nickel incorporation protein YP_006164203.1 1992523 R 595495 CDS YP_006164204.1 386700367 12762312 1992920..1993051 1 NC_017660.1 hypothetical protein 1993051 12762312 KO11_09375 Escherichia coli KO11FL hypothetical protein YP_006164204.1 1992920 D 595495 CDS YP_006164205.1 386700368 12762313 1993085..1993546 1 NC_017660.1 formate hydrogenlyase regulatory protein HycA 1993546 hycA 12762313 hycA Escherichia coli KO11FL formate hydrogenlyase regulatory protein HycA YP_006164205.1 1993085 D 595495 CDS YP_006164206.1 386700369 12762314 1993671..1994282 1 NC_017660.1 COG1142 Fe-S-cluster-containing hydrogenase components 2; Formate hydrogenlyase, subunit B 1994282 hycB 12762314 hycB Escherichia coli KO11FL Formate hydrogenlyase, subunit B YP_006164206.1 1993671 D 595495 CDS YP_006164207.1 386700370 12762315 1994279..1996105 1 NC_017660.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; formate hydrogenlyase subunit 3 1996105 hycC 12762315 hycC Escherichia coli KO11FL formate hydrogenlyase subunit 3 YP_006164207.1 1994279 D 595495 CDS YP_006164208.1 386700371 12762316 1996108..1997031 1 NC_017660.1 COG0650 Formate hydrogenlyase subunit 4; hydrogenase 3, membrane subunit 1997031 hycD 12762316 hycD Escherichia coli KO11FL hydrogenase 3, membrane subunit YP_006164208.1 1996108 D 595495 CDS YP_006164209.1 386700372 12762317 1997049..1998758 1 NC_017660.1 COG3262 Ni,Fe-hydrogenase III component G; Formate hydrogenlyase, subunit E 1998758 hycE 12762317 hycE Escherichia coli KO11FL Formate hydrogenlyase, subunit E YP_006164209.1 1997049 D 595495 CDS YP_006164210.1 386700373 12762318 1998768..1999310 1 NC_017660.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); formate hydrogenlyase complex iron-sulfur subunit 1999310 hycF 12762318 hycF Escherichia coli KO11FL formate hydrogenlyase complex iron-sulfur subunit YP_006164210.1 1998768 D 595495 CDS YP_006164211.1 386700374 12762319 1999310..2000077 1 NC_017660.1 COG3260 Ni,Fe-hydrogenase III small subunit; Formate hydrogenlyase, subunit G 2000077 hycG 12762319 hycG Escherichia coli KO11FL Formate hydrogenlyase, subunit G YP_006164211.1 1999310 D 595495 CDS YP_006164212.1 386700375 12762320 2000074..2000484 1 NC_017660.1 formate hydrogenlyase maturation protein HycH 2000484 hycH 12762320 hycH Escherichia coli KO11FL formate hydrogenlyase maturation protein HycH YP_006164212.1 2000074 D 595495 CDS YP_006164213.1 386700376 12762321 2000477..2000947 1 NC_017660.1 COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 3 maturation protease 2000947 hycI 12762321 hycI Escherichia coli KO11FL hydrogenase 3 maturation protease YP_006164213.1 2000477 D 595495 CDS YP_006164214.1 386700377 12762323 complement(2002386..2003816) 1 NC_017660.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; cryptic 6-phospho-beta-glucosidase 2003816 ascB 12762323 ascB Escherichia coli KO11FL cryptic 6-phospho-beta-glucosidase YP_006164214.1 2002386 R 595495 CDS YP_006164215.1 386700378 12762324 complement(2003819..2005276) 1 NC_017660.1 COG1264 Phosphotransferase system IIB components; PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC 2005276 ascF 12762324 ascF Escherichia coli KO11FL PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC YP_006164215.1 2003819 R 595495 CDS YP_006164216.1 386700379 12762325 2005536..2006546 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional repressor 2006546 ascG 12762325 ascG Escherichia coli KO11FL DNA-binding transcriptional repressor YP_006164216.1 2005536 D 595495 CDS YP_006164217.1 386700380 12762326 complement(2006807..2008015) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 2008015 12762326 KO11_09450 Escherichia coli KO11FL IS10 transposase YP_006164217.1 2006807 R 595495 CDS YP_006164218.1 386700381 12762327 2008285..2008560 1 NC_017660.1 COG1142 Fe-S-cluster-containing hydrogenase components 2; formate dehydrogenase-H ferredoxin subunit 2008560 hydN 12762327 hydN Escherichia coli KO11FL formate dehydrogenase-H ferredoxin subunit YP_006164218.1 2008285 D 595495 CDS YP_006164219.1 386700382 12762328 2008713..2010965 1 NC_017660.1 COG0068 Hydrogenase maturation factor; hydrogenase maturation protein 2010965 hypF 12762328 hypF Escherichia coli KO11FL hydrogenase maturation protein YP_006164219.1 2008713 D 595495 CDS YP_006164220.1 386700383 12762329 complement(2011191..2012324) 1 NC_017660.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; NADH:flavorubredoxin oxidoreductase 2012324 norW 12762329 norW Escherichia coli KO11FL NADH:flavorubredoxin oxidoreductase YP_006164220.1 2011191 R 595495 CDS YP_006164221.1 386700384 12762330 complement(2012321..2013760) 1 NC_017660.1 COG0426 Uncharacterized flavoproteins; anaerobic nitric oxide reductase flavorubredoxin 2013760 norV 12762330 norV Escherichia coli KO11FL anaerobic nitric oxide reductase flavorubredoxin YP_006164221.1 2012321 R 595495 CDS YP_006164222.1 386700385 12762331 2013947..2015461 1 NC_017660.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; anaerobic nitric oxide reductase transcriptional regulator 2015461 norR 12762331 norR Escherichia coli KO11FL anaerobic nitric oxide reductase transcriptional regulator YP_006164222.1 2013947 D 595495 CDS YP_006164223.1 386700386 12762332 complement(2015458..2016423) 1 NC_017660.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation; D-arabinose 5-phosphate isomerase 2016423 gutQ 12762332 gutQ Escherichia coli KO11FL D-arabinose 5-phosphate isomerase YP_006164223.1 2015458 R 595495 CDS YP_006164224.1 386700387 12762333 complement(2016416..2017189) 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor SrlR 2017189 srlR 12762333 srlR Escherichia coli KO11FL DNA-binding transcriptional repressor SrlR YP_006164224.1 2016416 R 595495 CDS YP_006164225.1 386700388 12762334 complement(2017256..2017615) 1 NC_017660.1 COG4578 Glucitol operon activator; DNA-binding transcriptional activator GutM 2017615 gutM 12762334 gutM Escherichia coli KO11FL DNA-binding transcriptional activator GutM YP_006164225.1 2017256 R 595495 CDS YP_006164226.1 386700389 12762335 complement(2017720..2018499) 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); sorbitol-6-phosphate dehydrogenase 2018499 srlD 12762335 srlD Escherichia coli KO11FL sorbitol-6-phosphate dehydrogenase YP_006164226.1 2017720 R 595495 CDS YP_006164227.1 386700390 12762336 complement(2018503..2018874) 1 NC_017660.1 COG3731 Phosphotransferase system sorbitol-specific component IIA; PTS system glucitol/sorbitol-specific transporter subunit IIA 2018874 srlB 12762336 srlB Escherichia coli KO11FL PTS system glucitol/sorbitol-specific transporter subunit IIA YP_006164227.1 2018503 R 595495 CDS YP_006164228.1 386700391 12762337 complement(2018885..2019844) 1 NC_017660.1 COG3732 Phosphotransferase system sorbitol-specific component IIBC; PTS system glucitol/sorbitol-specific transporter subunit IIB 2019844 srlE 12762337 srlE Escherichia coli KO11FL PTS system glucitol/sorbitol-specific transporter subunit IIB YP_006164228.1 2018885 R 595495 CDS YP_006164229.1 386700392 12762338 complement(2019841..2020404) 1 NC_017660.1 COG3730 Phosphotransferase system sorbitol-specific component IIC; Glucitol/sorbitol permease IIC component 2020404 srlA 12762338 srlA Escherichia coli KO11FL Glucitol/sorbitol permease IIC component YP_006164229.1 2019841 R 595495 CDS YP_006164230.1 386700393 12762339 2020660..2021745 1 NC_017660.1 COG2951 Membrane-bound lytic murein transglycosylase B; murein hydrolase B 2021745 mltB 12762339 mltB Escherichia coli KO11FL murein hydrolase B YP_006164230.1 2020660 D 595495 CDS YP_006164231.1 386700394 12762340 2021890..2022387 1 NC_017660.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced); ygaD; hypothetical protein 2022387 12762340 KO11_09520 Escherichia coli KO11FL hypothetical protein YP_006164231.1 2021890 D 595495 CDS YP_006164232.1 386700395 12762341 2022467..2023528 1 NC_017660.1 COG0468 RecA/RadA recombinase; recombinase A 2023528 recA 12762341 recA Escherichia coli KO11FL recombinase A YP_006164232.1 2022467 D 595495 CDS YP_006164233.1 386700396 12762342 2023771..2024271 1 NC_017660.1 COG2137 Uncharacterized protein conserved in bacteria; recombination regulator RecX 2024271 recX 12762342 recX Escherichia coli KO11FL recombination regulator RecX YP_006164233.1 2023771 D 595495 CDS YP_006164234.1 386700397 12762343 2024399..2027029 1 NC_017660.1 COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase 2027029 alaS 12762343 alaS Escherichia coli KO11FL alanyl-tRNA synthetase YP_006164234.1 2024399 D 595495 CDS YP_006164235.1 386700398 12762344 2027264..2027449 1 NC_017660.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 2027449 csrA 12762344 csrA Escherichia coli KO11FL carbon storage regulator YP_006164235.1 2027264 D 595495 CDS YP_006164236.1 386700399 12762350 2028907..2029473 1 NC_017660.1 COG0637 Predicted phosphatase/phosphohexomutase; fructose-1-P/6-phosphogluconate phosphatase 2029473 yqaB 12762350 yqaB Escherichia coli KO11FL fructose-1-P/6-phosphogluconate phosphatase YP_006164236.1 2028907 D 595495 CDS YP_006164237.1 386700400 12762351 2029470..2029898 1 NC_017660.1 COG1238 Predicted membrane protein; yqaA; hypothetical protein 2029898 12762351 KO11_09555 Escherichia coli KO11FL hypothetical protein YP_006164237.1 2029470 D 595495 CDS YP_006164238.1 386700401 12762352 2029971..2031527 1 NC_017660.1 COG2918 Gamma-glutamylcysteine synthetase; glutamate--cysteine ligase 2031527 gshA 12762352 gshA Escherichia coli KO11FL glutamate--cysteine ligase YP_006164238.1 2029971 D 595495 CDS YP_006164239.1 386700402 12762353 2031677..2032192 1 NC_017660.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase 2032192 luxS 12762353 luxS Escherichia coli KO11FL S-ribosylhomocysteinase YP_006164239.1 2031677 D 595495 CDS YP_006164240.1 386700403 12762354 complement(2032241..2033353) 1 NC_017660.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; hypothetical protein 2033353 12762354 KO11_09570 Escherichia coli KO11FL hypothetical protein YP_006164240.1 2032241 R 595495 CDS YP_006164241.1 386700404 12762355 complement(2033350..2034057) 1 NC_017660.1 hypothetical protein 2034057 12762355 KO11_09575 Escherichia coli KO11FL hypothetical protein YP_006164241.1 2033350 R 595495 CDS YP_006164242.1 386700405 12762356 complement(2034315..2035853) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; membrane translocase 2035853 emrB 12762356 emrB Escherichia coli KO11FL membrane translocase YP_006164242.1 2034315 R 595495 CDS YP_006164243.1 386700406 12762357 complement(2035870..2037042) 1 NC_017660.1 COG1566 Multidrug resistance efflux pump; multidrug efflux system protein EmrA 2037042 emrA 12762357 emrA Escherichia coli KO11FL multidrug efflux system protein EmrA YP_006164243.1 2035870 R 595495 CDS YP_006164244.1 386700407 12762358 complement(2037169..2037699) 1 NC_017660.1 COG1846 Transcriptional regulators; transcriptional repressor MprA 2037699 mprA 12762358 mprA Escherichia coli KO11FL transcriptional repressor MprA YP_006164244.1 2037169 R 595495 CDS YP_006164245.1 386700408 12762359 complement(2037790..2038125) 1 NC_017660.1 putative L-valine exporter 2038125 ygaH 12762359 ygaH Escherichia coli KO11FL putative L-valine exporter YP_006164245.1 2037790 R 595495 CDS YP_006164246.1 386700409 12762360 complement(2038115..2038852) 1 NC_017660.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); putative transporter 2038852 ygaZ 12762360 ygaZ Escherichia coli KO11FL putative transporter YP_006164246.1 2038115 R 595495 CDS YP_006164247.1 386700410 12762361 complement(2038976..2040160) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 2040160 ygaY 12762361 ygaY Escherichia coli KO11FL putative transporter YP_006164247.1 2038976 R 595495 CDS YP_006164248.1 386700411 12762362 complement(2040452..2041444) 1 NC_017660.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; glycine betaine transporter periplasmic subunit 2041444 proX 12762362 proX Escherichia coli KO11FL glycine betaine transporter periplasmic subunit YP_006164248.1 2040452 R 595495 CDS YP_006164249.1 386700412 12762363 complement(2041502..2042566) 1 NC_017660.1 COG4176 ABC-type proline/glycine betaine transport system, permease component; glycine betaine transporter membrane protein 2042566 proW 12762363 proW Escherichia coli KO11FL glycine betaine transporter membrane protein YP_006164249.1 2041502 R 595495 CDS YP_006164250.1 386700413 12762364 complement(2042559..2043761) 1 NC_017660.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component; glycine betaine transporter ATP-binding subunit 2043761 proV 12762364 proV Escherichia coli KO11FL glycine betaine transporter ATP-binding subunit YP_006164250.1 2042559 R 595495 CDS YP_006164251.1 386700414 12762365 complement(2044116..2045075) 1 NC_017660.1 COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 2045075 nrdF 12762365 nrdF Escherichia coli KO11FL ribonucleotide-diphosphate reductase subunit beta YP_006164251.1 2044116 R 595495 CDS YP_006164252.1 386700415 12762366 complement(2045085..2047190) 1 NC_017660.1 COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha 2047190 nrdE 12762366 nrdE Escherichia coli KO11FL ribonucleotide-diphosphate reductase subunit alpha YP_006164252.1 2045085 R 595495 CDS YP_006164253.1 386700416 12762367 complement(2047202..2047612) 1 NC_017660.1 COG1780 Protein involved in ribonucleotide reduction; ribonucleotide reductase stimulatory protein 2047612 nrdI 12762367 nrdI Escherichia coli KO11FL ribonucleotide reductase stimulatory protein YP_006164253.1 2047202 R 595495 CDS YP_006164254.1 386700417 12762368 complement(2047609..2047854) 1 NC_017660.1 COG0695 Glutaredoxin and related proteins; glutaredoxin-like protein 2047854 nrdH 12762368 nrdH Escherichia coli KO11FL glutaredoxin-like protein YP_006164254.1 2047609 R 595495 CDS YP_006164255.1 386700418 12762369 complement(2048102..2048431) 1 NC_017660.1 COG4575 Uncharacterized conserved protein; ygaM; hypothetical protein 2048431 12762369 KO11_09645 Escherichia coli KO11FL hypothetical protein YP_006164255.1 2048102 R 595495 CDS YP_006164256.1 386700419 12762370 2048583..2048927 1 NC_017660.1 ygaC; hypothetical protein 2048927 12762370 KO11_09650 Escherichia coli KO11FL hypothetical protein YP_006164256.1 2048583 D 595495 CDS YP_006164257.1 386700420 12762371 complement(2048964..2049413) 1 NC_017660.1 ygaW; hypothetical protein 2049413 12762371 KO11_09655 Escherichia coli KO11FL hypothetical protein YP_006164257.1 2048964 R 595495 CDS YP_006164258.1 386700421 12762372 2050081..2050485 1 NC_017660.1 COG2916 DNA-binding protein H-NS; DNA binding protein 2050485 stpA 12762372 stpA Escherichia coli KO11FL DNA binding protein YP_006164258.1 2050081 D 595495 CDS YP_006164259.1 386700422 12762373 complement(2050532..2051056) 1 NC_017660.1 COG0607 Rhodanese-related sulfurtransferase; putative inner membrane protein with hydrolase activity 2051056 ygaP 12762373 ygaP Escherichia coli KO11FL putative inner membrane protein with hydrolase activity YP_006164259.1 2050532 R 595495 CDS YP_006164260.1 386700423 12762374 complement(2051066..2051365) 1 NC_017660.1 COG0640 Predicted transcriptional regulators; putative DNA-binding transcriptional regulator 2051365 ygaV 12762374 ygaV Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006164260.1 2051066 R 595495 CDS YP_006164261.1 386700424 12762375 2051548..2051706 1 NC_017660.1 COG0401 Uncharacterized homolog of Blt101; yqaE; hypothetical protein 2051706 12762375 KO11_09675 Escherichia coli KO11FL hypothetical protein YP_006164261.1 2051548 D 595495 CDS YP_006164262.1 386700425 12762376 2051790..2052239 1 NC_017660.1 COG1652 Uncharacterized protein containing LysM domain; LysM domain/BON superfamily protein 2052239 ygaU 12762376 ygaU Escherichia coli KO11FL LysM domain/BON superfamily protein YP_006164262.1 2051790 D 595495 CDS YP_006164263.1 386700426 12762377 complement(2052240..2052902) 1 NC_017660.1 COG1802 Transcriptional regulators; DNA-binding transcriptional regulator CsiR 2052902 csiR 12762377 csiR Escherichia coli KO11FL DNA-binding transcriptional regulator CsiR YP_006164263.1 2052240 R 595495 CDS YP_006164264.1 386700427 12762378 complement(2052923..2054323) 1 NC_017660.1 COG1113 Gamma-aminobutyrate permease and related permeases; gamma-aminobutyrate transporter 2054323 gabP 12762378 gabP Escherichia coli KO11FL gamma-aminobutyrate transporter YP_006164264.1 2052923 R 595495 CDS YP_006164265.1 386700428 12762379 complement(2054560..2055840) 1 NC_017660.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases; 4-aminobutyrate aminotransferase 2055840 gabT 12762379 gabT Escherichia coli KO11FL 4-aminobutyrate aminotransferase YP_006164265.1 2054560 R 595495 CDS YP_006164266.1 386700429 12762380 complement(2055854..2057302) 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; succinate-semialdehyde dehydrogenase I 2057302 gabD 12762380 gabD Escherichia coli KO11FL succinate-semialdehyde dehydrogenase I YP_006164266.1 2055854 R 595495 CDS YP_006164267.1 386700430 12762381 complement(2057325..2058593) 1 NC_017660.1 COG0579 Predicted dehydrogenase; hydroxyglutarate oxidase 2058593 ygaF 12762381 ygaF Escherichia coli KO11FL hydroxyglutarate oxidase YP_006164267.1 2057325 R 595495 CDS YP_006164268.1 386700431 12762382 complement(2058613..2059590) 1 NC_017660.1 carbon starvation induced protein 2059590 csiD 12762382 csiD Escherichia coli KO11FL carbon starvation induced protein YP_006164268.1 2058613 R 595495 CDS YP_006164269.1 386700432 12762383 complement(2059926..2060933) 1 NC_017660.1 putative alpha amylase family enzyme 2060933 ygaQ 12762383 ygaQ Escherichia coli KO11FL putative alpha amylase family enzyme YP_006164269.1 2059926 R 595495 CDS YP_006164270.1 386700433 12762384 2061099..2061398 1 NC_017660.1 COG2963 Transposase and inactivated derivatives; transposase for IS3 2061398 insE2 12762384 insE2 Escherichia coli KO11FL transposase for IS3 YP_006164270.1 2061099 D 595495 CDS YP_006164271.1 386700434 12762385 2061395..2062261 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; transposase 2062261 insF2 12762385 insF2 Escherichia coli KO11FL transposase YP_006164271.1 2061395 D 595495 CDS YP_006164272.1 386700435 12762386 2062413..2064131 1 NC_017660.1 COG0642 Signal transduction histidine kinase; histidin kinase-like protein 2064131 12762386 KO11_09730 Escherichia coli KO11FL histidin kinase-like protein YP_006164272.1 2062413 D 595495 CDS YP_006164273.1 386700436 12762387 2064133..2065881 1 NC_017660.1 COG0749 DNA polymerase I - 3-5 exonuclease and polymerase domains; hypothetical protein 2065881 12762387 KO11_09735 Escherichia coli KO11FL hypothetical protein YP_006164273.1 2064133 D 595495 CDS YP_006164274.1 386700437 12762388 complement(2065953..2066369) 1 NC_017660.1 hypothetical protein 2066369 12762388 KO11_09740 Escherichia coli KO11FL hypothetical protein YP_006164274.1 2065953 R 595495 CDS YP_006164275.1 386700438 12762389 complement(2066408..2067637) 1 NC_017660.1 COG0582 Integrase; putative integrase 2067637 12762389 KO11_09745 Escherichia coli KO11FL putative integrase YP_006164275.1 2066408 R 595495 CDS YP_006164276.1 386700439 12762390 complement(2068380..2068862) 1 NC_017660.1 COG0691 tmRNA-binding protein; SsrA-binding protein 2068862 smpB 12762390 smpB Escherichia coli KO11FL SsrA-binding protein YP_006164276.1 2068380 R 595495 CDS YP_006164277.1 386700440 12762391 2068994..2069470 1 NC_017660.1 COG2867 Oligoketide cyclase/lipid transport protein; 50S ribosomal subunit-binding toxin 2069470 ratA 12762391 ratA Escherichia coli KO11FL 50S ribosomal subunit-binding toxin YP_006164277.1 2068994 D 595495 CDS YP_006164278.1 386700441 12762392 2069460..2069750 1 NC_017660.1 COG2914 Uncharacterized protein conserved in bacteria; ratB; hypothetical protein 2069750 12762392 KO11_09760 Escherichia coli KO11FL hypothetical protein YP_006164278.1 2069460 D 595495 CDS YP_006164279.1 386700442 12762393 complement(2069812..2070153) 1 NC_017660.1 COG2913 Small protein A (tmRNA-binding); outer membrane biogenesis protein BamE 2070153 bamE 12762393 bamE Escherichia coli KO11FL outer membrane biogenesis protein BamE YP_006164279.1 2069812 R 595495 CDS YP_006164280.1 386700443 12762394 complement(2070302..2071963) 1 NC_017660.1 COG0497 ATPase involved in DNA repair; recombination and repair protein 2071963 recN 12762394 recN Escherichia coli KO11FL recombination and repair protein YP_006164280.1 2070302 R 595495 CDS YP_006164281.1 386700444 12762395 complement(2072049..2072927) 1 NC_017660.1 COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase 2072927 nadK 12762395 nadK Escherichia coli KO11FL inorganic polyphosphate/ATP-NAD kinase YP_006164281.1 2072049 R 595495 CDS YP_006164282.1 386700445 12762396 2073050..2073643 1 NC_017660.1 COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein HSP70 cofactor 2073643 grpE 12762396 grpE Escherichia coli KO11FL heat shock protein HSP70 cofactor YP_006164282.1 2073050 D 595495 CDS YP_006164283.1 386700446 12762397 complement(2073698..2074894) 1 NC_017660.1 COG4536 Putative Mg2+ and Co2+ transporter CorB; yfjD; hypothetical protein 2074894 12762397 KO11_09785 Escherichia coli KO11FL hypothetical protein YP_006164283.1 2073698 R 595495 CDS YP_006164284.1 386700447 12762398 complement(2075005..2075871) 1 NC_017660.1 COG4137 ABC-type uncharacterized transport system, permease component; ypjD; hypothetical protein 2075871 12762398 KO11_09790 Escherichia coli KO11FL hypothetical protein YP_006164284.1 2075005 R 595495 CDS YP_006164285.1 386700448 12762399 2075963..2077324 1 NC_017660.1 COG0541 Signal recognition particle GTPase; signal recognition particle protein 2077324 ffh 12762399 ffh Escherichia coli KO11FL signal recognition particle protein YP_006164285.1 2075963 D 595495 CDS YP_006164286.1 386700449 12762400 2077573..2077821 1 NC_017660.1 COG0228 Ribosomal protein S16; 30S ribosomal protein S16 2077821 rpsP 12762400 rpsP Escherichia coli KO11FL 30S ribosomal protein S16 YP_006164286.1 2077573 D 595495 CDS YP_006164287.1 386700450 12762401 2077840..2078388 1 NC_017660.1 COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM 2078388 rimM 12762401 rimM Escherichia coli KO11FL 16S rRNA-processing protein RimM YP_006164287.1 2077840 D 595495 CDS YP_006164288.1 386700451 12762402 2078419..2079186 1 NC_017660.1 COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 2079186 trmD 12762402 trmD Escherichia coli KO11FL tRNA (guanine-N(1)-)-methyltransferase YP_006164288.1 2078419 D 595495 CDS YP_006164289.1 386700452 12762403 2079228..2079575 1 NC_017660.1 COG0335 Ribosomal protein L19; 50S ribosomal protein L19 2079575 rplS 12762403 rplS Escherichia coli KO11FL 50S ribosomal protein L19 YP_006164289.1 2079228 D 595495 CDS YP_006164290.1 386700453 12762404 complement(2079652..2080134) 1 NC_017660.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; putative outer membrane lipoprotein 2080134 yfiB 12762404 yfiB Escherichia coli KO11FL putative outer membrane lipoprotein YP_006164290.1 2079652 R 595495 CDS YP_006164291.1 386700454 12762405 complement(2080150..2081373) 1 NC_017660.1 COG2199 FOG: GGDEF domain; putative inner membrane diguanylate cyclase 2081373 yfiN 12762405 yfiN Escherichia coli KO11FL putative inner membrane diguanylate cyclase YP_006164291.1 2080150 R 595495 CDS YP_006164292.1 386700455 12762406 complement(2081366..2081884) 1 NC_017660.1 yfiR; hypothetical protein 2081884 12762406 KO11_09830 Escherichia coli KO11FL hypothetical protein YP_006164292.1 2081366 R 595495 CDS YP_006164293.1 386700456 12762407 complement(2082034..2082399) 1 NC_017660.1 COG0178 Excinuclease ATPase subunit; lipoprotein 2082399 yfiL 12762407 yfiL Escherichia coli KO11FL lipoprotein YP_006164293.1 2082034 R 595495 CDS YP_006164294.1 386700457 12762408 2082609..2083679 1 NC_017660.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 2083679 aroF 12762408 aroF Escherichia coli KO11FL phospho-2-dehydro-3-deoxyheptonate aldolase YP_006164294.1 2082609 D 595495 CDS YP_006164295.1 386700458 12762409 2083690..2084811 1 NC_017660.1 COG1605 Chorismate mutase; bifunctional chorismate mutase/prephenate dehydrogenase 2084811 tyrA 12762409 tyrA Escherichia coli KO11FL bifunctional chorismate mutase/prephenate dehydrogenase YP_006164295.1 2083690 D 595495 CDS YP_006164296.1 386700459 12762410 complement(2084854..2086014) 1 NC_017660.1 COG1605 Chorismate mutase; bifunctional chorismate mutase/prephenate dehydratase 2086014 pheA 12762410 pheA Escherichia coli KO11FL bifunctional chorismate mutase/prephenate dehydratase YP_006164296.1 2084854 R 595495 CDS YP_006164298.1 386700461 12762412 complement(2086264..2086605) 1 NC_017660.1 COG1544 Ribosome-associated protein Y (PSrp-1); translation inhibitor protein RaiA 2086605 raiA 12762412 raiA Escherichia coli KO11FL translation inhibitor protein RaiA YP_006164298.1 2086264 R 595495 CDS YP_006164299.1 386700462 12762413 complement(2086876..2087613) 1 NC_017660.1 COG4105 DNA uptake lipoprotein; outer membrane biogenesis protein BamD 2087613 bamD 12762413 bamD Escherichia coli KO11FL outer membrane biogenesis protein BamD YP_006164299.1 2086876 R 595495 CDS YP_006164300.1 386700463 12762414 2087748..2088728 1 NC_017660.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA pseudouridine synthase D 2088728 rluD 12762414 rluD Escherichia coli KO11FL 23S rRNA pseudouridine synthase D YP_006164300.1 2087748 D 595495 CDS YP_006164301.1 386700464 12762415 2088725..2089456 1 NC_017660.1 COG1496 Uncharacterized conserved protein; yfiH; hypothetical protein 2089456 12762415 KO11_09870 Escherichia coli KO11FL hypothetical protein YP_006164301.1 2088725 D 595495 CDS YP_006164302.1 386700465 12762416 2089586..2092159 1 NC_017660.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; protein disaggregation chaperone 2092159 clpB 12762416 clpB Escherichia coli KO11FL protein disaggregation chaperone YP_006164302.1 2089586 D 595495 CDS YP_006164303.1 386700466 12762421 complement(2097782..2097892) 1 NC_017660.1 hypothetical protein 2097892 12762421 KO11_09880 Escherichia coli KO11FL hypothetical protein YP_006164303.1 2097782 R 595495 CDS YP_006164304.1 386700467 12762422 2098024..2099322 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate transporter 2099322 kgtP 12762422 kgtP Escherichia coli KO11FL alpha-ketoglutarate transporter YP_006164304.1 2098024 D 595495 CDS YP_006164305.1 386700468 12762423 complement(2099319..2099591) 1 NC_017660.1 COG5544 Predicted periplasmic lipoprotein; lipoprotein 2099591 yfiM 12762423 yfiM Escherichia coli KO11FL lipoprotein YP_006164305.1 2099319 R 595495 CDS YP_006164306.1 386700469 12762424 complement(2099688..2101043) 1 NC_017660.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylserine synthase 2101043 pssA 12762424 pssA Escherichia coli KO11FL phosphatidylserine synthase YP_006164306.1 2099688 R 595495 CDS YP_006164307.1 386700470 12762425 complement(2101157..2103817) 1 NC_017660.1 COG1042 Acyl-CoA synthetase (NDP forming); fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit 2103817 yfiQ 12762425 yfiQ Escherichia coli KO11FL fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit YP_006164307.1 2101157 R 595495 CDS YP_006164308.1 386700471 12762426 complement(2103849..2104547) 1 NC_017660.1 COG3148 Uncharacterized conserved protein; DTW domain-containing protein yfiP 2104547 yfiP 12762426 yfiP Escherichia coli KO11FL DTW domain-containing protein yfiP YP_006164308.1 2103849 R 595495 CDS YP_006164309.1 386700472 12762427 complement(2104616..2105035) 1 NC_017660.1 COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 2 2105035 trxC 12762427 trxC Escherichia coli KO11FL thioredoxin 2 YP_006164309.1 2104616 R 595495 CDS YP_006164310.1 386700473 12762428 2105242..2106279 1 NC_017660.1 COG0566 rRNA methylases; putative methyltransferase 2106279 yfiF 12762428 yfiF Escherichia coli KO11FL putative methyltransferase YP_006164310.1 2105242 D 595495 CDS YP_006164311.1 386700474 12762429 complement(2106327..2107016) 1 NC_017660.1 COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase 2107016 ung 12762429 ung Escherichia coli KO11FL uracil-DNA glycosylase YP_006164311.1 2106327 R 595495 CDS YP_006164312.1 386700475 12762430 2107321..2107704 1 NC_017660.1 COG3445 Acid-induced glycyl radical enzyme; autonomous glycyl radical cofactor; stress-induced alternate pyruvate formate-lyase subunit 2107704 yfiD 12762430 yfiD Escherichia coli KO11FL stress-induced alternate pyruvate formate-lyase subunit YP_006164312.1 2107321 D 595495 CDS YP_006164313.1 386700476 12762431 complement(2107759..2108346) 1 NC_017660.1 COG1280 Putative threonine efflux protein; cysteine/O-acetylserine exporter 2108346 eamB 12762431 eamB Escherichia coli KO11FL cysteine/O-acetylserine exporter YP_006164313.1 2107759 R 595495 CDS YP_006164314.1 386700477 12762432 2108404..2109330 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 2109330 yfiE 12762432 yfiE Escherichia coli KO11FL LysR family transcriptional regulator YP_006164314.1 2108404 D 595495 CDS YP_006164315.1 386700478 12762433 complement(2109363..2110697) 1 NC_017660.1 COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase SrmB 2110697 srmB 12762433 srmB Escherichia coli KO11FL ATP-dependent RNA helicase SrmB YP_006164315.1 2109363 R 595495 CDS YP_006164316.1 386700479 12762434 2110829..2111566 1 NC_017660.1 COG4123 Predicted O-methyltransferase; putative S-adenosyl-L-methionine-dependent methyltransferase 2111566 yfiC 12762434 yfiC Escherichia coli KO11FL putative S-adenosyl-L-methionine-dependent methyltransferase YP_006164316.1 2110829 D 595495 CDS YP_006164317.1 386700480 12762435 complement(2111551..2113173) 1 NC_017660.1 COG0029 Aspartate oxidase; L-aspartate oxidase 2113173 nadB 12762435 nadB Escherichia coli KO11FL L-aspartate oxidase YP_006164317.1 2111551 R 595495 CDS YP_006164318.1 386700481 12762436 2113581..2114156 1 NC_017660.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; RNA polymerase sigma factor RpoE 2114156 rpoE 12762436 rpoE Escherichia coli KO11FL RNA polymerase sigma factor RpoE YP_006164318.1 2113581 D 595495 CDS YP_006164319.1 386700482 12762437 2114189..2114839 1 NC_017660.1 COG3073 Negative regulator of sigma E activity; anti-RNA polymerase sigma factor SigE 2114839 rseA 12762437 rseA Escherichia coli KO11FL anti-RNA polymerase sigma factor SigE YP_006164319.1 2114189 D 595495 CDS YP_006164320.1 386700483 12762438 2114839..2115795 1 NC_017660.1 COG3026 Negative regulator of sigma E activity; anti-sigma E factor 2115795 rseB 12762438 rseB Escherichia coli KO11FL anti-sigma E factor YP_006164320.1 2114839 D 595495 CDS YP_006164321.1 386700484 12762439 2115792..2116271 1 NC_017660.1 COG3086 Positive regulator of sigma E activity; SoxR reducing system protein RseC 2116271 rseC 12762439 rseC Escherichia coli KO11FL SoxR reducing system protein RseC YP_006164321.1 2115792 D 595495 CDS YP_006164322.1 386700485 12762440 2116469..2118268 1 NC_017660.1 COG0481 Membrane GTPase LepA; GTP-binding protein LepA 2118268 lepA 12762440 lepA Escherichia coli KO11FL GTP-binding protein LepA YP_006164322.1 2116469 D 595495 CDS YP_006164323.1 386700486 12762441 2118284..2119258 1 NC_017660.1 COG0681 Signal peptidase I; signal peptidase I 2119258 lepB 12762441 lepB Escherichia coli KO11FL signal peptidase I YP_006164323.1 2118284 D 595495 CDS YP_006164324.1 386700487 12762442 2119530..2120210 1 NC_017660.1 COG0571 dsRNA-specific ribonuclease; ribonuclease III 2120210 rnc 12762442 rnc Escherichia coli KO11FL ribonuclease III YP_006164324.1 2119530 D 595495 CDS YP_006164325.1 386700488 12762443 2120207..2121112 1 NC_017660.1 COG1159 GTPase; GTPase Era 2121112 era 12762443 era Escherichia coli KO11FL GTPase Era YP_006164325.1 2120207 D 595495 CDS YP_006164326.1 386700489 12762444 2121124..2121852 1 NC_017660.1 COG1381 Recombinational DNA repair protein (RecF pathway); DNA repair protein RecO 2121852 recO 12762444 recO Escherichia coli KO11FL DNA repair protein RecO YP_006164326.1 2121124 D 595495 CDS YP_006164327.1 386700490 12762445 2121864..2122595 1 NC_017660.1 COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 2122595 pdxJ 12762445 pdxJ Escherichia coli KO11FL pyridoxine 5'-phosphate synthase YP_006164327.1 2121864 D 595495 CDS YP_006164328.1 386700491 12762446 2122595..2122975 1 NC_017660.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase 2122975 acpS 12762446 acpS Escherichia coli KO11FL 4'-phosphopantetheinyl transferase YP_006164328.1 2122595 D 595495 CDS YP_006164329.1 386700492 12762447 complement(2123670..2123930) 1 NC_017660.1 COG1145 Ferredoxin; putative 4Fe-4S cluster-containing protein 2123930 yfhL 12762447 yfhL Escherichia coli KO11FL putative 4Fe-4S cluster-containing protein YP_006164329.1 2123670 R 595495 CDS YP_006164330.1 386700493 12762448 complement(2123986..2124834) 1 NC_017660.1 COG1737 Transcriptional regulators; putative DNA-binding transcriptional regulator 2124834 yfhH 12762448 yfhH Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006164330.1 2123986 R 595495 CDS YP_006164331.1 386700494 12762449 2125043..2125678 1 NC_017660.1 COG0560 Phosphoserine phosphatase; yfhB; hypothetical protein 2125678 12762449 KO11_10020 Escherichia coli KO11FL hypothetical protein YP_006164331.1 2125043 D 595495 CDS YP_006164332.1 386700495 12762450 2125736..2126239 1 NC_017660.1 COG0590 Cytosine/adenosine deaminases; tRNA-specific adenosine deaminase 2126239 tadA 12762450 tadA Escherichia coli KO11FL tRNA-specific adenosine deaminase YP_006164332.1 2125736 D 595495 CDS YP_006164333.1 386700496 12762451 complement(2126236..2127792) 1 NC_017660.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; membrane-bound lytic transglycosylase F 2127792 mltF 12762451 mltF Escherichia coli KO11FL membrane-bound lytic transglycosylase F YP_006164333.1 2126236 R 595495 CDS YP_006164334.1 386700497 12762452 2128053..2131937 1 NC_017660.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; phosphoribosylformylglycinamidine synthase 2131937 purL 12762452 purL Escherichia coli KO11FL phosphoribosylformylglycinamidine synthase YP_006164334.1 2128053 D 595495 CDS YP_006164335.1 386700498 12762453 2132558..2133940 1 NC_017660.1 COG0642 Signal transduction histidine kinase; putative 2-component sensor protein 2133940 glrK 12762453 glrK Escherichia coli KO11FL putative 2-component sensor protein YP_006164335.1 2132558 D 595495 CDS YP_006164336.1 386700499 12762454 2134105..2134818 1 NC_017660.1 yfhG; hypothetical protein 2134818 12762454 KO11_10045 Escherichia coli KO11FL hypothetical protein YP_006164336.1 2134105 D 595495 CDS YP_006164337.1 386700500 12762455 2134808..2136142 1 NC_017660.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; response regulator GlrR 2136142 glrR 12762455 glrR Escherichia coli KO11FL response regulator GlrR YP_006164337.1 2134808 D 595495 CDS YP_006164338.1 386700501 12762456 2136203..2136541 1 NC_017660.1 COG0347 Nitrogen regulatory protein PII; nitrogen regulatory protein P-II 1 2136541 glnB 12762456 glnB Escherichia coli KO11FL nitrogen regulatory protein P-II 1 YP_006164338.1 2136203 D 595495 CDS YP_006164339.1 386700502 12762457 complement(2136586..2137776) 1 NC_017660.1 COG1017 Hemoglobin-like flavoprotein; bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 2137776 hmp 12762457 hmp Escherichia coli KO11FL bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 YP_006164339.1 2136586 R 595495 CDS YP_006164340.1 386700503 12762458 2138104..2139357 1 NC_017660.1 COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 2139357 glyA 12762458 glyA Escherichia coli KO11FL serine hydroxymethyltransferase YP_006164340.1 2138104 D 595495 CDS YP_006164341.1 386700504 12762459 complement(2139421..2140614) 1 NC_017660.1 COG1940 Transcriptional regulator/sugar kinase; putative DNA-binding transcriptional regulator 2140614 yphH 12762459 yphH Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006164341.1 2139421 R 595495 CDS YP_006164342.1 386700505 12762460 2140732..2144013 1 NC_017660.1 COG0457 FOG: TPR repeat; yphG; hypothetical protein 2144013 12762460 KO11_10075 Escherichia coli KO11FL hypothetical protein YP_006164342.1 2140732 D 595495 CDS YP_006164343.1 386700506 12762461 2144110..2145093 1 NC_017660.1 COG1879 ABC-type sugar transport system, periplasmic component; putative sugar transporter subunit: periplasmic-binding component of ABC superfamily protein 2145093 yphF 12762461 yphF Escherichia coli KO11FL putative sugar transporter subunit: periplasmic-binding component of ABC superfamily protein YP_006164343.1 2144110 D 595495 CDS YP_006164344.1 386700507 12762462 2145116..2146627 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; fused putative sugar transporter subunits of ABC superfamily: ATP-binding components 2146627 yphE 12762462 yphE Escherichia coli KO11FL fused putative sugar transporter subunits of ABC superfamily: ATP-binding components YP_006164344.1 2145116 D 595495 CDS YP_006164345.1 386700508 12762463 2146652..2147650 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; putative transport system permease 2147650 yphD 12762463 yphD Escherichia coli KO11FL putative transport system permease YP_006164345.1 2146652 D 595495 CDS YP_006164346.1 386700509 12762464 2147683..2148777 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative oxidoreductase 2148777 yphC 12762464 yphC Escherichia coli KO11FL putative oxidoreductase YP_006164346.1 2147683 D 595495 CDS YP_006164347.1 386700510 12762465 2148789..2149661 1 NC_017660.1 COG2017 Galactose mutarotase and related enzymes; yphB; hypothetical protein 2149661 12762465 KO11_10100 Escherichia coli KO11FL hypothetical protein YP_006164347.1 2148789 D 595495 CDS YP_006164348.1 386700511 12762466 complement(2149709..2150131) 1 NC_017660.1 COG2259 Predicted membrane protein; yphA; hypothetical protein 2150131 12762466 KO11_10105 Escherichia coli KO11FL hypothetical protein YP_006164348.1 2149709 R 595495 CDS YP_006164349.1 386700512 12762467 complement(2150914..2151432) 1 NC_017660.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; truncated by frameshift; phenylpropionate dioxygenase ferredoxin reductase subunit 2151432 hcaD 12762467 hcaD Escherichia coli KO11FL phenylpropionate dioxygenase ferredoxin reductase subunit YP_006164349.1 2150914 R 595495 CDS YP_006164350.1 386700513 12762468 complement(2151442..2152254) 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2152254 hcaB 12762468 hcaB Escherichia coli KO11FL 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase YP_006164350.1 2151442 R 595495 CDS YP_006164351.1 386700514 12762469 complement(2152251..2152571) 1 NC_017660.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; 3-phenylpropionate dioxygenase ferredoxin subunit 2152571 hcaC 12762469 hcaC Escherichia coli KO11FL 3-phenylpropionate dioxygenase ferredoxin subunit YP_006164351.1 2152251 R 595495 CDS YP_006164352.1 386700515 12762470 complement(2152571..2153089) 1 NC_017660.1 COG5517 Small subunit of phenylpropionate dioxygenase; 3-phenylpropionate dioxygenase subunit beta 2153089 hcaF 12762470 hcaF Escherichia coli KO11FL 3-phenylpropionate dioxygenase subunit beta YP_006164352.1 2152571 R 595495 CDS YP_006164353.1 386700516 12762471 complement(2153086..2154447) 1 NC_017660.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit; 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha 2154447 hcaE 12762471 hcaE Escherichia coli KO11FL 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha YP_006164353.1 2153086 R 595495 CDS YP_006164354.1 386700517 12762472 2154583..2155473 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional regulator HcaR 2155473 hcaR 12762472 hcaR Escherichia coli KO11FL DNA-binding transcriptional regulator HcaR YP_006164354.1 2154583 D 595495 CDS YP_006164355.1 386700518 12762473 2155633..2156772 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative 3-phenylpropionic acid transporter 2156772 hcaT 12762473 hcaT Escherichia coli KO11FL putative 3-phenylpropionic acid transporter YP_006164355.1 2155633 D 595495 CDS YP_006164356.1 386700519 12762474 complement(2156764..2158044) 1 NC_017660.1 COG3711 Transcriptional antiterminator; stationary phase inducible protein CsiE 2158044 csiE 12762474 csiE Escherichia coli KO11FL stationary phase inducible protein CsiE YP_006164356.1 2156764 R 595495 CDS YP_006164357.1 386700520 12762475 complement(2158235..2159089) 1 NC_017660.1 COG1073 Hydrolases of the alpha/beta superfamily; putative peptidase 2159089 yfhR 12762475 yfhR Escherichia coli KO11FL putative peptidase YP_006164357.1 2158235 R 595495 CDS YP_006164358.1 386700521 12762476 complement(2159234..2160037) 1 NC_017660.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; inositol monophosphatase 2160037 suhB 12762476 suhB Escherichia coli KO11FL inositol monophosphatase YP_006164358.1 2159234 R 595495 CDS YP_006164359.1 386700522 12762477 2160156..2160896 1 NC_017660.1 COG0565 rRNA methylase; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ 2160896 trmJ 12762477 trmJ Escherichia coli KO11FL tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ YP_006164359.1 2160156 D 595495 CDS YP_006164360.1 386700523 12762478 2161166..2161654 1 NC_017660.1 COG1959 Predicted transcriptional regulator; DNA-binding transcriptional regulator IscR 2161654 iscR 12762478 iscR Escherichia coli KO11FL DNA-binding transcriptional regulator IscR YP_006164360.1 2161166 D 595495 CDS YP_006164361.1 386700524 12762479 2161766..2162980 1 NC_017660.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 2162980 iscS 12762479 iscS Escherichia coli KO11FL cysteine desulfurase YP_006164361.1 2161766 D 595495 CDS YP_006164362.1 386700525 12762480 2163008..2163394 1 NC_017660.1 COG0822 NifU homolog involved in Fe-S cluster formation; scaffold protein 2163394 iscU 12762480 iscU Escherichia coli KO11FL scaffold protein YP_006164362.1 2163008 D 595495 CDS YP_006164363.1 386700526 12762481 2163411..2163734 1 NC_017660.1 COG0316 Uncharacterized conserved protein; iron-sulfur cluster assembly protein 2163734 iscA 12762481 iscA Escherichia coli KO11FL iron-sulfur cluster assembly protein YP_006164363.1 2163411 D 595495 CDS YP_006164364.1 386700527 12762482 2163830..2164345 1 NC_017660.1 COG1076 DnaJ-domain-containing proteins 1; co-chaperone HscB 2164345 hscB 12762482 hscB Escherichia coli KO11FL co-chaperone HscB YP_006164364.1 2163830 D 595495 CDS YP_006164365.1 386700528 12762483 2164362..2166212 1 NC_017660.1 COG0443 Molecular chaperone; chaperone protein HscA 2166212 hscA 12762483 hscA Escherichia coli KO11FL chaperone protein HscA YP_006164365.1 2164362 D 595495 CDS YP_006164366.1 386700529 12762484 2166214..2166549 1 NC_017660.1 COG0633 Ferredoxin; 2Fe-2S ferredoxin 2166549 fdx 12762484 fdx Escherichia coli KO11FL 2Fe-2S ferredoxin YP_006164366.1 2166214 D 595495 CDS YP_006164367.1 386700530 12762485 2166561..2166761 1 NC_017660.1 COG2975 Uncharacterized protein conserved in bacteria; iscX; hypothetical protein 2166761 12762485 KO11_10200 Escherichia coli KO11FL hypothetical protein YP_006164367.1 2166561 D 595495 CDS YP_006164368.1 386700531 12762486 2166939..2168222 1 NC_017660.1 COG0260 Leucyl aminopeptidase; aminopeptidase B 2168222 pepB 12762486 pepB Escherichia coli KO11FL aminopeptidase B YP_006164368.1 2166939 D 595495 CDS YP_006164369.1 386700532 12762487 2168364..2169140 1 NC_017660.1 enhanced serine sensitivity protein SseB 2169140 sseB 12762487 sseB Escherichia coli KO11FL enhanced serine sensitivity protein SseB YP_006164369.1 2168364 D 595495 CDS YP_006164370.1 386700533 12762488 complement(2169633..2170478) 1 NC_017660.1 COG2897 Rhodanese-related sulfurtransferase; 3-mercaptopyruvate sulfurtransferase 2170478 sseA 12762488 sseA Escherichia coli KO11FL 3-mercaptopyruvate sulfurtransferase YP_006164370.1 2169633 R 595495 CDS YP_006164371.1 386700534 12762489 2170685..2175646 1 NC_017660.1 COG2373 Large extracellular alpha-helical protein; yfhM; hypothetical protein 2175646 12762489 KO11_10220 Escherichia coli KO11FL hypothetical protein YP_006164371.1 2170685 D 595495 CDS YP_006164372.1 386700535 12762490 2175647..2177959 1 NC_017660.1 COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; penicillin-binding protein 1C 2177959 pbpC 12762490 pbpC Escherichia coli KO11FL penicillin-binding protein 1C YP_006164372.1 2175647 D 595495 CDS YP_006164373.1 386700536 12762491 2178108..2178539 1 NC_017660.1 COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase 2178539 ndk 12762491 ndk Escherichia coli KO11FL mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase YP_006164373.1 2178108 D 595495 CDS YP_006164374.1 386700537 12762492 2178689..2179843 1 NC_017660.1 COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N 2179843 rlmN 12762492 rlmN Escherichia coli KO11FL ribosomal RNA large subunit methyltransferase N YP_006164374.1 2178689 D 595495 CDS YP_006164375.1 386700538 12762493 2180128..2181141 1 NC_017660.1 COG1426 Uncharacterized protein conserved in bacteria; cytoskeletal protein RodZ 2181141 rodZ 12762493 rodZ Escherichia coli KO11FL cytoskeletal protein RodZ YP_006164375.1 2180128 D 595495 CDS YP_006164376.1 386700539 12762494 2181168..2182286 1 NC_017660.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2182286 ispG 12762494 ispG Escherichia coli KO11FL 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_006164376.1 2181168 D 595495 CDS YP_006164377.1 386700540 12762495 2182397..2183671 1 NC_017660.1 COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase 2183671 hisS 12762495 hisS Escherichia coli KO11FL histidyl-tRNA synthetase YP_006164377.1 2182397 D 595495 CDS YP_006164378.1 386700541 12762496 2183689..2184309 1 NC_017660.1 COG2976 Uncharacterized protein conserved in bacteria; yfgM; hypothetical protein 2184309 12762496 KO11_10255 Escherichia coli KO11FL hypothetical protein YP_006164378.1 2183689 D 595495 CDS YP_006164379.1 386700542 12762497 2184320..2185498 1 NC_017660.1 COG1520 FOG: WD40-like repeat; outer membrane biogenesis protein BamB 2185498 bamB 12762497 bamB Escherichia coli KO11FL outer membrane biogenesis protein BamB YP_006164379.1 2184320 D 595495 CDS YP_006164380.1 386700543 12762498 2185616..2187088 1 NC_017660.1 COG1160 Predicted GTPases; GTP-binding protein Der 2187088 der 12762498 der Escherichia coli KO11FL GTP-binding protein Der YP_006164380.1 2185616 D 595495 CDS YP_006164381.1 386700544 12762499 2187157..2187372 1 NC_017660.1 COG1933 Archaeal DNA polymerase II, large subunit; yfgJ; hypothetical protein 2187372 12762499 KO11_10270 Escherichia coli KO11FL hypothetical protein YP_006164381.1 2187157 D 595495 CDS YP_006164382.1 386700545 12762500 complement(2187369..2188739) 1 NC_017660.1 COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 2188739 xseA 12762500 xseA Escherichia coli KO11FL exodeoxyribonuclease VII large subunit YP_006164382.1 2187369 R 595495 CDS YP_006164383.1 386700546 12762501 2188901..2190367 1 NC_017660.1 COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase 2190367 guaB 12762501 guaB Escherichia coli KO11FL inosine 5'-monophosphate dehydrogenase YP_006164383.1 2188901 D 595495 CDS YP_006164384.1 386700547 12762502 2190436..2192013 1 NC_017660.1 COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase 2192013 guaA 12762502 guaA Escherichia coli KO11FL GMP synthase YP_006164384.1 2190436 D 595495 CDS YP_006164385.1 386700548 12762503 complement(2192108..2192647) 1 NC_017660.1 yfgI; hypothetical protein 2192647 12762503 KO11_10290 Escherichia coli KO11FL hypothetical protein YP_006164385.1 2192108 R 595495 CDS YP_006164386.1 386700549 12762504 complement(2192663..2193178) 1 NC_017660.1 putative outer membrane lipoprotein 2193178 yfgH 12762504 yfgH Escherichia coli KO11FL putative outer membrane lipoprotein YP_006164386.1 2192663 R 595495 CDS YP_006164387.1 386700550 12762505 complement(2193492..2193683) 1 NC_017660.1 yfgG; hypothetical protein 2193683 12762505 KO11_10300 Escherichia coli KO11FL hypothetical protein YP_006164387.1 2193492 R 595495 CDS YP_006164388.1 386700551 12762506 2193701..2193853 1 NC_017660.1 hypothetical protein 2193853 12762506 KO11_10305 Escherichia coli KO11FL hypothetical protein YP_006164388.1 2193701 D 595495 CDS YP_006164389.1 386700552 12762507 2194035..2195921 1 NC_017660.1 COG2199 FOG: GGDEF domain; fragmented by IS10 insertion; putative inner membrane protein 2195921 yfgF_1 12762507 yfgF_1 Escherichia coli KO11FL putative inner membrane protein YP_006164389.1 2194035 D 595495 CDS YP_006164390.1 386700553 12762508 2196025..2197233 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 2197233 12762508 KO11_10315 Escherichia coli KO11FL IS10 transposase YP_006164390.1 2196025 D 595495 CDS YP_006164391.1 386700554 12762509 2197230..2197616 1 NC_017660.1 COG2200 FOG: EAL domain; putative cytochrome C-type biogenesis protein 2197616 yfgF_2 12762509 yfgF_2 Escherichia coli KO11FL putative cytochrome C-type biogenesis protein YP_006164391.1 2197230 D 595495 CDS YP_006164392.1 386700555 12762510 complement(2197655..2199196) 1 NC_017660.1 COG0248 Exopolyphosphatase; exopolyphosphatase 2199196 ppx 12762510 ppx Escherichia coli KO11FL exopolyphosphatase YP_006164392.1 2197655 R 595495 CDS YP_006164393.1 386700556 12762511 complement(2199201..2201267) 1 NC_017660.1 COG0855 Polyphosphate kinase; polyphosphate kinase 2201267 ppk 12762511 ppk Escherichia coli KO11FL polyphosphate kinase YP_006164393.1 2199201 R 595495 CDS YP_006164394.1 386700557 12762512 complement(2201438..2202076) 1 NC_017660.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; phosphoribosylglycinamide formyltransferase 2202076 purN 12762512 purN Escherichia coli KO11FL phosphoribosylglycinamide formyltransferase YP_006164394.1 2201438 R 595495 CDS YP_006164395.1 386700558 12762513 complement(2202076..2203113) 1 NC_017660.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; phosphoribosylaminoimidazole synthetase 2203113 purM 12762513 purM Escherichia coli KO11FL phosphoribosylaminoimidazole synthetase YP_006164395.1 2202076 R 595495 CDS YP_006164396.1 386700559 12762514 2203438..2204064 1 NC_017660.1 COG0035 Uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 2204064 upp 12762514 upp Escherichia coli KO11FL uracil phosphoribosyltransferase YP_006164396.1 2203438 D 595495 CDS YP_006164397.1 386700560 12762515 2204150..2205439 1 NC_017660.1 COG2233 Xanthine/uracil permeases; uracil transporter 2205439 uraA 12762515 uraA Escherichia coli KO11FL uracil transporter YP_006164397.1 2204150 D 595495 CDS YP_006164398.1 386700561 12762516 2205489..2206235 1 NC_017660.1 COG0593 ATPase involved in DNA replication initiation; DNA replication initiation factor 2206235 had 12762516 had Escherichia coli KO11FL DNA replication initiation factor YP_006164398.1 2205489 D 595495 CDS YP_006164399.1 386700562 12762517 complement(2206373..2206732) 1 NC_017660.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family; putative oxidoreductase 2206732 yfgD 12762517 yfgD Escherichia coli KO11FL putative oxidoreductase YP_006164399.1 2206373 R 595495 CDS YP_006164400.1 386700563 12762518 complement(2206753..2208216) 1 NC_017660.1 COG4783 Putative Zn-dependent protease, contains TPR repeats; Peptidase, M48 family protein 2208216 yfgC 12762518 yfgC Escherichia coli KO11FL Peptidase, M48 family protein YP_006164400.1 2206753 R 595495 CDS YP_006164401.1 386700564 12762519 2208429..2209490 1 NC_017660.1 COG0628 Predicted permease; putative permease perM 2209490 yfgO 12762519 yfgO Escherichia coli KO11FL putative permease perM YP_006164401.1 2208429 D 595495 CDS YP_006164402.1 386700565 12762520 complement(2209528..2210376) 1 NC_017660.1 COG2116 Formate/nitrite family of transporters; putative formate transporter 2210376 focB 12762520 focB Escherichia coli KO11FL putative formate transporter YP_006164402.1 2209528 R 595495 CDS YP_006164403.1 386700566 12762521 complement(2210398..2212410) 1 NC_017660.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; DNA-binding transcriptional activator HyfR 2212410 hyfR 12762521 hyfR Escherichia coli KO11FL DNA-binding transcriptional activator HyfR YP_006164403.1 2210398 R 595495 CDS YP_006164404.1 386700567 12762522 complement(2212440..2212853) 1 NC_017660.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; formate hydrogenlyase maturation protein 2212853 hyfJ 12762522 hyfJ Escherichia coli KO11FL formate hydrogenlyase maturation protein YP_006164404.1 2212440 R 595495 CDS YP_006164405.1 386700568 12762524 complement(2213600..2214139) 1 NC_017660.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); hydrogenase 4 subunit H 2214139 hyfH 12762524 hyfH Escherichia coli KO11FL hydrogenase 4 subunit H YP_006164405.1 2213600 R 595495 CDS YP_006164406.1 386700569 12762525 complement(2214149..2215864) 1 NC_017660.1 COG3262 Ni,Fe-hydrogenase III component G; hydrogenase 4 membrane subunit 2215864 hyfG 12762525 hyfG Escherichia coli KO11FL hydrogenase 4 membrane subunit YP_006164406.1 2214149 R 595495 CDS YP_006164407.1 386700570 12762526 complement(2215854..2217434) 1 NC_017660.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; hydrogenase 4 subunit F 2217434 hyfF 12762526 hyfF Escherichia coli KO11FL hydrogenase 4 subunit F YP_006164407.1 2215854 R 595495 CDS YP_006164408.1 386700571 12762527 complement(2217439..2218089) 1 NC_017660.1 COG4237 Hydrogenase 4 membrane component (E); hydrogenase 4 membrane subunit 2218089 hyfE 12762527 hyfE Escherichia coli KO11FL hydrogenase 4 membrane subunit YP_006164408.1 2217439 R 595495 CDS YP_006164409.1 386700572 12762528 complement(2218101..2219540) 1 NC_017660.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; hydrogenase 4 subunit D 2219540 hyfD 12762528 hyfD Escherichia coli KO11FL hydrogenase 4 subunit D YP_006164409.1 2218101 R 595495 CDS YP_006164410.1 386700573 12762529 complement(2219557..2220504) 1 NC_017660.1 COG0650 Formate hydrogenlyase subunit 4; hydrogenase 4, membrane subunit HyfC 2220504 hyfC 12762529 hyfC Escherichia coli KO11FL hydrogenase 4, membrane subunit HyfC YP_006164410.1 2219557 R 595495 CDS YP_006164411.1 386700574 12762530 complement(2220515..2222533) 1 NC_017660.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; hydrogenase 4 subunit B 2222533 hyfB 12762530 hyfB Escherichia coli KO11FL hydrogenase 4 subunit B YP_006164411.1 2220515 R 595495 CDS YP_006164412.1 386700575 12762531 complement(2222533..2223150) 1 NC_017660.1 COG1142 Fe-S-cluster-containing hydrogenase components 2; hydrogenase 4 Fe-S subunit 2223150 hyfA 12762531 hyfA Escherichia coli KO11FL hydrogenase 4 Fe-S subunit YP_006164412.1 2222533 R 595495 CDS YP_006164413.1 386700576 12762532 complement(2223403..2223873) 1 NC_017660.1 COG1225 Peroxiredoxin; thioredoxin-dependent thiol peroxidase 2223873 bcp 12762532 bcp Escherichia coli KO11FL thioredoxin-dependent thiol peroxidase YP_006164413.1 2223403 R 595495 CDS YP_006164414.1 386700577 12762533 complement(2223873..2224445) 1 NC_017660.1 COG2716 Glycine cleavage system regulatory protein; glycine cleavage system transcriptional repressor 2224445 gcvR 12762533 gcvR Escherichia coli KO11FL glycine cleavage system transcriptional repressor YP_006164414.1 2223873 R 595495 CDS YP_006164415.1 386700578 12762534 2224591..2225469 1 NC_017660.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase 2225469 dapA 12762534 dapA Escherichia coli KO11FL dihydrodipicolinate synthase YP_006164415.1 2224591 D 595495 CDS YP_006164416.1 386700579 12762535 2225486..2226520 1 NC_017660.1 COG3317 Uncharacterized lipoprotein; lipoprotein 2226520 bamC 12762535 bamC Escherichia coli KO11FL lipoprotein YP_006164416.1 2225486 D 595495 CDS YP_006164417.1 386700580 12762536 2226733..2227446 1 NC_017660.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 2227446 purC 12762536 purC Escherichia coli KO11FL phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_006164417.1 2226733 D 595495 CDS YP_006164418.1 386700581 12762537 2227601..2227828 1 NC_017660.1 COG4456 Virulence-associated protein and related proteins; mvpT; hypothetical protein 2227828 12762537 KO11_10465 Escherichia coli KO11FL hypothetical protein YP_006164418.1 2227601 D 595495 CDS YP_006164419.1 386700582 12762538 2227828..2228226 1 NC_017660.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain; plasmid maintenance protein 2228226 mvpA 12762538 mvpA Escherichia coli KO11FL plasmid maintenance protein YP_006164419.1 2227828 D 595495 CDS YP_006164420.1 386700583 12762539 2228442..2229236 1 NC_017660.1 COG2321 Predicted metalloprotease; ypfJ; hypothetical protein 2229236 12762539 KO11_10475 Escherichia coli KO11FL hypothetical protein YP_006164420.1 2228442 D 595495 CDS YP_006164421.1 386700584 12762540 2229251..2231266 1 NC_017660.1 COG1444 Predicted P-loop ATPase fused to an acetyltransferase; putative hydrolase 2231266 ypfI 12762540 ypfI Escherichia coli KO11FL putative hydrolase YP_006164421.1 2229251 D 595495 CDS YP_006164422.1 386700585 12762541 2231340..2232038 1 NC_017660.1 COG0400 Predicted esterase; putative hydrolase 2232038 ypfH 12762541 ypfH Escherichia coli KO11FL putative hydrolase YP_006164422.1 2231340 D 595495 CDS YP_006164423.1 386700586 12762542 complement(2232119..2232319) 1 NC_017660.1 ypfN; hypothetical protein 2232319 12762542 KO11_10490 Escherichia coli KO11FL hypothetical protein YP_006164423.1 2232119 R 595495 CDS YP_006164424.1 386700587 12762543 complement(2232347..2233474) 1 NC_017660.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase 2233474 dapE 12762543 dapE Escherichia coli KO11FL succinyl-diaminopimelate desuccinylase YP_006164424.1 2232347 R 595495 CDS YP_006164425.1 386700588 12762544 complement(2233478..2233834) 1 NC_017660.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family; putative reductase 2233834 yffB 12762544 yffB Escherichia coli KO11FL putative reductase YP_006164425.1 2233478 R 595495 CDS YP_006164426.1 386700589 12762545 complement(2234373..2237486) 1 NC_017660.1 COG0841 Cation/multidrug efflux pump; aminoglycoside/multidrug efflux system 2237486 acrD 12762545 acrD Escherichia coli KO11FL aminoglycoside/multidrug efflux system YP_006164426.1 2234373 R 595495 CDS YP_006164427.1 386700590 12762546 complement(2237650..2239350) 1 NC_017660.1 COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; nitrate/nitrite sensor protein NarQ 2239350 narQ 12762546 narQ Escherichia coli KO11FL nitrate/nitrite sensor protein NarQ YP_006164427.1 2237650 R 595495 CDS YP_006164428.1 386700591 12762547 2239556..2241535 1 NC_017660.1 COG1142 Fe-S-cluster-containing hydrogenase components 2; putative oxidoreductase Fe-S binding subunit 2241535 aegA 12762547 aegA Escherichia coli KO11FL putative oxidoreductase Fe-S binding subunit YP_006164428.1 2239556 D 595495 CDS YP_006164429.1 386700592 12762548 2241603..2242178 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; GDP-mannose pyrophosphatase NudK 2242178 nudK 12762548 nudK Escherichia coli KO11FL GDP-mannose pyrophosphatase NudK YP_006164429.1 2241603 D 595495 CDS YP_006164430.1 386700593 12762549 2242304..2243131 1 NC_017660.1 COG1088 dTDP-D-glucose 4,6-dehydratase; truncated; ypfG1; hypothetical protein 2243131 12762549 KO11_10525 Escherichia coli KO11FL hypothetical protein YP_006164430.1 2242304 D 595495 CDS YP_006164431.1 386700594 12762550 2243153..2243347 1 NC_017660.1 ypfG2; hypothetical protein 2243347 12762550 KO11_10530 Escherichia coli KO11FL hypothetical protein YP_006164431.1 2243153 D 595495 CDS YP_006164432.1 386700595 12762551 complement(2243443..2245446) 1 NC_017660.1 COG0021 Transketolase; transketolase 2245446 tktB 12762551 tktB Escherichia coli KO11FL transketolase YP_006164432.1 2243443 R 595495 CDS YP_006164433.1 386700596 12762552 complement(2245466..2246416) 1 NC_017660.1 COG0176 Transaldolase; transaldolase A 2246416 talA 12762552 talA Escherichia coli KO11FL transaldolase A YP_006164433.1 2245466 R 595495 CDS YP_006164434.1 386700597 12762553 2246705..2248984 1 NC_017660.1 COG0281 Malic enzyme; bifunctional malic enzyme oxidoreductase/phosphotransacetylase 2248984 maeB 12762553 maeB Escherichia coli KO11FL bifunctional malic enzyme oxidoreductase/phosphotransacetylase YP_006164434.1 2246705 D 595495 CDS YP_006164435.1 386700598 12762554 2249277..2249612 1 NC_017660.1 COG4810 Ethanolamine utilization protein; carboxysome structural protein EutS 2249612 eutS 12762554 eutS Escherichia coli KO11FL carboxysome structural protein EutS YP_006164435.1 2249277 D 595495 CDS YP_006164436.1 386700599 12762555 2249625..2250104 1 NC_017660.1 COG4917 Ethanolamine utilization protein; ethanolamine utilization protein EutP 2250104 eutP 12762555 eutP Escherichia coli KO11FL ethanolamine utilization protein EutP YP_006164436.1 2249625 D 595495 CDS YP_006164437.1 386700600 12762556 2250079..2250780 1 NC_017660.1 COG4766 Ethanolamine utilization protein; ethanolamine utilization protein EutQ 2250780 eutQ 12762556 eutQ Escherichia coli KO11FL ethanolamine utilization protein EutQ YP_006164437.1 2250079 D 595495 CDS YP_006164438.1 386700601 12762557 2250777..2251580 1 NC_017660.1 COG4812 Ethanolamine utilization cobalamin adenosyltransferase; ethanolamine utilization cobalamin adenosyltransferase 2251580 eutT 12762557 eutT Escherichia coli KO11FL ethanolamine utilization cobalamin adenosyltransferase YP_006164438.1 2250777 D 595495 CDS YP_006164439.1 386700602 12762558 2251577..2252593 1 NC_017660.1 COG0280 Phosphotransacetylase; phosphotransacetylase 2252593 eutD 12762558 eutD Escherichia coli KO11FL phosphotransacetylase YP_006164439.1 2251577 D 595495 CDS YP_006164440.1 386700603 12762559 2252590..2252925 1 NC_017660.1 COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; carboxysome structural protein EutM 2252925 eutM 12762559 eutM Escherichia coli KO11FL carboxysome structural protein EutM YP_006164440.1 2252590 D 595495 CDS YP_006164441.1 386700604 12762560 2253032..2253319 1 NC_017660.1 COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; ethanolamine catabolic microcompartment shell protein EutN 2253319 eutN 12762560 eutN Escherichia coli KO11FL ethanolamine catabolic microcompartment shell protein EutN YP_006164441.1 2253032 D 595495 CDS YP_006164442.1 386700605 12762561 2253331..2254734 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase EutE 2254734 eutE 12762561 eutE Escherichia coli KO11FL aldehyde dehydrogenase EutE YP_006164442.1 2253331 D 595495 CDS YP_006164443.1 386700606 12762562 2254745..2255581 1 NC_017660.1 COG4820 Ethanolamine utilization protein, possible chaperonin; ethanolamine utilization protein EutJ 2255581 eutJ 12762562 eutJ Escherichia coli KO11FL ethanolamine utilization protein EutJ YP_006164443.1 2254745 D 595495 CDS YP_006164444.1 386700607 12762563 2255571..2256758 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; ethanol dehydrogenase EutG 2256758 eutG 12762563 eutG Escherichia coli KO11FL ethanol dehydrogenase EutG YP_006164444.1 2255571 D 595495 CDS YP_006164445.1 386700608 12762564 2256875..2258101 1 NC_017660.1 COG3192 Ethanolamine utilization protein; ethanolamine utilization protein EutH 2258101 eutH 12762564 eutH Escherichia coli KO11FL ethanolamine utilization protein EutH YP_006164445.1 2256875 D 595495 CDS YP_006164446.1 386700609 12762565 2258098..2259501 1 NC_017660.1 COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; reactivating factor for ethanolamine ammonia lyase 2259501 eutA 12762565 eutA Escherichia coli KO11FL reactivating factor for ethanolamine ammonia lyase YP_006164446.1 2258098 D 595495 CDS YP_006164447.1 386700610 12762566 2259513..2260874 1 NC_017660.1 COG4303 Ethanolamine ammonia-lyase, large subunit; ethanolamine ammonia lyase large subunit 2260874 eutB 12762566 eutB Escherichia coli KO11FL ethanolamine ammonia lyase large subunit YP_006164447.1 2259513 D 595495 CDS YP_006164448.1 386700611 12762567 2260895..2261782 1 NC_017660.1 COG4302 Ethanolamine ammonia-lyase, small subunit; ethanolamine ammonia-lyase small subunit 2261782 eutC 12762567 eutC Escherichia coli KO11FL ethanolamine ammonia-lyase small subunit YP_006164448.1 2260895 D 595495 CDS YP_006164449.1 386700612 12762568 2261792..2262451 1 NC_017660.1 COG4816 Ethanolamine utilization protein; ethanolamine utilization protein EutL 2262451 eutL 12762568 eutL Escherichia coli KO11FL ethanolamine utilization protein EutL YP_006164449.1 2261792 D 595495 CDS YP_006164450.1 386700613 12762569 2262464..2262964 1 NC_017660.1 COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; carboxysome structural protein EutK 2262964 eutK 12762569 eutK Escherichia coli KO11FL carboxysome structural protein EutK YP_006164450.1 2262464 D 595495 CDS YP_006164451.1 386700614 12762570 2263010..2264062 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator EutR 2264062 eutR 12762570 eutR Escherichia coli KO11FL transcriptional regulator EutR YP_006164451.1 2263010 D 595495 CDS YP_006164452.1 386700615 12762571 complement(2264068..2264967) 1 NC_017660.1 COG0408 Coproporphyrinogen III oxidase; coproporphyrinogen III oxidase 2264967 hemF 12762571 hemF Escherichia coli KO11FL coproporphyrinogen III oxidase YP_006164452.1 2264068 R 595495 CDS YP_006164453.1 386700616 12762572 complement(2264971..2265840) 1 NC_017660.1 COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase I 2265840 amiA 12762572 amiA Escherichia coli KO11FL N-acetylmuramoyl-l-alanine amidase I YP_006164453.1 2264971 R 595495 CDS YP_006164454.1 386700617 12762573 2266054..2266479 1 NC_017660.1 COG0456 Acetyltransferases; putative acetyltransferase 2266479 ypeA 12762573 ypeA Escherichia coli KO11FL putative acetyltransferase YP_006164454.1 2266054 D 595495 CDS YP_006164455.1 386700618 12762574 2266466..2266915 1 NC_017660.1 yfeZ; hypothetical protein 2266915 12762574 KO11_10650 Escherichia coli KO11FL hypothetical protein YP_006164455.1 2266466 D 595495 CDS YP_006164456.1 386700619 12762575 2266976..2267551 1 NC_017660.1 RpoE-regulated lipoprotein 2267551 yfeY 12762575 yfeY Escherichia coli KO11FL RpoE-regulated lipoprotein YP_006164456.1 2266976 D 595495 CDS YP_006164457.1 386700620 12762576 2267647..2268546 1 NC_017660.1 COG2837 Predicted iron-dependent peroxidase; dyp-type peroxidase family protein 2268546 yfeX 12762576 yfeX Escherichia coli KO11FL dyp-type peroxidase family protein YP_006164457.1 2267647 D 595495 CDS YP_006164458.1 386700621 12762577 complement(2268604..2269896) 1 NC_017660.1 COG1680 Beta-lactamase class C and other penicillin binding proteins; putative periplasmic esterase 2269896 yfeW 12762577 yfeW Escherichia coli KO11FL putative periplasmic esterase YP_006164458.1 2268604 R 595495 CDS YP_006164459.1 386700622 12762578 complement(2269913..2271337) 1 NC_017660.1 COG1264 Phosphotransferase system IIB components; PTS system N-acetylmuramic acid transporter subunit IIBC 2271337 murP 12762578 murP Escherichia coli KO11FL PTS system N-acetylmuramic acid transporter subunit IIBC YP_006164459.1 2269913 R 595495 CDS YP_006164460.1 386700623 12762579 complement(2271341..2272237) 1 NC_017660.1 COG2103 Predicted sugar phosphate isomerase; N-acetylmuramic acid 6-phosphate etherase 2272237 murQ 12762579 murQ Escherichia coli KO11FL N-acetylmuramic acid 6-phosphate etherase YP_006164460.1 2271341 R 595495 CDS YP_006164461.1 386700624 12762580 2272401..2273258 1 NC_017660.1 COG1737 Transcriptional regulators; transcriptional regulator MurR 2273258 murR 12762580 murR Escherichia coli KO11FL transcriptional regulator MurR YP_006164461.1 2272401 D 595495 CDS YP_006164462.1 386700625 12762581 2273387..2274178 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 2274178 ucpA 12762581 ucpA Escherichia coli KO11FL short chain dehydrogenase YP_006164462.1 2273387 D 595495 CDS YP_006164463.1 386700626 12762582 2274349..2275365 1 NC_017660.1 COG4150 ABC-type sulfate transport system, periplasmic component; thiosulfate transporter subunit 2275365 cysP 12762582 cysP Escherichia coli KO11FL thiosulfate transporter subunit YP_006164463.1 2274349 D 595495 CDS YP_006164464.1 386700627 12762583 2275365..2276198 1 NC_017660.1 COG0555 ABC-type sulfate transport system, permease component; sulfate/thiosulfate transporter subunit 2276198 cysU 12762583 cysU Escherichia coli KO11FL sulfate/thiosulfate transporter subunit YP_006164464.1 2275365 D 595495 CDS YP_006164465.1 386700628 12762584 2276198..2277073 1 NC_017660.1 COG4208 ABC-type sulfate transport system, permease component; sulfate/thiosulfate transporter permease subunit 2277073 cysW 12762584 cysW Escherichia coli KO11FL sulfate/thiosulfate transporter permease subunit YP_006164465.1 2276198 D 595495 CDS YP_006164466.1 386700629 12762585 2277063..2278160 1 NC_017660.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; sulfate/thiosulfate transporter subunit 2278160 cysA 12762585 cysA Escherichia coli KO11FL sulfate/thiosulfate transporter subunit YP_006164466.1 2277063 D 595495 CDS YP_006164467.1 386700630 12762586 2278294..2279205 1 NC_017660.1 COG0031 Cysteine synthase; cysteine synthase B 2279205 cysM 12762586 cysM Escherichia coli KO11FL cysteine synthase B YP_006164467.1 2278294 D 595495 CDS YP_006164468.1 386700631 12762587 complement(2279208..2279576) 1 NC_017660.1 yfeK; hypothetical protein 2279576 12762587 KO11_10715 Escherichia coli KO11FL hypothetical protein YP_006164468.1 2279208 R 595495 CDS YP_006164469.1 386700632 12762588 2279681..2280532 1 NC_017660.1 COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase 2280532 pdxK 12762588 pdxK Escherichia coli KO11FL pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase YP_006164469.1 2279681 D 595495 CDS YP_006164470.1 386700633 12762589 complement(2280574..2281083) 1 NC_017660.1 COG2190 Phosphotransferase system IIA components; PTS system glucose-specific transporter 2281083 crr 12762589 crr Escherichia coli KO11FL PTS system glucose-specific transporter YP_006164470.1 2280574 R 595495 CDS YP_006164471.1 386700634 12762590 complement(2281124..2282851) 1 NC_017660.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); phosphoenolpyruvate-protein phosphotransferase 2282851 ptsI 12762590 ptsI Escherichia coli KO11FL phosphoenolpyruvate-protein phosphotransferase YP_006164471.1 2281124 R 595495 CDS YP_006164472.1 386700635 12762591 complement(2282896..2283153) 1 NC_017660.1 COG1925 Phosphotransferase system, HPr-related proteins; PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr 2283153 ptsH 12762591 ptsH Escherichia coli KO11FL PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr YP_006164472.1 2282896 R 595495 CDS YP_006164473.1 386700636 12762592 complement(2283537..2284508) 1 NC_017660.1 COG0031 Cysteine synthase; cysteine synthase A 2284508 cysK 12762592 cysK Escherichia coli KO11FL cysteine synthase A YP_006164473.1 2283537 R 595495 CDS YP_006164474.1 386700637 12762593 complement(2284693..2285454) 1 NC_017660.1 COG2981 Uncharacterized protein involved in cysteine biosynthesis; putative sulfate transport protein CysZ 2285454 cysZ 12762593 cysZ Escherichia coli KO11FL putative sulfate transport protein CysZ YP_006164474.1 2284693 R 595495 CDS YP_006164475.1 386700638 12762594 2285687..2286670 1 NC_017660.1 COG3115 Cell division protein; cell division protein ZipA 2286670 zipA 12762594 zipA Escherichia coli KO11FL cell division protein ZipA YP_006164475.1 2285687 D 595495 CDS YP_006164476.1 386700639 12762595 2286741..2288756 1 NC_017660.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA 2288756 ligA 12762595 ligA Escherichia coli KO11FL NAD-dependent DNA ligase LigA YP_006164476.1 2286741 D 595495 CDS YP_006164477.1 386700640 12762596 2288758..2288976 1 NC_017660.1 COG3530 Uncharacterized protein conserved in bacteria; ypeB; hypothetical protein 2288976 12762596 KO11_10760 Escherichia coli KO11FL hypothetical protein YP_006164477.1 2288758 D 595495 CDS YP_006164478.1 386700641 12762597 complement(2288973..2289971) 1 NC_017660.1 COG0385 Predicted Na+-dependent transporter; putative cytochrome oxidase 2289971 yfeH 12762597 yfeH Escherichia coli KO11FL putative cytochrome oxidase YP_006164478.1 2288973 R 595495 CDS YP_006164479.1 386700642 12762598 2290061..2290987 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 2290987 yfeR 12762598 yfeR Escherichia coli KO11FL LysR family transcriptional regulator YP_006164479.1 2290061 D 595495 CDS YP_006164480.1 386700643 12762599 complement(2290978..2291319) 1 NC_017660.1 hypothetical protein 2291319 12762599 KO11_10775 Escherichia coli KO11FL hypothetical protein YP_006164480.1 2290978 R 595495 CDS YP_006164481.1 386700644 12762604 2292251..2293666 1 NC_017660.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase 2293666 gltX 12762604 gltX Escherichia coli KO11FL glutamyl-tRNA synthetase YP_006164481.1 2292251 D 595495 CDS YP_006164482.1 386700645 12762605 complement(2293718..2294110) 1 NC_017660.1 COG1396 Predicted transcriptional regulators; putative DNA-binding transcriptional regulator 2294110 yfeD 12762605 yfeD Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006164482.1 2293718 R 595495 CDS YP_006164483.1 386700646 12762606 complement(2294112..2294456) 1 NC_017660.1 yfeC; hypothetical protein 2294456 12762606 KO11_10790 Escherichia coli KO11FL hypothetical protein YP_006164483.1 2294112 R 595495 CDS YP_006164484.1 386700647 12762608 2294976..2297165 1 NC_017660.1 COG2199 FOG: GGDEF domain; yfeA; hypothetical protein 2297165 12762608 KO11_10795 Escherichia coli KO11FL hypothetical protein YP_006164484.1 2294976 D 595495 CDS YP_006164485.1 386700648 12762609 complement(2297215..2298417) 1 NC_017660.1 COG1972 Nucleoside permease; nucleoside (except guanosine) transporter NupC 2298417 nupC 12762609 nupC Escherichia coli KO11FL nucleoside (except guanosine) transporter NupC YP_006164485.1 2297215 R 595495 CDS YP_006164486.1 386700649 12762610 2298816..2299991 1 NC_017660.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; manganese transport protein MntH 2299991 mntH 12762610 mntH Escherichia coli KO11FL manganese transport protein MntH YP_006164486.1 2298816 D 595495 CDS YP_006164487.1 386700650 12762611 complement(2300132..2300458) 1 NC_017660.1 ypeC; hypothetical protein 2300458 12762611 KO11_10810 Escherichia coli KO11FL hypothetical protein YP_006164487.1 2300132 R 595495 CDS YP_006164488.1 386700651 12762612 complement(2300573..2301829) 1 NC_017660.1 COG0038 Chloride channel protein EriC; putative ion channel protein 2301829 yfeO 12762612 yfeO Escherichia coli KO11FL putative ion channel protein YP_006164488.1 2300573 R 595495 CDS YP_006164489.1 386700652 12762613 2302033..2302998 1 NC_017660.1 COG0837 Glucokinase; glucokinase 2302998 glk 12762613 glk Escherichia coli KO11FL glucokinase YP_006164489.1 2302033 D 595495 CDS YP_006164490.1 386700653 12762614 2303217..2303543 1 NC_017660.1 COG1445 Phosphotransferase system fructose-specific component IIB; putative enzyme IIB component of PTS 2303543 fryB 12762614 fryB Escherichia coli KO11FL putative enzyme IIB component of PTS YP_006164490.1 2303217 D 595495 CDS YP_006164491.1 386700654 12762615 2303565..2304812 1 NC_017660.1 COG1299 Phosphotransferase system, fructose-specific IIC component; Fructose-like permease IIC component 2304812 fryC 12762615 fryC Escherichia coli KO11FL Fructose-like permease IIC component YP_006164491.1 2303565 D 595495 CDS YP_006164492.1 386700655 12762616 2304827..2305912 1 NC_017660.1 COG0006 Xaa-Pro aminopeptidase; aminopeptidase 2305912 ypdF 12762616 ypdF Escherichia coli KO11FL aminopeptidase YP_006164492.1 2304827 D 595495 CDS YP_006164493.1 386700656 12762617 2305912..2306949 1 NC_017660.1 COG1363 Cellulase M and related proteins; exoaminopeptidase 2306949 ypdE 12762617 ypdE Escherichia coli KO11FL exoaminopeptidase YP_006164493.1 2305912 D 595495 CDS YP_006164494.1 386700657 12762618 2306974..2309469 1 NC_017660.1 COG1925 Phosphotransferase system, HPr-related proteins; putative fused PTS enzymes (multiphosphoryl transfer protein): Hpr component, enzyme I component, enzyme IIA component 2309469 fryA 12762618 fryA Escherichia coli KO11FL putative fused PTS enzymes (multiphosphoryl transfer protein): Hpr component, enzyme I component, enzyme IIA component YP_006164494.1 2306974 D 595495 CDS YP_006164495.1 386700658 12762619 complement(2309472..2310329) 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding protein, ARAC-type 2310329 ypdC 12762619 ypdC Escherichia coli KO11FL putative DNA-binding protein, ARAC-type YP_006164495.1 2309472 R 595495 CDS YP_006164496.1 386700659 12762620 complement(2310342..2311076) 1 NC_017660.1 COG3279 Response regulator of the LytR/AlgR family; ypdB; hypothetical protein 2311076 12762620 KO11_10855 Escherichia coli KO11FL hypothetical protein YP_006164496.1 2310342 R 595495 CDS YP_006164497.1 386700660 12762621 complement(2311091..2312770) 1 NC_017660.1 COG3275 Putative regulator of cell autolysis; sensor histidine kinase 2312770 ypdA 12762621 ypdA Escherichia coli KO11FL sensor histidine kinase YP_006164497.1 2311091 R 595495 CDS YP_006164498.1 386700661 12762622 2313165..2314403 1 NC_017660.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase; aminotransferase 2314403 yfdZ 12762622 yfdZ Escherichia coli KO11FL aminotransferase YP_006164498.1 2313165 D 595495 CDS YP_006164499.1 386700662 12762623 complement(2314895..2315815) 1 NC_017660.1 COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis palmitoleoyl acyltransferase 2315815 lpxP 12762623 lpxP Escherichia coli KO11FL lipid A biosynthesis palmitoleoyl acyltransferase YP_006164499.1 2314895 R 595495 CDS YP_006164500.1 386700663 12762624 2316168..2316410 1 NC_017660.1 putative inner membrane protein 2316410 yfdY 12762624 yfdY Escherichia coli KO11FL putative inner membrane protein YP_006164500.1 2316168 D 595495 CDS YP_006164501.1 386700664 12762625 complement(2316487..2316762) 1 NC_017660.1 putative lipoprotein 2316762 ypdI 12762625 ypdI Escherichia coli KO11FL putative lipoprotein YP_006164501.1 2316487 R 595495 CDS YP_006164502.1 386700665 12762626 2317058..2317690 1 NC_017660.1 yfdX; hypothetical protein 2317690 12762626 KO11_10885 Escherichia coli KO11FL hypothetical protein YP_006164502.1 2317058 D 595495 CDS YP_006164503.1 386700666 12762627 2318203..2319453 1 NC_017660.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; formyl-coenzyme A transferase 2319453 frc 12762627 frc Escherichia coli KO11FL formyl-coenzyme A transferase YP_006164503.1 2318203 D 595495 CDS YP_006164504.1 386700667 12762628 2319507..2321201 1 NC_017660.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; putative oxalyl-CoA decarboxylase 2321201 oxc 12762628 oxc Escherichia coli KO11FL putative oxalyl-CoA decarboxylase YP_006164504.1 2319507 D 595495 CDS YP_006164505.1 386700668 12762629 2321271..2322215 1 NC_017660.1 COG0679 Predicted permeases; putative transporter YfdV 2322215 yfdV 12762629 yfdV Escherichia coli KO11FL putative transporter YfdV YP_006164505.1 2321271 D 595495 CDS YP_006164506.1 386700669 12762630 2322289..2323434 1 NC_017660.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; putative CoA-transferase 2323434 yfdE 12762630 yfdE Escherichia coli KO11FL putative CoA-transferase YP_006164506.1 2322289 D 595495 CDS YP_006164507.1 386700670 12762631 complement(2323490..2327083) 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; hybrid sensory histidine kinase in two-component regulatory system with EvgA 2327083 evgS 12762631 evgS Escherichia coli KO11FL hybrid sensory histidine kinase in two-component regulatory system with EvgA YP_006164507.1 2323490 R 595495 CDS YP_006164508.1 386700671 12762632 complement(2327088..2327702) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; DNA-binding transcriptional activator EvgA 2327702 evgA 12762632 evgA Escherichia coli KO11FL DNA-binding transcriptional activator EvgA YP_006164508.1 2327088 R 595495 CDS YP_006164509.1 386700672 12762633 2328118..2329281 1 NC_017660.1 COG1566 Multidrug resistance efflux pump; multidrug resistance protein 2329281 emrK 12762633 emrK Escherichia coli KO11FL multidrug resistance protein YP_006164509.1 2328118 D 595495 CDS YP_006164510.1 386700673 12762634 2329281..2330819 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative multidrug efflux system 2330819 emrY 12762634 emrY Escherichia coli KO11FL putative multidrug efflux system YP_006164510.1 2329281 D 595495 CDS YP_006164511.1 386700674 12762635 complement(2330927..2332255) 1 NC_017660.1 COG3048 D-serine dehydratase; D-serine dehydratase 2332255 dsdA 12762635 dsdA Escherichia coli KO11FL D-serine dehydratase YP_006164511.1 2330927 R 595495 CDS YP_006164512.1 386700675 12762636 complement(2332273..2332491) 1 NC_017660.1 COG2610 H+/gluconate symporter and related permeases; permease DsdX 2332491 dsdX 12762636 dsdX Escherichia coli KO11FL permease DsdX YP_006164512.1 2332273 R 595495 CDS YP_006164513.1 386700676 12762637 2332659..2333717 1 NC_017660.1 COG1609 Transcriptional regulators; Sucrose operon repressor (Csc operon regulatory protein) 2333717 cscR 12762637 cscR Escherichia coli KO11FL Sucrose operon repressor (Csc operon regulatory protein) YP_006164513.1 2332659 D 595495 CDS YP_006164514.1 386700677 12762638 complement(2333725..2335158) 1 NC_017660.1 COG1621 Beta-fructosidases (levanase/invertase); sucrose-6-phosphate hydrolase 2335158 cscA 12762638 cscA Escherichia coli KO11FL sucrose-6-phosphate hydrolase YP_006164514.1 2333725 R 595495 CDS YP_006164515.1 386700678 12762639 2335374..2336288 1 NC_017660.1 COG0524 Sugar kinases, ribokinase family; aminoimidazole riboside kinase 2336288 cscK 12762639 cscK Escherichia coli KO11FL aminoimidazole riboside kinase YP_006164515.1 2335374 D 595495 CDS YP_006164516.1 386700679 12762640 2336360..2337607 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; sucrose permease 2337607 cscB 12762640 cscB Escherichia coli KO11FL sucrose permease YP_006164516.1 2336360 D 595495 CDS YP_006164517.1 386700680 12762642 complement(2338199..2339131) 1 NC_017660.1 COG2116 Formate/nitrite family of transporters; yfdC; hypothetical protein 2339131 12762642 KO11_10965 Escherichia coli KO11FL hypothetical protein YP_006164517.1 2338199 R 595495 CDS YP_006164518.1 386700681 12762643 2339425..2340180 1 NC_017660.1 COG2853 Surface lipoprotein; ABC transporter outer membrane lipoprotein 2340180 vacJ 12762643 vacJ Escherichia coli KO11FL ABC transporter outer membrane lipoprotein YP_006164518.1 2339425 D 595495 CDS YP_006164519.1 386700682 12762644 complement(2340362..2341420) 1 NC_017660.1 yfdF; hypothetical protein 2341420 12762644 KO11_10975 Escherichia coli KO11FL hypothetical protein YP_006164519.1 2340362 R 595495 CDS YP_006164520.1 386700683 12762645 complement(2341785..2343125) 1 NC_017660.1 COG2067 Long-chain fatty acid transport protein; long-chain fatty acid outer membrane transporter 2343125 fadL 12762645 fadL Escherichia coli KO11FL long-chain fatty acid outer membrane transporter YP_006164520.1 2341785 R 595495 CDS YP_006164521.1 386700684 12762646 2343497..2343781 1 NC_017660.1 COG3691 Uncharacterized protein conserved in bacteria; yfcZ; hypothetical protein 2343781 12762646 KO11_10985 Escherichia coli KO11FL hypothetical protein YP_006164521.1 2343497 D 595495 CDS YP_006164522.1 386700685 12762647 2343961..2345271 1 NC_017660.1 COG0183 Acetyl-CoA acetyltransferase; 3-ketoacyl-CoA thiolase 2345271 fadI 12762647 fadI Escherichia coli KO11FL 3-ketoacyl-CoA thiolase YP_006164522.1 2343961 D 595495 CDS YP_006164523.1 386700686 12762648 2345271..2347415 1 NC_017660.1 COG1024 Enoyl-CoA hydratase/carnithine racemase; multifunctional fatty acid oxidation complex subunit alpha 2347415 fadJ 12762648 fadJ Escherichia coli KO11FL multifunctional fatty acid oxidation complex subunit alpha YP_006164523.1 2345271 D 595495 CDS YP_006164524.1 386700687 12762649 2347618..2348103 1 NC_017660.1 COG2062 Phosphohistidine phosphatase SixA; phosphohistidine phosphatase 2348103 sixA 12762649 sixA Escherichia coli KO11FL phosphohistidine phosphatase YP_006164524.1 2347618 D 595495 CDS YP_006164525.1 386700688 12762650 2348778..2349341 1 NC_017660.1 putative fimbrial-like protein 2349341 yfcV 12762650 yfcV Escherichia coli KO11FL putative fimbrial-like protein YP_006164525.1 2348778 D 595495 CDS YP_006164526.1 386700689 12762651 2349423..2352065 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; putative fimbrial outer membrane usher protein StfC 2352065 yfcU 12762651 yfcU Escherichia coli KO11FL putative fimbrial outer membrane usher protein StfC YP_006164526.1 2349423 D 595495 CDS YP_006164527.1 386700690 12762652 2352085..2352837 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; putative chaperone 2352837 yfcS 12762652 yfcS Escherichia coli KO11FL putative chaperone YP_006164527.1 2352085 D 595495 CDS YP_006164528.1 386700691 12762653 2352854..2353360 1 NC_017660.1 putative minor fimbrial subunit 2353360 yfcR 12762653 yfcR Escherichia coli KO11FL putative minor fimbrial subunit YP_006164528.1 2352854 D 595495 CDS YP_006164529.1 386700692 12762654 2353357..2353827 1 NC_017660.1 putative fimbrial subunit protein 2353827 yfcQ 12762654 yfcQ Escherichia coli KO11FL putative fimbrial subunit protein YP_006164529.1 2353357 D 595495 CDS YP_006164530.1 386700693 12762655 2353824..2354348 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial subunit protein 2354348 yfcP 12762655 yfcP Escherichia coli KO11FL putative fimbrial subunit protein YP_006164530.1 2353824 D 595495 CDS YP_006164531.1 386700694 12762656 2354350..2355207 1 NC_017660.1 yfcO; hypothetical protein 2355207 12762656 KO11_11035 Escherichia coli KO11FL hypothetical protein YP_006164531.1 2354350 D 595495 CDS YP_006164532.1 386700695 12762657 complement(2355329..2355880) 1 NC_017660.1 COG2840 Uncharacterized protein conserved in bacteria; yfcN; hypothetical protein 2355880 12762657 KO11_11040 Escherichia coli KO11FL hypothetical protein YP_006164532.1 2355329 R 595495 CDS YP_006164533.1 386700696 12762658 2356046..2356978 1 NC_017660.1 COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2356978 prmB 12762658 prmB Escherichia coli KO11FL N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_006164533.1 2356046 D 595495 CDS YP_006164534.1 386700697 12762659 2357013..2358098 1 NC_017660.1 COG0082 Chorismate synthase; chorismate synthase 2358098 aroC 12762659 aroC Escherichia coli KO11FL chorismate synthase YP_006164534.1 2357013 D 595495 CDS YP_006164535.1 386700698 12762660 2358102..2358926 1 NC_017660.1 COG3770 Murein endopeptidase; penicillin-insensitive murein endopeptidase 2358926 mepA 12762660 mepA Escherichia coli KO11FL penicillin-insensitive murein endopeptidase YP_006164535.1 2358102 D 595495 CDS YP_006164536.1 386700699 12762661 2358926..2359735 1 NC_017660.1 COG0730 Predicted permeases; yfcA; hypothetical protein 2359735 12762661 KO11_11060 Escherichia coli KO11FL hypothetical protein YP_006164536.1 2358926 D 595495 CDS YP_006164537.1 386700700 12762662 2359735..2360283 1 NC_017660.1 COG3101 Uncharacterized protein conserved in bacteria; yfcM; hypothetical protein 2360283 12762662 KO11_11065 Escherichia coli KO11FL hypothetical protein YP_006164537.1 2359735 D 595495 CDS YP_006164538.1 386700701 12762663 2360317..2360595 1 NC_017660.1 yfcL; hypothetical protein 2360595 12762663 KO11_11070 Escherichia coli KO11FL hypothetical protein YP_006164538.1 2360317 D 595495 CDS YP_006164539.1 386700702 12762664 complement(2360716..2362722) 1 NC_017660.1 COG4121 Uncharacterized conserved protein; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase 2362722 mnmC 12762664 mnmC Escherichia coli KO11FL bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase YP_006164539.1 2360716 R 595495 CDS YP_006164540.1 386700703 12762665 2362881..2364101 1 NC_017660.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-ACP synthase 2364101 fabB 12762665 fabB Escherichia coli KO11FL 3-oxoacyl-ACP synthase YP_006164540.1 2362881 D 595495 CDS YP_006164541.1 386700704 12762666 2364412..2365590 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 2365590 yfcJ 12762666 yfcJ Escherichia coli KO11FL putative transporter YP_006164541.1 2364412 D 595495 CDS YP_006164542.1 386700705 12762667 complement(2365587..2366582) 1 NC_017660.1 flagella biosynthesis regulator 2366582 flk 12762667 flk Escherichia coli KO11FL flagella biosynthesis regulator YP_006164542.1 2365587 R 595495 CDS YP_006164543.1 386700706 12762668 2366681..2367817 1 NC_017660.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; erythronate-4-phosphate dehydrogenase PdxB 2367817 pdxB 12762668 pdxB Escherichia coli KO11FL erythronate-4-phosphate dehydrogenase PdxB YP_006164543.1 2366681 D 595495 CDS YP_006164544.1 386700707 12762669 2367883..2368896 1 NC_017660.1 COG0136 Aspartate-semialdehyde dehydrogenase; putative semialdehyde dehydrogenase 2368896 usg 12762669 usg Escherichia coli KO11FL putative semialdehyde dehydrogenase YP_006164544.1 2367883 D 595495 CDS YP_006164545.1 386700708 12762670 2368896..2369708 1 NC_017660.1 COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 2369708 truA 12762670 truA Escherichia coli KO11FL tRNA pseudouridine synthase A YP_006164545.1 2368896 D 595495 CDS YP_006164546.1 386700709 12762671 2369791..2370450 1 NC_017660.1 COG0586 Uncharacterized membrane-associated protein; dedA; hypothetical protein 2370450 12762671 KO11_11110 Escherichia coli KO11FL hypothetical protein YP_006164546.1 2369791 D 595495 CDS YP_006164547.1 386700710 12762672 2370606..2371520 1 NC_017660.1 COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta 2371520 accD 12762672 accD Escherichia coli KO11FL acetyl-CoA carboxylase subunit beta YP_006164547.1 2370606 D 595495 CDS YP_006164548.1 386700711 12762673 2371590..2372858 1 NC_017660.1 COG0285 Folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 2372858 folC 12762673 folC Escherichia coli KO11FL bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_006164548.1 2371590 D 595495 CDS YP_006164549.1 386700712 12762674 2372848..2373510 1 NC_017660.1 COG3147 Uncharacterized protein conserved in bacteria; cell division protein DedD 2373510 dedD 12762674 dedD Escherichia coli KO11FL cell division protein DedD YP_006164549.1 2372848 D 595495 CDS YP_006164550.1 386700713 12762675 2373769..2374257 1 NC_017660.1 COG1286 Uncharacterized membrane protein, required for colicin V production; colicin V production protein 2374257 cvpA 12762675 cvpA Escherichia coli KO11FL colicin V production protein YP_006164550.1 2373769 D 595495 CDS YP_006164551.1 386700714 12762676 2374294..2375811 1 NC_017660.