-- dump date 20140619_082801 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 511145000001 SEQ_END SEQ_END NC_000913.3 4641652 4641652 DR NC_000913.3; contig end 4641652..4641652 Escherichia coli str. K-12 substr. MG1655 NP_414542.1 CDS thrL NC_000913.3 190 255 D thr operon leader peptide 190..255 Escherichia coli str. K-12 substr. MG1655 944742 NP_414543.1 CDS thrA NC_000913.3 337 2799 D bifunctional: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal); Bifunctional aspartokinase/homoserine dehydrogenase 1 337..2799 Escherichia coli str. K-12 substr. MG1655 945803 NP_414544.1 CDS thrB NC_000913.3 2801 3733 D homoserine kinase 2801..3733 Escherichia coli str. K-12 substr. MG1655 947498 NP_414545.1 CDS thrC NC_000913.3 3734 5020 D L-threonine synthase 3734..5020 Escherichia coli str. K-12 substr. MG1655 945198 NP_414546.1 CDS yaaX NC_000913.3 5234 5530 D DUF2502 family putative periplasmic protein 5234..5530 Escherichia coli str. K-12 substr. MG1655 944747 NP_414547.1 CDS yaaA NC_000913.3 5683 6459 R peroxide resistance protein, lowers intracellular iron complement(5683..6459) Escherichia coli str. K-12 substr. MG1655 944749 NP_414548.1 CDS yaaJ NC_000913.3 6529 7959 R inner membrane transport protein; putative transporter complement(6529..7959) Escherichia coli str. K-12 substr. MG1655 944745 NP_414549.1 CDS talB NC_000913.3 8238 9191 D transaldolase B 8238..9191 Escherichia coli str. K-12 substr. MG1655 944748 NP_414550.1 CDS mog NC_000913.3 9306 9893 D putative molybdochetalase in molybdopterine biosynthesis; molybdochelatase incorporating molybdenum into molybdopterin 9306..9893 Escherichia coli str. K-12 substr. MG1655 944760 NP_414551.1 CDS satP NC_000913.3 9928 10494 R succinate-acetate transporter complement(9928..10494) Escherichia coli str. K-12 substr. MG1655 944792 NP_414552.1 CDS yaaW NC_000913.3 10643 11356 R UPF0174 family protein complement(10643..11356) Escherichia coli str. K-12 substr. MG1655 944771 NP_414554.1 CDS yaaI NC_000913.3 11382 11786 R UPF0412 family protein complement(11382..11786) Escherichia coli str. K-12 substr. MG1655 944751 NP_414555.1 CDS dnaK NC_000913.3 12163 14079 D chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins; chaperone Hsp70, with co-chaperone DnaJ 12163..14079 Escherichia coli str. K-12 substr. MG1655 944750 NP_414556.1 CDS dnaJ NC_000913.3 14168 15298 D chaperone with DnaK; heat shock protein; chaperone Hsp40, DnaK co-chaperone 14168..15298 Escherichia coli str. K-12 substr. MG1655 944753 NP_414557.1 CDS insL1 NC_000913.3 15445 16557 D IS186 transposase 15445..16557 Escherichia coli str. K-12 substr. MG1655 944754 NP_414559.1 CDS mokC NC_000913.3 16751 16960 R regulatory peptide whose translation enables hokC (gef) expression; completely contained in another CDS; regulatory protein for HokC, overlaps CDS of hokC complement(16751..16960) Escherichia coli str. K-12 substr. MG1655 944756 YP_025292.1 CDS hokC NC_000913.3 16751 16903 R small toxic membrane polypeptide; completely contained in another CDS; toxic membrane protein, small complement(16751..16903) Escherichia coli str. K-12 substr. MG1655 2847744 NP_414560.1 CDS nhaA NC_000913.3 17489 18655 D Na+/H antiporter, pH dependent; sodium-proton antiporter 17489..18655 Escherichia coli str. K-12 substr. MG1655 944758 NP_414561.1 CDS nhaR NC_000913.3 18715 19620 D transcriptional activator of nhaA 18715..19620 Escherichia coli str. K-12 substr. MG1655 944757 NP_414562.1 CDS insB1 NC_000913.3 19811 20314 R IS1 transposase B complement(19811..20314) Escherichia coli str. K-12 substr. MG1655 944743 NP_414563.1 CDS insA NC_000913.3 20233 20508 R IS1 repressor TnpA complement(20233..20508) Escherichia coli str. K-12 substr. MG1655 948449 NP_414564.1 CDS rpsT NC_000913.3 20815 21078 R 30S ribosomal subunit protein S20 complement(20815..21078) Escherichia coli str. K-12 substr. MG1655 944759 NP_414565.1 CDS yaaY NC_000913.3 21181 21399 D uncharacterized protein 21181..21399 Escherichia coli str. K-12 substr. MG1655 949128 NP_414566.1 CDS ribF NC_000913.3 21407 22348 D bifunctional riboflavin kinase/FAD synthetase 21407..22348 Escherichia coli str. K-12 substr. MG1655 949129 NP_414567.1 CDS ileS NC_000913.3 22391 25207 D isoleucine tRNA synthetase; isoleucyl-tRNA synthetase 22391..25207 Escherichia coli str. K-12 substr. MG1655 944761 NP_414568.1 CDS lspA NC_000913.3 25207 25701 D prolipoprotein signal peptidase (SPase II); prolipoprotein signal peptidase (signal peptidase II) 25207..25701 Escherichia coli str. K-12 substr. MG1655 944800 NP_414569.1 CDS fkpB NC_000913.3 25826 26275 D FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 25826..26275 Escherichia coli str. K-12 substr. MG1655 944807 NP_414570.1 CDS ispH NC_000913.3 26277 27227 D 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein 26277..27227 Escherichia coli str. K-12 substr. MG1655 944777 NP_414571.1 CDS rihC NC_000913.3 27293 28207 D ribonucleoside hydrolase 3 27293..28207 Escherichia coli str. K-12 substr. MG1655 944796 NP_414572.1 CDS dapB NC_000913.3 28374 29195 D dihydrodipicolinate reductase 28374..29195 Escherichia coli str. K-12 substr. MG1655 944762 NP_414573.1 CDS carA NC_000913.3 29651 30799 D carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 29651..30799 Escherichia coli str. K-12 substr. MG1655 949025 NP_414574.1 CDS carB NC_000913.3 30817 34038 D carbamoyl-phosphate synthase large subunit 30817..34038 Escherichia coli str. K-12 substr. MG1655 944775 NP_414576.4 CDS caiF NC_000913.3 34300 34695 D transcriptional regulator of cai operon; cai operon transcriptional activator 34300..34695 Escherichia coli str. K-12 substr. MG1655 944795 NP_414577.2 CDS caiE NC_000913.3 34781 35371 R possible synthesis of cofactor for carnitine racemase and dehydratase; stimulator of CaiD and CaiB enzyme activities complement(34781..35371) Escherichia coli str. K-12 substr. MG1655 948999 NP_414578.2 CDS caiD NC_000913.3 35377 36162 R carnitine racemase; carnitinyl-CoA dehydratase complement(35377..36162) Escherichia coli str. K-12 substr. MG1655 948995 NP_414579.4 CDS caiC NC_000913.3 36271 37824 R probable crotonobetaine/carnitine-CoA ligase; putative crotonobetaine/carnitine-CoA ligase complement(36271..37824) Escherichia coli str. K-12 substr. MG1655 944886 NP_414580.1 CDS caiB NC_000913.3 37898 39115 R l-carnitine dehydratase; crotonobetainyl CoA:carnitine CoA transferase complement(37898..39115) Escherichia coli str. K-12 substr. MG1655 948997 NP_414581.1 CDS caiA NC_000913.3 39244 40386 R probable carnitine operon oxidoreductase; crotonobetaine reductase subunit II, FAD-binding complement(39244..40386) Escherichia coli str. K-12 substr. MG1655 949064 NP_414582.1 CDS caiT NC_000913.3 40417 41931 R probable carnitine transporter; putative transporter complement(40417..41931) Escherichia coli str. K-12 substr. MG1655 944765 NP_414583.2 CDS fixA NC_000913.3 42403 43173 D probable flavoprotein subunit, carnitine metabolism; anaerobic carnitine reduction putative electron transfer flavoprotein subunit 42403..43173 Escherichia coli str. K-12 substr. MG1655 947316 NP_414584.1 CDS fixB NC_000913.3 43188 44129 D probable flavoprotein subunit, carnitine metabolism; putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein 43188..44129 Escherichia coli str. K-12 substr. MG1655 948939 NP_414585.1 CDS fixC NC_000913.3 44180 45466 D flavoprotein; electron transport; putative oxidoreductase 44180..45466 Escherichia coli str. K-12 substr. MG1655 948958 NP_414586.1 CDS fixX NC_000913.3 45463 45750 D putative ferredoxin; putative 4Fe-4S ferredoxin-type protein 45463..45750 Escherichia coli str. K-12 substr. MG1655 948590 NP_414587.1 CDS yaaU NC_000913.3 45807 47138 D putative transport protein; putative transporter 45807..47138 Escherichia coli str. K-12 substr. MG1655 944766 NP_414588.1 CDS kefF NC_000913.3 47246 47776 D putative NAD(P)H oxidoreductase; potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, FMN-dependent 47246..47776 Escherichia coli str. K-12 substr. MG1655 944767 NP_414589.1 CDS kefC NC_000913.3 47769 49631 D K+ efflux antiporter, glutathione-regulated; potassium:proton antiporter 47769..49631 Escherichia coli str. K-12 substr. MG1655 944773 NP_414590.1 CDS folA NC_000913.3 49823 50302 D dihydrofolate reductase type I; trimethoprim resistance; dihydrofolate reductase 49823..50302 Escherichia coli str. K-12 substr. MG1655 944790 NP_414591.1 CDS apaH NC_000913.3 50380 51222 R diadenosine tetraphosphatase complement(50380..51222) Escherichia coli str. K-12 substr. MG1655 944770 NP_414592.1 CDS apaG NC_000913.3 51229 51606 R protein associated with Co2+ and Mg2+ efflux complement(51229..51606) Escherichia coli str. K-12 substr. MG1655 944772 NP_414593.1 CDS rsmA NC_000913.3 51609 52430 R 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent complement(51609..52430) Escherichia coli str. K-12 substr. MG1655 944939 NP_414594.1 CDS pdxA NC_000913.3 52427 53416 R pyridoxine biosynthesis; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent complement(52427..53416) Escherichia coli str. K-12 substr. MG1655 944919 NP_414595.1 CDS surA NC_000913.3 53416 54702 R survival protein; peptidyl-prolyl cis-trans isomerase (PPIase) complement(53416..54702) Escherichia coli str. K-12 substr. MG1655 944812 NP_414596.1 CDS lptD NC_000913.3 54755 57109 R organic solvent tolerance; LPS assembly OM complex LptDE, beta-barrel component complement(54755..57109) Escherichia coli str. K-12 substr. MG1655 945011 NP_414597.1 CDS djlA NC_000913.3 57364 58179 D membrane-anchored DnaK co-chaperone, DNA-binding protein 57364..58179 Escherichia coli str. K-12 substr. MG1655 948992 b4659 CDS yabP NC_000913.3 58474 59279 D pseudogene, pentapeptide repeats-containing; join(58474..59052,59052..59279) Escherichia coli str. K-12 substr. MG1655 944776 NP_414600.1 CDS rluA NC_000913.3 59687 60346 R dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent complement(59687..60346) Escherichia coli str. K-12 substr. MG1655 946262 NP_414601.1 CDS rapA NC_000913.3 60358 63264 R probable ATP-dependent RNA helicase; RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase complement(60358..63264) Escherichia coli str. K-12 substr. MG1655 948523 NP_414602.1 CDS polB NC_000913.3 63429 65780 R DNA polymerase II complement(63429..65780) Escherichia coli str. K-12 substr. MG1655 944779 NP_414603.1 CDS araD NC_000913.3 65855 66550 R L-ribulose-5-phosphate 4-epimerase complement(65855..66550) Escherichia coli str. K-12 substr. MG1655 945294 NP_414604.1 CDS araA NC_000913.3 66835 68337 R L-arabinose isomerase complement(66835..68337) Escherichia coli str. K-12 substr. MG1655 947511 NP_414605.1 CDS araB NC_000913.3 68348 70048 R L-ribulokinase complement(68348..70048) Escherichia coli str. K-12 substr. MG1655 946017 NP_414606.1 CDS araC NC_000913.3 70387 71265 D transcriptional regulator for ara operon; ara regulon transcriptional activator; autorepressor 70387..71265 Escherichia coli str. K-12 substr. MG1655 944780 NP_414607.1 CDS yabI NC_000913.3 71351 72115 D DedA family inner membrane protein 71351..72115 Escherichia coli str. K-12 substr. MG1655 944783 NP_414608.1 CDS thiQ NC_000913.3 72229 72927 R putative ATP-binding component of a transport system; thiamine, thiamine pyrophosphate ABC transporter ATPase; ThiBPQ thiamine, thiamine pyrophosphate importer complement(72229..72927) Escherichia coli str. K-12 substr. MG1655 944785 NP_414609.1 CDS thiP NC_000913.3 72911 74521 R thiamine, thiamine pyrophosphate ABC transporter permease; ThiBPQ thiamine, thiamine pyrophosphate importer complement(72911..74521) Escherichia coli str. K-12 substr. MG1655 944784 NP_414610.1 CDS thiB NC_000913.3 74497 75480 R thiamin-binding periplasmic protein; periplasmic-binding component of ABC superfamily; thiamine-, thiamine pyrophosphate-, thiamine monophosphate-binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer complement(74497..75480) Escherichia coli str. K-12 substr. MG1655 946306 NP_414611.1 CDS sgrR NC_000913.3 75644 77299 R putative transport protein; transcriptional DNA-binding transcriptional activator of sgrS sRNA complement(75644..77299) Escherichia coli str. K-12 substr. MG1655 944788 YP_002791237.1 CDS sgrT NC_000913.3 77388 77519 D inhibitor of glucose uptake 77388..77519 Escherichia coli str. K-12 substr. MG1655 7751624 YP_025293.1 CDS setA NC_000913.3 77621 78799 D broad specificity sugar efflux system 77621..78799 Escherichia coli str. K-12 substr. MG1655 944793 NP_414613.1 CDS leuD NC_000913.3 78848 79453 R isopropylmalate isomerase subunit; 3-isopropylmalate dehydratase small subunit complement(78848..79453) Escherichia coli str. K-12 substr. MG1655 945642 NP_414614.1 CDS leuC NC_000913.3 79464 80864 R 3-isopropylmalate isomerase (dehydratase) subunit; 3-isopropylmalate dehydratase large subunit complement(79464..80864) Escherichia coli str. K-12 substr. MG1655 945076 NP_414615.4 CDS leuB NC_000913.3 80867 81958 R 3-isopropylmalate dehydrogenase, NAD(+)-dependent complement(80867..81958) Escherichia coli str. K-12 substr. MG1655 944798 NP_414616.1 CDS leuA NC_000913.3 81958 83529 R 2-isopropylmalate synthase complement(81958..83529) Escherichia coli str. K-12 substr. MG1655 947465 NP_414617.1 CDS leuL NC_000913.3 83622 83708 R leu operon leader peptide complement(83622..83708) Escherichia coli str. K-12 substr. MG1655 946072 NP_414618.4 CDS leuO NC_000913.3 84368 85312 D probable transcriptional activator for leuABCD operon; global transcription factor 84368..85312 Escherichia coli str. K-12 substr. MG1655 949034 YP_025294.2 CDS ilvI NC_000913.3 85630 87354 D acetolactate synthase III, valine sensitive, large subunit; acetolactate synthase 3 large subunit 85630..87354 Escherichia coli str. K-12 substr. MG1655 948793 NP_414620.1 CDS ilvH NC_000913.3 87357 87848 D acetolactate synthase III, valine sensitive, small subunit; acetolactate synthase 3, small subunit, valine-sensitive 87357..87848 Escherichia coli str. K-12 substr. MG1655 947267 NP_414622.1 CDS cra NC_000913.3 88028 89032 D transcriptional repressor of fru operon and others; transcriptional repressor-activator for carbon metabolism 88028..89032 Escherichia coli str. K-12 substr. MG1655 944804 NP_414623.1 CDS mraZ NC_000913.3 89634 90092 D RsmH methytransferase inhibitor 89634..90092 Escherichia coli str. K-12 substr. MG1655 944810 NP_414624.1 CDS rsmH NC_000913.3 90094 91035 D putative apolipoprotein; 16S rRNA m(4)C1402 methyltransferase, SAM-dependent 90094..91035 Escherichia coli str. K-12 substr. MG1655 944806 NP_414625.1 CDS ftsL NC_000913.3 91032 91397 D cell division protein; ingrowth of wall at septum; membrane bound cell division protein at septum containing leucine zipper motif 91032..91397 Escherichia coli str. K-12 substr. MG1655 944803 NP_414626.1 CDS ftsI NC_000913.3 91413 93179 D septum formation; penicillin-binding protein 3; peptidoglycan synthetase; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) 91413..93179 Escherichia coli str. K-12 substr. MG1655 944799 NP_414627.1 CDS murE NC_000913.3 93166 94653 D UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase 93166..94653 Escherichia coli str. K-12 substr. MG1655 944791 NP_414628.1 CDS murF NC_000913.3 94650 96008 D UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase 94650..96008 Escherichia coli str. K-12 substr. MG1655 944813 NP_414629.1 CDS mraY NC_000913.3 96002 97084 D phospho-N-acetylmuramoyl-pentapeptide transferase?; phospho-N-acetylmuramoyl-pentapeptide transferase 96002..97084 Escherichia coli str. K-12 substr. MG1655 944814 NP_414630.1 CDS murD NC_000913.3 97087 98403 D UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 97087..98403 Escherichia coli str. K-12 substr. MG1655 944818 NP_414631.1 CDS ftsW NC_000913.3 98403 99647 D cell division; membrane protein involved in shape determination; lipid II flippase; integral membrane protein involved in stabilizing FstZ ring during cell division 98403..99647 Escherichia coli str. K-12 substr. MG1655 946322 NP_414632.1 CDS murG NC_000913.3 99644 100711 D N-acetylglucosaminyl transferase 99644..100711 Escherichia coli str. K-12 substr. MG1655 946321 NP_414633.1 CDS murC NC_000913.3 100765 102240 D UDP-N-acetylmuramate:L-alanine ligase 100765..102240 Escherichia coli str. K-12 substr. MG1655 946153 NP_414634.1 CDS ddlB NC_000913.3 102233 103153 D D-alanine-D-alanine ligase B, affects cell division; D-alanine:D-alanine ligase 102233..103153 Escherichia coli str. K-12 substr. MG1655 946324 NP_414635.1 CDS ftsQ NC_000913.3 103155 103985 D cell division protein; ingrowth of wall at septum; divisome assembly protein, membrane anchored protein involved in growth of wall at septum 103155..103985 Escherichia coli str. K-12 substr. MG1655 944823 NP_414636.1 CDS ftsA NC_000913.3 103982 105244 D ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes; ATP-binding cell division protein involved in recruitment of FtsK to Z ring 103982..105244 Escherichia coli str. K-12 substr. MG1655 944778 NP_414637.1 CDS ftsZ NC_000913.3 105305 106456 D cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase; GTP-binding tubulin-like cell division protein 105305..106456 Escherichia coli str. K-12 substr. MG1655 944786 NP_414638.1 CDS lpxC NC_000913.3 106557 107474 D UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis; UDP-3-O-acyl N-acetylglucosamine deacetylase 106557..107474 Escherichia coli str. K-12 substr. MG1655 944816 NP_414639.2 CDS secM NC_000913.3 107705 108217 D regulator of secA translation 107705..108217 Escherichia coli str. K-12 substr. MG1655 944831 NP_414640.1 CDS secA NC_000913.3 108279 110984 D preprotein translocase; secretion protein; preprotein translocase subunit, ATPase 108279..110984 Escherichia coli str. K-12 substr. MG1655 944821 NP_414641.1 CDS mutT NC_000913.3 111044 111433 D 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions; nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP 111044..111433 Escherichia coli str. K-12 substr. MG1655 944824 NP_414643.1 CDS yacG NC_000913.3 111649 111846 R DNA gyrase inhibitor complement(111649..111846) Escherichia coli str. K-12 substr. MG1655 945630 NP_414644.1 CDS zapD NC_000913.3 111856 112599 R FtsZ stabilizer complement(111856..112599) Escherichia coli str. K-12 substr. MG1655 944873 NP_414645.1 CDS coaE NC_000913.3 112599 113219 R putative DNA repair protein; dephospho-CoA kinase complement(112599..113219) Escherichia coli str. K-12 substr. MG1655 949060 NP_414646.1 CDS guaC NC_000913.3 113444 114487 D GMP reductase 113444..114487 Escherichia coli str. K-12 substr. MG1655 948986 NP_414648.1 CDS hofC NC_000913.3 114522 115724 R putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; assembly protein in type IV pilin biogenesis, transmembrane protein complement(114522..115724) Escherichia coli str. K-12 substr. MG1655 945806 NP_414649.1 CDS hofB NC_000913.3 115714 117099 R putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; T2SE secretion family protein; P-loop ATPase superfamily protein complement(115714..117099) Escherichia coli str. K-12 substr. MG1655 947481 NP_414650.1 CDS ppdD NC_000913.3 117109 117549 R prelipin peptidase dependent protein; putative prepilin peptidase-dependent pilin complement(117109..117549) Escherichia coli str. K-12 substr. MG1655 945817 NP_414651.1 CDS nadC NC_000913.3 117752 118645 R quinolinate phosphoribosyltransferase complement(117752..118645) Escherichia coli str. K-12 substr. MG1655 948869 NP_414652.1 CDS ampD NC_000913.3 118733 119284 D regulates ampC; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase 118733..119284 Escherichia coli str. K-12 substr. MG1655 948877 NP_414653.1 CDS ampE NC_000913.3 119281 120135 D regulates ampC; ampicillin resistance inner membrane protein; putative signaling protein in beta-lactamase regulation 119281..120135 Escherichia coli str. K-12 substr. MG1655 946678 NP_414654.1 CDS aroP NC_000913.3 120178 121551 R aromatic amino acid transport protein; aromatic amino acid transporter complement(120178..121551) Escherichia coli str. K-12 substr. MG1655 946018 NP_414655.1 CDS pdhR NC_000913.3 122092 122856 D transcriptional regulator for pyruvate dehydrogenase complex; pyruvate dehydrogenase complex repressor; autorepressor 122092..122856 Escherichia coli str. K-12 substr. MG1655 944827 NP_414656.1 CDS aceE NC_000913.3 123017 125680 D pyruvate dehydrogenase (decarboxylase component); pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 123017..125680 Escherichia coli str. K-12 substr. MG1655 944834 NP_414657.1 CDS aceF NC_000913.3 125695 127587 D pyruvate dehydrogenase (dihydrolipoyltransacetylase component); pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 125695..127587 Escherichia coli str. K-12 substr. MG1655 944794 NP_414658.1 CDS lpd NC_000913.3 127912 129336 D lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex; lipoamide dehydrogenase, E3 component is part of three enzyme complexes 127912..129336 Escherichia coli str. K-12 substr. MG1655 944854 NP_414659.1 CDS yacH NC_000913.3 129407 131260 R putative membrane protein; uncharacterized protein complement(129407..131260) Escherichia coli str. K-12 substr. MG1655 944868 NP_414660.1 CDS acnB NC_000913.3 131615 134212 D aconitate hydrase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 131615..134212 Escherichia coli str. K-12 substr. MG1655 944864 NP_414661.2 CDS yacL NC_000913.3 134388 134750 D UPF0231 family protein 134388..134750 Escherichia coli str. K-12 substr. MG1655 944809 NP_414662.1 CDS speD NC_000913.3 134788 135582 R S-adenosylmethionine decarboxylase complement(134788..135582) Escherichia coli str. K-12 substr. MG1655 947719 NP_414663.1 CDS speE NC_000913.3 135598 136464 R spermidine synthase = putrescine aminopropyltransferase; spermidine synthase (putrescine aminopropyltransferase) complement(135598..136464) Escherichia coli str. K-12 substr. MG1655 947726 NP_414664.4 CDS yacC NC_000913.3 136570 136917 R PulS_OutS family protein complement(136570..136917) Escherichia coli str. K-12 substr. MG1655 948472 NP_414665.1 CDS cueO NC_000913.3 137083 138633 D multicopper oxidase (laccase) 137083..138633 Escherichia coli str. K-12 substr. MG1655 947736 NP_414666.1 CDS gcd NC_000913.3 138835 141225 R glucose dehydrogenase complement(138835..141225) Escherichia coli str. K-12 substr. MG1655 944830 NP_414667.4 CDS hpt NC_000913.3 141431 141967 D hypoxanthine phosphoribosyltransferase 141431..141967 Escherichia coli str. K-12 substr. MG1655 946624 NP_414668.1 CDS can NC_000913.3 142008 142670 R putative carbonic anhdrase; carbonic anhydrase complement(142008..142670) Escherichia coli str. K-12 substr. MG1655 944832 NP_414669.1 CDS yadG NC_000913.3 142779 143705 D putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit 142779..143705 Escherichia coli str. K-12 substr. MG1655 944833 NP_414670.1 CDS yadH NC_000913.3 143702 144472 D inner membrane putative ABC superfamily transporter permease 143702..144472 Escherichia coli str. K-12 substr. MG1655 944836 NP_414671.1 CDS yadI NC_000913.3 144577 145017 D putative PTS enzyme II B component; putative PTS Enzyme IIA 144577..145017 Escherichia coli str. K-12 substr. MG1655 947397 NP_414672.1 CDS yadE NC_000913.3 145081 146310 D conserved hypothetical protein; putative polysaccharide deacetylase lipoprotein 145081..146310 Escherichia coli str. K-12 substr. MG1655 946536 NP_414673.1 CDS panD NC_000913.3 146314 146694 R aspartate 1-decarboxylase complement(146314..146694) Escherichia coli str. K-12 substr. MG1655 945686 NP_414674.1 CDS yadD NC_000913.3 146968 147870 D transposase_31 family protein 146968..147870 Escherichia coli str. K-12 substr. MG1655 944781 NP_414675.1 CDS panC NC_000913.3 147944 148795 R pantothenate synthetase complement(147944..148795) Escherichia coli str. K-12 substr. MG1655 944958 NP_414676.1 CDS panB NC_000913.3 148807 149601 R 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(148807..149601) Escherichia coli str. K-12 substr. MG1655 944839 NP_414677.1 CDS yadC NC_000913.3 149715 150953 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(149715..150953) Escherichia coli str. K-12 substr. MG1655 944837 NP_414678.1 CDS yadK NC_000913.3 151003 151599 R putative fimbrial protein; putative fimbrial-like adhesin protein complement(151003..151599) Escherichia coli str. K-12 substr. MG1655 944835 NP_414679.1 CDS yadL NC_000913.3 151626 152231 R putative fimbrial protein; putative fimbrial-like adhesin protein complement(151626..152231) Escherichia coli str. K-12 substr. MG1655 944829 NP_414680.4 CDS yadM NC_000913.3 152243 152812 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(152243..152812) Escherichia coli str. K-12 substr. MG1655 944828 NP_414681.1 CDS htrE NC_000913.3 152829 155426 R probable outer membrane porin protein involved in fimbrial assembly; putative outer membrane usher protein complement(152829..155426) Escherichia coli str. K-12 substr. MG1655 944819 NP_414682.1 CDS yadV NC_000913.3 155461 156201 R probable pilin chaperone similar to PapD; putative periplasmic pilin chaperone complement(155461..156201) Escherichia coli str. K-12 substr. MG1655 944859 NP_414683.1 CDS yadN NC_000913.3 156299 156883 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(156299..156883) Escherichia coli str. K-12 substr. MG1655 944841 NP_414684.1 CDS folK NC_000913.3 157253 157732 R 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase complement(157253..157732) Escherichia coli str. K-12 substr. MG1655 948792 NP_414685.4 CDS pcnB NC_000913.3 157729 159126 R poly(A) polymerase complement(157729..159126) Escherichia coli str. K-12 substr. MG1655 947318 NP_414686.3 CDS gluQ NC_000913.3 159186 160112 R putative tRNA synthetase; glutamyl-Q tRNA(Asp) synthetase complement(159186..160112) Escherichia coli str. K-12 substr. MG1655 944846 NP_414687.1 CDS dksA NC_000913.3 160149 160604 R dnaK suppressor protein; transcriptional regulator of rRNA transcription, DnaK suppressor protein complement(160149..160604) Escherichia coli str. K-12 substr. MG1655 944850 NP_414688.1 CDS sfsA NC_000913.3 160782 161486 R probable regulator for maltose metabolism; sugar fermentation stimulation protein A complement(160782..161486) Escherichia coli str. K-12 substr. MG1655 944855 NP_414689.4 CDS ligT NC_000913.3 161501 162031 R 2'-5' RNA ligase complement(161501..162031) Escherichia coli str. K-12 substr. MG1655 944848 NP_414690.4 CDS hrpB NC_000913.3 162105 164534 D helicase, ATP-dependent; putative ATP-dependent helicase 162105..164534 Escherichia coli str. K-12 substr. MG1655 944845 NP_414691.1 CDS mrcB NC_000913.3 164730 167264 D peptidoglycan synthetase; penicillin-binding protein 1B; fused glycosyl transferase and transpeptidase 164730..167264 Escherichia coli str. K-12 substr. MG1655 944843 NP_414692.1 CDS fhuA NC_000913.3 167484 169727 D outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80; ferrichrome outer membrane transporter 167484..169727 Escherichia coli str. K-12 substr. MG1655 944856 NP_414693.1 CDS fhuC NC_000913.3 169778 170575 D ATP-binding component of hydroxymate-dependent iron transport; iron-hydroxamate transporter subunit 169778..170575 Escherichia coli str. K-12 substr. MG1655 945250 NP_414694.1 CDS fhuD NC_000913.3 170575 171465 D hydroxamate-dependent iron uptake, cytoplasmic membrane component; periplasmic-binding component of ABC superfamily; iron-hydroxamate transporter subunit 170575..171465 Escherichia coli str. K-12 substr. MG1655 947510 NP_414695.1 CDS fhuB NC_000913.3 171462 173444 D fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components 171462..173444 Escherichia coli str. K-12 substr. MG1655 946890 NP_414696.1 CDS hemL NC_000913.3 173602 174882 R glutamate-1-semialdehyde aminotransferase (aminomutase) complement(173602..174882) Escherichia coli str. K-12 substr. MG1655 946892 NP_414697.1 CDS clcA NC_000913.3 175107 176528 D putative channel transporter; H(+)/Cl(-) exchange transporter 175107..176528 Escherichia coli str. K-12 substr. MG1655 946715 NP_414698.1 CDS erpA NC_000913.3 176610 176954 D iron-sulfur cluster insertion protein 176610..176954 Escherichia coli str. K-12 substr. MG1655 944857 NP_414699.1 CDS yadS NC_000913.3 177001 177624 R UPF0126 family inner membrane protein complement(177001..177624) Escherichia coli str. K-12 substr. MG1655 949062 NP_414700.1 CDS btuF NC_000913.3 177662 178462 R vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily complement(177662..178462) Escherichia coli str. K-12 substr. MG1655 947574 NP_414701.1 CDS mtn NC_000913.3 178455 179153 R 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(178455..179153) Escherichia coli str. K-12 substr. MG1655 948542 NP_414702.1 CDS dgt NC_000913.3 179237 180754 D deoxyguanosine triphosphate triphosphohydrolase 179237..180754 Escherichia coli str. K-12 substr. MG1655 947177 NP_414703.1 CDS degP NC_000913.3 180884 182308 D periplasmic serine protease Do; heat shock protein HtrA; serine endoprotease (protease Do), membrane-associated 180884..182308 Escherichia coli str. K-12 substr. MG1655 947139 NP_414704.4 CDS cdaR NC_000913.3 182463 183620 D carbohydrate diacid regulon transcriptional regulator; autoregulator 182463..183620 Escherichia coli str. K-12 substr. MG1655 944860 NP_414705.1 CDS yaeH NC_000913.3 183709 184095 R putative structural protein; UPF0325 family protein complement(183709..184095) Escherichia coli str. K-12 substr. MG1655 947044 NP_414706.2 CDS yaeI NC_000913.3 184257 185069 R phosphodiesterase with model substrate bis-pNPP complement(184257..185069) Escherichia coli str. K-12 substr. MG1655 945002 NP_414708.1 CDS dapD NC_000913.3 185123 185947 R 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase complement(185123..185947) Escherichia coli str. K-12 substr. MG1655 944862 NP_414709.1 CDS glnD NC_000913.3 185978 188650 R protein PII; uridylyltransferase acts on regulator of glnA; uridylyltransferase complement(185978..188650) Escherichia coli str. K-12 substr. MG1655 944863 NP_414710.1 CDS map NC_000913.3 188712 189506 R methionine aminopeptidase complement(188712..189506) Escherichia coli str. K-12 substr. MG1655 947882 NP_414711.1 CDS rpsB NC_000913.3 189874 190599 D 30S ribosomal subunit protein S2 189874..190599 Escherichia coli str. K-12 substr. MG1655 947874 NP_414712.1 CDS tsf NC_000913.3 190857 191708 D translation elongation factor EF-Ts 190857..191708 Escherichia coli str. K-12 substr. MG1655 944866 NP_414713.1 CDS pyrH NC_000913.3 191855 192580 D uridylate kinase 191855..192580 Escherichia coli str. K-12 substr. MG1655 944989 NP_414714.1 CDS frr NC_000913.3 192872 193429 D ribosome releasing factor; ribosome recycling factor 192872..193429 Escherichia coli str. K-12 substr. MG1655 946122 NP_414715.1 CDS dxr NC_000913.3 193521 194717 D 1-deoxy-D-xylulose 5-phosphate reductoisomerase 193521..194717 Escherichia coli str. K-12 substr. MG1655 945019 NP_414716.1 CDS ispU NC_000913.3 194903 195664 D undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase); undecaprenyl pyrophosphate synthase 194903..195664 Escherichia coli str. K-12 substr. MG1655 944874 NP_414717.2 CDS cdsA NC_000913.3 195677 196534 D CDP-diglyceride synthetase; CDP-diglyceride synthase 195677..196534 Escherichia coli str. K-12 substr. MG1655 944876 NP_414718.1 CDS rseP NC_000913.3 196546 197898 D inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease 196546..197898 Escherichia coli str. K-12 substr. MG1655 944871 NP_414719.1 CDS bamA NC_000913.3 197928 200360 D putative outer membrane antigen; BamABCDE complex OM biogenesis outer membrane pore-forming assembly factor 197928..200360 Escherichia coli str. K-12 substr. MG1655 944870 NP_414720.1 CDS skp NC_000913.3 200482 200967 D periplasmic molecular chaperone for outer membrane proteins; periplasmic chaperone 200482..200967 Escherichia coli str. K-12 substr. MG1655 944861 NP_414721.1 CDS lpxD NC_000913.3 200971 201996 D UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase 200971..201996 Escherichia coli str. K-12 substr. MG1655 944882 NP_414722.1 CDS fabZ NC_000913.3 202101 202556 D (3R)-hydroxymyristol acyl carrier protein dehydratase 202101..202556 Escherichia coli str. K-12 substr. MG1655 944888 NP_414723.1 CDS lpxA NC_000913.3 202560 203348 D UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis; UDP-N-acetylglucosamine acetyltransferase 202560..203348 Escherichia coli str. K-12 substr. MG1655 944849 NP_414724.1 CDS lpxB NC_000913.3 203348 204496 D tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step; tetraacyldisaccharide-1-P synthase 203348..204496 Escherichia coli str. K-12 substr. MG1655 944838 NP_414725.1 CDS rnhB NC_000913.3 204493 205089 D RNAse HII, degrades RNA of DNA-RNA hybrids; ribonuclease HII, degrades RNA of DNA-RNA hybrids 204493..205089 Escherichia coli str. K-12 substr. MG1655 944852 NP_414726.1 CDS dnaE NC_000913.3 205126 208608 D DNA polymerase III, alpha subunit; DNA polymerase III alpha subunit 205126..208608 Escherichia coli str. K-12 substr. MG1655 944877 NP_414727.1 CDS accA NC_000913.3 208621 209580 D acetylCoA carboxylase, carboxytransferase component, alpha subunit; acetyl-CoA carboxylase, carboxytransferase, alpha subunit 208621..209580 Escherichia coli str. K-12 substr. MG1655 944895 NP_414728.1 CDS ldcC NC_000913.3 209679 211820 D lysine decarboxylase 2, constitutive 209679..211820 Escherichia coli str. K-12 substr. MG1655 944887 NP_414729.4 CDS yaeR NC_000913.3 211877 212266 D putative lyase 211877..212266 Escherichia coli str. K-12 substr. MG1655 944875 NP_414730.1 CDS tilS NC_000913.3 212331 213629 D tRNA(Ile)-lysidine synthetase 212331..213629 Escherichia coli str. K-12 substr. MG1655 944889 NP_414731.2 CDS rof NC_000913.3 213678 213932 R modulator of Rho-dependent transcription termination complement(213678..213932) Escherichia coli str. K-12 substr. MG1655 944891 YP_026160.1 CDS yaeP NC_000913.3 213925 214125 R conserved hypothetical protein; UPF0253 family protein complement(213925..214125) Escherichia coli str. K-12 substr. MG1655 1450233 NP_414732.1 CDS yaeQ NC_000913.3 214291 214836 D PDDEXK superfamily protein 214291..214836 Escherichia coli str. K-12 substr. MG1655 946809 NP_414733.1 CDS arfB NC_000913.3 214833 215255 D alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached 214833..215255 Escherichia coli str. K-12 substr. MG1655 946046 NP_414734.1 CDS nlpE NC_000913.3 215269 215979 D copper homeostasis protein (lipoprotein); lipoprotein involved with copper homeostasis and adhesion 215269..215979 Escherichia coli str. K-12 substr. MG1655 946782 NP_414735.4 CDS yaeF NC_000913.3 216179 217003 R putative lipoprotein complement(216179..217003) Escherichia coli str. K-12 substr. MG1655 944892 NP_414736.1 CDS proS NC_000913.3 217057 218775 R proline tRNA synthetase; prolyl-tRNA synthetase complement(217057..218775) Escherichia coli str. K-12 substr. MG1655 949116 NP_414737.1 CDS tsaA NC_000913.3 218887 219594 R tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent complement(218887..219594) Escherichia coli str. K-12 substr. MG1655 949112 NP_414738.1 CDS rcsF NC_000913.3 219591 219995 R regulator in colanic acid synthesis; interacts with RcsB; putative outer membrane protein complement(219591..219995) Escherichia coli str. K-12 substr. MG1655 949113 NP_414739.1 CDS metQ NC_000913.3 220113 220928 R D-methionine transport protein (ABC superfamily, peri_bind); DL-methionine transporter subunit complement(220113..220928) Escherichia coli str. K-12 substr. MG1655 944893 NP_414740.1 CDS metI NC_000913.3 220968 221621 R D- and L-methionine transport protein (ABC superfamily, membrane); DL-methionine transporter subunit complement(220968..221621) Escherichia coli str. K-12 substr. MG1655 944894 NP_414741.1 CDS metN NC_000913.3 221614 222645 R D- and L-methionine transport protein (ABC superfamily, atp_bind); DL-methionine transporter subunit complement(221614..222645) Escherichia coli str. K-12 substr. MG1655 944896 NP_414742.1 CDS gmhB NC_000913.3 222833 223408 D D,D-heptose 1,7-bisphosphate phosphatase 222833..223408 Escherichia coli str. K-12 substr. MG1655 944879 NP_414743.1 CDS dkgB NC_000913.3 229167 229970 D 2,5-diketo-D-gluconate reductase B 229167..229970 Escherichia coli str. K-12 substr. MG1655 944901 NP_414744.1 CDS yafC NC_000913.3 229967 230881 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(229967..230881) Escherichia coli str. K-12 substr. MG1655 947507 NP_414745.1 CDS yafD NC_000913.3 231122 231922 D endo/exonuclease/phosphatase family protein 231122..231922 Escherichia coli str. K-12 substr. MG1655 946286 NP_414746.1 CDS yafE NC_000913.3 231926 232549 D putative biotin synthesis protein; putative S-adenosyl-L-methionine-dependent methyltransferase 231926..232549 Escherichia coli str. K-12 substr. MG1655 946197 NP_414747.1 CDS mltD NC_000913.3 232597 233955 R putative membrane-bound lytic murein transglycosylase D complement(232597..233955) Escherichia coli str. K-12 substr. MG1655 945694 NP_414748.1 CDS gloB NC_000913.3 234027 234782 R probable hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase complement(234027..234782) Escherichia coli str. K-12 substr. MG1655 944902 NP_414749.2 CDS yafS NC_000913.3 234816 235538 D putative S-adenosyl-L-methionine-dependent methyltransferase 234816..235538 Escherichia coli str. K-12 substr. MG1655 944903 NP_414750.1 CDS rnhA NC_000913.3 235535 236002 R RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication; ribonuclease HI, degrades RNA of DNA-RNA hybrids complement(235535..236002) Escherichia coli str. K-12 substr. MG1655 946955 NP_414751.1 CDS dnaQ NC_000913.3 236067 236798 D DNA polymerase III, epsilon subunit; DNA polymerase III epsilon subunit 236067..236798 Escherichia coli str. K-12 substr. MG1655 946441 NP_414752.1 CDS yafT NC_000913.3 237335 238120 D putative aminopeptidase; lipoprotein 237335..238120 Escherichia coli str. K-12 substr. MG1655 949009 YP_001165307.1 CDS ykfM NC_000913.3 238257 238736 R lethality reduction protein, putative inner membrane protein complement(238257..238736) Escherichia coli str. K-12 substr. MG1655 5061498 b0218 CDS yafU NC_000913.3 238746 239102 R pseudogene; complement(238746..239102) Escherichia coli str. K-12 substr. MG1655 946644 b4503 CDS yafF NC_000913.3 239106 239378 D pseudogene, H repeat-associated protein; 239106..239378 Escherichia coli str. K-12 substr. MG1655 1450235 NP_414754.1 CDS yafV NC_000913.3 239419 240189 R putative EC 3.5. amidase-type enzyme; putative NAD(P)-binding C-N hydrolase family amidase complement(239419..240189) Escherichia coli str. K-12 substr. MG1655 946585 NP_414755.1 CDS ivy NC_000913.3 240343 240816 D inhibitor of vertebrate C-type lysozyme, periplasmic; inhibitor of c-type lysozyme, periplasmic 240343..240816 Escherichia coli str. K-12 substr. MG1655 946530 NP_414756.2 CDS fadE NC_000913.3 240859 243303 R acyl coenzyme A dehydrogenase complement(240859..243303) Escherichia coli str. K-12 substr. MG1655 949007 NP_414757.1 CDS gmhA NC_000913.3 243543 244121 D phosphoheptose isomerase; D-sedoheptulose 7-phosphate isomerase 243543..244121 Escherichia coli str. K-12 substr. MG1655 949134 NP_414758.1 CDS yafJ NC_000913.3 244327 245094 D putative amidotransferase; putative amidotransfease 244327..245094 Escherichia coli str. K-12 substr. MG1655 944906 NP_414759.1 CDS yafK NC_000913.3 245065 245805 R L,D-transpeptidase-related protein complement(245065..245805) Escherichia coli str. K-12 substr. MG1655 944910 NP_414760.1 CDS yafQ NC_000913.3 245961 246239 R translation inhibitor toxin of toxin-antitoxin pair YafQ/DinJ complement(245961..246239) Escherichia coli str. K-12 substr. MG1655 944911 NP_414761.1 CDS dinJ NC_000913.3 246242 246502 R damage-inducible protein J; antitoxin of YafQ-DinJ toxin-antitoxin system complement(246242..246502) Escherichia coli str. K-12 substr. MG1655 944914 NP_414762.1 CDS yafL NC_000913.3 246712 247461 D putative lipoprotein; putative lipoprotein and C40 family peptidase 246712..247461 Escherichia coli str. K-12 substr. MG1655 944899 NP_414763.1 CDS rayT NC_000913.3 247637 248134 D RAYT REP element-mobilizing transposase; TnpA(REP) 247637..248134 Escherichia coli str. K-12 substr. MG1655 944913 b0229 CDS lfhA NC_000913.3 248358 250070 R pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis; complement(248358..250070) Escherichia coli str. K-12 substr. MG1655 944908 b0230 CDS lafU NC_000913.3 250072 250827 D pseudogene, lateral flagellar motor protein fragment; 250072..250827 Escherichia coli str. K-12 substr. MG1655 944921 NP_414766.1 CDS dinB NC_000913.3 250898 251953 D DNA polymerase IV; DNA polymerase IV, devoid of proofreading, damage-inducible protein P; DNA polymerase IV 250898..251953 Escherichia coli str. K-12 substr. MG1655 944922 NP_414767.1 CDS yafN NC_000913.3 252005 252298 D antitoxin of the YafO-YafN toxin-antitoxin system 252005..252298 Escherichia coli str. K-12 substr. MG1655 944920 NP_414768.1 CDS yafO NC_000913.3 252301 252699 D mRNA interferase toxin of the YafO-YafN toxin-antitoxin system 252301..252699 Escherichia coli str. K-12 substr. MG1655 944916 NP_414769.1 CDS yafP NC_000913.3 252709 253161 D putative acyl-CoA transferase 252709..253161 Escherichia coli str. K-12 substr. MG1655 944912 b0235 CDS ykfJ NC_000913.3 253479 253685 D pseudogene; 253479..253685 Escherichia coli str. K-12 substr. MG1655 944924 b0236 CDS prfH NC_000913.3 253702 254202 D pseudogene, RF-1 domain family; probable peptide chain release factor; 253702..254202 Escherichia coli str. K-12 substr. MG1655 947374 NP_414772.1 CDS pepD NC_000913.3 254259 255716 R aminoacyl-histidine dipeptidase (peptidase D) complement(254259..255716) Escherichia coli str. K-12 substr. MG1655 945013 NP_414773.1 CDS gpt NC_000913.3 255977 256435 D xanthine phosphoribosyltransferase; xanthine-guanine phosphoribosyltransferase 255977..256435 Escherichia coli str. K-12 substr. MG1655 944817 NP_414774.1 CDS frsA NC_000913.3 256527 257771 D fermentation-respiration switch protein; PTS Enzyme IIA(Glc)-binding protein; pNP-butyrate esterase activity 256527..257771 Escherichia coli str. K-12 substr. MG1655 946039 b0240 CDS crl NC_000913.3 257829 259006 D pseudogene, sigma factor-binding protein, stimulates RNA polymerase holoenzyme formation;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers; join(257829..257899,258676..259006) Escherichia coli str. K-12 substr. MG1655 945077 NP_414776.1 CDS phoE NC_000913.3 259045 260100 R outer membrane pore protein E (E,Ic,NmpAB); outer membrane phosphoporin protein E complement(259045..260100) Escherichia coli str. K-12 substr. MG1655 944926 NP_414777.1 CDS proB NC_000913.3 260388 261491 D gamma-glutamate kinase 260388..261491 Escherichia coli str. K-12 substr. MG1655 946425 NP_414778.1 CDS proA NC_000913.3 261503 262756 D gamma-glutamylphosphate reductase 261503..262756 Escherichia coli str. K-12 substr. MG1655 946680 b4626 CDS ykfN NC_000913.3 263150 263212 R pseudogene, YdiA family; complement(263150..263212) Escherichia coli str. K-12 substr. MG1655 5625552 NP_414779.1 CDS ykfI NC_000913.3 263328 263669 R CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system complement(263328..263669) Escherichia coli str. K-12 substr. MG1655 946726 NP_414780.1 CDS yafW NC_000913.3 263690 264007 R CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system complement(263690..264007) Escherichia coli str. K-12 substr. MG1655 944929 YP_588435.1 CDS ykfH NC_000913.3 264026 264247 R uncharacterized protein complement(264026..264247) Escherichia coli str. K-12 substr. MG1655 1450236 NP_414781.1 CDS ykfG NC_000913.3 264256 264732 R putative DNA repair protein; CP4-6 prophage; RadC-like JAB domain protein complement(264256..264732) Escherichia coli str. K-12 substr. MG1655 944930 NP_414782.1 CDS yafX NC_000913.3 264748 265206 R CP4-6 prophage; uncharacterized protein complement(264748..265206) Escherichia coli str. K-12 substr. MG1655 944931 NP_414783.1 CDS ykfF NC_000913.3 265304 265543 R CP4-6 prophage; uncharacterized protein complement(265304..265543) Escherichia coli str. K-12 substr. MG1655 948839 NP_414784.1 CDS ykfB NC_000913.3 265620 266087 R CP4-6 prophage; uncharacterized protein complement(265620..266087) Escherichia coli str. K-12 substr. MG1655 946846 NP_414785.4 CDS yafY NC_000913.3 266110 266553 R hypothetical transcriptional regulator; lipoprotein, inner membrane; overproduction stimulates degP expression; CP4-6 prophage complement(266110..266553) Escherichia coli str. K-12 substr. MG1655 944934 b4627 CDS ykfL NC_000913.3 266553 266774 R pseudogene, CP4-6 putative prophage remnant;Phage or Prophage Related; complement(266553..266774) Escherichia coli str. K-12 substr. MG1655 5625553 b4628 CDS ykfK NC_000913.3 266776 266967 R CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; complement(266776..266967) Escherichia coli str. K-12 substr. MG1655 5625554 NP_414786.4 CDS yafZ NC_000913.3 267184 268005 R CP4-6 prophage; conserved protein complement(267184..268005) Escherichia coli str. K-12 substr. MG1655 945373 NP_414787.4 CDS ykfA NC_000913.3 268097 268960 R putative GTP-binding protein; CP4-6 prophage; putative GTP-binding protein complement(268097..268960) Escherichia coli str. K-12 substr. MG1655 949004 NP_414788.1 CDS perR NC_000913.3 269289 270182 R peroxide resistance protein; CP4-6 prophage; putative DNA-binding transcriptional regulator complement(269289..270182) Escherichia coli str. K-12 substr. MG1655 945417 b4587 CDS insN NC_000913.3 270278 272189 D pseudogene, IS911 transposase A;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; join(270278..270535,271764..272189) Escherichia coli str. K-12 substr. MG1655 5061501 NP_414790.1 CDS insI1 NC_000913.3 270603 271754 D IS30 transposase 270603..271754 Escherichia coli str. K-12 substr. MG1655 949005 b0258 CDS ykfC NC_000913.3 272847 273954 D CP4-6 prophage; conserved protein;Phage or Prophage Related; 272847..273954 Escherichia coli str. K-12 substr. MG1655 944940 NP_414793.1 CDS insH1 NC_000913.3 274101 275117 R IS5 transposase and trans-activator complement(274101..275117) Escherichia coli str. K-12 substr. MG1655 944941 NP_414794.4 CDS mmuP NC_000913.3 275325 276728 D CP4-6 prophage; putative S-methylmethionine transporter 275325..276728 Escherichia coli str. K-12 substr. MG1655 946284 NP_414795.1 CDS mmuM NC_000913.3 276715 277647 D CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase 276715..277647 Escherichia coli str. K-12 substr. MG1655 946143 NP_414796.2 CDS afuC NC_000913.3 277756 278802 R putative ATP-binding component of a transport system; CP4-6 prophage; putative ferric transporter subunit complement(277756..278802) Escherichia coli str. K-12 substr. MG1655 947676 b0263 CDS afuB NC_000913.3 278814 279161 R pseudogene, CP4-6 prophage; ABC transporter permease family;Phage or Prophage Related; complement(278814..279161) Escherichia coli str. K-12 substr. MG1655 947073 NP_414798.1 CDS insB1 NC_000913.3 279178 279681 R IS1 transposase B complement(279178..279681) Escherichia coli str. K-12 substr. MG1655 947698 NP_414799.1 CDS insA NC_000913.3 279600 279875 R IS1 repressor TnpA complement(279600..279875) Escherichia coli str. K-12 substr. MG1655 944946 b4708 CDS insI1 NC_000913.3 279931 280104 D IS30 transposase;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; 279931..280104 Escherichia coli str. K-12 substr. MG1655 14678508 b4505 CDS insX NC_000913.3 280114 280362 R pseudogene, IS3 family transposase family; complement(280114..280362) Escherichia coli str. K-12 substr. MG1655 1450237 b0266 CDS yagB NC_000913.3 280427 280735 R pseudogene, CP4-6 prophage;Phage or Prophage Related; complement(280427..280735) Escherichia coli str. K-12 substr. MG1655 944944 NP_414801.1 CDS yagA NC_000913.3 280829 281983 R CP4-6 prophage; putative DNA-binding transcriptional regulator complement(280829..281983) Escherichia coli str. K-12 substr. MG1655 944937 NP_414802.2 CDS yagE NC_000913.3 282278 283186 D putative lyase/synthase; 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage 282278..283186 Escherichia coli str. K-12 substr. MG1655 944925 NP_414803.1 CDS yagF NC_000913.3 283201 285168 D putative dehydratase; CP4-6 prophage; dehydratase family protein 283201..285168 Escherichia coli str. K-12 substr. MG1655 944928 NP_414804.1 CDS yagG NC_000913.3 285395 286777 D putative permease; CP4-6 prophage; putative sugar transporter 285395..286777 Escherichia coli str. K-12 substr. MG1655 944947 NP_414805.1 CDS yagH NC_000913.3 286789 288399 D putative beta-xylosidase; CP4-6 prophage; putative xylosidase/arabinosidase 286789..288399 Escherichia coli str. K-12 substr. MG1655 944949 NP_414806.1 CDS yagI NC_000913.3 288404 289162 R putative regulator; CP4-6 prophage; putative DNA-binding transcriptional regulator complement(288404..289162) Escherichia coli str. K-12 substr. MG1655 945016 NP_414807.1 CDS argF NC_000913.3 289301 290305 R ornithine carbamoyltransferase 2, chain F; ornithine carbamoyltransferase 2, chain F; CP4-6 prophage complement(289301..290305) Escherichia coli str. K-12 substr. MG1655 944844 b4688 CDS ykgS NC_000913.3 290429 290633 D pseudogene; 290429..290633 Escherichia coli str. K-12 substr. MG1655 7751632 NP_414808.1 CDS insB1 NC_000913.3 290649 291152 R IS1 transposase B complement(290649..291152) Escherichia coli str. K-12 substr. MG1655 944950 NP_414809.1 CDS insA NC_000913.3 291071 291346 R IS1 repressor TnpA complement(291071..291346) Escherichia coli str. K-12 substr. MG1655 944951 b0276 CDS yagJ NC_000913.3 291404 292231 D CP4-6 prophage; uncharacterized protein;Phage or Prophage Related; 291404..292231 Escherichia coli str. K-12 substr. MG1655 949094 NP_414811.1 CDS yagK NC_000913.3 292322 292948 R CP4-6 prophage; conserved protein complement(292322..292948) Escherichia coli str. K-12 substr. MG1655 945847 NP_414812.1 CDS yagL NC_000913.3 293220 293918 R DNA-binding protein; CP4-6 prophage; DNA-binding protein complement(293220..293918) Escherichia coli str. K-12 substr. MG1655 945845 NP_414813.1 CDS yagM NC_000913.3 293945 294799 R CP4-6 prophage; uncharacterized protein complement(293945..294799) Escherichia coli str. K-12 substr. MG1655 944959 NP_414814.1 CDS yagN NC_000913.3 295139 295579 R CP4-6 prophage; uncharacterized protein complement(295139..295579) Escherichia coli str. K-12 substr. MG1655 945349 NP_414815.1 CDS intF NC_000913.3 295696 297096 R putative phage integrase; CP4-6 prophage; putative phage integrase complement(295696..297096) Escherichia coli str. K-12 substr. MG1655 947351 b4694 CDS yagP NC_000913.3 297381 297719 R pseudogene, LysR family, fragment;putative regulator; Not classified; putative transcriptional regulator LYSR-type; complement(297381..297719) Escherichia coli str. K-12 substr. MG1655 7751633 b4695 CDS ykgT NC_000913.3 297714 297791 R pseudogene, MobA-related; complement(297714..297791) Escherichia coli str. K-12 substr. MG1655 7751634 NP_414817.1 CDS paoD NC_000913.3 297770 298726 R moco insertion factor for PaoABC aldehyde oxidoreductase complement(297770..298726) Escherichia coli str. K-12 substr. MG1655 945010 NP_414818.1 CDS paoC NC_000913.3 298736 300934 R PaoABC aldehyde oxidoreductase, Moco-containing subunit complement(298736..300934) Escherichia coli str. K-12 substr. MG1655 944961 NP_414819.1 CDS paoB NC_000913.3 300931 301887 R PaoABC aldehyde oxidoreductase, FAD-containing subunit complement(300931..301887) Escherichia coli str. K-12 substr. MG1655 945710 NP_414820.1 CDS paoA NC_000913.3 301884 302573 R putative xanthine dehydrogenase; PaoABC aldehyde oxidoreductase, 2Fe-2S subunit complement(301884..302573) Escherichia coli str. K-12 substr. MG1655 945330 NP_414821.1 CDS yagU NC_000913.3 302991 303605 D DUF1440 family inner membrane protein 302991..303605 Escherichia coli str. K-12 substr. MG1655 945677 NP_414822.1 CDS ykgJ NC_000913.3 303853 304182 R putative ferredoxin; UPF0153 cysteine cluster protein complement(303853..304182) Escherichia coli str. K-12 substr. MG1655 945905 NP_414823.2 CDS ecpE NC_000913.3 304495 305205 R ECP production pilus chaperone complement(304495..305205) Escherichia coli str. K-12 substr. MG1655 946631 NP_414824.1 CDS ecpD NC_000913.3 305174 306817 R putative receptor; polymerized tip adhesin of ECP fibers complement(305174..306817) Escherichia coli str. K-12 substr. MG1655 947349 NP_414825.1 CDS ecpC NC_000913.3 306807 309332 R putative enzyme; ECP production outer membrane protein complement(306807..309332) Escherichia coli str. K-12 substr. MG1655 947606 NP_414826.1 CDS ecpB NC_000913.3 309358 310026 R ECP production pilus chaperone complement(309358..310026) Escherichia coli str. K-12 substr. MG1655 948806 NP_414827.1 CDS ecpA NC_000913.3 310084 310671 R ECP pilin complement(310084..310671) Escherichia coli str. K-12 substr. MG1655 948759 NP_414828.1 CDS ecpR NC_000913.3 310746 311336 R putative regulator; putative transcriptional regulator for the ecp operon complement(310746..311336) Escherichia coli str. K-12 substr. MG1655 944966 NP_414829.1 CDS ykgL NC_000913.3 312112 312339 D uncharacterized protein 312112..312339 Escherichia coli str. K-12 substr. MG1655 944962 YP_588437.1 CDS ykgO NC_000913.3 312374 312514 R RpmJ-like protein complement(312374..312514) Escherichia coli str. K-12 substr. MG1655 1450238 NP_414830.1 CDS ykgM NC_000913.3 312514 312777 R 50S ribosomal protein L31 type B; alternative L31 utilized during zinc limitation complement(312514..312777) Escherichia coli str. K-12 substr. MG1655 944960 YP_002791238.1 CDS ykgR NC_000913.3 313141 313242 R uncharacterized protein complement(313141..313242) Escherichia coli str. K-12 substr. MG1655 7751635 b4630 CDS ykgP NC_000913.3 313716 313805 R pseudogene, oxidoreductase family; complement(313716..313805) Escherichia coli str. K-12 substr. MG1655 5625556 b0297 CDS eaeH NC_000913.3 314357 315228 D pseudogene, attaching and effacing protein homology;factor; Not classified; 314357..315228 Escherichia coli str. K-12 substr. MG1655 944957 NP_414832.2 CDS insE1 NC_000913.3 315291 315590 D IS3 transposase A 315291..315590 Escherichia coli str. K-12 substr. MG1655 944952 NP_414833.1 CDS insF1 NC_000913.3 315587 316453 D IS3 transposase B 315587..316453 Escherichia coli str. K-12 substr. MG1655 944948 b0300 CDS ykgA NC_000913.3 316486 317169 R pseudogene, AraC family;putative regulator; Not classified; putative ARAC-type regulatory protein; complement(316486..317169) Escherichia coli str. K-12 substr. MG1655 944956 b4631 CDS ykgQ NC_000913.3 317439 317567 D pseudogene, putative dehydrogenase; 317439..317567 Escherichia coli str. K-12 substr. MG1655 5625557 NP_414835.2 CDS rclC NC_000913.3 317726 318319 R reactive chlorine species (RCS) stress resistance inner membrane protein complement(317726..318319) Escherichia coli str. K-12 substr. MG1655 944974 NP_414837.2 CDS rclB NC_000913.3 318331 318567 R the overlapping ORF b0302 on the opposite strand is no longer thought to be an actual gene, and has been deaccessioned; reactive chlorine species (RCS) stress resistance periplasmic protein complement(318331..318567) Escherichia coli str. K-12 substr. MG1655 945658 NP_414838.2 CDS rclA NC_000913.3 318676 320001 R putative oxidoreductase; reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family complement(318676..320001) Escherichia coli str. K-12 substr. MG1655 946092 NP_414839.1 CDS rclR NC_000913.3 320227 321081 D putative ARAC-type regulatory protein; reactive chlorine species (RCS)-specific activator of the rcl genes 320227..321081 Escherichia coli str. K-12 substr. MG1655 945616 NP_414840.1 CDS ykgE NC_000913.3 321608 322327 D putative dehydrogenase subunit; cysteine-rich LutA family protein; putative electron transport chain YkgEFG component 321608..322327 Escherichia coli str. K-12 substr. MG1655 948438 NP_414841.1 CDS ykgF NC_000913.3 322338 323765 D ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component 322338..323765 Escherichia coli str. K-12 substr. MG1655 944980 NP_414842.4 CDS ykgG NC_000913.3 323758 324453 D putative transporter; LutC family protein; putative electron transport chain YkgEFG component 323758..324453 Escherichia coli str. K-12 substr. MG1655 945906 NP_414844.1 CDS ykgH NC_000913.3 324696 325364 R putative inner membrane protein complement(324696..325364) Escherichia coli str. K-12 substr. MG1655 947513 NP_414845.1 CDS betA NC_000913.3 325577 327247 R choline dehydrogenase, a flavoprotein complement(325577..327247) Escherichia coli str. K-12 substr. MG1655 945716 NP_414846.1 CDS betB NC_000913.3 327261 328733 R NAD+-dependent betaine aldehyde dehydrogenase; betaine aldehyde dehydrogenase, NAD-dependent complement(327261..328733) Escherichia coli str. K-12 substr. MG1655 947376 NP_414847.3 CDS betI NC_000913.3 328747 329334 R probably transcriptional repressor of bet genes; choline-inducible betIBA-betT divergent operon transcriptional repressor complement(328747..329334) Escherichia coli str. K-12 substr. MG1655 944981 NP_414848.1 CDS betT NC_000913.3 329463 331496 D high-affinity choline transport; choline transporter of high affinity 329463..331496 Escherichia coli str. K-12 substr. MG1655 945079 NP_414849.1 CDS yahA NC_000913.3 332371 333459 D c-di-GMP-specific phosphodiesterase 332371..333459 Escherichia coli str. K-12 substr. MG1655 947459 NP_414850.1 CDS yahB NC_000913.3 333501 334433 R putative transcriptional regulator LYSR-type; putative DNA-bindng transcriptional regulator complement(333501..334433) Escherichia coli str. K-12 substr. MG1655 945278 NP_414851.1 CDS yahC NC_000913.3 334525 335022 R putative inner membrane protein complement(334525..335022) Escherichia coli str. K-12 substr. MG1655 947337 NP_414852.1 CDS yahD NC_000913.3 335280 335885 D putative transcription factor; ankyrin repeat protein 335280..335885 Escherichia coli str. K-12 substr. MG1655 947681 NP_414853.1 CDS yahE NC_000913.3 335925 336788 D DUF2877 family protein 335925..336788 Escherichia coli str. K-12 substr. MG1655 947134 NP_414854.1 CDS yahF NC_000913.3 336778 338325 D putative oxidoreductase subunit; putative NAD(P)-binding succinyl-CoA synthase 336778..338325 Escherichia coli str. K-12 substr. MG1655 947298 NP_414855.1 CDS yahG NC_000913.3 338325 339743 D DUF1116 family protein 338325..339743 Escherichia coli str. K-12 substr. MG1655 945379 NP_414857.1 CDS yahI NC_000913.3 340165 341115 D putative kinase; carbamate kinase-like protein 340165..341115 Escherichia coli str. K-12 substr. MG1655 944984 NP_414858.1 CDS yahJ NC_000913.3 341125 342507 D putative deaminase; putative metallo-dependent hydrolase domain deaminase 341125..342507 Escherichia coli str. K-12 substr. MG1655 944976 NP_414859.1 CDS yahK NC_000913.3 342884 343933 D putative oxidoreductase; aldehyde reductase, NADPH-dependent, Zn-containing, broad specificity 342884..343933 Escherichia coli str. K-12 substr. MG1655 944975 NP_414860.1 CDS yahL NC_000913.3 344176 344991 D uncharacterized protein 344176..344991 Escherichia coli str. K-12 substr. MG1655 944970 NP_414861.2 CDS yahM NC_000913.3 345404 345649 D uncharacterized protein 345404..345649 Escherichia coli str. K-12 substr. MG1655 944969 NP_414862.1 CDS yahN NC_000913.3 345666 346337 R putative cytochrome subunit of dehydrogenase; amino acid exporter for proline, lysine, glutamate, homoserine complement(345666..346337) Escherichia coli str. K-12 substr. MG1655 944968 NP_414863.1 CDS yahO NC_000913.3 346484 346759 D periplasmic protein, function unknown, YhcN family 346484..346759 Escherichia coli str. K-12 substr. MG1655 944985 NP_414864.1 CDS prpR NC_000913.3 346857 348443 R regulator for prp operon; propionate catabolism operon regulatory protein complement(346857..348443) Escherichia coli str. K-12 substr. MG1655 944987 NP_414865.1 CDS prpB NC_000913.3 348682 349572 D putative phosphonomutase 2; 2-methylisocitrate lyase 348682..349572 Escherichia coli str. K-12 substr. MG1655 944990 NP_414867.1 CDS prpC NC_000913.3 350012 351181 D putative citrate synthase; propionate metabolism?; 2-methylcitrate synthase 350012..351181 Escherichia coli str. K-12 substr. MG1655 947528 NP_414868.1 CDS prpD NC_000913.3 351215 352666 D 2-methylcitrate dehydratase 351215..352666 Escherichia coli str. K-12 substr. MG1655 945931 NP_414869.1 CDS prpE NC_000913.3 352706 354592 D putative propionyl-CoA synthetase; propionate--CoA ligase 352706..354592 Escherichia coli str. K-12 substr. MG1655 946891 NP_414870.1 CDS codB NC_000913.3 354922 356181 D cytosine permease/transport; cytosine transporter 354922..356181 Escherichia coli str. K-12 substr. MG1655 944994 NP_414871.1 CDS codA NC_000913.3 356171 357454 D cytosine/isoguanine deaminase 356171..357454 Escherichia coli str. K-12 substr. MG1655 944996 NP_414872.3 CDS cynR NC_000913.3 357791 358690 R cyn operon positive regulator; transcriptional activator of cyn operon; autorepressor complement(357791..358690) Escherichia coli str. K-12 substr. MG1655 945001 NP_414873.1 CDS cynT NC_000913.3 358799 359458 D carbonic anhydrase 358799..359458 Escherichia coli str. K-12 substr. MG1655 946548 NP_414874.1 CDS cynS NC_000913.3 359489 359959 D cyanate aminohydrolase, cyanase; cyanate aminohydrolase 359489..359959 Escherichia coli str. K-12 substr. MG1655 948998 NP_414875.1 CDS cynX NC_000913.3 359992 361146 D cyanate transport; putative cyanate transporter 359992..361146 Escherichia coli str. K-12 substr. MG1655 946770 NP_414876.1 CDS lacA NC_000913.3 361249 361860 R thiogalactoside acetyltransferase complement(361249..361860) Escherichia coli str. K-12 substr. MG1655 945674 NP_414877.1 CDS lacY NC_000913.3 361926 363179 R galactoside permease (lactose permease, M protein) (MFS family); lactose permease complement(361926..363179) Escherichia coli str. K-12 substr. MG1655 949083 NP_414878.1 CDS lacZ NC_000913.3 363231 366305 R beta-D-galactosidase complement(363231..366305) Escherichia coli str. K-12 substr. MG1655 945006 NP_414879.3 CDS lacI NC_000913.3 366428 367510 R transcriptional repressor of the lac operon; lactose-inducible lac operon transcriptional repressor complement(366428..367510) Escherichia coli str. K-12 substr. MG1655 945007 NP_414880.2 CDS mhpR NC_000913.3 367587 368420 R transcriptional regulator for mhp operon; mhp operon transcriptional activator complement(367587..368420) Escherichia coli str. K-12 substr. MG1655 945938 NP_414881.1 CDS mhpA NC_000913.3 368611 370275 D 3-(3-hydroxyphenyl)propionate hydroxylase 368611..370275 Escherichia coli str. K-12 substr. MG1655 945197 NP_414882.1 CDS mhpB NC_000913.3 370277 371221 D 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 370277..371221 Escherichia coli str. K-12 substr. MG1655 945047 NP_414883.5 CDS mhpC NC_000913.3 371239 372105 D 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 371239..372105 Escherichia coli str. K-12 substr. MG1655 944954 NP_414884.2 CDS mhpD NC_000913.3 372115 372924 D 2-keto-4-pentenoate hydratase 372115..372924 Escherichia coli str. K-12 substr. MG1655 944768 NP_414885.1 CDS mhpF NC_000913.3 372921 373871 D acetaldehyde dehydrogenase; acetaldehyde-CoA dehydrogenase II, NAD-binding 372921..373871 Escherichia coli str. K-12 substr. MG1655 945008 NP_414886.1 CDS mhpE NC_000913.3 373868 374881 D 4-hydroxy-2-ketovalerate aldolase; 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I 373868..374881 Escherichia coli str. K-12 substr. MG1655 945012 NP_414887.2 CDS mhpT NC_000913.3 375459 376670 D putative transport protein; 3-hydroxyphenylpropionic transporter 375459..376670 Escherichia coli str. K-12 substr. MG1655 944997 NP_414888.4 CDS yaiL NC_000913.3 376772 377311 D DUF2058 family protein 376772..377311 Escherichia coli str. K-12 substr. MG1655 944993 NP_414889.1 CDS frmB NC_000913.3 377535 378368 R putative S-formylglutathione hydrolase; S-formylglutathione hydrolase complement(377535..378368) Escherichia coli str. K-12 substr. MG1655 944991 NP_414890.1 CDS frmA NC_000913.3 378462 379571 R alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase complement(378462..379571) Escherichia coli str. K-12 substr. MG1655 944988 NP_414891.4 CDS frmR NC_000913.3 379606 379881 R repressor of frmRAB; regulator protein that represses frmRAB operon complement(379606..379881) Escherichia coli str. K-12 substr. MG1655 944986 NP_414892.1 CDS yaiO NC_000913.3 380069 380842 R outer membrane protein complement(380069..380842) Escherichia coli str. K-12 substr. MG1655 945014 b4579 CDS yaiX NC_000913.3 380844 382872 R pseudogene, interrupted by IS2A, acetyltransferase homolog; nonfunctional; interruped by IS2; putative transferase; complement(join(380844..381259,382591..382872)) Escherichia coli str. K-12 substr. MG1655 4056039 NP_414894.2 CDS insC1 NC_000913.3 381351 381716 D IS2 repressor TnpA 381351..381716 Escherichia coli str. K-12 substr. MG1655 945025 NP_414895.1 CDS insD1 NC_000913.3 381674 382579 D IS2 transposase TnpB 381674..382579 Escherichia coli str. K-12 substr. MG1655 945203 NP_414897.1 CDS yaiP NC_000913.3 382739 383935 R polysaccharide metabolism; putative family 2 glycosyltransferase complement(382739..383935) Escherichia coli str. K-12 substr. MG1655 945308 NP_414898.4 CDS yaiS NC_000913.3 384059 384616 R putative PIG-L family deacetylase complement(384059..384616) Escherichia coli str. K-12 substr. MG1655 946967 NP_414899.2 CDS tauA NC_000913.3 385232 386194 D taurine transport system periplasmic protein; taurine transporter subunit 385232..386194 Escherichia coli str. K-12 substr. MG1655 945030 NP_414900.1 CDS tauB NC_000913.3 386207 386974 D taurine ATP-binding component of a transport system; taurine transporter subunit 386207..386974 Escherichia coli str. K-12 substr. MG1655 945027 NP_414901.1 CDS tauC NC_000913.3 386971 387798 D taurine transport system permease protein; taurine transporter subunit 386971..387798 Escherichia coli str. K-12 substr. MG1655 945026 NP_414902.1 CDS tauD NC_000913.3 387795 388646 D taurine dioxygenase, 2-oxoglutarate-dependent 387795..388646 Escherichia coli str. K-12 substr. MG1655 945021 NP_414903.4 CDS hemB NC_000913.3 388753 389727 R 5-aminolevulinate dehydratase = porphobilinogen synthase; 5-aminolevulinate dehydratase (porphobilinogen synthase) complement(388753..389727) Escherichia coli str. K-12 substr. MG1655 945017 b4580 CDS yaiT NC_000913.3 390251 394418 D pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein; join(390251..391708,392970..394418) Escherichia coli str. K-12 substr. MG1655 4056040 NP_414906.1 CDS insF1 NC_000913.3 391739 392605 R IS3 transposase B complement(391739..392605) Escherichia coli str. K-12 substr. MG1655 945036 NP_414907.2 CDS insE1 NC_000913.3 392602 392901 R IS3 transposase A complement(392602..392901) Escherichia coli str. K-12 substr. MG1655 946900 NP_414909.2 CDS yaiV NC_000913.3 394506 395129 D putative transcriptional regulator 394506..395129 Escherichia coli str. K-12 substr. MG1655 946902 NP_414910.1 CDS ampH NC_000913.3 395130 396287 R D-alanyl-D-alanine- carboxypeptidase/endopeptidase; penicillin-binding protein; weak beta-lactamase complement(395130..396287) Escherichia coli str. K-12 substr. MG1655 946904 NP_414911.1 CDS sbmA NC_000913.3 396639 397859 D sensitivity to microcin B17, possibly envelop protein; microcin B17 transporter 396639..397859 Escherichia coli str. K-12 substr. MG1655 946884 NP_414912.1 CDS yaiW NC_000913.3 397872 398966 D putative lipoprotein 397872..398966 Escherichia coli str. K-12 substr. MG1655 945038 NP_414913.1 CDS yaiY NC_000913.3 399025 399333 R DUF2755 family inner membrane protein complement(399025..399333) Escherichia coli str. K-12 substr. MG1655 945223 NP_414914.2 CDS yaiZ NC_000913.3 399593 399805 D DUF2754 family putative inner membrane protein 399593..399805 Escherichia coli str. K-12 substr. MG1655 947355 NP_414915.1 CDS ddlA NC_000913.3 399829 400923 R D-alanine-D-alanine ligase A complement(399829..400923) Escherichia coli str. K-12 substr. MG1655 945313 NP_414916.1 CDS iraP NC_000913.3 401386 401646 D anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein 401386..401646 Escherichia coli str. K-12 substr. MG1655 947709 NP_414917.2 CDS phoA NC_000913.3 401747 403162 D alkaline phosphatase; start codon corrected; bacterial alkaline phosphatase 401747..403162 Escherichia coli str. K-12 substr. MG1655 945041 NP_414918.4 CDS psiF NC_000913.3 403281 403601 D induced by phosphate starvation; PsiF family protein 403281..403601 Escherichia coli str. K-12 substr. MG1655 945040 NP_414919.1 CDS yaiC NC_000913.3 403703 404818 D diguanylate cyclase, cellulose regualtor 403703..404818 Escherichia coli str. K-12 substr. MG1655 945037 NP_414920.1 CDS proC NC_000913.3 404835 405644 R pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase, NAD(P)-binding complement(404835..405644) Escherichia coli str. K-12 substr. MG1655 945034 NP_414921.2 CDS yaiI NC_000913.3 405764 406222 D UPF0178 family protein 405764..406222 Escherichia coli str. K-12 substr. MG1655 945033 NP_414922.1 CDS aroL NC_000913.3 406405 406929 D shikimate kinase II 406405..406929 Escherichia coli str. K-12 substr. MG1655 945031 NP_414923.1 CDS yaiA NC_000913.3 406979 407170 D OxyR-regulated conserved protein 406979..407170 Escherichia coli str. K-12 substr. MG1655 945043 NP_414924.1 CDS aroM NC_000913.3 407428 408105 D protein of aro operon, regulated by aroR; AroM family protein 407428..408105 Escherichia coli str. K-12 substr. MG1655 945045 NP_414925.1 CDS yaiE NC_000913.3 408177 408461 D UPF0345 family protein 408177..408461 Escherichia coli str. K-12 substr. MG1655 945048 b0392 CDS ykiA NC_000913.3 408609 408950 D pseudogene; 408609..408950 Escherichia coli str. K-12 substr. MG1655 945423 NP_414927.1 CDS rdgC NC_000913.3 409108 410019 R nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function complement(409108..410019) Escherichia coli str. K-12 substr. MG1655 948585 NP_414928.2 CDS mak NC_000913.3 410144 411052 D possible NAGC-like transcriptional regulator; manno(fructo)kinase 410144..411052 Escherichia coli str. K-12 substr. MG1655 949086 NP_414930.3 CDS araJ NC_000913.3 411297 412481 R involved in either transport or processing of arabinose polymers; arabinose-inducible putative transporter, MFS family complement(411297..412481) Escherichia coli str. K-12 substr. MG1655 949077 NP_414931.1 CDS sbcC NC_000913.3 412607 415753 R ATP-dependent dsDNA exonuclease; exonuclease, dsDNA, ATP-dependent complement(412607..415753) Escherichia coli str. K-12 substr. MG1655 949076 NP_414932.1 CDS sbcD NC_000913.3 415750 416952 R ATP-dependent dsDNA exonuclease; exonuclease, dsDNA, ATP-dependent complement(415750..416952) Escherichia coli str. K-12 substr. MG1655 945049 NP_414933.1 CDS phoB NC_000913.3 417142 417831 D positive response regulator for pho regulon, sensor is PhoR (or CreC); response regulator in two-component regulatory system with PhoR (or CreC) 417142..417831 Escherichia coli str. K-12 substr. MG1655 945046 NP_414934.1 CDS phoR NC_000913.3 417889 419184 D positive and negative sensor protein for pho regulon; sensory histidine kinase in two-component regulatory system with PhoB 417889..419184 Escherichia coli str. K-12 substr. MG1655 945044 NP_414935.1 CDS brnQ NC_000913.3 419591 420910 D branched chain amino acid transport system II carrier protein; branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val 419591..420910 Escherichia coli str. K-12 substr. MG1655 945042 NP_414936.1 CDS proY NC_000913.3 420986 422359 D proline permease transport protein; proline-specific permease 420986..422359 Escherichia coli str. K-12 substr. MG1655 945050 NP_414937.2 CDS malZ NC_000913.3 422518 424332 D maltodextrin glucosidase 422518..424332 Escherichia coli str. K-12 substr. MG1655 949131 NP_414938.1 CDS acpH NC_000913.3 424337 424918 R putative glycoprotein; acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase complement(424337..424918) Escherichia coli str. K-12 substr. MG1655 949132 NP_414939.1 CDS queA NC_000913.3 425011 426081 D synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 425011..426081 Escherichia coli str. K-12 substr. MG1655 944905 NP_414940.1 CDS tgt NC_000913.3 426137 427264 D tRNA-guanine transglycosylase 426137..427264 Escherichia coli str. K-12 substr. MG1655 949130 NP_414941.1 CDS yajC NC_000913.3 427287 427619 D SecYEG protein translocase auxillary subunit 427287..427619 Escherichia coli str. K-12 substr. MG1655 945374 NP_414942.1 CDS secD NC_000913.3 427647 429494 D protein secretion; membrane protein, part of the channel; SecYEG protein translocase auxillary subunit 427647..429494 Escherichia coli str. K-12 substr. MG1655 949133 NP_414943.1 CDS secF NC_000913.3 429505 430476 D protein secretion, membrane protein; SecYEG protein translocase auxillary subunit 429505..430476 Escherichia coli str. K-12 substr. MG1655 949120 NP_414944.1 CDS yajD NC_000913.3 430605 430952 D HNH nuclease family protein 430605..430952 Escherichia coli str. K-12 substr. MG1655 945051 NP_414945.1 CDS tsx NC_000913.3 431129 432013 R nucleoside channel; receptor of phage T6 and colicin K; nucleoside channel, receptor of phage T6 and colicin K complement(431129..432013) Escherichia coli str. K-12 substr. MG1655 946242 NP_414946.4 CDS yajI NC_000913.3 432312 432851 R putative lipoprotein complement(432312..432851) Escherichia coli str. K-12 substr. MG1655 947233 NP_414947.1 CDS nrdR NC_000913.3 433002 433451 D Nrd regulon repressor 433002..433451 Escherichia coli str. K-12 substr. MG1655 947437 NP_414948.1 CDS ribD NC_000913.3 433455 434558 D fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase 433455..434558 Escherichia coli str. K-12 substr. MG1655 945620 NP_414949.1 CDS ribE NC_000913.3 434647 435117 D riboflavin synthase, beta chain; riboflavin synthase beta chain 434647..435117 Escherichia coli str. K-12 substr. MG1655 946453 NP_414950.1 CDS nusB NC_000913.3 435137 435556 D transcription termination; L factor; transcription antitermination protein 435137..435556 Escherichia coli str. K-12 substr. MG1655 945054 NP_414951.1 CDS thiL NC_000913.3 435634 436611 D thiamine monophosphate kinase 435634..436611 Escherichia coli str. K-12 substr. MG1655 947387 NP_414952.1 CDS pgpA NC_000913.3 436589 437107 D phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A 436589..437107 Escherichia coli str. K-12 substr. MG1655 947542 NP_414953.2 CDS yajO NC_000913.3 437161 438135 R putative NAD(P)H-dependent xylose reductase; 2-carboxybenzaldehyde reductase complement(437161..438135) Escherichia coli str. K-12 substr. MG1655 946903 NP_414954.1 CDS dxs NC_000913.3 438315 440177 R 1-deoxyxylulose-5-phosphate synthase; flavoprotein; 1-deoxyxylulose-5-phosphate synthase, thiamine triphosphate-binding, FAD-requiring complement(438315..440177) Escherichia coli str. K-12 substr. MG1655 945060 NP_414955.1 CDS ispA NC_000913.3 440202 441101 R geranyltranstransferase complement(440202..441101) Escherichia coli str. K-12 substr. MG1655 945064 NP_414956.1 CDS xseB NC_000913.3 441101 441343 R exonuclease VII, small subunit; exonuclease VII small subunit complement(441101..441343) Escherichia coli str. K-12 substr. MG1655 945069 NP_414957.1 CDS thiI NC_000913.3 441549 442997 D tRNA s(4)U8 sulfurtransferase 441549..442997 Escherichia coli str. K-12 substr. MG1655 945067 NP_414958.4 CDS yajL NC_000913.3 443051 443641 R oxidative-stress-resistance chaperone complement(443051..443641) Escherichia coli str. K-12 substr. MG1655 945066 NP_414959.1 CDS panE NC_000913.3 443604 444515 R 2-dehydropantoate 2-reductase; 2-dehydropantoate reductase, NADPH-specific complement(443604..444515) Escherichia coli str. K-12 substr. MG1655 945065 NP_414960.2 CDS yajQ NC_000913.3 444683 445174 D phage Phi6 host factor, ATP/GTP binding protein 444683..445174 Escherichia coli str. K-12 substr. MG1655 945063 NP_414961.4 CDS yajR NC_000913.3 445302 446666 R putative transport protein; putative transporter complement(445302..446666) Escherichia coli str. K-12 substr. MG1655 945058 NP_414962.1 CDS cyoE NC_000913.3 446815 447705 R protoheme IX farnesyltransferase (haeme O biosynthesis); protoheme IX farnesyltransferase complement(446815..447705) Escherichia coli str. K-12 substr. MG1655 945073 NP_414963.1 CDS cyoD NC_000913.3 447717 448046 R cytochrome o ubiquinol oxidase subunit IV complement(447717..448046) Escherichia coli str. K-12 substr. MG1655 944918 NP_414964.1 CDS cyoC NC_000913.3 448046 448660 R cytochrome o ubiquinol oxidase subunit III complement(448046..448660) Escherichia coli str. K-12 substr. MG1655 946897 NP_414965.1 CDS cyoB NC_000913.3 448650 450641 R cytochrome o ubiquinol oxidase subunit I complement(448650..450641) Escherichia coli str. K-12 substr. MG1655 945615 NP_414966.1 CDS cyoA NC_000913.3 450663 451610 R cytochrome o ubiquinol oxidase subunit II complement(450663..451610) Escherichia coli str. K-12 substr. MG1655 945080 NP_414967.1 CDS ampG NC_000913.3 452070 453545 R regulates beta-lactamase synthesis; muropeptide transporter complement(452070..453545) Escherichia coli str. K-12 substr. MG1655 946438 NP_414968.4 CDS yajG NC_000913.3 453589 454167 R putative polymerase/proteinase; putative lipoprotein complement(453589..454167) Escherichia coli str. K-12 substr. MG1655 945521 NP_414969.4 CDS bolA NC_000913.3 454472 454789 D possible regulator of murein genes; stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC 454472..454789 Escherichia coli str. K-12 substr. MG1655 947043 NP_414970.1 CDS tig NC_000913.3 455133 456431 D trigger factor; a molecular chaperone involved in cell division; peptidyl-prolyl cis/trans isomerase (trigger factor) 455133..456431 Escherichia coli str. K-12 substr. MG1655 945081 NP_414971.1 CDS clpP NC_000913.3 456677 457300 D ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5; proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases 456677..457300 Escherichia coli str. K-12 substr. MG1655 945082 NP_414972.1 CDS clpX NC_000913.3 457426 458700 D ATP-dependent specificity component of clpP serine protease, chaperone; ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease 457426..458700 Escherichia coli str. K-12 substr. MG1655 945083 NP_414973.1 CDS lon NC_000913.3 458888 461242 D DNA-binding, ATP-dependent protease La; heat shock K-protein; DNA-binding ATP-dependent protease La 458888..461242 Escherichia coli str. K-12 substr. MG1655 945085 NP_414974.1 CDS hupB NC_000913.3 461451 461723 D DNA-binding protein HU-beta, NS1 (HU-1); HU, DNA-binding transcriptional regulator, beta subunit 461451..461723 Escherichia coli str. K-12 substr. MG1655 949095 NP_414975.1 CDS ppiD NC_000913.3 461915 463786 D periplasmic folding chaperone, has an inactive PPIase domain 461915..463786 Escherichia coli str. K-12 substr. MG1655 946056 NP_414976.1 CDS ybaV NC_000913.3 463937 464308 D putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein 463937..464308 Escherichia coli str. K-12 substr. MG1655 945884 NP_414977.1 CDS fadM NC_000913.3 464402 464800 D long-chain acyl-CoA thioesterase III 464402..464800 Escherichia coli str. K-12 substr. MG1655 945812 NP_414978.1 CDS queC NC_000913.3 464852 465547 R 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis complement(464852..465547) Escherichia coli str. K-12 substr. MG1655 947034 NP_414979.1 CDS ybaE NC_000913.3 465612 467312 R putative ABC superfamily transporter periplasmic-binding protein complement(465612..467312) Escherichia coli str. K-12 substr. MG1655 949093 NP_414980.2 CDS cof NC_000913.3 467412 468230 D thiamine pyrimidine pyrophosphate hydrolase; HMP-PP phosphatase 467412..468230 Escherichia coli str. K-12 substr. MG1655 945089 NP_414981.4 CDS ybaO NC_000913.3 468383 468841 D putative LRP-like transcriptional regulator; putative DNA-binding transcriptional regulator 468383..468841 Escherichia coli str. K-12 substr. MG1655 945091 NP_414982.1 CDS mdlA NC_000913.3 468871 470643 D putative multidrug transporter subunit of ABC