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; amidophosphoribosyltransferase 2375811 purF 12762676 purF Escherichia coli KO11FL amidophosphoribosyltransferase YP_006164551.1 2374294 D 595495 CDS YP_006164552.1 386700715 12762677 2375906..2376475 1 NC_017660.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2376475 ubiX 12762677 ubiX Escherichia coli KO11FL 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_006164552.1 2375906 D 595495 CDS YP_006164553.1 386700716 12762678 2376741..2377523 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; lysine/arginine/ornithine ABC transporter substrate-binding periplasmic protein 2377523 argT 12762678 argT Escherichia coli KO11FL lysine/arginine/ornithine ABC transporter substrate-binding periplasmic protein YP_006164553.1 2376741 D 595495 CDS YP_006164554.1 386700717 12762679 2377744..2378526 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; histidine ABC transporter substrate-binding protein HisJ 2378526 hisJ 12762679 hisJ Escherichia coli KO11FL histidine ABC transporter substrate-binding protein HisJ YP_006164554.1 2377744 D 595495 CDS YP_006164555.1 386700718 12762680 2378616..2379302 1 NC_017660.1 COG4215 ABC-type arginine transport system, permease component; histidine/lysine/arginine/ornithine ABC transporter permease HisQ 2379302 hisQ 12762680 hisQ Escherichia coli KO11FL histidine/lysine/arginine/ornithine ABC transporter permease HisQ YP_006164555.1 2378616 D 595495 CDS YP_006164556.1 386700719 12762681 2379299..2380015 1 NC_017660.1 COG4160 ABC-type arginine/histidine transport system, permease component; histidine/lysine/arginine/ornithine ABC transporter permease HisM 2380015 hisM 12762681 hisM Escherichia coli KO11FL histidine/lysine/arginine/ornithine ABC transporter permease HisM YP_006164556.1 2379299 D 595495 CDS YP_006164557.1 386700720 12762682 2380023..2380796 1 NC_017660.1 COG4598 ABC-type histidine transport system, ATPase component; histidine/lysine/arginine/ornithine transporter subunit 2380796 hisP 12762682 hisP Escherichia coli KO11FL histidine/lysine/arginine/ornithine transporter subunit YP_006164557.1 2380023 D 595495 CDS YP_006164558.1 386700721 12762683 2380993..2381883 1 NC_017660.1 putative transposase 2381883 yfcI 12762683 yfcI Escherichia coli KO11FL putative transposase YP_006164558.1 2380993 D 595495 CDS YP_006164559.1 386700722 12762684 complement(2381931..2382824) 1 NC_017660.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase; yfcH; hypothetical protein 2382824 12762684 KO11_11175 Escherichia coli KO11FL hypothetical protein YP_006164559.1 2381931 R 595495 CDS YP_006164560.1 386700723 12762685 complement(2382845..2383207) 1 NC_017660.1 COG1539 Dihydroneopterin aldolase; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2383207 folX 12762685 folX Escherichia coli KO11FL D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_006164560.1 2382845 R 595495 CDS YP_006164561.1 386700724 12762686 complement(2383264..2383911) 1 NC_017660.1 COG0625 Glutathione S-transferase; GSH-dependent disulfide bond oxidoreductase 2383911 yfcG 12762686 yfcG Escherichia coli KO11FL GSH-dependent disulfide bond oxidoreductase YP_006164561.1 2383264 R 595495 CDS YP_006164562.1 386700725 12762687 2384047..2384691 1 NC_017660.1 COG0625 Glutathione S-transferase; glutathione S-transferase 2384691 yfcF 12762687 yfcF Escherichia coli KO11FL glutathione S-transferase YP_006164562.1 2384047 D 595495 CDS YP_006164563.1 386700726 12762688 2384747..2385298 1 NC_017660.1 COG0622 Predicted phosphoesterase; phosphodiesterase 2385298 yfcE 12762688 yfcE Escherichia coli KO11FL phosphodiesterase YP_006164563.1 2384747 D 595495 CDS YP_006164564.1 386700727 12762689 2385356..2385898 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase YfcD 2385898 yfcD 12762689 yfcD Escherichia coli KO11FL NUDIX hydrolase YfcD YP_006164564.1 2385356 D 595495 CDS YP_006164565.1 386700728 12762690 complement(2385931..2387409) 1 NC_017660.1 COG1288 Predicted membrane protein; yfcC; hypothetical protein 2387409 12762690 KO11_11205 Escherichia coli KO11FL hypothetical protein YP_006164565.1 2385931 R 595495 CDS YP_006164566.1 386700729 12762691 complement(2387641..2389785) 1 NC_017660.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase; phosphate acetyltransferase 2389785 pta 12762691 pta Escherichia coli KO11FL phosphate acetyltransferase YP_006164566.1 2387641 R 595495 CDS YP_006164567.1 386700730 12762692 complement(2389860..2391062) 1 NC_017660.1 COG0282 Acetate kinase; acetate kinase A/propionate kinase 2 2391062 ackA 12762692 ackA Escherichia coli KO11FL acetate kinase A/propionate kinase 2 YP_006164567.1 2389860 R 595495 CDS YP_006164568.1 386700731 12762693 2391200..2391331 1 NC_017660.1 hypothetical protein 2391331 12762693 KO11_11220 Escherichia coli KO11FL hypothetical protein YP_006164568.1 2391200 D 595495 CDS YP_006164569.1 386700732 12762694 2391400..2391855 1 NC_017660.1 COG3092 Uncharacterized protein conserved in bacteria; yfbV; hypothetical protein 2391855 12762694 KO11_11225 Escherichia coli KO11FL hypothetical protein YP_006164569.1 2391400 D 595495 CDS YP_006164570.1 386700733 12762695 2391938..2392432 1 NC_017660.1 COG3013 Uncharacterized conserved protein; yfbU; hypothetical protein 2392432 12762695 KO11_11230 Escherichia coli KO11FL hypothetical protein YP_006164570.1 2391938 D 595495 CDS YP_006164571.1 386700734 12762696 2392443..2393093 1 NC_017660.1 COG0637 Predicted phosphatase/phosphohexomutase; putative phosphatase 2393093 yfbT 12762696 yfbT Escherichia coli KO11FL putative phosphatase YP_006164571.1 2392443 D 595495 CDS YP_006164572.1 386700735 12762697 2393180..2395012 1 NC_017660.1 COG0471 Di- and tricarboxylate transporters; putative transport protein 2395012 yfbS 12762697 yfbS Escherichia coli KO11FL putative transport protein YP_006164572.1 2393180 D 595495 CDS YP_006164573.1 386700736 12762698 complement(2395071..2395670) 1 NC_017660.1 COG1896 Predicted hydrolases of HD superfamily; 5'-nucleotidase 2395670 yfbR 12762698 yfbR Escherichia coli KO11FL 5'-nucleotidase YP_006164573.1 2395071 R 595495 CDS YP_006164574.1 386700737 12762699 complement(2395754..2396971) 1 NC_017660.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase; aminotransferase AlaT 2396971 yfbQ 12762699 yfbQ Escherichia coli KO11FL aminotransferase AlaT YP_006164574.1 2395754 R 595495 CDS YP_006164575.1 386700738 12762700 2397891..2398829 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional repressor LrhA 2398829 lrhA 12762700 lrhA Escherichia coli KO11FL DNA-binding transcriptional repressor LrhA YP_006164575.1 2397891 D 595495 CDS YP_006164576.1 386700739 12762701 2399460..2399903 1 NC_017660.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH:ubiquinone oxidoreductase subunit A 2399903 nuoA 12762701 nuoA Escherichia coli KO11FL NADH:ubiquinone oxidoreductase subunit A YP_006164576.1 2399460 D 595495 CDS YP_006164577.1 386700740 12762702 2399919..2400581 1 NC_017660.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 2400581 nuoB 12762702 nuoB Escherichia coli KO11FL NADH dehydrogenase subunit B YP_006164577.1 2399919 D 595495 CDS YP_006164578.1 386700741 12762703 2400675..2402477 1 NC_017660.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2402477 nuoC 12762703 nuoC Escherichia coli KO11FL bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_006164578.1 2400675 D 595495 CDS YP_006164579.1 386700742 12762704 2402480..2402980 1 NC_017660.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; NADH dehydrogenase subunit E 2402980 nuoE 12762704 nuoE Escherichia coli KO11FL NADH dehydrogenase subunit E YP_006164579.1 2402480 D 595495 CDS YP_006164580.1 386700743 12762705 2402977..2404314 1 NC_017660.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; NADH dehydrogenase I subunit F 2404314 nuoF 12762705 nuoF Escherichia coli KO11FL NADH dehydrogenase I subunit F YP_006164580.1 2402977 D 595495 CDS YP_006164581.1 386700744 12762706 2404367..2407093 1 NC_017660.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 2407093 nuoG 12762706 nuoG Escherichia coli KO11FL NADH dehydrogenase subunit G YP_006164581.1 2404367 D 595495 CDS YP_006164582.1 386700745 12762707 2407090..2408067 1 NC_017660.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H 2408067 nuoH 12762707 nuoH Escherichia coli KO11FL NADH:ubiquinone oxidoreductase subunit H YP_006164582.1 2407090 D 595495 CDS YP_006164583.1 386700746 12762708 2408082..2408624 1 NC_017660.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 2408624 nuoI 12762708 nuoI Escherichia coli KO11FL NADH dehydrogenase subunit I YP_006164583.1 2408082 D 595495 CDS YP_006164584.1 386700747 12762709 2408636..2409190 1 NC_017660.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 2409190 nuoJ 12762709 nuoJ Escherichia coli KO11FL NADH:ubiquinone oxidoreductase subunit J YP_006164584.1 2408636 D 595495 CDS YP_006164585.1 386700748 12762710 2409187..2409489 1 NC_017660.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 2409489 nuoK 12762710 nuoK Escherichia coli KO11FL NADH:ubiquinone oxidoreductase subunit K YP_006164585.1 2409187 D 595495 CDS YP_006164586.1 386700749 12762711 2409486..2411327 1 NC_017660.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 2411327 nuoL 12762711 nuoL Escherichia coli KO11FL NADH:ubiquinone oxidoreductase subunit L YP_006164586.1 2409486 D 595495 CDS YP_006164587.1 386700750 12762712 2411491..2413020 1 NC_017660.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 2413020 nuoM 12762712 nuoM Escherichia coli KO11FL NADH:ubiquinone oxidoreductase subunit M YP_006164587.1 2411491 D 595495 CDS YP_006164588.1 386700751 12762713 2413027..2414484 1 NC_017660.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 2414484 nuoN 12762713 nuoN Escherichia coli KO11FL NADH:ubiquinone oxidoreductase subunit N YP_006164588.1 2413027 D 595495 CDS YP_006164589.1 386700752 12762714 complement(2414551..2415054) 1 NC_017660.1 yfbM; hypothetical protein 2415054 12762714 KO11_11325 Escherichia coli KO11FL hypothetical protein YP_006164589.1 2414551 R 595495 CDS YP_006164590.1 386700753 12762715 complement(2415180..2415482) 1 NC_017660.1 COG2234 Predicted aminopeptidases; putative peptidase 2415482 12762715 KO11_11330 Escherichia coli KO11FL putative peptidase YP_006164590.1 2415180 R 595495 CDS YP_006164591.1 386700754 12762716 complement(2416176..2417393) 1 NC_017660.1 deubiquitinase 2417393 elaD 12762716 elaD Escherichia coli KO11FL deubiquitinase YP_006164591.1 2416176 R 595495 CDS YP_006164592.1 386700755 12762717 complement(2417584..2418519) 1 NC_017660.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; ribonuclease Z 2418519 rbn 12762717 rbn Escherichia coli KO11FL ribonuclease Z YP_006164592.1 2417584 R 595495 CDS YP_006164593.1 386700756 12762718 2418566..2419027 1 NC_017660.1 COG2153 Predicted acyltransferase; putative acyltransferase 2419027 elaA 12762718 elaA Escherichia coli KO11FL putative acyltransferase YP_006164593.1 2418566 D 595495 CDS YP_006164594.1 386700757 12762719 2419082..2419387 1 NC_017660.1 COG4575 Uncharacterized conserved protein; elaB; hypothetical protein 2419387 12762719 KO11_11350 Escherichia coli KO11FL hypothetical protein YP_006164594.1 2419082 D 595495 CDS YP_006164595.1 386700758 12762720 2419466..2420761 1 NC_017660.1 COG1169 Isochorismate synthase; menaquinone-specific isochorismate synthase 2420761 menF 12762720 menF Escherichia coli KO11FL menaquinone-specific isochorismate synthase YP_006164595.1 2419466 D 595495 CDS YP_006164596.1 386700759 12762721 2420850..2422520 1 NC_017660.1 COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 2422520 menD 12762721 menD Escherichia coli KO11FL 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_006164596.1 2420850 D 595495 CDS YP_006164597.1 386700760 12762722 2422517..2423275 1 NC_017660.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 2423275 yfbB 12762722 yfbB Escherichia coli KO11FL 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_006164597.1 2422517 D 595495 CDS YP_006164598.1 386700761 12762723 2423290..2424147 1 NC_017660.1 COG0447 Dihydroxynaphthoic acid synthase; dihydroxynaphthoic acid synthetase 2424147 menB 12762723 menB Escherichia coli KO11FL dihydroxynaphthoic acid synthetase YP_006164598.1 2423290 D 595495 CDS YP_006164599.1 386700762 12762724 2424147..2425109 1 NC_017660.1 COG1441 O-succinylbenzoate synthase; O-succinylbenzoate synthase 2425109 menC 12762724 menC Escherichia coli KO11FL O-succinylbenzoate synthase YP_006164599.1 2424147 D 595495 CDS YP_006164600.1 386700763 12762725 2425106..2426461 1 NC_017660.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; O-succinylbenzoic acid--CoA ligase 2426461 menE 12762725 menE Escherichia coli KO11FL O-succinylbenzoic acid--CoA ligase YP_006164600.1 2425106 D 595495 CDS YP_006164601.1 386700764 12762726 2426571..2426837 1 NC_017660.1 COG1601 Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain; signal transduction protein PmrD 2426837 pmrD 12762726 pmrD Escherichia coli KO11FL signal transduction protein PmrD YP_006164601.1 2426571 D 595495 CDS YP_006164602.1 386700765 12762727 complement(2426831..2427217) 1 NC_017660.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF 2427217 arnF 12762727 arnF Escherichia coli KO11FL 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YP_006164602.1 2426831 R 595495 CDS YP_006164603.1 386700766 12762728 complement(2427217..2427552) 1 NC_017660.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE 2427552 arnE 12762728 arnE Escherichia coli KO11FL 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE YP_006164603.1 2427217 R 595495 CDS YP_006164604.1 386700767 12762729 complement(2427549..2429201) 1 NC_017660.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family; 4-amino-4-deoxy-L-arabinose transferase 2429201 arnT 12762729 arnT Escherichia coli KO11FL 4-amino-4-deoxy-L-arabinose transferase YP_006164604.1 2427549 R 595495 CDS YP_006164605.1 386700768 12762730 complement(2429201..2430091) 1 NC_017660.1 COG0726 Predicted xylanase/chitin deacetylase; 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD 2430091 arnD 12762730 arnD Escherichia coli KO11FL 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD YP_006164605.1 2429201 R 595495 CDS YP_006164606.1 386700769 12762731 complement(2430088..2432070) 1 NC_017660.1 COG0223 Methionyl-tRNA formyltransferase; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 2432070 arnA 12762731 arnA Escherichia coli KO11FL bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_006164606.1 2430088 R 595495 CDS YP_006164607.1 386700770 12762732 complement(2432070..2433038) 1 NC_017660.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 2433038 arnC 12762732 arnC Escherichia coli KO11FL undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_006164607.1 2432070 R 595495 CDS YP_006164608.1 386700771 12762733 complement(2433042..2434199) 1 NC_017660.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2434199 arnB 12762733 arnB Escherichia coli KO11FL UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_006164608.1 2433042 R 595495 CDS YP_006164609.1 386700772 12762734 2434489..2435091 1 NC_017660.1 lipopolysaccharide core heptose(II)-phosphate phosphatase 2435091 ais 12762734 ais Escherichia coli KO11FL lipopolysaccharide core heptose(II)-phosphate phosphatase YP_006164609.1 2434489 D 595495 CDS YP_006164610.1 386700773 12762735 complement(2435130..2435555) 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; nucleoside triphosphatase NudI 2435555 nudI 12762735 nudI Escherichia coli KO11FL nucleoside triphosphatase NudI YP_006164610.1 2435130 R 595495 CDS YP_006164611.1 386700774 12762736 2435834..2436376 1 NC_017660.1 putative outer membrane porin protein 2436376 yfaZ 12762736 yfaZ Escherichia coli KO11FL putative outer membrane porin protein YP_006164611.1 2435834 D 595495 CDS YP_006164612.1 386700775 12762737 2436476..2437678 1 NC_017660.1 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; yfaY; hypothetical protein 2437678 12762737 KO11_11440 Escherichia coli KO11FL hypothetical protein YP_006164612.1 2436476 D 595495 CDS YP_006164613.1 386700776 12762738 2437814..2438203 1 NC_017660.1 COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; 2-keto-3-deoxy-L-rhamnonate aldolase 2438203 rhmA 12762738 rhmA Escherichia coli KO11FL 2-keto-3-deoxy-L-rhamnonate aldolase YP_006164613.1 2437814 D 595495 CDS YP_006164614.1 386700777 12762739 complement(2438244..2439146) 1 NC_017660.1 COG5464 Uncharacterized conserved protein; yfaD; hypothetical protein 2439146 12762739 KO11_11450 Escherichia coli KO11FL hypothetical protein YP_006164614.1 2438244 R 595495 CDS YP_006164615.1 386700778 12762740 complement(2439340..2440530) 1 NC_017660.1 COG0247 Fe-S oxidoreductase; sn-glycerol-3-phosphate dehydrogenase subunit C 2440530 glpC 12762740 glpC Escherichia coli KO11FL sn-glycerol-3-phosphate dehydrogenase subunit C YP_006164615.1 2439340 R 595495 CDS YP_006164616.1 386700779 12762741 complement(2440527..2441786) 1 NC_017660.1 COG3075 Anaerobic glycerol-3-phosphate dehydrogenase; anaerobic glycerol-3-phosphate dehydrogenase subunit B 2441786 glpB 12762741 glpB Escherichia coli KO11FL anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_006164616.1 2440527 R 595495 CDS YP_006164617.1 386700780 12762742 complement(2441776..2443404) 1 NC_017660.1 COG0578 Glycerol-3-phosphate dehydrogenase; sn-glycerol-3-phosphate dehydrogenase subunit A 2443404 glpA 12762742 glpA Escherichia coli KO11FL sn-glycerol-3-phosphate dehydrogenase subunit A YP_006164617.1 2441776 R 595495 CDS YP_006164618.1 386700781 12762743 2443677..2445035 1 NC_017660.1 COG2271 Sugar phosphate permease; sn-glycerol-3-phosphate transporter 2445035 glpT 12762743 glpT Escherichia coli KO11FL sn-glycerol-3-phosphate transporter YP_006164618.1 2443677 D 595495 CDS YP_006164619.1 386700782 12762744 2445040..2446116 1 NC_017660.1 COG0584 Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase 2446116 glpQ 12762744 glpQ Escherichia coli KO11FL glycerophosphodiester phosphodiesterase YP_006164619.1 2445040 D 595495 CDS YP_006164620.1 386700783 12762745 2446578..2447228 1 NC_017660.1 inaA; hypothetical protein 2447228 12762745 KO11_11480 Escherichia coli KO11FL hypothetical protein YP_006164620.1 2446578 D 595495 CDS YP_006164621.1 386700784 12762746 complement(2447282..2447536) 1 NC_017660.1 COG0633 Ferredoxin; 2Fe-2S ferredoxin 2447536 yfaE 12762746 yfaE Escherichia coli KO11FL 2Fe-2S ferredoxin YP_006164621.1 2447282 R 595495 CDS YP_006164622.1 386700785 12762747 complement(2447536..2448705) 1 NC_017660.1 COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 2448705 nrdB 12762747 nrdB Escherichia coli KO11FL ribonucleotide-diphosphate reductase subunit beta YP_006164622.1 2447536 R 595495 CDS YP_006164623.1 386700786 12762748 complement(2448813..2451098) 1 NC_017660.1 COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha 2451098 nrdA 12762748 nrdA Escherichia coli KO11FL ribonucleotide-diphosphate reductase subunit alpha YP_006164623.1 2448813 R 595495 CDS YP_006164624.1 386700787 12762749 2451842..2455528 1 NC_017660.1 COG3468 Type V secretory pathway, adhesin AidA; adhesin 2455528 yfaL 12762749 yfaL Escherichia coli KO11FL adhesin YP_006164624.1 2451842 D 595495 CDS YP_006164625.1 386700788 12762750 complement(2455656..2456378) 1 NC_017660.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase 2456378 ubiG 12762750 ubiG Escherichia coli KO11FL bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase YP_006164625.1 2455656 R 595495 CDS YP_006164626.1 386700789 12762751 2456525..2459152 1 NC_017660.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 2459152 gyrA 12762751 gyrA Escherichia coli KO11FL DNA gyrase subunit A YP_006164626.1 2456525 D 595495 CDS YP_006164627.1 386700790 12762752 2459301..2460989 1 NC_017660.1 COG4685 Uncharacterized protein conserved in bacteria; yfaA; hypothetical protein 2460989 12762752 KO11_11515 Escherichia coli KO11FL hypothetical protein YP_006164627.1 2459301 D 595495 CDS YP_006164628.1 386700791 12762753 2460986..2461609 1 NC_017660.1 COG3234 Uncharacterized protein conserved in bacteria; yfaT; hypothetical protein 2461609 12762753 KO11_11520 Escherichia coli KO11FL hypothetical protein YP_006164628.1 2460986 D 595495 CDS YP_006164629.1 386700792 12762754 2461543..2466147 1 NC_017660.1 COG2373 Large extracellular alpha-helical protein; alpha-2-macroglobulin family protein 2466147 yfaS 12762754 yfaS Escherichia coli KO11FL alpha-2-macroglobulin family protein YP_006164629.1 2461543 D 595495 CDS YP_006164630.1 386700793 12762755 2466148..2467797 1 NC_017660.1 COG5445 Predicted secreted protein; yfaQ; hypothetical protein 2467797 12762755 KO11_11530 Escherichia coli KO11FL hypothetical protein YP_006164630.1 2466148 D 595495 CDS YP_006164631.1 386700794 12762756 2467802..2468578 1 NC_017660.1 COG4676 Uncharacterized protein conserved in bacteria; yfaP; hypothetical protein 2468578 12762756 KO11_11535 Escherichia coli KO11FL hypothetical protein YP_006164631.1 2467802 D 595495 CDS YP_006164632.1 386700795 12762757 2468853..2471702 1 NC_017660.1 COG0642 Signal transduction histidine kinase; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2471702 rcsC 12762757 rcsC Escherichia coli KO11FL hybrid sensory kinase in two-component regulatory system with RcsB and YojN YP_006164632.1 2468853 D 595495 CDS YP_006164633.1 386700796 12762758 complement(2471902..2472552) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator RcsB 2472552 rcsB 12762758 rcsB Escherichia coli KO11FL transcriptional regulator RcsB YP_006164633.1 2471902 R 595495 CDS YP_006164634.1 386700797 12762759 complement(2472569..2475241) 1 NC_017660.1 COG0642 Signal transduction histidine kinase; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2475241 rcsD 12762759 rcsD Escherichia coli KO11FL phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_006164634.1 2472569 R 595495 CDS YP_006164635.1 386700798 12762760 2475980..2477083 1 NC_017660.1 COG3203 Outer membrane protein (porin); outer membrane porin protein C 2477083 ompC 12762760 ompC Escherichia coli KO11FL outer membrane porin protein C YP_006164635.1 2475980 D 595495 CDS YP_006164636.1 386700799 12762761 2477195..2478250 1 NC_017660.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; thiamine biosynthesis lipoprotein ApbE 2478250 abpE 12762761 abpE Escherichia coli KO11FL thiamine biosynthesis lipoprotein ApbE YP_006164636.1 2477195 D 595495 CDS YP_006164637.1 386700800 12762762 2478324..2479388 1 NC_017660.1 COG2169 Adenosine deaminase; bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase 2479388 ada 12762762 ada Escherichia coli KO11FL bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase YP_006164637.1 2478324 D 595495 CDS YP_006164638.1 386700801 12762763 2479388..2480038 1 NC_017660.1 COG3145 Alkylated DNA repair protein; alpha-ketoglutarate-dependent dioxygenase AlkB 2480038 alkB 12762763 alkB Escherichia coli KO11FL alpha-ketoglutarate-dependent dioxygenase AlkB YP_006164638.1 2479388 D 595495 CDS YP_006164639.1 386700802 12762764 2480114..2481757 1 NC_017660.1 COG4615 ABC-type siderophore export system, fused ATPase and permease components; multidrug transporter membrane protein/ATP-binding component 2481757 yojI 12762764 yojI Escherichia coli KO11FL multidrug transporter membrane protein/ATP-binding component YP_006164639.1 2480114 D 595495 CDS YP_006164640.1 386700803 12762765 2481975..2483621 1 NC_017660.1 COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase 2483621 mqo 12762765 mqo Escherichia coli KO11FL malate:quinone oxidoreductase YP_006164640.1 2481975 D 595495 CDS YP_006164641.1 386700804 12762766 complement(2483770..2484258) 1 NC_017660.1 COG4574 Serine protease inhibitor ecotin; ecotin 2484258 eco 12762766 eco Escherichia coli KO11FL ecotin YP_006164641.1 2483770 R 595495 CDS YP_006164642.1 386700805 12762767 complement(2484343..2484558) 1 NC_017660.1 yojO; hypothetical protein 2484558 12762767 KO11_11587 Escherichia coli KO11FL hypothetical protein YP_006164642.1 2484343 R 595495 CDS YP_006164643.1 386700806 12762768 2484667..2485161 1 NC_017660.1 COG1145 Ferredoxin; ferredoxin-type protein 2485161 napF 12762768 napF Escherichia coli KO11FL ferredoxin-type protein YP_006164643.1 2484667 D 595495 CDS YP_006164644.1 386700807 12762769 2485151..2485414 1 NC_017660.1 COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase; assembly protein for periplasmic nitrate reductase 2485414 napD 12762769 napD Escherichia coli KO11FL assembly protein for periplasmic nitrate reductase YP_006164644.1 2485151 D 595495 CDS YP_006164645.1 386700808 12762770 2485411..2487897 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; nitrate reductase catalytic subunit 2487897 napA 12762770 napA Escherichia coli KO11FL nitrate reductase catalytic subunit YP_006164645.1 2485411 D 595495 CDS YP_006164646.1 386700809 12762771 2487904..2488599 1 NC_017660.1 COG1145 Ferredoxin; quinol dehydrogenase periplasmic component 2488599 napG 12762771 napG Escherichia coli KO11FL quinol dehydrogenase periplasmic component YP_006164646.1 2487904 D 595495 CDS YP_006164647.1 386700810 12762772 2488586..2489449 1 NC_017660.1 COG0348 Polyferredoxin; quinol dehydrogenase membrane component 2489449 napH 12762772 napH Escherichia coli KO11FL quinol dehydrogenase membrane component YP_006164647.1 2488586 D 595495 CDS YP_006164648.1 386700811 12762773 2489446..2489895 1 NC_017660.1 COG3043 Nitrate reductase cytochrome c-type subunit; nitrate reductase cytochrome C550 subunit 2489895 napB 12762773 napB Escherichia coli KO11FL nitrate reductase cytochrome C550 subunit YP_006164648.1 2489446 D 595495 CDS YP_006164649.1 386700812 12762774 2489905..2490507 1 NC_017660.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; cytochrome c-type protein NapC 2490507 napC 12762774 napC Escherichia coli KO11FL cytochrome c-type protein NapC YP_006164649.1 2489905 D 595495 CDS YP_006164650.1 386700813 12762775 2490526..2491143 1 NC_017660.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component; cytochrome c biogenesis protein CcmA 2491143 ccmA 12762775 ccmA Escherichia coli KO11FL cytochrome c biogenesis protein CcmA YP_006164650.1 2490526 D 595495 CDS YP_006164651.1 386700814 12762776 2491140..2491802 1 NC_017660.1 COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component; Heme exporter protein B 2491802 ccmB 12762776 ccmB Escherichia coli KO11FL Heme exporter protein B YP_006164651.1 2491140 D 595495 CDS YP_006164652.1 386700815 12762777 2491844..2492581 1 NC_017660.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme exporter protein C 2492581 ccmC 12762777 ccmC Escherichia coli KO11FL heme exporter protein C YP_006164652.1 2491844 D 595495 CDS YP_006164653.1 386700816 12762778 2492578..2492787 1 NC_017660.1 COG3114 Heme exporter protein D; cytochrome c biogenesis protein CcmD 2492787 ccmD 12762778 ccmD Escherichia coli KO11FL cytochrome c biogenesis protein CcmD YP_006164653.1 2492578 D 595495 CDS YP_006164654.1 386700817 12762779 2492784..2493263 1 NC_017660.1 COG2332 Cytochrome c-type biogenesis protein CcmE; cytochrome c-type biogenesis protein CcmE 2493263 ccmE 12762779 ccmE Escherichia coli KO11FL cytochrome c-type biogenesis protein CcmE YP_006164654.1 2492784 D 595495 CDS YP_006164655.1 386700818 12762780 2493260..2495203 1 NC_017660.1 COG1138 Cytochrome c biogenesis factor; heme lyase, CcmF subunit 2495203 ccmF 12762780 ccmF Escherichia coli KO11FL heme lyase, CcmF subunit YP_006164655.1 2493260 D 595495 CDS YP_006164656.1 386700819 12762781 2495200..2495757 1 NC_017660.1 COG0526 Thiol-disulfide isomerase and thioredoxins; thiol:disulfide interchange protein DsbE 2495757 ccmG 12762781 ccmG Escherichia coli KO11FL thiol:disulfide interchange protein DsbE YP_006164656.1 2495200 D 595495 CDS YP_006164657.1 386700820 12762782 2495754..2496806 1 NC_017660.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; heme lyase, CcmH subunit 2496806 ccmH 12762782 ccmH Escherichia coli KO11FL heme lyase, CcmH subunit YP_006164657.1 2495754 D 595495 CDS YP_006164658.1 386700821 12762783 complement(2496841..2497488) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator NarP 2497488 narP 12762783 narP Escherichia coli KO11FL transcriptional regulator NarP YP_006164658.1 2496841 R 595495 CDS YP_006164659.1 386700822 12762784 2497889..2500174 1 NC_017660.1 COG3468 Type V secretory pathway, adhesin AidA; putative autotransporter 2500174 yejO 12762784 yejO Escherichia coli KO11FL putative autotransporter YP_006164659.1 2497889 D 595495 CDS YP_006164660.1 386700823 12762785 2500187..2500399 1 NC_017660.1 putative autotransporter outer membrane protein 2500399 12762785 KO11_11675 Escherichia coli KO11FL putative autotransporter outer membrane protein YP_006164660.1 2500187 D 595495 CDS YP_006164661.1 386700824 12762786 2500363..2500524 1 NC_017660.1 hypothetical protein 2500524 12762786 KO11_11680 Escherichia coli KO11FL hypothetical protein YP_006164661.1 2500363 D 595495 CDS YP_006164662.1 386700825 12762788 complement(2500654..2502414) 1 NC_017660.1 COG3083 Predicted hydrolase of alkaline phosphatase superfamily; putative hydrolase, inner membrane 2502414 yejM 12762788 yejM Escherichia coli KO11FL putative hydrolase, inner membrane YP_006164662.1 2500654 R 595495 CDS YP_006164663.1 386700826 12762789 complement(2502434..2502661) 1 NC_017660.1 COG3082 Uncharacterized protein conserved in bacteria; yejL; hypothetical protein 2502661 12762789 KO11_11690 Escherichia coli KO11FL hypothetical protein YP_006164663.1 2502434 R 595495 CDS YP_006164664.1 386700827 12762790 2502843..2503850 1 NC_017660.1 COG3081 Nucleoid-associated protein; nucleoid-associated protein NdpA 2503850 yejK 12762790 yejK Escherichia coli KO11FL nucleoid-associated protein NdpA YP_006164664.1 2502843 D 595495 CDS YP_006164665.1 386700828 12762791 complement(2503989..2504273) 1 NC_017660.1 COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25 2504273 rplY 12762791 rplY Escherichia coli KO11FL 50S ribosomal protein L25 YP_006164665.1 2503989 R 595495 CDS YP_006164666.1 386700829 12762792 complement(2504398..2506158) 1 NC_017660.1 COG1061 DNA or RNA helicases of superfamily II; putative ATP-dependent helicase 2506158 yejH 12762792 yejH Escherichia coli KO11FL putative ATP-dependent helicase YP_006164666.1 2504398 R 595495 CDS YP_006164667.1 386700830 12762793 2506307..2507002 1 NC_017660.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 16S rRNA pseudouridylate synthase A 2507002 rsuA 12762793 rsuA Escherichia coli KO11FL 16S rRNA pseudouridylate synthase A YP_006164667.1 2506307 D 595495 CDS YP_006164668.1 386700831 12762794 2507030..2508220 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; bicyclomycin/multidrug efflux system protein 2508220 bcr 12762794 bcr Escherichia coli KO11FL bicyclomycin/multidrug efflux system protein YP_006164668.1 2507030 D 595495 CDS YP_006164669.1 386700832 12762795 2508553..2508897 1 NC_017660.1 yejG; hypothetical protein 2508897 12762795 KO11_11720 Escherichia coli KO11FL hypothetical protein YP_006164669.1 2508553 D 595495 CDS YP_006164670.1 386700833 12762796 complement(2508901..2510490) 1 NC_017660.1 COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; microcin C ABC transporter ATP-binding protein YejF 2510490 yejF 12762796 yejF Escherichia coli KO11FL microcin C ABC transporter ATP-binding protein YejF YP_006164670.1 2508901 R 595495 CDS YP_006164671.1 386700834 12762797 complement(2510492..2511517) 1 NC_017660.1 COG4239 ABC-type uncharacterized transport system, permease component; microcin C ABC transporter permease 2511517 yejE 12762797 yejE Escherichia coli KO11FL microcin C ABC transporter permease YP_006164671.1 2510492 R 595495 CDS YP_006164672.1 386700835 12762798 complement(2511517..2512611) 1 NC_017660.1 COG4174 ABC-type uncharacterized transport system, permease component; microcin C ABC transporter permease YejB 2512611 yejB 12762798 yejB Escherichia coli KO11FL microcin C ABC transporter permease YejB YP_006164672.1 2511517 R 595495 CDS YP_006164673.1 386700836 12762799 complement(2512612..2514426) 1 NC_017660.1 COG4166 ABC-type oligopeptide transport system, periplasmic component; putative oligopeptide transporter subunit, periplasmic-binding component of ABC superfamily transporter 2514426 yejA 12762799 yejA Escherichia coli KO11FL putative oligopeptide transporter subunit, periplasmic-binding component of ABC superfamily transporter YP_006164673.1 2512612 R 595495 CDS YP_006164674.1 386700837 12762800 complement(2514508..2516064) 1 NC_017660.1 COG2200 FOG: EAL domain; phage resistance protein 2516064 rtn 12762800 rtn Escherichia coli KO11FL phage resistance protein YP_006164674.1 2514508 R 595495 CDS YP_006164675.1 386700838 12762801 complement(2516245..2516811) 1 NC_017660.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins); outer membrane lipoprotein 2516811 spr 12762801 spr Escherichia coli KO11FL outer membrane lipoprotein YP_006164675.1 2516245 R 595495 CDS YP_006164676.1 386700839 12762802 complement(2517223..2517936) 1 NC_017660.1 COG0671 Membrane-associated phospholipid phosphatase; undecaprenyl pyrophosphate phosphatase 2517936 lpxT 12762802 lpxT Escherichia coli KO11FL undecaprenyl pyrophosphate phosphatase YP_006164676.1 2517223 R 595495 CDS YP_006164677.1 386700840 12762803 complement(2517975..2518961) 1 NC_017660.1 COG0523 Putative GTPases (G3E family); hypothetical protein 2518961 yeiR 12762803 yeiR Escherichia coli KO11FL hypothetical protein YP_006164677.1 2517975 R 595495 CDS YP_006164678.1 386700841 12762804 complement(2519079..2520545) 1 NC_017660.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases; putative sugar dehydrogenase, NAD-dependent 2520545 yeiQ 12762804 yeiQ Escherichia coli KO11FL putative sugar dehydrogenase, NAD-dependent YP_006164678.1 2519079 R 595495 CDS YP_006164679.1 386700842 12762805 complement(2520768..2521340) 1 NC_017660.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 2521340 yeiP 12762805 yeiP Escherichia coli KO11FL elongation factor P YP_006164679.1 2520768 R 595495 CDS YP_006164680.1 386700843 12762806 2521495..2521749 1 NC_017660.1 COG0727 Predicted Fe-S-cluster oxidoreductase; yeiW; hypothetical protein 2521749 12762806 KO11_11775 Escherichia coli KO11FL hypothetical protein YP_006164680.1 2521495 D 595495 CDS YP_006164681.1 386700844 12762807 complement(2521746..2522927) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; sugar efflux transporter B 2522927 setB 12762807 setB Escherichia coli KO11FL sugar efflux transporter B YP_006164681.1 2521746 R 595495 CDS YP_006164682.1 386700845 12762808 2523295..2524425 1 NC_017660.1 COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 2524425 fruB 12762808 fruB Escherichia coli KO11FL bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein YP_006164682.1 2523295 D 595495 CDS YP_006164683.1 386700846 12762809 2524425..2525363 1 NC_017660.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); 1-phosphofructokinase 2525363 fruK 12762809 fruK Escherichia coli KO11FL 1-phosphofructokinase YP_006164683.1 2524425 D 595495 CDS YP_006164684.1 386700847 12762810 2525380..2527071 1 NC_017660.1 COG3925 N-terminal domain of the phosphotransferase system fructose-specific component IIB; PTS system fructose-specific transporter subunit IIBC 2527071 fruA 12762810 fruA Escherichia coli KO11FL PTS system fructose-specific transporter subunit IIBC YP_006164684.1 2525380 D 595495 CDS YP_006164685.1 386700848 12762811 2527495..2528436 1 NC_017660.1 COG0524 Sugar kinases, ribokinase family; pseudouridine kinase 2528436 psuK 12762811 psuK Escherichia coli KO11FL pseudouridine kinase YP_006164685.1 2527495 D 595495 CDS YP_006164686.1 386700849 12762812 2528424..2529362 1 NC_017660.1 COG2313 Uncharacterized enzyme involved in pigment biosynthesis; psuG; hypothetical protein 2529362 12762812 KO11_11805 Escherichia coli KO11FL hypothetical protein YP_006164686.1 2528424 D 595495 CDS YP_006164687.1 386700850 12762813 2529456..2530706 1 NC_017660.1 COG1972 Nucleoside permease; putative nucleoside transporter 2530706 psuT 12762813 psuT Escherichia coli KO11FL putative nucleoside transporter YP_006164687.1 2529456 D 595495 CDS YP_006164688.1 386700851 12762814 complement(2530774..2531472) 1 NC_017660.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; DNA-binding transcriptional activator YeiL 2531472 yeiL 12762814 yeiL Escherichia coli KO11FL DNA-binding transcriptional activator YeiL YP_006164688.1 2530774 R 595495 CDS YP_006164689.1 386700852 12762815 2531602..2532543 1 NC_017660.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase; ribonucleoside hydrolase 2 2532543 rihB 12762815 rihB Escherichia coli KO11FL ribonucleoside hydrolase 2 YP_006164689.1 2531602 D 595495 CDS YP_006164690.1 386700853 12762816 2532643..2533893 1 NC_017660.1 COG1972 Nucleoside permease; putative transport system permease 2533893 nupX 12762816 nupX Escherichia coli KO11FL putative transport system permease YP_006164690.1 2532643 D 595495 CDS YP_006164691.1 386700854 12762817 complement(2533949..2535037) 1 NC_017660.1 COG2771 DNA-binding HTH domain-containing proteins; putative kinase 2535037 yeiI 12762817 yeiI Escherichia coli KO11FL putative kinase YP_006164691.1 2533949 R 595495 CDS YP_006164692.1 386700855 12762818 complement(2535040..2535897) 1 NC_017660.1 COG0648 Endonuclease IV; endonuclease IV 2535897 nfo 12762818 nfo Escherichia coli KO11FL endonuclease IV YP_006164692.1 2535040 R 595495 CDS YP_006164693.1 386700856 12762819 complement(2535971..2537020) 1 NC_017660.1 COG2855 Predicted membrane protein; yeiH; hypothetical protein 2537020 12762819 KO11_11840 Escherichia coli KO11FL hypothetical protein YP_006164693.1 2535971 R 595495 CDS YP_006164694.1 386700857 12762820 2537119..2538000 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 2538000 yeiE 12762820 yeiE Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006164694.1 2537119 D 595495 CDS YP_006164695.1 386700858 12762821 2538205..2539674 1 NC_017660.1 COG0833 Amino acid transporters; lysine transporter 2539674 lysP 12762821 lysP Escherichia coli KO11FL lysine transporter YP_006164695.1 2538205 D 595495 CDS YP_006164696.1 386700859 12762822 2539967..2541958 1 NC_017660.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins; catecholate siderophore receptor CirA 2541958 cirA 12762822 cirA Escherichia coli KO11FL catecholate siderophore receptor CirA YP_006164696.1 2539967 D 595495 CDS YP_006164697.1 386700860 12762823 complement(2541990..2542826) 1 NC_017660.1 COG0627 Predicted esterase; putative esterase 2542826 yeiG 12762823 yeiG Escherichia coli KO11FL putative esterase YP_006164697.1 2541990 R 595495 CDS YP_006164698.1 386700861 12762824 2543084..2543752 1 NC_017660.1 COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 2543752 folE 12762824 folE Escherichia coli KO11FL GTP cyclohydrolase I YP_006164698.1 2543084 D 595495 CDS YP_006164699.1 386700862 12762825 2543769..2544926 1 NC_017660.1 COG2311 Predicted membrane protein; yeiB; hypothetical protein 2544926 12762825 KO11_11870 Escherichia coli KO11FL hypothetical protein YP_006164699.1 2543769 D 595495 CDS YP_006164700.1 386700863 12762826 2545068..2546108 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional regulator GalS 2546108 galS 12762826 galS Escherichia coli KO11FL DNA-binding transcriptional regulator GalS YP_006164700.1 2545068 D 595495 CDS YP_006164701.1 386700864 12762827 2546388..2547386 1 NC_017660.1 COG1879 ABC-type sugar transport system, periplasmic component; methyl-galactoside ABC transporter substrate-binding protein MglB 2547386 mglB 12762827 mglB Escherichia coli KO11FL methyl-galactoside ABC transporter substrate-binding protein MglB YP_006164701.1 2546388 D 595495 CDS YP_006164702.1 386700865 12762828 2547447..2548967 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; galactose/methyl galaxtoside transporter ATP-binding protein 2548967 mglA 12762828 mglA Escherichia coli KO11FL galactose/methyl galaxtoside transporter ATP-binding protein YP_006164702.1 2547447 D 595495 CDS YP_006164703.1 386700866 12762829 2548983..2549993 1 NC_017660.1 COG4211 ABC-type glucose/galactose transport system, permease component; beta-methylgalactoside transporter inner membrane protein 2549993 mglC 12762829 mglC Escherichia coli KO11FL beta-methylgalactoside transporter inner membrane protein YP_006164703.1 2548983 D 595495 CDS YP_006164704.1 386700867 12762830 complement(2550064..2551299) 1 NC_017660.1 COG0167 Dihydroorotate dehydrogenase; dihydropyrimidine dehydrogenase subunit B 2551299 yeiA 12762830 yeiA Escherichia coli KO11FL dihydropyrimidine dehydrogenase subunit B YP_006164704.1 2550064 R 595495 CDS YP_006164705.1 386700868 12762831 complement(2551293..2552531) 1 NC_017660.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; dihydropyrimidine dehydrogenase subunit A 2552531 yeiT 12762831 yeiT Escherichia coli KO11FL dihydropyrimidine dehydrogenase subunit A YP_006164705.1 2551293 R 595495 CDS YP_006164706.1 386700869 12762832 complement(2552850..2553089) 1 NC_017660.1 yeiS; hypothetical protein 2553089 12762832 KO11_11905 Escherichia coli KO11FL hypothetical protein YP_006164706.1 2552850 R 595495 CDS YP_006164707.1 386700870 12762833 complement(2553092..2553811) 1 NC_017660.1 COG2949 Uncharacterized membrane protein; vancomycin high temperature exclusion protein 2553811 sanA 12762833 sanA Escherichia coli KO11FL vancomycin high temperature exclusion protein YP_006164707.1 2553092 R 595495 CDS YP_006164708.1 386700871 12762834 complement(2553961..2554845) 1 NC_017660.1 COG0295 Cytidine deaminase; cytidine deaminase 2554845 cdd 12762834 cdd Escherichia coli KO11FL cytidine deaminase YP_006164708.1 2553961 R 595495 CDS YP_006164709.1 386700872 12762835 complement(2554975..2555670) 1 NC_017660.1 COG1346 Putative effector of murein hydrolase; yohK; hypothetical protein 2555670 12762835 KO11_11920 Escherichia coli KO11FL hypothetical protein YP_006164709.1 2554975 R 595495 CDS YP_006164710.1 386700873 12762836 complement(2555667..2556065) 1 NC_017660.1 COG1380 Putative effector of murein hydrolase LrgA; yohJ; hypothetical protein 2556065 12762836 KO11_11925 Escherichia coli KO11FL hypothetical protein YP_006164710.1 2555667 R 595495 CDS YP_006164711.1 386700874 12762837 2556304..2557254 1 NC_017660.1 COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase C 2557254 dusC 12762837 dusC Escherichia coli KO11FL tRNA-dihydrouridine synthase C YP_006164711.1 2556304 D 595495 CDS YP_006164712.1 386700875 12762838 2558297..2559385 1 NC_017660.1 COG1538 Outer membrane protein; multidrug resistance outer membrane protein MdtQ 2559385 mdtQ 12762838 mdtQ Escherichia coli KO11FL multidrug resistance outer membrane protein MdtQ YP_006164712.1 2558297 D 595495 CDS YP_006164713.1 386700876 12762839 2559438..2560199 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 2560199 yohF 12762839 yohF Escherichia coli KO11FL oxidoreductase YP_006164713.1 2559438 D 595495 CDS YP_006164714.1 386700877 12762840 complement(2560329..2560907) 1 NC_017660.1 COG0586 Uncharacterized membrane-associated protein; inner membrane protein 2560907 yohD 12762840 yohD Escherichia coli KO11FL inner membrane protein YP_006164714.1 2560329 R 595495 CDS YP_006164715.1 386700878 12762841 2561077..2561664 1 NC_017660.1 inner membrane protein YohC 2561664 yohC 12762841 yohC Escherichia coli KO11FL inner membrane protein YohC YP_006164715.1 2561077 D 595495 CDS YP_006164716.1 386700879 12762842 2561838..2562770 1 NC_017660.1 COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine endopeptidase 2562770 pbpG 12762842 pbpG Escherichia coli KO11FL D-alanyl-D-alanine endopeptidase YP_006164716.1 2561838 D 595495 CDS YP_006164717.1 386700880 12762843 complement(2562808..2564523) 1 NC_017660.1 COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase 2564523 dld 12762843 dld Escherichia coli KO11FL D-lactate dehydrogenase YP_006164717.1 2562808 R 595495 CDS YP_006164718.1 386700881 12762844 2564719..2567016 1 NC_017660.1 COG1472 Beta-glucosidase-related glycosidases; beta-D-glucoside glucohydrolase 2567016 bglX 12762844 bglX Escherichia coli KO11FL beta-D-glucoside glucohydrolase YP_006164718.1 2564719 D 595495 CDS YP_006164719.1 386700882 12762845 2567227..2568144 1 NC_017660.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); putative transporter subunit: periplasmic-binding component of ABC superfamily protein 2568144 osmF 12762845 osmF Escherichia coli KO11FL putative transporter subunit: periplasmic-binding component of ABC superfamily protein YP_006164719.1 2567227 D 595495 CDS YP_006164720.1 386700883 12762846 2568151..2569308 1 NC_017660.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component; putative transporter subunit: permease component of ABC superfamily protein 2569308 yehY 12762846 yehY Escherichia coli KO11FL putative transporter subunit: permease component of ABC superfamily protein YP_006164720.1 2568151 D 595495 CDS YP_006164721.1 386700884 12762847 2569301..2570227 1 NC_017660.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; putative transporter subunit: ATP-binding component of ABC superfamily transporter 2570227 yehX 12762847 yehX Escherichia coli KO11FL putative transporter subunit: ATP-binding component of ABC superfamily transporter YP_006164721.1 2569301 D 595495 CDS YP_006164722.1 386700885 12762848 2570232..2570963 1 NC_017660.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component; ABC transporter quaternary amine uptake (QAT) family, permease protein 2570963 yehW 12762848 yehW Escherichia coli KO11FL ABC transporter quaternary amine uptake (QAT) family, permease protein YP_006164722.1 2570232 D 595495 CDS YP_006164723.1 386700886 12762849 complement(2570944..2571051) 1 NC_017660.1 yohO; hypothetical protein 2571051 12762849 KO11_11990 Escherichia coli KO11FL hypothetical protein YP_006164723.1 2570944 R 595495 CDS YP_006164724.1 386700887 12762850 complement(2571111..2571842) 1 NC_017660.1 COG0789 Predicted transcriptional regulators; transcriptional regulator MlrA 2571842 mlrA 12762850 mlrA Escherichia coli KO11FL transcriptional regulator MlrA YP_006164724.1 2571111 R 595495 CDS YP_006164725.1 386700888 12762851 2572064..2573749 1 NC_017660.1 COG3275 Putative regulator of cell autolysis; putative sensory kinase in two-component system with YehT 2573749 yehU 12762851 yehU Escherichia coli KO11FL putative sensory kinase in two-component system with YehT YP_006164725.1 2572064 D 595495 CDS YP_006164726.1 386700889 12762852 2573746..2574465 1 NC_017660.1 COG3279 Response regulator of the LytR/AlgR family; putative two-component response-regulatory protein YehT 2574465 yehT 12762852 yehT Escherichia coli KO11FL putative two-component response-regulatory protein YehT YP_006164726.1 2573746 D 595495 CDS YP_006164727.1 386700890 12762853 2574512..2574982 1 NC_017660.1 COG4807 Uncharacterized protein conserved in bacteria; yehS; hypothetical protein 2574982 12762853 KO11_12010 Escherichia coli KO11FL hypothetical protein YP_006164727.1 2574512 D 595495 CDS YP_006164728.1 386700891 12762854 complement(2575022..2575483) 1 NC_017660.1 COG4808 Uncharacterized protein conserved in bacteria; yehR; hypothetical protein 2575483 12762854 KO11_12015 Escherichia coli KO11FL hypothetical protein YP_006164728.1 2575022 R 595495 CDS YP_006164729.1 386700892 12762855 complement(2575608..2577608) 1 NC_017660.1 yehQ; hypothetical protein 2577608 12762855 KO11_12020 Escherichia coli KO11FL hypothetical protein YP_006164729.1 2575608 R 595495 CDS YP_006164730.1 386700893 12762856 complement(2577605..2578741) 1 NC_017660.1 yehP; hypothetical protein 2578741 12762856 KO11_12025 Escherichia coli KO11FL hypothetical protein YP_006164730.1 2577605 R 595495 CDS YP_006164731.1 386700894 12762857 complement(2578734..2581013) 1 NC_017660.1 yehM; hypothetical protein 2581013 12762857 KO11_12030 Escherichia coli KO11FL hypothetical protein YP_006164731.1 2578734 R 595495 CDS YP_006164732.1 386700895 12762858 complement(2581024..2582112) 1 NC_017660.1 COG0714 MoxR-like ATPases; putative transporter subunit 2582112 yehL 12762858 yehL Escherichia coli KO11FL putative transporter subunit YP_006164732.1 2581024 R 595495 CDS YP_006164733.1 386700896 12762859 complement(2583295..2583615) 1 NC_017660.1 yehK; hypothetical protein 2583615 12762859 KO11_12037 Escherichia coli KO11FL hypothetical protein YP_006164733.1 2583295 R 595495 CDS YP_006164734.1 386700897 12762860 complement(2583676..2587308) 1 NC_017660.1 yehI; hypothetical protein 2587308 12762860 KO11_12040 Escherichia coli KO11FL hypothetical protein YP_006164734.1 2583676 R 595495 CDS YP_006164735.1 386700898 12762861 complement(2587318..2591112) 1 NC_017660.1 COG3831 Uncharacterized conserved protein; yehH; hypothetical protein 2591112 12762861 KO11_12045 Escherichia coli KO11FL hypothetical protein YP_006164735.1 2587318 R 595495 CDS YP_006164736.1 386700899 12762862 complement(2591253..2593286) 1 NC_017660.1 COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase 2593286 metG 12762862 metG Escherichia coli KO11FL methionyl-tRNA synthetase YP_006164736.1 2591253 R 595495 CDS YP_006164737.1 386700900 12762863 2593418..2594527 1 NC_017660.1 COG0489 ATPases involved in chromosome partitioning; antiporter inner membrane protein 2594527 mrp 12762863 mrp Escherichia coli KO11FL antiporter inner membrane protein YP_006164737.1 2593418 D 595495 CDS YP_006164738.1 386700901 12762864 2594790..2595071 1 NC_017660.1 yehE; hypothetical protein 2595071 12762864 KO11_12060 Escherichia coli KO11FL hypothetical protein YP_006164738.1 2594790 D 595495 CDS YP_006164739.1 386700902 12762865 2595364..2595906 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like protein 2595906 yehD 12762865 yehD Escherichia coli KO11FL putative fimbrial-like protein YP_006164739.1 2595364 D 595495 CDS YP_006164740.1 386700903 12762866 2595987..2596661 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; putative chaperone 2596661 yehC 12762866 yehC Escherichia coli KO11FL putative chaperone YP_006164740.1 2595987 D 595495 CDS YP_006164741.1 386700904 12762867 2596677..2599157 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein 2599157 yehB 12762867 yehB Escherichia coli KO11FL fimbrial outer membrane usher protein YP_006164741.1 2596677 D 595495 CDS YP_006164742.1 386700905 12762868 2599173..2600207 1 NC_017660.1 putative fimbrial-like adhesin protein StcD 2600207 yehA 12762868 yehA Escherichia coli KO11FL putative fimbrial-like adhesin protein StcD YP_006164742.1 2599173 D 595495 CDS YP_006164743.1 386700906 12762869 complement(2600289..2600627) 1 NC_017660.1 COG5455 Predicted integral membrane protein; yohN; hypothetical protein 2600627 12762869 KO11_12085 Escherichia coli KO11FL hypothetical protein YP_006164743.1 2600289 R 595495 CDS YP_006164744.1 386700907 12762870 complement(2600846..2601670) 1 NC_017660.1 COG2215 ABC-type uncharacterized transport system, permease component; nickel/cobalt efflux protein RcnA 2601670 rcnA 12762870 rcnA Escherichia coli KO11FL nickel/cobalt efflux protein RcnA YP_006164744.1 2600846 R 595495 CDS YP_006164745.1 386700908 12762871 2601791..2602063 1 NC_017660.1 COG1937 Uncharacterized protein conserved in bacteria; transcriptional repressor RcnR to maintain nickel and cobalt homeostasis 2602063 rcnR 12762871 rcnR Escherichia coli KO11FL transcriptional repressor RcnR to maintain nickel and cobalt homeostasis YP_006164745.1 2601791 D 595495 CDS YP_006164746.1 386700909 12762872 2602286..2603074 1 NC_017660.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase 2603074 thiM 12762872 thiM Escherichia coli KO11FL hydroxyethylthiazole kinase YP_006164746.1 2602286 D 595495 CDS YP_006164747.1 386700910 12762873 2603071..2603871 1 NC_017660.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase 2603871 thiD 12762873 thiD Escherichia coli KO11FL bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase YP_006164747.1 2603071 D 595495 CDS YP_006164748.1 386700911 12762874 2603936..2604754 1 NC_017660.1 COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase); putative hydrolase 2604754 yegX 12762874 yegX Escherichia coli KO11FL putative hydrolase YP_006164748.1 2603936 D 595495 CDS YP_006164749.1 386700912 12762875 2604806..2605552 1 NC_017660.1 COG2188 Transcriptional regulators; GntR family transcriptional regulator 2605552 yegW 12762875 yegW Escherichia coli KO11FL GntR family transcriptional regulator YP_006164749.1 2604806 D 595495 CDS YP_006164750.1 386700913 12762876 complement(2605526..2606491) 1 NC_017660.1 COG0524 Sugar kinases, ribokinase family; putative kinase 2606491 yegV 12762876 yegV Escherichia coli KO11FL putative kinase YP_006164750.1 2605526 R 595495 CDS YP_006164751.1 386700914 12762877 complement(2606488..2607492) 1 NC_017660.1 COG1397 ADP-ribosylglycohydrolase; putative hydrolase 2607492 yegU 12762877 yegU Escherichia coli KO11FL putative hydrolase YP_006164751.1 2606488 R 595495 CDS YP_006164752.1 386700915 12762878 complement(2607489..2608766) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative nucleoside transporter 2608766 yegT 12762878 yegT Escherichia coli KO11FL putative nucleoside transporter YP_006164752.1 2607489 R 595495 CDS YP_006164753.1 386700916 12762879 2609023..2610075 1 NC_017660.1 COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; fructose-bisphosphate aldolase 2610075 fbaB 12762879 fbaB Escherichia coli KO11FL fructose-bisphosphate aldolase YP_006164753.1 2609023 D 595495 CDS YP_006164754.1 386700917 12762880 2610385..2611239 1 NC_017660.1 COG0191 Fructose/tagatose bisphosphate aldolase; tagatose-bisphosphate aldolase 2611239 gatY 12762880 gatY Escherichia coli KO11FL tagatose-bisphosphate aldolase YP_006164754.1 2610385 D 595495 CDS YP_006164755.1 386700918 12762881 2611268..2612530 1 NC_017660.1 COG4573 Predicted tagatose 6-phosphate kinase; D-tagatose-1,6-bisphosphate aldolase subunit GatZ 2612530 gatZ 12762881 gatZ Escherichia coli KO11FL D-tagatose-1,6-bisphosphate aldolase subunit GatZ YP_006164755.1 2611268 D 595495 CDS YP_006164756.1 386700919 12762882 2612540..2612992 1 NC_017660.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system galactitol-specific transporter subunit IIA 2612992 gatA 12762882 gatA Escherichia coli KO11FL PTS system galactitol-specific transporter subunit IIA YP_006164756.1 2612540 D 595495 CDS YP_006164757.1 386700920 12762883 2613023..2613307 1 NC_017660.1 COG3414 Phosphotransferase system, galactitol-specific IIB component; PTS system galactitol-specific transporter subunit IIB 2613307 gatB 12762883 gatB Escherichia coli KO11FL PTS system galactitol-specific transporter subunit IIB YP_006164757.1 2613023 D 595495 CDS YP_006164758.1 386700921 12762884 2613311..2614666 1 NC_017660.1 COG3775 Phosphotransferase system, galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 2614666 gatC 12762884 gatC Escherichia coli KO11FL PTS system galactitol-specific transporter subunit IIC YP_006164758.1 2613311 D 595495 CDS YP_006164759.1 386700922 12762885 2614714..2615754 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; galactitol-1-phosphate dehydrogenase 2615754 gatD 12762885 gatD Escherichia coli KO11FL galactitol-1-phosphate dehydrogenase YP_006164759.1 2614714 D 595495 CDS YP_006164760.1 386700923 12762886 2615860..2616633 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; Galactitol utilization operon repressor 2616633 gatR 12762886 gatR Escherichia coli KO11FL Galactitol utilization operon repressor YP_006164760.1 2615860 D 595495 CDS YP_006164761.1 386700924 12762887 complement(2616715..2617614) 1 NC_017660.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; lipid kinase 2617614 yegS 12762887 yegS Escherichia coli KO11FL lipid kinase YP_006164761.1 2616715 R 595495 CDS YP_006164762.1 386700925 12762888 2618020..2618337 1 NC_017660.1 yegR; hypothetical protein 2618337 12762888 KO11_12180 Escherichia coli KO11FL hypothetical protein YP_006164762.1 2618020 D 595495 CDS YP_006164763.1 386700926 12762889 complement(2618602..2619615) 1 NC_017660.1 COG0582 Integrase; integrase 2619615 int1 12762889 int1 Escherichia coli KO11FL integrase YP_006164763.1 2618602 R 595495 CDS YP_006164764.1 386700927 12762890 complement(2619731..2620030) 1 NC_017660.1 immunity repressor 2620030 gpC 12762890 gpC Escherichia coli KO11FL immunity repressor YP_006164764.1 2619731 R 595495 CDS YP_006164765.1 386700928 12762891 2620152..2620427 1 NC_017660.1 bacteriophage P2 Cox-like protein 2620427 12762891 KO11_12195 Escherichia coli KO11FL bacteriophage P2 Cox-like protein YP_006164765.1 2620152 D 595495 CDS YP_006164766.1 386700929 12762892 2620438..2620608 1 NC_017660.1 hypothetical protein 2620608 12762892 KO11_12200 Escherichia coli KO11FL hypothetical protein YP_006164766.1 2620438 D 595495 CDS YP_006164767.1 386700930 12762893 2620605..2621105 1 NC_017660.1 Replication gene B protein (GpB) 2621105 gpB 12762893 gpB Escherichia coli KO11FL Replication gene B protein (GpB) YP_006164767.1 2620605 D 595495 CDS YP_006164768.1 386700931 12762894 2621393..2621692 1 NC_017660.1 gp81; hypothetical protein 2621692 12762894 KO11_12210 Escherichia coli KO11FL hypothetical protein YP_006164768.1 2621393 D 595495 CDS YP_006164769.1 386700932 12762895 2621695..2621919 1 NC_017660.1 gp82; hypothetical protein 2621919 12762895 KO11_12215 Escherichia coli KO11FL hypothetical protein YP_006164769.1 2621695 D 595495 CDS YP_006164770.1 386700933 12762896 2621916..2622191 1 NC_017660.1 gp83; hypothetical protein 2622191 12762896 KO11_12220 Escherichia coli KO11FL hypothetical protein YP_006164770.1 2621916 D 595495 CDS YP_006164771.1 386700934 12762897 2622181..2624457 1 NC_017660.1 putative phage replication initiation protein 2624457 gpA 12762897 gpA Escherichia coli KO11FL putative phage replication initiation protein YP_006164771.1 2622181 D 595495 CDS YP_006164772.1 386700935 12762898 2625622..2627055 1 NC_017660.1 COG4938 Uncharacterized conserved protein; hypothetical protein 2627055 12762898 KO11_12230 Escherichia coli KO11FL hypothetical protein YP_006164772.1 2625622 D 595495 CDS YP_006164773.1 386700936 12762899 complement(2627679..2628707) 1 NC_017660.1 COG5518 Bacteriophage capsid portal protein; phage capsid protein 2628707 gpQ 12762899 gpQ Escherichia coli KO11FL phage capsid protein YP_006164773.1 2627679 R 595495 CDS YP_006164774.1 386700937 12762900 complement(2628707..2630479) 1 NC_017660.1 Terminase, ATPase subunit (GpP) 2630479 gpP_phage 12762900 gpP_phage Escherichia coli KO11FL Terminase, ATPase subunit (GpP) YP_006164774.1 2628707 R 595495 CDS YP_006164775.1 386700938 12762901 2630653..2631507 1 NC_017660.1 putative capsid scaffolding protein (GpO) from prophage P2 2631507 gpO 12762901 gpO Escherichia coli KO11FL putative capsid scaffolding protein (GpO) from prophage P2 YP_006164775.1 2630653 D 595495 CDS YP_006164776.1 386700939 12762902 2631566..2632639 1 NC_017660.1 putative major capsid protein 2632639 gpN 12762902 gpN Escherichia coli KO11FL putative major capsid protein YP_006164776.1 2631566 D 595495 CDS YP_006164777.1 386700940 12762903 2632643..2633386 1 NC_017660.1 small terminase subunit 2633386 gpM 12762903 gpM Escherichia coli KO11FL small terminase subunit YP_006164777.1 2632643 D 595495 CDS YP_006164778.1 386700941 12762904 2633489..2633995 1 NC_017660.1 Head completion/stabilization protein (GpL) 2633995 gpL 12762904 gpL Escherichia coli KO11FL Head completion/stabilization protein (GpL) YP_006164778.1 2633489 D 595495 CDS YP_006164779.1 386700942 12762905 2633995..2634198 1 NC_017660.1 COG5004 P2-like prophage tail protein X; Tail protein X (GpX) 2634198 gpX 12762905 gpX Escherichia coli KO11FL Tail protein X (GpX) YP_006164779.1 2633995 D 595495 CDS YP_006164780.1 386700943 12762906 2634202..2634483 1 NC_017660.1 gpY; hypothetical protein 2634483 12762906 KO11_12270 Escherichia coli KO11FL hypothetical protein YP_006164780.1 2634202 D 595495 CDS YP_006164781.1 386700944 12762907 2634483..2634980 1 NC_017660.1 COG4678 Muramidase (phage lambda lysozyme); phage lysozyme 2634980 gpK 12762907 gpK Escherichia coli KO11FL phage lysozyme YP_006164781.1 2634483 D 595495 CDS YP_006164782.1 386700945 12762908 2634995..2635420 1 NC_017660.1 phage lysis protein LysA 2635420 lysA-phage 12762908 lysA-phage Escherichia coli KO11FL phage lysis protein LysA YP_006164782.1 2634995 D 595495 CDS YP_006164783.1 386700946 12762909 2635408..2635833 1 NC_017660.1 putative Protein lysB from bacteriophage P2 2635833 lysB 12762909 lysB Escherichia coli KO11FL putative Protein lysB from bacteriophage P2 YP_006164783.1 2635408 D 595495 CDS YP_006164784.1 386700947 12762910 2635820..2635978 1 NC_017660.1 phage lysis protein LysC 2635978 lysC-phage 12762910 lysC-phage Escherichia coli KO11FL phage lysis protein LysC YP_006164784.1 2635820 D 595495 CDS YP_006164785.1 386700948 12762911 2635941..2636408 1 NC_017660.1 Tail completion protein R (GpR) 2636408 gpR 12762911 gpR Escherichia coli KO11FL Tail completion protein R (GpR) YP_006164785.1 2635941 D 595495 CDS YP_006164786.1 386700949 12762912 2636401..2636853 1 NC_017660.1 putative tail protein 2636853 gpS 12762912 gpS Escherichia coli KO11FL putative tail protein YP_006164786.1 2636401 D 595495 CDS YP_006164787.1 386700950 12762913 2636920..2637555 1 NC_017660.1 COG4540 Phage P2 baseplate assembly protein gpV; phage baseplate protein 2637555 gpV 12762913 gpV Escherichia coli KO11FL phage baseplate protein YP_006164787.1 2636920 D 595495 CDS YP_006164788.1 386700951 12762914 2637552..2637899 1 NC_017660.1 COG3628 Phage baseplate assembly protein W; Baseplate assembly protein W (GpW) 2637899 gpW 12762914 gpW Escherichia coli KO11FL Baseplate assembly protein W (GpW) YP_006164788.1 2637552 D 595495 CDS YP_006164789.1 386700952 12762915 2637904..2638812 1 NC_017660.1 COG3948 Phage-related baseplate assembly protein; baseplate assembly protein 2638812 gpJ 12762915 gpJ Escherichia coli KO11FL baseplate assembly protein YP_006164789.1 2637904 D 595495 CDS YP_006164790.1 386700953 12762916 2638805..2639416 1 NC_017660.1 COG4385 Bacteriophage P2-related tail formation protein; phage P2-related tail formation protein 2639416 gpI 12762916 gpI Escherichia coli KO11FL phage P2-related tail formation protein YP_006164790.1 2638805 D 595495 CDS YP_006164791.1 386700954 12762917 2639413..2640696 1 NC_017660.1 COG5301 Phage-related tail fibre protein; phage tail fiber protein 2640696 12762917 KO11_12325 Escherichia coli KO11FL phage tail fiber protein YP_006164791.1 2639413 D 595495 CDS YP_006164792.1 386700955 12762918 2640696..2641289 1 NC_017660.1 hypothetical protein 2641289 12762918 KO11_12330 Escherichia coli KO11FL hypothetical protein YP_006164792.1 2640696 D 595495 CDS YP_006164793.1 386700956 12762919 complement(2641261..2641701) 1 NC_017660.1 hypothetical protein 2641701 12762919 KO11_12335 Escherichia coli KO11FL hypothetical protein YP_006164793.1 2641261 R 595495 CDS YP_006164794.1 386700957 12762920 2642147..2642740 1 NC_017660.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs; DNA-invertase 2642740 12762920 KO11_12340 Escherichia coli KO11FL DNA-invertase YP_006164794.1 2642147 D 595495 CDS YP_006164795.1 386700958 12762921 2642800..2643990 1 NC_017660.1 COG3497 Phage tail sheath protein FI; Major tail sheath protein (Protein FI) 2643990 gpFI-2 12762921 gpFI-2 Escherichia coli KO11FL Major tail sheath protein (Protein FI) YP_006164795.1 2642800 D 595495 CDS YP_006164796.1 386700959 12762922 2644003..2644521 1 NC_017660.1 COG3498 Phage tail tube protein FII; major tail tube protein 2644521 gpFII-2 12762922 gpFII-2 Escherichia coli KO11FL major tail tube protein YP_006164796.1 2644003 D 595495 CDS YP_006164797.1 386700960 12762923 2644578..2644853 1 NC_017660.1 gpE'2; hypothetical protein 2644853 12762923 KO11_12355 Escherichia coli KO11FL hypothetical protein YP_006164797.1 2644578 D 595495 CDS YP_006164798.1 386700961 12762924 2644886..2645005 1 NC_017660.1 putative prophage tail protein 2645005 gpE'3 12762924 gpE'3 Escherichia coli KO11FL putative prophage tail protein YP_006164798.1 2644886 D 595495 CDS YP_006164799.1 386700962 12762925 2644998..2647445 1 NC_017660.1 COG5283 Phage-related tail protein; tail fiber protein T (tape measure) (GpT) 2647445 12762925 KO11_12365 Escherichia coli KO11FL tail fiber protein T (tape measure) (GpT) YP_006164799.1 2644998 D 595495 CDS YP_006164800.1 386700963 12762926 2647460..2647939 1 NC_017660.1 COG3499 Phage protein U; gpU phage protein 2647939 gpU-2 12762926 gpU-2 Escherichia coli KO11FL gpU phage protein YP_006164800.1 2647460 D 595495 CDS YP_006164801.1 386700964 12762927 2647939..2649102 1 NC_017660.1 COG3500 Phage protein D; phage protein D 2649102 gpD2 12762927 gpD2 Escherichia coli KO11FL phage protein D YP_006164801.1 2647939 D 595495 CDS YP_006164802.1 386700965 12762928 2649183..2649401 1 NC_017660.1 DNA-binding transcriptional regulator 2649401 ogr-2 12762928 ogr-2 Escherichia coli KO11FL DNA-binding transcriptional regulator YP_006164802.1 2649183 D 595495 CDS YP_006164803.1 386700966 12762929 complement(2649674..2651035) 1 NC_017660.1 COG0826 Collagenase and related proteases; putative protease 2651035 yegQ 12762929 yegQ Escherichia coli KO11FL putative protease YP_006164803.1 2649674 R 595495 CDS YP_006164804.1 386700967 12762930 complement(2651138..2651434) 1 NC_017660.1 COG3668 Plasmid stabilization system protein; hypothetical protein 2651434 12762930 KO11_12390 Escherichia coli KO11FL hypothetical protein YP_006164804.1 2651138 R 595495 CDS YP_006164805.1 386700968 12762931 complement(2651436..2651687) 1 NC_017660.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain; hypothetical protein 2651687 12762931 KO11_12395 Escherichia coli KO11FL hypothetical protein YP_006164805.1 2651436 R 595495 CDS YP_006164806.1 386700969 12762932 complement(2651941..2652273) 1 NC_017660.1 COG3422 Uncharacterized conserved protein; yegP; hypothetical protein 2652273 12762932 KO11_12400 Escherichia coli KO11FL hypothetical protein YP_006164806.1 2651941 R 595495 CDS YP_006164807.1 386700970 12762933 complement(2652464..2653186) 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator BaeR 2653186 baeR 12762933 baeR Escherichia coli KO11FL DNA-binding transcriptional regulator BaeR YP_006164807.1 2652464 R 595495 CDS YP_006164808.1 386700971 12762934 complement(2653183..2654586) 1 NC_017660.1 COG0642 Signal transduction histidine kinase; signal transduction histidine-protein kinase BaeS 2654586 baeS 12762934 baeS Escherichia coli KO11FL signal transduction histidine-protein kinase BaeS YP_006164808.1 2653183 R 595495 CDS YP_006164809.1 386700972 12762935 complement(2654583..2655998) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 2655998 mdtD 12762935 mdtD Escherichia coli KO11FL putative transporter YP_006164809.1 2654583 R 595495 CDS YP_006164810.1 386700973 12762936 complement(2655999..2659076) 1 NC_017660.1 COG0841 Cation/multidrug efflux pump; multidrug efflux system subunit MdtC 2659076 mdtC 12762936 mdtC Escherichia coli KO11FL multidrug efflux system subunit MdtC YP_006164810.1 2655999 R 595495 CDS YP_006164811.1 386700974 12762937 complement(2659077..2662199) 1 NC_017660.1 COG0841 Cation/multidrug efflux pump; multidrug efflux system subunit MdtB 2662199 mdtB 12762937 mdtB Escherichia coli KO11FL multidrug efflux system subunit MdtB YP_006164811.1 2659077 R 595495 CDS YP_006164812.1 386700975 12762938 complement(2662199..2663446) 1 NC_017660.1 COG0845 Membrane-fusion protein; multidrug efflux system subunit MdtA 2663446 mdtA 12762938 mdtA Escherichia coli KO11FL multidrug efflux system subunit MdtA YP_006164812.1 2662199 R 595495 CDS YP_006164813.1 386700976 12762939 2664662..2665321 1 NC_017660.1 COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain; yegL; hypothetical protein 2665321 12762939 KO11_12435 Escherichia coli KO11FL hypothetical protein YP_006164813.1 2664662 D 595495 CDS YP_006164814.1 386700977 12762940 2665318..2666079 1 NC_017660.1 yegK; hypothetical protein 2666079 12762940 KO11_12440 Escherichia coli KO11FL hypothetical protein YP_006164814.1 2665318 D 595495 CDS YP_006164815.1 386700978 12762941 complement(2666144..2666605) 1 NC_017660.1 COG3779 Uncharacterized protein conserved in bacteria; yegJ; hypothetical protein 2666605 12762941 KO11_12445 Escherichia coli KO11FL hypothetical protein YP_006164815.1 2666144 R 595495 CDS YP_006164816.1 386700979 12762942 2666842..2668749 1 NC_017660.1 COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains; yegI; hypothetical protein 2668749 12762942 KO11_12450 Escherichia coli KO11FL hypothetical protein YP_006164816.1 2666842 D 595495 CDS YP_006164817.1 386700980 12762943 complement(2668761..2670113) 1 NC_017660.1 COG0443 Molecular chaperone; putative chaperone 2670113 yegD 12762943 yegD Escherichia coli KO11FL putative chaperone YP_006164817.1 2668761 R 595495 CDS YP_006164818.1 386700981 12762944 2670247..2671104 1 NC_017660.1 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; 3-methyladenine DNA glycosylase 2671104 alkA 12762944 alkA Escherichia coli KO11FL 3-methyladenine DNA glycosylase YP_006164818.1 2670247 D 595495 CDS YP_006164819.1 386700982 12762945 complement(2671143..2674460) 1 NC_017660.1 COG2202 FOG: PAS/PAC domain; putative diguanylate cyclase 2674460 yegE 12762945 yegE Escherichia coli KO11FL putative diguanylate cyclase YP_006164819.1 2671143 R 595495 CDS YP_006164820.1 386700983 12762946 2674778..2675419 1 NC_017660.1 COG0572 Uridine kinase; uridine/cytidine kinase 2675419 udk 12762946 udk Escherichia coli KO11FL uridine/cytidine kinase YP_006164820.1 2674778 D 595495 CDS YP_006164821.1 386700984 12762947 2675511..2676092 1 NC_017660.1 COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase 2676092 dcd 12762947 dcd Escherichia coli KO11FL deoxycytidine triphosphate deaminase YP_006164821.1 2675511 D 595495 CDS YP_006164822.1 386700985 12762948 2676114..2677967 1 NC_017660.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis; putative assembly protein 2677967 asmA 12762948 asmA Escherichia coli KO11FL putative assembly protein YP_006164822.1 2676114 D 595495 CDS YP_006164823.1 386700986 12762949 complement(2678020..2678310) 1 NC_017660.1 COG5606 Uncharacterized conserved small protein; hypothetical protein 2678310 12762949 KO11_12485 Escherichia coli KO11FL hypothetical protein YP_006164823.1 2678020 R 595495 CDS YP_006164824.1 386700987 12762950 complement(2678300..2678638) 1 NC_017660.1 COG4679 Phage-related protein; hypothetical protein 2678638 12762950 KO11_12490 Escherichia coli KO11FL hypothetical protein YP_006164824.1 2678300 R 595495 CDS YP_006164825.1 386700988 12762951 complement(2678713..2680296) 1 NC_017660.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance; fused putative membrane protein/putative membrane protein 2680296 yegH 12762951 yegH Escherichia coli KO11FL fused putative membrane protein/putative membrane protein YP_006164825.1 2678713 R 595495 CDS YP_006164826.1 386700989 12762952 2681048..2682094 1 NC_017660.1 COG1596 Periplasmic protein involved in polysaccharide export; polysaccharide export protein Wza 2682094 wza 12762952 wza Escherichia coli KO11FL polysaccharide export protein Wza YP_006164826.1 2681048 D 595495 CDS YP_006164827.1 386700990 12762953 2682100..2682543 1 NC_017660.1 COG0394 Protein-tyrosine-phosphatase; tyrosine phosphatase 2682543 wzb 12762953 wzb Escherichia coli KO11FL tyrosine phosphatase YP_006164827.1 2682100 D 595495 CDS YP_006164828.1 386700991 12762954 2682546..2684708 1 NC_017660.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; tyrosine kinase 2684708 wzc 12762954 wzc Escherichia coli KO11FL tyrosine kinase YP_006164828.1 2682546 D 595495 CDS YP_006164829.1 386700992 12762955 2684886..2685725 1 NC_017660.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyl transferase 2685725 wcaA 12762955 wcaA Escherichia coli KO11FL putative glycosyl transferase YP_006164829.1 2684886 D 595495 CDS YP_006164830.1 386700993 12762956 2685728..2686216 1 NC_017660.1 COG1045 Serine acetyltransferase; putative acyl transferase 2686216 wcaB 12762956 wcaB Escherichia coli KO11FL putative acyl transferase YP_006164830.1 2685728 D 595495 CDS YP_006164831.1 386700994 12762957 2686213..2687430 1 NC_017660.1 COG0438 Glycosyltransferase; putative glycosyl transferase 2687430 wcaC 12762957 wcaC Escherichia coli KO11FL putative glycosyl transferase YP_006164831.1 2686213 D 595495 CDS YP_006164832.1 386700995 12762958 2687405..2688622 1 NC_017660.1 putative colanic acid biosynthesis protein 2688622 wcaD 12762958 wcaD Escherichia coli KO11FL putative colanic acid biosynthesis protein YP_006164832.1 2687405 D 595495 CDS YP_006164833.1 386700996 12762959 2688633..2689379 1 NC_017660.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyl transferase 2689379 wcaE 12762959 wcaE Escherichia coli KO11FL putative glycosyl transferase YP_006164833.1 2688633 D 595495 CDS YP_006164834.1 386700997 12762960 2689395..2689943 1 NC_017660.1 COG0110 Acetyltransferase (isoleucine patch superfamily); putative acyl transferase 2689943 wcaF 12762960 wcaF Escherichia coli KO11FL putative acyl transferase YP_006164834.1 2689395 D 595495 CDS YP_006164835.1 386700998 12762961 2689969..2691090 1 NC_017660.1 COG1089 GDP-D-mannose dehydratase; GDP-mannose 4,6-dehydratase 2691090 gmd 12762961 gmd Escherichia coli KO11FL GDP-mannose 4,6-dehydratase YP_006164835.1 2689969 D 595495 CDS YP_006164836.1 386700999 12762962 2691093..2692058 1 NC_017660.1 COG0451 Nucleoside-diphosphate-sugar epimerases; GDP-mannose-4-keto-6-D epimerase 2692058 fcl 12762962 fcl Escherichia coli KO11FL GDP-mannose-4-keto-6-D epimerase YP_006164836.1 2691093 D 595495 CDS YP_006164837.1 386701000 12762963 2692058..2692540 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; GDP-mannose mannosyl hydrolase 2692540 gmm 12762963 gmm Escherichia coli KO11FL GDP-mannose mannosyl hydrolase YP_006164837.1 2692058 D 595495 CDS YP_006164838.1 386701001 12762964 2692537..2693760 1 NC_017660.1 COG0438 Glycosyltransferase; putative glycosyl transferase 2693760 wcaI 12762964 wcaI Escherichia coli KO11FL putative glycosyl transferase YP_006164838.1 2692537 D 595495 CDS YP_006164839.1 386701002 12762965 2693763..2695199 1 NC_017660.1 COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanyltransferase 2695199 cpsB 12762965 cpsB Escherichia coli KO11FL mannose-1-phosphate guanyltransferase YP_006164839.1 2693763 D 595495 CDS YP_006164840.1 386701003 12762966 2695392..2696762 1 NC_017660.1 COG1109 Phosphomannomutase; phosphomannomutase 2696762 cpsG 12762966 cpsG Escherichia coli KO11FL phosphomannomutase YP_006164840.1 2695392 D 595495 CDS YP_006164841.1 386701004 12762967 2696817..2698211 1 NC_017660.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis; putative UDP-glucose lipid carrier transferase 2698211 wcaJ 12762967 wcaJ Escherichia coli KO11FL putative UDP-glucose lipid carrier transferase YP_006164841.1 2696817 D 595495 CDS YP_006164842.1 386701005 12762968 2698213..2699691 1 NC_017660.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; colanic acid exporter 2699691 wzxC 12762968 wzxC Escherichia coli KO11FL colanic acid exporter YP_006164842.1 2698213 D 595495 CDS YP_006164843.1 386701006 12762969 2700063..2701343 1 NC_017660.1 COG2327 Uncharacterized conserved protein; colanic acid biosynthesis protein 2701343 wcaK 12762969 wcaK Escherichia coli KO11FL colanic acid biosynthesis protein YP_006164843.1 2700063 D 595495 CDS YP_006164844.1 386701007 12762970 2701340..2702560 1 NC_017660.1 COG0438 Glycosyltransferase; colanic acid biosynthesis glycosyltransferase WcaL 2702560 wcaL 12762970 wcaL Escherichia coli KO11FL colanic acid biosynthesis glycosyltransferase WcaL YP_006164844.1 2701340 D 595495 CDS YP_006164845.1 386701008 12762971 2702571..2703965 1 NC_017660.1 putative colanic acid biosynthesis protein 2703965 wcaM 12762971 wcaM Escherichia coli KO11FL putative colanic acid biosynthesis protein YP_006164845.1 2702571 D 595495 CDS YP_006164846.1 386701009 12762972 2704140..2705033 1 NC_017660.1 COG1210 UDP-glucose pyrophosphorylase; GalU regulator GalF 2705033 galF 12762972 galF Escherichia coli KO11FL GalU regulator GalF YP_006164846.1 2704140 D 595495 CDS YP_006164847.1 386701010 12762973 2705408..2706646 1 NC_017660.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; putative O antigen flippase 2706646 12762973 KO11_12605 Escherichia coli KO11FL putative O antigen flippase YP_006164847.1 2705408 D 595495 CDS YP_006164848.1 386701011 12762974 2706646..2707989 1 NC_017660.1 antigen polymerase 2707989 12762974 KO11_12610 Escherichia coli KO11FL antigen polymerase YP_006164848.1 2706646 D 595495 CDS YP_006164849.1 386701012 12762975 2707995..2708855 1 NC_017660.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyltransferase 2708855 12762975 KO11_12615 Escherichia coli KO11FL putative glycosyltransferase YP_006164849.1 2707995 D 595495 CDS YP_006164850.1 386701013 12762976 2708852..2709883 1 NC_017660.1 COG0438 Glycosyltransferase; putative glycosyltransferase 2709883 12762976 KO11_12620 Escherichia coli KO11FL putative glycosyltransferase YP_006164850.1 2708852 D 595495 CDS YP_006164851.1 386701014 12762977 2709870..2711015 1 NC_017660.1 COG0438 Glycosyltransferase; glycosyltransferase 2711015 12762977 KO11_12625 Escherichia coli KO11FL glycosyltransferase YP_006164851.1 2709870 D 595495 CDS YP_006164852.1 386701015 12762978 2711032..2712039 1 NC_017660.1 COG1087 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 2712039 12762978 KO11_12630 Escherichia coli KO11FL UDP-glucose 4-epimerase YP_006164852.1 2711032 D 595495 CDS YP_006164853.1 386701016 12762979 2712060..2713265 1 NC_017660.1 COG0438 Glycosyltransferase; putative glycosyltransferase 2713265 12762979 KO11_12635 Escherichia coli KO11FL putative glycosyltransferase YP_006164853.1 2712060 D 595495 CDS YP_006164854.1 386701017 12762980 2713255..2714694 1 NC_017660.1 COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 2714694 manC 12762980 manC Escherichia coli KO11FL mannose-1-phosphate guanylyltransferase YP_006164854.1 2713255 D 595495 CDS YP_006164855.1 386701018 12762981 2714777..2716147 1 NC_017660.1 COG1109 Phosphomannomutase; phosphomannomutase 2716147 manB 12762981 manB Escherichia coli KO11FL phosphomannomutase YP_006164855.1 2714777 D 595495 CDS YP_006164856.1 386701019 12762982 2716311..2717717 1 NC_017660.1 COG0362 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 2717717 gnd 12762982 gnd Escherichia coli KO11FL 6-phosphogluconate dehydrogenase YP_006164856.1 2716311 D 595495 CDS YP_006164857.1 386701020 12762983 2717966..2719132 1 NC_017660.1 COG1004 Predicted UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 2719132 ugd 12762983 ugd Escherichia coli KO11FL UDP-glucose 6-dehydrogenase YP_006164857.1 2717966 D 595495 CDS YP_006164858.1 386701021 12762984 2719278..2720255 1 NC_017660.1 COG3765 Chain length determinant protein; chain length determinant protein WzzB 2720255 cld 12762984 cld Escherichia coli KO11FL chain length determinant protein WzzB YP_006164858.1 2719278 D 595495 CDS YP_006164859.1 386701022 12762985 complement(2720351..2720959) 1 NC_017660.1 COG0139 Phosphoribosyl-AMP cyclohydrolase; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 2720959 hisI 12762985 hisI Escherichia coli KO11FL bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_006164859.1 2720351 R 595495 CDS YP_006164860.1 386701023 12762986 complement(2720953..2721729) 1 NC_017660.1 COG0107 Imidazoleglycerol-phosphate synthase; imidazole glycerol phosphate synthase subunit HisF 2721729 hisF 12762986 hisF Escherichia coli KO11FL imidazole glycerol phosphate synthase subunit HisF YP_006164860.1 2720953 R 595495 CDS YP_006164861.1 386701024 12762987 complement(2721711..2722448) 1 NC_017660.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2722448 hisA 12762987 hisA Escherichia coli KO11FL 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_006164861.1 2721711 R 595495 CDS YP_006164862.1 386701025 12762988 complement(2722448..2723038) 1 NC_017660.1 COG0118 Glutamine amidotransferase; imidazole glycerol phosphate synthase subunit HisH 2723038 hisH 12762988 hisH Escherichia coli KO11FL imidazole glycerol phosphate synthase subunit HisH YP_006164862.1 2722448 R 595495 CDS YP_006164863.1 386701026 12762989 complement(2723038..2724105) 1 NC_017660.1 COG0241 Histidinol phosphatase and related phosphatases; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2724105 hisB 12762989 hisB Escherichia coli KO11FL imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_006164863.1 2723038 R 595495 CDS YP_006164864.1 386701027 12762990 complement(2724105..2725175) 1 NC_017660.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; histidinol-phosphate aminotransferase 2725175 hisC 12762990 hisC Escherichia coli KO11FL histidinol-phosphate aminotransferase YP_006164864.1 2724105 R 595495 CDS YP_006164865.1 386701028 12762991 complement(2725172..2726476) 1 NC_017660.1 COG0141 Histidinol dehydrogenase; bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 2726476 hisD 12762991 hisD Escherichia coli KO11FL bifunctional histidinal dehydrogenase/ histidinol dehydrogenase YP_006164865.1 2725172 R 595495 CDS YP_006164866.1 386701029 12762992 complement(2726482..2727381) 1 NC_017660.1 COG0040 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase 2727381 hisG 12762992 hisG Escherichia coli KO11FL ATP phosphoribosyltransferase YP_006164866.1 2726482 R 595495 CDS YP_006164868.1 386701031 12762994 2727860..2728111 1 NC_017660.1 COG2161 Antitoxin of toxin-antitoxin stability system; antitoxin YefM 2728111 yefM 12762994 yefM Escherichia coli KO11FL antitoxin YefM YP_006164868.1 2727860 D 595495 CDS YP_006164869.1 386701032 12762995 2728108..2728362 1 NC_017660.1 COG4115 Uncharacterized protein conserved in bacteria; Toxin yoeB 2728362 yoeB 12762995 yoeB Escherichia coli KO11FL Toxin yoeB YP_006164869.1 2728108 D 595495 CDS YP_006164870.1 386701033 12762996 2728445..2729269 1 NC_017660.1 COG0451 Nucleoside-diphosphate-sugar epimerases; putative enzyme of sugar metabolism 2729269 yeeZ 12762996 yeeZ Escherichia coli KO11FL putative enzyme of sugar metabolism YP_006164870.1 2728445 D 595495 CDS YP_006164871.1 386701034 12762997 2729315..2730244 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 2730244 yeeY 12762997 yeeY Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006164871.1 2729315 D 595495 CDS YP_006164872.1 386701035 12762998 2730511..2731869 1 NC_017660.1 COG0531 Amino acid transporters; amino acid permease 2731869 yeeF 12762998 yeeF Escherichia coli KO11FL amino acid permease YP_006164872.1 2730511 D 595495 CDS YP_006164873.1 386701036 12762999 2732048..2733106 1 NC_017660.1 COG2391 Predicted transporter component; putative inner membrane protein 2733106 yeeE 12762999 yeeE Escherichia coli KO11FL putative inner membrane protein YP_006164873.1 2732048 D 595495 CDS YP_006164874.1 386701037 12763000 2733120..2733347 1 NC_017660.1 COG0425 Predicted redox protein, regulator of disulfide bond formation; yeeD; hypothetical protein 2733347 12763000 KO11_12735 Escherichia coli KO11FL hypothetical protein YP_006164874.1 2733120 D 595495 CDS YP_006164875.1 386701038 12763001 complement(2733390..2734817) 1 NC_017660.1 COG2925 Exonuclease I; exonuclease I 2734817 sbcB 12763001 sbcB Escherichia coli KO11FL exonuclease I YP_006164875.1 2733390 R 595495 CDS YP_006164876.1 386701039 12763002 2735026..2736192 1 NC_017660.1 COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 2736192 dacD 12763002 dacD Escherichia coli KO11FL D-alanyl-D-alanine carboxypeptidase YP_006164876.1 2735026 D 595495 CDS YP_006164877.1 386701040 12763003 2736311..2736784 1 NC_017660.1 COG3449 DNA gyrase inhibitor; DNA gyrase inhibitor 2736784 sbmC 12763003 sbmC Escherichia coli KO11FL DNA gyrase inhibitor YP_006164877.1 2736311 D 595495 CDS YP_006164878.1 386701041 12763004 2736982..2738040 1 NC_017660.1 COG1289 Predicted membrane protein; inner membrane protein YeeA 2738040 yeeA 12763004 yeeA Escherichia coli KO11FL inner membrane protein YeeA YP_006164878.1 2736982 D 595495 CDS YP_006164879.1 386701042 12763005 2738212..2738541 1 NC_017660.1 COG2926 Uncharacterized protein conserved in bacteria; yeeX; hypothetical protein 2738541 12763005 KO11_12760 Escherichia coli KO11FL hypothetical protein YP_006164879.1 2738212 D 595495 CDS YP_006164880.1 386701043 12763006 complement(2738642..2738761) 1 NC_017660.1 putative propanediol utilization protein 2738761 yoeF 12763006 yoeF Escherichia coli KO11FL putative propanediol utilization protein YP_006164880.1 2738642 R 595495 CDS YP_006164881.1 386701044 12763007 2739003..2739545 1 NC_017660.1 COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 2739545 cobU 12763007 cobU Escherichia coli KO11FL adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase YP_006164881.1 2739003 D 595495 CDS YP_006164882.1 386701045 12763008 2739542..2740285 1 NC_017660.1 COG0368 Cobalamin-5-phosphate synthase; cobalamin synthase 2740285 cobS 12763008 cobS Escherichia coli KO11FL cobalamin synthase YP_006164882.1 2739542 D 595495 CDS YP_006164883.1 386701046 12763009 2740297..2741376 1 NC_017660.1 COG2038 NaMN:DMB phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2741376 cobT 12763009 cobT Escherichia coli KO11FL nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_006164883.1 2740297 D 595495 CDS YP_006164884.1 386701047 12763010 2741438..2742373 1 NC_017660.1 COG1376 Uncharacterized protein conserved in bacteria; L,D-transpeptidase 2742373 erfK 12763010 erfK Escherichia coli KO11FL L,D-transpeptidase YP_006164884.1 2741438 D 595495 CDS YP_006164885.1 386701048 12763012 2742831..2743748 1 NC_017660.1 COG0583 Transcriptional regulator; nitrogen assimilation transcriptional regulator 2743748 nac 12763012 nac Escherichia coli KO11FL nitrogen assimilation transcriptional regulator YP_006164885.1 2742831 D 595495 CDS YP_006164886.1 386701049 12763013 2743850..2744800 1 NC_017660.1 COG0583 Transcriptional regulator; transcriptional regulator Cbl 2744800 cbl 12763013 cbl Escherichia coli KO11FL transcriptional regulator Cbl YP_006164886.1 2743850 D 595495 CDS YP_006164887.1 386701050 12763015 2744921..2746561 1 NC_017660.1 COG0534 Na+-driven multidrug efflux pump; MATE family multidrug exporter 2746561 yeeO 12763015 yeeO Escherichia coli KO11FL MATE family multidrug exporter YP_006164887.1 2744921 D 595495 CDS YP_006164888.1 386701051 12763017 2746968..2747195 1 NC_017660.1 hypothetical protein 2747195 12763017 KO11_12805 Escherichia coli KO11FL hypothetical protein YP_006164888.1 2746968 D 595495 CDS YP_006164889.1 386701052 12763018 complement(2747196..2747336) 1 NC_017660.1 COG0217 Uncharacterized conserved protein; fragmented by IS10 insertion; yeeN_2 2747336 12763018 KO11_12810 Escherichia coli KO11FL yeeN_2 YP_006164889.1 2747196 R 595495 CDS YP_006164890.1 386701053 12763019 2747409..2748617 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 2748617 12763019 KO11_12815 Escherichia coli KO11FL IS10 transposase YP_006164890.1 2747409 D 595495 CDS YP_006164891.1 386701054 12763020 complement(2748627..2749250) 1 NC_017660.1 COG0217 Uncharacterized conserved protein; yeeN_1; hypothetical protein 2749250 12763020 KO11_12820 Escherichia coli KO11FL hypothetical protein YP_006164891.1 2748627 R 595495 CDS YP_006164892.1 386701055 12763021 complement(2749593..2751047) 1 NC_017660.1 COG0775 Nucleoside phosphorylase; AMP nucleosidase 2751047 amn 12763021 amn Escherichia coli KO11FL AMP nucleosidase YP_006164892.1 2749593 R 595495 CDS YP_006164893.1 386701056 12763022 complement(2751149..2752465) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; shikimate transporter 2752465 shiA 12763022 shiA Escherichia coli KO11FL shikimate transporter YP_006164893.1 2751149 R 595495 CDS YP_006164894.1 386701057 12763023 2752780..2753832 1 NC_017660.1 COG0859 ADP-heptose:LPS heptosyltransferase; yeeL; hypothetical protein 2753832 12763023 KO11_12835 Escherichia coli KO11FL hypothetical protein YP_006164894.1 2752780 D 595495 CDS YP_006164895.1 386701058 12763026 complement(2761659..2762456) 1 NC_017660.1 COG3228 Uncharacterized protein conserved in bacteria; DgsA anti-repressor MtfA 2762456 mtfA 12763026 mtfA Escherichia coli KO11FL DgsA anti-repressor MtfA YP_006164895.1 2761659 R 595495 CDS YP_006164896.1 386701059 12763060 complement(2763209..2763739) 1 NC_017660.1 COG3038 Cytochrome B561; putative cytochrome 2763739 yodB 12763060 yodB Escherichia coli KO11FL putative cytochrome YP_006164896.1 2763209 R 595495 CDS YP_006164897.1 386701060 12763061 complement(2764082..2764732) 1 NC_017660.1 COG3443 Predicted periplasmic or secreted protein; zinc/cadmium-binding protein 2764732 zinT 12763061 zinT Escherichia coli KO11FL zinc/cadmium-binding protein YP_006164897.1 2764082 R 595495 CDS YP_006164898.1 386701061 12763062 complement(2764989..2765624) 1 NC_017660.1 COG2717 Predicted membrane protein; putative sulfite oxidase subunit YedZ 2765624 yedZ 12763062 yedZ Escherichia coli KO11FL putative sulfite oxidase subunit YedZ YP_006164898.1 2764989 R 595495 CDS YP_006164899.1 386701062 12763063 complement(2765625..2766629) 1 NC_017660.1 COG2041 Sulfite oxidase and related enzymes; TMAO/DMSO reductase 2766629 yedY 12763063 yedY Escherichia coli KO11FL TMAO/DMSO reductase YP_006164899.1 2765625 R 595495 CDS YP_006164900.1 386701063 12763064 complement(2766738..2767151) 1 NC_017660.1 COG2351 Transthyretin-like protein; hydroxyisourate hydrolase 2767151 hiuH 12763064 hiuH Escherichia coli KO11FL hydroxyisourate hydrolase YP_006164900.1 2766738 R 595495 CDS YP_006164901.1 386701064 12763065 2767173..2767955 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulatory protein YedW 2767955 yedW 12763065 yedW Escherichia coli KO11FL transcriptional regulatory protein YedW YP_006164901.1 2767173 D 595495 CDS YP_006164902.1 386701065 12763066 2767955..2769313 1 NC_017660.1 COG0642 Signal transduction histidine kinase; two-component sensor kinase 2769313 yedV 12763066 yedV Escherichia coli KO11FL two-component sensor kinase YP_006164902.1 2767955 D 595495 CDS YP_006164903.1 386701066 12763067 complement(2769421..2770272) 1 NC_017660.1 COG0693 Putative intracellular protease/amidase; chaperone protein HchA 2770272 hchA 12763067 hchA Escherichia coli KO11FL chaperone protein HchA YP_006164903.1 2769421 R 595495 CDS YP_006164904.1 386701067 12763068 complement(2770864..2771979) 1 NC_017660.1 COG3203 Outer membrane protein (porin); Outer membrane protein N precursor 2771979 ompN2 12763068 ompN2 Escherichia coli KO11FL Outer membrane protein N precursor YP_006164904.1 2770864 R 595495 CDS YP_006164905.1 386701068 12763069 2772609..2772911 1 NC_017660.1 hypothetical protein 2772911 12763069 KO11_12900 Escherichia coli KO11FL hypothetical protein YP_006164905.1 2772609 D 595495 CDS YP_006164906.1 386701069 12763070 2772951..2773646 1 NC_017660.1 COG1418 Predicted HD superfamily hydrolase; putative hydrolase 2773646 yedJ 12763070 yedJ Escherichia coli KO11FL putative hydrolase YP_006164906.1 2772951 D 595495 CDS YP_006164907.1 386701070 12763071 2773713..2775131 1 NC_017660.1 COG0270 Site-specific DNA methylase; DNA cytosine methylase 2775131 dcm 12763071 dcm Escherichia coli KO11FL DNA cytosine methylase YP_006164907.1 2773713 D 595495 CDS YP_006164908.1 386701071 12763072 2775112..2775582 1 NC_017660.1 COG3727 DNA G:T-mismatch repair endonuclease; very short patch repair protein 2775582 vsr 12763072 vsr Escherichia coli KO11FL very short patch repair protein YP_006164908.1 2775112 D 595495 CDS YP_006164909.1 386701072 12763073 complement(2775571..2776500) 1 NC_017660.