superfamily, ATP-binding component 468871..470643 Escherichia coli str. K-12 substr. MG1655 945092 NP_414983.1 CDS mdlB NC_000913.3 470636 472417 D putative multidrug transporter subunit of ABC superfamily, ATP-binding component 470636..472417 Escherichia coli str. K-12 substr. MG1655 945088 NP_414984.1 CDS glnK NC_000913.3 472598 472936 D nitrogen regulatory protein P-II 2; nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB 472598..472936 Escherichia coli str. K-12 substr. MG1655 945087 NP_414985.1 CDS amtB NC_000913.3 472966 474252 D probable ammonium transporter; ammonium transporter 472966..474252 Escherichia coli str. K-12 substr. MG1655 945084 NP_414986.1 CDS tesB NC_000913.3 474301 475161 R acyl-CoA thioesterase 2 complement(474301..475161) Escherichia coli str. K-12 substr. MG1655 945074 NP_414987.3 CDS ybaY NC_000913.3 475379 475951 D glycoprotein/polysaccharide metabolism; outer membrane lipoprotein 475379..475951 Escherichia coli str. K-12 substr. MG1655 945070 NP_414988.1 CDS ybaZ NC_000913.3 475982 476371 R excision repair protein, alkyltransferase-like protein ATL complement(475982..476371) Escherichia coli str. K-12 substr. MG1655 945094 NP_414989.1 CDS ybaA NC_000913.3 476672 477025 D DUF1428 family protein 476672..477025 Escherichia coli str. K-12 substr. MG1655 948863 NP_414990.2 CDS ylaB NC_000913.3 477067 478617 R putative membrane-anchored cyclic-di-GMP phosphodiesterase complement(477067..478617) Escherichia coli str. K-12 substr. MG1655 948951 NP_414991.4 CDS ylaC NC_000913.3 478781 479251 R DUF1449 family inner membrane protein complement(478781..479251) Escherichia coli str. K-12 substr. MG1655 948876 NP_414992.1 CDS maa NC_000913.3 479367 479918 R maltose O-acetyltransferase complement(479367..479918) Escherichia coli str. K-12 substr. MG1655 945096 NP_414993.1 CDS hha NC_000913.3 480090 480308 R haemolysin expression modulating protein; modulator of gene expression, with H-NS complement(480090..480308) Escherichia coli str. K-12 substr. MG1655 945098 NP_414994.1 CDS tomB NC_000913.3 480334 480708 R Hha toxicity attenuator; conjugation-related protein complement(480334..480708) Escherichia coli str. K-12 substr. MG1655 945106 NP_414995.1 CDS acrB NC_000913.3 481254 484403 R acridine efflux pump; multidrug efflux system protein complement(481254..484403) Escherichia coli str. K-12 substr. MG1655 945108 NP_414996.1 CDS acrA NC_000913.3 484426 485619 R acridine efflux pump; multidrug efflux system complement(484426..485619) Escherichia coli str. K-12 substr. MG1655 945112 NP_414997.1 CDS acrR NC_000913.3 485761 486408 D acrAB operon repressor; transcriptional repressor 485761..486408 Escherichia coli str. K-12 substr. MG1655 945516 NP_414998.1 CDS mscK NC_000913.3 486536 489898 D mechanosensitive channel protein; mechanosensitive channel protein, intermediate conductance, K+ regulated 486536..489898 Escherichia coli str. K-12 substr. MG1655 945132 NP_414999.1 CDS ybaM NC_000913.3 490110 490271 R DUF2496 family protein complement(490110..490271) Escherichia coli str. K-12 substr. MG1655 945144 NP_415000.1 CDS priC NC_000913.3 490285 490812 R primosomal replication protein N'' complement(490285..490812) Escherichia coli str. K-12 substr. MG1655 945071 NP_415001.1 CDS ybaN NC_000913.3 490882 491259 D putative gene 58; DUF454 family inner membrane protein 490882..491259 Escherichia coli str. K-12 substr. MG1655 945558 NP_415002.1 CDS apt NC_000913.3 491412 491963 D adenine phosphoribosyltransferase 491412..491963 Escherichia coli str. K-12 substr. MG1655 945113 NP_415003.1 CDS dnaX NC_000913.3 492092 494023 D DNA polymerase III, tau and gamma subunits; DNA elongation factor III; DNA polymerase III/DNA elongation factor III, tau and gamma subunits 492092..494023 Escherichia coli str. K-12 substr. MG1655 945105 NP_415004.1 CDS ybaB NC_000913.3 494076 494405 D DNA-binding protein, putative nucleoid-associated protein 494076..494405 Escherichia coli str. K-12 substr. MG1655 945104 NP_415005.1 CDS recR NC_000913.3 494405 495010 D recombination and repair; gap repair protein 494405..495010 Escherichia coli str. K-12 substr. MG1655 945100 NP_415006.1 CDS htpG NC_000913.3 495120 496994 D chaperone Hsp90, heat shock protein C 62.5; protein refolding molecular co-chaperone Hsp90, Hsp70-dependent; heat-shock protein; ATPase 495120..496994 Escherichia coli str. K-12 substr. MG1655 945099 NP_415007.1 CDS adk NC_000913.3 497175 497819 D adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity; adenylate kinase 497175..497819 Escherichia coli str. K-12 substr. MG1655 945097 NP_415008.1 CDS hemH NC_000913.3 498055 499017 D ferrochelatase: final enzyme of heme biosynthesis; ferrochelatase 498055..499017 Escherichia coli str. K-12 substr. MG1655 947532 NP_415009.1 CDS aes NC_000913.3 499014 499973 R acetyl esterase complement(499014..499973) Escherichia coli str. K-12 substr. MG1655 947514 NP_415010.1 CDS gsk NC_000913.3 500125 501429 D inosine-guanosine kinase; inosine/guanosine kinase 500125..501429 Escherichia coli str. K-12 substr. MG1655 946584 NP_415011.1 CDS ybaL NC_000913.3 501562 503238 R putative transport protein; inner membrane putative NAD(P)-binding transporter complement(501562..503238) Escherichia coli str. K-12 substr. MG1655 946576 NP_415012.1 CDS fsr NC_000913.3 503476 504696 R fosmidomycin resistance protein; putative fosmidomycin efflux system protein complement(503476..504696) Escherichia coli str. K-12 substr. MG1655 945119 NP_415013.1 CDS ushA NC_000913.3 504914 506566 D UDP-sugar hydrolase (5'-nucleotidase); bifunctional UDP-sugar hydrolase/5'-nucleotidase 504914..506566 Escherichia coli str. K-12 substr. MG1655 947331 NP_415014.1 CDS ybaK NC_000913.3 506603 507082 R Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase complement(506603..507082) Escherichia coli str. K-12 substr. MG1655 947083 NP_415015.1 CDS ybaP NC_000913.3 507286 508080 R putative ligase; TraB family protein complement(507286..508080) Escherichia coli str. K-12 substr. MG1655 945124 NP_415016.4 CDS ybaQ NC_000913.3 508218 508559 D putative DNA-binding transcriptional regulator 508218..508559 Escherichia coli str. K-12 substr. MG1655 948800 NP_415017.1 CDS copA NC_000913.3 508875 511379 R copper transporter complement(508875..511379) Escherichia coli str. K-12 substr. MG1655 946106 NP_415018.1 CDS glsA NC_000913.3 511641 512573 D putative glutaminase; glutaminase 1 511641..512573 Escherichia coli str. K-12 substr. MG1655 946187 NP_415019.1 CDS ybaT NC_000913.3 512576 513868 D putative amino acid/amine transport protein; putative amino acid transporter 512576..513868 Escherichia coli str. K-12 substr. MG1655 945363 NP_415020.1 CDS cueR NC_000913.3 513993 514400 D copper-responsive regulon transcriptional regulator 513993..514400 Escherichia coli str. K-12 substr. MG1655 945332 NP_415021.2 CDS ybbJ NC_000913.3 514401 514859 R inner membrane protein that stimulates the ftsH htpX mutant suppressor activity of QmcA complement(514401..514859) Escherichia coli str. K-12 substr. MG1655 945126 NP_415022.1 CDS qmcA NC_000913.3 514856 515773 R putative protease; PHB domain membrane-anchored putative protease complement(514856..515773) Escherichia coli str. K-12 substr. MG1655 947257 NP_415023.1 CDS fetA NC_000913.3 515919 516596 D putative ATP-binding component of a transport system; iron exporter, ATP-binding subunit, ABC transporter FetAB subunit; peroxide resistance protein 515919..516596 Escherichia coli str. K-12 substr. MG1655 946990 NP_415024.4 CDS fetB NC_000913.3 516583 517362 D putative metal resistance protein; iron exporter permease subunit, ABC transporter FetAB; peroxide resistance protein 516583..517362 Escherichia coli str. K-12 substr. MG1655 945137 NP_415025.4 CDS ybbN NC_000913.3 517425 518279 R putative thioredoxin-like protein; DnaK co-chaperone, thioredoxin-like protein complement(517425..518279) Escherichia coli str. K-12 substr. MG1655 947119 NP_415026.1 CDS ybbO NC_000913.3 518340 519149 R putative oxidoreductase complement(518340..519149) Escherichia coli str. K-12 substr. MG1655 945337 NP_415027.1 CDS tesA NC_000913.3 519139 519765 R acyl-CoA thioesterase I; also functions as protease I; multifunctional acyl-CoA thioesterase 1; protease I; lysophospholipase L1 complement(519139..519765) Escherichia coli str. K-12 substr. MG1655 945127 NP_415028.1 CDS ybbA NC_000913.3 519733 520419 D putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit 519733..520419 Escherichia coli str. K-12 substr. MG1655 945122 NP_415029.1 CDS ybbP NC_000913.3 520416 522830 D putative oxidoreductase; putative ABC transporter permease 520416..522830 Escherichia coli str. K-12 substr. MG1655 945118 NP_415030.1 CDS rhsD NC_000913.3 523261 527541 D rhsD protein in rhs element; Rhs family putative polymorphic toxin 523261..527541 Escherichia coli str. K-12 substr. MG1655 945116 NP_415031.1 CDS ybbC NC_000913.3 527581 527949 D putative immunity protein 527581..527949 Escherichia coli str. K-12 substr. MG1655 945115 b0499 CDS rhsH NC_000913.3 527952 528659 D pseudogene, Rhs familly protein; 527952..528659 Escherichia coli str. K-12 substr. MG1655 945114 b0501 CDS ybbD NC_000913.3 528640 529130 D pseudogene; 528640..529130 Escherichia coli str. K-12 substr. MG1655 945133 b4632 CDS ylbI NC_000913.3 529500 529592 D pseudogene, Rhs family protein; 529500..529592 Escherichia coli str. K-12 substr. MG1655 5625558 b0502 CDS ylbG NC_000913.3 529595 530016 R pseudogene, DNA-binding transcriptional regulator homology; complement(join(529595..529660,529660..530016)) Escherichia coli str. K-12 substr. MG1655 946803 NP_415036.1 CDS mnmH NC_000913.3 530132 531226 R putative capsule anchoring protein; tRNA 2-selenouridine synthase, selenophosphate-dependent complement(530132..531226) Escherichia coli str. K-12 substr. MG1655 947063 NP_415037.1 CDS allS NC_000913.3 531295 532221 R putative transcriptional regulator LYSR-type; allD operon transcriptional activator complement(531295..532221) Escherichia coli str. K-12 substr. MG1655 945139 NP_415038.1 CDS allA NC_000913.3 532451 532933 D ureidoglycolate lyase, releasing urea 532451..532933 Escherichia coli str. K-12 substr. MG1655 945141 NP_415039.1 CDS allR NC_000913.3 533011 533826 D transcriptional repressor of all and gcl operons; glyoxylate-induced 533011..533826 Escherichia coli str. K-12 substr. MG1655 945333 NP_415040.1 CDS gcl NC_000913.3 533916 535697 D glyoxylate carboligase 533916..535697 Escherichia coli str. K-12 substr. MG1655 945394 NP_415041.1 CDS hyi NC_000913.3 535710 536486 D hydroxypyruvate isomerase 535710..536486 Escherichia coli str. K-12 substr. MG1655 946186 NP_415042.1 CDS glxR NC_000913.3 536586 537464 D tartronate semialdehyde reductase, NADH-dependent 536586..537464 Escherichia coli str. K-12 substr. MG1655 945146 NP_415044.4 CDS ybbW NC_000913.3 537633 539087 D putative allantoin transporter 537633..539087 Escherichia coli str. K-12 substr. MG1655 945138 NP_415045.1 CDS allB NC_000913.3 539147 540508 D allantoinase 539147..540508 Escherichia coli str. K-12 substr. MG1655 945134 NP_415046.4 CDS ybbY NC_000913.3 540565 541866 D putative uracil/xanthine transporter 540565..541866 Escherichia coli str. K-12 substr. MG1655 945131 NP_415047.1 CDS glxK NC_000913.3 541888 543033 D glycerate kinase II 541888..543033 Escherichia coli str. K-12 substr. MG1655 945129 NP_415048.1 CDS allE NC_000913.3 543261 544046 R S-ureidoglycine aminohydrolase complement(543261..544046) Escherichia coli str. K-12 substr. MG1655 945149 NP_415049.1 CDS allC NC_000913.3 544057 545292 R allantoate amidohydrolase complement(544057..545292) Escherichia coli str. K-12 substr. MG1655 945150 NP_415050.1 CDS allD NC_000913.3 545314 546363 R ureidoglycolate dehydrogenase complement(545314..546363) Escherichia coli str. K-12 substr. MG1655 948342 NP_415051.1 CDS fdrA NC_000913.3 546680 548347 D involved in protein transport; multicopy suppressor of dominant negative ftsH mutants; putative NAD(P)-binding acyl-CoA synthetase 546680..548347 Escherichia coli str. K-12 substr. MG1655 946298 YP_009029994.1 CDS ylbE NC_000913.3 548357 549616 D NO-induced DUF1116 protein 548357..549616 Escherichia coli str. K-12 substr. MG1655 4056025 NP_415053.1 CDS ylbF NC_000913.3 549627 550442 D putative carboxylase; putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein 549627..550442 Escherichia coli str. K-12 substr. MG1655 945195 NP_415054.1 CDS ybcF NC_000913.3 550439 551332 D putative carbamate kinase; putative carbonate kinase 550439..551332 Escherichia coli str. K-12 substr. MG1655 944972 NP_415055.1 CDS purK NC_000913.3 551527 552594 R phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit; N5-carboxyaminoimidazole ribonucleotide synthase complement(551527..552594) Escherichia coli str. K-12 substr. MG1655 945153 NP_415056.1 CDS purE NC_000913.3 552591 553100 R phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit; N5-carboxyaminoimidazole ribonucleotide mutase complement(552591..553100) Escherichia coli str. K-12 substr. MG1655 949031 NP_415057.1 CDS lpxH NC_000913.3 553218 553940 R UDP-2,3-diacylglucosamine pyrophosphohydrolase complement(553218..553940) Escherichia coli str. K-12 substr. MG1655 949053 NP_415058.1 CDS ppiB NC_000913.3 553943 554437 R peptidyl-prolyl cis-trans isomerase B (rotamase B) complement(553943..554437) Escherichia coli str. K-12 substr. MG1655 949038 NP_415059.1 CDS cysS NC_000913.3 554611 555996 D cysteine tRNA synthetase; cysteinyl-tRNA synthetase 554611..555996 Escherichia coli str. K-12 substr. MG1655 946969 NP_415060.1 CDS ybcI NC_000913.3 556032 556553 R DUF457 family inner membrane protein complement(556032..556553) Escherichia coli str. K-12 substr. MG1655 945155 NP_415061.2 CDS ybcJ NC_000913.3 556661 556873 R ribosome-associated protein; putative RNA-binding protein complement(556661..556873) Escherichia coli str. K-12 substr. MG1655 945158 NP_415062.1 CDS folD NC_000913.3 556875 557741 R 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(556875..557741) Escherichia coli str. K-12 substr. MG1655 945221 NP_415063.4 CDS sfmA NC_000913.3 558212 558754 D putative fimbrial-like protein; FimA homolog, function unknown 558212..558754 Escherichia coli str. K-12 substr. MG1655 945522 NP_415064.1 CDS sfmC NC_000913.3 558974 559666 D putative chaperone; putative periplasmic pilus chaperone 558974..559666 Escherichia coli str. K-12 substr. MG1655 945367 NP_415065.1 CDS sfmD NC_000913.3 559697 562300 D putative outer membrane protein, export function; putative outer membrane export usher protein 559697..562300 Escherichia coli str. K-12 substr. MG1655 945160 NP_415066.2 CDS sfmH NC_000913.3 562336 563319 D involved in fimbrial asembly; FimA homolog, function unknown 562336..563319 Escherichia coli str. K-12 substr. MG1655 945407 NP_415067.1 CDS sfmF NC_000913.3 563330 563845 D putative fimbrial-like protein; FimA homolog, function unknown 563330..563845 Escherichia coli str. K-12 substr. MG1655 944977 NP_415068.1 CDS sfmZ NC_000913.3 563848 564480 R fimbrial Z protein; probable signal transducer; response regulator family protein complement(563848..564480) Escherichia coli str. K-12 substr. MG1655 947079 NP_415069.1 CDS intD NC_000913.3 564815 565978 R prophage DLP12 integrase; DLP12 prophage; putative phage integrase complement(564815..565978) Escherichia coli str. K-12 substr. MG1655 947162 b4633 CDS xisD NC_000913.3 565858 566079 R pseudogene, exisionase in defective prophage DLP12;Phage or Prophage Related; complement(565858..566079) Escherichia coli str. K-12 substr. MG1655 5625559 b0539 CDS exoD NC_000913.3 566098 566376 R pseudogene, DLP12 prophage; phage-type exonuclease family;Phage or Prophage Related; complement(566098..566376) Escherichia coli str. K-12 substr. MG1655 947902 b4508 CDS peaD NC_000913.3 566376 566687 D pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related; 566376..566687 Escherichia coli str. K-12 substr. MG1655 945299 b0542 CDS renD NC_000913.3 566684 568247 D pseudogene, DLP12 prophage;Phage or Prophage Related; join(566684..566776,568035..568247) Escherichia coli str. K-12 substr. MG1655 945024 NP_415072.2 CDS insE1 NC_000913.3 566842 567141 D IS3 transposase A 566842..567141 Escherichia coli str. K-12 substr. MG1655 945759 NP_415073.1 CDS insF1 NC_000913.3 567138 568004 D IS3 transposase B 567138..568004 Escherichia coli str. K-12 substr. MG1655 947988 NP_415075.1 CDS emrE NC_000913.3 568315 568647 D methylviologen resistance; DLP12 prophage; multidrug resistance protein 568315..568647 Escherichia coli str. K-12 substr. MG1655 948442 NP_415076.1 CDS ybcK NC_000913.3 568902 570428 D DLP12 prophage; putative recombinase 568902..570428 Escherichia coli str. K-12 substr. MG1655 945166 NP_415077.1 CDS ybcL NC_000913.3 570893 571444 D inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; secreted protein, UPF0098 family 570893..571444 Escherichia coli str. K-12 substr. MG1655 945165 NP_415078.1 CDS ybcM NC_000913.3 571454 572251 D putative ARAC-type regulatory protein; DLP12 prophage; putative DNA-binding transcriptional regulator 571454..572251 Escherichia coli str. K-12 substr. MG1655 945163 YP_001165308.1 CDS ylcH NC_000913.3 572368 572469 D uncharacterized protein, DLP12 prophage 572368..572469 Escherichia coli str. K-12 substr. MG1655 5061504 NP_415079.1 CDS ybcN NC_000913.3 572466 572921 D DLP12 prophage; uncharacterized protein 572466..572921 Escherichia coli str. K-12 substr. MG1655 945162 NP_415080.1 CDS ninE NC_000913.3 572921 573091 D similar to phage 82 and lambda proteins; DLP12 prophage; conserved protein 572921..573091 Escherichia coli str. K-12 substr. MG1655 945151 NP_415081.1 CDS ybcO NC_000913.3 573084 573374 D DLP12 prophage; uncharacterized protein 573084..573374 Escherichia coli str. K-12 substr. MG1655 945147 NP_415082.1 CDS rusA NC_000913.3 573371 573733 D endodeoxyribonuclease RUS (Holliday junction resolvase); DLP12 prophage; endonuclease RUS 573371..573733 Escherichia coli str. K-12 substr. MG1655 945174 YP_588439.1 CDS ylcG NC_000913.3 573730 573870 D uncharacterized protein, DLP12 prophage 573730..573870 Escherichia coli str. K-12 substr. MG1655 1450240 NP_415083.1 CDS quuD NC_000913.3 573956 574339 D DLP12 prophage; putative antitermination protein 573956..574339 Escherichia coli str. K-12 substr. MG1655 945177 b0553 CDS nmpC NC_000913.3 574529 576825 R DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage; complement(join(574529..574586,575786..576825)) Escherichia coli str. K-12 substr. MG1655 946786 NP_415084.1 CDS insH1 NC_000913.3 574737 575753 R IS5 transposase and trans-activator complement(574737..575753) Escherichia coli str. K-12 substr. MG1655 946163 NP_415086.1 CDS essD NC_000913.3 577398 577613 D DLP12 prophage; putative phage lysis protein 577398..577613 Escherichia coli str. K-12 substr. MG1655 947545 NP_415087.1 CDS rrrD NC_000913.3 577613 578110 D bacteriophage lambda lysozyme homolog; DLP12 prophage; putative lysozyme 577613..578110 Escherichia coli str. K-12 substr. MG1655 947539 NP_415088.1 CDS rzpD NC_000913.3 578107 578568 D bacteriophage lambda endopeptidase homolog; completely contained in another CDS; DLP12 prophage; putative murein endopeptidase 578107..578568 Escherichia coli str. K-12 substr. MG1655 945929 YP_588440.1 CDS rzoD NC_000913.3 578327 578509 D completely contained in another CDS; DLP12 prophage; putative lipoprotein 578327..578509 Escherichia coli str. K-12 substr. MG1655 1450242 NP_415089.1 CDS borD NC_000913.3 578600 578893 R bacteriophage lambda Bor protein homolog; DLP12 prophage; putative lipoprotein complement(578600..578893) Escherichia coli str. K-12 substr. MG1655 948980 NP_415090.2 CDS ybcV NC_000913.3 579184 579594 R putative an envelop protein; DLP12 prophage; uncharacterized protein complement(579184..579594) Escherichia coli str. K-12 substr. MG1655 945178 NP_415091.1 CDS ybcW NC_000913.3 579880 580086 D DLP12 prophage; uncharacterized protein 579880..580086 Escherichia coli str. K-12 substr. MG1655 945175 YP_001165309.1 CDS ylcI NC_000913.3 580251 580445 R DUF3950 family protein, DLP12 prophage complement(580251..580445) Escherichia coli str. K-12 substr. MG1655 5061499 NP_415092.1 CDS nohD NC_000913.3 580834 581379 D bacteriophage DNA packaging protein; DLP12 prophage; DNA packaging protein 580834..581379 Escherichia coli str. K-12 substr. MG1655 945172 b4634 CDS aaaD NC_000913.3 581354 581662 D pseudogene; DLP12 prophage; tail fiber assembly protein family;Phage or Prophage Related; 581354..581662 Escherichia coli str. K-12 substr. MG1655 5625560 b0561 CDS tfaD NC_000913.3 581660 582097 D pseudogene, DLP12 prophage; tail fiber assembly protein family;Phage or Prophage Related; 581660..582097 Escherichia coli str. K-12 substr. MG1655 945171 b0562 CDS ybcY NC_000913.3 582152 582806 R pseudogene, DLP12 prophage; methyltransferase homology;Phage or Prophage Related; complement(join(582152..582804,582803..582806)) Escherichia coli str. K-12 substr. MG1655 945170 b0563 CDS tfaX NC_000913.3 582953 583135 D pseudogene, DLP12 prophage;Phage or Prophage Related; 582953..583135 Escherichia coli str. K-12 substr. MG1655 945183 NP_415096.1 CDS appY NC_000913.3 583681 584430 D regulatory protein affecting appA and other genes; global transcriptional activator; DLP12 prophage 583681..584430 Escherichia coli str. K-12 substr. MG1655 948797 NP_415097.1 CDS ompT NC_000913.3 584680 585633 R outer membrane protein 3b (a), protease VII; DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) complement(584680..585633) Escherichia coli str. K-12 substr. MG1655 945185 NP_415098.1 CDS envY NC_000913.3 586147 586908 R envelope protein; thermoregulation of porin biosynthesis; porin thermoregulatory transcriptional activator complement(586147..586908) Escherichia coli str. K-12 substr. MG1655 949114 NP_415099.1 CDS ybcH NC_000913.3 587091 587981 R PRK09936 family protein complement(587091..587981) Escherichia coli str. K-12 substr. MG1655 945186 NP_415100.1 CDS nfrA NC_000913.3 587982 590954 R bacteriophage N4 receptor, outer membrane protein; bacteriophage N4 receptor, outer membrane subunit complement(587982..590954) Escherichia coli str. K-12 substr. MG1655 944741 NP_415101.1 CDS nfrB NC_000913.3 590941 593178 R bacteriophage N4 receptor, subunit, inner membrane protein; bacteriophage N4 receptor, inner membrane subunit complement(590941..593178) Escherichia coli str. K-12 substr. MG1655 945849 NP_415102.1 CDS cusS NC_000913.3 593328 594770 R sensory histidine kinase in two-component regulatory system with CusR, senses copper ions complement(593328..594770) Escherichia coli str. K-12 substr. MG1655 945978 NP_415103.1 CDS cusR NC_000913.3 594760 595443 R response regulator in two-component regulatory system with CusS complement(594760..595443) Escherichia coli str. K-12 substr. MG1655 945003 NP_415104.1 CDS cusC NC_000913.3 595600 596973 D copper/silver efflux system, outer membrane component 595600..596973 Escherichia coli str. K-12 substr. MG1655 946288 NP_415105.1 CDS cusF NC_000913.3 597131 597463 D periplasmic copper- and silver-binding protein 597131..597463 Escherichia coli str. K-12 substr. MG1655 945188 NP_415106.1 CDS cusB NC_000913.3 597479 598702 D copper/silver efflux system, membrane fusion protein 597479..598702 Escherichia coli str. K-12 substr. MG1655 945189 NP_415107.1 CDS cusA NC_000913.3 598714 601857 D copper/silver efflux system, membrane component 598714..601857 Escherichia coli str. K-12 substr. MG1655 945191 NP_415108.1 CDS pheP NC_000913.3 601959 603335 D phenylalanine-specific transport system; phenylalanine transporter 601959..603335 Escherichia coli str. K-12 substr. MG1655 945199 NP_415109.1 CDS ybdG NC_000913.3 603416 604663 R putative transport; mechanosensitive channel protein, miniconductance complement(603416..604663) Escherichia coli str. K-12 substr. MG1655 946243 NP_415110.1 CDS nfsB NC_000913.3 604771 605424 R oxygen-insensitive NAD(P)H nitroreductase; dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive complement(604771..605424) Escherichia coli str. K-12 substr. MG1655 945778 NP_415111.1 CDS ybdF NC_000913.3 605518 605886 R DUF419 family protein complement(605518..605886) Escherichia coli str. K-12 substr. MG1655 948302 NP_415112.1 CDS ybdJ NC_000913.3 605951 606199 R DUF1158 family putative inner membrane protein complement(605951..606199) Escherichia coli str. K-12 substr. MG1655 947183 NP_415113.1 CDS ybdK NC_000913.3 606265 607383 R weak gamma-glutamyl:cysteine ligase complement(606265..607383) Escherichia coli str. K-12 substr. MG1655 947246 YP_025295.1 CDS hokE NC_000913.3 607836 607988 D small toxic membrane polypeptide; the corresponding mokE lacks a start codon, and the regulatory RNA sokE has not been identified; toxic polypeptide, small 607836..607988 Escherichia coli str. K-12 substr. MG1655 2847715 NP_415114.1 CDS insL1 NC_000913.3 608065 609177 D IS186 transposase 608065..609177 Escherichia coli str. K-12 substr. MG1655 945200 NP_415115.2 CDS entD NC_000913.3 609459 610079 R enterochelin synthetase, component D; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex complement(609459..610079) Escherichia coli str. K-12 substr. MG1655 945194 NP_415116.1 CDS fepA NC_000913.3 610254 612494 R outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D; iron-enterobactin outer membrane transporter complement(610254..612494) Escherichia coli str. K-12 substr. MG1655 945193 NP_415117.2 CDS fes NC_000913.3 612737 613939 D enterochelin esterase; enterobactin/ferric enterobactin esterase 612737..613939 Escherichia coli str. K-12 substr. MG1655 945181 YP_588441.1 CDS ybdZ NC_000913.3 613942 614160 D stimulator of EntF adenylation activity, MbtH-like 613942..614160 Escherichia coli str. K-12 substr. MG1655 1450243 NP_415118.1 CDS entF NC_000913.3 614157 618038 D ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F); enterobactin synthase multienzyme complex component, ATP-dependent 614157..618038 Escherichia coli str. K-12 substr. MG1655 945184 NP_415119.1 CDS fepE NC_000913.3 618254 619387 D ferric enterobactin (enterochelin) transport; regulator of length of O-antigen component of lipopolysaccharide chains 618254..619387 Escherichia coli str. K-12 substr. MG1655 945180 NP_415120.1 CDS fepC NC_000913.3 619384 620199 R ATP-binding component of ferric enterobactin transport; iron-enterobactin transporter subunit complement(619384..620199) Escherichia coli str. K-12 substr. MG1655 945201 NP_415121.1 CDS fepG NC_000913.3 620196 621188 R ferric enterobactin transport protein; membrane component of ABC superfamily; iron-enterobactin transporter subunit complement(620196..621188) Escherichia coli str. K-12 substr. MG1655 945209 NP_415122.1 CDS fepD NC_000913.3 621185 622189 R ferric enterobactin (enterochelin) transport; membrane component of ABC superfamily; iron-enterobactin transporter subunit complement(621185..622189) Escherichia coli str. K-12 substr. MG1655 945214 NP_415123.1 CDS entS NC_000913.3 622300 623550 D putative transport; enterobactin exporter, iron-regulated 622300..623550 Escherichia coli str. K-12 substr. MG1655 946268 NP_415124.1 CDS fepB NC_000913.3 623554 624510 R ferric enterobactin (enterochelin) binding protein; periplasmic component; periplasmic-binding component of ABC superfamily; iron-enterobactin transporter subunit complement(623554..624510) Escherichia coli str. K-12 substr. MG1655 947538 NP_415125.1 CDS entC NC_000913.3 624885 626060 D isochorismate hydroxymutase 2, enterochelin biosynthesis; isochorismate synthase 1 624885..626060 Escherichia coli str. K-12 substr. MG1655 945511 NP_415126.1 CDS entE NC_000913.3 626070 627680 D 2,3-dihydroxybenzoate-AMP ligase; 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex 626070..627680 Escherichia coli str. K-12 substr. MG1655 947426 NP_415127.1 CDS entB NC_000913.3 627694 628551 D 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; isochorismatase 627694..628551 Escherichia coli str. K-12 substr. MG1655 946178 NP_415128.1 CDS entA NC_000913.3 628551 629297 D 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 628551..629297 Escherichia coli str. K-12 substr. MG1655 945284 NP_415129.1 CDS entH NC_000913.3 629300 629713 D enterobactin synthesis proofreading thioesterase 629300..629713 Escherichia coli str. K-12 substr. MG1655 945215 NP_415130.1 CDS cstA NC_000913.3 629894 631999 D carbon starvation protein involved in peptide utilization; APC peptide transporter family protein 629894..631999 Escherichia coli str. K-12 substr. MG1655 945213 YP_588442.1 CDS ybdD NC_000913.3 632182 632379 D DUF466 family protein 632182..632379 Escherichia coli str. K-12 substr. MG1655 949021 NP_415132.1 CDS ybdH NC_000913.3 632389 633477 R putative oxidoreductase complement(632389..633477) Escherichia coli str. K-12 substr. MG1655 945212 NP_415133.1 CDS ybdL NC_000913.3 633586 634746 D PLP-dependent methionine aminotransferase; methionine aminotransferase, PLP-dependent 633586..634746 Escherichia coli str. K-12 substr. MG1655 945211 NP_415134.1 CDS ybdM NC_000913.3 634747 635376 R Spo0J family protein, ParB-like nuclease domain complement(634747..635376) Escherichia coli str. K-12 substr. MG1655 945206 NP_415135.1 CDS ybdN NC_000913.3 635349 636569 R PAPS reductase-like domain protein complement(635349..636569) Escherichia coli str. K-12 substr. MG1655 945205 NP_415136.1 CDS ybdO NC_000913.3 636716 637618 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(636716..637618) Escherichia coli str. K-12 substr. MG1655 945216 NP_415137.2 CDS dsbG NC_000913.3 637827 638573 R thiol:disulfide interchange protein; thiol:disulfide interchange protein, periplasmic complement(637827..638573) Escherichia coli str. K-12 substr. MG1655 945224 NP_415138.1 CDS ahpC NC_000913.3 638945 639508 D alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides; alkyl hydroperoxide reductase, C22 subunit 638945..639508 Escherichia coli str. K-12 substr. MG1655 945225 NP_415139.2 CDS ahpF NC_000913.3 639753 641318 D alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides; alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 639753..641318 Escherichia coli str. K-12 substr. MG1655 947540 NP_415140.1 CDS uspG NC_000913.3 641439 641867 R universal stress protein UP12 complement(641439..641867) Escherichia coli str. K-12 substr. MG1655 945229 NP_415141.1 CDS ybdR NC_000913.3 642088 643326 D putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase 642088..643326 Escherichia coli str. K-12 substr. MG1655 949067 NP_415143.1 CDS rnk NC_000913.3 643557 643967 R regulator of nucleoside diphosphate kinase complement(643557..643967) Escherichia coli str. K-12 substr. MG1655 947546 NP_415144.1 CDS rna NC_000913.3 644197 645003 R RNase I, cleaves phosphodiester bond between any two nucleotides; ribonuclease I complement(644197..645003) Escherichia coli str. K-12 substr. MG1655 949065 NP_415145.1 CDS citT NC_000913.3 645117 646580 R citrate:succinate antiporter complement(645117..646580) Escherichia coli str. K-12 substr. MG1655 949070 NP_415146.1 CDS citG NC_000913.3 646631 647509 R 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase complement(646631..647509) Escherichia coli str. K-12 substr. MG1655 946395 NP_415147.1 CDS citX NC_000913.3 647484 648035 R apo-citrate lyase phosphoribosyl-dephospho-CoA transferase complement(647484..648035) Escherichia coli str. K-12 substr. MG1655 949084 NP_415148.1 CDS citF NC_000913.3 648039 649571 R citrate lyase alpha chain; citrate lyase, citrate-ACP transferase (alpha) subunit complement(648039..649571) Escherichia coli str. K-12 substr. MG1655 945230 NP_415149.4 CDS citE NC_000913.3 649582 650490 R citrate lyase, citryl-ACP lyase (beta) subunit complement(649582..650490) Escherichia coli str. K-12 substr. MG1655 945406 NP_415150.1 CDS citD NC_000913.3 650487 650783 R citrate lyase acyl carrier protein (gamma chain); citrate lyase, acyl carrier (gamma) subunit complement(650487..650783) Escherichia coli str. K-12 substr. MG1655 945415 NP_415151.4 CDS citC NC_000913.3 650798 651856 R citrate lyase synthetase (citrate (pro-3S)-lyase ligase; [citrate [pro-3S]-lyase] ligase complement(650798..651856) Escherichia coli str. K-12 substr. MG1655 945231 NP_415152.1 CDS citA NC_000913.3 652235 653893 D putative sensor-type protein; sensory histidine kinase in two-component regulatory system with CitB 652235..653893 Escherichia coli str. K-12 substr. MG1655 945233 NP_415153.1 CDS citB NC_000913.3 653862 654542 D sequence similarity to Shigella regulator; response regulator in two-component regulatory system with CitA 653862..654542 Escherichia coli str. K-12 substr. MG1655 947008 NP_415154.1 CDS dcuC NC_000913.3 654583 655968 R transport of dicarboxylates; anaerobic C4-dicarboxylate transport complement(654583..655968) Escherichia coli str. K-12 substr. MG1655 945000 NP_415155.1 CDS pagP NC_000913.3 656557 657117 D phospholipid:lipid A palmitoyltransferase 656557..657117 Escherichia coli str. K-12 substr. MG1655 946360 NP_415156.1 CDS cspE NC_000913.3 657292 657501 D cold shock protein; constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein 657292..657501 Escherichia coli str. K-12 substr. MG1655 947024 NP_415157.1 CDS flc NC_000913.3 657555 657938 R fluoride efflux channel, dual topology membrane protein complement(657555..657938) Escherichia coli str. K-12 substr. MG1655 945798 b4581 CDS ybeM NC_000913.3 658031 658818 D pseudogene, C-N hydrolase superfamily homology;putative enzyme; Not classified; putative amidase; join(658031..658225,658225..658818) Escherichia coli str. K-12 substr. MG1655 4056041 NP_415160.1 CDS tatE NC_000913.3 658947 659150 D TatABCE protein translocation system subunit 658947..659150 Escherichia coli str. K-12 substr. MG1655 945228 NP_415161.1 CDS lipA NC_000913.3 659251 660216 R lipoate synthesis, sulfur insertion?; lipoate synthase complement(659251..660216) Escherichia coli str. K-12 substr. MG1655 945227 NP_415162.4 CDS ybeF NC_000913.3 660425 661378 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(660425..661378) Escherichia coli str. K-12 substr. MG1655 945219 NP_415163.2 CDS lipB NC_000913.3 661637 662278 R protein of lipoate biosynthesis; octanoyltransferase; octanoyl-[ACP]:protein N-octanoyltransferase complement(661637..662278) Escherichia coli str. K-12 substr. MG1655 945217 NP_415164.1 CDS ybeD NC_000913.3 662379 662642 R UPF0250 family protein complement(662379..662642) Escherichia coli str. K-12 substr. MG1655 945220 NP_415165.1 CDS dacA NC_000913.3 662752 663963 R D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) complement(662752..663963) Escherichia coli str. K-12 substr. MG1655 945222 NP_415166.1 CDS rlpA NC_000913.3 664102 665190 R a minor lipoprotein; septal ring protein, suppressor of prc, minor lipoprotein complement(664102..665190) Escherichia coli str. K-12 substr. MG1655 945241 NP_415167.1 CDS mrdB NC_000913.3 665201 666313 R rod shape-determining membrane protein; sensitivity to radiation and drugs; cell wall shape-determining protein complement(665201..666313) Escherichia coli str. K-12 substr. MG1655 945238 NP_415168.1 CDS mrdA NC_000913.3 666316 668217 R cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2; transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) complement(666316..668217) Escherichia coli str. K-12 substr. MG1655 945240 NP_415169.1 CDS rlmH NC_000913.3 668248 668715 R 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent complement(668248..668715) Escherichia coli str. K-12 substr. MG1655 945239 NP_415170.4 CDS rsfS NC_000913.3 668719 669036 R ribosomal silencing factor complement(668719..669036) Escherichia coli str. K-12 substr. MG1655 945237 NP_415171.1 CDS cobC NC_000913.3 669296 669907 R homolog of Salmonella cobC, a phosphohistidine protein; putative alpha-ribazole-5'-P phosphatase complement(669296..669907) Escherichia coli str. K-12 substr. MG1655 945246 NP_415172.1 CDS nadD NC_000913.3 669931 670572 R nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent complement(669931..670572) Escherichia coli str. K-12 substr. MG1655 945248 NP_415173.1 CDS holA NC_000913.3 670574 671605 R DNA polymerase III, delta subunit complement(670574..671605) Escherichia coli str. K-12 substr. MG1655 947573 NP_415174.1 CDS lptE NC_000913.3 671605 672186 R a minor lipoprotein; LPS assembly OM complex LptDE, lipoprotein component complement(671605..672186) Escherichia coli str. K-12 substr. MG1655 946257 NP_415175.1 CDS leuS NC_000913.3 672201 674783 R leucine tRNA synthetase; leucyl-tRNA synthetase complement(672201..674783) Escherichia coli str. K-12 substr. MG1655 947497 NP_415176.1 CDS ybeL NC_000913.3 675018 675500 D putative alpha helical protein; DUF1451 family protein 675018..675500 Escherichia coli str. K-12 substr. MG1655 945252 NP_415177.4 CDS ybeQ NC_000913.3 675570 676547 R Sel1 family TPR-like repeat protein complement(675570..676547) Escherichia coli str. K-12 substr. MG1655 945251 NP_415178.1 CDS ybeR NC_000913.3 676711 677418 D uncharacterized protein 676711..677418 Escherichia coli str. K-12 substr. MG1655 945249 NP_415179.1 CDS djlB NC_000913.3 677415 678842 D putative enzyme of polynucleotide modification; putative HscC co-chaperone, uncharacterized J domain-containing protein 677415..678842 Escherichia coli str. K-12 substr. MG1655 945245 NP_415180.1 CDS ybeT NC_000913.3 678852 679406 R Sel1 family TPR-like repeat protein complement(678852..679406) Escherichia coli str. K-12 substr. MG1655 945243 NP_415181.1 CDS ybeU NC_000913.3 679508 680215 D putative tRNA ligase; DUF1266 family protein 679508..680215 Escherichia coli str. K-12 substr. MG1655 945244 NP_415182.1 CDS djlC NC_000913.3 680212 681663 D J domain-containing HscC co-chaperone; Hsc56 680212..681663 Escherichia coli str. K-12 substr. MG1655 945253 NP_415183.1 CDS hscC NC_000913.3 681723 683393 R Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription complement(681723..683393) Escherichia coli str. K-12 substr. MG1655 945218 NP_415184.1 CDS rihA NC_000913.3 683477 684412 R ribonucleoside hydrolase 1 complement(683477..684412) Escherichia coli str. K-12 substr. MG1655 945503 NP_415185.1 CDS gltL NC_000913.3 684530 685255 R ATP-binding protein of glutamate/aspartate transport system; glutamate, aspartate ABC transporter ATP-binding subunit complement(684530..685255) Escherichia coli str. K-12 substr. MG1655 945254 NP_415186.1 CDS gltK NC_000913.3 685255 685929 R glutamate/aspartate transport system permease; membrane component of ABC superfamily; glutamate, aspartate ABC transporter permease subunit complement(685255..685929) Escherichia coli str. K-12 substr. MG1655 947354 NP_415187.1 CDS gltJ NC_000913.3 685929 686669 R glutamate/aspartate transport system permease; membrane component of ABC superfamily; glutamate, aspartate ABC transporter permease subunit complement(685929..686669) Escherichia coli str. K-12 substr. MG1655 945443 NP_415188.1 CDS gltI NC_000913.3 686839 687747 R periplasmic-binding component of ABC superfamily; glutamate, aspartate binding protein, periplasmic; part of GltJKLI ABC transporter complement(686839..687747) Escherichia coli str. K-12 substr. MG1655 946938 NP_415189.1 CDS insH1 NC_000913.3 687997 689013 R IS5 transposase and trans-activator complement(687997..689013) Escherichia coli str. K-12 substr. MG1655 944917 NP_415190.1 CDS lnt NC_000913.3 689343 690881 R apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane; apolipoprotein N-acyltransferase complement(689343..690881) Escherichia coli str. K-12 substr. MG1655 946201 NP_415191.1 CDS ybeX NC_000913.3 690906 691784 R putative transport protein; putative ion transport complement(690906..691784) Escherichia coli str. K-12 substr. MG1655 946417 NP_415192.1 CDS ybeY NC_000913.3 691874 692341 R ssRNA-specific endoribonuclease; co-endoribonuclease working with RNase R in 16S rRNA 3' end maturation and quality control; rRNA transcription antitermination factor complement(691874..692341) Escherichia coli str. K-12 substr. MG1655 946430 NP_415193.2 CDS ybeZ NC_000913.3 692338 693378 R putative ATP-binding protein in pho regulon; PhoH-like heat shock protein complement(692338..693378) Escherichia coli str. K-12 substr. MG1655 948044 NP_415194.1 CDS miaB NC_000913.3 693531 694955 R tRNA-i(6)A37 methylthiotransferase complement(693531..694955) Escherichia coli str. K-12 substr. MG1655 945260 NP_415195.1 CDS ubiF NC_000913.3 695101 696276 D 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase 695101..696276 Escherichia coli str. K-12 substr. MG1655 945261 NP_415200.1 CDS asnB NC_000913.3 697513 699177 R asparagine synthetase B complement(697513..699177) Escherichia coli str. K-12 substr. MG1655 945281 NP_415201.1 CDS umpH NC_000913.3 699574 700326 R N-acetylglucosamine metabolism; UMP phosphatase complement(699574..700326) Escherichia coli str. K-12 substr. MG1655 945283 NP_415202.1 CDS nagC NC_000913.3 700374 701594 R transcriptional repressor of nag (N-acetylglucosamine) operon; N-acetylglucosamine-inducible nag divergent operon transcriptional repressor complement(700374..701594) Escherichia coli str. K-12 substr. MG1655 945285 NP_415203.1 CDS nagA NC_000913.3 701603 702751 R N-acetylglucosamine-6-phosphate deacetylase complement(701603..702751) Escherichia coli str. K-12 substr. MG1655 945289 NP_415204.1 CDS nagB NC_000913.3 702811 703611 R glucosamine-6-phosphate deaminase complement(702811..703611) Escherichia coli str. K-12 substr. MG1655 945290 NP_415205.1 CDS nagE NC_000913.3 703944 705890 D PTS system, N-acetylglucosamine-specific enzyme IIABC; fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB, and IIA components 703944..705890 Escherichia coli str. K-12 substr. MG1655 945292 NP_415206.1 CDS glnS NC_000913.3 706093 707757 D glutamine tRNA synthetase; glutamyl-tRNA synthetase 706093..707757 Escherichia coli str. K-12 substr. MG1655 945310 NP_415207.1 CDS chiP NC_000913.3 708334 709740 D chitoporin, uptake of chitosugars 708334..709740 Escherichia coli str. K-12 substr. MG1655 945296 NP_415208.1 CDS chiQ NC_000913.3 709790 710116 D chitosugar-induced verified lipoprotein 709790..710116 Escherichia coli str. K-12 substr. MG1655 945713 NP_415209.1 CDS fur NC_000913.3 710200 710646 R negative regulator; ferric iron uptake regulon transcriptional repressor; autorepressor complement(710200..710646) Escherichia coli str. K-12 substr. MG1655 945295 YP_001491546.1 CDS uof NC_000913.3 710639 710725 R ryhB-regulated fur leader peptide complement(710639..710725) Escherichia coli str. K-12 substr. MG1655 5625562 NP_415210.1 CDS fldA NC_000913.3 710935 711465 R flavodoxin 1 complement(710935..711465) Escherichia coli str. K-12 substr. MG1655 945293 NP_415211.2 CDS ybfE NC_000913.3 711605 711898 R LexA-regulated protein, CopB family complement(711605..711898) Escherichia coli str. K-12 substr. MG1655 945291 NP_415212.1 CDS ybfF NC_000913.3 712038 712802 R acyl-CoA esterase complement(712038..712802) Escherichia coli str. K-12 substr. MG1655 945288 NP_415213.1 CDS seqA NC_000913.3 712987 713532 D negative modulator of initiation of replication 712987..713532 Escherichia coli str. K-12 substr. MG1655 945272 NP_415214.1 CDS pgm NC_000913.3 713558 715198 D phosphoglucomutase 713558..715198 Escherichia coli str. K-12 substr. MG1655 945271 NP_415215.1 CDS ybfP NC_000913.3 715412 715906 D putative pectinase; lipoprotein 715412..715906 Escherichia coli str. K-12 substr. MG1655 945274 b0691 CDS ybfG NC_000913.3 715947 716597 R pseudogene; complement(715947..716597) Escherichia coli str. K-12 substr. MG1655 945287 b4636 CDS ybfI NC_000913.3 716721 716870 R pseudogene; complement(716721..716870) Escherichia coli str. K-12 substr. MG1655 5625563 NP_415219.1 CDS potE NC_000913.3 716946 718265 R putrescine transport protein; putrescine/proton symporter: putrescine/ornithine antiporter complement(716946..718265) Escherichia coli str. K-12 substr. MG1655 945422 NP_415220.1 CDS speF NC_000913.3 718262 720460 R ornithine decarboxylase isozyme, inducible complement(718262..720460) Escherichia coli str. K-12 substr. MG1655 945297 YP_001165310.1 CDS ybfK NC_000913.3 720583 720840 D uncharacterized protein 720583..720840 Escherichia coli str. K-12 substr. MG1655 948953 NP_415222.1 CDS kdpE NC_000913.3 721056 721733 R regulator of kdp operon (transcriptional effector); response regulator in two-component regulatory system with KdpD complement(721056..721733) Escherichia coli str. K-12 substr. MG1655 945302 NP_415223.1 CDS kdpD NC_000913.3 721730 724414 R sensor for high-affinity potassium transport system; sensory histidine kinase; fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein complement(721730..724414) Escherichia coli str. K-12 substr. MG1655 946744 NP_415224.1 CDS kdpC NC_000913.3 724407 724979 R high-affinity potassium transport system; potassium translocating ATPase, subunit C complement(724407..724979) Escherichia coli str. K-12 substr. MG1655 947508 NP_415225.1 CDS kdpB NC_000913.3 724988 727036 R ATPase of high-affinity potassium transport system, B chain; potassium translocating ATPase, subunit B complement(724988..727036) Escherichia coli str. K-12 substr. MG1655 947450 NP_415226.1 CDS kdpA NC_000913.3 727059 728732 R ATPase of high-affinity potassium transport system, A chain; potassium translocating ATPase, subunit A complement(727059..728732) Escherichia coli str. K-12 substr. MG1655 946045 YP_588443.1 CDS kdpF NC_000913.3 728732 728821 R potassium ion accessory transporter subunit complement(728732..728821) Escherichia coli str. K-12 substr. MG1655 948946 NP_415228.1 CDS ybfA NC_000913.3 729134 729340 D DUF2517 family protein 729134..729340 Escherichia coli str. K-12 substr. MG1655 947452 NP_415229.1 CDS rhsC NC_000913.3 729583 733776 D Rhs family putative polymorphic toxin 729583..733776 Escherichia coli str. K-12 substr. MG1655 945306 NP_415230.1 CDS ybfB NC_000913.3 733776 734102 D putative membrane protein 733776..734102 Escherichia coli str. K-12 substr. MG1655 947566 b0703 CDS rhsO NC_000913.3 734133 735653 D pseudogene, Rhs family protein; 734133..735653 Escherichia coli str. K-12 substr. MG1655 946124 NP_415232.1 CDS ybfC NC_000913.3 735650 736219 D putative periplasmic protein 735650..736219 Escherichia coli str. K-12 substr. MG1655 947288 b4514 CDS ybfQ NC_000913.3 736445 736684 D pseudogene, H repeat-associated protein; 736445..736684 Escherichia coli str. K-12 substr. MG1655 1450245 b0705 CDS ybfL NC_000913.3 736825 737961 D pseudogene, DDE domain transposase family;putative factor; Not classified; putative receptor protein; 736825..737961 Escherichia coli str. K-12 substr. MG1655 947075 NP_415234.1 CDS ybfD NC_000913.3 738092 738853 D putative DNA ligase; H repeat-associated putative transposase 738092..738853 Escherichia coli str. K-12 substr. MG1655 945176 NP_415235.1 CDS ybgA NC_000913.3 739001 739510 D DUF1722 family protein 739001..739510 Escherichia coli str. K-12 substr. MG1655 944853 NP_415236.1 CDS phr NC_000913.3 739507 740925 D deoxyribodipyrimidine photolyase (photoreactivation); deoxyribodipyrimidine photolyase, FAD-binding 739507..740925 Escherichia coli str. K-12 substr. MG1655 947005 NP_415237.1 CDS dtpD NC_000913.3 741075 742556 R putative transport protein; dipeptide and tripeptide permease D complement(741075..742556) Escherichia coli str. K-12 substr. MG1655 947368 NP_415238.1 CDS ybgI NC_000913.3 742827 743570 D NIF3 family metal-binding protein 742827..743570 Escherichia coli str. K-12 substr. MG1655 945824 NP_415239.1 CDS ybgJ NC_000913.3 743593 744249 D putative carboxylase; putative allophanate hydrolase, subunit 1 743593..744249 Escherichia coli str. K-12 substr. MG1655 945311 NP_415240.1 CDS ybgK NC_000913.3 744243 745175 D putative carboxylase; putative allophanate hydrolase, subunit 2 744243..745175 Escherichia coli str. K-12 substr. MG1655 945317 NP_415241.1 CDS ybgL NC_000913.3 745165 745899 D putative lactam utilization protein; UPF0271 family protein 745165..745899 Escherichia coli str. K-12 substr. MG1655 945318 NP_415242.1 CDS nei NC_000913.3 745935 746726 D endonuclease VIII and DNA N-glycosylase with an AP lyase activity; endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase 745935..746726 Escherichia coli str. K-12 substr. MG1655 945320 NP_415243.4 CDS abrB NC_000913.3 746723 747769 R putative transport protein; regulator of aidB expression; inner membrane protein complement(746723..747769) Escherichia coli str. K-12 substr. MG1655 945321 NP_415244.4 CDS ybgO NC_000913.3 747921 748982 R putative fimbrial protein complement(747921..748982) Escherichia coli str. K-12 substr. MG1655 947550 NP_415245.1 CDS ybgP NC_000913.3 748979 749707 R putative chaperone; putative periplasmic pilin chaperone complement(748979..749707) Escherichia coli str. K-12 substr. MG1655 945110 NP_415246.2 CDS ybgQ NC_000913.3 749722 752169 R putative outer membrane protein complement(749722..752169) Escherichia coli str. K-12 substr. MG1655 946537 NP_415247.1 CDS ybgD NC_000913.3 752229 752795 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(752229..752795) Escherichia coli str. K-12 substr. MG1655 945325 NP_415248.1 CDS gltA NC_000913.3 753185 754468 R citrate synthase complement(753185..754468) Escherichia coli str. K-12 substr. MG1655 945323 NP_415249.1 CDS sdhC NC_000913.3 755177 755566 D succinate dehydrogenase, cytochrome b556; succinate dehydrogenase, membrane subunit, binds cytochrome b556 755177..755566 Escherichia coli str. K-12 substr. MG1655 945316 NP_415250.1 CDS sdhD NC_000913.3 755560 755907 D succinate dehydrogenase, hydrophobic subunit; succinate dehydrogenase, membrane subunit, binds cytochrome b556 755560..755907 Escherichia coli str. K-12 substr. MG1655 945322 NP_415251.1 CDS sdhA NC_000913.3 755907 757673 D succinate dehydrogenase, flavoprotein subunit 755907..757673 Escherichia coli str. K-12 substr. MG1655 945402 NP_415252.1 CDS sdhB NC_000913.3 757689 758405 D succinate dehydrogenase, iron sulfur protein; succinate dehydrogenase, FeS subunit 757689..758405 Escherichia coli str. K-12 substr. MG1655 945300 NP_415254.1 CDS sucA NC_000913.3 758706 761507 D 2-oxoglutarate dehydrogenase (decarboxylase component); 2-oxoglutarate decarboxylase, thiamine triphosphate-binding 758706..761507 Escherichia coli str. K-12 substr. MG1655 945303 NP_415255.1 CDS sucB NC_000913.3 761522 762739 D 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component); dihydrolipoyltranssuccinase 761522..762739 Escherichia coli str. K-12 substr. MG1655 945307 NP_415256.1 CDS sucC NC_000913.3 763014 764180 D succinyl-CoA synthetase, beta subunit 763014..764180 Escherichia coli str. K-12 substr. MG1655 945312 NP_415257.1 CDS sucD NC_000913.3 764180 765049 D succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit 764180..765049 Escherichia coli str. K-12 substr. MG1655 945314 NP_415258.1 CDS mngR NC_000913.3 765153 765875 R transcriptional regulator of succinylCoA synthetase operon; Transcriptional repressor for the mannosyl-D-glycerate catabolic operon complement(765153..765875) Escherichia coli str. K-12 substr. MG1655 945371 NP_415259.1 CDS mngA NC_000913.3 765984 767960 D protein modification enzyme, induction of ompC; fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component 765984..767960 Escherichia coli str. K-12 substr. MG1655 945355 NP_415260.1 CDS mngB NC_000913.3 767978 770611 D putative sugar hydrolase; alpha-mannosidase 767978..770611 Escherichia coli str. K-12 substr. MG1655 945359 NP_415261.2 CDS cydA NC_000913.3 771458 773026 D cytochrome d terminal oxidase, polypeptide subunit I; cytochrome d terminal oxidase, subunit I 771458..773026 Escherichia coli str. K-12 substr. MG1655 945341 NP_415262.1 CDS cydB NC_000913.3 773042 774181 D cytochrome d terminal oxidase polypeptide subunit II; cytochrome d terminal oxidase, subunit II 773042..774181 Escherichia coli str. K-12 substr. MG1655 945347 YP_588444.1 CDS cydX NC_000913.3 774196 774309 D cytochrome d (bd-I) ubiquinol oxidase subunit X 774196..774309 Escherichia coli str. K-12 substr. MG1655 1450246 NP_415263.1 CDS ybgE NC_000913.3 774309 774602 D putative inner membrane protein in cydABX-ybgE operon 774309..774602 Escherichia coli str. K-12 substr. MG1655 945326 NP_415264.1 CDS ybgC NC_000913.3 774752 775156 D acyl-CoA thioester hydrolase 774752..775156 Escherichia coli str. K-12 substr. MG1655 948907 NP_415265.1 CDS tolQ NC_000913.3 775153 775845 D inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins; membrane spanning protein in TolA-TolQ-TolR complex 775153..775845 Escherichia coli str. K-12 substr. MG1655 948900 NP_415266.1 CDS tolR NC_000913.3 775849 776277 D putative inner membrane protein, involved in the tonB-independent uptake of group A colicins; membrane spanning protein in TolA-TolQ-TolR complex 775849..776277 Escherichia coli str. K-12 substr. MG1655 945328 NP_415267.1 CDS tolA NC_000913.3 776342 777607 D membrane spanning protein, required for outer membrane integrity; membrane anchored protein in TolA-TolQ-TolR complex 776342..777607 Escherichia coli str. K-12 substr. MG1655 946625 NP_415268.1 CDS tolB NC_000913.3 777740 779032 D periplasmic protein involved in the tonb-independent uptake of group A colicins; periplasmic protein 777740..779032 Escherichia coli str. K-12 substr. MG1655 945429 NP_415269.1 CDS pal NC_000913.3 779067 779588 D peptidoglycan-associated lipoprotein; peptidoglycan-associated outer membrane lipoprotein 779067..779588 Escherichia coli str. K-12 substr. MG1655 945004 NP_415270.1 CDS ybgF NC_000913.3 779598 780389 D periplasmic TolA-binding protein 779598..780389 Escherichia coli str. K-12 substr. MG1655 947227 NP_415271.1 CDS nadA NC_000913.3 782085 783128 D quinolinate synthetase, A protein; quinolinate synthase, subunit A 782085..783128 Escherichia coli str. K-12 substr. MG1655 945351 NP_415272.1 CDS pnuC NC_000913.3 783166 783885 D required for NMN transport; nicotinamide riboside transporter 783166..783885 Escherichia coli str. K-12 substr. MG1655 945350 NP_415273.1 CDS zitB NC_000913.3 783882 784823 R putative transport system permease protein; zinc efflux system complement(783882..784823) Escherichia coli str. K-12 substr. MG1655 945348 NP_415274.1 CDS ybgS NC_000913.3 784937 785317 R putative homeobox protein; putative periplasmic protein complement(784937..785317) Escherichia coli str. K-12 substr. MG1655 945356 NP_415275.1 CDS aroG NC_000913.3 785633 786685 D 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 785633..786685 Escherichia coli str. K-12 substr. MG1655 945605 NP_415276.1 CDS gpmA NC_000913.3 786843 787595 R phosphoglyceromutase 1 complement(786843..787595) Escherichia coli str. K-12 substr. MG1655 945068 NP_415277.1 CDS galM NC_000913.3 787797 788837 R aldose 1-epimerase; type-1 mutarotase complement(787797..788837) Escherichia coli str. K-12 substr. MG1655 944943 NP_415278.1 CDS galK NC_000913.3 788831 789979 R galactokinase complement(788831..789979) Escherichia coli str. K-12 substr. MG1655 945358 NP_415279.1 CDS galT NC_000913.3 789983 791029 R galactose-1-phosphate uridylyltransferase complement(789983..791029) Escherichia coli str. K-12 substr. MG1655 945357 NP_415280.3 CDS galE NC_000913.3 791039 792055 R UDP-galactose-4-epimerase complement(791039..792055) Escherichia coli str. K-12 substr. MG1655 945354 NP_415281.1 CDS modF NC_000913.3 792316 793788 R ATP-binding component of molybdate transport system; fused molybdate transporter subunits of ABC superfamily: ATP-binding components complement(792316..793788) Escherichia coli str. K-12 substr. MG1655 945368 NP_415282.1 CDS modE NC_000913.3 793856 794644 R molybdate uptake regulatory protein; transcriptional repressor for the molybdenum transport operon modABC complement(793856..794644) Escherichia coli str. K-12 substr. MG1655 945366 NP_415283.1 CDS acrZ NC_000913.3 794773 794922 D AcrAB-TolC efflux pump accessory protein, membrane-associated 794773..794922 Escherichia coli str. K-12 substr. MG1655 945365 NP_415284.1 CDS modA NC_000913.3 795089 795862 D molybdate-binding periplasmic protein; permease; periplasmic-binding component of ABC superfamily; molybdate transporter subunit 795089..795862 Escherichia coli str. K-12 substr. MG1655 945364 NP_415285.1 CDS modB NC_000913.3 795862 796551 D molybdate transport permease protein; membrane component of ABC superfamily; molybdate transporter subunit 795862..796551 Escherichia coli str. K-12 substr. MG1655 945361 NP_415286.1 CDS modC NC_000913.3 796554 797612 D ATP-binding component of molybdate transport; molybdate transporter subunit 796554..797612 Escherichia coli str. K-12 substr. MG1655 945362 NP_415287.1 CDS ybhA NC_000913.3 797613 798431 R putative phosphatase; pyridoxal phosphate (PLP) phosphatase complement(797613..798431) Escherichia coli str. K-12 substr. MG1655 945372 NP_415288.1 CDS pgl NC_000913.3 798586 799581 D putative isomerase; 6-phosphogluconolactonase 798586..799581 Escherichia coli str. K-12 substr. MG1655 946398 NP_415289.4 CDS ybhD NC_000913.3 799622 800575 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(799622..800575) Escherichia coli str. K-12 substr. MG1655 944869 NP_415290.1 CDS ybhH NC_000913.3 800759 801811 D putative PrpF family isomerase 800759..801811 Escherichia coli str. K-12 substr. MG1655 945375 NP_415291.1 CDS ybhI NC_000913.3 801887 803320 D putative membrane pump protein; putative transporter 801887..803320 Escherichia coli str. K-12 substr. MG1655 945377 NP_415292.2 CDS ybhJ NC_000913.3 803503 805764 D putative enzyme; putative hydratase 803503..805764 Escherichia coli str. K-12 substr. MG1655 945380 NP_415293.1 CDS ybhC NC_000913.3 805998 807281 R putative pectinesterase; acyl-CoA thioesterase, lipoprotein complement(805998..807281) Escherichia coli str. K-12 substr. MG1655 945381 NP_415294.1 CDS ybhB NC_000913.3 807433 807909 R kinase inhibitor homolog, UPF0098 family complement(807433..807909) Escherichia coli str. K-12 substr. MG1655 945383 NP_415295.1 CDS bioA NC_000913.3 807968 809257 R 7,8-diaminopelargonic acid synthetase; 7,8-diaminopelargonic acid synthase, PLP-dependent complement(807968..809257) Escherichia coli str. K-12 substr. MG1655 945376 NP_415296.1 CDS bioB NC_000913.3 809344 810384 D biotin synthesis, sulfur insertion?; biotin synthase 809344..810384 Escherichia coli str. K-12 substr. MG1655 945370 NP_415297.1 CDS bioF NC_000913.3 810381 811535 D 8-amino-7-oxononanoate synthase 810381..811535 Escherichia coli str. K-12 substr. MG1655 945384 NP_415298.1 CDS bioC NC_000913.3 811522 812277 D biotin biosynthesis; reaction prior to pimeloyl CoA; malonyl-ACP O-methyltransferase, SAM-dependent 811522..812277 Escherichia coli str. K-12 substr. MG1655 945388 NP_415299.1 CDS bioD NC_000913.3 812270 812947 D dethiobiotin synthetase 812270..812947 Escherichia coli str. K-12 substr. MG1655 945387 NP_415300.1 CDS uvrB NC_000913.3 813526 815547 D DNA repair; excision nuclease subunit B; excinulease of nucleotide excision repair, DNA damage recognition component 813526..815547 Escherichia coli str. K-12 substr. MG1655 945385 NP_415301.1 CDS ybhK NC_000913.3 815739 816647 R putative structural protein; putative NAD(P)-binding transferase complement(815739..816647) Escherichia coli str. K-12 substr. MG1655 945390 NP_415302.1 CDS moaA NC_000913.3 817044 818033 D molybdopterin biosynthesis, protein A; molybdopterin biosynthesis protein A 817044..818033 Escherichia coli str. K-12 substr. MG1655 945392 NP_415303.1 CDS moaB NC_000913.3 818055 818567 D moaB is not required for molybdopterin biosynthesis; inactive molybdopterin adenylyltransferase 818055..818567 Escherichia coli str. K-12 substr. MG1655 945396 NP_415304.1 CDS moaC NC_000913.3 818570 819055 D molybdopterin biosynthesis, protein C 818570..819055 Escherichia coli str. K-12 substr. MG1655 945397 NP_415305.1 CDS moaD NC_000913.3 819048 819293 D molybdopterin biosynthesis; molybdopterin synthase, small subunit 819048..819293 Escherichia coli str. K-12 substr. MG1655 945398 NP_415306.1 CDS moaE NC_000913.3 819295 819747 D molybdopterin converting factor, subunit 2; molybdopterin synthase, large subunit 819295..819747 Escherichia coli str. K-12 substr. MG1655 945399 NP_415307.1 CDS ybhL NC_000913.3 819884 820588 D UPF0005 family inner membrane protein 819884..820588 Escherichia coli str. K-12 substr. MG1655 945401 NP_415308.1 CDS ybhM NC_000913.3 820793 821506 D UPF0005 family inner membrane protein 820793..821506 Escherichia coli str. K-12 substr. MG1655 949001 NP_415309.1 CDS ybhN NC_000913.3 821542 822498 R UPF0104 family inner membrane protein complement(821542..822498) Escherichia coli str. K-12 substr. MG1655 945410 NP_415310.1 CDS clsB NC_000913.3 822498 823739 R cardiolipin synthase activity; cardiolipin synthase 2 complement(822498..823739) Escherichia coli str. K-12 substr. MG1655 945409 NP_415311.1 CDS ybhP NC_000913.3 823736 824497 R endo/exonuclease/phosphatase family protein complement(823736..824497) Escherichia coli str. K-12 substr. MG1655 945408 NP_415312.1 CDS ybhQ NC_000913.3 824630 825040 D inner membrane protein 824630..825040 Escherichia coli str. K-12 substr. MG1655 945405 NP_415313.1 CDS ybhR NC_000913.3 825002 826108 R inner membrane putative ABC superfamily transporter permease complement(825002..826108) Escherichia coli str. K-12 substr. MG1655 945403 NP_415314.1 CDS ybhS NC_000913.3 826119 827252 R inner membrane putative ABC superfamily transporter permease complement(826119..827252) Escherichia coli str. K-12 substr. MG1655 945411 NP_415315.4 CDS ybhF NC_000913.3 827245 828981 R putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component complement(827245..828981) Escherichia coli str. K-12 substr. MG1655 945413 NP_415316.1 CDS ybhG NC_000913.3 828974 829972 R putative membrane protein; putative membrane fusion protein (MFP) component of efflux pump, membrane anchor complement(828974..829972) Escherichia coli str. K-12 substr. MG1655 945414 NP_415317.4 CDS ybiH NC_000913.3 829972 830643 R putative transcriptional regulator; DUF1956 domain-containing tetR family putative transcriptional regulator complement(829972..830643) Escherichia coli str. K-12 substr. MG1655 945421 NP_415318.1 CDS rhlE NC_000913.3 830872 832236 D putative ATP-dependent RNA helicase; ATP-dependent RNA helicase 830872..832236 Escherichia coli str. K-12 substr. MG1655 945425 NP_415319.1 CDS ybiA NC_000913.3 832468 832950 R DUF1768 family protein complement(832468..832950) Escherichia coli str. K-12 substr. MG1655 945426 NP_415320.1 CDS dinG NC_000913.3 833070 835220 D probably ATP-dependent helicase; ATP-dependent DNA helicase 833070..835220 Escherichia coli str. K-12 substr. MG1655 945431 NP_415321.1 CDS ybiB NC_000913.3 835248 836210 D putative enzyme; putative family 3 glycosyltransferase 835248..836210 Escherichia coli str. K-12 substr. MG1655 945424 NP_415322.1 CDS ybiC NC_000913.3 836351 837436 D putative dehydrogenase 836351..837436 Escherichia coli str. K-12 substr. MG1655 945412 NP_415323.1 CDS ybiJ NC_000913.3 837665 837925 R DUF1471 family putative periplasmic protein complement(837665..837925) Escherichia coli str. K-12 substr. MG1655 945433 NP_415324.1 CDS ybiI NC_000913.3 838190 838456 R DksA-type zinc finger protein complement(838190..838456) Escherichia coli str. K-12 substr. MG1655 945434 NP_415325.4 CDS ybiX NC_000913.3 838530 839207 R putative enzyme; Fe(II)-dependent oxygenase superfamily protein complement(838530..839207) Escherichia coli str. K-12 substr. MG1655 947502 NP_415326.1 CDS fiu NC_000913.3 839249 841531 R ferric iron outer membrane transporter, TonB-dependent; siderophore receptor for ferri-dihydroxybenzoylserine, ferri-dihydroxybenzoate and other catecholate siderophores; surface receptor for colicins G, H, and E492; catecholate siderophore receptor Fiu complement(839249..841531) Escherichia coli str. K-12 substr. MG1655 946246 NP_415327.2 CDS mcbA NC_000913.3 841796 842056 R colanic acid mucoidy stimulation protein complement(841796..842056) Escherichia coli str. K-12 substr. MG1655 947523 NP_415328.4 CDS rlmF NC_000913.3 842332 843258 D 23S rRNA m(6)A1618 methyltransferase, SAM-dependent 842332..843258 Escherichia coli str. K-12 substr. MG1655 944938 NP_415329.4 CDS ybiO NC_000913.3 843255 845480 R putative transport protein; mechanosensitive channel protein, intermediate conductance complement(843255..845480) Escherichia coli str. K-12 substr. MG1655 945935 NP_415330.1 CDS glnQ NC_000913.3 845741 846463 R ATP-binding component of glutamine high-affinity transport system; glutamine transporter subunit complement(845741..846463) Escherichia coli str. K-12 substr. MG1655 945435 NP_415331.1 CDS glnP NC_000913.3 846460 847119 R glutamine high-affinity transport system; membrane component; glutamine transporter subunit complement(846460..847119) Escherichia coli str. K-12 substr. MG1655 945621 NP_415332.1 CDS glnH NC_000913.3 847258 848004 R periplasmic glutamine-binding protein; permease; glutamine transporter subunit complement(847258..848004) Escherichia coli str. K-12 substr. MG1655 944872 NP_415333.1 CDS dps NC_000913.3 848408 848911 R global regulator, starvation conditions; Fe-binding and storage protein; stress-inducible DNA-binding protetin complement(848408..848911) Escherichia coli str. K-12 substr. MG1655 945101 NP_415334.1 CDS rhtA NC_000913.3 849210 850097 R putative transmembrane subunit; threonine and homoserine efflux system complement(849210..850097) Escherichia coli str. K-12 substr. MG1655 947045 NP_415335.1 CDS ompX NC_000913.3 850450 850965 D outer membrane protein X 850450..850965 Escherichia coli str. K-12 substr. MG1655 944967 NP_415336.1 CDS ybiP NC_000913.3 851014 852597 R putative enzyme; putative EptAB family phosphoethanolamine transferase, inner membrane protein complement(851014..852597) Escherichia coli str. K-12 substr. MG1655 945360 YP_009029995.1 CDS mntS NC_000913.3 852869 852997 R Mn(2)-response protein, MntR-repressed complement(852869..852997) Escherichia coli str. K-12 substr. MG1655 14678509 NP_415338.1 CDS mntR NC_000913.3 853183 853650 D Mn(2+)-responsive manganese regulon transcriptional regulator 853183..853650 Escherichia coli str. K-12 substr. MG1655 945437 NP_415339.1 CDS ybiR NC_000913.3 853647 854765 D putative transporter 853647..854765 Escherichia coli str. K-12 substr. MG1655 945438 NP_415340.1 CDS ldtB NC_000913.3 854824 855744 R L,D-transpeptidase linking Lpp to murein complement(854824..855744) Escherichia coli str. K-12 substr. MG1655 945441 NP_415341.1 CDS ybiT NC_000913.3 855963 857555 D putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component 855963..857555 Escherichia coli str. K-12 substr. MG1655 945440 NP_415342.1 CDS ybiU NC_000913.3 857796 859061 R DUF1479 family protein complement(857796..859061) Escherichia coli str. K-12 substr. MG1655 945439 NP_415343.1 CDS ybiV NC_000913.3 859213 860028 R sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P complement(859213..860028) Escherichia coli str. K-12 substr. MG1655 945432 NP_415344.1 CDS ybiW NC_000913.3 860174 862606 R putative pyruvate formate lyase complement(860174..862606) Escherichia coli str. K-12 substr. MG1655 945444 NP_415345.2 CDS ybiY NC_000913.3 862612 863511 R putative pyruvate formate lyase activating enzyme complement(862612..863511) Escherichia coli str. K-12 substr. MG1655 945445 NP_415346.4 CDS fsaA NC_000913.3 863642 864304 D fructose-6-phosphate aldolase; fructose-6-phosphate aldolase 1 863642..864304 Escherichia coli str. K-12 substr. MG1655 945449 NP_415347.1 CDS moeB NC_000913.3 864380 865129 R molybdopterin biosynthesis; molybdopterin synthase sulfurylase complement(864380..865129) Escherichia coli str. K-12 substr. MG1655 945452 NP_415348.1 CDS moeA NC_000913.3 865129 866364 R molybdopterin biosynthesis; molybdopterin molybdenumtransferase; molybdopterin biosynthesis protein complement(865129..866364) Escherichia coli str. K-12 substr. MG1655 945454 NP_415349.1 CDS iaaA NC_000913.3 866568 867533 D putative asparaginase; Isoaspartyl peptidase 866568..867533 Escherichia coli str. K-12 substr. MG1655 945456 NP_415350.2 CDS gsiA NC_000913.3 867520 869391 D putative ATP-binding component of a transport system; glutathione transporter ATP-binding protein, ABC superfamily 867520..869391 Escherichia coli str. K-12 substr. MG1655 945457 NP_415351.1 CDS gsiB NC_000913.3 869411 870949 D putative transport protein; glutathione periplasmic binding protein, ABC superfamily transporter 869411..870949 Escherichia coli str. K-12 substr. MG1655 945459 NP_415352.1 CDS gsiC NC_000913.3 870967 871887 D putative transport system permease protein; glutathione transporter, permease component, ABC superfamily 870967..871887 Escherichia coli str. K-12 substr. MG1655 945460 NP_415353.1 CDS gsiD NC_000913.3 871890 872801 D putative transport system permease protein; glutathione transporter, permease component, ABC superfamily 871890..872801 Escherichia coli str. K-12 substr. MG1655 945461 NP_415354.1 CDS yliE NC_000913.3 872979 875327 D putative membrane-anchored cyclic-di-GMP phosphodiesterase 872979..875327 Escherichia coli str. K-12 substr. MG1655 945462 NP_415355.1 CDS yliF NC_000913.3 875335 876663 D putative membrane-anchored diguanylate cyclase 875335..876663 Escherichia coli str. K-12 substr. MG1655 945463 NP_415356.1 CDS rimO NC_000913.3 876710 878035 R ribosomal protein S12 methylthiotransferase; radical SAM superfamily complement(876710..878035) Escherichia coli str. K-12 substr. MG1655 945465 NP_415357.1 CDS bssR NC_000913.3 878248 878631 D putative receptor; repressor of biofilm formation by indole transport regulation 878248..878631 Escherichia coli str. K-12 substr. MG1655 945466 NP_415358.1 CDS yliI NC_000913.3 878742 879857 D putative dehydrogenase; soluble aldose sugar dehydrogenase 878742..879857 Escherichia coli str. K-12 substr. MG1655 945467 NP_415359.4 CDS gstB NC_000913.3 879854 880480 R putative transferase; glutathione S-transferase complement(879854..880480) Escherichia coli str. K-12 substr. MG1655 945469 NP_415360.1 CDS dacC NC_000913.3 880727 881929 D D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) 880727..881929 Escherichia coli str. K-12 substr. MG1655 945455 NP_415361.1 CDS deoR NC_000913.3 881976 882734 R transcriptional repressor for deo operon, tsx, nupG; deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx complement(881976..882734) Escherichia coli str. K-12 substr. MG1655 945453 NP_415362.1 CDS ybjG NC_000913.3 882792 883388 R undecaprenyl pyrophosphate phosphatase complement(882792..883388) Escherichia coli str. K-12 substr. MG1655 945450 NP_415363.1 CDS mdfA NC_000913.3 883673 884905 D proton motive force efflux pump; multidrug efflux system protein 883673..884905 Escherichia coli str. K-12 substr. MG1655 945448 NP_415364.1 CDS ybjH NC_000913.3 884946 885230 R uncharacterized protein complement(884946..885230) Escherichia coli str. K-12 substr. MG1655 945447 NP_415365.4 CDS ybjI NC_000913.3 885316 886131 R 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis complement(885316..886131) Escherichia coli str. K-12 substr. MG1655 945470 NP_415366.1 CDS ybjJ NC_000913.3 886131 887339 R putative DEOR-type transcriptional regulator; putative transporter complement(886131..887339) Escherichia coli str. K-12 substr. MG1655 945471 NP_415367.1 CDS rcdA NC_000913.3 887423 887959 D putative DEOR-type transcriptional regulator; transcriptional regulator of csgD and ybiJI; autoregulator 887423..887959 Escherichia coli str. K-12 substr. MG1655 945473 NP_415368.1 CDS ybjL NC_000913.3 888134 889819 R putative transport protein; putative transporter complement(888134..889819) Escherichia coli str. K-12 substr. MG1655 945474 NP_415369.1 CDS ybjM NC_000913.3 890089 890466 D inner membrane protein 890089..890466 Escherichia coli str. K-12 substr. MG1655 945477 NP_415370.1 CDS grxA NC_000913.3 890496 890753 R glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase; glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) complement(890496..890753) Escherichia coli str. K-12 substr. MG1655 945479 NP_415371.1 CDS ybjC NC_000913.3 890913 891200 D DUF1418 family protein 890913..891200 Escherichia coli str. K-12 substr. MG1655 945481 NP_415372.1 CDS nfsA NC_000913.3 891184 891906 D nitroreductase A, NADPH-dependent, FMN-dependent 891184..891906 Escherichia coli str. K-12 substr. MG1655 945483 NP_415373.1 CDS rimK NC_000913.3 891967 892869 D ribosomal protein S6 modification protein 891967..892869 Escherichia coli str. K-12 substr. MG1655 945484 NP_415374.1 CDS ybjN NC_000913.3 892957 893433 D putative sensory transduction regulator; negative regulator of motility; multicopy suppressor of coaA(Ts) 892957..893433 Escherichia coli str. K-12 substr. MG1655 945482 NP_415375.1 CDS potF NC_000913.3 893784 894896 D periplasmic putrescine-binding protein; permease protein; putrescine transporter subunit: periplasmic-binding component of ABC superfamily 893784..894896 Escherichia coli str. K-12 substr. MG1655 945480 NP_415376.4 CDS potG NC_000913.3 894991 896124 D ATP-binding component of putrescine transport system; putrescine transporter subunit: ATP-binding component of ABC superfamily 894991..896124 Escherichia coli str. K-12 substr. MG1655 945476 NP_415377.1 CDS potH NC_000913.3 896134 897087 D putrescine transport protein; permease; putrescine transporter subunit: membrane component of ABC superfamily 896134..897087 Escherichia coli str. K-12 substr. MG1655 945475 NP_415378.1 CDS potI NC_000913.3 897084 897929 D putrescine transport protein; permease; putrescine transporter subunit: membrane component of ABC superfamily 897084..897929 Escherichia coli str. K-12 substr. MG1655 945485 NP_415379.1 CDS ybjO NC_000913.3 897989 898477 D DUF2593 family inner membrane protein 897989..898477 Escherichia coli str. K-12 substr. MG1655 945488 NP_415380.1 CDS rlmC NC_000913.3 898518 899645 D putative enzyme; 23S rRNA m(5)U747 methyltransferase, SAM-dependent 898518..899645 Escherichia coli str. K-12 substr. MG1655 947260 NP_415381.1 CDS artJ NC_000913.3 899844 900575 R arginine 3rd transport system periplasmic binding protein; arginine binding protein, periplasmic complement(899844..900575) Escherichia coli str. K-12 substr. MG1655 948981 NP_415382.1 CDS artM NC_000913.3 900866 901534 R arginine 3rd transport system permease protein; membrane component of ABC superfamily; arginine transporter subunit complement(900866..901534) Escherichia coli str. K-12 substr. MG1655 949066 NP_415383.1 CDS artQ NC_000913.3 901534 902250 R arginine 3rd transport system permease protein; membrane component of ABC superfamily; arginine transporter subunit complement(901534..902250) Escherichia coli str. K-12 substr. MG1655 949046 NP_415384.1 CDS artI NC_000913.3 902257 902988 R arginine 3rd transport system periplasmic binding protein; arginine transporter subunit complement(902257..902988) Escherichia coli str. K-12 substr. MG1655 948988 NP_415385.1 CDS artP NC_000913.3 903006 903734 R ATP-binding component of 3rd arginine transport system; arginine transporter subunit complement(903006..903734) Escherichia coli str. K-12 substr. MG1655 945489 NP_415386.1 CDS ybjP NC_000913.3 903952 904467 R putative lipoprotein; lipoprotein complement(903952..904467) Escherichia coli str. K-12 substr. MG1655 945491 NP_415387.1 CDS ybjQ NC_000913.3 904593 904916 D UPF0145 family protein 904593..904916 Escherichia coli str. K-12 substr. MG1655 945493 NP_415388.1 CDS amiD NC_000913.3 904913 905743 D 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein 904913..905743 Escherichia coli str. K-12 substr. MG1655 945494 NP_415389.2 CDS ybjS NC_000913.3 905740 906753 R putative NAD(P)H-dependent oxidoreductase with NAD(P)-binding Rossmann-fold domain complement(905740..906753) Escherichia coli str. K-12 substr. MG1655 945495 NP_415390.4 CDS ybjT NC_000913.3 906852 908282 R putative NAD-dependent oxidoreductase complement(906852..908282) Escherichia coli str. K-12 substr. MG1655 945496 NP_415391.1 CDS ltaE NC_000913.3 908293 909294 R L-allo-threonine aldolase, PLP-dependent complement(908293..909294) Escherichia coli str. K-12 substr. MG1655 944955 NP_415392.1 CDS poxB NC_000913.3 909331 911049 R pyruvate oxidase; pyruvate dehydrogenase (pyruvate oxidase), thiamine triphosphate-binding, FAD-binding complement(909331..911049) Escherichia coli str. K-12 substr. MG1655 946132 NP_415393.1 CDS hcr NC_000913.3 911182 912150 R HCP oxidoreductase, NADH-dependent complement(911182..912150) Escherichia coli str. K-12 substr. MG1655 947660 NP_415394.4 CDS hcp NC_000913.3 912162 913814 R hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases complement(912162..913814) Escherichia coli str. K-12 substr. MG1655 946592 NP_415395.2 CDS ybjE NC_000913.3 913958 914857 R putative surface protein; putative transporter complement(913958..914857) Escherichia coli str. K-12 substr. MG1655 947142 NP_415396.1 CDS aqpZ NC_000913.3 915352 916047 R transmembrane water channel; aquaporin Z; aquaporin Z complement(915352..916047) Escherichia coli str. K-12 substr. MG1655 945497 NP_415397.1 CDS ybjD NC_000913.3 916473 918131 D putative OLD family ATP-dependent endonuclease; DUF2813 family protein 916473..918131 Escherichia coli str. K-12 substr. MG1655 945498 NP_415398.1 CDS ybjX NC_000913.3 918128 919120 R putative enzyme; DUF535 family protein complement(918128..919120) Escherichia coli str. K-12 substr. MG1655 946025 NP_415399.4 CDS macA NC_000913.3 919235 920350 D macrolide transporter subunit, membrane fusion protein (MFP) component 919235..920350 Escherichia coli str. K-12 substr. MG1655 947322 NP_415400.1 CDS macB NC_000913.3 920347 922293 D fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component 920347..922293 Escherichia coli str. K-12 substr. MG1655 945164 NP_415401.1 CDS cspD NC_000913.3 922366 922590 R stress induced DNA replication inhibitor.; inhibitor of DNA replication, cold shock protein homolog complement(922366..922590) Escherichia coli str. K-12 substr. MG1655 945669 NP_415402.1 CDS clpS NC_000913.3 922913 923233 D regulatory protein for ClpA substrate specificity 922913..923233 Escherichia coli str. K-12 substr. MG1655 948443 NP_415403.1 CDS clpA NC_000913.3 923264 925540 D ATP-binding component of serine protease; ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 923264..925540 Escherichia coli str. K-12 substr. MG1655 945764 NP_415404.1 CDS infA NC_000913.3 926225 926443 R protein chain initiation factor IF-1; translation initiation factor IF-1 complement(926225..926443) Escherichia coli str. K-12 substr. MG1655 945500 NP_415405.1 CDS aat NC_000913.3 926728 927432 R leucyl, phenylalanyl-tRNA-protein transferase; leucyl/phenylalanyl-tRNA-protein transferase complement(926728..927432) Escherichia coli str. K-12 substr. MG1655 945490 NP_415406.1 CDS cydC NC_000913.3 927474 929195 R ATP-binding component of cytochrome-related transport; fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component complement(927474..929195) Escherichia coli str. K-12 substr. MG1655 945504 NP_415407.1 CDS cydD NC_000913.3 929196 930962 R ATP-binding component of cytochrome-related transport, Zn sensitive; fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component complement(929196..930962) Escherichia coli str. K-12 substr. MG1655 949052 NP_415408.1 CDS trxB NC_000913.3 931085 932050 R thioredoxin reductase; thioredoxin reductase, FAD/NAD(P)-binding complement(931085..932050) Escherichia coli str. K-12 substr. MG1655 949054 NP_415409.1 CDS lrp NC_000913.3 932595 933089 D regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system; leucine-responsive global transcriptional regulator 932595..933089 Escherichia coli str. K-12 substr. MG1655 949051 NP_415410.1 CDS ftsK NC_000913.3 933224 937213 D cell division protein; DNA translocase at septal ring sorting daughter chromsomes 933224..937213 Escherichia coli str. K-12 substr. MG1655 945102 NP_415411.2 CDS lolA NC_000913.3 937372 937983 D periplasmic protein effects translocation of lipoproteins from inner membrane to outer; lipoprotein chaperone 937372..937983 Escherichia coli str. K-12 substr. MG1655 948989 NP_415412.1 CDS rarA NC_000913.3 937994 939337 D putative polynucleotide enzyme; DNA-dependent ATPase involved in processing recombination intermediates at replication forks 937994..939337 Escherichia coli str. K-12 substr. MG1655 945505 NP_415413.1 CDS serS NC_000913.3 939428 940720 D serine tRNA synthetase; also charges selenocystein tRNA with serine; seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine 939428..940720 Escherichia coli str. K-12 substr. MG1655 945506 NP_415414.4 CDS dmsA NC_000913.3 940959 943403 D anaerobic dimethyl sulfoxide reductase subunit A; dimethyl sulfoxide reductase, anaerobic, subunit A 940959..943403 Escherichia coli str. K-12 substr. MG1655 945508 NP_415415.1 CDS dmsB NC_000913.3 943414 944031 D anaerobic dimethyl sulfoxide reductase subunit B; dimethyl sulfoxide reductase, anaerobic, subunit B 943414..944031 Escherichia coli str. K-12 substr. MG1655 945507 NP_415416.1 CDS dmsC NC_000913.3 944033 944896 D anaerobic dimethyl sulfoxide reductase subunit C; dimethyl sulfoxide reductase, anaerobic, subunit C 944033..944896 Escherichia coli str. K-12 substr. MG1655 945502 NP_415417.1 CDS ycaC NC_000913.3 944931 945557 R putative isochorismatase family hydrolase complement(944931..945557) Escherichia coli str. K-12 substr. MG1655 945512 NP_415418.1 CDS ycaD NC_000913.3 945871 947019 D putative MFS-type transporter 945871..947019 Escherichia coli str. K-12 substr. MG1655 945515 NP_415419.2 CDS ycaM NC_000913.3 947229 948659 D putative transporter 947229..948659 Escherichia coli str. K-12 substr. MG1655 945518 NP_415420.1 CDS ycaN NC_000913.3 948660 949568 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(948660..949568) Escherichia coli str. K-12 substr. MG1655 945523 NP_415421.1 CDS ycaK NC_000913.3 949668 950258 D putative NAD(P)H-dependent oxidoreductase 949668..950258 Escherichia coli str. K-12 substr. MG1655 945520 NP_415422.1 CDS pflA NC_000913.3 950340 951080 R [formate-C-acetyltransferase 1]-activating enzyme; pyruvate formate-lyase 1-activating enzyme complement(950340..951080) Escherichia coli str. K-12 substr. MG1655 945517 NP_415423.1 CDS pflB NC_000913.3 951272 953554 R formate acetyltransferase 1; formate C-acetyltransferase 1, anaerobic; pyruvate formate-lyase 1 complement(951272..953554) Escherichia coli str. K-12 substr. MG1655 945514 NP_415424.1 CDS focA NC_000913.3 953609 954466 R probable formate transporter (formate channel 1); formate channel complement(953609..954466) Escherichia coli str. K-12 substr. MG1655 945513 NP_415425.4 CDS ycaO NC_000913.3 954872 956632 R ribosomal protein S12 methylthiotransferase accessory factor complement(954872..956632) Escherichia coli str. K-12 substr. MG1655 945509 NP_415426.1 CDS ycaP NC_000913.3 956762 957454 D UPF0702 family putative inner membrane protein 956762..957454 Escherichia coli str. K-12 substr. MG1655 945525 NP_415427.1 CDS serC NC_000913.3 957653 958741 D 3-phosphoserine aminotransferase; 3-phosphoserine/phosphohydroxythreonine aminotransferase 957653..958741 Escherichia coli str. K-12 substr. MG1655 945527 NP_415428.1 CDS aroA NC_000913.3 958812 960095 D 5-enolpyruvylshikimate-3-phosphate synthetase 958812..960095 Escherichia coli str. K-12 substr. MG1655 945528 NP_415429.2 CDS ycaL NC_000913.3 960264 961028 D putative heat shock protein; putative peptidase-related chaperone 960264..961028 Escherichia coli str. K-12 substr. MG1655 945534 NP_415430.1 CDS cmk NC_000913.3 961201 961884 D cytidylate kinase 961201..961884 Escherichia coli str. K-12 substr. MG1655 945535 NP_415431.1 CDS rpsA NC_000913.3 961995 963668 D 30S ribosomal subunit protein S1 961995..963668 Escherichia coli str. K-12 substr. MG1655 945536 NP_415432.1 CDS ihfB NC_000913.3 963828 964112 D integration host factor (IHF), beta subunit; site-specific recombination; integration host factor (IHF), DNA-binding protein, beta subunit 963828..964112 Escherichia coli str. K-12 substr. MG1655 945533 NP_415433.4 CDS ycaI NC_000913.3 964320 966584 D ComEC family inner membrane protein 964320..966584 Escherichia coli str. K-12 substr. MG1655 945531 NP_415434.1 CDS msbA NC_000913.3 966621 968369 D ATP-binding transport protein; multicopy suppressor of htrB; fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component 966621..968369 Escherichia coli str. K-12 substr. MG1655 945530 NP_415435.1 CDS lpxK NC_000913.3 968366 969352 D lipid A 4'kinase 968366..969352 Escherichia coli str. K-12 substr. MG1655 945526 NP_415436.1 CDS ycaQ NC_000913.3 969389 970621 D DUF1006 family protein with C-terminal wHTH domain 969389..970621 Escherichia coli str. K-12 substr. MG1655 945524 NP_415437.1 CDS ycaR NC_000913.3 970673 970855 D peroxide and acid resistance protein, UPF0434 family 970673..970855 Escherichia coli str. K-12 substr. MG1655 945537 NP_415438.1 CDS kdsB NC_000913.3 970852 971598 D CTP:CMP-3-deoxy-D-manno-octulosonate transferase; 3-deoxy-manno-octulosonate cytidylyltransferase 970852..971598 Escherichia coli str. K-12 substr. MG1655 945539 NP_415439.1 CDS ycbJ NC_000913.3 971752 972645 D protein kinase-like domain protein 971752..972645 Escherichia coli str. K-12 substr. MG1655 945545 NP_415440.1 CDS ycbC NC_000913.3 972622 973401 R DUF218 superfamily protein complement(972622..973401) Escherichia coli str. K-12 substr. MG1655 945546 NP_415441.1 CDS smtA NC_000913.3 973537 974322 D S-adenosylmethionine-dependent methyltransferase; putative S-adenosyl-L-methionine-dependent methyltransferase 973537..974322 Escherichia coli str. K-12 substr. MG1655 945547 NP_415442.1 CDS mukF NC_000913.3 974319 975641 D mukF protein (killing factor KICB); chromosome condensin MukBEF, kleisin-like subunit, binds calcium 974319..975641 Escherichia coli str. K-12 substr. MG1655 945548 NP_415443.2 CDS mukE NC_000913.3 975622 976326 D chromosome condensin MukBEF, MukE localization factor 975622..976326 Escherichia coli str. K-12 substr. MG1655 945550 NP_415444.1 CDS mukB NC_000913.3 976326 980786 D kinesin-like cell division protein involved in chromosome partitioning; chromosome condensin MukBEF, ATPase and DNA-binding subunit 976326..980786 Escherichia coli str. K-12 substr. MG1655 945549 NP_415445.1 CDS ldtD NC_000913.3 981047 982894 D putative amidase; murein L,D-transpeptidase 981047..982894 Escherichia coli str. K-12 substr. MG1655 945541 NP_415446.1 CDS ycbK NC_000913.3 983075 983623 D M15A protease-related family periplasmic protein 983075..983623 Escherichia coli str. K-12 substr. MG1655 945538 NP_415447.1 CDS ycbL NC_000913.3 983650 984297 D putative metal-binding enzyme 983650..984297 Escherichia coli str. K-12 substr. MG1655 945551 NP_415448.1 CDS aspC NC_000913.3 984519 985709 R aspartate aminotransferase; aspartate aminotransferase, PLP-dependent complement(984519..985709) Escherichia coli str. K-12 substr. MG1655 945553 NP_415449.1 CDS ompF NC_000913.3 985894 986982 R outer membrane protein 1a (Ia;b;F); outer membrane porin 1a (Ia;b;F) complement(985894..986982) Escherichia coli str. K-12 substr. MG1655 945554 NP_415450.1 CDS asnS NC_000913.3 987585 988985 R asparagine tRNA synthetase; asparaginyl tRNA synthetase complement(987585..988985) Escherichia coli str. K-12 substr. MG1655 945555 NP_415451.1 CDS pncB NC_000913.3 989154 990356 R nicotinate phosphoribosyltransferase complement(989154..990356) Escherichia coli str. K-12 substr. MG1655 946648 NP_415452.1 CDS pepN NC_000913.3 990622 993234 D aminopeptidase N 990622..993234 Escherichia coli str. K-12 substr. MG1655 947253 NP_415453.1 CDS ssuB NC_000913.3 993277 994044 R ATP-binding component of ABC superfamily; alkanesulfonate transporter subunit complement(993277..994044) Escherichia coli str. K-12 substr. MG1655 947220 NP_415454.4 CDS ssuC NC_000913.3 994041 994832 R membrane component of ABC superfamily; putative alkanesulfonate transporter subunit complement(994041..994832) Escherichia coli str. K-12 substr. MG1655 947216 NP_415455.1 CDS ssuD NC_000913.3 994843 995988 R alkanesulfonate monooxygenase, FMNH(2)-dependent complement(994843..995988) Escherichia coli str. K-12 substr. MG1655 945557 NP_415456.4 CDS ssuA NC_000913.3 995985 996944 R periplasmic-binding component of ABC superfamily; aliphatic sulfonate binding protein, SsuABC ABC transporter complement(995985..996944) Escherichia coli str. K-12 substr. MG1655 945560 NP_415457.1 CDS ssuE NC_000913.3 996937 997512 R NAD(P)H-dependent FMN reductase complement(996937..997512) Escherichia coli str. K-12 substr. MG1655 945947 NP_415458.2 CDS elfA NC_000913.3 997868 998407 D putative fimbrial-like protein; laminin-binding fimbrin subunit 997868..998407 Escherichia coli str. K-12 substr. MG1655 948306 NP_415459.1 CDS elfD NC_000913.3 998490 999191 D putative periplasmic pilin chaperone 998490..999191 Escherichia coli str. K-12 substr. MG1655 946773 NP_415460.1 CDS elfC NC_000913.3 999216 1001816 D putative outer membrane fimbrial subunit export usher protein 999216..1001816 Escherichia coli str. K-12 substr. MG1655 946934 NP_415461.1 CDS elfG NC_000913.3 1001807 1002877 D putative fimbrial-like adhesin protein 1001807..1002877 Escherichia coli str. K-12 substr. MG1655 947185 NP_415462.1 CDS ycbU NC_000913.3 1002889 1003431 D putative fimbrial-like protein; putative fimbriae protein 1002889..1003431 Escherichia coli str. K-12 substr. MG1655 945561 NP_415463.2 CDS ycbV NC_000913.3 1003439 1003954 D putative fimbrial-like protein; putative fimbrial-like adhesin protein 1003439..1003954 Escherichia coli str. K-12 substr. MG1655 945562 NP_415464.4 CDS ycbF NC_000913.3 1003947 1004657 D putative periplasmic pilin chaperone 1003947..1004657 Escherichia coli str. K-12 substr. MG1655 945559 NP_415465.1 CDS pyrD NC_000913.3 1004768 1005778 D dihydro-orotate dehydrogenase; dihydro-orotate oxidase, FMN-linked 1004768..1005778 Escherichia coli str. K-12 substr. MG1655 945556 NP_415466.4 CDS zapC NC_000913.3 1005952 1006494 D FtsZ stabilizer 1005952..1006494 Escherichia coli str. K-12 substr. MG1655 945552 NP_415467.1 CDS ycbX NC_000913.3 1006491 1007600 R 6-N-hydroxylaminopurine detoxification oxidoreductase complement(1006491..1007600) Escherichia coli str. K-12 substr. MG1655 945563 NP_415468.1 CDS rlmL NC_000913.3 1007844 1009952 D putative oxidoreductase; fused 23S rRNA m(2)G2445 and m(7)G2069 methyltransferase, SAM-dependent 1007844..1009952 Escherichia coli str. K-12 substr. MG1655 945564 NP_415469.1 CDS uup NC_000913.3 1009964 1011871 D putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component 1009964..1011871 Escherichia coli str. K-12 substr. MG1655 945566 NP_415470.1 CDS pqiA NC_000913.3 1012001 1013254 D paraquat-inducible protein A; paraquat-inducible, SoxRS-regulated inner membrane protein 1012001..1013254 Escherichia coli str. K-12 substr. MG1655 944999 NP_415471.1 CDS pqiB NC_000913.3 1013259 1014899 D paraquat-inducible, SoxRS-regulated MCE domain protein 1013259..1014899 Escherichia coli str. K-12 substr. MG1655 945653 NP_415472.2 CDS pqiC NC_000913.3 1014896 1015459 D DUF330 family putative lipoprotein 1014896..1015459 Escherichia coli str. K-12 substr. MG1655 946972 NP_415473.1 CDS rmf NC_000913.3 1015715 1015882 D ribosome modulation factor 1015715..1015882 Escherichia coli str. K-12 substr. MG1655 945567 NP_415474.1 CDS fabA NC_000913.3 1015952 1016470 R beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase; beta-hydroxydecanoyl thioester dehydrase complement(1015952..1016470) Escherichia coli str. K-12 substr. MG1655 945568 NP_415475.1 CDS ycbZ NC_000913.3 1016539 1018299 R putative ATP-dependent protease; putative peptidase complement(1016539..1018299) Escherichia coli str. K-12 substr. MG1655 945569 NP_415476.1 CDS matP NC_000913.3 1018485 1018937 D putative dehydrogenase; Ter macrodomain organizer matS-binding protein 1018485..1018937 Escherichia coli str. K-12 substr. MG1655 945570 NP_415477.1 CDS ompA NC_000913.3 1019013 1020053 R outer membrane protein 3a (II*;G;d); outer membrane protein A (3a;II*;G;d) complement(1019013..1020053) Escherichia coli str. K-12 substr. MG1655 945571 NP_415478.1 CDS sulA NC_000913.3 1020410 1020919 R suppressor of lon; inhibits cell division and ftsZ ring formation; SOS cell division inhibitor complement(1020410..1020919) Escherichia coli str. K-12 substr. MG1655 947335 NP_415479.1 CDS sxy NC_000913.3 1021138 1021767 D CRP-S-dependent promoter expression factor 1021138..1021767 Escherichia coli str. K-12 substr. MG1655 946504 NP_415480.2 CDS yccS NC_000913.3 1021730 1023883 R putative transporter, FUSC superfamily inner membrane protein, tandem domains complement(1021730..1023883) Escherichia coli str. K-12 substr. MG1655 947001 NP_415481.1 CDS yccF NC_000913.3 1023902 1024348 R DUF307 family inner membrane protein complement(1023902..1024348) Escherichia coli str. K-12 substr. MG1655 945594 NP_415482.1 CDS helD NC_000913.3 1024471 1026525 D DNA helicase IV 1024471..1026525 Escherichia coli str. K-12 substr. MG1655 946227 NP_415483.2 CDS mgsA NC_000913.3 1026557 1027015 R methylglyoxal synthase complement(1026557..1027015) Escherichia coli str. K-12 substr. MG1655 945574 NP_415484.1 CDS yccT NC_000913.3 1027111 1027773 R UPF0319 family protein complement(1027111..1027773) Escherichia coli str. K-12 substr. MG1655 945577 NP_415485.4 CDS yccU NC_000913.3 1027946 1028359 D putative CoA-binding protein 1027946..1028359 Escherichia coli str. K-12 substr. MG1655 949008 NP_415486.4 CDS hspQ NC_000913.3 1028404 1028721 R heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein complement(1028404..1028721) Escherichia coli str. K-12 substr. MG1655 945578 NP_415487.4 CDS rlmI NC_000913.3 1028779 1029969 R putative oxidoreductase; 23S rRNA m(5)C1962 methyltransferase, SAM-dependent complement(1028779..1029969) Escherichia coli str. K-12 substr. MG1655 946691 NP_415488.1 CDS yccX NC_000913.3 1030064 1030342 D weak acylphosphatase 1030064..1030342 Escherichia coli str. K-12 substr. MG1655 945304 NP_415489.4 CDS tusE NC_000913.3 1030339 1030668 R putative sulfite reductase; mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase complement(1030339..1030668) Escherichia coli str. K-12 substr. MG1655 945023 NP_415490.1 CDS yccA NC_000913.3 1030759 1031418 R putative carrier/transport protein; HflBKC-binding inner membrane protein, UPF0005 family complement(1030759..1031418) Escherichia coli str. K-12 substr. MG1655 946016 NP_415491.1 CDS hyaA NC_000913.3 1032139 1033257 D hydrogenase-1 small subunit; hydrogenase 1, small subunit 1032139..1033257 Escherichia coli str. K-12 substr. MG1655 945579 NP_415492.1 CDS hyaB NC_000913.3 1033254 1035047 D hydrogenase-1 large subunit; hydrogenase 1, large subunit 1033254..1035047 Escherichia coli str. K-12 substr. MG1655 945580 NP_415493.1 CDS hyaC NC_000913.3 1035066 1035773 D probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; hydrogenase 1, b-type cytochrome subunit 1035066..1035773 Escherichia coli str. K-12 substr. MG1655 945581 NP_415494.1 CDS hyaD NC_000913.3 1035770 1036357 D processing of HyaA and HyaB proteins; hydrogenase 1 maturation protease 1035770..1036357 Escherichia coli str. K-12 substr. MG1655 945575 NP_415495.1 CDS hyaE NC_000913.3 1036354 1036752 D processing of HyaA and HyaB proteins; putative HyaA chaperone 1036354..1036752 Escherichia coli str. K-12 substr. MG1655 945573 NP_415496.1 CDS hyaF NC_000913.3 1036749 1037606 D nickel incorporation into hydrogenase-1 proteins; protein involved in nickel incorporation into hydrogenase-1 proteins 1036749..1037606 Escherichia coli str. K-12 substr. MG1655 945572 NP_415497.1 CDS cbdA NC_000913.3 1037740 1039284 D cytochrome bd-II oxidase, subunit I 1037740..1039284 Escherichia coli str. K-12 substr. MG1655 945585 NP_415498.1 CDS cbdB NC_000913.3 1039296 1040432 D probable third cytochrome oxidase, subunit II; cytochrome bd-II oxidase, subunit II 1039296..1040432 Escherichia coli str. K-12 substr. MG1655 947547 YP_001165313.1 CDS cbdX NC_000913.3 1040445 1040537 D putative cytochrome bd-II oxidase subunit 1040445..1040537 Escherichia coli str. K-12 substr. MG1655 948955 NP_415500.1 CDS appA NC_000913.3 1040617 1041915 D phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic; phosphoanhydride phosphorylase 1040617..1041915 Escherichia coli str. K-12 substr. MG1655 946206 NP_415501.1 CDS etk NC_000913.3 1042030 1044210 R tyrosine-protein kinase, role in O-antigen capsule formation complement(1042030..1044210) Escherichia coli str. K-12 substr. MG1655 947409 NP_415502.4 CDS etp NC_000913.3 1044230 1044676 R putative phosphatase; Protein-tyrosine-phosphatase, role in O-antigen capsule formation; dephosphorylates Etk-P complement(1044230..1044676) Escherichia coli str. K-12 substr. MG1655 945236 NP_415503.1 CDS gfcE NC_000913.3 1044664 1045803 R putative function in exopolysaccharide production; putative O-antigen capsule outer membrane auxillary protein export channel complement(1044664..1045803) Escherichia coli str. K-12 substr. MG1655 945586 NP_415504.1 CDS gfcD NC_000913.3 1045849 1047945 R putative O-antigen capsule production periplasmic protein complement(1045849..1047945) Escherichia coli str. K-12 substr. MG1655 945588 NP_415505.1 CDS gfcC NC_000913.3 1047945 1048691 R putative O-antigen capsule production periplasmic protein complement(1047945..1048691) Escherichia coli str. K-12 substr. MG1655 944978 NP_415506.1 CDS gfcB NC_000913.3 1048688 1049332 R putative regulator; O-antigen capsule production lipoprotein complement(1048688..1049332) Escherichia coli str. K-12 substr. MG1655 949118 NP_415507.2 CDS gfcA NC_000913.3 1049439 1049744 R O-antigen capsule production threonine-rich inner membrane protein complement(1049439..1049744) Escherichia coli str. K-12 substr. MG1655 945029 YP_588445.1 CDS insA NC_000913.3 1049833 1050108 D IS1 repressor TnpA 1049833..1050108 Escherichia coli str. K-12 substr. MG1655 1450250 NP_415508.1 CDS insB1 NC_000913.3 1050027 1050530 D IS1 transposase B 1050027..1050530 Escherichia coli str. K-12 substr. MG1655 945009 NP_415509.1 CDS cspH NC_000913.3 1050963 1051175 R cold shock-like protein; stress protein, member of the CspA-family complement(1050963..1051175) Escherichia coli str. K-12 substr. MG1655 945590 NP_415510.1 CDS cspG NC_000913.3 1051461 1051673 D homolog of Salmonella cold shock protein; cold shock protein homolog, cold-inducible 1051461..1051673 Escherichia coli str. K-12 substr. MG1655 945591 NP_415511.1 CDS ymcE NC_000913.3 1051847 1052077 D suppresses fabA and ts growth mutation; cold shock gene 1051847..1052077 Escherichia coli str. K-12 substr. MG1655 946951 YP_588446.1 CDS gnsA NC_000913.3 1052067 1052240 D putative phosphatidylethanolamine synthesis regulator 1052067..1052240 Escherichia coli str. K-12 substr. MG1655 1450249 NP_415512.1 CDS yccM NC_000913.3 1052289 1053362 R putative 4Fe-4S membrane protein complement(1052289..1053362) Escherichia coli str. K-12 substr. MG1655 946295 NP_415513.2 CDS torS NC_000913.3 1053434 1056178 R hybrid sensory histidine kinase in two-component regulatory system with TorR complement(1053434..1056178) Escherichia coli str. K-12 substr. MG1655 945595 NP_415514.1 CDS torT NC_000913.3 1056261 1057289 D part of regulation of tor operon, periplasmic; periplasmic sensory protein associated with the TorRS two-component regulatory system 1056261..1057289 Escherichia coli str. K-12 substr. MG1655 946289 NP_415515.1 CDS torR NC_000913.3 1057262 1057954 R response transcriptional regulator for torA (sensor TorS); response regulator in two-component regulatory system with TorS complement(1057262..1057954) Escherichia coli str. K-12 substr. MG1655 946182 NP_415516.1 CDS torC NC_000913.3 1058084 1059256 D trimethylamine N-oxide reductase, cytochrome c-type subunit; trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit 1058084..1059256 Escherichia coli str. K-12 substr. MG1655 946252 NP_415517.1 CDS torA NC_000913.3 1059256 1061802 D trimethylamine N-oxide reductase subunit; trimethylamine N-oxide (TMAO) reductase I, catalytic subunit 1059256..1061802 Escherichia coli str. K-12 substr. MG1655 946267 NP_415518.1 CDS torD NC_000913.3 1061799 1062398 D part of trimethylamine-N-oxide oxidoreductase; TorA-maturation chaperone 1061799..1062398 Escherichia coli str. K-12 substr. MG1655 945625 NP_415519.1 CDS cbpM NC_000913.3 1062550 1062855 R modulator of CbpA co-chaperone complement(1062550..1062855) Escherichia coli str. K-12 substr. MG1655 945597 NP_415520.1 CDS cbpA NC_000913.3 1062855 1063775 R curved DNA-binding protein; functions closely related to DnaJ; DnaK co-chaperone; curved DNA-binding protein complement(1062855..1063775) Escherichia coli str. K-12 substr. MG1655 947572 NP_415521.1 CDS yccE NC_000913.3 1064036 1065292 D uncharacterized protein 1064036..1065292 Escherichia coli str. K-12 substr. MG1655 947468 NP_415522.1 CDS agp NC_000913.3 1065585 1066826 D periplasmic glucose-1-phosphatase; glucose-1-phosphatase/inositol phosphatase 1065585..1066826 Escherichia coli str. K-12 substr. MG1655 945773 NP_415523.1 CDS yccJ NC_000913.3 1066864 1067091 R uncharacterized protein complement(1066864..1067091) Escherichia coli str. K-12 substr. MG1655 948930 NP_415524.1 CDS wrbA NC_000913.3 1067112 1067708 R flavoprotein WrbA (Trp repressor binding protein); NAD(P)H:quinone oxidoreductase complement(1067112..1067708) Escherichia coli str. K-12 substr. MG1655 947263 NP_415525.2 CDS ymdF NC_000913.3 1068081 1068254 D KGG family protein 1068081..1068254 Escherichia coli str. K-12 substr. MG1655 945598 NP_415526.4 CDS rutG NC_000913.3 1068511 1069839 R putative transport protein; pyrimidine permease complement(1068511..1069839) Escherichia coli str. K-12 substr. MG1655 946589 NP_415527.4 CDS rutF NC_000913.3 1069860 1070354 R flavin:NADH reductase complement(1069860..1070354) Escherichia coli str. K-12 substr. MG1655 946594 NP_415528.1 CDS rutE NC_000913.3 1070365 1070955 R putative malonic semialdehyde reductase complement(1070365..1070955) Escherichia coli str. K-12 substr. MG1655 946591 NP_415529.1 CDS rutD NC_000913.3 1070965 1071765 R putative aminoacrylate hydrolase, reactive intermediate detoxification complement(1070965..1071765) Escherichia coli str. K-12 substr. MG1655 946586 NP_415530.1 CDS rutC NC_000913.3 1071773 1072159 R putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity complement(1071773..1072159) Escherichia coli str. K-12 substr. MG1655 945599 NP_415531.2 CDS rutB NC_000913.3 1072171 1072863 R ureidoacrylate amidohydrolase complement(1072171..1072863) Escherichia coli str. K-12 substr. MG1655 945699 NP_415532.3 CDS rutA NC_000913.3 1072863 1074011 R pyrimidine oxygenase, FMN-dependent complement(1072863..1074011) Escherichia coli str. K-12 substr. MG1655 945643 NP_415533.1 CDS rutR NC_000913.3 1074242 1074880 D hypothetical transcriptional regulator; rut operon transcriptional repressor for 1074242..1074880 Escherichia coli str. K-12 substr. MG1655 945075 NP_415534.1 CDS putA NC_000913.3 1074920 1078882 R proline dehydrogenase, P5C dehydrogenase; fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(1074920..1078882) Escherichia coli str. K-12 substr. MG1655 945600 NP_415535.1 CDS putP NC_000913.3 1079305 1080813 D major sodium/proline symporter; proline:sodium symporter 1079305..1080813 Escherichia coli str. K-12 substr. MG1655 945602 b4490 CDS efeU NC_000913.3 1081356 1082185 D ferrous iron permease (pseudogene); join(1081356..1081460,1081460..1082185) Escherichia coli str. K-12 substr. MG1655 948956 NP_415537.1 CDS efeO NC_000913.3 1082243 1083370 D inactive ferrous ion transporter EfeUOB 1082243..1083370 Escherichia coli str. K-12 substr. MG1655 945603 NP_415538.1 CDS efeB NC_000913.3 1083376 1084647 D deferrrochelatase, periplasmic 1083376..1084647 Escherichia coli str. K-12 substr. MG1655 946500 NP_415539.1 CDS phoH NC_000913.3 1084992 1086056 D PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation; ATP-binding protein; putative PhoH family P-loop ATPase 1084992..1086056 Escherichia coli str. K-12 substr. MG1655 948010 NP_415540.1 CDS pgaD NC_000913.3 1086106 1086519 R biofilm PGA synthase PgaCD, regulatory subunit; c-di-GMP-stimulated activity and dimerization complement(1086106..1086519) Escherichia coli str. K-12 substr. MG1655 947503 NP_415541.1 CDS pgaC NC_000913.3 1086521 1087846 R biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase; c-di-GMP-stimulated activity and dimerization complement(1086521..1087846) Escherichia coli str. K-12 substr. MG1655 945606 NP_415542.1 CDS pgaB NC_000913.3 1087839 1089857 R poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein complement(1087839..1089857) Escherichia coli str. K-12 substr. MG1655 945604 NP_415543.1 CDS pgaA NC_000913.3 1089866 1092289 R putative outer membrane protein; biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein complement(1089866..1092289) Escherichia coli str. K-12 substr. MG1655 945596 NP_415544.1 CDS ycdT NC_000913.3 1092876 1094234 D diguanylate cyclase, membrane-anchored 1092876..1094234 Escherichia coli str. K-12 substr. MG1655 945593 NP_415545.1 CDS insF1 NC_000913.3 1094275 1095141 R IS3 transposase B complement(1094275..1095141) Escherichia coli str. K-12 substr. MG1655 945587 NP_415546.2 CDS insE1 NC_000913.3 1095138 1095437 R IS3 transposase A complement(1095138..1095437) Escherichia coli str. K-12 substr. MG1655 945584 b1028 CDS ymdE NC_000913.3 1095505 1095846 D pseudogene; 1095505..1095846 Escherichia coli str. K-12 substr. MG1655 945589 NP_415548.1 CDS ycdU NC_000913.3 1095843 1096829 D putative inner membrane protein 1095843..1096829 Escherichia coli str. K-12 substr. MG1655 945592 NP_415551.2 CDS ghrA NC_000913.3 1097886 1098824 D putative dehydrogenase; glyoxylate/hydroxypyruvate reductase A 1097886..1098824 Escherichia coli str. K-12 substr. MG1655 946431 NP_415552.1 CDS ycdX NC_000913.3 1098879 1099616 D alkaline phosphatase 1098879..1099616 Escherichia coli str. K-12 substr. MG1655 948477 NP_415553.1 CDS ycdY NC_000913.3 1099640 1100194 D putative oxidoreductase component; redox enzyme maturation protein (REMP) chaperone for YcdX 1099640..1100194 Escherichia coli str. K-12 substr. MG1655 945609 NP_415554.4 CDS ycdZ NC_000913.3 1100296 1100787 D DUF1097 family inner membrane protein 1100296..1100787 Escherichia coli str. K-12 substr. MG1655 945617 NP_415555.1 CDS csgG NC_000913.3 1100851 1101684 R curli production assembly/transport component, 2nd curli operon; curli production assembly/transport outer membrane lipoprotein complement(1100851..1101684) Escherichia coli str. K-12 substr. MG1655 945619 NP_415556.1 CDS csgF NC_000913.3 1101711 1102127 R curli production assembly/transport component, 2nd curli operon; curli nucleation outer membrane protein complement(1101711..1102127) Escherichia coli str. K-12 substr. MG1655 945622 NP_415557.1 CDS csgE NC_000913.3 1102152 1102541 R curli production assembly/transport component, 2nd curli operon; curlin secretion specificity factor complement(1102152..1102541) Escherichia coli str. K-12 substr. MG1655 945711 NP_415558.1 CDS csgD NC_000913.3 1102546 1103196 R putative 2-component transcriptional regulator for 2nd curli operon; csgBAC operon transcriptional regulator complement(1102546..1103196) Escherichia coli str. K-12 substr. MG1655 949119 NP_415559.1 CDS csgB NC_000913.3 1103951 1104406 D minor curlin subunit precursor, similar ro CsgA; curlin nucleator protein, minor subunit in curli complex 1103951..1104406 Escherichia coli str. K-12 substr. MG1655 947391 NP_415560.1 CDS csgA NC_000913.3 1104447 1104902 D curlin major subunit, coiled surface structures; cryptic; curlin subunit, amyloid curli fibers, cryptic 1104447..1104902 Escherichia coli str. K-12 substr. MG1655 949055 NP_415561.1 CDS csgC NC_000913.3 1104961 1105293 D putative curli production protein; curli assembly protein 1104961..1105293 Escherichia coli str. K-12 substr. MG1655 945623 NP_415562.1 CDS ymdA NC_000913.3 1105414 1105725 D uncharacterized protein 1105414..1105725 Escherichia coli str. K-12 substr. MG1655 949012 NP_415563.1 CDS ymdB NC_000913.3 1105820 1106353 D putative polyprotein; O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit 1105820..1106353 Escherichia coli str. K-12 substr. MG1655 946987 NP_415564.2 CDS clsC NC_000913.3 1106355 1107776 D putative synthase; stationary phase cardiolipin synthase 3 1106355..1107776 Escherichia coli str. K-12 substr. MG1655 947321 NP_415565.1 CDS opgC NC_000913.3 1107784 1108941 R osmoregulated periplasmic glucan succinylation membrane protein complement(1107784..1108941) Escherichia coli str. K-12 substr. MG1655 946944 NP_415566.1 CDS opgG NC_000913.3 1109335 1110870 D periplasmic glucans biosynthesis protein; osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein 1109335..1110870 Escherichia coli str. K-12 substr. MG1655 945005 NP_415567.1 CDS opgH NC_000913.3 1110863 1113406 D membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO); membrane glycosyltransferase; nutrient-dependent cell size regulator, FtsZ assembly antagonist 1110863..1113406 Escherichia coli str. K-12 substr. MG1655 945624 NP_415568.1 CDS yceK NC_000913.3 1113579 1113806 D outer membrane integrity lipoprotein 1113579..1113806 Escherichia coli str. K-12 substr. MG1655 945613 NP_415569.4 CDS msyB NC_000913.3 1113807 1114181 R acidic protein suppresses mutants lacking function of protein export; multicopy suppressor of secY and secA complement(1113807..1114181) Escherichia coli str. K-12 substr. MG1655 945612 NP_415571.1 CDS mdtG NC_000913.3 1114264 1115490 R putative transport protein; putative drug efflux system protein complement(1114264..1115490) Escherichia coli str. K-12 substr. MG1655 945627 NP_415572.1 CDS lpxL NC_000913.3 1115662 1116582 R heat shock protein; lauryl-acyl carrier protein (ACP)-dependent acyltransferase complement(1115662..1116582) Escherichia coli str. K-12 substr. MG1655 946216 NP_415573.1 CDS yceA NC_000913.3 1116807 1117859 D putative rhodanese-related sulfurtransferase 1116807..1117859 Escherichia coli str. K-12 substr. MG1655 945601 NP_415574.1 CDS yceI NC_000913.3 1117901 1118476 R secreted protein complement(1117901..1118476) Escherichia coli str. K-12 substr. MG1655 946145 NP_415575.1 CDS yceJ NC_000913.3 1118480 1119046 R putative cytochrome b561 complement(1118480..1119046) Escherichia coli str. K-12 substr. MG1655 945628 NP_415576.1 CDS yceO NC_000913.3 1119307 1119447 R uncharacterized protein complement(1119307..1119447) Escherichia coli str. K-12 substr. MG1655 945629 NP_415577.1 CDS solA NC_000913.3 1119468 1120586 R sarcosine oxidase-like protein; N-methyltryptophan oxidase, FAD-binding complement(1119468..1120586) Escherichia coli str. K-12 substr. MG1655 944983 NP_415578.3 CDS bssS NC_000913.3 1120701 1120955 R biofilm regulator complement(1120701..1120955) Escherichia coli str. K-12 substr. MG1655 946104 NP_415579.1 CDS dinI NC_000913.3 1121242 1121487 R damage-inducible protein I; DNA damage-inducible protein I complement(1121242..1121487) Escherichia coli str. K-12 substr. MG1655 945022 NP_415580.1 CDS pyrC NC_000913.3 1121561 1122607 R dihydro-orotase complement(1121561..1122607) Escherichia coli str. K-12 substr. MG1655 945787 NP_415581.1 CDS yceB NC_000913.3 1122713 1123273 R lipoprotein, DUF1439 family complement(1122713..1123273) Escherichia coli str. K-12 substr. MG1655 947377 NP_415582.1 CDS grxB NC_000913.3 1123407 1124054 R glutaredoxin 2; glutaredoxin 2 (Grx2) complement(1123407..1124054) Escherichia coli str. K-12 substr. MG1655 946926 NP_415583.4 CDS mdtH NC_000913.3 1124118 1125326 R multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin complement(1124118..1125326) Escherichia coli str. K-12 substr. MG1655 946920 NP_415584.1 CDS rimJ NC_000913.3 1125562 1126146 D acetylation of N-terminal alanine of 30S ribosomal subunit protein S5; ribosomal-protein-S5-alanine N-acetyltransferase 1125562..1126146 Escherichia coli str. K-12 substr. MG1655 946910 NP_415585.1 CDS yceH NC_000913.3 1126157 1126804 D UPF0502 family protein 1126157..1126804 Escherichia coli str. K-12 substr. MG1655 945633 NP_415586.1 CDS yceM NC_000913.3 1126806 1127729 D putative virulence factor; putative oxidoreductase 1126806..1127729 Escherichia coli str. K-12 substr. MG1655 945204 NP_415587.1 CDS murJ NC_000913.3 1127839 1129374 D putative virulence factor; putative peptidoglycan lipid II flippase 1127839..1129374 Escherichia coli str. K-12 substr. MG1655 945487 NP_415588.1 CDS flgN NC_000913.3 1129414 1129830 R protein of flagellar biosynthesis; export chaperone for FlgK and FlgL complement(1129414..1129830) Escherichia coli str. K-12 substr. MG1655 945634 NP_415589.1 CDS flgM NC_000913.3 1129835 1130128 R anti-FliA (anti-sigma) factor; also known as RflB protein; anti-sigma factor for FliA (sigma 28) complement(1129835..1130128) Escherichia coli str. K-12 substr. MG1655 946684 NP_415590.1 CDS flgA NC_000913.3 1130204 1130863 R flagellar biosynthesis; assembly of basal-body periplasmic P ring; assembly protein for flagellar basal-body periplasmic P ring complement(1130204..1130863) Escherichia coli str. K-12 substr. MG1655 946300 NP_415591.1 CDS flgB NC_000913.3 1131018 1131434 D flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1131018..1131434 Escherichia coli str. K-12 substr. MG1655 945678 NP_415592.1 CDS flgC NC_000913.3 1131438 1131842 D flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1131438..1131842 Escherichia coli str. K-12 substr. MG1655 946687 NP_415593.1 CDS flgD NC_000913.3 1131854 1132549 D flagellar biosynthesis, initiation of hook assembly; flagellar hook assembly protein 1131854..1132549 Escherichia coli str. K-12 substr. MG1655 945813 NP_415594.1 CDS flgE NC_000913.3 1132574 1133782 D flagellar biosynthesis, hook protein; flagellar hook protein 1132574..1133782 Escherichia coli str. K-12 substr. MG1655 945636 NP_415595.1 CDS flgF NC_000913.3 1133802 1134557 D flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1133802..1134557 Escherichia coli str. K-12 substr. MG1655 945639 NP_415596.1 CDS flgG NC_000913.3 1134729 1135511 D flagellar biosynthesis, cell-distal portion of basal-body rod; flagellar component of cell-distal portion of basal-body rod 1134729..1135511 Escherichia coli str. K-12 substr. MG1655 945647 NP_415597.1 CDS flgH NC_000913.3 1135564 1136262 D flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein; flagellar protein of basal-body outer-membrane L ring 1135564..1136262 Escherichia coli str. K-12 substr. MG1655 946996 NP_415598.3 CDS flgI NC_000913.3 1136274 1137371 D homolog of Salmonella P-ring of flagella basal body; putative flagellar basal body protein 1136274..1137371 Escherichia coli str. K-12 substr. MG1655 947534 NP_415599.1 CDS flgJ NC_000913.3 1137371 1138312 D flagellar biosynthesis; flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase 1137371..1138312 Escherichia coli str. K-12 substr. MG1655 947456 NP_415600.1 CDS flgK NC_000913.3 1138378 1140021 D flagellar biosynthesis, hook-filament junction protein 1; flagellar hook-filament junction protein 1 1138378..1140021 Escherichia coli str. K-12 substr. MG1655 945648 NP_415601.1 CDS flgL NC_000913.3 1140033 1140986 D flagellar biosynthesis; hook-filament junction protein; flagellar hook-filament junction protein 1140033..1140986 Escherichia coli str. K-12 substr. MG1655 945646 NP_415602.1 CDS rne NC_000913.3 1141182 1144367 R RNase E, membrane attachment, mRNA turnover, maturation 5S RNA; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein complement(1141182..1144367) Escherichia coli str. K-12 substr. MG1655 945641 NP_415603.2 CDS yceQ NC_000913.3 1144502 1144822 D uncharacterized protein 1144502..1144822 Escherichia coli str. K-12 substr. MG1655 945640 NP_415604.1 CDS rluC NC_000913.3 1144940 1145899 D 23S rRNA pseudouridine(955,2504,2580) synthase 1144940..1145899 Escherichia coli str. K-12 substr. MG1655 945637 NP_415605.2 CDS yceF NC_000913.3 1146011 1146595 R Maf-like protein complement(1146011..1146595) Escherichia coli str. K-12 substr. MG1655 945631 NP_415606.1 CDS yceD NC_000913.3 1146794 1147315 D DUF177 family protein 1146794..1147315 Escherichia coli str. K-12 substr. MG1655 945650 NP_415607.1 CDS rpmF NC_000913.3 1147367 1147540 D 50S ribosomal subunit protein L32 1147367..1147540 Escherichia coli str. K-12 substr. MG1655 945657 NP_415608.2 CDS plsX NC_000913.3 1147621 1148691 D glycerolphosphate auxotrophy in plsB background; putative phosphate acyltransferase 1147621..1148691 Escherichia coli str. K-12 substr. MG1655 946165 NP_415609.1 CDS fabH NC_000913.3 1148759 1149712 D 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase; 3-oxoacyl-[acyl-carrier-protein] synthase III 1148759..1149712 Escherichia coli str. K-12 substr. MG1655 946003 NP_415610.1 CDS fabD NC_000913.3 1149728 1150657 D malonyl-CoA-[acyl-carrier-protein] transacylase 1149728..1150657 Escherichia coli str. K-12 substr. MG1655 945766 NP_415611.1 CDS fabG NC_000913.3 1150670 1151404 D 3-oxoacyl-[acyl-carrier-protein] reductase 1150670..1151404 Escherichia coli str. K-12 substr. MG1655 945645 NP_415612.1 CDS acpP NC_000913.3 1151615 1151851 D acyl carrier protein; acyl carrier protein (ACP) 1151615..1151851 Escherichia coli str. K-12 substr. MG1655 944805 NP_415613.1 CDS fabF NC_000913.3 1151939 1153180 D 3-oxoacyl-[acyl-carrier-protein] synthase II 1151939..1153180 Escherichia coli str. K-12 substr. MG1655 946665 NP_415614.1 CDS pabC NC_000913.3 1153300 1154109 D 4-amino-4-deoxychorismate lyase; 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex 1153300..1154109 Escherichia coli str. K-12 substr. MG1655 946647 NP_415615.1 CDS yceG NC_000913.3 1154112 1155134 D putative thymidylate kinase; septation protein, ampicillin sensitivity 1154112..1155134 Escherichia coli str. K-12 substr. MG1655 945660 NP_415616.1 CDS tmk NC_000913.3 1155124 1155765 D thymidylate kinase 1155124..1155765 Escherichia coli str. K-12 substr. MG1655 945663 NP_415617.1 CDS holB NC_000913.3 1155762 1156766 D DNA polymerase III, delta prime subunit 1155762..1156766 Escherichia coli str. K-12 substr. MG1655 945661 NP_415618.1 CDS ycfH NC_000913.3 1156777 1157574 D putative DNase 1156777..1157574 Escherichia coli str. K-12 substr. MG1655 945656 NP_415619.1 CDS ptsG NC_000913.3 1157869 1159302 D PTS system, glucose-specific IIBC component; fused glucose-specific PTS enzymes: IIB component/IIC component 1157869..1159302 Escherichia coli str. K-12 substr. MG1655 945651 NP_415620.1 CDS fhuE NC_000913.3 1159362 1161551 R outer membrane receptor for ferric iron uptake; ferric-rhodotorulic acid outer membrane transporter complement(1159362..1161551) Escherichia coli str. K-12 substr. MG1655 945649 NP_415621.3 CDS hinT NC_000913.3 1161885 1162244 D purine nucleoside phosphoramidase, dadA activator protein 1161885..1162244 Escherichia coli str. K-12 substr. MG1655 948549 NP_415622.1 CDS ycfL NC_000913.3 1162247 1162624 D uncharacterized protein 1162247..1162624 Escherichia coli str. K-12 substr. MG1655 948539 NP_415623.1 CDS lpoB NC_000913.3 1162638 1163279 D OM lipoprotein stimulator of MrcB transpeptidase 1162638..1163279 Escherichia coli str. K-12 substr. MG1655 948536 NP_415624.1 CDS thiK NC_000913.3 1163260 1164084 D putative beta-glucosidase; thiamine kinase 1163260..1164084 Escherichia coli str. K-12 substr. MG1655 948525 NP_415625.1 CDS nagZ NC_000913.3 1164095 1165120 D beta N-acetyl-glucosaminidase 1164095..1165120 Escherichia coli str. K-12 substr. MG1655 945671 NP_415626.4 CDS ycfP NC_000913.3 1165143 1165685 D putative UPF0227 family esterase 1165143..1165685 Escherichia coli str. K-12 substr. MG1655 945676 NP_415627.1 CDS ndh NC_000913.3 1166085 1167389 D respiratory NADH dehydrogenase; respiratory NADH dehydrogenase 2/cupric reductase 1166085..1167389 Escherichia coli str. K-12 substr. MG1655 946792 NP_415628.1 CDS ycfJ NC_000913.3 1167599 1168138 D uncharacterized protein 1167599..1168138 Escherichia coli str. K-12 substr. MG1655 945977 NP_415629.4 CDS ycfQ NC_000913.3 1168200 1168832 R repressor for bhsA(ycfR) complement(1168200..1168832) Escherichia coli str. K-12 substr. MG1655 947425 NP_415630.1 CDS bhsA NC_000913.3 1169073 1169330 D biofilm, cell surface and signaling protein 1169073..1169330 Escherichia coli str. K-12 substr. MG1655 945492 NP_415631.1 CDS ldtC NC_000913.3 1169412 1170374 R L,D-transpeptidase linking Lpp to murein complement(1169412..1170374) Escherichia coli str. K-12 substr. MG1655 945666 NP_415632.1 CDS mfd NC_000913.3 1170518 1173964 R transcription-repair coupling factor; mutation frequency decline; transcription-repair coupling factor complement(1170518..1173964) Escherichia coli str. K-12 substr. MG1655 945681 NP_415633.1 CDS ycfT NC_000913.3 1174092 1175165 R inner membrane protein complement(1174092..1175165) Escherichia coli str. K-12 substr. MG1655 945679 NP_415634.1 CDS lolC NC_000913.3 1175427 1176626 D membrane component of ABC superfamily; lipoprotein-releasing system transmembrane protein 1175427..1176626 Escherichia coli str. K-12 substr. MG1655 945673 NP_415635.4 CDS lolD NC_000913.3 1176619 1177320 D putative ATP-binding component of a transport system; outer membrane-specific lipoprotein transporter subunit 1176619..1177320 Escherichia coli str. K-12 substr. MG1655 945670 NP_415636.1 CDS lolE NC_000913.3 1177320 1178564 D putative kinase; membrane component of ABC superfamily; lipoprotein-releasing system transmembrane protein 1177320..1178564 Escherichia coli str. K-12 substr. MG1655 945665 NP_415637.1 CDS nagK NC_000913.3 1178593 1179504 D N-acetyl-D-glucosamine kinase 1178593..1179504 Escherichia coli str. K-12 substr. MG1655 945664 NP_415638.2 CDS cobB NC_000913.3 1179631 1180359 D putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase; deacetylase of acs and cheY, chemotaxis regulator 1179631..1180359 Escherichia coli str. K-12 substr. MG1655 945687 NP_415639.1 CDS ycfZ NC_000913.3 1180479 1181267 R inner membrane protein complement(1180479..1181267) Escherichia coli str. K-12 substr. MG1655 945685 NP_415640.2 CDS ymfA NC_000913.3 1181264 1181725 R DUF3592 family inner membrane protein complement(1181264..1181725) Escherichia coli str. K-12 substr. MG1655 945684 NP_415641.1 CDS potD NC_000913.3 1181783 1182829 R spermidine/putrescine periplasmic transport protein; periplasmic-binding component of ABC superfamily; polyamine transporter subunit complement(1181783..1182829) Escherichia coli str. K-12 substr. MG1655 945682 NP_415642.1 CDS potC NC_000913.3 1182826 1183620 R spermidine/putrescine transport system permease; membrane component of ABC superfamily; polyamine transporter subunit complement(1182826..1183620) Escherichia coli str. K-12 substr. MG1655 945691 NP_415643.3 CDS potB NC_000913.3 1183617 1184444 R spermidine/putrescine transport system permease; membrane component of ABC superfamily; polyamine transporter subunit complement(1183617..1184444) Escherichia coli str. K-12 substr. MG1655 945692 NP_415644.1 CDS potA NC_000913.3 1184458 1185594 R ATP-binding component of spermidine/putrescine transport; polyamine transporter subunit complement(1184458..1185594) Escherichia coli str. K-12 substr. MG1655 946323 NP_415645.1 CDS pepT NC_000913.3 1185844 1187070 D putative peptidase T; peptidase T 1185844..1187070 Escherichia coli str. K-12 substr. MG1655 946333 NP_415646.4 CDS roxA NC_000913.3 1187119 1188240 R 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase complement(1187119..1188240) Escherichia coli str. K-12 substr. MG1655 945391 NP_415647.1 CDS phoQ NC_000913.3 1188316 1189776 R sensor protein PhoQ; sensory histidine kinase in two-component regulatory system with PhoP complement(1188316..1189776) Escherichia coli str. K-12 substr. MG1655 946326 NP_415648.1 CDS phoP NC_000913.3 1189776 1190447 R transcriptional regulatory protein; response regulator in two-component regulatory system with PhoQ complement(1189776..1190447) Escherichia coli str. K-12 substr. MG1655 945697 NP_415649.1 CDS purB NC_000913.3 1190616 1191986 R adenylosuccinate lyase complement(1190616..1191986) Escherichia coli str. K-12 substr. MG1655 945695 NP_415650.1 CDS hflD NC_000913.3 1191990 1192631 R putative lysogenization regulator complement(1191990..1192631) Escherichia coli str. K-12 substr. MG1655 945693 NP_415651.4 CDS mnmA NC_000913.3 1192667 1193773 R tRNA(Gln,Lys,Glu) U34 2-thiouridylase, first step in mnm(5)-s(2)U34-tRNA synthesis complement(1192667..1193773) Escherichia coli str. K-12 substr. MG1655 945690 NP_415652.1 CDS nudJ NC_000913.3 1193827 1194288 R bifunctional thiamine pyrimidine pyrophosphate hydrolase/ thiamine pyrophosphate hydrolase complement(1193827..1194288) Escherichia coli str. K-12 substr. MG1655 945689 NP_415653.4 CDS rluE NC_000913.3 1194298 1194951 R 23S rRNA pseudouridine(2457) synthase complement(1194298..1194951) Escherichia coli str. K-12 substr. MG1655 945701 NP_415654.1 CDS icd NC_000913.3 1195123 1196373 D isocitrate dehydrogenase, specific for NADP+; e14 prophage; isocitrate dehydrogenase, specific for NADP+ 1195123..1196373 Escherichia coli str. K-12 substr. MG1655 945702 NP_415655.1 CDS ymfD NC_000913.3 1196867 1197532 R e14 prophage; putative SAM-dependent methyltransferase complement(1196867..1197532) Escherichia coli str. K-12 substr. MG1655 945329 NP_415656.1 CDS ymfE NC_000913.3 1197533 1198237 R e14 prophage; putative inner membrane protein complement(1197533..1198237) Escherichia coli str. K-12 substr. MG1655 946722 NP_415657.1 CDS lit NC_000913.3 1198695 1199588 D phage T4 late gene expression; at locus of e14 element; e14 prophage; cell death peptidase, inhibitor of T4 late gene expression 1198695..1199588 Escherichia coli str. K-12 substr. MG1655 948421 NP_415658.1 CDS intE NC_000913.3 1199679 1200806 R prophage e14 integrase; e14 prophage; putative integrase complement(1199679..1200806) Escherichia coli str. K-12 substr. MG1655 948034 NP_415659.1 CDS xisE NC_000913.3 1200787 1201032 R e14 prophage; putative excisionase complement(1200787..1201032) Escherichia coli str. K-12 substr. MG1655 945705 NP_415661.2 CDS ymfI NC_000913.3 1201497 1201838 D e14 prophage; uncharacterized protein 1201497..1201838 Escherichia coli str. K-12 substr. MG1655 945712 NP_415662.2 CDS ymfJ NC_000913.3 1201776 1202084 R e14 prophage; uncharacterized protein complement(1201776..1202084) Escherichia coli str. K-12 substr. MG1655 945718 NP_415663.1 CDS cohE NC_000913.3 1202259 1202933 R e14 prophage; repressor protein phage e14 complement(1202259..1202933) Escherichia coli str. K-12 substr. MG1655 945719 NP_415664.2 CDS croE NC_000913.3 1203024 1203224 D e14 prophage; putative DNA-binding transcriptional regulator 1203024..1203224 Escherichia coli str. K-12 substr. MG1655 945720 NP_415665.2 CDS ymfL NC_000913.3 1203268 1203825 D e14 prophage; putative DNA-binding transcriptional regulator 1203268..1203825 Escherichia coli str. K-12 substr. MG1655 945717 NP_415666.1 CDS ymfM NC_000913.3 1203822 1204160 D e14 prophage; uncharacterized protein 1203822..1204160 Escherichia coli str. K-12 substr. MG1655 945715 b4692 CDS oweE NC_000913.3 1204170 1204403 D pseudogene, lambda replication protein O homolog; CPS-53/KpLE1 prophage;Phage or Prophage Related; 1204170..1204403 Escherichia coli str. K-12 substr. MG1655 7751644 b4693 CDS aaaE NC_000913.3 1204404 1205537 D pseudogene, phage terminase protein A family, e14 prophage;Phage or Prophage Related; 1204404..1205537 Escherichia coli str. K-12 substr. MG1655 7751645 NP_415668.1 CDS ymfR NC_000913.3 1205549 1205731 D e14 prophage; uncharacterized protein 1205549..1205731 Escherichia coli str. K-12 substr. MG1655 945700 b1151 CDS beeE NC_000913.3 1205731 1206142 D pseudogene, portal protein family, e14 prophage;Phage or Prophage Related; 1205731..1206142 Escherichia coli str. K-12 substr. MG1655 945698 b1152 CDS jayE NC_000913.3 1206143 1206922 D pseudogene, e14 prophage;Phage or Prophage Related; 1206143..1206922 Escherichia coli str. K-12 substr. MG1655 945703 NP_415671.1 CDS ymfQ NC_000913.3 1206913 1207497 D prohage e14 tail protein homolog 1206913..1207497 Escherichia coli str. K-12 substr. MG1655 945707 NP_415672.1 CDS stfP NC_000913.3 1207501 1208130 D e14 prophage; uncharacterized protein 1207501..1208130 Escherichia coli str. K-12 substr. MG1655 945726 NP_415673.1 CDS tfaP NC_000913.3 1208132 1208545 D e14 prophage; uncharacterized protein 1208132..1208545 Escherichia coli str. K-12 substr. MG1655 945724 NP_415674.1 CDS tfaE NC_000913.3 1208517 1209119 R e14 prophage; putative tail fiber assembly protein complement(1208517..1209119) Escherichia coli str. K-12 substr. MG1655 945723 b1157 CDS stfE NC_000913.3 1209119 1209619 R pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related; complement(1209119..1209619) Escherichia coli str. K-12 substr. MG1655 945722 NP_415676.1 CDS pinE NC_000913.3 1209685 1210239 D inversion of adjacent DNA; at locus of e14 element; e14 prophage; site-specific DNA recombinase 1209685..1210239 Escherichia coli str. K-12 substr. MG1655 945721 NP_415677.1 CDS mcrA NC_000913.3 1210346 1211179 D restriction of DNA at 5-methylcytosine residues; at locus of e14 element; putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease; 5-methylcytosine DNA binding protein; e14 prophage gene 1210346..1211179 Escherichia coli str. K-12 substr. MG1655 945727 b4519 CDS icdC NC_000913.3 1211413 1211577 D pseudogene, isocitrate dehydrogenase C-terminal gene fragment; idcC' is a 54 codon 3' gene fragment created during e14 prophage insertion; 1211413..1211577 Escherichia coli str. K-12 substr. MG1655 4056026 NP_415678.1 CDS iraM NC_000913.3 1211680 1212003 R RpoS stabilzer during Mg starvation, anti-RssB factor complement(1211680..1212003) Escherichia coli str. K-12 substr. MG1655 945729 NP_415679.1 CDS ycgX NC_000913.3 1212703 1213107 R DUF1398 family protein complement(1212703..1213107) Escherichia coli str. K-12 substr. MG1655 945733 NP_415680.1 CDS bluR NC_000913.3 1213328 1214059 R putative transcriptional regulator; repressor of blue light-responsive genes complement(1213328..1214059) Escherichia coli str. K-12 substr. MG1655 945735 NP_415681.1 CDS bluF NC_000913.3 1214264 1215475 R anti-repressor for YcgE, blue light-responsive; FAD-binding; has c-di-GMP phosphodiesterase-like EAL domain, but does not degrade c-di-GMP complement(1214264..1215475) Escherichia coli str. K-12 substr. MG1655 947592 NP_415682.1 CDS ycgZ NC_000913.3 1215789 1216025 D RcsB connector protein for regulation of biofilm and acid-resistance 1215789..1216025 Escherichia coli str. K-12 substr. MG1655 945885 NP_415683.1 CDS ymgA NC_000913.3 1216068 1216340 D RcsB connector protein for regulation of biofilm 1216068..1216340 Escherichia coli str. K-12 substr. MG1655 948991 NP_415684.1 CDS ariR NC_000913.3 1216369 1216635 D RcsB connector protein for regulation of biofilm and acid-resistance 1216369..1216635 Escherichia coli str. K-12 substr. MG1655 945340 NP_415685.1 CDS ymgC NC_000913.3 1216748 1216996 D Blue light, low temperature and stress induced protein 1216748..1216996 Escherichia coli str. K-12 substr. MG1655 945090 NP_415686.2 CDS ycgG NC_000913.3 1217328 1218851 D putative proteases; putative membrane-anchored cyclic-di-GMP phosphodiesterase 1217328..1218851 Escherichia coli str. K-12 substr. MG1655 945738 YP_588447.1 CDS ymgF NC_000913.3 1218983 1219201 D inner membrane division septum protein 1218983..1219201 Escherichia coli str. K-12 substr. MG1655 1450253 b4491 CDS ycgH NC_000913.3 1219601 1222248 D pseudogene; putative ATP-binding component of a transport system; 1219601..1222248 Escherichia coli str. K-12 substr. MG1655 2847703 NP_415689.2 CDS ymgD NC_000913.3 1222305 1222634 R uncharacterized protein complement(1222305..1222634) Escherichia coli str. K-12 substr. MG1655 945732 NP_415690.5 CDS ymgG NC_000913.3 1222644 1222988 R UPF0757 family protein complement(1222644..1222988) Escherichia coli str. K-12 substr. MG1655 945728 YP_001165314.1 CDS ymgI NC_000913.3 1222990 1223163 R uncharacterized protein complement(1222990..1223163) Escherichia coli str. K-12 substr. MG1655 5061515 YP_001165315.1 CDS ymgJ NC_000913.3 1223264 1223449 D uncharacterized protein 1223264..1223449 Escherichia coli str. K-12 substr. MG1655 5061516 b4521 CDS ycgI NC_000913.3 1223564 1223907 D pseudogene; join(1223564..1223671,1223671..1223907) Escherichia coli str. K-12 substr. MG1655 1450255 NP_415692.1 CDS minE NC_000913.3 1224279 1224545 R cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation; cell division topological specificity factor complement(1224279..1224545) Escherichia coli str. K-12 substr. MG1655 945740 NP_415693.1 CDS minD NC_000913.3 1224549 1225361 R cell division inhibitor, a membrane ATPase, activates minC; membrane ATPase of the MinC-MinD-MinE system complement(1224549..1225361) Escherichia coli str. K-12 substr. MG1655 945741 NP_415694.1 CDS minC NC_000913.3 1225385 1226080 R cell division inhibitor, inhibits ftsZ ring formation; cell division inhibitor complement(1225385..1226080) Escherichia coli str. K-12 substr. MG1655 945744 NP_415695.1 CDS ycgJ NC_000913.3 1226600 1226968 D uncharacterized protein 1226600..1226968 Escherichia coli str. K-12 substr. MG1655 946155 NP_415696.1 CDS pliG NC_000913.3 1227071 1227472 R periplasmic inhibitor of g-type lysozyme complement(1227071..1227472) Escherichia coli str. K-12 substr. MG1655 946963 NP_415697.4 CDS ycgL NC_000913.3 1227714 1228007 D UPF0745 family protein 1227714..1228007 Escherichia coli str. K-12 substr. MG1655 946226 NP_415698.1 CDS ycgM NC_000913.3 1228079 1228738 D putative isomerase; putative isomerase/hydrolase 1228079..1228738 Escherichia coli str. K-12 substr. MG1655 946115 NP_415699.5 CDS ycgN NC_000913.3 1228815 1229276 D UPF0153 family cysteine cluster protein 1228815..1229276 Escherichia coli str. K-12 substr. MG1655 945804 NP_415700.4 CDS hlyE NC_000913.3 1229483 1230394 R hemolysin E complement(1229483..1230394) Escherichia coli str. K-12 substr. MG1655 945745 NP_415701.1 CDS umuD NC_000913.3 1230767 1231186 D SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC; DNA polymerase V, subunit D 1230767..1231186 Escherichia coli str. K-12 substr. MG1655 945746 NP_415702.1 CDS umuC NC_000913.3 1231186 1232454 D SOS mutagenesis and repair; DNA polymerase V, subunit C 1231186..1232454 Escherichia coli str. K-12 substr. MG1655 946359 NP_415703.3 CDS dsbB NC_000913.3 1232500 1233030 R reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella.; oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I complement(1232500..1233030) Escherichia coli str. K-12 substr. MG1655 946344 NP_415704.1 CDS nhaB NC_000913.3 1233176 1234717 R Na+/H+ antiporter, pH independent; sodium:proton antiporter complement(1233176..1234717) Escherichia coli str. K-12 substr. MG1655 944822 NP_415705.1 CDS fadR NC_000913.3 1234938 1235657 D negative regulator for fad regulon, and positive activator of fabA; fatty acid metabolism regulon transcriptional regulator 1234938..1235657 Escherichia coli str. K-12 substr. MG1655 948652 NP_415706.1 CDS ycgB NC_000913.3 1235709 1237241 R SpoVR family stationary phase protein complement(1235709..1237241) Escherichia coli str. K-12 substr. MG1655 946365 NP_415707.1 CDS dadA NC_000913.3 1237571 1238869 D D-amino acid dehydrogenase subunit; D-amino acid dehydrogenase 1237571..1238869 Escherichia coli str. K-12 substr. MG1655 945752 NP_415708.1 CDS dadX NC_000913.3 1238879 1239949 D alanine racemase 2, catabolic; alanine racemase, catabolic, PLP-binding 1238879..1239949 Escherichia coli str. K-12 substr. MG1655 945754 NP_415709.2 CDS cvrA NC_000913.3 1240335 1242071 R putative cation/proton antiporter complement(1240335..1242071) Escherichia coli str. K-12 substr. MG1655 945755 NP_415710.1 CDS ldcA NC_000913.3 1242166 1243080 R murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A complement(1242166..1243080) Escherichia coli str. K-12 substr. MG1655 945756 NP_415711.2 CDS emtA NC_000913.3 1243180 1243791 D murein transglycosylase E; lytic murein endotransglycosylase E 1243180..1243791 Escherichia coli str. K-12 substr. MG1655 945655 NP_415712.1 CDS ycgR NC_000913.3 1243793 1244527 R flagellar velocity braking protein, c-di-GMP-regulated complement(1243793..1244527) Escherichia coli str. K-12 substr. MG1655 947609 NP_415713.1 CDS ymgE NC_000913.3 1244728 1244982 D transglycosylase asociated protein; UPF0410 family putative inner membrane protein 1244728..1244982 Escherichia coli str. K-12 substr. MG1655 945760 NP_415714.1 CDS ycgY NC_000913.3 1245160 1245600 D uncharacterized protein 1245160..1245600 Escherichia coli str. K-12 substr. MG1655 945761 NP_415715.1 CDS treA NC_000913.3 1245679 1247376 R trehalase, periplasmic; periplasmic trehalase complement(1245679..1247376) Escherichia coli str. K-12 substr. MG1655 945757 NP_415716.4 CDS dhaM NC_000913.3 1247696 1249114 R PTS hybrid protein; putative dihydroxyacetone-specific PTS enzymes: HPr component/EI component complement(1247696..1249114) Escherichia coli str. K-12 substr. MG1655 945749 NP_415717.1 CDS dhaL NC_000913.3 1249125 1249757 R dihydroxyacetone kinase, C-terminal domain complement(1249125..1249757) Escherichia coli str. K-12 substr. MG1655 945748 NP_415718.6 CDS dhaK NC_000913.3 1249768 1250838 R dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit complement(1249768..1250838) Escherichia coli str. K-12 substr. MG1655 945747 NP_415719.2 CDS dhaR NC_000913.3 1251066 1252985 D dhaKLM operon transcription activator 1251066..1252985 Escherichia coli str. K-12 substr. MG1655 945743 NP_415720.1 CDS ycgV NC_000913.3 1253085 1255952 R putative adhesion and penetration protein; putative adhesin complement(1253085..1255952) Escherichia coli str. K-12 substr. MG1655 945767 NP_415721.1 CDS ychF NC_000913.3 1256721 1257812 R putative GTP-binding protein; catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated complement(1256721..1257812) Escherichia coli str. K-12 substr. MG1655 945769 NP_415722.1 CDS pth NC_000913.3 1257929 1258513 R peptidyl-tRNA hydrolase complement(1257929..1258513) Escherichia coli str. K-12 substr. MG1655 945765 NP_415723.1 CDS ychH NC_000913.3 1258791 1259069 D DUF2583 family putative inner membrane protein 1258791..1259069 Escherichia coli str. K-12 substr. MG1655 945762 NP_415724.2 CDS dauA NC_000913.3 1259124 1260803 R putative sulfate transporter; C4-dicarboxylic acid transporter complement(1259124..1260803) Escherichia coli str. K-12 substr. MG1655 945770 NP_415725.1 CDS prs NC_000913.3 1260928 1261875 R phosphoribosylpyrophosphate synthetase; phosphoribosylpyrophosphate synthase complement(1260928..1261875) Escherichia coli str. K-12 substr. MG1655 945772 NP_415726.1 CDS ispE NC_000913.3 1262026 1262877 R 4-diphosphocytidyl-2-C-methylerythritol kinase complement(1262026..1262877) Escherichia coli str. K-12 substr. MG1655 945774 NP_415727.1 CDS lolB NC_000913.3 1262877 1263500 R outer-membrane lipoprotein; lipoprotein localization factor complement(1262877..1263500) Escherichia coli str. K-12 substr. MG1655 945775 NP_415728.1 CDS hemA NC_000913.3 1263714 1264970 D glutamyl-tRNA reductase; glutamyl tRNA reductase 1263714..1264970 Escherichia coli str. K-12 substr. MG1655 945777 NP_415729.1 CDS prfA NC_000913.3 1265012 1266094 D peptide chain release factor RF-1 1265012..1266094 Escherichia coli str. K-12 substr. MG1655 949002 NP_415730.1 CDS prmC NC_000913.3 1266094 1266927 D possible protoporphyrinogen oxidase; N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 1266094..1266927 Escherichia coli str. K-12 substr. MG1655 945779 NP_415731.1 CDS ychQ NC_000913.3 1266924 1267316 D SIRB family inner membrane protein 1266924..1267316 Escherichia coli str. K-12 substr. MG1655 945781 NP_415732.1 CDS ychA NC_000913.3 1267320 1268129 D transglutaminase-like TPR-repeat protein 1267320..1268129 Escherichia coli str. K-12 substr. MG1655 945784 NP_415733.1 CDS kdsA NC_000913.3 1268165 1269019 D 2-dehydro-3-deoxyphosphooctulonate aldolase; 3-deoxy-D-manno-octulosonate 8-phosphate synthase 1268165..1269019 Escherichia coli str. K-12 substr. MG1655 945785 YP_025297.1 CDS ldrA NC_000913.3 1269168 1269275 R small toxic polypeptide; toxic polypeptide, small complement(1269168..1269275) Escherichia coli str. K-12 substr. MG1655 2847733 YP_025298.1 CDS ldrB NC_000913.3 1269703 1269810 R small toxic polypeptide; toxic polypeptide, small complement(1269703..1269810) Escherichia coli str. K-12 substr. MG1655 2847735 YP_025299.1 CDS ldrC NC_000913.3 1270238 1270345 R small toxic polypeptide; toxic polypeptide, small complement(1270238..1270345) Escherichia coli str. K-12 substr. MG1655 2847775 NP_415734.1 CDS chaA NC_000913.3 1270749 1271849 R sodium-calcium/proton antiporter; calcium/sodium:proton antiporter complement(1270749..1271849) Escherichia coli str. K-12 substr. MG1655 945790 NP_415735.1 CDS chaB NC_000913.3 1272119 1272349 D cation transport regulator 1272119..1272349 Escherichia coli str. K-12 substr. MG1655 945792 NP_415736.2 CDS chaC NC_000913.3 1272507 1273202 D cation transport regulator 1272507..1273202 Escherichia coli str. K-12 substr. MG1655 945793 NP_415737.1 CDS ychN NC_000913.3 1273246 1273599 R putative sulfur relay protein complement(1273246..1273599) Escherichia coli str. K-12 substr. MG1655 945794 NP_415738.2 CDS ychO NC_000913.3 1273784 1275178 D conserved protein, invasin-like; putative invasin 1273784..1275178 Escherichia coli str. K-12 substr. MG1655 945801 NP_415739.1 CDS narL NC_000913.3 1275179 1275829 R pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes; response regulator in two-component regulatory system with NarX (or NarQ) complement(1275179..1275829) Escherichia coli str. K-12 substr. MG1655 945795 NP_415740.1 CDS narX NC_000913.3 1275822 1277618 R nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator; sensory histidine kinase in two-component regulatory system with NarL complement(1275822..1277618) Escherichia coli str. K-12 substr. MG1655 945788 NP_415741.1 CDS narK NC_000913.3 1277957 1279348 D nitrite extrusion protein; nitrate/nitrite transporter 1277957..1279348 Escherichia coli str. K-12 substr. MG1655 945783 NP_415742.1 CDS narG NC_000913.3 1279864 1283607 D nitrate reductase 1, alpha subunit 1279864..1283607 Escherichia coli str. K-12 substr. MG1655 945782 NP_415743.1 CDS narH NC_000913.3 1283604 1285142 D nitrate reductase 1, beta subunit; nitrate reductase 1, beta (Fe-S) subunit 1283604..1285142 Escherichia coli str. K-12 substr. MG1655 945780 NP_415744.1 CDS narJ NC_000913.3 1285139 1285849 D nitrate reductase 1, delta subunit, assembly function; molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 1285139..1285849 Escherichia coli str. K-12 substr. MG1655 945807 NP_415745.1 CDS narI NC_000913.3 1285849 1286526 D nitrate reductase 1, cytochrome b(NR), gamma subunit; nitrate reductase 1, gamma (cytochrome b(NR)) subunit 1285849..1286526 Escherichia coli str. K-12 substr. MG1655 945808 NP_415747.2 CDS tpr NC_000913.3 1287087 1287176 R a protamine-like protein; protamine-like protein complement(1287087..1287176) Escherichia coli str. K-12 substr. MG1655 946224 NP_415748.1 CDS purU NC_000913.3 1287782 1288624 R formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesis; formyltetrahydrofolate hydrolase complement(1287782..1288624) Escherichia coli str. K-12 substr. MG1655 945827 NP_415749.1 CDS ychJ NC_000913.3 1288674 1289132 R UPF0225 family protein complement(1288674..1289132) Escherichia coli str. K-12 substr. MG1655 945828 NP_415750.2 CDS rssA NC_000913.3 1289245 1290150 D putative patatin-like family phospholipase 1289245..1290150 Escherichia coli str. K-12 substr. MG1655 945725 NP_415751.1 CDS rssB NC_000913.3 1290242 1291255 D Hnr protein; PcnB-degradosome interaction factor; response regulator 1290242..1291255 Escherichia coli str. K-12 substr. MG1655 945855 NP_415752.1 CDS galU NC_000913.3 1291457 1292365 D glucose-1-phosphate uridylyltransferase 1291457..1292365 Escherichia coli str. K-12 substr. MG1655 945730 NP_415753.1 CDS hns NC_000913.3 1292509 1292922 R DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator; global DNA-binding transcriptional dual regulator H-NS complement(1292509..1292922) Escherichia coli str. K-12 substr. MG1655 945829 NP_415754.1 CDS tdk NC_000913.3 1293527 1294144 D thymidine kinase; thymidine kinase/deoxyuridine kinase 1293527..1294144 Escherichia coli str. K-12 substr. MG1655 945834 b4573 CDS insZ NC_000913.3 1294426 1295322 R pseudogene, transposase homolog; complement(join(1294426..1294992,1294992..1295141,1295140..1295322)) Escherichia coli str. K-12 substr. MG1655 4056037 NP_415757.1 CDS adhE NC_000913.3 1295446 1298121 R CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase; fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase complement(1295446..1298121) Escherichia coli str. K-12 substr. MG1655 945837 NP_415758.1 CDS ychE NC_000913.3 1298598 1299245 D putative channel protein; UPF0056 family inner membrane protein 1298598..1299245 Escherichia coli str. K-12 substr. MG1655 945836 NP_415759.1 CDS oppA NC_000913.3 1301182 1302813 D oligopeptide transport; periplasmic binding protein; periplasmic-binding component of ABC superfamily; oligopeptide transporter subunit 1301182..1302813 Escherichia coli str. K-12 substr. MG1655 945830 NP_415760.1 CDS oppB NC_000913.3 1302899 1303819 D oligopeptide transport permease protein; membrane component of ABC superfamily; oligopeptide transporter subunit 1302899..1303819 Escherichia coli str. K-12 substr. MG1655 945823 NP_415761.1 CDS oppC NC_000913.3 1303834 1304742 D homolog of Salmonella oligopeptide transport permease protein; membrane component of ABC superfamily; oligopeptide transporter subunit 1303834..1304742 Escherichia coli str. K-12 substr. MG1655 945810 YP_025300.1 CDS oppD NC_000913.3 1304754 1305767 D homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; oligopeptide transporter subunit 1304754..1305767 Escherichia coli str. K-12 substr. MG1655 945802 NP_415763.1 CDS oppF NC_000913.3 1305764 1306768 D homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; oligopeptide transporter subunit 1305764..1306768 Escherichia coli str. K-12 substr. MG1655 945818 NP_415764.4 CDS yciU NC_000913.3 1306821 1307150 R UPF0263 family protein complement(1306821..1307150) Escherichia coli str. K-12 substr. MG1655 945819 NP_415765.1 CDS clsA NC_000913.3 1307185 1308645 R cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity; cardiolipin synthase 1 complement(1307185..1308645) Escherichia coli str. K-12 substr. MG1655 945821 YP_001165316.1 CDS yciY NC_000913.3 1308788 1308961 D uncharacterized protein 1308788..1308961 Escherichia coli str. K-12 substr. MG1655 5061502 NP_415766.1 CDS kch NC_000913.3 1309016 1310269 R putative potassium channel protein (VIC family); voltage-gated potassium channel complement(1309016..1310269) Escherichia coli str. K-12 substr. MG1655 945841 NP_415767.2 CDS yciI NC_000913.3 1310569 1310865 R putative DGPF domain-containing enzyme complement(1310569..1310865) Escherichia coli str. K-12 substr. MG1655 949085 NP_415768.1 CDS tonB NC_000913.3 1311089 1311808 D energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins; membrane spanning protein in TonB-ExbB-ExbD transport complex 1311089..1311808 Escherichia coli str. K-12 substr. MG1655 945843 NP_415769.1 CDS yciA NC_000913.3 1311848 1312246 R acyl-CoA esterase complement(1311848..1312246) Escherichia coli str. K-12 substr. MG1655 946634 NP_415770.1 CDS yciB NC_000913.3 1312351 1312890 R IspA family inner membrane protein complement(1312351..1312890) Escherichia coli str. K-12 substr. MG1655 946228 NP_415771.1 CDS yciC NC_000913.3 1312920 1313663 R UPF0259 family inner membrane protein complement(1312920..1313663) Escherichia coli str. K-12 substr. MG1655 945844 NP_415772.1 CDS ompW NC_000913.3 1314020 1314658 D putative outer membrane protein; outer membrane protein W 1314020..1314658 Escherichia coli str. K-12 substr. MG1655 945128 NP_415773.1 CDS yciE NC_000913.3 1314718 1315224 R putative rubrerythrin/ferritin-like metal-binding protein complement(1314718..1315224) Escherichia coli str. K-12 substr. MG1655 946871 NP_415774.1 CDS yciF NC_000913.3 1315270 1315770 R putative structural proteins; putative rubrerythrin/ferritin-like metal-binding protein complement(1315270..1315770) Escherichia coli str. K-12 substr. MG1655 947133 NP_415775.4 CDS yciG NC_000913.3 1315856 1316035 R KGG family protein complement(1315856..1316035) Escherichia coli str. K-12 substr. MG1655 947489 NP_415776.1 CDS trpA NC_000913.3 1316416 1317222 R tryptophan synthase, alpha protein; tryptophan synthase, alpha subunit complement(1316416..1317222) Escherichia coli str. K-12 substr. MG1655 946204 NP_415777.1 CDS trpB NC_000913.3 1317222 1318415 R tryptophan synthase, beta protein; tryptophan synthase, beta subunit complement(1317222..1318415) Escherichia coli str. K-12 substr. MG1655 945768 NP_415778.3 CDS trpC NC_000913.3 1318427 1319788 R N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase; fused indole-3-glycerolphosphate synthetase/N-(5-phosphoribosyl)anthranilate isomerase complement(1318427..1319788) Escherichia coli str. K-12 substr. MG1655 945519 NP_415779.1 CDS trpD NC_000913.3 1319789 1321384 R anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase; fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase complement(1319789..1321384) Escherichia coli str. K-12 substr. MG1655 945109 NP_415780.1 CDS trpE NC_000913.3 1321384 1322946 R anthranilate synthase component I; component I of anthranilate synthase complement(1321384..1322946) Escherichia coli str. K-12 substr. MG1655 945846 NP_415781.1 CDS trpL NC_000913.3 1323038 1323082 R trp operon leader peptide complement(1323038..1323082) Escherichia coli str. K-12 substr. MG1655 945856 NP_415782.1 CDS yciV NC_000913.3 1323220 1324101 D putative enzymes; PHP domain protein 1323220..1324101 Escherichia coli str. K-12 substr. MG1655 945857 NP_415783.6 CDS yciO NC_000913.3 1324098 1324718 D putative RNA binding protein 1324098..1324718 Escherichia coli str. K-12 substr. MG1655 945854 NP_415784.1 CDS yciQ NC_000913.3 1324746 1326641 D enhancer of membrane protein expression; putative inner membrane protein 1324746..1326641 Escherichia coli str. K-12 substr. MG1655 945850 NP_415785.1 CDS rluB NC_000913.3 1326852 1327727 D 23S rRNA pseudouridine(2605) synthase 1326852..1327727 Escherichia coli str. K-12 substr. MG1655 945840 NP_415786.1 CDS btuR NC_000913.3 1327767 1328357 R cob(I)alamin adenolsyltransferase; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(1327767..1328357) Escherichia coli str. K-12 substr. MG1655 945839 NP_415787.1 CDS yciK NC_000913.3 1328354 1329112 R putative oxidoreductase; putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase complement(1328354..1329112) Escherichia coli str. K-12 substr. MG1655 945838 NP_415788.1 CDS sohB NC_000913.3 1329332 1330381 D putative protease; inner membrane protein, S49 peptidase family protein 1329332..1330381 Escherichia coli str. K-12 substr. MG1655 945858 NP_415789.1 CDS yciN NC_000913.3 1330417 1330668 R DUF2498 protein YciN complement(1330417..1330668) Escherichia coli str. K-12 substr. MG1655 945860 NP_415790.1 CDS topA NC_000913.3 1331048 1333645 D DNA topoisomerase type I, omega protein; DNA topoisomerase I, omega subunit 1331048..1333645 Escherichia coli str. K-12 substr. MG1655 945862 NP_415791.1 CDS cysB NC_000913.3 1333855 1334829 D positive transcriptional regulator for cysteine regulon; N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 1333855..1334829 Escherichia coli str. K-12 substr. MG1655 945771 YP_588449.2 CDS ymiA NC_000913.3 1335124 1335288 D uncharacterized protein 1335124..1335288 Escherichia coli str. K-12 substr. MG1655 1450256 YP_588450.2 CDS yciX NC_000913.3 1335291 1335458 D uncharacterized protein 1335291..1335458 Escherichia coli str. K-12 substr. MG1655 1450257 NP_415792.1 CDS acnA NC_000913.3 1335831 1338506 D aconitate hydrase 1; aconitate hydratase 1 1335831..1338506 Escherichia coli str. K-12 substr. MG1655 946724 NP_415793.1 CDS ribA NC_000913.3 1338570 1339160 R GTP cyclohydrolase II complement(1338570..1339160) Escherichia coli str. K-12 substr. MG1655 945763 NP_415794.1 CDS pgpB NC_000913.3 1339330 1340094 D non-essential phosphatidylglycerophosphate phosphatase, membrane bound; phosphatidylglycerophosphatase B 1339330..1340094 Escherichia coli str. K-12 substr. MG1655 945863 NP_415795.1 CDS yciS NC_000913.3 1340243 1340551 D DUF1049 family inner membrane protein, function unknown 1340243..1340551 Escherichia coli str. K-12 substr. MG1655 944936 NP_415796.1 CDS yciM NC_000913.3 1340558 1341727 D putative heat shock protein; envelope integrity maintenance protein; EnvC-interacting protein 1340558..1341727 Escherichia coli str. K-12 substr. MG1655 944858 NP_415797.1 CDS pyrF NC_000913.3 1341921 1342658 D orotidine-5'-phosphate decarboxylase 1341921..1342658 Escherichia coli str. K-12 substr. MG1655 947121 NP_415798.2 CDS yciH NC_000913.3 1342658 1342984 D initiation factor function partial mimic, SUI1 family 1342658..1342984 Escherichia coli str. K-12 substr. MG1655 947058 NP_415799.1 CDS osmB NC_000913.3 1343110 1343328 R osmotically inducible lipoprotein; lipoprotein complement(1343110..1343328) Escherichia coli str. K-12 substr. MG1655 945866 NP_415800.1 CDS yciT NC_000913.3 1343597 1344346 R putative DEOR-type transcriptional regulator; global regulator of transcription; DeoR family complement(1343597..1344346) Escherichia coli str. K-12 substr. MG1655 945869 YP_001165317.1 CDS yciZ NC_000913.3 1344436 1344609 R uncharacterized protein complement(1344436..1344609) Escherichia coli str. K-12 substr. MG1655 5061509 NP_415801.1 CDS gmr NC_000913.3 1344757 1346742 R cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of Rnase II stability complement(1344757..1346742) Escherichia coli str. K-12 substr. MG1655 945868 YP_002791239.1 CDS ymiB NC_000913.3 1346796 1346900 D uncharacterized protein 1346796..1346900 Escherichia coli str. K-12 substr. MG1655 7751616 NP_415802.1 CDS rnb NC_000913.3 1346978 1348912 R RNase II, mRNA degradation; ribonuclease II complement(1346978..1348912) Escherichia coli str. K-12 substr. MG1655 945864 NP_415803.2 CDS yciW NC_000913.3 1348980 1350107 R putative oxidoreductase complement(1348980..1350107) Escherichia coli str. K-12 substr. MG1655 945859 NP_415804.1 CDS fabI NC_000913.3 1350251 1351039 R enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-[acyl-carrier-protein] reductase, NADH-dependent complement(1350251..1351039) Escherichia coli str. K-12 substr. MG1655 945870 NP_415805.1 CDS ycjD NC_000913.3 1351407 1351760 R DUF559 family endonuclease-related protein complement(1351407..1351760) Escherichia coli str. K-12 substr. MG1655 945871 NP_415806.1 CDS sapF NC_000913.3 1351828 1352634 R putative ATP-binding protein of peptide transport system; antimicrobial peptide transport ABC system ATP-binding protein complement(1351828..1352634) Escherichia coli str. K-12 substr. MG1655 945335 NP_415807.1 CDS sapD NC_000913.3 1352636 1353628 R putative ATP-binding protein of peptide transport system; antimicrobial peptide transport ABC system ATP-binding protein complement(1352636..1353628) Escherichia coli str. K-12 substr. MG1655 946203 NP_415808.1 CDS sapC NC_000913.3 1353628 1354518 R homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; antimicrobial peptide transport ABC transporter permease complement(1353628..1354518) Escherichia coli str. K-12 substr. MG1655 945266 NP_415809.1 CDS sapB NC_000913.3 1354505 1355470 R homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; antimicrobial peptide transport ABC transporter permease complement(1354505..1355470) Escherichia coli str. K-12 substr. MG1655 946191 NP_415810.1 CDS sapA NC_000913.3 1355467 1357110 R homolog of Salmonella peptide transport periplasmic protein; periplasmic-binding component of ABC superfamily; antimicrobial peptide transport ABC transporter periplasmic binding protein complement(1355467..1357110) Escherichia coli str. K-12 substr. MG1655 945873 NP_415811.1 CDS ymjA NC_000913.3 1357423 1357668 R DUF2543 family protein complement(1357423..1357668) Escherichia coli str. K-12 substr. MG1655 945874 NP_415812.4 CDS puuP NC_000913.3 1357802 1359187 R putative amino acid/amine transport protein; putrescine importer complement(1357802..1359187) Escherichia coli str. K-12 substr. MG1655 946287 NP_415813.4 CDS puuA NC_000913.3 1359490 1360908 R putative glutamine synthetase; glutamate--putrescine ligase complement(1359490..1360908) Escherichia coli str. K-12 substr. MG1655 946202 NP_415814.4 CDS puuD NC_000913.3 1361120 1361884 D probable amidotransferase subunit; gamma-glutamyl-gamma-aminobutyrate hydrolase 1361120..1361884 Escherichia coli str. K-12 substr. MG1655 945882 NP_415815.1 CDS puuR NC_000913.3 1361911 1362468 D repressor for the divergent puu operons, putrescine inducible 1361911..1362468 Escherichia coli str. K-12 substr. MG1655 945886 NP_415816.1 CDS puuC NC_000913.3 1362743 1364230 D aldehyde dehydrogenase, prefers NADP over NAD; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase 1362743..1364230 Escherichia coli str. K-12 substr. MG1655 947003 NP_415817.1 CDS puuB NC_000913.3 1364232 1365512 D probable oxidoreductase; gamma-glutamylputrescine oxidoreductase 1364232..1365512 Escherichia coli str. K-12 substr. MG1655 945072 NP_415818.1 CDS puuE NC_000913.3 1365550 1366815 D 4-aminobutyrate aminotransferase; 4-aminobutyrate aminotransferase, PLP-dependent 1365550..1366815 Escherichia coli str. K-12 substr. MG1655 945446 NP_415819.4 CDS pspF NC_000913.3 1366935 1367912 R psp operon transcriptional activator complement(1366935..1367912) Escherichia coli str. K-12 substr. MG1655 945683 NP_415820.1 CDS pspA NC_000913.3 1368079 1368747 D phage shock protein, inner membrane protein; regulatory protein for phage-shock-protein operon 1368079..1368747 Escherichia coli str. K-12 substr. MG1655 945887 NP_415821.1 CDS pspB NC_000913.3 1368801 1369025 D phage shock protein; psp operon transcription co-activator 1368801..1369025 Escherichia coli str. K-12 substr. MG1655 945893 NP_415822.1 CDS pspC NC_000913.3 1369025 1369384 D phage shock protein: activates phage shock-protein expression; psp operon transcription co-activator 1369025..1369384 Escherichia coli str. K-12 substr. MG1655 945499 NP_415823.1 CDS pspD NC_000913.3 1369393 1369614 D phage shock protein; peripheral inner membrane phage-shock protein 1369393..1369614 Escherichia coli str. K-12 substr. MG1655 945635 NP_415824.1 CDS pspE NC_000913.3 1369689 1370003 D phage shock protein; thiosulfate:cyanide sulfurtransferase (rhodanese) 1369689..1370003 Escherichia coli str. K-12 substr. MG1655 945652 NP_415825.4 CDS ycjM NC_000913.3 1370216 1371895 D putative polysaccharide hydrolase; alpha amylase catalytic domain family protein 1370216..1371895 Escherichia coli str. K-12 substr. MG1655 945659 NP_415826.1 CDS ycjN NC_000913.3 1371909 1373201 D putative ABC superfamily sugar transporter periplasmic-binding protein 1371909..1373201 Escherichia coli str. K-12 substr. MG1655 945696 NP_415827.1 CDS ycjO NC_000913.3 1373222 1374103 D putative binding-protein dependent transport protein; inner membrane putative ABC superfamily sugar transporter permease 1373222..1374103 Escherichia coli str. K-12 substr. MG1655 945888 NP_415828.1 CDS ycjP NC_000913.3 1374090 1374932 D putative transport system permease protein; inner membrane putative ABC superfamily sugar transporter permease 1374090..1374932 Escherichia coli str. K-12 