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative DMT superfamily transporter inner membrane protein 2776500 yedA 12763073 yedA Escherichia coli KO11FL putative DMT superfamily transporter inner membrane protein YP_006164909.1 2775571 R 595495 CDS YP_006164910.1 386701073 12763074 2776673..2777590 1 NC_017660.1 COG2354 Uncharacterized protein conserved in bacteria; yedI; hypothetical protein 2777590 12763074 KO11_12925 Escherichia coli KO11FL hypothetical protein YP_006164910.1 2776673 D 595495 CDS YP_006164911.1 386701074 12763075 2777669..2777851 1 NC_017660.1 COG5475 Uncharacterized small protein; yodC; hypothetical protein 2777851 12763075 KO11_12930 Escherichia coli KO11FL hypothetical protein YP_006164911.1 2777669 D 595495 CDS YP_006164912.1 386701075 12763076 2778040..2779716 1 NC_017660.1 COG2199 FOG: GGDEF domain; diguanylate cyclase 2779716 yedQ 12763076 yedQ Escherichia coli KO11FL diguanylate cyclase YP_006164912.1 2778040 D 595495 CDS YP_006164913.1 386701076 12763077 complement(2779713..2780528) 1 NC_017660.1 COG3769 Predicted hydrolase (HAD superfamily); mannosyl-3-phosphoglycerate phosphatase 2780528 yedP 12763077 yedP Escherichia coli KO11FL mannosyl-3-phosphoglycerate phosphatase YP_006164913.1 2779713 R 595495 CDS YP_006164914.1 386701077 12763078 complement(2780826..2781053) 1 NC_017660.1 yodD; hypothetical protein 2781053 12763078 KO11_12945 Escherichia coli KO11FL hypothetical protein YP_006164914.1 2780826 R 595495 CDS YP_006164915.1 386701078 12763079 2781216..2781404 1 NC_017660.1 dsrB; hypothetical protein 2781404 12763079 KO11_12950 Escherichia coli KO11FL hypothetical protein YP_006164915.1 2781216 D 595495 CDS YP_006164916.1 386701079 12763080 complement(2781448..2782071) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; colanic acid capsular biosynthesis activation protein A 2782071 rcsA 12763080 rcsA Escherichia coli KO11FL colanic acid capsular biosynthesis activation protein A YP_006164916.1 2781448 R 595495 CDS YP_006164917.1 386701080 12763081 complement(2782361..2783146) 1 NC_017660.1 COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR 2783146 fliR 12763081 fliR Escherichia coli KO11FL flagellar biosynthesis protein FliR YP_006164917.1 2782361 R 595495 CDS YP_006164918.1 386701081 12763082 complement(2783155..2783424) 1 NC_017660.1 COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ 2783424 fliQ 12763082 fliQ Escherichia coli KO11FL flagellar biosynthesis protein FliQ YP_006164918.1 2783155 R 595495 CDS YP_006164919.1 386701082 12763083 complement(2783434..2784171) 1 NC_017660.1 COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP 2784171 fliP 12763083 fliP Escherichia coli KO11FL flagellar biosynthesis protein FliP YP_006164919.1 2783434 R 595495 CDS YP_006164920.1 386701083 12763084 complement(2784171..2784536) 1 NC_017660.1 COG3190 Flagellar biogenesis protein; flagellar biosynthesis protein FliO 2784536 fliO 12763084 fliO Escherichia coli KO11FL flagellar biosynthesis protein FliO YP_006164920.1 2784171 R 595495 CDS YP_006164921.1 386701084 12763085 complement(2784539..2784952) 1 NC_017660.1 COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein FliN 2784952 fliN 12763085 fliN Escherichia coli KO11FL flagellar motor switch protein FliN YP_006164921.1 2784539 R 595495 CDS YP_006164922.1 386701085 12763086 complement(2784949..2785953) 1 NC_017660.1 COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM 2785953 fliM 12763086 fliM Escherichia coli KO11FL flagellar motor switch protein FliM YP_006164922.1 2784949 R 595495 CDS YP_006164923.1 386701086 12763087 complement(2785958..2786422) 1 NC_017660.1 COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL 2786422 fliL 12763087 fliL Escherichia coli KO11FL flagellar basal body-associated protein FliL YP_006164923.1 2785958 R 595495 CDS YP_006164924.1 386701087 12763088 complement(2786527..2787654) 1 NC_017660.1 COG3144 Flagellar hook-length control protein; flagellar hook-length control protein 2787654 fliK 12763088 fliK Escherichia coli KO11FL flagellar hook-length control protein YP_006164924.1 2786527 R 595495 CDS YP_006164925.1 386701088 12763089 complement(2787651..2788094) 1 NC_017660.1 COG2882 Flagellar biosynthesis chaperone; flagellar biosynthesis chaperone 2788094 fliJ 12763089 fliJ Escherichia coli KO11FL flagellar biosynthesis chaperone YP_006164925.1 2787651 R 595495 CDS YP_006164926.1 386701089 12763090 complement(2788113..2789486) 1 NC_017660.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase 2789486 fliI 12763090 fliI Escherichia coli KO11FL flagellum-specific ATP synthase YP_006164926.1 2788113 R 595495 CDS YP_006164927.1 386701090 12763091 complement(2789486..2790172) 1 NC_017660.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H 2790172 fliH 12763091 fliH Escherichia coli KO11FL flagellar assembly protein H YP_006164927.1 2789486 R 595495 CDS YP_006164928.1 386701091 12763092 complement(2790165..2791160) 1 NC_017660.1 COG1536 Flagellar motor switch protein; flagellar motor switch protein G 2791160 fliG 12763092 fliG Escherichia coli KO11FL flagellar motor switch protein G YP_006164928.1 2790165 R 595495 CDS YP_006164929.1 386701092 12763093 complement(2791153..2792811) 1 NC_017660.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein 2792811 fliF 12763093 fliF Escherichia coli KO11FL flagellar MS-ring protein YP_006164929.1 2791153 R 595495 CDS YP_006164930.1 386701093 12763094 2793026..2793340 1 NC_017660.1 COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE 2793340 fliE 12763094 fliE Escherichia coli KO11FL flagellar hook-basal body protein FliE YP_006164930.1 2793026 D 595495 CDS YP_006164931.1 386701094 12763095 complement(2793418..2793597) 1 NC_017660.1 hypothetical protein 2793597 12763095 KO11_13035 Escherichia coli KO11FL hypothetical protein YP_006164931.1 2793418 R 595495 CDS YP_006164932.1 386701095 12763096 2793674..2794006 1 NC_017660.1 COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux protein 2794006 emrE 12763096 emrE Escherichia coli KO11FL multidrug efflux protein YP_006164932.1 2793674 D 595495 CDS YP_006164933.1 386701096 12763097 2794175..2794726 1 NC_017660.1 COG1881 Phospholipid-binding protein; putative kinase inhibitor 2794726 ybcL 12763097 ybcL Escherichia coli KO11FL putative kinase inhibitor YP_006164933.1 2794175 D 595495 CDS YP_006164934.1 386701097 12763098 2794736..2795533 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative ARAC-type regulatory protein 2795533 ybcM 12763098 ybcM Escherichia coli KO11FL putative ARAC-type regulatory protein YP_006164934.1 2794736 D 595495 CDS YP_006164935.1 386701098 12763099 complement(2796263..2796874) 1 NC_017660.1 COG1943 Transposase and inactivated derivatives; putative IS609 transposase TnpA 2796874 12763099 KO11_13055 Escherichia coli KO11FL putative IS609 transposase TnpA YP_006164935.1 2796263 R 595495 CDS YP_006164936.1 386701099 12763100 2797005..2798153 1 NC_017660.1 COG0675 Transposase and inactivated derivatives; putative IS609 transposase TnpB 2798153 ydcM1 12763100 ydcM1 Escherichia coli KO11FL putative IS609 transposase TnpB YP_006164936.1 2797005 D 595495 CDS YP_006164937.1 386701100 12763101 complement(2798193..2798483) 1 NC_017660.1 COG2135 Uncharacterized conserved protein; yedK2; hypothetical protein 2798483 12763101 KO11_13065 Escherichia coli KO11FL hypothetical protein YP_006164937.1 2798193 R 595495 CDS YP_006164938.1 386701101 12763102 complement(2798471..2798863) 1 NC_017660.1 COG2135 Uncharacterized conserved protein; interrupted by frameshift; yedK1; hypothetical protein 2798863 12763102 KO11_13070 Escherichia coli KO11FL hypothetical protein YP_006164938.1 2798471 R 595495 CDS YP_006164939.1 386701102 12763103 complement(2798970..2799203) 1 NC_017660.1 COG0425 Predicted redox protein, regulator of disulfide bond formation; yedF; hypothetical protein 2799203 12763103 KO11_13075 Escherichia coli KO11FL hypothetical protein YP_006164939.1 2798970 R 595495 CDS YP_006164940.1 386701103 12763104 complement(2799200..2800405) 1 NC_017660.1 COG2391 Predicted transporter component; putative inner membrane protein 2800405 yedE 12763104 yedE Escherichia coli KO11FL putative inner membrane protein YP_006164940.1 2799200 R 595495 CDS YP_006164941.1 386701104 12763105 2800592..2801005 1 NC_017660.1 lipoprotein 2801005 yedD 12763105 yedD Escherichia coli KO11FL lipoprotein YP_006164941.1 2800592 D 595495 CDS YP_006164942.1 386701105 12763106 complement(2801039..2802526) 1 NC_017660.1 COG0366 Glycosidases; alpha-amylase 2802526 amyA 12763106 amyA Escherichia coli KO11FL alpha-amylase YP_006164942.1 2801039 R 595495 CDS YP_006164943.1 386701106 12763107 complement(2802604..2802969) 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; flagellar biosynthesis protein FliT 2802969 fliT 12763107 fliT Escherichia coli KO11FL flagellar biosynthesis protein FliT YP_006164943.1 2802604 R 595495 CDS YP_006164944.1 386701107 12763108 complement(2802969..2803379) 1 NC_017660.1 COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS 2803379 fliS 12763108 fliS Escherichia coli KO11FL flagellar protein FliS YP_006164944.1 2802969 R 595495 CDS YP_006164945.1 386701108 12763109 complement(2803404..2804810) 1 NC_017660.1 COG1345 Flagellar capping protein; flagellar capping protein 2804810 fliD 12763109 fliD Escherichia coli KO11FL flagellar capping protein YP_006164945.1 2803404 R 595495 CDS YP_006164946.1 386701109 12763110 2805076..2806770 1 NC_017660.1 COG1344 Flagellin and related hook-associated proteins; flagellin 2806770 fliC 12763110 fliC Escherichia coli KO11FL flagellin YP_006164946.1 2805076 D 595495 CDS YP_006164947.1 386701110 12763111 2807120..2807809 1 NC_017660.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 2807809 fliA 12763111 fliA Escherichia coli KO11FL flagellar biosynthesis sigma factor YP_006164947.1 2807120 D 595495 CDS YP_006164948.1 386701111 12763112 2807855..2808406 1 NC_017660.1 flagella biosynthesis protein FliZ 2808406 fliZ 12763112 fliZ Escherichia coli KO11FL flagella biosynthesis protein FliZ YP_006164948.1 2807855 D 595495 CDS YP_006164949.1 386701112 12763113 2808494..2809294 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; cystine transporter subunit 2809294 fliY 12763113 fliY Escherichia coli KO11FL cystine transporter subunit YP_006164949.1 2808494 D 595495 CDS YP_006164950.1 386701113 12763114 2809399..2810385 1 NC_017660.1 COG2515 1-aminocyclopropane-1-carboxylate deaminase; D-cysteine desulfhydrase 2810385 dcyD 12763114 dcyD Escherichia coli KO11FL D-cysteine desulfhydrase YP_006164950.1 2809399 D 595495 CDS YP_006164951.1 386701114 12763115 2810400..2811068 1 NC_017660.1 COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease 2811068 yecS 12763115 yecS Escherichia coli KO11FL amino acid ABC transporter permease YP_006164951.1 2810400 D 595495 CDS YP_006164952.1 386701115 12763116 2811065..2811817 1 NC_017660.1 COG1126 ABC-type polar amino acid transport system, ATPase component; putative amino-acid ABC transporter ATP-binding protein YecC 2811817 yecC 12763116 yecC Escherichia coli KO11FL putative amino-acid ABC transporter ATP-binding protein YecC YP_006164952.1 2811065 D 595495 CDS YP_006164953.1 386701116 12763117 2812047..2812769 1 NC_017660.1 COG2771 DNA-binding HTH domain-containing proteins; DNA-binding transcriptional activator SdiA 2812769 sdiA 12763117 sdiA Escherichia coli KO11FL DNA-binding transcriptional activator SdiA YP_006164953.1 2812047 D 595495 CDS YP_006164954.1 386701117 12763118 complement(2812836..2813060) 1 NC_017660.1 yecF; hypothetical protein 2813060 12763118 KO11_13150 Escherichia coli KO11FL hypothetical protein YP_006164954.1 2812836 R 595495 CDS YP_006164955.1 386701118 12763119 complement(2813047..2813223) 1 NC_017660.1 hypothetical protein 2813223 12763119 KO11_13155 Escherichia coli KO11FL hypothetical protein YP_006164955.1 2813047 R 595495 CDS YP_006164956.1 386701119 12763120 2813519..2814175 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; response regulator 2814175 uvrY 12763120 uvrY Escherichia coli KO11FL response regulator YP_006164956.1 2813519 D 595495 CDS YP_006164957.1 386701120 12763121 2814172..2816004 1 NC_017660.1 COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 2816004 uvrC 12763121 uvrC Escherichia coli KO11FL excinuclease ABC subunit C YP_006164957.1 2814172 D 595495 CDS YP_006164958.1 386701121 12763122 2816061..2816609 1 NC_017660.1 COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthetase 2816609 pgsA 12763122 pgsA Escherichia coli KO11FL phosphatidylglycerophosphate synthetase YP_006164958.1 2816061 D 595495 CDS YP_006164959.1 386701122 12763126 2817258..2817923 1 NC_017660.1 COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; yecA; hypothetical protein 2817923 12763126 KO11_13175 Escherichia coli KO11FL hypothetical protein YP_006164959.1 2817258 D 595495 CDS YP_006164960.1 386701123 12763127 complement(2817985..2819196) 1 NC_017660.1 COG0814 Amino acid permeases; tyrosine transporter TyrP 2819196 tyrP 12763127 tyrP Escherichia coli KO11FL tyrosine transporter TyrP YP_006164960.1 2817985 R 595495 CDS YP_006164961.1 386701124 12763128 2819387..2819626 1 NC_017660.1 yecH; hypothetical protein 2819626 12763128 KO11_13185 Escherichia coli KO11FL hypothetical protein YP_006164961.1 2819387 D 595495 CDS YP_006164962.1 386701125 12763129 complement(2819664..2820161) 1 NC_017660.1 COG1528 Ferritin-like protein; ferritin 2820161 ftnA 12763129 ftnA Escherichia coli KO11FL ferritin YP_006164962.1 2819664 R 595495 CDS YP_006164963.1 386701126 12763130 complement(2820332..2820655) 1 NC_017660.1 putative lipoprotein 2820655 yecR 12763130 yecR Escherichia coli KO11FL putative lipoprotein YP_006164963.1 2820332 R 595495 CDS YP_006164964.1 386701127 12763131 2820918..2821004 1 NC_017660.1 expressed protein; azuC; hypothetical protein 2821004 12763131 KO11_13194 Escherichia coli KO11FL hypothetical protein YP_006164964.1 2820918 D 595495 CDS YP_006164965.1 386701128 12763132 2821119..2821370 1 NC_017660.1 yecJ; hypothetical protein 2821370 12763132 KO11_13195 Escherichia coli KO11FL hypothetical protein YP_006164965.1 2821119 D 595495 CDS YP_006164966.1 386701129 12763133 complement(2821449..2821952) 1 NC_017660.1 COG1528 Ferritin-like protein; ferritin-like protein 2821952 ftnB 12763133 ftnB Escherichia coli KO11FL ferritin-like protein YP_006164966.1 2821449 R 595495 CDS YP_006164967.1 386701130 12763134 2822749..2823738 1 NC_017660.1 COG1879 ABC-type sugar transport system, periplasmic component; L-arabinose ABC transporter substrate-binding protein 2823738 araF 12763134 araF Escherichia coli KO11FL L-arabinose ABC transporter substrate-binding protein YP_006164967.1 2822749 D 595495 CDS YP_006164968.1 386701131 12763135 2823808..2825322 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; L-arabinose transporter ATP-binding protein 2825322 araG 12763135 araG Escherichia coli KO11FL L-arabinose transporter ATP-binding protein YP_006164968.1 2823808 D 595495 CDS YP_006164969.1 386701132 12763136 2825337..2826323 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; L-arabinose transporter permease 2826323 araH 12763136 araH Escherichia coli KO11FL L-arabinose transporter permease YP_006164969.1 2825337 D 595495 CDS YP_006164970.1 386701133 12763137 2826490..2827290 1 NC_017660.1 COG1877 Trehalose-6-phosphatase; trehalose-6-phosphate phosphatase 2827290 otsB 12763137 otsB Escherichia coli KO11FL trehalose-6-phosphate phosphatase YP_006164970.1 2826490 D 595495 CDS YP_006164971.1 386701134 12763138 2827265..2828689 1 NC_017660.1 COG0380 Trehalose-6-phosphate synthase; trehalose-6-phosphate synthase 2828689 otsA 12763138 otsA Escherichia coli KO11FL trehalose-6-phosphate synthase YP_006164971.1 2827265 D 595495 CDS YP_006164972.1 386701135 12763139 complement(2828696..2829124) 1 NC_017660.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspC 2829124 uspC 12763139 uspC Escherichia coli KO11FL universal stress protein UspC YP_006164972.1 2828696 R 595495 CDS YP_006164973.1 386701136 12763140 2829904..2830254 1 NC_017660.1 transcriptional activator FlhD 2830254 flhD 12763140 flhD Escherichia coli KO11FL transcriptional activator FlhD YP_006164973.1 2829904 D 595495 CDS YP_006164974.1 386701137 12763141 2830257..2830835 1 NC_017660.1 transcriptional activator FlhC 2830835 flhC 12763141 flhC Escherichia coli KO11FL transcriptional activator FlhC YP_006164974.1 2830257 D 595495 CDS YP_006164975.1 386701138 12763142 2830962..2831849 1 NC_017660.1 COG1291 Flagellar motor component; flagellar motor protein MotA 2831849 motA 12763142 motA Escherichia coli KO11FL flagellar motor protein MotA YP_006164975.1 2830962 D 595495 CDS YP_006164976.1 386701139 12763143 2831846..2832772 1 NC_017660.1 COG1360 Flagellar motor protein; flagellar motor protein MotB 2832772 motB 12763143 motB Escherichia coli KO11FL flagellar motor protein MotB YP_006164976.1 2831846 D 595495 CDS YP_006164977.1 386701140 12763144 2832783..2834741 1 NC_017660.1 COG0643 Chemotaxis protein histidine kinase and related kinases; chemotaxis protein CheA 2834741 cheA 12763144 cheA Escherichia coli KO11FL chemotaxis protein CheA YP_006164977.1 2832783 D 595495 CDS YP_006164978.1 386701141 12763145 2834762..2835265 1 NC_017660.1 COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein 2835265 cheW 12763145 cheW Escherichia coli KO11FL purine-binding chemotaxis protein YP_006164978.1 2834762 D 595495 CDS YP_006164979.1 386701142 12763146 2835410..2837071 1 NC_017660.1 COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein II 2837071 tar 12763146 tar Escherichia coli KO11FL methyl-accepting chemotaxis protein II YP_006164979.1 2835410 D 595495 CDS YP_006164980.1 386701143 12763147 2837117..2838718 1 NC_017660.1 COG0840 Methyl-accepting chemotaxis protein; methyl-accepting protein IV 2838718 tap 12763147 tap Escherichia coli KO11FL methyl-accepting protein IV YP_006164980.1 2837117 D 595495 CDS YP_006164981.1 386701144 12763148 2838737..2839597 1 NC_017660.1 COG1352 Methylase of chemotaxis methyl-accepting proteins; chemotaxis methyltransferase CheR 2839597 cheR 12763148 cheR Escherichia coli KO11FL chemotaxis methyltransferase CheR YP_006164981.1 2838737 D 595495 CDS YP_006164982.1 386701145 12763149 2839600..2840649 1 NC_017660.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; chemotaxis-specific methylesterase 2840649 cheB 12763149 cheB Escherichia coli KO11FL chemotaxis-specific methylesterase YP_006164982.1 2839600 D 595495 CDS YP_006164983.1 386701146 12763150 2840664..2841053 1 NC_017660.1 COG0784 FOG: CheY-like receiver; chemotaxis regulatory protein CheY 2841053 cheY 12763150 cheY Escherichia coli KO11FL chemotaxis regulatory protein CheY YP_006164983.1 2840664 D 595495 CDS YP_006164984.1 386701147 12763151 2841064..2841708 1 NC_017660.1 COG3143 Chemotaxis protein; chemotaxis regulator CheZ 2841708 cheZ 12763151 cheZ Escherichia coli KO11FL chemotaxis regulator CheZ YP_006164984.1 2841064 D 595495 CDS YP_006164985.1 386701148 12763152 2841910..2843058 1 NC_017660.1 COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 2843058 flhB 12763152 flhB Escherichia coli KO11FL flagellar biosynthesis protein FlhB YP_006164985.1 2841910 D 595495 CDS YP_006164986.1 386701149 12763153 2843051..2845129 1 NC_017660.1 COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA 2845129 flhA 12763153 flhA Escherichia coli KO11FL flagellar biosynthesis protein FlhA YP_006164986.1 2843051 D 595495 CDS YP_006164987.1 386701150 12763154 2845129..2845521 1 NC_017660.1 flagellar protein FlhE 2845521 flhE 12763154 flhE Escherichia coli KO11FL flagellar protein FlhE YP_006164987.1 2845129 D 595495 CDS YP_006164988.1 386701151 12763155 complement(2845641..2846129) 1 NC_017660.1 COG3755 Uncharacterized protein conserved in bacteria; yecT; hypothetical protein 2846129 12763155 KO11_13310 Escherichia coli KO11FL hypothetical protein YP_006164988.1 2845641 R 595495 CDS YP_006164989.1 386701152 12763156 complement(2846306..2848039) 1 NC_017660.1 COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase 2848039 argS 12763156 argS Escherichia coli KO11FL arginyl-tRNA synthetase YP_006164989.1 2846306 R 595495 CDS YP_006164990.1 386701153 12763157 2848255..2848821 1 NC_017660.1 COG3102 Uncharacterized protein conserved in bacteria; yecM; hypothetical protein 2848821 12763157 KO11_13320 Escherichia coli KO11FL hypothetical protein YP_006164990.1 2848255 D 595495 CDS YP_006164991.1 386701154 12763158 2848835..2849581 1 NC_017660.1 COG3142 Uncharacterized protein involved in copper resistance; copper homeostasis protein CutC 2849581 cutC 12763158 cutC Escherichia coli KO11FL copper homeostasis protein CutC YP_006164991.1 2848835 D 595495 CDS YP_006164992.1 386701155 12763159 2849969..2851069 1 NC_017660.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; TMAO reductase III (TorYZ), cytochrome c-type subunit TorY 2851069 torY 12763159 torY Escherichia coli KO11FL TMAO reductase III (TorYZ), cytochrome c-type subunit TorY YP_006164992.1 2849969 D 595495 CDS YP_006164993.1 386701156 12763160 2851094..2853523 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; trimethylamine N-oxide reductase system III, catalytic subunit TorZ 2853523 torZ 12763160 torZ Escherichia coli KO11FL trimethylamine N-oxide reductase system III, catalytic subunit TorZ YP_006164993.1 2851094 D 595495 CDS YP_006164994.1 386701157 12763161 complement(2853688..2854659) 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; tRNA mo(5)U34 methyltransferase 2854659 cmoB 12763161 cmoB Escherichia coli KO11FL tRNA mo(5)U34 methyltransferase YP_006164994.1 2853688 R 595495 CDS YP_006164995.1 386701158 12763162 complement(2854656..2855399) 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; tRNA cmo(5)U34 methyltransferase 2855399 cmoA 12763162 cmoA Escherichia coli KO11FL tRNA cmo(5)U34 methyltransferase YP_006164995.1 2854656 R 595495 CDS YP_006164996.1 386701159 12763163 complement(2855440..2855835) 1 NC_017660.1 COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily; putative inner membrane protein 2855835 yecN 12763163 yecN Escherichia coli KO11FL putative inner membrane protein YP_006164996.1 2855440 R 595495 CDS YP_006164997.1 386701160 12763164 complement(2855888..2856706) 1 NC_017660.1 COG1801 Uncharacterized conserved protein; yecE; hypothetical protein 2856706 12763164 KO11_13355 Escherichia coli KO11FL hypothetical protein YP_006164997.1 2855888 R 595495 CDS YP_006164998.1 386701161 12763165 complement(2856703..2857269) 1 NC_017660.1 COG1335 Amidases related to nicotinamidase; putative hydrolase 2857269 yecD 12763165 yecD Escherichia coli KO11FL putative hydrolase YP_006164998.1 2856703 R 595495 CDS YP_006164999.1 386701162 12763166 2857579..2859351 1 NC_017660.1 COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 2859351 aspS 12763166 aspS Escherichia coli KO11FL aspartyl-tRNA synthetase YP_006164999.1 2857579 D 595495 CDS YP_006165000.1 386701163 12763167 2859412..2859921 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; dihydroneopterin triphosphate pyrophosphatase 2859921 nudB 12763167 nudB Escherichia coli KO11FL dihydroneopterin triphosphate pyrophosphatase YP_006165000.1 2859412 D 595495 CDS YP_006165001.1 386701164 12763168 2859950..2860690 1 NC_017660.1 COG0217 Uncharacterized conserved protein; yebC; hypothetical protein 2860690 12763168 KO11_13375 Escherichia coli KO11FL hypothetical protein YP_006165001.1 2859950 D 595495 CDS YP_006165002.1 386701165 12763169 2860725..2861246 1 NC_017660.1 COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase 2861246 ruvC 12763169 ruvC Escherichia coli KO11FL Holliday junction resolvase YP_006165002.1 2860725 D 595495 CDS YP_006165003.1 386701166 12763170 complement(2861248..2861850) 1 NC_017660.1 yebB; hypothetical protein 2861850 12763170 KO11_13385 Escherichia coli KO11FL hypothetical protein YP_006165003.1 2861248 R 595495 CDS YP_006165004.1 386701167 12763171 2862125..2862736 1 NC_017660.1 COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA 2862736 ruvA 12763171 ruvA Escherichia coli KO11FL Holliday junction DNA helicase RuvA YP_006165004.1 2862125 D 595495 CDS YP_006165005.1 386701168 12763172 2862745..2863755 1 NC_017660.1 COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB 2863755 ruvB 12763172 ruvB Escherichia coli KO11FL Holliday junction DNA helicase RuvB YP_006165005.1 2862745 D 595495 CDS YP_006165006.1 386701169 12763173 2864023..2865003 1 NC_017660.1 COG3547 Transposase and inactivated derivatives; putative IS621 transposase 2865003 12763173 KO11_13400 Escherichia coli KO11FL putative IS621 transposase YP_006165006.1 2864023 D 595495 CDS YP_006165007.1 386701170 12763174 complement(2865182..2865967) 1 NC_017660.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; high-affinity zinc transporter membrane protein 2865967 znuB 12763174 znuB Escherichia coli KO11FL high-affinity zinc transporter membrane protein YP_006165007.1 2865182 R 595495 CDS YP_006165008.1 386701171 12763175 complement(2865964..2866719) 1 NC_017660.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component; high-affinity zinc transporter ATPase 2866719 znuC 12763175 znuC Escherichia coli KO11FL high-affinity zinc transporter ATPase YP_006165008.1 2865964 R 595495 CDS YP_006165009.1 386701172 12763176 2866798..2867730 1 NC_017660.1 COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin; high-affinity zinc transporter periplasmic protein 2867730 znuA 12763176 znuA Escherichia coli KO11FL high-affinity zinc transporter periplasmic protein YP_006165009.1 2866798 D 595495 CDS YP_006165010.1 386701173 12763177 2867746..2869068 1 NC_017660.1 COG0739 Membrane proteins related to metalloendopeptidases; putative peptidase 2869068 yebA 12763177 yebA Escherichia coli KO11FL putative peptidase YP_006165010.1 2867746 D 595495 CDS YP_006165011.1 386701174 12763178 2869188..2870159 1 NC_017660.1 COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2870159 lpxM 12763178 lpxM Escherichia coli KO11FL lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_006165011.1 2869188 D 595495 CDS YP_006165012.1 386701175 12763179 complement(2870291..2871733) 1 NC_017660.1 COG0469 Pyruvate kinase; pyruvate kinase 2871733 pykA 12763179 pykA Escherichia coli KO11FL pyruvate kinase YP_006165012.1 2870291 R 595495 CDS YP_006165013.1 386701176 12763180 complement(2871861..2872730) 1 NC_017660.1 COG1737 Transcriptional regulators; DNA-binding transcriptional regulator HexR 2872730 yebK 12763180 yebK Escherichia coli KO11FL DNA-binding transcriptional regulator HexR YP_006165013.1 2871861 R 595495 CDS YP_006165014.1 386701177 12763181 2872753..2872902 1 NC_017660.1 hypothetical protein 2872902 12763181 KO11_13440 Escherichia coli KO11FL hypothetical protein YP_006165014.1 2872753 D 595495 CDS YP_006165015.1 386701178 12763182 2873068..2874543 1 NC_017660.1 COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2874543 zwf 12763182 zwf Escherichia coli KO11FL glucose-6-phosphate 1-dehydrogenase YP_006165015.1 2873068 D 595495 CDS YP_006165016.1 386701179 12763183 2874778..2876589 1 NC_017660.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase 2876589 edd 12763183 edd Escherichia coli KO11FL phosphogluconate dehydratase YP_006165016.1 2874778 D 595495 CDS YP_006165017.1 386701180 12763184 2876626..2877267 1 NC_017660.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2877267 eda 12763184 eda Escherichia coli KO11FL keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_006165017.1 2876626 D 595495 CDS YP_006165018.1 386701181 12763185 complement(2877323..2878501) 1 NC_017660.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase); phosphoribosylglycinamide formyltransferase 2 2878501 purT 12763185 purT Escherichia coli KO11FL phosphoribosylglycinamide formyltransferase 2 YP_006165018.1 2877323 R 595495 CDS YP_006165019.1 386701182 12763186 2878635..2878925 1 NC_017660.1 COG3141 Uncharacterized protein conserved in bacteria; DNA damage-inducible protein YebG 2878925 yebG 12763186 yebG Escherichia coli KO11FL DNA damage-inducible protein YebG YP_006165019.1 2878635 D 595495 CDS YP_006165020.1 386701183 12763187 2878992..2879348 1 NC_017660.1 yebF; hypothetical protein 2879348 12763187 KO11_13470 Escherichia coli KO11FL hypothetical protein YP_006165020.1 2878992 D 595495 CDS YP_006165021.1 386701184 12763188 complement(2879504..2879614) 1 NC_017660.1 hypothetical protein 2879614 12763188 KO11_13475 Escherichia coli KO11FL hypothetical protein YP_006165021.1 2879504 R 595495 CDS YP_006165022.1 386701185 12763189 2879674..2880333 1 NC_017660.1 COG2979 Uncharacterized protein conserved in bacteria; yebE; hypothetical protein 2880333 12763189 KO11_13480 Escherichia coli KO11FL hypothetical protein YP_006165022.1 2879674 D 595495 CDS YP_006165023.1 386701186 12763190 2880542..2882602 1 NC_017660.1 COG1770 Protease II; protease 2 2882602 ptrB 12763190 ptrB Escherichia coli KO11FL protease 2 YP_006165023.1 2880542 D 595495 CDS YP_006165024.1 386701187 12763191 complement(2882599..2883261) 1 NC_017660.1 COG0847 DNA polymerase III, epsilon subunit and related 3-5 exonucleases; exodeoxyribonuclease X 2883261 exoX 12763191 exoX Escherichia coli KO11FL exodeoxyribonuclease X YP_006165024.1 2882599 R 595495 CDS YP_006165025.1 386701188 12763192 complement(2883285..2883941) 1 NC_017660.1 COG0388 Predicted amidohydrolase; carbon-nitrogen family hydrolase 2883941 yobB 12763192 yobB Escherichia coli KO11FL carbon-nitrogen family hydrolase YP_006165025.1 2883285 R 595495 CDS YP_006165026.1 386701189 12763193 complement(2884043..2884273) 1 NC_017660.1 DNA polymerase III subunit theta 2884273 holE 12763193 holE Escherichia coli KO11FL DNA polymerase III subunit theta YP_006165026.1 2884043 R 595495 CDS YP_006165027.1 386701190 12763194 2884412..2884786 1 NC_017660.1 COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC; yobA; hypothetical protein 2884786 12763194 KO11_13505 Escherichia coli KO11FL hypothetical protein YP_006165027.1 2884412 D 595495 CDS YP_006165028.1 386701191 12763195 2884790..2885662 1 NC_017660.1 COG1276 Putative copper export protein; copper resistance protein D 2885662 yebZ 12763195 yebZ Escherichia coli KO11FL copper resistance protein D YP_006165028.1 2884790 D 595495 CDS YP_006165029.1 386701192 12763196 2885675..2886016 1 NC_017660.1 yebY; hypothetical protein 2886016 12763196 KO11_13515 Escherichia coli KO11FL hypothetical protein YP_006165029.1 2885675 D 595495 CDS YP_006165030.1 386701193 12763197 2886412..2887068 1 NC_017660.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; serine/threonine protein phosphatase 1 2887068 pphA 12763197 pphA Escherichia coli KO11FL serine/threonine protein phosphatase 1 YP_006165030.1 2886412 D 595495 CDS YP_006165031.1 386701194 12763198 complement(2887069..2887344) 1 NC_017660.1 yebW; hypothetical protein 2887344 12763198 KO11_13530 Escherichia coli KO11FL hypothetical protein YP_006165031.1 2887069 R 595495 CDS YP_006165032.1 386701195 12763199 complement(2887365..2887601) 1 NC_017660.1 yebV; hypothetical protein 2887601 12763199 KO11_13535 Escherichia coli KO11FL hypothetical protein YP_006165032.1 2887365 R 595495 CDS YP_006165033.1 386701196 12763200 complement(2887719..2889164) 1 NC_017660.1 COG0144 tRNA and rRNA cytosine-C5-methylases; rRNA (cytosine-C(5)-)-methyltransferase RsmF 2889164 rsmF 12763200 rsmF Escherichia coli KO11FL rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_006165033.1 2887719 R 595495 CDS YP_006165034.1 386701197 12763201 complement(2889238..2891871) 1 NC_017660.1 COG3008 Paraquat-inducible protein B; mce-like protein 2891871 yebT 12763201 yebT Escherichia coli KO11FL mce-like protein YP_006165034.1 2889238 R 595495 CDS YP_006165035.1 386701198 12763202 complement(2891840..2893123) 1 NC_017660.1 COG2995 Uncharacterized paraquat-inducible protein A; yebS; hypothetical protein 2893123 12763202 KO11_13550 Escherichia coli KO11FL hypothetical protein YP_006165035.1 2891840 R 595495 CDS YP_006165036.1 386701199 12763203 2893253..2893750 1 NC_017660.1 COG1956 GAF domain-containing protein; yebR; hypothetical protein 2893750 12763203 KO11_13555 Escherichia coli KO11FL hypothetical protein YP_006165036.1 2893253 D 595495 CDS YP_006165037.1 386701200 12763204 2893847..2894545 1 NC_017660.1 COG3109 Activator of osmoprotectant transporter ProP; ProP expression regulator 2894545 proQ 12763204 proQ Escherichia coli KO11FL ProP expression regulator YP_006165037.1 2893847 D 595495 CDS YP_006165038.1 386701201 12763205 2894565..2896613 1 NC_017660.1 COG0793 Periplasmic protease; carboxy-terminal protease 2896613 prc 12763205 prc Escherichia coli KO11FL carboxy-terminal protease YP_006165038.1 2894565 D 595495 CDS YP_006165039.1 386701202 12763206 2896808..2897686 1 NC_017660.1 COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 2897686 htpX 12763206 htpX Escherichia coli KO11FL heat shock protein HtpX YP_006165039.1 2896808 D 595495 CDS YP_006165040.1 386701203 12763207 complement(2897732..2899105) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transport protein 2899105 yebQ 12763207 yebQ Escherichia coli KO11FL putative transport protein YP_006165040.1 2897732 R 595495 CDS YP_006165041.1 386701204 12763208 2899282..2900073 1 NC_017660.1 COG1414 Transcriptional regulator; DNA-binding transcriptional regulator KdgR 2900073 kdgR 12763208 kdgR Escherichia coli KO11FL DNA-binding transcriptional regulator KdgR YP_006165041.1 2899282 D 595495 CDS YP_006165042.1 386701205 12763209 2900614..2900757 1 NC_017660.1 PhoPQ regulatory protein 2900757 mgrB 12763209 mgrB Escherichia coli KO11FL PhoPQ regulatory protein YP_006165042.1 2900614 D 595495 CDS YP_006165043.1 386701206 12763210 2900832..2901119 1 NC_017660.1 yebO; hypothetical protein 2901119 12763210 KO11_13590 Escherichia coli KO11FL hypothetical protein YP_006165043.1 2900832 D 595495 CDS YP_006165044.1 386701207 12763211 2901789..2901932 1 NC_017660.1 yobF; hypothetical protein 2901932 12763211 KO11_13595 Escherichia coli KO11FL hypothetical protein YP_006165044.1 2901789 D 595495 CDS YP_006165045.1 386701208 12763212 2901945..2902154 1 NC_017660.1 COG1278 Cold shock proteins; cold shock-like protein cspc 2902154 cspC 12763212 cspC Escherichia coli KO11FL cold shock-like protein cspc YP_006165045.1 2901945 D 595495 CDS YP_006165046.1 386701209 12763213 2902320..2903129 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; 23S rRNA methyltransferase A 2903129 rrmA 12763213 rrmA Escherichia coli KO11FL 23S rRNA methyltransferase A YP_006165046.1 2902320 D 595495 CDS YP_006165047.1 386701210 12763214 complement(2903126..2903692) 1 NC_017660.1 COG1971 Predicted membrane protein; yebN; hypothetical protein 2903692 12763214 KO11_13610 Escherichia coli KO11FL hypothetical protein YP_006165047.1 2903126 R 595495 CDS YP_006165048.1 386701211 12763215 complement(2904121..2904579) 1 NC_017660.1 COG4811 Predicted membrane protein; yobD; hypothetical protein 2904579 12763215 KO11_13615 Escherichia coli KO11FL hypothetical protein YP_006165048.1 2904121 R 595495 CDS YP_006165049.1 386701212 12763216 complement(2904634..2905485) 1 NC_017660.1 COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; PTS system mannose-specific transporter subunit IID 2905485 manZ 12763216 manZ Escherichia coli KO11FL PTS system mannose-specific transporter subunit IID YP_006165049.1 2904634 R 595495 CDS YP_006165050.1 386701213 12763217 complement(2905498..2906298) 1 NC_017660.1 COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; PTS system mannose-specific transporter subunit IIC 2906298 manY 12763217 manY Escherichia coli KO11FL PTS system mannose-specific transporter subunit IIC YP_006165050.1 2905498 R 595495 CDS YP_006165051.1 386701214 12763218 complement(2906361..2907332) 1 NC_017660.1 COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; PTS system mannose-specific transporter subunit IIAB 2907332 manX 12763218 manX Escherichia coli KO11FL PTS system mannose-specific transporter subunit IIAB YP_006165051.1 2906361 R 595495 CDS YP_006165052.1 386701215 12763219 2907795..2909351 1 NC_017660.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance; yoaE; hypothetical protein 2909351 12763219 KO11_13635 Escherichia coli KO11FL hypothetical protein YP_006165052.1 2907795 D 595495 CDS YP_006165053.1 386701216 12763220 complement(2909355..2910953) 1 NC_017660.1 COG2200 FOG: EAL domain; putative phosphodiesterase 2910953 adrB 12763220 adrB Escherichia coli KO11FL putative phosphodiesterase YP_006165053.1 2909355 R 595495 CDS YP_006165054.1 386701217 12763221 complement(2911084..2912448) 1 NC_017660.1 COG1760 L-serine deaminase; L-serine deaminase 2912448 sdaA 12763221 sdaA Escherichia coli KO11FL L-serine deaminase YP_006165054.1 2911084 R 595495 CDS YP_006165055.1 386701218 12763222 complement(2912632..2913210) 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; putative NUDIX hydrolase 2913210 nudL 12763222 nudL Escherichia coli KO11FL putative NUDIX hydrolase YP_006165055.1 2912632 R 595495 CDS YP_006165056.1 386701219 12763223 complement(2913214..2914575) 1 NC_017660.1 COG0147 Anthranilate/para-aminobenzoate synthases component I; aminodeoxychorismate synthase subunit I 2914575 pabB 12763223 pabB Escherichia coli KO11FL aminodeoxychorismate synthase subunit I YP_006165056.1 2913214 R 595495 CDS YP_006165057.1 386701220 12763224 2914649..2914828 1 NC_017660.1 COG3140 Uncharacterized protein conserved in bacteria; yoaH; hypothetical protein 2914828 12763224 KO11_13660 Escherichia coli KO11FL hypothetical protein YP_006165057.1 2914649 D 595495 CDS YP_006165058.1 386701221 12763225 complement(2914948..2915247) 1 NC_017660.1 yoaC; hypothetical protein 2915247 12763225 KO11_13665 Escherichia coli KO11FL hypothetical protein YP_006165058.1 2914948 R 595495 CDS YP_006165059.1 386701222 12763226 complement(2915670..2916014) 1 NC_017660.1 COG0251 Putative translation initiation inhibitor, yjgF family; yoaB; hypothetical protein 2916014 12763226 KO11_13670 Escherichia coli KO11FL hypothetical protein YP_006165059.1 2915670 R 595495 CDS YP_006165060.1 386701223 12763227 2916146..2918056 1 NC_017660.1 COG1199 Rad3-related DNA helicases; Helicase c2 2918056 yoaA 12763227 yoaA Escherichia coli KO11FL Helicase c2 YP_006165060.1 2916146 D 595495 CDS YP_006165061.1 386701224 12763228 2918114..2918809 1 NC_017660.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; putative peptidase 2918809 yeaZ 12763228 yeaZ Escherichia coli KO11FL putative peptidase YP_006165061.1 2918114 D 595495 CDS YP_006165062.1 386701225 12763229 2918849..2919430 1 NC_017660.1 COG3065 Starvation-inducible outer membrane lipoprotein; outer membrane lipoprotein 2919430 yeaY 12763229 yeaY Escherichia coli KO11FL outer membrane lipoprotein YP_006165062.1 2918849 D 595495 CDS YP_006165063.1 386701226 12763230 2919569..2921320 1 NC_017660.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long-chain-fatty-acid--CoA ligase 2921320 fadD 12763230 fadD Escherichia coli KO11FL long-chain-fatty-acid--CoA ligase YP_006165063.1 2919569 D 595495 CDS YP_006165064.1 386701227 12763231 2921402..2922517 1 NC_017660.1 COG0349 Ribonuclease D; ribonuclease D 2922517 rnd 12763231 rnd Escherichia coli KO11FL ribonuclease D YP_006165064.1 2921402 D 595495 CDS YP_006165065.1 386701228 12763232 complement(2922571..2923536) 1 NC_017660.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; putative oxidoreductase 2923536 yeaX 12763232 yeaX Escherichia coli KO11FL putative oxidoreductase YP_006165065.1 2922571 R 595495 CDS YP_006165066.1 386701229 12763233 complement(2923592..2924716) 1 NC_017660.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit; putative dioxygenase subunit alpha yeaW 2924716 yeaW 12763233 yeaW Escherichia coli KO11FL putative dioxygenase subunit alpha yeaW YP_006165066.1 2923592 R 595495 CDS YP_006165067.1 386701230 12763234 complement(2924748..2926358) 1 NC_017660.1 COG1292 Choline-glycine betaine transporter; putative transporter 2926358 yeaV 12763234 yeaV Escherichia coli KO11FL putative transporter YP_006165067.1 2924748 R 595495 CDS YP_006165068.1 386701231 12763235 complement(2926609..2927694) 1 NC_017660.1 COG0473 Isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 2927694 dmlA 12763235 dmlA Escherichia coli KO11FL tartrate dehydrogenase YP_006165068.1 2926609 R 595495 CDS YP_006165069.1 386701232 12763236 2927776..2928720 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 2928720 dmlR 12763236 dmlR Escherichia coli KO11FL LysR family transcriptional regulator YP_006165069.1 2927776 D 595495 CDS YP_006165070.1 386701233 12763237 2928847..2929485 1 NC_017660.1 COG1280 Putative threonine efflux protein; leucine export protein LeuE 2929485 yeaS 12763237 yeaS Escherichia coli KO11FL leucine export protein LeuE YP_006165070.1 2928847 D 595495 CDS YP_006165071.1 386701234 12763238 2929658..2930017 1 NC_017660.1 COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance; yeaR; hypothetical protein 2930017 12763238 KO11_13730 Escherichia coli KO11FL hypothetical protein YP_006165071.1 2929658 D 595495 CDS YP_006165072.1 386701235 12763239 2930021..2930209 1 NC_017660.1 yoaG; hypothetical protein 2930209 12763239 KO11_13735 Escherichia coli KO11FL hypothetical protein YP_006165072.1 2930021 D 595495 CDS YP_006165073.1 386701236 12763240 complement(2930225..2930656) 1 NC_017660.1 COG1943 Transposase and inactivated derivatives; putative IS609 transposase TnpA 2930656 12763240 KO11_13740 Escherichia coli KO11FL putative IS609 transposase TnpA YP_006165073.1 2930225 R 595495 CDS YP_006165074.1 386701237 12763241 2930724..2931872 1 NC_017660.1 COG0675 Transposase and inactivated derivatives; putative IS609 transposase TnpB 2931872 ydcM 12763241 ydcM Escherichia coli KO11FL putative IS609 transposase TnpB YP_006165074.1 2930724 D 595495 CDS YP_006165075.1 386701238 12763242 2932100..2932348 1 NC_017660.1 COG2261 Predicted membrane protein; yeaQ; hypothetical protein 2932348 12763242 KO11_13750 Escherichia coli KO11FL hypothetical protein YP_006165075.1 2932100 D 595495 CDS YP_006165076.1 386701239 12763243 complement(2932615..2933640) 1 NC_017660.1 COG2199 FOG: GGDEF domain; putative diguanylate cyclase 2933640 yeaP 12763243 yeaP Escherichia coli KO11FL putative diguanylate cyclase YP_006165076.1 2932615 R 595495 CDS YP_006165077.1 386701240 12763244 2933823..2934077 1 NC_017660.1 COG3042 Putative hemolysin; putative lipoprotein 2934077 yoaF 12763244 yoaF Escherichia coli KO11FL putative lipoprotein YP_006165077.1 2933823 D 595495 CDS YP_006165078.1 386701241 12763245 complement(2934099..2934446) 1 NC_017660.1 COG3189 Uncharacterized conserved protein; yeaO; hypothetical protein 2934446 12763245 KO11_13765 Escherichia coli KO11FL hypothetical protein YP_006165078.1 2934099 R 595495 CDS YP_006165079.1 386701242 12763246 complement(2934501..2935682) 1 NC_017660.1 COG2807 Cyanate permease; putative transporter 2935682 yeaN 12763246 yeaN Escherichia coli KO11FL putative transporter YP_006165079.1 2934501 R 595495 CDS YP_006165080.1 386701243 12763247 2935779..2936600 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator, ARAC-type 2936600 yeaM 12763247 yeaM Escherichia coli KO11FL putative DNA-binding transcriptional regulator, ARAC-type YP_006165080.1 2935779 D 595495 CDS YP_006165081.1 386701244 12763248 complement(2936557..2937003) 1 NC_017660.1 COG2707 Predicted membrane protein; yeaL; hypothetical protein 2937003 12763248 KO11_13780 Escherichia coli KO11FL hypothetical protein YP_006165081.1 2936557 R 595495 CDS YP_006165082.1 386701245 12763249 2937173..2937277 1 NC_017660.1 yoaI; hypothetical protein 2937277 12763249 KO11_13785 Escherichia coli KO11FL hypothetical protein YP_006165082.1 2937173 D 595495 CDS YP_006165083.1 386701246 12763250 complement(2937278..2937781) 1 NC_017660.1 COG2606 Uncharacterized conserved protein; yeaK; hypothetical protein 2937781 12763250 KO11_13790 Escherichia coli KO11FL hypothetical protein YP_006165083.1 2937278 R 595495 CDS YP_006165084.1 386701247 12763251 complement(2937824..2939314) 1 NC_017660.1 COG2199 FOG: GGDEF domain; putative diguanylate cyclase 2939314 yeaJ 12763251 yeaJ Escherichia coli KO11FL putative diguanylate cyclase YP_006165084.1 2937824 R 595495 CDS YP_006165085.1 386701248 12763252 complement(2939495..2940970) 1 NC_017660.1 COG2199 FOG: GGDEF domain; putative diguanylate cyclase 2940970 yeaI 12763252 yeaI Escherichia coli KO11FL putative diguanylate cyclase YP_006165085.1 2939495 R 595495 CDS YP_006165086.1 386701249 12763253 complement(2941117..2942400) 1 NC_017660.1 COG2718 Uncharacterized conserved protein; yeaH; hypothetical protein 2942400 12763253 KO11_13805 Escherichia coli KO11FL hypothetical protein YP_006165086.1 2941117 R 595495 CDS YP_006165087.1 386701250 12763254 complement(2942513..2944447) 1 NC_017660.1 COG2766 Putative Ser protein kinase; PrkA family serine protein kinase 2944447 yeaG 12763254 yeaG Escherichia coli KO11FL PrkA family serine protein kinase YP_006165087.1 2942513 R 595495 CDS YP_006165088.1 386701251 12763255 2944883..2945629 1 NC_017660.1 COG3713 Outer membrane protein V; MltA-interacting protein 2945629 mipA 12763255 mipA Escherichia coli KO11FL MltA-interacting protein YP_006165088.1 2944883 D 595495 CDS YP_006165089.1 386701252 12763256 2945719..2946573 1 NC_017660.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase; putative oxidoreductase 2946573 yeaE 12763256 yeaE Escherichia coli KO11FL putative oxidoreductase YP_006165089.1 2945719 D 595495 CDS YP_006165090.1 386701253 12763257 complement(2946624..2947508) 1 NC_017660.1 COG0676 Uncharacterized enzymes related to aldose 1-epimerase; aldose 1-epimerase 2947508 yeaD 12763257 yeaD Escherichia coli KO11FL aldose 1-epimerase YP_006165090.1 2946624 R 595495 CDS YP_006165091.1 386701254 12763258 complement(2947591..2948586) 1 NC_017660.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2948586 gapA 12763258 gapA Escherichia coli KO11FL glyceraldehyde-3-phosphate dehydrogenase YP_006165091.1 2947591 R 595495 CDS YP_006165092.1 386701255 12763259 2948928..2949341 1 NC_017660.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; methionine sulfoxide reductase B 2949341 msrB 12763259 msrB Escherichia coli KO11FL methionine sulfoxide reductase B YP_006165092.1 2948928 D 595495 CDS YP_006165093.1 386701256 12763260 2949383..2949655 1 NC_017660.1 COG3139 Uncharacterized protein conserved in bacteria; yeaC; hypothetical protein 2949655 12763260 KO11_13840 Escherichia coli KO11FL hypothetical protein YP_006165093.1 2949383 D 595495 CDS YP_006165094.1 386701257 12763261 2950025..2950372 1 NC_017660.1 interrupted by frameshift; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; alcohol dehydrogenase 2950372 ydjL_2 12763261 ydjL_2 Escherichia coli KO11FL alcohol dehydrogenase YP_006165094.1 2950025 D 595495 CDS YP_006165095.1 386701258 12763262 2950326..2951102 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein 2951102 ydjL_1 12763262 ydjL_1 Escherichia coli KO11FL putative oxidoreductase, Zn-dependent and NAD(P)-binding protein YP_006165095.1 2950326 D 595495 CDS YP_006165096.1 386701259 12763263 2951129..2952508 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter, MFS superfamily protein 2952508 ydjK 12763263 ydjK Escherichia coli KO11FL putative transporter, MFS superfamily protein YP_006165096.1 2951129 D 595495 CDS YP_006165097.1 386701260 12763264 2952525..2953568 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative iditol dehydrogenase 2953568 ydjJ 12763264 ydjJ Escherichia coli KO11FL putative iditol dehydrogenase YP_006165097.1 2952525 D 595495 CDS YP_006165098.1 386701261 12763265 2953589..2954425 1 NC_017660.1 COG0191 Fructose/tagatose bisphosphate aldolase; putative aldolase 2954425 ydjI 12763265 ydjI Escherichia coli KO11FL putative aldolase YP_006165098.1 2953589 D 595495 CDS YP_006165099.1 386701262 12763266 2954430..2955377 1 NC_017660.1 COG0524 Sugar kinases, ribokinase family; putative kinase 2955377 ydjH 12763266 ydjH Escherichia coli KO11FL putative kinase YP_006165099.1 2954430 D 595495 CDS YP_006165100.1 386701263 12763267 2955387..2956367 1 NC_017660.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative oxidoreductase 2956367 ydjG 12763267 ydjG Escherichia coli KO11FL putative oxidoreductase YP_006165100.1 2955387 D 595495 CDS YP_006165101.1 386701264 12763268 2956504..2957262 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; putative DEOR-type transcriptional regulator 2957262 ydjF 12763268 ydjF Escherichia coli KO11FL putative DEOR-type transcriptional regulator YP_006165101.1 2956504 D 595495 CDS YP_006165102.1 386701265 12763269 2957379..2958737 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter, MFS superfamily protein 2958737 ydjE 12763269 ydjE Escherichia coli KO11FL putative transporter, MFS superfamily protein YP_006165102.1 2957379 D 595495 CDS YP_006165103.1 386701266 12763270 complement(2958830..2959471) 1 NC_017660.1 COG1335 Amidases related to nicotinamidase; nicotinamidase/pyrazinamidase 2959471 pncA 12763270 pncA Escherichia coli KO11FL nicotinamidase/pyrazinamidase YP_006165103.1 2958830 R 595495 CDS YP_006165104.1 386701267 12763271 complement(2959482..2960498) 1 NC_017660.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; asparaginase 2960498 ansA 12763271 ansA Escherichia coli KO11FL asparaginase YP_006165104.1 2959482 R 595495 CDS YP_006165105.1 386701268 12763272 complement(2960665..2962521) 1 NC_017660.1 COG0616 Periplasmic serine proteases (ClpP class); protease 4 2962521 sppA 12763272 sppA Escherichia coli KO11FL protease 4 YP_006165105.1 2960665 R 595495 CDS YP_006165106.1 386701269 12763273 2962682..2963233 1 NC_017660.1 COG0778 Nitroreductase; putative oxidoreductase 2963233 ydjA 12763273 ydjA Escherichia coli KO11FL putative oxidoreductase YP_006165106.1 2962682 D 595495 CDS YP_006165107.1 386701270 12763274 2963350..2964393 1 NC_017660.1 COG0709 Selenophosphate synthase; selenophosphate synthetase 2964393 selD 12763274 selD Escherichia coli KO11FL selenophosphate synthetase YP_006165107.1 2963350 D 595495 CDS YP_006165108.1 386701271 12763275 2964398..2966359 1 NC_017660.1 COG0550 Topoisomerase IA; DNA topoisomerase III 2966359 topB 12763275 topB Escherichia coli KO11FL DNA topoisomerase III YP_006165108.1 2964398 D 595495 CDS YP_006165109.1 386701272 12763276 2966487..2967527 1 NC_017660.1 ynjI; hypothetical protein 2967527 12763276 KO11_13920 Escherichia coli KO11FL hypothetical protein YP_006165109.1 2966487 D 595495 CDS YP_006165110.1 386701273 12763277 complement(2967644..2968987) 1 NC_017660.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 2968987 gdhA 12763277 gdhA Escherichia coli KO11FL glutamate dehydrogenase YP_006165110.1 2967644 R 595495 CDS YP_006165111.1 386701274 12763278 2969223..2969495 1 NC_017660.1 ynjH; hypothetical protein 2969495 12763278 KO11_13930 Escherichia coli KO11FL hypothetical protein YP_006165111.1 2969223 D 595495 CDS YP_006165112.1 386701275 12763279 complement(2969461..2969868) 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 2969868 nudG 12763279 nudG Escherichia coli KO11FL pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YP_006165112.1 2969461 R 595495 CDS YP_006165113.1 386701276 12763280 2969955..2970575 1 NC_017660.1 COG0558 Phosphatidylglycerophosphate synthase; putative cytochrome oxidase 2970575 ynjF 12763280 ynjF Escherichia coli KO11FL putative cytochrome oxidase YP_006165113.1 2969955 D 595495 CDS YP_006165114.1 386701277 12763282 complement(2971958..2972611) 1 NC_017660.1 COG4136 ABC-type uncharacterized transport system, ATPase component; putative transporter subunit 2972611 ynjD 12763282 ynjD Escherichia coli KO11FL putative transporter subunit YP_006165114.1 2971958 R 595495 CDS YP_006165115.1 386701278 12763283 complement(2972611..2974146) 1 NC_017660.1 COG4135 ABC-type uncharacterized transport system, permease component; fused transporter subunits of ABC superfamily: membrane components 2974146 ynjC 12763283 ynjC Escherichia coli KO11FL fused transporter subunits of ABC superfamily: membrane components YP_006165115.1 2972611 R 595495 CDS YP_006165116.1 386701279 12763284 complement(2974119..2975285) 1 NC_017660.1 COG4134 ABC-type uncharacterized transport system, periplasmic component; ynjB; hypothetical protein 2975285 12763284 KO11_13960 Escherichia coli KO11FL hypothetical protein YP_006165116.1 2974119 R 595495 CDS YP_006165117.1 386701280 12763285 complement(2975295..2975843) 1 NC_017660.1 COG2128 Uncharacterized conserved protein; carboxymuconolactone decarboxylase family protein 2975843 ynjA 12763285 ynjA Escherichia coli KO11FL carboxymuconolactone decarboxylase family protein YP_006165117.1 2975295 R 595495 CDS YP_006165118.1 386701281 12763286 complement(2975843..2976547) 1 NC_017660.1 COG0398 Uncharacterized conserved protein; ydjZ; hypothetical protein 2976547 12763286 KO11_13970 Escherichia coli KO11FL hypothetical protein YP_006165118.1 2975843 R 595495 CDS YP_006165119.1 386701282 12763287 complement(2976565..2977242) 1 NC_017660.1 ydjY; hypothetical protein 2977242 12763287 KO11_13975 Escherichia coli KO11FL hypothetical protein YP_006165119.1 2976565 R 595495 CDS YP_006165120.1 386701283 12763288 complement(2977247..2977957) 1 NC_017660.1 COG0398 Uncharacterized conserved protein; ydjX; hypothetical protein 2977957 12763288 KO11_13980 Escherichia coli KO11FL hypothetical protein YP_006165120.1 2977247 R 595495 CDS YP_006165121.1 386701284 12763289 complement(2978124..2978930) 1 NC_017660.1 COG0708 Exonuclease III; exonuclease III 2978930 xthA 12763289 xthA Escherichia coli KO11FL exonuclease III YP_006165121.1 2978124 R 595495 CDS YP_006165122.1 386701285 12763290 2979018..2979116 1 NC_017660.1 hypothetical protein 2979116 12763290 KO11_13990 Escherichia coli KO11FL hypothetical protein YP_006165122.1 2979018 D 595495 CDS YP_006165123.1 386701286 12763291 2979376..2980596 1 NC_017660.1 COG4992 Ornithine/acetylornithine aminotransferase; bifunctional succinylornithine transaminase/acetylornithine transaminase 2980596 astC 12763291 astC Escherichia coli KO11FL bifunctional succinylornithine transaminase/acetylornithine transaminase YP_006165123.1 2979376 D 595495 CDS YP_006165124.1 386701287 12763292 2980596..2981627 1 NC_017660.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit; arginine succinyltransferase 2981627 astA 12763292 astA Escherichia coli KO11FL arginine succinyltransferase YP_006165124.1 2980596 D 595495 CDS YP_006165125.1 386701288 12763293 2981624..2983102 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; succinylglutamic semialdehyde dehydrogenase 2983102 astD 12763293 astD Escherichia coli KO11FL succinylglutamic semialdehyde dehydrogenase YP_006165125.1 2981624 D 595495 CDS YP_006165126.1 386701289 12763294 2983099..2984442 1 NC_017660.1 COG3724 Succinylarginine dihydrolase; succinylarginine dihydrolase 2984442 astB 12763294 astB Escherichia coli KO11FL succinylarginine dihydrolase YP_006165126.1 2983099 D 595495 CDS YP_006165127.1 386701290 12763295 2984435..2985403 1 NC_017660.1 COG2988 Succinylglutamate desuccinylase; succinylglutamate desuccinylase 2985403 astE 12763295 astE Escherichia coli KO11FL succinylglutamate desuccinylase YP_006165127.1 2984435 D 595495 CDS YP_006165128.1 386701291 12763296 2985733..2986218 1 NC_017660.1 COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; hypothetical protein 2986218 spy 12763296 spy Escherichia coli KO11FL hypothetical protein YP_006165128.1 2985733 D 595495 CDS YP_006165129.1 386701292 12763297 2986421..2986996 1 NC_017660.1 COG3758 Uncharacterized protein conserved in bacteria; yes; hypothetical protein 2986996 12763297 KO11_14025 Escherichia coli KO11FL hypothetical protein YP_006165129.1 2986421 D 595495 CDS YP_006165130.1 386701293 12763298 complement(2986956..2987843) 1 NC_017660.1 COG0322 Nuclease subunit of the excinuclease complex; nucleotide excision repair endonuclease 2987843 cho 12763298 cho Escherichia coli KO11FL nucleotide excision repair endonuclease YP_006165130.1 2986956 R 595495 CDS YP_006165131.1 386701294 12763299 complement(2988073..2988900) 1 NC_017660.1 COG0171 NAD synthase; NAD synthetase 2988900 nadE 12763299 nadE Escherichia coli KO11FL NAD synthetase YP_006165131.1 2988073 R 595495 CDS YP_006165132.1 386701295 12763300 2989102..2989440 1 NC_017660.1 DNA-binding transcriptional activator OsmE 2989440 osmE 12763300 osmE Escherichia coli KO11FL DNA-binding transcriptional activator OsmE YP_006165132.1 2989102 D 595495 CDS YP_006165133.1 386701296 12763301 2989739..2990059 1 NC_017660.1 COG1440 Phosphotransferase system cellobiose-specific component IIB; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB 2990059 chbB 12763301 chbB Escherichia coli KO11FL PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB YP_006165133.1 2989739 D 595495 CDS YP_006165134.1 386701297 12763302 2990144..2991502 1 NC_017660.1 COG1455 Phosphotransferase system cellobiose-specific component IIC; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC 2991502 chbC 12763302 chbC Escherichia coli KO11FL PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC YP_006165134.1 2990144 D 595495 CDS YP_006165135.1 386701298 12763303 2991553..2991903 1 NC_017660.1 COG1447 Phosphotransferase system cellobiose-specific component IIA; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA 2991903 chbA 12763303 chbA Escherichia coli KO11FL PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA YP_006165135.1 2991553 D 595495 CDS YP_006165136.1 386701299 12763304 2991914..2992753 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator ChbR 2992753 chbR 12763304 chbR Escherichia coli KO11FL DNA-binding transcriptional regulator ChbR YP_006165136.1 2991914 D 595495 CDS YP_006165137.1 386701300 12763305 2992857..2994209 1 NC_017660.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; cryptic phospho-beta-glucosidase, NAD(P)-binding protein 2994209 chbF 12763305 chbF Escherichia coli KO11FL cryptic phospho-beta-glucosidase, NAD(P)-binding protein YP_006165137.1 2992857 D 595495 CDS YP_006165138.1 386701301 12763306 2994222..2994980 1 NC_017660.1 COG3394 Uncharacterized protein conserved in bacteria; chbG; hypothetical protein 2994980 12763306 KO11_14070 Escherichia coli KO11FL hypothetical protein YP_006165138.1 2994222 D 595495 CDS YP_006165139.1 386701302 12763307 complement(2995027..2997288) 1 NC_017660.1 COG0753 Catalase; hydroperoxidase II 2997288 katE 12763307 katE Escherichia coli KO11FL hydroperoxidase II YP_006165139.1 2995027 R 595495 CDS YP_006165140.1 386701303 12763308 2997492..2997734 1 NC_017660.1 cell division modulator 2997734 cedA 12763308 cedA Escherichia coli KO11FL cell division modulator YP_006165140.1 2997492 D 595495 CDS YP_006165141.1 386701304 12763309 2998023..2998379 1 NC_017660.1 ydjO2; hypothetical protein 2998379 12763309 KO11_14085 Escherichia coli KO11FL hypothetical protein YP_006165141.1 2998023 D 595495 CDS YP_006165142.1 386701305 12763310 2998389..2998826 1 NC_017660.1 ydjO1; hypothetical protein 2998826 12763310 KO11_14090 Escherichia coli KO11FL hypothetical protein YP_006165142.1 2998389 D 595495 CDS YP_006165143.1 386701306 12763311 complement(2998830..3000221) 1 NC_017660.1 COG1823 Predicted Na+/dicarboxylate symporter; putative transporter 3000221 ydjN 12763311 ydjN Escherichia coli KO11FL putative transporter YP_006165143.1 2998830 R 595495 CDS YP_006165144.1 386701307 12763312 complement(3000354..3000944) 1 NC_017660.1 COG1988 Predicted membrane-bound metal-dependent hydrolases; inner membrane protein 3000944 ydjM 12763312 ydjM Escherichia coli KO11FL inner membrane protein YP_006165144.1 3000354 R 595495 CDS YP_006165145.1 386701308 12763313 complement(3001107..3001775) 1 NC_017660.1 COG0637 Predicted phosphatase/phosphohexomutase; 2-deoxyglucose-6-phosphatase 3001775 yniC 12763313 yniC Escherichia coli KO11FL 2-deoxyglucose-6-phosphatase YP_006165145.1 3001107 R 595495 CDS YP_006165146.1 386701309 12763314 3001922..3002458 1 NC_017660.1 putative inner membrane protein 3002458 yniB 12763314 yniB Escherichia coli KO11FL putative inner membrane protein YP_006165146.1 3001922 D 595495 CDS YP_006165147.1 386701310 12763315 complement(3002499..3003359) 1 NC_017660.1 COG3001 Fructosamine-3-kinase; yniA; hypothetical protein 3003359 12763315 KO11_14115 Escherichia coli KO11FL hypothetical protein YP_006165147.1 3002499 R 595495 CDS YP_006165148.1 386701311 12763316 complement(3003465..3003755) 1 NC_017660.1 ydiZ; hypothetical protein 3003755 12763316 KO11_14120 Escherichia coli KO11FL hypothetical protein YP_006165148.1 3003465 R 595495 CDS YP_006165149.1 386701312 12763317 complement(3003856..3004785) 1 NC_017660.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); 6-phosphofructokinase 3004785 pfkB 12763317 pfkB Escherichia coli KO11FL 6-phosphofructokinase YP_006165149.1 3003856 R 595495 CDS YP_006165150.1 386701313 12763318 3005072..3005830 1 NC_017660.1 COG3137 Putative salt-induced outer membrane protein; ydiY; hypothetical protein 3005830 12763318 KO11_14130 Escherichia coli KO11FL hypothetical protein YP_006165150.1 3005072 D 595495 CDS YP_006165151.1 386701314 12763319 complement(3005883..3005990) 1 NC_017660.1 yniD; hypothetical protein 3005990 12763319 KO11_14135 Escherichia coli KO11FL hypothetical protein YP_006165151.1 3005883 R 595495 CDS YP_006165152.1 386701315 12763320 complement(3006226..3007434) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3007434 12763320 KO11_14140 Escherichia coli KO11FL IS10 transposase YP_006165152.1 3006226 R 595495 CDS YP_006165153.1 386701316 12763321 3009926..3011854 1 NC_017660.1 COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 3011854 thrS 12763321 thrS Escherichia coli KO11FL threonyl-tRNA synthetase YP_006165153.1 3009926 D 595495 CDS YP_006165154.1 386701317 12763322 3011858..3012400 1 NC_017660.1 COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 3012400 infC 12763322 infC Escherichia coli KO11FL translation initiation factor IF-3 YP_006165154.1 3011858 D 595495 CDS YP_006165155.1 386701318 12763323 3012497..3012694 1 NC_017660.1 COG0291 Ribosomal protein L35; 50S ribosomal protein L35 3012694 rpmI 12763323 rpmI Escherichia coli KO11FL 50S ribosomal protein L35 YP_006165155.1 3012497 D 595495 CDS YP_006165156.1 386701319 12763324 3012747..3013103 1 NC_017660.1 COG0292 Ribosomal protein L20; 50S ribosomal protein L20 3013103 rplT 12763324 rplT Escherichia coli KO11FL 50S ribosomal protein L20 YP_006165156.1 3012747 D 595495 CDS YP_006165158.1 386701321 12763326 3013553..3014536 1 NC_017660.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 3014536 pheS 12763326 pheS Escherichia coli KO11FL phenylalanyl-tRNA synthetase subunit alpha YP_006165158.1 3013553 D 595495 CDS YP_006165159.1 386701322 12763327 3014551..3016938 1 NC_017660.1 COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 3016938 pheT 12763327 pheT Escherichia coli KO11FL phenylalanyl-tRNA synthetase subunit beta YP_006165159.1 3014551 D 595495 CDS YP_006165160.1 386701323 12763328 3016943..3017242 1 NC_017660.1 COG0776 Bacterial nucleoid DNA-binding protein; integration host factor subunit alpha 3017242 ihfA 12763328 ihfA Escherichia coli KO11FL integration host factor subunit alpha YP_006165160.1 3016943 D 595495 CDS YP_006165161.1 386701324 12763329 3017343..3018323 1 NC_017660.1 COG4139 ABC-type cobalamin transport system, permease component; vtamin B12-transporter permease 3018323 btuC 12763329 btuC Escherichia coli KO11FL vtamin B12-transporter permease YP_006165161.1 3017343 D 595495 CDS YP_006165162.1 386701325 12763330 3018386..3018937 1 NC_017660.1 COG0386 Glutathione peroxidase; putative glutathione peroxidase 3018937 btuE 12763330 btuE Escherichia coli KO11FL putative glutathione peroxidase YP_006165162.1 3018386 D 595495 CDS YP_006165163.1 386701326 12763331 3018937..3019686 1 NC_017660.1 COG4138 ABC-type cobalamin transport system, ATPase component; vitamin B12-transporter ATPase 3019686 btuD 12763331 btuD Escherichia coli KO11FL vitamin B12-transporter ATPase YP_006165163.1 3018937 D 595495 CDS YP_006165164.1 386701327 12763332 3019764..3020228 1 NC_017660.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Lipoprotein, NlpC/P60 family 3020228 nlpC 12763332 nlpC Escherichia coli KO11FL Lipoprotein, NlpC/P60 family YP_006165164.1 3019764 D 595495 CDS YP_006165165.1 386701328 12763333 3020475..3021188 1 NC_017660.1 COG2200 FOG: EAL domain; ydiV; hypothetical protein 3021188 12763333 KO11_14210 Escherichia coli KO11FL hypothetical protein YP_006165165.1 3020475 D 595495 CDS YP_006165166.1 386701329 12763334 3021251..3022687 1 NC_017660.1 COG0397 Uncharacterized conserved protein; ydiU; hypothetical protein 3022687 12763334 KO11_14215 Escherichia coli KO11FL hypothetical protein YP_006165166.1 3021251 D 595495 CDS YP_006165167.1 386701330 12763335 complement(3022691..3022909) 1 NC_017660.1 COG4256 Hemin uptake protein; ydiE; hypothetical protein 3022909 12763335 KO11_14220 Escherichia coli KO11FL hypothetical protein YP_006165167.1 3022691 R 595495 CDS YP_006165168.1 386701331 12763336 complement(3023014..3024060) 1 NC_017660.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 3024060 aroH 12763336 aroH Escherichia coli KO11FL phospho-2-dehydro-3-deoxyheptonate aldolase YP_006165168.1 3023014 R 595495 CDS YP_006165169.1 386701332 12763337 complement(3024217..3025050) 1 NC_017660.1 COG1806 Uncharacterized protein conserved in bacteria; PEP synthetase regulatory protein 3025050 ydiA 12763337 ydiA Escherichia coli KO11FL PEP synthetase regulatory protein YP_006165169.1 3024217 R 595495 CDS YP_006165170.1 386701333 12763338 3025383..3027761 1 NC_017660.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase 3027761 pps 12763338 pps Escherichia coli KO11FL phosphoenolpyruvate synthase YP_006165170.1 3025383 D 595495 CDS YP_006165171.1 386701334 12763339 complement(3027818..3029461) 1 NC_017660.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; short chain acyl-CoA synthetase 3029461 fadK 12763339 fadK Escherichia coli KO11FL short chain acyl-CoA synthetase YP_006165171.1 3027818 R 595495 CDS YP_006165172.1 386701335 12763340 complement(3029518..3029811) 1 NC_017660.1 COG2440 Ferredoxin-like protein; ferredoxin-like protein FixX 3029811 ydiT 12763340 ydiT Escherichia coli KO11FL ferredoxin-like protein FixX YP_006165172.1 3029518 R 595495 CDS YP_006165173.1 386701336 12763341 complement(3029808..3031097) 1 NC_017660.1 COG0644 Dehydrogenases (flavoproteins); oxidoreductase 3031097 ydiS 12763341 ydiS Escherichia coli KO11FL oxidoreductase YP_006165173.1 3029808 R 595495 CDS YP_006165174.1 386701337 12763342 complement(3031153..3032091) 1 NC_017660.1 COG2025 Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit YdiR 3032091 ydiR 12763342 ydiR Escherichia coli KO11FL electron transfer flavoprotein subunit YdiR YP_006165174.1 3031153 R 595495 CDS YP_006165175.1 386701338 12763343 complement(3032111..3032875) 1 NC_017660.1 COG2086 Electron transfer flavoprotein, beta subunit; ydiQ; hypothetical protein 3032875 12763343 KO11_14260 Escherichia coli KO11FL hypothetical protein YP_006165175.1 3032111 R 595495 CDS YP_006165176.1 386701339 12763344 3033191..3034102 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator, ARAC-type 3034102 ydiP 12763344 ydiP Escherichia coli KO11FL putative DNA-binding transcriptional regulator, ARAC-type YP_006165176.1 3033191 D 595495 CDS YP_006165177.1 386701340 12763345 complement(3034145..3035296) 1 NC_017660.1 COG1960 Acyl-CoA dehydrogenases; putative acyl-CoA dehydrogenase 3035296 ydiO 12763345 ydiO Escherichia coli KO11FL putative acyl-CoA dehydrogenase YP_006165177.1 3034145 R 595495 CDS YP_006165178.1 386701341 12763346 complement(3035310..3036905) 1 NC_017660.1 COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; fused putative acetyl-CoA: acetoacetyl-CoA transferase: alpha subunit/beta subunit 3036905 ydiF 12763346 ydiF Escherichia coli KO11FL fused putative acetyl-CoA: acetoacetyl-CoA transferase: alpha subunit/beta subunit YP_006165178.1 3035310 R 595495 CDS YP_006165179.1 386701342 12763347 complement(3037049..3037807) 1 NC_017660.1 COG0710 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase 3037807 aroD 12763347 aroD Escherichia coli KO11FL 3-dehydroquinate dehydratase YP_006165179.1 3037049 R 595495 CDS YP_006165180.1 386701343 12763348 complement(3037838..3038704) 1 NC_017660.1 COG0169 Shikimate 5-dehydrogenase; quinate/shikimate dehydrogenase 3038704 ydiB 12763348 ydiB Escherichia coli KO11FL quinate/shikimate dehydrogenase YP_006165180.1 3037838 R 595495 CDS YP_006165181.1 386701344 12763349 complement(3038716..3039981) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; Transporter, major facilitator family protein 3039981 ydiN 12763349 ydiN Escherichia coli KO11FL Transporter, major facilitator family protein YP_006165181.1 3038716 R 595495 CDS YP_006165182.1 386701345 12763350 complement(3040208..3041422) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter, MFS superfamily protein 3041422 ydiM 12763350 ydiM Escherichia coli KO11FL putative transporter, MFS superfamily protein YP_006165182.1 3040208 R 595495 CDS YP_006165183.1 386701346 12763351 complement(3041522..3041878) 1 NC_017660.1 ydiL; hypothetical protein 3041878 12763351 KO11_14300 Escherichia coli KO11FL hypothetical protein YP_006165183.1 3041522 R 595495 CDS YP_006165184.1 386701347 12763352 complement(3042307..3043419) 1 NC_017660.1 COG0628 Predicted permease; putative inner membrane protein 3043419 ydiK 12763352 ydiK Escherichia coli KO11FL putative inner membrane protein YP_006165184.1 3042307 R 595495 CDS YP_006165185.1 386701348 12763353 3043808..3046864 1 NC_017660.1 COG0277 FAD/FMN-containing dehydrogenases; putative FAD-linked oxidoreductase 3046864 ydiJ 12763353 ydiJ Escherichia coli KO11FL putative FAD-linked oxidoreductase YP_006165185.1 3043808 D 595495 CDS YP_006165186.1 386701349 12763354 3046861..3047271 1 NC_017660.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; acyl-CoA esterase 3047271 ydiI 12763354 ydiI Escherichia coli KO11FL acyl-CoA esterase YP_006165186.1 3046861 D 595495 CDS YP_006165187.1 386701350 12763355 3047290..3047559 1 NC_017660.1 ydiH; hypothetical protein 3047559 12763355 KO11_14320 Escherichia coli KO11FL hypothetical protein YP_006165187.1 3047290 D 595495 CDS YP_006165188.1 386701351 12763356 3048107..3048475 1 NC_017660.1 COG0316 Uncharacterized conserved protein; iron-sulfur cluster assembly scaffold protein 3048475 sufA 12763356 sufA Escherichia coli KO11FL iron-sulfur cluster assembly scaffold protein YP_006165188.1 3048107 D 595495 CDS YP_006165189.1 386701352 12763357 3048484..3049971 1 NC_017660.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; cysteine desulfurase activator complex subunit SufB 3049971 sufB 12763357 sufB Escherichia coli KO11FL cysteine desulfurase activator complex subunit SufB YP_006165189.1 3048484 D 595495 CDS YP_006165190.1 386701353 12763358 3049981..3050727 1 NC_017660.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component; cysteine desulfurase 3050727 sufC 12763358 sufC Escherichia coli KO11FL cysteine desulfurase YP_006165190.1 3049981 D 595495 CDS YP_006165191.1 386701354 12763359 3050702..3051973 1 NC_017660.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; cysteine desulfurase activator complex subunit SufD 3051973 sufD 12763359 sufD Escherichia coli KO11FL cysteine desulfurase activator complex subunit SufD YP_006165191.1 3050702 D 595495 CDS YP_006165192.1 386701355 12763360 3051970..3053190 1 NC_017660.1 COG0520 Selenocysteine lyase; bifunctional cysteine desulfurase/selenocysteine lyase 3053190 sufS 12763360 sufS Escherichia coli KO11FL bifunctional cysteine desulfurase/selenocysteine lyase YP_006165192.1 3051970 D 595495 CDS YP_006165193.1 386701356 12763361 3053203..3053619 1 NC_017660.1 COG2166 SufE protein probably involved in Fe-S center assembly; cysteine desufuration protein SufE 3053619 sufE 12763361 sufE Escherichia coli KO11FL cysteine desufuration protein SufE YP_006165193.1 3053203 D 595495 CDS YP_006165194.1 386701357 12763362 3053768..3054772 1 NC_017660.1 COG1376 Uncharacterized protein conserved in bacteria; ynhG; hypothetical protein 3054772 12763362 KO11_14355 Escherichia coli KO11FL hypothetical protein YP_006165194.1 3053768 D 595495 CDS YP_006165195.1 386701358 12763363 complement(3054836..3055072) 1 NC_017660.1 COG4238 Murein lipoprotein; murein lipoprotein 3055072 lpp 12763363 lpp Escherichia coli KO11FL murein lipoprotein YP_006165195.1 3054836 R 595495 CDS YP_006165196.1 386701359 12763364 complement(3055383..3056795) 1 NC_017660.1 COG0469 Pyruvate kinase; pyruvate kinase 3056795 pykF 12763364 pykF Escherichia coli KO11FL pyruvate kinase YP_006165196.1 3055383 R 595495 CDS YP_006165197.1 386701360 12763365 3057352..3057561 1 NC_017660.1 ydhZ; hypothetical protein 3057561 12763365 KO11_14370 Escherichia coli KO11FL hypothetical protein YP_006165197.1 3057352 D 595495 CDS YP_006165198.1 386701361 12763366 3058017..3058643 1 NC_017660.1 COG0437 Fe-S-cluster-containing hydrogenase components 1; ydhY; hypothetical protein 3058643 12763366 KO11_14375 Escherichia coli KO11FL hypothetical protein YP_006165198.1 3058017 D 595495 CDS YP_006165199.1 386701362 12763367 3058664..3060766 1 NC_017660.1 COG2414 Aldehyde:ferredoxin oxidoreductase; putative oxidoreductase 3060766 ydhV 12763367 ydhV Escherichia coli KO11FL putative oxidoreductase YP_006165199.1 3058664 D 595495 CDS YP_006165200.1 386701363 12763368 3060779..3061417 1 NC_017660.1 ydhW; hypothetical protein 3061417 12763368 KO11_14385 Escherichia coli KO11FL hypothetical protein YP_006165200.1 3060779 D 595495 CDS YP_006165201.1 386701364 12763369 3061430..3062149 1 NC_017660.1 COG0437 Fe-S-cluster-containing hydrogenase components 1; putative oxidoreductase, Fe-S subunit 3062149 ydhX 12763369 ydhX Escherichia coli KO11FL putative oxidoreductase, Fe-S subunit YP_006165201.1 3061430 D 595495 CDS YP_006165202.1 386701365 12763370 3062146..3062931 1 NC_017660.1 thiosulfate reductase cytochrome B subunit 3062931 ydhU 12763370 ydhU Escherichia coli KO11FL thiosulfate reductase cytochrome B subunit YP_006165202.1 3062146 D 595495 CDS YP_006165203.1 386701366 12763371 3062935..3063747 1 NC_017660.1 ydhT; hypothetical protein 3063747 12763371 KO11_14400 Escherichia coli KO11FL hypothetical protein YP_006165203.1 3062935 D 595495 CDS YP_006165204.1 386701367 12763372 complement(3063759..3065363) 1 NC_017660.1 COG4529 Uncharacterized protein conserved in bacteria; ydhS; hypothetical protein 3065363 12763372 KO11_14405 Escherichia coli KO11FL hypothetical protein YP_006165204.1 3063759 R 595495 CDS YP_006165205.1 386701368 12763373 complement(3065489..3065794) 1 NC_017660.1 COG0113 Delta-aminolevulinic acid dehydratase; putative monooxygenase 3065794 ydhR 12763373 ydhR Escherichia coli KO11FL putative monooxygenase YP_006165205.1 3065489 R 595495 CDS YP_006165206.1 386701369 12763376 3066367..3067623 1 NC_017660.1 ydhQ; hypothetical protein 3067623 12763376 KO11_14415 Escherichia coli KO11FL hypothetical protein YP_006165206.1 3066367 D 595495 CDS YP_006165207.1 386701370 12763377 complement(3067664..3069037) 1 NC_017660.1 COG0534 Na+-driven multidrug efflux pump; multidrug efflux protein 3069037 mdtK 12763377 mdtK Escherichia coli KO11FL multidrug efflux protein YP_006165207.1 3067664 R 595495 CDS YP_006165208.1 386701371 12763378 3069252..3069893 1 NC_017660.1 COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 3069893 ribC 12763378 ribC Escherichia coli KO11FL riboflavin synthase subunit alpha YP_006165208.1 3069252 D 595495 CDS YP_006165209.1 386701372 12763379 complement(3069933..3071081) 1 NC_017660.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane-fatty-acyl-phospholipid synthase 3071081 cfa 12763379 cfa Escherichia coli KO11FL cyclopropane-fatty-acyl-phospholipid synthase YP_006165209.1 3069933 R 595495 CDS YP_006165210.1 386701373 12763380 complement(3071372..3072583) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 3072583 ydhC 12763380 ydhC Escherichia coli KO11FL putative transporter YP_006165210.1 3071372 R 595495 CDS YP_006165211.1 386701374 12763381 3072696..3073628 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 3073628 ydhB 12763381 ydhB Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006165211.1 3072696 D 595495 CDS YP_006165212.1 386701375 12763382 complement(3073625..3074650) 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional repressor PurR 3074650 purR 12763382 purR Escherichia coli KO11FL DNA-binding transcriptional repressor PurR YP_006165212.1 3073625 R 595495 CDS YP_006165213.1 386701376 12763383 3074949..3075038 1 NC_017660.1 ynhF; hypothetical protein 3075038 12763383 KO11_14450 Escherichia coli KO11FL hypothetical protein YP_006165213.1 3074949 D 595495 CDS YP_006165214.1 386701377 12763384 3075204..3076373 1 NC_017660.1 COG2814 Arabinose efflux permease; putative transporter 3076373 ydhP 12763384 ydhP Escherichia coli KO11FL putative transporter YP_006165214.1 3075204 D 595495 CDS YP_006165215.1 386701378 12763385 complement(3076665..3077645) 1 NC_017660.1 COG3547 Transposase and inactivated derivatives; putative IS621 transposase 3077645 12763385 KO11_14460 Escherichia coli KO11FL putative IS621 transposase YP_006165215.1 3076665 R 595495 CDS YP_006165216.1 386701379 12763386 complement(3077887..3078468) 1 NC_017660.1 COG0605 Superoxide dismutase; superoxide dismutase 3078468 sodB 12763386 sodB Escherichia coli KO11FL superoxide dismutase YP_006165216.1 3077887 R 595495 CDS YP_006165217.1 386701380 12763387 complement(3078596..3079411) 1 NC_017660.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins); putative exported hydrolase 3079411 ydhO 12763387 ydhO Escherichia coli KO11FL putative exported hydrolase YP_006165217.1 3078596 R 595495 CDS YP_006165218.1 386701381 12763388 3079746..3080093 1 NC_017660.1 COG0278 Glutaredoxin-related protein; glutaredoxin-4 3080093 grxD 12763388 grxD Escherichia coli KO11FL glutaredoxin-4 YP_006165218.1 3079746 D 595495 CDS YP_006165219.1 386701382 12763389 complement(3080144..3084760) 1 NC_017660.1 COG1201 Lhr-like helicases; putative ATP-dependent helicase Lhr 3084760 lhr 12763389 lhr Escherichia coli KO11FL putative ATP-dependent helicase Lhr YP_006165219.1 3080144 R 595495 CDS YP_006165220.1 386701383 12763390 complement(3084853..3085500) 1 NC_017660.1 COG0847 DNA polymerase III, epsilon subunit and related 3-5 exonucleases; ribonuclease T 3085500 rnt 12763390 rnt Escherichia coli KO11FL ribonuclease T YP_006165220.1 3084853 R 595495 CDS YP_006165221.1 386701384 12763391 complement(3085603..3086010) 1 NC_017660.1 COG0346 Lactoylglutathione lyase and related lyases; glyoxalase I 3086010 gloA 12763391 gloA Escherichia coli KO11FL glyoxalase I YP_006165221.1 3085603 R 595495 CDS YP_006165222.1 386701385 12763392 complement(3086091..3087188) 1 NC_017660.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; N-ethylmaleimide reductase 3087188 nemA 12763392 nemA Escherichia coli KO11FL N-ethylmaleimide reductase YP_006165222.1 3086091 R 595495 CDS YP_006165223.1 386701386 12763393 complement(3087225..3087824) 1 NC_017660.1 COG1309 Transcriptional regulator; putative DNA-binding transcriptional regulator 3087824 nemR 12763393 nemR Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006165223.1 3087225 R 595495 CDS YP_006165224.1 386701387 12763394 3087927..3088166 1 NC_017660.1 COG3313 Predicted Fe-S protein; ydhL; hypothetical protein 3088166 12763394 KO11_14505 Escherichia coli KO11FL hypothetical protein YP_006165224.1 3087927 D 595495 CDS YP_006165225.1 386701388 12763395 3088215..3089111 1 NC_017660.1 COG4989 Predicted oxidoreductase; putative oxidoreductase 3089111 ydhF 12763395 ydhF Escherichia coli KO11FL putative oxidoreductase YP_006165225.1 3088215 D 595495 CDS YP_006165226.1 386701389 12763396 3089177..3089713 1 NC_017660.1 COG2032 Cu/Zn superoxide dismutase; superoxide dismutase 3089713 sodC 12763396 sodC Escherichia coli KO11FL superoxide dismutase YP_006165226.1 3089177 D 595495 CDS YP_006165227.1 386701390 12763397 complement(3089714..3091726) 1 NC_017660.1 COG1289 Predicted membrane protein; ydhK; hypothetical protein 3091726 12763397 KO11_14520 Escherichia coli KO11FL hypothetical protein YP_006165227.1 3089714 R 595495 CDS YP_006165228.1 386701391 12763398 complement(3091726..3092583) 1 NC_017660.1 COG1566 Multidrug resistance efflux pump; undecaprenyl pyrophosphate phosphatase 3092583 ydhJ 12763398 ydhJ Escherichia coli KO11FL undecaprenyl pyrophosphate phosphatase YP_006165228.1 3091726 R 595495 CDS YP_006165229.1 386701392 12763399 complement(3092586..3092822) 1 NC_017660.1 ydhI; hypothetical protein 3092822 12763399 KO11_14530 Escherichia coli KO11FL hypothetical protein YP_006165229.1 3092586 R 595495 CDS YP_006165230.1 386701393 12763400 3093023..3093457 1 NC_017660.1 COG1846 Transcriptional regulators; transcriptional regulator SlyA 3093457 slyA 12763400 slyA Escherichia coli KO11FL transcriptional regulator SlyA YP_006165230.1 3093023 D 595495 CDS YP_006165231.1 386701394 12763401 complement(3093504..3093971) 1 NC_017660.1 COG3133 Outer membrane lipoprotein; outer membrane lipoprotein SlyB 3093971 slyB 12763401 slyB Escherichia coli KO11FL outer membrane lipoprotein SlyB YP_006165231.1 3093504 R 595495 CDS YP_006165232.1 386701395 12763402 3094245..3095354 1 NC_017660.1 COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases; anhydro-N-acetylmuramic acid kinase 3095354 anmK 12763402 anmK Escherichia coli KO11FL anhydro-N-acetylmuramic acid kinase YP_006165232.1 3094245 D 595495 CDS YP_006165233.1 386701396 12763403 3095458..3095781 1 NC_017660.1 COG3895 Predicted periplasmic protein; lysozyme inhibitor 3095781 mliC 12763403 mliC Escherichia coli KO11FL lysozyme inhibitor YP_006165233.1 3095458 D 595495 CDS YP_006165234.1 386701397 12763404 3095840..3096496 1 NC_017660.1 COG0259 Pyridoxamine-phosphate oxidase; pyridoxamine 5'-phosphate oxidase 3096496 pdxH 12763404 pdxH Escherichia coli KO11FL pyridoxamine 5'-phosphate oxidase YP_006165234.1 3095840 D 595495 CDS YP_006165235.1 386701398 12763405 3096625..3097899 1 NC_017660.1 COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 3097899 tyrS 12763405 tyrS Escherichia coli KO11FL tyrosyl-tRNA synthetase YP_006165235.1 3096625 D 595495 CDS YP_006165236.1 386701399 12763406 3097961..3098821 1 NC_017660.1 COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxamine kinase 3098821 pdxY 12763406 pdxY Escherichia coli KO11FL pyridoxamine kinase YP_006165236.1 3097961 D 595495 CDS YP_006165237.1 386701400 12763407 complement(3098865..3099470) 1 NC_017660.1 COG0625 Glutathione S-transferase; glutathionine S-transferase 3099470 gst 12763407 gst Escherichia coli KO11FL glutathionine S-transferase YP_006165237.1 3098865 R 595495 CDS YP_006165238.1 386701401 12763408 complement(3099576..3101078) 1 NC_017660.1 COG3104 Dipeptide/tripeptide permease; putative tripeptide transporter permease 3101078 tppB 12763408 tppB Escherichia coli KO11FL putative tripeptide transporter permease YP_006165238.1 3099576 R 595495 CDS YP_006165239.1 386701402 12763409 complement(3101361..3101561) 1 NC_017660.1 hypothetical protein 3101561 12763409 KO11_14580 Escherichia coli KO11FL hypothetical protein YP_006165239.1 3101361 R 595495 CDS YP_006165240.1 386701403 12763410 complement(3101689..3102324) 1 NC_017660.1 COG0177 Predicted EndoIII-related endonuclease; endonuclease III 3102324 nth 12763410 nth Escherichia coli KO11FL endonuclease III YP_006165240.1 3101689 R 595495 CDS YP_006165241.1 386701404 12763411 complement(3102324..3103019) 1 NC_017660.1 COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RsxE; electron transport complex protein RsxE 3103019 rsxE 12763411 rsxE Escherichia coli KO11FL electron transport complex protein RsxE YP_006165241.1 3102324 R 595495 CDS YP_006165242.1 386701405 12763412 complement(3103023..3103643) 1 NC_017660.1 COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RsxG; electron transport complex protein RsxG 3103643 rsxG 12763412 rsxG Escherichia coli KO11FL electron transport complex protein RsxG YP_006165242.1 3103023 R 595495 CDS YP_006165243.1 386701406 12763413 complement(3103647..3104705) 1 NC_017660.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RsxD; electron transport complex protein RsxD 3104705 rsxD 12763413 rsxD Escherichia coli KO11FL electron transport complex protein RsxD YP_006165243.1 3103647 R 595495 CDS YP_006165244.1 386701407 12763414 complement(3104706..3106928) 1 NC_017660.1 COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RsxC; electron transport complex protein RsxC 3106928 rsxC 12763414 rsxC Escherichia coli KO11FL electron transport complex protein RsxC YP_006165244.1 3104706 R 595495 CDS YP_006165245.1 386701408 12763415 complement(3106921..3107499) 1 NC_017660.1 COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RsxB; electron transport complex protein RsxB 3107499 rsxB 12763415 rsxB Escherichia coli KO11FL electron transport complex protein RsxB YP_006165245.1 3106921 R 595495 CDS YP_006165246.1 386701409 12763416 complement(3107499..3108080) 1 NC_017660.1 COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RsxA; electron transport complex protein RsxA 3108080 rsxA 12763416 rsxA Escherichia coli KO11FL electron transport complex protein RsxA YP_006165246.1 3107499 R 595495 CDS YP_006165247.1 386701410 12763417 complement(3108157..3108597) 1 NC_017660.1 ydgK; hypothetical protein 3108597 12763417 KO11_14620 Escherichia coli KO11FL hypothetical protein YP_006165247.1 3108157 R 595495 CDS YP_006165248.1 386701411 12763418 complement(3108683..3108898) 1 NC_017660.1 oriC-binding nucleoid-associated protein 3108898 cnu 12763418 cnu Escherichia coli KO11FL oriC-binding nucleoid-associated protein YP_006165248.1 3108683 R 595495 CDS YP_006165249.1 386701412 12763419 3109539..3110579 1 NC_017660.1 COG0673 Predicted dehydrogenases and related proteins; putative oxidoreductase 3110579 ydgJ 12763419 ydgJ Escherichia coli KO11FL putative oxidoreductase YP_006165249.1 3109539 D 595495 CDS YP_006165250.1 386701413 12763420 complement(3110614..3111615) 1 NC_017660.1 COG1816 Adenosine deaminase; adenosine deaminase 3111615 add 12763420 add Escherichia coli KO11FL adenosine deaminase YP_006165250.1 3110614 R 595495 CDS YP_006165251.1 386701414 12763421 complement(3111719..3112891) 1 NC_017660.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; bifunctional beta-cystathionase and regulator of maltose regulon 3112891 malY 12763421 malY Escherichia coli KO11FL bifunctional beta-cystathionase and regulator of maltose regulon YP_006165251.1 3111719 R 595495 CDS YP_006165252.1 386701415 12763422 complement(3112901..3114493) 1 NC_017660.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; bifunctional PTS system maltose and glucose-specific transporter subunits IICB 3114493 malX 12763422 malX Escherichia coli KO11FL bifunctional PTS system maltose and glucose-specific transporter subunits IICB YP_006165252.1 3112901 R 595495 CDS YP_006165253.1 386701416 12763423 3114668..3115696 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional repressor MalI 3115696 malI 12763423 malI Escherichia coli KO11FL DNA-binding transcriptional repressor MalI YP_006165253.1 3114668 D 595495 CDS YP_006165254.1 386701417 12763424 3115808..3116575 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 7-alpha-hydroxysteroid dehydrogenase 3116575 hdhA 12763424 hdhA Escherichia coli KO11FL 7-alpha-hydroxysteroid dehydrogenase YP_006165254.1 3115808 D 595495 CDS YP_006165255.1 386701418 12763425 3116804..3117394 1 NC_017660.1 COG1309 Transcriptional regulator; DNA-binding transcriptional repressor UidR 3117394 uidR 12763425 uidR Escherichia coli KO11FL DNA-binding transcriptional repressor UidR YP_006165255.1 3116804 D 595495 CDS YP_006165256.1 386701419 12763426 3117782..3119593 1 NC_017660.1 COG3250 Beta-galactosidase/beta-glucuronidase; beta-D-glucuronidase 3119593 uidA 12763426 uidA Escherichia coli KO11FL beta-D-glucuronidase YP_006165256.1 3117782 D 595495 CDS YP_006165257.1 386701420 12763427 3119590..3120963 1 NC_017660.1 COG2211 Na+/melibiose symporter and related transporters; glucuronide transporter 3120963 uidB 12763427 uidB Escherichia coli KO11FL glucuronide transporter YP_006165257.1 3119590 D 595495 CDS YP_006165258.1 386701421 12763428 3121002..3122267 1 NC_017660.1 putative outer membrane porin protein 3122267 uidC 12763428 uidC Escherichia coli KO11FL putative outer membrane porin protein YP_006165258.1 3121002 D 595495 CDS YP_006165259.1 386701422 12763429 complement(3122493..3124001) 1 NC_017660.1 COG5339 Uncharacterized protein conserved in bacteria; ydgA; hypothetical protein 3124001 12763429 KO11_14680 Escherichia coli KO11FL hypothetical protein YP_006165259.1 3122493 R 595495 CDS YP_006165260.1 386701423 12763430 complement(3124102..3125277) 1 NC_017660.1 COG1482 Phosphomannose isomerase; mannose-6-phosphate isomerase 3125277 manA 12763430 manA Escherichia coli KO11FL mannose-6-phosphate isomerase YP_006165260.1 3124102 R 595495 CDS YP_006165261.1 386701424 12763431 3125476..3127122 1 NC_017660.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; fumarate hydratase FumA 3127122 fumA 12763431 fumA Escherichia coli KO11FL fumarate hydratase FumA YP_006165261.1 3125476 D 595495 CDS YP_006165262.1 386701425 12763432 3127265..3128668 1 NC_017660.1 COG0114 Fumarase; fumarate hydratase 3128668 fumC 12763432 fumC Escherichia coli KO11FL fumarate hydratase YP_006165262.1 3127265 D 595495 CDS YP_006165263.1 386701426 12763433 complement(3128665..3129594) 1 NC_017660.1 DNA replication terminus site-binding protein 3129594 tus 12763433 tus Escherichia coli KO11FL DNA replication terminus site-binding protein YP_006165263.1 3128665 R 595495 CDS YP_006165264.1 386701427 12763434 complement(3129670..3130971) 1 NC_017660.1 COG0642 Signal transduction histidine kinase; sensor protein RstB 3130971 rstB 12763434 rstB Escherichia coli KO11FL sensor protein RstB YP_006165264.1 3129670 R 595495 CDS YP_006165265.1 386701428 12763435 complement(3130975..3131694) 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator RstA 3131694 rstA 12763435 rstA Escherichia coli KO11FL DNA-binding transcriptional regulator RstA YP_006165265.1 3130975 R 595495 CDS YP_006165266.1 386701429 12763436 3131823..3132158 1 NC_017660.1 COG3136 Uncharacterized membrane protein required for alginate biosynthesis; GlpM family protein 3132158 ydgC 12763436 ydgC Escherichia coli KO11FL GlpM family protein YP_006165266.1 3131823 D 595495 CDS YP_006165267.1 386701430 12763437 complement(3132155..3132877) 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); dihydromonapterin reductase 3132877 folM 12763437 folM Escherichia coli KO11FL dihydromonapterin reductase YP_006165267.1 3132155 R 595495 CDS YP_006165268.1 386701431 12763438 complement(3132914..3134296) 1 NC_017660.1 COG0531 Amino acid transporters; putative arginine/ornithine antiporter 3134296 ydgI 12763438 ydgI Escherichia coli KO11FL putative arginine/ornithine antiporter YP_006165268.1 3132914 R 595495 CDS YP_006165269.1 386701432 12763439 complement(3134482..3135426) 1 NC_017660.1 ydgH; hypothetical protein 3135426 12763439 KO11_14735 Escherichia coli KO11FL hypothetical protein YP_006165269.1 3134482 R 595495 CDS YP_006165270.1 386701433 12763440 3135950..3137482 1 NC_017660.1 COG3288 NAD/NADP transhydrogenase alpha subunit; NAD(P) transhydrogenase subunit alpha 3137482 pntA 12763440 pntA Escherichia coli KO11FL NAD(P) transhydrogenase subunit alpha YP_006165270.1 3135950 D 595495 CDS YP_006165271.1 386701434 12763441 3137493..3138881 1 NC_017660.1 COG1282 NAD/NADP transhydrogenase beta subunit; pyridine nucleotide transhydrogenase 3138881 pntB 12763441 pntB Escherichia coli KO11FL pyridine nucleotide transhydrogenase YP_006165271.1 3137493 D 595495 CDS YP_006165272.1 386701435 12763442 complement(3138906..3139940) 1 NC_017660.1 COG0628 Predicted permease; pheromone autoinducer 2 transporter 3139940 tqsA 12763442 tqsA Escherichia coli KO11FL pheromone autoinducer 2 transporter YP_006165272.1 3138906 R 595495 CDS YP_006165273.1 386701436 12763443 3140352..3140717 1 NC_017660.1 COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux system protein MdtJ 3140717 mdtJ 12763443 mdtJ Escherichia coli KO11FL multidrug efflux system protein MdtJ YP_006165273.1 3140352 D 595495 CDS YP_006165274.1 386701437 12763444 3140704..3141033 1 NC_017660.1 COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux system protein MdtI 3141033 mdtI 12763444 mdtI Escherichia coli KO11FL multidrug efflux system protein MdtI YP_006165274.1 3140704 D 595495 CDS YP_006165275.1 386701438 12763445 complement(3141072..3141893) 1 NC_017660.1 COG3591 V8-like Glu-specific endopeptidase; putative exported metallopeptidase 3141893 ydgG 12763445 ydgG Escherichia coli KO11FL putative exported metallopeptidase YP_006165275.1 3141072 R 595495 CDS YP_006165276.1 386701439 12763446 complement(3142169..3142504) 1 NC_017660.1 asr; hypothetical protein 3142504 12763446 KO11_14770 Escherichia coli KO11FL hypothetical protein YP_006165276.1 3142169 R 595495 CDS YP_006165277.1 386701440 12763447 complement(3142901..3144154) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 3144154 ynfM 12763447 ynfM Escherichia coli KO11FL putative transporter YP_006165277.1 3142901 R 595495 CDS YP_006165278.1 386701441 12763448 3144261..3145154 1 NC_017660.1 COG0583 Transcriptional regulator; putative transcriptional regulator LysR-type 3145154 ynfL 12763448 ynfL Escherichia coli KO11FL putative transcriptional regulator LysR-type YP_006165278.1 3144261 D 595495 CDS YP_006165279.1 386701442 12763449 3145289..3146509 1 NC_017660.1 COG1940 Transcriptional regulator/sugar kinase; putative NAGC-like transcriptional regulator 3146509 dgsA 12763449 dgsA Escherichia coli KO11FL putative NAGC-like transcriptional regulator YP_006165279.1 3145289 D 595495 CDS YP_006165280.1 386701443 12763450 3146634..3147329 1 NC_017660.1 COG0132 Dethiobiotin synthetase; putative dithiobiotin synthetase 3147329 ynfK 12763450 ynfK Escherichia coli KO11FL putative dithiobiotin synthetase YP_006165280.1 3146634 D 595495 CDS YP_006165281.1 386701444 12763451 complement(3147282..3148538) 1 NC_017660.1 COG0038 Chloride channel protein EriC; putative voltage-gated ClC-type chloride channel ClcB 3148538 clcB 12763451 clcB Escherichia coli KO11FL putative voltage-gated ClC-type chloride channel ClcB YP_006165281.1 3147282 R 595495 CDS YP_006165282.1 386701445 12763452 complement(3148733..3149347) 1 NC_017660.1 COG3381 Uncharacterized component of anaerobic dehydrogenases; twin-argninine leader-binding protein DmsD 3149347 dmsD 12763452 dmsD Escherichia coli KO11FL twin-argninine leader-binding protein DmsD YP_006165282.1 3148733 R 595495 CDS YP_006165283.1 386701446 12763453 complement(3149390..3150244) 1 NC_017660.1 COG3302 DMSO reductase anchor subunit; oxidoreductase, membrane subunit 3150244 ynfH 12763453 ynfH Escherichia coli KO11FL oxidoreductase, membrane subunit YP_006165283.1 3149390 R 595495 CDS YP_006165284.1 386701447 12763454 complement(3150246..3150863) 1 NC_017660.1 COG0437 Fe-S-cluster-containing hydrogenase components 1; putative anaerobic dimethyl sulfoxide reductase chain ynfG 3150863 ynfG 12763454 ynfG Escherichia coli KO11FL putative anaerobic dimethyl sulfoxide reductase chain ynfG YP_006165284.1 3150246 R 595495 CDS YP_006165285.1 386701448 12763455 complement(3150874..3153300) 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; putative dimethyl sulfoxide reductase major subunit 3153300 ynfF 12763455 ynfF Escherichia coli KO11FL putative dimethyl sulfoxide reductase major subunit YP_006165285.1 3150874 R 595495 CDS YP_006165286.1 386701449 12763456 complement(3153358..3155784) 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; oxidoreductase subunit 3155784 ynfE 12763456 ynfE Escherichia coli KO11FL oxidoreductase subunit YP_006165286.1 3153358 R 595495 CDS YP_006165287.1 386701450 12763457 complement(3155983..3156288) 1 NC_017660.1 ynfD; hypothetical protein 3156288 12763457 KO11_14825 Escherichia coli KO11FL hypothetical protein YP_006165287.1 3155983 R 595495 CDS YP_006165288.1 386701451 12763458 3156396..3157106 1 NC_017660.1 lipoprotein 3157106 ynfC 12763458 ynfC Escherichia coli KO11FL lipoprotein YP_006165288.1 3156396 D 595495 CDS YP_006165289.1 386701452 12763459 complement(3157109..3157669) 1 NC_017660.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; spermidine N1-acetyltransferase 3157669 speG 12763459 speG Escherichia coli KO11FL spermidine N1-acetyltransferase YP_006165289.1 3157109 R 595495 CDS YP_006165290.1 386701453 12763460 complement(3157704..3158045) 1 NC_017660.1 ynfB; hypothetical protein 3158045 12763460 KO11_14840 Escherichia coli KO11FL hypothetical protein YP_006165290.1 3157704 R 595495 CDS YP_006165291.1 386701454 12763461 3158180..3158506 1 NC_017660.1 COG1742 Uncharacterized conserved protein; ynfA; hypothetical protein 3158506 12763461 KO11_14845 Escherichia coli KO11FL hypothetical protein YP_006165291.1 3158180 D 595495 CDS YP_006165292.1 386701455 12763462 3158712..3159926 1 NC_017660.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; bifunctional D-altronate/D-mannonate dehydratase 3159926 rspA 12763462 rspA Escherichia coli KO11FL bifunctional D-altronate/D-mannonate dehydratase YP_006165292.1 3158712 D 595495 CDS YP_006165293.1 386701456 12763463 3159938..3160957 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative oxidoreductase 3160957 rspB 12763463 rspB Escherichia coli KO11FL putative oxidoreductase YP_006165293.1 3159938 D 595495 CDS YP_006165294.1 386701457 12763464 complement(3161105..3162313) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3162313 12763464 KO11_14860 Escherichia coli KO11FL IS10 transposase YP_006165294.1 3161105 R 595495 CDS YP_006165295.1 386701458 12763465 complement(3162483..3163763) 1 NC_017660.1 COG0582 Integrase; putative defective integrase, Qin prophage 3163763 intQ 12763465 intQ Escherichia coli KO11FL putative defective integrase, Qin prophage YP_006165295.1 3162483 R 595495 CDS YP_006165296.1 386701459 12763466 complement(3163798..3164049) 1 NC_017660.1 putative excisionase 3164049 12763466 KO11_14870 Escherichia coli KO11FL putative excisionase YP_006165296.1 3163798 R 595495 CDS YP_006165297.1 386701460 12763467 complement(3164122..3166599) 1 NC_017660.1 exonuclease RNase T and DNA polymerase III 3166599 12763467 KO11_14875 Escherichia coli KO11FL exonuclease RNase T and DNA polymerase III YP_006165297.1 3164122 R 595495 CDS YP_006165298.1 386701461 12763468 complement(3166692..3166883) 1 NC_017660.1 ydfD; hypothetical protein 3166883 12763468 KO11_14880 Escherichia coli KO11FL hypothetical protein YP_006165298.1 3166692 R 595495 CDS YP_006165299.1 386701462 12763469 complement(3166880..3167068) 1 NC_017660.1 putative regulator of cell division encoded by prophage 3167068 dicB 12763469 dicB Escherichia coli KO11FL putative regulator of cell division encoded by prophage YP_006165299.1 3166880 R 595495 CDS YP_006165300.1 386701463 12763470 complement(3167636..3167854) 1 NC_017660.1 hypothetical protein 3167854 ydfC 12763470 ydfC Escherichia coli KO11FL hypothetical protein YP_006165300.1 3167636 R 595495 CDS YP_006165301.1 386701464 12763471 complement(3167884..3168012) 1 NC_017660.1 ydfB; hypothetical protein 3168012 12763471 KO11_14895 Escherichia coli KO11FL hypothetical protein YP_006165301.1 3167884 R 595495 CDS YP_006165302.1 386701465 12763472 complement(3168014..3168169) 1 NC_017660.1 ydfA; hypothetical protein 3168169 12763472 KO11_14900 Escherichia coli KO11FL hypothetical protein YP_006165302.1 3168014 R 595495 CDS YP_006165303.1 386701466 12763473 complement(3168336..3168743) 1 NC_017660.1 COG1396 Predicted transcriptional regulators; transcriptional repressor DicA 3168743 dicA 12763473 dicA Escherichia coli KO11FL transcriptional repressor DicA YP_006165303.1 3168336 R 595495 CDS YP_006165304.1 386701467 12763474 3168827..3169057 1 NC_017660.1 DNA-binding transcriptional regulator DicC 3169057 dicC 12763474 dicC Escherichia coli KO11FL DNA-binding transcriptional regulator DicC YP_006165304.1 3168827 D 595495 CDS YP_006165305.1 386701468 12763475 3169041..3169562 1 NC_017660.1 ydfX; hypothetical protein 3169562 12763475 KO11_14915 Escherichia coli KO11FL hypothetical protein YP_006165305.1 3169041 D 595495 CDS YP_006165306.1 386701469 12763476 3169543..3170508 1 NC_017660.1 hypothetical protein 3170508 12763476 KO11_14920 Escherichia coli KO11FL hypothetical protein YP_006165306.1 3169543 D 595495 CDS YP_006165307.1 386701470 12763477 3170549..3170971 1 NC_017660.1 hypothetical protein 3170971 12763477 KO11_14925 Escherichia coli KO11FL hypothetical protein YP_006165307.1 3170549 D 595495 CDS YP_006165308.1 386701471 12763478 3170968..3171324 1 NC_017660.1 COG2890 Methylase of polypeptide chain release factors; hypothetical protein 3171324 12763478 KO11_14930 Escherichia coli KO11FL hypothetical protein YP_006165308.1 3170968 D 595495 CDS YP_006165309.1 386701472 12763479 3171587..3171697 1 NC_017660.1 hypothetical protein 3171697 12763479 KO11_14935 Escherichia coli KO11FL hypothetical protein YP_006165309.1 3171587 D 595495 CDS YP_006165310.1 386701473 12763480 3171935..3172045 1 NC_017660.1 hypothetical protein 3172045 12763480 KO11_14940 Escherichia coli KO11FL hypothetical protein YP_006165310.1 3171935 D 595495 CDS YP_006165311.1 386701474 12763481 3172477..3172656 1 NC_017660.1 hypothetical protein 3172656 12763481 KO11_14945 Escherichia coli KO11FL hypothetical protein YP_006165311.1 3172477 D 595495 CDS YP_006165312.1 386701475 12763482 3172991..3174304 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; integrase catalytic subunit 3174304 intK 12763482 intK Escherichia coli KO11FL integrase catalytic subunit YP_006165312.1 3172991 D 595495 CDS YP_006165313.1 386701476 12763483 complement(3174741..3175073) 1 NC_017660.1 COG0093 Ribosomal protein L14; flxA; hypothetical protein 3175073 12763483 KO11_14955 Escherichia coli KO11FL hypothetical protein YP_006165313.1 3174741 R 595495 CDS YP_006165314.1 386701477 12763484 3175606..3175845 1 NC_017660.1 COG3077 DNA-damage-inducible protein J; bifunctional antitoxin/transcriptional repressor RelB 3175845 relB 12763484 relB Escherichia coli KO11FL bifunctional antitoxin/transcriptional repressor RelB YP_006165314.1 3175606 D 595495 CDS YP_006165315.1 386701478 12763485 3175845..3176132 1 NC_017660.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; toxin component RelE 3176132 relE 12763485 relE Escherichia coli KO11FL toxin component RelE YP_006165315.1 3175845 D 595495 CDS YP_006165316.1 386701479 12763486 3176204..3176359 1 NC_017660.1 putative prophage maintenance protein 3176359 hokD 12763486 hokD Escherichia coli KO11FL putative prophage maintenance protein YP_006165316.1 3176204 D 595495 CDS YP_006165317.1 386701480 12763487 3176579..3176827 1 NC_017660.1 rem; hypothetical protein 3176827 12763487 KO11_14975 Escherichia coli KO11FL hypothetical protein YP_006165317.1 3176579 D 595495 CDS YP_006165318.1 386701481 12763488 3177174..3178223 1 NC_017660.1 ydfU; hypothetical protein 3178223 12763488 KO11_14980 Escherichia coli KO11FL hypothetical protein YP_006165318.1 3177174 D 595495 CDS YP_006165319.1 386701482 12763489 3178237..3178989 1 NC_017660.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; Qin prophage, putative antitermination protein Q 3178989 quuQ 12763489 quuQ Escherichia coli KO11FL Qin prophage, putative antitermination protein Q YP_006165319.1 3178237 D 595495 CDS YP_006165320.1 386701483 12763490 complement(3179411..3179623) 1 NC_017660.1 COG1278 Cold shock proteins; cold shock-like protein CspF 3179623 cspF 12763490 cspF Escherichia coli KO11FL cold shock-like protein CspF YP_006165320.1 3179411 R 595495 CDS YP_006165321.1 386701484 12763491 3179924..3180139 1 NC_017660.1 COG1278 Cold shock proteins; Qin prophage, cold shock protein 3180139 cspB 12763491 cspB Escherichia coli KO11FL Qin prophage, cold shock protein YP_006165321.1 3179924 D 595495 CDS YP_006165322.1 386701485 12763492 complement(3180555..3181763) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3181763 12763492 KO11_15000 Escherichia coli KO11FL IS10 transposase YP_006165322.1 3180555 R 595495 CDS YP_006165323.1 386701486 12763493 complement(3182079..3182198) 1 NC_017660.1 hypothetical protein 3182198 12763493 KO11_15002 Escherichia coli KO11FL hypothetical protein YP_006165323.1 3182079 R 595495 CDS YP_006165324.1 386701487 12763494 3182240..3182446 1 NC_017660.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; putative holin protein 3182446 12763494 KO11_15005 Escherichia coli KO11FL putative holin protein YP_006165324.1 3182240 D 595495 CDS YP_006165325.1 386701488 12763495 3182451..3182762 1 NC_017660.1 essQ; hypothetical protein 3182762 12763495 KO11_15010 Escherichia coli KO11FL hypothetical protein YP_006165325.1 3182451 D 595495 CDS YP_006165326.1 386701489 12763496 3182759..3183292 1 NC_017660.1 COG3772 Phage-related lysozyme (muraminidase); putative endolysin 3183292 arrQ 12763496 arrQ Escherichia coli KO11FL putative endolysin YP_006165326.1 3182759 D 595495 CDS YP_006165327.1 386701490 12763497 3183289..3183786 1 NC_017660.1 ydfP; hypothetical protein 3183786 12763497 KO11_15020 Escherichia coli KO11FL hypothetical protein YP_006165327.1 3183289 D 595495 CDS YP_006165328.1 386701491 12763498 3184149..3184361 1 NC_017660.1 COG1278 Cold shock proteins; putative cold shock protein 3184361 cspI 12763498 cspI Escherichia coli KO11FL putative cold shock protein YP_006165328.1 3184149 D 595495 CDS YP_006165329.1 386701492 12763499 3184708..3184863 1 NC_017660.1 ynfN; hypothetical protein 3184863 12763499 KO11_15030 Escherichia coli KO11FL hypothetical protein YP_006165329.1 3184708 D 595495 CDS YP_006165330.1 386701493 12763500 3185035..3185208 1 NC_017660.1 gnsB; hypothetical protein 3185208 12763500 KO11_15035 Escherichia coli KO11FL hypothetical protein YP_006165330.1 3185035 D 595495 CDS YP_006165331.1 386701494 12763501 complement(3185360..3185770) 1 NC_017660.1 ydfO; hypothetical protein 3185770 12763501 KO11_15040 Escherichia coli KO11FL hypothetical protein YP_006165331.1 3185360 R 595495 CDS YP_006165332.1 386701495 12763502 3186450..3186995 1 NC_017660.1 COG4220 Phage DNA packaging protein, Nu1 subunit of terminase; DNA packaging protein, DLP12 prophage 3186995 nohD 12763502 nohD Escherichia coli KO11FL DNA packaging protein, DLP12 prophage YP_006165332.1 3186450 D 595495 CDS YP_006165333.1 386701496 12763503 3186970..3188895 1 NC_017660.1 COG5525 Bacteriophage tail assembly protein; Terminase large subunit from bacteriophage origin 3188895 12763503 KO11_15050 Escherichia coli KO11FL Terminase large subunit from bacteriophage origin YP_006165333.1 3186970 D 595495 CDS YP_006165334.1 386701497 12763504 3188892..3189098 1 NC_017660.1 Lambda prophage-derived head-to-tail joining protein W 3189098 12763504 KO11_15055 Escherichia coli KO11FL Lambda prophage-derived head-to-tail joining protein W YP_006165334.1 3188892 D 595495 CDS YP_006165335.1 386701498 12763505 3189095..3190696 1 NC_017660.1 COG5511 Bacteriophage capsid protein; Portal protein, minor capsid protein [Contains: Protein B*] from bacteriophage origin 3190696 12763505 KO11_15060 Escherichia coli KO11FL Portal protein, minor capsid protein [Contains: Protein B*] from bacteriophage origin YP_006165335.1 3189095 D 595495 CDS YP_006165336.1 386701499 12763506 3190677..3191996 1 NC_017660.1 COG0616 Periplasmic serine proteases (ClpP class); Minor capsid protein [Contains: Capsid assembly protein NU3] from bacteriophage origin 3191996 12763506 KO11_15065 Escherichia coli KO11FL Minor capsid protein [Contains: Capsid assembly protein NU3] from bacteriophage origin YP_006165336.1 3190677 D 595495 CDS YP_006165337.1 386701500 12763507 3192006..3192338 1 NC_017660.1 bacteriophage lambda head decoration protein D 3192338 12763507 KO11_15070 Escherichia coli KO11FL bacteriophage lambda head decoration protein D YP_006165337.1 3192006 D 595495 CDS YP_006165338.1 386701501 12763508 3192394..3193419 1 NC_017660.1 putative major capsid protein 3193419 12763508 KO11_15075 Escherichia coli KO11FL putative major capsid protein YP_006165338.1 3192394 D 595495 CDS YP_006165339.1 386701502 12763509 3193461..3193859 1 NC_017660.1 putative DNA-packaging protein 3193859 12763509 KO11_15080 Escherichia coli KO11FL putative DNA-packaging protein YP_006165339.1 3193461 D 595495 CDS YP_006165340.1 386701503 12763510 3193871..3194224 1 NC_017660.1 putative head-tail joining protein of prophage 3194224 12763510 KO11_15085 Escherichia coli KO11FL putative head-tail joining protein of prophage YP_006165340.1 3193871 D 595495 CDS YP_006165341.1 386701504 12763511 3194236..3194814 1 NC_017660.1 putative minor tail protein 3194814 12763511 KO11_15090 Escherichia coli KO11FL putative minor tail protein YP_006165341.1 3194236 D 595495 CDS YP_006165342.1 386701505 12763512 3194811..3195206 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative minor tail protein 3195206 12763512 KO11_15095 Escherichia coli KO11FL putative minor tail protein YP_006165342.1 3194811 D 595495 CDS YP_006165343.1 386701506 12763513 3195214..3195954 1 NC_017660.1 COG5492 Bacterial surface proteins containing Ig-like domains; Ig domain-containing protein group 2 domain-containing protein 3195954 12763513 KO11_15100 Escherichia coli KO11FL Ig domain-containing protein group 2 domain-containing protein YP_006165343.1 3195214 D 595495 CDS YP_006165344.1 386701507 12763514 3195970..3196392 1 NC_017660.1 putative minor tail protein 3196392 12763514 KO11_15105 Escherichia coli KO11FL putative minor tail protein YP_006165344.1 3195970 D 595495 CDS YP_006165345.1 386701508 12763515 3196374..3196808 1 NC_017660.1 putative minor tail protein 3196808 12763515 KO11_15110 Escherichia coli KO11FL putative minor tail protein YP_006165345.1 3196374 D 595495 CDS YP_006165346.1 386701509 12763516 3196801..3199362 1 NC_017660.1 putative phage tail length tape measure protein 3199362 12763516 KO11_15115 Escherichia coli KO11FL putative phage tail length tape measure protein YP_006165346.1 3196801 D 595495 CDS YP_006165347.1 386701510 12763517 3199359..3199688 1 NC_017660.1 COG4718 Phage-related protein; Minor tail protein M 3199688 12763517 KO11_15120 Escherichia coli KO11FL Minor tail protein M YP_006165347.1 3199359 D 595495 CDS YP_006165348.1 386701511 12763518 3199688..3200386 1 NC_017660.1 COG4672 Phage-related protein; minor tail protein 3200386 12763518 KO11_15125 Escherichia coli KO11FL minor tail protein YP_006165348.1 3199688 D 595495 CDS YP_006165349.1 386701512 12763519 3200536..3201135 1 NC_017660.1 COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily; putative tail fiber component K of prophage 3201135 12763519 KO11_15130 Escherichia coli KO11FL putative tail fiber component K of prophage YP_006165349.1 3200536 D 595495 CDS YP_006165350.1 386701513 12763520 3201132..3201704 1 NC_017660.1 COG4723 Phage-related protein, tail component; Tail assembly protein I 3201704 12763520 KO11_15135 Escherichia coli KO11FL Tail assembly protein I YP_006165350.1 3201132 D 595495 CDS YP_006165351.1 386701514 12763521 3201765..3205178 1 NC_017660.1 COG4733 Phage-related protein, tail component; putative tail component of prophage CP-933K 3205178 12763521 KO11_15140 Escherichia coli KO11FL putative tail component of prophage CP-933K YP_006165351.1 3201765 D 595495 CDS YP_006165352.1 386701515 12763522 3205249..3205848 1 NC_017660.1 putative phage outer membrane protein 3205848 12763522 KO11_15145 Escherichia coli KO11FL putative phage outer membrane protein YP_006165352.1 3205249 D 595495 CDS YP_006165353.1 386701516 12763523 complement(3205849..3206022) 1 NC_017660.1 hypothetical protein 3206022 12763523 KO11_15150 Escherichia coli KO11FL hypothetical protein YP_006165353.1 3205849 R 595495 CDS YP_006165354.1 386701517 12763524 complement(3206410..3207207) 1 NC_017660.1 hypothetical protein 3207207 12763524 KO11_15155 Escherichia coli KO11FL hypothetical protein YP_006165354.1 3206410 R 595495 CDS YP_006165355.1 386701518 12763525 3207278..3208987 1 NC_017660.1 putative tail fiber protein 3208987 stfQ 12763525 stfQ Escherichia coli KO11FL putative tail fiber protein YP_006165355.1 3207278 D 595495 CDS YP_006165356.1 386701519 12763526 3208987..3209562 1 NC_017660.1 Qin prophage, putative tail fiber assembly protein 3209562 tfaQ 12763526 tfaQ Escherichia coli KO11FL Qin prophage, putative tail fiber assembly protein YP_006165356.1 3208987 D 595495 CDS YP_006165357.1 386701520 12763527 complement(3209660..3210016) 1 NC_017660.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs; truncated by IS10 insertion; Qin prophage, putative site-specific recombinase 3210016 pinQ 12763527 pinQ Escherichia coli KO11FL Qin prophage, putative site-specific recombinase YP_006165357.1 3209660 R 595495 CDS YP_006165358.1 386701521 12763528 3210232..3211440 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3211440 12763528 KO11_15175 Escherichia coli KO11FL IS10 transposase YP_006165358.1 3210232 D 595495 CDS YP_006165359.1 386701522 12763529 complement(3211419..3212336) 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator FeaR 3212336 feaR 12763529 feaR Escherichia coli KO11FL DNA-binding transcriptional activator FeaR YP_006165359.1 3211419 R 595495 CDS YP_006165360.1 386701523 12763530 3212572..3214071 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; phenylacetaldehyde dehydrogenase 3214071 feaB 12763530 feaB Escherichia coli KO11FL phenylacetaldehyde dehydrogenase YP_006165360.1 3212572 D 595495 CDS YP_006165361.1 386701524 12763531 complement(3214129..3216402) 1 NC_017660.1 COG3733 Cu2+-containing amine oxidase; tyramine oxidase 3216402 tynA 12763531 tynA Escherichia coli KO11FL tyramine oxidase YP_006165361.1 3214129 R 595495 CDS YP_006165362.1 386701525 12763532 complement(3216650..3218695) 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 3218695 paaZ 12763532 paaZ Escherichia coli KO11FL bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase YP_006165362.1 3216650 R 595495 CDS YP_006165363.1 386701526 12763533 3218980..3219909 1 NC_017660.1 COG3396 Uncharacterized conserved protein; phenylacetate-CoA oxygenase subunit PaaA 3219909 paaA 12763533 paaA Escherichia coli KO11FL phenylacetate-CoA oxygenase subunit PaaA YP_006165363.1 3218980 D 595495 CDS YP_006165364.1 386701527 12763534 3219921..3220208 1 NC_017660.1 COG3460 Uncharacterized enzyme of phenylacetate metabolism; phenylacetate-CoA oxygenase subunit PaaB 3220208 paaB 12763534 paaB Escherichia coli KO11FL phenylacetate-CoA oxygenase subunit PaaB YP_006165364.1 3219921 D 595495 CDS YP_006165365.1 386701528 12763535 3220217..3220963 1 NC_017660.1 COG3396 Uncharacterized conserved protein; putative multicomponent oxygenase/reductase subunit 3220963 paaC 12763535 paaC Escherichia coli KO11FL putative multicomponent oxygenase/reductase subunit YP_006165365.1 3220217 D 595495 CDS YP_006165366.1 386701529 12763536 3220978..3221475 1 NC_017660.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme; putative multicomponent oxygenase/reductase subunit 3221475 paaD 12763536 paaD Escherichia coli KO11FL putative multicomponent oxygenase/reductase subunit YP_006165366.1 3220978 D 595495 CDS YP_006165367.1 386701530 12763537 3221483..3222553 1 NC_017660.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; ferredoxin reductase electron transfer component 3222553 paaE 12763537 paaE Escherichia coli KO11FL ferredoxin reductase electron transfer component YP_006165367.1 3221483 D 595495 CDS YP_006165368.1 386701531 12763538 3222550..3223317 1 NC_017660.1 COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase-isomerase 3223317 paaF 12763538 paaF Escherichia coli KO11FL enoyl-CoA hydratase-isomerase YP_006165368.1 3222550 D 595495 CDS YP_006165369.1 386701532 12763539 3223317..3224105 1 NC_017660.1 COG1024 Enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase 3224105 paaG 12763539 paaG Escherichia coli KO11FL enoyl-CoA hydratase YP_006165369.1 3223317 D 595495 CDS YP_006165370.1 386701533 12763540 3224107..3225534 1 NC_017660.1 COG1250 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase 3225534 paaH 12763540 paaH Escherichia coli KO11FL 3-hydroxyacyl-CoA dehydrogenase YP_006165370.1 3224107 D 595495 CDS YP_006165371.1 386701534 12763541 3225524..3225946 1 NC_017660.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; putative thioesterase 3225946 paaI 12763541 paaI Escherichia coli KO11FL putative thioesterase YP_006165371.1 3225524 D 595495 CDS YP_006165372.1 386701535 12763542 3225946..3227151 1 NC_017660.1 COG0183 Acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase 3227151 paaJ 12763542 paaJ Escherichia coli KO11FL beta-ketoadipyl CoA thiolase YP_006165372.1 3225946 D 595495 CDS YP_006165373.1 386701536 12763543 3227178..3228491 1 NC_017660.1 COG1541 Coenzyme F390 synthetase; phenylacetate-CoA ligase 3228491 paaK 12763543 paaK Escherichia coli KO11FL phenylacetate-CoA ligase YP_006165373.1 3227178 D 595495 CDS YP_006165374.1 386701537 12763544 3228592..3229542 1 NC_017660.1 COG3327 Phenylacetic acid-responsive transcriptional repressor; transcriptional repressor for phenylacetic acid degradation 3229542 paaX 12763544 paaX Escherichia coli KO11FL transcriptional repressor for phenylacetic acid degradation YP_006165374.1 3228592 D 595495 CDS YP_006165375.1 386701538 12763545 3229524..3230114 1 NC_017660.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; putative hexapeptide repeat acetyltransferase 3230114 paaY 12763545 paaY Escherichia coli KO11FL putative hexapeptide repeat acetyltransferase YP_006165375.1 3229524 D 595495 CDS YP_006165376.1 386701539 12763546 3230345..3231205 1 NC_017660.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative oxidoreductase 3231205 ydbC 12763546 ydbC Escherichia coli KO11FL putative oxidoreductase YP_006165376.1 3230345 D 595495 CDS YP_006165377.1 386701540 12763547 3231269..3233575 1 NC_017660.1 ydbD; hypothetical protein 3233575 12763547 KO11_15270 Escherichia coli KO11FL hypothetical protein YP_006165377.1 3231269 D 595495 CDS YP_006165378.1 386701541 12763548 3233746..3234351 1 NC_017660.1 COG0558 Phosphatidylglycerophosphate synthase; ynbA; hypothetical protein 3234351 12763548 KO11_15275 Escherichia coli KO11FL hypothetical protein YP_006165378.1 3233746 D 595495 CDS YP_006165379.1 386701542 12763549 3234351..3235247 1 NC_017660.1 COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; putative membrane associated CTP-phosphosubstrate transferase 3235247 ynbB 12763549 ynbB Escherichia coli KO11FL putative membrane associated CTP-phosphosubstrate transferase YP_006165379.1 3234351 D 595495 CDS YP_006165380.1 386701543 12763550 3235263..3237020 1 NC_017660.1 COG2267 Lysophospholipase; putative hydrolase 3237020 ynbC 12763550 ynbC Escherichia coli KO11FL putative hydrolase YP_006165380.1 3235263 D 595495 CDS YP_006165381.1 386701544 12763551 3237010..3238326 1 NC_017660.1 COG0671 Membrane-associated phospholipid phosphatase; putative dual specificity phosphatase 3238326 ynbD 12763551 ynbD Escherichia coli KO11FL putative dual specificity phosphatase YP_006165381.1 3237010 D 595495 CDS YP_006165382.1 386701545 12763552 complement(3238377..3238982) 1 NC_017660.1 COG1182 Acyl carrier protein phosphodiesterase; azoreductase 3238982 azoR 12763552 azoR Escherichia coli KO11FL azoreductase YP_006165382.1 3238377 R 595495 CDS YP_006165383.1 386701546 12763553 3239183..3243085 1 NC_017660.1 COG1643 HrpA-like helicases; ATP-dependent RNA helicase HrpA 3243085 hrpA 12763553 hrpA Escherichia coli KO11FL ATP-dependent RNA helicase HrpA YP_006165383.1 3239183 D 595495 CDS YP_006165384.1 386701547 12763554 3243357..3244157 1 NC_017660.1 COG1434 Uncharacterized conserved protein; ydcF; hypothetical protein 3244157 12763554 KO11_15305 Escherichia coli KO11FL hypothetical protein YP_006165384.1 3243357 D 595495 CDS YP_006165385.1 386701548 12763555 3244354..3245793 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase A 3245793 aldA 12763555 aldA Escherichia coli KO11FL aldehyde dehydrogenase A YP_006165385.1 3244354 D 595495 CDS YP_006165386.1 386701549 12763556 complement(3245835..3246836) 1 NC_017660.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 3246836 gapC 12763556 gapC Escherichia coli KO11FL glyceraldehyde-3-phosphate dehydrogenase YP_006165386.1 3245835 R 595495 CDS YP_006165387.1 386701550 12763557 3246989..3247555 1 NC_017660.1 COG3038 Cytochrome B561; cytochrome b561 3247555 cybB 12763557 cybB Escherichia coli KO11FL cytochrome b561 YP_006165387.1 3246989 D 595495 CDS YP_006165388.1 386701551 12763558 3247800..3247973 1 NC_017660.1 ydcA; hypothetical protein 3247973 12763558 KO11_15325 Escherichia coli KO11FL hypothetical protein YP_006165388.1 3247800 D 595495 CDS YP_006165389.1 386701552 12763559 complement(3248045..3248194) 1 NC_017660.1 small toxic polypeptide 3248194 hokB 12763559 hokB Escherichia coli KO11FL small toxic polypeptide YP_006165389.1 3248045 R 595495 CDS YP_006165390.1 386701553 12763560 complement(3248085..3248252) 1 NC_017660.1 regulatory peptide whose translation enables hokB expression 3248252 mokB 12763560 mokB Escherichia coli KO11FL regulatory peptide whose translation enables hokB expression YP_006165390.1 3248085 R 595495 CDS YP_006165391.1 386701554 12763561 3248593..3250233 1 NC_017660.1 COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein III, riboseand galactose sensor receptor 3250233 trg 12763561 trg Escherichia coli KO11FL methyl-accepting chemotaxis protein III, riboseand galactose sensor receptor YP_006165391.1 3248593 D 595495 CDS YP_006165392.1 386701555 12763562 complement(3250271..3251194) 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 3251194 ydcI 12763562 ydcI Escherichia coli KO11FL LysR family transcriptional regulator YP_006165392.1 3250271 R 595495 CDS YP_006165393.1 386701556 12763563 3251411..3252754 1 NC_017660.1 COG5383 Uncharacterized protein conserved in bacteria; ydcJ; hypothetical protein 3252754 12763563 KO11_15345 Escherichia coli KO11FL hypothetical protein YP_006165393.1 3251411 D 595495 CDS YP_006165394.1 386701557 12763564 3253015..3254634 1 NC_017660.1 COG3131 Periplasmic glucans biosynthesis protein; glucan biosynthesis protein D 3254634 mdoD 12763564 mdoD Escherichia coli KO11FL glucan biosynthesis protein D YP_006165394.1 3253015 D 595495 CDS YP_006165395.1 386701558 12763565 3254774..3254998 1 NC_017660.1 COG2841 Uncharacterized protein conserved in bacteria; ydcH; hypothetical protein 3254998 12763565 KO11_15360 Escherichia coli KO11FL hypothetical protein YP_006165395.1 3254774 D 595495 CDS YP_006165396.1 386701559 12763566 3255061..3255597 1 NC_017660.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; ribosomal-protein-L7/L12-serine acetyltransferase 3255597 rimL 12763566 rimL Escherichia coli KO11FL ribosomal-protein-L7/L12-serine acetyltransferase YP_006165396.1 3255061 D 595495 CDS YP_006165397.1 386701560 12763567 complement(3255592..3256572) 1 NC_017660.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); ydcK; hypothetical protein 3256572 12763567 KO11_15370 Escherichia coli KO11FL hypothetical protein YP_006165397.1 3255592 R 595495 CDS YP_006165398.1 386701561 12763568 3256696..3257688 1 NC_017660.1 COG1275 Tellurite resistance protein and related permeases; potassium-tellurite ethidium and proflavin transporter 3257688 tehA 12763568 tehA Escherichia coli KO11FL potassium-tellurite ethidium and proflavin transporter YP_006165398.1 3256696 D 595495 CDS YP_006165399.1 386701562 12763569 3257685..3258278 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; tellurite resistance protein TehB 3258278 tehB 12763569 tehB Escherichia coli KO11FL tellurite resistance protein TehB YP_006165399.1 3257685 D 595495 CDS YP_006165400.1 386701563 12763570 3258581..3259249 1 NC_017660.1 ydcL; hypothetical protein 3259249 12763570 KO11_15385 Escherichia coli KO11FL hypothetical protein YP_006165400.1 3258581 D 595495 CDS YP_006165401.1 386701564 12763572 3259835..3260983 1 NC_017660.1 COG0675 Transposase and inactivated derivatives; putative IS609 transposase TnpB 3260983 12763572 KO11_15400 Escherichia coli KO11FL putative IS609 transposase TnpB YP_006165401.1 3259835 D 595495 CDS YP_006165402.1 386701565 12763573 complement(3261023..3262198) 1 NC_017660.1 COG3135 Uncharacterized protein involved in benzoate metabolism; putative benzoate transporter 3262198 ydcO 12763573 ydcO Escherichia coli KO11FL putative benzoate transporter YP_006165402.1 3261023 R 595495 CDS YP_006165403.1 386701566 12763574 3262290..3262826 1 NC_017660.1 COG1396 Predicted transcriptional regulators; putative DNA-binding transcriptional regulator 3262826 ydcN 12763574 ydcN Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006165403.1 3262290 D 595495 CDS YP_006165404.1 386701567 12763575 3262899..3264860 1 NC_017660.1 COG0826 Collagenase and related proteases; Peptidase, U32 family protein 3264860 ydcP 12763575 ydcP Escherichia coli KO11FL Peptidase, U32 family protein YP_006165404.1 3262899 D 595495 CDS YP_006165405.1 386701568 12763576 complement(3264952..3265182) 1 NC_017660.1 yncJ; hypothetical protein 3265182 12763576 KO11_15420 Escherichia coli KO11FL hypothetical protein YP_006165405.1 3264952 R 595495 CDS YP_006165406.1 386701569 12763577 3265404..3265580 1 NC_017660.1 mRNA interferase toxin of the HicAB toxin-antitoxin system 3265580 hicA 12763577 hicA Escherichia coli KO11FL mRNA interferase toxin of the HicAB toxin-antitoxin system YP_006165406.1 3265404 D 595495 CDS YP_006165407.1 386701570 12763578 3265605..3266042 1 NC_017660.1 COG1598 Uncharacterized conserved protein; antitoxin for the HicAB toxin-antitoxin system, mutational suppressor of null rpoE lethality 3266042 hicB 12763578 hicB Escherichia coli KO11FL antitoxin for the HicAB toxin-antitoxin system, mutational suppressor of null rpoE lethality YP_006165407.1 3265605 D 595495 CDS YP_006165408.1 386701571 12763579 3266121..3267527 1 NC_017660.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; putative transcriptional regulator 3267527 ydcR 12763579 ydcR Escherichia coli KO11FL putative transcriptional regulator YP_006165408.1 3266121 D 595495 CDS YP_006165409.1 386701572 12763580 3267772..3268917 1 NC_017660.1 COG0687 Spermidine/putrescine-binding periplasmic protein; putative spermidine/putrescine transporter subunit 3268917 ydcS 12763580 ydcS Escherichia coli KO11FL putative spermidine/putrescine transporter subunit YP_006165409.1 3267772 D 595495 CDS YP_006165410.1 386701573 12763581 3268935..3269948 1 NC_017660.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; putative spermidine/putrescine transporter subunit 3269948 ydcT 12763581 ydcT Escherichia coli KO11FL putative spermidine/putrescine transporter subunit YP_006165410.1 3268935 D 595495 CDS YP_006165411.1 386701574 12763582 3269949..3270890 1 NC_017660.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I; ABC transporter permease 3270890 ydcU 12763582 ydcU Escherichia coli KO11FL ABC transporter permease YP_006165411.1 3269949 D 595495 CDS YP_006165412.1 386701575 12763583 3270880..3271674 1 NC_017660.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II; spermidine/putrescine ABC transporter membrane protein 3271674 ydcV 12763583 ydcV Escherichia coli KO11FL spermidine/putrescine ABC transporter membrane protein YP_006165412.1 3270880 D 595495 CDS YP_006165413.1 386701576 12763584 3271696..3273120 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; gamma-aminobutyraldehyde dehydrogenase 3273120 prr 12763584 prr Escherichia coli KO11FL gamma-aminobutyraldehyde dehydrogenase YP_006165413.1 3271696 D 595495 CDS YP_006165414.1 386701577 12763585 3273432..3273680 1 NC_017660.1 ydcX; hypothetical protein 3273680 12763585 KO11_15465 Escherichia coli KO11FL hypothetical protein YP_006165414.1 3273432 D 595495 CDS YP_006165415.1 386701578 12763586 3273766..3273999 1 NC_017660.1 ydcY; hypothetical protein 3273999 12763586 KO11_15470 Escherichia coli KO11FL hypothetical protein YP_006165415.1 3273766 D 595495 CDS YP_006165416.1 386701579 12763587 complement(3274000..3274449) 1 NC_017660.1 COG3238 Uncharacterized protein conserved in bacteria; putative inner membrane protein 3274449 ydcV2 12763587 ydcV2 Escherichia coli KO11FL putative inner membrane protein YP_006165416.1 3274000 R 595495 CDS YP_006165417.1 386701580 12763588 complement(3274446..3274964) 1 NC_017660.1 COG1247 Sortase and related acyltransferases; N-acetyltransferase GCN5 3274964 yncA 12763588 yncA Escherichia coli KO11FL N-acetyltransferase GCN5 YP_006165417.1 3274446 R 595495 CDS YP_006165418.1 386701581 12763589 3275145..3276182 1 NC_017660.1 COG2130 Putative NADP-dependent oxidoreductases; putative oxidoreductase 3276182 yncB 12763589 yncB Escherichia coli KO11FL putative oxidoreductase YP_006165418.1 3275145 D 595495 CDS YP_006165419.1 386701582 12763590 3276380..3276493 1 NC_017660.1 colanic acid/biofilm transcriptional regulator 3276493 mcbR 12763590 mcbR Escherichia coli KO11FL colanic acid/biofilm transcriptional regulator YP_006165419.1 3276380 D 595495 CDS YP_006165420.1 386701583 12763591 3276563..3277771 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3277771 12763591 KO11_15495 Escherichia coli KO11FL IS10 transposase YP_006165420.1 3276563 D 595495 CDS YP_006165421.1 386701584 12763592 3277768..3279183 1 NC_017660.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; 6-phospho-beta-glucosidase 3279183 bcgA 12763592 bcgA Escherichia coli KO11FL 6-phospho-beta-glucosidase YP_006165421.1 3277768 D 595495 CDS YP_006165422.1 386701585 12763593 complement(3279240..3279458) 1 NC_017660.1 marB; hypothetical protein 3279458 12763593 KO11_15505 Escherichia coli KO11FL hypothetical protein YP_006165422.1 3279240 R 595495 CDS YP_006165423.1 386701586 12763594 complement(3279490..3279873) 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator MarA 3279873 marA 12763594 marA Escherichia coli KO11FL DNA-binding transcriptional activator MarA YP_006165423.1 3279490 R 595495 CDS YP_006165424.1 386701587 12763595 complement(3279893..3280327) 1 NC_017660.1 COG1846 Transcriptional regulators; DNA-binding transcriptional repressor MarR 3280327 marR 12763595 marR Escherichia coli KO11FL DNA-binding transcriptional repressor MarR YP_006165424.1 3279893 R 595495 CDS YP_006165425.1 386701588 12763596 3280539..3281204 1 NC_017660.1 COG2095 Multiple antibiotic transporter; inner membrane protein 3281204 marC 12763596 marC Escherichia coli KO11FL inner membrane protein YP_006165425.1 3280539 D 595495 CDS YP_006165426.1 386701589 12763597 complement(3281229..3282419) 1 NC_017660.1 COG2814 Arabinose efflux permease; putative arabinose transporter 3282419 ydeA 12763597 ydeA Escherichia coli KO11FL putative arabinose transporter YP_006165426.1 3281229 R 595495 CDS YP_006165427.1 386701590 12763598 complement(3282569..3283276) 1 NC_017660.1 yneK; hypothetical protein 3283276 12763598 KO11_15530 Escherichia coli KO11FL hypothetical protein YP_006165427.1 3282569 R 595495 CDS YP_006165428.1 386701591 12763599 complement(3283761..3284642) 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 3284642 yneJ 12763599 yneJ Escherichia coli KO11FL LysR family transcriptional regulator YP_006165428.1 3283761 R 595495 CDS YP_006165429.1 386701592 12763600 3284743..3286131 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; putative succinate-semialdehyde dehydrogenase 3286131 sad 12763600 sad Escherichia coli KO11FL putative succinate-semialdehyde dehydrogenase YP_006165429.1 3284743 D 595495 CDS YP_006165430.1 386701593 12763601 3286195..3287121 1 NC_017660.1 COG2066 Glutaminase; glutaminase 3287121 yneH 12763601 yneH Escherichia coli KO11FL glutaminase YP_006165430.1 3286195 D 595495 CDS YP_006165431.1 386701594 12763602 3287121..3287480 1 NC_017660.1 yneG; hypothetical protein 3287480 12763602 KO11_15550 Escherichia coli KO11FL hypothetical protein YP_006165431.1 3287121 D 595495 CDS YP_006165432.1 386701595 12763603 3287619..3289037 1 NC_017660.1 COG2199 FOG: GGDEF domain; diguanylate cyclase 3289037 yneF 12763603 yneF Escherichia coli KO11FL diguanylate cyclase YP_006165432.1 3287619 D 595495 CDS YP_006165433.1 386701596 12763604 3289264..3290715 1 NC_017660.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases; altronate oxidoreductase 3290715 uxaB 12763604 uxaB Escherichia coli KO11FL altronate oxidoreductase YP_006165433.1 3289264 D 595495 CDS YP_006165434.1 386701597 12763605 3290922..3291836 1 NC_017660.1 COG3781 Predicted membrane protein; hypothetical protein 3291836 yneE 12763605 yneE Escherichia coli KO11FL hypothetical protein YP_006165434.1 3290922 D 595495 CDS YP_006165435.1 386701598 12763606 complement(3291840..3292598) 1 NC_017660.1 COG4106 Trans-aconitate methyltransferase; trans-aconitate 2-methyltransferase 3292598 tam 12763606 tam Escherichia coli KO11FL trans-aconitate 2-methyltransferase YP_006165435.1 3291840 R 595495 CDS YP_006165436.1 386701599 12763607 complement(3292655..3292945) 1 NC_017660.1 COG1359 Uncharacterized conserved protein; autoinducer-2 (AI-2) modifying protein LsrG 3292945 lsrG 12763607 lsrG Escherichia coli KO11FL autoinducer-2 (AI-2) modifying protein LsrG YP_006165436.1 3292655 R 595495 CDS YP_006165437.1 386701600 12763608 complement(3292969..3293844) 1 NC_017660.1 COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; autoinducer 2 aldolase 3293844 lsrF 12763608 lsrF Escherichia coli KO11FL autoinducer 2 aldolase YP_006165437.1 3292969 R 595495 CDS YP_006165438.1 386701601 12763609 complement(3293871..3294893) 1 NC_017660.1 COG1879 ABC-type sugar transport system, periplasmic component; autoinducer 2-binding protein lsrB 3294893 lsrB 12763609 lsrB Escherichia coli KO11FL autoinducer 2-binding protein lsrB YP_006165438.1 3293871 R 595495 CDS YP_006165439.1 386701602 12763610 complement(3294905..3295897) 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; autoinducer 2 import system permease LsrD 3295897 lsrD 12763610 lsrD Escherichia coli KO11FL autoinducer 2 import system permease LsrD YP_006165439.1 3294905 R 595495 CDS YP_006165440.1 386701603 12763611 complement(3295897..3296925) 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; autoinducer 2 ABC transporter permease LsrC 3296925 lsrC 12763611 lsrC Escherichia coli KO11FL autoinducer 2 ABC transporter permease LsrC YP_006165440.1 3295897 R 595495 CDS YP_006165441.1 386701604 12763612 complement(3296919..3298454) 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; autoinducer 2 ABC transporter ATP-binding protein LsrA 3298454 lsrA 12763612 lsrA Escherichia coli KO11FL autoinducer 2 ABC transporter ATP-binding protein LsrA YP_006165441.1 3296919 R 595495 CDS YP_006165442.1 386701605 12763613 3298703..3299656 1 NC_017660.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain; transcriptional regulator LsrR 3299656 lsrR 12763613 lsrR Escherichia coli KO11FL transcriptional regulator LsrR YP_006165442.1 3298703 D 595495 CDS YP_006165443.1 386701606 12763614 3299777..3301327 1 NC_017660.1 COG1070 Sugar (pentulose and hexulose) kinases; autoinducer-2 (AI-2) kinase 3301327 lsrK 12763614 lsrK Escherichia coli KO11FL autoinducer-2 (AI-2) kinase YP_006165443.1 3299777 D 595495 CDS YP_006165444.1 386701607 12763615 3301876..3303084 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3303084 12763615 KO11_15615 Escherichia coli KO11FL IS10 transposase YP_006165444.1 3301876 D 595495 CDS YP_006165445.1 386701608 12763616 3307216..3308616 1 NC_017660.1 COG3468 Type V secretory pathway, adhesin AidA; putative lipoprotein/autotransporter domain-containing protein 3308616 ydeK 12763616 ydeK Escherichia coli KO11FL putative lipoprotein/autotransporter domain-containing protein YP_006165445.1 3307216 D 595495 CDS YP_006165446.1 386701609 12763617 3308825..3309091 1 NC_017660.1 COG1396 Predicted transcriptional regulators; antitoxin HipB 3309091 hipB 12763617 hipB Escherichia coli KO11FL antitoxin HipB YP_006165446.1 3308825 D 595495 CDS YP_006165447.1 386701610 12763618 3309091..3310413 1 NC_017660.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes; regulator with hipB 3310413 hipA 12763618 hipA Escherichia coli KO11FL regulator with hipB YP_006165447.1 3309091 D 595495 CDS YP_006165448.1 386701611 12763619 3310731..3310910 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative transcriptional regulator 3310910 yneL 12763619 yneL Escherichia coli KO11FL putative transcriptional regulator YP_006165448.1 3310731 D 595495 CDS YP_006165449.1 386701612 12763620 3311365..3311928 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative major fimbrial subunit 3311928 egoA 12763620 egoA Escherichia coli KO11FL putative major fimbrial subunit YP_006165449.1 3311365 D 595495 CDS YP_006165450.1 386701613 12763621 3312289..3312999 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; putative fimbrial chaperone protein 3312999 egoB 12763621 egoB Escherichia coli KO11FL putative fimbrial chaperone protein YP_006165450.1 3312289 D 595495 CDS YP_006165451.1 386701614 12763622 3313041..3315692 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein 3315692 ydeT 12763622 ydeT Escherichia coli KO11FL outer membrane usher protein YP_006165451.1 3313041 D 595495 CDS YP_006165452.1 386701615 12763623 3315706..3316236 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; biofilm-dependent modulation protein 3316236 ydeS 12763623 ydeS Escherichia coli KO11FL biofilm-dependent modulation protein YP_006165452.1 3315706 D 595495 CDS YP_006165453.1 386701616 12763624 3316249..3316752 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like adhesin exported protein 3316752 ydeR 12763624 ydeR Escherichia coli KO11FL putative fimbrial-like adhesin exported protein YP_006165453.1 3316249 D 595495 CDS YP_006165454.1 386701617 12763625 3316812..3317726 1 NC_017660.1 putative fimbrial-like exported adhesin protein 3317726 ydeQ 12763625 ydeQ Escherichia coli KO11FL putative fimbrial-like exported adhesin protein YP_006165454.1 3316812 D 595495 CDS YP_006165455.1 386701618 12763626 3318060..3320339 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; putative oxidoreductase 3320339 ydeP 12763626 ydeP Escherichia coli KO11FL putative oxidoreductase YP_006165455.1 3318060 D 595495 CDS YP_006165456.1 386701619 12763627 3320587..3320784 1 NC_017660.1 safA; hypothetical protein 3320784 12763627 KO11_15675 Escherichia coli KO11FL hypothetical protein YP_006165456.1 3320587 D 595495 CDS YP_006165457.1 386701620 12763628 3320859..3321620 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator YdeO 3321620 ydeO 12763628 ydeO Escherichia coli KO11FL transcriptional regulator YdeO YP_006165457.1 3320859 D 595495 CDS YP_006165458.1 386701621 12763629 3322085..3322897 1 NC_017660.1 fragmented by IS10 insertion; COG3119 Arylsulfatase A and related enzymes; putative sulfatase 3322897 ydeN 12763629 ydeN Escherichia coli KO11FL putative sulfatase YP_006165458.1 3322085 D 595495 CDS YP_006165459.1 386701622 12763630 complement(3323509..3324102) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3324102 12763630 KO11_15690 Escherichia coli KO11FL IS10 transposase YP_006165459.1 3323509 R 595495 CDS YP_006165460.1 386701623 12763631 complement(3325031..3325357) 1 NC_017660.1 COG3784 Uncharacterized protein conserved in bacteria; ydbL; hypothetical protein 3325357 12763631 KO11_15695 Escherichia coli KO11FL hypothetical protein YP_006165460.1 3325031 R 595495 CDS YP_006165461.1 386701624 12763632 complement(3325365..3325550) 1 NC_017660.1 putative lipoprotein 3325550 ynbE 12763632 ynbE Escherichia coli KO11FL putative lipoprotein YP_006165461.1 3325365 R 595495 CDS YP_006165462.1 386701625 12763633 complement(3325547..3328186) 1 NC_017660.1 ydbH; hypothetical protein 3328186 12763633 KO11_15705 Escherichia coli KO11FL hypothetical protein YP_006165462.1 3325547 R 595495 CDS YP_006165463.1 386701626 12763634 3328394..3329383 1 NC_017660.1 COG1052 Lactate dehydrogenase and related dehydrogenases; D-lactate dehydrogenase 3329383 ldhA 12763634 ldhA Escherichia coli KO11FL D-lactate dehydrogenase YP_006165463.1 3328394 D 595495 CDS YP_006165464.1 386701627 12763635 3329494..3329916 1 NC_017660.1 COG3187 Heat shock protein; heat-inducible protein 3329916 hslJ 12763635 hslJ Escherichia coli KO11FL heat-inducible protein YP_006165464.1 3329494 D 595495 CDS YP_006165465.1 386701628 12763636 complement(3329913..3330179) 1 NC_017660.1 COG3042 Putative hemolysin; ydbJ; hypothetical protein 3330179 12763636 KO11_15720 Escherichia coli KO11FL hypothetical protein YP_006165465.1 3329913 R 595495 CDS YP_006165466.1 386701629 12763637 3330453..3333977 1 NC_017660.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; ydbK; hypothetical protein 3333977 12763637 KO11_15725 Escherichia coli KO11FL hypothetical protein YP_006165466.1 3330453 D 595495 CDS YP_006165467.1 386701630 12763638 3334344..3335477 1 NC_017660.1 COG3203 Outer membrane protein (porin); outer membrane pore protein N, non-specific 3335477 ompN 12763638 ompN Escherichia coli KO11FL outer membrane pore protein N, non-specific YP_006165467.1 3334344 D 595495 CDS YP_006165468.1 386701631 12763639 3335618..3336052 1 NC_017660.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein F 3336052 uspF 12763639 uspF Escherichia coli KO11FL universal stress protein F YP_006165468.1 3335618 D 595495 CDS YP_006165469.1 386701632 12763640 complement(3336336..3336479) 1 NC_017660.1 hypothetical protein 3336479 12763640 KO11_15740 Escherichia coli KO11FL hypothetical protein YP_006165469.1 3336336 R 595495 CDS YP_006165470.1 386701633 12763641 complement(3336592..3337164) 1 NC_017660.1 hypothetical protein 3337164 12763641 KO11_15745 Escherichia coli KO11FL hypothetical protein YP_006165470.1 3336592 R 595495 CDS YP_006165471.1 386701634 12763642 complement(3337179..3340319) 1 NC_017660.1 putative phage tail fiber protein 3340319 12763642 KO11_15750 Escherichia coli KO11FL putative phage tail fiber protein YP_006165471.1 3337179 R 595495 CDS YP_006165472.1 386701635 12763643 complement(3340343..3340888) 1 NC_017660.1 COG1949 Oligoribonuclease (3->5 exoribonuclease); putative tail fiber assembly protein 3340888 12763643 KO11_15755 Escherichia coli KO11FL putative tail fiber assembly protein YP_006165472.1 3340343 R 595495 CDS YP_006165473.1 386701636 12763644 complement(3340891..3342444) 1 NC_017660.1 putative tail fiber protein 3342444 12763644 KO11_15760 Escherichia coli KO11FL putative tail fiber protein YP_006165473.1 3340891 R 595495 CDS YP_006165474.1 386701637 12763645 complement(3342441..3343067) 1 NC_017660.1 hypothetical protein 3343067 12763645 KO11_15765 Escherichia coli KO11FL hypothetical protein YP_006165474.1 3342441 R 595495 CDS YP_006165475.1 386701638 12763646 complement(3343051..3344256) 1 NC_017660.1 hypothetical protein 3344256 12763646 KO11_15770 Escherichia coli KO11FL hypothetical protein YP_006165475.1 3343051 R 595495 CDS YP_006165476.1 386701639 12763647 3344533..3344838 1 NC_017660.1 hypothetical protein 3344838 12763647 KO11_15775 Escherichia coli KO11FL hypothetical protein YP_006165476.1 3344533 D 595495 CDS YP_006165477.1 386701640 12763648 3344879..3345253 1 NC_017660.1 COG3561 Phage anti-repressor protein; putative antirepressor 3345253 12763648 KO11_15780 Escherichia coli KO11FL putative antirepressor YP_006165477.1 3344879 D 595495 CDS YP_006165478.1 386701641 12763649 complement(3345229..3345576) 1 NC_017660.1 hypothetical protein 3345576 12763649 KO11_15785 Escherichia coli KO11FL hypothetical protein YP_006165478.1 3345229 R 595495 CDS YP_006165479.1 386701642 12763650 complement(3345584..3345730) 1 NC_017660.1 hypothetical protein 3345730 12763650 KO11_15790 Escherichia coli KO11FL hypothetical protein YP_006165479.1 3345584 R 595495 CDS YP_006165480.1 386701643 12763651 complement(3345966..3346163) 1 NC_017660.1 hypothetical protein 3346163 12763651 KO11_15795 Escherichia coli KO11FL hypothetical protein YP_006165480.1 3345966 R 595495 CDS YP_006165481.1 386701644 12763652 complement(3346273..3346986) 1 NC_017660.1 putative phage baseplate protein 3346986 12763652 KO11_15800 Escherichia coli KO11FL putative phage baseplate protein YP_006165481.1 3346273 R 595495 CDS YP_006165482.1 386701645 12763653 complement(3346986..3347993) 1 NC_017660.1 hypothetical protein 3347993 12763653 KO11_15805 Escherichia coli KO11FL hypothetical protein YP_006165482.1 3346986 R 595495 CDS YP_006165483.1 386701646 12763654 complement(3347993..3348259) 1 NC_017660.1 hypothetical protein 3348259 12763654 KO11_15810 Escherichia coli KO11FL hypothetical protein YP_006165483.1 3347993 R 595495 CDS YP_006165484.1 386701647 12763655 complement(3348256..3348924) 1 NC_017660.1 hypothetical protein 3348924 12763655 KO11_15815 Escherichia coli KO11FL hypothetical protein YP_006165484.1 3348256 R 595495 CDS YP_006165485.1 386701648 12763656 complement(3348928..3350916) 1 NC_017660.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic transglycosylase, catalytic 3350916 12763656 KO11_15820 Escherichia coli KO11FL lytic transglycosylase, catalytic YP_006165485.1 3348928 R 595495 CDS YP_006165486.1 386701649 12763657 complement(3350980..3351597) 1 NC_017660.1 hypothetical protein 3351597 12763657 KO11_15825 Escherichia coli KO11FL hypothetical protein YP_006165486.1 3350980 R 595495 CDS YP_006165487.1 386701650 12763658 complement(3351594..3352025) 1 NC_017660.1 hypothetical protein 3352025 12763658 KO11_15830 Escherichia coli KO11FL hypothetical protein YP_006165487.1 3351594 R 595495 CDS YP_006165488.1 386701651 12763659 complement(3352049..3353386) 1 NC_017660.1 hypothetical protein 3353386 12763659 KO11_15835 Escherichia coli KO11FL hypothetical protein YP_006165488.1 3352049 R 595495 CDS YP_006165489.1 386701652 12763660 complement(3353386..3354330) 1 NC_017660.1 hypothetical protein 3354330 12763660 KO11_15840 Escherichia coli KO11FL hypothetical protein YP_006165489.1 3353386 R 595495 CDS YP_006165490.1 386701653 12763661 complement(3354317..3354757) 1 NC_017660.1 hypothetical protein 3354757 12763661 KO11_15845 Escherichia coli KO11FL hypothetical protein YP_006165490.1 3354317 R 595495 CDS YP_006165491.1 386701654 12763662 complement(3354754..3355194) 1 NC_017660.1 hypothetical protein 3355194 12763662 KO11_15850 Escherichia coli KO11FL hypothetical protein YP_006165491.1 3354754 R 595495 CDS YP_006165492.1 386701655 12763663 complement(3355194..3355664) 1 NC_017660.1 hypothetical protein 3355664 12763663 KO11_15855 Escherichia coli KO11FL hypothetical protein YP_006165492.1 3355194 R 595495 CDS YP_006165493.1 386701656 12763664 complement(3355722..3356750) 1 NC_017660.1 hypothetical protein 3356750 12763664 KO11_15860 Escherichia coli KO11FL hypothetical protein YP_006165493.1 3355722 R 595495 CDS YP_006165494.1 386701657 12763665 complement(3356765..3357382) 1 NC_017660.1 hypothetical protein 3357382 12763665 KO11_15865 Escherichia coli KO11FL hypothetical protein YP_006165494.1 3356765 R 595495 CDS YP_006165495.1 386701658 12763666 complement(3357375..3358697) 1 NC_017660.1 nudix hydrolase 3358697 12763666 KO11_15870 Escherichia coli KO11FL nudix hydrolase YP_006165495.1 3357375 R 595495 CDS YP_006165496.1 386701659 12763667 complement(3358678..3359511) 1 NC_017660.1 COG0466 ATP-dependent Lon protease, bacterial type; hypothetical protein 3359511 12763667 KO11_15875 Escherichia coli KO11FL hypothetical protein YP_006165496.1 3358678 R 595495 CDS YP_006165497.1 386701660 12763668 complement(3359456..3360892) 1 NC_017660.1 hypothetical protein 3360892 12763668 KO11_15880 Escherichia coli KO11FL hypothetical protein YP_006165497.1 3359456 R 595495 CDS YP_006165498.1 386701661 12763669 complement(3361689..3362240) 1 NC_017660.1 hypothetical protein 3362240 12763669 KO11_15885 Escherichia coli KO11FL hypothetical protein YP_006165498.1 3361689 R 595495 CDS YP_006165499.1 386701662 12763670 complement(3362230..3363321) 1 NC_017660.1 COG3728 Phage terminase, small subunit; hypothetical protein 3363321 12763670 KO11_15895 Escherichia coli KO11FL hypothetical protein YP_006165499.1 3362230 R 595495 CDS YP_006165500.1 386701663 12763671 complement(3363325..3363534) 1 NC_017660.1 hypothetical protein 3363534 12763671 KO11_15900 Escherichia coli KO11FL hypothetical protein YP_006165500.1 3363325 R 595495 CDS YP_006165501.1 386701664 12763672 complement(3363512..3364444) 1 NC_017660.1 hypothetical protein 3364444 12763672 KO11_15905 Escherichia coli KO11FL hypothetical protein YP_006165501.1 3363512 R 595495 CDS YP_006165502.1 386701665 12763673 complement(3364437..3365225) 1 NC_017660.1 COG1475 Predicted transcriptional regulators; putative transcriptional regulator 3365225 12763673 KO11_15910 Escherichia coli KO11FL putative transcriptional regulator YP_006165502.1 3364437 R 595495 CDS YP_006165503.1 386701666 12763674 complement(3365349..3365456) 1 NC_017660.1 hypothetical protein 3365456 12763674 KO11_15915 Escherichia coli KO11FL hypothetical protein YP_006165503.1 3365349 R 595495 CDS YP_006165504.1 386701667 12763675 complement(3365630..3365785) 1 NC_017660.1 hypothetical protein 3365785 12763675 KO11_15920 Escherichia coli KO11FL hypothetical protein YP_006165504.1 3365630 R 595495 CDS YP_006165505.1 386701668 12763676 complement(3365827..3366204) 1 NC_017660.1 putative phage endolysin 3366204 12763676 KO11_15925 Escherichia coli KO11FL putative phage endolysin YP_006165505.1 3365827 R 595495 CDS YP_006165506.1 386701669 12763677 complement(3366207..3366482) 1 NC_017660.1 putative phage holin 3366482 12763677 KO11_15930 Escherichia coli KO11FL putative phage holin YP_006165506.1 3366207 R 595495 CDS YP_006165507.1 386701670 12763678 complement(3366472..3366864) 1 NC_017660.1 putative phage holin 3366864 12763678 KO11_15935 Escherichia coli KO11FL putative phage holin YP_006165507.1 3366472 R 595495 CDS YP_006165508.1 386701671 12763681 complement(3368135..3368671) 1 NC_017660.1 putative antitermination protein 3368671 12763681 KO11_15940 Escherichia coli KO11FL putative antitermination protein YP_006165508.1 3368135 R 595495 CDS YP_006165509.1 386701672 12763682 complement(3368668..3368958) 1 NC_017660.1 putative bacteriophage protein 3368958 12763682 KO11_15945 Escherichia coli KO11FL putative bacteriophage protein YP_006165509.1 3368668 R 595495 CDS YP_006165510.1 386701673 12763683 complement(3368958..3369557) 1 NC_017660.1 hypothetical protein encoded within prophage 3369557 12763683 KO11_15950 Escherichia coli KO11FL hypothetical protein encoded within prophage YP_006165510.1 3368958 R 595495 CDS YP_006165511.1 386701674 12763684 complement(3370026..3370181) 1 NC_017660.1 hypothetical protein 3370181 12763684 KO11_15955 Escherichia coli KO11FL hypothetical protein YP_006165511.1 3370026 R 595495 CDS YP_006165512.1 386701675 12763685 complement(3370812..3371789) 1 NC_017660.1 hypothetical protein 3371789 12763685 KO11_15960 Escherichia coli KO11FL hypothetical protein YP_006165512.1 3370812 R 595495 CDS YP_006165513.1 386701676 12763686 complement(3371786..3372895) 1 NC_017660.1 COG4938 Uncharacterized conserved protein; putative ATP-dependent endonuclease (OLD family protein) 3372895 12763686 KO11_15965 Escherichia coli KO11FL putative ATP-dependent endonuclease (OLD family protein) YP_006165513.1 3371786 R 595495 CDS YP_006165514.1 386701677 12763687 complement(3372888..3374015) 1 NC_017660.1 COG1479 Uncharacterized conserved protein; hypothetical protein 3374015 12763687 KO11_15970 Escherichia coli KO11FL hypothetical protein YP_006165514.1 3372888 R 595495 CDS YP_006165515.1 386701678 12763688 complement(3374199..3374621) 1 NC_017660.1 hypothetical protein 3374621 12763688 KO11_15975 Escherichia coli KO11FL hypothetical protein YP_006165515.1 3374199 R 595495 CDS YP_006165516.1 386701679 12763689 complement(3374637..3375449) 1 NC_017660.1 COG0640 Predicted transcriptional regulators; ydaW; hypothetical protein 3375449 12763689 KO11_15980 Escherichia coli KO11FL hypothetical protein YP_006165516.1 3374637 R 595495 CDS YP_006165517.1 386701680 12763690 complement(3375421..3376167) 1 NC_017660.1 COG1484 DNA replication protein; putative replication protein 3376167 ydaV 12763690 ydaV Escherichia coli KO11FL putative replication protein YP_006165517.1 3375421 R 595495 CDS YP_006165518.1 386701681 12763691 complement(3376174..3377031) 1 NC_017660.1 COG3756 Uncharacterized protein conserved in bacteria; ydaU; hypothetical protein 3377031 12763691 KO11_15990 Escherichia coli KO11FL hypothetical protein YP_006165518.1 3376174 R 595495 CDS YP_006165519.1 386701682 12763692 complement(3377044..3377466) 1 NC_017660.1 putative phage regulatory protein CII 3377466 ydaT 12763692 ydaT Escherichia coli KO11FL putative phage regulatory protein CII YP_006165519.1 3377044 R 595495 CDS YP_006165520.1 386701683 12763693 complement(3377463..3377717) 1 NC_017660.1 putative transcriptional regulator 3377717 12763693 KO11_16000 Escherichia coli KO11FL putative transcriptional regulator YP_006165520.1 3377463 R 595495 CDS YP_006165521.1 386701684 12763694 3377797..3378216 1 NC_017660.1 COG1396 Predicted transcriptional regulators; putative phage repressor protein CI 3378216 12763694 KO11_16005 Escherichia coli KO11FL putative phage repressor protein CI YP_006165521.1 3377797 D 595495 CDS YP_006165522.1 386701685 12763695 3378502..3378636 1 NC_017660.1 hypothetical protein 3378636 12763695 KO11_16010 Escherichia coli KO11FL hypothetical protein YP_006165522.1 3378502 D 595495 CDS YP_006165523.1 386701686 12763696 3378647..3378799 1 NC_017660.1 ydaG; hypothetical protein 3378799 12763696 KO11_16015 Escherichia coli KO11FL hypothetical protein YP_006165523.1 3378647 D 595495 CDS YP_006165524.1 386701687 12763697 complement(3378796..3379005) 1 NC_017660.1 hypothetical protein 3379005 12763697 KO11_16020 Escherichia coli KO11FL hypothetical protein YP_006165524.1 3378796 R 595495 CDS YP_006165525.1 386701688 12763698 3379220..3379441 1 NC_017660.1 FtsZ inhibitor protein 3379441 kilR 12763698 kilR Escherichia coli KO11FL FtsZ inhibitor protein YP_006165525.1 3379220 D 595495 CDS YP_006165526.1 386701689 12763699 3379441..3379611 1 NC_017660.1 ydaE; hypothetical protein 3379611 12763699 KO11_16030 Escherichia coli KO11FL hypothetical protein YP_006165526.1 3379441 D 595495 CDS YP_006165527.1 386701690 12763700 3379686..3379961 1 NC_017660.1 racC; hypothetical protein 3379961 12763700 KO11_16035 Escherichia coli KO11FL hypothetical protein YP_006165527.1 3379686 D 595495 CDS YP_006165528.1 386701691 12763701 3380063..3382663 1 NC_017660.1 exonuclease VIII 3382663 recE 12763701 recE Escherichia coli KO11FL exonuclease VIII YP_006165528.1 3380063 D 595495 CDS YP_006165529.1 386701692 12763702 3382656..3383465 1 NC_017660.1 COG3723 Recombinational DNA repair protein (RecE pathway); recombination and repair protein RecT 3383465 recT 12763702 recT Escherichia coli KO11FL recombination and repair protein RecT YP_006165529.1 3382656 D 595495 CDS YP_006165530.1 386701693 12763703 3383510..3383716 1 NC_017660.1 restriction alleviation and modification protein 3383716 lar 12763703 lar Escherichia coli KO11FL restriction alleviation and modification protein YP_006165530.1 3383510 D 595495 CDS YP_006165531.1 386701694 12763704 3383709..3383918 1 NC_017660.1 ydaC; hypothetical protein 3383918 12763704 KO11_16055 Escherichia coli KO11FL hypothetical protein YP_006165531.1 3383709 D 595495 CDS YP_006165532.1 386701695 12763705 3383997..3384212 1 NC_017660.1 ydaQ; hypothetical protein 3384212 12763705 KO11_16060 Escherichia coli KO11FL hypothetical protein YP_006165532.1 3383997 D 595495 CDS YP_006165533.1 386701696 12763706 3384214..3385449 1 NC_017660.1 COG0582 Integrase; Rac prophage, integrase 3385449 intR 12763706 intR Escherichia coli KO11FL Rac prophage, integrase YP_006165533.1 3384214 D 595495 CDS YP_006165534.1 386701697 12763707 3385501..3386436 1 NC_017660.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA 2-thiocytidine biosynthesis protein TtcA 3386436 ttcA 12763707 ttcA Escherichia coli KO11FL tRNA 2-thiocytidine biosynthesis protein TtcA YP_006165534.1 3385501 D 595495 CDS YP_006165535.1 386701698 12758895 complement(3386565..3387938) 1 NC_017660.1 COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DbpA 3387938 dbpA 12758895 dbpA Escherichia coli KO11FL ATP-dependent RNA helicase DbpA YP_006165535.1 3386565 R 595495 CDS YP_006165536.1 386701699 12758896 complement(3388313..3388450) 1 NC_017660.1 hypothetical protein 3388450 12758896 KO11_16080 Escherichia coli KO11FL hypothetical protein YP_006165536.1 3388313 R 595495 CDS YP_006165537.1 386701700 12758897 complement(3388416..3389399) 1 NC_017660.1 COG0598 Mg2+ and Co2+ transporters; zinc transporter 3389399 zntB 12758897 zntB Escherichia coli KO11FL zinc transporter YP_006165537.1 3388416 R 595495 CDS YP_006165538.1 386701701 12758898 3389654..3390886 1 NC_017660.1 COG2199 FOG: GGDEF domain; putative diguanylate cyclase, GG[D/E]EF domain signaling protein 3390886 ydaM 12758898 ydaM Escherichia coli KO11FL putative diguanylate cyclase, GG[D/E]EF domain signaling protein YP_006165538.1 3389654 D 595495 CDS YP_006165539.1 386701702 12758899 complement(3390907..3391470) 1 NC_017660.1 COG2840 Uncharacterized protein conserved in bacteria; Smr domain protein 3391470 ydaL 12758899 ydaL Escherichia coli KO11FL Smr domain protein YP_006165539.1 3390907 R 595495 CDS YP_006165540.1 386701703 12758900 complement(3391800..3392708) 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 3392708 abgR 12758900 abgR Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006165540.1 3391800 R 595495 CDS YP_006165541.1 386701704 12758901 3392884..3394194 1 NC_017660.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; putative peptidase, aminobenzoyl-glutamate utilization protein AbgA 3394194 abgA 12758901 abgA Escherichia coli KO11FL putative peptidase, aminobenzoyl-glutamate utilization protein AbgA YP_006165541.1 3392884 D 595495 CDS YP_006165542.1 386701705 12758902 3394194..3395639 1 NC_017660.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; putative peptidase, aminobenzoyl-glutamate utilization protein 3395639 abgB 12758902 abgB Escherichia coli KO11FL putative peptidase, aminobenzoyl-glutamate utilization protein YP_006165542.1 3394194 D 595495 CDS YP_006165543.1 386701706 12758903 3395676..3397202 1 NC_017660.1 COG2978 Putative p-aminobenzoyl-glutamate transporter; putative aminobenzoyl-glutamate transporter 3397202 abgT 12758903 abgT Escherichia coli KO11FL putative aminobenzoyl-glutamate transporter YP_006165543.1 3395676 D 595495 CDS YP_006165544.1 386701707 12758904 3397213..3397728 1 NC_017660.1 COG0350 Methylated DNA-protein cysteine methyltransferase; O-6-alkylguanine-DNA:cysteine-protein methyltransferase 3397728 ogt 12758904 ogt Escherichia coli KO11FL O-6-alkylguanine-DNA:cysteine-protein methyltransferase YP_006165544.1 3397213 D 595495 CDS YP_006165545.1 386701708 12758905 3397923..3398675 1 NC_017660.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; fumarate/nitrate reduction transcriptional regulator 3398675 fnr 12758905 fnr Escherichia coli KO11FL fumarate/nitrate reduction transcriptional regulator YP_006165545.1 3397923 D 595495 CDS YP_006165546.1 386701709 12758906 3398827..3399777 1 NC_017660.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspE 3399777 uspE 12758906 uspE Escherichia coli KO11FL universal stress protein UspE YP_006165546.1 3398827 D 595495 CDS YP_006165547.1 386701710 12758907 complement(3399827..3400084) 1 NC_017660.1 ynaJ; hypothetical protein 3400084 12758907 KO11_16135 Escherichia coli KO11FL hypothetical protein YP_006165547.1 3399827 R 595495 CDS YP_006165548.1 386701711 12758908 complement(3400407..3401615) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3401615 12758908 KO11_16140 Escherichia coli KO11FL IS10 transposase YP_006165548.1 3400407 R 595495 CDS YP_006165549.1 386701712 12758909 3401741..3402697 1 NC_017660.1 COG0668 Small-conductance mechanosensitive channel; fragmented by IS10 insertion; MscS family inner membrane protein YnaI 3402697 ynaI 12758909 ynaI Escherichia coli KO11FL MscS family inner membrane protein YnaI YP_006165549.1 3401741 D 595495 CDS YP_006165550.1 386701713 12758910 complement(3402748..3404361) 1 NC_017660.1 COG4166 ABC-type oligopeptide transport system, periplasmic component; murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit 3404361 mppA 12758910 mppA Escherichia coli KO11FL murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit YP_006165550.1 3402748 R 595495 CDS YP_006165551.1 386701714 12758911 complement(3404484..3404609) 1 NC_017660.1 hypothetical protein 3404609 12758911 KO11_16155 Escherichia coli KO11FL hypothetical protein YP_006165551.1 3404484 R 595495 CDS YP_006165552.1 386701715 12758912 complement(3404698..3405597) 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 3405597 ycjZ 12758912 ycjZ Escherichia coli KO11FL LysR family transcriptional regulator YP_006165552.1 3404698 R 595495 CDS YP_006165553.1 386701716 12758913 3405738..3406655 1 NC_017660.1 COG1073 Hydrolases of the alpha/beta superfamily; putative hydrolase 3406655 ycjY 12758913 ycjY Escherichia coli KO11FL putative hydrolase YP_006165553.1 3405738 D 595495 CDS YP_006165554.1 386701717 12758914 3406820..3407587 1 NC_017660.1 COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein 3407587 12758914 KO11_16170 Escherichia coli KO11FL hypothetical protein YP_006165554.1 3406820 D 595495 CDS YP_006165555.1 386701718 12758915 3407605..3408243 1 NC_017660.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases; putative NAD(P) binding enzyme 3408243 12758915 KO11_16175 Escherichia coli KO11FL putative NAD(P) binding enzyme YP_006165555.1 3407605 D 595495 CDS YP_006165556.1 386701719 12758916 3408534..3409262 1 NC_017660.1 COG2866 Predicted carboxypeptidase; murein peptide amidase A 3409262 mpaA 12758916 mpaA Escherichia coli KO11FL murein peptide amidase A YP_006165556.1 3408534 D 595495 CDS YP_006165557.1 386701720 12758917 complement(3409237..3410202) 1 NC_017660.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; L-Ala-D/L-Glu epimerase 3410202 ycjG 12758917 ycjG Escherichia coli KO11FL L-Ala-D/L-Glu epimerase YP_006165557.1 3409237 R 595495 CDS YP_006165558.1 386701721 12758918 3410321..3410827 1 NC_017660.1 COG2077 Peroxiredoxin; lipid hydroperoxide peroxidase 3410827 tpx 12758918 tpx Escherichia coli KO11FL lipid hydroperoxide peroxidase YP_006165558.1 3410321 D 595495 CDS YP_006165559.1 386701722 12758919 complement(3410871..3412412) 1 NC_017660.1 COG3283 Transcriptional regulator of aromatic amino acids metabolism; DNA-binding transcriptional regulator TyrR 3412412 tyrR 12758919 tyrR Escherichia coli KO11FL DNA-binding transcriptional regulator TyrR YP_006165559.1 3410871 R 595495 CDS YP_006165560.1 386701723 12758920 complement(3412560..3413621) 1 NC_017660.1 COG3768 Predicted membrane protein; ycjF; hypothetical protein 3413621 12758920 KO11_16200 Escherichia coli KO11FL hypothetical protein YP_006165560.1 3412560 R 595495 CDS YP_006165561.1 386701724 12758921 complement(3413618..3415015) 1 NC_017660.1 COG3106 Predicted ATPase; ycjX; hypothetical protein 3415015 12758921 KO11_16205 Escherichia coli KO11FL hypothetical protein YP_006165561.1 3413618 R 595495 CDS YP_006165562.1 386701725 12758922 3415170..3416168 1 NC_017660.1 COG1609 Transcriptional regulators; putative DNA-binding transcriptional regulator, LACI-type 3416168 ycjW 12758922 ycjW Escherichia coli KO11FL putative DNA-binding transcriptional regulator, LACI-type YP_006165562.1 3415170 D 595495 CDS YP_006165563.1 386701726 12758923 complement(3416279..3417184) 1 NC_017660.1 outer membrane porin 3417184 ompG 12758923 ompG Escherichia coli KO11FL outer membrane porin YP_006165563.1 3416279 R 595495 CDS YP_006165564.1 386701727 12758924 complement(3417229..3418311) 1 NC_017660.1 COG3839 ABC-type sugar transport systems, ATPase components; putative sugar transporter subunit 3418311 ycjV 12758924 ycjV Escherichia coli KO11FL putative sugar transporter subunit YP_006165564.1 3417229 R 595495 CDS YP_006165565.1 386701728 12758925 complement(3418325..3418984) 1 NC_017660.1 COG0637 Predicted phosphatase/phosphohexomutase; putative beta-phosphoglucomutase 3418984 ycjU 12758925 ycjU Escherichia coli KO11FL putative beta-phosphoglucomutase YP_006165565.1 3418325 R 595495 CDS YP_006165566.1 386701729 12758926 complement(3418981..3421248) 1 NC_017660.1 COG1554 Trehalose and maltose hydrolases (possible phosphorylases); putative hydrolase 3421248 ycjT 12758926 ycjT Escherichia coli KO11FL putative hydrolase YP_006165566.1 3418981 R 595495 CDS YP_006165567.1 386701730 12758927 complement(3421245..3422288) 1 NC_017660.1 COG0673 Predicted dehydrogenases and related proteins; putative oxidoreductase, NADH-binding protein 3422288 ycjS 12758927 ycjS Escherichia coli KO11FL putative oxidoreductase, NADH-binding protein YP_006165567.1 3421245 R 595495 CDS YP_006165568.1 386701731 12758928 complement(3422310..3423098) 1 NC_017660.1 COG1082 Sugar phosphate isomerases/epimerases; ycjR; hypothetical protein 3423098 12758928 KO11_16240 Escherichia coli KO11FL hypothetical protein YP_006165568.1 3422310 R 595495 CDS YP_006165569.1 386701732 12758929 complement(3423116..3424168) 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein 3424168 ycjQ 12758929 ycjQ Escherichia coli KO11FL putative oxidoreductase, Zn-dependent and NAD(P)-binding protein YP_006165569.1 3423116 R 595495 CDS YP_006165570.1 386701733 12758930 complement(3424199..3425041) 1 NC_017660.1 COG0395 ABC-type sugar transport system, permease component; putative sugar transporter subunit 3425041 ycjP 12758930 ycjP Escherichia coli KO11FL putative sugar transporter subunit YP_006165570.1 3424199 R 595495 CDS YP_006165571.1 386701734 12758931 complement(3425028..3425909) 1 NC_017660.1 COG1175 ABC-type sugar transport systems, permease components; putative sugar transporter subunit 3425909 ycjO 12758931 ycjO Escherichia coli KO11FL putative sugar transporter subunit YP_006165571.1 3425028 R 595495 CDS YP_006165572.1 386701735 12758932 complement(3425930..3427222) 1 NC_017660.1 COG1653 ABC-type sugar transport system, periplasmic component; putative sugar transporter subunit 3427222 ycjN 12758932 ycjN Escherichia coli KO11FL putative sugar transporter subunit YP_006165572.1 3425930 R 595495 CDS YP_006165573.1 386701736 12758933 complement(3427236..3428915) 1 NC_017660.1 COG0366 Glycosidases; putative glucosyltransferase 3428915 ycjM 12758933 ycjM Escherichia coli KO11FL putative glucosyltransferase YP_006165573.1 3427236 R 595495 CDS YP_006165574.1 386701737 12758934 complement(3429128..3429442) 1 NC_017660.1 COG0607 Rhodanese-related sulfurtransferase; thiosulfate:cyanide sulfurtransferase 3429442 pspE 12758934 pspE Escherichia coli KO11FL thiosulfate:cyanide sulfurtransferase YP_006165574.1 3429128 R 595495 CDS YP_006165575.1 386701738 12758935 complement(3429517..3429738) 1 NC_017660.1 peripheral inner membrane phage-shock protein 3429738 pspD 12758935 pspD Escherichia coli KO11FL peripheral inner membrane phage-shock protein YP_006165575.1 3429517 R 595495 CDS YP_006165576.1 386701739 12758936 complement(3429747..3430106) 1 NC_017660.1 COG1983 Putative stress-responsive transcriptional regulator; DNA-binding transcriptional activator PspC 3430106 pspC 12758936 pspC Escherichia coli KO11FL DNA-binding transcriptional activator PspC YP_006165576.1 3429747 R 595495 CDS YP_006165577.1 386701740 12758937 complement(3430106..3430330) 1 NC_017660.1 phage shock protein B 3430330 pspB 12758937 pspB Escherichia coli KO11FL phage shock protein B YP_006165577.1 3430106 R 595495 CDS YP_006165578.1 386701741 12758938 complement(3430384..3431052) 1 NC_017660.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription; phage shock protein PspA 3431052 pspA 12758938 pspA Escherichia coli KO11FL phage shock protein PspA YP_006165578.1 3430384 R 595495 CDS YP_006165579.1 386701742 12758939 3431219..3432196 1 NC_017660.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; phage shock protein operon transcriptional activator 3432196 pspF 12758939 pspF Escherichia coli KO11FL phage shock protein operon transcriptional activator YP_006165579.1 3431219 D 595495 CDS YP_006165580.1 386701743 12758940 complement(3432316..3433581) 1 NC_017660.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases; 4-aminobutyrate transaminase 3433581 puuE 12758940 puuE Escherichia coli KO11FL 4-aminobutyrate transaminase YP_006165580.1 3432316 R 595495 CDS YP_006165581.1 386701744 12758941 complement(3433619..3434899) 1 NC_017660.1 COG0665 Glycine/D-amino acid oxidases (deaminating); gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding protein 3434899 puuD 12758941 puuD Escherichia coli KO11FL gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding protein YP_006165581.1 3433619 R 595495 CDS YP_006165582.1 386701745 12758942 complement(3434901..3436388) 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase 3436388 puuC 12758942 puuC Escherichia coli KO11FL gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase YP_006165582.1 3434901 R 595495 CDS YP_006165583.1 386701746 12758943 complement(3436663..3437220) 1 NC_017660.1 COG1396 Predicted transcriptional regulators; DNA-binding transcriptional repressor PuuR 3437220 puuR 12758943 puuR Escherichia coli KO11FL DNA-binding transcriptional repressor PuuR YP_006165583.1 3436663 R 595495 CDS YP_006165584.1 386701747 12758944 complement(3437247..3437999) 1 NC_017660.1 COG2071 Predicted glutamine amidotransferases; gamma-glutamyl-gamma-aminobutyrate hydrolase 3437999 puuB 12758944 puuB Escherichia coli KO11FL gamma-glutamyl-gamma-aminobutyrate hydrolase YP_006165584.1 3437247 R 595495 CDS YP_006165585.1 386701748 12758945 3438223..3439641 1 NC_017660.1 COG0174 Glutamine synthetase; gamma-glutamylputrescine synthetase 3439641 puuA 12758945 puuA Escherichia coli KO11FL gamma-glutamylputrescine synthetase YP_006165585.1 3438223 D 595495 CDS YP_006165586.1 386701749 12758946 3439944..3441329 1 NC_017660.1 COG0531 Amino acid transporters; putrescine importer 3441329 puuP 12758946 puuP Escherichia coli KO11FL putrescine importer YP_006165586.1 3439944 D 595495 CDS YP_006165587.1 386701750 12758947 3441463..3441708 1 NC_017660.1 ymjA; hypothetical protein 3441708 12758947 KO11_16335 Escherichia coli KO11FL hypothetical protein YP_006165587.1 3441463 D 595495 CDS YP_006165588.1 386701751 12758948 3442021..3443664 1 NC_017660.1 COG4166 ABC-type oligopeptide transport system, periplasmic component; antimicrobial peptide ABC transporter substrate-binding protein SapA 3443664 sapA 12758948 sapA Escherichia coli KO11FL antimicrobial peptide ABC transporter substrate-binding protein SapA YP_006165588.1 3442021 D 595495 CDS YP_006165589.1 386701752 12758949 3443661..3444626 1 NC_017660.1 COG4168 ABC-type antimicrobial peptide transport system, permease component; antimicrobial peptide ABC transporter permease SapB 3444626 sapB 12758949 sapB Escherichia coli KO11FL antimicrobial peptide ABC transporter permease SapB YP_006165589.1 3443661 D 595495 CDS YP_006165590.1 386701753 12758950 3444613..3445503 1 NC_017660.1 COG4171 ABC-type antimicrobial peptide transport system, permease component; antimicrobial peptide ABC transporter permease SapC 3445503 sapC 12758950 sapC Escherichia coli KO11FL antimicrobial peptide ABC transporter permease SapC YP_006165590.1 3444613 D 595495 CDS YP_006165591.1 386701754 12758951 3445503..3446495 1 NC_017660.1 COG4170 ABC-type antimicrobial peptide transport system, ATPase component; antimicrobial peptide ABC transporter ATP-binding protein 3446495 sapD 12758951 sapD Escherichia coli KO11FL antimicrobial peptide ABC transporter ATP-binding protein YP_006165591.1 3445503 D 595495 CDS YP_006165592.1 386701755 12758952 3446497..3447303 1 NC_017660.1 COG4167 ABC-type antimicrobial peptide transport system, ATPase component; antimicrobial peptide ABC system ATP-binding protein SapF 3447303 sapF 12758952 sapF Escherichia coli KO11FL antimicrobial peptide ABC system ATP-binding protein SapF YP_006165592.1 3446497 D 595495 CDS YP_006165593.1 386701756 12758953 3447374..3447724 1 NC_017660.1 COG2852 Uncharacterized protein conserved in bacteria; ycjD; hypothetical protein 3447724 12758953 KO11_16365 Escherichia coli KO11FL hypothetical protein YP_006165593.1 3447374 D 595495 CDS YP_006165594.1 386701757 12758954 3448094..3448882 1 NC_017660.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase 3448882 fabI 12758954 fabI Escherichia coli KO11FL enoyl-ACP reductase YP_006165594.1 3448094 D 595495 CDS YP_006165595.1 386701758 12758955 3449027..3450154 1 NC_017660.1 COG2128 Uncharacterized conserved protein; putative oxidoreductase 3450154 yciW 12758955 yciW Escherichia coli KO11FL putative oxidoreductase YP_006165595.1 3449027 D 595495 CDS YP_006165596.1 386701759 12758956 3450222..3452156 1 NC_017660.1 COG4776 Exoribonuclease II; exoribonuclease II 3452156 rnb 12758956 rnb Escherichia coli KO11FL exoribonuclease II YP_006165596.1 3450222 D 595495 CDS YP_006165597.1 386701760 12758957 complement(3452193..3452339) 1 NC_017660.1 hypothetical protein 3452339 12758957 KO11_16385 Escherichia coli KO11FL hypothetical protein YP_006165597.1 3452193 R 595495 CDS YP_006165598.1 386701761 12758958 3452393..3454378 1 NC_017660.1 COG2199 FOG: GGDEF domain; RNase II stability modulator 3454378 gmr 12758958 gmr Escherichia coli KO11FL RNase II stability modulator YP_006165598.1 3452393 D 595495 CDS YP_006165599.1 386701762 12758959 3454525..3454698 1 NC_017660.1 yciZ; hypothetical protein 3454698 12758959 KO11_16395 Escherichia coli KO11FL hypothetical protein YP_006165599.1 3454525 D 595495 CDS YP_006165600.1 386701763 12758960 3454788..3455537 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; putative DEOR-type transcriptional regulator 3455537 yciT 12758960 yciT Escherichia coli KO11FL putative DEOR-type transcriptional regulator YP_006165600.1 3454788 D 595495 CDS YP_006165601.1 386701764 12758961 3455806..3456024 1 NC_017660.1 lipoprotein 3456024 12758961 KO11_16405 Escherichia coli KO11FL lipoprotein YP_006165601.1 3455806 D 595495 CDS YP_006165602.1 386701765 12758962 complement(3456150..3456476) 1 NC_017660.1 COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins; translation initiation factor Sui1 3456476 osmB 12758962 osmB Escherichia coli KO11FL translation initiation factor Sui1 YP_006165602.1 3456150 R 595495 CDS YP_006165603.1 386701766 12758963 complement(3456476..3457273) 1 NC_017660.1 COG0284 Orotidine-5-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 3457273 pyrF 12758963 pyrF Escherichia coli KO11FL orotidine 5'-phosphate decarboxylase YP_006165603.1 3456476 R 595495 CDS YP_006165604.1 386701767 12758964 complement(3457406..3458575) 1 NC_017660.1 COG2956 Predicted N-acetylglucosaminyl transferase; hypothetical protein 3458575 yciM 12758964 yciM Escherichia coli KO11FL hypothetical protein YP_006165604.1 3457406 R 595495 CDS YP_006165605.1 386701768 12758965 complement(3458582..3458890) 1 NC_017660.1 COG3771 Predicted membrane protein; hypothetical protein 3458890 yciS 12758965 yciS Escherichia coli KO11FL hypothetical protein YP_006165605.1 3458582 R 595495 CDS YP_006165606.1 386701769 12758966 complement(3459039..3459803) 1 NC_017660.1 COG0671 Membrane-associated phospholipid phosphatase; phosphatidylglycerophosphatase B 3459803 pgpB 12758966 pgpB Escherichia coli KO11FL phosphatidylglycerophosphatase B YP_006165606.1 3459039 R 595495 CDS YP_006165607.1 386701770 12758967 3459973..3460563 1 NC_017660.1 COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II 3460563 ribA 12758967 ribA Escherichia coli KO11FL GTP cyclohydrolase II YP_006165607.1 3459973 D 595495 CDS YP_006165608.1 386701771 12758968 complement(3460627..3463302) 1 NC_017660.1 COG1048 Aconitase A; aconitate hydratase 3463302 acnA 12758968 acnA Escherichia coli KO11FL aconitate hydratase YP_006165608.1 3460627 R 595495 CDS YP_006165609.1 386701772 12758969 3463476..3463601 1 NC_017660.1 hypothetical protein 3463601 12758969 KO11_16445 Escherichia coli KO11FL hypothetical protein YP_006165609.1 3463476 D 595495 CDS YP_006165610.1 386701773 12758970 complement(3463675..3463842) 1 NC_017660.1 yciX; hypothetical protein 3463842 12758970 KO11_16450 Escherichia coli KO11FL hypothetical protein YP_006165610.1 3463675 R 595495 CDS YP_006165611.1 386701774 12758971 complement(3463845..3463973) 1 NC_017660.1 ymiA; hypothetical protein 3463973 12758971 KO11_16455 Escherichia coli KO11FL hypothetical protein YP_006165611.1 3463845 R 595495 CDS YP_006165612.1 386701775 12758972 complement(3464304..3465278) 1 NC_017660.1 COG0583 Transcriptional regulator; transcriptional regulator CysB 3465278 cysB 12758972 cysB Escherichia coli KO11FL transcriptional regulator CysB YP_006165612.1 3464304 R 595495 CDS YP_006165613.1 386701776 12758973 complement(3465488..3468085) 1 NC_017660.1 COG0550 Topoisomerase IA; DNA topoisomerase I subunit omega 3468085 topA 12758973 topA Escherichia coli KO11FL DNA topoisomerase I subunit omega YP_006165613.1 3465488 R 595495 CDS YP_006165614.1 386701777 12758974 3468465..3468716 1 NC_017660.1 yciN; hypothetical protein 3468716 12758974 KO11_16470 Escherichia coli KO11FL hypothetical protein YP_006165614.1 3468465 D 595495 CDS YP_006165615.1 386701778 12758975 complement(3468752..3469801) 1 NC_017660.1 COG0616 Periplasmic serine proteases (ClpP class); putative inner membrane peptidase 3469801 sohB 12758975 sohB Escherichia coli KO11FL putative inner membrane peptidase YP_006165615.1 3468752 R 595495 CDS YP_006165616.1 386701779 12758976 3470021..3470779 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); putative oxoacyl-(acyl carrier protein) reductase 3470779 yciK 12758976 yciK Escherichia coli KO11FL putative oxoacyl-(acyl carrier protein) reductase YP_006165616.1 3470021 D 595495 CDS YP_006165617.1 386701780 12758977 3470776..3471366 1 NC_017660.1 COG2109 ATP:corrinoid adenosyltransferase; cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 3471366 btuR 12758977 btuR Escherichia coli KO11FL cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase YP_006165617.1 3470776 D 595495 CDS YP_006165618.1 386701781 12758978 complement(3471406..3472278) 1 NC_017660.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridylate synthase B 3472278 rluB 12758978 rluB Escherichia coli KO11FL 23S rRNA pseudouridylate synthase B YP_006165618.1 3471406 R 595495 CDS YP_006165619.1 386701782 12758979 complement(3472379..3472999) 1 NC_017660.1 COG0009 Putative translation factor (SUA5); yciO; hypothetical protein 3472999 12758979 KO11_16495 Escherichia coli KO11FL hypothetical protein YP_006165619.1 3472379 R 595495 CDS YP_006165620.1 386701783 12758980 complement(3472996..3473877) 1 NC_017660.