substr. MG1655 945892 NP_415829.1 CDS ycjQ NC_000913.3 1374963 1376015 D putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase 1374963..1376015 Escherichia coli str. K-12 substr. MG1655 945971 NP_415830.2 CDS ycjR NC_000913.3 1376034 1376822 D putative TIM alpha/beta barrel enzyme 1376034..1376822 Escherichia coli str. K-12 substr. MG1655 947427 NP_415831.1 CDS ycjS NC_000913.3 1376832 1377887 D putative dehydrogenase; putative NADH-binding oxidoreductase 1376832..1377887 Escherichia coli str. K-12 substr. MG1655 948589 NP_415832.1 CDS ycjT NC_000913.3 1377884 1380151 D putative family 65 glycosyl hydrolase 1377884..1380151 Escherichia coli str. K-12 substr. MG1655 945895 NP_415833.1 CDS ycjU NC_000913.3 1380148 1380807 D putative beta-phosphoglucomutase; beta-phosphoglucomutase 1380148..1380807 Escherichia coli str. K-12 substr. MG1655 945891 b4524 CDS ycjV NC_000913.3 1380821 1381902 D pseudogene; putative ATP-binding component of a transport system; join(1380821..1381777,1381777..1381902) Escherichia coli str. K-12 substr. MG1655 4306141 NP_415835.1 CDS ompG NC_000913.3 1381947 1382852 D outer membrane protein; outer membrane porin G 1381947..1382852 Escherichia coli str. K-12 substr. MG1655 945889 NP_415836.1 CDS ycjW NC_000913.3 1382963 1383961 R putative LACI-type transcriptional regulator; LacI family putative transcriptional repressor complement(1382963..1383961) Escherichia coli str. K-12 substr. MG1655 945875 NP_415837.1 CDS ycjX NC_000913.3 1384117 1385514 D putative EC 2.1 enzymes; DUF463 family protein, putative P-loop NTPase 1384117..1385514 Escherichia coli str. K-12 substr. MG1655 945872 NP_415838.1 CDS ycjF NC_000913.3 1385511 1386572 D UPF0283 family inner membrane protein 1385511..1386572 Escherichia coli str. K-12 substr. MG1655 945878 NP_415839.1 CDS tyrR NC_000913.3 1386720 1388261 D transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport; aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase 1386720..1388261 Escherichia coli str. K-12 substr. MG1655 945879 NP_415840.1 CDS tpx NC_000913.3 1388305 1388811 R thiol peroxidase; lipid hydroperoxide peroxidase complement(1388305..1388811) Escherichia coli str. K-12 substr. MG1655 945880 NP_415841.4 CDS ycjG NC_000913.3 1388930 1389895 D putative muconate cycloisomerase I; L-Ala-D/L-Glu epimerase 1388930..1389895 Escherichia coli str. K-12 substr. MG1655 946013 NP_415842.2 CDS mpaA NC_000913.3 1389870 1390598 R putative carboxypeptidase; murein peptide amidase A complement(1389870..1390598) Escherichia coli str. K-12 substr. MG1655 945969 b4525 CDS ymjC NC_000913.3 1390725 1390862 R pseudogene; complement(1390725..1390862) Escherichia coli str. K-12 substr. MG1655 1450258 b4673 CDS ymjD NC_000913.3 1390868 1390933 R pseudogene fragment, MhpC family; complement(1390868..1390933) Escherichia coli str. K-12 substr. MG1655 7751617 NP_415843.2 CDS ycjY NC_000913.3 1390933 1391853 R S9 homolog non-peptidase family protein complement(1390933..1391853) Escherichia coli str. K-12 substr. MG1655 945988 NP_415844.1 CDS pgrR NC_000913.3 1391991 1392890 D putative transcriptional regulator LYSR-type; murein peptide degradation regulator 1391991..1392890 Escherichia coli str. K-12 substr. MG1655 945930 NP_415845.2 CDS mppA NC_000913.3 1393227 1394840 D periplasmic-binding component of ABC superfamily; murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit 1393227..1394840 Escherichia coli str. K-12 substr. MG1655 945951 NP_415846.1 CDS ynaI NC_000913.3 1394891 1395922 R mechanosensitive channel protein, very small conductance complement(1394891..1395922) Escherichia coli str. K-12 substr. MG1655 945898 NP_415847.1 CDS insH1 NC_000913.3 1396076 1397092 D IS5 transposase and trans-activator 1396076..1397092 Escherichia coli str. K-12 substr. MG1655 945896 NP_415848.1 CDS ynaJ NC_000913.3 1397365 1397622 D DUF2534 family putative inner membrane protein 1397365..1397622 Escherichia coli str. K-12 substr. MG1655 945901 NP_415849.1 CDS uspE NC_000913.3 1397672 1398622 R stress-induced protein complement(1397672..1398622) Escherichia coli str. K-12 substr. MG1655 945904 NP_415850.1 CDS fnr NC_000913.3 1398774 1399526 R transcriptional regulation of aerobic, anaerobic respiration, osmotic balance; oxygen-sensing anaerobic growth regulon transcriptional regulator; autorepressor complement(1398774..1399526) Escherichia coli str. K-12 substr. MG1655 945908 NP_415851.1 CDS ogt NC_000913.3 1399721 1400236 R O-6-alkylguanine-DNA/cysteine-protein methyltransferase; O-6-alkylguanine-DNA:cysteine-protein methyltransferase complement(1399721..1400236) Escherichia coli str. K-12 substr. MG1655 945853 NP_415852.2 CDS abgT NC_000913.3 1400247 1401773 R p-aminobenzoyl-glutamate transporter; membrane protein complement(1400247..1401773) Escherichia coli str. K-12 substr. MG1655 945912 NP_415853.1 CDS abgB NC_000913.3 1401810 1403255 R p-aminobenzoyl-glutamate hydrolase, B subunit complement(1401810..1403255) Escherichia coli str. K-12 substr. MG1655 945950 NP_415854.4 CDS abgA NC_000913.3 1403255 1404565 R p-aminobenzoyl-glutamate hydrolase, A subunit complement(1403255..1404565) Escherichia coli str. K-12 substr. MG1655 945742 NP_415855.1 CDS abgR NC_000913.3 1404741 1405649 D putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator of abgABT operon 1404741..1405649 Escherichia coli str. K-12 substr. MG1655 945831 NP_415856.1 CDS smrA NC_000913.3 1405979 1406542 D DNA endonuclease 1405979..1406542 Escherichia coli str. K-12 substr. MG1655 945953 NP_415857.2 CDS ydaM NC_000913.3 1406563 1407795 R diguanylate cyclase, csgD regulator complement(1406563..1407795) Escherichia coli str. K-12 substr. MG1655 945909 NP_415858.1 CDS ydaN NC_000913.3 1408050 1409033 D putative Zn(II) transporter 1408050..1409033 Escherichia coli str. K-12 substr. MG1655 945910 NP_415859.1 CDS dbpA NC_000913.3 1409511 1410884 D ATP-dependent RNA helicase; ATP-dependent RNA helicase, specific for 23S rRNA 1409511..1410884 Escherichia coli str. K-12 substr. MG1655 947153 NP_415860.1 CDS ttcA NC_000913.3 1411013 1411948 R tRNA 2-thiocytidine biosynthesis protein complement(1411013..1411948) Escherichia coli str. K-12 substr. MG1655 948967 NP_415861.1 CDS intR NC_000913.3 1412000 1413235 R Rac prophage; integrase complement(1412000..1413235) Escherichia coli str. K-12 substr. MG1655 946976 NP_415862.4 CDS ydaQ NC_000913.3 1413237 1413452 R putative lambdoid prophage Rac excisionase; Rac prophage; conserved protein complement(1413237..1413452) Escherichia coli str. K-12 substr. MG1655 947399 NP_415863.1 CDS rcbA NC_000913.3 1413531 1413740 R double-strand break reduction protein, Rac prophage complement(1413531..1413740) Escherichia coli str. K-12 substr. MG1655 947504 NP_415864.1 CDS ralR NC_000913.3 1413733 1413927 R restriction alleviation and modification enhancement; Rac prophage; restriction alleviation protein complement(1413733..1413927) Escherichia coli str. K-12 substr. MG1655 945914 NP_415865.1 CDS recT NC_000913.3 1413984 1414793 R recombinase, DNA renaturation; Rac prophage; recombination and repair protein complement(1413984..1414793) Escherichia coli str. K-12 substr. MG1655 945917 NP_415866.1 CDS recE NC_000913.3 1414786 1417386 R exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific; Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease complement(1414786..1417386) Escherichia coli str. K-12 substr. MG1655 945918 NP_415867.1 CDS racC NC_000913.3 1417488 1417763 R RacC protein; Rac prophage; uncharacterized protein complement(1417488..1417763) Escherichia coli str. K-12 substr. MG1655 945920 YP_588451.1 CDS ydaE NC_000913.3 1417838 1418008 R Rac prophage; conserved protein complement(1417838..1418008) Escherichia coli str. K-12 substr. MG1655 948959 NP_415869.2 CDS kilR NC_000913.3 1418008 1418229 R Kil protein (killing function) of lambdoid prophage Rac; Rac prophage; inhibitor of ftsZ, killing protein complement(1418008..1418229) Escherichia coli str. K-12 substr. MG1655 945921 NP_415870.4 CDS sieB NC_000913.3 1418671 1419159 D phage superinfection exclusion protein; Rac prophage; phage superinfection exclusion protein 1418671..1419159 Escherichia coli str. K-12 substr. MG1655 945913 NP_415872.2 CDS ydaF NC_000913.3 1419156 1419311 R Rac prophage; uncharacterized protein complement(1419156..1419311) Escherichia coli str. K-12 substr. MG1655 945911 NP_415873.2 CDS ydaG NC_000913.3 1419322 1419456 R Rac prophage; uncharacterized protein complement(1419322..1419456) Escherichia coli str. K-12 substr. MG1655 945907 NP_415874.1 CDS racR NC_000913.3 1419765 1420241 R Rac prophage; putative DNA-binding transcriptional regulator complement(1419765..1420241) Escherichia coli str. K-12 substr. MG1655 945899 NP_415875.1 CDS ydaS NC_000913.3 1420365 1420661 D Rac prophage; putative DNA-binding transcriptional regulator 1420365..1420661 Escherichia coli str. K-12 substr. MG1655 945923 NP_415876.1 CDS ydaT NC_000913.3 1420684 1421106 D Rac prophage; uncharacterized protein 1420684..1421106 Escherichia coli str. K-12 substr. MG1655 945924 NP_415877.1 CDS ydaU NC_000913.3 1421119 1421976 D Rac prophage; conserved protein 1421119..1421976 Escherichia coli str. K-12 substr. MG1655 945925 NP_415878.1 CDS ydaV NC_000913.3 1421983 1422729 D putative DNA replication factor; Rac prophage; putative DNA replication protein 1421983..1422729 Escherichia coli str. K-12 substr. MG1655 945926 b1361 CDS ydaW NC_000913.3 1422701 1423200 D Rac prophage; pseudogene, DNA-binding protein family;Phage or Prophage Related; 1422701..1423200 Escherichia coli str. K-12 substr. MG1655 945927 b1362 CDS rzpR NC_000913.3 1423201 1423644 D pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS; 1423201..1423644 Escherichia coli str. K-12 substr. MG1655 945928 YP_588452.1 CDS rzoR NC_000913.3 1423400 1423585 D completely contained in another CDS; Rac prophage; putative lipoprotein 1423400..1423585 Escherichia coli str. K-12 substr. MG1655 1450262 NP_415881.1 CDS trkG NC_000913.3 1423782 1425239 D Rac prophage; potassium transporter subunit 1423782..1425239 Escherichia coli str. K-12 substr. MG1655 945932 NP_415883.1 CDS ynaK NC_000913.3 1425377 1425640 D Rac prophage; conserved protein 1425377..1425640 Escherichia coli str. K-12 substr. MG1655 947417 b1366 CDS ydaY NC_000913.3 1425630 1426082 D pseudogene, Rac prophage;Phage or Prophage Related; 1425630..1426082 Escherichia coli str. K-12 substr. MG1655 946208 b1368 CDS tmpR NC_000913.3 1426454 1427386 D Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein; 1426454..1427386 Escherichia coli str. K-12 substr. MG1655 947543 b4570 CDS lomR NC_000913.3 1427389 1428984 D pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion; join(1427389..1427598,1428795..1428984) Escherichia coli str. K-12 substr. MG1655 4056036 b1370 CDS insH1 NC_000913.3 1427746 1428726 R IS5 transposase and trans-activator;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; complement(1427746..1428726) Escherichia coli str. K-12 substr. MG1655 945944 NP_415890.2 CDS stfR NC_000913.3 1429049 1432411 D Rac prophage; putative tail fiber protein 1429049..1432411 Escherichia coli str. K-12 substr. MG1655 945207 NP_415891.1 CDS tfaR NC_000913.3 1432411 1432986 D tail fiber assembly protein homolog from lambdoid prophage Rac; Rac prophage; putative tail fiber assembly protein 1432411..1432986 Escherichia coli str. K-12 substr. MG1655 946062 NP_415892.1 CDS pinR NC_000913.3 1433084 1433674 R Rac prophage; putative site-specific recombinase complement(1433084..1433674) Escherichia coli str. K-12 substr. MG1655 948973 NP_415893.2 CDS ynaE NC_000913.3 1433991 1434224 R cold shock protein, Rac prophage complement(1433991..1434224) Escherichia coli str. K-12 substr. MG1655 946078 b4638 CDS ttcC NC_000913.3 1434958 1435008 R pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related; complement(1434958..1435008) Escherichia coli str. K-12 substr. MG1655 5625564 NP_415894.4 CDS uspF NC_000913.3 1435185 1435619 R putative filament protein; stress-induced protein, ATP-binding protein complement(1435185..1435619) Escherichia coli str. K-12 substr. MG1655 945948 NP_415895.1 CDS ompN NC_000913.3 1435760 1436893 R outer membrane pore protein N, non-specific complement(1435760..1436893) Escherichia coli str. K-12 substr. MG1655 946313 NP_415896.1 CDS pfo NC_000913.3 1437260 1440784 R putative oxidoreductase, Fe-S subunit; pyruvate-flavodoxin oxidoreductase complement(1437260..1440784) Escherichia coli str. K-12 substr. MG1655 946587 YP_588453.1 CDS ydbJ NC_000913.3 1441058 1441324 D DUF333 family putative lipoprotein 1441058..1441324 Escherichia coli str. K-12 substr. MG1655 4056027 NP_415897.1 CDS hslJ NC_000913.3 1441321 1441743 R heat shock protein hslJ; heat-inducible lipoprotein involved in novobiocin resistance complement(1441321..1441743) Escherichia coli str. K-12 substr. MG1655 946525 NP_415898.1 CDS ldhA NC_000913.3 1441854 1442843 R fermentative D-lactate dehydrogenase, NAD-dependent complement(1441854..1442843) Escherichia coli str. K-12 substr. MG1655 946315 NP_415899.1 CDS ydbH NC_000913.3 1443051 1445690 D putative membrane-anchored protein, function unknown 1443051..1445690 Escherichia coli str. K-12 substr. MG1655 945949 NP_415900.1 CDS ynbE NC_000913.3 1445687 1445872 D lipoprotein 1445687..1445872 Escherichia coli str. K-12 substr. MG1655 945946 NP_415901.2 CDS ydbL NC_000913.3 1445880 1446206 D DUF1318 family protein 1445880..1446206 Escherichia coli str. K-12 substr. MG1655 945943 NP_415902.1 CDS feaR NC_000913.3 1446378 1447283 R regulatory protein for 2-phenylethylamine catabolism; transcriptional activator for tynA and feaB complement(1446378..1447283) Escherichia coli str. K-12 substr. MG1655 945941 NP_415903.4 CDS feaB NC_000913.3 1447519 1449018 D phenylacetaldehyde dehydrogenase 1447519..1449018 Escherichia coli str. K-12 substr. MG1655 945933 NP_415904.3 CDS tynA NC_000913.3 1449076 1451349 R copper amine oxidase (tyramine oxidase); tyramine oxidase, copper-requiring complement(1449076..1451349) Escherichia coli str. K-12 substr. MG1655 945939 NP_415905.1 CDS paaZ NC_000913.3 1451597 1453642 R fused oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase complement(1451597..1453642) Escherichia coli str. K-12 substr. MG1655 945954 NP_415906.1 CDS paaA NC_000913.3 1453927 1454856 D ring 1,2-phenylacetyl-CoA epoxidase subunit 1453927..1454856 Escherichia coli str. K-12 substr. MG1655 945833 NP_415907.1 CDS paaB NC_000913.3 1454868 1455155 D putative ring 1,2-phenylacetyl-CoA epoxidase subunit 1454868..1455155 Escherichia coli str. K-12 substr. MG1655 947595 NP_415908.1 CDS paaC NC_000913.3 1455164 1455910 D ring 1,2-phenylacetyl-CoA epoxidase subunit 1455164..1455910 Escherichia coli str. K-12 substr. MG1655 945956 NP_415909.4 CDS paaD NC_000913.3 1455925 1456422 D ring 1,2-phenylacetyl-CoA epoxidase subunit 1455925..1456422 Escherichia coli str. K-12 substr. MG1655 945959 NP_415910.1 CDS paaE NC_000913.3 1456430 1457500 D ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component 1456430..1457500 Escherichia coli str. K-12 substr. MG1655 945962 NP_415911.1 CDS paaF NC_000913.3 1457497 1458264 D 2,3-dehydroadipyl-CoA hydratase 1457497..1458264 Escherichia coli str. K-12 substr. MG1655 946011 NP_415912.1 CDS paaG NC_000913.3 1458264 1459052 D 1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming 1458264..1459052 Escherichia coli str. K-12 substr. MG1655 946263 NP_415913.1 CDS paaH NC_000913.3 1459054 1460481 D 3-hydroxyadipyl-CoA dehydrogenase, NAD+-dependent 1459054..1460481 Escherichia coli str. K-12 substr. MG1655 945940 NP_415914.1 CDS paaI NC_000913.3 1460471 1460893 D hydroxyphenylacetyl-CoA thioesterase 1460471..1460893 Escherichia coli str. K-12 substr. MG1655 945265 NP_415915.1 CDS paaJ NC_000913.3 1460893 1462098 D 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase 1460893..1462098 Escherichia coli str. K-12 substr. MG1655 946121 NP_415916.1 CDS paaK NC_000913.3 1462125 1463438 D phenylacetyl-CoA ligase 1462125..1463438 Escherichia coli str. K-12 substr. MG1655 945963 NP_415917.1 CDS paaX NC_000913.3 1463539 1464489 D transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer 1463539..1464489 Escherichia coli str. K-12 substr. MG1655 945966 NP_415918.1 CDS paaY NC_000913.3 1464471 1465061 D putative hexapeptide repeat acetyltransferase 1464471..1465061 Escherichia coli str. K-12 substr. MG1655 945965 YP_002791240.1 CDS ynbG NC_000913.3 1465165 1465230 R uncharacterized protein complement(1465165..1465230) Escherichia coli str. K-12 substr. MG1655 7751614 b4492 CDS ydbA NC_000913.3 1465392 1474013 D pseudogene, autotransporter homolog; interrupted by IS2 and IS30; join(1465392..1467904,1469241..1469293,1470517..1474013) Escherichia coli str. K-12 substr. MG1655 2847750 NP_415920.1 CDS insD1 NC_000913.3 1467921 1468826 R IS2 transposase TnpB complement(1467921..1468826) Escherichia coli str. K-12 substr. MG1655 945952 NP_415921.2 CDS insC1 NC_000913.3 1468784 1469149 R IS2 repressor TnpA complement(1468784..1469149) Escherichia coli str. K-12 substr. MG1655 945967 NP_415922.1 CDS insI1 NC_000913.3 1469358 1470509 D IS30 transposase 1469358..1470509 Escherichia coli str. K-12 substr. MG1655 945968 NP_415924.1 CDS ydbC NC_000913.3 1474221 1475081 D putative dehydrogenase; putative NAD(P)-binding oxidoreductase 1474221..1475081 Escherichia coli str. K-12 substr. MG1655 945980 NP_415925.2 CDS ydbD NC_000913.3 1475144 1477450 D PF10971 family putative periplasmic methylglyoxal resistance protein 1475144..1477450 Escherichia coli str. K-12 substr. MG1655 945983 NP_415926.4 CDS ynbA NC_000913.3 1477621 1478226 D inner membrane protein 1477621..1478226 Escherichia coli str. K-12 substr. MG1655 945973 NP_415927.1 CDS ynbB NC_000913.3 1478226 1479122 D putative phosphatidate cytidiltransferase; putative CDP-diglyceride synthase 1478226..1479122 Escherichia coli str. K-12 substr. MG1655 945972 NP_415928.1 CDS ynbC NC_000913.3 1479138 1480895 D putative esterase 1479138..1480895 Escherichia coli str. K-12 substr. MG1655 945970 NP_415929.1 CDS ynbD NC_000913.3 1480909 1482201 D putative enzymes; putative phosphatase inner membrane protein 1480909..1482201 Escherichia coli str. K-12 substr. MG1655 945985 NP_415930.1 CDS azoR NC_000913.3 1482255 1482860 R acyl carrier protein phosphodiesterase; NADH-azoreductase, FMN-dependent complement(1482255..1482860) Escherichia coli str. K-12 substr. MG1655 947569 NP_415931.4 CDS hrpA NC_000913.3 1483061 1486963 D helicase, ATP-dependent; putative ATP-dependent helicase 1483061..1486963 Escherichia coli str. K-12 substr. MG1655 948444 NP_415932.1 CDS ydcF NC_000913.3 1487235 1488035 D DUF218 superfamily protein, SAM-binding 1487235..1488035 Escherichia coli str. K-12 substr. MG1655 946215 NP_415933.1 CDS aldA NC_000913.3 1488232 1489671 D aldehyde dehydrogenase, NAD-linked; aldehyde dehydrogenase A, NAD-linked 1488232..1489671 Escherichia coli str. K-12 substr. MG1655 945672 b4493 CDS gapC NC_000913.3 1489713 1490713 R pseudogene, GAP dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase (second fragment); complement(join(1489713..1489964,1489964..1490713)) Escherichia coli str. K-12 substr. MG1655 2847738 NP_415935.2 CDS cybB NC_000913.3 1490902 1491432 D cytochrome b561 1490902..1491432 Escherichia coli str. K-12 substr. MG1655 947241 NP_415936.1 CDS ydcA NC_000913.3 1491677 1491850 D putative periplasmic protein 1491677..1491850 Escherichia coli str. K-12 substr. MG1655 945986 YP_025301.1 CDS hokB NC_000913.3 1491922 1492071 R small toxic membrane polypeptide; toxic polypeptide, small complement(1491922..1492071) Escherichia coli str. K-12 substr. MG1655 2847727 NP_415937.1 CDS mokB NC_000913.3 1491962 1492129 R regulatory peptide whose translation enables hokB expression; regulatory peptide complement(1491962..1492129) Escherichia coli str. K-12 substr. MG1655 948820 NP_415938.1 CDS trg NC_000913.3 1492470 1494110 D methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor 1492470..1494110 Escherichia coli str. K-12 substr. MG1655 945995 NP_415939.2 CDS ydcI NC_000913.3 1494148 1495071 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(1494148..1495071) Escherichia coli str. K-12 substr. MG1655 948865 NP_415940.1 CDS ydcJ NC_000913.3 1495288 1496631 D putative metalloenzyme 1495288..1496631 Escherichia coli str. K-12 substr. MG1655 945991 NP_415941.5 CDS opgD NC_000913.3 1496856 1498511 D putative glycoprotein; osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein 1496856..1498511 Escherichia coli str. K-12 substr. MG1655 945994 NP_415943.4 CDS ydcH NC_000913.3 1498651 1498875 D DUF465 family protein 1498651..1498875 Escherichia coli str. K-12 substr. MG1655 945997 NP_415944.1 CDS rimL NC_000913.3 1498938 1499477 D ribosomal-protein-serine acetyltransferase; ribosomal-protein-L7/L12-serine acetyltransferase 1498938..1499477 Escherichia coli str. K-12 substr. MG1655 945998 NP_415945.1 CDS ydcK NC_000913.3 1499469 1500449 R uncharacterized protein complement(1499469..1500449) Escherichia coli str. K-12 substr. MG1655 944932 NP_415946.1 CDS tehA NC_000913.3 1500573 1501565 D potassium-tellurite ethidium and proflavin transporter 1500573..1501565 Escherichia coli str. K-12 substr. MG1655 945852 NP_415947.1 CDS tehB NC_000913.3 1501562 1502155 D tellurite, selenium methyltransferase, SAM-dependent; tellurite, selenium resistance protein 1501562..1502155 Escherichia coli str. K-12 substr. MG1655 945979 NP_415948.1 CDS ydcL NC_000913.3 1502457 1503125 D lipoprotein 1502457..1503125 Escherichia coli str. K-12 substr. MG1655 948203 b4578 CDS insP NC_000913.3 1503218 1503649 R pseudogene, IS609 transposase A;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; complement(1503218..1503649) Escherichia coli str. K-12 substr. MG1655 4056028 NP_415949.2 CDS insQ NC_000913.3 1503717 1504865 D IS609 transposase B 1503717..1504865 Escherichia coli str. K-12 substr. MG1655 944942 NP_415950.4 CDS ydcO NC_000913.3 1504905 1506080 R putative membrane transport protein; BenE family inner membrane putative transporter complement(1504905..1506080) Escherichia coli str. K-12 substr. MG1655 947247 NP_415951.1 CDS ydcN NC_000913.3 1506172 1506708 D putative DNA-binding transcriptional regulator 1506172..1506708 Escherichia coli str. K-12 substr. MG1655 946000 NP_415952.2 CDS ydcP NC_000913.3 1506781 1508742 D putative protease; putative peptidase 1506781..1508742 Escherichia coli str. K-12 substr. MG1655 945993 NP_415953.1 CDS yncJ NC_000913.3 1508834 1509064 R uncharacterized protein complement(1508834..1509064) Escherichia coli str. K-12 substr. MG1655 945990 NP_415954.2 CDS hicA NC_000913.3 1509286 1509462 D mRNA interferase toxin of the HicAB toxin-antitoxin system 1509286..1509462 Escherichia coli str. K-12 substr. MG1655 945989 NP_415955.2 CDS hicB NC_000913.3 1509508 1509924 D antitoxin for the HicAB toxin-antitoxin system 1509508..1509924 Escherichia coli str. K-12 substr. MG1655 946001 NP_415956.1 CDS ydcR NC_000913.3 1510003 1511409 D multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system; putative DNA-binding transcriptional regulator/putative amino transferase 1510003..1511409 Escherichia coli str. K-12 substr. MG1655 946004 NP_415957.1 CDS ydcS NC_000913.3 1511654 1512799 D periplasmic-binding component of ABC superfamily; polyhydroxybutyrate (PHB) synthase, ABC transporter periplasmic binding protein homolog 1511654..1512799 Escherichia coli str. K-12 substr. MG1655 946005 NP_415958.1 CDS ydcT NC_000913.3 1512817 1513830 D ATP-binding component of ABC superfamily; putative spermidine/putrescine transporter subunit 1512817..1513830 Escherichia coli str. K-12 substr. MG1655 946007 NP_415959.1 CDS ydcU NC_000913.3 1513831 1514772 D membrane component of ABC superfamily; putative spermidine/putrescine transporter subunit 1513831..1514772 Escherichia coli str. K-12 substr. MG1655 945976 NP_415960.1 CDS ydcV NC_000913.3 1514762 1515556 D membrane component of ABC superfamily; putative spermidine/putrescine transporter subunit 1514762..1515556 Escherichia coli str. K-12 substr. MG1655 945903 NP_415961.1 CDS patD NC_000913.3 1515578 1517002 D putative aldehyde dehydrogenase; gamma-aminobutyraldehyde dehydrogenase 1515578..1517002 Escherichia coli str. K-12 substr. MG1655 945876 YP_001165318.1 CDS yncL NC_000913.3 1517099 1517194 R stress-induced small inner membrane enterobacterial protein complement(1517099..1517194) Escherichia coli str. K-12 substr. MG1655 5061503 NP_415962.2 CDS ydcX NC_000913.3 1517389 1517562 D DUF2566 family protein 1517389..1517562 Escherichia coli str. K-12 substr. MG1655 945936 NP_415963.1 CDS ydcY NC_000913.3 1517648 1517881 D uncharacterized protein 1517648..1517881 Escherichia coli str. K-12 substr. MG1655 945916 NP_415964.1 CDS ydcZ NC_000913.3 1517882 1518331 R DUF606 family inner membrane protein complement(1517882..1518331) Escherichia coli str. K-12 substr. MG1655 946008 NP_415965.1 CDS mnaT NC_000913.3 1518328 1518846 R methionine N-acyltransferase; L-amino acid N-acyltransferase complement(1518328..1518846) Escherichia coli str. K-12 substr. MG1655 946010 NP_415966.6 CDS curA NC_000913.3 1519027 1520064 D putative oxidoreductase; curcumin/dihydrocurcumin reductase, NADPH-dependent 1519027..1520064 Escherichia coli str. K-12 substr. MG1655 946012 NP_415967.2 CDS mcbR NC_000913.3 1520262 1520927 D colanic acid and biofilm gene transcriptional regulator, MqsR-controlled 1520262..1520927 Escherichia coli str. K-12 substr. MG1655 946014 NP_415968.1 CDS yncD NC_000913.3 1520963 1523065 R putative iron outer membrane transporter complement(1520963..1523065) Escherichia coli str. K-12 substr. MG1655 946015 NP_415969.1 CDS yncE NC_000913.3 1523307 1524368 D putative receptor; ATP-binding protein, periplasmic, function unknown 1523307..1524368 Escherichia coli str. K-12 substr. MG1655 946006 NP_415970.4 CDS ansP NC_000913.3 1524481 1525980 R L-asparagine permease; L-asparagine transporter complement(1524481..1525980) Escherichia coli str. K-12 substr. MG1655 946019 NP_415971.1 CDS yncG NC_000913.3 1526247 1526864 D glutathione S-transferase homolog 1526247..1526864 Escherichia coli str. K-12 substr. MG1655 946023 NP_415972.1 CDS yncH NC_000913.3 1526940 1527152 D IPR020099 family protein 1526940..1527152 Escherichia coli str. K-12 substr. MG1655 946024 b1456 CDS rhsE NC_000913.3 1527902 1529938 D pseudogene, Rhs family protein; 1527902..1529938 Escherichia coli str. K-12 substr. MG1655 946026 NP_415974.1 CDS ydcD NC_000913.3 1529922 1530404 D uncharacterized protein 1529922..1530404 Escherichia coli str. K-12 substr. MG1655 946958 b1459 CDS yncI NC_000913.3 1530586 1531639 D pseudogene; join(1530586..1531323,1531325..1531639) Escherichia coli str. K-12 substr. MG1655 945121 NP_415977.1 CDS ydcC NC_000913.3 1531816 1532952 D H repeat-associated protein (ORF-H); H repeat-associated putative transposase 1531816..1532952 Escherichia coli str. K-12 substr. MG1655 947435 NP_415978.1 CDS pptA NC_000913.3 1533052 1533285 D 4-oxalocrotonate tautomerase 1533052..1533285 Escherichia coli str. K-12 substr. MG1655 945731 NP_415979.2 CDS yddH NC_000913.3 1533282 1533851 R flavin reductase like-protein complement(1533282..1533851) Escherichia coli str. K-12 substr. MG1655 946192 NP_415980.1 CDS nhoA NC_000913.3 1534024 1534869 D N-hydroxyarylamine O-acetyltransferase 1534024..1534869 Escherichia coli str. K-12 substr. MG1655 947251 NP_415981.1 CDS yddE NC_000913.3 1534965 1535858 R PhzC-PhzF family protein complement(1534965..1535858) Escherichia coli str. K-12 substr. MG1655 944782 NP_415982.1 CDS narV NC_000913.3 1535937 1536617 R nitrate reductase 2 (NRZ), gamma subunit complement(1535937..1536617) Escherichia coli str. K-12 substr. MG1655 946029 NP_415983.1 CDS narW NC_000913.3 1536614 1537309 R nitrate reductase 2 (NRZ), delta subunit (assembly subunit) complement(1536614..1537309) Escherichia coli str. K-12 substr. MG1655 946032 NP_415984.1 CDS narY NC_000913.3 1537309 1538853 R nitrate reductase 2 (NRZ), beta subunit complement(1537309..1538853) Escherichia coli str. K-12 substr. MG1655 946034 NP_415985.1 CDS narZ NC_000913.3 1538850 1542590 R nitrate reductase 2 (NRZ), alpha subunit complement(1538850..1542590) Escherichia coli str. K-12 substr. MG1655 945999 NP_415986.1 CDS narU NC_000913.3 1542672 1544060 R nitrite extrusion protein 2; nitrate/nitrite transporter complement(1542672..1544060) Escherichia coli str. K-12 substr. MG1655 945799 b1471 CDS yddK NC_000913.3 1544384 1545714 R pseudogene, leucine-rich protein; putative glycoportein; complement(join(1544384..1544764,1544764..1545714)) Escherichia coli str. K-12 substr. MG1655 947312 b1472 CDS yddL NC_000913.3 1545750 1546028 R putative lipoprotein;putative membrane; Not classified; putative outer membrane porin protein; complement(1545750..1546028) Escherichia coli str. K-12 substr. MG1655 945737 NP_415990.5 CDS yddG NC_000913.3 1546288 1547169 R aromatic amino acid exporter complement(1546288..1547169) Escherichia coli str. K-12 substr. MG1655 945942 NP_415991.1 CDS fdnG NC_000913.3 1547401 1550448 D formate dehydrogenase-N, nitrate-inducible, alpha subunit; formate dehydrogenase-N, alpha subunit, nitrate-inducible 1547401..1550448 Escherichia coli str. K-12 substr. MG1655 946035 NP_415992.1 CDS fdnH NC_000913.3 1550461 1551345 D formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit; formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible 1550461..1551345 Escherichia coli str. K-12 substr. MG1655 948794 NP_415993.1 CDS fdnI NC_000913.3 1551338 1551991 D formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit; formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible 1551338..1551991 Escherichia coli str. K-12 substr. MG1655 946038 NP_415994.4 CDS yddM NC_000913.3 1552398 1552682 R putative DNA-binding transcriptional regulator complement(1552398..1552682) Escherichia coli str. K-12 substr. MG1655 946040 NP_415995.4 CDS adhP NC_000913.3 1552828 1553838 R alcohol dehydrogenase; ethanol-active dehydrogenase/acetaldehyde-active reductase complement(1552828..1553838) Escherichia coli str. K-12 substr. MG1655 946036 NP_415996.2 CDS maeA NC_000913.3 1553972 1555669 R NAD-linked malate dehydrogenase (malic enzyme); malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) complement(1553972..1555669) Escherichia coli str. K-12 substr. MG1655 946031 NP_415997.1 CDS sra NC_000913.3 1555826 1555963 R stationary phase-induced ribosome-associated protein; stationary-phase-induced ribosome-associated protein complement(1555826..1555963) Escherichia coli str. K-12 substr. MG1655 946030 NP_415998.4 CDS bdm NC_000913.3 1556065 1556280 R biofilm-dependent modulation protein complement(1556065..1556280) Escherichia coli str. K-12 substr. MG1655 946041 NP_415999.1 CDS osmC NC_000913.3 1556625 1557056 D osmotically inducible protein; lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance; salt-shock inducible membrane protein; peroxiredoxin 1556625..1557056 Escherichia coli str. K-12 substr. MG1655 946043 NP_416000.1 CDS ddpF NC_000913.3 1557112 1558038 R ATP-binding component of ABC superfamily; D,D-dipeptide permease system, ATP-binding component complement(1557112..1558038) Escherichia coli str. K-12 substr. MG1655 946020 NP_416001.1 CDS ddpD NC_000913.3 1558031 1559017 R ATP-binding component of ABC superfamily; D,D-dipeptide permease system, ATP-binding component complement(1558031..1559017) Escherichia coli str. K-12 substr. MG1655 946002 NP_416002.1 CDS ddpC NC_000913.3 1559014 1559910 R membrane component of ABC superfamily; D-ala-D-ala transporter subunit complement(1559014..1559910) Escherichia coli str. K-12 substr. MG1655 946028 NP_416003.1 CDS ddpB NC_000913.3 1559907 1560929 R membrane component of ABC superfamily; D-ala-D-ala transporter subunit complement(1559907..1560929) Escherichia coli str. K-12 substr. MG1655 946044 NP_416004.1 CDS ddpA NC_000913.3 1560931 1562481 R periplasmic-binding component of ABC superfamily; D-ala-D-a la transporter subunit complement(1560931..1562481) Escherichia coli str. K-12 substr. MG1655 946052 NP_416005.1 CDS ddpX NC_000913.3 1562495 1563076 R D-ala-D-ala dipeptidase, Zn-dependent complement(1562495..1563076) Escherichia coli str. K-12 substr. MG1655 945532 NP_416006.4 CDS dosP NC_000913.3 1563334 1565733 R oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator complement(1563334..1565733) Escherichia coli str. K-12 substr. MG1655 945815 NP_416007.3 CDS dosC NC_000913.3 1565758 1567140 R diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator complement(1565758..1567140) Escherichia coli str. K-12 substr. MG1655 945835 NP_416008.1 CDS yddW NC_000913.3 1567504 1568823 R liprotein, glycosyl hydrolase homolog complement(1567504..1568823) Escherichia coli str. K-12 substr. MG1655 945975 NP_416009.1 CDS gadC NC_000913.3 1568954 1570489 R acid sensitivity protein, putative transporter; glutamate:gamma-aminobutyric acid antiporter complement(1568954..1570489) Escherichia coli str. K-12 substr. MG1655 946057 NP_416010.1 CDS gadB NC_000913.3 1570645 1572045 R glutamate decarboxylase isozyme; glutamate decarboxylase B, PLP-dependent complement(1570645..1572045) Escherichia coli str. K-12 substr. MG1655 946058 NP_416011.1 CDS pqqL NC_000913.3 1572407 1575202 R putative zinc protease; putative periplasmic M16 family zinc metalloendopeptidase complement(1572407..1575202) Escherichia coli str. K-12 substr. MG1655 946059 NP_416012.1 CDS yddB NC_000913.3 1575247 1577619 R putative TonB-dependent outer membrane receptor complement(1575247..1577619) Escherichia coli str. K-12 substr. MG1655 945961 NP_416013.1 CDS yddA NC_000913.3 1577657 1579342 R putative multidrug transporter subunit of ABC superfamily, membrane component/ATP-binding component complement(1577657..1579342) Escherichia coli str. K-12 substr. MG1655 945945 NP_416014.4 CDS ydeM NC_000913.3 1579633 1580790 R putative enzyme; putative YdeN-specific sulfatase-maturating enzyme complement(1579633..1580790) Escherichia coli str. K-12 substr. MG1655 945981 NP_416015.2 CDS ydeN NC_000913.3 1580842 1582524 R putative sulfatase; putative Ser-type periplasmic non-aryl sulfatase complement(1580842..1582524) Escherichia coli str. K-12 substr. MG1655 945957 NP_416016.1 CDS ydeO NC_000913.3 1582926 1583687 R putative ARAC-type regulatory protein; UV-inducible global regulator, EvgA-, GadE-dependent complement(1582926..1583687) Escherichia coli str. K-12 substr. MG1655 945922 NP_416017.1 CDS safA NC_000913.3 1583762 1583959 R two-component system connector membrane protein, EvgSA to PhoQP complement(1583762..1583959) Escherichia coli str. K-12 substr. MG1655 946061 NP_416018.1 CDS ydeP NC_000913.3 1584207 1586486 R putative oxidoreductase, major subunit; putative oxidoreductase complement(1584207..1586486) Escherichia coli str. K-12 substr. MG1655 946055 NP_416019.1 CDS ydeQ NC_000913.3 1586820 1587734 R putative adhesin; similar to FimH protein; putative fimbrial-like adhesin protein complement(1586820..1587734) Escherichia coli str. K-12 substr. MG1655 946050 NP_416020.1 CDS ydeR NC_000913.3 1587793 1588296 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(1587793..1588296) Escherichia coli str. K-12 substr. MG1655 946049 NP_416021.1 CDS ydeS NC_000913.3 1588309 1588839 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(1588309..1588839) Escherichia coli str. K-12 substr. MG1655 946047 b1505 CDS ydeT NC_000913.3 1588853 1590079 R pseudogene; putative outer membrane protein; complement(1588853..1590079) Escherichia coli str. K-12 substr. MG1655 946042 b1506 CDS yneL NC_000913.3 1590334 1590536 R pseudogene, AraC family; complement(join(1590334..1590426,1590426..1590536)) Escherichia coli str. K-12 substr. MG1655 946063 NP_416024.1 CDS hipA NC_000913.3 1590854 1592176 R persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator; inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase complement(1590854..1592176) Escherichia coli str. K-12 substr. MG1655 946064 NP_416025.1 CDS hipB NC_000913.3 1592176 1592442 R persistence to inhibition of murein or DNA biosynthesis; regulatory protein; antitoxin of HipAB toxin-antitoxin system complement(1592176..1592442) Escherichia coli str. K-12 substr. MG1655 946065 b4696 CDS yneO NC_000913.3 1592665 1597987 R pseudogene, AidA homolog; complement(1592665..1597987) Escherichia coli str. K-12 substr. MG1655 7751623 NP_416028.3 CDS lsrK NC_000913.3 1598617 1600209 R autoinducer-2 (AI-2) kinase complement(1598617..1600209) Escherichia coli str. K-12 substr. MG1655 946069 NP_416029.1 CDS lsrR NC_000913.3 1600288 1601241 R lsr operon transcriptional repressor complement(1600288..1601241) Escherichia coli str. K-12 substr. MG1655 946070 NP_416030.1 CDS lsrA NC_000913.3 1601490 1603025 D autoinducer-2 (AI-2)-transporting ATPase; autoinducer 2 import ATP-binding protein 1601490..1603025 Escherichia coli str. K-12 substr. MG1655 945680 NP_416031.1 CDS lsrC NC_000913.3 1603019 1604047 D autoinducer-2 (AI-2)-transporting membrane channel protein; membrane component of ABC superfamily; autoinducer 2 import system permease protein 1603019..1604047 Escherichia coli str. K-12 substr. MG1655 946105 NP_416032.1 CDS lsrD NC_000913.3 1604047 1605039 D autoinducer-2 (AI-2)-transporting membrane channel protein; membrane component of ABC superfamily; autoinducer 2 import system permease protein 1604047..1605039 Escherichia coli str. K-12 substr. MG1655 946264 NP_416033.1 CDS lsrB NC_000913.3 1605051 1606073 D periplasmic autoinducer-2 (AI-2) binding protein; periplasmic-binding component of ABC superfamily; autoinducer 2-binding protein 1605051..1606073 Escherichia coli str. K-12 substr. MG1655 945418 NP_416034.1 CDS lsrF NC_000913.3 1606100 1606975 D putative autoinducer-2 (AI-2) aldolase 1606100..1606975 Escherichia coli str. K-12 substr. MG1655 946071 NP_416035.1 CDS lsrG NC_000913.3 1606999 1607289 D autoinducer-2 (AI-2) degrading protein LsrG 1606999..1607289 Escherichia coli str. K-12 substr. MG1655 946073 NP_416036.1 CDS tam NC_000913.3 1607346 1608104 D trans-aconitate 2-methyltransferase; trans-aconitate methyltransferase 1607346..1608104 Escherichia coli str. K-12 substr. MG1655 946074 NP_416037.2 CDS yneE NC_000913.3 1608108 1609022 R bestrophin family putative inner membrane protein complement(1608108..1609022) Escherichia coli str. K-12 substr. MG1655 946188 YP_025302.1 CDS uxaB NC_000913.3 1609229 1610680 R altronate oxidoreductase; altronate oxidoreductase, NAD-dependent complement(1609229..1610680) Escherichia coli str. K-12 substr. MG1655 945542 NP_416039.1 CDS yneF NC_000913.3 1610907 1611854 R putative membrane-bound diguanylate cyclase complement(1610907..1611854) Escherichia coli str. K-12 substr. MG1655 947422 NP_416040.1 CDS yneG NC_000913.3 1611966 1612325 R DUF4186 family protein complement(1611966..1612325) Escherichia coli str. K-12 substr. MG1655 946171 NP_416041.1 CDS glsB NC_000913.3 1612325 1613251 R putative glutaminase; glutaminase 2 complement(1612325..1613251) Escherichia coli str. K-12 substr. MG1655 944973 NP_416042.2 CDS sad NC_000913.3 1613315 1614703 R putative aldehyde dehydrogenase; succinate semialdehyde dehydrogenase, NAD(P)+-dependent complement(1613315..1614703) Escherichia coli str. K-12 substr. MG1655 947440 NP_416043.1 CDS yneJ NC_000913.3 1614804 1615685 D putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 1614804..1615685 Escherichia coli str. K-12 substr. MG1655 946079 NP_416044.1 CDS yneK NC_000913.3 1615763 1616878 D uncharacterized protein 1615763..1616878 Escherichia coli str. K-12 substr. MG1655 946080 NP_416045.1 CDS ydeA NC_000913.3 1617028 1618218 D L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein (MFS family); arabinose efflux transporter, arabinose-inducible 1617028..1618218 Escherichia coli str. K-12 substr. MG1655 947218 NP_416046.1 CDS marC NC_000913.3 1618243 1618908 R UPF0056 family inner membrane protein complement(1618243..1618908) Escherichia coli str. K-12 substr. MG1655 947132 NP_416047.4 CDS marR NC_000913.3 1619120 1619554 D multiple antibiotic resistance protein; repressor of mar operon; transcriptional repressor of multiple antibiotic resistance 1619120..1619554 Escherichia coli str. K-12 substr. MG1655 945825 NP_416048.2 CDS marA NC_000913.3 1619574 1619957 D multiple antibiotic resistance; transcriptional activator of defense systems; multiple antibiotic resistance transcriptional regulator 1619574..1619957 Escherichia coli str. K-12 substr. MG1655 947613 NP_416049.1 CDS marB NC_000913.3 1619989 1620207 D multiple antibiotic resistance protein; mar operon regulator, periplasmic 1619989..1620207 Escherichia coli str. K-12 substr. MG1655 946184 NP_416050.4 CDS eamA NC_000913.3 1620238 1621137 R amino acid metabolite efflux pump; cysteine and O-acetyl-L-serine efflux system complement(1620238..1621137) Escherichia coli str. K-12 substr. MG1655 946081 NP_416051.1 CDS ydeE NC_000913.3 1621332 1622519 D putative transport protein; putative transporter 1621332..1622519 Escherichia coli str. K-12 substr. MG1655 946083 YP_001165319.1 CDS yneM NC_000913.3 1622646 1622741 D inner membrane-associated protein 1622646..1622741 Escherichia coli str. K-12 substr. MG1655 5061497 NP_416052.1 CDS dgcZ NC_000913.3 1622960 1623850 R diguanylate cyclase, zinc-sensing complement(1622960..1623850) Escherichia coli str. K-12 substr. MG1655 946075 NP_416054.1 CDS ydeI NC_000913.3 1624105 1624497 R hydrogen peroxide resistance OB fold protein; putative periplasmic protein complement(1624105..1624497) Escherichia coli str. K-12 substr. MG1655 946068 NP_416055.1 CDS ydeJ NC_000913.3 1624773 1625291 D inactive PncC family protein 1624773..1625291 Escherichia coli str. K-12 substr. MG1655 946067 NP_416056.1 CDS dcp NC_000913.3 1625335 1627380 R dipeptidyl carboxypeptidase II complement(1625335..1627380) Escherichia coli str. K-12 substr. MG1655 946084 NP_416057.1 CDS ydfG NC_000913.3 1627517 1628263 D putative oxidoreductase; NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase 1627517..1628263 Escherichia coli str. K-12 substr. MG1655 946085 NP_416058.1 CDS rspR NC_000913.3 1628352 1629038 D transcriptional repressor for rspAB 1628352..1629038 Escherichia coli str. K-12 substr. MG1655 946087 NP_416059.1 CDS ydfZ NC_000913.3 1629215 1629418 D selenoprotein, function unknown 1629215..1629418 Escherichia coli str. K-12 substr. MG1655 948796 NP_416060.1 CDS ydfI NC_000913.3 1629453 1630913 R putative oxidoreductase; putative NAD-dependent D-mannonate oxidoreductase complement(1629453..1630913) Escherichia coli str. K-12 substr. MG1655 945861 b4600 CDS ydfJ NC_000913.3 1631002 1652838 R pseudogene, MFS transporter family; interrupted by Qin prophage;Phage or Prophage Related; putative transport protein; complement(join(1631002..1632285,1652755..1652838)) Escherichia coli str. K-12 substr. MG1655 944802 NP_416062.2 CDS ydfK NC_000913.3 1633072 1633305 D cold shock protein, function unknown, Qin prophage 1633072..1633305 Escherichia coli str. K-12 substr. MG1655 947451 NP_416063.1 CDS pinQ NC_000913.3 1633622 1634212 D Qin prophage; putative site-specific recombinase 1633622..1634212 Escherichia coli str. K-12 substr. MG1655 946088 NP_416064.1 CDS tfaQ NC_000913.3 1634310 1634885 R tail fiber assembly protein homolog from lambdoid prophage Qin; Qin prophage; putative tail fiber assembly protein complement(1634310..1634885) Escherichia coli str. K-12 substr. MG1655 946060 NP_416065.1 CDS stfQ NC_000913.3 1634885 1635847 R Qin prophage; putative side tail fiber assembly protein complement(1634885..1635847) Escherichia coli str. K-12 substr. MG1655 946098 b1548 CDS nohQ NC_000913.3 1635840 1636367 R pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin; complement(1635840..1636367) Escherichia coli str. K-12 substr. MG1655 946021 YP_588454.1 CDS ynfO NC_000913.3 1636756 1636989 D uncharacterized protein, Qin prophage 1636756..1636989 Escherichia coli str. K-12 substr. MG1655 1450267 NP_416067.2 CDS ydfO NC_000913.3 1637047 1637457 D Qin prophage; uncharacterized protein 1637047..1637457 Escherichia coli str. K-12 substr. MG1655 945992 NP_416068.2 CDS gnsB NC_000913.3 1637609 1637782 R Qin prophage; multicopy suppressor of secG(Cs) and fabA6(Ts) complement(1637609..1637782) Escherichia coli str. K-12 substr. MG1655 946054 NP_416069.2 CDS ynfN NC_000913.3 1637954 1638109 R Qin prophage; cold shock-induced protein complement(1637954..1638109) Escherichia coli str. K-12 substr. MG1655 946097 NP_416070.1 CDS cspI NC_000913.3 1638455 1638667 R cold shock-like protein; Qin prophage; cold shock protein complement(1638455..1638667) Escherichia coli str. K-12 substr. MG1655 946099 NP_416071.1 CDS rzpQ NC_000913.3 1639030 1639527 R completely contained in another CDS; Rz-like protein, Qin prophage complement(1639030..1639527) Escherichia coli str. K-12 substr. MG1655 946101 YP_002791241.1 CDS rzoQ NC_000913.3 1639080 1639334 R completely contained in another CDS; putative Rz1-like lipoprotein, Qin prophage complement(1639080..1639334) Escherichia coli str. K-12 substr. MG1655 7751615 NP_416072.1 CDS rrrQ NC_000913.3 1639524 1640057 R Qin prophage; putative lysozyme complement(1639524..1640057) Escherichia coli str. K-12 substr. MG1655 946100 NP_416073.1 CDS ydfR NC_000913.3 1640054 1640365 R Qin prophage; uncharacterized protein complement(1640054..1640365) Escherichia coli str. K-12 substr. MG1655 946095 NP_416074.4 CDS essQ NC_000913.3 1640370 1640585 R Qin prophage; putative S lysis protein complement(1640370..1640585) Escherichia coli str. K-12 substr. MG1655 946093 NP_416075.1 CDS cspB NC_000913.3 1641339 1641554 R Qin prophage; cold shock protein complement(1641339..1641554) Escherichia coli str. K-12 substr. MG1655 946091 NP_416076.1 CDS cspF NC_000913.3 1641855 1642067 D Qin prophage; cold shock protein 1641855..1642067 Escherichia coli str. K-12 substr. MG1655 946090 NP_416077.4 CDS quuQ NC_000913.3 1642489 1643241 R Qin prophage; putative antitermination protein Q complement(1642489..1643241) Escherichia coli str. K-12 substr. MG1655 946103 NP_416078.4 CDS ydfU NC_000913.3 1643255 1644304 R Qin prophage; uncharacterized protein complement(1643255..1644304) Escherichia coli str. K-12 substr. MG1655 946108 NP_416079.1 CDS rem NC_000913.3 1644651 1644902 R Qin prophage; uncharacterized protein complement(1644651..1644902) Escherichia coli str. K-12 substr. MG1655 946109 NP_416080.1 CDS hokD NC_000913.3 1645119 1645274 R polypeptide destructive to membrane potential; hokD (relF) regulatory elements are deleted, and the gene is fused to the relBE transcript; evolutionary relic?; Qin prophage; small toxic polypeptide complement(1645119..1645274) Escherichia coli str. K-12 substr. MG1655 948616 NP_416081.1 CDS relE NC_000913.3 1645346 1645633 R Qin prophage; toxin of the RelE-RelB toxin-antitoxin system complement(1645346..1645633) Escherichia coli str. K-12 substr. MG1655 947549 NP_416082.1 CDS relB NC_000913.3 1645633 1645872 R negative regulator of translation; Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor complement(1645633..1645872) Escherichia coli str. K-12 substr. MG1655 948308 NP_416083.1 CDS ydfV NC_000913.3 1645897 1646202 D Qin prophage; uncharacterized protein 1645897..1646202 Escherichia coli str. K-12 substr. MG1655 948801 NP_416084.1 CDS flxA NC_000913.3 1646405 1646737 D Qin prophage; uncharacterized protein 1646405..1646737 Escherichia coli str. K-12 substr. MG1655 947392 b1567 CDS intK NC_000913.3 1647174 1647356 R pseudogene, integrase fragment, Qin prophage;Phage or Prophage Related; complement(1647174..1647356) Escherichia coli str. K-12 substr. MG1655 946111 b1568 CDS ydfX NC_000913.3 1647358 1647636 R pseudogene, Qin prophage;Phage or Prophage Related; complement(1647358..1647636) Escherichia coli str. K-12 substr. MG1655 946112 NP_416087.1 CDS dicC NC_000913.3 1647620 1647850 R regulator of dicB; Qin prophage; DNA-binding transcriptional regulator for DicB complement(1647620..1647850) Escherichia coli str. K-12 substr. MG1655 946120 NP_416088.1 CDS dicA NC_000913.3 1647934 1648341 D regulator of dicB; Qin prophage; putative regulator for DicB 1647934..1648341 Escherichia coli str. K-12 substr. MG1655 946241 NP_416089.1 CDS ydfA NC_000913.3 1648508 1648663 D Qin prophage; uncharacterized protein 1648508..1648663 Escherichia coli str. K-12 substr. MG1655 946082 NP_416090.2 CDS ydfB NC_000913.3 1648665 1648793 D Qin prophage; uncharacterized protein 1648665..1648793 Escherichia coli str. K-12 substr. MG1655 946176 NP_416091.1 CDS ydfC NC_000913.3 1648823 1649041 D uncharacterized protein, Qin prophage 1648823..1649041 Escherichia coli str. K-12 substr. MG1655 946107 NP_416092.1 CDS dicB NC_000913.3 1649609 1649797 D inhibition of cell division; Qin prophage; cell division inhibition protein 1649609..1649797 Escherichia coli str. K-12 substr. MG1655 946110 NP_416093.1 CDS ydfD NC_000913.3 1649794 1649985 D Qin prophage; uncharacterized protein 1649794..1649985 Escherichia coli str. K-12 substr. MG1655 946102 b1577 CDS ydfE NC_000913.3 1650078 1650842 D Qin prophage; pseudogene;Phage or Prophage Related; 1650078..1650842 Escherichia coli str. K-12 substr. MG1655 946113 b1578 CDS insD1 NC_000913.3 1650845 1651537 D IS2 transposase TnpB;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; 1650845..1651537 Escherichia coli str. K-12 substr. MG1655 946118 b1579 CDS intQ NC_000913.3 1651551 1652708 D pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related; 1651551..1652708 Escherichia coli str. K-12 substr. MG1655 946130 NP_416097.1 CDS rspB NC_000913.3 1652896 1653915 R starvation sensing protein; putative Zn-dependent NAD(P)-binding oxidoreductase complement(1652896..1653915) Escherichia coli str. K-12 substr. MG1655 946127 NP_416098.1 CDS rspA NC_000913.3 1653927 1655141 R starvation sensing protein; bifunctional D-altronate/D-mannonate dehydratase complement(1653927..1655141) Escherichia coli str. K-12 substr. MG1655 946126 NP_416099.1 CDS ynfA NC_000913.3 1655347 1655673 R UPF0060 family inner membrane protein complement(1655347..1655673) Escherichia coli str. K-12 substr. MG1655 946125 NP_416100.1 CDS ynfB NC_000913.3 1655808 1656149 D UPF0482 family putative periplasmic protein 1655808..1656149 Escherichia coli str. K-12 substr. MG1655 946119 NP_416101.1 CDS speG NC_000913.3 1656184 1656744 D spermidine N1-acetyltransferase 1656184..1656744 Escherichia coli str. K-12 substr. MG1655 946117 NP_416102.2 CDS ynfC NC_000913.3 1656747 1657457 R UPF0257 family lipoprotein complement(1656747..1657457) Escherichia coli str. K-12 substr. MG1655 946131 NP_416103.2 CDS ynfD NC_000913.3 1657565 1657870 D DUF1161 family periplasmic protein 1657565..1657870 Escherichia coli str. K-12 substr. MG1655 946133 NP_416104.1 CDS ynfE NC_000913.3 1658069 1660495 D putative selenate reductase, periplasmic 1658069..1660495 Escherichia coli str. K-12 substr. MG1655 946135 NP_416105.4 CDS ynfF NC_000913.3 1660556 1662979 D S- and N-oxide reductase, A subunit, periplasmic 1660556..1662979 Escherichia coli str. K-12 substr. MG1655 945268 NP_416106.1 CDS ynfG NC_000913.3 1662990 1663607 D oxidoreductase, Fe-S subunit 1662990..1663607 Escherichia coli str. K-12 substr. MG1655 945638 NP_416107.1 CDS ynfH NC_000913.3 1663609 1664463 D oxidoreductase, membrane subunit 1663609..1664463 Escherichia coli str. K-12 substr. MG1655 945822 NP_416108.2 CDS dmsD NC_000913.3 1664506 1665120 D twin-argninine leader-binding protein for DmsA and TorA 1664506..1665120 Escherichia coli str. K-12 substr. MG1655 945987 NP_416109.2 CDS clcB NC_000913.3 1665315 1666571 D H(+)/Cl(-) exchange transporter 1665315..1666571 Escherichia coli str. K-12 substr. MG1655 947179 NP_416110.4 CDS ynfK NC_000913.3 1666524 1667219 R putative dethiobiotin synthetase complement(1666524..1667219) Escherichia coli str. K-12 substr. MG1655 944927 NP_416111.1 CDS mlc NC_000913.3 1667344 1668564 R putative NAGC-like transcriptional regulator; glucosamine anaerobic growth regulon transcriptional repressor; autorepressor complement(1667344..1668564) Escherichia coli str. K-12 substr. MG1655 945510 NP_416112.1 CDS ynfL NC_000913.3 1668699 1669592 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(1668699..1669592) Escherichia coli str. K-12 substr. MG1655 946136 NP_416113.1 CDS ynfM NC_000913.3 1669699 1670952 D putative transport protein; putative arabinose efflux transporter 1669699..1670952 Escherichia coli str. K-12 substr. MG1655 946138 NP_416114.2 CDS asr NC_000913.3 1671376 1671684 D acid shock protein; acid shock-inducible periplasmic protein 1671376..1671684 Escherichia coli str. K-12 substr. MG1655 945103 YP_001165320.1 CDS ydgU NC_000913.3 1671777 1671860 D stationary phase-induced protein 1671777..1671860 Escherichia coli str. K-12 substr. MG1655 5061510 NP_416115.1 CDS ydgD NC_000913.3 1671960 1672781 D putative peptidase 1671960..1672781 Escherichia coli str. K-12 substr. MG1655 946436 NP_416116.1 CDS mdtI NC_000913.3 1672820 1673149 R possible chaperone; multidrug efflux system transporter complement(1672820..1673149) Escherichia coli str. K-12 substr. MG1655 947333 NP_416117.1 CDS mdtJ NC_000913.3 1673136 1673501 R possible chaperone; multidrug efflux system transporter complement(1673136..1673501) Escherichia coli str. K-12 substr. MG1655 946139 NP_416118.1 CDS tqsA NC_000913.3 1673913 1674947 D putative transport protein; pheromone AI-2 transporter 1673913..1674947 Escherichia coli str. K-12 substr. MG1655 946142 NP_416119.1 CDS pntB NC_000913.3 1674972 1676360 R pyridine nucleotide transhydrogenase, beta subunit complement(1674972..1676360) Escherichia coli str. K-12 substr. MG1655 946144 NP_416120.1 CDS pntA NC_000913.3 1676371 1677903 R pyridine nucleotide transhydrogenase, alpha subunit complement(1676371..1677903) Escherichia coli str. K-12 substr. MG1655 946628 NP_416121.1 CDS ydgH NC_000913.3 1678427 1679371 D DUF1471 family periplasmic protein 1678427..1679371 Escherichia coli str. K-12 substr. MG1655 945117 NP_416122.1 CDS ydgI NC_000913.3 1679557 1680939 D putative arginine/ornithine antiporter; putative arginine/ornithine antiporter transporter 1679557..1680939 Escherichia coli str. K-12 substr. MG1655 945159 NP_416123.1 CDS folM NC_000913.3 1680976 1681698 D putative oxidoreductase; dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme 1680976..1681698 Escherichia coli str. K-12 substr. MG1655 949096 NP_416124.1 CDS ydgC NC_000913.3 1681695 1682030 R GlpM family inner membrane protein complement(1681695..1682030) Escherichia coli str. K-12 substr. MG1655 945156 NP_416125.2 CDS rstA NC_000913.3 1682159 1682878 D response transcriptional regulatory protein (RstB sensor); response regulator of RstAB two-component system, low Mg-responsive via PhoQP 1682159..1682878 Escherichia coli str. K-12 substr. MG1655 946199 NP_416126.1 CDS rstB NC_000913.3 1682882 1684183 D sensor histidine protein kinase (RstA regulator); sensory histidine kinase of RstAB two-component system, low Mg-responsive via PhoQP 1682882..1684183 Escherichia coli str. K-12 substr. MG1655 948870 NP_416127.1 CDS tus NC_000913.3 1684259 1685188 D DNA-binding protein; inhibition of replication at Ter sites; inhibitor of replication at Ter, DNA-binding protein 1684259..1685188 Escherichia coli str. K-12 substr. MG1655 945135 NP_416128.1 CDS fumC NC_000913.3 1685185 1686588 R fumarase C= fumarate hydratase Class II; isozyme; fumarate hydratase (fumarase C),aerobic Class II complement(1685185..1686588) Escherichia coli str. K-12 substr. MG1655 946147 NP_416129.1 CDS fumA NC_000913.3 1686731 1688377 R fumarase A = fumarate hydratase Class I; aerobic isozyme; fumarate hydratase (fumarase A), aerobic Class I complement(1686731..1688377) Escherichia coli str. K-12 substr. MG1655 946826 NP_416130.3 CDS manA NC_000913.3 1688576 1689751 D mannose-6-phosphate isomerase 1688576..1689751 Escherichia coli str. K-12 substr. MG1655 944840 NP_416131.1 CDS ydgA NC_000913.3 1689852 1691360 D DUF945 family protein 1689852..1691360 Escherichia coli str. K-12 substr. MG1655 946172 NP_416132.2 CDS uidC NC_000913.3 1691586 1692851 R membrane-associated protein; putative outer membrane porin for beta-glucuronides porin protein complement(1691586..1692851) Escherichia coli str. K-12 substr. MG1655 944820 NP_416133.1 CDS uidB NC_000913.3 1692890 1694263 R glucuronide permease; glucuronide transporter complement(1692890..1694263) Escherichia coli str. K-12 substr. MG1655 947484 NP_416134.1 CDS uidA NC_000913.3 1694260 1696071 R beta-D-glucuronidase complement(1694260..1696071) Escherichia coli str. K-12 substr. MG1655 946149 NP_416135.1 CDS uidR NC_000913.3 1696462 1697052 R repressor for uid operon; transcriptional repressor complement(1696462..1697052) Escherichia coli str. K-12 substr. MG1655 946150 NP_416136.1 CDS hdhA NC_000913.3 1697273 1698040 R NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids; 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent complement(1697273..1698040) Escherichia coli str. K-12 substr. MG1655 946151 NP_416137.1 CDS malI NC_000913.3 1698152 1699180 R maltose regulon regulatory protein; transcriptional repressor of Mal regulon complement(1698152..1699180) Escherichia coli str. K-12 substr. MG1655 947104 NP_416138.1 CDS malX NC_000913.3 1699355 1700947 D PTS system, maltose and glucose-specific IIABC component; fused maltose and glucose-specific PTS enzymes: IIB component, IIC component 1699355..1700947 Escherichia coli str. K-12 substr. MG1655 946009 NP_416139.1 CDS malY NC_000913.3 1700957 1702129 D cystathionine beta-lyase; maltose regulon modulator; bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon 1700957..1702129 Escherichia coli str. K-12 substr. MG1655 945937 NP_416140.1 CDS add NC_000913.3 1702233 1703234 D adenosine deaminase 1702233..1703234 Escherichia coli str. K-12 substr. MG1655 945851 NP_416141.4 CDS ydgJ NC_000913.3 1703268 1704308 R putative oxidoreductase complement(1703268..1704308) Escherichia coli str. K-12 substr. MG1655 947164 YP_025303.1 CDS blr NC_000913.3 1704551 1704676 D beta-lactam resistance protein; beta-lactam resistance membrane protein; divisome-associated protein 1704551..1704676 Escherichia coli str. K-12 substr. MG1655 2847682 NP_416142.1 CDS cnu NC_000913.3 1704949 1705164 D nucleoid-associated oriC-binding protein; H-NS and StpA stabilizing factor 1704949..1705164 Escherichia coli str. K-12 substr. MG1655 946152 NP_416143.2 CDS ydgK NC_000913.3 1705250 1705690 D DUF2569 family inner membrane protein 1705250..1705690 Escherichia coli str. K-12 substr. MG1655 946154 NP_416144.1 CDS rsxA NC_000913.3 1705767 1706348 D SoxR iron-sulfur cluster reduction factor component; inner membrane protein of electron transport complex 1705767..1706348 Escherichia coli str. K-12 substr. MG1655 946148 NP_416145.1 CDS rsxB NC_000913.3 1706348 1706926 D SoxR iron-sulfur cluster reduction factor component; putative iron-sulfur protein 1706348..1706926 Escherichia coli str. K-12 substr. MG1655 946146 NP_416146.1 CDS rsxC NC_000913.3 1706919 1709141 D SoxR iron-sulfur cluster reduction factor component; putative membrane-associated NADH oxidoreductase of electron transport complex 1706919..1709141 Escherichia coli str. K-12 substr. MG1655 946137 NP_416147.1 CDS rsxD NC_000913.3 1709142 1710200 D electron transport complex protein; SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex 1709142..1710200 Escherichia coli str. K-12 substr. MG1655 946134 NP_416148.1 CDS rsxG NC_000913.3 1710204 1710824 D SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex 1710204..1710824 Escherichia coli str. K-12 substr. MG1655 946158 NP_416149.1 CDS rsxE NC_000913.3 1710828 1711523 D electron transport complex protein; SoxR iron-sulfur cluster reduction factor component; electron transport inner membrane NADH-quinone reductase 1710828..1711523 Escherichia coli str. K-12 substr. MG1655 947509 NP_416150.1 CDS nth NC_000913.3 1711523 1712158 D endonuclease III; specific for apurinic and/or apyrimidinic sites; DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) 1711523..1712158 Escherichia coli str. K-12 substr. MG1655 947122 NP_416151.1 CDS dtpA NC_000913.3 1712769 1714271 D putative transport protein; dipeptide and tripeptide permease A 1712769..1714271 Escherichia coli str. K-12 substr. MG1655 947436 NP_416152.1 CDS gstA NC_000913.3 1714377 1714982 D glutathionine S-transferase 1714377..1714982 Escherichia coli str. K-12 substr. MG1655 945758 NP_416153.1 CDS pdxY NC_000913.3 1715026 1715889 R pyridoxal kinase 2 / pyridoxine kinase; pyridoxamine kinase complement(1715026..1715889) Escherichia coli str. K-12 substr. MG1655 946162 NP_416154.1 CDS tyrS NC_000913.3 1715948 1717222 R tyrosine tRNA synthetase; tyrosyl-tRNA synthetase complement(1715948..1717222) Escherichia coli str. K-12 substr. MG1655 948855 NP_416155.1 CDS pdxH NC_000913.3 1717351 1718007 R pyridoxinephosphate oxidase; pyridoxine 5'-phosphate oxidase complement(1717351..1718007) Escherichia coli str. K-12 substr. MG1655 946806 NP_416156.4 CDS mliC NC_000913.3 1718066 1718395 R inhibitor of c-type lysozyme, membrane-bound; putative lipoprotein complement(1718066..1718395) Escherichia coli str. K-12 substr. MG1655 946811 NP_416157.1 CDS anmK NC_000913.3 1718493 1719602 R anhydro-N-acetylmuramic acid kinase complement(1718493..1719602) Escherichia coli str. K-12 substr. MG1655 946810 YP_025304.1 CDS slyB NC_000913.3 1719876 1720343 D putative outer membrane protein; outer membrane lipoprotein 1719876..1720343 Escherichia coli str. K-12 substr. MG1655 946801 NP_416159.2 CDS slyA NC_000913.3 1720390 1720824 R transcriptional regulator for cryptic hemolysin; global transcriptional regulator complement(1720390..1720824) Escherichia coli str. K-12 substr. MG1655 946167 NP_416160.1 CDS ydhI NC_000913.3 1721025 1721261 D DUF1656 family putative inner membrane efflux pump associated protein 1721025..1721261 Escherichia coli str. K-12 substr. MG1655 947559 NP_416161.4 CDS ydhJ NC_000913.3 1721264 1722121 D putative membrane protein; putative membrane fusion protein (MFP) of YdhJK efflux pump 1721264..1722121 Escherichia coli str. K-12 substr. MG1655 946499 NP_416162.1 CDS ydhK NC_000913.3 1722121 1724133 D putative efflux protein (PET) component of YdhJK efflux pump 1722121..1724133 Escherichia coli str. K-12 substr. MG1655 946528 NP_416163.1 CDS sodC NC_000913.3 1724134 1724655 R superoxide dismutase precursor (Cu-Zn); superoxide dismutase, Cu, Zn, periplasmic complement(1724134..1724655) Escherichia coli str. K-12 substr. MG1655 945343 YP_025305.1 CDS ydhF NC_000913.3 1724736 1725632 R putative oxidoreductase complement(1724736..1725632) Escherichia coli str. K-12 substr. MG1655 946960 NP_416165.2 CDS ydhL NC_000913.3 1725681 1725920 R DUF1289 family protein complement(1725681..1725920) Escherichia coli str. K-12 substr. MG1655 946168 NP_416166.3 CDS nemR NC_000913.3 1726023 1726622 D transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated 1726023..1726622 Escherichia coli str. K-12 substr. MG1655 946166 NP_416167.1 CDS nemA NC_000913.3 1726659 1727756 D N-ethylmaleimide reductase; chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme 1726659..1727756 Escherichia coli str. K-12 substr. MG1655 946164 NP_416168.1 CDS gloA NC_000913.3 1727837 1728244 D lactoylglutathione lyase; glyoxalase I, Ni-dependent 1727837..1728244 Escherichia coli str. K-12 substr. MG1655 946161 NP_416169.1 CDS rnt NC_000913.3 1728347 1728994 D RNase T, degrades tRNA; ribonuclease T (RNase T) 1728347..1728994 Escherichia coli str. K-12 substr. MG1655 946159 NP_416170.1 CDS lhr NC_000913.3 1729087 1733703 D member of ATP-dependent helicase superfamily II; putative ATP-dependent helicase 1729087..1733703 Escherichia coli str. K-12 substr. MG1655 946156 NP_416171.1 CDS grxD NC_000913.3 1733754 1734101 R glutaredoxin-4 complement(1733754..1734101) Escherichia coli str. K-12 substr. MG1655 946169 NP_416172.1 CDS mepH NC_000913.3 1734435 1735250 D putative lipoprotein; murein DD-endopeptidase, space-maker hydrolase 1734435..1735250 Escherichia coli str. K-12 substr. MG1655 945210 NP_416173.1 CDS sodB NC_000913.3 1735378 1735959 D superoxide dismutase, iron; superoxide dismutase, Fe 1735378..1735959 Escherichia coli str. K-12 substr. MG1655 944953 NP_416174.1 CDS ydhP NC_000913.3 1736121 1737290 R putative transport protein; putative transporter complement(1736121..1737290) Escherichia coli str. K-12 substr. MG1655 947340 YP_001165321.1 CDS ynhF NC_000913.3 1737456 1737545 R stress response membrane complement(1737456..1737545) Escherichia coli str. K-12 substr. MG1655 5061505 NP_416175.1 CDS purR NC_000913.3 1737844 1738869 D transcriptional repressor for pur regulon, glyA, glnB, prsA, speA; transcriptional repressor, hypoxanthine-binding 1737844..1738869 Escherichia coli str. K-12 substr. MG1655 945226 NP_416176.1 CDS ydhB NC_000913.3 1738866 1739798 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(1738866..1739798) Escherichia coli str. K-12 substr. MG1655 945208 YP_025306.1 CDS ydhC NC_000913.3 1739911 1741122 D putative transport protein; putative arabinose efflux transporter 1739911..1741122 Escherichia coli str. K-12 substr. MG1655 946077 NP_416178.1 CDS cfa NC_000913.3 1741413 1742561 D cyclopropane fatty acyl phospholipid synthase; cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) 1741413..1742561 Escherichia coli str. K-12 substr. MG1655 944811 NP_416179.1 CDS ribC NC_000913.3 1742601 1743242 R riboflavin synthase, alpha chain; riboflavin synthase, alpha subunit complement(1742601..1743242) Escherichia coli str. K-12 substr. MG1655 945848 YP_025307.1 CDS mdtK NC_000913.3 1743457 1744830 D multidrug resistance protein norM (Na(+)/drug antiporter) (Multidrug-efflux transporter); multidrug efflux system transporter 1743457..1744830 Escherichia coli str. K-12 substr. MG1655 945883 NP_416181.1 CDS ydhQ NC_000913.3 1744871 1746127 R possible enzyme; autotransporter adhesin-related protein complement(1744871..1746127) Escherichia coli str. K-12 substr. MG1655 944851 NP_416182.1 CDS ydhR NC_000913.3 1746700 1747005 D putative monooxygenase 1746700..1747005 Escherichia coli str. K-12 substr. MG1655 946177 NP_416183.1 CDS ydhS NC_000913.3 1747131 1748735 D putative oxidoreductase 1747131..1748735 Escherichia coli str. K-12 substr. MG1655 945786 NP_416184.1 CDS ydhT NC_000913.3 1748747 1749559 R FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex complement(1748747..1749559) Escherichia coli str. K-12 substr. MG1655 945960 NP_416185.1 CDS ydhU NC_000913.3 1749563 1750348 R putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex complement(1749563..1750348) Escherichia coli str. K-12 substr. MG1655 945608 NP_416186.4 CDS ydhX NC_000913.3 1750345 1751013 R putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex complement(1750345..1751013) Escherichia coli str. K-12 substr. MG1655 947308 NP_416187.1 CDS ydhW NC_000913.3 1751077 1751724 R FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex complement(1751077..1751724) Escherichia coli str. K-12 substr. MG1655 947180 NP_416188.1 CDS ydhV NC_000913.3 1751728 1753830 R putative oxidoreductase subunit complement(1751728..1753830) Escherichia coli str. K-12 substr. MG1655 948756 NP_416189.1 CDS ydhY NC_000913.3 1753851 1754477 R putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex complement(1753851..1754477) Escherichia coli str. K-12 substr. MG1655 948749 NP_416190.1 CDS ydhZ NC_000913.3 1754932 1755141 R uncharacterized protein complement(1754932..1755141) Escherichia coli str. K-12 substr. MG1655 946180 NP_416191.1 CDS pykF NC_000913.3 1755698 1757110 D pyruvate kinase I (formerly F), fructose stimulated; pyruvate kinase I 1755698..1757110 Escherichia coli str. K-12 substr. MG1655 946179 NP_416192.1 CDS lpp NC_000913.3 1757421 1757657 D murein lipoprotein 1757421..1757657 Escherichia coli str. K-12 substr. MG1655 946175 NP_416193.1 CDS ldtE NC_000913.3 1757721 1758725 R murein L,D-transpeptidase complement(1757721..1758725) Escherichia coli str. K-12 substr. MG1655 946174 NP_416194.1 CDS sufE NC_000913.3 1758874 1759290 R sulfur acceptor protein complement(1758874..1759290) Escherichia coli str. K-12 substr. MG1655 946173 NP_416195.1 CDS sufS NC_000913.3 1759303 1760523 R cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent complement(1759303..1760523) Escherichia coli str. K-12 substr. MG1655 946185 NP_416196.1 CDS sufD NC_000913.3 1760520 1761791 R component of SufBCD Fe-S cluster assembly scaffold complement(1760520..1761791) Escherichia coli str. K-12 substr. MG1655 944878 NP_416197.1 CDS sufC NC_000913.3 1761766 1762512 R putative ATP-binding component of a transport system; SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein complement(1761766..1762512) Escherichia coli str. K-12 substr. MG1655 946128 NP_416198.2 CDS sufB NC_000913.3 1762522 1764009 R component of SufBCD Fe-S cluster assembly scaffold complement(1762522..1764009) Escherichia coli str. K-12 substr. MG1655 945753 NP_416199.1 CDS sufA NC_000913.3 1764018 1764386 R Fe-S cluster assembly protein complement(1764018..1764386) Escherichia coli str. K-12 substr. MG1655 949014 NP_416200.2 CDS ydiH NC_000913.3 1764934 1765122 R uncharacterized protein complement(1764934..1765122) Escherichia coli str. K-12 substr. MG1655 946194 NP_416201.1 CDS menI NC_000913.3 1765222 1765632 R 1,4-dihydroxy-2-naphthoyl-CoA hydrolase complement(1765222..1765632) Escherichia coli str. K-12 substr. MG1655 946190 NP_416202.1 CDS ydiJ NC_000913.3 1765629 1768685 R putative oxidase; putative FAD-linked oxidoreductase complement(1765629..1768685) Escherichia coli str. K-12 substr. MG1655 946189 NP_416203.1 CDS ydiK NC_000913.3 1769074 1770186 D UPF0118 family inner membrane protein 1769074..1770186 Escherichia coli str. K-12 substr. MG1655 946183 NP_416204.2 CDS ydiL NC_000913.3 1770615 1770971 D putative HTH domain DNA-binding protein 1770615..1770971 Escherichia coli str. K-12 substr. MG1655 946181 NP_416205.1 CDS ydiM NC_000913.3 1771071 1772285 D putative transport system permease protein; MFS superfamily sugar transport 1 family protein 1771071..1772285 Escherichia coli str. K-12 substr. MG1655 946196 NP_416206.6 CDS ydiN NC_000913.3 1772512 1773777 D putative amino acid/amine transport protein; MFS transporter superfamily protein 1772512..1773777 Escherichia coli str. K-12 substr. MG1655 946198 NP_416207.1 CDS ydiB NC_000913.3 1773789 1774655 D putative oxidoreductase; quinate/shikimate 5-dehydrogenase, NAD(P)-binding 1773789..1774655 Escherichia coli str. K-12 substr. MG1655 946200 NP_416208.1 CDS aroD NC_000913.3 1774686 1775444 D 3-dehydroquinate dehydratase 1774686..1775444 Escherichia coli str. K-12 substr. MG1655 946210 NP_416209.1 CDS ydiF NC_000913.3 1775587 1777182 D putative enzyme; putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit 1775587..1777182 Escherichia coli str. K-12 substr. MG1655 946211 NP_416210.4 CDS ydiO NC_000913.3 1777196 1778347 D putative oxidoreductase; putative acyl-CoA dehydrogenase 1777196..1778347 Escherichia coli str. K-12 substr. MG1655 945626 NP_416211.1 CDS ydiP NC_000913.3 1778390 1779301 R putative ARAC-type regulatory protein; putative DNA-binding transcriptional regulator complement(1778390..1779301) Escherichia coli str. K-12 substr. MG1655 945095 NP_416212.1 CDS ydiQ NC_000913.3 1779617 1780381 D putative transport protein; putative electron transfer flavoprotein subunit 1779617..1780381 Escherichia coli str. K-12 substr. MG1655 946482 NP_416213.1 CDS ydiR NC_000913.3 1780401 1781339 D putative flavoprotein; putative electron transfer flavoprotein, FAD-binding subunit 1780401..1781339 Escherichia coli str. K-12 substr. MG1655 945688 NP_416214.1 CDS ydiS NC_000913.3 1781395 1782684 D flavoprotein; probably electron transport; putative oxidoreductase 1781395..1782684 Escherichia coli str. K-12 substr. MG1655 946212 NP_416215.1 CDS ydiT NC_000913.3 1782681 1782974 D putative 3Fe-4S ferredoxin-type protein 1782681..1782974 Escherichia coli str. K-12 substr. MG1655 946214 NP_416216.4 CDS fadK NC_000913.3 1783031 1784677 D putative ligase/synthetase; short chain acyl-CoA synthetase, anaerobic 1783031..1784677 Escherichia coli str. K-12 substr. MG1655 946213 NP_416217.1 CDS ppsA NC_000913.3 1784734 1787112 R phosphoenolpyruvate synthase complement(1784734..1787112) Escherichia coli str. K-12 substr. MG1655 946209 NP_416218.1 CDS ppsR NC_000913.3 1787445 1788278 D bifunctional regulatory protein: PEP synthase kinase and PEP synthase pyrophosphorylase 1787445..1788278 Escherichia coli str. K-12 substr. MG1655 946207 NP_416219.1 CDS aroH NC_000913.3 1788435 1789481 D 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible 1788435..1789481 Escherichia coli str. K-12 substr. MG1655 946229 NP_416220.1 CDS ydiE NC_000913.3 1789613 1789804 D hemin uptake protein HemP homolog 1789613..1789804 Escherichia coli str. K-12 substr. MG1655 946205 NP_416221.1 CDS ydiU NC_000913.3 1789808 1791244 R UPF0061 family protein complement(1789808..1791244) Escherichia coli str. K-12 substr. MG1655 946219 NP_416222.1 CDS ydiV NC_000913.3 1791307 1792020 R anti-FlhD4C2 factor, inactive EAL family phosphodiesterase complement(1791307..1792020) Escherichia coli str. K-12 substr. MG1655 946217 NP_416223.1 CDS nlpC NC_000913.3 1792267 1792731 R lipoprotein; putative C40 clan peptidase lipoprotein complement(1792267..1792731) Escherichia coli str. K-12 substr. MG1655 946220 NP_416224.1 CDS btuD NC_000913.3 1792809 1793558 R ATP-binding component of vitamin B12 transport system; vitamin B12 transporter subunit : ATP-binding component of ABC superfamily complement(1792809..1793558) Escherichia coli str. K-12 substr. MG1655 945751 NP_416225.1 CDS btuE NC_000913.3 1793558 1794109 R vitamin B12 transport; glutathione peroxidase complement(1793558..1794109) Escherichia coli str. K-12 substr. MG1655 945915 NP_416226.1 CDS btuC NC_000913.3 1794172 1795152 R vitamin B12 transport permease protein; vitamin B12 transporter subunit: membrane component of ABC superfamily complement(1794172..1795152) Escherichia coli str. K-12 substr. MG1655 945877 NP_416227.1 CDS ihfA NC_000913.3 1795253 1795552 R integration host factor (IHF), alpha subunit; site specific recombination; integration host factor (IHF), DNA-binding protein, alpha subunit complement(1795253..1795552) Escherichia coli str. K-12 substr. MG1655 945472 NP_416228.1 CDS pheT NC_000913.3 1795557 1797944 R phenylalanine tRNA synthetase, beta-subunit; phenylalanine tRNA synthetase, beta subunit complement(1795557..1797944) Escherichia coli str. K-12 substr. MG1655 945382 NP_416229.1 CDS pheS NC_000913.3 1797959 1798942 R phenylalanine tRNA synthetase, alpha-subunit; phenylalanine tRNA synthetase, alpha subunit complement(1797959..1798942) Escherichia coli str. K-12 substr. MG1655 946223 NP_416230.1 CDS pheM NC_000913.3 1799226 1799270 R phenylalanyl-tRNA synthetase (pheST) operon leader peptide; phenylalanyl-tRNA synthetase operon leader peptide complement(1799226..1799270) Escherichia coli str. K-12 substr. MG1655 947212 NP_416231.1 CDS rplT NC_000913.3 1799393 1799749 R 50S ribosomal subunit protein L20, and regulator; 50S ribosomal subunit protein L20 complement(1799393..1799749) Escherichia coli str. K-12 substr. MG1655 945152 NP_416232.3 CDS rpmI NC_000913.3 1799802 1799999 R 50S ribosomal subunit protein A; 50S ribosomal subunit protein L35 complement(1799802..1799999) Escherichia coli str. K-12 substr. MG1655 946349 NP_416233.1 CDS infC NC_000913.3 1800096 1800638 R translation initiation factor IF-3 complement(1800096..1800638) Escherichia coli str. K-12 substr. MG1655 946225 NP_416234.1 CDS thrS NC_000913.3 1800642 1802570 R threonine tRNA synthetase; threonyl-tRNA synthetase complement(1800642..1802570) Escherichia coli str. K-12 substr. MG1655 946222 b4494 CDS arpB NC_000913.3 1803094 1804993 D pseudogene, ankyrin repeats; join(1803094..1803519,1803518..1804993) Escherichia coli str. K-12 substr. MG1655 948935 YP_588455.2 CDS yniD NC_000913.3 1805165 1805272 D uncharacterized protein 1805165..1805272 Escherichia coli str. K-12 substr. MG1655 1450269 NP_416236.1 CDS ydiY NC_000913.3 1805325 1806083 R acid-inducible putative outer membrane protein complement(1805325..1806083) Escherichia coli str. K-12 substr. MG1655 946218 NP_416237.3 CDS pfkB NC_000913.3 1806370 1807299 D 6-phosphofructokinase II; suppressor of pfkA; 6-phosphofructokinase II 1806370..1807299 Escherichia coli str. K-12 substr. MG1655 946230 NP_416238.1 CDS ydiZ NC_000913.3 1807400 1807690 D uncharacterized protein 1807400..1807690 Escherichia coli str. K-12 substr. MG1655 946232 NP_416239.1 CDS yniA NC_000913.3 1807796 1808656 D fructosamine kinase family protein 1807796..1808656 Escherichia coli str. K-12 substr. MG1655 946236 NP_416240.1 CDS yniB NC_000913.3 1808697 1809233 R putative inner membrane protein complement(1808697..1809233) Escherichia coli str. K-12 substr. MG1655 945140 NP_416241.1 CDS yniC NC_000913.3 1809380 1810048 D putative phosphatase; 2-deoxyglucose-6-P phosphatase 1809380..1810048 Escherichia coli str. K-12 substr. MG1655 945632 NP_416242.6 CDS ydjM NC_000913.3 1810211 1810801 D inner membrane protein regulated by LexA 1810211..1810801 Escherichia coli str. K-12 substr. MG1655 945644 NP_416243.1 CDS ydjN NC_000913.3 1810934 1812325 D putative transporter 1810934..1812325 Escherichia coli str. K-12 substr. MG1655 946238 NP_416244.2 CDS ydjO NC_000913.3 1812329 1813132 R uncharacterized protein complement(1812329..1813132) Escherichia coli str. K-12 substr. MG1655 946237 NP_416245.2 CDS cedA NC_000913.3 1813421 1813663 R cell division modulator complement(1813421..1813663) Escherichia coli str. K-12 substr. MG1655 946235 YP_025308.1 CDS katE NC_000913.3 1813867 1816128 D catalase; hydroperoxidase HPII(III); catalase HPII, heme d-containing 1813867..1816128 Escherichia coli str. K-12 substr. MG1655 946234 NP_416247.1 CDS chbG NC_000913.3 1816386 1817135 R chito-oligosaccharide deacetylase complement(1816386..1817135) Escherichia coli str. K-12 substr. MG1655 946231 NP_416248.1 CDS chbF NC_000913.3 1817148 1818500 R phospho-chitobiase; general 6-phospho-beta-glucosidase activity complement(1817148..1818500) Escherichia coli str. K-12 substr. MG1655 946266 NP_416249.1 CDS chbR NC_000913.3 1818605 1819447 R negative transcriptional regulator of cel operon; repressor of chb operon for N,N'-diacetylchitobiose utilization complement(1818605..1819447) Escherichia coli str. K-12 substr. MG1655 946247 NP_416250.1 CDS chbA NC_000913.3 1819455 1819805 R PTS family enzyme IIA, cellobiose/arbutin/salicin sugar-specific; N,N'-diacetylchitobiose-specific enzyme IIA component of PTS complement(1819455..1819805) Escherichia coli str. K-12 substr. MG1655 946244 NP_416251.1 CDS chbC NC_000913.3 1819856 1821214 R PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin; N,N'-diacetylchitobiose-specific enzyme IIC component of PTS complement(1819856..1821214) Escherichia coli str. K-12 substr. MG1655 945982 NP_416252.1 CDS chbB NC_000913.3 1821299 1821619 R PTS family enzyme IIB, cellobiose/arbutin/salicin sugar-specific; N,N'-diacetylchitobiose-specific enzyme IIB component of PTS complement(1821299..1821619) Escherichia coli str. K-12 substr. MG1655 945339 NP_416253.1 CDS osmE NC_000913.3 1821918 1822256 R activator of ntrL gene; osmotically-inducible lipoprotein complement(1821918..1822256) Escherichia coli str. K-12 substr. MG1655 945305 NP_416254.1 CDS nadE NC_000913.3 1822458 1823285 D NAD synthetase, prefers NH3 over glutamine; NAD synthetase, NH3/glutamine-dependent 1822458..1823285 Escherichia coli str. K-12 substr. MG1655 946946 NP_416255.1 CDS cho NC_000913.3 1823515 1824402 D putative excinuclease subunit; endonuclease of nucleotide