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family); yciV; hypothetical protein 3473877 12758980 KO11_16500 Escherichia coli KO11FL hypothetical protein YP_006165620.1 3472996 R 595495 CDS YP_006165622.1 386701785 12758982 3474151..3475713 1 NC_017660.1 COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I 3475713 trpE 12758982 trpE Escherichia coli KO11FL anthranilate synthase component I YP_006165622.1 3474151 D 595495 CDS YP_006165623.1 386701786 12758983 3475713..3477308 1 NC_017660.1 COG0512 Anthranilate/para-aminobenzoate synthases component II; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase 3477308 trpD 12758983 trpD Escherichia coli KO11FL bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase YP_006165623.1 3475713 D 595495 CDS YP_006165624.1 386701787 12758984 3477309..3478670 1 NC_017660.1 COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 3478670 trpC 12758984 trpC Escherichia coli KO11FL bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_006165624.1 3477309 D 595495 CDS YP_006165625.1 386701788 12758985 3478682..3479875 1 NC_017660.1 COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta 3479875 trpB 12758985 trpB Escherichia coli KO11FL tryptophan synthase subunit beta YP_006165625.1 3478682 D 595495 CDS YP_006165626.1 386701789 12758986 3479875..3480681 1 NC_017660.1 COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha 3480681 trpA 12758986 trpA Escherichia coli KO11FL tryptophan synthase subunit alpha YP_006165626.1 3479875 D 595495 CDS YP_006165627.1 386701790 12758987 3481062..3481241 1 NC_017660.1 COG3729 General stress protein; yciG; hypothetical protein 3481241 12758987 KO11_16530 Escherichia coli KO11FL hypothetical protein YP_006165627.1 3481062 D 595495 CDS YP_006165628.1 386701791 12758988 3481327..3481827 1 NC_017660.1 COG3685 Uncharacterized protein conserved in bacteria; yciF; hypothetical protein 3481827 12758988 KO11_16535 Escherichia coli KO11FL hypothetical protein YP_006165628.1 3481327 D 595495 CDS YP_006165629.1 386701792 12758989 3481873..3482379 1 NC_017660.1 COG3685 Uncharacterized protein conserved in bacteria; yciE; hypothetical protein 3482379 12758989 KO11_16540 Escherichia coli KO11FL hypothetical protein YP_006165629.1 3481873 D 595495 CDS YP_006165630.1 386701793 12758990 complement(3482439..3483077) 1 NC_017660.1 COG3047 Outer membrane protein W; outer membrane protein W 3483077 ompW 12758990 ompW Escherichia coli KO11FL outer membrane protein W YP_006165630.1 3482439 R 595495 CDS YP_006165631.1 386701794 12758991 3483434..3484177 1 NC_017660.1 yciC; hypothetical protein 3484177 12758991 KO11_16550 Escherichia coli KO11FL hypothetical protein YP_006165631.1 3483434 D 595495 CDS YP_006165632.1 386701795 12758992 3484207..3484746 1 NC_017660.1 COG2917 Intracellular septation protein A; intracellular septation protein A 3484746 yciB 12758992 yciB Escherichia coli KO11FL intracellular septation protein A YP_006165632.1 3484207 D 595495 CDS YP_006165633.1 386701796 12758993 3484851..3485249 1 NC_017660.1 COG1607 Acyl-CoA hydrolase; acyl-CoA esterase 3485249 yciA 12758993 yciA Escherichia coli KO11FL acyl-CoA esterase YP_006165633.1 3484851 D 595495 CDS YP_006165634.1 386701797 12758994 complement(3485289..3486008) 1 NC_017660.1 COG0810 Periplasmic protein TonB, links inner and outer membranes; transporter 3486008 tonB 12758994 tonB Escherichia coli KO11FL transporter YP_006165634.1 3485289 R 595495 CDS YP_006165635.1 386701798 12758995 3486232..3486528 1 NC_017660.1 COG2350 Uncharacterized protein conserved in bacteria; YciI-like protein 3486528 yciI 12758995 yciI Escherichia coli KO11FL YciI-like protein YP_006165635.1 3486232 D 595495 CDS YP_006165636.1 386701799 12758996 3486828..3488081 1 NC_017660.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component; voltage-gated potassium channel 3488081 kch 12758996 kch Escherichia coli KO11FL voltage-gated potassium channel YP_006165636.1 3486828 D 595495 CDS YP_006165637.1 386701800 12758997 3488452..3489912 1 NC_017660.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; cardiolipin synthetase 3489912 cls 12758997 cls Escherichia coli KO11FL cardiolipin synthetase YP_006165637.1 3488452 D 595495 CDS YP_006165638.1 386701801 12758998 3489947..3490276 1 NC_017660.1 COG3099 Uncharacterized protein conserved in bacteria; dsDNA-mimic protein 3490276 yciU 12758998 yciU Escherichia coli KO11FL dsDNA-mimic protein YP_006165638.1 3489947 D 595495 CDS YP_006165639.1 386701802 12758999 complement(3490329..3491333) 1 NC_017660.1 COG4608 ABC-type oligopeptide transport system, ATPase component; oligopeptide ABC transporter ATP-binding protein OppF 3491333 oppF 12758999 oppF Escherichia coli KO11FL oligopeptide ABC transporter ATP-binding protein OppF YP_006165639.1 3490329 R 595495 CDS YP_006165640.1 386701803 12759000 complement(3491330..3492343) 1 NC_017660.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide ABC transporter ATP-binding protein 3492343 oppD 12759000 oppD Escherichia coli KO11FL oligopeptide ABC transporter ATP-binding protein YP_006165640.1 3491330 R 595495 CDS YP_006165641.1 386701804 12759001 complement(3492355..3493263) 1 NC_017660.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide ABC transporter permease OppC 3493263 oppC 12759001 oppC Escherichia coli KO11FL oligopeptide ABC transporter permease OppC YP_006165641.1 3492355 R 595495 CDS YP_006165642.1 386701805 12759002 complement(3493278..3494198) 1 NC_017660.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide transporter permease 3494198 oppB 12759002 oppB Escherichia coli KO11FL oligopeptide transporter permease YP_006165642.1 3493278 R 595495 CDS YP_006165643.1 386701806 12759003 complement(3494284..3495960) 1 NC_017660.1 COG4166 ABC-type oligopeptide transport system, periplasmic component; oligopeptide ABC transporter substrate-binding protein OppA 3495960 oppA 12759003 oppA Escherichia coli KO11FL oligopeptide ABC transporter substrate-binding protein OppA YP_006165643.1 3494284 R 595495 CDS YP_006165644.1 386701807 12759004 complement(3496653..3497300) 1 NC_017660.1 COG2095 Multiple antibiotic transporter; ychE; hypothetical protein 3497300 12759004 KO11_16615 Escherichia coli KO11FL hypothetical protein YP_006165644.1 3496653 R 595495 CDS YP_006165645.1 386701808 12759005 3497777..3500452 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 3500452 adhE 12759005 adhE Escherichia coli KO11FL bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_006165645.1 3497777 D 595495 CDS YP_006165646.1 386701809 12759006 complement(3500754..3501371) 1 NC_017660.1 COG1435 Thymidine kinase; thymidine kinase 3501371 tdk 12759006 tdk Escherichia coli KO11FL thymidine kinase YP_006165646.1 3500754 R 595495 CDS YP_006165647.1 386701810 12759007 3501976..3502389 1 NC_017660.1 COG2916 DNA-binding protein H-NS; global DNA-binding transcriptional dual regulator H-NS 3502389 hns 12759007 hns Escherichia coli KO11FL global DNA-binding transcriptional dual regulator H-NS YP_006165647.1 3501976 D 595495 CDS YP_006165648.1 386701811 12759008 complement(3502533..3503441) 1 NC_017660.1 COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 3503441 galU 12759008 galU Escherichia coli KO11FL UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_006165648.1 3502533 R 595495 CDS YP_006165649.1 386701812 12759009 complement(3503643..3504656) 1 NC_017660.1 COG0784 FOG: CheY-like receiver; response regulator of RpoS 3504656 rssB 12759009 rssB Escherichia coli KO11FL response regulator of RpoS YP_006165649.1 3503643 R 595495 CDS YP_006165650.1 386701813 12759010 complement(3504748..3505653) 1 NC_017660.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; rssA; hypothetical protein 3505653 12759010 KO11_16645 Escherichia coli KO11FL hypothetical protein YP_006165650.1 3504748 R 595495 CDS YP_006165651.1 386701814 12759011 3505865..3506224 1 NC_017660.1 COG3012 Uncharacterized protein conserved in bacteria; ychJ; hypothetical protein 3506224 12759011 KO11_16650 Escherichia coli KO11FL hypothetical protein YP_006165651.1 3505865 D 595495 CDS YP_006165652.1 386701815 12759012 3506274..3507116 1 NC_017660.1 COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase 3507116 purU 12759012 purU Escherichia coli KO11FL formyltetrahydrofolate deformylase YP_006165652.1 3506274 D 595495 CDS YP_006165653.1 386701816 12759015 complement(3507480..3507659) 1 NC_017660.1 hypothetical protein 3507659 12759015 KO11_16660 Escherichia coli KO11FL hypothetical protein YP_006165653.1 3507480 R 595495 CDS YP_006165654.1 386701817 12759016 complement(3507842..3508519) 1 NC_017660.1 COG2181 Nitrate reductase gamma subunit; Respiratory nitrate reductase subunit gamma 3508519 narI 12759016 narI Escherichia coli KO11FL Respiratory nitrate reductase subunit gamma YP_006165654.1 3507842 R 595495 CDS YP_006165655.1 386701818 12759017 complement(3508519..3509229) 1 NC_017660.1 COG2180 Nitrate reductase delta subunit; molybdenum-cofactor-assembly chaperone subunit delta 3509229 narJ 12759017 narJ Escherichia coli KO11FL molybdenum-cofactor-assembly chaperone subunit delta YP_006165655.1 3508519 R 595495 CDS YP_006165656.1 386701819 12759018 complement(3509226..3510764) 1 NC_017660.1 COG1140 Nitrate reductase beta subunit; Nitrate reductase, beta subunit 3510764 narH 12759018 narH Escherichia coli KO11FL Nitrate reductase, beta subunit YP_006165656.1 3509226 R 595495 CDS YP_006165657.1 386701820 12759019 complement(3510761..3514504) 1 NC_017660.1 COG5013 Nitrate reductase alpha subunit; nitrate reductase 1 subunit alpha 3514504 narG 12759019 narG Escherichia coli KO11FL nitrate reductase 1 subunit alpha YP_006165657.1 3510761 R 595495 CDS YP_006165658.1 386701821 12759020 complement(3515020..3516411) 1 NC_017660.1 COG2223 Nitrate/nitrite transporter; nitrite extrusion protein 3516411 narK 12759020 narK Escherichia coli KO11FL nitrite extrusion protein YP_006165658.1 3515020 R 595495 CDS YP_006165659.1 386701822 12759021 3516750..3518546 1 NC_017660.1 COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; nitrate/nitrite sensor protein NarX 3518546 narX 12759021 narX Escherichia coli KO11FL nitrate/nitrite sensor protein NarX YP_006165659.1 3516750 D 595495 CDS YP_006165660.1 386701823 12759022 3518539..3519189 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; nitrate/nitrite sensor protein NarX 3519189 narL 12759022 narL Escherichia coli KO11FL nitrate/nitrite sensor protein NarX YP_006165660.1 3518539 D 595495 CDS YP_006165661.1 386701824 12759023 complement(3519190..3520584) 1 NC_017660.1 putative invasin 3520584 ychO 12759023 ychO Escherichia coli KO11FL putative invasin YP_006165661.1 3519190 R 595495 CDS YP_006165662.1 386701825 12759024 3520769..3521122 1 NC_017660.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction; ychN; hypothetical protein 3521122 12759024 KO11_16710 Escherichia coli KO11FL hypothetical protein YP_006165662.1 3520769 D 595495 CDS YP_006165663.1 386701826 12759025 complement(3521162..3521839) 1 NC_017660.1 COG3703 Uncharacterized protein involved in cation transport; regulatory protein for cation transport 3521839 chaC 12759025 chaC Escherichia coli KO11FL regulatory protein for cation transport YP_006165663.1 3521162 R 595495 CDS YP_006165664.1 386701827 12759026 complement(3522018..3522248) 1 NC_017660.1 COG4572 Putative cation transport regulator; cation transport regulator 3522248 chaB 12759026 chaB Escherichia coli KO11FL cation transport regulator YP_006165664.1 3522018 R 595495 CDS YP_006165665.1 386701828 12759027 3522675..3523883 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3523883 12759027 KO11_16725 Escherichia coli KO11FL IS10 transposase YP_006165665.1 3522675 D 595495 CDS YP_006165666.1 386701829 12759028 3523880..3524956 1 NC_017660.1 COG0387 Ca2+/H+ antiporter; fragmented by IS10 insertion; calcium/sodium:proton antiporter 3524956 chaA 12759028 chaA Escherichia coli KO11FL calcium/sodium:proton antiporter YP_006165666.1 3523880 D 595495 CDS YP_006165667.1 386701830 12759029 3525334..3525468 1 NC_017660.1 small toxic polypeptide 3525468 ldrC 12759029 ldrC Escherichia coli KO11FL small toxic polypeptide YP_006165667.1 3525334 D 595495 CDS YP_006165668.1 386701831 12759030 3525897..3526004 1 NC_017660.1 small toxic polypeptide 3526004 ldrB 12759030 ldrB Escherichia coli KO11FL small toxic polypeptide YP_006165668.1 3525897 D 595495 CDS YP_006165669.1 386701832 12759031 3526405..3526539 1 NC_017660.1 small toxic polypeptide 3526539 ldrA 12759031 ldrA Escherichia coli KO11FL small toxic polypeptide YP_006165669.1 3526405 D 595495 CDS YP_006165670.1 386701833 12759032 complement(3526688..3527542) 1 NC_017660.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 3527542 kdsA 12759032 kdsA Escherichia coli KO11FL 2-dehydro-3-deoxyphosphooctonate aldolase YP_006165670.1 3526688 R 595495 CDS YP_006165671.1 386701834 12759033 complement(3527578..3528387) 1 NC_017660.1 COG2912 Uncharacterized conserved protein; ychA; hypothetical protein 3528387 12759033 KO11_16750 Escherichia coli KO11FL hypothetical protein YP_006165671.1 3527578 R 595495 CDS YP_006165672.1 386701835 12759034 complement(3528391..3528783) 1 NC_017660.1 COG3094 Uncharacterized protein conserved in bacteria; ychQ; hypothetical protein 3528783 12759034 KO11_16755 Escherichia coli KO11FL hypothetical protein YP_006165672.1 3528391 R 595495 CDS YP_006165673.1 386701836 12759035 complement(3528780..3529613) 1 NC_017660.1 COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3529613 prmC 12759035 prmC Escherichia coli KO11FL N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_006165673.1 3528780 R 595495 CDS YP_006165674.1 386701837 12759036 complement(3529613..3530695) 1 NC_017660.1 COG0216 Protein chain release factor A; peptide chain release factor 1 3530695 prfA 12759036 prfA Escherichia coli KO11FL peptide chain release factor 1 YP_006165674.1 3529613 R 595495 CDS YP_006165675.1 386701838 12759037 complement(3530737..3531993) 1 NC_017660.1 COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase 3531993 hemA 12759037 hemA Escherichia coli KO11FL glutamyl-tRNA reductase YP_006165675.1 3530737 R 595495 CDS YP_006165676.1 386701839 12759038 3532207..3532830 1 NC_017660.1 COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis; outer membrane lipoprotein LolB 3532830 lolB 12759038 lolB Escherichia coli KO11FL outer membrane lipoprotein LolB YP_006165676.1 3532207 D 595495 CDS YP_006165677.1 386701840 12759039 3532830..3533681 1 NC_017660.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3533681 ipk 12759039 ipk Escherichia coli KO11FL 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_006165677.1 3532830 D 595495 CDS YP_006165678.1 386701841 12759040 3533766..3534779 1 NC_017660.1 COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 3534779 prs 12759040 prs Escherichia coli KO11FL ribose-phosphate pyrophosphokinase YP_006165678.1 3533766 D 595495 CDS YP_006165679.1 386701842 12759041 3534904..3536583 1 NC_017660.1 COG0659 Sulfate permease and related transporters (MFS superfamily); putative transporter 3536583 ychM 12759041 ychM Escherichia coli KO11FL putative transporter YP_006165679.1 3534904 D 595495 CDS YP_006165680.1 386701843 12759042 complement(3536638..3536916) 1 NC_017660.1 ychH; hypothetical protein 3536916 12759042 KO11_16795 Escherichia coli KO11FL hypothetical protein YP_006165680.1 3536638 R 595495 CDS YP_006165681.1 386701844 12759043 3537194..3537778 1 NC_017660.1 COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 3537778 pth 12759043 pth Escherichia coli KO11FL peptidyl-tRNA hydrolase YP_006165681.1 3537194 D 595495 CDS YP_006165682.1 386701845 12759044 3537895..3538986 1 NC_017660.1 COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF 3538986 ychF 12759044 ychF Escherichia coli KO11FL GTP-binding protein YchF YP_006165682.1 3537895 D 595495 CDS YP_006165683.1 386701846 12759045 complement(3539279..3539482) 1 NC_017660.1 hypothetical protein 3539482 12759045 KO11_16810 Escherichia coli KO11FL hypothetical protein YP_006165683.1 3539279 R 595495 CDS YP_006165684.1 386701847 12759046 3539827..3542712 1 NC_017660.1 COG3468 Type V secretory pathway, adhesin AidA; putative adhesin 3542712 ycgV 12759046 ycgV Escherichia coli KO11FL putative adhesin YP_006165684.1 3539827 D 595495 CDS YP_006165685.1 386701848 12759047 complement(3542812..3544731) 1 NC_017660.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism; DNA-binding transcriptional regulator DhaR 3544731 dhaR 12759047 dhaR Escherichia coli KO11FL DNA-binding transcriptional regulator DhaR YP_006165685.1 3542812 R 595495 CDS YP_006165686.1 386701849 12759048 3544959..3546029 1 NC_017660.1 COG2376 Dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 3546029 dhaK 12759048 dhaK Escherichia coli KO11FL dihydroxyacetone kinase subunit DhaK YP_006165686.1 3544959 D 595495 CDS YP_006165687.1 386701850 12759049 3546040..3546672 1 NC_017660.1 COG2376 Dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaL 3546672 dhaL 12759049 dhaL Escherichia coli KO11FL dihydroxyacetone kinase subunit DhaL YP_006165687.1 3546040 D 595495 CDS YP_006165688.1 386701851 12759050 3546683..3548101 1 NC_017660.1 COG3412 Uncharacterized protein conserved in bacteria; dihydroxyacetone kinase subunit DhaM 3548101 dhaM 12759050 dhaM Escherichia coli KO11FL dihydroxyacetone kinase subunit DhaM YP_006165688.1 3546683 D 595495 CDS YP_006165689.1 386701852 12759051 3548421..3550118 1 NC_017660.1 COG1626 Neutral trehalase; trehalase 3550118 treA 12759051 treA Escherichia coli KO11FL trehalase YP_006165689.1 3548421 D 595495 CDS YP_006165690.1 386701853 12759052 complement(3550197..3550637) 1 NC_017660.1 ycgY; hypothetical protein 3550637 12759052 KO11_16845 Escherichia coli KO11FL hypothetical protein YP_006165690.1 3550197 R 595495 CDS YP_006165691.1 386701854 12759053 complement(3550815..3551069) 1 NC_017660.1 COG2261 Predicted membrane protein; ymgE; hypothetical protein 3551069 12759053 KO11_16850 Escherichia coli KO11FL hypothetical protein YP_006165691.1 3550815 R 595495 CDS YP_006165692.1 386701855 12759054 3551270..3552004 1 NC_017660.1 COG5581 Predicted glycosyltransferase; YcgR protein 3552004 ycgR 12759054 ycgR Escherichia coli KO11FL YcgR protein YP_006165692.1 3551270 D 595495 CDS YP_006165693.1 386701856 12759055 complement(3552006..3552617) 1 NC_017660.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic murein endotransglycosylase E 3552617 emtA 12759055 emtA Escherichia coli KO11FL lytic murein endotransglycosylase E YP_006165693.1 3552006 R 595495 CDS YP_006165694.1 386701857 12759056 3552717..3553631 1 NC_017660.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; L,D-carboxypeptidase A 3553631 ldcA 12759056 ldcA Escherichia coli KO11FL L,D-carboxypeptidase A YP_006165694.1 3552717 D 595495 CDS YP_006165695.1 386701858 12759057 3553726..3555462 1 NC_017660.1 COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain; potassium/proton antiporter 3555462 cvrA 12759057 cvrA Escherichia coli KO11FL potassium/proton antiporter YP_006165695.1 3553726 D 595495 CDS YP_006165696.1 386701859 12759058 complement(3555848..3556918) 1 NC_017660.1 COG0787 Alanine racemase; alanine racemase 3556918 dadX 12759058 dadX Escherichia coli KO11FL alanine racemase YP_006165696.1 3555848 R 595495 CDS YP_006165697.1 386701860 12759059 complement(3556928..3558226) 1 NC_017660.1 COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase small subunit 3558226 dadA 12759059 dadA Escherichia coli KO11FL D-amino acid dehydrogenase small subunit YP_006165697.1 3556928 R 595495 CDS YP_006165698.1 386701861 12759060 3558556..3560088 1 NC_017660.1 COG2719 Uncharacterized conserved protein; SpoVR family protein 3560088 ycgB 12759060 ycgB Escherichia coli KO11FL SpoVR family protein YP_006165698.1 3558556 D 595495 CDS YP_006165699.1 386701862 12759061 complement(3560140..3560859) 1 NC_017660.1 COG2186 Transcriptional regulators; fatty acid metabolism regulator 3560859 fadR 12759061 fadR Escherichia coli KO11FL fatty acid metabolism regulator YP_006165699.1 3560140 R 595495 CDS YP_006165700.1 386701863 12759062 3561080..3562621 1 NC_017660.1 COG3067 Na+/H+ antiporter; sodium/proton antiporter 3562621 nhaB 12759062 nhaB Escherichia coli KO11FL sodium/proton antiporter YP_006165700.1 3561080 D 595495 CDS YP_006165701.1 386701864 12759063 3562767..3563297 1 NC_017660.1 COG1495 Disulfide bond formation protein DsbB; disulfide bond formation protein B 3563297 dsdB 12759063 dsdB Escherichia coli KO11FL disulfide bond formation protein B YP_006165701.1 3562767 D 595495 CDS YP_006165702.1 386701865 12759064 complement(3563343..3564611) 1 NC_017660.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA polymerase V subunit UmuC 3564611 umuC 12759064 umuC Escherichia coli KO11FL DNA polymerase V subunit UmuC YP_006165702.1 3563343 R 595495 CDS YP_006165703.1 386701866 12759065 complement(3564611..3565030) 1 NC_017660.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); DNA polymerase V subunit UmuD 3565030 umuD 12759065 umuD Escherichia coli KO11FL DNA polymerase V subunit UmuD YP_006165703.1 3564611 R 595495 CDS YP_006165704.1 386701867 12759066 3565648..3565911 1 NC_017660.1 gene fragment; hemolysin E 3565911 hlyE1 12759066 hlyE1 Escherichia coli KO11FL hemolysin E YP_006165704.1 3565648 D 595495 CDS YP_006165705.1 386701868 12759067 3566031..3566312 1 NC_017660.1 gene fragment; hemolysin E 3566312 hlyE2 12759067 hlyE2 Escherichia coli KO11FL hemolysin E YP_006165705.1 3566031 D 595495 CDS YP_006165706.1 386701869 12759068 complement(3566519..3566980) 1 NC_017660.1 COG2983 Uncharacterized conserved protein; hypothetical protein 3566980 12759068 KO11_16925 Escherichia coli KO11FL hypothetical protein YP_006165706.1 3566519 R 595495 CDS YP_006165707.1 386701870 12759069 complement(3567057..3567716) 1 NC_017660.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); ycgN; hypothetical protein 3567716 12759069 KO11_16930 Escherichia coli KO11FL hypothetical protein YP_006165707.1 3567057 R 595495 CDS YP_006165708.1 386701871 12759070 complement(3567788..3568081) 1 NC_017660.1 COG3100 Uncharacterized protein conserved in bacteria; ycgM; hypothetical protein 3568081 12759070 KO11_16935 Escherichia coli KO11FL hypothetical protein YP_006165708.1 3567788 R 595495 CDS YP_006165709.1 386701872 12759071 3568323..3568724 1 NC_017660.1 ycgL; hypothetical protein 3568724 12759071 KO11_16940 Escherichia coli KO11FL hypothetical protein YP_006165709.1 3568323 D 595495 CDS YP_006165710.1 386701873 12759072 complement(3568844..3569212) 1 NC_017660.1 ycgJ; hypothetical protein 3569212 12759072 KO11_16945 Escherichia coli KO11FL hypothetical protein YP_006165710.1 3568844 R 595495 CDS YP_006165711.1 386701874 12759073 3569732..3570427 1 NC_017660.1 COG0850 Septum formation inhibitor; septum formation inhibitor 3570427 minC 12759073 minC Escherichia coli KO11FL septum formation inhibitor YP_006165711.1 3569732 D 595495 CDS YP_006165712.1 386701875 12759074 3570451..3571263 1 NC_017660.1 COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor MinD 3571263 minD 12759074 minD Escherichia coli KO11FL cell division inhibitor MinD YP_006165712.1 3570451 D 595495 CDS YP_006165713.1 386701876 12759075 3571267..3571533 1 NC_017660.1 COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE 3571533 minE 12759075 minE Escherichia coli KO11FL cell division topological specificity factor MinE YP_006165713.1 3571267 D 595495 CDS YP_006165714.1 386701877 12759076 complement(3571905..3572231) 1 NC_017660.1 adhesin-like autotransporter 3572231 ycgI 12759076 ycgI Escherichia coli KO11FL adhesin-like autotransporter YP_006165714.1 3571905 R 595495 CDS YP_006165715.1 386701878 12759077 3572825..3573169 1 NC_017660.1 ymgG; hypothetical protein 3573169 12759077 KO11_16970 Escherichia coli KO11FL hypothetical protein YP_006165715.1 3572825 D 595495 CDS YP_006165716.1 386701879 12759078 3573179..3573508 1 NC_017660.1 ymgD; hypothetical protein 3573508 12759078 KO11_16975 Escherichia coli KO11FL hypothetical protein YP_006165716.1 3573179 D 595495 CDS YP_006165717.1 386701880 12759079 complement(3573565..3575886) 1 NC_017660.1 COG3468 Type V secretory pathway, adhesin AidA; AidA-I adhesin-like protein 3575886 ycgH 12759079 ycgH Escherichia coli KO11FL AidA-I adhesin-like protein YP_006165717.1 3573565 R 595495 CDS YP_006165718.1 386701881 12759080 complement(3576003..3576212) 1 NC_017660.1 hypothetical protein 3576212 12759080 KO11_16985 Escherichia coli KO11FL hypothetical protein YP_006165718.1 3576003 R 595495 CDS YP_006165719.1 386701882 12759081 complement(3576612..3576830) 1 NC_017660.1 ymgF; hypothetical protein 3576830 12759081 KO11_16990 Escherichia coli KO11FL hypothetical protein YP_006165719.1 3576612 R 595495 CDS YP_006165720.1 386701883 12759082 complement(3576962..3578485) 1 NC_017660.1 COG2200 FOG: EAL domain; ycgG; hypothetical protein 3578485 12759082 KO11_16995 Escherichia coli KO11FL hypothetical protein YP_006165720.1 3576962 R 595495 CDS YP_006165721.1 386701884 12759083 complement(3578817..3579065) 1 NC_017660.1 ymgC; hypothetical protein 3579065 12759083 KO11_17000 Escherichia coli KO11FL hypothetical protein YP_006165721.1 3578817 R 595495 CDS YP_006165722.1 386701885 12759084 complement(3579178..3579444) 1 NC_017660.1 ariR; hypothetical protein 3579444 12759084 KO11_17005 Escherichia coli KO11FL hypothetical protein YP_006165722.1 3579178 R 595495 CDS YP_006165723.1 386701886 12759085 complement(3579473..3579745) 1 NC_017660.1 ymgA; hypothetical protein 3579745 12759085 KO11_17010 Escherichia coli KO11FL hypothetical protein YP_006165723.1 3579473 R 595495 CDS YP_006165724.1 386701887 12759086 complement(3579788..3580024) 1 NC_017660.1 ycgZ; hypothetical protein 3580024 12759086 KO11_17015 Escherichia coli KO11FL hypothetical protein YP_006165724.1 3579788 R 595495 CDS YP_006165725.1 386701888 12759087 3580338..3581549 1 NC_017660.1 COG2200 FOG: EAL domain; putative FAD-binding phosphodiesterase 3581549 ycgF 12759087 ycgF Escherichia coli KO11FL putative FAD-binding phosphodiesterase YP_006165725.1 3580338 D 595495 CDS YP_006165726.1 386701889 12759088 3581754..3582485 1 NC_017660.1 COG0789 Predicted transcriptional regulators; putative DNA-binding transcriptional regulator 3582485 ycgE 12759088 ycgE Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006165726.1 3581754 D 595495 CDS YP_006165727.1 386701890 12759089 3582706..3583110 1 NC_017660.1 COG5562 Phage envelope protein; ycgX; hypothetical protein 3583110 12759089 KO11_17030 Escherichia coli KO11FL hypothetical protein YP_006165727.1 3582706 D 595495 CDS YP_006165728.1 386701891 12759090 3583806..3584129 1 NC_017660.1 anti-adapter protein IraM 3584129 iraM 12759090 iraM Escherichia coli KO11FL anti-adapter protein IraM YP_006165728.1 3583806 D 595495 CDS YP_006165729.1 386701892 12759091 complement(3584232..3585482) 1 NC_017660.1 COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase 3585482 icd 12759091 icd Escherichia coli KO11FL isocitrate dehydrogenase YP_006165729.1 3584232 R 595495 CDS YP_006165730.1 386701893 12759092 3585684..3586307 1 NC_017660.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridine synthase E 3586307 rluE 12759092 rluE Escherichia coli KO11FL 23S rRNA pseudouridine synthase E YP_006165730.1 3585684 D 595495 CDS YP_006165731.1 386701894 12759093 3586317..3586778 1 NC_017660.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Phosphatase nudJ 3586778 nudJ 12759093 nudJ Escherichia coli KO11FL Phosphatase nudJ YP_006165731.1 3586317 D 595495 CDS YP_006165732.1 386701895 12759094 3586832..3587938 1 NC_017660.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA 3587938 mnmA 12759094 mnmA Escherichia coli KO11FL tRNA-specific 2-thiouridylase MnmA YP_006165732.1 3586832 D 595495 CDS YP_006165733.1 386701896 12759095 3587974..3588615 1 NC_017660.1 COG2915 Uncharacterized protein involved in purine metabolism; putative lysogenization regulator 3588615 hflD 12759095 hflD Escherichia coli KO11FL putative lysogenization regulator YP_006165733.1 3587974 D 595495 CDS YP_006165734.1 386701897 12759096 3588619..3589989 1 NC_017660.1 COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 3589989 purB 12759096 purB Escherichia coli KO11FL adenylosuccinate lyase YP_006165734.1 3588619 D 595495 CDS YP_006165735.1 386701898 12759097 3590157..3590828 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator PhoP 3590828 phoP 12759097 phoP Escherichia coli KO11FL DNA-binding transcriptional regulator PhoP YP_006165735.1 3590157 D 595495 CDS YP_006165736.1 386701899 12759098 3590828..3592288 1 NC_017660.1 COG0642 Signal transduction histidine kinase; sensor protein PhoQ 3592288 phoQ 12759098 phoQ Escherichia coli KO11FL sensor protein PhoQ YP_006165736.1 3590828 D 595495 CDS YP_006165737.1 386701900 12759099 3592364..3593485 1 NC_017660.1 COG2850 Uncharacterized conserved protein; putative cytoplasmic protein 3593485 ycfD 12759099 ycfD Escherichia coli KO11FL putative cytoplasmic protein YP_006165737.1 3592364 D 595495 CDS YP_006165738.1 386701901 12759100 complement(3593631..3594860) 1 NC_017660.1 COG2195 Di- and tripeptidases; peptidase T 3594860 pepT 12759100 pepT Escherichia coli KO11FL peptidase T YP_006165738.1 3593631 R 595495 CDS YP_006165739.1 386701902 12759101 3595110..3596246 1 NC_017660.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; putrescine/spermidine ABC transporter ATPase 3596246 potA 12759101 potA Escherichia coli KO11FL putrescine/spermidine ABC transporter ATPase YP_006165739.1 3595110 D 595495 CDS YP_006165740.1 386701903 12759102 3596230..3597087 1 NC_017660.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I; spermidine/putrescine ABC transporter membrane protein 3597087 potB 12759102 potB Escherichia coli KO11FL spermidine/putrescine ABC transporter membrane protein YP_006165740.1 3596230 D 595495 CDS YP_006165741.1 386701904 12759103 3597084..3597878 1 NC_017660.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II; spermidine/putrescine ABC transporter membrane protein 3597878 potC 12759103 potC Escherichia coli KO11FL spermidine/putrescine ABC transporter membrane protein YP_006165741.1 3597084 D 595495 CDS YP_006165742.1 386701905 12759104 3597875..3598921 1 NC_017660.1 COG0687 Spermidine/putrescine-binding periplasmic protein; spermidine/putrescine ABC transporter substrate-binding protein 3598921 potD 12759104 potD Escherichia coli KO11FL spermidine/putrescine ABC transporter substrate-binding protein YP_006165742.1 3597875 D 595495 CDS YP_006165743.1 386701906 12759105 3598979..3599440 1 NC_017660.1 putative inner membrane protein 3599440 ymfA 12759105 ymfA Escherichia coli KO11FL putative inner membrane protein YP_006165743.1 3598979 D 595495 CDS YP_006165744.1 386701907 12759106 3599437..3600225 1 NC_017660.1 putative inner membrane protein 3600225 ycfZ 12759106 ycfZ Escherichia coli KO11FL putative inner membrane protein YP_006165744.1 3599437 D 595495 CDS YP_006165745.1 386701908 12759107 complement(3600364..3601185) 1 NC_017660.1 COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase 3601185 cobB 12759107 cobB Escherichia coli KO11FL NAD-dependent deacetylase YP_006165745.1 3600364 R 595495 CDS YP_006165746.1 386701909 12759108 complement(3601201..3602112) 1 NC_017660.1 COG1940 Transcriptional regulator/sugar kinase; N-acetyl-D-glucosamine kinase 3602112 nagK 12759108 nagK Escherichia coli KO11FL N-acetyl-D-glucosamine kinase YP_006165746.1 3601201 R 595495 CDS YP_006165747.1 386701910 12759109 complement(3602141..3603385) 1 NC_017660.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component; outer membrane-specific lipoprotein transporter subunit LolE 3603385 lolE 12759109 lolE Escherichia coli KO11FL outer membrane-specific lipoprotein transporter subunit LolE YP_006165747.1 3602141 R 595495 CDS YP_006165748.1 386701911 12759110 complement(3603385..3604086) 1 NC_017660.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component; lipoprotein transporter ATP-binding subunit 3604086 lolD 12759110 lolD Escherichia coli KO11FL lipoprotein transporter ATP-binding subunit YP_006165748.1 3603385 R 595495 CDS YP_006165749.1 386701912 12759111 complement(3604079..3605278) 1 NC_017660.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component; outer membrane-specific lipoprotein transporter subunit LolC 3605278 ycfU 12759111 ycfU Escherichia coli KO11FL outer membrane-specific lipoprotein transporter subunit LolC YP_006165749.1 3604079 R 595495 CDS YP_006165750.1 386701913 12759112 3605540..3606613 1 NC_017660.1 COG4763 Predicted membrane protein; putative inner membrane protein 3606613 ycfT 12759112 ycfT Escherichia coli KO11FL putative inner membrane protein YP_006165750.1 3605540 D 595495 CDS YP_006165751.1 386701914 12759113 3606741..3610187 1 NC_017660.1 COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 3610187 mfd 12759113 mfd Escherichia coli KO11FL transcription-repair coupling factor YP_006165751.1 3606741 D 595495 CDS YP_006165752.1 386701915 12759114 3610334..3611293 1 NC_017660.1 COG1376 Uncharacterized protein conserved in bacteria; ycfS; hypothetical protein 3611293 12759114 KO11_17155 Escherichia coli KO11FL hypothetical protein YP_006165752.1 3610334 D 595495 CDS YP_006165753.1 386701916 12759115 complement(3611376..3611633) 1 NC_017660.1 bhsA; hypothetical protein 3611633 12759115 KO11_17160 Escherichia coli KO11FL hypothetical protein YP_006165753.1 3611376 R 595495 CDS YP_006165754.1 386701917 12759116 3611796..3612506 1 NC_017660.1 COG1309 Transcriptional regulator; ycfQ; hypothetical protein 3612506 12759116 KO11_17165 Escherichia coli KO11FL hypothetical protein YP_006165754.1 3611796 D 595495 CDS YP_006165755.1 386701918 12759117 complement(3612568..3613095) 1 NC_017660.1 COG3134 Predicted outer membrane lipoprotein; ycfJ; hypothetical protein 3613095 12759117 KO11_17170 Escherichia coli KO11FL hypothetical protein YP_006165755.1 3612568 R 595495 CDS YP_006165756.1 386701919 12759118 complement(3613317..3614621) 1 NC_017660.1 COG1252 NADH dehydrogenase, FAD-containing subunit; respiratory NADH dehydrogenase 2/cupric reductase 3614621 ndh 12759118 ndh Escherichia coli KO11FL respiratory NADH dehydrogenase 2/cupric reductase YP_006165756.1 3613317 R 595495 CDS YP_006165757.1 386701920 12759119 complement(3615029..3615571) 1 NC_017660.1 COG3150 Predicted esterase; ycfP; hypothetical protein 3615571 12759119 KO11_17180 Escherichia coli KO11FL hypothetical protein YP_006165757.1 3615029 R 595495 CDS YP_006165758.1 386701921 12759120 complement(3615594..3616607) 1 NC_017660.1 COG1472 Beta-glucosidase-related glycosidases; beta-hexosaminidase 3616607 nagZ 12759120 nagZ Escherichia coli KO11FL beta-hexosaminidase YP_006165758.1 3615594 R 595495 CDS YP_006165759.1 386701922 12759121 complement(3616630..3617454) 1 NC_017660.1 COG0510 Predicted choline kinase involved in LPS biosynthesis; thiamine kinase 3617454 thiK 12759121 thiK Escherichia coli KO11FL thiamine kinase YP_006165759.1 3616630 R 595495 CDS YP_006165760.1 386701923 12759122 complement(3617435..3618076) 1 NC_017660.1 COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family); ycfM; hypothetical protein 3618076 12759122 KO11_17195 Escherichia coli KO11FL hypothetical protein YP_006165760.1 3617435 R 595495 CDS YP_006165761.1 386701924 12759123 complement(3618090..3618467) 1 NC_017660.1 COG5633 Predicted periplasmic lipoprotein; putative lipoprotein 3618467 ycfL 12759123 ycfL Escherichia coli KO11FL putative lipoprotein YP_006165761.1 3618090 R 595495 CDS YP_006165762.1 386701925 12759124 complement(3618470..3618829) 1 NC_017660.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; purine nucleoside phosphoramidase 3618829 hinT 12759124 hinT Escherichia coli KO11FL purine nucleoside phosphoramidase YP_006165762.1 3618470 R 595495 CDS YP_006165763.1 386701926 12759125 3619163..3621352 1 NC_017660.1 COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; ferric-rhodotorulic acid outer membrane transporter 3621352 fhuE 12759125 fhuE Escherichia coli KO11FL ferric-rhodotorulic acid outer membrane transporter YP_006165763.1 3619163 D 595495 CDS YP_006165764.1 386701927 12759126 complement(3621412..3622845) 1 NC_017660.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; PTS system glucose-specific transporter subunit IIBC 3622845 ptsG 12759126 ptsG Escherichia coli KO11FL PTS system glucose-specific transporter subunit IIBC YP_006165764.1 3621412 R 595495 CDS YP_006165765.1 386701928 12759127 complement(3623140..3623937) 1 NC_017660.1 COG0084 Mg-dependent DNase; putative DNAse 3623937 ycfH 12759127 ycfH Escherichia coli KO11FL putative DNAse YP_006165765.1 3623140 R 595495 CDS YP_006165766.1 386701929 12759128 complement(3623948..3624952) 1 NC_017660.1 COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 3624952 holB 12759128 holB Escherichia coli KO11FL DNA polymerase III subunit delta' YP_006165766.1 3623948 R 595495 CDS YP_006165767.1 386701930 12759129 complement(3624949..3625590) 1 NC_017660.1 COG0125 Thymidylate kinase; thymidylate kinase 3625590 tmk 12759129 tmk Escherichia coli KO11FL thymidylate kinase YP_006165767.1 3624949 R 595495 CDS YP_006165768.1 386701931 12759130 complement(3625580..3626602) 1 NC_017660.1 COG1559 Predicted periplasmic solute-binding protein; putative aminodeoxychorismate lyase 3626602 yceG 12759130 yceG Escherichia coli KO11FL putative aminodeoxychorismate lyase YP_006165768.1 3625580 R 595495 CDS YP_006165769.1 386701932 12759131 complement(3626605..3627414) 1 NC_017660.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; 4-amino-4-deoxychorismate lyase 3627414 pabC 12759131 pabC Escherichia coli KO11FL 4-amino-4-deoxychorismate lyase YP_006165769.1 3626605 R 595495 CDS YP_006165770.1 386701933 12759132 complement(3627534..3628775) 1 NC_017660.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II 3628775 fabF 12759132 fabF Escherichia coli KO11FL 3-oxoacyl-(acyl carrier protein) synthase II YP_006165770.1 3627534 R 595495 CDS YP_006165771.1 386701934 12759133 complement(3628863..3629099) 1 NC_017660.1 COG0236 Acyl carrier protein; acpP; hypothetical protein 3629099 12759133 KO11_17250 Escherichia coli KO11FL hypothetical protein YP_006165771.1 3628863 R 595495 CDS YP_006165772.1 386701935 12759134 complement(3629310..3630044) 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase 3630044 fabG 12759134 fabG Escherichia coli KO11FL 3-ketoacyl-ACP reductase YP_006165772.1 3629310 R 595495 CDS YP_006165773.1 386701936 12759135 complement(3630057..3630986) 1 NC_017660.1 COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl-CoA-[acyl-carrier-protein] transacylase 3630986 fabD 12759135 fabD Escherichia coli KO11FL malonyl-CoA-[acyl-carrier-protein] transacylase YP_006165773.1 3630057 R 595495 CDS YP_006165774.1 386701937 12759136 complement(3631002..3631955) 1 NC_017660.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase 3631955 fabH 12759136 fabH Escherichia coli KO11FL 3-oxoacyl-ACP synthase YP_006165774.1 3631002 R 595495 CDS YP_006165775.1 386701938 12759137 complement(3632023..3633063) 1 NC_017660.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative phosphate acyltransferase 3633063 plsX 12759137 plsX Escherichia coli KO11FL putative phosphate acyltransferase YP_006165775.1 3632023 R 595495 CDS YP_006165776.1 386701939 12759138 complement(3633174..3633347) 1 NC_017660.1 COG0333 Ribosomal protein L32; 50S ribosomal protein L32 3633347 rpmF 12759138 rpmF Escherichia coli KO11FL 50S ribosomal protein L32 YP_006165776.1 3633174 R 595495 CDS YP_006165777.1 386701940 12759139 complement(3633399..3633920) 1 NC_017660.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; yceD; hypothetical protein 3633920 12759139 KO11_17280 Escherichia coli KO11FL hypothetical protein YP_006165777.1 3633399 R 595495 CDS YP_006165778.1 386701941 12759140 3634080..3634703 1 NC_017660.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 3634703 yceF 12759140 yceF Escherichia coli KO11FL Maf-like protein YP_006165778.1 3634080 D 595495 CDS YP_006165779.1 386701942 12759141 complement(3634815..3635774) 1 NC_017660.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA pseudouridylate synthase C 3635774 rluC 12759141 rluC Escherichia coli KO11FL 23S rRNA pseudouridylate synthase C YP_006165779.1 3634815 R 595495 CDS YP_006165780.1 386701943 12759142 complement(3635892..3636266) 1 NC_017660.1 yceQ; hypothetical protein 3636266 12759142 KO11_17295 Escherichia coli KO11FL hypothetical protein YP_006165780.1 3635892 R 595495 CDS YP_006165781.1 386701944 12759143 3636347..3639532 1 NC_017660.1 COG1530 Ribonucleases G and E; ribonuclease E 3639532 rne 12759143 rne Escherichia coli KO11FL ribonuclease E YP_006165781.1 3636347 D 595495 CDS YP_006165782.1 386701945 12759144 complement(3639729..3640682) 1 NC_017660.1 COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL 3640682 flgL 12759144 flgL Escherichia coli KO11FL flagellar hook-associated protein FlgL YP_006165782.1 3639729 R 595495 CDS YP_006165783.1 386701946 12759145 complement(3640694..3642337) 1 NC_017660.1 COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK 3642337 flgK 12759145 flgK Escherichia coli KO11FL flagellar hook-associated protein FlgK YP_006165783.1 3640694 R 595495 CDS YP_006165784.1 386701947 12759146 complement(3642403..3643344) 1 NC_017660.1 COG3951 Rod binding protein; flagellar rod assembly protein/muramidase FlgJ 3643344 flgJ 12759146 flgJ Escherichia coli KO11FL flagellar rod assembly protein/muramidase FlgJ YP_006165784.1 3642403 R 595495 CDS YP_006165785.1 386701948 12759147 complement(3643344..3644441) 1 NC_017660.1 COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein 3644441 flgI 12759147 flgI Escherichia coli KO11FL flagellar basal body P-ring protein YP_006165785.1 3643344 R 595495 CDS YP_006165786.1 386701949 12759148 complement(3644453..3645151) 1 NC_017660.1 COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein 3645151 flgH 12759148 flgH Escherichia coli KO11FL flagellar basal body L-ring protein YP_006165786.1 3644453 R 595495 CDS YP_006165787.1 386701950 12759149 complement(3645204..3645986) 1 NC_017660.1 COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG 3645986 flgG 12759149 flgG Escherichia coli KO11FL flagellar basal body rod protein FlgG YP_006165787.1 3645204 R 595495 CDS YP_006165788.1 386701951 12759150 complement(3646158..3646913) 1 NC_017660.1 COG4787 Flagellar basal body rod protein; flagellar basal body rod protein FlgF 3646913 flgF 12759150 flgF Escherichia coli KO11FL flagellar basal body rod protein FlgF YP_006165788.1 3646158 R 595495 CDS YP_006165789.1 386701952 12759151 complement(3646933..3648141) 1 NC_017660.1 COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 3648141 flgE 12759151 flgE Escherichia coli KO11FL flagellar hook protein FlgE YP_006165789.1 3646933 R 595495 CDS YP_006165790.1 386701953 12759152 complement(3648166..3648861) 1 NC_017660.1 COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein 3648861 flgD 12759152 flgD Escherichia coli KO11FL flagellar basal body rod modification protein YP_006165790.1 3648166 R 595495 CDS YP_006165791.1 386701954 12759153 complement(3648873..3649277) 1 NC_017660.1 COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC 3649277 flgC 12759153 flgC Escherichia coli KO11FL flagellar basal body rod protein FlgC YP_006165791.1 3648873 R 595495 CDS YP_006165792.1 386701955 12759154 complement(3649320..3649697) 1 NC_017660.1 COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB 3649697 flgB 12759154 flgB Escherichia coli KO11FL flagellar basal body rod protein FlgB YP_006165792.1 3649320 R 595495 CDS YP_006165793.1 386701956 12759155 3649853..3650512 1 NC_017660.1 COG1261 Flagellar basal body P-ring biosynthesis protein; flagellar basal body P-ring biosynthesis protein FlgA 3650512 flgA 12759155 flgA Escherichia coli KO11FL flagellar basal body P-ring biosynthesis protein FlgA YP_006165793.1 3649853 D 595495 CDS YP_006165794.1 386701957 12759156 3650588..3650881 1 NC_017660.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor); anti-sigma-28 factor FlgM 3650881 flgM 12759156 flgM Escherichia coli KO11FL anti-sigma-28 factor FlgM YP_006165794.1 3650588 D 595495 CDS YP_006165795.1 386701958 12759157 3650886..3651302 1 NC_017660.1 COG3418 Flagellar biosynthesis/type III secretory pathway chaperone; flagella synthesis chaperone protein FlgN 3651302 flgN 12759157 flgN Escherichia coli KO11FL flagella synthesis chaperone protein FlgN YP_006165795.1 3650886 D 595495 CDS YP_006165796.1 386701959 12759158 complement(3651342..3652877) 1 NC_017660.1 COG0728 Uncharacterized membrane protein, putative virulence factor; putative inner membrane protein MviN 3652877 mviN 12759158 mviN Escherichia coli KO11FL putative inner membrane protein MviN YP_006165796.1 3651342 R 595495 CDS YP_006165797.1 386701960 12759159 complement(3652987..3653910) 1 NC_017660.1 COG0673 Predicted dehydrogenases and related proteins; putative oxidoreductase with NAD(P)-binding Rossmann-fold domain 3653910 mviM 12759159 mviM Escherichia coli KO11FL putative oxidoreductase with NAD(P)-binding Rossmann-fold domain YP_006165797.1 3652987 R 595495 CDS YP_006165798.1 386701961 12759160 complement(3653912..3654559) 1 NC_017660.1 COG3132 Uncharacterized protein conserved in bacteria; yceH; hypothetical protein 3654559 12759160 KO11_17395 Escherichia coli KO11FL hypothetical protein YP_006165798.1 3653912 R 595495 CDS YP_006165799.1 386701962 12759161 complement(3654570..3655154) 1 NC_017660.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; ribosomal-protein-S5-alanine N-acetyltransferase 3655154 rimJ 12759161 rimJ Escherichia coli KO11FL ribosomal-protein-S5-alanine N-acetyltransferase YP_006165799.1 3654570 R 595495 CDS YP_006165800.1 386701963 12759162 3655390..3656598 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein MdtH 3656598 mdtH 12759162 mdtH Escherichia coli KO11FL multidrug resistance protein MdtH YP_006165800.1 3655390 D 595495 CDS YP_006165801.1 386701964 12759163 3656662..3657309 1 NC_017660.1 COG2999 Glutaredoxin 2; glutaredoxin 3657309 grxB 12759163 grxB Escherichia coli KO11FL glutaredoxin YP_006165801.1 3656662 D 595495 CDS YP_006165802.1 386701965 12759164 3657443..3658003 1 NC_017660.1 lipoprotein 3658003 yceB 12759164 yceB Escherichia coli KO11FL lipoprotein YP_006165802.1 3657443 D 595495 CDS YP_006165803.1 386701966 12759165 3658109..3659155 1 NC_017660.1 COG0418 Dihydroorotase; dihydroorotase 3659155 pyrC 12759165 pyrC Escherichia coli KO11FL dihydroorotase YP_006165803.1 3658109 D 595495 CDS YP_006165804.1 386701967 12759166 3659229..3659474 1 NC_017660.1 DNA damage-inducible protein I 3659474 dinI 12759166 dinI Escherichia coli KO11FL DNA damage-inducible protein I YP_006165804.1 3659229 D 595495 CDS YP_006165805.1 386701968 12759167 3659761..3660018 1 NC_017660.1 biofilm formation regulatory protein BssS 3660018 bssS 12759167 bssS Escherichia coli KO11FL biofilm formation regulatory protein BssS YP_006165805.1 3659761 D 595495 CDS YP_006165806.1 386701969 12759168 3660133..3661251 1 NC_017660.1 COG0665 Glycine/D-amino acid oxidases (deaminating); N-methyltryptophan oxidase 3661251 solA 12759168 solA Escherichia coli KO11FL N-methyltryptophan oxidase YP_006165806.1 3660133 D 595495 CDS YP_006165807.1 386701970 12759169 3661299..3661412 1 NC_017660.1 yceO; hypothetical protein 3661412 12759169 KO11_17440 Escherichia coli KO11FL hypothetical protein YP_006165807.1 3661299 D 595495 CDS YP_006165808.1 386701971 12759170 3661673..3662239 1 NC_017660.1 COG3038 Cytochrome B561; putative cytochrome 3662239 yceJ 12759170 yceJ Escherichia coli KO11FL putative cytochrome YP_006165808.1 3661673 D 595495 CDS YP_006165809.1 386701972 12759171 3662243..3662818 1 NC_017660.1 COG2353 Uncharacterized conserved protein; yceI; hypothetical protein 3662818 12759171 KO11_17450 Escherichia coli KO11FL hypothetical protein YP_006165809.1 3662243 D 595495 CDS YP_006165810.1 386701973 12759172 complement(3662860..3663912) 1 NC_017660.1 COG1054 Predicted sulfurtransferase; putative rhodanese-related sulfurtransferase 3663912 yceA 12759172 yceA Escherichia coli KO11FL putative rhodanese-related sulfurtransferase YP_006165810.1 3662860 R 595495 CDS YP_006165811.1 386701974 12759173 3664137..3665057 1 NC_017660.1 COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 3665057 lpxL 12759173 lpxL Escherichia coli KO11FL lipid A biosynthesis lauroyl acyltransferase YP_006165811.1 3664137 D 595495 CDS YP_006165812.1 386701975 12759174 3665229..3666455 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; drug efflux system protein MdtG 3666455 mdtG 12759174 mdtG Escherichia coli KO11FL drug efflux system protein MdtG YP_006165812.1 3665229 D 595495 CDS YP_006165813.1 386701976 12759175 3666538..3666912 1 NC_017660.1 secY/secA suppressor protein 3666912 msyB 12759175 msyB Escherichia coli KO11FL secY/secA suppressor protein YP_006165813.1 3666538 D 595495 CDS YP_006165814.1 386701977 12759176 complement(3666913..3667140) 1 NC_017660.1 COG5645 Predicted periplasmic lipoprotein; lipoprotein 3667140 yceK 12759176 yceK Escherichia coli KO11FL lipoprotein YP_006165814.1 3666913 R 595495 CDS YP_006165815.1 386701978 12759177 complement(3667313..3669856) 1 NC_017660.1 COG2943 Membrane glycosyltransferase; glucosyltransferase MdoH 3669856 mdoH 12759177 mdoH Escherichia coli KO11FL glucosyltransferase MdoH YP_006165815.1 3667313 R 595495 CDS YP_006165816.1 386701979 12759178 complement(3669849..3671402) 1 NC_017660.1 COG3131 Periplasmic glucans biosynthesis protein; glucan biosynthesis protein G 3671402 mdoG 12759178 mdoG Escherichia coli KO11FL glucan biosynthesis protein G YP_006165816.1 3669849 R 595495 CDS YP_006165817.1 386701980 12759179 3671778..3672935 1 NC_017660.1 glucans biosynthesis protein 3672935 opgC 12759179 opgC Escherichia coli KO11FL glucans biosynthesis protein YP_006165817.1 3671778 D 595495 CDS YP_006165818.1 386701981 12759180 complement(3672943..3674364) 1 NC_017660.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase D/Transphosphatidylase 3674364 ymdC 12759180 ymdC Escherichia coli KO11FL phospholipase D/Transphosphatidylase YP_006165818.1 3672943 R 595495 CDS YP_006165819.1 386701982 12759181 complement(3674366..3674899) 1 NC_017660.1 COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; RNase III inhibitor 3674899 ymdB 12759181 ymdB Escherichia coli KO11FL RNase III inhibitor YP_006165819.1 3674366 R 595495 CDS YP_006165820.1 386701983 12759182 complement(3675178..3675306) 1 NC_017660.1 COG0551 Zn-finger domain associated with topoisomerase type I; truncated by frameshift; ymdA; hypothetical protein 3675306 12759182 KO11_17505 Escherichia coli KO11FL hypothetical protein YP_006165820.1 3675178 R 595495 CDS YP_006165821.1 386701984 12759183 complement(3675427..3675759) 1 NC_017660.1 curli assembly protein CsgC 3675759 csgC 12759183 csgC Escherichia coli KO11FL curli assembly protein CsgC YP_006165821.1 3675427 R 595495 CDS YP_006165822.1 386701985 12759184 complement(3675818..3676273) 1 NC_017660.1 major curlin subunit 3676273 csgA 12759184 csgA Escherichia coli KO11FL major curlin subunit YP_006165822.1 3675818 R 595495 CDS YP_006165823.1 386701986 12759185 complement(3676314..3676769) 1 NC_017660.1 curlin minor subunit CsgB 3676769 csgB 12759185 csgB Escherichia coli KO11FL curlin minor subunit CsgB YP_006165823.1 3676314 R 595495 CDS YP_006165824.1 386701987 12759186 3677523..3678173 1 NC_017660.1 COG2771 DNA-binding HTH domain-containing proteins; DNA-binding transcriptional regulator CsgD 3678173 csgD 12759186 csgD Escherichia coli KO11FL DNA-binding transcriptional regulator CsgD YP_006165824.1 3677523 D 595495 CDS YP_006165825.1 386701988 12759187 3678178..3678567 1 NC_017660.1 COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; curli assembly protein CsgE 3678567 csgE 12759187 csgE Escherichia coli KO11FL curli assembly protein CsgE YP_006165825.1 3678178 D 595495 CDS YP_006165826.1 386701989 12759188 3678704..3679912 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3679912 12759188 KO11_17535 Escherichia coli KO11FL IS10 transposase YP_006165826.1 3678704 D 595495 CDS YP_006165827.1 386701990 12759189 3679930..3680346 1 NC_017660.1 curli assembly protein CsgF 3680346 csgF 12759189 csgF Escherichia coli KO11FL curli assembly protein CsgF YP_006165827.1 3679930 D 595495 CDS YP_006165828.1 386701991 12759190 3680373..3681206 1 NC_017660.1 COG1462 Uncharacterized protein involved in formation of curli polymers; curli production assembly/transport protein CsgG 3681206 csgG 12759190 csgG Escherichia coli KO11FL curli production assembly/transport protein CsgG YP_006165828.1 3680373 D 595495 CDS YP_006165829.1 386701992 12759191 complement(3681270..3681791) 1 NC_017660.1 putative inner membrane protein 3681791 ycdZ 12759191 ycdZ Escherichia coli KO11FL putative inner membrane protein YP_006165829.1 3681270 R 595495 CDS YP_006165830.1 386701993 12759192 complement(3681863..3682417) 1 NC_017660.1 COG3381 Uncharacterized component of anaerobic dehydrogenases; ycdY; hypothetical protein 3682417 12759192 KO11_17555 Escherichia coli KO11FL hypothetical protein YP_006165830.1 3681863 R 595495 CDS YP_006165831.1 386701994 12759193 complement(3682441..3683178) 1 NC_017660.1 COG1387 Histidinol phosphatase and related hydrolases of the PHP family; putative hydrolase 3683178 ycdX 12759193 ycdX Escherichia coli KO11FL putative hydrolase YP_006165831.1 3682441 R 595495 CDS YP_006165832.1 386701995 12759194 complement(3683233..3684171) 1 NC_017660.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; bifunctional glyoxylate/hydroxypyruvate reductase A 3684171 ghrA 12759194 ghrA Escherichia coli KO11FL bifunctional glyoxylate/hydroxypyruvate reductase A YP_006165832.1 3683233 R 595495 CDS YP_006165833.1 386701996 12759196 complement(3685409..3686395) 1 NC_017660.1 putative inner membrane protein 3686395 ycdU 12759196 ycdU Escherichia coli KO11FL putative inner membrane protein YP_006165833.1 3685409 R 595495 CDS YP_006165834.1 386701997 12759197 complement(3686392..3686883) 1 NC_017660.1 COG0331 (acyl-carrier-protein) S-malonyltransferase; ymdE; hypothetical protein 3686883 12759197 KO11_17575 Escherichia coli KO11FL hypothetical protein YP_006165834.1 3686392 R 595495 CDS YP_006165835.1 386701998 12759198 3686986..3687285 1 NC_017660.1 COG2963 Transposase and inactivated derivatives; transposase for IS3 3687285 insE3 12759198 insE3 Escherichia coli KO11FL transposase for IS3 YP_006165835.1 3686986 D 595495 CDS YP_006165836.1 386701999 12759199 3687282..3688148 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; transposase 3688148 insF3 12759199 insF3 Escherichia coli KO11FL transposase YP_006165836.1 3687282 D 595495 CDS YP_006165837.1 386702000 12759200 complement(3688189..3689313) 1 NC_017660.1 COG2199 FOG: GGDEF domain; fragmented by IS10 insertion; putative diguanylate cyclase 3689313 ycdT 12759200 ycdT Escherichia coli KO11FL putative diguanylate cyclase YP_006165837.1 3688189 R 595495 CDS YP_006165838.1 386702001 12759201 3689429..3690637 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3690637 12759201 KO11_17595 Escherichia coli KO11FL IS10 transposase YP_006165838.1 3689429 D 595495 CDS YP_006165839.1 386702002 12759202 3691472..3693895 1 NC_017660.1 COG0457 FOG: TPR repeat; outer membrane protein PgaA 3693895 pgaA 12759202 pgaA Escherichia coli KO11FL outer membrane protein PgaA YP_006165839.1 3691472 D 595495 CDS YP_006165840.1 386702003 12759203 3693904..3695922 1 NC_017660.1 COG0726 Predicted xylanase/chitin deacetylase; outer membrane N-deacetylase 3695922 pgaB 12759203 pgaB Escherichia coli KO11FL outer membrane N-deacetylase YP_006165840.1 3693904 D 595495 CDS YP_006165841.1 386702004 12759204 3695915..3697240 1 NC_017660.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; N-glycosyltransferase 3697240 pgaC 12759204 pgaC Escherichia coli KO11FL N-glycosyltransferase YP_006165841.1 3695915 D 595495 CDS YP_006165842.1 386702005 12759205 3697242..3697655 1 NC_017660.1 putative PGA biosynthesis protein 3697655 pgaD 12759205 pgaD Escherichia coli KO11FL putative PGA biosynthesis protein YP_006165842.1 3697242 D 595495 CDS YP_006165843.1 386702006 12759206 complement(3697705..3698769) 1 NC_017660.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; phoH; hypothetical protein 3698769 12759206 KO11_17620 Escherichia coli KO11FL hypothetical protein YP_006165843.1 3697705 R 595495 CDS YP_006165844.1 386702007 12759207 complement(3699032..3700303) 1 NC_017660.1 COG2837 Predicted iron-dependent peroxidase; efeB; hypothetical protein 3700303 12759207 KO11_17625 Escherichia coli KO11FL hypothetical protein YP_006165844.1 3699032 R 595495 CDS YP_006165845.1 386702008 12759208 complement(3700309..3701436) 1 NC_017660.1 COG2822 Predicted periplasmic lipoprotein involved in iron transport; inactive ferrous ion transporter periplasmic protein EfeO 3701436 efeO 12759208 efeO Escherichia coli KO11FL inactive ferrous ion transporter periplasmic protein EfeO YP_006165845.1 3700309 R 595495 CDS YP_006165846.1 386702009 12759209 complement(3701494..3702324) 1 NC_017660.1 COG0672 High-affinity Fe2+/Pb2+ permease; ferrous iron permease 3702324 efeU 12759209 efeU Escherichia coli KO11FL ferrous iron permease YP_006165846.1 3701494 R 595495 CDS YP_006165847.1 386702010 12759210 complement(3702990..3704498) 1 NC_017660.1 COG0591 Na+/proline symporter; proline:sodium symporter PutP 3704498 putP 12759210 putP Escherichia coli KO11FL proline:sodium symporter PutP YP_006165847.1 3702990 R 595495 CDS YP_006165848.1 386702011 12759211 complement(3704657..3704866) 1 NC_017660.1 hypothetical protein 3704866 12759211 KO11_17645 Escherichia coli KO11FL hypothetical protein YP_006165848.1 3704657 R 595495 CDS YP_006165849.1 386702012 12759212 3704921..3708883 1 NC_017660.1 COG0506 Proline dehydrogenase; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3708883 putA 12759212 putA Escherichia coli KO11FL trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_006165849.1 3704921 D 595495 CDS YP_006165850.1 386702013 12759213 complement(3708923..3709561) 1 NC_017660.1 COG1309 Transcriptional regulator; HTH-type transcriptional regulator RutR 3709561 rutR 12759213 rutR Escherichia coli KO11FL HTH-type transcriptional regulator RutR YP_006165850.1 3708923 R 595495 CDS YP_006165851.1 386702014 12759214 3709849..3710940 1 NC_017660.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; monooxygenase of the alternative pyrimidine degradation pathway 3710940 rutA 12759214 rutA Escherichia coli KO11FL monooxygenase of the alternative pyrimidine degradation pathway YP_006165851.1 3709849 D 595495 CDS YP_006165852.1 386702015 12759215 3710940..3711632 1 NC_017660.1 COG1335 Amidases related to nicotinamidase; hypothetical protein 3711632 rutB 12759215 rutB Escherichia coli KO11FL hypothetical protein YP_006165852.1 3710940 D 595495 CDS YP_006165853.1 386702016 12759216 3711644..3712030 1 NC_017660.1 COG0251 Putative translation initiation inhibitor, yjgF family; rutC; hypothetical protein 3712030 12759216 KO11_17670 Escherichia coli KO11FL hypothetical protein YP_006165853.1 3711644 D 595495 CDS YP_006165854.1 386702017 12759217 3712038..3712838 1 NC_017660.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); putative hydrolase 3712838 rutD 12759217 rutD Escherichia coli KO11FL putative hydrolase YP_006165854.1 3712038 D 595495 CDS YP_006165855.1 386702018 12759218 3712848..3713438 1 NC_017660.1 COG0778 Nitroreductase; malonic semialdehyde reductase 3713438 rutE 12759218 rutE Escherichia coli KO11FL malonic semialdehyde reductase YP_006165855.1 3712848 D 595495 CDS YP_006165856.1 386702019 12759219 3713449..3713943 1 NC_017660.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; Flavin reductase domain protein FMN-binding protein 3713943 rutF 12759219 rutF Escherichia coli KO11FL Flavin reductase domain protein FMN-binding protein YP_006165856.1 3713449 D 595495 CDS YP_006165857.1 386702020 12759220 3713964..3715292 1 NC_017660.1 COG2233 Xanthine/uracil permeases; putative transporter 3715292 rutG 12759220 rutG Escherichia coli KO11FL putative transporter YP_006165857.1 3713964 D 595495 CDS YP_006165858.1 386702021 12759221 complement(3715375..3715548) 1 NC_017660.1 COG3729 General stress protein; ymdF; hypothetical protein 3715548 12759221 KO11_17695 Escherichia coli KO11FL hypothetical protein YP_006165858.1 3715375 R 595495 CDS YP_006165859.1 386702022 12759222 3715921..3716517 1 NC_017660.1 COG0655 Multimeric flavodoxin WrbA; NAD(P)H:quinone oxidoreductase 3716517 wrbA 12759222 wrbA Escherichia coli KO11FL NAD(P)H:quinone oxidoreductase YP_006165859.1 3715921 D 595495 CDS YP_006165860.1 386702023 12759223 3716538..3716765 1 NC_017660.1 yccJ; hypothetical protein 3716765 12759223 KO11_17705 Escherichia coli KO11FL hypothetical protein YP_006165860.1 3716538 D 595495 CDS YP_006165861.1 386702024 12759224 complement(3716803..3718044) 1 NC_017660.1 glucose-1-phosphatase/inositol phosphatase 3718044 agp 12759224 agp Escherichia coli KO11FL glucose-1-phosphatase/inositol phosphatase YP_006165861.1 3716803 R 595495 CDS YP_006165862.1 386702025 12759225 complement(3718337..3718687) 1 NC_017660.1 gene fragment; yccE2; hypothetical protein 3718687 12759225 KO11_17715 Escherichia coli KO11FL hypothetical protein YP_006165862.1 3718337 R 595495 CDS YP_006165863.1 386702026 12759226 complement(3718703..3719593) 1 NC_017660.1 gene fragment; yccE1; hypothetical protein 3719593 12759226 KO11_17720 Escherichia coli KO11FL hypothetical protein YP_006165863.1 3718703 R 595495 CDS YP_006165864.1 386702027 12759227 3719854..3720774 1 NC_017660.1 COG2214 DnaJ-class molecular chaperone; curved DNA-binding protein CbpA 3720774 cbpA 12759227 cbpA Escherichia coli KO11FL curved DNA-binding protein CbpA YP_006165864.1 3719854 D 595495 CDS YP_006165865.1 386702028 12759228 3720774..3721079 1 NC_017660.1 chaperone-modulator protein CbpM 3721079 cbpM 12759228 cbpM Escherichia coli KO11FL chaperone-modulator protein CbpM YP_006165865.1 3720774 D 595495 CDS YP_006165866.1 386702029 12759229 complement(3721172..3721771) 1 NC_017660.1 COG3381 Uncharacterized component of anaerobic dehydrogenases; chaperone protein TorD 3721771 torD 12759229 torD Escherichia coli KO11FL chaperone protein TorD YP_006165866.1 3721172 R 595495 CDS YP_006165867.1 386702030 12759230 complement(3721768..3724314) 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; trimethylamine N-oxide reductase I catalytic subunit 3724314 torA 12759230 torA Escherichia coli KO11FL trimethylamine N-oxide reductase I catalytic subunit YP_006165867.1 3721768 R 595495 CDS YP_006165868.1 386702031 12759231 complement(3724314..3725486) 1 NC_017660.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; trimethylamine N-oxide reductase cytochrome c-type subunit 3725486 torC 12759231 torC Escherichia coli KO11FL trimethylamine N-oxide reductase cytochrome c-type subunit YP_006165868.1 3724314 R 595495 CDS YP_006165869.1 386702032 12759232 3725616..3726308 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator TorR 3726308 torR 12759232 torR Escherichia coli KO11FL DNA-binding transcriptional regulator TorR YP_006165869.1 3725616 D 595495 CDS YP_006165870.1 386702033 12759233 complement(3726281..3727309) 1 NC_017660.1 COG1879 ABC-type sugar transport system, periplasmic component; TMAO reductase system periplasmic protein TorT 3727309 torT 12759233 torT Escherichia coli KO11FL TMAO reductase system periplasmic protein TorT YP_006165870.1 3726281 R 595495 CDS YP_006165871.1 386702034 12759234 3727422..3730136 1 NC_017660.1 COG0642 Signal transduction histidine kinase; hybrid sensory histidine kinase TorS 3730136 torS 12759234 torS Escherichia coli KO11FL hybrid sensory histidine kinase TorS YP_006165871.1 3727422 D 595495 CDS YP_006165872.1 386702035 12759235 3730208..3731281 1 NC_017660.1 COG0348 Polyferredoxin; yccM; hypothetical protein 3731281 12759235 KO11_17765 Escherichia coli KO11FL hypothetical protein YP_006165872.1 3730208 D 595495 CDS YP_006165873.1 386702036 12759236 complement(3731329..3731502) 1 NC_017660.1 putative regulator of phosphatidylethanolamine synthesis 3731502 gnsA 12759236 gnsA Escherichia coli KO11FL putative regulator of phosphatidylethanolamine synthesis YP_006165873.1 3731329 R 595495 CDS YP_006165874.1 386702037 12759237 complement(3731492..3731755) 1 NC_017660.1 cold shock gene 3731755 ymcE 12759237 ymcE Escherichia coli KO11FL cold shock gene YP_006165874.1 3731492 R 595495 CDS YP_006165875.1 386702038 12759238 complement(3731896..3732108) 1 NC_017660.1 COG1278 Cold shock proteins; cold shock protein CspG 3732108 cspG 12759238 cspG Escherichia coli KO11FL cold shock protein CspG YP_006165875.1 3731896 R 595495 CDS YP_006165876.1 386702039 12759239 3732394..3732606 1 NC_017660.1 COG1278 Cold shock proteins; cold shock-like protein CspH 3732606 cspH 12759239 cspH Escherichia coli KO11FL cold shock-like protein CspH YP_006165876.1 3732394 D 595495 CDS YP_006165877.1 386702040 12759240 3733049..3733354 1 NC_017660.1 gfcA; hypothetical protein 3733354 12759240 KO11_17790 Escherichia coli KO11FL hypothetical protein YP_006165877.1 3733049 D 595495 CDS YP_006165878.1 386702041 12759241 3733461..3734105 1 NC_017660.1 putative outer membrane lipoprotein 3734105 gfcB 12759241 gfcB Escherichia coli KO11FL putative outer membrane lipoprotein YP_006165878.1 3733461 D 595495 CDS YP_006165879.1 386702042 12759242 3734102..3734848 1 NC_017660.1 gfcC; hypothetical protein 3734848 12759242 KO11_17800 Escherichia coli KO11FL hypothetical protein YP_006165879.1 3734102 D 595495 CDS YP_006165880.1 386702043 12759243 3734848..3736944 1 NC_017660.1 gfcD; hypothetical protein 3736944 12759243 KO11_17805 Escherichia coli KO11FL hypothetical protein YP_006165880.1 3734848 D 595495 CDS YP_006165881.1 386702044 12759244 3736990..3738129 1 NC_017660.1 COG1596 Periplasmic protein involved in polysaccharide export; polysaccharide export protein Wza 3738129 gfcE 12759244 gfcE Escherichia coli KO11FL polysaccharide export protein Wza YP_006165881.1 3736990 D 595495 CDS YP_006165882.1 386702045 12759245 3738117..3738563 1 NC_017660.1 COG0394 Protein-tyrosine-phosphatase; phosphotyrosine-protein phosphatase 3738563 etp 12759245 etp Escherichia coli KO11FL phosphotyrosine-protein phosphatase YP_006165882.1 3738117 D 595495 CDS YP_006165883.1 386702046 12759246 3738583..3740763 1 NC_017660.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; cryptic autophosphorylating protein tyrosine kinase Etk 3740763 etk 12759246 etk Escherichia coli KO11FL cryptic autophosphorylating protein tyrosine kinase Etk YP_006165883.1 3738583 D 595495 CDS YP_006165884.1 386702047 12759247 complement(3740878..3742206) 1 NC_017660.1 phosphoanhydride phosphorylase 3742206 appA 12759247 appA Escherichia coli KO11FL phosphoanhydride phosphorylase YP_006165884.1 3740878 R 595495 CDS YP_006165885.1 386702048 12759248 complement(3742256..3742348) 1 NC_017660.1 yccB; hypothetical protein 3742348 12759248 KO11_17830 Escherichia coli KO11FL hypothetical protein YP_006165885.1 3742256 R 595495 CDS YP_006165886.1 386702049 12759249 complement(3742361..3743497) 1 NC_017660.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome bd-II oxidase subunit 2 3743497 appB 12759249 appB Escherichia coli KO11FL cytochrome bd-II oxidase subunit 2 YP_006165886.1 3742361 R 595495 CDS YP_006165887.1 386702050 12759250 complement(3743509..3745053) 1 NC_017660.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome bd-II oxidase subunit 1 3745053 appC 12759250 appC Escherichia coli KO11FL cytochrome bd-II oxidase subunit 1 YP_006165887.1 3743509 R 595495 CDS YP_006165888.1 386702051 12759251 complement(3745187..3746044) 1 NC_017660.1 hydrogenase-1 operon protein HyaF 3746044 hyaF 12759251 hyaF Escherichia coli KO11FL hydrogenase-1 operon protein HyaF YP_006165888.1 3745187 R 595495 CDS YP_006165889.1 386702052 12759252 complement(3746041..3746439) 1 NC_017660.1 COG0526 Thiol-disulfide isomerase and thioredoxins; hydrogenase-1 operon protein HyaE 3746439 hyaE 12759252 hyaE Escherichia coli KO11FL hydrogenase-1 operon protein HyaE YP_006165889.1 3746041 R 595495 CDS YP_006165890.1 386702053 12759253 complement(3746436..3747023) 1 NC_017660.1 COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 1 maturation protease 3747023 hyaD 12759253 hyaD Escherichia coli KO11FL hydrogenase 1 maturation protease YP_006165890.1 3746436 R 595495 CDS YP_006165891.1 386702054 12759254 complement(3747020..3747727) 1 NC_017660.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; hydrogenase 1 b-type cytochrome subunit 3747727 hyaC 12759254 hyaC Escherichia coli KO11FL hydrogenase 1 b-type cytochrome subunit YP_006165891.1 3747020 R 595495 CDS YP_006165892.1 386702055 12759255 complement(3747746..3749539) 1 NC_017660.1 COG0374 Ni,Fe-hydrogenase I large subunit; hydrogenase 1 large subunit 3749539 hyaB 12759255 hyaB Escherichia coli KO11FL hydrogenase 1 large subunit YP_006165892.1 3747746 R 595495 CDS YP_006165893.1 386702056 12759256 complement(3749536..3750654) 1 NC_017660.1 COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase 1, small subunit 3750654 hyaA 12759256 hyaA Escherichia coli KO11FL hydrogenase 1, small subunit YP_006165893.1 3749536 R 595495 CDS YP_006165894.1 386702057 12759258 3751375..3752034 1 NC_017660.1 COG0670 Integral membrane protein, interacts with FtsH; HflBKC-binding inner membrane protein 3752034 yccA 12759258 yccA Escherichia coli KO11FL HflBKC-binding inner membrane protein YP_006165894.1 3751375 D 595495 CDS YP_006165895.1 386702058 12759259 3752125..3752454 1 NC_017660.1 COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit; sulfur transfer protein TusE 3752454 tusE 12759259 tusE Escherichia coli KO11FL sulfur transfer protein TusE YP_006165895.1 3752125 D 595495 CDS YP_006165896.1 386702059 12759260 complement(3752451..3752729) 1 NC_017660.1 COG1254 Acylphosphatases; acylphosphatase 3752729 yccX 12759260 yccX Escherichia coli KO11FL acylphosphatase YP_006165896.1 3752451 R 595495 CDS YP_006165897.1 386702060 12759261 3752824..3754014 1 NC_017660.1 COG1092 Predicted SAM-dependent methyltransferases; 23S rRNA m(5)C1962 methyltransferase 3754014 yccW 12759261 yccW Escherichia coli KO11FL 23S rRNA m(5)C1962 methyltransferase YP_006165897.1 3752824 D 595495 CDS YP_006165898.1 386702061 12759262 3754072..3754389 1 NC_017660.1 COG3785 Uncharacterized conserved protein; heat shock protein HspQ 3754389 yccV 12759262 yccV Escherichia coli KO11FL heat shock protein HspQ YP_006165898.1 3754072 D 595495 CDS YP_006165899.1 386702062 12759263 complement(3754434..3754847) 1 NC_017660.1 COG1832 Predicted CoA-binding protein; yccU; hypothetical protein 3754847 12759263 KO11_17900 Escherichia coli KO11FL hypothetical protein YP_006165899.1 3754434 R 595495 CDS YP_006165900.1 386702063 12759264 3755020..3755682 1 NC_017660.1 COG3110 Uncharacterized protein conserved in bacteria; yccT; hypothetical protein 3755682 12759264 KO11_17905 Escherichia coli KO11FL hypothetical protein YP_006165900.1 3755020 D 595495 CDS YP_006165901.1 386702064 12759265 3755778..3756236 1 NC_017660.1 COG1803 Methylglyoxal synthase; methylglyoxal synthase 3756236 mgsA 12759265 mgsA Escherichia coli KO11FL methylglyoxal synthase YP_006165901.1 3755778 D 595495 CDS YP_006165902.1 386702065 12759266 complement(3756268..3758322) 1 NC_017660.1 COG0210 Superfamily I DNA and RNA helicases; DNA helicase IV 3758322 helD 12759266 helD Escherichia coli KO11FL DNA helicase IV YP_006165902.1 3756268 R 595495 CDS YP_006165903.1 386702066 12759267 3758445..3758891 1 NC_017660.1 COG3304 Predicted membrane protein; yccF; hypothetical protein 3758891 12759267 KO11_17920 Escherichia coli KO11FL hypothetical protein YP_006165903.1 3758445 D 595495 CDS YP_006165904.1 386702067 12759268 3758901..3761063 1 NC_017660.1 COG1289 Predicted membrane protein; yccS; hypothetical protein 3761063 12759268 KO11_17925 Escherichia coli KO11FL hypothetical protein YP_006165904.1 3758901 D 595495 CDS YP_006165905.1 386702068 12759269 complement(3761026..3761655) 1 NC_017660.1 COG3070 Regulator of competence-specific genes; sxy; hypothetical protein 3761655 12759269 KO11_17930 Escherichia coli KO11FL hypothetical protein YP_006165905.1 3761026 R 595495 CDS YP_006165906.1 386702069 12759270 3761874..3762383 1 NC_017660.1 COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation; SOS cell division inhibitor 3762383 sulA 12759270 sulA Escherichia coli KO11FL SOS cell division inhibitor YP_006165906.1 3761874 D 595495 CDS YP_006165907.1 386702070 12759271 3762683..3763780 1 NC_017660.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; outer membrane protein A 3763780 ompA 12759271 ompA Escherichia coli KO11FL outer membrane protein A YP_006165907.1 3762683 D 595495 CDS YP_006165908.1 386702071 12759272 complement(3763856..3764308) 1 NC_017660.1 COG3120 Uncharacterized protein conserved in bacteria; Ter macrodomain organizer matS-binding protein 3764308 ycbG 12759272 ycbG Escherichia coli KO11FL Ter macrodomain organizer matS-binding protein YP_006165908.1 3763856 R 595495 CDS YP_006165909.1 386702072 12759273 3764494..3766254 1 NC_017660.1 COG1067 Predicted ATP-dependent protease; Peptidase, S16 (Lon protease) family protein 3766254 ycbZ 12759273 ycbZ Escherichia coli KO11FL Peptidase, S16 (Lon protease) family protein YP_006165909.1 3764494 D 595495 CDS YP_006165910.1 386702073 12759274 3766215..3766841 1 NC_017660.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; 3-hydroxydecanoyl-ACP dehydratase 3766841 fabA 12759274 fabA Escherichia coli KO11FL 3-hydroxydecanoyl-ACP dehydratase YP_006165910.1 3766215 D 595495 CDS YP_006165911.1 386702074 12759275 complement(3766911..3767078) 1 NC_017660.1 COG3130 Ribosome modulation factor; ribosome modulation factor 3767078 rmf 12759275 rmf Escherichia coli KO11FL ribosome modulation factor YP_006165911.1 3766911 R 595495 CDS YP_006165912.1 386702075 12759276 complement(3767334..3767897) 1 NC_017660.1 COG3009 Uncharacterized protein conserved in bacteria; putative lipoprotein 3767897 ymbA 12759276 ymbA Escherichia coli KO11FL putative lipoprotein YP_006165912.1 3767334 R 595495 CDS YP_006165913.1 386702076 12759277 complement(3767894..3769534) 1 NC_017660.1 COG3008 Paraquat-inducible protein B; paraquat-inducible protein B 3769534 pqiB 12759277 pqiB Escherichia coli KO11FL paraquat-inducible protein B YP_006165913.1 3767894 R 595495 CDS YP_006165914.1 386702077 12759278 complement(3769539..3770792) 1 NC_017660.1 COG2995 Uncharacterized paraquat-inducible protein A; paraquat-inducible membrane protein A 3770792 pqiA 12759278 pqiA Escherichia coli KO11FL paraquat-inducible membrane protein A YP_006165914.1 3769539 R 595495 CDS YP_006165915.1 386702078 12759279 complement(3770922..3772829) 1 NC_017660.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATPase 3772829 uup 12759279 uup Escherichia coli KO11FL ABC transporter ATPase YP_006165915.1 3770922 R 595495 CDS YP_006165916.1 386702079 12759280 complement(3772840..3774948) 1 NC_017660.1 COG0116 Predicted N6-adenine-specific DNA methylase; 23S rRNA m(2)G2445 methyltransferase 3774948 rlmL 12759280 rlmL Escherichia coli KO11FL 23S rRNA m(2)G2445 methyltransferase YP_006165916.1 3772840 R 595495 CDS YP_006165917.1 386702080 12759281 3775192..3776301 1 NC_017660.1 COG3217 Uncharacterized Fe-S protein; putative 2Fe-2S cluster-containing protein 3776301 ycbX 12759281 ycbX Escherichia coli KO11FL putative 2Fe-2S cluster-containing protein YP_006165917.1 3775192 D 595495 CDS YP_006165918.1 386702081 12759282 complement(3776298..3776840) 1 NC_017660.1 ycbW; hypothetical protein 3776840 12759282 KO11_17995 Escherichia coli KO11FL hypothetical protein YP_006165918.1 3776298 R 595495 CDS YP_006165919.1 386702082 12759283 complement(3777014..3778024) 1 NC_017660.1 COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 3778024 pyrD 12759283 pyrD Escherichia coli KO11FL dihydroorotate dehydrogenase 2 YP_006165919.1 3777014 R 595495 CDS YP_006165920.1 386702083 12759284 complement(3778135..3778824) 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; pili assembly chaperone 3778824 ycbF 12759284 ycbF Escherichia coli KO11FL pili assembly chaperone YP_006165920.1 3778135 R 595495 CDS YP_006165921.1 386702084 12759285 complement(3778838..3779353) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like protein 3779353 ycbV 12759285 ycbV Escherichia coli KO11FL putative fimbrial-like protein YP_006165921.1 3778838 R 595495 CDS YP_006165922.1 386702085 12759286 complement(3779361..3779903) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like adhesin protein 3779903 ycbU 12759286 ycbU Escherichia coli KO11FL putative fimbrial-like adhesin protein YP_006165922.1 3779361 R 595495 CDS YP_006165923.1 386702086 12759287 complement(3779915..3780985) 1 NC_017660.1 putative fimbrial-like adhesin protein 3780985 elfG 12759287 elfG Escherichia coli KO11FL putative fimbrial-like adhesin protein YP_006165923.1 3779915 R 595495 CDS YP_006165924.1 386702087 12759288 complement(3780976..3783576) 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein 3783576 elfC 12759288 elfC Escherichia coli KO11FL outer membrane usher protein YP_006165924.1 3780976 R 595495 CDS YP_006165925.1 386702088 12759289 complement(3783601..3784302) 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; putative periplasmic pilin chaperone 3784302 elfD 12759289 elfD Escherichia coli KO11FL putative periplasmic pilin chaperone YP_006165925.1 3783601 R 595495 CDS YP_006165926.1 386702089 12759290 complement(3784385..3784927) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like adhesin protein 3784927 elfA 12759290 elfA Escherichia coli KO11FL putative fimbrial-like adhesin protein YP_006165926.1 3784385 R 595495 CDS YP_006165927.1 386702090 12759291 3785283..3785858 1 NC_017660.1 COG0431 Predicted flavoprotein; NAD(P)H-dependent FMN reductase 3785858 ssuE 12759291 ssuE Escherichia coli KO11FL NAD(P)H-dependent FMN reductase YP_006165927.1 3785283 D 595495 CDS YP_006165928.1 386702091 12759292 3785851..3786810 1 NC_017660.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components; alkanesulfonate transporter substrate-binding subunit 3786810 ssuA 12759292 ssuA Escherichia coli KO11FL alkanesulfonate transporter substrate-binding subunit YP_006165928.1 3785851 D 595495 CDS YP_006165929.1 386702092 12759293 3786807..3787952 1 NC_017660.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; alkanesulfonate monooxygenase 3787952 ssuD 12759293 ssuD Escherichia coli KO11FL alkanesulfonate monooxygenase YP_006165929.1 3786807 D 595495 CDS YP_006165930.1 386702093 12759294 3787963..3788754 1 NC_017660.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; alkanesulfonate transporter permease 3788754 ssuC 12759294 ssuC Escherichia coli KO11FL alkanesulfonate transporter permease YP_006165930.1 3787963 D 595495 CDS YP_006165931.1 386702094 12759295 3788751..3789518 1 NC_017660.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; aliphatic sulfonates transport ATP-binding subunit 3789518 ssuB 12759295 ssuB Escherichia coli KO11FL aliphatic sulfonates transport ATP-binding subunit YP_006165931.1 3788751 D 595495 CDS YP_006165932.1 386702095 12759296 complement(3789725..3792337) 1 NC_017660.1 COG0308 Aminopeptidase N; aminopeptidase N 3792337 pepN 12759296 pepN Escherichia coli KO11FL aminopeptidase N YP_006165932.1 3789725 R 595495 CDS YP_006165933.1 386702096 12759297 3792603..3793805 1 NC_017660.1 COG1488 Nicotinic acid phosphoribosyltransferase; nicotinate phosphoribosyltransferase 3793805 pncB 12759297 pncB Escherichia coli KO11FL nicotinate phosphoribosyltransferase YP_006165933.1 3792603 D 595495 CDS YP_006165934.1 386702097 12759298 3793974..3795374 1 NC_017660.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases; asparaginyl-tRNA synthetase 3795374 asnS 12759298 asnS Escherichia coli KO11FL asparaginyl-tRNA synthetase YP_006165934.1 3793974 D 595495 CDS YP_006165935.1 386702098 12759299 3795976..3797064 1 NC_017660.1 COG3203 Outer membrane protein (porin); outer membrane protein F 3797064 ompF 12759299 ompF Escherichia coli KO11FL outer membrane protein F YP_006165935.1 3795976 D 595495 CDS YP_006165936.1 386702099 12759300 complement(3797080..3797250) 1 NC_017660.1 hypothetical protein 3797250 12759300 KO11_18085 Escherichia coli KO11FL hypothetical protein YP_006165936.1 3797080 R 595495 CDS YP_006165937.1 386702100 12759301 3797249..3798439 1 NC_017660.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase 3798439 aspC 12759301 aspC Escherichia coli KO11FL aromatic amino acid aminotransferase YP_006165937.1 3797249 D 595495 CDS YP_006165938.1 386702101 12759302 complement(3798661..3799308) 1 NC_017660.1 COG0491 Zn-dependent hydrolases, including glyoxylases; putative metal-binding enzyme 3799308 ycbL 12759302 ycbL Escherichia coli KO11FL putative metal-binding enzyme YP_006165938.1 3798661 R 595495 CDS YP_006165939.1 386702102 12759303 complement(3799335..3799883) 1 NC_017660.1 COG3108 Uncharacterized protein conserved in bacteria; ycbK; hypothetical protein 3799883 12759303 KO11_18100 Escherichia coli KO11FL hypothetical protein YP_006165939.1 3799335 R 595495 CDS YP_006165940.1 386702103 12759304 complement(3800064..3801911) 1 NC_017660.1 COG2989 Uncharacterized protein conserved in bacteria; murein L,D-transpeptidase 3801911 ycbB 12759304 ycbB Escherichia coli KO11FL murein L,D-transpeptidase YP_006165940.1 3800064 R 595495 CDS YP_006165941.1 386702104 12759305 complement(3802172..3806632) 1 NC_017660.1 COG3096 Uncharacterized protein involved in chromosome partitioning; cell division protein MukB 3806632 mukB 12759305 mukB Escherichia coli KO11FL cell division protein MukB YP_006165941.1 3802172 R 595495 CDS YP_006165942.1 386702105 12759306 complement(3806632..3807336) 1 NC_017660.1 COG3095 Uncharacterized protein involved in chromosome partitioning; condesin subunit E 3807336 mukE 12759306 mukE Escherichia coli KO11FL condesin subunit E YP_006165942.1 3806632 R 595495 CDS YP_006165943.1 386702106 12759307 complement(3807317..3808639) 1 NC_017660.1 COG3006 Uncharacterized protein involved in chromosome partitioning; condesin subunit F 3808639 mukF 12759307 mukF Escherichia coli KO11FL condesin subunit F YP_006165943.1 3807317 R 595495 CDS YP_006165944.1 386702107 12759308 complement(3808636..3809421) 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; putative S-adenosyl-L-methionine-dependent methyltransferase 3809421 smtA 12759308 smtA Escherichia coli KO11FL putative S-adenosyl-L-methionine-dependent methyltransferase YP_006165944.1 3808636 R 595495 CDS YP_006165945.1 386702108 12759309 3809557..3810336 1 NC_017660.1 COG1434 Uncharacterized conserved protein; ybcC; hypothetical protein 3810336 12759309 KO11_18130 Escherichia coli KO11FL hypothetical protein YP_006165945.1 3809557 D 595495 CDS YP_006165946.1 386702109 12759310 complement(3810313..3811206) 1 NC_017660.1 ycbJ; hypothetical protein 3811206 12759310 KO11_18135 Escherichia coli KO11FL hypothetical protein YP_006165946.1 3810313 R 595495 CDS YP_006165947.1 386702110 12759311 complement(3811360..3812106) 1 NC_017660.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase 3812106 kdsB 12759311 kdsB Escherichia coli KO11FL 3-deoxy-manno-octulosonate cytidylyltransferase YP_006165947.1 3811360 R 595495 CDS YP_006165948.1 386702111 12759312 complement(3812103..3812285) 1 NC_017660.1 COG2835 Uncharacterized conserved protein; ycaR; hypothetical protein 3812285 12759312 KO11_18145 Escherichia coli KO11FL hypothetical protein YP_006165948.1 3812103 R 595495 CDS YP_006165949.1 386702112 12759313 complement(3812337..3813569) 1 NC_017660.1 COG3214 Uncharacterized protein conserved in bacteria; ycaQ; hypothetical protein 3813569 12759313 KO11_18150 Escherichia coli KO11FL hypothetical protein YP_006165949.1 3812337 R 595495 CDS YP_006165950.1 386702113 12759314 complement(3813606..3814592) 1 NC_017660.1 COG1663 Tetraacyldisaccharide-1-P 4-kinase; tetraacyldisaccharide 4'-kinase 3814592 lpxK 12759314 lpxK Escherichia coli KO11FL tetraacyldisaccharide 4'-kinase YP_006165950.1 3813606 R 595495 CDS YP_006165951.1 386702114 12759315 complement(3814589..3816337) 1 NC_017660.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; lipid transporter ATP-binding/permease 3816337 msbA 12759315 msbA Escherichia coli KO11FL lipid transporter ATP-binding/permease YP_006165951.1 3814589 R 595495 CDS YP_006165952.1 386702115 12759316 complement(3816374..3818638) 1 NC_017660.1 COG0658 Predicted membrane metal-binding protein; ComEC family competence protein 3818638 ycaI 12759316 ycaI Escherichia coli KO11FL ComEC family competence protein YP_006165952.1 3816374 R 595495 CDS YP_006165953.1 386702116 12759317 complement(3818845..3819129) 1 NC_017660.1 COG0776 Bacterial nucleoid DNA-binding protein; integration host factor subunit beta 3819129 ihfB 12759317 ihfB Escherichia coli KO11FL integration host factor subunit beta YP_006165953.1 3818845 R 595495 CDS YP_006165954.1 386702117 12759318 complement(3819289..3820962) 1 NC_017660.1 COG0539 Ribosomal protein S1; 30S ribosomal protein S1 3820962 rpsA 12759318 rpsA Escherichia coli KO11FL 30S ribosomal protein S1 YP_006165954.1 3819289 R 595495 CDS YP_006165955.1 386702118 12759319 complement(3821073..3821756) 1 NC_017660.1 COG0283 Cytidylate kinase; cytidylate kinase 3821756 cmk 12759319 cmk Escherichia coli KO11FL cytidylate kinase YP_006165955.1 3821073 R 595495 CDS YP_006165956.1 386702119 12759320 complement(3821929..3822693) 1 NC_017660.1 COG0501 Zn-dependent protease with chaperone function; peptidase, M48B family protein 3822693 ycaL 12759320 ycaL Escherichia coli KO11FL peptidase, M48B family protein YP_006165956.1 3821929 R 595495 CDS YP_006165957.1 386702120 12759321 complement(3822862..3824145) 1 NC_017660.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 3824145 aroA 12759321 aroA Escherichia coli KO11FL 3-phosphoshikimate 1-carboxyvinyltransferase YP_006165957.1 3822862 R 595495 CDS YP_006165958.1 386702121 12759322 complement(3824216..3825304) 1 NC_017660.1 COG1932 Phosphoserine aminotransferase; 3-phosphoserine/phosphohydroxythreonine aminotransferase 3825304 serC 12759322 serC Escherichia coli KO11FL 3-phosphoserine/phosphohydroxythreonine aminotransferase YP_006165958.1 3824216 R 595495 CDS YP_006165959.1 386702122 12759323 complement(3825503..3826195) 1 NC_017660.1 COG2323 Predicted membrane protein; ycaP; hypothetical protein 3826195 12759323 KO11_18200 Escherichia coli KO11FL hypothetical protein YP_006165959.1 3825503 R 595495 CDS YP_006165960.1 386702123 12759324 3826325..3828085 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-1; hypothetical protein 3828085 12759324 KO11_18205 Escherichia coli KO11FL hypothetical protein YP_006165960.1 3826325 D 595495 CDS YP_006165961.1 386702124 12759325 3828216..3829424 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3829424 12759325 KO11_18210 Escherichia coli KO11FL IS10 transposase YP_006165961.1 3828216 D 595495 CDS YP_006165962.1 386702125 12759326 3829829..3830686 1 NC_017660.1 COG2116 Formate/nitrite family of transporters; formate transporter 3830686 focA 12759326 focA Escherichia coli KO11FL formate transporter YP_006165962.1 3829829 D 595495 CDS YP_006165963.1 386702126 12759327 3830741..3831169 1 NC_017660.1 COG1882 Pyruvate-formate lyase; formate acetyltransferase 1 3831169 pflB-S1 12759327 pflB-S1 Escherichia coli KO11FL formate acetyltransferase 1 YP_006165963.1 3830741 D 595495 CDS YP_006165964.1 386702127 12759328 3831248..3832954 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3832954 pdc-1 12759328 pdc-1 Escherichia coli KO11FL pyruvate decarboxylase YP_006165964.1 3831248 D 595495 CDS YP_006165965.1 386702128 12759329 3833014..3834165 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3834165 adhB-1 12759329 adhB-1 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006165965.1 3833014 D 595495 CDS YP_006165966.1 386702129 12759330 3834641..3835300 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3835300 cat-1 12759330 cat-1 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006165966.1 3834641 D 595495 CDS YP_006165967.1 386702130 12759331 3835742..3837628 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3837628 pflB-L1 12759331 pflB-L1 Escherichia coli KO11FL pyruvate formate lyase I YP_006165967.1 3835742 D 595495 CDS YP_006165968.1 386702131 12759332 3837820..3838536 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3838536 pflA-1 12759332 pflA-1 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006165968.1 3837820 D 595495 CDS YP_006165969.1 386702132 12759333 3838494..3839165 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-2; hypothetical protein 3839165 12759333 KO11_18250 Escherichia coli KO11FL hypothetical protein YP_006165969.1 3838494 D 595495 CDS YP_006165970.1 386702133 12759334 3839296..3840504 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3840504 12759334 KO11_18255 Escherichia coli KO11FL IS10 transposase YP_006165970.1 3839296 D 595495 CDS YP_006165971.1 386702134 12759335 3840789..3841217 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3841217 pflB-S2 12759335 pflB-S2 Escherichia coli KO11FL pyruvate formate lyase I YP_006165971.1 3840789 D 595495 CDS YP_006165972.1 386702135 12759336 3841296..3843002 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3843002 pdc-2 12759336 pdc-2 Escherichia coli KO11FL pyruvate decarboxylase YP_006165972.1 3841296 D 595495 CDS YP_006165973.1 386702136 12759337 3843062..3844213 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3844213 adhB-2 12759337 adhB-2 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006165973.1 3843062 D 595495 CDS YP_006165974.1 386702137 12759338 3844689..3845348 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3845348 cat-2 12759338 cat-2 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006165974.1 3844689 D 595495 CDS YP_006165975.1 386702138 12759339 3845790..3847676 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3847676 pflB-L2 12759339 pflB-L2 Escherichia coli KO11FL pyruvate formate lyase I YP_006165975.1 3845790 D 595495 CDS YP_006165976.1 386702139 12759340 3847868..3848584 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3848584 pflA-2 12759340 pflA-2 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006165976.1 3847868 D 595495 CDS YP_006165977.1 386702140 12759341 3848542..3849213 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-3; hypothetical protein 3849213 12759341 KO11_18290 Escherichia coli KO11FL hypothetical protein YP_006165977.1 3848542 D 595495 CDS YP_006165978.1 386702141 12759342 3849344..3850552 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3850552 12759342 KO11_18295 Escherichia coli KO11FL IS10 transposase YP_006165978.1 3849344 D 595495 CDS YP_006165979.1 386702142 12759343 3850837..3851265 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3851265 pflB-S3 12759343 pflB-S3 Escherichia coli KO11FL pyruvate formate lyase I YP_006165979.1 3850837 D 595495 CDS YP_006165980.1 386702143 12759344 3851344..3853050 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3853050 pdc-3 12759344 pdc-3 Escherichia coli KO11FL pyruvate decarboxylase YP_006165980.1 3851344 D 595495 CDS YP_006165981.1 386702144 12759345 3853110..3854261 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3854261 adhB-3 12759345 adhB-3 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006165981.1 3853110 D 595495 CDS YP_006165982.1 386702145 12759346 3854737..3855396 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3855396 cat-3 12759346 cat-3 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006165982.1 3854737 D 595495 CDS YP_006165983.1 386702146 12759347 3855838..3857724 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3857724 pflB-L3 12759347 pflB-L3 Escherichia coli KO11FL pyruvate formate lyase I YP_006165983.1 3855838 D 595495 CDS YP_006165984.1 386702147 12759348 3857916..3858632 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3858632 pflA-3 12759348 pflA-3 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006165984.1 3857916 D 595495 CDS YP_006165985.1 386702148 12759349 3858590..3859261 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-4; hypothetical protein 3859261 12759349 KO11_18330 Escherichia coli KO11FL hypothetical protein YP_006165985.1 3858590 D 595495 CDS YP_006165986.1 386702149 12759350 3859392..3860600 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3860600 12759350 KO11_18335 Escherichia coli KO11FL IS10 transposase YP_006165986.1 3859392 D 595495 CDS YP_006165987.1 386702150 12759351 3860885..3861313 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3861313 pflB-S4 12759351 pflB-S4 Escherichia coli KO11FL pyruvate formate lyase I YP_006165987.1 3860885 D 595495 CDS YP_006165988.1 386702151 12759352 3861392..3863098 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3863098 pdc-4 12759352 pdc-4 Escherichia coli KO11FL pyruvate decarboxylase YP_006165988.1 3861392 D 595495 CDS YP_006165989.1 386702152 12759353 3863158..3864309 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3864309 adhB-4 12759353 adhB-4 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006165989.1 3863158 D 595495 CDS YP_006165990.1 386702153 12759354 3864785..3865444 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3865444 cat-4 12759354 cat-4 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006165990.1 3864785 D 595495 CDS YP_006165991.1 386702154 12759355 3865886..3867772 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3867772 pflB-L4 12759355 pflB-L4 Escherichia coli KO11FL pyruvate formate lyase I YP_006165991.1 3865886 D 595495 CDS YP_006165992.1 386702155 12759356 3867964..3868680 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3868680 pflA-4 12759356 pflA-4 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006165992.1 3867964 D 595495 CDS YP_006165993.1 386702156 12759357 3868638..3869309 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-5; hypothetical protein 3869309 12759357 KO11_18370 Escherichia coli KO11FL hypothetical protein YP_006165993.1 3868638 D 595495 CDS YP_006165994.1 386702157 12759358 3869440..3870648 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3870648 12759358 KO11_18375 Escherichia coli KO11FL IS10 transposase YP_006165994.1 3869440 D 595495 CDS YP_006165995.1 386702158 12759359 3870933..3871361 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3871361 pflB-S5 12759359 pflB-S5 Escherichia coli KO11FL pyruvate formate lyase I YP_006165995.1 3870933 D 595495 CDS YP_006165996.1 386702159 12759360 3871440..3873146 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3873146 pdc-5 12759360 pdc-5 Escherichia coli KO11FL pyruvate decarboxylase YP_006165996.1 3871440 D 595495 CDS YP_006165997.1 386702160 12759361 3873206..3874357 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3874357 adhB-5 12759361 adhB-5 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006165997.1 3873206 D 595495 CDS YP_006165998.1 386702161 12759362 3874833..3875492 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3875492 cat-5 12759362 cat-5 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006165998.1 3874833 D 595495 CDS YP_006165999.1 386702162 12759363 3875934..3877820 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3877820 pflB-L5 12759363 pflB-L5 Escherichia coli KO11FL pyruvate formate lyase I YP_006165999.1 3875934 D 595495 CDS YP_006166000.1 386702163 12759364 3878012..3878728 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3878728 pflA-5 12759364 pflA-5 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166000.1 3878012 D 595495 CDS YP_006166001.1 386702164 12759365 3878686..3879357 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-6; hypothetical protein 3879357 12759365 KO11_18410 Escherichia coli KO11FL hypothetical protein YP_006166001.1 3878686 D 595495 CDS YP_006166002.1 386702165 12759366 3879488..3880696 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3880696 12759366 KO11_18415 Escherichia coli KO11FL IS10 transposase YP_006166002.1 3879488 D 595495 CDS YP_006166003.1 386702166 12759367 3880981..3881409 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3881409 pflB-S6 12759367 pflB-S6 Escherichia coli KO11FL pyruvate formate lyase I YP_006166003.1 3880981 D 595495 CDS YP_006166004.1 386702167 12759368 3881488..3883194 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3883194 pdc-6 12759368 pdc-6 Escherichia coli KO11FL pyruvate decarboxylase YP_006166004.1 3881488 D 595495 CDS YP_006166005.1 386702168 12759369 3883254..3884405 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3884405 adhB-6 12759369 adhB-6 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166005.1 3883254 D 595495 CDS YP_006166006.1 386702169 12759370 3884881..3885540 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3885540 cat-6 12759370 cat-6 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166006.1 3884881 D 595495 CDS YP_006166007.1 386702170 12759371 3885982..3887868 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3887868 pflB-L6 12759371 pflB-L6 Escherichia coli KO11FL pyruvate formate lyase I YP_006166007.1 3885982 D 595495 CDS YP_006166008.1 386702171 12759372 3888060..3888776 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3888776 pflA-6 12759372 pflA-6 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166008.1 3888060 D 595495 CDS YP_006166009.1 386702172 12759373 3888734..3889405 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-7; hypothetical protein 3889405 12759373 KO11_18450 Escherichia coli KO11FL hypothetical protein YP_006166009.1 3888734 D 595495 CDS YP_006166010.1 386702173 12759374 3889536..3890744 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3890744 12759374 KO11_18455 Escherichia coli KO11FL IS10 transposase YP_006166010.1 3889536 D 595495 CDS YP_006166011.1 386702174 12759375 3891029..3891457 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3891457 pflB-S7 12759375 pflB-S7 Escherichia coli KO11FL pyruvate formate lyase I YP_006166011.1 3891029 D 595495 CDS YP_006166012.1 386702175 12759376 3891536..3893242 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3893242 pdc-7 12759376 pdc-7 Escherichia coli KO11FL pyruvate decarboxylase YP_006166012.1 3891536 D 595495 CDS YP_006166013.1 386702176 12759377 3893302..3894453 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3894453 adhB-7 12759377 adhB-7 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166013.1 3893302 D 595495 CDS YP_006166014.1 386702177 12759378 3894929..3895588 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3895588 cat-7 12759378 cat-7 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166014.1 3894929 D 595495 CDS YP_006166015.1 386702178 12759379 3896030..3897916 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3897916 pflB-L7 12759379 pflB-L7 Escherichia coli KO11FL pyruvate formate lyase I YP_006166015.1 3896030 D 595495 CDS YP_006166016.1 386702179 12759380 3898108..3898824 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3898824 pflA-7 12759380 pflA-7 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166016.1 3898108 D 595495 CDS YP_006166017.1 386702180 12759381 3898782..3899453 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-8; hypothetical protein 3899453 12759381 KO11_18490 Escherichia coli KO11FL hypothetical protein YP_006166017.1 3898782 D 595495 CDS YP_006166018.1 386702181 12759382 3899584..3900792 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3900792 12759382 KO11_18495 Escherichia coli KO11FL IS10 transposase YP_006166018.1 3899584 D 595495 CDS YP_006166019.1 386702182 12759383 3901077..3901505 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3901505 pflB-S8 12759383 pflB-S8 Escherichia coli KO11FL pyruvate formate lyase I YP_006166019.1 3901077 D 595495 CDS YP_006166020.1 386702183 12759384 3901584..3903290 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3903290 pdc-8 12759384 pdc-8 Escherichia coli KO11FL pyruvate decarboxylase YP_006166020.1 3901584 D 595495 CDS YP_006166021.1 386702184 12759385 3903350..3904501 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3904501 adhB-8 12759385 adhB-8 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166021.1 3903350 D 595495 CDS YP_006166022.1 386702185 12759386 3904977..3905636 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3905636 cat-8 12759386 cat-8 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166022.1 3904977 D 595495 CDS YP_006166023.1 386702186 12759387 3906078..3907964 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3907964 pflB-L8 12759387 pflB-L8 Escherichia coli KO11FL pyruvate formate lyase I YP_006166023.1 3906078 D 595495 CDS YP_006166024.1 386702187 12759388 3908156..3908872 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3908872 pflA-8 12759388 pflA-8 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166024.1 3908156 D 595495 CDS YP_006166025.1 386702188 12759389 3908830..3909501 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-9; hypothetical protein 3909501 12759389 KO11_18530 Escherichia coli KO11FL hypothetical protein YP_006166025.1 3908830 D 595495 CDS YP_006166026.1 386702189 12759390 3909632..3910840 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3910840 12759390 KO11_18535 Escherichia coli KO11FL IS10 transposase YP_006166026.1 3909632 D 595495 CDS YP_006166027.1 386702190 12759391 3911125..3911553 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3911553 pflB-S9 12759391 pflB-S9 Escherichia coli KO11FL pyruvate formate lyase I YP_006166027.1 3911125 D 595495 CDS YP_006166028.1 386702191 12759392 3911632..3913338 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3913338 pdc-9 12759392 pdc-9 Escherichia coli KO11FL pyruvate decarboxylase YP_006166028.1 3911632 D 595495 CDS YP_006166029.1 386702192 12759393 3913398..3914549 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3914549 adhB-9 12759393 adhB-9 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166029.1 3913398 D 595495 CDS YP_006166030.1 386702193 12759394 3915025..3915684 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3915684 cat-9 12759394 cat-9 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166030.1 3915025 D 595495 CDS YP_006166031.1 386702194 12759395 3916126..3918012 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3918012 pflB-L9 12759395 pflB-L9 Escherichia coli KO11FL pyruvate formate lyase I YP_006166031.1 3916126 D 595495 CDS YP_006166032.1 386702195 12759396 3918204..3918920 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3918920 pflA-9 12759396 pflA-9 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166032.1 3918204 D 595495 CDS YP_006166033.1 386702196 12759397 3918878..3919549 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-10; hypothetical protein 3919549 12759397 KO11_18570 Escherichia coli KO11FL hypothetical protein YP_006166033.1 3918878 D 595495 CDS YP_006166034.1 386702197 12759398 3919680..3920888 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3920888 12759398 KO11_18575 Escherichia coli KO11FL IS10 transposase YP_006166034.1 3919680 D 595495 CDS YP_006166035.1 386702198 12759399 3921173..3921601 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3921601 pflB-S10 12759399 pflB-S10 Escherichia coli KO11FL pyruvate formate lyase I YP_006166035.1 3921173 D 595495 CDS YP_006166036.1 386702199 12759400 3921680..3923386 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3923386 pdc-10 12759400 pdc-10 Escherichia coli KO11FL pyruvate decarboxylase YP_006166036.1 3921680 D 595495 CDS YP_006166037.1 386702200 12759401 3923446..3924597 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3924597 adhB-10 12759401 adhB-10 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166037.1 3923446 D 595495 CDS YP_006166038.1 386702201 12759402 3925073..3925732 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3925732 cat-10 12759402 cat-10 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166038.1 3925073 D 595495 CDS YP_006166039.1 386702202 12759403 3926174..3928060 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3928060 pflB-L10 12759403 pflB-L10 Escherichia coli KO11FL pyruvate formate lyase I YP_006166039.1 3926174 D 595495 CDS YP_006166040.1 386702203 12759404 3928252..3928968 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3928968 pflA-10 12759404 pflA-10 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166040.1 3928252 D 595495 CDS YP_006166041.1 386702204 12759405 3928926..3929597 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-11; hypothetical protein 3929597 12759405 KO11_18610 Escherichia coli KO11FL hypothetical protein YP_006166041.1 3928926 D 595495 CDS YP_006166042.1 386702205 12759406 3929728..3930936 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3930936 12759406 KO11_18615 Escherichia coli KO11FL IS10 transposase YP_006166042.1 3929728 D 595495 CDS YP_006166043.1 386702206 12759407 3931221..3931649 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3931649 pflB-S11 12759407 pflB-S11 Escherichia coli KO11FL pyruvate formate lyase I YP_006166043.1 3931221 D 595495 CDS YP_006166044.1 386702207 12759408 3931728..3933434 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3933434 pdc-11 12759408 pdc-11 Escherichia coli KO11FL pyruvate decarboxylase YP_006166044.1 3931728 D 595495 CDS YP_006166045.1 386702208 12759409 3933494..3934645 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3934645 adhB-11 12759409 adhB-11 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166045.1 3933494 D 595495 CDS YP_006166046.1 386702209 12759410 3935121..3935780 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3935780 cat-11 12759410 cat-11 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166046.1 3935121 D 595495 CDS YP_006166047.1 386702210 12759411 3936222..3938108 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3938108 pflB-L11 12759411 pflB-L11 Escherichia coli KO11FL pyruvate formate lyase I YP_006166047.1 3936222 D 595495 CDS YP_006166048.1 386702211 12759412 3938300..3939016 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3939016 pflA-11 12759412 pflA-11 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166048.1 3938300 D 595495 CDS YP_006166049.1 386702212 12759413 3938974..3939645 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-12; hypothetical protein 3939645 12759413 KO11_18650 Escherichia coli KO11FL hypothetical protein YP_006166049.1 3938974 D 595495 CDS YP_006166050.1 386702213 12759414 3939776..3940984 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3940984 12759414 KO11_18655 Escherichia coli KO11FL IS10 transposase YP_006166050.1 3939776 D 595495 CDS YP_006166051.1 386702214 12759415 3941269..3941697 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3941697 pflB-S12 12759415 pflB-S12 Escherichia coli KO11FL pyruvate formate lyase I YP_006166051.1 3941269 D 595495 CDS YP_006166052.1 386702215 12759416 3941776..3943482 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3943482 pdc-12 12759416 pdc-12 Escherichia coli KO11FL pyruvate decarboxylase YP_006166052.1 3941776 D 595495 CDS YP_006166053.1 386702216 12759417 3943542..3944693 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3944693 adhB-12 12759417 adhB-12 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166053.1 3943542 D 595495 CDS YP_006166054.1 386702217 12759418 3945169..3945828 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3945828 cat-12 12759418 cat-12 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166054.1 3945169 D 595495 CDS YP_006166055.1 386702218 12759419 3946270..3948156 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3948156 pflB-L12 12759419 pflB-L12 Escherichia coli KO11FL pyruvate formate lyase I YP_006166055.1 3946270 D 595495 CDS YP_006166056.1 386702219 12759420 3948348..3949064 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3949064 pflA-12 12759420 pflA-12 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166056.1 3948348 D 595495 CDS YP_006166057.1 386702220 12759421 3949022..3949693 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-13; hypothetical protein 3949693 12759421 KO11_18690 Escherichia coli KO11FL hypothetical protein YP_006166057.1 3949022 D 595495 CDS YP_006166058.1 386702221 12759422 3949824..3951032 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3951032 12759422 KO11_18695 Escherichia coli KO11FL IS10 transposase YP_006166058.1 3949824 D 595495 CDS YP_006166059.1 386702222 12759423 3951317..3951745 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3951745 pflB-S13 12759423 pflB-S13 Escherichia coli KO11FL pyruvate formate lyase I YP_006166059.1 3951317 D 595495 CDS YP_006166060.1 386702223 12759424 3951824..3953530 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3953530 pdc-13 12759424 pdc-13 Escherichia coli KO11FL pyruvate decarboxylase YP_006166060.1 3951824 D 595495 CDS YP_006166061.1 386702224 12759425 3953590..3954741 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3954741 adhB-13 12759425 adhB-13 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166061.1 3953590 D 595495 CDS YP_006166062.1 386702225 12759426 3955217..3955876 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3955876 cat-13 12759426 cat-13 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166062.1 3955217 D 595495 CDS YP_006166063.1 386702226 12759427 3956318..3958204 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3958204 pflB-L13 12759427 pflB-L13 Escherichia coli KO11FL pyruvate formate lyase I YP_006166063.1 3956318 D 595495 CDS YP_006166064.1 386702227 12759428 3958396..3959112 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3959112 pflA-13 12759428 pflA-13 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166064.1 3958396 D 595495 CDS YP_006166065.1 386702228 12759429 3959070..3959741 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-14; hypothetical protein 3959741 12759429 KO11_18730 Escherichia coli KO11FL hypothetical protein YP_006166065.1 3959070 D 595495 CDS YP_006166066.1 386702229 12759430 3959872..3961080 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3961080 12759430 KO11_18735 Escherichia coli KO11FL IS10 transposase YP_006166066.1 3959872 D 595495 CDS YP_006166067.1 386702230 12759431 3961365..3961793 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3961793 pflB-S14 12759431 pflB-S14 Escherichia coli KO11FL pyruvate formate lyase I YP_006166067.1 3961365 D 595495 CDS YP_006166068.1 386702231 12759432 3961872..3963578 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3963578 pdc-14 12759432 pdc-14 Escherichia coli KO11FL pyruvate decarboxylase YP_006166068.1 3961872 D 595495 CDS YP_006166069.1 386702232 12759433 3963638..3964789 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3964789 adhB-14 12759433 adhB-14 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166069.1 3963638 D 595495 CDS YP_006166070.1 386702233 12759434 3965265..3965924 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3965924 cat-14 12759434 cat-14 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166070.1 3965265 D 595495 CDS YP_006166071.1 386702234 12759435 3966366..3968252 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3968252 pflB-L14 12759435 pflB-L14 Escherichia coli KO11FL pyruvate formate lyase I YP_006166071.1 3966366 D 595495 CDS YP_006166072.1 386702235 12759436 3968444..3969160 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3969160 pflA-14 12759436 pflA-14 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166072.1 3968444 D 595495 CDS YP_006166073.1 386702236 12759437 3969118..3969789 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-15; hypothetical protein 3969789 12759437 KO11_18770 Escherichia coli KO11FL hypothetical protein YP_006166073.1 3969118 D 595495 CDS YP_006166074.1 386702237 12759438 3969920..3971128 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3971128 12759438 KO11_18775 Escherichia coli KO11FL IS10 transposase YP_006166074.1 3969920 D 595495 CDS YP_006166075.1 386702238 12759439 3971413..3971841 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3971841 pflB-S15 12759439 pflB-S15 Escherichia coli KO11FL pyruvate formate lyase I YP_006166075.1 3971413 D 595495 CDS YP_006166076.1 386702239 12759440 3971920..3973626 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3973626 pdc-15 12759440 pdc-15 Escherichia coli KO11FL pyruvate decarboxylase YP_006166076.1 3971920 D 595495 CDS YP_006166077.1 386702240 12759441 3973686..3974837 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3974837 adhB-15 12759441 adhB-15 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166077.1 3973686 D 595495 CDS YP_006166078.1 386702241 12759442 3975313..3975972 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3975972 cat-15 12759442 cat-15 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166078.1 3975313 D 595495 CDS YP_006166079.1 386702242 12759443 3976414..3978300 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3978300 pflB-L15 12759443 pflB-L15 Escherichia coli KO11FL pyruvate formate lyase I YP_006166079.1 3976414 D 595495 CDS YP_006166080.1 386702243 12759444 3978492..3979208 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3979208 pflA-15 12759444 pflA-15 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166080.1 3978492 D 595495 CDS YP_006166081.1 386702244 12759445 3979166..3979837 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-16; hypothetical protein 3979837 12759445 KO11_18810 Escherichia coli KO11FL hypothetical protein YP_006166081.1 3979166 D 595495 CDS YP_006166082.1 386702245 12759446 3979968..3981176 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3981176 12759446 KO11_18815 Escherichia coli KO11FL IS10 transposase YP_006166082.1 3979968 D 595495 CDS YP_006166083.1 386702246 12759447 3981461..3981889 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3981889 pflB-S16 12759447 pflB-S16 Escherichia coli KO11FL pyruvate formate lyase I YP_006166083.1 3981461 D 595495 CDS YP_006166084.1 386702247 12759448 3981968..3983674 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3983674 pdc-16 12759448 pdc-16 Escherichia coli KO11FL pyruvate decarboxylase YP_006166084.1 3981968 D 595495 CDS YP_006166085.1 386702248 12759449 3983734..3984885 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3984885 adhB-16 12759449 adhB-16 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166085.1 3983734 D 595495 CDS YP_006166086.1 386702249 12759450 3985361..3986020 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3986020 cat-16 12759450 cat-16 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166086.1 3985361 D 595495 CDS YP_006166087.1 386702250 12759451 3986462..3988348 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3988348 pflB-L16 12759451 pflB-L16 Escherichia coli KO11FL pyruvate formate lyase I YP_006166087.1 3986462 D 595495 CDS YP_006166088.1 386702251 12759452 3988540..3989256 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3989256 pflA-16 12759452 pflA-16 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166088.1 3988540 D 595495 CDS YP_006166089.1 386702252 12759453 3989214..3989885 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-17; hypothetical protein 3989885 12759453 KO11_18850 Escherichia coli KO11FL hypothetical protein YP_006166089.1 3989214 D 595495 CDS YP_006166090.1 386702253 12759454 3990016..3991224 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 3991224 12759454 KO11_18855 Escherichia coli KO11FL IS10 transposase YP_006166090.1 3990016 D 595495 CDS YP_006166091.1 386702254 12759455 3991509..3991937 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3991937 pflB-S17 12759455 pflB-S17 Escherichia coli KO11FL pyruvate formate lyase I YP_006166091.1 3991509 D 595495 CDS YP_006166092.1 386702255 12759456 3992016..3993722 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 3993722 pdc-17 12759456 pdc-17 Escherichia coli KO11FL pyruvate decarboxylase YP_006166092.1 3992016 D 595495 CDS YP_006166093.1 386702256 12759457 3993782..3994933 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 3994933 adhB-17 12759457 adhB-17 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166093.1 3993782 D 595495 CDS YP_006166094.1 386702257 12759458 3995409..3996068 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 3996068 cat-17 12759458 cat-17 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166094.1 3995409 D 595495 CDS YP_006166095.1 386702258 12759459 3996510..3998396 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 3998396 pflB-L17 12759459 pflB-L17 Escherichia coli KO11FL pyruvate formate lyase I YP_006166095.1 3996510 D 595495 CDS YP_006166096.1 386702259 12759460 3998588..3999304 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 3999304 pflA-17 12759460 pflA-17 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166096.1 3998588 D 595495 CDS YP_006166097.1 386702260 12759461 3999262..3999933 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-18; hypothetical protein 3999933 12759461 KO11_18890 Escherichia coli KO11FL hypothetical protein YP_006166097.1 3999262 D 595495 CDS YP_006166098.1 386702261 12759462 4000064..4001272 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 4001272 12759462 KO11_18895 Escherichia coli KO11FL IS10 transposase YP_006166098.1 4000064 D 595495 CDS YP_006166099.1 386702262 12759463 4001557..4001985 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 4001985 pflB-S18 12759463 pflB-S18 Escherichia coli KO11FL pyruvate formate lyase I YP_006166099.1 4001557 D 595495 CDS YP_006166100.1 386702263 12759464 4002064..4003770 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 4003770 pdc-18 12759464 pdc-18 Escherichia coli KO11FL pyruvate decarboxylase YP_006166100.1 4002064 D 595495 CDS YP_006166101.1 386702264 12759465 4003830..4004981 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 4004981 adhB-18 12759465 adhB-18 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166101.1 4003830 D 595495 CDS YP_006166102.1 386702265 12759466 4005457..4006116 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 4006116 cat-18 12759466 cat-18 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166102.1 4005457 D 595495 CDS YP_006166103.1 386702266 12759467 4006558..4008444 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 4008444 pflB-L18 12759467 pflB-L18 Escherichia coli KO11FL pyruvate formate lyase I YP_006166103.1 4006558 D 595495 CDS YP_006166104.1 386702267 12759468 4008636..4009352 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 4009352 pflA-18 12759468 pflA-18 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166104.1 4008636 D 595495 CDS YP_006166105.1 386702268 12759469 4009310..4009981 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-19; hypothetical protein 4009981 12759469 KO11_18930 Escherichia coli KO11FL hypothetical protein YP_006166105.1 4009310 D 595495 CDS YP_006166106.1 386702269 12759470 4010112..4011320 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 4011320 12759470 KO11_18935 Escherichia coli KO11FL IS10 transposase YP_006166106.1 4010112 D 595495 CDS YP_006166107.1 386702270 12759471 4011605..4012033 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 4012033 pflB-S19 12759471 pflB-S19 Escherichia coli KO11FL pyruvate formate lyase I YP_006166107.1 4011605 D 595495 CDS YP_006166108.1 386702271 12759472 4012112..4013818 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 4013818 pdc-19 12759472 pdc-19 Escherichia coli KO11FL pyruvate decarboxylase YP_006166108.1 4012112 D 595495 CDS YP_006166109.1 386702272 12759473 4013878..4015029 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 4015029 adhB-19 12759473 adhB-19 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166109.1 4013878 D 595495 CDS YP_006166110.1 386702273 12759474 4015505..4016164 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 4016164 cat-19 12759474 cat-19 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166110.1 4015505 D 595495 CDS YP_006166111.1 386702274 12759475 4016606..4018492 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 4018492 pflB-L19 12759475 pflB-L19 Escherichia coli KO11FL pyruvate formate lyase I YP_006166111.1 4016606 D 595495 CDS YP_006166112.1 386702275 12759476 4018684..4019400 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 4019400 pflA-19 12759476 pflA-19 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166112.1 4018684 D 595495 CDS YP_006166113.1 386702276 12759477 4019358..4020029 1 NC_017660.1 COG1944 Uncharacterized conserved protein; ycaO-20; hypothetical protein 4020029 12759477 KO11_18970 Escherichia coli KO11FL hypothetical protein YP_006166113.1 4019358 D 595495 CDS YP_006166114.1 386702277 12759478 4020160..4021368 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10 transposase 4021368 12759478 KO11_18975 Escherichia coli KO11FL IS10 transposase YP_006166114.1 4020160 D 595495 CDS YP_006166115.1 386702278 12759479 4021653..4022081 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 4022081 pflB-S20 12759479 pflB-S20 Escherichia coli KO11FL pyruvate formate lyase I YP_006166115.1 4021653 D 595495 CDS YP_006166116.1 386702279 12759480 4022160..4023866 1 NC_017660.1 COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; pyruvate decarboxylase 4023866 pdc-20 12759480 pdc-20 Escherichia coli KO11FL pyruvate decarboxylase YP_006166116.1 4022160 D 595495 CDS YP_006166117.1 386702280 12759481 4023926..4025077 1 NC_017660.1 COG1454 Alcohol dehydrogenase, class IV; iron-containing alcohol dehydrogenase 4025077 adhB-20 12759481 adhB-20 Escherichia coli KO11FL iron-containing alcohol dehydrogenase YP_006166117.1 4023926 D 595495 CDS YP_006166118.1 386702281 12759482 4025553..4026212 1 NC_017660.1 COG4845 Chloramphenicol O-acetyltransferase; chloramphenicol acetyltransferase 4026212 cat-20 12759482 cat-20 Escherichia coli KO11FL chloramphenicol acetyltransferase YP_006166118.1 4025553 D 595495 CDS YP_006166119.1 386702282 12759483 4026654..4028540 1 NC_017660.1 COG1882 Pyruvate-formate lyase; pyruvate formate lyase I 4028540 pflB-L20 12759483 pflB-L20 Escherichia coli KO11FL pyruvate formate lyase I YP_006166119.1 4026654 D 595495 CDS YP_006166120.1 386702283 12759484 4028732..4029472 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 4029472 pflA-20 12759484 pflA-20 Escherichia coli KO11FL pyruvate formate lyase-activating enzyme 1 YP_006166120.1 4028732 D 595495 CDS YP_006166121.1 386702284 12759485 complement(4029554..4030144) 1 NC_017660.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); ycaK; hypothetical protein 4030144 12759485 KO11_19010 Escherichia coli KO11FL hypothetical protein YP_006166121.1 4029554 R 595495 CDS YP_006166122.1 386702285 12759486 4030244..4031152 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 4031152 ycaN 12759486 ycaN Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006166122.1 4030244 D 595495 CDS YP_006166123.1 386702286 12759487 complement(4031153..4032583) 1 NC_017660.1 COG0531 Amino acid transporters; putative transporter 4032583 ycaM 12759487 ycaM Escherichia coli KO11FL putative transporter YP_006166123.1 4031153 R 595495 CDS YP_006166124.1 386702287 12759488 complement(4032793..4033941) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative MFS family transporter protein 4033941 ycaD 12759488 ycaD Escherichia coli KO11FL putative MFS family transporter protein YP_006166124.1 4032793 R 595495 CDS YP_006166125.1 386702288 12759489 4034256..4034882 1 NC_017660.1 COG1335 Amidases related to nicotinamidase; ycaC; hypothetical protein 4034882 12759489 KO11_19030 Escherichia coli KO11FL hypothetical protein YP_006166125.1 4034256 D 595495 CDS YP_006166126.1 386702289 12759490 complement(4034918..4035781) 1 NC_017660.1 COG3302 DMSO reductase anchor subunit; dimethyl sulfoxide reductase, anaerobic subunit C 4035781 dmsC 12759490 dmsC Escherichia coli KO11FL dimethyl sulfoxide reductase, anaerobic subunit C YP_006166126.1 4034918 R 595495 CDS YP_006166127.1 386702290 12759491 complement(4035783..4036400) 1 NC_017660.1 COG0437 Fe-S-cluster-containing hydrogenase components 1; Anaerobic dimethyl sulfoxide reductase chain B 4036400 dmsB 12759491 dmsB Escherichia coli KO11FL Anaerobic dimethyl sulfoxide reductase chain B YP_006166127.1 4035783 R 595495 CDS YP_006166128.1 386702291 12759492 complement(4036411..4038855) 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; anaerobic dimethyl sulfoxide reductase subunit A 4038855 dmsA 12759492 dmsA Escherichia coli KO11FL anaerobic dimethyl sulfoxide reductase subunit A YP_006166128.1 4036411 R 595495 CDS YP_006166129.1 386702292 12759493 complement(4039094..4040386) 1 NC_017660.1 COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase 4040386 serS 12759493 serS Escherichia coli KO11FL seryl-tRNA synthetase YP_006166129.1 4039094 R 595495 CDS YP_006166130.1 386702293 12759494 complement(4040477..4041820) 1 NC_017660.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA 4041820 rarA 12759494 rarA Escherichia coli KO11FL recombination factor protein RarA YP_006166130.1 4040477 R 595495 CDS YP_006166131.1 386702294 12759495 complement(4041831..4042442) 1 NC_017660.1 COG2834 Outer membrane lipoprotein-sorting protein; lipoprotein chaperone 4042442 lolA 12759495 lolA Escherichia coli KO11FL lipoprotein chaperone YP_006166131.1 4041831 R 595495 CDS YP_006166132.1 386702295 12759496 complement(4042597..4046664) 1 NC_017660.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; DNA translocase FtsK 4046664 ftsK 12759496 ftsK Escherichia coli KO11FL DNA translocase FtsK YP_006166132.1 4042597 R 595495 CDS YP_006166133.1 386702296 12759497 complement(4046799..4047293) 1 NC_017660.1 COG1522 Transcriptional regulators; leucine-responsive transcriptional regulator 4047293 lrp 12759497 lrp Escherichia coli KO11FL leucine-responsive transcriptional regulator YP_006166133.1 4046799 R 595495 CDS YP_006166134.1 386702297 12759498 4047838..4048803 1 NC_017660.1 COG0492 Thioredoxin reductase; thioredoxin reductase 4048803 trxB 12759498 trxB Escherichia coli KO11FL thioredoxin reductase YP_006166134.1 4047838 D 595495 CDS YP_006166135.1 386702298 12759499 4048926..4050692 1 NC_017660.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components; cysteine/glutathione ABC transporter membrane/ATP-binding protein 4050692 cydD 12759499 cydD Escherichia coli KO11FL cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_006166135.1 4048926 D 595495 CDS YP_006166136.1 386702299 12759500 4050693..4052414 1 NC_017660.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components; cysteine/glutathione ABC transporter membrane/ATP-binding protein 4052414 cydC 12759500 cydC Escherichia coli KO11FL cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_006166136.1 4050693 D 595495 CDS YP_006166137.1 386702300 12759501 4052456..4053160 1 NC_017660.1 COG2360 Leu/Phe-tRNA-protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 4053160 aat 12759501 aat Escherichia coli KO11FL leucyl/phenylalanyl-tRNA--protein transferase YP_006166137.1 4052456 D 595495 CDS YP_006166138.1 386702301 12759502 4053445..4053663 1 NC_017660.1 COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 4053663 infA 12759502 infA Escherichia coli KO11FL translation initiation factor IF-1 YP_006166138.1 4053445 D 595495 CDS YP_006166139.1 386702302 12759504 complement(4054348..4056624) 1 NC_017660.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent Clp protease ATP-binding subunit 4056624 clpA 12759504 clpA Escherichia coli KO11FL ATP-dependent Clp protease ATP-binding subunit YP_006166139.1 4054348 R 595495 CDS YP_006166140.1 386702303 12759505 complement(4056655..4056975) 1 NC_017660.1 COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adaptor protein ClpS 4056975 clpS 12759505 clpS Escherichia coli KO11FL ATP-dependent Clp protease adaptor protein ClpS YP_006166140.1 4056655 R 595495 CDS YP_006166141.1 386702304 12759506 4057298..4057522 1 NC_017660.1 COG1278 Cold shock proteins; stationary phase/starvation inducible regulatory protein CspD 4057522 cspD 12759506 cspD Escherichia coli KO11FL stationary phase/starvation inducible regulatory protein CspD YP_006166141.1 4057298 D 595495 CDS YP_006166142.1 386702305 12759507 complement(4057595..4059541) 1 NC_017660.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component; macrolide transporter ATP-binding /permease 4059541 macB 12759507 macB Escherichia coli KO11FL macrolide transporter ATP-binding /permease YP_006166142.1 4057595 R 595495 CDS YP_006166143.1 386702306 12759508 complement(4059538..4060653) 1 NC_017660.1 COG0845 Membrane-fusion protein; macrolide transporter subunit MacA 4060653 macA 12759508 macA Escherichia coli KO11FL macrolide transporter subunit MacA YP_006166143.1 4059538 R 595495 CDS YP_006166144.1 386702307 12759509 4060768..4061760 1 NC_017660.1 COG2990 Uncharacterized protein conserved in bacteria; ybjX; hypothetical protein 4061760 12759509 KO11_19125 Escherichia coli KO11FL hypothetical protein YP_006166144.1 4060768 D 595495 CDS YP_006166145.1 386702308 12759510 complement(4061757..4063415) 1 NC_017660.1 COG3593 Predicted ATP-dependent endonuclease of the OLD family; putative OLD family ATP-dependent endonuclease 4063415 ybjD 12759510 ybjD Escherichia coli KO11FL putative OLD family ATP-dependent endonuclease YP_006166145.1 4061757 R 595495 CDS YP_006166146.1 386702309 12759511 4063841..4064536 1 NC_017660.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); aquaporin Z 4064536 aqpZ 12759511 aqpZ Escherichia coli KO11FL aquaporin Z YP_006166146.1 4063841 D 595495 CDS YP_006166147.1 386702310 12759512 4065031..4065930 1 NC_017660.1 COG2431 Predicted membrane protein; putative transporter 4065930 ybjE 12759512 ybjE Escherichia coli KO11FL putative transporter YP_006166147.1 4065031 D 595495 CDS YP_006166148.1 386702311 12759513 4066074..4067726 1 NC_017660.1 COG1151 6Fe-6S prismane cluster-containing protein; hybrid cluster protein 4067726 hcp 12759513 hcp Escherichia coli KO11FL hybrid cluster protein YP_006166148.1 4066074 D 595495 CDS YP_006166149.1 386702312 12759514 4067738..4068706 1 NC_017660.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; HCP oxidoreductase 4068706 hcr 12759514 hcr Escherichia coli KO11FL HCP oxidoreductase YP_006166149.1 4067738 D 595495 CDS YP_006166150.1 386702313 12759515 4068839..4070557 1 NC_017660.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; pyruvate dehydrogenase 4070557 poxB 12759515 poxB Escherichia coli KO11FL pyruvate dehydrogenase YP_006166150.1 4068839 D 595495 CDS YP_006166151.1 386702314 12759516 4070594..4071595 1 NC_017660.1 COG2008 Threonine aldolase; L-threonine aldolase 4071595 ltaE 12759516 ltaE Escherichia coli KO11FL L-threonine aldolase YP_006166151.1 4070594 D 595495 CDS YP_006166152.1 386702315 12759517 4071606..4073036 1 NC_017660.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases; ybjT; hypothetical protein 4073036 12759517 KO11_19165 Escherichia coli KO11FL hypothetical protein YP_006166152.1 4071606 D 595495 CDS YP_006166153.1 386702316 12759518 4073099..4074148 1 NC_017660.1 COG0451 Nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase 4074148 ybjS 12759518 ybjS Escherichia coli KO11FL NAD-dependent epimerase/dehydratase YP_006166153.1 4073099 D 595495 CDS YP_006166154.1 386702317 12759519 complement(4074145..4074975) 1 NC_017660.1 COG3023 Negative regulator of beta-lactamase expression; N-acetylmuramoyl-L-alanine amidase AmiD 4074975 amiD 12759519 amiD Escherichia coli KO11FL N-acetylmuramoyl-L-alanine amidase AmiD YP_006166154.1 4074145 R 595495 CDS YP_006166155.1 386702318 12759520 complement(4074972..4075295) 1 NC_017660.1 COG0393 Uncharacterized conserved protein; ybjQ; hypothetical protein 4075295 12759520 KO11_19180 Escherichia coli KO11FL hypothetical protein YP_006166155.1 4074972 R 595495 CDS YP_006166156.1 386702319 12759521 4075421..4075558 1 NC_017660.1 putative lipoprotein 4075558 12759521 KO11_19185 Escherichia coli KO11FL putative lipoprotein YP_006166156.1 4075421 D 595495 CDS YP_006166157.1 386702320 12759522 4075580..4075936 1 NC_017660.1 COG0174 Glutamine synthetase; putative lipoprotein 4075936 ybjP 12759522 ybjP Escherichia coli KO11FL putative lipoprotein YP_006166157.1 4075580 D 595495 CDS YP_006166158.1 386702321 12759523 4076154..4076882 1 NC_017660.1 COG4161 ABC-type arginine transport system, ATPase component; arginine transporter ATP-binding subunit 4076882 artP 12759523 artP Escherichia coli KO11FL arginine transporter ATP-binding subunit YP_006166158.1 4076154 D 595495 CDS YP_006166159.1 386702322 12759524 4076900..4077631 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; putative ABC transporter arginine-binding protein 4077631 artI 12759524 artI Escherichia coli KO11FL putative ABC transporter arginine-binding protein YP_006166159.1 4076900 D 595495 CDS YP_006166160.1 386702323 12759525 4077638..4078354 1 NC_017660.1 COG4215 ABC-type arginine transport system, permease component; arginine transporter permease subunit ArtQ 4078354 artQ 12759525 artQ Escherichia coli KO11FL arginine transporter permease subunit ArtQ YP_006166160.1 4077638 D 595495 CDS YP_006166161.1 386702324 12759526 4078354..4079022 1 NC_017660.1 COG4160 ABC-type arginine/histidine transport system, permease component; arginine transporter permease subunit ArtM 4079022 artM 12759526 artM Escherichia coli KO11FL arginine transporter permease subunit ArtM YP_006166161.1 4078354 D 595495 CDS YP_006166162.1 386702325 12759527 4079314..4080045 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; arginine/ornithine ABC transporter substrate-binding protein 4080045 artJ 12759527 artJ Escherichia coli KO11FL arginine/ornithine ABC transporter substrate-binding protein YP_006166162.1 4079314 D 595495 CDS YP_006166163.1 386702326 12759528 complement(4080220..4081347) 1 NC_017660.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; 23S rRNA methyluridine methyltransferase 4081347 rumB 12759528 rumB Escherichia coli KO11FL 23S rRNA methyluridine methyltransferase YP_006166163.1 4080220 R 595495 CDS YP_006166164.1 386702327 12759529 complement(4081388..4081876) 1 NC_017660.1 putative inner membrane protein 4081876 ybjO 12759529 ybjO Escherichia coli KO11FL putative inner membrane protein YP_006166164.1 4081388 R 595495 CDS YP_006166165.1 386702328 12759530 complement(4081936..4082781) 1 NC_017660.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II; putrescine ABC transporter membrane protein 4082781 potI 12759530 potI Escherichia coli KO11FL putrescine ABC transporter membrane protein YP_006166165.1 4081936 R 595495 CDS YP_006166166.1 386702329 12759531 complement(4082778..4083731) 1 NC_017660.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I; putrescine ABC transporter membrane protein 4083731 potH 12759531 potH Escherichia coli KO11FL putrescine ABC transporter membrane protein YP_006166166.1 4082778 R 595495 CDS YP_006166167.1 386702330 12759532 complement(4083741..4084874) 1 NC_017660.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; putrescine ABC transporter ATP-binding protein 4084874 potG 12759532 potG Escherichia coli KO11FL putrescine ABC transporter ATP-binding protein YP_006166167.1 4083741 R 595495 CDS YP_006166168.1 386702331 12759533 complement(4084969..4086081) 1 NC_017660.1 COG0687 Spermidine/putrescine-binding periplasmic protein; putrescine ABC transporter periplasmic-binding protein 4086081 potF 12759533 potF Escherichia coli KO11FL putrescine ABC transporter periplasmic-binding protein YP_006166168.1 4084969 R 595495 CDS YP_006166169.1 386702332 12759534 complement(4086432..4086908) 1 NC_017660.1 putative sensory transduction regulator 4086908 ybjN 12759534 ybjN Escherichia coli KO11FL putative sensory transduction regulator YP_006166169.1 4086432 R 595495 CDS YP_006166170.1 386702333 12759535 complement(4086996..4087898) 1 NC_017660.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); ribosomal protein S6 modification protein 4087898 rimK 12759535 rimK Escherichia coli KO11FL ribosomal protein S6 modification protein YP_006166170.1 4086996 R 595495 CDS YP_006166171.1 386702334 12759536 complement(4087959..4088681) 1 NC_017660.1 COG0778 Nitroreductase; nitroreductase A 4088681 nfsA 12759536 nfsA Escherichia coli KO11FL nitroreductase A YP_006166171.1 4087959 R 595495 CDS YP_006166172.1 386702335 12759537 complement(4088665..4088952) 1 NC_017660.1 ybjC; hypothetical protein 4088952 12759537 KO11_19265 Escherichia coli KO11FL hypothetical protein YP_006166172.1 4088665 R 595495 CDS YP_006166173.1 386702336 12759538 4089112..4089369 1 NC_017660.1 COG0695 Glutaredoxin and related proteins; glutaredoxin 4089369 grxA 12759538 grxA Escherichia coli KO11FL glutaredoxin YP_006166173.1 4089112 D 595495 CDS YP_006166174.1 386702337 12759539 complement(4089399..4089776) 1 NC_017660.1 Inner membrane protein ybjM 4089776 ybjM 12759539 ybjM Escherichia coli KO11FL Inner membrane protein ybjM YP_006166174.1 4089399 R 595495 CDS YP_006166175.1 386702338 12759540 4090046..4091731 1 NC_017660.1 COG2985 Predicted permease; putative transporter 4091731 ybjL 12759540 ybjL Escherichia coli KO11FL putative transporter YP_006166175.1 4090046 D 595495 CDS YP_006166176.1 386702339 12759541 complement(4091967..4092218) 1 NC_017660.1 prophage P2 OGR-like protein 4092218 12759541 KO11_19285 Escherichia coli KO11FL prophage P2 OGR-like protein YP_006166176.1 4091967 R 595495 CDS YP_006166177.1 386702340 12759542 complement(4092276..4093376) 1 NC_017660.1 COG3500 Phage protein D; Late control gene D protein (GpD) 4093376 12759542 KO11_19290 Escherichia coli KO11FL Late control gene D protein (GpD) YP_006166177.1 4092276 R 595495 CDS YP_006166178.1 386702341 12760191 complement(4093373..4093858) 1 NC_017660.1 COG3499 Phage protein U; bacteriophage tail protein GpU 4093858 12760191 KO11_19295 Escherichia coli KO11FL bacteriophage tail protein GpU YP_006166178.1 4093373 R 595495 CDS YP_006166179.1 386702342 12760192 complement(4093855..4096932) 1 NC_017660.1 COG5283 Phage-related tail protein; TP901 family phage tail tape measure protein 4096932 12760192 KO11_19300 Escherichia coli KO11FL TP901 family phage tail tape measure protein YP_006166179.1 4093855 R 595495 CDS YP_006166180.1 386702343 12760193 complement(4096925..4097044) 1 NC_017660.1 putative phage tail protein 4097044 12760193 KO11_19305 Escherichia coli KO11FL putative phage tail protein YP_006166180.1 4096925 R 595495 CDS YP_006166181.1 386702344 12760194 complement(4097059..4097361) 1 NC_017660.1 putative phage tail protein E 4097361 12760194 KO11_19310 Escherichia coli KO11FL putative phage tail protein E YP_006166181.1 4097059 R 595495 CDS YP_006166182.1 386702345 12760195 complement(4097416..4097931) 1 NC_017660.1 COG3498 Phage tail tube protein FII; Major tail tube protein (Protein FII) 4097931 12760195 KO11_19315 Escherichia coli KO11FL Major tail tube protein (Protein FII) YP_006166182.1 4097416 R 595495 CDS YP_006166183.1 386702346 12760196 complement(4097941..4099113) 1 NC_017660.1 COG3497 Phage tail sheath protein FI; Major tail sheath protein (Protein FI) 4099113 12760196 KO11_19320 Escherichia coli KO11FL Major tail sheath protein (Protein FI) YP_006166183.1 4097941 R 595495 CDS YP_006166184.1 386702347 12760197 complement(4099256..4099822) 1 NC_017660.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs; putative DNA invertase 4099822 12760197 KO11_19325 Escherichia coli KO11FL putative DNA invertase YP_006166184.1 4099256 R 595495 CDS YP_006166185.1 386702348 12760198 4099850..4100356 1 NC_017660.1 putative tail fiber protein 4100356 12760198 KO11_19330 Escherichia coli KO11FL putative tail fiber protein YP_006166185.1 4099850 D 595495 CDS YP_006166186.1 386702349 12760199 4100356..4100961 1 NC_017660.1 putative tail fiber assembly 4100961 12760199 KO11_19335 Escherichia coli KO11FL putative tail fiber assembly YP_006166186.1 4100356 D 595495 CDS YP_006166187.1 386702350 12760200 4101178..4101489 1 NC_017660.1 COG2963 Transposase and inactivated derivatives; putative IS602 transposase OrfA 4101489 12760200 KO11_19340 Escherichia coli KO11FL putative IS602 transposase OrfA YP_006166187.1 4101178 D 595495 CDS YP_006166188.1 386702351 12760201 4101609..4101977 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; putative IS602 transposase OrfB 4101977 12760201 KO11_19345 Escherichia coli KO11FL putative IS602 transposase OrfB YP_006166188.1 4101609 D 595495 CDS YP_006166189.1 386702352 12760202 complement(4102374..4103765) 1 NC_017660.1 COG5301 Phage-related tail fibre protein; putative variable tail fiber protein 4103765 12760202 KO11_19355 Escherichia coli KO11FL putative variable tail fiber protein YP_006166189.1 4102374 R 595495 CDS YP_006166190.1 386702353 12760203 complement(4103762..4104367) 1 NC_017660.1 COG4385 Bacteriophage P2-related tail formation protein; phage tail protein I 4104367 12760203 KO11_19360 Escherichia coli KO11FL phage tail protein I YP_006166190.1 4103762 R 595495 CDS YP_006166191.1 386702354 12760204 complement(4104360..4105268) 1 NC_017660.1 COG3948 Phage-related baseplate assembly protein; phage baseplate assembly protein 4105268 12760204 KO11_19365 Escherichia coli KO11FL phage baseplate assembly protein YP_006166191.1 4104360 R 595495 CDS YP_006166192.1 386702355 12760205 complement(4105255..4105614) 1 NC_017660.1 COG3628 Phage baseplate assembly protein W; Baseplate assembly protein W (GpW) 4105614 12760205 KO11_19370 Escherichia coli KO11FL Baseplate assembly protein W (GpW) YP_006166192.1 4105255 R 595495 CDS YP_006166193.1 386702356 12760206 complement(4105611..4106189) 1 NC_017660.1 COG4540 Phage P2 baseplate assembly protein gpV; hypothetical protein 4106189 12760206 KO11_19375 Escherichia coli KO11FL hypothetical protein YP_006166193.1 4105611 R 595495 CDS YP_006166194.1 386702357 12760207 4106312..4107181 1 NC_017660.1 hypothetical protein 4107181 12760207 KO11_19380 Escherichia coli KO11FL hypothetical protein YP_006166194.1 4106312 D 595495 CDS YP_006166195.1 386702358 12760208 complement(4107237..4107683) 1 NC_017660.1 putative phage tail protein 4107683 12760208 KO11_19385 Escherichia coli KO11FL putative phage tail protein YP_006166195.1 4107237 R 595495 CDS YP_006166196.1 386702359 12760209 complement(4107676..4108107) 1 NC_017660.1 Tail completion protein R (GpR) 4108107 12760209 KO11_19390 Escherichia coli KO11FL Tail completion protein R (GpR) YP_006166196.1 4107676 R 595495 CDS YP_006166197.1 386702360 12760210 complement(4108070..4108243) 1 NC_017660.1 Fels-2 prophage protein 4108243 12760210 KO11_19395 Escherichia coli KO11FL Fels-2 prophage protein YP_006166197.1 4108070 R 595495 CDS YP_006166198.1 386702361 12760211 complement(4108203..4108631) 1 NC_017660.1 putative Regulatory protein 4108631 12760211 KO11_19400 Escherichia coli KO11FL putative Regulatory protein YP_006166198.1 4108203 R 595495 CDS YP_006166199.1 386702362 12760212 complement(4108628..4109005) 1 NC_017660.1 hypothetical protein 4109005 12760212 KO11_19405 Escherichia coli KO11FL hypothetical protein YP_006166199.1 4108628 R 595495 CDS YP_006166200.1 386702363 12760213 complement(4109007..4109519) 1 NC_017660.1 COG3772 Phage-related lysozyme (muraminidase); putative lysozyme protein R of prophage 4109519 12760213 KO11_19410 Escherichia coli KO11FL putative lysozyme protein R of prophage YP_006166200.1 4109007 R 595495 CDS YP_006166201.1 386702364 12760214 complement(4109500..4109715) 1 NC_017660.1 putative secretory protein 4109715 12760214 KO11_19415 Escherichia coli KO11FL putative secretory protein YP_006166201.1 4109500 R 595495 CDS YP_006166202.1 386702365 12760215 complement(4109719..4109922) 1 NC_017660.1 COG5004 P2-like prophage tail protein X; Phage tail protein X (GpX) 4109922 12760215 KO11_19420 Escherichia coli KO11FL Phage tail protein X (GpX) YP_006166202.1 4109719 R 595495 CDS YP_006166203.1 386702366 12760216 complement(4109922..4110386) 1 NC_017660.1 Head completion/stabilization protein (GpL) 4110386 12760216 KO11_19425 Escherichia coli KO11FL Head completion/stabilization protein (GpL) YP_006166203.1 4109922 R 595495 CDS YP_006166204.1 386702367 12760217 complement(4110482..4111132) 1 NC_017660.1 terminase, endonuclease subunit 4111132 12760217 KO11_19430 Escherichia coli KO11FL terminase, endonuclease subunit YP_006166204.1 4110482 R 595495 CDS YP_006166205.1 386702368 12760218 complement(4111136..4112194) 1 NC_017660.1 minor capsid protein H1 and H2, major capsid protein N* 4112194 12760218 KO11_19435 Escherichia coli KO11FL minor capsid protein H1 and H2, major capsid protein N* YP_006166205.1 4111136 R 595495 CDS YP_006166206.1 386702369 12760219 complement(4112211..4113044) 1 NC_017660.1 Presumed capsid scaffolding protein (GpO) 4113044 12760219 KO11_19440 Escherichia coli KO11FL Presumed capsid scaffolding protein (GpO) YP_006166206.1 4112211 R 595495 CDS YP_006166207.1 386702370 12760220 4113043..4113177 1 NC_017660.1 hypothetical protein 4113177 12760220 KO11_19445 Escherichia coli KO11FL hypothetical protein YP_006166207.1 4113043 D 595495 CDS YP_006166208.1 386702371 12760221 4113187..4114953 1 NC_017660.1 Terminase, ATPase subunit (GpP) 4114953 12760221 KO11_19450 Escherichia coli KO11FL Terminase, ATPase subunit (GpP) YP_006166208.1 4113187 D 595495 CDS YP_006166209.1 386702372 12760222 4114953..4115978 1 NC_017660.1 COG5518 Bacteriophage capsid portal protein; phage portal protein, PBSX family 4115978 12760222 KO11_19455 Escherichia coli KO11FL phage portal protein, PBSX family YP_006166209.1 4114953 D 595495 CDS YP_006166210.1 386702373 12760223 complement(4116019..4117800) 1 NC_017660.1 COG1479 Uncharacterized conserved protein; hypothetical protein 4117800 12760223 KO11_19460 Escherichia coli KO11FL hypothetical protein YP_006166210.1 4116019 R 595495 CDS YP_006166211.1 386702374 12760224 4118333..4118668 1 NC_017660.1 hypothetical protein 4118668 12760224 KO11_19465 Escherichia coli KO11FL hypothetical protein YP_006166211.1 4118333 D 595495 CDS YP_006166212.1 386702375 12760225 complement(4118861..4119094) 1 NC_017660.1 COG1158 Transcription termination factor; Prophage protein 4119094 12760225 KO11_19470 Escherichia coli KO11FL Prophage protein YP_006166212.1 4118861 R 595495 CDS YP_006166213.1 386702376 12760226 complement(4119105..4119293) 1 NC_017660.1 hypothetical protein 4119293 12760226 KO11_19475 Escherichia coli KO11FL hypothetical protein YP_006166213.1 4119105 R 595495 CDS YP_006166214.1 386702377 12760227 complement(4119446..4121860) 1 NC_017660.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; putative replication protein for prophage 4121860 12760227 KO11_19480 Escherichia coli KO11FL putative replication protein for prophage YP_006166214.1 4119446 R 595495 CDS YP_006166215.1 386702378 12760228 complement(4121857..4122714) 1 NC_017660.1 COG0338 Site-specific DNA methylase; DNA adenine methylase 4122714 12760228 KO11_19485 Escherichia coli KO11FL DNA adenine methylase YP_006166215.1 4121857 R 595495 CDS YP_006166216.1 386702379 12760229 complement(4122711..4122938) 1 NC_017660.1 COG1734 DnaK suppressor protein; putative DksA/TraR protein family with a zinc finger 4122938 12760229 KO11_19490 Escherichia coli KO11FL putative DksA/TraR protein family with a zinc finger YP_006166216.1 4122711 R 595495 CDS YP_006166217.1 386702380 12760230 complement(4122938..4123171) 1 NC_017660.1 hypothetical protein 4123171 12760230 KO11_19495 Escherichia coli KO11FL hypothetical protein YP_006166217.1 4122938 R 595495 CDS YP_006166218.1 386702381 12760231 complement(4123239..4123580) 1 NC_017660.1 hypothetical protein 4123580 12760231 KO11_19500 Escherichia coli KO11FL hypothetical protein YP_006166218.1 4123239 R 595495 CDS YP_006166219.1 386702382 12760232 4123662..4123910 1 NC_017660.1 hypothetical protein 4123910 12760232 KO11_19505 Escherichia coli KO11FL hypothetical protein YP_006166219.1 4123662 D 595495 CDS YP_006166220.1 386702383 12760233 complement(4123996..4124292) 1 NC_017660.1 hypothetical protein 4124292 12760233 KO11_19510 Escherichia coli KO11FL hypothetical protein YP_006166220.1 4123996 R 595495 CDS YP_006166221.1 386702384 12760234 complement(4124300..4124809) 1 NC_017660.1 putative regulatory protein 4124809 12760234 KO11_19515 Escherichia coli KO11FL putative regulatory protein YP_006166221.1 4124300 R 595495 CDS YP_006166222.1 386702385 12760235 complement(4124875..4125078) 1 NC_017660.1 putative regulator for prophage 4125078 12760235 KO11_19520 Escherichia coli KO11FL putative regulator for prophage YP_006166222.1 4124875 R 595495 CDS YP_006166223.1 386702386 12760236 4125138..4125788 1 NC_017660.1 hypothetical protein 4125788 12760236 KO11_19525 Escherichia coli KO11FL hypothetical protein YP_006166223.1 4125138 D 595495 CDS YP_006166224.1 386702387 12760237 4125789..4127240 1 NC_017660.1 COG4928 Predicted P-loop ATPase; hypothetical protein 4127240 12760237 KO11_19530 Escherichia coli KO11FL hypothetical protein YP_006166224.1 4125789 D 595495 CDS YP_006166225.1 386702388 12760238 4127321..4128373 1 NC_017660.1 COG0582 Integrase; integrase family protein 4128373 12760238 KO11_19535 Escherichia coli KO11FL integrase family protein YP_006166225.1 4127321 D 595495 CDS YP_006166226.1 386702389 12760239 complement(4128478..4129014) 1 NC_017660.1 COG3226 Uncharacterized protein conserved in bacteria; putative DEOR-type transcriptional regulator 4129014 ybjK 12760239 ybjK Escherichia coli KO11FL putative DEOR-type transcriptional regulator YP_006166226.1 4128478 R 595495 CDS YP_006166227.1 386702390 12760240 4129098..4130306 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 4130306 ybjJ 12760240 ybjJ Escherichia coli KO11FL putative transporter YP_006166227.1 4129098 D 595495 CDS YP_006166228.1 386702391 12760241 4130306..4131121 1 NC_017660.1 COG0561 Predicted hydrolases of the HAD superfamily; ybjI; hypothetical protein 4131121 12760241 KO11_19550 Escherichia coli KO11FL hypothetical protein YP_006166228.1 4130306 D 595495 CDS YP_006166229.1 386702392 12760242 4131213..4131491 1 NC_017660.1 ybjH; hypothetical protein 4131491 12760242 KO11_19555 Escherichia coli KO11FL hypothetical protein YP_006166229.1 4131213 D 595495 CDS YP_006166230.1 386702393 12760243 complement(4131532..4132764) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; multidrug efflux system translocase MdfA 4132764 mdfA 12760243 mdfA Escherichia coli KO11FL multidrug efflux system translocase MdfA YP_006166230.1 4131532 R 595495 CDS YP_006166231.1 386702394 12760244 4133049..4133645 1 NC_017660.1 COG0671 Membrane-associated phospholipid phosphatase; undecaprenyl pyrophosphate phosphatase 4133645 ybjG 12760244 ybjG Escherichia coli KO11FL undecaprenyl pyrophosphate phosphatase YP_006166231.1 4133049 D 595495 CDS YP_006166232.1 386702395 12760245 4133703..4134461 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor DeoR 4134461 deoR 12760245 deoR Escherichia coli KO11FL DNA-binding transcriptional repressor DeoR YP_006166232.1 4133703 D 595495 CDS YP_006166233.1 386702396 12760246 complement(4134508..4135710) 1 NC_017660.1 COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 4135710 dacC 12760246 dacC Escherichia coli KO11FL D-alanyl-D-alanine carboxypeptidase YP_006166233.1 4134508 R 595495 CDS YP_006166234.1 386702397 12760247 4135957..4136583 1 NC_017660.1 COG0625 Glutathione S-transferase; putative transferase 4136583 yliJ 12760247 yliJ Escherichia coli KO11FL putative transferase YP_006166234.1 4135957 D 595495 CDS YP_006166235.1 386702398 12760248 complement(4136580..4137695) 1 NC_017660.1 COG2133 Glucose/sorbosone dehydrogenases; putative dehydrogenase 4137695 yliI 12760248 yliI Escherichia coli KO11FL putative dehydrogenase YP_006166235.1 4136580 R 595495 CDS YP_006166236.1 386702399 12760249 complement(4137806..4138189) 1 NC_017660.1 biofilm formation regulatory protein BssR 4138189 bssR 12760249 bssR Escherichia coli KO11FL biofilm formation regulatory protein BssR YP_006166236.1 4137806 R 595495 CDS YP_006166237.1 386702400 12760250 4138402..4139727 1 NC_017660.1 COG0621 2-methylthioadenine synthetase; 30S ribosomal protein S12 methylthiotransferase 4139727 rimO 12760250 rimO Escherichia coli KO11FL 30S ribosomal protein S12 methylthiotransferase YP_006166237.1 4138402 D 595495 CDS YP_006166238.1 386702401 12760251 complement(4139774..4141102) 1 NC_017660.1 COG2199 FOG: GGDEF domain; putative diguanylate cyclase 4141102 yliF 12760251 yliF Escherichia coli KO11FL putative diguanylate cyclase YP_006166238.1 4139774 R 595495 CDS YP_006166239.1 386702402 12760252 complement(4141110..4143458) 1 NC_017660.1 COG2200 FOG: EAL domain; yliE; hypothetical protein 4143458 12760252 KO11_19605 Escherichia coli KO11FL hypothetical protein YP_006166239.1 4141110 R 595495 CDS YP_006166240.1 386702403 12760253 complement(4143636..4144547) 1 NC_017660.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; glutathione ABC transporter permease GsiD 4144547 gsiD 12760253 gsiD Escherichia coli KO11FL glutathione ABC transporter permease GsiD YP_006166240.1 4143636 R 595495 CDS YP_006166241.1 386702404 12760254 complement(4144550..4145470) 1 NC_017660.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; glutathione ABC transporter permease GsiC 4145470 gsiC 12760254 gsiC Escherichia coli KO11FL glutathione ABC transporter permease GsiC YP_006166241.1 4144550 R 595495 CDS YP_006166242.1 386702405 12760255 complement(4145488..4147026) 1 NC_017660.1 COG0747 ABC-type dipeptide transport system, periplasmic component; glutathione ABC transporter substrate-binding protein GsiB 4147026 gsiB 12760255 gsiB Escherichia coli KO11FL glutathione ABC transporter substrate-binding protein GsiB YP_006166242.1 4145488 R 595495 CDS YP_006166243.1 386702406 12760256 complement(4147046..4148917) 1 NC_017660.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; glutathione transporter ATP-binding protein 4148917 gsiA 12760256 gsiA Escherichia coli KO11FL glutathione transporter ATP-binding protein YP_006166243.1 4147046 R 595495 CDS YP_006166244.1 386702407 12760257 complement(4148904..4149869) 1 NC_017660.1 COG1446 Asparaginase; isoaspartyl peptidase 4149869 iaaA 12760257 iaaA Escherichia coli KO11FL isoaspartyl peptidase YP_006166244.1 4148904 R 595495 CDS YP_006166245.1 386702408 12760258 4150073..4151308 1 NC_017660.1 COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein MoeA 4151308 moeA 12760258 moeA Escherichia coli KO11FL molybdopterin biosynthesis protein MoeA YP_006166245.1 4150073 D 595495 CDS YP_006166246.1 386702409 12760259 4151308..4152057 1 NC_017660.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; molybdopterin biosynthesis protein MoeB 4152057 moeB 12760259 moeB Escherichia coli KO11FL molybdopterin biosynthesis protein MoeB YP_006166246.1 4151308 D 595495 CDS YP_006166247.1 386702410 12760260 complement(4152133..4152795) 1 NC_017660.1 COG0176 Transaldolase; fructose-6-phosphate aldolase 4152795 fsaA 12760260 fsaA Escherichia coli KO11FL fructose-6-phosphate aldolase YP_006166247.1 4152133 R 595495 CDS YP_006166248.1 386702411 12760261 4152926..4153825 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; putative pyruvate formate-lyase 3 activating protein 4153825 ybiY 12760261 ybiY Escherichia coli KO11FL putative pyruvate formate-lyase 3 activating protein YP_006166248.1 4152926 D 595495 CDS YP_006166249.1 386702412 12760262 4153831..4156263 1 NC_017660.1 COG1882 Pyruvate-formate lyase; putative pyruvate formate lyase 4156263 ybiW 12760262 ybiW Escherichia coli KO11FL putative pyruvate formate lyase YP_006166249.1 4153831 D 595495 CDS YP_006166250.1 386702413 12760263 4156409..4157224 1 NC_017660.1 COG0561 Predicted hydrolases of the HAD superfamily; putative hydrolase 4157224 ybiV 12760263 ybiV Escherichia coli KO11FL putative hydrolase YP_006166250.1 4156409 D 595495 CDS YP_006166251.1 386702414 12760264 4157376..4158641 1 NC_017660.1 ybiU; hypothetical protein 4158641 12760264 KO11_19665 Escherichia coli KO11FL hypothetical protein YP_006166251.1 4157376 D 595495 CDS YP_006166252.1 386702415 12760265 complement(4158897..4159877) 1 NC_017660.1 COG3547 Transposase and inactivated derivatives; putative IS621 transposase 4159877 12760265 KO11_19670 Escherichia coli KO11FL putative IS621 transposase YP_006166252.1 4158897 R 595495 CDS YP_006166253.1 386702416 12760266 complement(4160156..4161748) 1 NC_017660.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 4161748 ybiT 12760266 ybiT Escherichia coli KO11FL ABC transporter ATP-binding protein YP_006166253.1 4160156 R 595495 CDS YP_006166254.1 386702417 12760267 4161967..4162887 1 NC_017660.1 COG1376 Uncharacterized protein conserved in bacteria; L,D-transpeptidase 4162887 ybiS 12760267 ybiS Escherichia coli KO11FL L,D-transpeptidase YP_006166254.1 4161967 D 595495 CDS YP_006166255.1 386702418 12760268 complement(4162946..4164064) 1 NC_017660.1 COG0471 Di- and tricarboxylate transporters; putative transporter 4164064 ybiR 12760268 ybiR Escherichia coli KO11FL putative transporter YP_006166255.1 4162946 R 595495 CDS YP_006166256.1 386702419 12760269 complement(4164061..4164528) 1 NC_017660.1 COG1321 Mn-dependent transcriptional regulator; manganese transport regulator MntR 4164528 mntR 12760269 mntR Escherichia coli KO11FL manganese transport regulator MntR YP_006166256.1 4164061 R 595495 CDS YP_006166257.1 386702420 12760270 4164714..4164842 1 NC_017660.1 hypothetical protein 4164842 12760270 KO11_19695 Escherichia coli KO11FL hypothetical protein YP_006166257.1 4164714 D 595495 CDS YP_006166258.1 386702421 12760271 4165114..4166697 1 NC_017660.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase; putative hydrolase, inner membrane 4166697 ybiP 12760271 ybiP Escherichia coli KO11FL putative hydrolase, inner membrane YP_006166258.1 4165114 D 595495 CDS YP_006166259.1 386702422 12760272 complement(4166746..4167261) 1 NC_017660.1 COG3637 Opacity protein and related surface antigens; outer membrane protein X 4167261 ompX 12760272 ompX Escherichia coli KO11FL outer membrane protein X YP_006166259.1 4166746 R 595495 CDS YP_006166260.1 386702423 12760273 4167614..4168501 1 NC_017660.1 COG5006 Predicted permease, DMT superfamily; threonine and homoserine efflux system 4168501 rhtA 12760273 rhtA Escherichia coli KO11FL threonine and homoserine efflux system YP_006166260.1 4167614 D 595495 CDS YP_006166261.1 386702424 12760274 4168800..4169303 1 NC_017660.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); DNA starvation/stationary phase protection protein Dps 4169303 dps 12760274 dps Escherichia coli KO11FL DNA starvation/stationary phase protection protein Dps YP_006166261.1 4168800 D 595495 CDS YP_006166262.1 386702425 12760275 4169707..4170453 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine ABC transporter periplasmic protein 4170453 glnH 12760275 glnH Escherichia coli KO11FL glutamine ABC transporter periplasmic protein YP_006166262.1 4169707 D 595495 CDS YP_006166263.1 386702426 12760276 4170592..4171251 1 NC_017660.1 COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter permease 4171251 glnP 12760276 glnP Escherichia coli KO11FL glutamine ABC transporter permease YP_006166263.1 4170592 D 595495 CDS YP_006166264.1 386702427 12760277 4171248..4171970 1 NC_017660.1 COG1126 ABC-type polar amino acid transport system, ATPase component; glutamine ABC transporter ATP-binding protein 4171970 glnQ 12760277 glnQ Escherichia coli KO11FL glutamine ABC transporter ATP-binding protein YP_006166264.1 4171248 D 595495 CDS YP_006166265.1 386702428 12760278 complement(4171987..4172088) 1 NC_017660.1 hypothetical protein 4172088 12760278 KO11_19735 Escherichia coli KO11FL hypothetical protein YP_006166265.1 4171987 R 595495 CDS YP_006166266.1 386702429 12760279 4172087..4174312 1 NC_017660.1 COG0668 Small-conductance mechanosensitive channel; putative mechanosensitive channel protein 4174312 ybiO 12760279 ybiO Escherichia coli KO11FL putative mechanosensitive channel protein YP_006166266.1 4172087 D 595495 CDS YP_006166267.1 386702430 12760280 complement(4174309..4175235) 1 NC_017660.1 COG3129 Predicted SAM-dependent methyltransferase; 23S rRNA mA1618 methyltransferase 4175235 rlmF 12760280 rlmF Escherichia coli KO11FL 23S rRNA mA1618 methyltransferase YP_006166267.1 4174309 R 595495 CDS YP_006166268.1 386702431 12760281 4175511..4175771 1 NC_017660.1 mcbA; hypothetical protein 4175771 12760281 KO11_19750 Escherichia coli KO11FL hypothetical protein YP_006166268.1 4175511 D 595495 CDS YP_006166269.1 386702432 12760282 4176036..4178318 1 NC_017660.1 COG4774 Outer membrane receptor for monomeric catechols; catecholate siderophore receptor Fiu 4178318 fiu 12760282 fiu Escherichia coli KO11FL catecholate siderophore receptor Fiu YP_006166269.1 4176036 D 595495 CDS YP_006166270.1 386702433 12760283 4178360..4179037 1 NC_017660.1 COG3128 Uncharacterized iron-regulated protein; Fe(II)-dependent oxygenase superfamily protein 4179037 ybiX 12760283 ybiX Escherichia coli KO11FL Fe(II)-dependent oxygenase superfamily protein YP_006166270.1 4178360 D 595495 CDS YP_006166271.1 386702434 12760284 4179111..4179377 1 NC_017660.1 COG1734 DnaK suppressor protein; ybiI; hypothetical protein 4179377 12760284 KO11_19765 Escherichia coli KO11FL hypothetical protein YP_006166271.1 4179111 D 595495 CDS YP_006166272.1 386702435 12760285 4179642..4179902 1 NC_017660.1 ybiJ; hypothetical protein 4179902 12760285 KO11_19770 Escherichia coli KO11FL hypothetical protein YP_006166272.1 4179642 D 595495 CDS YP_006166273.1 386702436 12760286 complement(4180131..4181216) 1 NC_017660.1 COG2055 Malate/L-lactate dehydrogenases; putative dehydrogenase 4181216 ybiC 12760286 ybiC Escherichia coli KO11FL putative dehydrogenase YP_006166273.1 4180131 R 595495 CDS YP_006166274.1 386702437 12760287 complement(4181357..4182319) 1 NC_017660.1 COG0547 Anthranilate phosphoribosyltransferase; glycosyl transferase family protein 4182319 ybiB 12760287 ybiB Escherichia coli KO11FL glycosyl transferase family protein YP_006166274.1 4181357 R 595495 CDS YP_006166275.1 386702438 12760288 complement(4182347..4184605) 1 NC_017660.1 COG1199 Rad3-related DNA helicases; ATP-dependent DNA helicase DinG 4184605 dinG 12760288 dinG Escherichia coli KO11FL ATP-dependent DNA helicase DinG YP_006166275.1 4182347 R 595495 CDS YP_006166276.1 386702439 12760289 4184650..4185099 1 NC_017660.1 COG3236 Uncharacterized protein conserved in bacteria; ybiA; hypothetical protein 4185099 12760289 KO11_19790 Escherichia coli KO11FL hypothetical protein YP_006166276.1 4184650 D 595495 CDS YP_006166277.1 386702440 12760290 complement(4185331..4186695) 1 NC_017660.1 COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlE 4186695 rhlE 12760290 rhlE Escherichia coli KO11FL ATP-dependent RNA helicase RhlE YP_006166277.1 4185331 R 595495 CDS YP_006166278.1 386702441 12760291 4186924..4187595 1 NC_017660.1 COG1309 Transcriptional regulator; putative DNA-binding transcriptional regulator 4187595 ybiH 12760291 ybiH Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006166278.1 4186924 D 595495 CDS YP_006166279.1 386702442 12760292 4187598..4188593 1 NC_017660.1 COG0845 Membrane-fusion protein; putative efflux pump membrane fusion protein 4188593 ybhG 12760292 ybhG Escherichia coli KO11FL putative efflux pump membrane fusion protein YP_006166279.1 4187598 D 595495 CDS YP_006166280.1 386702443 12760293 4188586..4190322 1 NC_017660.1 COG1131 ABC-type multidrug transport system, ATPase component; fused putative transporter subunits of ABC superfamily: ATP-binding components 4190322 ybhF 12760293 ybhF Escherichia coli KO11FL fused putative transporter subunits of ABC superfamily: ATP-binding components YP_006166280.1 4188586 D 595495 CDS YP_006166281.1 386702444 12760294 4190315..4191448 1 NC_017660.1 COG0842 ABC-type multidrug transport system, permease component; putative transporter subunit: permease component of ABC superfamily protein 4191448 ybhS 12760294 ybhS Escherichia coli KO11FL putative transporter subunit: permease component of ABC superfamily protein YP_006166281.1 4190315 D 595495 CDS YP_006166282.1 386702445 12760295 4191459..4192565 1 NC_017660.1 COG0842 ABC-type multidrug transport system, permease component; ybhR; hypothetical protein 4192565 12760295 KO11_19820 Escherichia coli KO11FL hypothetical protein YP_006166282.1 4191459 D 595495 CDS YP_006166283.1 386702446 12760296 complement(4192527..4192937) 1 NC_017660.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Inner membrane protein ybhQ 4192937 ybhQ 12760296 ybhQ Escherichia coli KO11FL Inner membrane protein ybhQ YP_006166283.1 4192527 R 595495 CDS YP_006166284.1 386702447 12760297 4193070..4193831 1 NC_017660.1 COG3568 Metal-dependent hydrolase; ybhP; hypothetical protein 4193831 12760297 KO11_19830 Escherichia coli KO11FL hypothetical protein YP_006166284.1 4193070 D 595495 CDS YP_006166285.1 386702448 12760298 4193828..4195069 1 NC_017660.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; cardiolipin synthase 2 4195069 ybhO 12760298 ybhO Escherichia coli KO11FL cardiolipin synthase 2 YP_006166285.1 4193828 D 595495 CDS YP_006166286.1 386702449 12760299 4195069..4196025 1 NC_017660.1 COG0392 Predicted integral membrane protein; ybhN; hypothetical protein 4196025 12760299 KO11_19840 Escherichia coli KO11FL hypothetical protein YP_006166286.1 4195069 D 595495 CDS YP_006166287.1 386702450 12760300 complement(4196061..4196774) 1 NC_017660.1 COG0670 Integral membrane protein, interacts with FtsH; ybhM; hypothetical protein 4196774 12760300 KO11_19845 Escherichia coli KO11FL hypothetical protein YP_006166287.1 4196061 R 595495 CDS YP_006166288.1 386702451 12760301 complement(4196979..4197683) 1 NC_017660.1 COG0670 Integral membrane protein, interacts with FtsH; putative inner membrane protein 4197683 ybhL 12760301 ybhL Escherichia coli KO11FL putative inner membrane protein YP_006166288.1 4196979 R 595495 CDS YP_006166289.1 386702452 12760302 complement(4197820..4198272) 1 NC_017660.1 COG0314 Molybdopterin converting factor, large subunit; molybdopterin guanine dinucleotide biosynthesis protein MoaE 4198272 moaE 12760302 moaE Escherichia coli KO11FL molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_006166289.1 4197820 R 595495 CDS YP_006166290.1 386702453 12760303 complement(4198274..4198519) 1 NC_017660.1 COG1977 Molybdopterin converting factor, small subunit; molybdopterin synthase small subunit 4198519 moaD 12760303 moaD Escherichia coli KO11FL molybdopterin synthase small subunit YP_006166290.1 4198274 R 595495 CDS YP_006166291.1 386702454 12760304 complement(4198512..4198997) 1 NC_017660.1 COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC 4198997 moaC 12760304 moaC Escherichia coli KO11FL molybdenum cofactor biosynthesis protein MoaC YP_006166291.1 4198512 R 595495 CDS YP_006166292.1 386702455 12760305 complement(4199000..4199512) 1 NC_017660.1 COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein B 4199512 moaB 12760305 moaB Escherichia coli KO11FL molybdenum cofactor biosynthesis protein B YP_006166292.1 4199000 R 595495 CDS YP_006166293.1 386702456 12760306 complement(4199534..4200523) 1 NC_017660.1 COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A 4200523 moaA 12760306 moaA Escherichia coli KO11FL molybdenum cofactor biosynthesis protein A YP_006166293.1 4199534 R 595495 CDS YP_006166294.1 386702457 12760307 4200920..4201828 1 NC_017660.1 COG0391 Uncharacterized conserved protein; putative transferase with NAD(P)-binding Rossmann-fold domain 4201828 ybhK 12760307 ybhK Escherichia coli KO11FL putative transferase with NAD(P)-binding Rossmann-fold domain YP_006166294.1 4200920 D 595495 CDS YP_006166295.1 386702458 12760308 complement(4202020..4204041) 1 NC_017660.1 COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B 4204041 uvrB 12760308 uvrB Escherichia coli KO11FL excinuclease ABC subunit B YP_006166295.1 4202020 R 595495 CDS YP_006166296.1 386702459 12760309 complement(4204620..4205297) 1 NC_017660.1 COG0132 Dethiobiotin synthetase; dithiobiotin synthetase 4205297 bioD 12760309 bioD Escherichia coli KO11FL dithiobiotin synthetase YP_006166296.1 4204620 R 595495 CDS YP_006166297.1 386702460 12760310 complement(4205290..4206045) 1 NC_017660.1 COG0500 SAM-dependent methyltransferases; biotin biosynthesis protein BioC 4206045 bioC 12760310 bioC Escherichia coli KO11FL biotin biosynthesis protein BioC YP_006166297.1 4205290 R 595495 CDS YP_006166298.1 386702461 12760311 complement(4206032..4207186) 1 NC_017660.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase 4207186 bioF 12760311 bioF Escherichia coli KO11FL 8-amino-7-oxononanoate synthase YP_006166298.1 4206032 R 595495 CDS YP_006166299.1 386702462 12760312 complement(4207183..4208223) 1 NC_017660.1 COG0502 Biotin synthase and related enzymes; biotin synthase 4208223 bioB 12760312 bioB Escherichia coli KO11FL biotin synthase YP_006166299.1 4207183 R 595495 CDS YP_006166300.1 386702463 12760313 4208310..4209599 1 NC_017660.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 4209599 bioA 12760313 bioA Escherichia coli KO11FL adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_006166300.1 4208310 D 595495 CDS YP_006166301.1 386702464 12760314 4209658..4210134 1 NC_017660.1 COG1881 Phospholipid-binding protein; putative kinase inhibitor protein 4210134 ybhB 12760314 ybhB Escherichia coli KO11FL putative kinase inhibitor protein YP_006166301.1 4209658 D 595495 CDS YP_006166302.1 386702465 12760315 4210286..4211569 1 NC_017660.1 COG4677 Pectin methylesterase; acyl-CoA thioesterase 4211569 ybhC 12760315 ybhC Escherichia coli KO11FL acyl-CoA thioesterase YP_006166302.1 4210286 D 595495 CDS YP_006166303.1 386702466 12760316 complement(4211803..4214064) 1 NC_017660.1 COG1048 Aconitase A; putative hydratase 4214064 ybhJ 12760316 ybhJ Escherichia coli KO11FL putative hydratase YP_006166303.1 4211803 R 595495 CDS YP_006166304.1 386702467 12760317 complement(4214247..4215680) 1 NC_017660.1 COG0471 Di- and tricarboxylate transporters; putative transporter 4215680 ybhI 12760317 ybhI Escherichia coli KO11FL putative transporter YP_006166304.1 4214247 R 595495 CDS YP_006166305.1 386702468 12760318 complement(4215756..4216808) 1 NC_017660.1 COG2828 Uncharacterized protein conserved in bacteria; ybhH; hypothetical protein 4216808 12760318 KO11_19935 Escherichia coli KO11FL hypothetical protein YP_006166305.1 4215756 R 595495 CDS YP_006166306.1 386702469 12760319 4216992..4217945 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 4217945 ybhD 12760319 ybhD Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006166306.1 4216992 D 595495 CDS YP_006166307.1 386702470 12760320 complement(4217986..4218981) 1 NC_017660.1 COG2706 3-carboxymuconate cyclase; 6-phosphogluconolactonase 4218981 pgl 12760320 pgl Escherichia coli KO11FL 6-phosphogluconolactonase YP_006166307.1 4217986 R 595495 CDS YP_006166308.1 386702471 12760321 4219136..4219954 1 NC_017660.1 COG0561 Predicted hydrolases of the HAD superfamily; pyridoxal phosphate (PLP) phosphatase 4219954 ybhA 12760321 ybhA Escherichia coli KO11FL pyridoxal phosphate (PLP) phosphatase YP_006166308.1 4219136 D 595495 CDS YP_006166309.1 386702472 12760322 complement(4219955..4221013) 1 NC_017660.1 COG4148 ABC-type molybdate transport system, ATPase component; molybdate transporter ATP-binding protein 4221013 modC 12760322 modC Escherichia coli KO11FL molybdate transporter ATP-binding protein YP_006166309.1 4219955 R 595495 CDS YP_006166310.1 386702473 12760323 complement(4221016..4221705) 1 NC_017660.1 COG4149 ABC-type molybdate transport system, permease component; molybdate ABC transporter permease 4221705 modB 12760323 modB Escherichia coli KO11FL molybdate ABC transporter permease YP_006166310.1 4221016 R 595495 CDS YP_006166311.1 386702474 12760324 complement(4221705..4222478) 1 NC_017660.1 COG0725 ABC-type molybdate transport system, periplasmic component; molybdate transporter periplasmic protein 4222478 modA 12760324 modA Escherichia coli KO11FL molybdate transporter periplasmic protein YP_006166311.1 4221705 R 595495 CDS YP_006166312.1 386702475 12760325 complement(4222645..4222794) 1 NC_017660.1 ybhT; hypothetical protein 4222794 12760325 KO11_19970 Escherichia coli KO11FL hypothetical protein YP_006166312.1 4222645 R 595495 CDS YP_006166313.1 386702476 12760326 4222923..4223711 1 NC_017660.1 COG2005 N-terminal domain of molybdenum-binding protein; DNA-binding transcriptional regulator ModE 4223711 modE 12760326 modE Escherichia coli KO11FL DNA-binding transcriptional regulator ModE YP_006166313.1 4222923 D 595495 CDS YP_006166314.1 386702477 12760327 4223779..4225251 1 NC_017660.1 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; putative molybdenum transport ATP-binding protein ModF 4225251 modF 12760327 modF Escherichia coli KO11FL putative molybdenum transport ATP-binding protein ModF YP_006166314.1 4223779 D 595495 CDS YP_006166315.1 386702478 12760328 4225514..4226530 1 NC_017660.1 COG1087 UDP-glucose 4-epimerase; UDP-galactose-4-epimerase 4226530 galE 12760328 galE Escherichia coli KO11FL UDP-galactose-4-epimerase YP_006166315.1 4225514 D 595495 CDS YP_006166316.1 386702479 12760329 4226540..4227586 1 NC_017660.1 COG1085 Galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase 4227586 galT 12760329 galT Escherichia coli KO11FL galactose-1-phosphate uridylyltransferase YP_006166316.1 4226540 D 595495 CDS YP_006166317.1 386702480 12760330 4227590..4228738 1 NC_017660.1 COG0153 Galactokinase; galactokinase 4228738 galK 12760330 galK Escherichia coli KO11FL galactokinase YP_006166317.1 4227590 D 595495 CDS YP_006166318.1 386702481 12760331 4228732..4229772 1 NC_017660.1 COG2017 Galactose mutarotase and related enzymes; galactose-1-epimerase 4229772 galM 12760331 galM Escherichia coli KO11FL galactose-1-epimerase YP_006166318.1 4228732 D 595495 CDS YP_006166319.1 386702482 12760332 4229977..4230729 1 NC_017660.1 COG0588 Phosphoglycerate mutase 1; phosphoglyceromutase 4230729 gpmA 12760332 gpmA Escherichia coli KO11FL phosphoglyceromutase YP_006166319.1 4229977 D 595495 CDS YP_006166320.1 386702483 12760333 complement(4230887..4231939) 1 NC_017660.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 4231939 aroG 12760333 aroG Escherichia coli KO11FL phospho-2-dehydro-3-deoxyheptonate aldolase YP_006166320.1 4230887 R 595495 CDS YP_006166321.1 386702484 12760334 4232255..4232635 1 NC_017660.1 ybgS; hypothetical protein 4232635 12760334 KO11_20015 Escherichia coli KO11FL hypothetical protein YP_006166321.1 4232255 D 595495 CDS YP_006166322.1 386702485 12760335 4232749..4233690 1 NC_017660.1 COG1230 Co/Zn/Cd efflux system component; zinc transporter ZitB 4233690 zitB 12760335 zitB Escherichia coli KO11FL zinc transporter ZitB YP_006166322.1 4232749 D 595495 CDS YP_006166323.1 386702486 12760336 complement(4233687..4234406) 1 NC_017660.1 COG3201 Nicotinamide mononucleotide transporter; nicotinamide riboside transporter PnuC 4234406 pnuC 12760336 pnuC Escherichia coli KO11FL nicotinamide riboside transporter PnuC YP_006166323.1 4233687 R 595495 CDS YP_006166324.1 386702487 12760337 complement(4234444..4235487) 1 NC_017660.1 COG0379 Quinolinate synthase; quinolinate synthetase 4235487 nadA 12760337 nadA Escherichia coli KO11FL quinolinate synthetase YP_006166324.1 4234444 R 595495 CDS YP_006166325.1 386702488 12760345 complement(4237055..4237846) 1 NC_017660.1 COG1729 Uncharacterized protein conserved in bacteria; tol-pal system protein YbgF 4237846 ybgF 12760345 ybgF Escherichia coli KO11FL tol-pal system protein YbgF YP_006166325.1 4237055 R 595495 CDS YP_006166326.1 386702489 12760346 complement(4237856..4238377) 1 NC_017660.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated outer membrane lipoprotein 4238377 pal 12760346 pal Escherichia coli KO11FL peptidoglycan-associated outer membrane lipoprotein YP_006166326.1 4237856 R 595495 CDS YP_006166327.1 386702490 12760347 complement(4238412..4239704) 1 NC_017660.1 COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB 4239704 tolB 12760347 tolB Escherichia coli KO11FL translocation protein TolB YP_006166327.1 4238412 R 595495 CDS YP_006166328.1 386702491 12760348 complement(4239837..4241102) 1 NC_017660.1 COG3064 Membrane protein involved in colicin uptake; cell envelope integrity inner membrane protein TolA 4241102 tolA 12760348 tolA Escherichia coli KO11FL cell envelope integrity inner membrane protein TolA YP_006166328.1 4239837 R 595495 CDS YP_006166329.1 386702492 12760349 complement(4241167..4241595) 1 NC_017660.1 COG0848 Biopolymer transport protein; colicin uptake protein TolR 4241595 tolR 12760349 tolR Escherichia coli KO11FL colicin uptake protein TolR YP_006166329.1 4241167 R 595495 CDS YP_006166330.1 386702493 12760350 complement(4241599..4242282) 1 NC_017660.1 COG0811 Biopolymer transport proteins; colicin uptake protein TolQ 4242282 tolQ 12760350 tolQ Escherichia coli KO11FL colicin uptake protein TolQ YP_006166330.1 4241599 R 595495 CDS YP_006166331.1 386702494 12760351 complement(4242288..4242692) 1 NC_017660.1 COG0824 Predicted thioesterase; acyl-CoA thioesterase YbgC 4242692 ybgC 12760351 ybgC Escherichia coli KO11FL acyl-CoA thioesterase YbgC YP_006166331.1 4242288 R 595495 CDS YP_006166332.1 386702495 12760352 complement(4242842..4243135) 1 NC_017660.1 COG3790 Predicted membrane protein; ybgE; hypothetical protein 4243135 12760352 KO11_20070 Escherichia coli KO11FL hypothetical protein YP_006166332.1 4242842 R 595495 CDS YP_006166333.1 386702496 12760353 complement(4243135..4243248) 1 NC_017660.1 COG4890 Predicted outer membrane lipoprotein; cyd operon protein YbgT 4243248 ybgT 12760353 ybgT Escherichia coli KO11FL cyd operon protein YbgT YP_006166333.1 4243135 R 595495 CDS YP_006166334.1 386702497 12760354 complement(4243263..4244402) 1 NC_017660.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome d ubiquinol oxidase subunit 2 4244402 cydB 12760354 cydB Escherichia coli KO11FL cytochrome d ubiquinol oxidase subunit 2 YP_006166334.1 4243263 R 595495 CDS YP_006166335.1 386702498 12760355 complement(4244418..4245986) 1 NC_017660.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome d terminal oxidase subunit 1 4245986 cydA 12760355 cydA Escherichia coli KO11FL cytochrome d terminal oxidase subunit 1 YP_006166335.1 4244418 R 595495 CDS YP_006166336.1 386702499 12760356 complement(4246581..4246808) 1 NC_017660.1 hypothetical protein 4246808 12760356 KO11_20090 Escherichia coli KO11FL hypothetical protein YP_006166336.1 4246581 R 595495 CDS YP_006166337.1 386702500 12760357 complement(4246833..4249466) 1 NC_017660.1 COG0383 Alpha-mannosidase; alpha-mannosidase 4249466 mngB 12760357 mngB Escherichia coli KO11FL alpha-mannosidase YP_006166337.1 4246833 R 595495 CDS YP_006166338.1 386702501 12760358 complement(4249484..4251460) 1 NC_017660.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC 4251460 mngA 12760358 mngA Escherichia coli KO11FL PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC YP_006166338.1 4249484 R 595495 CDS YP_006166339.1 386702502 12760359 4251569..4252291 1 NC_017660.1 COG2188 Transcriptional regulators; DNA-binding transcriptional repressor MngR 4252291 mngR 12760359 mngR Escherichia coli KO11FL DNA-binding transcriptional repressor MngR YP_006166339.1 4251569 D 595495 CDS YP_006166340.1 386702503 12760360 complement(4252395..4253264) 1 NC_017660.1 COG0074 Succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 4253264 sucD 12760360 sucD Escherichia coli KO11FL succinyl-CoA synthetase subunit alpha YP_006166340.1 4252395 R 595495 CDS YP_006166341.1 386702504 12760361 complement(4253264..4254430) 1 NC_017660.1 COG0045 Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta 4254430 sucC 12760361 sucC Escherichia coli KO11FL succinyl-CoA synthetase subunit beta YP_006166341.1 4253264 R 595495 CDS YP_006166342.1 386702505 12760362 complement(4254524..4255741) 1 NC_017660.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide succinyltransferase 4255741 sucB 12760362 sucB Escherichia coli KO11FL dihydrolipoamide succinyltransferase YP_006166342.1 4254524 R 595495 CDS YP_006166343.1 386702506 12760363 complement(4255756..4258557) 1 NC_017660.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; 2-oxoglutarate dehydrogenase E1 component 4258557 sucA 12760363 sucA Escherichia coli KO11FL 2-oxoglutarate dehydrogenase E1 component YP_006166343.1 4255756 R 595495 CDS YP_006166344.1 386702507 12760364 complement(4258758..4259474) 1 NC_017660.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; succinate dehydrogenase iron-sulfur subunit 4259474 sdhB 12760364 sdhB Escherichia coli KO11FL succinate dehydrogenase iron-sulfur subunit YP_006166344.1 4258758 R 595495 CDS YP_006166345.1 386702508 12760365 complement(4259490..4261256) 1 NC_017660.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase flavoprotein subunit 4261256 sdhA 12760365 sdhA Escherichia coli KO11FL succinate dehydrogenase flavoprotein subunit YP_006166345.1 4259490 R 595495 CDS YP_006166346.1 386702509 12760366 complement(4261256..4261603) 1 NC_017660.