excision repair 1823515..1824402 Escherichia coli str. K-12 substr. MG1655 948996 NP_416256.2 CDS ves NC_000913.3 1824362 1824937 R cold- and stress-inducible protein complement(1824362..1824937) Escherichia coli str. K-12 substr. MG1655 946245 NP_416257.1 CDS spy NC_000913.3 1825140 1825625 R periplasmic protein related to spheroblast formation; periplasmic ATP-independent protein refolding chaperone, stress-induced complement(1825140..1825625) Escherichia coli str. K-12 substr. MG1655 946253 NP_416258.1 CDS astE NC_000913.3 1825955 1826923 R succinylglutamate desuccinylase complement(1825955..1826923) Escherichia coli str. K-12 substr. MG1655 946256 NP_416259.1 CDS astB NC_000913.3 1826916 1828259 R succinylarginine dihydrolase complement(1826916..1828259) Escherichia coli str. K-12 substr. MG1655 946259 NP_416260.1 CDS astD NC_000913.3 1828256 1829734 R succinylglutamic semialdehyde dehydrogenase complement(1828256..1829734) Escherichia coli str. K-12 substr. MG1655 946260 NP_416261.1 CDS astA NC_000913.3 1829731 1830765 R arginine succinyltransferase complement(1829731..1830765) Escherichia coli str. K-12 substr. MG1655 946261 NP_416262.1 CDS astC NC_000913.3 1830762 1831982 R acetylornithine delta-aminotransferase; succinylornithine transaminase, PLP-dependent complement(1830762..1831982) Escherichia coli str. K-12 substr. MG1655 946255 NP_416263.1 CDS xthA NC_000913.3 1832428 1833234 D exonuclease III 1832428..1833234 Escherichia coli str. K-12 substr. MG1655 946254 NP_416264.4 CDS ydjX NC_000913.3 1833401 1834111 D TVP38/TMEM64 family inner membrane protein 1833401..1834111 Escherichia coli str. K-12 substr. MG1655 946250 NP_416265.4 CDS ydjY NC_000913.3 1834116 1834793 D putative ferrodoxin-like lipoprotein 1834116..1834793 Escherichia coli str. K-12 substr. MG1655 946248 NP_416266.1 CDS ydjZ NC_000913.3 1834808 1835515 D TVP38/TMEM64 family inner membrane protein 1834808..1835515 Escherichia coli str. K-12 substr. MG1655 946269 NP_416267.1 CDS ynjA NC_000913.3 1835515 1836063 D carboxymuconolactone decarboxylase family protein 1835515..1836063 Escherichia coli str. K-12 substr. MG1655 946270 NP_416268.2 CDS ynjB NC_000913.3 1836073 1837239 D putative ABC superfamily transporter periplasmic-binding protein 1836073..1837239 Escherichia coli str. K-12 substr. MG1655 946271 NP_416269.4 CDS ynjC NC_000913.3 1837212 1838747 D putative transport system permease protein; inner membrane putative ABC superfamily transporter permease 1837212..1838747 Escherichia coli str. K-12 substr. MG1655 946273 NP_416270.1 CDS ynjD NC_000913.3 1838747 1839400 D putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit 1838747..1839400 Escherichia coli str. K-12 substr. MG1655 944965 NP_416271.4 CDS ynjE NC_000913.3 1839467 1840774 D putative thiosulfate sulfur transferase; molybdopterin synthase sulfurtransferase 1839467..1840774 Escherichia coli str. K-12 substr. MG1655 946505 NP_416272.2 CDS ynjF NC_000913.3 1840783 1841403 R putative cytochrome oxidase; inner membrane protein, phosphatidylglycerophosphate synthase homolog complement(1840783..1841403) Escherichia coli str. K-12 substr. MG1655 946221 NP_416273.1 CDS nudG NC_000913.3 1841490 1841897 D 5-hydroxy-CTP pyrophosphohydrolase; CTP pyrophosphohydrolase; also hydrolyzes 2-hydroxy-dATP, 8-hydroxy-dGTP, 5-hydroxy-CTP, dCTP and 5-methyl-dCTP 1841490..1841897 Escherichia coli str. K-12 substr. MG1655 946277 NP_416274.1 CDS ynjH NC_000913.3 1841863 1842135 R DUF1496 family protein complement(1841863..1842135) Escherichia coli str. K-12 substr. MG1655 946279 NP_416275.1 CDS gdhA NC_000913.3 1842371 1843714 D NADP-specific glutamate dehydrogenase; glutamate dehydrogenase, NADP-specific 1842371..1843714 Escherichia coli str. K-12 substr. MG1655 946802 NP_416276.4 CDS ynjI NC_000913.3 1843831 1844871 R inner membrane protein complement(1843831..1844871) Escherichia coli str. K-12 substr. MG1655 946239 NP_416277.1 CDS topB NC_000913.3 1844999 1846960 R DNA topoisomerase III complement(1844999..1846960) Escherichia coli str. K-12 substr. MG1655 946141 NP_416278.1 CDS selD NC_000913.3 1846965 1848008 R selenophosphate synthase, H(2)Se added to acrylyl-tRNA; selenophosphate synthase complement(1846965..1848008) Escherichia coli str. K-12 substr. MG1655 946768 NP_416279.1 CDS ydjA NC_000913.3 1848125 1848676 R putative oxidoreductase complement(1848125..1848676) Escherichia coli str. K-12 substr. MG1655 945964 NP_416280.1 CDS sppA NC_000913.3 1848837 1850693 D protease IV, a signal peptide peptidase; protease IV (signal peptide peptidase) 1848837..1850693 Escherichia coli str. K-12 substr. MG1655 946281 NP_416281.1 CDS ansA NC_000913.3 1850860 1851876 D cytoplasmic L-asparaginase 1 1850860..1851876 Escherichia coli str. K-12 substr. MG1655 946278 NP_416282.4 CDS pncA NC_000913.3 1851887 1852528 D nicotinamidase/pyrazinamidase 1851887..1852528 Escherichia coli str. K-12 substr. MG1655 946276 NP_416283.1 CDS ydjE NC_000913.3 1852621 1853979 R putative transport protein; putative transporter complement(1852621..1853979) Escherichia coli str. K-12 substr. MG1655 946274 NP_416284.1 CDS ydjF NC_000913.3 1854096 1854854 R putative DEOR-type transcriptional regulator; putative DNA-binding transcriptional regulator complement(1854096..1854854) Escherichia coli str. K-12 substr. MG1655 946272 NP_416285.1 CDS ydjG NC_000913.3 1854991 1855971 R alpha-Keto reductase, NADH-dependent; can use methylglyoxal as substrate complement(1854991..1855971) Escherichia coli str. K-12 substr. MG1655 946283 NP_416286.4 CDS ydjH NC_000913.3 1855981 1856928 R putative kinase complement(1855981..1856928) Escherichia coli str. K-12 substr. MG1655 946285 NP_416287.1 CDS ydjI NC_000913.3 1856933 1857769 R putative aldolase complement(1856933..1857769) Escherichia coli str. K-12 substr. MG1655 946291 NP_416288.1 CDS ydjJ NC_000913.3 1857790 1858833 R putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase complement(1857790..1858833) Escherichia coli str. K-12 substr. MG1655 946292 NP_416289.1 CDS ydjK NC_000913.3 1858850 1860229 R putative transport protein; putative transporter complement(1858850..1860229) Escherichia coli str. K-12 substr. MG1655 946293 NP_416290.1 CDS ydjL NC_000913.3 1860256 1861332 R putative Zn-dependent NAD(P)-binding oxidoreductase complement(1860256..1861332) Escherichia coli str. K-12 substr. MG1655 946299 NP_416291.4 CDS yeaC NC_000913.3 1861702 1861974 R DUF1315 family protein complement(1861702..1861974) Escherichia coli str. K-12 substr. MG1655 947074 NP_416292.1 CDS msrB NC_000913.3 1862016 1862429 R methionine sulfoxide reductase B complement(1862016..1862429) Escherichia coli str. K-12 substr. MG1655 947188 NP_416293.1 CDS gapA NC_000913.3 1862771 1863766 D glyceraldehyde-3-phosphate dehydrogenase A 1862771..1863766 Escherichia coli str. K-12 substr. MG1655 947679 NP_416294.4 CDS yeaD NC_000913.3 1863850 1864734 D D-hexose-6-phosphate epimerase-like protein 1863850..1864734 Escherichia coli str. K-12 substr. MG1655 946572 NP_416295.1 CDS yeaE NC_000913.3 1864782 1865636 R putative an aldehyde reductase; aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent complement(1864782..1865636) Escherichia coli str. K-12 substr. MG1655 946302 NP_416296.1 CDS mipA NC_000913.3 1865726 1866472 R scaffolding protein for murein synthesizing machinery complement(1865726..1866472) Escherichia coli str. K-12 substr. MG1655 946301 NP_416297.1 CDS yeaG NC_000913.3 1866908 1868842 D protein kinase, endogenous substrate unidentified; autokinase 1866908..1868842 Escherichia coli str. K-12 substr. MG1655 946297 NP_416298.1 CDS yeaH NC_000913.3 1868955 1870238 D UPF0229 family protein 1868955..1870238 Escherichia coli str. K-12 substr. MG1655 946296 NP_416299.1 CDS yeaI NC_000913.3 1870385 1871860 D putative membrane-anchored diguanylate cyclase 1870385..1871860 Escherichia coli str. K-12 substr. MG1655 946366 NP_416300.2 CDS yeaJ NC_000913.3 1872041 1873531 D putative diguanylate cyclase 1872041..1873531 Escherichia coli str. K-12 substr. MG1655 946290 NP_416301.1 CDS yeaK NC_000913.3 1873574 1874077 D aminoacyl-tRNA editing domain protein 1873574..1874077 Escherichia coli str. K-12 substr. MG1655 946303 NP_416302.2 CDS yoaI NC_000913.3 1874078 1874182 R uncharacterized protein complement(1874078..1874182) Escherichia coli str. K-12 substr. MG1655 946294 NP_416303.1 CDS yeaL NC_000913.3 1874352 1874798 D UPF0756 family putative inner membrane protein 1874352..1874798 Escherichia coli str. K-12 substr. MG1655 946307 NP_416304.1 CDS yeaM NC_000913.3 1874755 1875576 R putative ARAC-type regulatory protein; putative DNA-binding transcriptional regulator complement(1874755..1875576) Escherichia coli str. K-12 substr. MG1655 946590 NP_416305.1 CDS yeaN NC_000913.3 1875673 1876854 D putative amino acid/amine transport protein; putative transporter 1875673..1876854 Escherichia coli str. K-12 substr. MG1655 946309 NP_416306.2 CDS yeaO NC_000913.3 1876909 1877256 D DUF488 family protein 1876909..1877256 Escherichia coli str. K-12 substr. MG1655 945675 NP_416307.1 CDS yoaF NC_000913.3 1877278 1877532 R DUF333 family outer membrane lipoprotein complement(1877278..1877532) Escherichia coli str. K-12 substr. MG1655 946310 NP_416308.4 CDS yeaP NC_000913.3 1877715 1878740 D diguanylate cyclase 1877715..1878740 Escherichia coli str. K-12 substr. MG1655 948969 YP_002791242.1 CDS yoaK NC_000913.3 1878773 1878871 D inner membrane-associated protein 1878773..1878871 Escherichia coli str. K-12 substr. MG1655 7751647 YP_002791243.1 CDS yoaJ NC_000913.3 1878874 1878948 D inner membrane-associated protein 1878874..1878948 Escherichia coli str. K-12 substr. MG1655 7751648 NP_416309.1 CDS yeaQ NC_000913.3 1879007 1879255 R UPF0410 family protein complement(1879007..1879255) Escherichia coli str. K-12 substr. MG1655 946311 NP_416310.1 CDS yoaG NC_000913.3 1879403 1879585 R uncharacterized protein complement(1879403..1879585) Escherichia coli str. K-12 substr. MG1655 946314 NP_416311.1 CDS yeaR NC_000913.3 1879589 1879948 R DUF1971 family protein, nitrate-inducible complement(1879589..1879948) Escherichia coli str. K-12 substr. MG1655 946317 NP_416312.1 CDS leuE NC_000913.3 1880121 1880759 R leucine efflux protein complement(1880121..1880759) Escherichia coli str. K-12 substr. MG1655 946157 NP_416313.4 CDS dmlR NC_000913.3 1880886 1881809 R putative transcriptional regulator LYSR-type; transcriptional activator of dmlA complement(1880886..1881809) Escherichia coli str. K-12 substr. MG1655 946316 NP_416314.1 CDS dmlA NC_000913.3 1881912 1882997 D putative tartrate dehydrogenase; D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 1881912..1882997 Escherichia coli str. K-12 substr. MG1655 946319 NP_416315.1 CDS yeaV NC_000913.3 1883188 1884633 D putative transport protein; putative transporter 1883188..1884633 Escherichia coli str. K-12 substr. MG1655 947326 NP_416316.1 CDS yeaW NC_000913.3 1884665 1885789 D putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster 1884665..1885789 Escherichia coli str. K-12 substr. MG1655 946325 NP_416317.1 CDS yeaX NC_000913.3 1885845 1886810 D putative diogenase beta subunit; putative YeaWX dioxygenase beta subunit, reductase component 1885845..1886810 Escherichia coli str. K-12 substr. MG1655 946329 NP_416318.1 CDS rnd NC_000913.3 1886864 1887991 R RNase D, processes tRNA precursor; ribonuclease D complement(1886864..1887991) Escherichia coli str. K-12 substr. MG1655 946328 NP_416319.1 CDS fadD NC_000913.3 1888061 1889746 R acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) complement(1888061..1889746) Escherichia coli str. K-12 substr. MG1655 946327 NP_416320.1 CDS yeaY NC_000913.3 1889951 1890532 R putative outer membrane protein; Slp family lipoprotein, RpoE-regulated complement(1889951..1890532) Escherichia coli str. K-12 substr. MG1655 946312 NP_416321.1 CDS tsaB NC_000913.3 1890572 1891267 R tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD complement(1890572..1891267) Escherichia coli str. K-12 substr. MG1655 946304 NP_416322.1 CDS yoaA NC_000913.3 1891325 1893235 R putative enzyme; putative ATP-dependent helicase, DinG family complement(1891325..1893235) Escherichia coli str. K-12 substr. MG1655 946305 NP_416323.4 CDS yoaB NC_000913.3 1893367 1893711 D putative reactive intermediate deaminase 1893367..1893711 Escherichia coli str. K-12 substr. MG1655 946357 NP_416324.2 CDS yoaC NC_000913.3 1894133 1894432 D DUF1889 family protein 1894133..1894432 Escherichia coli str. K-12 substr. MG1655 946308 NP_416325.1 CDS yoaH NC_000913.3 1894552 1894731 R UPF0181 family protein complement(1894552..1894731) Escherichia coli str. K-12 substr. MG1655 946346 NP_416326.1 CDS pabB NC_000913.3 1894805 1896166 D p-aminobenzoate synthetase, component I; aminodeoxychorismate synthase, subunit I 1894805..1896166 Escherichia coli str. K-12 substr. MG1655 946337 NP_416327.1 CDS nudL NC_000913.3 1896170 1896748 D putative CoA pyrophosphohydrolase, weak 3-phosphohydroxypyruvate phosphatase 1896170..1896748 Escherichia coli str. K-12 substr. MG1655 946330 NP_416328.1 CDS sdaA NC_000913.3 1896932 1898296 D L-serine deaminase; L-serine dehydratase 1 1896932..1898296 Escherichia coli str. K-12 substr. MG1655 946331 NP_416329.4 CDS yoaD NC_000913.3 1898427 1900025 D putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production 1898427..1900025 Escherichia coli str. K-12 substr. MG1655 946336 NP_416330.1 CDS yoaE NC_000913.3 1900029 1901585 R putative transport protein; putative membrane protein/conserved protein complement(1900029..1901585) Escherichia coli str. K-12 substr. MG1655 946335 NP_416331.1 CDS manX NC_000913.3 1902048 1903019 D PTS enzyme IIAB, mannose-specific; fused mannose-specific PTS enzymes: IIA component/IIB component 1902048..1903019 Escherichia coli str. K-12 substr. MG1655 946334 NP_416332.1 CDS manY NC_000913.3 1903082 1903882 D PTS enzyme IIC, mannose-specific; mannose-specific enzyme IIC component of PTS 1903082..1903882 Escherichia coli str. K-12 substr. MG1655 946332 NP_416333.4 CDS manZ NC_000913.3 1903895 1904746 D PTS enzyme IID, mannose-specific; mannose-specific enzyme IID component of PTS 1903895..1904746 Escherichia coli str. K-12 substr. MG1655 946342 NP_416334.1 CDS yobD NC_000913.3 1904801 1905259 D UPF0266 family inner membrane protein 1904801..1905259 Escherichia coli str. K-12 substr. MG1655 946343 NP_416335.4 CDS mntP NC_000913.3 1905688 1906254 D putative Mn(2+) efflux pump, mntR-regulated 1905688..1906254 Escherichia coli str. K-12 substr. MG1655 946341 NP_416336.1 CDS rlmA NC_000913.3 1906251 1907060 R 23S rRNA m(1)G745 methyltransferase, SAM-dependent complement(1906251..1907060) Escherichia coli str. K-12 substr. MG1655 946340 NP_416337.1 CDS cspC NC_000913.3 1907226 1907435 R cold shock protein; stress protein, member of the CspA-family complement(1907226..1907435) Escherichia coli str. K-12 substr. MG1655 946339 NP_416338.1 CDS yobF NC_000913.3 1907448 1907591 R DUF2527 family heat-induced protein complement(1907448..1907591) Escherichia coli str. K-12 substr. MG1655 946338 NP_416339.1 CDS yebO NC_000913.3 1908261 1908548 R putative inner membrane protein complement(1908261..1908548) Escherichia coli str. K-12 substr. MG1655 946350 NP_416340.1 CDS mgrB NC_000913.3 1908623 1908766 R regulatory peptide for PhoPQ, feedback inhibition complement(1908623..1908766) Escherichia coli str. K-12 substr. MG1655 946351 YP_588456.1 CDS yobH NC_000913.3 1908925 1909164 D uncharacterized protein 1908925..1909164 Escherichia coli str. K-12 substr. MG1655 1450271 NP_416341.1 CDS kdgR NC_000913.3 1909308 1910099 R KDG regulon transcriptional repressor complement(1909308..1910099) Escherichia coli str. K-12 substr. MG1655 946129 NP_416342.4 CDS yebQ NC_000913.3 1910276 1911649 D putative transport protein; putative transporter 1910276..1911649 Escherichia coli str. K-12 substr. MG1655 946048 NP_416343.1 CDS htpX NC_000913.3 1911695 1912576 R heat shock protein, integral membrane protein; putative endopeptidase complement(1911695..1912576) Escherichia coli str. K-12 substr. MG1655 946076 NP_416344.1 CDS prc NC_000913.3 1912768 1914816 R carboxy-terminal protease for penicillin-binding protein 3 complement(1912768..1914816) Escherichia coli str. K-12 substr. MG1655 946096 YP_026161.1 CDS proQ NC_000913.3 1914836 1915534 R regulator of ProP; putative structural element which influences activation of ProP; RNA chaperone, putative ProP translation regulator complement(1914836..1915534) Escherichia coli str. K-12 substr. MG1655 948950 NP_416346.4 CDS msrC NC_000913.3 1915631 1916128 R free methionine-(R)-sulfoxide reductase complement(1915631..1916128) Escherichia coli str. K-12 substr. MG1655 946086 NP_416347.1 CDS yebS NC_000913.3 1916258 1917541 D inner membrane protein 1916258..1917541 Escherichia coli str. K-12 substr. MG1655 946353 NP_416348.2 CDS yebT NC_000913.3 1917510 1920143 D MCE domain protein 1917510..1920143 Escherichia coli str. K-12 substr. MG1655 946352 NP_416349.2 CDS rsmF NC_000913.3 1920223 1921662 D 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 1920223..1921662 Escherichia coli str. K-12 substr. MG1655 946348 NP_416350.4 CDS yebV NC_000913.3 1921780 1922016 D uncharacterized protein 1921780..1922016 Escherichia coli str. K-12 substr. MG1655 946347 NP_416351.2 CDS yebW NC_000913.3 1922121 1922312 D uncharacterized protein 1922121..1922312 Escherichia coli str. K-12 substr. MG1655 946354 NP_416352.4 CDS pphA NC_000913.3 1922313 1922969 R serine/threonine-specific protein phosphatase 1 complement(1922313..1922969) Escherichia coli str. K-12 substr. MG1655 946356 NP_416353.1 CDS yebY NC_000913.3 1923365 1923706 R DUF2511 family protein complement(1923365..1923706) Escherichia coli str. K-12 substr. MG1655 947014 NP_416354.1 CDS yebZ NC_000913.3 1923719 1924591 R putative resistance protein; inner membrane protein complement(1923719..1924591) Escherichia coli str. K-12 substr. MG1655 947078 NP_416355.1 CDS yobA NC_000913.3 1924595 1924969 R CopC family protein complement(1924595..1924969) Escherichia coli str. K-12 substr. MG1655 948315 NP_416356.1 CDS holE NC_000913.3 1925108 1925338 D DNA polymerase III, theta subunit 1925108..1925338 Escherichia coli str. K-12 substr. MG1655 947471 NP_416357.1 CDS yobB NC_000913.3 1925440 1926096 D C-N hydrolase family protein 1925440..1926096 Escherichia coli str. K-12 substr. MG1655 948329 NP_416358.1 CDS exoX NC_000913.3 1926120 1926782 D exodeoxyribonuclease 10; DNA exonuclease X 1926120..1926782 Escherichia coli str. K-12 substr. MG1655 946361 NP_416359.1 CDS ptrB NC_000913.3 1926779 1928839 R protease II complement(1926779..1928839) Escherichia coli str. K-12 substr. MG1655 946358 NP_416360.1 CDS yebE NC_000913.3 1929048 1929707 R DUF533 family inner membrane protein complement(1929048..1929707) Escherichia coli str. K-12 substr. MG1655 946355 NP_416361.2 CDS yebF NC_000913.3 1930034 1930390 R extracellular Colicin M immunity family protein complement(1930034..1930390) Escherichia coli str. K-12 substr. MG1655 946363 NP_416362.1 CDS yebG NC_000913.3 1930457 1930747 R DNA damage-inducible protein regulated by LexA complement(1930457..1930747) Escherichia coli str. K-12 substr. MG1655 946364 NP_416363.1 CDS purT NC_000913.3 1930881 1932059 D phosphoribosylglycinamide formyltransferase 2 1930881..1932059 Escherichia coli str. K-12 substr. MG1655 946368 NP_416364.1 CDS eda NC_000913.3 1932115 1932756 R 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase; multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase complement(1932115..1932756) Escherichia coli str. K-12 substr. MG1655 946367 NP_416365.1 CDS edd NC_000913.3 1932793 1934604 R 6-phosphogluconate dehydratase complement(1932793..1934604) Escherichia coli str. K-12 substr. MG1655 946362 NP_416366.1 CDS zwf NC_000913.3 1934839 1936314 R glucose-6-phosphate 1-dehydrogenase complement(1934839..1936314) Escherichia coli str. K-12 substr. MG1655 946370 NP_416367.1 CDS yebK NC_000913.3 1936652 1937521 D putative DNA-binding transcriptional regulator 1936652..1937521 Escherichia coli str. K-12 substr. MG1655 946373 NP_416368.1 CDS pykA NC_000913.3 1937649 1939091 D pyruvate kinase II, glucose stimulated; pyruvate kinase II 1937649..1939091 Escherichia coli str. K-12 substr. MG1655 946527 NP_416369.1 CDS lpxM NC_000913.3 1939222 1940193 R suppressor of htrB, heat shock protein; myristoyl-acyl carrier protein (ACP)-dependent acyltransferase complement(1939222..1940193) Escherichia coli str. K-12 substr. MG1655 945143 NP_416370.2 CDS mepM NC_000913.3 1940313 1941635 R murein DD-endopeptidase, space-maker hydrolase, septation protein complement(1940313..1941635) Escherichia coli str. K-12 substr. MG1655 946376 NP_416371.4 CDS znuA NC_000913.3 1941651 1942583 R zinc transporter subunit: periplasmic-binding component of ABC superfamily complement(1941651..1942583) Escherichia coli str. K-12 substr. MG1655 946375 NP_416372.1 CDS znuC NC_000913.3 1942662 1943417 D zinc transporter subunit: ATP-binding component of ABC superfamily 1942662..1943417 Escherichia coli str. K-12 substr. MG1655 946374 NP_416373.1 CDS znuB NC_000913.3 1943414 1944199 D zinc transporter subunit: membrane component of ABC superfamily 1943414..1944199 Escherichia coli str. K-12 substr. MG1655 946372 NP_416374.1 CDS ruvB NC_000913.3 1944346 1945356 R Holliday junction helicase subunit A; branch migration; repair; ATP-dependent DNA helicase, component of RuvABC resolvasome complement(1944346..1945356) Escherichia coli str. K-12 substr. MG1655 946371 NP_416375.1 CDS ruvA NC_000913.3 1945365 1945976 R Holliday junction helicase subunit B; branch migration; repair; component of RuvABC resolvasome, regulatory subunit complement(1945365..1945976) Escherichia coli str. K-12 substr. MG1655 946369 YP_002791244.1 CDS yobI NC_000913.3 1946115 1946180 R uncharacterized protein complement(1946115..1946180) Escherichia coli str. K-12 substr. MG1655 7751641 NP_416376.2 CDS yebB NC_000913.3 1946251 1946853 D DUF830 family protein 1946251..1946853 Escherichia coli str. K-12 substr. MG1655 946377 NP_416377.1 CDS ruvC NC_000913.3 1946855 1947376 R Holliday junction nuclease; resolution of structures; repair; component of RuvABC resolvasome, endonuclease complement(1946855..1947376) Escherichia coli str. K-12 substr. MG1655 946378 NP_416378.1 CDS yebC NC_000913.3 1947411 1948151 R UPF0082 family protein complement(1947411..1948151) Escherichia coli str. K-12 substr. MG1655 946379 NP_416379.1 CDS nudB NC_000913.3 1948180 1948632 R dihydroneopterin triphosphate pyrophosphatase complement(1948180..1948632) Escherichia coli str. K-12 substr. MG1655 946383 NP_416380.1 CDS aspS NC_000913.3 1948750 1950522 R aspartate tRNA synthetase; aspartyl-tRNA synthetase complement(1948750..1950522) Escherichia coli str. K-12 substr. MG1655 946385 NP_416381.2 CDS yecD NC_000913.3 1950832 1951398 D isochorismatase family protein 1950832..1951398 Escherichia coli str. K-12 substr. MG1655 946384 NP_416382.1 CDS yecE NC_000913.3 1951395 1952213 D UPF0759 family protein 1951395..1952213 Escherichia coli str. K-12 substr. MG1655 946382 NP_416383.4 CDS yecN NC_000913.3 1952266 1952661 D MAPEG family inner membrane protein 1952266..1952661 Escherichia coli str. K-12 substr. MG1655 946381 NP_416384.1 CDS cmoA NC_000913.3 1952702 1953445 D carboxy-SAM synthase 1952702..1953445 Escherichia coli str. K-12 substr. MG1655 946380 NP_416385.1 CDS cmoB NC_000913.3 1953442 1954413 D putative enzyme; tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent 1953442..1954413 Escherichia coli str. K-12 substr. MG1655 946387 NP_416386.4 CDS torZ NC_000913.3 1954578 1957007 R trimethylamine N-oxide reductase system III, catalytic subunit complement(1954578..1957007) Escherichia coli str. K-12 substr. MG1655 946389 NP_416387.1 CDS torY NC_000913.3 1957032 1958132 R TMAO reductase III (TorYZ), cytochrome c-type subunit complement(1957032..1958132) Escherichia coli str. K-12 substr. MG1655 946490 YP_025309.2 CDS cutC NC_000913.3 1958520 1959266 R copper homeostasis protein complement(1958520..1959266) Escherichia coli str. K-12 substr. MG1655 2847756 NP_416389.4 CDS yecM NC_000913.3 1959280 1959846 R putative metal-binding enzyme complement(1959280..1959846) Escherichia coli str. K-12 substr. MG1655 946415 NP_416390.1 CDS argS NC_000913.3 1960062 1961795 D arginine tRNA synthetase; arginyl-tRNA synthetase 1960062..1961795 Escherichia coli str. K-12 substr. MG1655 946452 NP_416391.4 CDS yecT NC_000913.3 1961972 1962460 D uncharacterized protein 1961972..1962460 Escherichia coli str. K-12 substr. MG1655 946511 NP_416392.1 CDS flhE NC_000913.3 1962580 1962972 R flagellar protein; proton seal during flagellar secretion complement(1962580..1962972) Escherichia coli str. K-12 substr. MG1655 946094 NP_416393.1 CDS flhA NC_000913.3 1962972 1965050 R flagellar biosynthesis; possible export of flagellar proteins; putative flagellar export pore protein complement(1962972..1965050) Escherichia coli str. K-12 substr. MG1655 946390 NP_416394.1 CDS flhB NC_000913.3 1965043 1966191 R putative part of export apparatus for flagellar proteins; flagellin export apparatus, substrate specificity protein complement(1965043..1966191) Escherichia coli str. K-12 substr. MG1655 946391 NP_416395.1 CDS cheZ NC_000913.3 1966393 1967037 R chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator; chemotaxis regulator, protein phosphatase for CheY complement(1966393..1967037) Escherichia coli str. K-12 substr. MG1655 946392 NP_416396.1 CDS cheY NC_000913.3 1967048 1967437 R chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components; chemotaxis regulator transmitting signal to flagellar motor component complement(1967048..1967437) Escherichia coli str. K-12 substr. MG1655 946393 NP_416397.1 CDS cheB NC_000913.3 1967452 1968501 R response regulator for chemotaxis (cheA sensor); protein methylesterase; fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA complement(1967452..1968501) Escherichia coli str. K-12 substr. MG1655 946394 NP_416398.1 CDS cheR NC_000913.3 1968504 1969364 R response regulator for chemotaxis; protein glutamate methyltransferase; chemotaxis regulator, protein-glutamate methyltransferase complement(1968504..1969364) Escherichia coli str. K-12 substr. MG1655 946396 NP_416399.1 CDS tap NC_000913.3 1969383 1970984 R methyl-accepting chemotaxis protein IV, peptide sensor receptor; methyl-accepting protein IV complement(1969383..1970984) Escherichia coli str. K-12 substr. MG1655 946397 NP_416400.1 CDS tar NC_000913.3 1971030 1972691 R methyl-accepting chemotaxis protein II, aspartate sensor receptor; methyl-accepting chemotaxis protein II complement(1971030..1972691) Escherichia coli str. K-12 substr. MG1655 946399 NP_416401.1 CDS cheW NC_000913.3 1972836 1973339 R positive regulator of CheA protein activity; purine-binding chemotaxis protein complement(1972836..1973339) Escherichia coli str. K-12 substr. MG1655 946400 NP_416402.1 CDS cheA NC_000913.3 1973360 1975324 R sensory transducer kinase between chemo- signal receptors and CheB and CheY; fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein complement(1973360..1975324) Escherichia coli str. K-12 substr. MG1655 946401 NP_416403.1 CDS motB NC_000913.3 1975329 1976255 R enables flagellar motor rotation, linking torque machinery to cell wall; protein that enables flagellar motor rotation complement(1975329..1976255) Escherichia coli str. K-12 substr. MG1655 946402 NP_416404.1 CDS motA NC_000913.3 1976252 1977139 R proton conductor component of motor; no effect on switching; proton conductor component of flagella motor complement(1976252..1977139) Escherichia coli str. K-12 substr. MG1655 947564 NP_416405.1 CDS flhC NC_000913.3 1977266 1977844 R regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor?; flagellar class II regulon transcriptional activator, with FlhD complement(1977266..1977844) Escherichia coli str. K-12 substr. MG1655 947280 NP_416406.4 CDS flhD NC_000913.3 1977847 1978197 R regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor?; flagellar class II regulon transcriptional activator, with FlhC complement(1977847..1978197) Escherichia coli str. K-12 substr. MG1655 945442 NP_416407.1 CDS insB1 NC_000913.3 1978518 1979021 R IS1 transposase B complement(1978518..1979021) Escherichia coli str. K-12 substr. MG1655 945867 NP_416408.1 CDS insA NC_000913.3 1978940 1979215 R IS1 repressor TnpA complement(1978940..1979215) Escherichia coli str. K-12 substr. MG1655 945800 NP_416409.1 CDS uspC NC_000913.3 1979753 1980181 D putative regulator; universal stress protein 1979753..1980181 Escherichia coli str. K-12 substr. MG1655 946404 NP_416410.1 CDS otsA NC_000913.3 1980188 1981612 R trehalose-6-phosphate synthase complement(1980188..1981612) Escherichia coli str. K-12 substr. MG1655 946405 NP_416411.1 CDS otsB NC_000913.3 1981587 1982387 R trehalose-6-phosphate phophatase, biosynthetic; trehalose-6-phosphate phosphatase, biosynthetic complement(1981587..1982387) Escherichia coli str. K-12 substr. MG1655 946406 YP_026162.2 CDS araH NC_000913.3 1982554 1983540 R high-affinity L-arabinose transport protein (ABC superfamily, membrane); fused L-arabinose transporter subunits of ABC superfamily: membrane components complement(1982554..1983540) Escherichia coli str. K-12 substr. MG1655 948923 NP_416413.1 CDS araG NC_000913.3 1983555 1985069 R ATP-binding component of high-affinity L-arabinose transport system; fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components complement(1983555..1985069) Escherichia coli str. K-12 substr. MG1655 946408 NP_416414.1 CDS araF NC_000913.3 1985139 1986128 R L-arabinose-binding periplasmic protein; periplasmic-binding component of ABC superfamily; L-arabinose transporter subunit complement(1985139..1986128) Escherichia coli str. K-12 substr. MG1655 946409 NP_416415.1 CDS ftnB NC_000913.3 1986925 1987428 D ferritin-like protein; ferritin B, putative ferrous iron reservoir 1986925..1987428 Escherichia coli str. K-12 substr. MG1655 946407 NP_416416.2 CDS yecJ NC_000913.3 1987507 1987758 R uncharacterized protein complement(1987507..1987758) Escherichia coli str. K-12 substr. MG1655 946388 YP_002791245.1 CDS azuC NC_000913.3 1987873 1987959 R acid-inducible small membrane-associated protein complement(1987873..1987959) Escherichia coli str. K-12 substr. MG1655 7751642 NP_416417.1 CDS yecR NC_000913.3 1988222 1988545 D lipoprotein, function unknown 1988222..1988545 Escherichia coli str. K-12 substr. MG1655 946386 NP_416418.1 CDS ftnA NC_000913.3 1988716 1989213 D cytoplasmic ferritin (an iron storage protein); ferritin iron storage protein (cytoplasmic) 1988716..1989213 Escherichia coli str. K-12 substr. MG1655 946410 NP_416419.1 CDS yecH NC_000913.3 1989251 1989490 R DUF2492 family protein complement(1989251..1989490) Escherichia coli str. K-12 substr. MG1655 946411 NP_416420.1 CDS tyrP NC_000913.3 1989681 1990892 D tyrosine-specific transport system; tyrosine transporter 1989681..1990892 Escherichia coli str. K-12 substr. MG1655 946412 NP_416421.1 CDS yecA NC_000913.3 1990954 1991619 R UPF0149 family protein complement(1990954..1991619) Escherichia coli str. K-12 substr. MG1655 945061 NP_416422.1 CDS pgsA NC_000913.3 1992269 1992817 R phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase; phosphatidylglycerophosphate synthetase complement(1992269..1992817) Escherichia coli str. K-12 substr. MG1655 945791 NP_416423.4 CDS uvrC NC_000913.3 1992874 1994706 R excinuclease ABC, subunit C; repair of UV damage to DNA; excinuclease UvrABC, endonuclease subunit complement(1992874..1994706) Escherichia coli str. K-12 substr. MG1655 947203 NP_416424.1 CDS uvrY NC_000913.3 1994703 1995359 R putative 2-component transcriptional regulator; response regulator in two-component regulatory system with BarA complement(1994703..1995359) Escherichia coli str. K-12 substr. MG1655 946424 NP_416425.1 CDS yecF NC_000913.3 1995818 1996042 D DUF2594 family protein 1995818..1996042 Escherichia coli str. K-12 substr. MG1655 946420 NP_416426.1 CDS sdiA NC_000913.3 1996110 1996832 R transcriptional regulator of ftsQAZ gene cluster; quorum-sensing transcriptional activator complement(1996110..1996832) Escherichia coli str. K-12 substr. MG1655 946421 NP_416427.1 CDS yecC NC_000913.3 1997062 1997814 R putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit complement(1997062..1997814) Escherichia coli str. K-12 substr. MG1655 946422 NP_416428.1 CDS yecS NC_000913.3 1997811 1998479 R putative transport system permease protein (former yecC); ABC family putative inner membrane permease complement(1997811..1998479) Escherichia coli str. K-12 substr. MG1655 949105 NP_416429.4 CDS dcyD NC_000913.3 1998494 1999480 R putative 1-aminocyclopropane-1-carboxylate deaminase; D-cysteine desulfhydrase, PLP-dependent complement(1998494..1999480) Escherichia coli str. K-12 substr. MG1655 946831 NP_416430.1 CDS fliY NC_000913.3 1999585 2000385 R putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily; cystine transporter subunit complement(1999585..2000385) Escherichia coli str. K-12 substr. MG1655 948833 NP_416431.2 CDS fliZ NC_000913.3 2000473 2001024 R RpoS antagonist; putative regulator of FliA activity complement(2000473..2001024) Escherichia coli str. K-12 substr. MG1655 946833 NP_416432.3 CDS fliA NC_000913.3 2001070 2001789 R flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons; RNA polymerase, sigma 28 (sigma F) factor complement(2001070..2001789) Escherichia coli str. K-12 substr. MG1655 948824 NP_416433.1 CDS fliC NC_000913.3 2002110 2003606 R flagellar biosynthesis; flagellin, filament structural protein; flagellar filament structural protein (flagellin) complement(2002110..2003606) Escherichia coli str. K-12 substr. MG1655 949101 NP_416434.1 CDS fliD NC_000913.3 2003872 2005278 D flagellar biosynthesis; filament capping protein; enables filament assembly; flagellar filament capping protein 2003872..2005278 Escherichia coli str. K-12 substr. MG1655 946428 NP_416435.1 CDS fliS NC_000913.3 2005303 2005713 D flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity); flagellar protein potentiates polymerization 2005303..2005713 Escherichia coli str. K-12 substr. MG1655 946429 NP_416436.1 CDS fliT NC_000913.3 2005713 2006078 D flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity); putative flagellar synthesis and assembly chaperone 2005713..2006078 Escherichia coli str. K-12 substr. MG1655 946433 NP_416437.1 CDS amyA NC_000913.3 2006156 2007643 D cytoplasmic alpha-amylase 2006156..2007643 Escherichia coli str. K-12 substr. MG1655 946434 NP_416438.1 CDS yedD NC_000913.3 2007677 2008090 R lipoprotein complement(2007677..2008090) Escherichia coli str. K-12 substr. MG1655 949082 NP_416439.1 CDS yedE NC_000913.3 2008277 2009482 D putative transport system permease protein; UPF0394 family sulfur transport domain-containing inner membrane protein 2008277..2009482 Escherichia coli str. K-12 substr. MG1655 945192 NP_416440.1 CDS yedF NC_000913.3 2009479 2009712 D putative TusA family sulfurtransferase 2009479..2009712 Escherichia coli str. K-12 substr. MG1655 946909 YP_025310.1 CDS yedK NC_000913.3 2009821 2010489 D DUF159 family protein 2009821..2010489 Escherichia coli str. K-12 substr. MG1655 946435 NP_416442.1 CDS yedL NC_000913.3 2010600 2011079 D putative acyl transferase 2010600..2011079 Escherichia coli str. K-12 substr. MG1655 946437 b4495 CDS yedN NC_000913.3 2011223 2012351 R pseudogene, IpaH/YopM family; complement(join(2011223..2011357,2011363..2012040,2012040..2012351)) Escherichia coli str. K-12 substr. MG1655 2847704 b1936 CDS intG NC_000913.3 2012502 2012663 D pseudogene, phage integrase family; 2012502..2012663 Escherichia coli str. K-12 substr. MG1655 946445 NP_416447.1 CDS fliE NC_000913.3 2012700 2013014 R flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction; flagellar basal-body component complement(2012700..2013014) Escherichia coli str. K-12 substr. MG1655 946446 NP_416448.1 CDS fliF NC_000913.3 2013229 2014887 D flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein; flagellar basal-body MS-ring and collar protein 2013229..2014887 Escherichia coli str. K-12 substr. MG1655 946448 NP_416449.1 CDS fliG NC_000913.3 2014880 2015875 D flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2014880..2015875 Escherichia coli str. K-12 substr. MG1655 946451 NP_416450.2 CDS fliH NC_000913.3 2015868 2016554 D flagellar biosynthesis; export of flagellar proteins?; negative regulator of FliI ATPase activity 2015868..2016554 Escherichia coli str. K-12 substr. MG1655 946456 NP_416451.1 CDS fliI NC_000913.3 2016554 2017927 D flagellum-specific ATP synthase 2016554..2017927 Escherichia coli str. K-12 substr. MG1655 946457 NP_416452.1 CDS fliJ NC_000913.3 2017946 2018389 D flagellar fliJ protein; flagellar protein 2017946..2018389 Escherichia coli str. K-12 substr. MG1655 946454 NP_416453.1 CDS fliK NC_000913.3 2018386 2019513 D flagellar hook-length control protein 2018386..2019513 Escherichia coli str. K-12 substr. MG1655 946449 NP_416454.1 CDS fliL NC_000913.3 2019618 2020082 D flagellar biosynthesis; flagellar biosynthesis protein 2019618..2020082 Escherichia coli str. K-12 substr. MG1655 946443 NP_416455.1 CDS fliM NC_000913.3 2020087 2021091 D flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2020087..2021091 Escherichia coli str. K-12 substr. MG1655 946442 NP_416456.1 CDS fliN NC_000913.3 2021088 2021501 D flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2021088..2021501 Escherichia coli str. K-12 substr. MG1655 946423 NP_416457.4 CDS fliO NC_000913.3 2021504 2021869 D flagellar biosynthesis; flagellar biosynthesis protein 2021504..2021869 Escherichia coli str. K-12 substr. MG1655 946458 NP_416458.1 CDS fliP NC_000913.3 2021869 2022606 D flagellar biosynthesis; flagellar biosynthesis protein 2021869..2022606 Escherichia coli str. K-12 substr. MG1655 946462 NP_416459.1 CDS fliQ NC_000913.3 2022616 2022885 D flagellar biosynthesis; flagellar biosynthesis protein 2022616..2022885 Escherichia coli str. K-12 substr. MG1655 946463 NP_416460.1 CDS fliR NC_000913.3 2022893 2023678 D flagellar biosynthesis; flagellar export pore protein 2022893..2023678 Escherichia coli str. K-12 substr. MG1655 946464 NP_416461.1 CDS rcsA NC_000913.3 2023968 2024591 D positive regulator for ctr capsule biosynthesis, positive transcription factor; transcriptional regulator of colanic acid capsular biosynthesis 2023968..2024591 Escherichia coli str. K-12 substr. MG1655 946467 NP_416462.1 CDS dsrB NC_000913.3 2024635 2024823 R uncharacterized protein complement(2024635..2024823) Escherichia coli str. K-12 substr. MG1655 946468 NP_416463.4 CDS yodD NC_000913.3 2024986 2025213 D uncharacterized protein 2024986..2025213 Escherichia coli str. K-12 substr. MG1655 946469 NP_416464.1 CDS yedP NC_000913.3 2025511 2026326 D putative mannosyl-3-phosphoglycerate phosphatase 2025511..2026326 Escherichia coli str. K-12 substr. MG1655 946472 NP_416465.2 CDS yedQ NC_000913.3 2026323 2028017 R putative membrane-anchored diguanylate cyclase complement(2026323..2028017) Escherichia coli str. K-12 substr. MG1655 946471 NP_416466.1 CDS yodC NC_000913.3 2028188 2028370 R uncharacterized protein complement(2028188..2028370) Escherichia coli str. K-12 substr. MG1655 946466 NP_416467.1 CDS yedI NC_000913.3 2028449 2029366 R DUF808 family inner membrane protein complement(2028449..2029366) Escherichia coli str. K-12 substr. MG1655 946465 NP_416468.1 CDS yedA NC_000913.3 2029539 2030459 D putative transmembrane subunit; amino acid exporter for phenylalanine, threonine 2029539..2030459 Escherichia coli str. K-12 substr. MG1655 946461 NP_416469.1 CDS vsr NC_000913.3 2030448 2030918 R DNA mismatch endonuclease, patch repair protein; DNA mismatch endonuclease of very short patch repair complement(2030448..2030918) Escherichia coli str. K-12 substr. MG1655 946476 NP_416470.1 CDS dcm NC_000913.3 2030899 2032317 R DNA cytosine methyltransferase complement(2030899..2032317) Escherichia coli str. K-12 substr. MG1655 946479 NP_416471.1 CDS yedJ NC_000913.3 2032384 2033079 R putative HD superfamily phosphohydrolase complement(2032384..2033079) Escherichia coli str. K-12 substr. MG1655 946478 NP_416472.2 CDS yedR NC_000913.3 2033119 2033484 R inner membrane protein complement(2033119..2033484) Escherichia coli str. K-12 substr. MG1655 946477 b4496 CDS yedS NC_000913.3 2034051 2035243 D pseudogene, outer membrane protein homology; putative outer membrane protein; join(2034051..2034713,2034713..2035243) Escherichia coli str. K-12 substr. MG1655 2847763 NP_416476.1 CDS hchA NC_000913.3 2035835 2036686 D glyoxalase III and Hsp31 molecular chaperone 2035835..2036686 Escherichia coli str. K-12 substr. MG1655 946481 NP_416477.1 CDS yedV NC_000913.3 2036794 2038152 R putative 2-component sensor protein; putative sensory kinase in two-component regulatory system with YedW complement(2036794..2038152) Escherichia coli str. K-12 substr. MG1655 946487 NP_416478.2 CDS yedW NC_000913.3 2038152 2038823 R putative 2-component transcriptional regulator; response regulator family protein complement(2038152..2038823) Escherichia coli str. K-12 substr. MG1655 946486 NP_416479.1 CDS hiuH NC_000913.3 2038956 2039369 D hydroxyisourate hydrolase 2038956..2039369 Escherichia coli str. K-12 substr. MG1655 946485 NP_416480.1 CDS yedY NC_000913.3 2039478 2040482 D putative reductase; membrane-anchored, periplasmic TMAO, DMSO reductase 2039478..2040482 Escherichia coli str. K-12 substr. MG1655 946484 NP_416481.1 CDS yedZ NC_000913.3 2040483 2041118 D inner membrane heme subunit for periplasmic YedYZ reductase 2040483..2041118 Escherichia coli str. K-12 substr. MG1655 946483 NP_416482.1 CDS zinT NC_000913.3 2041375 2042025 D zinc and cadmium binding protein, periplasmic 2041375..2042025 Escherichia coli str. K-12 substr. MG1655 946480 NP_416483.4 CDS yodB NC_000913.3 2042368 2042898 D cytochrome b561 homolog 1; cytochrome b561 homolog 2042368..2042898 Escherichia coli str. K-12 substr. MG1655 946491 NP_416484.2 CDS mtfA NC_000913.3 2043651 2044448 D anti-repressor for DgsA(Mlc) 2043651..2044448 Escherichia coli str. K-12 substr. MG1655 946489 NP_416485.4 CDS yeeJ NC_000913.3 2044938 2052014 D putative factor; putative adhesin 2044938..2052014 Escherichia coli str. K-12 substr. MG1655 946498 b4497 CDS yeeL NC_000913.3 2052276 2053328 R pseudogene, glycosyltransferase homology; complement(2052276..2053328) Escherichia coli str. K-12 substr. MG1655 2847764 NP_416488.1 CDS shiA NC_000913.3 2053643 2054959 D shikimate transporter 2053643..2054959 Escherichia coli str. K-12 substr. MG1655 946495 NP_416489.1 CDS amn NC_000913.3 2055061 2056515 D AMP nucleosidase 2055061..2056515 Escherichia coli str. K-12 substr. MG1655 946508 NP_416490.1 CDS yeeN NC_000913.3 2056858 2057574 D UPF0082 family protein 2056858..2057574 Escherichia coli str. K-12 substr. MG1655 946493 NP_416491.2 CDS yeeO NC_000913.3 2058203 2059690 R putative multdrug exporter, MATE family complement(2058203..2059690) Escherichia coli str. K-12 substr. MG1655 946506 NP_416492.1 CDS cbl NC_000913.3 2059964 2060914 R transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM; ssuEADCB/tauABCD operon transcriptional activator complement(2059964..2060914) Escherichia coli str. K-12 substr. MG1655 946502 NP_416493.1 CDS nac NC_000913.3 2061016 2061933 R nitrogen assimilation control protein; nitrogen assimilation regulon transcriptional regulator; autorepressor complement(2061016..2061933) Escherichia coli str. K-12 substr. MG1655 946501 NP_416494.1 CDS ldtA NC_000913.3 2062391 2063323 R L,D-transpeptidase linking Lpp to murein complement(2062391..2063323) Escherichia coli str. K-12 substr. MG1655 945273 NP_416495.1 CDS cobT NC_000913.3 2063388 2064467 R nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2063388..2064467) Escherichia coli str. K-12 substr. MG1655 946517 NP_416496.1 CDS cobS NC_000913.3 2064479 2065222 R cobalamin synthase complement(2064479..2065222) Escherichia coli str. K-12 substr. MG1655 946520 NP_416497.1 CDS cobU NC_000913.3 2065219 2065764 R cobinamide kinase/cobinamide phosphate guanylyltransferase; bifunctional cobinamide kinase/ cobinamide phosphate guanylyltransferase complement(2065219..2065764) Escherichia coli str. K-12 substr. MG1655 946519 b4639 CDS yeeH NC_000913.3 2066068 2066154 R pseudogene; complement(2066068..2066154) Escherichia coli str. K-12 substr. MG1655 5625565 NP_416498.1 CDS insH1 NC_000913.3 2066305 2067321 R IS5 transposase and trans-activator complement(2066305..2067321) Escherichia coli str. K-12 substr. MG1655 946507 b4640 CDS yoeG NC_000913.3 2067360 2067892 R pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; complement(join(2067360..2067458,2067458..2067892)) Escherichia coli str. K-12 substr. MG1655 5625566 b4641 CDS yoeH NC_000913.3 2068261 2068419 R pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; complement(2068261..2068419) Escherichia coli str. K-12 substr. MG1655 5625567 b4582 CDS yoeA NC_000913.3 2068635 2070474 D CP4-44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C-terminal deletion; join(2068635..2068938,2070270..2070474) Escherichia coli str. K-12 substr. MG1655 4056042 NP_416500.1 CDS insD1 NC_000913.3 2068952 2069857 R IS2 transposase TnpB complement(2068952..2069857) Escherichia coli str. K-12 substr. MG1655 946403 YP_026163.2 CDS insC1 NC_000913.3 2069815 2070180 R IS2 repressor TnpA complement(2069815..2070180) Escherichia coli str. K-12 substr. MG1655 946455 b1999 CDS yeeP NC_000913.3 2070660 2071211 D pseudogene, CP4-44 prophage; 50S ribosome-binding GTPase family;Phage or Prophage Related; putative histone; 2070660..2071211 Escherichia coli str. K-12 substr. MG1655 946524 YP_026164.1 CDS flu NC_000913.3 2071539 2074658 D antigen 43, phase-variable bipartite outer membrane fluffing protein; CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter 2071539..2074658 Escherichia coli str. K-12 substr. MG1655 946540 NP_416505.2 CDS yeeR NC_000913.3 2074779 2076311 D CP4-44 prophage; putative membrane protein 2074779..2076311 Escherichia coli str. K-12 substr. MG1655 946512 NP_416506.1 CDS yeeS NC_000913.3 2076308 2076754 D putative DNA repair protein, RADC family; CP4-44 prophage; putative DNA repair protein 2076308..2076754 Escherichia coli str. K-12 substr. MG1655 946514 NP_416507.1 CDS yeeT NC_000913.3 2076817 2077038 D CP4-44 prophage; uncharacterized protein 2076817..2077038 Escherichia coli str. K-12 substr. MG1655 946513 NP_416508.1 CDS cbeA NC_000913.3 2077112 2077480 D putative structural protein; CP4-44 prophage; cytoskeleton bundling-enhancing factor A; CbtA antitoxin 2077112..2077480 Escherichia coli str. K-12 substr. MG1655 946510 NP_416509.1 CDS cbtA NC_000913.3 2077569 2077943 D CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system 2077569..2077943 Escherichia coli str. K-12 substr. MG1655 946534 b2006 CDS yeeW NC_000913.3 2077940 2078107 D CP4-44 prophage; uncharacterized protein;Phage or Prophage Related; 2077940..2078107 Escherichia coli str. K-12 substr. MG1655 946535 b4642 CDS yoeD NC_000913.3 2078549 2078677 R pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; complement(2078549..2078677) Escherichia coli str. K-12 substr. MG1655 5625568 b4538 CDS yoeF NC_000913.3 2078746 2078931 D pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; 2078746..2078931 Escherichia coli str. K-12 substr. MG1655 1450273 NP_416511.4 CDS yeeX NC_000913.3 2079032 2079361 R putative alpha helix protein; UPF0265 family protein complement(2079032..2079361) Escherichia coli str. K-12 substr. MG1655 946541 NP_416512.1 CDS yeeA NC_000913.3 2079533 2080591 R putative transporter, FUSC family inner membrane protein complement(2079533..2080591) Escherichia coli str. K-12 substr. MG1655 946545 NP_416513.1 CDS sbmC NC_000913.3 2080789 2081262 R SbmC protein; DNA gyrase inhibitor complement(2080789..2081262) Escherichia coli str. K-12 substr. MG1655 946546 NP_416514.4 CDS dacD NC_000913.3 2081381 2082547 R penicillin binding protein 6b; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) complement(2081381..2082547) Escherichia coli str. K-12 substr. MG1655 946518 NP_416515.1 CDS sbcB NC_000913.3 2082756 2084183 D exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase; exodeoxyribonuclease I; exonuclease I 2082756..2084183 Escherichia coli str. K-12 substr. MG1655 946529 NP_416516.1 CDS yeeD NC_000913.3 2084226 2084453 R putative TusA family sulfurtransferase complement(2084226..2084453) Escherichia coli str. K-12 substr. MG1655 946539 NP_416517.1 CDS yeeE NC_000913.3 2084467 2085525 R putative transport system permease protein; UPF0394 family inner membrane protein complement(2084467..2085525) Escherichia coli str. K-12 substr. MG1655 946526 NP_416518.2 CDS plaP NC_000913.3 2085704 2087062 R putative amino acid/amine transport protein; putrescine importer, low affinity complement(2085704..2087062) Escherichia coli str. K-12 substr. MG1655 946533 YP_002791246.1 CDS yoeI NC_000913.3 2087052 2087114 R uncharacterized protein complement(2087052..2087114) Escherichia coli str. K-12 substr. MG1655 7751643 NP_416519.4 CDS yeeY NC_000913.3 2087329 2088258 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(2087329..2088258) Escherichia coli str. K-12 substr. MG1655 946532 NP_416520.1 CDS yeeZ NC_000913.3 2088304 2089128 R putative enzyme of sugar metabolism; putative epimerase complement(2088304..2089128) Escherichia coli str. K-12 substr. MG1655 946538 YP_588458.1 CDS yoeB NC_000913.3 2089211 2089465 R toxin of the YoeB-YefM toxin-antitoxin system complement(2089211..2089465) Escherichia coli str. K-12 substr. MG1655 1450274 NP_416521.2 CDS yefM NC_000913.3 2089462 2089713 R antitoxin of the YoeB-YefM toxin-antitoxin system complement(2089462..2089713) Escherichia coli str. K-12 substr. MG1655 946542 NP_416522.1 CDS hisL NC_000913.3 2089996 2090046 D his operon leader peptide 2089996..2090046 Escherichia coli str. K-12 substr. MG1655 946547 NP_416523.1 CDS hisG NC_000913.3 2090192 2091091 D ATP phosphoribosyltransferase 2090192..2091091 Escherichia coli str. K-12 substr. MG1655 946549 NP_416524.1 CDS hisD NC_000913.3 2091097 2092401 D L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase; bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 2091097..2092401 Escherichia coli str. K-12 substr. MG1655 946531 NP_416525.1 CDS hisC NC_000913.3 2092398 2093468 D histidinol-phosphate aminotransferase 2092398..2093468 Escherichia coli str. K-12 substr. MG1655 946551 NP_416526.4 CDS hisB NC_000913.3 2093468 2094535 D imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase; fused histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase 2093468..2094535 Escherichia coli str. K-12 substr. MG1655 946552 NP_416527.1 CDS hisH NC_000913.3 2094535 2095125 D glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzyme; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF 2094535..2095125 Escherichia coli str. K-12 substr. MG1655 946544 NP_416528.2 CDS hisA NC_000913.3 2095125 2095862 D N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase 2095125..2095862 Escherichia coli str. K-12 substr. MG1655 946521 NP_416529.1 CDS hisF NC_000913.3 2095844 2096620 D imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme; imidazole glycerol phosphate synthase, catalytic subunit with HisH 2095844..2096620 Escherichia coli str. K-12 substr. MG1655 946516 NP_416530.1 CDS hisI NC_000913.3 2096614 2097225 D phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase; fused phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 2096614..2097225 Escherichia coli str. K-12 substr. MG1655 946515 NP_416531.4 CDS wzzB NC_000913.3 2097321 2098301 R regulator of length of O-antigen component of lipopolysaccharide chains complement(2097321..2098301) Escherichia coli str. K-12 substr. MG1655 946553 NP_416532.1 CDS ugd NC_000913.3 2098447 2099613 R UDP-glucose 6-dehydrogenase complement(2098447..2099613) Escherichia coli str. K-12 substr. MG1655 946571 NP_416533.1 CDS gnd NC_000913.3 2099862 2101268 R 6-phosphogluconate dehydrogenase, decarboxylating complement(2099862..2101268) Escherichia coli str. K-12 substr. MG1655 946554 b4571 CDS wbbL NC_000913.3 2101396 2103389 R lipopolysaccharide biosynthesis protein, N-ter fragment (pseudogene); complement(join(2101396..2101744,2102944..2103389)) Escherichia coli str. K-12 substr. MG1655 4056030 NP_416535.1 CDS insH1 NC_000913.3 2101895 2102911 R IS5 transposase and trans-activator complement(2101895..2102911) Escherichia coli str. K-12 substr. MG1655 946577 NP_416536.1 CDS wbbK NC_000913.3 2103391 2104509 R putative glucose transferase; lipopolysaccharide biosynthesis protein complement(2103391..2104509) Escherichia coli str. K-12 substr. MG1655 946555 NP_416537.1 CDS wbbJ NC_000913.3 2104494 2105084 R putative O-acetyl transferase; putative lipopolysaccharide biosynthesis O-acetyl transferase complement(2104494..2105084) Escherichia coli str. K-12 substr. MG1655 946556 NP_416538.1 CDS wbbI NC_000913.3 2105065 2106057 R putative Galf transferase; d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase complement(2105065..2106057) Escherichia coli str. K-12 substr. MG1655 947041 NP_416539.1 CDS wbbH NC_000913.3 2106060 2107226 R O-antigen polymerase complement(2106060..2107226) Escherichia coli str. K-12 substr. MG1655 945179 NP_416540.1 CDS glf NC_000913.3 2107226 2108329 R UDP-galactopyranose mutase; UDP-galactopyranose mutase, FAD/NAD(P)-binding complement(2107226..2108329) Escherichia coli str. K-12 substr. MG1655 945235 NP_416541.1 CDS wzxB NC_000913.3 2108337 2109584 R putative O-antigen transporter; putative polisoprenol-linked O-antigen transporter complement(2108337..2109584) Escherichia coli str. K-12 substr. MG1655 946557 NP_416542.1 CDS rfbC NC_000913.3 2109581 2110138 R dTDP-6-deoxy-D-glucose-3,5 epimerase; dTDP-4-deoxyrhamnose-3,5-epimerase complement(2109581..2110138) Escherichia coli str. K-12 substr. MG1655 947482 NP_416543.1 CDS rfbA NC_000913.3 2110138 2111019 R dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase complement(2110138..2111019) Escherichia coli str. K-12 substr. MG1655 945154 NP_416544.1 CDS rfbD NC_000913.3 2111077 2111976 R dTDP-6-deoxy-L-mannose-dehydrogenase; dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase complement(2111077..2111976) Escherichia coli str. K-12 substr. MG1655 947117 NP_416545.1 CDS rfbB NC_000913.3 2111976 2113061 R dTDP-glucose 4,6 dehydratase; dTDP-glucose 4,6 dehydratase, NAD(P)-binding complement(2111976..2113061) Escherichia coli str. K-12 substr. MG1655 945276 NP_416546.1 CDS wcaN NC_000913.3 2113434 2114327 R putative regulatory subunit for GalU complement(2113434..2114327) Escherichia coli str. K-12 substr. MG1655 946560 NP_416547.1 CDS wcaM NC_000913.3 2114502 2115896 R putative colanic acid biosynthesis protein; colanic acid biosynthesis protein complement(2114502..2115896) Escherichia coli str. K-12 substr. MG1655 946561 NP_416548.1 CDS wcaL NC_000913.3 2115907 2117127 R putative colanic acid biosynthesis glycosyl transferase; putative glycosyl transferase complement(2115907..2117127) Escherichia coli str. K-12 substr. MG1655 946565 NP_416549.1 CDS wcaK NC_000913.3 2117124 2118404 R putative galactokinase; colanic acid biosynthesis protein complement(2117124..2118404) Escherichia coli str. K-12 substr. MG1655 946569 NP_416550.1 CDS wzxC NC_000913.3 2118680 2120158 R probable export protein; putative colanic acid exporter complement(2118680..2120158) Escherichia coli str. K-12 substr. MG1655 946581 NP_416551.1 CDS wcaJ NC_000913.3 2120160 2121554 R putative UDP-glucose lipid carrier transferase; colanic biosynthesis UDP-glucose lipid carrier transferase complement(2120160..2121554) Escherichia coli str. K-12 substr. MG1655 946583 NP_416552.1 CDS cpsG NC_000913.3 2121609 2122979 R phosphomannomutase complement(2121609..2122979) Escherichia coli str. K-12 substr. MG1655 946574 NP_416553.1 CDS cpsB NC_000913.3 2123084 2124520 R mannose-1-phosphate guanyltransferase complement(2123084..2124520) Escherichia coli str. K-12 substr. MG1655 946580 NP_416554.1 CDS wcaI NC_000913.3 2124523 2125746 R putative colanic biosynthesis glycosyl transferase; putative glycosyl transferase complement(2124523..2125746) Escherichia coli str. K-12 substr. MG1655 946588 NP_416555.2 CDS wcaH NC_000913.3 2125743 2126222 R GDP-mannose mannosyl hydrolase complement(2125743..2126222) Escherichia coli str. K-12 substr. MG1655 946559 NP_416556.1 CDS wcaG NC_000913.3 2126225 2127190 R bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase complement(2126225..2127190) Escherichia coli str. K-12 substr. MG1655 946563 NP_416557.1 CDS gmd NC_000913.3 2127193 2128314 R GDP-D-mannose dehydratase, NAD(P)-binding complement(2127193..2128314) Escherichia coli str. K-12 substr. MG1655 946562 NP_416558.1 CDS wcaF NC_000913.3 2128340 2128888 R putative transferase; putative acyl transferase complement(2128340..2128888) Escherichia coli str. K-12 substr. MG1655 946578 NP_416559.1 CDS wcaE NC_000913.3 2128904 2129650 R putative colanic acid biosynthesis glycosyl transferase; putative glycosyl transferase complement(2128904..2129650) Escherichia coli str. K-12 substr. MG1655 946543 NP_416560.1 CDS wcaD NC_000913.3 2129661 2130878 R putative colanic acid polymerase complement(2129661..2130878) Escherichia coli str. K-12 substr. MG1655 946550 NP_416561.1 CDS wcaC NC_000913.3 2130853 2132070 R putative glycosyl transferase complement(2130853..2132070) Escherichia coli str. K-12 substr. MG1655 946579 NP_416562.1 CDS wcaB NC_000913.3 2132067 2132555 R putative transferase; putative acyl transferase complement(2132067..2132555) Escherichia coli str. K-12 substr. MG1655 946573 NP_416563.1 CDS wcaA NC_000913.3 2132558 2133397 R putative regulator; putative glycosyl transferase complement(2132558..2133397) Escherichia coli str. K-12 substr. MG1655 946570 NP_416564.4 CDS wzc NC_000913.3 2133490 2135652 R colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase complement(2133490..2135652) Escherichia coli str. K-12 substr. MG1655 946567 NP_416565.1 CDS wzb NC_000913.3 2135655 2136098 R low molecular weight protein-tyrosine-phosphatase; colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase complement(2135655..2136098) Escherichia coli str. K-12 substr. MG1655 946564 NP_416566.1 CDS wza NC_000913.3 2136104 2137243 R putative polysaccharide export protein; colanic acid export protein; outer membrane auxillary lipoprotein complement(2136104..2137243) Escherichia coli str. K-12 substr. MG1655 946558 NP_416567.4 CDS yegH NC_000913.3 2137902 2139485 D putative transport protein; inner membrane protein 2137902..2139485 Escherichia coli str. K-12 substr. MG1655 946566 NP_416568.1 CDS asmA NC_000913.3 2139759 2141612 R suppressor of ompF assembly mutants; suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein complement(2139759..2141612) Escherichia coli str. K-12 substr. MG1655 946582 NP_416569.1 CDS dcd NC_000913.3 2141634 2142215 R 2'-deoxycytidine 5'-triphosphate deaminase complement(2141634..2142215) Escherichia coli str. K-12 substr. MG1655 946593 NP_416570.2 CDS udk NC_000913.3 2142307 2142948 R uridine/cytidine kinase complement(2142307..2142948) Escherichia coli str. K-12 substr. MG1655 946597 NP_416571.1 CDS yegE NC_000913.3 2143266 2146583 D putative sensor-type protein; putative diguanylate cyclase 2143266..2146583 Escherichia coli str. K-12 substr. MG1655 946600 NP_416572.1 CDS alkA NC_000913.3 2146692 2147540 R 3-methyl-adenine DNA glycosylase II, inducible; 3-methyl-adenine DNA glycosylase II complement(2146692..2147540) Escherichia coli str. K-12 substr. MG1655 947371 NP_416573.4 CDS yegD NC_000913.3 2147674 2149026 D putative heat shock protein; Hsp70 chaperone family protein 2147674..2149026 Escherichia coli str. K-12 substr. MG1655 947234 NP_416574.1 CDS yegI NC_000913.3 2149039 2150985 R putative chaperonin; protein kinase-related putative non-specific DNA-binding protein complement(2149039..2150985) Escherichia coli str. K-12 substr. MG1655 947159 NP_416575.1 CDS yegJ NC_000913.3 2151185 2151646 D uncharacterized protein 2151185..2151646 Escherichia coli str. K-12 substr. MG1655 947201 NP_416576.1 CDS yegK NC_000913.3 2151711 2152472 R ser/thr phosphatase-related protein complement(2151711..2152472) Escherichia coli str. K-12 substr. MG1655 947269 NP_416577.1 CDS yegL NC_000913.3 2152469 2153128 R VMA domain protein complement(2152469..2153128) Escherichia coli str. K-12 substr. MG1655 946602 YP_002791247.1 CDS ibsA NC_000913.3 2153349 2153408 R toxic membrane protein complement(2153349..2153408) Escherichia coli str. K-12 substr. MG1655 7751625 YP_002791248.1 CDS ibsB NC_000913.3 2153681 2153737 R toxic membrane protein complement(2153681..2153737) Escherichia coli str. K-12 substr. MG1655 7751626 NP_416578.2 CDS mdtA NC_000913.3 2154016 2155263 D putative membrane protein; multidrug efflux system, subunit A 2154016..2155263 Escherichia coli str. K-12 substr. MG1655 946604 NP_416579.1 CDS mdtB NC_000913.3 2155263 2158385 D multidrug efflux system, subunit B 2155263..2158385 Escherichia coli str. K-12 substr. MG1655 946606 NP_416580.1 CDS mdtC NC_000913.3 2158386 2161463 D multidrug efflux system, subunit C 2158386..2161463 Escherichia coli str. K-12 substr. MG1655 946608 NP_416581.1 CDS mdtD NC_000913.3 2161464 2162879 D putative transport protein; putative arabinose efflux transporter 2161464..2162879 Escherichia coli str. K-12 substr. MG1655 946601 NP_416582.1 CDS baeS NC_000913.3 2162876 2164279 D sensor protein (for BaeR); sensory histidine kinase in two-component regulatory system with BaeR 2162876..2164279 Escherichia coli str. K-12 substr. MG1655 946611 NP_416583.1 CDS baeR NC_000913.3 2164276 2164998 D transcriptional response regulatory protein (sensor BaeS); response regulator in two-component regulatory system with BaeS 2164276..2164998 Escherichia coli str. K-12 substr. MG1655 946605 NP_416584.4 CDS yegP NC_000913.3 2165189 2165521 D UPF0339 family protein 2165189..2165521 Escherichia coli str. K-12 substr. MG1655 947095 NP_416585.1 CDS yegQ NC_000913.3 2165668 2167029 D putative peptidase 2165668..2167029 Escherichia coli str. K-12 substr. MG1655 946609 NP_416586.1 CDS ogrK NC_000913.3 2167302 2167520 R prophage P2 ogr protein; positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome) complement(2167302..2167520) Escherichia coli str. K-12 substr. MG1655 945404 b2083 CDS yegZ NC_000913.3 2167602 2167814 R pseudogene, gpD phage P2-like protein D; complement(2167602..2167814) Escherichia coli str. K-12 substr. MG1655 949050 NP_416589.2 CDS yegR NC_000913.3 2167989 2168306 R uncharacterized protein complement(2167989..2168306) Escherichia coli str. K-12 substr. MG1655 946613 NP_416590.1 CDS yegS NC_000913.3 2168712 2169611 D phosphatidylglycerol kinase, metal-dependent 2168712..2169611 Escherichia coli str. K-12 substr. MG1655 946626 b4498 CDS gatR NC_000913.3 2169693 2171727 R pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted; complement(join(2169693..2170167,2171429..2171727)) Escherichia coli str. K-12 substr. MG1655 2847672 NP_416592.2 CDS insE1 NC_000913.3 2170236 2170535 D IS3 transposase A 2170236..2170535 Escherichia coli str. K-12 substr. MG1655 946616 NP_416593.1 CDS insF1 NC_000913.3 2170532 2171398 D IS3 transposase B 2170532..2171398 Escherichia coli str. K-12 substr. MG1655 946629 NP_416594.1 CDS gatD NC_000913.3 2171833 2172873 R galactitol-1-phosphate dehydrogenase; galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding complement(2171833..2172873) Escherichia coli str. K-12 substr. MG1655 946598 b2092 CDS gatC NC_000913.3 2172921 2174278 R pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC; complement(join(2172921..2173362,2173365..2174278)) Escherichia coli str. K-12 substr. MG1655 946603 NP_416596.1 CDS gatB NC_000913.3 2174282 2174566 R galactitol-specific enzyme IIB of phosphotransferase system; galactitol-specific enzyme IIB component of PTS complement(2174282..2174566) Escherichia coli str. K-12 substr. MG1655 946610 NP_416597.1 CDS gatA NC_000913.3 2174597 2175049 R galactitol-specific enzyme IIA of phosphotransferase system; galactitol-specific enzyme IIA component of PTS complement(2174597..2175049) Escherichia coli str. K-12 substr. MG1655 946633 NP_416598.1 CDS gatZ NC_000913.3 2175059 2176321 R putative tagatose 6-phosphate kinase 1; D-tagatose 1,6-bisphosphate aldolase 2, subunit complement(2175059..2176321) Escherichia coli str. K-12 substr. MG1655 946641 NP_416599.2 CDS gatY NC_000913.3 2176350 2177204 R tagatose-bisphosphate aldolase 1; D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit complement(2176350..2177204) Escherichia coli str. K-12 substr. MG1655 946636 NP_416600.4 CDS fbaB NC_000913.3 2177512 2178564 R fructose-bisphosphate aldolase class I complement(2177512..2178564) Escherichia coli str. K-12 substr. MG1655 946632 NP_416601.1 CDS yegT NC_000913.3 2178821 2180098 D putative nucleoside permease protein; nucleoside transporter, low affinity 2178821..2180098 Escherichia coli str. K-12 substr. MG1655 946638 NP_416602.1 CDS yegU NC_000913.3 2180095 2181099 D ADP-ribosylglycohydrolase family protein 2180095..2181099 Escherichia coli str. K-12 substr. MG1655 946630 NP_416603.1 CDS yegV NC_000913.3 2181096 2182061 D putative kinase 2181096..2182061 Escherichia coli str. K-12 substr. MG1655 946637 NP_416604.1 CDS yegW NC_000913.3 2182035 2182781 R putative transcriptional regulator; putative DNA-binding transcriptional regulator complement(2182035..2182781) Escherichia coli str. K-12 substr. MG1655 946639 NP_416605.2 CDS yegX NC_000913.3 2182833 2183651 R putative family 25 glycosyl hydrolase complement(2182833..2183651) Escherichia coli str. K-12 substr. MG1655 945543 NP_416606.1 CDS thiD NC_000913.3 2183716 2184516 R phosphomethylpyrimidine kinase; bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase complement(2183716..2184516) Escherichia coli str. K-12 substr. MG1655 946459 NP_416607.1 CDS thiM NC_000913.3 2184513 2185301 R hydoxyethylthiazole kinase complement(2184513..2185301) Escherichia coli str. K-12 substr. MG1655 945142 NP_416608.1 CDS rcnR NC_000913.3 2185524 2185796 R transcriptional repressor of rcnA complement(2185524..2185796) Escherichia coli str. K-12 substr. MG1655 947114 NP_416609.1 CDS rcnA NC_000913.3 2185917 2186741 D membrane protein conferring nickel and cobalt resistance 2185917..2186741 Escherichia coli str. K-12 substr. MG1655 949078 NP_416610.4 CDS rcnB NC_000913.3 2186960 2187298 D periplasmic modulator of Ni and Co efflux 2186960..2187298 Escherichia coli str. K-12 substr. MG1655 949080 NP_416611.1 CDS yehA NC_000913.3 2187380 2188414 R putative type-1 fimbrial protein; putative fimbrial-like adhesin protein complement(2187380..2188414) Escherichia coli str. K-12 substr. MG1655 946642 NP_416612.1 CDS yehB NC_000913.3 2188430 2190910 R putative outer membrane protein complement(2188430..2190910) Escherichia coli str. K-12 substr. MG1655 946617 NP_416613.1 CDS yehC NC_000913.3 2190926 2191645 R putative chaperone; putative periplasmic pilin chaperone complement(2190926..2191645) Escherichia coli str. K-12 substr. MG1655 946621 NP_416614.1 CDS yehD NC_000913.3 2191680 2192222 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(2191680..2192222) Escherichia coli str. K-12 substr. MG1655 946619 NP_416615.1 CDS yehE NC_000913.3 2192515 2192796 R DUF2574 family protein complement(2192515..2192796) Escherichia coli str. K-12 substr. MG1655 946615 NP_416616.4 CDS mrp NC_000913.3 2193059 2194168 R putative ATPase; antiporter inner membrane protein complement(2193059..2194168) Escherichia coli str. K-12 substr. MG1655 946627 NP_416617.1 CDS metG NC_000913.3 2194300 2196333 D methionine tRNA synthetase; methionyl-tRNA synthetase 2194300..2196333 Escherichia coli str. K-12 substr. MG1655 946643 b4499 CDS yehH NC_000913.3 2196474 2200269 D DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function; join(2196474..2199320,2199322..2200269) Escherichia coli str. K-12 substr. MG1655 2847726 NP_416621.1 CDS yehI NC_000913.3 2200279 2203911 D putative regulator; DUF4132 domain-containing protein 2200279..2203911 Escherichia coli str. K-12 substr. MG1655 946649 YP_588459.1 CDS yehK NC_000913.3 2203972 2204289 D uncharacterized protein 2203972..2204289 Escherichia coli str. K-12 substr. MG1655 4056035 NP_416623.2 CDS yehL NC_000913.3 2204596 2205684 D putative ABC superfamily transporter ATP-binding subunit 2204596..2205684 Escherichia coli str. K-12 substr. MG1655 946656 NP_416624.1 CDS yehM NC_000913.3 2205695 2207974 D uncharacterized protein 2205695..2207974 Escherichia coli str. K-12 substr. MG1655 946651 NP_416625.1 CDS yehP NC_000913.3 2207967 2209103 D VMA domain putative YehL ATPase stimulator 2207967..2209103 Escherichia coli str. K-12 substr. MG1655 946652 b2122 CDS yehQ NC_000913.3 2209100 2211100 D pseudogene; 2209100..2211100 Escherichia coli str. K-12 substr. MG1655 946654 NP_416627.2 CDS yehR NC_000913.3 2211225 2211686 D lipoprotein, DUF1307 family 2211225..2211686 Escherichia coli str. K-12 substr. MG1655 949023 NP_416628.1 CDS yehS NC_000913.3 2211726 2212196 R DUF1456 family protein complement(2211726..2212196) Escherichia coli str. K-12 substr. MG1655 949026 NP_416629.4 CDS yehT NC_000913.3 2212243 2212962 R putative response regulator in two-component system withYehU complement(2212243..2212962) Escherichia coli str. K-12 substr. MG1655 949024 NP_416630.1 CDS yehU NC_000913.3 2212959 2214644 R putative 2-component sensor protein; inner membrane putative sensory kinase in two-component system with YehT complement(2212959..2214644) Escherichia coli str. K-12 substr. MG1655 949027 NP_416631.1 CDS mlrA NC_000913.3 2214866 2215597 D putative transcriptional regulator; transcriptional activator of csgD and csgBA 2214866..2215597 Escherichia coli str. K-12 substr. MG1655 949029 YP_588460.1 CDS yohO NC_000913.3 2215657 2215764 D putative membrane protein 2215657..2215764 Escherichia coli str. K-12 substr. MG1655 1450279 NP_416632.1 CDS yehW NC_000913.3 2215745 2216476 R putative transport system permease protein; inner membrane putative ABC superfamily transporter permease complement(2215745..2216476) Escherichia coli str. K-12 substr. MG1655 949028 NP_416633.1 CDS yehX NC_000913.3 2216481 2217407 R putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit complement(2216481..2217407) Escherichia coli str. K-12 substr. MG1655 946659 NP_416634.1 CDS yehY NC_000913.3 2217400 2218557 R putative transport system permease protein; inner membrane putative ABC superfamily transporter permease complement(2217400..2218557) Escherichia coli str. K-12 substr. MG1655 946660 NP_416635.1 CDS osmF NC_000913.3 2218564 2219481 R putative transport system permease protein; putative ABC superfamily transporter periplasmic-binding protein complement(2218564..2219481) Escherichia coli str. K-12 substr. MG1655 946681 NP_416636.1 CDS bglX NC_000913.3 2219692 2221989 R beta-D-glucoside glucohydrolase, periplasmic complement(2219692..2221989) Escherichia coli str. K-12 substr. MG1655 946682 NP_416637.1 CDS dld NC_000913.3 2222185 2223900 D D-lactate dehydrogenase, FAD protein, NADH independent; D-lactate dehydrogenase, FAD-binding, NADH independent 2222185..2223900 Escherichia coli str. K-12 substr. MG1655 946653 NP_416638.4 CDS pbpG NC_000913.3 2223938 2224870 R penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase complement(2223938..2224870) Escherichia coli str. K-12 substr. MG1655 946662 NP_416639.2 CDS yohC NC_000913.3 2225044 2225631 R Yip1 family inner membrane protein complement(2225044..2225631) Escherichia coli str. K-12 substr. MG1655 946666 NP_416640.2 CDS yohD NC_000913.3 2225801 2226379 D DedA family inner membrane protein 2225801..2226379 Escherichia coli str. K-12 substr. MG1655 946661 NP_416641.1 CDS yohF NC_000913.3 2226509 2227270 R putative oxidoreductase complement(2226509..2227270) Escherichia coli str. K-12 substr. MG1655 949126 b2139 CDS mdtQ NC_000913.3 2227323 2228758 R pseudogene; putative channel/filament proteins; complement(join(2227323..2228609,2228609..2228758)) Escherichia coli str. K-12 substr. MG1655 949123 YP_002791249.1 CDS yohP NC_000913.3 2228982 2229065 D uncharacterized protein 2228982..2229065 Escherichia coli str. K-12 substr. MG1655 7751636 NP_416645.1 CDS dusC NC_000913.3 2229438 2230385 R putative regulator protein; tRNA-dihydrouridine synthase C complement(2229438..2230385) Escherichia coli str. K-12 substr. MG1655 945458 NP_416646.1 CDS yohJ NC_000913.3 2230624 2231022 D UPF0299 family inner membrane protein 2230624..2231022 Escherichia coli str. K-12 substr. MG1655 949127 NP_416647.1 CDS yohK NC_000913.3 2231019 2231714 D putative seritonin transporter; LrgB family inner membrane protein 2231019..2231714 Escherichia coli str. K-12 substr. MG1655 949125 NP_416648.1 CDS cdd NC_000913.3 2231844 2232728 D cytidine/deoxycytidine deaminase 2231844..2232728 Escherichia coli str. K-12 substr. MG1655 946663 NP_416649.1 CDS sanA NC_000913.3 2232878 2233597 D vancomycin sensitivity; sanA mutant has a defective envelope more permeable to vancomycin at 42 degrees; vancomycin high temperature exclusion protein, DUF218 superfamily protein 2232878..2233597 Escherichia coli str. K-12 substr. MG1655 949003 NP_416650.1 CDS yeiS NC_000913.3 2233600 2233839 D DUF2542 family protein 2233600..2233839 Escherichia coli str. K-12 substr. MG1655 948983 NP_416651.1 CDS preT NC_000913.3 2234033 2235271 D putative oxidoreductase; dihydropyrimidine dehydrogenase, NADH-dependent, subunit N 2234033..2235271 Escherichia coli str. K-12 substr. MG1655 949049 NP_416652.4 CDS preA NC_000913.3 2235265 2236500 D putative oxidoreductase; dihydropyrimidine dehydrogenase, NADH-dependent, subunit C 2235265..2236500 Escherichia coli str. K-12 substr. MG1655 949037 NP_416653.1 CDS mglC NC_000913.3 2236743 2237753 R methyl-galactoside transport and galactose taxis; membrane component of ABC superfamily; methyl-galactoside transporter subunit complement(2236743..2237753) Escherichia coli str. K-12 substr. MG1655 949039 NP_416654.1 CDS mglA NC_000913.3 2237769 2239289 R ATP-binding component of methyl-galactoside transport and galactose taxis; fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components complement(2237769..2239289) Escherichia coli str. K-12 substr. MG1655 949036 NP_416655.1 CDS mglB NC_000913.3 2239350 2240348 R galactose-binding transport protein; receptor for galactose taxis; periplasmic-binding component of ABC superfamily; methyl-galactoside transporter subunit complement(2239350..2240348) Escherichia coli str. K-12 substr. MG1655 949041 NP_416656.1 CDS galS NC_000913.3 2240628 2241668 R mgl repressor, galactose operon inducer; galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor complement(2240628..2241668) Escherichia coli str. K-12 substr. MG1655 949043 NP_416657.1 CDS yeiB NC_000913.3 2241810 2242967 R DUF418 family putative inner membrane protein complement(2241810..2242967) Escherichia coli str. K-12 substr. MG1655 949044 NP_416658.1 CDS folE NC_000913.3 2242984 2243652 R GTP cyclohydrolase I complement(2242984..2243652) Escherichia coli str. K-12 substr. MG1655 949040 NP_416659.1 CDS yeiG NC_000913.3 2243910 2244746 D putative esterase; S-formylglutathione hydrolase 2243910..2244746 Escherichia coli str. K-12 substr. MG1655 949045 NP_416660.1 CDS cirA NC_000913.3 2244778 2246769 R ferric iron outer membrane transporter, TonB-dependent; surface receptor and translocator for colicin I; colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter complement(2244778..2246769) Escherichia coli str. K-12 substr. MG1655 949042 NP_416661.1 CDS lysP NC_000913.3 2247063 2248532 R lysine-specific permease; lysine transporter complement(2247063..2248532) Escherichia coli str. K-12 substr. MG1655 946667 NP_416662.1 CDS yeiE NC_000913.3 2248737 2249618 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(2248737..2249618) Escherichia coli str. K-12 substr. MG1655 946657 NP_416663.1 CDS yeiH NC_000913.3 2249717 2250766 D UPF0324 family inner membrane protein 2249717..2250766 Escherichia coli str. K-12 substr. MG1655 946668 NP_416664.1 CDS nfo NC_000913.3 2250840 2251697 D endonuclease IV; endonuclease IV with intrinsic 3'-5' exonuclease activity 2250840..2251697 Escherichia coli str. K-12 substr. MG1655 946669 NP_416665.1 CDS yeiI NC_000913.3 2251700 2252788 D putative kinase 2251700..2252788 Escherichia coli str. K-12 substr. MG1655 946640 NP_416666.1 CDS nupX NC_000913.3 2252895 2254145 R putative pyrimidine nucleoside transporter; nucleoside permease complement(2252895..2254145) Escherichia coli str. K-12 substr. MG1655 946655 NP_416667.1 CDS rihB NC_000913.3 2254245 2255186 R ribonucleoside hydrolase 2 complement(2254245..2255186) Escherichia coli str. K-12 substr. MG1655 946646 NP_416668.3 CDS yeiL NC_000913.3 2255355 2256014 D stationary phase nitrogen starvation regulator; putative transcriptional regulator 2255355..2256014 Escherichia coli str. K-12 substr. MG1655 946670 NP_416669.1 CDS psuT NC_000913.3 2256085 2257335 R putative transport system permease protein; putative nucleoside transporter complement(2256085..2257335) Escherichia coli str. K-12 substr. MG1655 946671 NP_416670.1 CDS psuG NC_000913.3 2257429 2258367 R pseudouridine 5'-phosphate glycosidase complement(2257429..2258367) Escherichia coli str. K-12 substr. MG1655 946699 NP_416671.1 CDS psuK NC_000913.3 2258355 2259296 R putative kinase; pseudouridine kinase complement(2258355..2259296) Escherichia coli str. K-12 substr. MG1655 946664 NP_416672.1 CDS fruA NC_000913.3 2259719 2261410 R PTS system, fructose-specific transport protein; fused fructose-specific PTS enzymes: IIBcomponent/IIC components complement(2259719..2261410) Escherichia coli str. K-12 substr. MG1655 946672 NP_416673.1 CDS fruK NC_000913.3 2261427 2262365 R fructose-1-phosphate kinase complement(2261427..2262365) Escherichia coli str. K-12 substr. MG1655 946676 NP_416674.1 CDS fruB NC_000913.3 2262365 2263495 R PTS system, fructose-specific IIA/fpr component; fused fructose-specific PTS enzymes: IIA component/HPr component complement(2262365..2263495) Escherichia coli str. K-12 substr. MG1655 946677 NP_416675.1 CDS setB NC_000913.3 2263863 2265044 D lactose/glucose efflux system 2263863..2265044 Escherichia coli str. K-12 substr. MG1655 946673 YP_588461.1 CDS yeiW NC_000913.3 2265041 2265295 R UPF0153 cysteine cluster protein complement(2265041..2265295) Escherichia coli str. K-12 substr. MG1655 4056031 NP_416676.4 CDS yeiP NC_000913.3 2265450 2266022 D putative elongation factor; elongation factor P-like protein 2265450..2266022 Escherichia coli str. K-12 substr. MG1655 946674 NP_416677.1 CDS yeiQ NC_000913.3 2266245 2267711 D putative oxidoreductase; putative NAD-dependent D-mannonate oxidoreductase 2266245..2267711 Escherichia coli str. K-12 substr. MG1655 946688 NP_416678.1 CDS yeiR NC_000913.3 2267829 2268815 D Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein 2267829..2268815 Escherichia coli str. K-12 substr. MG1655 946701 NP_416679.4 CDS lpxT NC_000913.3 2268854 2269567 D lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase 2268854..2269567 Escherichia coli str. K-12 substr. MG1655 946693 NP_416680.1 CDS mepS NC_000913.3 2269979 2270545 D putative lipoprotein; murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein 2269979..2270545 Escherichia coli str. K-12 substr. MG1655 946686 NP_416681.1 CDS rtn NC_000913.3 2270726 2272282 D resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase 2270726..2272282 Escherichia coli str. K-12 substr. MG1655 946695 NP_416682.4 CDS yejA NC_000913.3 2272364 2274178 D