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit; succinate dehydrogenase cytochrome b556 small membrane subunit 4261603 sdhD 12760366 sdhD Escherichia coli KO11FL succinate dehydrogenase cytochrome b556 small membrane subunit YP_006166346.1 4261256 R 595495 CDS YP_006166347.1 386702510 12760367 complement(4261597..4262001) 1 NC_017660.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase cytochrome b556 large membrane subunit 4262001 sdhC 12760367 sdhC Escherichia coli KO11FL succinate dehydrogenase cytochrome b556 large membrane subunit YP_006166347.1 4261597 R 595495 CDS YP_006166348.1 386702511 12760368 4262695..4263978 1 NC_017660.1 COG0372 Citrate synthase; type II citrate synthase 4263978 gltA 12760368 gltA Escherichia coli KO11FL type II citrate synthase YP_006166348.1 4262695 D 595495 CDS YP_006166349.1 386702512 12760369 4264369..4264935 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; putative fimbrial-like protein 4264935 ybgD 12760369 ybgD Escherichia coli KO11FL putative fimbrial-like protein YP_006166349.1 4264369 D 595495 CDS YP_006166350.1 386702513 12760370 4264995..4267445 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; putative fimbrial usher protein 4267445 ybgQ 12760370 ybgQ Escherichia coli KO11FL putative fimbrial usher protein YP_006166350.1 4264995 D 595495 CDS YP_006166351.1 386702514 12760371 4267460..4268191 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; putative exported chaperone, PapD family protein 4268191 ybgP 12760371 ybgP Escherichia coli KO11FL putative exported chaperone, PapD family protein YP_006166351.1 4267460 D 595495 CDS YP_006166352.1 386702515 12760372 4268188..4269249 1 NC_017660.1 putative fimbrial-like adhesin protein 4269249 ybgO 12760372 ybgO Escherichia coli KO11FL putative fimbrial-like adhesin protein YP_006166352.1 4268188 D 595495 CDS YP_006166353.1 386702516 12760373 4269401..4270447 1 NC_017660.1 COG3180 Putative ammonia monooxygenase; putative regulator 4270447 abrB 12760373 abrB Escherichia coli KO11FL putative regulator YP_006166353.1 4269401 D 595495 CDS YP_006166354.1 386702517 12760374 complement(4270444..4271235) 1 NC_017660.1 COG0266 Formamidopyrimidine-DNA glycosylase; endonuclease VIII 4271235 nei 12760374 nei Escherichia coli KO11FL endonuclease VIII YP_006166354.1 4270444 R 595495 CDS YP_006166355.1 386702518 12760375 complement(4271271..4272005) 1 NC_017660.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B; LamB/YcsF family protein 4272005 ybgL 12760375 ybgL Escherichia coli KO11FL LamB/YcsF family protein YP_006166355.1 4271271 R 595495 CDS YP_006166356.1 386702519 12760376 complement(4271995..4272927) 1 NC_017660.1 COG1984 Allophanate hydrolase subunit 2; putative hydrolase subunit 4272927 ybgK 12760376 ybgK Escherichia coli KO11FL putative hydrolase subunit YP_006166356.1 4271995 R 595495 CDS YP_006166357.1 386702520 12760377 complement(4272921..4273577) 1 NC_017660.1 COG2049 Allophanate hydrolase subunit 1; putative carboxylase 4273577 ybgJ 12760377 ybgJ Escherichia coli KO11FL putative carboxylase YP_006166357.1 4272921 R 595495 CDS YP_006166358.1 386702521 12760378 complement(4273600..4274343) 1 NC_017660.1 COG0327 Uncharacterized conserved protein; metal-binding protein 4274343 ybgI 12760378 ybgI Escherichia coli KO11FL metal-binding protein YP_006166358.1 4273600 R 595495 CDS YP_006166359.1 386702522 12760379 4274614..4276095 1 NC_017660.1 COG3104 Dipeptide/tripeptide permease; dipeptide/tripeptide permease D 4276095 ybgH 12760379 ybgH Escherichia coli KO11FL dipeptide/tripeptide permease D YP_006166359.1 4274614 D 595495 CDS YP_006166360.1 386702523 12760380 complement(4276137..4277555) 1 NC_017660.1 COG0415 Deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase 4277555 phr 12760380 phr Escherichia coli KO11FL deoxyribodipyrimidine photolyase YP_006166360.1 4276137 R 595495 CDS YP_006166361.1 386702524 12760381 complement(4277552..4278061) 1 NC_017660.1 COG3272 Uncharacterized conserved protein; ybgA; hypothetical protein 4278061 12760381 KO11_20215 Escherichia coli KO11FL hypothetical protein YP_006166361.1 4277552 R 595495 CDS YP_006166362.1 386702525 12760382 complement(4278209..4278877) 1 NC_017660.1 COG5433 Transposase; putative transposase 4278877 12760382 KO11_20220 Escherichia coli KO11FL putative transposase YP_006166362.1 4278209 R 595495 CDS YP_006166363.1 386702526 12760383 complement(4279096..4279350) 1 NC_017660.1 COG5433 Transposase; putative transposase 4279350 ybfQ 12760383 ybfQ Escherichia coli KO11FL putative transposase YP_006166363.1 4279096 R 595495 CDS YP_006166364.1 386702527 12760384 complement(4279576..4280145) 1 NC_017660.1 ybfC; hypothetical protein 4280145 12760384 KO11_20230 Escherichia coli KO11FL hypothetical protein YP_006166364.1 4279576 R 595495 CDS YP_006166365.1 386702528 12760385 complement(4280142..4284341) 1 NC_017660.1 COG3209 Rhs family protein; partial match with E coli K-12 rhsC; RhsC core protein 4284341 rhsW4 12760385 rhsW4 Escherichia coli KO11FL RhsC core protein YP_006166365.1 4280142 R 595495 CDS YP_006166366.1 386702529 12760386 complement(4284584..4284790) 1 NC_017660.1 ybfA; hypothetical protein 4284790 12760386 KO11_20240 Escherichia coli KO11FL hypothetical protein YP_006166366.1 4284584 R 595495 CDS YP_006166367.1 386702530 12760387 4285192..4286865 1 NC_017660.1 COG2060 K+-transporting ATPase, A chain; potassium-transporting ATPase subunit A 4286865 kdpA 12760387 kdpA Escherichia coli KO11FL potassium-transporting ATPase subunit A YP_006166367.1 4285192 D 595495 CDS YP_006166368.1 386702531 12760388 4286888..4288936 1 NC_017660.1 COG2216 High-affinity K+ transport system, ATPase chain B; potassium-transporting ATPase subunit B 4288936 kdpB 12760388 kdpB Escherichia coli KO11FL potassium-transporting ATPase subunit B YP_006166368.1 4286888 D 595495 CDS YP_006166369.1 386702532 12760389 4288945..4289517 1 NC_017660.1 COG2156 K+-transporting ATPase, c chain; potassium-transporting ATPase subunit C 4289517 kdpC 12760389 kdpC Escherichia coli KO11FL potassium-transporting ATPase subunit C YP_006166369.1 4288945 D 595495 CDS YP_006166370.1 386702533 12760390 4289510..4292194 1 NC_017660.1 COG2205 Osmosensitive K+ channel histidine kinase; sensor protein KdpD 4292194 kdpD 12760390 kdpD Escherichia coli KO11FL sensor protein KdpD YP_006166370.1 4289510 D 595495 CDS YP_006166371.1 386702534 12760391 4292191..4292868 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional activator KdpE 4292868 kdpE 12760391 kdpE Escherichia coli KO11FL DNA-binding transcriptional activator KdpE YP_006166371.1 4292191 D 595495 CDS YP_006166372.1 386702535 12760392 4293549..4295756 1 NC_017660.1 COG1982 Arginine/lysine/ornithine decarboxylases; ornithine decarboxylase 4295756 speF 12760392 speF Escherichia coli KO11FL ornithine decarboxylase YP_006166372.1 4293549 D 595495 CDS YP_006166373.1 386702536 12760393 4295753..4297072 1 NC_017660.1 COG0531 Amino acid transporters; putrescine transporter 4297072 potE 12760393 potE Escherichia coli KO11FL putrescine transporter YP_006166373.1 4295753 D 595495 CDS YP_006166374.1 386702537 12760394 complement(4297128..4298768) 1 NC_017660.1 COG0033 Phosphoglucomutase; phosphoglucomutase 4298768 pgm 12760394 pgm Escherichia coli KO11FL phosphoglucomutase YP_006166374.1 4297128 R 595495 CDS YP_006166375.1 386702538 12760395 complement(4298794..4299339) 1 NC_017660.1 COG3057 Negative regulator of replication initiationR; replication initiation regulator SeqA 4299339 seqA 12760395 seqA Escherichia coli KO11FL replication initiation regulator SeqA YP_006166375.1 4298794 R 595495 CDS YP_006166376.1 386702539 12760396 4299524..4300288 1 NC_017660.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); acyl-CoA esterase 4300288 ybfF 12760396 ybfF Escherichia coli KO11FL acyl-CoA esterase YP_006166376.1 4299524 D 595495 CDS YP_006166377.1 386702540 12760397 4300359..4300721 1 NC_017660.1 LexA regulated protein 4300721 ybfE 12760397 ybfE Escherichia coli KO11FL LexA regulated protein YP_006166377.1 4300359 D 595495 CDS YP_006166378.1 386702541 12760398 4300861..4301391 1 NC_017660.1 COG0716 Flavodoxins; flavodoxin FldA 4301391 fldA 12760398 fldA Escherichia coli KO11FL flavodoxin FldA YP_006166378.1 4300861 D 595495 CDS YP_006166379.1 386702542 12760399 4301680..4302126 1 NC_017660.1 COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulator 4302126 fur 12760399 fur Escherichia coli KO11FL ferric uptake regulator YP_006166379.1 4301680 D 595495 CDS YP_006166380.1 386702543 12760400 complement(4302210..4302536) 1 NC_017660.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; putative lipoprotein 4302536 ybfN 12760400 ybfN Escherichia coli KO11FL putative lipoprotein YP_006166380.1 4302210 R 595495 CDS YP_006166381.1 386702544 12760401 complement(4302586..4303992) 1 NC_017660.1 putative outer membrane porin 4303992 ybfM 12760401 ybfM Escherichia coli KO11FL putative outer membrane porin YP_006166381.1 4302586 R 595495 CDS YP_006166382.1 386702545 12760402 complement(4304438..4306102) 1 NC_017660.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutaminyl-tRNA synthetase 4306102 glnS 12760402 glnS Escherichia coli KO11FL glutaminyl-tRNA synthetase YP_006166382.1 4304438 R 595495 CDS YP_006166383.1 386702546 12760403 complement(4306305..4308251) 1 NC_017660.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; PTS system N-acetyl glucosamine specific transporter subunit IIABC 4308251 nagE 12760403 nagE Escherichia coli KO11FL PTS system N-acetyl glucosamine specific transporter subunit IIABC YP_006166383.1 4306305 R 595495 CDS YP_006166384.1 386702547 12760404 4308584..4309384 1 NC_017660.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; glucosamine-6-phosphate deaminase 4309384 nagB 12760404 nagB Escherichia coli KO11FL glucosamine-6-phosphate deaminase YP_006166384.1 4308584 D 595495 CDS YP_006166385.1 386702548 12760405 4309443..4310591 1 NC_017660.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 4310591 nagA 12760405 nagA Escherichia coli KO11FL N-acetylglucosamine-6-phosphate deacetylase YP_006166385.1 4309443 D 595495 CDS YP_006166386.1 386702549 12760406 4310600..4311820 1 NC_017660.1 COG1940 Transcriptional regulator/sugar kinase; N-acetylglucosamine repressor 4311820 nagC 12760406 nagC Escherichia coli KO11FL N-acetylglucosamine repressor YP_006166386.1 4310600 D 595495 CDS YP_006166387.1 386702550 12760407 4311868..4312620 1 NC_017660.1 COG0647 Predicted sugar phosphatases of the HAD superfamily; UMP phosphatase 4312620 nagD 12760407 nagD Escherichia coli KO11FL UMP phosphatase YP_006166387.1 4311868 D 595495 CDS YP_006166388.1 386702551 12760408 4312877..4314541 1 NC_017660.1 COG0367 Asparagine synthase (glutamine-hydrolyzing); asparagine synthetase B 4314541 asnB 12760408 asnB Escherichia coli KO11FL asparagine synthetase B YP_006166388.1 4312877 D 595495 CDS YP_006166389.1 386702552 12760416 complement(4315779..4316954) 1 NC_017660.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 4316954 ubiF 12760416 ubiF Escherichia coli KO11FL 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_006166389.1 4315779 R 595495 CDS YP_006166390.1 386702553 12760417 4317100..4318524 1 NC_017660.1 COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 4318524 miaB 12760417 miaB Escherichia coli KO11FL (dimethylallyl)adenosine tRNA methylthiotransferase YP_006166390.1 4317100 D 595495 CDS YP_006166391.1 386702554 12760418 4318677..4319717 1 NC_017660.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; PhoH family protein 4319717 ybeZ 12760418 ybeZ Escherichia coli KO11FL PhoH family protein YP_006166391.1 4318677 D 595495 CDS YP_006166392.1 386702555 12760419 4319714..4320181 1 NC_017660.1 COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein 4320181 ybeY 12760419 ybeY Escherichia coli KO11FL metal-binding heat shock protein YP_006166392.1 4319714 D 595495 CDS YP_006166393.1 386702556 12760420 4320271..4321149 1 NC_017660.1 COG4535 Putative Mg2+ and Co2+ transporter CorC; magnesium/cobalt efflux protein CorC 4321149 ybeX 12760420 ybeX Escherichia coli KO11FL magnesium/cobalt efflux protein CorC YP_006166393.1 4320271 D 595495 CDS YP_006166394.1 386702557 12760421 4321174..4322712 1 NC_017660.1 COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 4322712 lnt 12760421 lnt Escherichia coli KO11FL apolipoprotein N-acyltransferase YP_006166394.1 4321174 D 595495 CDS YP_006166395.1 386702558 12760422 4325121..4326029 1 NC_017660.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamate and aspartate transporter subunit 4326029 gltI 12760422 gltI Escherichia coli KO11FL glutamate and aspartate transporter subunit YP_006166395.1 4325121 D 595495 CDS YP_006166396.1 386702559 12760424 4326199..4326939 1 NC_017660.1 COG0765 ABC-type amino acid transport system, permease component; glutamate/aspartate transport system permease GltJ 4326939 gltJ 12760424 gltJ Escherichia coli KO11FL glutamate/aspartate transport system permease GltJ YP_006166396.1 4326199 D 595495 CDS YP_006166397.1 386702560 12760426 4326939..4327613 1 NC_017660.1 COG0765 ABC-type amino acid transport system, permease component; glutamate/aspartate transport system permease GltK 4327613 gltK 12760426 gltK Escherichia coli KO11FL glutamate/aspartate transport system permease GltK YP_006166397.1 4326939 D 595495 CDS YP_006166398.1 386702561 12760427 4327613..4328338 1 NC_017660.1 COG1126 ABC-type polar amino acid transport system, ATPase component; glutamate-aspartate ABC transporter ATP-binding protein 4328338 gltL 12760427 gltL Escherichia coli KO11FL glutamate-aspartate ABC transporter ATP-binding protein YP_006166398.1 4327613 D 595495 CDS YP_006166399.1 386702562 12760428 4328456..4329391 1 NC_017660.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase; ribonucleoside hydrolase 1 4329391 rihA 12760428 rihA Escherichia coli KO11FL ribonucleoside hydrolase 1 YP_006166399.1 4328456 D 595495 CDS YP_006166400.1 386702563 12760429 4329475..4331145 1 NC_017660.1 COG0443 Molecular chaperone; HSP70 family chaperone Hsc62, binds to RpoD and inhibits transcription 4331145 hscC 12760429 hscC Escherichia coli KO11FL HSP70 family chaperone Hsc62, binds to RpoD and inhibits transcription YP_006166400.1 4329475 D 595495 CDS YP_006166401.1 386702564 12760430 complement(4331205..4332656) 1 NC_017660.1 Hsc56 co-chaperone of HscC 4332656 djlC 12760430 djlC Escherichia coli KO11FL Hsc56 co-chaperone of HscC YP_006166401.1 4331205 R 595495 CDS YP_006166402.1 386702565 12760431 complement(4332653..4333360) 1 NC_017660.1 putative tRNA ligase 4333360 ybeU 12760431 ybeU Escherichia coli KO11FL putative tRNA ligase YP_006166402.1 4332653 R 595495 CDS YP_006166403.1 386702566 12760432 4333461..4334015 1 NC_017660.1 COG0790 FOG: TPR repeat, SEL1 subfamily; ybeT; hypothetical protein 4334015 12760432 KO11_20435 Escherichia coli KO11FL hypothetical protein YP_006166403.1 4333461 D 595495 CDS YP_006166404.1 386702567 12760433 complement(4334025..4335452) 1 NC_017660.1 COG2214 DnaJ-class molecular chaperone; molecular chaperone DnaJ 4335452 djlB 12760433 djlB Escherichia coli KO11FL molecular chaperone DnaJ YP_006166404.1 4334025 R 595495 CDS YP_006166405.1 386702568 12760434 complement(4335449..4336156) 1 NC_017660.1 ybeR; hypothetical protein 4336156 12760434 KO11_20445 Escherichia coli KO11FL hypothetical protein YP_006166405.1 4335449 R 595495 CDS YP_006166406.1 386702569 12760435 4336320..4337297 1 NC_017660.1 COG0790 FOG: TPR repeat, SEL1 subfamily; ybeQ; hypothetical protein 4337297 12760435 KO11_20450 Escherichia coli KO11FL hypothetical protein YP_006166406.1 4336320 D 595495 CDS YP_006166407.1 386702570 12760436 complement(4337367..4337849) 1 NC_017660.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; ybeL; hypothetical protein 4337849 12760436 KO11_20455 Escherichia coli KO11FL hypothetical protein YP_006166407.1 4337367 R 595495 CDS YP_006166408.1 386702571 12760437 4338084..4340666 1 NC_017660.1 COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 4340666 leuS 12760437 leuS Escherichia coli KO11FL leucyl-tRNA synthetase YP_006166408.1 4338084 D 595495 CDS YP_006166409.1 386702572 12760438 4340681..4341262 1 NC_017660.1 COG2980 Rare lipoprotein B; LPS-assembly lipoprotein RlpB 4341262 lptE 12760438 lptE Escherichia coli KO11FL LPS-assembly lipoprotein RlpB YP_006166409.1 4340681 D 595495 CDS YP_006166410.1 386702573 12760439 4341262..4342293 1 NC_017660.1 COG1466 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 4342293 holA 12760439 holA Escherichia coli KO11FL DNA polymerase III subunit delta YP_006166410.1 4341262 D 595495 CDS YP_006166411.1 386702574 12760440 4342295..4342936 1 NC_017660.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinic acid mononucleotide adenylyltransferase 4342936 nadD 12760440 nadD Escherichia coli KO11FL nicotinic acid mononucleotide adenylyltransferase YP_006166411.1 4342295 D 595495 CDS YP_006166412.1 386702575 12760441 4342960..4343571 1 NC_017660.1 COG0406 Fructose-2,6-bisphosphatase; alpha-ribazole phosphatase 4343571 cobC 12760441 cobC Escherichia coli KO11FL alpha-ribazole phosphatase YP_006166412.1 4342960 D 595495 CDS YP_006166413.1 386702576 12760442 4343831..4344148 1 NC_017660.1 COG0799 Uncharacterized homolog of plant Iojap protein; ribosome-associated protein 4344148 ybeB 12760442 ybeB Escherichia coli KO11FL ribosome-associated protein YP_006166413.1 4343831 D 595495 CDS YP_006166414.1 386702577 12760443 4344152..4344619 1 NC_017660.1 COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase 4344619 rlmH 12760443 rlmH Escherichia coli KO11FL rRNA large subunit methyltransferase YP_006166414.1 4344152 D 595495 CDS YP_006166415.1 386702578 12760444 4344650..4346551 1 NC_017660.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 4346551 mrdA 12760444 mrdA Escherichia coli KO11FL penicillin-binding protein 2 YP_006166415.1 4344650 D 595495 CDS YP_006166416.1 386702579 12760445 4346554..4347666 1 NC_017660.1 COG0772 Bacterial cell division membrane protein; cell wall shape-determining protein 4347666 mrdB 12760445 mrdB Escherichia coli KO11FL cell wall shape-determining protein YP_006166416.1 4346554 D 595495 CDS YP_006166417.1 386702580 12760446 4347677..4348765 1 NC_017660.1 COG0797 Lipoproteins; rare lipoprotein A 4348765 rlpA 12760446 rlpA Escherichia coli KO11FL rare lipoprotein A YP_006166417.1 4347677 D 595495 CDS YP_006166418.1 386702581 12760447 4348905..4350116 1 NC_017660.1 COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 4350116 dacA 12760447 dacA Escherichia coli KO11FL D-alanyl-D-alanine carboxypeptidase YP_006166418.1 4348905 D 595495 CDS YP_006166419.1 386702582 12760448 4350227..4350490 1 NC_017660.1 COG2921 Uncharacterized conserved protein; ybeD; hypothetical protein 4350490 12760448 KO11_20515 Escherichia coli KO11FL hypothetical protein YP_006166419.1 4350227 D 595495 CDS YP_006166420.1 386702583 12760449 4350591..4351232 1 NC_017660.1 COG0321 Lipoate-protein ligase B; lipoate-protein ligase B 4351232 lipB 12760449 lipB Escherichia coli KO11FL lipoate-protein ligase B YP_006166420.1 4350591 D 595495 CDS YP_006166421.1 386702584 12760450 4351491..4352444 1 NC_017660.1 COG0583 Transcriptional regulator; putative DNA-binding transcriptional regulator 4352444 ybeF 12760450 ybeF Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006166421.1 4351491 D 595495 CDS YP_006166422.1 386702585 12760451 4352653..4353618 1 NC_017660.1 COG0320 Lipoate synthase; lipoyl synthase 4353618 lipA 12760451 lipA Escherichia coli KO11FL lipoyl synthase YP_006166422.1 4352653 D 595495 CDS YP_006166423.1 386702586 12760452 complement(4353719..4353922) 1 NC_017660.1 COG1826 Sec-independent protein secretion pathway components; twin arginine translocase protein E 4353922 tatE 12760452 tatE Escherichia coli KO11FL twin arginine translocase protein E YP_006166423.1 4353719 R 595495 CDS YP_006166424.1 386702587 12760453 complement(4354051..4354839) 1 NC_017660.1 COG0388 Predicted amidohydrolase; putative amidase 4354839 ybeM 12760453 ybeM Escherichia coli KO11FL putative amidase YP_006166424.1 4354051 R 595495 CDS YP_006166425.1 386702588 12760454 4354932..4355315 1 NC_017660.1 COG0239 Integral membrane protein possibly involved in chromosome condensation; chromosome condensation membrane protein 4355315 crcB 12760454 crcB Escherichia coli KO11FL chromosome condensation membrane protein YP_006166425.1 4354932 D 595495 CDS YP_006166426.1 386702589 12760455 complement(4355369..4355578) 1 NC_017660.1 COG1278 Cold shock proteins; cold shock protein CspE 4355578 cspE 12760455 cspE Escherichia coli KO11FL cold shock protein CspE YP_006166426.1 4355369 R 595495 CDS YP_006166427.1 386702590 12760456 complement(4355753..4356313) 1 NC_017660.1 phospholipid:lipid A palmitoyltransferase 4356313 pagP 12760456 pagP Escherichia coli KO11FL phospholipid:lipid A palmitoyltransferase YP_006166427.1 4355753 R 595495 CDS YP_006166428.1 386702591 12760457 4356901..4358286 1 NC_017660.1 COG3069 C4-dicarboxylate transporter; C4-dicarboxylate transporter DcuC 4358286 dcuC 12760457 dcuC Escherichia coli KO11FL C4-dicarboxylate transporter DcuC YP_006166428.1 4356901 D 595495 CDS YP_006166429.1 386702592 12760458 complement(4358327..4359007) 1 NC_017660.1 COG4565 Response regulator of citrate/malate metabolism; two-component response regulator DpiA 4359007 dpiA 12760458 dpiA Escherichia coli KO11FL two-component response regulator DpiA YP_006166429.1 4358327 R 595495 CDS YP_006166430.1 386702593 12760459 complement(4358976..4360634) 1 NC_017660.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; sensor histidine kinase DpiB 4360634 dpiB 12760459 dpiB Escherichia coli KO11FL sensor histidine kinase DpiB YP_006166430.1 4358976 R 595495 CDS YP_006166431.1 386702594 12760460 4361014..4362072 1 NC_017660.1 COG3053 Citrate lyase synthetase; citrate lyase synthetase 4362072 citC 12760460 citC Escherichia coli KO11FL citrate lyase synthetase YP_006166431.1 4361014 D 595495 CDS YP_006166432.1 386702595 12760461 4362087..4362383 1 NC_017660.1 COG3052 Citrate lyase, gamma subunit; citrate lyase subunit gamma 4362383 citD 12760461 citD Escherichia coli KO11FL citrate lyase subunit gamma YP_006166432.1 4362087 D 595495 CDS YP_006166433.1 386702596 12760462 4362380..4363288 1 NC_017660.1 COG2301 Citrate lyase beta subunit; citrate lyase subunit beta 4363288 citE 12760462 citE Escherichia coli KO11FL citrate lyase subunit beta YP_006166433.1 4362380 D 595495 CDS YP_006166434.1 386702597 12760463 4363299..4364831 1 NC_017660.1 COG3051 Citrate lyase, alpha subunit; Citrate lyase, alpha subunit 4364831 citF 12760463 citF Escherichia coli KO11FL Citrate lyase, alpha subunit YP_006166434.1 4363299 D 595495 CDS YP_006166435.1 386702598 12760464 4364835..4365386 1 NC_017660.1 COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase); 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 4365386 citX 12760464 citX Escherichia coli KO11FL 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase YP_006166435.1 4364835 D 595495 CDS YP_006166436.1 386702599 12760465 4365361..4366239 1 NC_017660.1 COG1767 Triphosphoribosyl-dephospho-CoA synthetase; triphosphoribosyl-dephospho-CoA synthase 4366239 citG 12760465 citG Escherichia coli KO11FL triphosphoribosyl-dephospho-CoA synthase YP_006166436.1 4365361 D 595495 CDS YP_006166437.1 386702600 12760466 4366290..4367753 1 NC_017660.1 COG0471 Di- and tricarboxylate transporters; citrate/succinate antiporter CitT 4367753 citT 12760466 citT Escherichia coli KO11FL citrate/succinate antiporter CitT YP_006166437.1 4366290 D 595495 CDS YP_006166438.1 386702601 12760467 4367867..4368673 1 NC_017660.1 COG3719 Ribonuclease I; ribonuclease I 4368673 rna 12760467 rna Escherichia coli KO11FL ribonuclease I YP_006166438.1 4367867 D 595495 CDS YP_006166439.1 386702602 12760468 4368903..4369313 1 NC_017660.1 COG0782 Transcription elongation factor; nucleoside diphosphate kinase regulator 4369313 rnk 12760468 rnk Escherichia coli KO11FL nucleoside diphosphate kinase regulator YP_006166439.1 4368903 D 595495 CDS YP_006166440.1 386702603 12760469 complement(4369544..4370782) 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Oxidoreductase, zinc-binding dehydrogenase family protein 4370782 ybdR 12760469 ybdR Escherichia coli KO11FL Oxidoreductase, zinc-binding dehydrogenase family protein YP_006166440.1 4369544 R 595495 CDS YP_006166441.1 386702604 12760470 4371003..4371431 1 NC_017660.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspG 4371431 uspG 12760470 uspG Escherichia coli KO11FL universal stress protein UspG YP_006166441.1 4371003 D 595495 CDS YP_006166442.1 386702605 12760471 complement(4371552..4373117) 1 NC_017660.1 COG3634 Alkyl hydroperoxide reductase, large subunit; alkyl hydroperoxide reductase subunit F 4373117 ahpF 12760471 ahpF Escherichia coli KO11FL alkyl hydroperoxide reductase subunit F YP_006166442.1 4371552 R 595495 CDS YP_006166443.1 386702606 12760472 complement(4373288..4373851) 1 NC_017660.1 COG0450 Peroxiredoxin; alkyl hydroperoxide reductase subunit C 4373851 ahpC 12760472 ahpC Escherichia coli KO11FL alkyl hydroperoxide reductase subunit C YP_006166443.1 4373288 R 595495 CDS YP_006166444.1 386702607 12760473 4374223..4374969 1 NC_017660.1 COG1651 Protein-disulfide isomerase; disulfide isomerase/thiol-disulfide oxidase 4374969 dsbG 12760473 dsbG Escherichia coli KO11FL disulfide isomerase/thiol-disulfide oxidase YP_006166444.1 4374223 D 595495 CDS YP_006166445.1 386702608 12760474 4375178..4376080 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 4376080 ybdO 12760474 ybdO Escherichia coli KO11FL LysR family transcriptional regulator YP_006166445.1 4375178 D 595495 CDS YP_006166446.1 386702609 12760475 4376227..4377447 1 NC_017660.1 COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase; phosphoadenosine phosphosulfate reductase 4377447 ybdN 12760475 ybdN Escherichia coli KO11FL phosphoadenosine phosphosulfate reductase YP_006166446.1 4376227 D 595495 CDS YP_006166447.1 386702610 12760476 4377432..4378049 1 NC_017660.1 COG1475 Predicted transcriptional regulators; ybdM; hypothetical protein 4378049 12760476 KO11_20655 Escherichia coli KO11FL hypothetical protein YP_006166447.1 4377432 D 595495 CDS YP_006166448.1 386702611 12760477 complement(4378050..4379210) 1 NC_017660.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase; methionine aminotransferase 4379210 ybdL 12760477 ybdL Escherichia coli KO11FL methionine aminotransferase YP_006166448.1 4378050 R 595495 CDS YP_006166449.1 386702612 12760478 4379319..4380407 1 NC_017660.1 COG0371 Glycerol dehydrogenase and related enzymes; putative oxidoreductase 4380407 ybdH 12760478 ybdH Escherichia coli KO11FL putative oxidoreductase YP_006166449.1 4379319 D 595495 CDS YP_006166450.1 386702613 12760479 complement(4380417..4380614) 1 NC_017660.1 COG2879 Uncharacterized small protein; ybdD; hypothetical protein 4380614 12760479 KO11_20670 Escherichia coli KO11FL hypothetical protein YP_006166450.1 4380417 R 595495 CDS YP_006166451.1 386702614 12760480 complement(4380796..4382901) 1 NC_017660.1 COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein A 4382901 cstA 12760480 cstA Escherichia coli KO11FL carbon starvation protein A YP_006166451.1 4380796 R 595495 CDS YP_006166452.1 386702615 12760481 complement(4383082..4383495) 1 NC_017660.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; thioesterase 4383495 entH 12760481 entH Escherichia coli KO11FL thioesterase YP_006166452.1 4383082 R 595495 CDS YP_006166453.1 386702616 12760482 complement(4383498..4384244) 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 2,3-dihydroxybenzoate-2,3-dehydrogenase 4384244 entA 12760482 entA Escherichia coli KO11FL 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_006166453.1 4383498 R 595495 CDS YP_006166454.1 386702617 12760483 complement(4384244..4385101) 1 NC_017660.1 COG1535 Isochorismate hydrolase; isochorismatase 4385101 entB 12760483 entB Escherichia coli KO11FL isochorismatase YP_006166454.1 4384244 R 595495 CDS YP_006166455.1 386702618 12760484 complement(4385115..4386725) 1 NC_017660.1 COG1021 Peptide arylation enzymes; enterobactin synthase subunit E 4386725 entE 12760484 entE Escherichia coli KO11FL enterobactin synthase subunit E YP_006166455.1 4385115 R 595495 CDS YP_006166456.1 386702619 12760485 complement(4386735..4387910) 1 NC_017660.1 COG1169 Isochorismate synthase; isochorismate synthase EntC 4387910 entC 12760485 entC Escherichia coli KO11FL isochorismate synthase EntC YP_006166456.1 4386735 R 595495 CDS YP_006166457.1 386702620 12760486 4388285..4389241 1 NC_017660.1 COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component; iron-enterobactin transporter periplasmic binding protein 4389241 fepB 12760486 fepB Escherichia coli KO11FL iron-enterobactin transporter periplasmic binding protein YP_006166457.1 4388285 D 595495 CDS YP_006166458.1 386702621 12760487 complement(4389245..4390495) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; enterobactin exporter EntS 4390495 entS 12760487 entS Escherichia coli KO11FL enterobactin exporter EntS YP_006166458.1 4389245 R 595495 CDS YP_006166459.1 386702622 12760488 4390606..4391610 1 NC_017660.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron-enterobactin transporter membrane protein 4391610 fepD 12760488 fepD Escherichia coli KO11FL iron-enterobactin transporter membrane protein YP_006166459.1 4390606 D 595495 CDS YP_006166460.1 386702623 12760489 4391607..4392599 1 NC_017660.1 COG4779 ABC-type enterobactin transport system, permease component; iron-enterobactin transporter permease 4392599 fepG 12760489 fepG Escherichia coli KO11FL iron-enterobactin transporter permease YP_006166460.1 4391607 D 595495 CDS YP_006166461.1 386702624 12760490 4392596..4393411 1 NC_017660.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron-enterobactin transporter ATP-binding protein 4393411 fepC 12760490 fepC Escherichia coli KO11FL iron-enterobactin transporter ATP-binding protein YP_006166461.1 4392596 D 595495 CDS YP_006166462.1 386702625 12760491 complement(4393408..4394541) 1 NC_017660.1 COG3765 Chain length determinant protein; LPS O-antigen length regulator 4394541 fepE 12760491 fepE Escherichia coli KO11FL LPS O-antigen length regulator YP_006166462.1 4393408 R 595495 CDS YP_006166463.1 386702626 12760492 complement(4394757..4398638) 1 NC_017660.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins; enterobactin synthase subunit F 4398638 entF 12760492 entF Escherichia coli KO11FL enterobactin synthase subunit F YP_006166463.1 4394757 R 595495 CDS YP_006166464.1 386702627 12760493 complement(4398635..4398853) 1 NC_017660.1 COG3251 Uncharacterized protein conserved in bacteria; ybdZ; hypothetical protein 4398853 12760493 KO11_20740 Escherichia coli KO11FL hypothetical protein YP_006166464.1 4398635 R 595495 CDS YP_006166465.1 386702628 12760494 complement(4398856..4400058) 1 NC_017660.1 COG2382 Enterochelin esterase and related enzymes; enterobactin/ferric enterobactin esterase 4400058 fes 12760494 fes Escherichia coli KO11FL enterobactin/ferric enterobactin esterase YP_006166465.1 4398856 R 595495 CDS YP_006166466.1 386702629 12760495 4400301..4402541 1 NC_017660.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins; outer membrane receptor FepA 4402541 fepA 12760495 fepA Escherichia coli KO11FL outer membrane receptor FepA YP_006166466.1 4400301 D 595495 CDS YP_006166467.1 386702630 12760496 4402707..4403336 1 NC_017660.1 COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex 4403336 entD 12760496 entD Escherichia coli KO11FL phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex YP_006166467.1 4402707 D 595495 CDS YP_006166468.1 386702631 12760497 complement(4403458..4403610) 1 NC_017660.1 small toxic polypeptide 4403610 hokE2 12760497 hokE2 Escherichia coli KO11FL small toxic polypeptide YP_006166468.1 4403458 R 595495 CDS YP_006166469.1 386702632 12760498 complement(4403961..4404113) 1 NC_017660.1 small toxic polypeptide 4404113 hokE1 12760498 hokE1 Escherichia coli KO11FL small toxic polypeptide YP_006166469.1 4403961 R 595495 CDS YP_006166470.1 386702633 12760499 complement(4404379..4404480) 1 NC_017660.1 hypothetical protein 4404480 12760499 KO11_20770 Escherichia coli KO11FL hypothetical protein YP_006166470.1 4404379 R 595495 CDS YP_006166471.1 386702634 12760500 4404555..4405673 1 NC_017660.1 COG2170 Uncharacterized conserved protein; gamma-glutamyl:cysteine ligase 4405673 ybdK 12760500 ybdK Escherichia coli KO11FL gamma-glutamyl:cysteine ligase YP_006166471.1 4404555 D 595495 CDS YP_006166472.1 386702635 12760501 4405787..4405987 1 NC_017660.1 putative inner membrane protein 4405987 ybdJ 12760501 ybdJ Escherichia coli KO11FL putative inner membrane protein YP_006166472.1 4405787 D 595495 CDS YP_006166473.1 386702636 12760502 4406052..4406420 1 NC_017660.1 COG2315 Uncharacterized protein conserved in bacteria; ybdF; hypothetical protein 4406420 12760502 KO11_20785 Escherichia coli KO11FL hypothetical protein YP_006166473.1 4406052 D 595495 CDS YP_006166474.1 386702637 12760503 4406514..4407167 1 NC_017660.1 COG0778 Nitroreductase; dihydropteridine reductase 4407167 nfsB 12760503 nfsB Escherichia coli KO11FL dihydropteridine reductase YP_006166474.1 4406514 D 595495 CDS YP_006166475.1 386702638 12760504 4407275..4408522 1 NC_017660.1 COG0668 Small-conductance mechanosensitive channel; putative mechanosensitive channel 4408522 ybdG 12760504 ybdG Escherichia coli KO11FL putative mechanosensitive channel YP_006166475.1 4407275 D 595495 CDS YP_006166476.1 386702639 12760505 complement(4408590..4409966) 1 NC_017660.1 COG1113 Gamma-aminobutyrate permease and related permeases; phenylalanine transporter 4409966 pheP 12760505 pheP Escherichia coli KO11FL phenylalanine transporter YP_006166476.1 4408590 R 595495 CDS YP_006166477.1 386702640 12760506 complement(4410068..4413211) 1 NC_017660.1 COG3696 Putative silver efflux pump; putative cation efflux system protein CusA 4413211 cusA 12760506 cusA Escherichia coli KO11FL putative cation efflux system protein CusA YP_006166477.1 4410068 R 595495 CDS YP_006166478.1 386702641 12760507 complement(4413223..4414446) 1 NC_017660.1 COG0845 Membrane-fusion protein; copper/silver efflux system membrane fusion protein CusB 4414446 cusB 12760507 cusB Escherichia coli KO11FL copper/silver efflux system membrane fusion protein CusB YP_006166478.1 4413223 R 595495 CDS YP_006166479.1 386702642 12760508 complement(4414462..4414794) 1 NC_017660.1 COG5569 Uncharacterized conserved protein; copper-binding protein 4414794 cusF 12760508 cusF Escherichia coli KO11FL copper-binding protein YP_006166479.1 4414462 R 595495 CDS YP_006166480.1 386702643 12760509 complement(4414818..4416200) 1 NC_017660.1 COG1538 Outer membrane protein; copper/silver efflux system outer membrane protein CusC 4416200 cusC 12760509 cusC Escherichia coli KO11FL copper/silver efflux system outer membrane protein CusC YP_006166480.1 4414818 R 595495 CDS YP_006166481.1 386702644 12760510 4416357..4417040 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional activator CusR 4417040 cusR 12760510 cusR Escherichia coli KO11FL DNA-binding transcriptional activator CusR YP_006166481.1 4416357 D 595495 CDS YP_006166482.1 386702645 12760511 4417030..4418478 1 NC_017660.1 COG0642 Signal transduction histidine kinase; sensor kinase CusS 4418478 cusS 12760511 cusS Escherichia coli KO11FL sensor kinase CusS YP_006166482.1 4417030 D 595495 CDS YP_006166483.1 386702646 12760512 4419215..4421116 1 NC_017660.1 COG3501 Uncharacterized protein conserved in bacteria; type VI secretion system Vgr family protein; putative Rhs element Vgr protein 4421116 12760512 KO11_20835 Escherichia coli KO11FL putative Rhs element Vgr protein YP_006166483.1 4419215 D 595495 CDS YP_006166484.1 386702647 12760513 4421144..4421605 1 NC_017660.1 COG5435 Uncharacterized conserved protein; hypothetical protein 4421605 12760513 KO11_20840 Escherichia coli KO11FL hypothetical protein YP_006166484.1 4421144 D 595495 CDS YP_006166485.1 386702648 12760514 4421625..4426445 1 NC_017660.1 COG3209 Rhs family protein; Rhs core protein 4426445 12760514 KO11_20845 Escherichia coli KO11FL Rhs core protein YP_006166485.1 4421625 D 595495 CDS YP_006166486.1 386702649 12760515 4426433..4426972 1 NC_017660.1 hypothetical protein 4426972 12760515 KO11_20850 Escherichia coli KO11FL hypothetical protein YP_006166486.1 4426433 D 595495 CDS YP_006166487.1 386702650 12760516 4427099..4429243 1 NC_017660.1 COG3209 Rhs family protein; putative Rhs core protein 4429243 12760516 KO11_20855 Escherichia coli KO11FL putative Rhs core protein YP_006166487.1 4427099 D 595495 CDS YP_006166488.1 386702651 12760517 4429243..4429656 1 NC_017660.1 COG0222 Ribosomal protein L7/L12; hypothetical protein 4429656 12760517 KO11_20860 Escherichia coli KO11FL hypothetical protein YP_006166488.1 4429243 D 595495 CDS YP_006166489.1 386702652 12760518 4429903..4431702 1 NC_017660.1 COG3209 Rhs family protein; Rhs core protein with extension 4431702 12760518 KO11_20865 Escherichia coli KO11FL Rhs core protein with extension YP_006166489.1 4429903 D 595495 CDS YP_006166490.1 386702653 12760519 4431699..4431950 1 NC_017660.1 hypothetical protein 4431950 12760519 KO11_20870 Escherichia coli KO11FL hypothetical protein YP_006166490.1 4431699 D 595495 CDS YP_006166491.1 386702654 12760520 4432065..4432376 1 NC_017660.1 hypothetical protein 4432376 12760520 KO11_20875 Escherichia coli KO11FL hypothetical protein YP_006166491.1 4432065 D 595495 CDS YP_006166492.1 386702655 12760521 4432480..4433616 1 NC_017660.1 COG5433 Transposase; putative H repeat-associated protein 4433616 yhhI 12760521 yhhI Escherichia coli KO11FL putative H repeat-associated protein YP_006166492.1 4432480 D 595495 CDS YP_006166493.1 386702656 12760522 4433885..4436122 1 NC_017660.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; bacteriophage N4 adsorption protein B 4436122 nfrB2 12760522 nfrB2 Escherichia coli KO11FL bacteriophage N4 adsorption protein B YP_006166493.1 4433885 D 595495 CDS YP_006166494.1 386702657 12760523 4436109..4439081 1 NC_017660.1 COG0457 FOG: TPR repeat; bacteriophage N4 receptor, outer membrane subunit 4439081 nrfA2 12760523 nrfA2 Escherichia coli KO11FL bacteriophage N4 receptor, outer membrane subunit YP_006166494.1 4436109 D 595495 CDS YP_006166495.1 386702658 12760524 4439082..4439972 1 NC_017660.1 ybcH; hypothetical protein 4439972 12760524 KO11_20895 Escherichia coli KO11FL hypothetical protein YP_006166495.1 4439082 D 595495 CDS YP_006166496.1 386702659 12760525 4440155..4440916 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator EnvY 4440916 envY 12760525 envY Escherichia coli KO11FL DNA-binding transcriptional activator EnvY YP_006166496.1 4440155 D 595495 CDS YP_006166497.1 386702660 12760527 4441281..4441913 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator FimZ 4441913 fimZ 12760527 fimZ Escherichia coli KO11FL transcriptional regulator FimZ YP_006166497.1 4441281 D 595495 CDS YP_006166498.1 386702661 12760528 complement(4441916..4442431) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; fimbrial-like adhesin protein SfmF 4442431 sfmF 12760528 sfmF Escherichia coli KO11FL fimbrial-like adhesin protein SfmF YP_006166498.1 4441916 R 595495 CDS YP_006166499.1 386702662 12760529 complement(4442442..4443449) 1 NC_017660.1 fimbrial-like adhesin 4443449 fimH2 12760529 fimH2 Escherichia coli KO11FL fimbrial-like adhesin YP_006166499.1 4442442 R 595495 CDS YP_006166500.1 386702663 12760530 complement(4443462..4443635) 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein FimD 4443635 12760530 KO11_20925 Escherichia coli KO11FL outer membrane usher protein FimD YP_006166500.1 4443462 R 595495 CDS YP_006166501.1 386702664 12760531 complement(4443608..4446070) 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; putative outer membrane export usher protein SfmD 4446070 sfmD 12760531 sfmD Escherichia coli KO11FL putative outer membrane export usher protein SfmD YP_006166501.1 4443608 R 595495 CDS YP_006166502.1 386702665 12760532 complement(4446101..4446793) 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein FimC 4446793 sfmC 12760532 sfmC Escherichia coli KO11FL fimbrial chaperone protein FimC YP_006166502.1 4446101 R 595495 CDS YP_006166503.1 386702666 12760533 complement(4447013..4447555) 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; type-1 fimbrial protein subunit A 4447555 sfmA 12760533 sfmA Escherichia coli KO11FL type-1 fimbrial protein subunit A YP_006166503.1 4447013 R 595495 CDS YP_006166504.1 386702667 12760534 4448036..4448902 1 NC_017660.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 4448902 folD 12760534 folD Escherichia coli KO11FL bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_006166504.1 4448036 D 595495 CDS YP_006166505.1 386702668 12760536 4448904..4449116 1 NC_017660.1 COG2501 Uncharacterized conserved protein; ybcJ; hypothetical protein 4449116 12760536 KO11_20950 Escherichia coli KO11FL hypothetical protein YP_006166505.1 4448904 D 595495 CDS YP_006166506.1 386702669 12760537 4449224..4449745 1 NC_017660.1 COG1988 Predicted membrane-bound metal-dependent hydrolases; inner membrane protein YbcI 4449745 ybcI 12760537 ybcI Escherichia coli KO11FL inner membrane protein YbcI YP_006166506.1 4449224 D 595495 CDS YP_006166507.1 386702670 12760538 complement(4449781..4451166) 1 NC_017660.1 COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 4451166 cysS 12760538 cysS Escherichia coli KO11FL cysteinyl-tRNA synthetase YP_006166507.1 4449781 R 595495 CDS YP_006166508.1 386702671 12760539 4451340..4451834 1 NC_017660.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase B 4451834 ppiB 12760539 ppiB Escherichia coli KO11FL peptidyl-prolyl cis-trans isomerase B YP_006166508.1 4451340 D 595495 CDS YP_006166509.1 386702672 12760540 4451837..4452559 1 NC_017660.1 COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 4452559 lpxH 12760540 lpxH Escherichia coli KO11FL UDP-2,3-diacylglucosamine hydrolase YP_006166509.1 4451837 D 595495 CDS YP_006166510.1 386702673 12760541 4452677..4453186 1 NC_017660.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; phosphoribosylaminoimidazole carboxylase catalytic subunit 4453186 purE 12760541 purE Escherichia coli KO11FL phosphoribosylaminoimidazole carboxylase catalytic subunit YP_006166510.1 4452677 D 595495 CDS YP_006166511.1 386702674 12760542 4453183..4454250 1 NC_017660.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); phosphoribosylaminoimidazole carboxylase ATPase subunit 4454250 purK 12760542 purK Escherichia coli KO11FL phosphoribosylaminoimidazole carboxylase ATPase subunit YP_006166511.1 4453183 D 595495 CDS YP_006166512.1 386702675 12760543 complement(4454387..4455280) 1 NC_017660.1 COG0549 Carbamate kinase; carbamate kinase 4455280 ybcF 12760543 ybcF Escherichia coli KO11FL carbamate kinase YP_006166512.1 4454387 R 595495 CDS YP_006166513.1 386702676 12760544 complement(4455277..4456092) 1 NC_017660.1 ylbF; hypothetical protein 4456092 12760544 KO11_20990 Escherichia coli KO11FL hypothetical protein YP_006166513.1 4455277 R 595495 CDS YP_006166514.1 386702677 12760545 complement(4456103..4457362) 1 NC_017660.1 ylbE; hypothetical protein 4457362 12760545 KO11_20995 Escherichia coli KO11FL hypothetical protein YP_006166514.1 4456103 R 595495 CDS YP_006166515.1 386702678 12760546 complement(4457372..4459039) 1 NC_017660.1 COG0074 Succinyl-CoA synthetase, alpha subunit; membrane protein FdrA 4459039 fdrA 12760546 fdrA Escherichia coli KO11FL membrane protein FdrA YP_006166515.1 4457372 R 595495 CDS YP_006166516.1 386702679 12760547 4459356..4460405 1 NC_017660.1 COG2055 Malate/L-lactate dehydrogenases; ureidoglycolate dehydrogenase 4460405 allD 12760547 allD Escherichia coli KO11FL ureidoglycolate dehydrogenase YP_006166516.1 4459356 D 595495 CDS YP_006166517.1 386702680 12760548 4460427..4461662 1 NC_017660.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; allantoate amidohydrolase 4461662 allC 12760548 allC Escherichia coli KO11FL allantoate amidohydrolase YP_006166517.1 4460427 D 595495 CDS YP_006166518.1 386702681 12760549 4461673..4462458 1 NC_017660.1 COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization; ylbA; hypothetical protein 4462458 12760549 KO11_21015 Escherichia coli KO11FL hypothetical protein YP_006166518.1 4461673 D 595495 CDS YP_006166519.1 386702682 12760550 complement(4462587..4463732) 1 NC_017660.1 COG1929 Glycerate kinase; glycerate kinase 4463732 glxK 12760550 glxK Escherichia coli KO11FL glycerate kinase YP_006166519.1 4462587 R 595495 CDS YP_006166520.1 386702683 12760551 complement(4463754..4465055) 1 NC_017660.1 COG2233 Xanthine/uracil permeases; putative uracil/xanthine transporter 4465055 ybbY 12760551 ybbY Escherichia coli KO11FL putative uracil/xanthine transporter YP_006166520.1 4463754 R 595495 CDS YP_006166521.1 386702684 12760552 complement(4465112..4466473) 1 NC_017660.1 COG0044 Dihydroorotase and related cyclic amidohydrolases; allantoinase 4466473 allB 12760552 allB Escherichia coli KO11FL allantoinase YP_006166521.1 4465112 R 595495 CDS YP_006166522.1 386702685 12760553 complement(4466533..4467987) 1 NC_017660.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases; allantoin permease 4467987 ybbW 12760553 ybbW Escherichia coli KO11FL allantoin permease YP_006166522.1 4466533 R 595495 CDS YP_006166523.1 386702686 12760554 complement(4468156..4469034) 1 NC_017660.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; tartronate semialdehyde reductase 4469034 glxR 12760554 glxR Escherichia coli KO11FL tartronate semialdehyde reductase YP_006166523.1 4468156 R 595495 CDS YP_006166524.1 386702687 12760555 complement(4469134..4469910) 1 NC_017660.1 COG3622 Hydroxypyruvate isomerase; hydroxypyruvate isomerase 4469910 hyi 12760555 hyi Escherichia coli KO11FL hydroxypyruvate isomerase YP_006166524.1 4469134 R 595495 CDS YP_006166525.1 386702688 12760556 complement(4469923..4471704) 1 NC_017660.1 COG3960 Glyoxylate carboligase; glyoxylate carboligase 4471704 gcl 12760556 gcl Escherichia coli KO11FL glyoxylate carboligase YP_006166525.1 4469923 R 595495 CDS YP_006166526.1 386702689 12760557 complement(4471794..4472609) 1 NC_017660.1 COG1414 Transcriptional regulator; DNA-binding transcriptional repressor AllR 4472609 allR 12760557 allR Escherichia coli KO11FL DNA-binding transcriptional repressor AllR YP_006166526.1 4471794 R 595495 CDS YP_006166527.1 386702690 12760558 complement(4472687..4473169) 1 NC_017660.1 COG3194 Ureidoglycolate hydrolase; ureidoglycolate hydrolase 4473169 allA 12760558 allA Escherichia coli KO11FL ureidoglycolate hydrolase YP_006166527.1 4472687 R 595495 CDS YP_006166528.1 386702691 12760559 4473399..4474325 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional activator AllS 4474325 allS 12760559 allS Escherichia coli KO11FL DNA-binding transcriptional activator AllS YP_006166528.1 4473399 D 595495 CDS YP_006166529.1 386702692 12760560 4474394..4475488 1 NC_017660.1 COG2603 Predicted ATPase; tRNA 2-selenouridine synthase 4475488 selU 12760560 selU Escherichia coli KO11FL tRNA 2-selenouridine synthase YP_006166529.1 4474394 D 595495 CDS YP_006166530.1 386702693 12760561 4475604..4475975 1 NC_017660.1 ylbG; hypothetical protein 4475975 12760561 KO11_21075 Escherichia coli KO11FL hypothetical protein YP_006166530.1 4475604 D 595495 CDS YP_006166531.1 386702694 12760562 complement(4476490..4476981) 1 NC_017660.1 ybbD; hypothetical protein 4476981 12760562 KO11_21080 Escherichia coli KO11FL hypothetical protein YP_006166531.1 4476490 R 595495 CDS YP_006166532.1 386702695 12760563 complement(4476962..4477672) 1 NC_017660.1 COG3209 Rhs family protein; ylbH; hypothetical protein 4477672 12760563 KO11_21085 Escherichia coli KO11FL hypothetical protein YP_006166532.1 4476962 R 595495 CDS YP_006166533.1 386702696 12760564 complement(4477672..4478040) 1 NC_017660.1 ybbC; hypothetical protein 4478040 12760564 KO11_21090 Escherichia coli KO11FL hypothetical protein YP_006166533.1 4477672 R 595495 CDS YP_006166534.1 386702697 12760565 complement(4478080..4482369) 1 NC_017660.1 COG3209 Rhs family protein; matches E coli K-12 rhsD; Rhs core protein 4482369 rhsW2 12760565 rhsW2 Escherichia coli KO11FL Rhs core protein YP_006166534.1 4478080 R 595495 CDS YP_006166535.1 386702698 12760566 complement(4482799..4485213) 1 NC_017660.1 COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component; putative inner membrane protein 4485213 ybbP 12760566 ybbP Escherichia coli KO11FL putative inner membrane protein YP_006166535.1 4482799 R 595495 CDS YP_006166536.1 386702699 12760567 complement(4485210..4485896) 1 NC_017660.1 COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; putative ABC transporter ATP-binding protein YbbA 4485896 ybbA 12760567 ybbA Escherichia coli KO11FL putative ABC transporter ATP-binding protein YbbA YP_006166536.1 4485210 R 595495 CDS YP_006166537.1 386702700 12760568 4485864..4486490 1 NC_017660.1 COG2755 Lysophospholipase L1 and related esterases; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 4486490 tesA 12760568 tesA Escherichia coli KO11FL multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 YP_006166537.1 4485864 D 595495 CDS YP_006166538.1 386702701 12760569 4486480..4487289 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 4487289 ybbO 12760569 ybbO Escherichia coli KO11FL oxidoreductase YP_006166538.1 4486480 D 595495 CDS YP_006166539.1 386702702 12760570 4487350..4488204 1 NC_017660.1 COG3118 Thioredoxin domain-containing protein; putative thioredoxin-like protein 4488204 ybbN 12760570 ybbN Escherichia coli KO11FL putative thioredoxin-like protein YP_006166539.1 4487350 D 595495 CDS YP_006166540.1 386702703 12760571 complement(4488267..4489046) 1 NC_017660.1 COG0390 ABC-type uncharacterized transport system, permease component; putative metal resistance protein 4489046 ybbM 12760571 ybbM Escherichia coli KO11FL putative metal resistance protein YP_006166540.1 4488267 R 595495 CDS YP_006166541.1 386702704 12760572 complement(4489033..4489710) 1 NC_017660.1 COG4619 ABC-type uncharacterized transport system, ATPase component; putative ABC transporter ATP-binding protein YbbL 4489710 ybbL 12760572 ybbL Escherichia coli KO11FL putative ABC transporter ATP-binding protein YbbL YP_006166541.1 4489033 R 595495 CDS YP_006166542.1 386702705 12760573 4489856..4490773 1 NC_017660.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; putative protease 4490773 ybbK 12760573 ybbK Escherichia coli KO11FL putative protease YP_006166542.1 4489856 D 595495 CDS YP_006166543.1 386702706 12760574 4490770..4491228 1 NC_017660.1 COG1585 Membrane protein implicated in regulation of membrane protease activity; hypothetical protein 4491228 ybbJ 12760574 ybbJ Escherichia coli KO11FL hypothetical protein YP_006166543.1 4490770 D 595495 CDS YP_006166544.1 386702707 12760575 complement(4491229..4491636) 1 NC_017660.1 COG0789 Predicted transcriptional regulators; DNA-binding transcriptional regulator CueR 4491636 cueR 12760575 cueR Escherichia coli KO11FL DNA-binding transcriptional regulator CueR YP_006166544.1 4491229 R 595495 CDS YP_006166545.1 386702708 12760576 complement(4491761..4493053) 1 NC_017660.1 COG0531 Amino acid transporters; amino acid permease 4493053 ybaT 12760576 ybaT Escherichia coli KO11FL amino acid permease YP_006166545.1 4491761 R 595495 CDS YP_006166546.1 386702709 12760577 complement(4493056..4493988) 1 NC_017660.1 COG2066 Glutaminase; glutaminase 4493988 ybaS 12760577 ybaS Escherichia coli KO11FL glutaminase YP_006166546.1 4493056 R 595495 CDS YP_006166547.1 386702710 12760578 4494250..4496754 1 NC_017660.1 COG2217 Cation transport ATPase; copper exporting ATPase 4496754 copA 12760578 copA Escherichia coli KO11FL copper exporting ATPase YP_006166547.1 4494250 D 595495 CDS YP_006166548.1 386702711 12760579 complement(4496868..4497209) 1 NC_017660.1 COG3093 Plasmid maintenance system antidote protein; ybaQ; hypothetical protein 4497209 12760579 KO11_21165 Escherichia coli KO11FL hypothetical protein YP_006166548.1 4496868 R 595495 CDS YP_006166549.1 386702712 12760580 4497347..4498141 1 NC_017660.1 COG3735 Uncharacterized protein conserved in bacteria; ybaP; hypothetical protein 4498141 12760580 KO11_21170 Escherichia coli KO11FL hypothetical protein YP_006166549.1 4497347 D 595495 CDS YP_006166550.1 386702713 12760581 4498345..4498824 1 NC_017660.1 COG2606 Uncharacterized conserved protein; ybaK; hypothetical protein 4498824 12760581 KO11_21175 Escherichia coli KO11FL hypothetical protein YP_006166550.1 4498345 D 595495 CDS YP_006166551.1 386702714 12760582 complement(4498861..4500513) 1 NC_017660.1 COG0737 5-nucleotidase/2,3-cyclic phosphodiesterase and related esterases; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 4500513 ushA 12760582 ushA Escherichia coli KO11FL bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_006166551.1 4498861 R 595495 CDS YP_006166552.1 386702715 12760583 4500731..4501951 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; fosmidomycin efflux system, member of the major facilitator superfamily protein 4501951 fsr 12760583 fsr Escherichia coli KO11FL fosmidomycin efflux system, member of the major facilitator superfamily protein YP_006166552.1 4500731 D 595495 CDS YP_006166553.1 386702716 12760584 4502189..4503865 1 NC_017660.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component; putative cation:proton antiport protein 4503865 ybaL 12760584 ybaL Escherichia coli KO11FL putative cation:proton antiport protein YP_006166553.1 4502189 D 595495 CDS YP_006166554.1 386702717 12760585 complement(4503998..4505302) 1 NC_017660.1 COG0524 Sugar kinases, ribokinase family; inosine/guanosine kinase 4505302 gsk 12760585 gsk Escherichia coli KO11FL inosine/guanosine kinase YP_006166554.1 4503998 R 595495 CDS YP_006166555.1 386702718 12760586 4505454..4506413 1 NC_017660.1 acetyl esterase 4506413 aes 12760586 aes Escherichia coli KO11FL acetyl esterase YP_006166555.1 4505454 D 595495 CDS YP_006166556.1 386702719 12760587 complement(4506410..4507372) 1 NC_017660.1 COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase 4507372 hemH 12760587 hemH Escherichia coli KO11FL ferrochelatase YP_006166556.1 4506410 R 595495 CDS YP_006166557.1 386702720 12760588 complement(4507608..4508252) 1 NC_017660.1 COG0563 Adenylate kinase and related kinases; adenylate kinase 4508252 adk 12760588 adk Escherichia coli KO11FL adenylate kinase YP_006166557.1 4507608 R 595495 CDS YP_006166558.1 386702721 12760589 complement(4508433..4510307) 1 NC_017660.1 COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 4510307 htpB 12760589 htpB Escherichia coli KO11FL heat shock protein 90 YP_006166558.1 4508433 R 595495 CDS YP_006166559.1 386702722 12760590 complement(4510417..4511022) 1 NC_017660.1 COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 4511022 recR 12760590 recR Escherichia coli KO11FL recombination protein RecR YP_006166559.1 4510417 R 595495 CDS YP_006166560.1 386702723 12760591 complement(4511022..4511351) 1 NC_017660.1 COG0718 Uncharacterized protein conserved in bacteria; ybaB; hypothetical protein 4511351 12760591 KO11_21225 Escherichia coli KO11FL hypothetical protein YP_006166560.1 4511022 R 595495 CDS YP_006166561.1 386702724 12760592 complement(4511404..4513335) 1 NC_017660.1 COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau 4513335 dnaX 12760592 dnaX Escherichia coli KO11FL DNA polymerase III subunits gamma and tau YP_006166561.1 4511404 R 595495 CDS YP_006166562.1 386702725 12760593 complement(4513464..4514015) 1 NC_017660.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase 4514015 apt 12760593 apt Escherichia coli KO11FL adenine phosphoribosyltransferase YP_006166562.1 4513464 R 595495 CDS YP_006166563.1 386702726 12760594 complement(4514168..4514545) 1 NC_017660.1 COG2832 Uncharacterized protein conserved in bacteria; ybaN; hypothetical protein 4514545 12760594 KO11_21240 Escherichia coli KO11FL hypothetical protein YP_006166563.1 4514168 R 595495 CDS YP_006166564.1 386702727 12760595 4514615..4515142 1 NC_017660.1 COG3923 Primosomal replication protein N; primosomal replication protein N'' 4515142 priC 12760595 priC Escherichia coli KO11FL primosomal replication protein N'' YP_006166564.1 4514615 D 595495 CDS YP_006166565.1 386702728 12760596 4515156..4515317 1 NC_017660.1 ybaM; hypothetical protein 4515317 12760596 KO11_21250 Escherichia coli KO11FL hypothetical protein YP_006166565.1 4515156 D 595495 CDS YP_006166566.1 386702729 12760597 complement(4515529..4518891) 1 NC_017660.1 COG3264 Small-conductance mechanosensitive channel; kefA; hypothetical protein 4518891 12760597 KO11_21255 Escherichia coli KO11FL hypothetical protein YP_006166566.1 4515529 R 595495 CDS YP_006166567.1 386702730 12760598 complement(4519019..4519666) 1 NC_017660.1 COG1309 Transcriptional regulator; DNA-binding transcriptional repressor AcrR 4519666 acrR 12760598 acrR Escherichia coli KO11FL DNA-binding transcriptional repressor AcrR YP_006166567.1 4519019 R 595495 CDS YP_006166568.1 386702731 12760599 4519808..4521001 1 NC_017660.1 COG0845 Membrane-fusion protein; multidrug efflux system transporter AcrA 4521001 acrA 12760599 acrA Escherichia coli KO11FL multidrug efflux system transporter AcrA YP_006166568.1 4519808 D 595495 CDS YP_006166569.1 386702732 12760600 4521024..4524173 1 NC_017660.1 COG0841 Cation/multidrug efflux pump; multidrug efflux system protein AcrB 4524173 acrB 12760600 acrB Escherichia coli KO11FL multidrug efflux system protein AcrB YP_006166569.1 4521024 D 595495 CDS YP_006166570.1 386702733 12760601 4524719..4525093 1 NC_017660.1 Hha toxicity attenuator 4525093 tomB 12760601 tomB Escherichia coli KO11FL Hha toxicity attenuator YP_006166570.1 4524719 D 595495 CDS YP_006166571.1 386702734 12760602 4525119..4525337 1 NC_017660.1 modulator of gene expression, with H-NS 4525337 hha 12760602 hha Escherichia coli KO11FL modulator of gene expression, with H-NS YP_006166571.1 4525119 D 595495 CDS YP_006166572.1 386702735 12760603 4525509..4526060 1 NC_017660.1 COG0110 Acetyltransferase (isoleucine patch superfamily); maltose O-acetyltransferase 4526060 maa 12760603 maa Escherichia coli KO11FL maltose O-acetyltransferase YP_006166572.1 4525509 D 595495 CDS YP_006166573.1 386702736 12760604 4526176..4526646 1 NC_017660.1 ylaC; hypothetical protein 4526646 12760604 KO11_21290 Escherichia coli KO11FL hypothetical protein YP_006166573.1 4526176 D 595495 CDS YP_006166574.1 386702737 12760605 4526810..4528360 1 NC_017660.1 COG4943 Predicted signal transduction protein containing sensor and EAL domains; ylaB; hypothetical protein 4528360 12760605 KO11_21295 Escherichia coli KO11FL hypothetical protein YP_006166574.1 4526810 D 595495 CDS YP_006166575.1 386702738 12760606 complement(4528402..4528755) 1 NC_017660.1 COG5507 Uncharacterized conserved protein; ybaA; hypothetical protein 4528755 12760606 KO11_21300 Escherichia coli KO11FL hypothetical protein YP_006166575.1 4528402 R 595495 CDS YP_006166576.1 386702739 12760607 4529134..4529445 1 NC_017660.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase; methylated-DNA-[protein]-cysteine S-methyltransferase 4529445 ybaZ 12760607 ybaZ Escherichia coli KO11FL methylated-DNA-[protein]-cysteine S-methyltransferase YP_006166576.1 4529134 D 595495 CDS YP_006166577.1 386702740 12760608 complement(4529476..4530048) 1 NC_017660.1 COG3126 Uncharacterized protein conserved in bacteria; putative lipoprotein 4530048 ybaY 12760608 ybaY Escherichia coli KO11FL putative lipoprotein YP_006166577.1 4529476 R 595495 CDS YP_006166578.1 386702741 12760609 4530266..4531126 1 NC_017660.1 COG1946 Acyl-CoA thioesterase; acyl-CoA thioesterase II 4531126 tesB 12760609 tesB Escherichia coli KO11FL acyl-CoA thioesterase II YP_006166578.1 4530266 D 595495 CDS YP_006166579.1 386702742 12760610 complement(4531174..4532460) 1 NC_017660.1 COG0004 Ammonia permease; ammonium transporter 4532460 amtB 12760610 amtB Escherichia coli KO11FL ammonium transporter YP_006166579.1 4531174 R 595495 CDS YP_006166580.1 386702743 12760611 complement(4532490..4532828) 1 NC_017660.1 COG0347 Nitrogen regulatory protein PII; glutamine synthetase 4532828 glnK 12760611 glnK Escherichia coli KO11FL glutamine synthetase YP_006166580.1 4532490 R 595495 CDS YP_006166581.1 386702744 12760612 complement(4533009..4534790) 1 NC_017660.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; putative multidrug transporter membrane/ATP-binding components 4534790 mdlB 12760612 mdlB Escherichia coli KO11FL putative multidrug transporter membrane/ATP-binding components YP_006166581.1 4533009 R 595495 CDS YP_006166582.1 386702745 12760613 complement(4534783..4536555) 1 NC_017660.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; putative multidrug transporter membrane/ATP-binding components 4536555 mdlA 12760613 mdlA Escherichia coli KO11FL putative multidrug transporter membrane/ATP-binding components YP_006166582.1 4534783 R 595495 CDS YP_006166583.1 386702746 12760614 complement(4536585..4537043) 1 NC_017660.1 COG1522 Transcriptional regulators; putative LRP-like transcriptional regulator 4537043 ybaO 12760614 ybaO Escherichia coli KO11FL putative LRP-like transcriptional regulator YP_006166583.1 4536585 R 595495 CDS YP_006166584.1 386702747 12760615 complement(4537196..4538014) 1 NC_017660.1 COG0561 Predicted hydrolases of the HAD superfamily; thiamin pyrimidine pyrophosphate hydrolase 4538014 cof 12760615 cof Escherichia coli KO11FL thiamin pyrimidine pyrophosphate hydrolase YP_006166584.1 4537196 R 595495 CDS YP_006166585.1 386702748 12760616 4538114..4539814 1 NC_017660.1 COG4533 ABC-type uncharacterized transport system, periplasmic component; putative transporter subunit 4539814 ybaE 12760616 ybaE Escherichia coli KO11FL putative transporter subunit YP_006166585.1 4538114 D 595495 CDS YP_006166586.1 386702749 12760617 4539879..4540574 1 NC_017660.1 COG0603 Predicted PP-loop superfamily ATPase; queuosine biosynthesis protein QueC 4540574 queC 12760617 queC Escherichia coli KO11FL queuosine biosynthesis protein QueC YP_006166586.1 4539879 D 595495 CDS YP_006166587.1 386702750 12760618 complement(4540626..4541024) 1 NC_017660.1 COG0824 Predicted thioesterase; thioesterase superfamily protein 4541024 fadM 12760618 fadM Escherichia coli KO11FL thioesterase superfamily protein YP_006166587.1 4540626 R 595495 CDS YP_006166588.1 386702751 12760619 complement(4541118..4541489) 1 NC_017660.1 COG1555 DNA uptake protein and related DNA-binding proteins; ybaV; hypothetical protein 4541489 12760619 KO11_21365 Escherichia coli KO11FL hypothetical protein YP_006166588.1 4541118 R 595495 CDS YP_006166589.1 386702752 12760620 complement(4541640..4543511) 1 NC_017660.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; chaperone 4543511 ppiD 12760620 ppiD Escherichia coli KO11FL chaperone YP_006166589.1 4541640 R 595495 CDS YP_006166590.1 386702753 12760621 complement(4543703..4543975) 1 NC_017660.1 COG0776 Bacterial nucleoid DNA-binding protein; transcriptional regulator HU subunit beta 4543975 hupB 12760621 hupB Escherichia coli KO11FL transcriptional regulator HU subunit beta YP_006166590.1 4543703 R 595495 CDS YP_006166591.1 386702754 12760622 complement(4544184..4546538) 1 NC_017660.1 COG0466 ATP-dependent Lon protease, bacterial type; DNA-binding ATP-dependent protease La 4546538 lon 12760622 lon Escherichia coli KO11FL DNA-binding ATP-dependent protease La YP_006166591.1 4544184 R 595495 CDS YP_006166592.1 386702755 12760623 complement(4546726..4548000) 1 NC_017660.1 COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX 4548000 clpX 12760623 clpX Escherichia coli KO11FL ATP-dependent protease ATP-binding subunit ClpX YP_006166592.1 4546726 R 595495 CDS YP_006166593.1 386702756 12760624 complement(4548126..4548749) 1 NC_017660.1 COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit 4548749 clpP 12760624 clpP Escherichia coli KO11FL ATP-dependent Clp protease proteolytic subunit YP_006166593.1 4548126 R 595495 CDS YP_006166594.1 386702757 12760625 complement(4548995..4550293) 1 NC_017660.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor 4550293 tig 12760625 tig Escherichia coli KO11FL trigger factor YP_006166594.1 4548995 R 595495 CDS YP_006166595.1 386702758 12760626 complement(4550440..4550628) 1 NC_017660.1 hypothetical protein 4550628 12760626 KO11_21405 Escherichia coli KO11FL hypothetical protein YP_006166595.1 4550440 R 595495 CDS YP_006166596.1 386702759 12760627 complement(4550637..4550954) 1 NC_017660.1 COG0271 Stress-induced morphogen (activity unknown); transcriptional regulator BolA 4550954 bolA 12760627 bolA Escherichia coli KO11FL transcriptional regulator BolA YP_006166596.1 4550637 R 595495 CDS YP_006166597.1 386702760 12760628 4551259..4551837 1 NC_017660.1 COG3056 Uncharacterized lipoprotein; yajG; hypothetical protein 4551837 12760628 KO11_21415 Escherichia coli KO11FL hypothetical protein YP_006166597.1 4551259 D 595495 CDS YP_006166598.1 386702761 12760629 4551881..4553356 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; muropeptide transporter 4553356 ampG 12760629 ampG Escherichia coli KO11FL muropeptide transporter YP_006166598.1 4551881 D 595495 CDS YP_006166599.1 386702762 12760630 4553816..4554763 1 NC_017660.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2; cytochrome o ubiquinol oxidase subunit II 4554763 cyoA 12760630 cyoA Escherichia coli KO11FL cytochrome o ubiquinol oxidase subunit II YP_006166599.1 4553816 D 595495 CDS YP_006166600.1 386702763 12760631 4554785..4556776 1 NC_017660.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; cytochrome o ubiquinol oxidase subunit I 4556776 cyoB 12760631 cyoB Escherichia coli KO11FL cytochrome o ubiquinol oxidase subunit I YP_006166600.1 4554785 D 595495 CDS YP_006166601.1 386702764 12760632 4556865..4557380 1 NC_017660.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3; cytochrome o ubiquinol oxidase subunit III 4557380 cyoC 12760632 cyoC Escherichia coli KO11FL cytochrome o ubiquinol oxidase subunit III YP_006166601.1 4556865 D 595495 CDS YP_006166602.1 386702765 12760633 4557380..4557709 1 NC_017660.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4; cytochrome o ubiquinol oxidase subunit IV 4557709 cyoD 12760633 cyoD Escherichia coli KO11FL cytochrome o ubiquinol oxidase subunit IV YP_006166602.1 4557380 D 595495 CDS YP_006166603.1 386702766 12760634 4557721..4558611 1 NC_017660.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); protoheme IX farnesyltransferase 4558611 cyoE 12760634 cyoE Escherichia coli KO11FL protoheme IX farnesyltransferase YP_006166603.1 4557721 D 595495 CDS YP_006166604.1 386702767 12760635 4558796..4559107 1 NC_017660.1 COG4453 Uncharacterized protein conserved in bacteria; hypothetical protein 4559107 12760635 KO11_21450 Escherichia coli KO11FL hypothetical protein YP_006166604.1 4558796 D 595495 CDS YP_006166605.1 386702768 12760636 4559091..4559633 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 4559633 12760636 KO11_21455 Escherichia coli KO11FL hypothetical protein YP_006166605.1 4559091 D 595495 CDS YP_006166606.1 386702769 12760637 complement(4559867..4560583) 1 NC_017660.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 4560583 12760637 KO11_21460 Escherichia coli KO11FL hypothetical protein YP_006166606.1 4559867 R 595495 CDS YP_006166607.1 386702770 12760638 4561021..4562385 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transport protein 4562385 yajR 12760638 yajR Escherichia coli KO11FL putative transport protein YP_006166607.1 4561021 D 595495 CDS YP_006166608.1 386702771 12760639 complement(4562513..4563004) 1 NC_017660.1 COG1666 Uncharacterized protein conserved in bacteria; putative nucleotide-binding protein 4563004 yajQ 12760639 yajQ Escherichia coli KO11FL putative nucleotide-binding protein YP_006166608.1 4562513 R 595495 CDS YP_006166609.1 386702772 12760640 4563172..4564083 1 NC_017660.1 COG1893 Ketopantoate reductase; 2-dehydropantoate 2-reductase 4564083 panE 12760640 panE Escherichia coli KO11FL 2-dehydropantoate 2-reductase YP_006166609.1 4563172 D 595495 CDS YP_006166610.1 386702773 12760641 4564046..4564636 1 NC_017660.1 COG0693 Putative intracellular protease/amidase; oxidative-stress-resistance chaperone 4564636 yajL 12760641 yajL Escherichia coli KO11FL oxidative-stress-resistance chaperone YP_006166610.1 4564046 D 595495 CDS YP_006166611.1 386702774 12760642 complement(4564690..4566138) 1 NC_017660.1 COG0301 Thiamine biosynthesis ATP pyrophosphatase; tRNA s(4)U8 sulfurtransferase 4566138 thiI 12760642 thiI Escherichia coli KO11FL tRNA s(4)U8 sulfurtransferase YP_006166611.1 4564690 R 595495 CDS YP_006166612.1 386702775 12760643 4566344..4566586 1 NC_017660.1 COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 4566586 xseB 12760643 xseB Escherichia coli KO11FL exodeoxyribonuclease VII small subunit YP_006166612.1 4566344 D 595495 CDS YP_006166613.1 386702776 12760644 4566586..4567485 1 NC_017660.1 COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 4567485 ispA 12760644 ispA Escherichia coli KO11FL geranyltranstransferase YP_006166613.1 4566586 D 595495 CDS YP_006166614.1 386702777 12760645 4567510..4569372 1 NC_017660.1 COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 4569372 dxs 12760645 dxs Escherichia coli KO11FL 1-deoxy-D-xylulose-5-phosphate synthase YP_006166614.1 4567510 D 595495 CDS YP_006166615.1 386702778 12760646 4569552..4570526 1 NC_017660.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative oxidoreductase 4570526 yajO 12760646 yajO Escherichia coli KO11FL putative oxidoreductase YP_006166615.1 4569552 D 595495 CDS YP_006166616.1 386702779 12760647 complement(4570580..4571098) 1 NC_017660.1 COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A 4571098 pgpA 12760647 pgpA Escherichia coli KO11FL phosphatidylglycerophosphatase A YP_006166616.1 4570580 R 595495 CDS YP_006166617.1 386702780 12760648 complement(4571076..4572053) 1 NC_017660.1 COG0611 Thiamine monophosphate kinase; thiamine monophosphate kinase 4572053 thiL 12760648 thiL Escherichia coli KO11FL thiamine monophosphate kinase YP_006166617.1 4571076 R 595495 CDS YP_006166618.1 386702781 12760649 complement(4572131..4572550) 1 NC_017660.1 COG0781 Transcription termination factor; transcription antitermination protein NusB 4572550 nusB 12760649 nusB Escherichia coli KO11FL transcription antitermination protein NusB YP_006166618.1 4572131 R 595495 CDS YP_006166619.1 386702782 12760650 complement(4572570..4573040) 1 NC_017660.1 COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase 4573040 ribE 12760650 ribE Escherichia coli KO11FL 6,7-dimethyl-8-ribityllumazine synthase YP_006166619.1 4572570 R 595495 CDS YP_006166620.1 386702783 12760651 complement(4573129..4574214) 1 NC_017660.1 COG0117 Pyrimidine deaminase; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 4574214 ribD 12760651 ribD Escherichia coli KO11FL bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YP_006166620.1 4573129 R 595495 CDS YP_006166621.1 386702784 12760652 complement(4574236..4574685) 1 NC_017660.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains; transcriptional regulator NrdR 4574685 nrdR 12760652 nrdR Escherichia coli KO11FL transcriptional regulator NrdR YP_006166621.1 4574236 R 595495 CDS YP_006166622.1 386702785 12760653 4574836..4575375 1 NC_017660.1 yajI; hypothetical protein 4575375 12760653 KO11_21540 Escherichia coli KO11FL hypothetical protein YP_006166622.1 4574836 D 595495 CDS YP_006166623.1 386702786 12760654 4575674..4576558 1 NC_017660.1 COG3248 Nucleoside-binding outer membrane protein; nucleoside-specific channel-forming protein Tsx 4576558 tsx 12760654 tsx Escherichia coli KO11FL nucleoside-specific channel-forming protein Tsx YP_006166623.1 4575674 D 595495 CDS YP_006166624.1 386702787 12760655 complement(4576735..4577082) 1 NC_017660.1 COG1403 Restriction endonuclease; yajD; hypothetical protein 4577082 12760655 KO11_21555 Escherichia coli KO11FL hypothetical protein YP_006166624.1 4576735 R 595495 CDS YP_006166625.1 386702788 12760656 complement(4577211..4578182) 1 NC_017660.1 COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF 4578182 secF 12760656 secF Escherichia coli KO11FL preprotein translocase subunit SecF YP_006166625.1 4577211 R 595495 CDS YP_006166626.1 386702789 12760657 complement(4578193..4580007) 1 NC_017660.1 COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD 4580007 secD 12760657 secD Escherichia coli KO11FL preprotein translocase subunit SecD YP_006166626.1 4578193 R 595495 CDS YP_006166627.1 386702790 12760658 complement(4580068..4580400) 1 NC_017660.1 COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 4580400 yajC 12760658 yajC Escherichia coli KO11FL preprotein translocase subunit YajC YP_006166627.1 4580068 R 595495 CDS YP_006166628.1 386702791 12760659 complement(4580423..4581550) 1 NC_017660.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 4581550 tgt 12760659 tgt Escherichia coli KO11FL queuine tRNA-ribosyltransferase YP_006166628.1 4580423 R 595495 CDS YP_006166629.1 386702792 12760660 complement(4581606..4582676) 1 NC_017660.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase 4582676 queA 12760660 queA Escherichia coli KO11FL S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_006166629.1 4581606 R 595495 CDS YP_006166630.1 386702793 12760661 4582769..4583350 1 NC_017660.1 COG3124 Uncharacterized protein conserved in bacteria; acyl carrier protein phosphodiesterase 4583350 acpH 12760661 acpH Escherichia coli KO11FL acyl carrier protein phosphodiesterase YP_006166630.1 4582769 D 595495 CDS YP_006166631.1 386702794 12760662 complement(4583355..4585169) 1 NC_017660.1 COG0366 Glycosidases; maltodextrin glucosidase 4585169 malZ 12760662 malZ Escherichia coli KO11FL maltodextrin glucosidase YP_006166631.1 4583355 R 595495 CDS YP_006166632.1 386702795 12760663 complement(4585328..4586701) 1 NC_017660.1 COG1113 Gamma-aminobutyrate permease and related permeases; putative proline-specific permease 4586701 proY 12760663 proY Escherichia coli KO11FL putative proline-specific permease YP_006166632.1 4585328 R 595495 CDS YP_006166633.1 386702796 12760664 complement(4586777..4588096) 1 NC_017660.1 COG1114 Branched-chain amino acid permeases; branched-chain amino acid transport system 2 carrier protein BrnQ 4588096 brnQ 12760664 brnQ Escherichia coli KO11FL branched-chain amino acid transport system 2 carrier protein BrnQ YP_006166633.1 4586777 R 595495 CDS YP_006166634.1 386702797 12760665 complement(4588503..4589798) 1 NC_017660.1 COG0642 Signal transduction histidine kinase; phosphate regulon sensor protein 4589798 phoR 12760665 phoR Escherichia coli KO11FL phosphate regulon sensor protein YP_006166634.1 4588503 R 595495 CDS YP_006166635.1 386702798 12760666 complement(4589856..4590545) 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator PhoB 4590545 phoB 12760666 phoB Escherichia coli KO11FL transcriptional regulator PhoB YP_006166635.1 4589856 R 595495 CDS YP_006166636.1 386702799 12760667 4590735..4591937 1 NC_017660.1 COG0420 DNA repair exonuclease; exonuclease subunit SbcD 4591937 sbcD 12760667 sbcD Escherichia coli KO11FL exonuclease subunit SbcD YP_006166636.1 4590735 D 595495 CDS YP_006166637.1 386702800 12760668 4591934..4595077 1 NC_017660.1 COG0419 ATPase involved in DNA repair; exonuclease subunit SbcC 4595077 sbcC 12760668 sbcC Escherichia coli KO11FL exonuclease subunit SbcC YP_006166637.1 4591934 D 595495 CDS YP_006166638.1 386702801 12760669 4595119..4596387 1 NC_017660.1 COG2814 Arabinose efflux permease; MFS transport protein AraJ 4596387 araJ 12760669 araJ Escherichia coli KO11FL MFS transport protein AraJ YP_006166638.1 4595119 D 595495 CDS YP_006166639.1 386702802 12760670 complement(4596530..4597438) 1 NC_017660.1 COG1940 Transcriptional regulator/sugar kinase; fructokinase 4597438 mak 12760670 mak Escherichia coli KO11FL fructokinase YP_006166639.1 4596530 R 595495 CDS YP_006166640.1 386702803 12760671 4597563..4598474 1 NC_017660.1 COG2974 DNA recombination-dependent growth factor C; putative exonuclease RdgC 4598474 rdgC 12760671 rdgC Escherichia coli KO11FL putative exonuclease RdgC YP_006166640.1 4597563 D 595495 CDS YP_006166641.1 386702804 12760672 complement(4598632..4598913) 1 NC_017660.1 ykiA; hypothetical protein 4598913 12760672 KO11_21640 Escherichia coli KO11FL hypothetical protein YP_006166641.1 4598632 R 595495 CDS YP_006166642.1 386702805 12760673 complement(4599121..4599405) 1 NC_017660.1 COG3123 Uncharacterized protein conserved in bacteria; yaiE; hypothetical protein 4599405 12760673 KO11_21645 Escherichia coli KO11FL hypothetical protein YP_006166642.1 4599121 R 595495 CDS YP_006166643.1 386702806 12760674 complement(4599477..4600154) 1 NC_017660.1 aroM; hypothetical protein 4600154 12760674 KO11_21650 Escherichia coli KO11FL hypothetical protein YP_006166643.1 4599477 R 595495 CDS YP_006166644.1 386702807 12760675 complement(4600412..4600603) 1 NC_017660.1 yaiA; hypothetical protein 4600603 12760675 KO11_21655 Escherichia coli KO11FL hypothetical protein YP_006166644.1 4600412 R 595495 CDS YP_006166645.1 386702808 12760676 complement(4600653..4601177) 1 NC_017660.1 COG0703 Shikimate kinase; shikimate kinase 4601177 aroL 12760676 aroL Escherichia coli KO11FL shikimate kinase YP_006166645.1 4600653 R 595495 CDS YP_006166646.1 386702809 12760677 complement(4601360..4601818) 1 NC_017660.1 COG1671 Uncharacterized protein conserved in bacteria; yaiI; hypothetical protein 4601818 12760677 KO11_21665 Escherichia coli KO11FL hypothetical protein YP_006166646.1 4601360 R 595495 CDS YP_006166647.1 386702810 12760678 4601938..4602747 1 NC_017660.1 COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 4602747 proC 12760678 proC Escherichia coli KO11FL pyrroline-5-carboxylate reductase YP_006166647.1 4601938 D 595495 CDS YP_006166648.1 386702811 12760679 complement(4602764..4603879) 1 NC_017660.1 COG2199 FOG: GGDEF domain; diguanylate cyclase AdrA 4603879 adrA 12760679 adrA Escherichia coli KO11FL diguanylate cyclase AdrA YP_006166648.1 4602764 R 595495 CDS YP_006166649.1 386702812 12760680 complement(4603981..4604301) 1 NC_017660.1 psiF; hypothetical protein 4604301 12760680 KO11_21680 Escherichia coli KO11FL hypothetical protein YP_006166649.1 4603981 R 595495 CDS YP_006166650.1 386702813 12760681 complement(4604420..4605712) 1 NC_017660.1 COG1785 Alkaline phosphatase; disrupted by IS10 insertion; alkaline phosphatase 4605712 phoA_2 12760681 phoA_2 Escherichia coli KO11FL alkaline phosphatase YP_006166650.1 4604420 R 595495 CDS YP_006166651.1 386702814 12760682 4605785..4606993 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; IS10R transposase 4606993 12760682 KO11_21690 Escherichia coli KO11FL IS10R transposase YP_006166651.1 4605785 D 595495 CDS YP_006166652.1 386702815 12760683 complement(4607003..4607173) 1 NC_017660.1 COG1785 Alkaline phosphatase; disrupted by IS10 insertion; alkaline phosphatase 4607173 phoA_1 12760683 phoA_1 Escherichia coli KO11FL alkaline phosphatase YP_006166652.1 4607003 R 595495 CDS YP_006166653.1 386702816 12760684 complement(4607274..4607534) 1 NC_017660.1 anti-RssB factor 4607534 iraP 12760684 iraP Escherichia coli KO11FL anti-RssB factor YP_006166653.1 4607274 R 595495 CDS YP_006166654.1 386702817 12760685 4607997..4609091 1 NC_017660.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 4609091 ddlA 12760685 ddlA Escherichia coli KO11FL D-alanyl-alanine synthetase A YP_006166654.1 4607997 D 595495 CDS YP_006166655.1 386702818 12760686 complement(4609115..4609327) 1 NC_017660.1 yaiZ; hypothetical protein 4609327 12760686 KO11_21715 Escherichia coli KO11FL hypothetical protein YP_006166655.1 4609115 R 595495 CDS YP_006166656.1 386702819 12760687 4609587..4609895 1 NC_017660.1 Inner membrane protein yaiY 4609895 yaiY 12760687 yaiY Escherichia coli KO11FL Inner membrane protein yaiY YP_006166656.1 4609587 D 595495 CDS YP_006166657.1 386702820 12760688 complement(4609954..4611048) 1 NC_017660.1 yaiW; hypothetical protein 4611048 12760688 KO11_21725 Escherichia coli KO11FL hypothetical protein YP_006166657.1 4609954 R 595495 CDS YP_006166658.1 386702821 12760689 complement(4611061..4612281) 1 NC_017660.1 COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components; microcin B17 transporter 4612281 sbmA 12760689 sbmA Escherichia coli KO11FL microcin B17 transporter YP_006166658.1 4611061 R 595495 CDS YP_006166659.1 386702822 12760690 4612633..4613790 1 NC_017660.1 COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactam binding protein AmpH 4613790 ampH 12760690 ampH Escherichia coli KO11FL beta-lactam binding protein AmpH YP_006166659.1 4612633 D 595495 CDS YP_006166660.1 386702823 12760691 complement(4613791..4614414) 1 NC_017660.1 COG2186 Transcriptional regulators; putative DNA-binding transcriptional regulator 4614414 yaiV 12760691 yaiV Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006166660.1 4613791 R 595495 CDS YP_006166661.1 386702824 12760692 complement(4614502..4617480) 1 NC_017660.1 COG3468 Type V secretory pathway, adhesin AidA; Putative flagellin structural protein, putative exported protein 4617480 12760692 KO11_21745 Escherichia coli KO11FL Putative flagellin structural protein, putative exported protein YP_006166661.1 4614502 R 595495 CDS YP_006166662.1 386702825 12760693 4618002..4618976 1 NC_017660.1 COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 4618976 hemB 12760693 hemB Escherichia coli KO11FL delta-aminolevulinic acid dehydratase YP_006166662.1 4618002 D 595495 CDS YP_006166663.1 386702826 12760694 complement(4619083..4619934) 1 NC_017660.1 COG2175 Probable taurine catabolism dioxygenase; taurine dioxygenase 4619934 tauD 12760694 tauD Escherichia coli KO11FL taurine dioxygenase YP_006166663.1 4619083 R 595495 CDS YP_006166664.1 386702827 12760695 complement(4619931..4620758) 1 NC_017660.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; taurine transporter subunit 4620758 tauC 12760695 tauC Escherichia coli KO11FL taurine transporter subunit YP_006166664.1 4619931 R 595495 CDS YP_006166665.1 386702828 12760696 complement(4620755..4621522) 1 NC_017660.1 COG4525 ABC-type taurine transport system, ATPase component; taurine transporter ATP-binding subunit 4621522 tauB 12760696 tauB Escherichia coli KO11FL taurine transporter ATP-binding subunit YP_006166665.1 4620755 R 595495 CDS YP_006166666.1 386702829 12760697 complement(4621535..4622497) 1 NC_017660.1 COG4521 ABC-type taurine transport system, periplasmic component; taurine transporter substrate binding subunit 4622497 tauA 12760697 tauA Escherichia coli KO11FL taurine transporter substrate binding subunit YP_006166666.1 4621535 R 595495 CDS YP_006166667.1 386702830 12760698 4623113..4623784 1 NC_017660.1 COG2120 Uncharacterized proteins, LmbE homologs; yaiS; hypothetical protein 4623784 12760698 KO11_21775 Escherichia coli KO11FL hypothetical protein YP_006166667.1 4623113 D 595495 CDS YP_006166668.1 386702831 12760699 4623794..4624990 1 NC_017660.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; putative glucosyltransferase 4624990 yaiP 12760699 yaiP Escherichia coli KO11FL putative glucosyltransferase YP_006166668.1 4623794 D 595495 CDS YP_006166669.1 386702832 12760700 4625109..4625549 1 NC_017660.1 COG0110 Acetyltransferase (isoleucine patch superfamily); putative transferase 4625549 12760700 KO11_21785 Escherichia coli KO11FL putative transferase YP_006166669.1 4625109 D 595495 CDS YP_006166670.1 386702833 12760701 4625551..4626324 1 NC_017660.1 yaiO; hypothetical protein 4626324 12760701 KO11_21790 Escherichia coli KO11FL hypothetical protein YP_006166670.1 4625551 D 595495 CDS YP_006166671.1 386702834 12760702 4626509..4626784 1 NC_017660.1 COG1937 Uncharacterized protein conserved in bacteria; regulator protein FrmR 4626784 frmR 12760702 frmR Escherichia coli KO11FL regulator protein FrmR YP_006166671.1 4626509 D 595495 CDS YP_006166672.1 386702835 12760703 4626819..4627928 1 NC_017660.1 COG1062 Zn-dependent alcohol dehydrogenases, class III; S-(hydroxymethyl)glutathione dehydrogenase 4627928 frmA 12760703 frmA Escherichia coli KO11FL S-(hydroxymethyl)glutathione dehydrogenase YP_006166672.1 4626819 D 595495 CDS YP_006166673.1 386702836 12760704 4628021..4628854 1 NC_017660.1 COG0627 Predicted esterase; S-formylglutathione hydrolase 4628854 frmB 12760704 frmB Escherichia coli KO11FL S-formylglutathione hydrolase YP_006166673.1 4628021 D 595495 CDS YP_006166674.1 386702837 12760705 complement(4629080..4629619) 1 NC_017660.1 COG3122 Uncharacterized protein conserved in bacteria; nucleoprotein/polynucleotide-associated enzyme 4629619 yaiL 12760705 yaiL Escherichia coli KO11FL nucleoprotein/polynucleotide-associated enzyme YP_006166674.1 4629080 R 595495 CDS YP_006166675.1 386702838 12760706 complement(4629721..4630932) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative 3-hydroxyphenylpropionic transporter MhpT 4630932 mhpT 12760706 mhpT Escherichia coli KO11FL putative 3-hydroxyphenylpropionic transporter MhpT YP_006166675.1 4629721 R 595495 CDS YP_006166676.1 386702839 12760707 complement(4631108..4632121) 1 NC_017660.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases; 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase 4632121 mhpE 12760707 mhpE Escherichia coli KO11FL 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase YP_006166676.1 4631108 R 595495 CDS YP_006166677.1 386702840 12760708 complement(4632118..4633068) 1 NC_017660.1 COG4569 Acetaldehyde dehydrogenase (acetylating); acetaldehyde dehydrogenase 4633068 mhpF 12760708 mhpF Escherichia coli KO11FL acetaldehyde dehydrogenase YP_006166677.1 4632118 R 595495 CDS YP_006166678.1 386702841 12760709 complement(4633065..4633874) 1 NC_017660.1 COG3971 2-keto-4-pentenoate hydratase; 2-keto-4-pentenoate hydratase 4633874 mhpD 12760709 mhpD Escherichia coli KO11FL 2-keto-4-pentenoate hydratase YP_006166678.1 4633065 R 595495 CDS YP_006166679.1 386702842 12760710 complement(4633884..4634750) 1 NC_017660.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 4634750 mhpC 12760710 mhpC Escherichia coli KO11FL 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase YP_006166679.1 4633884 R 595495 CDS YP_006166680.1 386702843 12760711 complement(4634768..4635712) 1 NC_017660.1 3-(2,3-dihydroxyphenyl)propionate dioxygenase 4635712 mhpB 12760711 mhpB Escherichia coli KO11FL 3-(2,3-dihydroxyphenyl)propionate dioxygenase YP_006166680.1 4634768 R 595495 CDS YP_006166681.1 386702844 12760712 complement(4635714..4637378) 1 NC_017660.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 3-(3-hydroxyphenyl)propionate hydroxylase 4637378 mhpA 12760712 mhpA Escherichia coli KO11FL 3-(3-hydroxyphenyl)propionate hydroxylase YP_006166681.1 4635714 R 595495 CDS YP_006166682.1 386702845 12760713 4637569..4638402 1 NC_017660.1 COG1414 Transcriptional regulator; DNA-binding transcriptional activator MhpR 4638402 mhpR 12760713 mhpR Escherichia coli KO11FL DNA-binding transcriptional activator MhpR YP_006166682.1 4637569 D 595495 CDS YP_006166683.1 386702846 12760714 4638470..4639561 1 NC_017660.1 COG1609 Transcriptional regulators; lac repressor 4639561 lacI 12760714 lacI Escherichia coli KO11FL lac repressor YP_006166683.1 4638470 D 595495 CDS YP_006166684.1 386702847 12760715 4639684..4642758 1 NC_017660.1 COG3250 Beta-galactosidase/beta-glucuronidase; beta-D-galactosidase 4642758 lacZ 12760715 lacZ Escherichia coli KO11FL beta-D-galactosidase YP_006166684.1 4639684 D 595495 CDS YP_006166685.1 386702848 12760716 4642810..4644063 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; galactoside permease 4644063 lacY 12760716 lacY Escherichia coli KO11FL galactoside permease YP_006166685.1 4642810 D 595495 CDS YP_006166686.1 386702849 12760717 4644120..4644740 1 NC_017660.1 COG0110 Acetyltransferase (isoleucine patch superfamily); galactoside O-acetyltransferase 4644740 lacA 12760717 lacA Escherichia coli KO11FL galactoside O-acetyltransferase YP_006166686.1 4644120 D 595495 CDS YP_006166687.1 386702850 12760718 complement(4644843..4645997) 1 NC_017660.1 COG2807 Cyanate permease; putative cyanate transporter 4645997 cynX 12760718 cynX Escherichia coli KO11FL putative cyanate transporter YP_006166687.1 4644843 R 595495 CDS YP_006166688.1 386702851 12760719 complement(4646030..4646500) 1 NC_017660.1 COG1513 Cyanate lyase; cyanate hydratase 4646500 cynS 12760719 cynS Escherichia coli KO11FL cyanate hydratase YP_006166688.1 4646030 R 595495 CDS YP_006166689.1 386702852 12760720 complement(4646531..4647190) 1 NC_017660.1 COG0288 Carbonic anhydrase; carbonate dehydratase 4647190 cynT 12760720 cynT Escherichia coli KO11FL carbonate dehydratase YP_006166689.1 4646531 R 595495 CDS YP_006166690.1 386702853 12760721 4647300..4648199 1 NC_017660.1 COG0583 Transcriptional regulator; DNA-binding transcriptional regulator CynR 4648199 cynR 12760721 cynR Escherichia coli KO11FL DNA-binding transcriptional regulator CynR YP_006166690.1 4647300 D 595495 CDS YP_006166691.1 386702854 12760722 complement(4648239..4649522) 1 NC_017660.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases; cytosine deaminase 4649522 codA 12760722 codA Escherichia coli KO11FL cytosine deaminase YP_006166691.1 4648239 R 595495 CDS YP_006166692.1 386702855 12760723 complement(4649512..4650771) 1 NC_017660.1 COG1457 Purine-cytosine permease and related proteins; cytosine permease 4650771 codB 12760723 codB Escherichia coli KO11FL cytosine permease YP_006166692.1 4649512 R 595495 CDS YP_006166693.1 386702856 12760724 complement(4651008..4652894) 1 NC_017660.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; propionyl-CoA synthetase 4652894 prpE 12760724 prpE Escherichia coli KO11FL propionyl-CoA synthetase YP_006166693.1 4651008 R 595495 CDS YP_006166694.1 386702857 12760725 complement(4652934..4654385) 1 NC_017660.1 COG2079 Uncharacterized protein involved in propionate catabolism; 2-methylcitrate dehydratase 4654385 prpD 12760725 prpD Escherichia coli KO11FL 2-methylcitrate dehydratase YP_006166694.1 4652934 R 595495 CDS YP_006166695.1 386702858 12760726 complement(4654419..4655588) 1 NC_017660.1 COG0372 Citrate synthase; methylcitrate synthase 4655588 prpC 12760726 prpC Escherichia coli KO11FL methylcitrate synthase YP_006166695.1 4654419 R 595495 CDS YP_006166696.1 386702859 12760727 complement(4655633..4656523) 1 NC_017660.1 COG2513 PEP phosphonomutase and related enzymes; 2-methylisocitrate lyase 4656523 prpB 12760727 prpB Escherichia coli KO11FL 2-methylisocitrate lyase YP_006166696.1 4655633 R 595495 CDS YP_006166697.1 386702860 12760728 4656762..4658348 1 NC_017660.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; propionate catabolism operon regulatory protein PrpR 4658348 prpR 12760728 prpR Escherichia coli KO11FL propionate catabolism operon regulatory protein PrpR YP_006166697.1 4656762 D 595495 CDS YP_006166698.1 386702861 12760729 complement(4658449..4658724) 1 NC_017660.1 yahO; hypothetical protein 4658724 12760729 KO11_21930 Escherichia coli KO11FL hypothetical protein YP_006166698.1 4658449 R 595495 CDS YP_006166699.1 386702862 12760730 4658910..4659542 1 NC_017660.1 COG1280 Putative threonine efflux protein; neutral amino-acid efflux system 4659542 yahN 12760730 yahN Escherichia coli KO11FL neutral amino-acid efflux system YP_006166699.1 4658910 D 595495 CDS YP_006166700.1 386702863 12760731 complement(4659559..4659804) 1 NC_017660.1 yahM; hypothetical protein 4659804 12760731 KO11_21940 Escherichia coli KO11FL hypothetical protein YP_006166700.1 4659559 R 595495 CDS YP_006166701.1 386702864 12760732 complement(4660217..4661032) 1 NC_017660.1 yahL; hypothetical protein 4661032 12760732 KO11_21945 Escherichia coli KO11FL hypothetical protein YP_006166701.1 4660217 R 595495 CDS YP_006166702.1 386702865 12760733 complement(4661275..4662324) 1 NC_017660.1 COG1064 Zn-dependent alcohol dehydrogenases; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein 4662324 yahK 12760733 yahK Escherichia coli KO11FL putative oxidoreductase, Zn-dependent and NAD(P)-binding protein YP_006166702.1 4661275 R 595495 CDS YP_006166703.1 386702866 12760734 complement(4662411..4663367) 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; putative permease of transport system 4663367 12760734 KO11_21955 Escherichia coli KO11FL putative permease of transport system YP_006166703.1 4662411 R 595495 CDS YP_006166704.1 386702867 12760735 complement(4663364..4664335) 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; putative permease of transport system probably ribose specific 4664335 12760735 KO11_21960 Escherichia coli KO11FL putative permease of transport system probably ribose specific YP_006166704.1 4663364 R 595495 CDS YP_006166705.1 386702868 12760736 complement(4664328..4665812) 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; Putative ATP-binding component of ABC sugar transport system 4665812 12760736 KO11_21965 Escherichia coli KO11FL Putative ATP-binding component of ABC sugar transport system YP_006166705.1 4664328 R 595495 CDS YP_006166706.1 386702869 12760737 complement(4665861..4666847) 1 NC_017660.1 COG1879 ABC-type sugar transport system, periplasmic component; putative sugar-binding protein 4666847 12760737 KO11_21970 Escherichia coli KO11FL putative sugar-binding protein YP_006166706.1 4665861 R 595495 CDS YP_006166707.1 386702870 12760738 complement(4667098..4667508) 1 NC_017660.1 COG4405 Uncharacterized protein conserved in bacteria; hypothetical protein 4667508 12760738 KO11_21975 Escherichia coli KO11FL hypothetical protein YP_006166707.1 4667098 R 595495 CDS YP_006166708.1 386702871 12760739 complement(4667807..4669189) 1 NC_017660.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases; putative deaminase 4669189 yahJ 12760739 yahJ Escherichia coli KO11FL putative deaminase YP_006166708.1 4667807 R 595495 CDS YP_006166709.1 386702872 12760740 complement(4669199..4670149) 1 NC_017660.1 COG0549 Carbamate kinase; putative carbamate kinase 4670149 yahI 12760740 yahI Escherichia coli KO11FL putative carbamate kinase YP_006166709.1 4669199 R 595495 CDS YP_006166710.1 386702873 12760741 complement(4670292..4671710) 1 NC_017660.1 yahG; hypothetical protein 4671710 12760741 KO11_21990 Escherichia coli KO11FL hypothetical protein YP_006166710.1 4670292 R 595495 CDS YP_006166711.1 386702874 12760742 complement(4671710..4673257) 1 NC_017660.1 COG0074 Succinyl-CoA synthetase, alpha subunit; putative acyl-CoA synthetase 4673257 yahF 12760742 yahF Escherichia coli KO11FL putative acyl-CoA synthetase YP_006166711.1 4671710 R 595495 CDS YP_006166712.1 386702875 12760743 complement(4673247..4674110) 1 NC_017660.1 yahE; hypothetical protein 4674110 12760743 KO11_22000 Escherichia coli KO11FL hypothetical protein YP_006166712.1 4673247 R 595495 CDS YP_006166713.1 386702876 12760744 complement(4674150..4674755) 1 NC_017660.1 COG0666 FOG: Ankyrin repeat; putative transcriptional regulator 4674755 yahD 12760744 yahD Escherichia coli KO11FL putative transcriptional regulator YP_006166713.1 4674150 R 595495 CDS YP_006166714.1 386702877 12760745 4675013..4675510 1 NC_017660.1 yahC; hypothetical protein 4675510 12760745 KO11_22010 Escherichia coli KO11FL hypothetical protein YP_006166714.1 4675013 D 595495 CDS YP_006166715.1 386702878 12760746 4675602..4676534 1 NC_017660.1 COG0583 Transcriptional regulator; LysR family transcriptional regulator 4676534 yahB 12760746 yahB Escherichia coli KO11FL LysR family transcriptional regulator YP_006166715.1 4675602 D 595495 CDS YP_006166716.1 386702879 12760747 complement(4676576..4677664) 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; cyclic di-GMP phosphodiesterase 4677664 yahA 12760747 yahA Escherichia coli KO11FL cyclic di-GMP phosphodiesterase YP_006166716.1 4676576 R 595495 CDS YP_006166717.1 386702880 12760748 complement(4677806..4681855) 1 NC_017660.1 COG5295 Autotransporter adhesin; AidA-I adhesin-like protein 4681855 12760748 KO11_22025 Escherichia coli KO11FL AidA-I adhesin-like protein YP_006166717.1 4677806 R 595495 CDS YP_006166718.1 386702881 12760749 complement(4682362..4684395) 1 NC_017660.1 COG1292 Choline-glycine betaine transporter; choline transport protein BetT 4684395 betT 12760749 betT Escherichia coli KO11FL choline transport protein BetT YP_006166718.1 4682362 R 595495 CDS YP_006166719.1 386702882 12760750 4684524..4685111 1 NC_017660.1 COG1309 Transcriptional regulator; transcriptional regulator BetI 4685111 betI 12760750 betI Escherichia coli KO11FL transcriptional regulator BetI YP_006166719.1 4684524 D 595495 CDS YP_006166720.1 386702883 12760751 4685134..4686597 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; betaine aldehyde dehydrogenase 4686597 betB 12760751 betB Escherichia coli KO11FL betaine aldehyde dehydrogenase YP_006166720.1 4685134 D 595495 CDS YP_006166721.1 386702884 12760752 4686611..4688281 1 NC_017660.1 COG2303 Choline dehydrogenase and related flavoproteins; choline dehydrogenase 4688281 betA 12760752 betA Escherichia coli KO11FL choline dehydrogenase YP_006166721.1 4686611 D 595495 CDS YP_006166722.1 386702885 12760753 4688494..4689162 1 NC_017660.1 putative inner membrane protein 4689162 ykgH 12760753 ykgH Escherichia coli KO11FL putative inner membrane protein YP_006166722.1 4688494 D 595495 CDS YP_006166723.1 386702886 12760754 complement(4689405..4690100) 1 NC_017660.1 COG1556 Uncharacterized conserved protein; putative transport protein 4690100 ykgG 12760754 ykgG Escherichia coli KO11FL putative transport protein YP_006166723.1 4689405 R 595495 CDS YP_006166724.1 386702887 12760755 complement(4690093..4691520) 1 NC_017660.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; ykgF; hypothetical protein 4691520 12760755 KO11_22055 Escherichia coli KO11FL hypothetical protein YP_006166724.1 4690093 R 595495 CDS YP_006166725.1 386702888 12760756 complement(4691531..4692250) 1 NC_017660.1 COG0247 Fe-S oxidoreductase; putative oxidoreductase 4692250 ykgE 12760756 ykgE Escherichia coli KO11FL putative oxidoreductase YP_006166725.1 4691531 R 595495 CDS YP_006166726.1 386702889 12760757 complement(4692767..4693621) 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative DNA-binding transcriptional regulator, ARAC-type 4693621 ykgD 12760757 ykgD Escherichia coli KO11FL putative DNA-binding transcriptional regulator, ARAC-type YP_006166726.1 4692767 R 595495 CDS YP_006166727.1 386702890 12760758 4693847..4695172 1 NC_017660.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; pyridine nucleotide-disulfide oxidoreductase 4695172 ykgC 12760758 ykgC Escherichia coli KO11FL pyridine nucleotide-disulfide oxidoreductase YP_006166727.1 4693847 D 595495 CDS YP_006166728.1 386702891 12760759 4695281..4695517 1 NC_017660.1 ykgI; hypothetical protein 4695517 12760759 KO11_22075 Escherichia coli KO11FL hypothetical protein YP_006166728.1 4695281 D 595495 CDS YP_006166729.1 386702892 12760760 4695529..4696122 1 NC_017660.1 COG3059 Predicted membrane protein; ykgB; hypothetical protein 4696122 12760760 KO11_22080 Escherichia coli KO11FL hypothetical protein YP_006166729.1 4695529 D 595495 CDS YP_006166730.1 386702893 12760761 complement(4696282..4697151) 1 NC_017660.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase; putative reductase 4697151 ykgQ 12760761 ykgQ Escherichia coli KO11FL putative reductase YP_006166730.1 4696282 R 595495 CDS YP_006166731.1 386702894 12760762 4697400..4698257 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; putative AraC-like transcriptional regulator 4698257 ykgA 12760762 ykgA Escherichia coli KO11FL putative AraC-like transcriptional regulator YP_006166731.1 4697400 D 595495 CDS YP_006166732.1 386702895 12760763 complement(4698378..4702631) 1 NC_017660.1 putative invasin 4702631 eaeH 12760763 eaeH Escherichia coli KO11FL putative invasin YP_006166732.1 4698378 R 595495 CDS YP_006166733.1 386702896 12760764 4703503..4703622 1 NC_017660.1 hypothetical protein 4703622 12760764 KO11_22100 Escherichia coli KO11FL hypothetical protein YP_006166733.1 4703503 D 595495 CDS YP_006166734.1 386702897 12760765 4703747..4703848 1 NC_017660.1 ykgR; hypothetical protein 4703848 12760765 KO11_22105 Escherichia coli KO11FL hypothetical protein YP_006166734.1 4703747 D 595495 CDS YP_006166735.1 386702898 12760766 4704211..4704474 1 NC_017660.1 COG0254 Ribosomal protein L31; 50S ribosomal protein L31 4704474 rpmE2 12760766 rpmE2 Escherichia coli KO11FL 50S ribosomal protein L31 YP_006166735.1 4704211 D 595495 CDS YP_006166736.1 386702899 12760767 4704474..4704614 1 NC_017660.1 COG0257 Ribosomal protein L36; 50S ribosomal protein L36 4704614 rpmJ2 12760767 rpmJ2 Escherichia coli KO11FL 50S ribosomal protein L36 YP_006166736.1 4704474 D 595495 CDS YP_006166737.1 386702900 12760768 complement(4704649..4704876) 1 NC_017660.1 ykgL; hypothetical protein 4704876 12760768 KO11_22120 Escherichia coli KO11FL hypothetical protein YP_006166737.1 4704649 R 595495 CDS YP_006166738.1 386702901 12760769 4705699..4706241 1 NC_017660.1 COG2771 DNA-binding HTH domain-containing proteins; putative transcriptional regulator 4706241 matA 12760769 matA Escherichia coli KO11FL putative transcriptional regulator YP_006166738.1 4705699 D 595495 CDS YP_006166739.1 386702902 12760770 4706316..4706903 1 NC_017660.1 matB; hypothetical protein 4706903 12760770 KO11_22130 Escherichia coli KO11FL hypothetical protein YP_006166739.1 4706316 D 595495 CDS YP_006166740.1 386702903 12760771 4706961..4707629 1 NC_017660.1 putative chaperone 4707629 matC 12760771 matC Escherichia coli KO11FL putative chaperone YP_006166740.1 4706961 D 595495 CDS YP_006166741.1 386702904 12760772 4707655..4710180 1 NC_017660.1 yagX; hypothetical protein 4710180 12760772 KO11_22140 Escherichia coli KO11FL hypothetical protein YP_006166741.1 4707655 D 595495 CDS YP_006166742.1 386702905 12760773 4710170..4711813 1 NC_017660.1 yagW; hypothetical protein 4711813 12760773 KO11_22145 Escherichia coli KO11FL hypothetical protein YP_006166742.1 4710170 D 595495 CDS YP_006166743.1 386702906 12760774 4711782..4712492 1 NC_017660.1 yagV; hypothetical protein 4712492 12760774 KO11_22150 Escherichia coli KO11FL hypothetical protein YP_006166743.1 4711782 D 595495 CDS YP_006166744.1 386702907 12760775 4712805..4713134 1 NC_017660.1 COG0727 Predicted Fe-S-cluster oxidoreductase; putative ferredoxin 4713134 ykgJ 12760775 ykgJ Escherichia coli KO11FL putative ferredoxin YP_006166744.1 4712805 D 595495 CDS YP_006166745.1 386702908 12760776 complement(4713382..4713858) 1 NC_017660.1 COG3477 Predicted periplasmic/secreted protein; Inner membrane protein yagU 4713858 yagU 12760776 yagU Escherichia coli KO11FL Inner membrane protein yagU YP_006166745.1 4713382 R 595495 CDS YP_006166746.1 386702909 12760777 complement(4714041..4714289) 1 NC_017660.1 hypothetical protein 4714289 12760777 KO11_22170 Escherichia coli KO11FL hypothetical protein YP_006166746.1 4714041 R 595495 CDS YP_006166747.1 386702910 12760778 4714412..4715101 1 NC_017660.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; aldehyde oxidoreductase 2Fe-2S subunit 4715101 yagT 12760778 yagT Escherichia coli KO11FL aldehyde oxidoreductase 2Fe-2S subunit YP_006166747.1 4714412 D 595495 CDS YP_006166748.1 386702911 12760779 4715098..4716054 1 NC_017660.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; putative oxidoreductase with FAD-binding domain 4716054 yagS 12760779 yagS Escherichia coli KO11FL putative oxidoreductase with FAD-binding domain YP_006166748.1 4715098 D 595495 CDS YP_006166749.1 386702912 12760780 4716051..4718249 1 NC_017660.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; putative oxidoreductase 4718249 yagR 12760780 yagR Escherichia coli KO11FL putative oxidoreductase YP_006166749.1 4716051 D 595495 CDS YP_006166750.1 386702913 12760781 4718259..4719215 1 NC_017660.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; yagQ; hypothetical protein 4719215 12760781 KO11_22190 Escherichia coli KO11FL hypothetical protein YP_006166750.1 4718259 D 595495 CDS YP_006166751.1 386702914 12760782 4719194..4719604 1 NC_017660.1 COG0583 Transcriptional regulator; putative transcriptional regulator 4719604 yagP 12760782 yagP Escherichia coli KO11FL putative transcriptional regulator YP_006166751.1 4719194 D 595495 CDS YP_006166752.1 386702915 12760784 complement(4719921..4721174) 1 NC_017660.1 COG0014 Gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 4721174 proA 12760784 proA Escherichia coli KO11FL gamma-glutamyl phosphate reductase YP_006166752.1 4719921 R 595495 CDS YP_006166753.1 386702916 12760785 complement(4721186..4722289) 1 NC_017660.1 COG0263 Glutamate 5-kinase; gamma-glutamyl kinase 4722289 proB 12760785 proB Escherichia coli KO11FL gamma-glutamyl kinase YP_006166753.1 4721186 R 595495 CDS YP_006166754.1 386702917 12760786 4722577..4723632 1 NC_017660.1 COG3203 Outer membrane protein (porin); outer membrane phosphoporin protein E 4723632 phoE 12760786 phoE Escherichia coli KO11FL outer membrane phosphoporin protein E YP_006166754.1 4722577 D 595495 CDS YP_006166755.1 386702918 12760787 complement(4723671..4724072) 1 NC_017660.1 DNA-binding transcriptional regulator Crl 4724072 crl 12760787 crl Escherichia coli KO11FL DNA-binding transcriptional regulator Crl YP_006166755.1 4723671 R 595495 CDS YP_006166756.1 386702919 12760788 complement(4724130..4725374) 1 NC_017660.1 COG1073 Hydrolases of the alpha/beta superfamily; fermentation/respiration switch protein 4725374 frsA 12760788 frsA Escherichia coli KO11FL fermentation/respiration switch protein YP_006166756.1 4724130 R 595495 CDS YP_006166757.1 386702920 12760789 complement(4725466..4725924) 1 NC_017660.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; xanthine-guanine phosphoribosyltransferase 4725924 gpt 12760789 gpt Escherichia coli KO11FL xanthine-guanine phosphoribosyltransferase YP_006166757.1 4725466 R 595495 CDS YP_006166758.1 386702921 12760790 4726185..4727642 1 NC_017660.1 COG2195 Di- and tripeptidases; aminoacyl-histidine dipeptidase 4727642 pepD 12760790 pepD Escherichia coli KO11FL aminoacyl-histidine dipeptidase YP_006166758.1 4726185 D 595495 CDS YP_006166759.1 386702922 12760791 complement(4727699..4728313) 1 NC_017660.1 COG1186 Protein chain release factor B; peptide chain release factor-like protein 4728313 prfH 12760791 prfH Escherichia coli KO11FL peptide chain release factor-like protein YP_006166759.1 4727699 R 595495 CDS YP_006166760.1 386702923 12760793 complement(4728310..4729449) 1 NC_017660.1 COG1690 Uncharacterized conserved protein; hypothetical protein 4729449 12760793 KO11_22240 Escherichia coli KO11FL hypothetical protein YP_006166760.1 4728310 R 595495 CDS YP_006166761.1 386702924 12760794 complement(4729695..4730147) 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acyltransferase 4730147 yafP 12760794 yafP Escherichia coli KO11FL putative acyltransferase YP_006166761.1 4729695 R 595495 CDS YP_006166762.1 386702925 12760795 complement(4730144..4731199) 1 NC_017660.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA polymerase IV 4731199 dinB 12760795 dinB Escherichia coli KO11FL DNA polymerase IV YP_006166762.1 4730144 R 595495 CDS YP_006166763.1 386702926 12760796 complement(4731270..4732193) 1 NC_017660.1 COG1360 Flagellar motor protein; lafU; hypothetical protein 4732193 12760796 KO11_22255 Escherichia coli KO11FL hypothetical protein YP_006166763.1 4731270 R 595495 CDS YP_006166764.1 386702927 12760797 complement(4732196..4733059) 1 NC_017660.1 COG1291 Flagellar motor component; flagellar motor protein MotA 4733059 motA2 12760797 motA2 Escherichia coli KO11FL flagellar motor protein MotA YP_006166764.1 4732196 R 595495 CDS YP_006166765.1 386702928 12760798 complement(4733072..4733788) 1 NC_017660.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 4733788 12760798 KO11_22265 Escherichia coli KO11FL flagellar biosynthesis sigma factor YP_006166765.1 4733072 R 595495 CDS YP_006166766.1 386702929 12760799 complement(4733808..4734275) 1 NC_017660.1 putative lateral flagellar biogenesis protein 4734275 12760799 KO11_22270 Escherichia coli KO11FL putative lateral flagellar biogenesis protein YP_006166766.1 4733808 R 595495 CDS YP_006166767.1 386702930 12760800 complement(4734283..4735344) 1 NC_017660.1 COG3144 Flagellar hook-length control protein; flagellar hook-length control protein FliK 4735344 12760800 KO11_22275 Escherichia coli KO11FL flagellar hook-length control protein FliK YP_006166767.1 4734283 R 595495 CDS YP_006166768.1 386702931 12760801 complement(4735341..4735652) 1 NC_017660.1 Lateral flagellar chaperone protein (FliT-like) 4735652 12760801 KO11_22280 Escherichia coli KO11FL Lateral flagellar chaperone protein (FliT-like) YP_006166768.1 4735341 R 595495 CDS YP_006166769.1 386702932 12760802 complement(4735657..4736049) 1 NC_017660.1 COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS 4736049 fliS2 12760802 fliS2 Escherichia coli KO11FL flagellar protein FliS YP_006166769.1 4735657 R 595495 CDS YP_006166770.1 386702933 12760803 complement(4736072..4737388) 1 NC_017660.1 COG1345 Flagellar capping protein; putative lateral flagellar filament capping protein 4737388 12760803 KO11_22290 Escherichia coli KO11FL putative lateral flagellar filament capping protein YP_006166770.1 4736072 R 595495 CDS YP_006166771.1 386702934 12760804 complement(4737595..4738509) 1 NC_017660.1 COG1344 Flagellin and related hook-associated proteins; Lateral flagellin (FliC-like) protein 4738509 12760804 KO11_22295 Escherichia coli KO11FL Lateral flagellin (FliC-like) protein YP_006166771.1 4737595 R 595495 CDS YP_006166772.1 386702935 12760805 complement(4738967..4740175) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase IS4 family protein 4740175 12760805 KO11_22300 Escherichia coli KO11FL transposase IS4 family protein YP_006166772.1 4738967 R 595495 CDS YP_006166773.1 386702936 12760806 4740333..4741175 1 NC_017660.1 COG3710 DNA-binding winged-HTH domains; putative lateral flagellar putative transmembrane regulator 4741175 12760806 KO11_22305 Escherichia coli KO11FL putative lateral flagellar putative transmembrane regulator YP_006166773.1 4740333 D 595495 CDS YP_006166774.1 386702937 12760807 complement(4741234..4742211) 1 NC_017660.1 COG0469 Pyruvate kinase; hypothetical protein 4742211 12760807 KO11_22310 Escherichia coli KO11FL hypothetical protein YP_006166774.1 4741234 R 595495 CDS YP_006166775.1 386702938 12760808 complement(4742228..4743157) 1 NC_017660.1 COG1344 Flagellin and related hook-associated proteins; lateral flagellar hook associated protein 3 4743157 12760808 KO11_22315 Escherichia coli KO11FL lateral flagellar hook associated protein 3 YP_006166775.1 4742228 R 595495 CDS YP_006166776.1 386702939 12760809 complement(4743172..4744548) 1 NC_017660.1 COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK 4744548 flgK2 12760809 flgK2 Escherichia coli KO11FL flagellar hook-associated protein FlgK YP_006166776.1 4743172 R 595495 CDS YP_006166777.1 386702940 12760810 complement(4744731..4745030) 1 NC_017660.1 COG3951 Rod binding protein; putative lateral flagellar peptidoglycan hydrolase 4745030 12760810 KO11_22325 Escherichia coli KO11FL putative lateral flagellar peptidoglycan hydrolase YP_006166777.1 4744731 R 595495 CDS YP_006166778.1 386702941 12760811 complement(4745030..4746130) 1 NC_017660.1 COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein 4746130 flgI2 12760811 flgI2 Escherichia coli KO11FL flagellar basal body P-ring protein YP_006166778.1 4745030 R 595495 CDS YP_006166779.1 386702942 12760812 complement(4746145..4746810) 1 NC_017660.1 COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein 4746810 flgH2 12760812 flgH2 Escherichia coli KO11FL flagellar basal body L-ring protein YP_006166779.1 4746145 R 595495 CDS YP_006166780.1 386702943 12760813 complement(4747082..4747867) 1 NC_017660.1 COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG 4747867 flgG2 12760813 flgG2 Escherichia coli KO11FL flagellar basal body rod protein FlgG YP_006166780.1 4747082 R 595495 CDS YP_006166781.1 386702944 12760814 complement(4747946..4748683) 1 NC_017660.1 COG4787 Flagellar basal body rod protein; flagellar basal body rod protein FlgF 4748683 flgF2 12760814 flgF2 Escherichia coli KO11FL flagellar basal body rod protein FlgF YP_006166781.1 4747946 R 595495 CDS YP_006166782.1 386702945 12760815 complement(4748683..4749885) 1 NC_017660.1 COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 4749885 flgE2 12760815 flgE2 Escherichia coli KO11FL flagellar hook protein FlgE YP_006166782.1 4748683 R 595495 CDS YP_006166783.1 386702946 12760816 complement(4749970..4750683) 1 NC_017660.1 COG1843 Flagellar hook capping protein; putative lateral flagellar hook assembly protein 4750683 12760816 KO11_22355 Escherichia coli KO11FL putative lateral flagellar hook assembly protein YP_006166783.1 4749970 R 595495 CDS YP_006166784.1 386702947 12760817 complement(4750683..4751114) 1 NC_017660.1 COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC 4751114 flgC2 12760817 flgC2 Escherichia coli KO11FL flagellar basal body rod protein FlgC YP_006166784.1 4750683 R 595495 CDS YP_006166785.1 386702948 12760818 complement(4751117..4751452) 1 NC_017660.1 COG1815 Flagellar basal body protein; flagellar basal-body rod protein FlgB 4751452 12760818 KO11_22365 Escherichia coli KO11FL flagellar basal-body rod protein FlgB YP_006166785.1 4751117 R 595495 CDS YP_006166786.1 386702949 12760819 4751534..4752271 1 NC_017660.1 COG1261 Flagellar basal body P-ring biosynthesis protein; putative lateral flagellar P-ring addition protein 4752271 12760819 KO11_22370 Escherichia coli KO11FL putative lateral flagellar P-ring addition protein YP_006166786.1 4751534 D 595495 CDS YP_006166787.1 386702950 12760820 4752352..4752630 1 NC_017660.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor); anti-sigma-28 factor FlgM 4752630 12760820 KO11_22375 Escherichia coli KO11FL anti-sigma-28 factor FlgM YP_006166787.1 4752352 D 595495 CDS YP_006166788.1 386702951 12760821 4752643..4753071 1 NC_017660.1 hypothetical protein 4753071 12760821 KO11_22380 Escherichia coli KO11FL hypothetical protein YP_006166788.1 4752643 D 595495 CDS YP_006166789.1 386702952 12760822 4753198..4754127 1 NC_017660.1 putative lateral flagellar associated protein 4754127 12760822 KO11_22385 Escherichia coli KO11FL putative lateral flagellar associated protein YP_006166789.1 4753198 D 595495 CDS YP_006166790.1 386702953 12760823 4754306..4756750 1 NC_017660.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyltransferase 4756750 12760823 KO11_22390 Escherichia coli KO11FL putative glycosyltransferase YP_006166790.1 4754306 D 595495 CDS YP_006166791.1 386702954 12760824 complement(4757172..4757762) 1 NC_017660.1 Repressor protein CI 4757762 12760824 KO11_22395 Escherichia coli KO11FL Repressor protein CI YP_006166791.1 4757172 R 595495 CDS YP_006166792.1 386702955 12760825 4757932..4758159 1 NC_017660.1 COG3423 Predicted transcriptional regulator; putative phage transcriptional regulator 4758159 12760825 KO11_22400 Escherichia coli KO11FL putative phage transcriptional regulator YP_006166792.1 4757932 D 595495 CDS YP_006166793.1 386702956 12760826 4758161..4759009 1 NC_017660.1 COG2801 Transposase and inactivated derivatives; transposase 4759009 12760826 KO11_22405 Escherichia coli KO11FL transposase YP_006166793.1 4758161 D 595495 CDS YP_006166794.1 386702957 12760827 complement(4758970..4759164) 1 NC_017660.1 fragment; frdA_1; hypothetical protein 4759164 12760827 KO11_22410 Escherichia coli KO11FL hypothetical protein YP_006166794.1 4758970 R 595495 CDS YP_006166795.1 386702958 12760828 4759489..4760466 1 NC_017660.1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II); EF-P-lysine aminoacylase 4760466 yjeA 12760828 yjeA Escherichia coli KO11FL EF-P-lysine aminoacylase YP_006166795.1 4759489 D 595495 CDS YP_006166796.1 386702959 12760829 4760685..4762187 1 NC_017660.1 COG0531 Amino acid transporters; inner membrane transporter YjeM 4762187 yjeM 12760829 yjeM Escherichia coli KO11FL inner membrane transporter YjeM YP_006166796.1 4760685 D 595495 CDS YP_006166797.1 386702960 12760830 4762239..4762553 1 NC_017660.1 hypothetical protein 4762553 12760830 KO11_22425 Escherichia coli KO11FL hypothetical protein YP_006166797.1 4762239 D 595495 CDS YP_006166798.1 386702961 12760831 4762550..4762864 1 NC_017660.1 hypothetical protein 4762864 12760831 KO11_22430 Escherichia coli KO11FL hypothetical protein YP_006166798.1 4762550 D 595495 CDS YP_006166799.1 386702962 12760832 complement(4762893..4766216) 1 NC_017660.1 COG3264 Small-conductance mechanosensitive channel; putative mechanosensitive channel protein 4766216 yjeP 12760832 yjeP Escherichia coli KO11FL putative mechanosensitive channel protein YP_006166799.1 4762893 R 595495 CDS YP_006166800.1 386702963 12760833 complement(4766238..4767206) 1 NC_017660.1 COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 4767206 psd 12760833 psd Escherichia coli KO11FL phosphatidylserine decarboxylase YP_006166800.1 4766238 R 595495 CDS YP_006166801.1 386702964 12760834 complement(4767303..4768355) 1 NC_017660.1 COG1162 Predicted GTPases; GTPase RsgA 4768355 rsgA 12760834 rsgA Escherichia coli KO11FL GTPase RsgA YP_006166801.1 4767303 R 595495 CDS YP_006166802.1 386702965 12760835 4768450..4768995 1 NC_017660.1 COG1949 Oligoribonuclease (3->5 exoribonuclease); oligoribonuclease 4768995 orn 12760835 orn Escherichia coli KO11FL oligoribonuclease YP_006166802.1 4768450 D 595495 CDS YP_006166803.1 386702966 12760838 complement(4769663..4770802) 1 NC_017660.1 COG1600 Uncharacterized Fe-S protein; putative Fe-S electron transport protein 4770802 yjeS 12760838 yjeS Escherichia coli KO11FL putative Fe-S electron transport protein YP_006166803.1 4769663 R 595495 CDS YP_006166804.1 386702967 12761487 4770801..4772348 1 NC_017660.1 COG0062 Uncharacterized conserved protein; putative carbohydrate kinase 4772348 yjeF 12761487 yjeF Escherichia coli KO11FL putative carbohydrate kinase YP_006166804.1 4770801 D 595495 CDS YP_006166805.1 386702968 12761488 4772320..4772781 1 NC_017660.1 COG0802 Predicted ATPase or kinase; ADP-binding protein 4772781 yjeE 12761488 yjeE Escherichia coli KO11FL ADP-binding protein YP_006166805.1 4772320 D 595495 CDS YP_006166806.1 386702969 12761489 4772800..4774137 1 NC_017660.1 COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase II 4774137 amiB 12761489 amiB Escherichia coli KO11FL N-acetylmuramoyl-l-alanine amidase II YP_006166806.1 4772800 D 595495 CDS YP_006166807.1 386702970 12761490 4774147..4775994 1 NC_017660.1 COG0323 DNA mismatch repair enzyme (predicted ATPase); DNA mismatch repair protein 4775994 mutL 12761490 mutL Escherichia coli KO11FL DNA mismatch repair protein YP_006166807.1 4774147 D 595495 CDS YP_006166808.1 386702971 12761491 4775987..4776937 1 NC_017660.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 4776937 miaA 12761491 miaA Escherichia coli KO11FL tRNA delta(2)-isopentenylpyrophosphate transferase YP_006166808.1 4775987 D 595495 CDS YP_006166809.1 386702972 12761492 4777023..4777331 1 NC_017660.1 COG1923 Uncharacterized host factor I protein; RNA-binding protein Hfq 4777331 hfq 12761492 hfq Escherichia coli KO11FL RNA-binding protein Hfq YP_006166809.1 4777023 D 595495 CDS YP_006166810.1 386702973 12761494 4777407..4778687 1 NC_017660.1 COG2262 GTPases; GTPase HflX 4778687 hflX 12761494 hflX Escherichia coli KO11FL GTPase HflX YP_006166810.1 4777407 D 595495 CDS YP_006166811.1 386702974 12761496 4778773..4780032 1 NC_017660.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; FtsH protease regulator HflK 4780032 hflK 12761496 hflK Escherichia coli KO11FL FtsH protease regulator HflK YP_006166811.1 4778773 D 595495 CDS YP_006166812.1 386702975 12761497 4780035..4781039 1 NC_017660.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; FtsH protease regulator HflC 4781039 hflC 12761497 hflC Escherichia coli KO11FL FtsH protease regulator HflC YP_006166812.1 4780035 D 595495 CDS YP_006166813.1 386702976 12761498 4781121..4781318 1 NC_017660.1 COG3242 Uncharacterized protein conserved in bacteria; hypothetical protein 4781318 yjeT 12761498 yjeT Escherichia coli KO11FL hypothetical protein YP_006166813.1 4781121 D 595495 CDS YP_006166814.1 386702977 12761499 4781422..4782720 1 NC_017660.1 COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 4782720 purA 12761499 purA Escherichia coli KO11FL adenylosuccinate synthetase YP_006166814.1 4781422 D 595495 CDS YP_006166815.1 386702978 12761500 4782925..4783350 1 NC_017660.1 COG1959 Predicted transcriptional regulator; transcriptional repressor NsrR 4783350 nsrR 12761500 nsrR Escherichia coli KO11FL transcriptional repressor NsrR YP_006166815.1 4782925 D 595495 CDS YP_006166816.1 386702979 12761501 4783389..4785830 1 NC_017660.1 COG0557 Exoribonuclease R; exoribonuclease R 4785830 rnr 12761501 rnr Escherichia coli KO11FL exoribonuclease R YP_006166816.1 4783389 D 595495 CDS YP_006166817.1 386702980 12761502 4786010..4786741 1 NC_017660.1 COG0566 rRNA methylases; 23S rRNA (guanosine-2'-O-)-methyltransferase 4786741 rlmB 12761502 rlmB Escherichia coli KO11FL 23S rRNA (guanosine-2'-O-)-methyltransferase YP_006166817.1 4786010 D 595495 CDS YP_006166818.1 386702981 12761503 4786868..4787269 1 NC_017660.1 COG3789 Uncharacterized protein conserved in bacteria; putative cytoplasmic protein 4787269 yjfI 12761503 yjfI Escherichia coli KO11FL putative cytoplasmic protein YP_006166818.1 4786868 D 595495 CDS YP_006166819.1 386702982 12761504 4787288..4787986 1 NC_017660.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription; putative transcriptional regulator effector protein 4787986 yjfJ 12761504 yjfJ Escherichia coli KO11FL putative transcriptional regulator effector protein YP_006166819.1 4787288 D 595495 CDS YP_006166820.1 386702983 12761505 4788037..4788696 1 NC_017660.1 yjfK; hypothetical protein 4788696 12761505 KO11_22540 Escherichia coli KO11FL hypothetical protein YP_006166820.1 4788037 D 595495 CDS YP_006166821.1 386702984 12761506 4788714..4789112 1 NC_017660.1 COG3766 Predicted membrane protein; putative inner membrane protein 4789112 yjfL 12761506 yjfL Escherichia coli KO11FL putative inner membrane protein YP_006166821.1 4788714 D 595495 CDS YP_006166822.1 386702985 12761507 4789122..4789760 1 NC_017660.1 yjfM; hypothetical protein 4789760 12761507 KO11_22550 Escherichia coli KO11FL hypothetical protein YP_006166822.1 4789122 D 595495 CDS YP_006166823.1 386702986 12761508 4789763..4790926 1 NC_017660.1 COG0754 Glutathionylspermidine synthase; putative synthetase/amidase 4790926 yjfC 12761508 yjfC Escherichia coli KO11FL putative synthetase/amidase YP_006166823.1 4789763 D 595495 CDS YP_006166824.1 386702987 12761509 4791010..4792635 1 NC_017660.1 COG1960 Acyl-CoA dehydrogenases; isovaleryl CoA dehydrogenase 4792635 aidB 12761509 aidB Escherichia coli KO11FL isovaleryl CoA dehydrogenase YP_006166824.1 4791010 D 595495 CDS YP_006166825.1 386702988 12761510 complement(4792752..4793039) 1 NC_017660.1 yjfN; hypothetical protein 4793039 12761510 KO11_22565 Escherichia coli KO11FL hypothetical protein YP_006166825.1 4792752 R 595495 CDS YP_006166826.1 386702989 12761511 complement(4793176..4793505) 1 NC_017660.1 putative biofilm stress and motility protein A 4793505 bsmA 12761511 bsmA Escherichia coli KO11FL putative biofilm stress and motility protein A YP_006166826.1 4793176 R 595495 CDS YP_006166827.1 386702990 12761512 4793687..4794436 1 NC_017660.1 COG1073 Hydrolases of the alpha/beta superfamily; esterase 4794436 yjfP 12761512 yjfP Escherichia coli KO11FL esterase YP_006166827.1 4793687 D 595495 CDS YP_006166828.1 386702991 12761513 complement(4794433..4795188) 1 NC_017660.1 COG1349 Transcriptional regulators of sugar metabolism; transcriptional repressor UlaR 4795188 ulaR 12761513 ulaR Escherichia coli KO11FL transcriptional repressor UlaR YP_006166828.1 4794433 R 595495 CDS YP_006166829.1 386702992 12761514 complement(4795296..4796360) 1 NC_017660.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; putative L-ascorbate 6-phosphate lactonase 4796360 ulaG 12761514 ulaG Escherichia coli KO11FL putative L-ascorbate 6-phosphate lactonase YP_006166829.1 4795296 R 595495 CDS YP_006166830.1 386702993 12761515 4796715..4798112 1 NC_017660.1 COG3037 Uncharacterized protein conserved in bacteria; PTS system ascorbate-specific transporter subunit IIC 4798112 ulaA 12761515 ulaA Escherichia coli KO11FL PTS system ascorbate-specific transporter subunit IIC YP_006166830.1 4796715 D 595495 CDS YP_006166831.1 386702994 12761516 4798128..4798268 1 NC_017660.1 COG3414 Phosphotransferase system, galactitol-specific IIB component; PTS system L-ascorbate-specific transporter subunit IIB 4798268 ulaB1 12761516 ulaB1 Escherichia coli KO11FL PTS system L-ascorbate-specific transporter subunit IIB YP_006166831.1 4798128 D 595495 CDS YP_006166832.1 386702995 12761517 4798269..4798433 1 NC_017660.1 COG3414 Phosphotransferase system, galactitol-specific IIB component; putative PTS system transporter subunit IIB 4798433 ulaB2 12761517 ulaB2 Escherichia coli KO11FL putative PTS system transporter subunit IIB YP_006166832.1 4798269 D 595495 CDS YP_006166833.1 386702996 12761518 4798443..4798907 1 NC_017660.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system L-ascorbate-specific transporter subunit IIA 4798907 ulaC 12761518 ulaC Escherichia coli KO11FL PTS system L-ascorbate-specific transporter subunit IIA YP_006166833.1 4798443 D 595495 CDS YP_006166834.1 386702997 12761519 4798921..4799571 1 NC_017660.1 COG0269 3-hexulose-6-phosphate synthase and related proteins; 3-keto-L-gulonate-6-phosphate decarboxylase 4799571 ulaD 12761519 ulaD Escherichia coli KO11FL 3-keto-L-gulonate-6-phosphate decarboxylase YP_006166834.1 4798921 D 595495 CDS YP_006166835.1 386702998 12761520 4799581..4800435 1 NC_017660.1 COG3623 Putative L-xylulose-5-phosphate 3-epimerase; L-xylulose 5-phosphate 3-epimerase 4800435 ulaE 12761520 ulaE Escherichia coli KO11FL L-xylulose 5-phosphate 3-epimerase YP_006166835.1 4799581 D 595495 CDS YP_006166836.1 386702999 12761521 4800435..4801121 1 NC_017660.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase 4801121 ulaF 12761521 ulaF Escherichia coli KO11FL L-ribulose-5-phosphate 4-epimerase YP_006166836.1 4800435 D 595495 CDS YP_006166837.1 386703000 12761522 4801216..4801767 1 NC_017660.1 COG3477 Predicted periplasmic/secreted protein; hypothetical protein 4801767 12761522 KO11_22625 Escherichia coli KO11FL hypothetical protein YP_006166837.1 4801216 D 595495 CDS YP_006166838.1 386703001 12761523 complement(4801842..4802117) 1 NC_017660.1 hypothetical protein 4802117 12761523 KO11_22630 Escherichia coli KO11FL hypothetical protein YP_006166838.1 4801842 R 595495 CDS YP_006166839.1 386703002 12761524 4802444..4802839 1 NC_017660.1 COG0360 Ribosomal protein S6; 30S ribosomal protein S6 4802839 rpsF 12761524 rpsF Escherichia coli KO11FL 30S ribosomal protein S6 YP_006166839.1 4802444 D 595495 CDS YP_006166840.1 386703003 12761525 4802846..4803160 1 NC_017660.1 COG2965 Primosomal replication protein N; primosomal replication protein N 4803160 priB 12761525 priB Escherichia coli KO11FL primosomal replication protein N YP_006166840.1 4802846 D 595495 CDS YP_006166841.1 386703004 12761526 4803165..4803392 1 NC_017660.1 COG0238 Ribosomal protein S18; 30S ribosomal protein S18 4803392 rpsR 12761526 rpsR Escherichia coli KO11FL 30S ribosomal protein S18 YP_006166841.1 4803165 D 595495 CDS YP_006166842.1 386703005 12761527 4803434..4803883 1 NC_017660.1 COG0359 Ribosomal protein L9; 50S ribosomal protein L9 4803883 rplI 12761527 rplI Escherichia coli KO11FL 50S ribosomal protein L9 YP_006166842.1 4803434 D 595495 CDS YP_006166843.1 386703006 12761528 complement(4803954..4804748) 1 NC_017660.1 yjfZ; hypothetical protein 4804748 12761528 KO11_22655 Escherichia coli KO11FL hypothetical protein YP_006166843.1 4803954 R 595495 CDS YP_006166844.1 386703007 12761529 complement(4805188..4805739) 1 NC_017660.1 COG1943 Transposase and inactivated derivatives; putative IS609 transposase TnpA 4805739 12761529 KO11_22660 Escherichia coli KO11FL putative IS609 transposase TnpA YP_006166844.1 4805188 R 595495 CDS YP_006166845.1 386703008 12761530 4805869..4807017 1 NC_017660.1 COG0675 Transposase and inactivated derivatives; putative IS609 transposase TnpB 4807017 12761530 KO11_22670 Escherichia coli KO11FL putative IS609 transposase TnpB YP_006166845.1 4805869 D 595495 CDS YP_006166846.1 386703009 12761531 complement(4807152..4807790) 1 NC_017660.1 COG3061 Cell envelope opacity-associated protein A; putative cell envelope opacity-associated protein 4807790 ytfB 12761531 ytfB Escherichia coli KO11FL putative cell envelope opacity-associated protein YP_006166846.1 4807152 R 595495 CDS YP_006166847.1 386703010 12761532 4808008..4808628 1 NC_017660.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; peptidyl-prolyl cis-trans isomerase 4808628 fklB 12761532 fklB Escherichia coli KO11FL peptidyl-prolyl cis-trans isomerase YP_006166847.1 4808008 D 595495 CDS YP_006166848.1 386703011 12761533 4808937..4810349 1 NC_017660.1 COG1113 Gamma-aminobutyrate permease and related permeases; D-alanine/D-serine/glycine permease 4810349 cycA 12761533 cycA Escherichia coli KO11FL D-alanine/D-serine/glycine permease YP_006166848.1 4808937 D 595495 CDS YP_006166849.1 386703012 12761534 complement(4810394..4811056) 1 NC_017660.1 COG2846 Regulator of cell morphogenesis and NO signaling; iron-sulfur cluster repair di-iron protein 4811056 ytfE 12761534 ytfE Escherichia coli KO11FL iron-sulfur cluster repair di-iron protein YP_006166849.1 4810394 R 595495 CDS YP_006166850.1 386703013 12761535 complement(4811164..4812129) 1 NC_017660.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative inner membrane protein 4812129 ytfF 12761535 ytfF Escherichia coli KO11FL putative inner membrane protein YP_006166850.1 4811164 R 595495 CDS YP_006166851.1 386703014 12761536 complement(4812238..4813098) 1 NC_017660.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases; NAD(P)H:quinone oxidoreductase 4813098 qorB 12761536 qorB Escherichia coli KO11FL NAD(P)H:quinone oxidoreductase YP_006166851.1 4812238 R 595495 CDS YP_006166852.1 386703015 12761537 4813187..4813567 1 NC_017660.1 COG1733 Predicted transcriptional regulators; ytfH; hypothetical protein 4813567 12761537 KO11_22705 Escherichia coli KO11FL hypothetical protein YP_006166852.1 4813187 D 595495 CDS YP_006166853.1 386703016 12761538 complement(4813696..4815639) 1 NC_017660.1 COG0737 5-nucleotidase/2,3-cyclic phosphodiesterase and related esterases; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 4815639 cpdB 12761538 cpdB Escherichia coli KO11FL bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein YP_006166853.1 4813696 R 595495 CDS YP_006166854.1 386703017 12761539 4815829..4816569 1 NC_017660.1 COG1218 3-Phosphoadenosine 5-phosphosulfate (PAPS) 3-phosphatase; adenosine-3'(2'),5'-bisphosphate nucleotidase 4816569 cysQ 12761539 cysQ Escherichia coli KO11FL adenosine-3'(2'),5'-bisphosphate nucleotidase YP_006166854.1 4815829 D 595495 CDS YP_006166855.1 386703018 12761540 complement(4816559..4817116) 1 NC_017660.1 COG3054 Predicted transcriptional regulator; putative transcriptional regulator 4817116 ytfJ 12761540 ytfJ Escherichia coli KO11FL putative transcriptional regulator YP_006166855.1 4816559 R 595495 CDS YP_006166856.1 386703019 12761541 4817441..4817647 1 NC_017660.1 COG1117 ABC-type phosphate transport system, ATPase component; ytfK; hypothetical protein 4817647 12761541 KO11_22725 Escherichia coli KO11FL hypothetical protein YP_006166856.1 4817441 D 595495 CDS YP_006166857.1 386703020 12761542 complement(4817709..4819052) 1 NC_017660.1 COG1253 Hemolysins and related proteins containing CBS domains; ytfL; hypothetical protein 4819052 12761542 KO11_22730 Escherichia coli KO11FL hypothetical protein YP_006166857.1 4817709 R 595495 CDS YP_006166858.1 386703021 12761543 complement(4819375..4820013) 1 NC_017660.1 COG0225 Peptide methionine sulfoxide reductase; methionine sulfoxide reductase A 4820013 msrA 12761543 msrA Escherichia coli KO11FL methionine sulfoxide reductase A YP_006166858.1 4819375 R 595495 CDS YP_006166859.1 386703022 12761544 4820121..4820249 1 NC_017660.1 COG1131 ABC-type multidrug transport system, ATPase component; hypothetical protein 4820249 12761544 KO11_22740 Escherichia coli KO11FL hypothetical protein YP_006166859.1 4820121 D 595495 CDS YP_006166860.1 386703023 12761545 4820219..4821952 1 NC_017660.1 COG0729 Outer membrane protein; surface antigen 4821952 ytfM 12761545 ytfM Escherichia coli KO11FL surface antigen YP_006166860.1 4820219 D 595495 CDS YP_006166861.1 386703024 12761546 4821949..4825728 1 NC_017660.1 COG2911 Uncharacterized protein conserved in bacteria; ytfN; hypothetical protein 4825728 12761546 KO11_22750 Escherichia coli KO11FL hypothetical protein YP_006166861.1 4821949 D 595495 CDS YP_006166862.1 386703025 12761547 4825731..4826072 1 NC_017660.1 COG2105 Uncharacterized conserved protein; ytfP; hypothetical protein 4826072 12761547 KO11_22755 Escherichia coli KO11FL hypothetical protein YP_006166862.1 4825731 D 595495 CDS YP_006166863.1 386703026 12761548 4826285..4826536 1 NC_017660.1 COG2336 Growth regulator; antitoxin ChpS 4826536 chpS 12761548 chpS Escherichia coli KO11FL antitoxin ChpS YP_006166863.1 4826285 D 595495 CDS YP_006166864.1 386703027 12761549 4826530..4826880 1 NC_017660.1 COG2337 Growth inhibitor; toxin ChpB 4826880 chpB 12761549 chpB Escherichia coli KO11FL toxin ChpB YP_006166864.1 4826530 D 595495 CDS YP_006166865.1 386703028 12761550 complement(4826960..4827490) 1 NC_017660.1 COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 4827490 ppa 12761550 ppa Escherichia coli KO11FL inorganic pyrophosphatase YP_006166865.1 4826960 R 595495 CDS YP_006166866.1 386703029 12761551 4827800..4828756 1 NC_017660.1 COG1879 ABC-type sugar transport system, periplasmic component; putative sugar transporter subunit 4828756 ytfQ 12761551 ytfQ Escherichia coli KO11FL putative sugar transporter subunit YP_006166866.1 4827800 D 595495 CDS YP_006166867.1 386703030 12761552 4828896..4830398 1 NC_017660.1 COG1129 ABC-type sugar transport system, ATPase component; putative sugar transporter subunit 4830398 ytfR 12761552 ytfR Escherichia coli KO11FL putative sugar transporter subunit YP_006166867.1 4828896 D 595495 CDS YP_006166868.1 386703031 12761553 4830412..4831434 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; putative sugar transporter subunit 4831434 ytfT 12761553 ytfT Escherichia coli KO11FL putative sugar transporter subunit YP_006166868.1 4830412 D 595495 CDS YP_006166869.1 386703032 12761554 4831421..4832416 1 NC_017660.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; inner membrane ABC transporter permease YjfF 4832416 yjfF 12761554 yjfF Escherichia coli KO11FL inner membrane ABC transporter permease YjfF YP_006166869.1 4831421 D 595495 CDS YP_006166870.1 386703033 12761555 complement(4832449..4833447) 1 NC_017660.1 COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 4833447 fbp 12761555 fbp Escherichia coli KO11FL fructose-1,6-bisphosphatase YP_006166870.1 4832449 R 595495 CDS YP_006166871.1 386703034 12761556 4833623..4834996 1 NC_017660.1 COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4834996 mpl 12761556 mpl Escherichia coli KO11FL UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_006166871.1 4833623 D 595495 CDS YP_006166872.1 386703035 12761557 complement(4835152..4835703) 1 NC_017660.1 COG3028 Uncharacterized protein conserved in bacteria; yjgA; hypothetical protein 4835703 12761557 KO11_22805 Escherichia coli KO11FL hypothetical protein YP_006166872.1 4835152 R 595495 CDS YP_006166873.1 386703036 12761558 4835797..4837149 1 NC_017660.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs; peptidase PmbA 4837149 pmbA 12761558 pmbA Escherichia coli KO11FL peptidase PmbA YP_006166873.1 4835797 D 595495 CDS YP_006166874.1 386703037 12761559 4837416..4837718 1 NC_017660.1 COG3783 Soluble cytochrome b562; cytochrome b562 4837718 cybC 12761559 cybC Escherichia coli KO11FL cytochrome b562 YP_006166874.1 4837416 D 595495 CDS YP_006166875.1 386703038 12761560 complement(4837763..4838227) 1 NC_017660.1 COG0602 Organic radical activating enzymes; anaerobic ribonucleotide reductase-activating protein 4838227 nrdG 12761560 nrdG Escherichia coli KO11FL anaerobic ribonucleotide reductase-activating protein YP_006166875.1 4837763 R 595495 CDS YP_006166876.1 386703039 12761561 complement(4838385..4840523) 1 NC_017660.1 COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; anaerobic ribonucleoside triphosphate reductase 4840523 nrdD 12761561 nrdD Escherichia coli KO11FL anaerobic ribonucleoside triphosphate reductase YP_006166876.1 4838385 R 595495 CDS YP_006166877.1 386703040 12761562 complement(4840917..4842572) 1 NC_017660.1 COG0366 Glycosidases; trehalose-6-phosphate hydrolase 4842572 treC 12761562 treC Escherichia coli KO11FL trehalose-6-phosphate hydrolase YP_006166877.1 4840917 R 595495 CDS YP_006166878.1 386703041 12761563 complement(4842622..4844040) 1 NC_017660.1 COG1264 Phosphotransferase system IIB components; PTS system trehalose(maltose)-specific transporter subunit IIBC 4844040 treB 12761563 treB Escherichia coli KO11FL PTS system trehalose(maltose)-specific transporter subunit IIBC YP_006166878.1 4842622 R 595495 CDS YP_006166879.1 386703042 12761564 complement(4844162..4845109) 1 NC_017660.1 COG1609 Transcriptional regulators; trehalose repressor 4845109 treR 12761564 treR Escherichia coli KO11FL trehalose repressor YP_006166879.1 4844162 R 595495 CDS YP_006166880.1 386703043 12761565 4845488..4848184 1 NC_017660.1 COG0474 Cation transport ATPase; magnesium-transporting ATPase MgtA 4848184 mgtA 12761565 mgtA Escherichia coli KO11FL magnesium-transporting ATPase MgtA YP_006166880.1 4845488 D 595495 CDS YP_006166881.1 386703044 12761566 complement(4848390..4848776) 1 NC_017660.1 COG0251 Putative translation initiation inhibitor, yjgF family; yjgF; hypothetical protein 4848776 12761566 KO11_22850 Escherichia coli KO11FL hypothetical protein YP_006166881.1 4848390 R 595495 CDS YP_006166882.1 386703045 12761567 complement(4848849..4849310) 1 NC_017660.1 COG1781 Aspartate carbamoyltransferase, regulatory subunit; aspartate carbamoyltransferase regulatory subunit 4849310 pyrI 12761567 pyrI Escherichia coli KO11FL aspartate carbamoyltransferase regulatory subunit YP_006166882.1 4848849 R 595495 CDS YP_006166883.1 386703046 12761568 complement(4849323..4850258) 1 NC_017660.1 COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 4850258 pyrB 12761568 pyrB Escherichia coli KO11FL aspartate carbamoyltransferase catalytic subunit YP_006166883.1 4849323 R 595495 CDS YP_006166884.1 386703047 12761569 complement(4850262..4850396) 1 NC_017660.1 pyrBI operon leader peptide 4850396 pyrL 12761569 pyrL Escherichia coli KO11FL pyrBI operon leader peptide YP_006166884.1 4850262 R 595495 CDS YP_006166885.1 386703048 12761570 complement(4850677..4851072) 1 NC_017660.1 COG0251 Putative translation initiation inhibitor, yjgF family; putative mRNA endoribonuclease 4851072 yjgH 12761570 yjgH Escherichia coli KO11FL putative mRNA endoribonuclease YP_006166885.1 4850677 R 595495 CDS YP_006166886.1 386703049 12761571 complement(4851203..4851916) 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 4851916 yjgI 12761571 yjgI Escherichia coli KO11FL oxidoreductase YP_006166886.1 4851203 R 595495 CDS YP_006166887.1 386703050 12761572 4851987..4852580 1 NC_017660.1 COG1309 Transcriptional regulator; putative transcriptional regulator 4852580 yjgJ 12761572 yjgJ Escherichia coli KO11FL putative transcriptional regulator YP_006166887.1 4851987 D 595495 CDS YP_006166888.1 386703051 12761573 4852580..4852708 1 NC_017660.1 hypothetical protein 4852708 12761573 KO11_22885 Escherichia coli KO11FL hypothetical protein YP_006166888.1 4852580 D 595495 CDS YP_006166889.1 386703052 12761574 4852725..4853177 1 NC_017660.1 COG2731 Beta-galactosidase, beta subunit; tabA; hypothetical protein 4853177 12761574 KO11_22890 Escherichia coli KO11FL hypothetical protein YP_006166889.1 4852725 D 595495 CDS YP_006166890.1 386703053 12761576 complement(4854961..4855965) 1 NC_017660.1 COG0078 Ornithine carbamoyltransferase; ornithine carbamoyltransferase subunit I 4855965 argI 12761576 argI Escherichia coli KO11FL ornithine carbamoyltransferase subunit I YP_006166890.1 4854961 R 595495 CDS YP_006166891.1 386703054 12761577 4856127..4856543 1 NC_017660.1 COG3076 Uncharacterized protein conserved in bacteria; RNase E inhibitor protein 4856543 rraB 12761577 rraB Escherichia coli KO11FL RNase E inhibitor protein YP_006166891.1 4856127 D 595495 CDS YP_006166892.1 386703055 12761578 complement(4856589..4857092) 1 NC_017660.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase 4857092 yjgM 12761578 yjgM Escherichia coli KO11FL putative acetyltransferase YP_006166892.1 4856589 R 595495 CDS YP_006166893.1 386703056 12761579 4857285..4858481 1 NC_017660.1 COG4269 Predicted membrane protein; yjgN; hypothetical protein 4858481 12761579 KO11_22925 Escherichia coli KO11FL hypothetical protein YP_006166893.1 4857285 D 595495 CDS YP_006166894.1 386703057 12761580 complement(4858537..4861392) 1 NC_017660.1 COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase 4861392 valS 12761580 valS Escherichia coli KO11FL valyl-tRNA synthetase YP_006166894.1 4858537 R 595495 CDS YP_006166895.1 386703058 12761581 complement(4861392..4861835) 1 NC_017660.1 COG2927 DNA polymerase III, chi subunit; DNA polymerase III subunit chi 4861835 holC 12761581 holC Escherichia coli KO11FL DNA polymerase III subunit chi YP_006166895.1 4861392 R 595495 CDS YP_006166896.1 386703059 12761582 complement(4861969..4863480) 1 NC_017660.1 COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A 4863480 pepA 12761582 pepA Escherichia coli KO11FL multifunctional aminopeptidase A YP_006166896.1 4861969 R 595495 CDS YP_006166897.1 386703060 12761583 4863747..4864847 1 NC_017660.1 COG0795 Predicted permeases; lipopolysaccharide ABC transporter permease LptF 4864847 lptF 12761583 lptF Escherichia coli KO11FL lipopolysaccharide ABC transporter permease LptF YP_006166897.1 4863747 D 595495 CDS YP_006166898.1 386703061 12761584 4864847..4865929 1 NC_017660.1 COG0795 Predicted permeases; lipopolysaccharide ABC transporter permease 4865929 lptG 12761584 lptG Escherichia coli KO11FL lipopolysaccharide ABC transporter permease YP_006166898.1 4864847 D 595495 CDS YP_006166899.1 386703062 12761585 complement(4866048..4867550) 1 NC_017660.1 COG0433 Predicted ATPase; putative ATPase 4867550 yjgR 12761585 yjgR Escherichia coli KO11FL putative ATPase YP_006166899.1 4866048 R 595495 CDS YP_006166900.1 386703063 12761586 complement(4867628..4868626) 1 NC_017660.1 COG1609 Transcriptional regulators; DNA-binding transcriptional repressor, 5-gluconate-binding protein 4868626 idnR 12761586 idnR Escherichia coli KO11FL DNA-binding transcriptional repressor, 5-gluconate-binding protein YP_006166900.1 4867628 R 595495 CDS YP_006166901.1 386703064 12761587 complement(4868693..4870012) 1 NC_017660.1 COG2610 H+/gluconate symporter and related permeases; Gnt-II system L-idonate transporter 4870012 idnT 12761587 idnT Escherichia coli KO11FL Gnt-II system L-idonate transporter YP_006166901.1 4868693 R 595495 CDS YP_006166902.1 386703065 12761588 complement(4870077..4870841) 1 NC_017660.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); gluconate 5-dehydrogenase 4870841 idnO 12761588 idnO Escherichia coli KO11FL gluconate 5-dehydrogenase YP_006166902.1 4870077 R 595495 CDS YP_006166903.1 386703066 12761589 complement(4870865..4871896) 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; L-idonate 5-dehydrogenase 4871896 idnD 12761589 idnD Escherichia coli KO11FL L-idonate 5-dehydrogenase YP_006166903.1 4870865 R 595495 CDS YP_006166904.1 386703067 12761590 4872113..4872700 1 NC_017660.1 COG3265 Gluconate kinase; fragmented by IS10 insertion; D-gluconate kinase 4872700 idnK 12761590 idnK Escherichia coli KO11FL D-gluconate kinase YP_006166904.1 4872113 D 595495 CDS YP_006166905.1 386703068 12761591 complement(4872669..4873877) 1 NC_017660.1 COG3385 FOG: Transposase and inactivated derivatives; transposase IS4 family protein 4873877 12761591 KO11_22985 Escherichia coli KO11FL transposase IS4 family protein YP_006166905.1 4872669 R 595495 CDS YP_006166906.1 386703069 12761592 complement(4874018..4875037) 1 NC_017660.1 COG1064 Zn-dependent alcohol dehydrogenases; alcohol dehydrogenase 4875037 yjgB 12761592 yjgB Escherichia coli KO11FL alcohol dehydrogenase YP_006166906.1 4874018 R 595495 CDS YP_006166907.1 386703070 12761594 4875518..4876786 1 NC_017660.1 COG0582 Integrase; hypothetical protein 4876786 12761594 KO11_22995 Escherichia coli KO11FL hypothetical protein YP_006166907.1 4875518 D 595495 CDS YP_006166908.1 386703071 12761595 4877002..4877877 1 NC_017660.1 COG3440 Predicted restriction endonuclease; HNH nuclease 4877877 12761595 KO11_23000 Escherichia coli KO11FL HNH nuclease YP_006166908.1 4877002 D 595495 CDS YP_006166909.1 386703072 12761596 complement(4877955..4878920) 1 NC_017660.1 5'-nucleotidase 4878920 12761596 KO11_23005 Escherichia coli KO11FL 5'-nucleotidase YP_006166909.1 4877955 R 595495 CDS YP_006166910.1 386703073 12761597 complement(4879062..4879328) 1 NC_017660.1 hypothetical protein 4879328 12761597 KO11_23010 Escherichia coli KO11FL hypothetical protein YP_006166910.1 4879062 R 595495 CDS YP_006166911.1 386703074 12761598 complement(4879321..4881069) 1 NC_017660.1 hypothetical protein 4881069 12761598 KO11_23015 Escherichia coli KO11FL hypothetical protein YP_006166911.1 4879321 R 595495 CDS YP_006166912.1 386703075 12761599 complement(4881264..4882331) 1 NC_017660.1 COG0732 Restriction endonuclease S subunits; restriction modification system DNA specificity subunit 4882331 12761599 KO11_23020 Escherichia coli KO11FL restriction modification system DNA specificity subunit YP_006166912.1 4881264 R 595495 CDS YP_006166913.1 386703076 12761600 complement(4882439..4884073) 1 NC_017660.1 COG0286 Type I restriction-modification system methyltransferase subunit; N-6 DNA methylase 4884073 12761600 KO11_23025 Escherichia coli KO11FL N-6 DNA methylase YP_006166913.1 4882439 R 595495 CDS YP_006166914.1 386703077 12761601 complement(4884137..4887550) 1 NC_017660.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; putative type I restriction enzyme R protein 4887550 12761601 KO11_23030 Escherichia coli KO11FL putative type I restriction enzyme R protein YP_006166914.1 4884137 R 595495 CDS YP_006166915.1 386703078 12761603 4888127..4888810 1 NC_017660.1 COG2378 Predicted transcriptional regulator; hypothetical protein 4888810 12761603 KO11_23035 Escherichia coli KO11FL hypothetical protein YP_006166915.1 4888127 D 595495 CDS YP_006166916.1 386703079 12761604 4888849..4889862 1 NC_017660.1 COG2262 GTPases; putative small GTP-binding domain protein 4889862 12761604 KO11_23040 Escherichia coli KO11FL putative small GTP-binding domain protein YP_006166916.1 4888849 D 595495 CDS YP_006166917.1 386703080 12761605 4889875..4890639 1 NC_017660.1 hypothetical protein 4890639 12761605 KO11_23045 Escherichia coli KO11FL hypothetical protein YP_006166917.1 4889875 D 595495 CDS YP_006166918.1 386703081 12761606 complement(4890860..4891078) 1 NC_017660.1 COG3311 Predicted transcriptional regulator; phage transcriptional regulator AlpA 4891078 12761606 KO11_23050 Escherichia coli KO11FL phage transcriptional regulator AlpA YP_006166918.1 4890860 R 595495 CDS YP_006166919.1 386703082 12761607 complement(4891196..4891810) 1 NC_017660.1 hypothetical protein 4891810 12761607 KO11_23055 Escherichia coli KO11FL hypothetical protein YP_006166919.1 4891196 R 595495 CDS YP_006166920.1 386703083 12761608 4892403..4893356 1 NC_017660.1 hypothetical protein 4893356 12761608 KO11_23060 Escherichia coli KO11FL hypothetical protein YP_006166920.1 4892403 D 595495 CDS YP_006166921.1 386703084 12761609 4893592..4894410 1 NC_017660.1 hypothetical protein 4894410 12761609 KO11_23065 Escherichia coli KO11FL hypothetical protein YP_006166921.1 4893592 D 595495 CDS YP_006166922.1 386703085 12761610 4894440..4894913 1 NC_017660.1 COG2003 DNA repair proteins; hypothetical protein 4894913 12761610 KO11_23070 Escherichia coli KO11FL hypothetical protein YP_006166922.1 4894440 D 595495 CDS YP_006166923.1 386703086 12761611 4894913..4895248 1 NC_017660.1 antitoxin of the YeeV-YeeU toxin-antitoxin system, CP4-44 prophage 4895248 12761611 KO11_23075 Escherichia coli KO11FL antitoxin of the YeeV-YeeU toxin-antitoxin system, CP4-44 prophage YP_006166923.1 4894913 D 595495 CDS YP_006166924.1 386703087 12761612 4895279..4895620 1 NC_017660.1 CP4-6 prophage, toxin of the YkfI-YafW toxin-antitoxin system 4895620 12761612 KO11_23080 Escherichia coli KO11FL CP4-6 prophage, toxin of the YkfI-YafW toxin-antitoxin system YP_006166924.1 4895279 D 595495 CDS YP_006166925.1 386703088 12761613 4895735..4896568 1 NC_017660.1 hypothetical protein 4896568 12761613 KO11_23085 Escherichia coli KO11FL hypothetical protein YP_006166925.1 4895735 D 595495 CDS YP_006166926.1 386703089 12761614 4896638..4897033 1 NC_017660.1 hypothetical protein 4897033 12761614 KO11_23090 Escherichia coli KO11FL hypothetical protein YP_006166926.1 4896638 D 595495 CDS YP_006166927.1 386703090 12761615 4897026..4897973 1 NC_017660.1 hypothetical protein 4897973 12761615 KO11_23095 Escherichia coli KO11FL hypothetical protein YP_006166927.1 4897026 D 595495 CDS YP_006166928.1 386703091 12761616 4898366..4899631 1 NC_017660.1 COG0582 Integrase; site-specific recombinase, phage integrase family protein 4899631 12761616 KO11_23100 Escherichia coli KO11FL site-specific recombinase, phage integrase family protein YP_006166928.1 4898366 D 595495 CDS YP_006166929.1 386703092 12761617 complement(4899832..4901301) 1 NC_017660.1 COG0515 Serine/threonine protein kinase; protein kinase from phage origin 4901301 12761617 KO11_23105 Escherichia coli KO11FL protein kinase from phage origin YP_006166929.1 4899832 R 595495 CDS YP_006166930.1 386703093 12761618 complement(4901298..4901840) 1 NC_017660.1 hypothetical protein 4901840 12761618 KO11_23110 Escherichia coli KO11FL hypothetical protein YP_006166930.1 4901298 R 595495 CDS YP_006166931.1 386703094 12761619 complement(4901848..4903533) 1 NC_017660.1 COG0433 Predicted ATPase; nucleoside triphosphate hydrolase 4903533 12761619 KO11_23115 Escherichia coli KO11FL nucleoside triphosphate hydrolase YP_006166931.1 4901848 R 595495 CDS YP_006166932.1 386703095 12761620 complement(4903523..4904680) 1 NC_017660.1 hypothetical protein 4904680 12761620 KO11_23120 Escherichia coli KO11FL hypothetical protein YP_006166932.1 4903523 R 595495 CDS YP_006166933.1 386703096 12761621 complement(4904683..4905531) 1 NC_017660.1 hypothetical protein 4905531 12761621 KO11_23125 Escherichia coli KO11FL hypothetical protein YP_006166933.1 4904683 R 595495 CDS YP_006166934.1 386703097 12761622 complement(4905542..4909828) 1 NC_017660.1 hypothetical protein 4909828 12761622 KO11_23130 Escherichia coli KO11FL hypothetical protein YP_006166934.1 4905542 R 595495 CDS YP_006166935.1 386703098 12761623 complement(4909825..4911111) 1 NC_017660.1 hypothetical protein 4911111 12761623 KO11_23135 Escherichia coli KO11FL hypothetical protein YP_006166935.1 4909825 R 595495 CDS YP_006166936.1 386703099 12761624 complement(4911129..4912655) 1 NC_017660.1 COG0732 Restriction endonuclease S subunits; restriction modification system DNA specificity domain 4912655 12761624 KO11_23140 Escherichia coli KO11FL restriction modification system DNA specificity domain YP_006166936.1 4911129 R 595495 CDS YP_006166937.1 386703100 12761625 complement(4912655..4914802) 1 NC_017660.1 COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction-modification system methyltransferase subunit 4914802 12761625 KO11_23145 Escherichia coli KO11FL type I restriction-modification system methyltransferase subunit YP_006166937.1 4912655 R 595495 CDS YP_006166938.1 386703101 12761626 complement(4914853..4915239) 1 NC_017660.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; hypothetical protein 4915239 12761626 KO11_23150 Escherichia coli KO11FL hypothetical protein YP_006166938.1 4914853 R 595495 CDS YP_006166939.1 386703102 12761627 complement(4915236..4916579) 1 NC_017660.1 COG4268 McrBC 5-methylcytosine restriction system component; 5-methylcytosine restriction system component 4916579 12761627 KO11_23155 Escherichia coli KO11FL 5-methylcytosine restriction system component YP_006166939.1 4915236 R 595495 CDS YP_006166940.1 386703103 12761628 complement(4916572..4918647) 1 NC_017660.1 COG1401 GTPase subunit of restriction endonuclease; 5-methylcytosine-specific restriction enzyme with GTPase activity 4918647 12761628 KO11_23160 Escherichia coli KO11FL 5-methylcytosine-specific restriction enzyme with GTPase activity YP_006166940.1 4916572 R 595495 CDS YP_006166941.1 386703104 12761629 complement(4918817..4919722) 1 NC_017660.1 COG3440 Predicted restriction endonuclease; putative restriction endonuclease 4919722 12761629 KO11_23165 Escherichia coli KO11FL putative restriction endonuclease YP_006166941.1 4918817 R 595495 CDS YP_006166942.1 386703105 12761630 complement(4919901..4920881) 1 NC_017660.1 nanS; hypothetical protein 4920881 12761630 KO11_23170 Escherichia coli KO11FL hypothetical protein YP_006166942.1 4919901 R 595495 CDS YP_006166943.1 386703106 12761631 complement(4920946..4922052) 1 NC_017660.1 COG3055 Uncharacterized protein conserved in bacteria; N-acetylneuraminic acid mutarotase 4922052 nanM 12761631 nanM Escherichia coli KO11FL N-acetylneuraminic acid mutarotase YP_006166943.1 4920946 R 595495 CDS YP_006166944.1 386703107 12761632 complement(4922072..4922788) 1 NC_017660.1 nanC; hypothetical protein 4922788 12761632 KO11_23180 Escherichia coli KO11FL hypothetical protein YP_006166944.1 4922072 R 595495 CDS YP_006166945.1 386703108 12761633 4924244..4924846 1 NC_017660.1 COG0582 Integrase; tyrosine recombinase 4924846 fimB 12761633 fimB Escherichia coli KO11FL tyrosine recombinase YP_006166945.1 4924244 D 595495 CDS YP_006166946.1 386703109 12761634 4925324..4925920 1 NC_017660.1 COG0582 Integrase; tyrosine recombinase 4925920 fimE 12761634 fimE Escherichia coli KO11FL tyrosine recombinase YP_006166946.1 4925324 D 595495 CDS YP_006166947.1 386703110 12761635 4926400..4926948 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; major type 1 subunit fimbrin (pilin) FimA 4926948 fimA 12761635 fimA Escherichia coli KO11FL major type 1 subunit fimbrin (pilin) FimA YP_006166947.1 4926400 D 595495 CDS YP_006166948.1 386703111 12761636 4927055..4927552 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; type 1 pilus biosynthesis fimbrial protein 4927552 fimI 12761636 fimI Escherichia coli KO11FL type 1 pilus biosynthesis fimbrial protein YP_006166948.1 4927055 D 595495 CDS YP_006166949.1 386703112 12761637 4927589..4928314 1 NC_017660.1 COG3121 P pilus assembly protein, chaperone PapD; type-1 fimbrial chaperone FimC 4928314 fimC 12761637 fimC Escherichia coli KO11FL type-1 fimbrial chaperone FimC YP_006166949.1 4927589 D 595495 CDS YP_006166950.1 386703113 12761638 4928381..4931017 1 NC_017660.1 COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein, type 1 fimbrial synthesis 4931017 fimD 12761638 fimD Escherichia coli KO11FL outer membrane usher protein, type 1 fimbrial synthesis YP_006166950.1 4928381 D 595495 CDS YP_006166951.1 386703114 12761639 4931027..4931557 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; minor component of type 1 fimbriae 4931557 fimF 12761639 fimF Escherichia coli KO11FL minor component of type 1 fimbriae YP_006166951.1 4931027 D 595495 CDS YP_006166952.1 386703115 12761640 4931570..4932073 1 NC_017660.1 COG3539 P pilus assembly protein, pilin FimA; minor component of type 1 fimbriae 4932073 fimG 12761640 fimG Escherichia coli KO11FL minor component of type 1 fimbriae YP_006166952.1 4931570 D 595495 CDS YP_006166953.1 386703116 12761641 4932093..4932995 1 NC_017660.1 adhesin 4932995 fimH 12761641 fimH Escherichia coli KO11FL adhesin YP_006166953.1 4932093 D 595495 CDS YP_006166954.1 386703117 12761642 complement(4933238..4934581) 1 NC_017660.1 COG2610 H+/gluconate symporter and related permeases; fructuronate transporter 4934581 gntP 12761642 gntP Escherichia coli KO11FL fructuronate transporter YP_006166954.1 4933238 R 595495 CDS YP_006166955.1 386703118 12761643 4934921..4936105 1 NC_017660.1 COG1312 D-mannonate dehydratase; mannonate dehydratase 4936105 uxuA 12761643 uxuA Escherichia coli KO11FL mannonate dehydratase YP_006166955.1 4934921 D 595495 CDS YP_006166956.1 386703119 12761644 4936186..4937646 1 NC_017660.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases; D-mannonate oxidoreductase 4937646 uxuB 12761644 uxuB Escherichia coli KO11FL D-mannonate oxidoreductase YP_006166956.1 4936186 D 595495 CDS YP_006166957.1 386703120 12761645 complement(4937668..4937862) 1 NC_017660.1 uxuR; hypothetical protein 4937862 12761645 KO11_23245 Escherichia coli KO11FL hypothetical protein YP_006166957.1 4937668 R 595495 CDS YP_006166958.1 386703121 12761646 4937861..4938634 1 NC_017660.1 COG2186 Transcriptional regulators; DNA-binding transcriptional repressor UxuR 4938634 12761646 KO11_23250 Escherichia coli KO11FL DNA-binding transcriptional repressor UxuR YP_006166958.1 4937861 D 595495 CDS YP_006166959.1 386703122 12761647 complement(4938775..4939605) 1 NC_017660.1 yjiC; hypothetical protein 4939605 12761647 KO11_23255 Escherichia coli KO11FL hypothetical protein YP_006166959.1 4938775 R 595495 CDS YP_006166960.1 386703123 12761648 4940278..4940670 1 NC_017660.1 DNA replication/recombination/repair protein 4940670 iraD 12761648 iraD Escherichia coli KO11FL DNA replication/recombination/repair protein YP_006166960.1 4940278 D 595495 CDS YP_006166961.1 386703124 12761649 complement(4940663..4941574) 1 NC_017660.1 COG0583 Transcriptional regulator; cell density-dependent motility repressor 4941574 qseD 12761649 qseD Escherichia coli KO11FL cell density-dependent motility repressor YP_006166961.1 4940663 R 595495 CDS YP_006166962.1 386703125 12761650 complement(4941639..4942811) 1 NC_017660.1 COG0044 Dihydroorotase and related cyclic amidohydrolases; isoaspartyl dipeptidase 4942811 iadA 12761650 iadA Escherichia coli KO11FL isoaspartyl dipeptidase YP_006166962.1 4941639 R 595495 CDS YP_006166963.1 386703126 12761651 complement(4942824..4943285) 1 NC_017660.1 COG0700 Uncharacterized membrane protein; yjiG; hypothetical protein 4943285 12761651 KO11_23275 Escherichia coli KO11FL hypothetical protein YP_006166963.1 4942824 R 595495 CDS YP_006166964.1 386703127 12761652 complement(4943282..4943965) 1 NC_017660.1 COG3314 Uncharacterized protein conserved in bacteria; yjiH; hypothetical protein 4943965 12761652 KO11_23280 Escherichia coli KO11FL hypothetical protein YP_006166964.1 4943282 R 595495 CDS YP_006166965.1 386703128 12761653 4944215..4944769 1 NC_017660.1 COG1859 RNA:NAD 2-phosphotransferase; RNA 2'-phosphotransferase 4944769 kptA 12761653 kptA Escherichia coli KO11FL RNA 2'-phosphotransferase YP_006166965.1 4944215 D 595495 CDS YP_006166966.1 386703129 12761654 complement(4944782..4945960) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; yjiJ; hypothetical protein 4945960 12761654 KO11_23290 Escherichia coli KO11FL hypothetical protein YP_006166966.1 4944782 R 595495 CDS YP_006166967.1 386703130 12761655 complement(4946028..4946888) 1 NC_017660.1 COG3204 Uncharacterized protein conserved in bacteria; yjiK; hypothetical protein 4946888 12761655 KO11_23295 Escherichia coli KO11FL hypothetical protein YP_006166967.1 4946028 R 595495 CDS YP_006166968.1 386703131 12761656 complement(4946953..4947210) 1 NC_017660.1 hypothetical protein 4947210 12761656 KO11_23300 Escherichia coli KO11FL hypothetical protein YP_006166968.1 4946953 R 595495 CDS YP_006166969.1 386703132 12761657 complement(4947207..4947974) 1 NC_017660.1 COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); yjiL; hypothetical protein 4947974 12761657 KO11_23305 Escherichia coli KO11FL hypothetical protein YP_006166969.1 4947207 R 595495 CDS YP_006166970.1 386703133 12761658 complement(4947984..4949135) 1 NC_017660.1 COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB; putative 2-hydroxyglutaryl-CoA dehydratase 4949135 yjiM 12761658 yjiM Escherichia coli KO11FL putative 2-hydroxyglutaryl-CoA dehydratase YP_006166970.1 4947984 R 595495 CDS YP_006166971.1 386703134 12761659 complement(4949251..4950531) 1 NC_017660.1 COG2733 Predicted membrane protein; yjiN; hypothetical protein 4950531 12761659 KO11_23315 Escherichia coli KO11FL hypothetical protein YP_006166971.1 4949251 R 595495 CDS YP_006166972.1 386703135 12761660 complement(4950572..4951804) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; multidrug efflux system protein MdtM 4951804 mdtM 12761660 mdtM Escherichia coli KO11FL multidrug efflux system protein MdtM YP_006166972.1 4950572 R 595495 CDS YP_006166973.1 386703136 12761661 4952271..4953215 1 NC_017660.1 yjiP; hypothetical protein 4953215 12761661 KO11_23325 Escherichia coli KO11FL hypothetical protein YP_006166973.1 4952271 D 595495 CDS YP_006166974.1 386703137 12761662 complement(4953457..4954869) 1 NC_017660.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; putative transcriptional regulator 4954869 yjiR 12761662 yjiR Escherichia coli KO11FL putative transcriptional regulator YP_006166974.1 4953457 R 595495 CDS YP_006166975.1 386703138 12761663 4955001..4955165 1 NC_017660.1 yjiS; hypothetical protein 4955165 12761663 KO11_23335 Escherichia coli KO11FL hypothetical protein YP_006166975.1 4955001 D 595495 CDS YP_006166976.1 386703139 12761664 4955517..4958057 1 NC_017660.1 COG2366 Protein related to penicillin acylase; penicillin G acylase 4958057 pac 12761664 pac Escherichia coli KO11FL penicillin G acylase YP_006166976.1 4955517 D 595495 CDS YP_006166977.1 386703140 12761665 complement(4958135..4959091) 1 NC_017660.1 COG0523 Putative GTPases (G3E family); putative GTP-binding protein YjiA 4959091 yjiA 12761665 yjiA Escherichia coli KO11FL putative GTP-binding protein YjiA YP_006166977.1 4958135 R 595495 CDS YP_006166978.1 386703141 12761666 complement(4959102..4959305) 1 NC_017660.1 COG2879 Uncharacterized small protein; yjiX; hypothetical protein 4959305 12761666 KO11_23350 Escherichia coli KO11FL hypothetical protein YP_006166978.1 4959102 R 595495 CDS YP_006166979.1 386703142 12761667 complement(4959355..4961505) 1 NC_017660.1 COG1966 Carbon starvation protein, predicted membrane protein; Carbon starvation family protein 4961505 yjiY 12761667 yjiY Escherichia coli KO11FL Carbon starvation family protein YP_006166979.1 4959355 R 595495 CDS YP_006166980.1 386703143 12761668 complement(4961898..4962410) 1 NC_017660.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; 4-hydroxyphenylacetate 3-monooxygenase reductase subunit 4962410 hpaC 12761668 hpaC Escherichia coli KO11FL 4-hydroxyphenylacetate 3-monooxygenase reductase subunit YP_006166980.1 4961898 R 595495 CDS YP_006166981.1 386703144 12761669 complement(4962428..4963990) 1 NC_017660.1 COG2368 Aromatic ring hydroxylase; 4-hydroxyphenylacetic hydroxylase 4963990 hpaB 12761669 hpaB Escherichia coli KO11FL 4-hydroxyphenylacetic hydroxylase YP_006166981.1 4962428 R 595495 CDS YP_006166982.1 386703145 12761670 complement(4964241..4965131) 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; regulator of the 4HPA-hydroxylase operon 4965131 hpaA 12761670 hpaA Escherichia coli KO11FL regulator of the 4HPA-hydroxylase operon YP_006166982.1 4964241 R 595495 CDS YP_006166983.1 386703146 12761671 complement(4965141..4966517) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative 4-hydroxyphenylacetate permease 4966517 hpaX 12761671 hpaX Escherichia coli KO11FL putative 4-hydroxyphenylacetate permease YP_006166983.1 4965141 R 595495 CDS YP_006166984.1 386703147 12761672 complement(4966692..4967480) 1 NC_017660.1 COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 4967480 hpaI 12761672 hpaI Escherichia coli KO11FL 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_006166984.1 4966692 R 595495 CDS YP_006166985.1 386703148 12761673 complement(4967491..4968294) 1 NC_017660.1 COG3971 2-keto-4-pentenoate hydratase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 4968294 hpaH 12761673 hpaH Escherichia coli KO11FL 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_006166985.1 4967491 R 595495 CDS YP_006166986.1 386703149 12761674 complement(4968405..4968785) 1 NC_017660.1 COG3232 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4968785 hpaF 12761674 hpaF Escherichia coli KO11FL 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_006166986.1 4968405 R 595495 CDS YP_006166987.1 386703150 12761675 complement(4968795..4969646) 1 NC_017660.1 COG3384 Uncharacterized conserved protein; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 4969646 hpaD 12761675 hpaD Escherichia coli KO11FL 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_006166987.1 4968795 R 595495 CDS YP_006166988.1 386703151 12761676 complement(4969648..4971114) 1 NC_017660.1 COG1012 NAD-dependent aldehyde dehydrogenases; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4971114 hpaE 12761676 hpaE Escherichia coli KO11FL 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_006166988.1 4969648 R 595495 CDS YP_006166989.1 386703152 12761677 complement(4971111..4972400) 1 NC_017660.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase 4972400 hpaG 12761677 hpaG Escherichia coli KO11FL 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase YP_006166989.1 4971111 R 595495 CDS YP_006166990.1 386703153 12761678 4972672..4973118 1 NC_017660.1 COG1846 Transcriptional regulators; homoprotocatechuate degradative operon repressor 4973118 hpaR 12761678 hpaR Escherichia coli KO11FL homoprotocatechuate degradative operon repressor YP_006166990.1 4972672 D 595495 CDS YP_006166991.1 386703154 12761679 4973237..4974901 1 NC_017660.1 COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein I 4974901 tsr 12761679 tsr Escherichia coli KO11FL methyl-accepting chemotaxis protein I YP_006166991.1 4973237 D 595495 CDS YP_006166992.1 386703155 12761680 complement(4974950..4976311) 1 NC_017660.1 COG0477 Permeases of the major facilitator superfamily; putative transporter 4976311 yjjL 12761680 yjjL Escherichia coli KO11FL putative transporter YP_006166992.1 4974950 R 595495 CDS YP_006166993.1 386703156 12761681 complement(4976526..4977440) 1 NC_017660.1 COG1802 Transcriptional regulators; GntR family transcriptional regulator protein 4977440 yjjM 12761681 yjjM Escherichia coli KO11FL GntR family transcriptional regulator protein YP_006166993.1 4976526 R 595495 CDS YP_006166994.1 386703157 12761682 4977579..4978601 1 NC_017660.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative oxidoreductase, Zn-dependent and NAD(P)-binding protein 4978601 yjjN 12761682 yjjN Escherichia coli KO11FL putative oxidoreductase, Zn-dependent and NAD(P)-binding protein YP_006166994.1 4977579 D 595495 CDS YP_006166995.1 386703158 12761683 complement(4978740..4981031) 1 NC_017660.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; phosphoglycerol transferase I 4981031 opgB 12761683 opgB Escherichia coli KO11FL phosphoglycerol transferase I YP_006166995.1 4978740 R 595495 CDS YP_006166996.1 386703159 12761684 complement(4981285..4981776) 1 NC_017660.1 yjjA; hypothetical protein 4981776 12761684 KO11_23440 Escherichia coli KO11FL hypothetical protein YP_006166996.1 4981285 R 595495 CDS YP_006166997.1 386703160 12761685 complement(4981828..4982565) 1 NC_017660.1 COG1484 DNA replication protein; DNA replication protein DnaC 4982565 dnaC 12761685 dnaC Escherichia coli KO11FL DNA replication protein DnaC YP_006166997.1 4981828 R 595495 CDS YP_006166998.1 386703161 12761686 complement(4982568..4983107) 1 NC_017660.1 primosomal protein I 4983107 dnaT 12761686 dnaT Escherichia coli KO11FL primosomal protein I YP_006166998.1 4982568 R 595495 CDS YP_006166999.1 386703162 12761687 complement(4983214..4983687) 1 NC_017660.1 COG3610 Uncharacterized conserved protein; yjjB; hypothetical protein 4983687 12761687 KO11_23455 Escherichia coli KO11FL hypothetical protein YP_006166999.1 4983214 R 595495 CDS YP_006167000.1 386703163 12761688 complement(4983678..4984448) 1 NC_017660.1 COG2966 Uncharacterized conserved protein; putative structural protein 4984448 yjjP 12761688 yjjP Escherichia coli KO11FL putative structural protein YP_006167000.1 4983678 R 595495 CDS YP_006167001.1 386703164 12761689 4985067..4985792 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative DNA-binding transcriptional regulator 4985792 yjjQ 12761689 yjjQ Escherichia coli KO11FL putative DNA-binding transcriptional regulator YP_006167001.1 4985067 D 595495 CDS YP_006167002.1 386703165 12761690 4985900..4986427 1 NC_017660.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; DNA-binding transcriptional activator BglJ 4986427 bglJ 12761690 bglJ Escherichia coli KO11FL DNA-binding transcriptional activator BglJ YP_006167002.1 4985900 D 595495 CDS YP_006167003.1 386703166 12761691 complement(4986465..4987253) 1 NC_017660.1 COG4114 Uncharacterized Fe-S protein; ferric hydroximate transport ferric iron reductase 4987253 fhuF 12761691 fhuF Escherichia coli KO11FL ferric hydroximate transport ferric iron reductase YP_006167003.1 4986465 R 595495 CDS YP_006167004.1 386703167 12761692 4987394..4987630 1 NC_017660.1 yjjZ; hypothetical protein 4987630 12761692 KO11_23480 Escherichia coli KO11FL hypothetical protein YP_006167004.1 4987394 D 595495 CDS YP_006167005.1 386703168 12761696 complement(4988259..4989290) 1 NC_017660.1 COG2813 16S RNA G1207 methylase RsmC; 16S ribosomal RNA m2G1207 methyltransferase 4989290 rsmC 12761696 rsmC Escherichia coli KO11FL 16S ribosomal RNA m2G1207 methyltransferase YP_006167005.1 4988259 R 595495 CDS YP_006167006.1 386703169 12761697 4989393..4989806 1 NC_017660.1 COG3050 DNA polymerase III, psi subunit; DNA polymerase III subunit psi 4989806 holD 12761697 holD Escherichia coli KO11FL DNA polymerase III subunit psi YP_006167006.1 4989393 D 595495 CDS YP_006167007.1 386703170 12761698 4989775..4990221 1 NC_017660.1 COG0456 Acetyltransferases; ribosomal-protein-alanine N-acetyltransferase 4990221 rimI 12761698 rimI Escherichia coli KO11FL ribosomal-protein-alanine N-acetyltransferase YP_006167007.1 4989775 D 595495 CDS YP_006167008.1 386703171 12761699 4990236..4990913 1 NC_017660.1 COG1011 Predicted hydrolase (HAD superfamily); dUMP phosphatase 4990913 yjjG 12761699 yjjG Escherichia coli KO11FL dUMP phosphatase YP_006167008.1 4990236 D 595495 CDS YP_006167009.1 386703172 12761700 4991004..4992593 1 NC_017660.1 COG4108 Peptide chain release factor RF-3; peptide chain release factor 3 4992593 prfC 12761700 prfC Escherichia coli KO11FL peptide chain release factor 3 YP_006167009.1 4991004 D 595495 CDS YP_006167010.1 386703173 12761701 4992986..4993591 1 NC_017660.1 COG2823 Predicted periplasmic or secreted lipoprotein; hypothetical protein 4993591 osmY 12761701 osmY Escherichia coli KO11FL hypothetical protein YP_006167010.1 4992986 D 595495 CDS YP_006167011.1 386703174 12761703 4993718..4993879 1 NC_017660.1 ytjA; hypothetical protein 4993879 12761703 KO11_23515 Escherichia coli KO11FL hypothetical protein YP_006167011.1 4993718 D 595495 CDS YP_006167012.1 386703175 12761705 4994001..4995074 1 NC_017660.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily; putative esterase 4995074 yjjU 12761705 yjjU Escherichia coli KO11FL putative esterase YP_006167012.1 4994001 D 595495 CDS YP_006167013.1 386703176 12761706 4995071..4995853 1 NC_017660.1 COG0084 Mg-dependent DNase; putative deoxyribonuclease YjjV 4995853 yjjV 12761706 yjjV Escherichia coli KO11FL putative deoxyribonuclease YjjV YP_006167013.1 4995071 D 595495 CDS YP_006167014.1 386703177 12761707 complement(4995966..4996829) 1 NC_017660.1 COG1180 Pyruvate-formate lyase-activating enzyme; putative pyruvate formate lyase activating enzyme 4996829 yjjW 12761707 yjjW Escherichia coli KO11FL putative pyruvate formate lyase activating enzyme YP_006167014.1 4995966 R 595495 CDS YP_006167015.1 386703178 12761708 complement(4996801..4998351) 1 NC_017660.1 yjjI; hypothetical protein 4998351 12761708 KO11_23535 Escherichia coli KO11FL hypothetical protein YP_006167015.1 4996801 R 595495 CDS YP_006167016.1 386703179 12761709 4998403..4998504 1 NC_017660.1 hypothetical protein 4998504 12761709 KO11_23540 Escherichia coli KO11FL hypothetical protein YP_006167016.1 4998403 D 595495 CDS YP_006167017.1 386703180 12761710 4998609..4999388 1 NC_017660.1 COG0274 Deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase 4999388 deoC 12761710 deoC Escherichia coli KO11FL deoxyribose-phosphate aldolase YP_006167017.1 4998609 D 595495 CDS YP_006167018.1 386703181 12761711 4999515..5000837 1 NC_017660.1 COG0213 Thymidine phosphorylase; thymidine phosphorylase 5000837 deoA 12761711 deoA Escherichia coli KO11FL thymidine phosphorylase YP_006167018.1 4999515 D 595495 CDS YP_006167019.1 386703182 12761712 5000889..5002112 1 NC_017660.1 COG1015 Phosphopentomutase; phosphopentomutase 5002112 deoB 12761712 deoB Escherichia coli KO11FL phosphopentomutase YP_006167019.1 5000889 D 595495 CDS YP_006167020.1 386703183 12761713 5002192..5002911 1 NC_017660.1 COG0813 Purine-nucleoside phosphorylase; purine nucleoside phosphorylase 5002911 deoD 12761713 deoD Escherichia coli KO11FL purine nucleoside phosphorylase YP_006167020.1 5002192 D 595495 CDS YP_006167021.1 386703184 12761714 complement(5003186..5003335) 1 NC_017660.1 hypothetical protein 5003335 12761714 KO11_23565 Escherichia coli KO11FL hypothetical protein YP_006167021.1 5003186 R 595495 CDS YP_006167022.1 386703185 12761715 complement(5003367..5004383) 1 NC_017660.1 COG0095 Lipoate-protein ligase A; lipoate-protein ligase A 5004383 lplA 12761715 lplA Escherichia coli KO11FL lipoate-protein ligase A YP_006167022.1 5003367 R 595495 CDS YP_006167023.1 386703186 12761716 complement(5004411..5005055) 1 NC_017660.1 COG3726 Uncharacterized membrane protein affecting hemolysin expression; ytjD; hypothetical protein 5005055 12761716 KO11_23575 Escherichia coli KO11FL hypothetical protein YP_006167023.1 5004411 R 595495 CDS YP_006167024.1 386703187 12761717 5005161..5006129 1 NC_017660.1 COG0560 Phosphoserine phosphatase; phosphoserine phosphatase 5006129 serB 12761717 serB Escherichia coli KO11FL phosphoserine phosphatase YP_006167024.1 5005161 D 595495 CDS YP_006167025.1 386703188 12761718 5006178..5007560 1 NC_017660.1 COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 5007560 radA 12761718 radA Escherichia coli KO11FL DNA repair protein RadA YP_006167025.1 5006178 D 595495 CDS YP_006167026.1 386703189 12761719 5007581..5008813 1 NC_017660.1 COG1396 Predicted transcriptional regulators; bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase 5008813 nadR 12761719 nadR Escherichia coli KO11FL bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase YP_006167026.1 5007581 D 595495 CDS YP_006167027.1 386703190 12761720 complement(5009120..5010787) 1 NC_017660.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains; putative ABC transporter ATP-binding protein 5010787 yjjK 12761720 yjjK Escherichia coli KO11FL putative ABC transporter ATP-binding protein YP_006167027.1 5009120 R 595495 CDS YP_006167028.1 386703191 12761721 5010998..5012935 1 NC_017660.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic murein transglycosylase 5012935 slt 12761721 slt Escherichia coli KO11FL lytic murein transglycosylase YP_006167028.1 5010998 D 595495 CDS YP_006167029.1 386703192 12761722 5013025..5013351 1 NC_017660.1 COG2973 Trp operon repressor; Trp operon repressor 5013351 trpR 12761722 trpR Escherichia coli KO11FL Trp operon repressor YP_006167029.1 5013025 D 595495 CDS YP_006167030.1 386703193 12761723 complement(5013393..5013914) 1 NC_017660.1 COG1986 Uncharacterized conserved protein; inosine/xanthosine triphosphatase 5013914 yjjX 12761723 yjjX Escherichia coli KO11FL inosine/xanthosine triphosphatase YP_006167030.1 5013393 R 595495 CDS YP_006167031.1 386703194 12761724 5013957..5014604 1 NC_017660.1 COG0406 Fructose-2,6-bisphosphatase; phosphoglycerate mutase 5014604 ytjC 12761724 ytjC Escherichia coli KO11FL phosphoglycerate mutase YP_006167031.1 5013957 D 595495 CDS YP_006167032.1 386703195 12761725 complement(5014601..5015470) 1 NC_017660.1 COG2207 AraC-type DNA-binding domain-containing proteins; right oriC-binding transcriptional activator 5015470 rob 12761725 rob Escherichia coli KO11FL right oriC-binding transcriptional activator YP_006167032.1 5014601 R 595495 CDS YP_006167033.1 386703196 12761726 5015681..5016154 1 NC_017660.1 COG3045 Uncharacterized protein conserved in bacteria; creA; hypothetical protein 5016154 12761726 KO11_23625 Escherichia coli KO11FL hypothetical protein YP_006167033.1 5015681 D 595495 CDS YP_006167034.1 386703197 12761727 5016167..5016856 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding response regulator CreB 5016856 creB 12761727 creB Escherichia coli KO11FL DNA-binding response regulator CreB YP_006167034.1 5016167 D 595495 CDS YP_006167035.1 386703198 12761728 5016856..5018280 1 NC_017660.1 COG0642 Signal transduction histidine kinase; sensory histidine kinase CreC 5018280 creC 12761728 creC Escherichia coli KO11FL sensory histidine kinase CreC YP_006167035.1 5016856 D 595495 CDS YP_006167036.1 386703199 12761729 5018338..5019690 1 NC_017660.1 COG4452 Inner membrane protein involved in colicin E2 resistance; inner membrane protein 5019690 creD 12761729 creD Escherichia coli KO11FL inner membrane protein YP_006167036.1 5018338 D 595495 CDS YP_006167037.1 386703200 12761730 complement(5019750..5020466) 1 NC_017660.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two-component response regulator 5020466 arcA 12761730 arcA Escherichia coli KO11FL two-component response regulator YP_006167037.1 5019750 R 595495 CDS YP_006167038.1 386703201 12761731 5021102..5021788 1 NC_017660.1 COG0565 rRNA methylase; putative RNA methyltransferase 5021788 yjtD 12761731 yjtD Escherichia coli KO11FL putative RNA methyltransferase YP_006167038.1 5021102 D 595495 CDS YP_006167039.1 386703203 12758883 complement(1..1008) 1 NC_017661.1 COG1131 ABC-type multidrug transport system, ATPase component; hypothetical protein 1008 12758883 KO11_23990 Escherichia coli KO11FL hypothetical protein YP_006167039.1 1 R 595495 CDS YP_006167040.1 386703204 12758884 1567..1821 1 NC_017661.1 hypothetical protein 1821 12758884 KO11_24000 Escherichia coli KO11FL hypothetical protein YP_006167040.1 1567 D 595495 CDS YP_006167041.1 386703205 12758885 1818..1922 1 NC_017661.1 hypothetical protein 1922 12758885 KO11_24005 Escherichia coli KO11FL hypothetical protein YP_006167041.1 1818 D 595495 CDS YP_006167042.1 386703206 12758886 1938..2030 1 NC_017661.1 hypothetical protein 2030 12758886 KO11_24010 Escherichia coli KO11FL hypothetical protein YP_006167042.1 1938 D 595495 CDS YP_006167043.1 386703207 12758887 complement(1998..2189) 1 NC_017661.1 regulatory protein Rop 2189 rom 12758887 rom Escherichia coli KO11FL regulatory protein Rop YP_006167043.1 1998 R 595495 CDS YP_006167044.1 386703208 12758888 2192..2578 1 NC_017661.1 mobilization protein MobC 2578 mobC 12758888 mobC Escherichia coli KO11FL mobilization protein MobC YP_006167044.1 2192 D 595495 CDS YP_006167045.1 386703209 12758889 2568..4121 1 NC_017661.1 mobilization protein MobA 4121 mobA 12758889 mobA Escherichia coli KO11FL mobilization protein MobA YP_006167045.1 2568 D 595495 CDS YP_006167046.1 386703210 12758890 3256..3774 1 NC_017661.1 mobilization protein MobB 3774 mobB 12758890 mobB Escherichia coli KO11FL mobilization protein MobB YP_006167046.1 3256 D 595495 CDS YP_006167047.1 386703211 12758891 3781..4014 1 NC_017661.1 mobilization protein MobD 4014 mobD 12758891 mobD Escherichia coli KO11FL mobilization protein MobD YP_006167047.1 3781 D 595495 CDS YP_006167048.1 386703212 12758892 4099..4206 1 NC_017661.1 mobilization protein 4206 12758892 KO11_24040 Escherichia coli KO11FL mobilization protein YP_006167048.1 4099 D 595495 CDS YP_006167049.1 386703213 12758893 4197..4328 1 NC_017661.1 hypothetical protein 4328 12758893 KO11_24045 Escherichia coli KO11FL hypothetical protein YP_006167049.1 4197 D 595495 CDS YP_006167050.1 386703214 12758882 complement(4379..5359) 1 NC_017661.1 hypothetical protein 5359 12758882 KO11_24050 Escherichia coli KO11FL hypothetical protein YP_006167050.1 4379 R 595495 CDS