periplasmic-binding component of ABC superfamily; microcin C transporter YejABEF, periplasmic binding protein; ABC family 2272364..2274178 Escherichia coli str. K-12 substr. MG1655 946675 NP_416683.1 CDS yejB NC_000913.3 2274179 2275273 D putative transport system permease protein; membrane component of ABC superfamily; microcin C transporter YejABEF, permease subunit; ABC family 2274179..2275273 Escherichia coli str. K-12 substr. MG1655 946679 NP_416684.1 CDS yejE NC_000913.3 2275273 2276298 D putative transport system permease protein; membrane component of ABC superfamily; microcin C transporter YejABEF, permease subunit; ABC family 2275273..2276298 Escherichia coli str. K-12 substr. MG1655 946683 NP_416685.1 CDS yejF NC_000913.3 2276300 2277889 D putative ATP-binding component of a transport system; microcin C transporter, ATP-binding subunit; ABC family 2276300..2277889 Escherichia coli str. K-12 substr. MG1655 946689 NP_416686.1 CDS yejG NC_000913.3 2277893 2278237 R uncharacterized protein complement(2277893..2278237) Escherichia coli str. K-12 substr. MG1655 945319 NP_416687.1 CDS bcr NC_000913.3 2278570 2279760 R bicyclomycin resistance protein; transmembrane protein; bicyclomycin/cysteine/sulfonamide efflux transporter complement(2278570..2279760) Escherichia coli str. K-12 substr. MG1655 944808 NP_416688.1 CDS rsuA NC_000913.3 2279788 2280483 R 16S pseudouridylate 516 synthase; 16S rRNA pseudouridine(516) synthase complement(2279788..2280483) Escherichia coli str. K-12 substr. MG1655 945378 NP_416689.1 CDS yejH NC_000913.3 2280632 2282392 D putative ATP-dependent helicase; putative ATP-dependent DNA or RNA helicase 2280632..2282392 Escherichia coli str. K-12 substr. MG1655 945529 NP_416690.1 CDS rplY NC_000913.3 2282517 2282801 D 50S ribosomal subunit protein L25 2282517..2282801 Escherichia coli str. K-12 substr. MG1655 945618 NP_416691.1 CDS yejK NC_000913.3 2282940 2283947 R protein present in spermidine nucleoids; spermidine nucleoid-associated protein complement(2282940..2283947) Escherichia coli str. K-12 substr. MG1655 946690 NP_416692.1 CDS yejL NC_000913.3 2284129 2284356 D UPF0352 family protein 2284129..2284356 Escherichia coli str. K-12 substr. MG1655 946694 NP_416693.1 CDS yejM NC_000913.3 2284376 2286136 D putative sulfatase; essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor 2284376..2286136 Escherichia coli str. K-12 substr. MG1655 946685 b2190 CDS yejO NC_000913.3 2286390 2290180 R pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP-binding component of a transport system; complement(join(2286390..2288914,2290114..2290180)) Escherichia coli str. K-12 substr. MG1655 946867 NP_416696.1 CDS insH1 NC_000913.3 2289065 2290081 R IS5 transposase and trans-activator complement(2289065..2290081) Escherichia coli str. K-12 substr. MG1655 949121 NP_416697.1 CDS narP NC_000913.3 2290500 2291147 D nitrate/nitrite response regulator (sensor NarQ); response regulator in two-component regulatory system with NarQ or NarX 2290500..2291147 Escherichia coli str. K-12 substr. MG1655 949081 NP_416698.1 CDS ccmH NC_000913.3 2291358 2292410 R possible subunit of heme lyase; heme lyase, CcmH subunit complement(2291358..2292410) Escherichia coli str. K-12 substr. MG1655 946623 NP_416699.1 CDS dsbE NC_000913.3 2292407 2292964 R periplasmic thioredoxin of cytochrome c-type biogenesis complement(2292407..2292964) Escherichia coli str. K-12 substr. MG1655 949073 NP_416700.1 CDS ccmF NC_000913.3 2292961 2294904 R cytochrome c-type biogenesis protein; heme lyase, CcmF subunit complement(2292961..2294904) Escherichia coli str. K-12 substr. MG1655 948783 NP_416701.1 CDS ccmE NC_000913.3 2294901 2295380 R cytochrome c biogenesis, possible subunit of a heme lyase; periplasmic heme chaperone complement(2294901..2295380) Escherichia coli str. K-12 substr. MG1655 946697 NP_416702.1 CDS ccmD NC_000913.3 2295377 2295586 R heme exporter protein C; cytochrome c biogenesis protein complement(2295377..2295586) Escherichia coli str. K-12 substr. MG1655 946709 NP_416703.1 CDS ccmC NC_000913.3 2295583 2296320 R heme exporter protein C; membrane component of ABC superfamily; heme exporter subunit complement(2295583..2296320) Escherichia coli str. K-12 substr. MG1655 946703 NP_416704.1 CDS ccmB NC_000913.3 2296362 2297024 R heme exporter protein B, cytochrome c-type biogenesis protein; membrane component of ABC superfamily; heme exporter subunit complement(2296362..2297024) Escherichia coli str. K-12 substr. MG1655 946692 NP_416705.2 CDS ccmA NC_000913.3 2297021 2297644 R ATP binding protein of heme exporter A; ATP-binding component of ABC superfamily; heme exporter subunit complement(2297021..2297644) Escherichia coli str. K-12 substr. MG1655 946714 NP_416706.1 CDS napC NC_000913.3 2297657 2298259 R cytochrome c-type protein; quinol dehydrogenase, electron source for NapAB complement(2297657..2298259) Escherichia coli str. K-12 substr. MG1655 946706 NP_416707.4 CDS napB NC_000913.3 2298269 2298718 R cytochrome c-type protein; nitrate reductase, small, cytochrome C550 subunit, periplasmic complement(2298269..2298718) Escherichia coli str. K-12 substr. MG1655 946698 NP_416708.1 CDS napH NC_000913.3 2298715 2299578 R ferredoxin-type protein: electron transfer; ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) complement(2298715..2299578) Escherichia coli str. K-12 substr. MG1655 945984 NP_416709.1 CDS napG NC_000913.3 2299565 2300260 R ferredoxin-type protein: electron transfer; ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) complement(2299565..2300260) Escherichia coli str. K-12 substr. MG1655 945544 NP_416710.1 CDS napA NC_000913.3 2300267 2302753 R probable nitrate reductase 3; nitrate reductase, periplasmic, large subunit complement(2300267..2302753) Escherichia coli str. K-12 substr. MG1655 947093 NP_416711.1 CDS napD NC_000913.3 2302750 2303013 R assembly protein for periplasmic nitrate reductase complement(2302750..2303013) Escherichia coli str. K-12 substr. MG1655 945187 NP_416712.1 CDS napF NC_000913.3 2303003 2303497 R ferredoxin-type protein: electron transfer; ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA complement(2303003..2303497) Escherichia coli str. K-12 substr. MG1655 946813 NP_416713.1 CDS eco NC_000913.3 2303905 2304393 D ecotin, a serine protease inhibitor 2303905..2304393 Escherichia coli str. K-12 substr. MG1655 946700 NP_416714.1 CDS mqo NC_000913.3 2305108 2306754 R malate dehydrogenase, FAD/NAD(P)-binding domain complement(2305108..2306754) Escherichia coli str. K-12 substr. MG1655 946702 NP_416715.1 CDS yojI NC_000913.3 2306972 2308615 R putative ATP-binding component of a transport system; microcin J25 efflux pump, TolC-dependent; fused ABC transporter permease and ATP-binding components complement(2306972..2308615) Escherichia coli str. K-12 substr. MG1655 946705 NP_416716.1 CDS alkB NC_000913.3 2308691 2309341 R DNA repair system specific for alkylated DNA; oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions complement(2308691..2309341) Escherichia coli str. K-12 substr. MG1655 946708 NP_416717.1 CDS ada NC_000913.3 2309341 2310405 R O6-methylguanine-DNA methyltransferase; transcription activator/repressor; fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase complement(2309341..2310405) Escherichia coli str. K-12 substr. MG1655 946710 NP_416718.1 CDS apbE NC_000913.3 2310479 2311534 R putative thiamine-synthetic flavin transferase lipoprotein complement(2310479..2311534) Escherichia coli str. K-12 substr. MG1655 946711 NP_416719.1 CDS ompC NC_000913.3 2311646 2312749 R outer membrane protein 1b (Ib;c); outer membrane porin protein C complement(2311646..2312749) Escherichia coli str. K-12 substr. MG1655 946716 NP_416720.1 CDS rcsD NC_000913.3 2313488 2316160 D putative 2-component sensor protein; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2313488..2316160 Escherichia coli str. K-12 substr. MG1655 946717 NP_416721.1 CDS rcsB NC_000913.3 2316177 2316827 D positive response regulator for colanic capsule biosynthesis, (sensor, RcsC); response regulator in two-component regulatory system with RcsC and YojN 2316177..2316827 Escherichia coli str. K-12 substr. MG1655 947441 NP_416722.2 CDS rcsC NC_000913.3 2317027 2319876 R sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; hybrid sensory kinase in two-component regulatory system with RcsB and YojN complement(2317027..2319876) Escherichia coli str. K-12 substr. MG1655 948993 NP_416723.1 CDS atoS NC_000913.3 2320043 2321869 D sensor protein AtoS for response regulator AtoC; sensory histidine kinase in two-component regulatory system with AtoC 2320043..2321869 Escherichia coli str. K-12 substr. MG1655 949011 NP_416724.1 CDS atoC NC_000913.3 2321866 2323251 D response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS); fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein 2321866..2323251 Escherichia coli str. K-12 substr. MG1655 947444 NP_416725.1 CDS atoD NC_000913.3 2323447 2324109 D acetyl-CoA:acetoacetyl-CoA transferase alpha subunit; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 2323447..2324109 Escherichia coli str. K-12 substr. MG1655 947525 NP_416726.1 CDS atoA NC_000913.3 2324109 2324759 D acetyl-CoA:acetoacetyl-CoA transferase beta subunit; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit 2324109..2324759 Escherichia coli str. K-12 substr. MG1655 946719 NP_416727.1 CDS atoE NC_000913.3 2324756 2326078 D short chain fatty acid transporter 2324756..2326078 Escherichia coli str. K-12 substr. MG1655 946721 NP_416728.1 CDS atoB NC_000913.3 2326109 2327293 D acetyl-CoA acetyltransferase 2326109..2327293 Escherichia coli str. K-12 substr. MG1655 946727 NP_416729.1 CDS yfaP NC_000913.3 2327367 2328143 R DUF2135 family protein, putative host defense protein complement(2327367..2328143) Escherichia coli str. K-12 substr. MG1655 946728 NP_416730.1 CDS yfaQ NC_000913.3 2328148 2329797 R tandem DUF2300 domain protein, putative host defense protein complement(2328148..2329797) Escherichia coli str. K-12 substr. MG1655 946730 b4500 CDS yfaS NC_000913.3 2329798 2334402 R pseudogene, bacterial alpha2-macroglobulin YfaS variant family; putative membrane protein; complement(2329798..2334402) Escherichia coli str. K-12 substr. MG1655 1450231 NP_416732.4 CDS yfaT NC_000913.3 2334336 2334959 R DUF1175 family protein, putative host defense protein complement(2334336..2334959) Escherichia coli str. K-12 substr. MG1655 946622 NP_416733.4 CDS yfaA NC_000913.3 2334956 2336644 R DUF2138 family protein, putative host defense protein complement(2334956..2336644) Escherichia coli str. K-12 substr. MG1655 946618 NP_416734.1 CDS gyrA NC_000913.3 2336793 2339420 R DNA gyrase, subunit A, type II topoisomerase; DNA gyrase (type II topoisomerase), subunit A complement(2336793..2339420) Escherichia coli str. K-12 substr. MG1655 946614 NP_416735.1 CDS ubiG NC_000913.3 2339567 2340289 D 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase 2339567..2340289 Escherichia coli str. K-12 substr. MG1655 946607 NP_416736.1 CDS yfaL NC_000913.3 2340417 2344169 R putative ATP-binding component of a transport system; adhesin complement(2340417..2344169) Escherichia coli str. K-12 substr. MG1655 946595 NP_416737.1 CDS nrdA NC_000913.3 2344865 2347150 D ribonucleoside diphosphate reductase 1, alpha subunit, B1; ribonucleoside-diphosphate reductase 1, alpha subunit 2344865..2347150 Escherichia coli str. K-12 substr. MG1655 946612 NP_416738.1 CDS nrdB NC_000913.3 2347384 2348514 D ribonucleoside-diphosphate reductase 1, beta subunit, B2; ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein 2347384..2348514 Escherichia coli str. K-12 substr. MG1655 946732 NP_416739.1 CDS yfaE NC_000913.3 2348514 2348768 D ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance 2348514..2348768 Escherichia coli str. K-12 substr. MG1655 946729 NP_416740.1 CDS inaA NC_000913.3 2348822 2349472 R pH-inducible protein involved in stress response; acid-inducible Kdo/WaaP family putative kinase complement(2348822..2349472) Escherichia coli str. K-12 substr. MG1655 946731 b2238 CDS yfaH NC_000913.3 2349651 2349893 D pseudogene; 2349651..2349893 Escherichia coli str. K-12 substr. MG1655 946718 NP_416742.1 CDS glpQ NC_000913.3 2349935 2351011 R glycerophosphodiester phosphodiesterase, periplasmic; periplasmic glycerophosphodiester phosphodiesterase complement(2349935..2351011) Escherichia coli str. K-12 substr. MG1655 946725 NP_416743.1 CDS glpT NC_000913.3 2351016 2352374 R sn-glycerol-3-phosphate permease; sn-glycerol-3-phosphate transporter complement(2351016..2352374) Escherichia coli str. K-12 substr. MG1655 946704 NP_416744.1 CDS glpA NC_000913.3 2352647 2354275 D sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit; sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding 2352647..2354275 Escherichia coli str. K-12 substr. MG1655 946713 NP_416745.1 CDS glpB NC_000913.3 2354265 2355524 D sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit 2354265..2355524 Escherichia coli str. K-12 substr. MG1655 946733 NP_416746.1 CDS glpC NC_000913.3 2355521 2356711 D sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit; anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster 2355521..2356711 Escherichia coli str. K-12 substr. MG1655 946735 NP_416747.1 CDS yfaD NC_000913.3 2356904 2357803 D transposase_31 family protein 2356904..2357803 Escherichia coli str. K-12 substr. MG1655 946737 YP_001165324.1 CDS ypaA NC_000913.3 2357816 2358001 D uncharacterized protein 2357816..2358001 Escherichia coli str. K-12 substr. MG1655 1450280 NP_416748.1 CDS rhmA NC_000913.3 2358042 2358845 R 2-keto-3-deoxy-L-rhamnonate aldolase complement(2358042..2358845) Escherichia coli str. K-12 substr. MG1655 948054 NP_416749.4 CDS rhmT NC_000913.3 2358863 2360152 R putative transport protein; putative L-rhamnonate transporter complement(2358863..2360152) Escherichia coli str. K-12 substr. MG1655 945796 NP_416750.2 CDS rhmD NC_000913.3 2360209 2361414 R putative racemase; L-rhamnonate dehydratase complement(2360209..2361414) Escherichia coli str. K-12 substr. MG1655 945881 NP_416751.1 CDS rhmR NC_000913.3 2361429 2362211 R putative regulator; putative DNA-binding transcriptional regulator for the rhm operon complement(2361429..2362211) Escherichia coli str. K-12 substr. MG1655 944752 NP_416752.1 CDS yfaY NC_000913.3 2362431 2363633 R inactive PncC family protein complement(2362431..2363633) Escherichia coli str. K-12 substr. MG1655 945478 NP_416753.4 CDS yfaZ NC_000913.3 2363733 2364275 R outer membrane protein, putative porin complement(2363733..2364275) Escherichia coli str. K-12 substr. MG1655 946739 NP_416754.1 CDS nudI NC_000913.3 2364554 2364979 D nucleoside triphosphatase 2364554..2364979 Escherichia coli str. K-12 substr. MG1655 946740 NP_416755.1 CDS ais NC_000913.3 2365018 2365620 R protein induced by aluminum; putative LPS core heptose(II)-phosphate phosphatase complement(2365018..2365620) Escherichia coli str. K-12 substr. MG1655 944945 NP_416756.5 CDS arnB NC_000913.3 2365928 2367067 D putative enzyme; uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 2365928..2367067 Escherichia coli str. K-12 substr. MG1655 947375 NP_416757.1 CDS arnC NC_000913.3 2367071 2368039 D putative sugar transferase; undecaprenyl phosphate-L-Ara4FN transferase 2367071..2368039 Escherichia coli str. K-12 substr. MG1655 945275 NP_416758.1 CDS arnA NC_000913.3 2368039 2370021 D putative transformylase; fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase 2368039..2370021 Escherichia coli str. K-12 substr. MG1655 947683 NP_416759.1 CDS arnD NC_000913.3 2370018 2370908 D undecaprenyl phosphate-alpha-L-ara4FN deformylase 2370018..2370908 Escherichia coli str. K-12 substr. MG1655 945334 NP_416760.1 CDS arnT NC_000913.3 2370908 2372560 D 4-amino-4-deoxy-L-arabinose transferase (lipid A modification); 4-amino-4-deoxy-L-arabinose transferase 2370908..2372560 Escherichia coli str. K-12 substr. MG1655 947297 YP_588462.1 CDS arnE NC_000913.3 2372557 2372892 D undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit 2372557..2372892 Escherichia coli str. K-12 substr. MG1655 1450282 NP_416761.4 CDS arnF NC_000913.3 2372892 2373278 D putative transport/receptor protein; undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit 2372892..2373278 Escherichia coli str. K-12 substr. MG1655 945344 NP_416762.2 CDS pmrD NC_000913.3 2373272 2373538 R an active Salmonella PmrD ortholog blocks dephosphorylation of PmrA(BasR) by PmrB(BasS); inactive two-component system connector protein complement(2373272..2373538) Escherichia coli str. K-12 substr. MG1655 945130 NP_416763.1 CDS menE NC_000913.3 2373648 2375003 R O-succinylbenzoate-CoA ligase complement(2373648..2375003) Escherichia coli str. K-12 substr. MG1655 946741 NP_416764.1 CDS menC NC_000913.3 2375000 2375962 R o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA; O-succinylbenzoyl-CoA synthase complement(2375000..2375962) Escherichia coli str. K-12 substr. MG1655 946734 NP_416765.1 CDS menB NC_000913.3 2375962 2376819 R dihydroxynaphtoic acid synthetase; dihydroxynaphthoic acid synthetase complement(2375962..2376819) Escherichia coli str. K-12 substr. MG1655 946747 NP_416766.1 CDS menH NC_000913.3 2376834 2377592 R putative enzyme; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase complement(2376834..2377592) Escherichia coli str. K-12 substr. MG1655 946736 NP_416767.1 CDS menD NC_000913.3 2377589 2379259 R 2-oxoglutarate decarboxylase; SHCHC synthase; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase complement(2377589..2379259) Escherichia coli str. K-12 substr. MG1655 946720 NP_416768.4 CDS menF NC_000913.3 2379348 2380643 R isochorismate hydroxymutase 2, menaquinone biosynthesis; isochorismate synthase 2 complement(2379348..2380643) Escherichia coli str. K-12 substr. MG1655 946712 NP_416769.1 CDS elaB NC_000913.3 2380722 2381027 R DUF883 family protein, putative membrane-anchored ribosome-binding protein complement(2380722..2381027) Escherichia coli str. K-12 substr. MG1655 946751 NP_416770.1 CDS elaA NC_000913.3 2381082 2381543 R putative acyl-CoA transferase complement(2381082..2381543) Escherichia coli str. K-12 substr. MG1655 946750 NP_416771.4 CDS rbn NC_000913.3 2381608 2382525 D RNase BN, tRNA processing enzyme 2381608..2382525 Escherichia coli str. K-12 substr. MG1655 946760 NP_416772.1 CDS elaD NC_000913.3 2382713 2383924 D putative sulfatase / phosphatase; protease, capable of cleaving an AMC-ubiquitin model substrate 2382713..2383924 Escherichia coli str. K-12 substr. MG1655 946742 NP_416773.1 CDS yfbK NC_000913.3 2383995 2385722 R Von Willebrand factor domain putative lipoprotein complement(2383995..2385722) Escherichia coli str. K-12 substr. MG1655 946743 NP_416774.2 CDS yfbL NC_000913.3 2385860 2386831 D putative aminopeptidase; putative peptidase 2385860..2386831 Escherichia coli str. K-12 substr. MG1655 945832 NP_416775.1 CDS yfbM NC_000913.3 2386934 2387437 D DUF1877 family protein 2386934..2387437 Escherichia coli str. K-12 substr. MG1655 946745 NP_416776.1 CDS yfbN NC_000913.3 2387710 2388426 R uncharacterized protein complement(2387710..2388426) Escherichia coli str. K-12 substr. MG1655 946748 NP_416777.2 CDS yfbO NC_000913.3 2388635 2389057 D uncharacterized protein 2388635..2389057 Escherichia coli str. K-12 substr. MG1655 946752 NP_416778.2 CDS yfbP NC_000913.3 2389116 2389964 D TPR-like repeats-containing protein 2389116..2389964 Escherichia coli str. K-12 substr. MG1655 946754 NP_416779.2 CDS nuoN NC_000913.3 2390048 2391505 R NADH dehydrogenase I chain N; NADH:ubiquinone oxidoreductase, membrane subunit N complement(2390048..2391505) Escherichia coli str. K-12 substr. MG1655 945136 NP_416780.1 CDS nuoM NC_000913.3 2391512 2393041 R NADH dehydrogenase I chain M; NADH:ubiquinone oxidoreductase, membrane subunit M complement(2391512..2393041) Escherichia coli str. K-12 substr. MG1655 947731 NP_416781.1 CDS nuoL NC_000913.3 2393205 2395046 R NADH dehydrogenase I chain L; NADH:ubiquinone oxidoreductase, membrane subunit L complement(2393205..2395046) Escherichia coli str. K-12 substr. MG1655 945540 NP_416782.1 CDS nuoK NC_000913.3 2395043 2395345 R NADH dehydrogenase I chain K; NADH:ubiquinone oxidoreductase, membrane subunit K complement(2395043..2395345) Escherichia coli str. K-12 substr. MG1655 947580 NP_416783.1 CDS nuoJ NC_000913.3 2395342 2395896 R NADH dehydrogenase I chain J; NADH:ubiquinone oxidoreductase, membrane subunit J complement(2395342..2395896) Escherichia coli str. K-12 substr. MG1655 946756 NP_416784.1 CDS nuoI NC_000913.3 2395908 2396450 R NADH dehydrogenase I chain I; NADH:ubiquinone oxidoreductase, chain I complement(2395908..2396450) Escherichia coli str. K-12 substr. MG1655 946757 NP_416785.1 CDS nuoH NC_000913.3 2396465 2397442 R NADH dehydrogenase I chain H; NADH:ubiquinone oxidoreductase, membrane subunit H complement(2396465..2397442) Escherichia coli str. K-12 substr. MG1655 946761 NP_416786.4 CDS nuoG NC_000913.3 2397439 2400165 R NADH dehydrogenase I chain G; NADH:ubiquinone oxidoreductase, chain G complement(2397439..2400165) Escherichia coli str. K-12 substr. MG1655 946762 NP_416787.1 CDS nuoF NC_000913.3 2400218 2401555 R NADH dehydrogenase I chain F; NADH:ubiquinone oxidoreductase, chain F complement(2400218..2401555) Escherichia coli str. K-12 substr. MG1655 946753 NP_416788.1 CDS nuoE NC_000913.3 2401552 2402052 R NADH dehydrogenase I chain E; NADH:ubiquinone oxidoreductase, chain E complement(2401552..2402052) Escherichia coli str. K-12 substr. MG1655 946746 NP_416789.2 CDS nuoC NC_000913.3 2402055 2403845 R NADH dehydrogenase I chain C, D; NADH:ubiquinone oxidoreductase, fused CD subunit complement(2402055..2403845) Escherichia coli str. K-12 substr. MG1655 946759 NP_416790.1 CDS nuoB NC_000913.3 2403951 2404613 R NADH dehydrogenase I chain B; NADH:ubiquinone oxidoreductase, chain B complement(2403951..2404613) Escherichia coli str. K-12 substr. MG1655 946738 NP_416791.3 CDS nuoA NC_000913.3 2404629 2405072 R NADH dehydrogenase I chain A; NADH:ubiquinone oxidoreductase, membrane subunit A complement(2404629..2405072) Escherichia coli str. K-12 substr. MG1655 946764 NP_416792.1 CDS lrhA NC_000913.3 2405703 2406641 R transcriptional repressor of flagellar, motility and chemotaxis genes complement(2405703..2406641) Escherichia coli str. K-12 substr. MG1655 946769 NP_416793.1 CDS alaA NC_000913.3 2407561 2408778 D putative aminotransferase; valine-pyruvate aminotransferase 2 2407561..2408778 Escherichia coli str. K-12 substr. MG1655 946772 NP_416794.1 CDS yfbR NC_000913.3 2408862 2409461 D putative alpha helix protein; 5'-nucleotidase 2408862..2409461 Escherichia coli str. K-12 substr. MG1655 946771 NP_416795.1 CDS yfbS NC_000913.3 2409520 2411352 R putative transport protein; putative transporter complement(2409520..2411352) Escherichia coli str. K-12 substr. MG1655 946766 NP_416796.2 CDS yfbT NC_000913.3 2411439 2412089 R putative phosphatase; sugar phosphatas complement(2411439..2412089) Escherichia coli str. K-12 substr. MG1655 946777 NP_416797.2 CDS yfbU NC_000913.3 2412100 2412594 R UPF0304 family protein complement(2412100..2412594) Escherichia coli str. K-12 substr. MG1655 946767 NP_416798.1 CDS yfbV NC_000913.3 2412677 2413132 R UPF0208 family inner membrane protein complement(2412677..2413132) Escherichia coli str. K-12 substr. MG1655 946774 NP_416799.1 CDS ackA NC_000913.3 2413470 2414672 D acetate kinase; acetate kinase A and propionate kinase 2 2413470..2414672 Escherichia coli str. K-12 substr. MG1655 946775 NP_416800.1 CDS pta NC_000913.3 2414747 2416891 D phosphotransacetylase; phosphate acetyltransferase 2414747..2416891 Escherichia coli str. K-12 substr. MG1655 946778 NP_416801.2 CDS yfcC NC_000913.3 2417081 2418601 D putative S-transferase; putative inner membrane transporter, C4-dicarboxylate anaerobic carrier family 2417081..2418601 Escherichia coli str. K-12 substr. MG1655 946780 NP_416802.1 CDS yfcD NC_000913.3 2418634 2419176 R putative regulator; putative NUDIX hydrolase complement(2418634..2419176) Escherichia coli str. K-12 substr. MG1655 946783 NP_416803.3 CDS yfcE NC_000913.3 2419234 2419788 R phosphodiesterase activity on bis-pNPP complement(2419234..2419788) Escherichia coli str. K-12 substr. MG1655 946755 NP_416804.1 CDS yfcF NC_000913.3 2419841 2420485 R glutathione S-transferase complement(2419841..2420485) Escherichia coli str. K-12 substr. MG1655 946749 NP_416805.1 CDS yfcG NC_000913.3 2420621 2421268 D putative S-transferase; GSH-dependent disulfide bond oxidoreductase 2420621..2421268 Escherichia coli str. K-12 substr. MG1655 946763 NP_416806.1 CDS folX NC_000913.3 2421325 2421687 D D-erythro-7,8-dihydroneopterin tri P epimerase; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase 2421325..2421687 Escherichia coli str. K-12 substr. MG1655 946781 NP_416807.1 CDS yfcH NC_000913.3 2421708 2422601 D putative sugar nucleotide epimerase; putative NAD-dependent nucleotide-sugar epimerase 2421708..2422601 Escherichia coli str. K-12 substr. MG1655 946784 NP_416808.1 CDS yfcI NC_000913.3 2422649 2423539 R transposase_31 family protein complement(2422649..2423539) Escherichia coli str. K-12 substr. MG1655 946787 NP_416809.1 CDS hisP NC_000913.3 2423736 2424509 R ATP-binding component of histidine transport; histidine/lysine/arginine/ornithine transporter subunit complement(2423736..2424509) Escherichia coli str. K-12 substr. MG1655 946789 NP_416810.1 CDS hisM NC_000913.3 2424517 2425233 R histidine transport, membrane protein M; membrane component of ABC superfamily; histidine/lysine/arginine/ornithine transporter subunit complement(2424517..2425233) Escherichia coli str. K-12 substr. MG1655 946790 NP_416811.1 CDS hisQ NC_000913.3 2425230 2425916 R histidine transport system permease protein; membrane component of ABC superfamily; histidine/lysine/arginine/ornithine transporter permease subunit complement(2425230..2425916) Escherichia coli str. K-12 substr. MG1655 947235 NP_416812.1 CDS hisJ NC_000913.3 2426006 2426788 R histidine-binding periplasmic protein of high-affinity histidine transport system; periplasmic-binding component of ABC superfamily; histidine/lysine/arginine/ornithine transporter subunit complement(2426006..2426788) Escherichia coli str. K-12 substr. MG1655 945309 NP_416813.1 CDS argT NC_000913.3 2427009 2427791 R lysine-, arginine-, ornithine-binding periplasmic protein; periplasmic-binding component of ABC superfamily; lysine/arginine/ornithine transporter subunit complement(2427009..2427791) Escherichia coli str. K-12 substr. MG1655 949030 NP_416814.1 CDS ubiX NC_000913.3 2428057 2428626 R 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(2428057..2428626) Escherichia coli str. K-12 substr. MG1655 949033 NP_416815.1 CDS purF NC_000913.3 2428721 2430238 R amidophosphoribosyltransferase = PRPP amidotransferase; amidophosphoribosyltransferase complement(2428721..2430238) Escherichia coli str. K-12 substr. MG1655 946794 NP_416816.1 CDS cvpA NC_000913.3 2430275 2430763 R colicin V production membrane protein complement(2430275..2430763) Escherichia coli str. K-12 substr. MG1655 945055 NP_416817.2 CDS dedD NC_000913.3 2431022 2431684 R putative lipoprotein; membrane-anchored periplasmic protein involved in septation complement(2431022..2431684) Escherichia coli str. K-12 substr. MG1655 944971 NP_416818.1 CDS folC NC_000913.3 2431674 2432942 R dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(2431674..2432942) Escherichia coli str. K-12 substr. MG1655 945451 NP_416819.1 CDS accD NC_000913.3 2433012 2433926 R acetylCoA carboxylase, carboxytransferase component, beta subunit; acetyl-CoA carboxylase, beta (carboxyltransferase) subunit complement(2433012..2433926) Escherichia coli str. K-12 substr. MG1655 946796 NP_416820.1 CDS dedA NC_000913.3 2434082 2434741 R DedA family inner membrane protein complement(2434082..2434741) Escherichia coli str. K-12 substr. MG1655 946798 NP_416821.1 CDS truA NC_000913.3 2434824 2435636 R tRNA pseudouridine(38-40) synthase complement(2434824..2435636) Escherichia coli str. K-12 substr. MG1655 946793 NP_416822.1 CDS usg NC_000913.3 2435636 2436649 R putative PTS system enzyme II A component; putative semialdehyde dehydrogenase complement(2435636..2436649) Escherichia coli str. K-12 substr. MG1655 946797 NP_416823.1 CDS pdxB NC_000913.3 2436715 2437851 R erythronate-4-phosphate dehyrogenase; erythronate-4-phosphate dehydrogenase complement(2436715..2437851) Escherichia coli str. K-12 substr. MG1655 946785 NP_416824.1 CDS flk NC_000913.3 2437950 2438945 D flagellar assembly protein; putative flagella assembly protein 2437950..2438945 Escherichia coli str. K-12 substr. MG1655 946776 NP_416825.1 CDS yfcJ NC_000913.3 2438942 2440120 R putative transport protein; putative arabinose efflux transporter complement(2438942..2440120) Escherichia coli str. K-12 substr. MG1655 946791 NP_416826.1 CDS fabB NC_000913.3 2440385 2441605 R 3-oxoacyl-[acyl-carrier-protein] synthase I complement(2440385..2441605) Escherichia coli str. K-12 substr. MG1655 946799 NP_416827.4 CDS mnmC NC_000913.3 2441764 2443770 D putative peptidase; fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme 2441764..2443770 Escherichia coli str. K-12 substr. MG1655 946800 NP_416828.1 CDS yfcL NC_000913.3 2443891 2444169 R uncharacterized protein complement(2443891..2444169) Escherichia coli str. K-12 substr. MG1655 946804 NP_416829.1 CDS epmC NC_000913.3 2444203 2444751 R putative transporting ATPase; Elongation Factor P Lys34 hydroxylase complement(2444203..2444751) Escherichia coli str. K-12 substr. MG1655 946807 NP_416830.1 CDS yfcA NC_000913.3 2444751 2445560 R putative structural protein; UPF0721 family inner membrane protein complement(2444751..2445560) Escherichia coli str. K-12 substr. MG1655 946808 NP_416831.1 CDS mepA NC_000913.3 2445560 2446384 R murein DD-endopeptidase, penicillin-insensitive; murein DD-endopeptidase complement(2445560..2446384) Escherichia coli str. K-12 substr. MG1655 946812 NP_416832.1 CDS aroC NC_000913.3 2446388 2447473 R chorismate synthase complement(2446388..2447473) Escherichia coli str. K-12 substr. MG1655 946814 NP_416833.4 CDS prmB NC_000913.3 2447508 2448440 R putative adenine-specific methylase; N5-glutamine methyltransferase complement(2447508..2448440) Escherichia coli str. K-12 substr. MG1655 946805 NP_416834.1 CDS smrB NC_000913.3 2448606 2449157 D putative DNA endonuclease 2448606..2449157 Escherichia coli str. K-12 substr. MG1655 944847 NP_416835.2 CDS yfcO NC_000913.3 2449228 2450049 R DUF2544 family putative outer membrane protein complement(2449228..2450049) Escherichia coli str. K-12 substr. MG1655 946620 NP_416836.1 CDS yfcP NC_000913.3 2450051 2450590 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(2450051..2450590) Escherichia coli str. K-12 substr. MG1655 946788 NP_416837.1 CDS yfcQ NC_000913.3 2450587 2451075 R putative fimbrial-like adhesin protein complement(2450587..2451075) Escherichia coli str. K-12 substr. MG1655 946779 NP_416838.1 CDS yfcR NC_000913.3 2451072 2451584 R putative fimbrial protein; putative fimbrial-like adhesin protein complement(2451072..2451584) Escherichia coli str. K-12 substr. MG1655 946818 NP_416839.1 CDS yfcS NC_000913.3 2451584 2452336 R putative chaperone; putative periplasmic pilin chaperone complement(2451584..2452336) Escherichia coli str. K-12 substr. MG1655 946418 b4661 CDS yfcU NC_000913.3 2452356 2455001 R pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein; complement(2452356..2455001) Escherichia coli str. K-12 substr. MG1655 1450268 NP_416841.1 CDS yfcV NC_000913.3 2455083 2455646 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(2455083..2455646) Escherichia coli str. K-12 substr. MG1655 949109 NP_416842.1 CDS sixA NC_000913.3 2456327 2456812 R phosphohistidine phosphatase complement(2456327..2456812) Escherichia coli str. K-12 substr. MG1655 946815 NP_416843.1 CDS fadJ NC_000913.3 2457015 2459159 R putative enzyme; fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase complement(2457015..2459159) Escherichia coli str. K-12 substr. MG1655 949097 NP_416844.1 CDS fadI NC_000913.3 2459159 2460469 R putative acyltransferase; beta-ketoacyl-CoA thiolase, anaerobic, subunit complement(2459159..2460469) Escherichia coli str. K-12 substr. MG1655 948823 NP_416845.2 CDS yfcZ NC_000913.3 2460650 2460934 R UPF0381 family protein complement(2460650..2460934) Escherichia coli str. K-12 substr. MG1655 948817 NP_416846.2 CDS fadL NC_000913.3 2461306 2462646 D long-chain fatty acid transport protein (outer membrane flp protein); long-chain fatty acid outer membrane transporter 2461306..2462646 Escherichia coli str. K-12 substr. MG1655 946820 NP_416847.1 CDS yfdF NC_000913.3 2463012 2464070 D uncharacterized protein 2463012..2464070 Escherichia coli str. K-12 substr. MG1655 946819 NP_416848.1 CDS mlaA NC_000913.3 2464252 2465007 R lipoprotein precursor; ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component complement(2464252..2465007) Escherichia coli str. K-12 substr. MG1655 945582 NP_416849.1 CDS yfdC NC_000913.3 2465301 2466233 D putative transport protein; putative inner membrane protein 2465301..2466233 Escherichia coli str. K-12 substr. MG1655 944801 NP_416850.1 CDS intS NC_000913.3 2466545 2467702 D CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase 2466545..2467702 Escherichia coli str. K-12 substr. MG1655 946821 NP_416851.1 CDS gtrA NC_000913.3 2467855 2468217 D CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) 2467855..2468217 Escherichia coli str. K-12 substr. MG1655 948821 NP_416852.1 CDS gtrB NC_000913.3 2468214 2469134 D CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase 2468214..2469134 Escherichia coli str. K-12 substr. MG1655 949098 NP_416853.1 CDS gtrS NC_000913.3 2469131 2470462 D putative ligase; serotype-specific glucosyl transferase, CPS-53 (KpLE1) prophage 2469131..2470462 Escherichia coli str. K-12 substr. MG1655 946822 b2353 CDS tfaS NC_000913.3 2470815 2471105 D pseudogene, CPS-53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related; 2470815..2471105 Escherichia coli str. K-12 substr. MG1655 946825 NP_416855.1 CDS yfdK NC_000913.3 2471077 2471517 R CPS-53 (KpLE1) prophage; conserved protein complement(2471077..2471517) Escherichia coli str. K-12 substr. MG1655 948822 b2355 CDS yfdL NC_000913.3 2471544 2472122 R pseudogene, CPS-53 (KpLE1) prophage;Phage or Prophage Related; complement(2471544..2472122) Escherichia coli str. K-12 substr. MG1655 949099 b2356 CDS yfdM NC_000913.3 2472118 2472387 R CPS-53 (KpLE1) prophage; putative methyltransferase;Phage or Prophage Related; complement(2472118..2472387) Escherichia coli str. K-12 substr. MG1655 945416 NP_416858.1 CDS yfdN NC_000913.3 2472387 2472881 R CPS-53 (KpLE1) prophage; uncharacterized protein complement(2472387..2472881) Escherichia coli str. K-12 substr. MG1655 946419 b2358 CDS oweS NC_000913.3 2472878 2473585 R pseudogene, CPS-53 (KpLE1) prophage; bacteriophage replication protein O family;Phage or Prophage Related; complement(2472878..2473585) Escherichia coli str. K-12 substr. MG1655 947403 NP_416860.4 CDS yfdP NC_000913.3 2473604 2473966 D CPS-53 (KpLE1) prophage; uncharacterized protein 2473604..2473966 Escherichia coli str. K-12 substr. MG1655 945565 NP_416861.1 CDS yfdQ NC_000913.3 2474032 2474856 D CPS-53 (KpLE1) prophage; uncharacterized protein 2474032..2474856 Escherichia coli str. K-12 substr. MG1655 946827 NP_416862.2 CDS yfdR NC_000913.3 2474984 2475520 D CPS-53 (KpLE1) prophage; conserved protein 2474984..2475520 Escherichia coli str. K-12 substr. MG1655 946834 NP_416863.1 CDS yfdS NC_000913.3 2475511 2475873 D CPS-53 (KpLE1) prophage; uncharacterized protein 2475511..2475873 Escherichia coli str. K-12 substr. MG1655 946426 NP_416864.1 CDS yfdT NC_000913.3 2475873 2476178 D CPS-53 (KpLE1) prophage; uncharacterized protein 2475873..2476178 Escherichia coli str. K-12 substr. MG1655 946836 b4545 CDS ypdJ NC_000913.3 2476181 2476231 D exisonase remnant; 2476181..2476231 Escherichia coli str. K-12 substr. MG1655 1450283 YP_588463.1 CDS torI NC_000913.3 2476310 2476510 D response regulator inhibitor for tor operon 2476310..2476510 Escherichia coli str. K-12 substr. MG1655 1450232 NP_416865.1 CDS dsdC NC_000913.3 2476694 2477629 R D-serine dehydratase (deaminase) transcriptional activator; dsd operon activator; autorepressor complement(2476694..2477629) Escherichia coli str. K-12 substr. MG1655 948828 NP_416866.1 CDS dsdX NC_000913.3 2477847 2479184 D D-serine transporter 2477847..2479184 Escherichia coli str. K-12 substr. MG1655 949103 NP_416867.1 CDS dsdA NC_000913.3 2479202 2480530 D D-serine dehydratase (deaminase); D-serine dehydratase 2479202..2480530 Escherichia coli str. K-12 substr. MG1655 946837 NP_416868.1 CDS emrY NC_000913.3 2480638 2482176 R multidrug resistance protein Y; putative multidrug efflux system complement(2480638..2482176) Escherichia coli str. K-12 substr. MG1655 946835 NP_416869.1 CDS emrK NC_000913.3 2482176 2483339 R multidrug resistance protein K; EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component complement(2482176..2483339) Escherichia coli str. K-12 substr. MG1655 946840 NP_416870.1 CDS evgA NC_000913.3 2483755 2484369 D putative positive transcription regulator (sensor EvgS); response regulator in two-component regulatory system with EvgS 2483755..2484369 Escherichia coli str. K-12 substr. MG1655 946841 NP_416871.1 CDS evgS NC_000913.3 2484374 2487967 D putative sensor for regulator EvgA; hybrid sensory histidine kinase in two-component regulatory system with EvgA 2484374..2487967 Escherichia coli str. K-12 substr. MG1655 946844 NP_416872.4 CDS yfdE NC_000913.3 2488023 2489168 R putative enzyme; acetyl-CoA:oxalate CoA-transferase complement(2488023..2489168) Escherichia coli str. K-12 substr. MG1655 946432 NP_416873.1 CDS yfdV NC_000913.3 2489242 2490186 R putative receptor protein; putative transporter complement(2489242..2490186) Escherichia coli str. K-12 substr. MG1655 949110 NP_416874.1 CDS oxc NC_000913.3 2490256 2491950 R oxalyl CoA decarboxylase, ThDP-dependent complement(2490256..2491950) Escherichia coli str. K-12 substr. MG1655 946845 NP_416875.1 CDS frc NC_000913.3 2492004 2493254 R putative enzyme; formyl-CoA transferase, NAD(P)-binding complement(2492004..2493254) Escherichia coli str. K-12 substr. MG1655 946842 NP_416876.1 CDS yfdX NC_000913.3 2493767 2494402 R uncharacterized protein complement(2493767..2494402) Escherichia coli str. K-12 substr. MG1655 949108 NP_416877.1 CDS ypdI NC_000913.3 2494698 2494973 D putative lipoprotein involved in colanic acid biosynthesis 2494698..2494973 Escherichia coli str. K-12 substr. MG1655 949107 NP_416878.1 CDS yfdY NC_000913.3 2495050 2495292 R DUF2545 family putative inner membrane protein complement(2495050..2495292) Escherichia coli str. K-12 substr. MG1655 948842 NP_416879.4 CDS lpxP NC_000913.3 2495645 2496565 D putative heat shock protein; palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase 2495645..2496565 Escherichia coli str. K-12 substr. MG1655 946847 YP_002791250.1 CDS ypdK NC_000913.3 2496921 2496992 D inner membrane protein 2496921..2496992 Escherichia coli str. K-12 substr. MG1655 7751622 NP_416880.1 CDS alaC NC_000913.3 2497057 2498295 R putative aminotransferase; valine-pyruvate aminotransferase 3 complement(2497057..2498295) Escherichia coli str. K-12 substr. MG1655 946850 NP_416881.1 CDS ypdA NC_000913.3 2498671 2500368 D putative sensor protein; sensor kinase regulating yhjX; pyruvate-responsive YpdAB two-component system 2498671..2500368 Escherichia coli str. K-12 substr. MG1655 946723 NP_416882.1 CDS ypdB NC_000913.3 2500383 2501117 D putative 2-component transcriptional regulator; response regulator activating yhjX; pyruvate-responsive YpdAB two-component system 2500383..2501117 Escherichia coli str. K-12 substr. MG1655 947395 NP_416883.1 CDS ypdC NC_000913.3 2501130 2501987 D putative ARAC-type regulatory protein; putative DNA-binding protein 2501130..2501987 Escherichia coli str. K-12 substr. MG1655 946856 NP_416884.1 CDS fryA NC_000913.3 2501990 2504485 R putative PTS system enzyme IIA component, enzyme I; putative PTS enzyme, Hpr component/enzyme I component/enzyme IIA component complement(2501990..2504485) Escherichia coli str. K-12 substr. MG1655 946852 NP_416885.1 CDS ypdE NC_000913.3 2504510 2505547 R aminopeptidase complement(2504510..2505547) Escherichia coli str. K-12 substr. MG1655 946848 NP_416886.1 CDS ypdF NC_000913.3 2505547 2506632 R putative peptidase; Xaa-Pro aminopeptidase complement(2505547..2506632) Escherichia coli str. K-12 substr. MG1655 946853 NP_416887.1 CDS fryC NC_000913.3 2506647 2507894 R putative enzyme IIC component of PTS complement(2506647..2507894) Escherichia coli str. K-12 substr. MG1655 949111 NP_416888.1 CDS fryB NC_000913.3 2507916 2508242 R putative PTS system enzyme IIB component; putative enzyme IIB component of PTS complement(2507916..2508242) Escherichia coli str. K-12 substr. MG1655 949087 NP_416889.1 CDS glk NC_000913.3 2508461 2509426 R glucokinase complement(2508461..2509426) Escherichia coli str. K-12 substr. MG1655 946858 NP_416890.1 CDS yfeO NC_000913.3 2509630 2510886 D putative ion channel protein 2509630..2510886 Escherichia coli str. K-12 substr. MG1655 946854 NP_416891.1 CDS ypeC NC_000913.3 2511001 2511327 D the overlapping reading frame (b2391) is no longer thought to be an actual gene, and has been deaccessioned; DUF2502 family putative periplasmic protein 2511001..2511327 Escherichia coli str. K-12 substr. MG1655 946855 NP_416893.1 CDS mntH NC_000913.3 2511468 2512706 R manganese/divalent cation transporter complement(2511468..2512706) Escherichia coli str. K-12 substr. MG1655 946899 NP_416894.1 CDS nupC NC_000913.3 2513042 2514244 D permease of transport system for 3 nucleosides; nucleoside (except guanosine) transporter 2513042..2514244 Escherichia coli str. K-12 substr. MG1655 946895 NP_416895.2 CDS insL1 NC_000913.3 2514331 2515443 D IS186 transposase 2514331..2515443 Escherichia coli str. K-12 substr. MG1655 946896 NP_416896.4 CDS yfeA NC_000913.3 2515643 2517832 R putative diguanylate cyclase complement(2515643..2517832) Escherichia coli str. K-12 substr. MG1655 946864 NP_416897.2 CDS yfeC NC_000913.3 2518467 2518811 D DUF1323 family putative DNA-binding protein 2518467..2518811 Escherichia coli str. K-12 substr. MG1655 946857 NP_416898.3 CDS yfeD NC_000913.3 2518813 2519205 D DUF1323 family putative DNA-binding protein 2518813..2519205 Escherichia coli str. K-12 substr. MG1655 946865 NP_416899.1 CDS gltX NC_000913.3 2519257 2520672 R glutamate tRNA synthetase, catalytic subunit; glutamyl-tRNA synthetase complement(2519257..2520672) Escherichia coli str. K-12 substr. MG1655 946906 NP_416900.1 CDS xapR NC_000913.3 2521593 2522477 R regulator for xapA; transcriptional activator of xapAB complement(2521593..2522477) Escherichia coli str. K-12 substr. MG1655 946862 NP_416901.1 CDS xapB NC_000913.3 2522729 2523985 R xanthosine permease; xanthosine transporter complement(2522729..2523985) Escherichia coli str. K-12 substr. MG1655 946868 NP_416902.1 CDS xapA NC_000913.3 2524045 2524878 R xanthosine phosphorylase; purine nucleoside phosphorylase II complement(2524045..2524878) Escherichia coli str. K-12 substr. MG1655 946878 NP_416903.1 CDS yfeN NC_000913.3 2525127 2525891 D putative sugar hydrolase; putative outer membrane protein 2525127..2525891 Escherichia coli str. K-12 substr. MG1655 946872 NP_416904.1 CDS yfeR NC_000913.3 2525930 2526856 R putative transcriptional regulator LYSR-type; transcriptional regulator of yefH complement(2525930..2526856) Escherichia coli str. K-12 substr. MG1655 946873 NP_416905.1 CDS yfeH NC_000913.3 2526946 2527944 D putative cytochrome oxidase; putative inorganic ion transporter 2526946..2527944 Escherichia coli str. K-12 substr. MG1655 946874 YP_588464.1 CDS ypeB NC_000913.3 2527941 2528159 R DUF3820 family protein complement(2527941..2528159) Escherichia coli str. K-12 substr. MG1655 1450285 NP_416906.1 CDS ligA NC_000913.3 2528161 2530176 R DNA ligase; DNA ligase, NAD(+)-dependent complement(2528161..2530176) Escherichia coli str. K-12 substr. MG1655 946885 NP_416907.1 CDS zipA NC_000913.3 2530247 2531233 R cell division protein involved in FtsZ ring; FtsZ stabilizer complement(2530247..2531233) Escherichia coli str. K-12 substr. MG1655 946869 NP_416908.1 CDS cysZ NC_000913.3 2531463 2532224 D required for sulfate transport; EI24 family inner membrane protein; putative sulfate transporter 2531463..2532224 Escherichia coli str. K-12 substr. MG1655 946875 NP_416909.1 CDS cysK NC_000913.3 2532409 2533380 D cysteine synthase A, O-acetylserine sulfhydrolase A; cysteine synthase A, O-acetylserine sulfhydrolase A subunit 2532409..2533380 Escherichia coli str. K-12 substr. MG1655 946877 NP_416910.1 CDS ptsH NC_000913.3 2533764 2534021 D PTS system protein HPr; phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2533764..2534021 Escherichia coli str. K-12 substr. MG1655 946886 NP_416911.1 CDS ptsI NC_000913.3 2534066 2535793 D PEP-protein phosphotransferase system enzyme I; PEP-protein phosphotransferase of PTS system (enzyme I) 2534066..2535793 Escherichia coli str. K-12 substr. MG1655 946879 NP_416912.1 CDS crr NC_000913.3 2535834 2536343 D PTS system, glucose-specific IIA component; glucose-specific enzyme IIA component of PTS 2535834..2536343 Escherichia coli str. K-12 substr. MG1655 946880 NP_416913.1 CDS pdxK NC_000913.3 2536386 2537237 R pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase complement(2536386..2537237) Escherichia coli str. K-12 substr. MG1655 946881 NP_416914.1 CDS yfeK NC_000913.3 2537342 2537716 D uncharacterized protein 2537342..2537716 Escherichia coli str. K-12 substr. MG1655 946876 NP_416915.1 CDS yfeS NC_000913.3 2537749 2538483 D WGR domain protein 2537749..2538483 Escherichia coli str. K-12 substr. MG1655 946887 NP_416916.1 CDS cysM NC_000913.3 2538672 2539583 R cysteine synthase B, O-acetylserine sulfhydrolase B; cysteine synthase B (O-acetylserine sulfhydrolase B) complement(2538672..2539583) Escherichia coli str. K-12 substr. MG1655 946888 NP_416917.1 CDS cysA NC_000913.3 2539717 2540814 R ATP-binding component of sulfate permease A protein; chromate resistance; ATP-binding component of ABC superfamily; sulfate/thiosulfate transporter subunit complement(2539717..2540814) Escherichia coli str. K-12 substr. MG1655 946889 YP_026168.2 CDS cysW NC_000913.3 2540804 2541679 R sulfate transport system permease W protein; membrane component of ABC superfamily; sulfate/thiosulfate ABC transporter subunit complement(2540804..2541679) Escherichia coli str. K-12 substr. MG1655 2847743 NP_416919.1 CDS cysU NC_000913.3 2541679 2542512 R sulfate, thiosulfate transport system permease T protein; membrane component of ABC superfamily; sulfate/thiosulfate ABC transporter permease complement(2541679..2542512) Escherichia coli str. K-12 substr. MG1655 946882 NP_416920.1 CDS cysP NC_000913.3 2542512 2543528 R thiosulfate binding protein; periplasmic-binding component of ABC superfamily; thiosulfate-binding protein complement(2542512..2543528) Escherichia coli str. K-12 substr. MG1655 946883 NP_416921.4 CDS ucpA NC_000913.3 2543832 2544623 R putative oxidoreductase; furfural resistance protein, putative short-chain oxidoreductase complement(2543832..2544623) Escherichia coli str. K-12 substr. MG1655 946898 NP_416922.1 CDS murR NC_000913.3 2544752 2545609 R repressor for murPQ, MurNAc 6-P inducible complement(2544752..2545609) Escherichia coli str. K-12 substr. MG1655 946568 NP_416923.1 CDS murQ NC_000913.3 2545773 2546669 D putative regulator; N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase 2545773..2546669 Escherichia coli str. K-12 substr. MG1655 946893 NP_416924.1 CDS murP NC_000913.3 2546673 2548097 D N-acetylmuramic acid permease, EIIBC component, PTS system 2546673..2548097 Escherichia coli str. K-12 substr. MG1655 946894 NP_416925.2 CDS yfeW NC_000913.3 2548102 2549406 D putative beta-lactamase; penicillin binding protein PBP4B; weak DD-carboxypeptidase activity 2548102..2549406 Escherichia coli str. K-12 substr. MG1655 946907 NP_416926.4 CDS yfeX NC_000913.3 2549646 2550545 R porphyrinogen oxidase, cytoplasmic complement(2549646..2550545) Escherichia coli str. K-12 substr. MG1655 946913 NP_416927.1 CDS yfeY NC_000913.3 2550641 2551216 R RpoE-regulated lipoprotein complement(2550641..2551216) Escherichia coli str. K-12 substr. MG1655 946919 NP_416928.4 CDS yfeZ NC_000913.3 2551277 2551726 R inner membrane protein complement(2551277..2551726) Escherichia coli str. K-12 substr. MG1655 946918 NP_416929.4 CDS ypeA NC_000913.3 2551713 2552138 R putative acyl-CoA transferase complement(2551713..2552138) Escherichia coli str. K-12 substr. MG1655 946917 NP_416930.1 CDS amiA NC_000913.3 2552352 2553221 D N-acetylmuramoyl-l-alanine amidase I 2552352..2553221 Escherichia coli str. K-12 substr. MG1655 946916 NP_416931.1 CDS hemF NC_000913.3 2553225 2554124 D coproporphyrinogen III oxidase 2553225..2554124 Escherichia coli str. K-12 substr. MG1655 946908 NP_416932.1 CDS eutR NC_000913.3 2554130 2555182 R putative ARAC-type regulatory protein; eut operon transcriptional activator, AraC family complement(2554130..2555182) Escherichia coli str. K-12 substr. MG1655 946911 NP_416933.4 CDS eutK NC_000913.3 2555228 2555728 R putative ethanol utilization carboxysome structural protein complement(2555228..2555728) Escherichia coli str. K-12 substr. MG1655 946912 NP_416934.1 CDS eutL NC_000913.3 2555741 2556400 R putative ethanol utilization carboxysome structural protein complement(2555741..2556400) Escherichia coli str. K-12 substr. MG1655 946914 NP_416935.1 CDS eutC NC_000913.3 2556410 2557297 R ethanolamine ammonia-lyase, light chain; ethanolamine ammonia-lyase, small subunit (light chain) complement(2556410..2557297) Escherichia coli str. K-12 substr. MG1655 946925 NP_416936.4 CDS eutB NC_000913.3 2557318 2558679 R ethanolamine ammonia-lyase, heavy chain; ethanolamine ammonia-lyase, large subunit, heavy chain complement(2557318..2558679) Escherichia coli str. K-12 substr. MG1655 946924 NP_416937.2 CDS intZ NC_000913.3 2558858 2560066 D putative prophage integrase; CPZ-55 prophage; putative phage integrase 2558858..2560066 Escherichia coli str. K-12 substr. MG1655 946923 NP_416938.1 CDS yffL NC_000913.3 2560257 2560898 D CPZ-55 prophage; uncharacterized protein 2560257..2560898 Escherichia coli str. K-12 substr. MG1655 946922 NP_416939.1 CDS yffM NC_000913.3 2561368 2561613 D CPZ-55 prophage; uncharacterized protein 2561368..2561613 Escherichia coli str. K-12 substr. MG1655 946921 NP_416940.2 CDS yffN NC_000913.3 2561625 2561993 D CPZ-55 prophage; uncharacterized protein 2561625..2561993 Escherichia coli str. K-12 substr. MG1655 946930 NP_416941.1 CDS yffO NC_000913.3 2562111 2562527 D CPZ-55 prophage; uncharacterized protein 2562111..2562527 Escherichia coli str. K-12 substr. MG1655 946929 NP_416942.1 CDS yffP NC_000913.3 2562524 2563117 D CPZ-55 prophage; uncharacterized protein 2562524..2563117 Escherichia coli str. K-12 substr. MG1655 946928 NP_416943.2 CDS yffQ NC_000913.3 2563592 2563969 D CPZ-55 prophage; uncharacterized protein 2563592..2563969 Escherichia coli str. K-12 substr. MG1655 946927 NP_416944.1 CDS yffR NC_000913.3 2563980 2564372 D CPZ-55 prophage; uncharacterized protein 2563980..2564372 Escherichia coli str. K-12 substr. MG1655 946931 NP_416945.2 CDS yffS NC_000913.3 2564523 2565332 D CPZ-55 prophage; uncharacterized protein 2564523..2565332 Escherichia coli str. K-12 substr. MG1655 946932 NP_416946.1 CDS eutA NC_000913.3 2565481 2566884 R reactivating factor for ethanolamine ammonia lyase complement(2565481..2566884) Escherichia coli str. K-12 substr. MG1655 946937 NP_416947.1 CDS eutH NC_000913.3 2566881 2568107 R ethanolamine utilization; homolog of Salmonella putative transport protein; ethanolamine transporter complement(2566881..2568107) Escherichia coli str. K-12 substr. MG1655 944979 NP_416948.4 CDS eutG NC_000913.3 2568324 2569511 R ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase; ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase, converts acetaldehyde to ethanol complement(2568324..2569511) Escherichia coli str. K-12 substr. MG1655 946233 NP_416949.1 CDS eutJ NC_000913.3 2569501 2570337 R ethanolamine utilization; homolog of Salmonella gene; ethanolamine utilization protein, HSP70/actin superfamily protein complement(2569501..2570337) Escherichia coli str. K-12 substr. MG1655 947588 NP_416950.1 CDS eutE NC_000913.3 2570348 2571751 R ethanolamine utilization; similar to acetaldehyde dehydrogenase; aldehyde oxidoreductase, ethanolamine utilization protein complement(2570348..2571751) Escherichia coli str. K-12 substr. MG1655 946943 NP_416951.1 CDS eutN NC_000913.3 2571763 2572050 R detox protein; Ethanolamine catabolic microcompartment shell protein complement(2571763..2572050) Escherichia coli str. K-12 substr. MG1655 946945 NP_416952.2 CDS eutM NC_000913.3 2572157 2572450 R detox protein; ethanolamine utilization protein, putative carboxysome structural protein complement(2572157..2572450) Escherichia coli str. K-12 substr. MG1655 946942 NP_416953.1 CDS eutD NC_000913.3 2572489 2573505 R ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase; phosphate acetyltransferase complement(2572489..2573505) Escherichia coli str. K-12 substr. MG1655 946940 NP_416954.1 CDS eutT NC_000913.3 2573502 2574305 R cobalamin adenosyltransferase involved in ethanolamine utilization complement(2573502..2574305) Escherichia coli str. K-12 substr. MG1655 946939 NP_416955.1 CDS eutQ NC_000913.3 2574302 2575003 R RmlC-like cupin domain protein complement(2574302..2575003) Escherichia coli str. K-12 substr. MG1655 946935 NP_416956.1 CDS eutP NC_000913.3 2574978 2575457 R putative P-loop NTPase ethanolamine utilization protein complement(2574978..2575457) Escherichia coli str. K-12 substr. MG1655 946933 NP_416957.4 CDS eutS NC_000913.3 2575470 2575805 R putative ethanol utilization carboxysome structural protein complement(2575470..2575805) Escherichia coli str. K-12 substr. MG1655 946936 NP_416958.1 CDS maeB NC_000913.3 2576098 2578377 R putative multimodular enzyme; malic enzyme: putative oxidoreductase/putative phosphotransacetylase complement(2576098..2578377) Escherichia coli str. K-12 substr. MG1655 946947 NP_416959.1 CDS talA NC_000913.3 2578666 2579616 D transaldolase A 2578666..2579616 Escherichia coli str. K-12 substr. MG1655 947006 NP_416960.1 CDS tktB NC_000913.3 2579636 2581639 D transketolase 2 isozyme; transketolase 2, thiamine triphosphate-binding 2579636..2581639 Escherichia coli str. K-12 substr. MG1655 945865 NP_416961.1 CDS ypfG NC_000913.3 2581734 2582777 R DUF1176 family protein complement(2581734..2582777) Escherichia coli str. K-12 substr. MG1655 946828 NP_416962.1 CDS nudK NC_000913.3 2582903 2583478 R GDP-mannose pyrophosphatase complement(2582903..2583478) Escherichia coli str. K-12 substr. MG1655 947072 NP_416963.1 CDS aegA NC_000913.3 2583546 2585525 R putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit complement(2583546..2585525) Escherichia coli str. K-12 substr. MG1655 947383 NP_416964.1 CDS narQ NC_000913.3 2585731 2587431 D sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL); sensory histidine kinase in two-component regulatory system with NarP (NarL) 2585731..2587431 Escherichia coli str. K-12 substr. MG1655 946948 NP_416965.1 CDS acrD NC_000913.3 2587595 2590708 D aminoglycoside/multidrug efflux system 2587595..2590708 Escherichia coli str. K-12 substr. MG1655 945464 YP_001165325.1 CDS ypfM NC_000913.3 2590807 2590866 R stress-induced small enterobacterial protein complement(2590807..2590866) Escherichia coli str. K-12 substr. MG1655 5061513 NP_416966.1 CDS yffB NC_000913.3 2591247 2591603 D putative ArsC family reductase 2591247..2591603 Escherichia coli str. K-12 substr. MG1655 946953 NP_416967.1 CDS dapE NC_000913.3 2591607 2592734 D N-succinyl-diaminopimelate deacylase 2591607..2592734 Escherichia coli str. K-12 substr. MG1655 948313 YP_588465.1 CDS ypfN NC_000913.3 2592762 2592962 D putative membrane protein, UPF0370 family 2592762..2592962 Escherichia coli str. K-12 substr. MG1655 1450286 NP_416968.2 CDS ypfH NC_000913.3 2593072 2593770 R palmitoyl-CoA esterase activity, uncertain physiological substrate complement(2593072..2593770) Escherichia coli str. K-12 substr. MG1655 947571 NP_416969.1 CDS tmcA NC_000913.3 2593844 2595859 R elongator methionine tRNA (ac4C34) acetyltransferase complement(2593844..2595859) Escherichia coli str. K-12 substr. MG1655 946053 NP_416970.1 CDS ypfJ NC_000913.3 2595874 2596737 R putative neutral zinc metallopeptidase complement(2595874..2596737) Escherichia coli str. K-12 substr. MG1655 946956 NP_416971.1 CDS purC NC_000913.3 2596905 2597618 R phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthetase complement(2596905..2597618) Escherichia coli str. K-12 substr. MG1655 946957 NP_416972.4 CDS bamC NC_000913.3 2597831 2598865 R lipoprotein-34; BamABCDE complex OM biogenesis lipoprotein complement(2597831..2598865) Escherichia coli str. K-12 substr. MG1655 946954 NP_416973.1 CDS dapA NC_000913.3 2598882 2599760 R dihydrodipicolinate synthase complement(2598882..2599760) Escherichia coli str. K-12 substr. MG1655 946952 NP_416974.4 CDS gcvR NC_000913.3 2599906 2600478 D transcriptional regulation of gcv operon; transcriptional repressor, regulatory protein accessory to GcvA 2599906..2600478 Escherichia coli str. K-12 substr. MG1655 946950 NP_416975.1 CDS bcp NC_000913.3 2600478 2600948 D bacterioferritin comigratory protein; peroxiredoxin; thiol peroxidase, thioredoxin-dependent 2600478..2600948 Escherichia coli str. K-12 substr. MG1655 946949 NP_416976.4 CDS hyfA NC_000913.3 2601201 2601818 D hydrogenase 4 Fe-S subunit; hydrogenase 4, 4Fe-4S subunit 2601201..2601818 Escherichia coli str. K-12 substr. MG1655 946959 NP_416977.1 CDS hyfB NC_000913.3 2601818 2603836 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2601818..2603836 Escherichia coli str. K-12 substr. MG1655 946961 NP_416978.4 CDS hyfC NC_000913.3 2603847 2604794 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2603847..2604794 Escherichia coli str. K-12 substr. MG1655 947492 NP_416979.1 CDS hyfD NC_000913.3 2604811 2606250 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2604811..2606250 Escherichia coli str. K-12 substr. MG1655 947290 NP_416980.1 CDS hyfE NC_000913.3 2606262 2606912 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2606262..2606912 Escherichia coli str. K-12 substr. MG1655 945298 NP_416981.1 CDS hyfF NC_000913.3 2606917 2608497 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2606917..2608497 Escherichia coli str. K-12 substr. MG1655 946962 NP_416982.1 CDS hyfG NC_000913.3 2608487 2610154 D hydrogenase 4 subunit; hydrogenase 4, subunit 2608487..2610154 Escherichia coli str. K-12 substr. MG1655 946964 NP_416983.1 CDS hyfH NC_000913.3 2610164 2610709 D hydrogenase 4 Fe-S subunit; hydrogenase 4, Fe-S subunit 2610164..2610709 Escherichia coli str. K-12 substr. MG1655 946965 NP_416984.1 CDS hyfI NC_000913.3 2610706 2611464 D hydrogenase 4 Fe-S subunit; hydrogenase 4, Fe-S subunit 2610706..2611464 Escherichia coli str. K-12 substr. MG1655 946966 NP_416985.4 CDS hyfJ NC_000913.3 2611457 2611870 D putative processing element hydrogenase 4 2611457..2611870 Escherichia coli str. K-12 substr. MG1655 947713 NP_416986.4 CDS hyfR NC_000913.3 2611900 2613912 D putative 2-component regulator, interaction with sigma 54; hydrogenase-4 transcriptional activator 2611900..2613912 Escherichia coli str. K-12 substr. MG1655 948886 NP_416987.1 CDS focB NC_000913.3 2613934 2614782 D probable formate transporter (formate channel 2); putative formate transporter 2613934..2614782 Escherichia coli str. K-12 substr. MG1655 949032 NP_416988.1 CDS yfgO NC_000913.3 2614820 2615881 R putative permease; putative UPF0118 family inner membrane permease complement(2614820..2615881) Escherichia coli str. K-12 substr. MG1655 945894 NP_416989.1 CDS bepA NC_000913.3 2616094 2617557 D periplasmic metalloprotease and chaperone for OM protein maintenance and assembly 2616094..2617557 Escherichia coli str. K-12 substr. MG1655 947029 NP_416990.1 CDS yfgD NC_000913.3 2617578 2617937 D putative oxidoreductase 2617578..2617937 Escherichia coli str. K-12 substr. MG1655 946974 NP_416991.2 CDS hda NC_000913.3 2618075 2618776 R putative DNA replication factor; ATPase regulatory factor involved in DnaA inactivation complement(2618075..2618776) Escherichia coli str. K-12 substr. MG1655 946977 NP_416992.1 CDS uraA NC_000913.3 2618871 2620160 R uracil transport; uracil permease complement(2618871..2620160) Escherichia coli str. K-12 substr. MG1655 946978 NP_416993.2 CDS upp NC_000913.3 2620246 2620872 R uracil phosphoribosyltransferase complement(2620246..2620872) Escherichia coli str. K-12 substr. MG1655 946979 NP_416994.1 CDS purM NC_000913.3 2621197 2622234 D phosphoribosylaminoimidazole synthetase = AIR synthetase; phosphoribosylaminoimidazole synthetase 2621197..2622234 Escherichia coli str. K-12 substr. MG1655 946975 NP_416995.1 CDS purN NC_000913.3 2622234 2622872 D phosphoribosylglycinamide formyltransferase 1 2622234..2622872 Escherichia coli str. K-12 substr. MG1655 946973 NP_416996.1 CDS ppk NC_000913.3 2623044 2625110 D polyphosphate kinase; polyphosphate kinase, component of RNA degradosome 2623044..2625110 Escherichia coli str. K-12 substr. MG1655 946971 NP_416997.1 CDS ppx NC_000913.3 2625115 2626656 D exopolyphosphatase 2625115..2626656 Escherichia coli str. K-12 substr. MG1655 946970 NP_416998.1 CDS yfgF NC_000913.3 2626695 2628938 R putative cytochrome C-type biogenesis protein; cyclic-di-GMP phosphodiesterase, anaerobic complement(2626695..2628938) Escherichia coli str. K-12 substr. MG1655 946968 NP_416999.1 CDS yfgG NC_000913.3 2629290 2629481 D uncharacterized protein 2629290..2629481 Escherichia coli str. K-12 substr. MG1655 946980 NP_417000.1 CDS yfgH NC_000913.3 2629792 2630310 D putative outer membrane lipoprotein; outer membrane integrity lipoprotein 2629792..2630310 Escherichia coli str. K-12 substr. MG1655 945709 NP_417001.1 CDS yfgI NC_000913.3 2630326 2630865 D putative membrane protein; nalidixic acid resistance protein, putative periplasmic protein 2630326..2630865 Escherichia coli str. K-12 substr. MG1655 945168 NP_417002.1 CDS guaA NC_000913.3 2630958 2632535 R GMP synthetase (glutamine-hydrolyzing); GMP synthetase (glutamine aminotransferase) complement(2630958..2632535) Escherichia coli str. K-12 substr. MG1655 947334 NP_417003.1 CDS guaB NC_000913.3 2632604 2634070 R IMP dehydrogenase complement(2632604..2634070) Escherichia coli str. K-12 substr. MG1655 946985 NP_417004.1 CDS xseA NC_000913.3 2634232 2635602 D exonuclease VII, large subunit 2634232..2635602 Escherichia coli str. K-12 substr. MG1655 946988 NP_417005.2 CDS yfgJ NC_000913.3 2635599 2635814 R DUF1407 family protein complement(2635599..2635814) Escherichia coli str. K-12 substr. MG1655 946984 NP_417006.2 CDS der NC_000913.3 2635884 2637356 R putative GTP-binding factor; GTPase; multicopy suppressor of ftsJ complement(2635884..2637356) Escherichia coli str. K-12 substr. MG1655 946983 NP_417007.1 CDS bamB NC_000913.3 2637474 2638652 R putative dehydrogenase; BamABCDE complex OM biogenesis lipoprotein complement(2637474..2638652) Escherichia coli str. K-12 substr. MG1655 946982 NP_417008.1 CDS yfgM NC_000913.3 2638663 2639283 R putative anti-RcsB factor complement(2638663..2639283) Escherichia coli str. K-12 substr. MG1655 946981 NP_417009.1 CDS hisS NC_000913.3 2639301 2640575 R histidine tRNA synthetase; histidyl tRNA synthetase complement(2639301..2640575) Escherichia coli str. K-12 substr. MG1655 946989 NP_417010.1 CDS ispG NC_000913.3 2640686 2641804 R 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase complement(2640686..2641804) Escherichia coli str. K-12 substr. MG1655 946991 NP_417011.1 CDS rodZ NC_000913.3 2641831 2642844 R putative membrane protein; MreB assembly cytoskeletal protein complement(2641831..2642844) Escherichia coli str. K-12 substr. MG1655 946992 NP_417012.1 CDS rlmN NC_000913.3 2643129 2644283 R dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent complement(2643129..2644283) Escherichia coli str. K-12 substr. MG1655 946249 NP_417013.1 CDS ndk NC_000913.3 2644433 2644864 R nucleoside diphosphate kinase; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase complement(2644433..2644864) Escherichia coli str. K-12 substr. MG1655 945611 NP_417014.1 CDS pbpC NC_000913.3 2645013 2647325 R penicillin binding protein 1C (PBP 1C); penicillin-insensitive murein repair transglycosylase; inactive transpeptidase domain complement(2645013..2647325) Escherichia coli str. K-12 substr. MG1655 947152 NP_417015.1 CDS yfhM NC_000913.3 2647326 2652287 R bacterial alpha2-macroglobulin colonization factor ECAM; anti-host protease defense factor; periplasmic inner membrane-anchored lipoprotein complement(2647326..2652287) Escherichia coli str. K-12 substr. MG1655 947302 NP_417016.4 CDS sseA NC_000913.3 2652494 2653339 D putative thiosulfate sulfurtransferase; 3-mercaptopyruvate sulfurtransferase 2652494..2653339 Escherichia coli str. K-12 substr. MG1655 946993 NP_417017.4 CDS sseB NC_000913.3 2654157 2654933 R enhanced serine sensitivity; rhodanase-like enzyme, sulfur transfer from thiosulfate complement(2654157..2654933) Escherichia coli str. K-12 substr. MG1655 946994 NP_417018.4 CDS pepB NC_000913.3 2655075 2656358 R putative peptidase; aminopeptidase B complement(2655075..2656358) Escherichia coli str. K-12 substr. MG1655 948766 NP_417019.1 CDS iscX NC_000913.3 2656536 2656736 R Iron binding protein associated with IscS; putative molecular adaptor of IscS function complement(2656536..2656736) Escherichia coli str. K-12 substr. MG1655 945196 NP_417020.1 CDS fdx NC_000913.3 2656748 2657083 R [2FE-2S] ferredoxin, electron carrer protein; [2Fe-2S] ferredoxin complement(2656748..2657083) Escherichia coli str. K-12 substr. MG1655 947160 NP_417021.1 CDS hscA NC_000913.3 2657085 2658935 R DnaK-homologue chaperone Hsc66; DnaK-like molecular chaperone specific for IscU complement(2657085..2658935) Escherichia coli str. K-12 substr. MG1655 944885 NP_417022.1 CDS hscB NC_000913.3 2658952 2659467 R HscA co-chaperone, J domain-containing protein Hsc56; IscU-specific chaperone HscAB complement(2658952..2659467) Escherichia coli str. K-12 substr. MG1655 946995 NP_417023.1 CDS iscA NC_000913.3 2659563 2659886 R FeS cluster assembly protein complement(2659563..2659886) Escherichia coli str. K-12 substr. MG1655 946999 NP_417024.1 CDS iscU NC_000913.3 2659903 2660289 R iron-sulfur cluster assembly scaffold protein complement(2659903..2660289) Escherichia coli str. K-12 substr. MG1655 947002 YP_026169.1 CDS iscS NC_000913.3 2660317 2661531 R cysteine desulfurase; cysteine desulfurase (tRNA sulfurtransferase) PLP-dependent; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent complement(2660317..2661531) Escherichia coli str. K-12 substr. MG1655 947004 NP_417026.1 CDS iscR NC_000913.3 2661643 2662131 R Fe-S cluster-containing transcription factor; transcriptional repressor of iscRSUA operon; isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor complement(2661643..2662131) Escherichia coli str. K-12 substr. MG1655 945279 NP_417027.1 CDS trmJ NC_000913.3 2662583 2663323 R tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent complement(2662583..2663323) Escherichia coli str. K-12 substr. MG1655 948610 NP_417028.1 CDS suhB NC_000913.3 2663442 2664245 D inositol-1-monophosphatase; inositol monophosphatase 2663442..2664245 Escherichia coli str. K-12 substr. MG1655 947285 NP_417029.4 CDS yfhR NC_000913.3 2664390 2665244 D putative enzyme (3.4.-); putative S9 family prolyl oligopeptidase 2664390..2665244 Escherichia coli str. K-12 substr. MG1655 945059 NP_417030.2 CDS csiE NC_000913.3 2665435 2666715 D stationary phase inducible protein 2665435..2666715 Escherichia coli str. K-12 substr. MG1655 947009 NP_417031.1 CDS hcaT NC_000913.3 2666707 2667846 R MFS (major facilitator superfamily) transporter; putative 3-phenylpropionic transporter complement(2666707..2667846) Escherichia coli str. K-12 substr. MG1655 947007 NP_417032.1 CDS hcaR NC_000913.3 2668006 2668896 R transcriptional activator of hca cluster; completely contained in another CDS; hca operon transcriptional regulator complement(2668006..2668896) Escherichia coli str. K-12 substr. MG1655 947000 YP_008592385.1 CDS iroK NC_000913.3 2668006 2668071 R completely contained in another CDS; 3-hydroxypropionic acid resistance peptide complement(2668006..2668071) Escherichia coli str. K-12 substr. MG1655 14678510 NP_417033.1 CDS hcaE NC_000913.3 2669032 2670393 D 3-phenylpropionate dioxygenase, large (alpha) subunit 2669032..2670393 Escherichia coli str. K-12 substr. MG1655 946998 NP_417034.1 CDS hcaF NC_000913.3 2670390 2670908 D small terminal subunit of phenylpropionate dioxygenase; 3-phenylpropionate dioxygenase, small (beta) subunit 2670390..2670908 Escherichia coli str. K-12 substr. MG1655 946997 NP_417035.1 CDS hcaC NC_000913.3 2670908 2671228 D ferredoxin subunit of phenylpropionate dioxygenase; 3-phenylpropionate dioxygenase, ferredoxin subunit 2670908..2671228 Escherichia coli str. K-12 substr. MG1655 947015 NP_417036.1 CDS hcaB NC_000913.3 2671225 2672037 D 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2671225..2672037 Escherichia coli str. K-12 substr. MG1655 945346 NP_417037.1 CDS hcaD NC_000913.3 2672047 2673249 D ferredoxin reductase subunit of phenylpropionate dioxygenase; phenylpropionate dioxygenase, ferredoxin reductase subunit 2672047..2673249 Escherichia coli str. K-12 substr. MG1655 945427 NP_417038.4 CDS yphA NC_000913.3 2673346 2673768 D DoxX family inner membrane protein 2673346..2673768 Escherichia coli str. K-12 substr. MG1655 947365 NP_417039.1 CDS yphB NC_000913.3 2673816 2674688 R mutarotase superfamily protein, YphB family complement(2673816..2674688) Escherichia coli str. K-12 substr. MG1655 947017 NP_417040.2 CDS yphC NC_000913.3 2674700 2675761 R putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase complement(2674700..2675761) Escherichia coli str. K-12 substr. MG1655 947019 NP_417041.1 CDS yphD NC_000913.3 2675827 2676825 R putative transport system permease protein; inner membrane putative ABC superfamily sugar transporter permease complement(2675827..2676825) Escherichia coli str. K-12 substr. MG1655 949063 NP_417042.1 CDS yphE NC_000913.3 2676850 2678361 R putative ATP-binding component of a transport system; putative sugar transporter subunit of ABC superfamily, ATP-binding component complement(2676850..2678361) Escherichia coli str. K-12 substr. MG1655 948990 NP_417043.1 CDS yphF NC_000913.3 2678384 2679367 R putative LACI-type transcriptional regulator; putative ABC superfamily sugar transporter periplasmic-binding protein complement(2678384..2679367) Escherichia coli str. K-12 substr. MG1655 947020 NP_417044.4 CDS yphG NC_000913.3 2679464 2682745 R DUF4380 domain-containing TPR repeat protein complement(2679464..2682745) Escherichia coli str. K-12 substr. MG1655 947021 NP_417045.4 CDS yphH NC_000913.3 2682863 2684056 D putative NAGC-like transcriptional regulator; putative DNA-binding transcriptional regulator 2682863..2684056 Escherichia coli str. K-12 substr. MG1655 947023 NP_417046.1 CDS glyA NC_000913.3 2684254 2685507 R serine hydroxymethyltransferase complement(2684254..2685507) Escherichia coli str. K-12 substr. MG1655 947022 NP_417047.1 CDS hmp NC_000913.3 2685835 2687025 D dihydropteridine reductase, ferrisiderophore reductase activity; fused nitric oxide dioxygenase/dihydropteridine reductase 2 2685835..2687025 Escherichia coli str. K-12 substr. MG1655 947018 NP_417048.1 CDS glnB NC_000913.3 2687070 2687408 R regulatory protein P-II for glutamine synthetase complement(2687070..2687408) Escherichia coli str. K-12 substr. MG1655 947016 NP_417049.1 CDS glrR NC_000913.3 2687469 2688803 R putative 2-component transcriptional regulator; response regulator regulating glmY sRNA in two-component system with sensor protein GlrK complement(2687469..2688803) Escherichia coli str. K-12 substr. MG1655 947042 NP_417050.1 CDS yfhG NC_000913.3 2688793 2689506 R putative alpha helix protein; putative outer membrane protein modulating the QseEF response complement(2688793..2689506) Escherichia coli str. K-12 substr. MG1655 947010 NP_417051.2 CDS glrK NC_000913.3 2689671 2691098 R putative 2-component sensor protein; sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR complement(2689671..2691098) Escherichia coli str. K-12 substr. MG1655 947013 YP_026170.1 CDS purL NC_000913.3 2691656 2695543 R phosphoribosylformyl-glycineamide synthetase = FGAM synthetase; phosphoribosylformyl-glycineamide synthetase complement(2691656..2695543) Escherichia coli str. K-12 substr. MG1655 947032 NP_417053.2 CDS mltF NC_000913.3 2695801 2697357 D putative periplasmic binding transport protein; membrane-bound lytic transglycosylase F, murein hydrolase 2695801..2697357 Escherichia coli str. K-12 substr. MG1655 947028 NP_417054.2 CDS tadA NC_000913.3 2697354 2697857 R tRNA-specific adenosine deaminase complement(2697354..2697857) Escherichia coli str. K-12 substr. MG1655 947027 NP_417055.4 CDS pgpC NC_000913.3 2697915 2698550 R phosphatidylglycerophosphatase C, membrane bound complement(2697915..2698550) Escherichia coli str. K-12 substr. MG1655 947026 NP_417056.2 CDS yfhH NC_000913.3 2698759 2699607 D putative DNA-binding transcriptional regulator 2698759..2699607 Escherichia coli str. K-12 substr. MG1655 947030 NP_417057.1 CDS yfhL NC_000913.3 2699663 2699923 D putative 4Fe-4S cluster-containing protein 2699663..2699923 Escherichia coli str. K-12 substr. MG1655 947031 YP_002791251.1 CDS shoB NC_000913.3 2700117 2700197 R toxic membrane protein complement(2700117..2700197) Escherichia coli str. K-12 substr. MG1655 7751620 NP_417058.1 CDS acpS NC_000913.3 2700618 2700998 R CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase; holo-[acyl-carrier-protein] synthase 1 complement(2700618..2700998) Escherichia coli str. K-12 substr. MG1655 947037 NP_417059.1 CDS pdxJ NC_000913.3 2700998 2701729 R pyridoxine biosynthesis; pyridoxine 5'-phosphate synthase complement(2700998..2701729) Escherichia coli str. K-12 substr. MG1655 947039 NP_417060.1 CDS recO NC_000913.3 2701741 2702469 R protein interacts with RecR and possibly RecF proteins; gap repair protein complement(2701741..2702469) Escherichia coli str. K-12 substr. MG1655 947038 NP_417061.1 CDS era NC_000913.3 2702481 2703386 R GTP-binding protein; membrane-associated, 16S rRNA-binding GTPase complement(2702481..2703386) Escherichia coli str. K-12 substr. MG1655 947036 NP_417062.1 CDS rnc NC_000913.3 2703383 2704063 R RNase III, ds RNA; RNase III complement(2703383..2704063) Escherichia coli str. K-12 substr. MG1655 947033 NP_417063.1 CDS lepB NC_000913.3 2704335 2705309 R leader peptidase (signal peptidase I) complement(2704335..2705309) Escherichia coli str. K-12 substr. MG1655 947040 NP_417064.1 CDS lepA NC_000913.3 2705325 2707124 R GTP-binding elongation factor, may be inner membrane protein; back-translocating elongation factor EF4, GTPase complement(2705325..2707124) Escherichia coli str. K-12 substr. MG1655 947051 NP_417065.1 CDS rseC NC_000913.3 2707322 2707801 R sigma-E factor, negative regulatory protein; SoxR iron-sulfur cluster reduction factor component; with RsxABCDEG complement(2707322..2707801) Escherichia coli str. K-12 substr. MG1655 947052 NP_417066.1 CDS rseB NC_000913.3 2707798 2708754 R regulates activity of sigma-E factor; anti-sigma E factor, binds RseA complement(2707798..2708754) Escherichia coli str. K-12 substr. MG1655 947054 NP_417067.1 CDS rseA NC_000913.3 2708754 2709404 R sigma-E factor, negative regulatory protein; anti-sigma factor complement(2708754..2709404) Escherichia coli str. K-12 substr. MG1655 947053 NP_417068.1 CDS rpoE NC_000913.3 2709437 2710012 R RNA polymerase, sigma-E factor; heat shock and oxidative stress; RNA polymerase sigma E factor complement(2709437..2710012) Escherichia coli str. K-12 substr. MG1655 947050 NP_417069.1 CDS nadB NC_000913.3 2710420 2712042 D quinolinate synthetase, B protein; quinolinate synthase, L-aspartate oxidase (B protein) subunit 2710420..2712042 Escherichia coli str. K-12 substr. MG1655 947049 NP_417070.2 CDS trmN NC_000913.3 2712027 2712764 R putative enzyme; tRNA1(Val) (adenine(37)-N6)-methyltransferase complement(2712027..2712764) Escherichia coli str. K-12 substr. MG1655 947047 NP_417071.1 CDS srmB NC_000913.3 2712896 2714230 D ATP-dependent RNA helicase 2712896..2714230 Escherichia coli str. K-12 substr. MG1655 947055 NP_417072.4 CDS yfiE NC_000913.3 2714439 2715320 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(2714439..2715320) Escherichia coli str. K-12 substr. MG1655 947064 NP_417073.1 CDS eamB NC_000913.3 2715423 2716010 D cysteine and O-acetylserine exporter 2715423..2716010 Escherichia coli str. K-12 substr. MG1655 947065 NP_417074.1 CDS grcA NC_000913.3 2716066 2716449 R putative formate acetyltransferase; autonomous glycyl radical cofactor complement(2716066..2716449) Escherichia coli str. K-12 substr. MG1655 947068 NP_417075.1 CDS ung NC_000913.3 2716754 2717443 D uracil-DNA-glycosylase 2716754..2717443 Escherichia coli str. K-12 substr. MG1655 947067 NP_417076.1 CDS yfiF NC_000913.3 2717491 2718528 R putative methyltransferase complement(2717491..2718528) Escherichia coli str. K-12 substr. MG1655 947066 NP_417077.1 CDS trxC NC_000913.3 2718735 2719154 D putative thioredoxin-like protein; thioredoxin 2 2718735..2719154 Escherichia coli str. K-12 substr. MG1655 947062 NP_417078.4 CDS yfiP NC_000913.3 2719223 2719921 D DTW domain protein 2719223..2719921 Escherichia coli str. K-12 substr. MG1655 947057 NP_417079.1 CDS pka NC_000913.3 2719953 2722613 D protein lysine acetyltransferase 2719953..2722613 Escherichia coli str. K-12 substr. MG1655 947056 NP_417080.4 CDS pssA NC_000913.3 2722727 2724082 D phosphatidylserine synthase; phospholipid synthesis; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) 2722727..2724082 Escherichia coli str. K-12 substr. MG1655 947059 NP_417081.2 CDS yfiM NC_000913.3 2724128 2724451 D putative lipoprotein 2724128..2724451 Escherichia coli str. K-12 substr. MG1655 947060 NP_417082.1 CDS kgtP NC_000913.3 2724448 2725746 R alpha-ketoglutarate permease; alpha-ketoglutarate transporter complement(2724448..2725746) Escherichia coli str. K-12 substr. MG1655 947069 NP_417083.1 CDS clpB NC_000913.3 2731600 2734173 R heat shock protein; protein disaggregation chaperone complement(2731600..2734173) Escherichia coli str. K-12 substr. MG1655 947077 NP_417084.1 CDS yfiH NC_000913.3 2734303 2735034 R UPF0124 family protein complement(2734303..2735034) Escherichia coli str. K-12 substr. MG1655 947089 NP_417085.1 CDS rluD NC_000913.3 2735031 2736011 R 23S rRNA pseudouridine(1911,1915,1917) synthase complement(2735031..2736011) Escherichia coli str. K-12 substr. MG1655 947087 NP_417086.1 CDS bamD NC_000913.3 2736146 2736883 D BamABCDE complex OM biogenesis lipoprotein 2736146..2736883 Escherichia coli str. K-12 substr. MG1655 947086 NP_417088.1 CDS raiA NC_000913.3 2737154 2737495 D putative yhbH sigma 54 modulator; cold shock protein associated with 30S ribosomal subunit 2737154..2737495 Escherichia coli str. K-12 substr. MG1655 947129 NP_417089.1 CDS pheL NC_000913.3 2737599 2737646 D leader peptide of chorismate mutase-P-prephenate dehydratase; pheA gene leader peptide 2737599..2737646 Escherichia coli str. K-12 substr. MG1655 947080 NP_417090.1 CDS pheA NC_000913.3 2737745 2738905 D chorismate mutase-P and prephenate dehydratase; chorismate mutase and prephenate dehydratase, P-protein 2737745..2738905 Escherichia coli str. K-12 substr. MG1655 947081 NP_417091.1 CDS tyrA NC_000913.3 2738948 2740069 R chorismate mutase-T and prephenate dehydrogenase; fused chorismate mutase T/prephenate dehydrogenase complement(2738948..2740069) Escherichia coli str. K-12 substr. MG1655 947115 NP_417092.1 CDS aroF NC_000913.3 2740080 2741150 R 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible complement(2740080..2741150) Escherichia coli str. K-12 substr. MG1655 947084 NP_417093.2 CDS yfiL NC_000913.3 2741360 2741725 D lipoprotein 2741360..2741725 Escherichia coli str. K-12 substr. MG1655 947106 NP_417094.1 CDS yfiR NC_000913.3 2741875 2742393 D putative periplasmic inhibitor of YfiN activity 2741875..2742393 Escherichia coli str. K-12 substr. MG1655 947090 NP_417095.1 CDS yfiN NC_000913.3 2742383 2743609 D putative membrane-anchored diguanylate cyclase with an N-terminal periplasmic domain 2742383..2743609 Escherichia coli str. K-12 substr. MG1655 947091 NP_417096.1 CDS yfiB NC_000913.3 2743625 2744107 D putative outer membrane protein; OM lipoprotein putative positive effector of YfiN activity 2743625..2744107 Escherichia coli str. K-12 substr. MG1655 947094 NP_417097.1 CDS rplS NC_000913.3 2744183 2744530 R 50S ribosomal subunit protein L19 complement(2744183..2744530) Escherichia coli str. K-12 substr. MG1655 947096 NP_417098.1 CDS trmD NC_000913.3 2744572 2745339 R tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase; tRNA m(1)G37 methyltransferase, SAM-dependent complement(2744572..2745339) Escherichia coli str. K-12 substr. MG1655 947099 NP_417099.4 CDS rimM NC_000913.3 2745370 2745918 R 16S rRNA processing protein complement(2745370..2745918) Escherichia coli str. K-12 substr. MG1655 947101 NP_417100.1 CDS rpsP NC_000913.3 2745937 2746185 R 30S ribosomal subunit protein S16 complement(2745937..2746185) Escherichia coli str. K-12 substr. MG1655 947103 NP_417101.1 CDS ffh NC_000913.3 2746434 2747795 R GTP-binding export factor binds to signal sequence, GTP and RNA; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) complement(2746434..2747795) Escherichia coli str. K-12 substr. MG1655 947102 NP_417102.4 CDS ypjD NC_000913.3 2747962 2748753 D cytochrome c assembly protein family inner membrane protein 2747962..2748753 Escherichia coli str. K-12 substr. MG1655 947098 YP_026171.3 CDS yfjD NC_000913.3 2748774 2750060 D putative membrane protein; UPF0053 family inner membrane protein 2748774..2750060 Escherichia coli str. K-12 substr. MG1655 2847739 NP_417104.1 CDS grpE NC_000913.3 2750115 2750708 R phage lambda replication; host DNA synthesis; heat shock protein; protein repair; heat shock protein complement(2750115..2750708) Escherichia coli str. K-12 substr. MG1655 947097 NP_417105.1 CDS nadK NC_000913.3 2750831 2751709 D NAD kinase 2750831..2751709 Escherichia coli str. K-12 substr. MG1655 947092 YP_026172.1 CDS recN NC_000913.3 2751795 2753456 D protein used in recombination and DNA repair; recombination and repair protein 2751795..2753456 Escherichia coli str. K-12 substr. MG1655 947105 NP_417107.2 CDS bamE NC_000913.3 2753605 2753946 D small membrane protein A; lipoprotein component of BamABCDE OM biogenesis complex 2753605..2753946 Escherichia coli str. K-12 substr. MG1655 945583 NP_417108.4 CDS ratB NC_000913.3 2754008 2754298 R UPF0125 family protein complement(2754008..2754298) Escherichia coli str. K-12 substr. MG1655 945078 NP_417109.1 CDS ratA NC_000913.3 2754288 2754764 R toxic UPF0083 family protein inhibitor of 70S ribosome formation complement(2754288..2754764) Escherichia coli str. K-12 substr. MG1655 945614 NP_417110.1 CDS smpB NC_000913.3 2754896 2755378 D small protein B; trans-translation protein 2754896..2755378 Escherichia coli str. K-12 substr. MG1655 947296 NP_417111.1 CDS intA NC_000913.3 2756159 2757400 D prophage CP4-57 integrase; CP4-57 prophage; integrase 2756159..2757400 Escherichia coli str. K-12 substr. MG1655 946160 NP_417112.1 CDS yfjH NC_000913.3 2757644 2758600 R putative histone; CP4-57 prophage; uncharacterized protein complement(2757644..2758600) Escherichia coli str. K-12 substr. MG1655 946123 NP_417113.1 CDS alpA NC_000913.3 2758644 2758856 D prophage CP4-57 regulatory protein alpA; CP4-57 prophage; DNA-binding transcriptional activator 2758644..2758856 Escherichia coli str. K-12 substr. MG1655 946758 NP_417114.1 CDS yfjI NC_000913.3 2758985 2760394 D CP4-57 prophage; uncharacterized protein 2758985..2760394 Escherichia coli str. K-12 substr. MG1655 944764 NP_417115.1 CDS yfjJ NC_000913.3 2760547 2761173 D CP4-57 prophage; uncharacterized protein 2760547..2761173 Escherichia coli str. K-12 substr. MG1655 947112 NP_417116.1 CDS yfjK NC_000913.3 2761351 2763540 R DEAD/H helicase-like protein, CP4-57 putative defective prophage complement(2761351..2763540) Escherichia coli str. K-12 substr. MG1655 947111 NP_417117.1 CDS yfjL NC_000913.3 2763537 2765153 R CP4-57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein complement(2763537..2765153) Escherichia coli str. K-12 substr. MG1655 947110 NP_417118.1 CDS yfjM NC_000913.3 2765513 2765776 R CP4-57 prophage; uncharacterized protein complement(2765513..2765776) Escherichia coli str. K-12 substr. MG1655 947108 NP_417119.1 CDS rnlA NC_000913.3 2765918 2766991 D putative cell division protein; CP4-57 prophage; RNase LS 2765918..2766991 Escherichia coli str. K-12 substr. MG1655 947107 NP_417120.2 CDS rnlB NC_000913.3 2766984 2767355 D CP4-57 prophage; uncharacterized protein 2766984..2767355 Escherichia coli str. K-12 substr. MG1655 947113 YP_026173.1 CDS yfjP NC_000913.3 2767710 2768573 D putative GTP-binding protein; CP4-57 prophage; 50S ribosome-binding GTPase family protein 2767710..2768573 Escherichia coli str. K-12 substr. MG1655 947124 NP_417122.1 CDS yfjQ NC_000913.3 2768665 2769486 D CP4-57 prophage; uncharacterized protein 2768665..2769486 Escherichia coli str. K-12 substr. MG1655 947127 NP_417123.1 CDS yfjR NC_000913.3 2769703 2770404 D CP4-57 prophage; putative DNA-binding transcriptional regulator 2769703..2770404 Escherichia coli str. K-12 substr. MG1655 947309 YP_026174.2 CDS ypjK NC_000913.3 2770445 2770681 D CP4-57 prophage; putative inner membrane protein 2770445..2770681 Escherichia coli str. K-12 substr. MG1655 2847710 NP_417124.4 CDS yfjS NC_000913.3 2770681 2771124 D CP4-57 prophage; uncharacterized protein 2770681..2771124 Escherichia coli str. K-12 substr. MG1655 945668 NP_417125.1 CDS yfjT NC_000913.3 2771148 2771615 D CP4-57 prophage; putative periplasmic protein 2771148..2771615 Escherichia coli str. K-12 substr. MG1655 947616 b2638 CDS yfjU NC_000913.3 2772002 2772154 R CP4-57 prophage; conserved protein;Phage or Prophage Related; complement(2772002..2772154) Escherichia coli str. K-12 substr. MG1655 945062 b2641 CDS yfjV NC_000913.3 2772167 2773182 R pseudogene, CP4-57 prophage;Phage or Prophage Related; putative pump protein; complement(join(2772167..2773066,2773066..2773182)) Escherichia coli str. K-12 substr. MG1655 947563 NP_417129.1 CDS yfjW NC_000913.3 2773318 2775021 D CP4-57 prophage; putative inner membrane protein 2773318..2775021 Escherichia coli str. K-12 substr. MG1655 947128 b4644 CDS ypjI NC_000913.3 2775545 2775816 D pseudogene, CP4-57 putative prophage remnant;Phage or Prophage Related; join(2775545..2775724,2775724..2775816) Escherichia coli str. K-12 substr. MG1655 5625570 NP_417130.1 CDS yfjX NC_000913.3 2775919 2776377 D CP4-57 prophage; putative antirestriction protein 2775919..2776377 Escherichia coli str. K-12 substr. MG1655 947126 NP_417131.1 CDS yfjY NC_000913.3 2776386 2776868 D putative DNA repair protein; CP4-57 prophage; putative DNA repair protein 2776386..2776868 Escherichia coli str. K-12 substr. MG1655 947125 YP_588466.1 CDS ypjJ NC_000913.3 2776877 2777077 D uncharacterized protein 2776877..2777077 Escherichia coli str. K-12 substr. MG1655 1450287 NP_417132.1 CDS yfjZ NC_000913.3 2777115 2777432 D CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system 2777115..2777432 Escherichia coli str. K-12 substr. MG1655 947123 NP_417133.1 CDS ypjF NC_000913.3 2777453 2777782 D CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system 2777453..2777782 Escherichia coli str. K-12 substr. MG1655 947131 NP_417134.2 CDS ypjA NC_000913.3 2778146 2782726 R putative ATP-binding component of a transport system; adhesin-like autotransporter complement(2778146..2782726) Escherichia coli str. K-12 substr. MG1655 948630 b2648 CDS pinH NC_000913.3 2783065 2783304 R pseudogene, invertase resolvase family; complement(2783065..2783304) Escherichia coli str. K-12 substr. MG1655 947250 b2650 CDS ypjC NC_000913.3 2783638 2785011 R pseudogene; complement(2783638..2785011) Escherichia coli str. K-12 substr. MG1655 947640 b4462 CDS ygaQ NC_000913.3 2786397 2788649 D uncharacterized protein; putative enzyme; 2786397..2788649 Escherichia coli str. K-12 substr. MG1655 2847762 NP_417145.4 CDS csiD NC_000913.3 2788985 2789962 D carbon starvation protein 2788985..2789962 Escherichia coli str. K-12 substr. MG1655 948076 NP_417146.2 CDS lhgO NC_000913.3 2789982 2791250 D L-2-hydroxyglutarate oxidase 2789982..2791250 Escherichia coli str. K-12 substr. MG1655 948069 NP_417147.1 CDS gabD NC_000913.3 2791273 2792721 D succinate-semialdehyde dehydrogenase, NADP-dependent activity; succinate-semialdehyde dehydrogenase I, NADP-dependent 2791273..2792721 Escherichia coli str. K-12 substr. MG1655 948060 NP_417148.1 CDS gabT NC_000913.3 2792735 2794015 D 4-aminobutyrate aminotransferase activity; 4-aminobutyrate aminotransferase, PLP-dependent 2792735..2794015 Escherichia coli str. K-12 substr. MG1655 948067 NP_417149.1 CDS gabP NC_000913.3 2794253 2795653 D transport permease protein of gamma-aminobutyrate; gamma-aminobutyrate transporter 2794253..2795653 Escherichia coli str. K-12 substr. MG1655 948049 NP_417150.4 CDS csiR NC_000913.3 2795674 2796336 D putative transcriptional regulator; transcriptional repressor of csiD 2795674..2796336 Escherichia coli str. K-12 substr. MG1655 948055 NP_417151.1 CDS ygaU NC_000913.3 2796337 2796786 R uncharacterized protein complement(2796337..2796786) Escherichia coli str. K-12 substr. MG1655 947144 NP_417152.1 CDS yqaE NC_000913.3 2796870 2797028 R cyaR sRNA-regulated protein complement(2796870..2797028) Escherichia coli str. K-12 substr. MG1655 947138 NP_417153.1 CDS ygaV NC_000913.3 2797211 2797510 D tributyltin-inducible repressor of ygaVP 2797211..2797510 Escherichia coli str. K-12 substr. MG1655 947136 NP_417154.1 CDS ygaP NC_000913.3 2797520 2798044 D DUF2892 family inner membrane rhodanese 2797520..2798044 Escherichia coli str. K-12 substr. MG1655 947135 NP_417155.1 CDS stpA NC_000913.3 2798091 2798495 R DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing?; DNA binding protein, nucleoid-associated complement(2798091..2798495) Escherichia coli str. K-12 substr. MG1655 947130 NP_417156.1 CDS alaE NC_000913.3 2799164 2799613 D alanine exporter, alanine-inducible, stress-responsive 2799164..2799613 Escherichia coli str. K-12 substr. MG1655 947147 NP_417157.1 CDS ygaC NC_000913.3 2799650 2799994 R uncharacterized protein complement(2799650..2799994) Escherichia coli str. K-12 substr. MG1655 947156 NP_417158.4 CDS ygaM NC_000913.3 2800146 2800475 D DUF883 family protein, putative membrane-anchored ribosome-binding protein 2800146..2800475 Escherichia coli str. K-12 substr. MG1655 947157 NP_417159.1 CDS nrdH NC_000913.3 2800723 2800968 D glutaredoxin-like protein; hydrogen donor; hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein 2800723..2800968 Escherichia coli str. K-12 substr. MG1655 947161 NP_417160.1 CDS nrdI NC_000913.3 2800965 2801375 D NrdEF cluster assembly flavodoxin 2800965..2801375 Escherichia coli str. K-12 substr. MG1655 947158 NP_417161.1 CDS nrdE NC_000913.3 2801348 2803492 D ribonucleoside-diphosphate reductase 2, alpha subunit 2801348..2803492 Escherichia coli str. K-12 substr. MG1655 947155 NP_417162.1 CDS nrdF NC_000913.3 2803502 2804461 D ribonucleoside-diphosphate reductase 2, beta chain, frag; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein 2803502..2804461 Escherichia coli str. K-12 substr. MG1655 947149 NP_417163.1 CDS proV NC_000913.3 2804815 2806017 D ATP-binding component of transport system for glycine, betaine and proline; glycine betaine transporter subunit 2804815..2806017 Escherichia coli str. K-12 substr. MG1655 947148 NP_417164.1 CDS proW NC_000913.3 2806010 2807074 D high-affinity transport system for glycine betaine and proline; membrane component of ABC superfamily; glycine betaine transporter subunit 2806010..2807074 Escherichia coli str. K-12 substr. MG1655 947145 NP_417165.1 CDS proX NC_000913.3 2807132 2808124 D high-affinity transport system for glycine betaine and proline; periplasmic-binding component of ABC superfamily; glycine betaine transporter subunit 2807132..2808124 Escherichia coli str. K-12 substr. MG1655 947165 b2681 CDS ygaY NC_000913.3 2808316 2809493 D pseudogene, major facilitator transporter superfamily;putative transport; Not classified; putative transport protein; 2808316..2809493 Escherichia coli str. K-12 substr. MG1655 2847696 NP_417167.1 CDS ygaZ NC_000913.3 2809617 2810354 D putative L-valine exporter, norvaline resistance protein 2809617..2810354 Escherichia coli str. K-12 substr. MG1655 945093 NP_417168.1 CDS ygaH NC_000913.3 2810344 2810679 D putative L-valine exporter, norvaline resistance protein 2810344..2810679 Escherichia coli str. K-12 substr. MG1655 945111 NP_417169.1 CDS mprA NC_000913.3 2810770 2811300 D regulator of plasmid mcrB operon (microcin B17 synthesis); transcriptional repressor of microcin B17 synthesis and multidrug efflux 2810770..2811300 Escherichia coli str. K-12 substr. MG1655 945282 NP_417170.1 CDS emrA NC_000913.3 2811427 2812599 D multidrug resistance secretion protein; multidrug efflux system 2811427..2812599 Escherichia coli str. K-12 substr. MG1655 947166 NP_417171.1 CDS emrB NC_000913.3 2812616 2814154 D multidrug resistance; probably membrane translocase; multidrug efflux system protein 2812616..2814154 Escherichia coli str. K-12 substr. MG1655 947167 NP_417172.1 CDS luxS NC_000913.3 2814218 2814733 R S-ribosylhomocysteine lyase complement(2814218..2814733) Escherichia coli str. K-12 substr. MG1655 947168 NP_417173.1 CDS gshA NC_000913.3 2814883 2816439 R glutamate-cysteine ligase complement(2814883..2816439) Escherichia coli str. K-12 substr. MG1655 944881 NP_417174.1 CDS yqaA NC_000913.3 2816512 2816940 R COG1238 family inner membrane protein complement(2816512..2816940) Escherichia coli str. K-12 substr. MG1655 945419 NP_417175.1 CDS yqaB NC_000913.3 2816937 2817503 R putative phosphatase; fructose-1-P and 6-phosphogluconate phosphatase complement(2816937..2817503) Escherichia coli str. K-12 substr. MG1655 945776 NP_417176.1 CDS csrA NC_000913.3 2818961 2819146 R carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties; pleiotropic regulatory protein for carbon source metabolism complement(2818961..2819146) Escherichia coli str. K-12 substr. MG1655 947176 NP_417177.1 CDS alaS NC_000913.3 2819381 2822011 R alanyl-tRNA synthetase complement(2819381..2822011) Escherichia coli str. K-12 substr. MG1655 947175 NP_417178.1 CDS recX NC_000913.3 2822139 2822639 R regulator, OraA protein; regulatory protein for RecA complement(2822139..2822639) Escherichia coli str. K-12 substr. MG1655 947172 NP_417179.1 CDS recA NC_000913.3 2822708 2823769 R DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein forming filaments; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor complement(2822708..2823769) Escherichia coli str. K-12 substr. MG1655 947170 NP_417180.1 CDS pncC NC_000913.3 2823849 2824346 R nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase complement(2823849..2824346) Escherichia coli str. K-12 substr. MG1655 947169 NP_417181.1 CDS mltB NC_000913.3 2824491 2825576 R membrane-bound lytic murein transglycosylase B complement(2824491..2825576) Escherichia coli str. K-12 substr. MG1655 947184 YP_026180.1 CDS srlA NC_000913.3 2825832 2826395 D PTS system, glucitol/sorbitol-specific IIC component, one of two; glucitol/sorbitol-specific enzyme IIC component of PTS 2825832..2826395 Escherichia coli str. K-12 substr. MG1655 947575 YP_026181.1 CDS srlE NC_000913.3 2826392 2827351 D PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components; glucitol/sorbitol-specific enzyme IIB component of PTS 2826392..2827351 Escherichia coli str. K-12 substr. MG1655 948933 NP_417184.1 CDS srlB NC_000913.3 2827362 2827733 D PTS system, glucitol/sorbitol-specific enzyme IIA component; glucitol/sorbitol-specific enzyme IIA component of PTS 2827362..2827733 Escherichia coli str. K-12 substr. MG1655 948971 NP_417185.1 CDS srlD NC_000913.3 2827737 2828516 D glucitol (sorbitol)-6-phosphate dehydrogenase; sorbitol-6-phosphate dehydrogenase 2827737..2828516 Escherichia coli str. K-12 substr. MG1655 948937 NP_417186.1 CDS srlM NC_000913.3 2828621 2828980 D glucitol operon activator; sorbitol-responsive srl operon transcriptional activator 2828621..2828980 Escherichia coli str. K-12 substr. MG1655 948938 NP_417187.1 CDS srlR NC_000913.3 2829047 2829820 D regulator for gut (srl), glucitol operon; sorbitol-inducible srl operon transcriptional repressor 2829047..2829820 Escherichia coli str. K-12 substr. MG1655 948942 NP_417188.4 CDS srlQ NC_000913.3 2829813 2830778 D D-arabinose 5-phosphate isomerase 2829813..2830778 Escherichia coli str. K-12 substr. MG1655 947587 NP_417189.2 CDS norR NC_000913.3 2830775 2832289 R putative 2-component transcriptional regulator; anaerobic nitric oxide reductase DNA-binding transcriptional activator complement(2830775..2832289) Escherichia coli str. K-12 substr. MG1655 947186 NP_417190.1 CDS norV NC_000913.3 2832476 2833915 D putative flavodoxin; anaerobic nitric oxide reductase flavorubredoxin 2832476..2833915 Escherichia coli str. K-12 substr. MG1655 948979 NP_417191.1 CDS norW NC_000913.3 2833912 2835045 D putative oxidoreductase; NADH:flavorubredoxin oxidoreductase 2833912..2835045 Escherichia coli str. K-12 substr. MG1655 947088 NP_417192.1 CDS hypF NC_000913.3 2835173 2837425 R transcriptional regulatory protein; carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases complement(2835173..2837425) Escherichia coli str. K-12 substr. MG1655 944963 NP_417193.1 CDS hydN NC_000913.3 2837578 2838105 R involved in electron transport from formate to hydrogen, Fe-S centers; formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit complement(2837578..2838105) Escherichia coli str. K-12 substr. MG1655 947190 NP_417194.2 CDS ascG NC_000913.3 2838254 2839264 R ascBF operon repressor; asc operon transcriptional repressor; prpBC operon repressor complement(2838254..2839264) Escherichia coli str. K-12 substr. MG1655 947305 YP_026182.1 CDS ascF NC_000913.3 2839524 2840981 D PTS system enzyme II ABC (asc), cryptic, transports specific beta-glucosides; fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component 2839524..2840981 Escherichia coli str. K-12 substr. MG1655 947154 NP_417196.1 CDS ascB NC_000913.3 2840990 2842414 D 6-phospho-beta-glucosidase; cryptic; cryptic 6-phospho-beta-glucosidase 2840990..2842414 Escherichia coli str. K-12 substr. MG1655 947460 NP_417197.1 CDS hycI NC_000913.3 2842573 2843043 R protease involved in processing C-terminal end of the large subunit of hydrogenase 3; protease involved in processing C-terminal end of HycE complement(2842573..2843043) Escherichia coli str. K-12 substr. MG1655 947428 NP_417198.1 CDS hycH NC_000913.3 2843036 2843446 R processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex); hydrogenase 3 maturation protein complement(2843036..2843446) Escherichia coli str. K-12 substr. MG1655 947438 NP_417199.1 CDS hycG NC_000913.3 2843443 2844210 R hydrogenase activity; hydrogenase 3 and formate hydrogenase complex, HycG subunit complement(2843443..2844210) Escherichia coli str. K-12 substr. MG1655 947191 NP_417200.1 CDS hycF NC_000913.3 2844210 2844752 R probable iron-sulfur protein of hydrogenase 3 (part of FHL complex); formate hydrogenlyase complex iron-sulfur protein complement(2844210..2844752) Escherichia coli str. K-12 substr. MG1655 947048 NP_417201.1 CDS hycE NC_000913.3 2844762 2846471 R large subunit of hydrogenase 3 (part of FHL complex); hydrogenase 3, large subunit complement(2844762..2846471) Escherichia coli str. K-12 substr. MG1655 947396 NP_417202.1 CDS hycD NC_000913.3 2846489 2847412 R membrane-spanning protein of hydrogenase 3 (part of FHL complex); hydrogenase 3, membrane subunit complement(2846489..2847412) Escherichia coli str. K-12 substr. MG1655 948994 NP_417203.1 CDS hycC NC_000913.3 2847415 2849241 R membrane-spanning protein of hydrogenase 3 (part of FHL complex); hydrogenase 3, membrane subunit complement(2847415..2849241) Escherichia coli str. K-12 substr. MG1655 945327 NP_417204.1 CDS hycB NC_000913.3 2849238 2849849 R probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex); hydrogenase 3, Fe-S subunit complement(2849238..2849849) Escherichia coli str. K-12 substr. MG1655 948002 NP_417205.1 CDS hycA NC_000913.3 2849974 2850435 R transcriptional repression of hyc and hyp operons; regulator of the transcriptional regulator FhlA complement(2849974..2850435) Escherichia coli str. K-12 substr. MG1655 947193 NP_417206.1 CDS hypA NC_000913.3 2850647 2850997 D pleiotrophic effects on 3 hydrogenase isozymes; protein involved in nickel insertion into hydrogenases 3 2850647..2850997 Escherichia coli str. K-12 substr. MG1655 947195 NP_417207.1 CDS hypB NC_000913.3 2851001 2851873 D guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3; GTP hydrolase involved in nickel liganding into hydrogenases 2851001..2851873 Escherichia coli str. K-12 substr. MG1655 947194 NP_417208.1 CDS hypC NC_000913.3 2851864 2852136 D pleiotrophic effects on 3 hydrogenase isozymes; hydrogenase maturation protein 2851864..2852136 Escherichia coli str. K-12 substr. MG1655 947192 NP_417209.1 CDS hypD NC_000913.3 2852136 2853257 D pleiotrophic effects on 3 hydrogenase isozymes; hydrogenase maturation protein 2852136..2853257 Escherichia coli str. K-12 substr. MG1655 947189 NP_417210.2 CDS hypE NC_000913.3 2853254 2854264 D plays structural role in maturation of all 3 hydrogenases; carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein 2853254..2854264 Escherichia coli str. K-12 substr. MG1655 947182 NP_417211.1 CDS fhlA NC_000913.3 2854338 2856416 D formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; formate hydrogenlyase transcriptional activator 2854338..2856416 Escherichia coli str. K-12 substr. MG1655 947181 NP_417212.1 CDS ygbA NC_000913.3 2856453 2856806 R uncharacterized protein complement(2856453..2856806) Escherichia coli str. K-12 substr. MG1655 947187 NP_417213.1 CDS mutS NC_000913.3 2857093 2859654 D methyl-directed mismatch repair; methyl-directed mismatch repair protein 2857093..2859654 Escherichia coli str. K-12 substr. MG1655 947206 NP_417214.1 CDS pphB NC_000913.3 2859760 2860416 D protein phosphatase 2; serine/threonine-specific protein phosphatase 2 2859760..2860416 Escherichia coli str. K-12 substr. MG1655 947196 NP_417215.2 CDS ygbI NC_000913.3 2860467 2861234 R putative DEOR-type transcriptional regulator; DeoR family putative transcriptional regulator complement(2860467..2861234) Escherichia coli str. K-12 substr. MG1655 947204 NP_417216.1 CDS ygbJ NC_000913.3 2861430 2862338 D putative dehydrogenase 2861430..2862338 Escherichia coli str. K-12 substr. MG1655 947200 NP_417217.1 CDS ygbK NC_000913.3 2862335 2863501 D FliA-regulated DUF1537 family protein 2862335..2863501 Escherichia coli str. K-12 substr. MG1655 947199 NP_417218.1 CDS ygbL NC_000913.3 2863593 2864231 D putative epimerase/aldolase; putative class II aldolase 2863593..2864231 Escherichia coli str. K-12 substr. MG1655 947197 NP_417219.1 CDS ygbM NC_000913.3 2864236 2865012 D putative hydroxypyruvate isomerase 2864236..2865012 Escherichia coli str. K-12 substr. MG1655 947207 NP_417220.1 CDS ygbN NC_000913.3 2865101 2866465 D putative transport protein; putative transporter 2865101..2866465 Escherichia coli str. K-12 substr. MG1655 947208 NP_417221.1 CDS rpoS NC_000913.3 2866559 2867551 R RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins; RNA polymerase, sigma S (sigma 38) factor complement(2866559..2867551) Escherichia coli str. K-12 substr. MG1655 947210 NP_417222.1 CDS nlpD NC_000913.3 2867614 2868753 R lipoprotein; activator of AmiC murein hydrolase activity, lipoprotein complement(2867614..2868753) Escherichia coli str. K-12 substr. MG1655 947011 NP_417223.1 CDS pcm NC_000913.3 2868893 2869519 R L-isoaspartate protein carboxylmethyltransferase type II complement(2868893..2869519) Escherichia coli str. K-12 substr. MG1655 944923 NP_417224.1 CDS umpG NC_000913.3 2869513 2870274 R survival protein; broad specificity 5'(3')-nucleotidase and polyphosphatase complement(2869513..2870274) Escherichia coli str. K-12 substr. MG1655 947211 NP_417225.1 CDS truD NC_000913.3 2870255 2871304 R putative hydrogenase subunit; tRNA(Glu) pseudouridine(13) synthase complement(2870255..2871304) Escherichia coli str. K-12 substr. MG1655 947214 NP_417226.1 CDS ispF NC_000913.3 2871301 2871780 R 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2871301..2871780) Escherichia coli str. K-12 substr. MG1655 945057 NP_417227.1 CDS ispD NC_000913.3 2871780 2872490 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase complement(2871780..2872490) Escherichia coli str. K-12 substr. MG1655 948269 NP_417228.1 CDS ftsB NC_000913.3 2872509 2872820 R cell division protein complement(2872509..2872820) Escherichia coli str. K-12 substr. MG1655 946033 NP_417229.1 CDS ygbE NC_000913.3 2873014 2873337 R putative cytochrome oxidase subunit; DUF3561 family inner membrane protein complement(2873014..2873337) Escherichia coli str. K-12 substr. MG1655 947268 NP_417230.1 CDS cysC NC_000913.3 2873387 2873992 R adenosine 5'-phosphosulfate kinase complement(2873387..2873992) Escherichia coli str. K-12 substr. MG1655 947221 NP_417231.1 CDS cysN NC_000913.3 2873992 2875419 R ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase; sulfate adenylyltransferase, subunit 1 complement(2873992..2875419) Escherichia coli str. K-12 substr. MG1655 947219 NP_417232.1 CDS cysD NC_000913.3 2875421 2876329 R ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2; sulfate adenylyltransferase, subunit 2 complement(2875421..2876329) Escherichia coli str. K-12 substr. MG1655 947217 NP_417233.1 CDS iap NC_000913.3 2876581 2877618 D aminopeptidase in alkaline phosphatase isozyme conversion 2876581..2877618 Escherichia coli str. K-12 substr. MG1655 947215 NP_417234.2 CDS ygbF NC_000913.3 2878569 2878853 R CRISPR adaptation ssRNA endonuclease complement(2878569..2878853) Escherichia coli str. K-12 substr. MG1655 947213 NP_417235.1 CDS ygbT NC_000913.3 2878855 2879772 R multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme complement(2878855..2879772) Escherichia coli str. K-12 substr. MG1655 947228 NP_417236.1 CDS casE NC_000913.3 2879788 2880387 R CRISPR RNA precursor cleavage enzyme; CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2879788..2880387) Escherichia coli str. K-12 substr. MG1655 947226 NP_417237.2 CDS casD NC_000913.3 2880374 2881048 R CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2880374..2881048) Escherichia coli str. K-12 substr. MG1655 947225 NP_417238.1 CDS casC NC_000913.3 2881051 2882142 R CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2881051..2882142) Escherichia coli str. K-12 substr. MG1655 947224 NP_417239.1 CDS casB NC_000913.3 2882155 2882637 R CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2882155..2882637) Escherichia coli str. K-12 substr. MG1655 947223 NP_417240.1 CDS casA NC_000913.3 2882630 2884138 R CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2882630..2884138) Escherichia coli str. K-12 substr. MG1655 947222 NP_417241.1 CDS ygcB NC_000913.3 2884553 2887219 R R-loop helicase-annealase Cas3 needed for Cascade anti-viral activity complement(2884553..2887219) Escherichia coli str. K-12 substr. MG1655 947229 NP_417242.1 CDS cysH NC_000913.3 2887578 2888312 R phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent complement(2887578..2888312) Escherichia coli str. K-12 substr. MG1655 947230 NP_417243.1 CDS cysI NC_000913.3 2888387 2890099 R sulfite reductase, alpha subunit; sulfite reductase, beta subunit, NAD(P)-binding, heme-binding complement(2888387..2890099) Escherichia coli str. K-12 substr. MG1655 947231 NP_417244.1 CDS cysJ NC_000913.3 2890099 2891898 R sulfite reductase (NADPH), flavoprotein beta subunit; sulfite reductase, alpha subunit, flavoprotein complement(2890099..2891898) Escherichia coli str. K-12 substr. MG1655 947239 NP_417245.1 CDS queD NC_000913.3 2892214 2892579 D putative 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 2892214..2892579 Escherichia coli str. K-12 substr. MG1655 945123 NP_417246.4 CDS ygcN NC_000913.3 2892657 2893928 D putative oxidoreductase 2892657..2893928 Escherichia coli str. K-12 substr. MG1655 946114 NP_417247.2 CDS ygcO NC_000913.3 2893919 2894179 D putative 4Fe-4S cluster-containing protein 2893919..2894179 Escherichia coli str. K-12 substr. MG1655 945120 NP_417248.1 CDS ygcP NC_000913.3 2894196 2894771 D putative anti-terminator regulatory protein; putative antiterminator regulatory protein 2894196..2894771 Escherichia coli str. K-12 substr. MG1655 947536 NP_417249.4 CDS ygcQ NC_000913.3 2894919 2895779 R putative flavoprotein complement(2894919..2895779) Escherichia coli str. K-12 substr. MG1655 946413 NP_417250.4 CDS ygcR NC_000913.3 2895776 2896555 R putative transport protein; putative flavoprotein complement(2895776..2896555) Escherichia coli str. K-12 substr. MG1655 947240 NP_417251.2 CDS ygcS NC_000913.3 2896533 2897870 R putative transport protein; putative transporter complement(2896533..2897870) Escherichia coli str. K-12 substr. MG1655 947238 YP_026183.1 CDS ygcU NC_000913.3 2897964 2899418 R putative FAD-containing dehydrogenase complement(2897964..2899418) Escherichia coli str. K-12 substr. MG1655 2847709 NP_417254.4 CDS ygcW NC_000913.3 2899488 2900273 R putative oxidoreductase; putative dehydrogenase complement(2899488..2900273) Escherichia coli str. K-12 substr. MG1655 947232 NP_417255.1 CDS yqcE NC_000913.3 2900592 2901869 D putative transport protein; MFS transporter family protein 2900592..2901869 Escherichia coli str. K-12 substr. MG1655 947248 NP_417256.1 CDS ygcE NC_000913.3 2901896 2903374 D putative kinase 2901896..2903374 Escherichia coli str. K-12 substr. MG1655 946193 NP_417257.1 CDS queE NC_000913.3 2904747 2905418 R 7-carboxy-7-deazaguanine synthase; queosine biosynthesis complement(2904747..2905418) Escherichia coli str. K-12 substr. MG1655 947527 YP_002791252.1 CDS yqcG NC_000913.3 2905557 2905697 D uncharacterized protein 2905557..2905697 Escherichia coli str. K-12 substr. MG1655 7751618 NP_417258.4 CDS ygcG NC_000913.3 2905711 2906583 D uncharacterized protein 2905711..2906583 Escherichia coli str. K-12 substr. MG1655 945247 NP_417259.1 CDS eno NC_000913.3 2906643 2907941 R enolase complement(2906643..2907941) Escherichia coli str. K-12 substr. MG1655 945032 NP_417260.1 CDS pyrG NC_000913.3 2908029 2909666 R CTP synthetase complement(2908029..2909666) Escherichia coli str. K-12 substr. MG1655 946116 NP_417261.1 CDS mazG NC_000913.3 2909894 2910685 R nucleoside triphosphate pyrophosphohydrolase complement(2909894..2910685) Escherichia coli str. K-12 substr. MG1655 947254 NP_417262.1 CDS mazF NC_000913.3 2910756 2911091 R probable growth inhibitor, PemK-like, autoregulated; mRNA interferase toxin, antitoxin is MazE complement(2910756..2911091) Escherichia coli str. K-12 substr. MG1655 947252 NP_417263.1 CDS mazE NC_000913.3 2911091 2911339 R suppressor of inhibitory function of ChpA, PemI-like, autoregulated; antitoxin of the ChpA-ChpR toxin-antitoxin system complement(2911091..2911339) Escherichia coli str. K-12 substr. MG1655 947245 NP_417264.1 CDS relA NC_000913.3 2911417 2913651 R (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor; (p)ppGpp synthetase I/GTP pyrophosphokinase complement(2911417..2913651) Escherichia coli str. K-12 substr. MG1655 947244 NP_417265.1 CDS rlmD NC_000913.3 2913699 2915000 R 23S rRNA m(5)U1939 methyltransferase, SAM-dependent complement(2913699..2915000) Escherichia coli str. K-12 substr. MG1655 947243 NP_417266.1 CDS barA NC_000913.3 2915057 2917813 D sensor-regulator, activates OmpR by phophorylation; hybrid sensory histidine kinase, in two-component regulatory system with UvrY 2915057..2917813 Escherichia coli str. K-12 substr. MG1655 947255 NP_417267.1 CDS gudD NC_000913.3 2918045 2919385 R (D)-glucarate dehydratase 1; (L)-idarate dehydratase; (L)-idarate epimerase; (D)-glucarate epimerase; (D)-glucarate dehydratase 1 complement(2918045..2919385) Escherichia coli str. K-12 substr. MG1655 947258 NP_417268.1 CDS gudX NC_000913.3 2919406 2920746 R putative (D)-glucarate dehydratase 2; glucarate dehydratase-related protein, substrate unknown complement(2919406..2920746) Escherichia coli str. K-12 substr. MG1655 947261 NP_417269.1 CDS gudP NC_000913.3 2920748 2922100 R putative D-glucarate permease (MFS family); putative D-glucarate transporter complement(2920748..2922100) Escherichia coli str. K-12 substr. MG1655 947265 NP_417270.1 CDS yqcA NC_000913.3 2922535 2922984 R short-chain flavodoxin, FMN-binding complement(2922535..2922984) Escherichia coli str. K-12 substr. MG1655 947151 NP_417271.1 CDS truC NC_000913.3 2923002 2923784 R tRNA(Ile1,Asp) pseudouridine(65) synthase complement(2923002..2923784) Escherichia coli str. K-12 substr. MG1655 947242 NP_417272.1 CDS yqcC NC_000913.3 2923784 2924113 R DUF446 family protein complement(2923784..2924113) Escherichia coli str. K-12 substr. MG1655 946027 NP_417273.1 CDS syd NC_000913.3 2924735 2925280 R interacts with secY; SecY-interacting protein complement(2924735..2925280) Escherichia coli str. K-12 substr. MG1655 947271 NP_417274.1 CDS queF NC_000913.3 2925348 2926196 D 7-cyano-7-deazaguanine reductase (NADPH-dependent) 2925348..2926196 Escherichia coli str. K-12 substr. MG1655 947270 NP_417275.1 CDS ygdH NC_000913.3 2926308 2927672 D UPF0717 family protein 2926308..2927672 Escherichia coli str. K-12 substr. MG1655 947266 NP_417276.1 CDS sdaC NC_000913.3 2928229 2929518 D probable serine transporter; putative serine transporter 2928229..2929518 Escherichia coli str. K-12 substr. MG1655 947264 NP_417277.1 CDS sdaB NC_000913.3 2929576 2930943 D L-serine dehydratase (deaminase), L-SD2; L-serine dehydratase 2 2929576..2930943 Escherichia coli str. K-12 substr. MG1655 947262 NP_417278.4 CDS ygdG NC_000913.3 2931055 2931810 D 5'-3' exonuclease; Ssb-binding protein, misidentified as ExoIX 2931055..2931810 Escherichia coli str. K-12 substr. MG1655 947256 NP_417279.2 CDS fucO NC_000913.3 2931865 2933013 R L-1,2-propanediol oxidoreductase complement(2931865..2933013) Escherichia coli str. K-12 substr. MG1655 947273 NP_417280.1 CDS fucA NC_000913.3 2933041 2933688 R L-fuculose-1-phosphate aldolase complement(2933041..2933688) Escherichia coli str. K-12 substr. MG1655 947282 NP_417281.1 CDS fucP NC_000913.3 2934235 2935551 D fucose permease; L-fucose transporter 2934235..2935551 Escherichia coli str. K-12 substr. MG1655 947487 NP_417282.1 CDS fucI NC_000913.3 2935584 2937359 D L-fucose isomerase 2935584..2937359 Escherichia coli str. K-12 substr. MG1655 946195 NP_417283.1 CDS fucK NC_000913.3 2937438 2938886 D L-fuculokinase 2937438..2938886 Escherichia coli str. K-12 substr. MG1655 946022 NP_417284.1 CDS fucU NC_000913.3 2938888 2939310 D protein of fucose operon; L-fucose mutarotase 2938888..2939310 Escherichia coli str. K-12 substr. MG1655 945842 NP_417285.1 CDS fucR NC_000913.3 2939368 2940099 D positive regulator of the fuc operon; l-fucose operon activator 2939368..2940099 Escherichia coli str. K-12 substr. MG1655 946905 NP_417286.1 CDS rlmM NC_000913.3 2940143 2941243 R 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent complement(2940143..2941243) Escherichia coli str. K-12 substr. MG1655 947283 NP_417287.1 CDS ygdD NC_000913.3 2941236 2941631 R UPF0382 family inner membrane protein complement(2941236..2941631) Escherichia coli str. K-12 substr. MG1655 947279 NP_417288.1 CDS gcvA NC_000913.3 2941650 2942567 R positive regulator of gcv operon; glycine cleavage system transcriptional activator; autorepressor complement(2941650..2942567) Escherichia coli str. K-12 substr. MG1655 947278 NP_417289.2 CDS ygdI NC_000913.3 2942918 2943145 R DUF903 family verified lipoprotein complement(2942918..2943145) Escherichia coli str. K-12 substr. MG1655 947276 NP_417290.1 CDS csdA NC_000913.3 2943337 2944542 D cysteine sulfinate desulfinase 2943337..2944542 Escherichia coli str. K-12 substr. MG1655 947275 NP_417291.1 CDS csdE NC_000913.3 2944542 2944985 D CsdA-binding activator; Fe-S protein 2944542..2944985 Escherichia coli str. K-12 substr. MG1655 947274 NP_417292.1 CDS tcdA NC_000913.3 2945036 2945842 R putative enzyme; tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA complement(2945036..2945842) Escherichia coli str. K-12 substr. MG1655 947291 NP_417293.1 CDS mltA NC_000913.3 2946081 2947178 R membrane-bound lytic murein transglycosylase A complement(2946081..2947178) Escherichia coli str. K-12 substr. MG1655 944964 NP_417294.4 CDS amiC NC_000913.3 2947757 2949010 R N-acetylmuramoyl-L-alanine amidase complement(2947757..2949010) Escherichia coli str. K-12 substr. MG1655 947293 NP_417295.1 CDS argA NC_000913.3 2949242 2950573 D N-acetylglutamate synthase; amino acid acetyltransferase; fused acetylglutamate kinase homolog (inactive)/amino acid N-acetyltransferase 2949242..2950573 Escherichia coli str. K-12 substr. MG1655 947289 NP_417296.1 CDS recD NC_000913.3 2950635 2952461 R DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), alpha chain complement(2950635..2952461) Escherichia coli str. K-12 substr. MG1655 947287 NP_417297.1 CDS recB NC_000913.3 2952461 2956003 R DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), beta subunit complement(2952461..2956003) Escherichia coli str. K-12 substr. MG1655 947286 NP_417298.1 CDS ptrA NC_000913.3 2955996 2958884 R protease III complement(2955996..2958884) Escherichia coli str. K-12 substr. MG1655 947284 NP_417299.1 CDS recC NC_000913.3 2959060 2962428 R DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), gamma chain complement(2959060..2962428) Escherichia coli str. K-12 substr. MG1655 947294 NP_417300.1 CDS ppdC NC_000913.3 2962441 2962764 R prepilin peptidase dependent protein C; putative prepilin peptidase-dependent protein complement(2962441..2962764) Escherichia coli str. K-12 substr. MG1655 945797 NP_417301.4 CDS ygdB NC_000913.3 2962749 2963156 R DUF2509 family protein complement(2962749..2963156) Escherichia coli str. K-12 substr. MG1655 944763 NP_417302.1 CDS ppdB NC_000913.3 2963153 2963716 R prepilin peptidase dependent protein B; putative prepilin peptidase-dependent protein complement(2963153..2963716) Escherichia coli str. K-12 substr. MG1655 948985 NP_417303.1 CDS ppdA NC_000913.3 2963707 2964177 R prepilin peptidase dependent protein A; putative prepilin peptidase-dependent protein complement(2963707..2964177) Escherichia coli str. K-12 substr. MG1655 945393 NP_417304.1 CDS thyA NC_000913.3 2964361 2965155 R thymidylate synthetase complement(2964361..2965155) Escherichia coli str. K-12 substr. MG1655 949035 NP_417305.1 CDS lgt NC_000913.3 2965162 2966037 R phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase complement(2965162..2966037) Escherichia coli str. K-12 substr. MG1655 947303 NP_417306.1 CDS ptsP NC_000913.3 2966188 2968434 R PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins); fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein complement(2966188..2968434) Escherichia coli str. K-12 substr. MG1655 947301 NP_417307.1 CDS rppH NC_000913.3 2968447 2968977 R putative invasion protein; RNA pyrophosphohydrolase complement(2968447..2968977) Escherichia coli str. K-12 substr. MG1655 947300 NP_417308.1 CDS mutH NC_000913.3 2969662 2970351 D methyl-directed mismatch repair; methyl-directed mismatch repair protein 2969662..2970351 Escherichia coli str. K-12 substr. MG1655 947299 NP_417309.1 CDS ygdQ NC_000913.3 2970420 2971133 D putative transport protein; UPF0053 family inner membrane protein 2970420..2971133 Escherichia coli str. K-12 substr. MG1655 947295 NP_417310.1 CDS ygdR NC_000913.3 2971271 2971489 D DUF903 family verified lipoprotein 2971271..2971489 Escherichia coli str. K-12 substr. MG1655 947304 NP_417311.1 CDS tas NC_000913.3 2971597 2972637 D putative NADP(H)-dependent aldo-keto reductase 2971597..2972637 Escherichia coli str. K-12 substr. MG1655 947306 NP_417312.1 CDS lplT NC_000913.3 2972669 2973862 R putative resistance proteins; lysophospholipid transporter complement(2972669..2973862) Escherichia coli str. K-12 substr. MG1655 947317 NP_417313.1 CDS aas NC_000913.3 2973855 2976014 R 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase; fused 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase complement(2973855..2976014) Escherichia coli str. K-12 substr. MG1655 947315 NP_417314.1 CDS galR NC_000913.3 2976599 2977630 D repressor of galETK operon; galactose-inducible d-galactose regulon transcriptional repressor; autorepressor 2976599..2977630 Escherichia coli str. K-12 substr. MG1655 947314 NP_417315.1 CDS lysA NC_000913.3 2977637 2978899 R diaminopimelate decarboxylase; diaminopimelate decarboxylase, PLP-binding complement(2977637..2978899) Escherichia coli str. K-12 substr. MG1655 947313 NP_417316.1 CDS lysR NC_000913.3 2979021 2979956 D positive regulator for lys; transcriptional activator of lysA; autorepressor 2979021..2979956 Escherichia coli str. K-12 substr. MG1655 947311 NP_417317.1 CDS ygeA NC_000913.3 2979943 2980635 R putative resistance proteins; Asp/Glu_racemase family protein complement(2979943..2980635) Escherichia coli str. K-12 substr. MG1655 947348 NP_417318.1 CDS araE NC_000913.3 2980764 2982182 R low-affinity L-arabinose transport system proton symport protein; arabinose transporter complement(2980764..2982182) Escherichia coli str. K-12 substr. MG1655 947341 NP_417319.1 CDS kduD NC_000913.3 2982497 2983258 R hexuronate dehydrogenase; hexuronate utilization in high osmolarity complement(2982497..2983258) Escherichia coli str. K-12 substr. MG1655 947323 NP_417320.1 CDS kduI NC_000913.3 2983288 2984124 R homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase; hexuronate isomerase; hexuronate utilization in high osmolarity complement(2983288..2984124) Escherichia coli str. K-12 substr. MG1655 947319 NP_417321.2 CDS yqeF NC_000913.3 2984411 2985592 R putative acyltransferase; short chain acyltransferase complement(2984411..2985592) Escherichia coli str. K-12 substr. MG1655 947324 NP_417322.1 CDS yqeG NC_000913.3 2985847 2987076 D putative transporter protein; putative transporter 2985847..2987076 Escherichia coli str. K-12 substr. MG1655 945028 NP_417323.2 CDS yqeH NC_000913.3 2987536 2988168 D putative LuxR family transcriptional regulator 2987536..2988168 Escherichia coli str. K-12 substr. MG1655 945263 NP_417324.1 CDS yqeI NC_000913.3 2988502 2989311 D putative sensory transducer; putative transcriptional regulator 2988502..2989311 Escherichia coli str. K-12 substr. MG1655 947327 NP_417325.4 CDS yqeJ NC_000913.3 2989304 2989786 D uncharacterized protein 2989304..2989786 Escherichia coli str. K-12 substr. MG1655 947328 YP_002791253.1 CDS yqeL NC_000913.3 2989819 2989899 R uncharacterized protein complement(2989819..2989899) Escherichia coli str. K-12 substr. MG1655 7751637 NP_417326.2 CDS yqeK NC_000913.3 2989935 2990360 R uncharacterized protein complement(2989935..2990360) Escherichia coli str. K-12 substr. MG1655 947329 b2850 CDS ygeF NC_000913.3 2990554 2991043 D pseudogene; join(2990554..2990949,2990948..2991043) Escherichia coli str. K-12 substr. MG1655 946823 NP_417328.1 CDS ygeG NC_000913.3 2991268 2991759 D SycD-like chaperone family TPR-repeat-containing protein 2991268..2991759 Escherichia coli str. K-12 substr. MG1655 946986 NP_417329.1 CDS ygeH NC_000913.3 2992094 2993470 D putative invasion protein; putative transcriptional regulator 2992094..2993470 Escherichia coli str. K-12 substr. MG1655 946265 NP_417330.1 CDS ygeI NC_000913.3 2993638 2993856 D uncharacterized protein 2993638..2993856 Escherichia coli str. K-12 substr. MG1655 947336 b2854 CDS pbl NC_000913.3 2993939 2994441 D pseudogene, peptidoglycan-binding enzyme family; join(2993939..2994382,2994382..2994441) Escherichia coli str. K-12 substr. MG1655 947338 b2856 CDS ygeK NC_000913.3 2994460 2995092 R pseudogene; putative 2-component transcriptional regulator; complement(2994460..2995092) Escherichia coli str. K-12 substr. MG1655 947332 b2858 CDS ygeN NC_000913.3 2995314 2996020 R pseudogene; complement(join(2995314..2995760,2995760..2996020)) Escherichia coli str. K-12 substr. MG1655 2847705 b2859 CDS ygeO NC_000913.3 2995962 2996360 R pseudogene, orgA homolog, part of T3SS PAI ETT2 remnant; complement(2995962..2996360) Escherichia coli str. K-12 substr. MG1655 947325 NP_417337.1 CDS insD1 NC_000913.3 2996372 2997277 R IS2 transposase TnpB complement(2996372..2997277) Escherichia coli str. K-12 substr. MG1655 947346 NP_417338.3 CDS insC1 NC_000913.3 2997235 2997600 R IS2 repressor TnpA complement(2997235..2997600) Escherichia coli str. K-12 substr. MG1655 947347 b2863 CDS ygeQ NC_000913.3 2997692 2998828 R pseudogene; complement(2997692..2998828) Escherichia coli str. K-12 substr. MG1655 947344 NP_417341.4 CDS ygeR NC_000913.3 2999136 2999891 R putative lipoprotein; LysM domain-containing M23 family putative peptidase; septation lipoprotein complement(2999136..2999891) Escherichia coli str. K-12 substr. MG1655 947352 NP_417342.1 CDS xdhA NC_000913.3 3000345 3002603 D xanthine dehydrogenase, molybdenum binding subunit 3000345..3002603 Escherichia coli str. K-12 substr. MG1655 947116 NP_417343.1 CDS xdhB NC_000913.3 3002614 3003492 D xanthine dehydrogenase, FAD-binding subunit 3002614..3003492 Escherichia coli str. K-12 substr. MG1655 947205 NP_417344.1 CDS xdhC NC_000913.3 3003489 3003968 D xanthine dehydrogenase, Fe-S binding subunit 3003489..3003968 Escherichia coli str. K-12 substr. MG1655 945148 NP_417345.1 CDS ygeV NC_000913.3 3004008 3005786 R putative transcriptional regulator; putative sigma-54-interacting transcriptional activator complement(3004008..3005786) Escherichia coli str. K-12 substr. MG1655 947320 YP_026185.1 CDS ygeW NC_000913.3 3006262 3007452 D putative carbamoyl transferase; putative carbamoyltransferase 3006262..3007452 Escherichia coli str. K-12 substr. MG1655 945826 NP_417347.1 CDS ygeX NC_000913.3 3007510 3008706 D putative diaminopropionate ammonia-lyase; 2,3-diaminopropionate ammonia lyase, PLP-dependent 3007510..3008706 Escherichia coli str. K-12 substr. MG1655 947012 NP_417348.1 CDS ygeY NC_000913.3 3008764 3009975 D putative deacetylase; putative peptidase 3008764..3009975 Escherichia coli str. K-12 substr. MG1655 947360 NP_417349.4 CDS hyuA NC_000913.3 3010028 3011413 D D-stereospecific phenylhydantoinase 3010028..3011413 Escherichia coli str. K-12 substr. MG1655 947359 NP_417350.1 CDS yqeA NC_000913.3 3011461 3012393 D putative kinase; putative amino acid kinase 3011461..3012393 Escherichia coli str. K-12 substr. MG1655 947358 NP_417351.1 CDS yqeB NC_000913.3 3012614 3014239 R putative synthases; XdhC-CoxI family protein with NAD(P)-binding Rossman fold complement(3012614..3014239) Escherichia coli str. K-12 substr. MG1655 947357 NP_417352.2 CDS yqeC NC_000913.3 3014287 3015057 R putative selenium-dependent hydroxylase accessory protein complement(3014287..3015057) Escherichia coli str. K-12 substr. MG1655 947350 NP_417353.1 CDS mocA NC_000913.3 3015160 3015738 D CTP:molybdopterin cytidylyltransferase 3015160..3015738 Escherichia coli str. K-12 substr. MG1655 947356 NP_417354.1 CDS ygfK NC_000913.3 3016060 3019158 D putative oxidoreductase, Fe-S subunit; putative Fe-S subunit oxidoreductase subunit 3016060..3019158 Escherichia coli str. K-12 substr. MG1655 949068 NP_417355.4 CDS ssnA NC_000913.3 3019161 3020489 D putative chlorohydrolase/aminohydrolase 3019161..3020489 Escherichia coli str. K-12 substr. MG1655 949072 NP_417356.1 CDS ygfM NC_000913.3 3020540 3021319 D putative oxidoreductase 3020540..3021319 Escherichia coli str. K-12 substr. MG1655 949071 NP_417357.1 CDS xdhD NC_000913.3 3021316 3024186 D putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding 3021316..3024186 Escherichia coli str. K-12 substr. MG1655 949079 NP_417358.2 CDS xanQ NC_000913.3 3024351 3025751 D xanthine permease 3024351..3025751 Escherichia coli str. K-12 substr. MG1655 949075 NP_417359.1 CDS guaD NC_000913.3 3025766 3027085 D guanine deaminase 3025766..3027085 Escherichia coli str. K-12 substr. MG1655 947366 YP_026186.1 CDS ygfQ NC_000913.3 3027121 3028488 D putative purine permease 3027121..3028488 Escherichia coli str. K-12 substr. MG1655 2847748 NP_417362.4 CDS ygfS NC_000913.3 3028524 3029012 R putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferredoxin-type oxidoreductase subunit complement(3028524..3029012) Escherichia coli str. K-12 substr. MG1655 949016 NP_417363.2 CDS ygfT NC_000913.3 3029012 3030931 R putative oxidoreductase, Fe-S subunit; putative oxidoreductase, Fe-S subunit/nucleotide-binding subunit complement(3029012..3030931) Escherichia coli str. K-12 substr. MG1655 949018 NP_417364.2 CDS uacT NC_000913.3 3031367 3032815 D putative permease; uric acid permease 3031367..3032815 Escherichia coli str. K-12 substr. MG1655 949017 YP_002791254.1 CDS yqfG NC_000913.3 3032817 3032942 D uncharacterized protein 3032817..3032942 Escherichia coli str. K-12 substr. MG1655 7751638 NP_417365.1 CDS idi NC_000913.3 3033065 3033613 D isopentenyl diphosphate isomerase 3033065..3033613 Escherichia coli str. K-12 substr. MG1655 949020 NP_417366.1 CDS lysS NC_000913.3 3033657 3035174 R lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA; lysine tRNA synthetase, constitutive complement(3033657..3035174) Escherichia coli str. K-12 substr. MG1655 947372 NP_417367.1 CDS prfB NC_000913.3 3035184 3036282 R an in-frame premature UGA termination codon is located within the prfB sequence, and a naturally occuring +1 frameshift is required for synthesis of RF-2; peptide chain release factor RF-2 complement(join(3035184..3036206,3036208..3036282)) Escherichia coli str. K-12 substr. MG1655 947369 NP_417368.1 CDS recJ NC_000913.3 3036373 3038106 R ssDNA exonuclease, 5' --> 3' specific; ssDNA exonuclease, 5' --> 3'-specific complement(3036373..3038106) Escherichia coli str. K-12 substr. MG1655 947367 NP_417369.1 CDS dsbC NC_000913.3 3038112 3038822 R protein disulfide isomerase II complement(3038112..3038822) Escherichia coli str. K-12 substr. MG1655 947363 NP_417370.1 CDS xerD NC_000913.3 3038847 3039743 R site-specific tyrosine recombinase complement(3038847..3039743) Escherichia coli str. K-12 substr. MG1655 947362 NP_417371.1 CDS fldB NC_000913.3 3039855 3040376 D flavodoxin 2 3039855..3040376 Escherichia coli str. K-12 substr. MG1655 947361 NP_417372.1 CDS cptA NC_000913.3 3040416 3040823 R toxin of CptAB toxin-antitoxin pair complement(3040416..3040823) Escherichia coli str. K-12 substr. MG1655 947379 NP_417373.1 CDS sdhE NC_000913.3 3040804 3041070 R flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair complement(3040804..3041070) Escherichia coli str. K-12 substr. MG1655 947382 NP_417374.1 CDS ygfZ NC_000913.3 3041313 3042293 D iron-sulfur cluster repair protein, plumbagin resistance 3041313..3042293 Escherichia coli str. K-12 substr. MG1655 947384 NP_417375.1 CDS yqfA NC_000913.3 3042489 3043148 R putative oxidoreductase; hemolysin III family HylIII inner membrane protein complement(3042489..3043148) Escherichia coli str. K-12 substr. MG1655 947381 NP_417376.1 CDS yqfB NC_000913.3 3043312 3043623 R UPF0267 family protein complement(3043312..3043623) Escherichia coli str. K-12 substr. MG1655 947380 NP_417377.1 CDS bglA NC_000913.3 3043662 3045101 D 6-phospho-beta-glucosidase A; cryptic; 6-phospho-beta-glucosidase A 3043662..3045101 Escherichia coli str. K-12 substr. MG1655 947378 NP_417378.1 CDS ygfF NC_000913.3 3045158 3045901 R putative oxidoreductase; putative NAD(P)-dependent oxidoreductase with NAD(P)-binding Rossmann-fold domain complement(3045158..3045901) Escherichia coli str. K-12 substr. MG1655 947373 NP_417379.1 CDS gcvP NC_000913.3 3046168 3049041 R glycine decarboxylase, P protein of glycine cleavage system; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex complement(3046168..3049041) Escherichia coli str. K-12 substr. MG1655 947394 NP_417380.1 CDS gcvH NC_000913.3 3049160 3049549 R in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactor; glycine cleavage complex lipoylprotein complement(3049160..3049549) Escherichia coli str. K-12 substr. MG1655 947393 NP_417381.1 CDS gcvT NC_000913.3 3049573 3050667 R aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system; aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex complement(3049573..3050667) Escherichia coli str. K-12 substr. MG1655 947390 NP_417382.1 CDS ubiI NC_000913.3 3051115 3052317 R 2-octaprenylphenol hydroxylase, FAD-dependent complement(3051115..3052317) Escherichia coli str. K-12 substr. MG1655 947389 NP_417383.1 CDS ubiH NC_000913.3 3052340 3053518 R 2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone; 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding complement(3052340..3053518) Escherichia coli str. K-12 substr. MG1655 947388 NP_417384.1 CDS pepP NC_000913.3 3053515 3054840 R proline aminopeptidase P II complement(3053515..3054840) Escherichia coli str. K-12 substr. MG1655 947385 NP_417385.4 CDS ygfB NC_000913.3 3054866 3055444 R UPF0149 family protein complement(3054866..3055444) Escherichia coli str. K-12 substr. MG1655 947400 NP_417386.1 CDS zapA NC_000913.3 3055612 3055941 D FtsZ stabilizer 3055612..3055941 Escherichia coli str. K-12 substr. MG1655 947404 NP_417387.3 CDS fau NC_000913.3 3056241 3056789 D putative ligase; 5-formyltetrahydrofolate cyclo-ligase family protein 3056241..3056789 Escherichia coli str. K-12 substr. MG1655 945167 YP_002791255.1 CDS ibsC NC_000913.3 3056890 3056949 R toxic membrane protein complement(3056890..3056949) Escherichia coli str. K-12 substr. MG1655 7751627 NP_417388.1 CDS serA NC_000913.3 3057178 3058410 R D-3-phosphoglycerate dehydrogenase complement(3057178..3058410) Escherichia coli str. K-12 substr. MG1655 945258 NP_417389.1 CDS rpiA NC_000913.3 3058666 3059325 R ribosephosphate isomerase, constitutive; ribose 5-phosphate isomerase, constitutive complement(3058666..3059325) Escherichia coli str. K-12 substr. MG1655 947407 b2915 CDS yqfE NC_000913.3 3059381 3059701 R pseudogene, LysR family; complement(3059381..3059701) Escherichia coli str. K-12 substr. MG1655 946707 NP_417391.1 CDS argP NC_000913.3 3059753 3060646 D replication initiation inhibitor, binds to 13-mers at oriC; transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 3059753..3060646 Escherichia coli str. K-12 substr. MG1655 944867 NP_417392.1 CDS scpA NC_000913.3 3060850 3062994 D methylmalonyl-CoA mutase (MCM); methylmalonyl-CoA mutase 3060850..3062994 Escherichia coli str. K-12 substr. MG1655 945576 NP_417393.1 CDS argK NC_000913.3 3062987 3063982 D membrane ATPase/protein kinase 3062987..3063982 Escherichia coli str. K-12 substr. MG1655 947412 NP_417394.4 CDS scpB NC_000913.3 3063993 3064778 D putative enzyme; methylmalonyl-CoA decarboxylase, biotin-independent 3063993..3064778 Escherichia coli str. K-12 substr. MG1655 947408 NP_417395.1 CDS scpC NC_000913.3 3064802 3066280 D putative coenzyme A transferase; propionyl-CoA:succinate CoA transferase 3064802..3066280 Escherichia coli str. K-12 substr. MG1655 947402 NP_417396.4 CDS ygfI NC_000913.3 3066277 3067173 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(3066277..3067173) Escherichia coli str. K-12 substr. MG1655 947401 NP_417397.1 CDS yggE NC_000913.3 3067340 3068080 R putative actin; oxidative stress defense protein complement(3067340..3068080) Escherichia coli str. K-12 substr. MG1655 947398 NP_417398.1 CDS argO NC_000913.3 3068173 3068808 R arginine transporter complement(3068173..3068808) Escherichia coli str. K-12 substr. MG1655 947418 NP_417399.1 CDS mscS NC_000913.3 3068947 3069807 R mechanosensitive channel protein, small conductance complement(3068947..3069807) Escherichia coli str. K-12 substr. MG1655 947416 NP_417400.1 CDS fbaA NC_000913.3 3070165 3071244 R fructose-bisphosphate aldolase, class II complement(3070165..3071244) Escherichia coli str. K-12 substr. MG1655 947415 NP_417401.1 CDS pgk NC_000913.3 3071459 3072622 R phosphoglycerate kinase complement(3071459..3072622) Escherichia coli str. K-12 substr. MG1655 947414 NP_417402.1 CDS epd NC_000913.3 3072672 3073691 R D-erythrose 4-phosphate dehydrogenase complement(3072672..3073691) Escherichia coli str. K-12 substr. MG1655 947413 NP_417403.1 CDS yggC NC_000913.3 3073976 3074689 R putative kinase; putative PanK family P-loop kinase complement(3073976..3074689) Escherichia coli str. K-12 substr. MG1655 947419 NP_417404.1 CDS yggD NC_000913.3 3074686 3075195 R putative transcriptional regulator; MtlR family putative transcriptional repressor complement(3074686..3075195) Escherichia coli str. K-12 substr. MG1655 946861 NP_417405.1 CDS yggF NC_000913.3 3075217 3076182 R fructose 1,6 bisphosphatase isozyme complement(3075217..3076182) Escherichia coli str. K-12 substr. MG1655 947410 YP_026187.1 CDS yggP NC_000913.3 3076179 3077456 R putative Zn-binding dehydrogenase complement(3076179..3077456) Escherichia coli str. K-12 substr. MG1655 2847686 NP_417408.1 CDS cmtA NC_000913.3 3077471 3078859 R PTS system, mannitol-specific enzyme II component, cryptic; putative mannitol-specific PTS enzymes: IIB component/IIC component complement(3077471..3078859) Escherichia coli str. K-12 substr. MG1655 945256 NP_417409.1 CDS cmtB NC_000913.3 3078887 3079330 R PTS system, mannitol-specific enzyme II component, cryptic; putative mannitol-specific enzyme IIA component of PTS complement(3078887..3079330) Escherichia coli str. K-12 substr. MG1655 945125 YP_026188.1 CDS tktA NC_000913.3 3079644 3081635 R transketolase 1 isozyme; transketolase 1, thiamine triphosphate-binding complement(3079644..3081635) Escherichia coli str. K-12 substr. MG1655 947420 NP_417411.2 CDS loiP NC_000913.3 3081913 3082671 D Phe-Phe periplasmic metalloprotease, OM lipoprotein; low salt-inducible; heat shock protein that binds Era 3081913..3082671 Escherichia coli str. K-12 substr. MG1655 945173 NP_417412.1 CDS speB NC_000913.3 3082877 3083797 R agmatinase complement(3082877..3083797) Escherichia coli str. K-12 substr. MG1655 947715 NP_417413.1 CDS speA NC_000913.3 3083935 3085911 R biosynthetic arginine decarboxylase; biosynthetic arginine decarboxylase, PLP-binding complement(3083935..3085911) Escherichia coli str. K-12 substr. MG1655 947432 NP_417414.2 CDS yqgB NC_000913.3 3085920 3086051 R uncharacterized protein complement(3085920..3086051) Escherichia coli str. K-12 substr. MG1655 947433 NP_417415.1 CDS yqgC NC_000913.3 3086187 3086402 D uncharacterized protein 3086187..3086402 Escherichia coli str. K-12 substr. MG1655 945052 NP_417417.1 CDS metK NC_000913.3 3086706 3087860 D methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes; S-adenosylmethionine synthetase 3086706..3087860 Escherichia coli str. K-12 substr. MG1655 945389 NP_417418.1 CDS galP NC_000913.3 3088284 3089678 D galactose-proton symport of transport system; D-galactose transporter 3088284..3089678 Escherichia coli str. K-12 substr. MG1655 947434 NP_417419.1 CDS yggI NC_000913.3 3089755 3090252 D Zn-dependent metalloprotease-related protein 3089755..3090252 Escherichia coli str. K-12 substr. MG1655 947443 NP_417420.1 CDS endA NC_000913.3 3090347 3091054 D DNA-specific endonuclease I 3090347..3091054 Escherichia coli str. K-12 substr. MG1655 949092 NP_417421.4 CDS rsmE NC_000913.3 3091134 3091865 D 16S rRNA m(3)U1498 methyltransferase, SAM-dependent 3091134..3091865 Escherichia coli str. K-12 substr. MG1655 945816 NP_417422.1 CDS gshB NC_000913.3 3091878 3092828 D glutathione synthetase 3091878..3092828 Escherichia coli str. K-12 substr. MG1655 947445 NP_417423.4 CDS yqgE NC_000913.3 3092937 3093500 D uncharacterized protein 3092937..3093500 Escherichia coli str. K-12 substr. MG1655 947442 NP_417424.1 CDS yqgF NC_000913.3 3093500 3093916 D putative Holliday junction resolvase 3093500..3093916 Escherichia coli str. K-12 substr. MG1655 947439 NP_417425.2 CDS yggR NC_000913.3 3094100 3095080 R putative protein transport; putative PilT family AAA+ ATPase complement(3094100..3095080) Escherichia coli str. K-12 substr. MG1655 947430 NP_417426.1 CDS yggS NC_000913.3 3095098 3095802 D UPF0001 family protein, PLP-binding 3095098..3095802 Escherichia coli str. K-12 substr. MG1655 947423 NP_417427.1 CDS yggT NC_000913.3 3095820 3096386 D conserved hypothetical integral membrane protein; putative inner membrane protein; compensates for loss in K+ uptake 3095820..3096386 Escherichia coli str. K-12 substr. MG1655 947421 NP_417428.2 CDS yggU NC_000913.3 3096383 3096673 D UPF0235 family protein 3096383..3096673 Escherichia coli str. K-12 substr. MG1655 947424 NP_417429.1 CDS rdgB NC_000913.3 3096681 3097274 D putative ribosomal protein; dITP/XTP pyrophosphatase 3096681..3097274 Escherichia coli str. K-12 substr. MG1655 947429 NP_417430.1 CDS yggW NC_000913.3 3097267 3098403 D putative oxidase; HemN family putative oxidoreductase 3097267..3098403 Escherichia coli str. K-12 substr. MG1655 947446 NP_417431.1 CDS yggM NC_000913.3 3098558 3099565 R putative alpha helix chain; DUF1202 family putative secreted protein complement(3098558..3099565) Escherichia coli str. K-12 substr. MG1655 947455 NP_417432.1 CDS ansB NC_000913.3 3099682 3100728 R periplasmic L-asparaginase 2 complement(3099682..3100728) Escherichia coli str. K-12 substr. MG1655 947454 NP_417433.1 CDS yggN NC_000913.3 3100904 3101623 R DUF2884 family putative periplasmic protein complement(3100904..3101623) Escherichia coli str. K-12 substr. MG1655 947453 NP_417434.4 CDS yggL NC_000913.3 3101807 3102133 R DUF469 family protein complement(3101807..3102133) Escherichia coli str. K-12 substr. MG1655 947449 NP_417435.1 CDS trmI NC_000913.3 3102133 3102852 R tRNA m(7)G46 methyltransferase, SAM-dependent complement(3102133..3102852) Escherichia coli str. K-12 substr. MG1655 947448 NP_417436.1 CDS mutY NC_000913.3 3103013 3104065 D adenine glycosylase; G.C --> T.A transversions; adenine DNA glycosylase 3103013..3104065 Escherichia coli str. K-12 substr. MG1655 947447 NP_417437.1 CDS yggX NC_000913.3 3104093 3104368 D protein that protects iron-sulfur proteins against oxidative damage 3104093..3104368 Escherichia coli str. K-12 substr. MG1655 947461 NP_417438.2 CDS mltC NC_000913.3 3104433 3105512 D membrane-bound lytic murein transglycosylase C 3104433..3105512 Escherichia coli str. K-12 substr. MG1655 945428 NP_417439.4 CDS nupG NC_000913.3 3105714 3106970 D transport of nucleosides, permease protein; nucleoside transporter 3105714..3106970 Escherichia coli str. K-12 substr. MG1655 946282 NP_417440.4 CDS speC NC_000913.3 3107020 3109155 R ornithine decarboxylase isozyme; ornithine decarboxylase, constitutive complement(3107020..3109155) Escherichia coli str. K-12 substr. MG1655 947457 NP_417441.1 CDS yqgA NC_000913.3 3109553 3110260 D putative transport protein; DUF554 family putative inner membrane protein 3109553..3110260 Escherichia coli str. K-12 substr. MG1655 947462 NP_417442.1 CDS yghD NC_000913.3 3110590 3111126 R putative secretion pathway protein; putative membrane-anchored secretion pathway M-type protein complement(3110590..3111126) Escherichia coli str. K-12 substr. MG1655 947025 b2969 CDS yghE NC_000913.3 3111128 3112090 R pseudogene, secretion pathway protein, L-type protein homology; putative general secretion pathway for protein export (GSP); complement(3111128..3112090) Escherichia coli str. K-12 substr. MG1655 945897 b2970 CDS yghF NC_000913.3 3112093 3112941 R pseudogene, secretion pathway protein, C-type protein homology;putative transport; Not classified; putative general secretion pathway for protein export (GSP); complement(3112093..3112941) Escherichia coli str. K-12 substr. MG1655 947469 NP_417445.1 CDS yghG NC_000913.3 3113067 3113477 R secretin (GspDbeta) OM localization lipoprotein pilotin complement(3113067..3113477) Escherichia coli str. K-12 substr. MG1655 947470 NP_417446.4 CDS pppA NC_000913.3 3113543 3114352 R bifunctional prepilin leader peptidase/ methylase complement(3113543..3114352) Escherichia coli str. K-12 substr. MG1655 947467 YP_026189.1 CDS yghJ NC_000913.3 3114550 3119112 R putative lipoprotein; DUF4092 family putative lipoprotein peptidase complement(3114550..3119112) Escherichia coli str. K-12 substr. MG1655 2847716 NP_417449.1 CDS glcA NC_000913.3 3119597 3121279 R putative permease; glycolate transporter complement(3119597..3121279) Escherichia coli str. K-12 substr. MG1655 947259 NP_417450.1 CDS glcB NC_000913.3 3121634 3123805 R malate synthase G complement(3121634..3123805) Escherichia coli str. K-12 substr. MG1655 948857 NP_417451.1 CDS glcG NC_000913.3 3123827 3124231 R DUF336 family protein complement(3123827..3124231) Escherichia coli str. K-12 substr. MG1655 947473 YP_026190.1 CDS glcF NC_000913.3 3124236 3125459 R glycolate oxidase 4Fe-4S iron-sulfur cluster subunit complement(3124236..3125459) Escherichia coli str. K-12 substr. MG1655 2847717 YP_026191.1 CDS glcE NC_000913.3 3125470 3126522 R glycolate oxidase iron-sulfur subunit; glycolate oxidase FAD binding subunit complement(3125470..3126522) Escherichia coli str. K-12 substr. MG1655 2847718 NP_417453.1 CDS glcD NC_000913.3 3126522 3128021 R glycolate oxidase subunit D; glycolate oxidase subunit, FAD-linked complement(3126522..3128021) Escherichia coli str. K-12 substr. MG1655 947353 NP_417454.1 CDS glcC NC_000913.3 3128272 3129036 D transcriptional activator for glc operon; glycolate-inducible glc operon transcriptional repressor; autorepressor 3128272..3129036 Escherichia coli str. K-12 substr. MG1655 947466 b2981 CDS yghO NC_000913.3 3129043 3130143 R pseudogene, DNA-binding transcriptional regulator homology; complement(3129043..3130143) Escherichia coli str. K-12 substr. MG1655 947701 NP_417456.1 CDS insH1 NC_000913.3 3130178 3131194 D IS5 transposase and trans-activator 3130178..3131194 Escherichia coli str. K-12 substr. MG1655 947516 YP_026192.1 CDS yghQ NC_000913.3 3131341 3132408 R putative inner membrane polysaccharide flippase complement(3131341..3132408) Escherichia coli str. K-12 substr. MG1655 947716 NP_417458.1 CDS yghR NC_000913.3 3132454 3133212 R putative ATP-binding protein complement(3132454..3133212) Escherichia coli str. K-12 substr. MG1655 947310 NP_417459.1 CDS yghS NC_000913.3 3133244 3133957 R putative ATP-binding protein complement(3133244..3133957) Escherichia coli str. K-12 substr. MG1655 947476 NP_417460.1 CDS yghT NC_000913.3 3134131 3134823 D putative ATP-binding protein 3134131..3134823 Escherichia coli str. K-12 substr. MG1655 947477 NP_417461.1 CDS pitB NC_000913.3 3134872 3136371 R low-affinity phosphate transport; phosphate transporter complement(3134872..3136371) Escherichia coli str. K-12 substr. MG1655 947475 NP_417462.1 CDS gss NC_000913.3 3136663 3138522 R glutathionylspermidine synthetase/amidase; fused glutathionylspermidine amidase/glutathionylspermidine synthetase complement(3136663..3138522) Escherichia coli str. K-12 substr. MG1655 947474 NP_417463.4 CDS yghU NC_000913.3 3138727 3139593 D putative S-transferase 3138727..3139593 Escherichia coli str. K-12 substr. MG1655 947472 NP_417464.1 CDS hybG NC_000913.3 3139716 3139964 R hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2; hydrogenase 2 accessory protein complement(3139716..3139964) Escherichia coli str. K-12 substr. MG1655 948020 NP_417465.1 CDS hybF NC_000913.3 3139977 3140318 R may modulate levels of hydrogenease-2; protein involved with the maturation of hydrogenases 1 and 2 complement(3139977..3140318) Escherichia coli str. K-12 substr. MG1655 948004 NP_417466.1 CDS hybE NC_000913.3 3140311 3140799 R member of hyb operon; hydrogenase 2-specific chaperone complement(3140311..3140799) Escherichia coli str. K-12 substr. MG1655 947483 NP_417467.1 CDS hybD NC_000913.3 3140792 3141286 R probable processing element for hydrogenase-2; maturation protease for hydrogenase 2 complement(3140792..3141286) Escherichia coli str. K-12 substr. MG1655 948982 NP_417468.1 CDS hybC NC_000913.3 3141286 3142989 R probable large subunit, hydrogenase-2; hydrogenase 2, large subunit complement(3141286..3142989) Escherichia coli str. K-12 substr. MG1655 945182 NP_417469.1 CDS hybB NC_000913.3 3142986 3144164 R probable cytochrome Ni/Fe component of hydrogenase-2; putative hydrogenase 2 cytochrome b type component complement(3142986..3144164) Escherichia coli str. K-12 substr. MG1655 948615 NP_417470.1 CDS hybA NC_000913.3 3144154 3145140 R hydrogenase-2 small subunit; hydrogenase 2 4Fe-4S ferredoxin-type component complement(3144154..3145140) Escherichia coli str. K-12 substr. MG1655 944842 NP_417471.1 CDS hybO NC_000913.3 3145143 3146261 R hydrogenase 2, small subunit complement(3145143..3146261) Escherichia coli str. K-12 substr. MG1655 945902 NP_417472.1 CDS yghW NC_000913.3 3146450 3146737 R DUF2623 family protein complement(3146450..3146737) Escherichia coli str. K-12 substr. MG1655 947485 b4658 CDS yghX NC_000913.3 3146856 3147691 R pseudogene, dienlactone hydrolase family; complement(join(3146856..3147272,3147272..3147691)) Escherichia coli str. K-12 substr. MG1655 2847694 NP_417474.1 CDS gpr NC_000913.3 3147897 3148937 D putative reductase; L-glyceraldehyde 3-phosphate reductase 3147897..3148937 Escherichia coli str. K-12 substr. MG1655 947480 NP_417475.1 CDS yqhA NC_000913.3 3148977 3149471 R UPF0114 family putative inner membrane protein complement(3148977..3149471) Escherichia coli str. K-12 substr. MG1655 947479 NP_417476.1 CDS yghA NC_000913.3 3149662 3150546 D putative oxidoreductase 3149662..3150546 Escherichia coli str. K-12 substr. MG1655 947478 NP_417478.1 CDS exbD NC_000913.3 3150818 3151243 R uptake of enterochelin; tonB-dependent uptake of B colicins; membrane spanning protein in TonB-ExbB-ExbD complex complement(3150818..3151243) Escherichia coli str. K-12 substr. MG1655 946345 NP_417479.1 CDS exbB NC_000913.3 3151250 3151984 R uptake of enterochelin; tonB-dependent uptake of B colicins; membrane spanning protein in TonB-ExbB-ExbD complex complement(3151250..3151984) Escherichia coli str. K-12 substr. MG1655 945420 NP_417481.1 CDS metC NC_000913.3 3152236 3153423 D cystathionine beta-lyase (beta-cystathionase); cystathionine beta-lyase, PLP-dependent 3152236..3153423 Escherichia coli str. K-12 substr. MG1655 946240 NP_417482.1 CDS yghB NC_000913.3 3153563 3154222 D general envelope maintenance protein; DedA family inner membrane protein 3153563..3154222 Escherichia coli str. K-12 substr. MG1655 947490 NP_417483.2 CDS yqhC NC_000913.3 3154262 3155218 R putative ARAC-type regulatory protein; transcriptional activator of yqhD complement(3154262..3155218) Escherichia coli str. K-12 substr. MG1655 947491 NP_417484.1 CDS yqhD NC_000913.3 3155355 3156518 D putative oxidoreductase; aldehyde reductase, NADPH-dependent 3155355..3156518 Escherichia coli str. K-12 substr. MG1655 947493 NP_417485.4 CDS dkgA NC_000913.3 3156623 3157450 D 2,5-diketo-D-gluconate reductase A 3156623..3157450 Escherichia coli str. K-12 substr. MG1655 947495 YP_026195.1 CDS yqhG NC_000913.3 3157650 3158576 D DUF3828 family putative periplasmic protein 3157650..3158576 Escherichia coli str. K-12 substr. MG1655 945919 NP_417487.1 CDS yqhH NC_000913.3 3158627 3158884 D outer membrane lipoprotein, Lpp paralog 3158627..3158884 Escherichia coli str. K-12 substr. MG1655 946832 YP_026196.1 CDS ygiQ NC_000913.3 3158927 3161146 R Radical SAM superfamily protein complement(3158927..3161146) Escherichia coli str. K-12 substr. MG1655 948963 NP_417489.1 CDS ftsP NC_000913.3 3161257 3162669 R suppressor of ftsI; septal ring component that protects the divisome from stress; multicopy suppressor of ftsI(Ts) complement(3161257..3162669) Escherichia coli str. K-12 substr. MG1655 944982 NP_417490.1 CDS plsC NC_000913.3 3162744 3163481 R 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(3162744..3163481) Escherichia coli str. K-12 substr. MG1655 947496 NP_417491.1 CDS parC NC_000913.3 3163715 3165973 R DNA topoisomerase IV subunit A; DNA topoisomerase IV, subunit A complement(3163715..3165973) Escherichia coli str. K-12 substr. MG1655 947499 NP_417492.1 CDS ygiS NC_000913.3 3166111 3167718 R putative transport periplasmic protein; putative inner membrane ABC superfamily transporter permease complement(3166111..3167718) Escherichia coli str. K-12 substr. MG1655 947140 NP_417493.1 CDS mqsA NC_000913.3 3167851 3168246 R antitoxin for MqsR toxin; transcriptional repressor complement(3167851..3168246) Escherichia coli str. K-12 substr. MG1655 945814 NP_417494.1 CDS mqsR NC_000913.3 3168248 3168544 R GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system; biofilm/motility regulator; anti-repressor complement(3168248..3168544) Escherichia coli str. K-12 substr. MG1655 947500 YP_026197.1 CDS ygiV NC_000913.3 3168749 3169231 R transcriptional repressor for mcbR biofilm gene complement(3168749..3169231) Escherichia coli str. K-12 substr. MG1655 945805 NP_417496.1 CDS ygiW NC_000913.3 3169284 3169676 R hydrogen peroxide and cadmium resistance periplasmic protein; stress-induced OB-fold protein complement(3169284..3169676) Escherichia coli str. K-12 substr. MG1655 946051 NP_417497.1 CDS qseB NC_000913.3 3169828 3170487 D putative 2-component transcriptional regulator; quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 3169828..3170487 Escherichia coli str. K-12 substr. MG1655 945369 NP_417498.1 CDS qseC NC_000913.3 3170484 3171833 D putative 2-component sensor protein; quorum sensing sensory histidine kinase in two-component regulatory system with QseB 3170484..3171833 Escherichia coli str. K-12 substr. MG1655 947174 NP_417499.1 CDS ygiZ NC_000913.3 3171879 3172211 R inner membrane protein complement(3171879..3172211) Escherichia coli str. K-12 substr. MG1655 946450 NP_417500.1 CDS mdaB NC_000913.3 3172530 3173111 D modulator of drug activity B; NADPH quinone reductase 3172530..3173111 Escherichia coli str. K-12 substr. MG1655 947512 NP_417501.1 CDS ygiN NC_000913.3 3173142 3173456 D quinol monooxygenase 3173142..3173456 Escherichia coli str. K-12 substr. MG1655 947506 NP_417502.1 CDS parE NC_000913.3 3173504 3175396 R DNA topoisomerase IV subunit B; DNA topoisomerase IV, subunit B complement(3173504..3175396) Escherichia coli str. K-12 substr. MG1655 947501 NP_417503.1 CDS yqiA NC_000913.3 3175425 3176006 R acyl CoA esterase complement(3175425..3176006) Escherichia coli str. K-12 substr. MG1655 947488 NP_417504.1 CDS cpdA NC_000913.3 3176006 3176833 R 3',5' cAMP phosphodiesterase complement(3176006..3176833) Escherichia coli str. K-12 substr. MG1655 947515 NP_417505.1 CDS yqiB NC_000913.3 3176858 3177280 R putative enzyme; DUF1249 protein YqiB complement(3176858..3177280) Escherichia coli str. K-12 substr. MG1655 947518 NP_417506.1 CDS nudF NC_000913.3 3177281 3177910 R ADP-ribose pyrophosphatase complement(3177281..3177910) Escherichia coli str. K-12 substr. MG1655 947519 NP_417507.2 CDS tolC NC_000913.3 3178115 3179596 D outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes; transport channel 3178115..3179596 Escherichia coli str. K-12 substr. MG1655 947521 NP_417509.3 CDS ygiB NC_000913.3 3179744 3180415 D DUF1190 family protein 3179744..3180415 Escherichia coli str. K-12 substr. MG1655 945086 NP_417510.1 CDS ygiC NC_000913.3 3180421 3181581 D putative synthetase/amidase; ATP-Grasp family ATPase 3180421..3181581 Escherichia coli str. K-12 substr. MG1655 947249 NP_417511.2 CDS ygiD NC_000913.3 3181619 3182407 R 4,5- DOPA-extradiol-dioxygenase complement(3181619..3182407) Escherichia coli str. K-12 substr. MG1655 946447 NP_417512.1 CDS zupT NC_000913.3 3182550 3183323 D zinc transporter 3182550..3183323 Escherichia coli str. K-12 substr. MG1655 947035 NP_417513.1 CDS ribB NC_000913.3 3183813 3184466 R 3,4 dihydroxy-2-butanone-4-phosphate synthase; 3,4-dihydroxy-2-butanone-4-phosphate synthase complement(3183813..3184466) Escherichia coli str. K-12 substr. MG1655 947526 NP_417514.4 CDS yqiC NC_000913.3 3184840 3185130 D BMFP family putative fusogenic protein 3184840..3185130 Escherichia coli str. K-12 substr. MG1655 947524 NP_417515.1 CDS ygiL NC_000913.3 3185414 3185965 D putative fimbrial-like protein; putative fimbrial-like adhesin protein 3185414..3185965 Escherichia coli str. K-12 substr. MG1655 947522 b3046 CDS yqiG NC_000913.3 3186061 3189865 D pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein; join(3186061..3186089,3187421..3189865) Escherichia coli str. K-12 substr. MG1655 947529 NP_417516.3 CDS insC1 NC_000913.3 3186187 3186552 D IS2 repressor TnpA 3186187..3186552 Escherichia coli str. K-12 substr. MG1655 947520 NP_417517.1 CDS insD1 NC_000913.3 3186510 3187415 D IS2 transposase TnpB 3186510..3187415 Escherichia coli str. K-12 substr. MG1655 947517 NP_417519.4 CDS yqiH NC_000913.3 3189881 3190630 D putative membrane protein; putative periplasmic pilin chaperone 3189881..3190630 Escherichia coli str. K-12 substr. MG1655 947531 NP_417520.1 CDS yqiI NC_000913.3 3190632 3191696 D fimbrial protein 3190632..3191696 Escherichia coli str. K-12 substr. MG1655 947535 NP_417521.1 CDS glgS NC_000913.3 3191739 3191939 R glycogen biosynthesis, rpoS dependent; motility and biofilm regulator complement(3191739..3191939) Escherichia coli str. K-12 substr. MG1655 947533 NP_417522.1 CDS yqiJ NC_000913.3 3192208 3192837 D putative oxidoreductase; DUF1449 family inner membrane protein 3192208..3192837 Escherichia coli str. K-12 substr. MG1655 947530 NP_417523.1 CDS yqiK NC_000913.3 3192864 3194525 D putative membrane protein; PHB family membrane protein, function unknown 3192864..3194525 Escherichia coli str. K-12 substr. MG1655 947537 YP_002791256.1 CDS ibsD NC_000913.3 3194766 3194825 D toxic membrane protein 3194766..3194825 Escherichia coli str. K-12 substr. MG1655 7751628 YP_002791257.1 CDS ibsE NC_000913.3 3195141 3195200 D toxic membrane protein 3195141..3195200 Escherichia coli str. K-12 substr. MG1655 7751629 NP_417524.1 CDS hldE NC_000913.3 3195320 3196753 R fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(3195320..3196753) Escherichia coli str. K-12 substr. MG1655 947548 NP_417525.1 CDS glnE NC_000913.3 3196801 3199641 R adenylylating enzyme for glutamine synthetase; fused deadenylyltransferase/adenylyltransferase for glutamine synthetase complement(3196801..3199641) Escherichia coli str. K-12 substr. MG1655 947552 NP_417526.1 CDS ygiF NC_000913.3 3199664 3200965 R inorganic triphosphatase complement(3199664..3200965) Escherichia coli str. K-12 substr. MG1655 947554 NP_417527.1 CDS ygiM NC_000913.3 3201207 3201827 D SH3 domain protein 3201207..3201827 Escherichia coli str. K-12 substr. MG1655 947555 NP_417528.1 CDS cca NC_000913.3 3201891 3203129 D tRNA nucleotidyl transferase; fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase 3201891..3203129 Escherichia coli str. K-12 substr. MG1655 947553 NP_417529.1 CDS bacA NC_000913.3 3203310 3204131 R bacitracin resistance; possibly phosphorylates undecaprenol; undecaprenyl pyrophosphate phosphatase complement(3203310..3204131) Escherichia coli str. K-12 substr. MG1655 947551 NP_417530.2 CDS folB NC_000913.3 3204221 3204589 R putative kinase; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase complement(3204221..3204589) Escherichia coli str. K-12 substr. MG1655 947544 NP_417531.1 CDS plsY NC_000913.3 3204694 3205311 D putative glycerol-3-phosphate acyltransferase 3204694..3205311 Escherichia coli str. K-12 substr. MG1655 947561 NP_417532.1 CDS ttdR NC_000913.3 3205324 3206256 R putative transcriptional regulator LYSR-type; transcriptional activator of ttdABT complement(3205324..3206256) Escherichia coli str. K-12 substr. MG1655 947562 NP_417533.1 CDS ttdA NC_000913.3 3206463 3207374 D L-tartrate dehydratase, subunit A; L-tartrate dehydratase, alpha subunit 3206463..3207374 Escherichia coli str. K-12 substr. MG1655 947565 NP_417534.1 CDS ttdB NC_000913.3 3207371 3207976 D L-tartrate dehydratase, subunit B; L-tartrate dehydratase, beta subunit 3207371..3207976 Escherichia coli str. K-12 substr. MG1655 947568 NP_417535.1 CDS ttdT NC_000913.3 3208024 3209487 D L-tartrate/succinate antiporte 3208024..3209487 Escherichia coli str. K-12 substr. MG1655 947576 NP_417536.1 CDS tsaD NC_000913.3 3209530 3210543 R putative O-sialoglycoprotein endopeptidase; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein complement(3209530..3210543) Escherichia coli str. K-12 substr. MG1655 947578 NP_417537.1 CDS rpsU NC_000913.3 3210781 3210996 D 30S ribosomal subunit protein S21 3210781..3210996 Escherichia coli str. K-12 substr. MG1655 947577 NP_417538.1 CDS dnaG NC_000913.3 3211107 3212852 D DNA biosynthesis; DNA primase; DNA primase 3211107..3212852 Escherichia coli str. K-12 substr. MG1655 947570 NP_417539.1 CDS rpoD NC_000913.3 3213047 3214888 D RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures; RNA polymerase, sigma 70 (sigma D) factor 3213047..3214888 Escherichia coli str. K-12 substr. MG1655 947567 NP_417540.1 CDS mug NC_000913.3 3214967 3215473 R G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase complement(3214967..3215473) Escherichia coli str. K-12 substr. MG1655 947560 NP_417541.1 CDS yqjH NC_000913.3 3215727 3216491 R putative siderophore interacting protein complement(3215727..3216491) Escherichia coli str. K-12 substr. MG1655 947582 NP_417542.1 CDS yqjI NC_000913.3 3216779 3217402 D PadR family putative transcriptional regulator 3216779..3217402 Escherichia coli str. K-12 substr. MG1655 947584 NP_417543.1 CDS aer NC_000913.3 3217556 3219076 R aerotaxis sensor receptor, flavoprotein; fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component complement(3217556..3219076) Escherichia coli str. K-12 substr. MG1655 945301 NP_417544.5 CDS patA NC_000913.3 3219494 3220873 D probable ornithine aminotransferase; putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent 3219494..3220873 Escherichia coli str. K-12 substr. MG1655 947120 NP_417545.1 CDS ygjH NC_000913.3 3220915 3221247 R putative tRNA synthetase; putative tRNA binding protein; putative tRNA corner chaperone complement(3220915..3221247) Escherichia coli str. K-12 substr. MG1655 946251 NP_417546.1 CDS ebgR NC_000913.3 3221466 3222449 D regulator of ebg operon; transcriptional repressor 3221466..3222449 Escherichia coli str. K-12 substr. MG1655 947586 YP_026199.1 CDS ebgA NC_000913.3 3222633 3225725 D evolved beta-D-galactosidase, alpha subunit; cryptic gene; evolved beta-D-galactosidase, alpha subunit 3222633..3225725 Escherichia coli str. K-12 substr. MG1655 947583 NP_417548.1 CDS ebgC NC_000913.3 3225722 3226171 D evolved beta-D-galactosidase, beta subunit; cryptic gene; evolved beta-D-galactosidase, beta subunit; cupin superfamily 3225722..3226171 Escherichia coli str. K-12 substr. MG1655 947581 YP_026200.1 CDS ygjI NC_000913.3 3226234 3227667 D putative oxidoreductase; putative transporter 3226234..3227667 Escherichia coli str. K-12 substr. MG1655 947579 NP_417550.1 CDS ygjJ NC_000913.3 3227801 3228871 D putative periplasmic protein 3227801..3228871 Escherichia coli str. K-12 substr. MG1655 947597 NP_417551.1 CDS ygjK NC_000913.3 3228888 3231239 D putative isomerase; alpha-glucosidase 3228888..3231239 Escherichia coli str. K-12 substr. MG1655 947596 NP_417552.1 CDS fadH NC_000913.3 3231665 3233683 D 2,4-dienoyl-CoA reductase, NADH and FMN-linked 3231665..3233683 Escherichia coli str. K-12 substr. MG1655 947594 NP_417553.1 CDS higA NC_000913.3 3233728 3234144 R antitoxinof the HigB-HigA toxin-antitoxin system complement(3233728..3234144) Escherichia coli str. K-12 substr. MG1655 947593 NP_417554.1 CDS higB NC_000913.3 3234141 3234455 R mRNA interferase toxin of the HigB-HigA toxin-antitoxin system complement(3234141..3234455) Escherichia coli str. K-12 substr. MG1655 947591 NP_417555.4 CDS rlmG NC_000913.3 3234739 3235875 R putative enzyme; 23S rRNA m(2)G1835 methyltransferase, SAM-dependent complement(3234739..3235875) Escherichia coli str. K-12 substr. MG1655 947589 NP_417556.2 CDS ygjP NC_000913.3 3235960 3236463 D putative metal dependent hydrolase 3235960..3236463 Escherichia coli str. K-12 substr. MG1655 947650 NP_417557.1 CDS ygjQ NC_000913.3 3236540 3237232 D DUF218 superfamily protein 3236540..3237232 Escherichia coli str. K-12 substr. MG1655 947598 NP_417558.2 CDS ygjR NC_000913.3 3237311 3238297 D putative NAD(P)-dependent dehydrogenase 3237311..3238297 Escherichia coli str. K-12 substr. MG1655 947600 YP_026201.1 CDS alx NC_000913.3 3238580 3239545 D putative transport protein; putative membrane-bound redox modulator 3238580..3239545 Escherichia coli str. K-12 substr. MG1655 947607 NP_417560.1 CDS sstT NC_000913.3 3239944 3241188 D putative transport protein; sodium:serine/threonine symporter 3239944..3241188 Escherichia coli str. K-12 substr. MG1655 947605 NP_417561.1 CDS ygjV NC_000913.3 3241193 3241744 R Imp-YgjV family inner membrane protein complement(3241193..3241744) Escherichia coli str. K-12 substr. MG1655 947604 NP_417562.1 CDS uxaA NC_000913.3 3241827 3243314 R altronate hydrolase complement(3241827..3243314) Escherichia coli str. K-12 substr. MG1655 947603 NP_417563.1 CDS uxaC NC_000913.3 3243329 3244741 R uronate isomerase complement(3243329..3244741) Escherichia coli str. K-12 substr. MG1655 947599 NP_417564.1 CDS exuT NC_000913.3 3245104 3246522 D transport of hexuronates; hexuronate transporter 3245104..3246522 Escherichia coli str. K-12 substr. MG1655 947601 NP_417565.2 CDS exuR NC_000913.3 3246652 3247428 D negative regulator of exu regulon, exuT, uxaAC, and uxuB; hexuronate regulon transcriptional repressor; autorepressor 3246652..3247428 Escherichia coli str. K-12 substr. MG1655 947602 NP_417566.1 CDS yqjA NC_000913.3 3247773 3248435 D general envelope maintenance protein; DedA family inner membrane protein 3247773..3248435 Escherichia coli str. K-12 substr. MG1655 947643 NP_417567.1 CDS mzrA NC_000913.3 3248439 3248822 D modulator of EnvZ/OmpR regulon 3248439..3248822 Escherichia coli str. K-12 substr. MG1655 947619 NP_417568.2 CDS yqjC NC_000913.3 3248969 3249337 D DUF1090 family putative periplasmic protein 3248969..3249337 Escherichia coli str. K-12 substr. MG1655 947622 NP_417569.1 CDS yqjD NC_000913.3 3249375 3249680 D membrane-anchored ribosome-binding protein 3249375..3249680 Escherichia coli str. K-12 substr. MG1655 947614 NP_417570.1 CDS yqjE NC_000913.3 3249683 3250087 D DUF1469 family inner membrane protein 3249683..3250087 Escherichia coli str. K-12 substr. MG1655 947611 NP_417571.1 CDS yqjK NC_000913.3 3250077 3250376 D uncharacterized protein 3250077..3250376 Escherichia coli str. K-12 substr. MG1655 947610 NP_417572.2 CDS yqjF NC_000913.3 3250562 3250954 D putative quinol oxidase subunit 3250562..3250954 Escherichia coli str. K-12 substr. MG1655 947608 NP_417573.1 CDS yqjG NC_000913.3 3251024 3252010 D putative transferase; putative S-transferase 3251024..3252010 Escherichia coli str. K-12 substr. MG1655 947615 NP_417574.1 CDS yhaH NC_000913.3 3252304 3252669 D putative cytochrome; DUF805 family inner membrane protein 3252304..3252669 Escherichia coli str. K-12 substr. MG1655 947617 NP_417575.1 CDS yhaI NC_000913.3 3252911 3253267 D putative cytochrome; DUF805 family inner membrane protein 3252911..3253267 Escherichia coli str. K-12 substr. MG1655 947612 NP_417576.1 CDS yhaJ NC_000913.3 3253318 3254214 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(3253318..3254214) Escherichia coli str. K-12 substr. MG1655 947621 NP_417577.1 CDS yhaK NC_000913.3 3254319 3255020 D redox-sensitive bicupin 3254319..3255020 Escherichia coli str. K-12 substr. MG1655 947620 NP_417578.2 CDS yhaL NC_000913.3 3255043 3255207 D uncharacterized protein 3255043..3255207 Escherichia coli str. K-12 substr. MG1655 947618 YP_026202.1 CDS yhaM NC_000913.3 3255341 3256651 R conserved hypothetical protein; putative L-serine dehydratase alpha chain complement(3255341..3256651) Escherichia coli str. K-12 substr. MG1655 2847723 YP_026203.3 CDS yhaO NC_000913.3 3256679 3258010 R putative transport system permease protein; putative transporter complement(3256679..3258010) Escherichia coli str. K-12 substr. MG1655 947628 YP_026204.1 CDS tdcG NC_000913.3 3258285 3259649 R L-serine dehydratase; L-serine dehydratase 3, anaerobic complement(3258285..3259649) Escherichia coli str. K-12 substr. MG1655 2847724 NP_417583.4 CDS tdcF NC_000913.3 3259721 3260110 R putative reactive intermediate deaminase complement(3259721..3260110) Escherichia coli str. K-12 substr. MG1655 947624 YP_026205.1 CDS tdcE NC_000913.3 3260124 3262418 R probable formate acetyltransferase 3; pyruvate formate-lyase 4/2-ketobutyrate formate-lyase complement(3260124..3262418) Escherichia coli str. K-12 substr. MG1655 947623 NP_417585.2 CDS tdcD NC_000913.3 3262452 3263660 R propionate kinase/acetate kinase II, anaerobic; propionate kinase/acetate kinase C, anaerobic complement(3262452..3263660) Escherichia coli str. K-12 substr. MG1655 947635 NP_417586.1 CDS tdcC NC_000913.3 3263686 3265017 R anaerobically inducible L-threonine, L-serine permease; L-threonine/L-serine transporter complement(3263686..3265017) Escherichia coli str. K-12 substr. MG1655 947629 NP_417587.1 CDS tdcB NC_000913.3 3265039 3266028 R threonine dehydratase, catabolic; L-threonine dehydratase, catabolic complement(3265039..3266028) Escherichia coli str. K-12 substr. MG1655 947633 NP_417588.1 CDS tdcA NC_000913.3 3266127 3267065 R transcriptional activator of tdc operon; tdc operon transcriptional activator complement(3266127..3267065) Escherichia coli str. K-12 substr. MG1655 947494 NP_417589.4 CDS tdcR NC_000913.3 3267380 3267598 D threonine dehydratase operon activator protein; L-threonine dehydratase operon activator protein 3267380..3267598 Escherichia coli str. K-12 substr. MG1655 944907 NP_417590.2 CDS yhaB NC_000913.3 3267854 3268393 D uncharacterized protein 3267854..3268393 Escherichia coli str. K-12 substr. MG1655 947705 NP_417591.1 CDS yhaC NC_000913.3 3268415 3269602 D pentapetide repeats-related protein 3268415..3269602 Escherichia coli str. K-12 substr. MG1655 947557 NP_417593.4 CDS garK NC_000913.3 3270625 3271770 R glycerate kinase I complement(3270625..3271770) Escherichia coli str. K-12 substr. MG1655 947632 NP_417594.3 CDS garR NC_000913.3 3271867 3272751 R tartronate semialdehyde reductase (TSAR); tartronate semialdehyde reductase complement(3271867..3272751) Escherichia coli str. K-12 substr. MG1655 947631 NP_417595.1 CDS garL NC_000913.3 3272787 3273557 R alpha-dehydro-beta-deoxy-D-glucarate aldolase complement(3272787..3273557) Escherichia coli str. K-12 substr. MG1655 947630 NP_417596.1 CDS garP NC_000913.3 3273573 3274907 R putative transport protein; putative (D)-galactarate transporter complement(3273573..3274907) Escherichia coli str. K-12 substr. MG1655 947642 NP_417597.1 CDS garD NC_000913.3 3275282 3276853 D (D)-galactarate dehydrogenase 3275282..3276853 Escherichia coli str. K-12 substr. MG1655 947641 NP_417598.1 CDS prlF NC_000913.3 3277002 3277337 D putative protease; htrA suppressor protein; antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system 3277002..3277337 Escherichia coli str. K-12 substr. MG1655 947639 NP_417599.1 CDS yhaV NC_000913.3 3277337 3277801 D toxin of the SohB(PrlF)-YhaV toxin-antitoxin system 3277337..3277801 Escherichia coli str. K-12 substr. MG1655 947638 NP_417600.1 CDS agaR NC_000913.3 3277856 3278665 R putative DEOR-type transcriptional regulator of aga operon; transcriptional repressor of the aga regulon complement(3277856..3278665) Escherichia coli str. K-12 substr. MG1655 947636 NP_417601.1 CDS kbaZ NC_000913.3 3278914 3280194 D putative tagatose 6-phosphate kinase 2; tagatose 6-phosphate aldolase 1, kbaZ subunit 3278914..3280194 Escherichia coli str. K-12 substr. MG1655 947637 NP_417602.4 CDS agaV NC_000913.3 3280217 3280690 D PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA); N-acetylgalactosamine-specific enzyme IIB component of PTS 3280217..3280690 Escherichia coli str. K-12 substr. MG1655 947648 b3134 CDS agaW NC_000913.3 3280701 3281075 D N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene);enzyme; Central intermediary metabolism: Amino sugars; PTS system N-acetylgalactosameine-specific IIC component 2; 3280701..3281075 Escherichia coli str. K-12 substr. MG1655 947647 b3135 CDS agaA NC_000913.3 3281071 3281625 D pseudogene, N-acetylgalactosamine-6-phosphate deacetylase fragment; putative N-acetylgalactosamine-6-phosphate deacetylase; 3281071..3281625 Escherichia coli str. K-12 substr. MG1655 947646 NP_417605.1 CDS agaS NC_000913.3 3281976 3283130 D putative tagatose-6-phosphate aldose/ketose isomerase; tagatose-6-phosphate ketose/aldose isomerase 3281976..3283130 Escherichia coli str. K-12 substr. MG1655 947645 NP_417606.1 CDS kbaY NC_000913.3 3283143 3284003 D tagatose-bisphosphate aldolase 2; tagatose 6-phosphate aldolase 1, kbaY subunit 3283143..3284003 Escherichia coli str. K-12 substr. MG1655 947644 NP_417607.1 CDS agaB NC_000913.3 3284170 3284646 D PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA); N-acetylgalactosamine-specific enzyme IIB component of PTS 3284170..3284646 Escherichia coli str. K-12 substr. MG1655 947653 NP_417608.1 CDS agaC NC_000913.3 3284685 3285488 D PTS system N-acetylgalactosamine-specific IIC component 1; N-acetylgalactosamine-specific enzyme IIC component of PTS 3284685..3285488 Escherichia coli str. K-12 substr. MG1655 947652 NP_417609.1 CDS agaD NC_000913.3 3285478 3286269 D PTS system, N-acetylglucosamine enzyme IID component 1; N-acetylgalactosamine-specific enzyme IID component of PTS 3285478..3286269 Escherichia coli str. K-12 substr. MG1655 947649 NP_417610.1 CDS agaI NC_000913.3 3286270 3287025 D putative galactosamine-6-phosphate isomerase; galactosamine-6-phosphate isomerase 3286270..3287025 Escherichia coli str. K-12 substr. MG1655 947985 NP_417611.1 CDS yraH NC_000913.3 3287426 3288010 D putative fimbrial-like protein; putative fimbrial-like adhesin protein 3287426..3288010 Escherichia coli str. K-12 substr. MG1655 947658 NP_417612.1 CDS yraI NC_000913.3 3288090 3288785 D putative chaperone; putative periplasmic pilin chaperone 3288090..3288785 Escherichia coli str. K-12 substr. MG1655 947657 NP_417613.1 CDS yraJ NC_000913.3 3288814 3291330 D putative outer membrane protein 3288814..3291330 Escherichia coli str. K-12 substr. MG1655 947656 NP_417614.1 CDS yraK NC_000913.3 3291341 3292432 D putative fimbrial protein; putative fimbrial-like adhesin protein 3291341..3292432 Escherichia coli str. K-12 substr. MG1655 947654 NP_417615.1 CDS rsmI NC_000913.3 3292475 3293335 R 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent complement(3292475..3293335) Escherichia coli str. K-12 substr. MG1655 947664 NP_417616.1 CDS lpoA NC_000913.3 3293400 3295436 D putative glycosylase; OM lipoprotein stimulator of MrcA transpeptidase 3293400..3295436 Escherichia coli str. K-12 substr. MG1655 947663 NP_417617.1 CDS yraN NC_000913.3 3295394 3295789 D UPF0102 family protein 3295394..3295789 Escherichia coli str. K-12 substr. MG1655 947662 NP_417618.1 CDS diaA NC_000913.3 3295809 3296399 D DnaA initiator-associating factor for replication initiation 3295809..3296399 Escherichia coli str. K-12 substr. MG1655 947661 NP_417619.1 CDS yraP NC_000913.3 3296409 3296984 D putative periplasmic protein; outer membrane lipoprotein 3296409..3296984 Escherichia coli str. K-12 substr. MG1655 947659 NP_417620.1 CDS yraQ NC_000913.3 3297098 3298138 R putative inner membrane permease complement(3297098..3298138) Escherichia coli str. K-12 substr. MG1655 947668 NP_417621.2 CDS yraR NC_000913.3 3298211 3298846 R putative nucleoside-diphosphate-sugar epimerase complement(3298211..3298846) Escherichia coli str. K-12 substr. MG1655 947667 NP_417622.2 CDS yhbO NC_000913.3 3298974 3299492 D stress-resistance protein 3298974..3299492 Escherichia coli str. K-12 substr. MG1655 947666 NP_417623.1 CDS yhbP NC_000913.3 3299472 3299915 R UPF0306 family protein complement(3299472..3299915) Escherichia coli str. K-12 substr. MG1655 947665 NP_417624.1 CDS yhbQ NC_000913.3 3299966 3300268 D GIY-YIG nuclease superfamily protein 3299966..3300268 Escherichia coli str. K-12 substr. MG1655 947671 NP_417625.1 CDS yhbS NC_000913.3 3300255 3300758 R putative acyl-CoA transferase complement(3300255..3300758) Escherichia coli str. K-12 substr. MG1655 947670 NP_417626.1 CDS yhbT NC_000913.3 3300752 3301276 R SCP-2 sterol transfer family protein complement(3300752..3301276) Escherichia coli str. K-12 substr. MG1655 947669 NP_417627.1 CDS yhbU NC_000913.3 3301485 3302480 D putative collagenase; U32 peptidase family protein 3301485..3302480 Escherichia coli str. K-12 substr. MG1655 949115 NP_417628.2 CDS yhbV NC_000913.3 3302489 3303367 D U32 peptidase family protein 3302489..3303367 Escherichia coli str. K-12 substr. MG1655 949117 NP_417629.1 CDS yhbW NC_000913.3 3303448 3304455 D putative enzyme; putative luciferase-like monooxygenase 3303448..3304455 Escherichia coli str. K-12 substr. MG1655 947677 NP_417630.1 CDS mtr NC_000913.3 3304573 3305817 R tryptophan-specific transport protein; tryptophan transporter of high affinity complement(3304573..3305817) Escherichia coli str. K-12 substr. MG1655 947675 NP_417631.2 CDS deaD NC_000913.3 3305971 3307860 R inducible ATP-independent RNA helicase; ATP-dependent RNA helicase complement(3305971..3307860) Escherichia coli str. K-12 substr. MG1655 947674 YP_002791258.1 CDS yrbN NC_000913.3 3307853 3307933 R uncharacterized protein complement(3307853..3307933) Escherichia coli str. K-12 substr. MG1655 7751619 NP_417632.1 CDS nlpI NC_000913.3 3308040 3308924 R lipoprotein involved in osmotic sensitivity and filamentation complement(3308040..3308924) Escherichia coli str. K-12 substr. MG1655 947673 NP_417633.4 CDS pnp NC_000913.3 3309033 3311168 R polynucleotide phosphorylase; cytidylate kinase activity; polynucleotide phosphorylase/polyadenylase complement(3309033..3311168) Escherichia coli str. K-12 substr. MG1655 947672 NP_417634.1 CDS rpsO NC_000913.3 3311415 3311684 R 30S ribosomal subunit protein S15 complement(3311415..3311684) Escherichia coli str. K-12 substr. MG1655 947686 NP_417635.1 CDS truB NC_000913.3 3311833 3312777 R tRNA pseudouridine 5S synthase; tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase complement(3311833..3312777) Escherichia coli str. K-12 substr. MG1655 947687 NP_417636.1 CDS rbfA NC_000913.3 3312777 3313178 R ribosome-binding factor A; 30s ribosome binding factor complement(3312777..3313178) Escherichia coli str. K-12 substr. MG1655 947685 NP_417637.1 CDS infB NC_000913.3 3313342 3316014 R protein chain initiation factor IF-2; translation initiation factor IF-2 complement(3313342..3316014) Escherichia coli str. K-12 substr. MG1655 947684 NP_417638.1 CDS nusA NC_000913.3 3316039 3317526 R transcription pausing; L factor; transcription termination/antitermination L factor complement(3316039..3317526) Escherichia coli str. K-12 substr. MG1655 947682 NP_417639.6 CDS rimP NC_000913.3 3317554 3318006 R ribosome maturation factor for 30S subunits complement(3317554..3318006) Escherichia coli str. K-12 substr. MG1655 947680 NP_417640.1 CDS argG NC_000913.3 3318637 3319980 D argininosuccinate synthetase 3318637..3319980 Escherichia coli str. K-12 substr. MG1655 947590 NP_417641.4 CDS yhbX NC_000913.3 3319988 3321613 R putative alkaline phosphatase I; putative EptAB family phosphoethanolamine transferase, inner membrane protein complement(3319988..3321613) Escherichia coli str. K-12 substr. MG1655 947711 NP_417642.1 CDS secG NC_000913.3 3322173 3322505 R protein export - membrane protein; preprotein translocase membrane subunit complement(3322173..3322505) Escherichia coli str. K-12 substr. MG1655 947720 NP_417643.1 CDS glmM NC_000913.3 3322733 3324070 R phosphoglucosamine mutase complement(3322733..3324070) Escherichia coli str. K-12 substr. MG1655 947692 NP_417644.4 CDS folP NC_000913.3 3324063 3324911 R 7,8-dihydropteroate synthase complement(3324063..3324911) Escherichia coli str. K-12 substr. MG1655 947691 NP_417645.1 CDS ftsH NC_000913.3 3325001 3326935 R protease, ATP-dependent zinc-metallo complement(3325001..3326935) Escherichia coli str. K-12 substr. MG1655 947690 NP_417646.1 CDS rlmE NC_000913.3 3327035 3327664 R 23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent complement(3327035..3327664) Escherichia coli str. K-12 substr. MG1655 947689 NP_417647.1 CDS yhbY NC_000913.3 3327790 3328083 D RNA binding protein associated with pre-50S ribosomal subunits 3327790..3328083 Escherichia coli str. K-12 substr. MG1655 947688 NP_417648.4 CDS greA NC_000913.3 3328239 3328715 R transcription elongation factor: cleaves 3' nucleotide of paused mRNA; transcript cleavage factor complement(3328239..3328715) Escherichia coli str. K-12 substr. MG1655 947696 NP_417649.1 CDS dacB NC_000913.3 3328963 3330396 D D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4; D-alanyl-D-alanine carboxypeptidase 3328963..3330396 Escherichia coli str. K-12 substr. MG1655 947693 NP_417650.1 CDS obgE NC_000913.3 3330582 3331754 R putative GTP-binding factor; GTPase involved in cell partioning and DNA repair complement(3330582..3331754) Escherichia coli str. K-12 substr. MG1655 947694 NP_417651.1 CDS yhbE NC_000913.3 3331770 3332735 R EamA family inner membrane putative transporter complement(3331770..3332735) Escherichia coli str. K-12 substr. MG1655 947699 NP_417652.1 CDS rpmA NC_000913.3 3332862 3333119 R 50S ribosomal subunit protein L27 complement(3332862..3333119) Escherichia coli str. K-12 substr. MG1655 945190 NP_417653.1 CDS rplU NC_000913.3 3333140 3333451 R 50S ribosomal subunit protein L21 complement(3333140..3333451) Escherichia coli str. K-12 substr. MG1655 949057 NP_417654.1 CDS ispB NC_000913.3 3333710 3334681 D octaprenyl diphosphate synthase 3333710..3334681 Escherichia coli str. K-12 substr. MG1655 947364 NP_417655.1 CDS sfsB NC_000913.3 3334909 3335187 D regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu; malPQ operon transcriptional activator 3334909..3335187 Escherichia coli str. K-12 substr. MG1655 947960 NP_417656.1 CDS murA NC_000913.3 3335235 3336494 R first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3335235..3336494) Escherichia coli str. K-12 substr. MG1655 947703 NP_417657.2 CDS ibaG NC_000913.3 3336549 3336803 R acid stress protein; putative transcriptional regulator, BolA family complement(3336549..3336803) Escherichia coli str. K-12 substr. MG1655 947958 NP_417658.4 CDS mlaB NC_000913.3 3336963 3337256 R ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component complement(3336963..3337256) Escherichia coli str. K-12 substr. MG1655 947954 NP_417659.1 CDS mlaC NC_000913.3 3337256 3337891 R ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein complement(3337256..3337891) Escherichia coli str. K-12 substr. MG1655 947710 NP_417660.1 CDS mlaD NC_000913.3 3337910 3338461 R ABC transporter maintaining OM lipid asymmetry, anchored periplasmic binding protein complement(3337910..3338461) Escherichia coli str. K-12 substr. MG1655 947712 NP_417661.1 CDS mlaE NC_000913.3 3338466 3339248 R ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein complement(3338466..3339248) Escherichia coli str. K-12 substr. MG1655 947732 NP_417662.1 CDS mlaF NC_000913.3 3339256 3340065 R putative ATP-binding component of a transport system; ABC transporter maintaining OM lipid asymmetry, ATP-binding protein complement(3339256..3340065) Escherichia coli str. K-12 substr. MG1655 947729 NP_417663.1 CDS yrbG NC_000913.3 3340275 3341252 D putative calcium/sodium:proton antiporter 3340275..3341252 Escherichia coli str. K-12 substr. MG1655 947730 NP_417664.1 CDS kdsD NC_000913.3 3341266 3342252 D putative isomerase; D-arabinose 5-phosphate isomerase 3341266..3342252 Escherichia coli str. K-12 substr. MG1655 947734 NP_417665.1 CDS kdsC NC_000913.3 3342273 3342839 D 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3342273..3342839 Escherichia coli str. K-12 substr. MG1655 947717 NP_417666.1 CDS lptC NC_000913.3 3342836 3343411 D lipopolysaccharide export, IM-tethered periplasmic protein of the LptBFGC export complex 3342836..3343411 Escherichia coli str. K-12 substr. MG1655 947722 NP_417667.1 CDS lptA NC_000913.3 3343380 3343937 D periplasmic LPS-binding protein 3343380..3343937 Escherichia coli str. K-12 substr. MG1655 947920 NP_417668.1 CDS lptB NC_000913.3 3343944 3344669 D putative ATP-binding component of a transport system; lipopolysaccharide export ABC transporter ATP-binding protein of the LptBFGC export complex 3343944..3344669 Escherichia coli str. K-12 substr. MG1655 947725 NP_417669.1 CDS rpoN NC_000913.3 3344717 3346150 D RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation; RNA polymerase, sigma 54 (sigma N) factor 3344717..3346150 Escherichia coli str. K-12 substr. MG1655 947714 NP_417670.1 CDS hpf NC_000913.3 3346173 3346460 D probable sigma-54 modulation protein; ribosome hibernation promoting factor HPF; stabilizes 70S dimers (100S) 3346173..3346460 Escherichia coli str. K-12 substr. MG1655 947718 NP_417671.1 CDS ptsN NC_000913.3 3346578 3347069 D phosphotransferase system enzyme IIA, regulates N metabolism; sugar-specific enzyme IIA component of PTS 3346578..3347069 Escherichia coli str. K-12 substr. MG1655 947721 NP_417672.1 CDS yhbJ NC_000913.3 3347115 3347969 D adaptor protein RapZ for GlmZ/GlmY sRNA decay; glucosamine-6-phosphate regulated; NTPase 3347115..3347969 Escherichia coli str. K-12 substr. MG1655 947727 NP_417673.1 CDS npr NC_000913.3 3347966 3348238 D phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 3347966..3348238 Escherichia coli str. K-12 substr. MG1655 947914 NP_417674.1 CDS yrbL NC_000913.3 3348452 3349084 D Mg(2+)-starvation-stimulated protein 3348452..3349084 Escherichia coli str. K-12 substr. MG1655 947910 NP_417675.1 CDS mtgA NC_000913.3 3349081 3349809 R putative peptidoglycan enzyme; biosynthetic peptidoglycan transglycosylase complement(3349081..3349809) Escherichia coli str. K-12 substr. MG1655 947728 NP_417676.2 CDS elbB NC_000913.3 3349806 3350459 R sigma cross-reacting protein 27A (SCRP-27A); isoprenoid biosynthesis protein with amidotransferase-like domain complement(3349806..3350459) Escherichia coli str. K-12 substr. MG1655 947903 YP_026207.1 CDS arcB NC_000913.3 3350689 3353025 R aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA; aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB complement(3350689..3353025) Escherichia coli str. K-12 substr. MG1655 947887 NP_417678.1 CDS yhcC NC_000913.3 3353121 3354050 R putative Fe-S oxidoreductase, Radical SAM superfamily protein complement(3353121..3354050) Escherichia coli str. K-12 substr. MG1655 947733 NP_417679.2 CDS gltB NC_000913.3 3354725 3359185 D glutamate synthase, large subunit 3354725..3359185 Escherichia coli str. K-12 substr. MG1655 947724 NP_417680.1 CDS gltD NC_000913.3 3359198 3360616 D glutamate synthase, small subunit; glutamate synthase, 4Fe-4S protein, small subunit 3359198..3360616 Escherichia coli str. K-12 substr. MG1655 947723 NP_417681.1 CDS gltF NC_000913.3 3361176 3361940 D regulator of gltBDF operon, induction of Ntr enzymes; periplasmic protein 3361176..3361940 Escherichia coli str. K-12 substr. MG1655 947746 NP_417682.1 CDS yhcA NC_000913.3 3362112 3362786 D putative chaperone; putative periplasmic chaperone protein 3362112..3362786 Escherichia coli str. K-12 substr. MG1655 947741 NP_417683.1 CDS yhcD NC_000913.3 3362807 3365188 D putative outer membrane protein; putative outer membrane fimbrial subunit usher protein 3362807..3365188 Escherichia coli str. K-12 substr. MG1655 947738 b4569 CDS yhcE NC_000913.3 3365185 3366929 D pseudogene fragment; interrupted by IS5; join(3365185..3365551,3366751..3366929) Escherichia coli str. K-12 substr. MG1655 4056032 NP_417685.1 CDS insH1 NC_000913.3 3365702 3366718 R IS5 transposase and trans-activator complement(3365702..3366718) Escherichia coli str. K-12 substr. MG1655 947743 NP_417686.1 CDS yhcF NC_000913.3 3366926 3367642 D putative transcriptional regulator 3366926..3367642 Escherichia coli str. K-12 substr. MG1655 947735 NP_417687.1 CDS yhcG NC_000913.3 3367827 3368954 D DUF1016 family protein in the PD-(D/E)XK nuclease superfamily 3367827..3368954 Escherichia coli str. K-12 substr. MG1655 947739 NP_417688.1 CDS yhcH NC_000913.3 3369014 3369478 R DUF386 family protein, cupin superfamily complement(3369014..3369478) Escherichia coli str. K-12 substr. MG1655 947750 NP_417689.4 CDS nanK NC_000913.3 3369475 3370350 R N-acetylmannosamine kinase complement(3369475..3370350) Escherichia coli str. K-12 substr. MG1655 947757 NP_417690.1 CDS nanE NC_000913.3 3370347 3371036 R putative N-acetylmannosamine-6-P epimerase complement(3370347..3371036) Escherichia coli str. K-12 substr. MG1655 947745 NP_417691.4 CDS nanT NC_000913.3 3371084 3372574 R sialic acid transporter complement(3371084..3372574) Escherichia coli str. K-12 substr. MG1655 947740 NP_417692.1 CDS nanA NC_000913.3 3372683 3373576 R N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?; N-acetylneuraminate lyase complement(3372683..3373576) Escherichia coli str. K-12 substr. MG1655 947742 NP_417693.3 CDS nanR NC_000913.3 3373698 3374489 R transcriptional repressor of the nan operon, induced by sialic acid complement(3373698..3374489) Escherichia coli str. K-12 substr. MG1655 945468 NP_417694.1 CDS dcuD NC_000913.3 3374869 3376236 D putative transporter 3374869..3376236 Escherichia coli str. K-12 substr. MG1655 946575 NP_417695.1 CDS sspB NC_000913.3 3376279 3376776 R stringent starvation protein B; ClpXP protease specificity enhancing factor complement(3376279..3376776) Escherichia coli str. K-12 substr. MG1655 944774 NP_417696.1 CDS sspA NC_000913.3 3376782 3377420 R regulator of transcription; stringent starvation protein A; stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase homolog complement(3376782..3377420) Escherichia coli str. K-12 substr. MG1655 944744 NP_417697.1 CDS rpsI NC_000913.3 3377815 3378207 R 30S ribosomal subunit protein S9 complement(3377815..3378207) Escherichia coli str. K-12 substr. MG1655 949000 NP_417698.1 CDS rplM NC_000913.3 3378223 3378651 R 50S ribosomal subunit protein L13 complement(3378223..3378651) Escherichia coli str. K-12 substr. MG1655 947828 NP_417699.1 CDS yhcM NC_000913.3 3378870 3379997 R putative AFG1-like family P-loop ATPase complement(3378870..3379997) Escherichia coli str. K-12 substr. MG1655 947821 NP_417700.2 CDS yhcB NC_000913.3 3380191 3380589 D DUF1043 family inner membrane-anchored protein 3380191..3380589 Escherichia coli str. K-12 substr. MG1655 947815 NP_417701.1 CDS degQ NC_000913.3 3380743 3382110 D serine endoprotease; serine endoprotease, periplasmic 3380743..3382110 Escherichia coli str. K-12 substr. MG1655 947812 NP_417702.1 CDS degS NC_000913.3 3382200 3383267 D protease; serine endoprotease, periplasmic 3382200..3383267 Escherichia coli str. K-12 substr. MG1655 947865 NP_417703.1 CDS mdh NC_000913.3 3383330 3384268 R malate dehydrogenase; malate dehydrogenase, NAD(P)-binding complement(3383330..3384268) Escherichia coli str. K-12 substr. MG1655 947854 NP_417704.1 CDS argR NC_000913.3 3384703 3385173 D repressor of arg regulon; cer-mediated site specific recombination; l-arginine-responsive arginine metabolism regulon transcriptional regulator 3384703..3385173 Escherichia coli str. K-12 substr. MG1655 947861 NP_417705.2 CDS yhcN NC_000913.3 3385538 3385801 D cadmium and peroxide resistance protein, stress-induced 3385538..3385801 Escherichia coli str. K-12 substr. MG1655 947835 NP_417706.1 CDS yhcO NC_000913.3 3385857 3386129 R putative barnase inhibitor complement(3385857..3386129) Escherichia coli str. K-12 substr. MG1655 947830 NP_417707.1 CDS aaeB NC_000913.3 3386221 3388188 R p-hydroxybenzoic acid efflux system component complement(3386221..3388188) Escherichia coli str. K-12 substr. MG1655 947747 NP_417708.1 CDS aaeA NC_000913.3 3388194 3389126 R p-hydroxybenzoic acid efflux system component complement(3388194..3389126) Escherichia coli str. K-12 substr. MG1655 947748 NP_417709.2 CDS aaeX NC_000913.3 3389134 3389337 R DUF1656 family putative inner membrane efflux pump associated protein complement(3389134..3389337) Escherichia coli str. K-12 substr. MG1655 947751 NP_417710.1 CDS aaeR NC_000913.3 3389520 3390449 D transcriptional regulator for aaeXAB operon 3389520..3390449 Escherichia coli str. K-12 substr. MG1655 947760 NP_417711.1 CDS tldD NC_000913.3 3390583 3392028 R suppresses inhibitory activity of CsrA; putative peptidase complement(3390583..3392028) Escherichia coli str. K-12 substr. MG1655 947749 YP_026208.1 CDS yhdP NC_000913.3 3392458 3396258 R DUF3971-AsmA2 domains protein complement(3392458..3396258) Escherichia coli str. K-12 substr. MG1655 2847740 NP_417713.2 CDS rng NC_000913.3 3396326 3397795 R ribonuclease G complement(3396326..3397795) Escherichia coli str. K-12 substr. MG1655 947744 NP_417714.1 CDS yhdE NC_000913.3 3397785 3398378 R Maf-like protein complement(3397785..3398378) Escherichia coli str. K-12 substr. MG1655 947753 NP_417715.1 CDS mreD NC_000913.3 3398387 3398875 R rod shape-determining protein; cell wall structural complex MreBCD transmembrane component MreD complement(3398387..3398875) Escherichia coli str. K-12 substr. MG1655 947756 NP_417716.1 CDS mreC NC_000913.3 3398875 3399978 R rod shape-determining protein; cell wall structural complex MreBCD transmembrane component MreC complement(3398875..3399978) Escherichia coli str. K-12 substr. MG1655 947655 NP_417717.2 CDS mreB NC_000913.3 3400044 3401087 R regulator of ftsI, penicillin binding protein 3, septation function; cell wall structural complex MreBCD, actin-like component MreB complement(3400044..3401087) Escherichia coli str. K-12 substr. MG1655 948588 NP_417718.1 CDS csrD NC_000913.3 3401392 3403332 R targeting factor for csrBC sRNA degradation complement(3401392..3403332) Escherichia coli str. K-12 substr. MG1655 947702 NP_417719.1 CDS acuI NC_000913.3 3403484 3404458 D putative dehydrogenase; putative acryloyl-CoA reductase 3403484..3404458 Escherichia coli str. K-12 substr. MG1655 947848 b4697 CDS yrdF NC_000913.3 3404495 3404637 D pseudogene, conserved protein; 3404495..3404637 Escherichia coli str. K-12 substr. MG1655 7751640 b4646 CDS yrdE NC_000913.3 3404638 3405031 D pseudogene, yedZ paralog; join(3404638..3404733,3404732..3405031) Escherichia coli str. K-12 substr. MG1655 5625572 NP_417721.1 CDS accB NC_000913.3 3405436 3405906 D acetylCoA carboxylase, BCCP subunit; carrier of biotin; acetyl CoA carboxylase, BCCP subunit 3405436..3405906 Escherichia coli str. K-12 substr. MG1655 947758 NP_417722.1 CDS accC NC_000913.3 3405917 3407266 D acetyl CoA carboxylase, biotin carboxylase subunit; acetyl-CoA carboxylase, biotin carboxylase subunit 3405917..3407266 Escherichia coli str. K-12 substr. MG1655 947761 NP_417723.1 CDS yhdT NC_000913.3 3407375 3407617 D DUF997 family putative inner membrane protein 3407375..3407617 Escherichia coli str. K-12 substr. MG1655 947762 NP_417724.4 CDS panF NC_000913.3 3407607 3409058 D sodium/pantothenate symporter; pantothenate:sodium symporter 3407607..3409058 Escherichia coli str. K-12 substr. MG1655 947752 NP_417725.1 CDS prmA NC_000913.3 3409070 3409951 D methyltransferase for 50S ribosomal subunit protein L11 3409070..3409951 Escherichia coli str. K-12 substr. MG1655 947708 NP_417726.1 CDS dusB NC_000913.3 3410280 3411245 D putative dehydrogenase; tRNA-dihydrouridine synthase B 3410280..3411245 Escherichia coli str. K-12 substr. MG1655 947707 NP_417727.1 CDS fis NC_000913.3 3411271 3411567 D site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription; global DNA-binding transcriptional dual regulator 3411271..3411567 Escherichia coli str. K-12 substr. MG1655 947697 NP_417728.4 CDS yhdJ NC_000913.3 3411653 3412537 D putative methyltransferase; DNA adenine methyltransferase, SAM-dependent 3411653..3412537 Escherichia coli str. K-12 substr. MG1655 947695 NP_417729.1 CDS yhdU NC_000913.3 3412621 3412800 D putative membrane protein 3412621..3412800 Escherichia coli str. K-12 substr. MG1655 947700 NP_417730.1 CDS acrS NC_000913.3 3412803 3413465 R putative transcriptional regulator; acrAB operon transcriptional repressor complement(3412803..3413465) Escherichia coli str. K-12 substr. MG1655 947704 NP_417731.1 CDS acrE NC_000913.3 3413864 3415021 D transmembrane protein affects septum formation and cell membrane permeability; cytoplasmic membrane lipoprotein 3413864..3415021 Escherichia coli str. K-12 substr. MG1655 947706 NP_417732.1 CDS acrF NC_000913.3 3415033 3418137 D integral transmembrane protein; acridine resistance; multidrug efflux system protein 3415033..3418137 Escherichia coli str. K-12 substr. MG1655 947768 NP_417733.1 CDS yhdV NC_000913.3 3418390 3418611 D putative outer membrane protein 3418390..3418611 Escherichia coli str. K-12 substr. MG1655 947767 b3268 CDS yhdW NC_000913.3 3419042 3420066 D pseudogene, amino-acid transporter homology;putative transport; Not classified; putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily; join(3419042..3419107,3419107..3420066) Escherichia coli str. K-12 substr. MG1655 947766 YP_026209.1 CDS yhdX NC_000913.3 3420134 3421315 D putative transport system permease protein; membrane component of ABC superfamily; putative amino-acid transporter subunit 3420134..3421315 Escherichia coli str. K-12 substr. MG1655 947765 NP_417736.2 CDS yhdY NC_000913.3 3421325 3422428 D putative transport system permease protein; membrane component of ABC superfamily; putative amino-acid transporter subunit 3421325..3422428 Escherichia coli str. K-12 substr. MG1655 947764 NP_417737.1 CDS yhdZ NC_000913.3 3422436 3423194 D putative ATP-binding component of a transport system; ATP-binding component of ABC superfamily; putative amino-acid transporter subunit 3422436..3423194 Escherichia coli str. K-12 substr. MG1655 947763 NP_417738.4 CDS yrdA NC_000913.3 3429236 3429790 D putative transferase; bacterial transferase hexapeptide domain protein 3429236..3429790 Escherichia coli str. K-12 substr. MG1655 947775 NP_417739.1 CDS yrdB NC_000913.3 3429766 3430023 R DUF1488 family protein complement(3429766..3430023) Escherichia coli str. K-12 substr. MG1655 947774 NP_417740.1 CDS aroE NC_000913.3 3430020 3430838 R dehydroshikimate reductase; dehydroshikimate reductase, NAD(P)-binding complement(3430020..3430838) Escherichia coli str. K-12 substr. MG1655 947776 NP_417741.1 CDS tsaC NC_000913.3 3430843 3431415 R tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase complement(3430843..3431415) Escherichia coli str. K-12 substr. MG1655 947783 YP_026210.1 CDS yrdD NC_000913.3 3431420 3431962 R putative DNA topoisomerase complement(3431420..3431962) Escherichia coli str. K-12 substr. MG1655 947782 NP_417743.1 CDS smg NC_000913.3 3431991 3432464 R DUF494 family putative periplasmic protein complement(3431991..3432464) Escherichia coli str. K-12 substr. MG1655 947781 YP_026211.1 CDS smf NC_000913.3 3432436 3433560 R DNA recombination-mediator A family protein complement(3432436..3433560) Escherichia coli str. K-12 substr. MG1655 2847708 NP_417745.1 CDS def NC_000913.3 3433690 3434199 D peptide deformylase 3433690..3434199 Escherichia coli str. K-12 substr. MG1655 947780 NP_417746.1 CDS fmt NC_000913.3 3434214 3435161 D 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase 3434214..3435161 Escherichia coli str. K-12 substr. MG1655 947779 NP_417747.1 CDS rsmB NC_000913.3 3435207 3436496 D 16S rRNA m5C967 methyltransferase; 16S rRNA m(5)C967 methyltransferase, SAM-dependent 3435207..3436496 Escherichia coli str. K-12 substr. MG1655 947789 NP_417748.1 CDS trkA NC_000913.3 3436518 3437894 D transport of potassium; NAD-binding component of TrK potassium transporter 3436518..3437894 Escherichia coli str. K-12 substr. MG1655 947788 NP_417749.1 CDS mscL NC_000913.3 3438024 3438434 D mechanosensitive channel protein, high conductance 3438024..3438434 Escherichia coli str. K-12 substr. MG1655 947787 YP_588467.1 CDS arfA NC_000913.3 3438431 3438649 R alternate ribosome-rescue factor A complement(3438431..3438649) Escherichia coli str. K-12 substr. MG1655 1450289 NP_417751.1 CDS zntR NC_000913.3 3438705 3439130 R zntA gene transcriptional activator complement(3438705..3439130) Escherichia coli str. K-12 substr. MG1655 947786 NP_417752.1 CDS yhdN NC_000913.3 3439141 3439509 R DUF1992 family protein complement(3439141..3439509) Escherichia coli str. K-12 substr. MG1655 947785 NP_417753.1 CDS rplQ NC_000913.3 3439616 3439999 R 50S ribosomal subunit protein L17 complement(3439616..3439999) Escherichia coli str. K-12 substr. MG1655 947784 NP_417754.1 CDS rpoA NC_000913.3 3440040 3441029 R RNA polymerase, alpha subunit complement(3440040..3441029) Escherichia coli str. K-12 substr. MG1655 947794 NP_417755.1 CDS rpsD NC_000913.3 3441055 3441675 R 30S ribosomal subunit protein S4 complement(3441055..3441675) Escherichia coli str. K-12 substr. MG1655 947793 NP_417756.1 CDS rpsK NC_000913.3 3441709 3442098 R 30S ribosomal subunit protein S11 complement(3441709..3442098) Escherichia coli str. K-12 substr. MG1655 947792 NP_417757.1 CDS rpsM NC_000913.3 3442115 3442471 R 30S ribosomal subunit protein S13 complement(3442115..3442471) Escherichia coli str. K-12 substr. MG1655 947791 NP_417758.1 CDS rpmJ NC_000913.3 3442618 3442734 R 50S ribosomal subunit protein L36 complement(3442618..3442734) Escherichia coli str. K-12 substr. MG1655 947805 NP_417759.1 CDS secY NC_000913.3 3442766 3444097 R putative ATPase subunit of translocase; preprotein translocase membrane subunit complement(3442766..3444097) Escherichia coli str. K-12 substr. MG1655 947799 NP_417760.1 CDS rplO NC_000913.3 3444105 3444539 R 50S ribosomal subunit protein L15 complement(3444105..3444539) Escherichia coli str. K-12 substr. MG1655 947798 NP_417761.1 CDS rpmD NC_000913.3 3444543 3444722 R 50S ribosomal subunit protein L30 complement(3444543..3444722) Escherichia coli str. K-12 substr. MG1655 947797 NP_417762.1 CDS rpsE NC_000913.3 3444726 3445229 R 30S ribosomal subunit protein S5 complement(3444726..3445229) Escherichia coli str. K-12 substr. MG1655 947795 NP_417763.1 CDS rplR NC_000913.3 3445244 3445597 R 50S ribosomal subunit protein L18 complement(3445244..3445597) Escherichia coli str. K-12 substr. MG1655 947804 NP_417764.1 CDS rplF NC_000913.3 3445607 3446140 R 50S ribosomal subunit protein L6 complement(3445607..3446140) Escherichia coli str. K-12 substr. MG1655 947803 NP_417765.1 CDS rpsH NC_000913.3 3446153 3446545 R 30S ribosomal subunit protein S8, and regulator; 30S ribosomal subunit protein S8 complement(3446153..3446545) Escherichia coli str. K-12 substr. MG1655 947802 NP_417766.1 CDS rpsN NC_000913.3 3446579 3446884 R 30S ribosomal subunit protein S14 complement(3446579..3446884) Escherichia coli str. K-12 substr. MG1655 947801 NP_417767.1 CDS rplE NC_000913.3 3446899 3447438 R 50S ribosomal subunit protein L5 complement(3446899..3447438) Escherichia coli str. K-12 substr. MG1655 947800 NP_417768.1 CDS rplX NC_000913.3 3447453 3447767 R 50S ribosomal subunit protein L24 complement(3447453..3447767) Escherichia coli str. K-12 substr. MG1655 947810 NP_417769.1 CDS rplN NC_000913.3 3447778 3448149 R 50S ribosomal subunit protein L14 complement(3447778..3448149) Escherichia coli str. K-12 substr. MG1655 947809 NP_417770.1 CDS rpsQ NC_000913.3 3448314 3448568 R 30S ribosomal subunit protein S17 complement(3448314..3448568) Escherichia coli str. K-12 substr. MG1655 947808 NP_417771.1 CDS rpmC NC_000913.3 3448568 3448759 R 50S ribosomal subunit protein L29 complement(3448568..3448759) Escherichia coli str. K-12 substr. MG1655 947807 NP_417772.1 CDS rplP NC_000913.3 3448759 3449169 R 50S ribosomal subunit protein L16 complement(3448759..3449169) Escherichia coli str. K-12 substr. MG1655 947806 NP_417773.1 CDS rpsC NC_000913.3 3449182 3449883 R 30S ribosomal subunit protein S3 complement(3449182..3449883) Escherichia coli str. K-12 substr. MG1655 947814 NP_417774.1 CDS rplV NC_000913.3 3449901 3450233 R 50S ribosomal subunit protein L22 complement(3449901..3450233) Escherichia coli str. K-12 substr. MG1655 947813 NP_417775.1 CDS rpsS NC_000913.3 3450248 3450526 R 30S ribosomal subunit protein S19 complement(3450248..3450526) Escherichia coli str. K-12 substr. MG1655 947811 NP_417776.1 CDS rplB NC_000913.3 3450543 3451364 R 50S ribosomal subunit protein L2 complement(3450543..3451364) Escherichia coli str. K-12 substr. MG1655 947820 NP_417777.1 CDS rplW NC_000913.3 3451382 3451684 R 50S ribosomal subunit protein L23 complement(3451382..3451684) Escherichia coli str. K-12 substr. MG1655 947819 NP_417778.1 CDS rplD NC_000913.3 3451681 3452286 R 50S ribosomal subunit protein L4, regulates expression of S10 operon; 50S ribosomal subunit protein L4 complement(3451681..3452286) Escherichia coli str. K-12 substr. MG1655 947818 NP_417779.1 CDS rplC NC_000913.3 3452297 3452926 R 50S ribosomal subunit protein L3 complement(3452297..3452926) Escherichia coli str. K-12 substr. MG1655 947817 NP_417780.1 CDS rpsJ NC_000913.3 3452959 3453270 R 30S ribosomal subunit protein S10 complement(3452959..3453270) Escherichia coli str. K-12 substr. MG1655 947816 NP_417781.1 CDS gspB NC_000913.3 3453508 3453927 R calcium-binding protein required for initiation of chromosome replication; part of gsp divergon involved in type II protein secretion complement(3453508..3453927) Escherichia coli str. K-12 substr. MG1655 947826 NP_417782.1 CDS gspA NC_000913.3 3453929 3455398 R putative export protein A for general secretion pathway (GSP); general secretory pathway component, cryptic complement(3453929..3455398) Escherichia coli str. K-12 substr. MG1655 947825 NP_417783.1 CDS gspC NC_000913.3 3455578 3456393 D general secretory pathway component, cryptic 3455578..3456393 Escherichia coli str. K-12 substr. MG1655 947824 NP_417784.4 CDS gspD NC_000913.3 3456377 3458329 D general secretory pathway component, cryptic 3456377..3458329 Escherichia coli str. K-12 substr. MG1655 947822 NP_417785.1 CDS gspE NC_000913.3 3458339 3459820 D general secretory pathway component, cryptic 3458339..3459820 Escherichia coli str. K-12 substr. MG1655 947823 NP_417786.1 CDS gspF NC_000913.3 3459817 3461013 D general secretory pathway component, cryptic 3459817..3461013 Escherichia coli str. K-12 substr. MG1655 947829 NP_417787.1 CDS gspG NC_000913.3 3461023 3461460 D pseudopilin, cryptic, general secretion pathway 3461023..3461460 Escherichia coli str. K-12 substr. MG1655 947827 NP_417788.1 CDS gspH NC_000913.3 3461468 3461977 D putative general secretory pathway component, cryptic 3461468..3461977 Escherichia coli str. K-12 substr. MG1655 947834 NP_417789.4 CDS gspI NC_000913.3 3461974 3462351 D general secretory pathway component, cryptic 3461974..3462351 Escherichia coli str. K-12 substr. MG1655 947833 NP_417790.1 CDS gspJ NC_000913.3 3462344 3462931 D putative general secretory pathway component, cryptic 3462344..3462931 Escherichia coli str. K-12 substr. MG1655 947832 NP_417791.1 CDS gspK NC_000913.3 3462924 3463907 D general secretory pathway component, cryptic 3462924..3463907 Escherichia coli str. K-12 substr. MG1655 947831 NP_417792.2 CDS gspL NC_000913.3 3463922 3465085 D general secretory pathway component, cryptic 3463922..3465085 Escherichia coli str. K-12 substr. MG1655 947842 NP_417793.2 CDS gspM NC_000913.3 3465082 3465543 D general secretory pathway component, cryptic 3465082..3465543 Escherichia coli str. K-12 substr. MG1655 947841 NP_417794.1 CDS gspO NC_000913.3 3465543 3466220 D bifunctional prepilin leader peptidase/ methylase 3465543..3466220 Escherichia coli str. K-12 substr. MG1655 947840 NP_417795.1 CDS bfr NC_000913.3 3466249 3466725 R bacterioferrin, an iron storage homoprotein; bacterioferritin, iron storage and detoxification protein complement(3466249..3466725) Escherichia coli str. K-12 substr. MG1655 947839 NP_417796.1 CDS bfd NC_000913.3 3466797 3466991 R bacterioferritin-associated ferredoxin complement(3466797..3466991) Escherichia coli str. K-12 substr. MG1655 947836 NP_417797.1 CDS chiA NC_000913.3 3467160 3469853 R periplasmic endochitinase complement(3467160..3469853) Escherichia coli str. K-12 substr. MG1655 947837 NP_417798.1 CDS tufA NC_000913.3 3470145 3471329 R translation elongation factor EF-Tu 1 complement(3470145..3471329) Escherichia coli str. K-12 substr. MG1655 947838 NP_417799.1 CDS fusA NC_000913.3 3471400 3473514 R GTP-binding protein chain elongation factor EF-G; protein chain elongation factor EF-G, GTP-binding complement(3471400..3473514) Escherichia coli str. K-12 substr. MG1655 947847 NP_417800.1 CDS rpsG NC_000913.3 3473542 3474081 R 30S ribosomal subunit protein S7, initiates assembly; 30S ribosomal subunit protein S7 complement(3473542..3474081) Escherichia coli str. K-12 substr. MG1655 947846 NP_417801.1 CDS rpsL NC_000913.3 3474178 3474552 R 30S ribosomal subunit protein S12 complement(3474178..3474552) Escherichia coli str. K-12 substr. MG1655 947845 NP_417802.1 CDS tusB NC_000913.3 3474678 3474965 R mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein complement(3474678..3474965) Escherichia coli str. K-12 substr. MG1655 947844 NP_417803.1 CDS tusC NC_000913.3 3474973 3475332 R mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein complement(3474973..3475332) Escherichia coli str. K-12 substr. MG1655 947853 NP_417804.1 CDS tusD NC_000913.3 3475332 3475718 R sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis complement(3475332..3475718) Escherichia coli str. K-12 substr. MG1655 947852 NP_417805.4 CDS yheO NC_000913.3 3475718 3476440 R putative PAS domain-containing DNA-binding transcriptional regulator complement(3475718..3476440) Escherichia coli str. K-12 substr. MG1655 947851 NP_417806.1 CDS fkpA NC_000913.3 3476607 3477419 R FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) complement(3476607..3477419) Escherichia coli str. K-12 substr. MG1655 947850 NP_417807.1 CDS slyX NC_000913.3 3477640 3477858 D host factor for lysis of phiX174 infection; phi X174 lysis protein 3477640..3477858 Escherichia coli str. K-12 substr. MG1655 947849 NP_417808.1 CDS slyD NC_000913.3 3477907 3478497 R FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase); FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) complement(3477907..3478497) Escherichia coli str. K-12 substr. MG1655 947859 YP_588468.1 CDS yheV NC_000913.3 3478592 3478792 R DUF2387 family putative metal-binding protein complement(3478592..3478792) Escherichia coli str. K-12 substr. MG1655 1450290 NP_417809.1 CDS kefB NC_000913.3 3478802 3480607 R K+ efflux; NEM-activable K+/H+ antiporter; potassium:proton antiporter complement(3478802..3480607) Escherichia coli str. K-12 substr. MG1655 947858 NP_417810.1 CDS kefG NC_000913.3 3480607 3481161 R putative NAD(P)H oxidoreductase; potassium-efflux system ancillary protein for KefB, glutathione-regulated complement(3480607..3481161) Escherichia coli str. K-12 substr. MG1655 947857 NP_417811.1 CDS yheS NC_000913.3 3481289 3483202 D putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component 3481289..3483202 Escherichia coli str. K-12 substr. MG1655 947856 NP_417812.1 CDS yheT NC_000913.3 3483202 3484224 D UPF0017 family putative hydrolase 3483202..3484224 Escherichia coli str. K-12 substr. MG1655 947855 NP_417813.1 CDS yheU NC_000913.3 3484218 3484436 D UPF0270 family protein 3484218..3484436 Escherichia coli str. K-12 substr. MG1655 947863 NP_417814.1 CDS prkB NC_000913.3 3484490 3485359 D probable phosphoribulokinase; putative phosphoribulokinase 3484490..3485359 Escherichia coli str. K-12 substr. MG1655 947862 NP_417815.1 CDS yhfA NC_000913.3 3485414 3485818 R OsmC family protein complement(3485414..3485818) Escherichia coli str. K-12 substr. MG1655 947860 NP_417816.1 CDS crp NC_000913.3 3486120 3486752 D cyclic AMP receptor protein; cAMP-activated global transcription factor, mediator of catabolite repression 3486120..3486752 Escherichia coli str. K-12 substr. MG1655 947867 NP_417817.2 CDS yhfK NC_000913.3 3486791 3488893 D putative transporter, FUSC superfamily inner membrane protein, tandem domains 3486791..3488893 Escherichia coli str. K-12 substr. MG1655 947866 NP_417818.1 CDS argD NC_000913.3 3488960 3490180 R acetylornithine delta-aminotransferase; bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase complement(3488960..3490180) Escherichia coli str. K-12 substr. MG1655 947864 NP_417819.1 CDS pabA NC_000913.3 3490266 3490829 R p-aminobenzoate synthetase, component II; aminodeoxychorismate synthase, subunit II complement(3490266..3490829) Escherichia coli str. K-12 substr. MG1655 947873 NP_417820.1 CDS fic NC_000913.3 3490861 3491463 R induced in stationary phase, recognized by rpoS, affects cell division; stationary-phase adenosine monophosphate-protein transferase domain protein complement(3490861..3491463) Escherichia coli str. K-12 substr. MG1655 947872 NP_417821.1 CDS yhfG NC_000913.3 3491453 3491620 R putative Fic-binding protein complement(3491453..3491620) Escherichia coli str. K-12 substr. MG1655 947871 NP_417822.1 CDS ppiA NC_000913.3 3491725 3492297 R peptidyl-prolyl cis-trans isomerase A (rotamase A) complement(3491725..3492297) Escherichia coli str. K-12 substr. MG1655 947870 NP_417823.1 CDS tsgA NC_000913.3 3492568 3493749 D putative transport; putative transporter 3492568..3493749 Escherichia coli str. K-12 substr. MG1655 947869 NP_417824.1 CDS nirB NC_000913.3 3494011 3496554 D nitrite reductase (NAD(P)H) subunit; nitrite reductase, large subunit, NAD(P)H-binding 3494011..3496554 Escherichia coli str. K-12 substr. MG1655 947868 NP_417825.1 CDS nirD NC_000913.3 3496551 3496877 D nitrite reductase (NAD(P)H) subunit; nitrite reductase, NAD(P)H-binding, small subunit 3496551..3496877 Escherichia coli str. K-12 substr. MG1655 947881 YP_026212.2 CDS nirC NC_000913.3 3497003 3497809 D nitrite reductase activity; nitrite transporter 3497003..3497809 Escherichia coli str. K-12 substr. MG1655 2847757 NP_417827.1 CDS cysG NC_000913.3 3497828 3499201 D uroporphyrinogen III methylase; sirohaeme biosynthesis; fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase 3497828..3499201 Escherichia coli str. K-12 substr. MG1655 947880 NP_417828.1 CDS yhfL NC_000913.3 3499448 3499615 D small lipoprotein 3499448..3499615 Escherichia coli str. K-12 substr. MG1655 947879 NP_417829.2 CDS frlA NC_000913.3 3499910 3501247 D putative amino acid/amine transport protein; putative fructoselysine transporter 3499910..3501247 Escherichia coli str. K-12 substr. MG1655 947878 NP_417830.4 CDS frlB NC_000913.3 3501268 3502290 D putative transport protein; fructoselysine-6-P-deglycase 3501268..3502290 Escherichia coli str. K-12 substr. MG1655 947875 YP_026213.1 CDS frlC NC_000913.3 3502340 3503170 D putative fructoselysine or fructoselysine 6-P isomerase; fructoselysine 3-epimerase 3502340..3503170 Escherichia coli str. K-12 substr. MG1655 2847758 NP_417833.1 CDS frlD NC_000913.3 3503167 3503952 D putative kinase; fructoselysine 6-kinase 3503167..3503952 Escherichia coli str. K-12 substr. MG1655 947886 NP_417834.6 CDS frlR NC_000913.3 3504052 3504783 D putative transcriptional regulator; putative DNA-binding transcriptional regulator 3504052..3504783 Escherichia coli str. K-12 substr. MG1655 947885 NP_417835.1 CDS yhfS NC_000913.3 3504935 3506020 R FNR-regulated pyridoxal phosphate-dependent aminotransferase family protein complement(3504935..3506020) Escherichia coli str. K-12 substr. MG1655 947884 NP_417836.1 CDS yhfT NC_000913.3 3506032 3507336 R putative transport system permease protein; inner membrane protein complement(3506032..3507336) Escherichia coli str. K-12 substr. MG1655 947883 NP_417837.2 CDS yhfU NC_000913.3 3507348 3507701 R DUF2620 family protein complement(3507348..3507701) Escherichia coli str. K-12 substr. MG1655 947892 NP_417838.1 CDS php NC_000913.3 3507712 3508590 R putative hydrolase; phosphotriesterase homology protein complement(3507712..3508590) Escherichia coli str. K-12 substr. MG1655 947891 NP_417839.1 CDS yhfW NC_000913.3 3508587 3509813 R putative mutase; phosphopentomutase-related metalloenzyme superfamily protein complement(3508587..3509813) Escherichia coli str. K-12 substr. MG1655 947890 NP_417840.1 CDS yhfX NC_000913.3 3509813 3510976 R putative pyridoxal 5'-phosphate binding protein complement(3509813..3510976) Escherichia coli str. K-12 substr. MG1655 947889 NP_417841.2 CDS yhfY NC_000913.3 3511060 3511422 R PRD domain protein complement(3511060..3511422) Escherichia coli str. K-12 substr. MG1655 947888 YP_026214.1 CDS yhfZ NC_000913.3 3511439 3512344 R putative DNA-binding transcriptional regulator complement(3511439..3512344) Escherichia coli str. K-12 substr. MG1655 947897 NP_417843.1 CDS trpS NC_000913.3 3512634 3513638 R tryptophan tRNA synthetase; tryptophanyl-tRNA synthetase complement(3512634..3513638) Escherichia coli str. K-12 substr. MG1655 947894 NP_417844.1 CDS gph NC_000913.3 3513631 3514389 R phosphoglycolate phosphatase complement(3513631..3514389) Escherichia coli str. K-12 substr. MG1655 947895 NP_417845.1 CDS rpe NC_000913.3 3514382 3515059 R D-ribulose-5-phosphate 3-epimerase complement(3514382..3515059) Escherichia coli str. K-12 substr. MG1655 947896 NP_417846.1 CDS dam NC_000913.3 3515077 3515913 R DNA adenine methyltransferase complement(3515077..3515913) Escherichia coli str. K-12 substr. MG1655 947893 NP_417847.1 CDS damX NC_000913.3 3516020 3517306 R putative membrane protein; interferes with cell division; cell division protein that binds to the septal ring complement(3516020..3517306) Escherichia coli str. K-12 substr. MG1655 947930 NP_417848.1 CDS aroB NC_000913.3 3517398 3518486 R 3-dehydroquinate synthase complement(3517398..3518486) Escherichia coli str. K-12 substr. MG1655 947927 YP_026215.2 CDS aroK NC_000913.3 3518543 3519064 R shikimate kinase I complement(3518543..3519064) Escherichia coli str. K-12 substr. MG1655 2847759 NP_417850.1 CDS hofQ NC_000913.3 3519465 3520703 R putative transport portein; DNA catabolic putative fimbrial transporter complement(3519465..3520703) Escherichia coli str. K-12 substr. MG1655 947901 NP_417851.4 CDS hofP NC_000913.3 3520615 3521019 R DNA catabolic protein complement(3520615..3521019) Escherichia coli str. K-12 substr. MG1655 947900 NP_417852.1 CDS hofO NC_000913.3 3521009 3521449 R DNA catabolic protein complement(3521009..3521449) Escherichia coli str. K-12 substr. MG1655 947899 NP_417853.1 CDS hofN NC_000913.3 3521433 3521972 R DNA catabolic putative fimbrial assembly protein complement(3521433..3521972) Escherichia coli str. K-12 substr. MG1655 947898 NP_417854.4 CDS hofM NC_000913.3 3521972 3522751 R DNA catabolic putative pilus assembly protein complement(3521972..3522751) Escherichia coli str. K-12 substr. MG1655 947908 NP_417855.4 CDS mrcA NC_000913.3 3522871 3525423 D peptidoglycan synthetase; penicillin-binding protein 1A; fused penicillin-binding protein 1a: murein transglycosylase/murein transpeptidase 3522871..3525423 Escherichia coli str. K-12 substr. MG1655 947907 NP_417856.1 CDS nudE NC_000913.3 3525589 3526149 R adenosine nucleotide hydrolase; substrates include Ap3A, Ap2A, ADP-ribose, NADH complement(3525589..3526149) Escherichia coli str. K-12 substr. MG1655 947906 NP_417857.1 CDS yrfF NC_000913.3 3526469 3528604 D putative dehydrogenase; inner membrane protein 3526469..3528604 Escherichia coli str. K-12 substr. MG1655 947905 NP_417858.4 CDS yrfG NC_000913.3 3528669 3529337 D putative phosphatase; GMP/IMP nucleotidase 3528669..3529337 Escherichia coli str. K-12 substr. MG1655 947904 NP_417859.1 CDS hslR NC_000913.3 3529348 3529749 D ribosome-associated heat shock protein Hsp15 3529348..3529749 Escherichia coli str. K-12 substr. MG1655 947912 NP_417860.2 CDS hslO NC_000913.3 3529774 3530652 D heat shock protein Hsp33 3529774..3530652 Escherichia coli str. K-12 substr. MG1655 947178 NP_417861.1 CDS yhgE NC_000913.3 3530715 3532439 R putative transport; DUF4153 family putative inner membrane protein complement(3530715..3532439) Escherichia coli str. K-12 substr. MG1655 947651 NP_417862.1 CDS pck NC_000913.3 3532818 3534440 D phosphoenolpyruvate carboxykinase 3532818..3534440 Escherichia coli str. K-12 substr. MG1655 945667 NP_417863.1 CDS envZ NC_000913.3 3534516 3535868 R protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC; sensory histidine kinase in two-component regulatory system with OmpR complement(3534516..3535868) Escherichia coli str. K-12 substr. MG1655 947272 NP_417864.1 CDS ompR NC_000913.3 3535865 3536584 R response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis; response regulator in two-component regulatory system with EnvZ complement(3535865..3536584) Escherichia coli str. K-12 substr. MG1655 947913 YP_026216.2 CDS greB NC_000913.3 3536812 3537288 D transcription elongation factor and transcript cleavage; transcript cleavage factor 3536812..3537288 Escherichia coli str. K-12 substr. MG1655 2847706 NP_417866.4 CDS yhgF NC_000913.3 3537385 3539706 D putative transcriptional accessory protein 3537385..3539706 Escherichia coli str. K-12 substr. MG1655 947911 NP_417867.1 CDS feoA NC_000913.3 3540163 3540390 D ferrous iron transport protein A; ferrous iron transporter, protein A 3540163..3540390 Escherichia coli str. K-12 substr. MG1655 947909 NP_417868.1 CDS feoB NC_000913.3 3540407 3542728 D ferrous iron transport protein B; fused ferrous iron transporter, protein B: GTP-binding protein/membrane protein 3540407..3542728 Escherichia coli str. K-12 substr. MG1655 947919 NP_417869.1 CDS feoC NC_000913.3 3542728 3542964 D putative DNA-binding transcriptional regulator 3542728..3542964 Escherichia coli str. K-12 substr. MG1655 947918 NP_417870.1 CDS yhgA NC_000913.3 3543167 3544045 D transposase_31 family protein 3543167..3544045 Escherichia coli str. K-12 substr. MG1655 947917 NP_417871.1 CDS bioH NC_000913.3 3544074 3544844 R biotin biosynthesis; reaction prior to pimeloyl CoA; pimeloyl-ACP methyl ester carboxylesterase complement(3544074..3544844) Escherichia coli str. K-12 substr. MG1655 947916 NP_417872.2 CDS gntX NC_000913.3 3544882 3545565 D DNA catabolic protein 3544882..3545565 Escherichia coli str. K-12 substr. MG1655 947915 NP_417873.1 CDS nfuA NC_000913.3 3545624 3546199 D Fe/S biogenesis protein; putative scaffold/chaperone for damaged Fe/S proteins 3545624..3546199 Escherichia coli str. K-12 substr. MG1655 947925 YP_026217.1 CDS gntT NC_000913.3 3546559 3547875 D high-affinity transport of gluconate / gluconate permease; gluconate transporter, high-affinity GNT I system 3546559..3547875 Escherichia coli str. K-12 substr. MG1655 947924 NP_417875.1 CDS malQ NC_000913.3 3547986 3550070 R 4-alpha-glucanotransferase (amylomaltase) complement(3547986..3550070) Escherichia coli str. K-12 substr. MG1655 947923 YP_026218.1 CDS malP NC_000913.3 3550080 3552473 R maltodextrin phosphorylase complement(3550080..3552473) Escherichia coli str. K-12 substr. MG1655 947922 NP_417877.1 CDS malT NC_000913.3 3553085 3555790 D positive regulator of mal regulon; mal regulon transcriptional activator 3553085..3555790 Escherichia coli str. K-12 substr. MG1655 947921 YP_026219.1 CDS rtcA NC_000913.3 3555833 3556849 R RNA 3'-terminal phosphate cyclase complement(3555833..3556849) Escherichia coli str. K-12 substr. MG1655 2847707 NP_417879.1 CDS rtcB NC_000913.3 3556853 3558079 R RNA-splicing ligase complement(3556853..3558079) Escherichia coli str. K-12 substr. MG1655 947929 NP_417880.1 CDS rtcR NC_000913.3 3558268 3559866 D sigma54-dependent regulator of rtcBA expression; sigma 54-dependent transcriptional regulator of rtcBA expression 3558268..3559866 Escherichia coli str. K-12 substr. MG1655 947928 b3423 CDS glpR NC_000913.3 3559848 3560605 R pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon; complement(join(3559848..3560453,3560456..3560605)) Escherichia coli str. K-12 substr. MG1655 947926 YP_026220.1 CDS glpG NC_000913.3 3560622 3561452 R protein of glp regulon; rhomboid intramembrane serine protease complement(3560622..3561452) Escherichia coli str. K-12 substr. MG1655 947936 NP_417883.1 CDS glpE NC_000913.3 3561497 3561823 R rhodanese (thiosulfate:cyanide sulfertransferase); thiosulfate:cyanide sulfurtransferase (rhodanese) complement(3561497..3561823) Escherichia coli str. K-12 substr. MG1655 947935 NP_417884.1 CDS glpD NC_000913.3 3562013 3563518 D sn-glycerol-3-phosphate dehydrogenase (aerobic); sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding 3562013..3563518 Escherichia coli str. K-12 substr. MG1655 947934 b3427 CDS yzgL NC_000913.3 3563787 3564005 R pseudogene, periplasmic solute binding protein homology; complement(3563787..3564005) Escherichia coli str. K-12 substr. MG1655 947933 NP_417886.1 CDS glgP NC_000913.3 3564134 3566581 R glycogen phosphorylase complement(3564134..3566581) Escherichia coli str. K-12 substr. MG1655 947931 NP_417887.1 CDS glgA NC_000913.3 3566600 3568033 R glycogen synthase complement(3566600..3568033) Escherichia coli str. K-12 substr. MG1655 947932 NP_417888.1 CDS glgC NC_000913.3 3568033 3569328 R glucose-1-phosphate adenylyltransferase complement(3568033..3569328) Escherichia coli str. K-12 substr. MG1655 947942 NP_417889.1 CDS glgX NC_000913.3 3569346 3571319 R part of glycogen operon, a glycosyl hydrolase, debranching enzyme; glycogen debranching enzyme complement(3569346..3571319) Escherichia coli str. K-12 substr. MG1655 947941 NP_417890.1 CDS glgB NC_000913.3 3571316 3573502 R 1,4-alpha-glucan branching enzyme complement(3571316..3573502) Escherichia coli str. K-12 substr. MG1655 947940 NP_417891.1 CDS asd NC_000913.3 3573775 3574878 R aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase, NAD(P)-binding complement(3573775..3574878) Escherichia coli str. K-12 substr. MG1655 947939 NP_417892.1 CDS yhgN NC_000913.3 3575071 3575664 D UPF0056 family inner membrane protein 3575071..3575664 Escherichia coli str. K-12 substr. MG1655 947938 YP_026221.1 CDS gntU NC_000913.3 3575721 3577061 R split gene, low-affinity gluconate transport permease protein in GNT I system; gluconate transporter, low affinity GNT 1 system complement(3575721..3577061) Escherichia coli str. K-12 substr. MG1655 2847760 NP_417894.2 CDS gntK NC_000913.3 3577065 3577592 R gluconokinase 2, thermoresistant; gluconate transport, GNT I system; gluconate kinase 2 complement(3577065..3577592) Escherichia coli str. K-12 substr. MG1655 947937 YP_026222.1 CDS gntR NC_000913.3 3577731 3578726 R regulator of gluconate (gnt) operon; d-gluconate inducible gluconate regulon transcriptional repressor complement(3577731..3578726) Escherichia coli str. K-12 substr. MG1655 947946 NP_417896.1 CDS yhhW NC_000913.3 3578950 3579645 R quercetinase activity in vitro complement(3578950..3579645) Escherichia coli str. K-12 substr. MG1655 947945 NP_417897.1 CDS yhhX NC_000913.3 3579768 3580805 R putative regulator; putative oxidoreductase complement(3579768..3580805) Escherichia coli str. K-12 substr. MG1655 947944 NP_417898.1 CDS yhhY NC_000913.3 3581138 3581626 D putative acetyltransferase 3581138..3581626 Escherichia coli str. K-12 substr. MG1655 947943 NP_417899.1 CDS yhhZ NC_000913.3 3581863 3583041 D putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity 3581863..3583041 Escherichia coli str. K-12 substr. MG1655 947952 b3443 CDS yrhA NC_000913.3 3583038 3584309 D pseudogene, interrupted by IS1E; join(3583038..3583418,3584196..3584309) Escherichia coli str. K-12 substr. MG1655 947951 NP_417901.1 CDS insA NC_000913.3 3583483 3583758 D IS1 repressor TnpA 3583483..3583758 Escherichia coli str. K-12 substr. MG1655 947950 NP_417902.1 CDS insB1 NC_000913.3 3583677 3584180 D IS1 transposase B 3583677..3584180 Escherichia coli str. K-12 substr. MG1655 947949 NP_417903.1 CDS yrhB NC_000913.3 3584759 3585043 D stable heat shock chaperone 3584759..3585043 Escherichia coli str. K-12 substr. MG1655 947948 NP_417904.1 CDS ggt NC_000913.3 3585081 3586823 R gamma-glutamyltranspeptidase complement(3585081..3586823) Escherichia coli str. K-12 substr. MG1655 947947 NP_417905.1 CDS yhhA NC_000913.3 3586943 3587383 D DUF2756 family protein 3586943..3587383 Escherichia coli str. K-12 substr. MG1655 947956 NP_417906.1 CDS ugpQ NC_000913.3 3587370 3588113 R glycerophosphodiester phosphodiesterase, cytosolic complement(3587370..3588113) Escherichia coli str. K-12 substr. MG1655 947955 NP_417907.2 CDS ugpC NC_000913.3 3588110 3589180 R ATP-binding component of sn-glycerol 3-phosphate transport system; glycerol-3-phosphate transporter subunit complement(3588110..3589180) Escherichia coli str. K-12 substr. MG1655 947953 NP_417908.1 CDS ugpE NC_000913.3 3589182 3590027 R sn-glycerol 3-phosphate transport system, integral membrane protein; membrane component of ABC superfamily; glycerol-3-phosphate transporter subunit complement(3589182..3590027) Escherichia coli str. K-12 substr. MG1655 947959 NP_417909.1 CDS ugpA NC_000913.3 3590024 3590911 R sn-glycerol 3-phosphate transport system, integral membrane protein; membrane component of ABC superfamily; glycerol-3-phosphate transporter subunit complement(3590024..3590911) Escherichia coli str. K-12 substr. MG1655 947957 NP_417910.1 CDS ugpB NC_000913.3 3591009 3592325 R sn-glycerol 3-phosphate transport system; periplasmic binding protein; periplasmic-binding component of ABC superfamily; glycerol-3-phosphate transporter subunit complement(3591009..3592325) Escherichia coli str. K-12 substr. MG1655 947962 NP_417911.4 CDS livF NC_000913.3 3592724 3593437 R ATP-binding component of leucine transport; leucine/isoleucine/valine transporter subunit complement(3592724..3593437) Escherichia coli str. K-12 substr. MG1655 947961 NP_417912.1 CDS livG NC_000913.3 3593439 3594206 R ATP-binding component of high-affinity branched-chain amino acid transport system; leucine/isoleucine/valine transporter subunit complement(3593439..3594206) Escherichia coli str. K-12 substr. MG1655 947967 NP_417913.1 CDS livM NC_000913.3 3594203 3595480 R high-affinity branched-chain amino acid transport; membrane component of ABC superfamily; leucine/isoleucine/valine transporter subunit complement(3594203..3595480) Escherichia coli str. K-12 substr. MG1655 947966 NP_417914.1 CDS livH NC_000913.3 3595477 3596403 R high-affinity branched-chain amino acid transport system; membrane component; membrane component of ABC superfamily; leucine/isoleucine/valine transporter subunit complement(3595477..3596403) Escherichia coli str. K-12 substr. MG1655 947965 NP_417915.1 CDS livK NC_000913.3 3596451 3597560 R high-affinity leucine-specific transport system; periplasmic binding protein; periplasmic-binding component of ABC superfamily; leucine transporter subunit complement(3596451..3597560) Escherichia coli str. K-12 substr. MG1655 947964 NP_417916.1 CDS panM NC_000913.3 3597984 3598367 D PanD autocleavage accelerator, panothenate synthesis 3597984..3598367 Escherichia coli str. K-12 substr. MG1655 947963 YP_026223.1 CDS livJ NC_000913.3 3598555 3599658 R high-affinity branched-chain amino acid transport protein (ABC superfamily, peri_bind); periplasmic-binding component of ABC superfamily; leucine/isoleucine/valine transporter subunit complement(3598555..3599658) Escherichia coli str. K-12 substr. MG1655 947971 NP_417918.1 CDS rpoH NC_000913.3 3599929 3600783 R RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures; RNA polymerase, sigma 32 (sigma H) factor complement(3599929..3600783) Escherichia coli str. K-12 substr. MG1655 947970 NP_417919.1 CDS ftsX NC_000913.3 3601028 3602086 R cell division membrane protein; inner membrane putative ABC superfamily transporter permease complement(3601028..3602086) Escherichia coli str. K-12 substr. MG1655 947969 NP_417920.1 CDS ftsE NC_000913.3 3602079 3602747 R ATP-binding component of a membrane-associated complex involved in cell division; putative ABC superfamily transporter ATP-binding subunit complement(3602079..3602747) Escherichia coli str. K-12 substr. MG1655 947968 NP_417921.1 CDS ftsY NC_000913.3 3602750 3604243 R cell division membrane protein; Signal Recognition Particle (SRP) receptor complement(3602750..3604243) Escherichia coli str. K-12 substr. MG1655 947978 NP_417922.1 CDS rsmD NC_000913.3 3604393 3604989 D 16S rRNA m(2)G966 methyltransferase, SAM-dependent 3604393..3604989 Escherichia coli str. K-12 substr. MG1655 947977 NP_417923.1 CDS yhhL NC_000913.3 3604979 3605248 D DUF1145 family protein 3604979..3605248 Escherichia coli str. K-12 substr. MG1655 947976 NP_417924.1 CDS yhhM NC_000913.3 3605251 3605610 R putative receptor; DUF2500 family protein complement(3605251..3605610) Escherichia coli str. K-12 substr. MG1655 947975 NP_417925.1 CDS yhhN NC_000913.3 3605751 3606377 D putative enzyme; TMEM86 family putative inner membrane protein 3605751..3606377 Escherichia coli str. K-12 substr. MG1655 947973 NP_417926.1 CDS zntA NC_000913.3 3606451 3608649 D zinc-transporting ATPase; zinc, cobalt and lead efflux system 3606451..3608649 Escherichia coli str. K-12 substr. MG1655 947972 NP_417927.1 CDS tusA NC_000913.3 3608751 3608996 R small protein required for cell growth; affects RpoS stability; small ubiquitous RNA-binding protein required for normal growth, cytoplasmic; mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase complement(3608751..3608996) Escherichia coli str. K-12 substr. MG1655 947974 NP_417928.1 CDS yhhQ NC_000913.3 3609217 3609882 D DUF165 family inner membrane protein 3609217..3609882 Escherichia coli str. K-12 substr. MG1655 947984 NP_417929.4 CDS dcrB NC_000913.3 3609955 3610512 D putative lipoprotein 3609955..3610512 Escherichia coli str. K-12 substr. MG1655 947983 NP_417930.2 CDS yhhS NC_000913.3 3610516 3611733 R putative transport; putative arabinose efflux transporter complement(3610516..3611733) Escherichia coli str. K-12 substr. MG1655 947982 NP_417931.4 CDS yhhT NC_000913.3 3611865 3612914 D UPF0118 family putative transporter 3611865..3612914 Escherichia coli str. K-12 substr. MG1655 947980 NP_417932.1 CDS acpT NC_000913.3 3612969 3613556 D 4'-phosphopantetheinyl transferase 3612969..3613556 Escherichia coli str. K-12 substr. MG1655 947979 NP_417933.1 CDS nikA NC_000913.3 3613667 3615241 D periplasmic binding protein for nickel; periplasmic-binding component of ABC superfamily; nickel-binding, heme-binding periplasmic protein 3613667..3615241 Escherichia coli str. K-12 substr. MG1655 947981 NP_417934.1 CDS nikB NC_000913.3 3615241 3616185 D transport of nickel, membrane protein; membrane component of ABC superfamily; nickel transporter subunit 3615241..3616185 Escherichia coli str. K-12 substr. MG1655 947986 NP_417935.1 CDS nikC NC_000913.3 3616182 3617015 D transport of nickel, membrane protein; membrane component of ABC superfamily; nickel transporter subunit 3616182..3617015 Escherichia coli str. K-12 substr. MG1655 947990 NP_417936.1 CDS nikD NC_000913.3 3617015 3617779 D ATP-binding protein of nickel transport system; ATP-binding component of ABC superfamily; nickel transporter subunit 3617015..3617779 Escherichia coli str. K-12 substr. MG1655 947989 NP_417937.1 CDS nikE NC_000913.3 3617776 3618582 D ATP-binding protein of nickel transport system; ATP-binding component of ABC superfamily; nickel transporter subunit 3617776..3618582 Escherichia coli str. K-12 substr. MG1655 947987 NP_417938.1 CDS nikR NC_000913.3 3618588 3618989 D transcriptional repressor, Ni-binding 3618588..3618989 Escherichia coli str. K-12 substr. MG1655 947995 YP_026224.1 CDS rhsB NC_000913.3 3619192 3623427 D rhsB protein in rhs element; Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor 3619192..3623427 Escherichia coli str. K-12 substr. MG1655 947994 NP_417940.2 CDS yhhH NC_000913.3 3623399 3623782 D putative immunity protein for putative polymorphic toxin RhsB 3623399..3623782 Escherichia coli str. K-12 substr. MG1655 947993 b4552 CDS yrhC NC_000913.3 3623887 3624237 D pseudogene fragment; 3623887..3624237 Escherichia coli str. K-12 substr. MG1655 1450291 NP_417941.1 CDS yhhI NC_000913.3 3624378 3625514 D putative receptor; putative transposase 3624378..3625514 Escherichia coli str. K-12 substr. MG1655 947992 NP_417942.6 CDS yhhJ NC_000913.3 3625679 3626803 R putative transporter; inner membrane putative ABC transporter permease complement(3625679..3626803) Escherichia coli str. K-12 substr. MG1655 947991 YP_026225.1 CDS rbbA NC_000913.3 3626803 3629538 R ribosome-associated ATPase, ATP-binding domain (N-terminal); ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein complement(3626803..3629538) Escherichia coli str. K-12 substr. MG1655 947998 NP_417944.1 CDS yhiI NC_000913.3 3629535 3630602 R putative membrane protein; putative membrane fusion protein (MFP) of efflux pump complement(3629535..3630602) Escherichia coli str. K-12 substr. MG1655 948003 NP_417945.1 CDS yhiJ NC_000913.3 3630968 3632590 R DUF4049 family protein complement(3630968..3632590) Escherichia coli str. K-12 substr. MG1655 948001 b4660 CDS yhiL NC_000913.3 3632852 3634458 R pseudogene, DUF4049 family protein; complement(join(3632852..3633265,3633265..3634458)) Escherichia coli str. K-12 substr. MG1655 947999 NP_417948.4 CDS yhiM NC_000913.3 3634841 3635893 D acid resistance protein, inner membrane 3634841..3635893 Escherichia coli str. K-12 substr. MG1655 947997 NP_417949.1 CDS yhiN NC_000913.3 3636208 3637410 R putative oxidoreductase complement(3636208..3637410) Escherichia coli str. K-12 substr. MG1655 947996 NP_417950.1 CDS pitA NC_000913.3 3637642 3639141 D low-affinity phosphate transport; phosphate transporter, low-affinity; tellurite importer 3637642..3639141 Escherichia coli str. K-12 substr. MG1655 948009 NP_417951.1 CDS uspB NC_000913.3 3639385 3639720 R universal stress (ethanol tolerance) protein B complement(3639385..3639720) Escherichia coli str. K-12 substr. MG1655 948008 NP_417952.1 CDS uspA NC_000913.3 3640111 3640545 D universal stress protein; broad regulatory function?; universal stress global response regulator 3640111..3640545 Escherichia coli str. K-12 substr. MG1655 948007 NP_417953.1 CDS dtpB NC_000913.3 3640862 3642331 D putative transport protein; dipeptide and tripeptide permease B 3640862..3642331 Escherichia coli str. K-12 substr. MG1655 948006 NP_417954.1 CDS rsmJ NC_000913.3 3642380 3643132 R 16S rRNA m(2)G1516 methyltransferase, SAM-dependent complement(3642380..3643132) Escherichia coli str. K-12 substr. MG1655 948005 NP_417955.1 CDS prlC NC_000913.3 3643140 3645182 R oligopeptidase A complement(3643140..3645182) Escherichia coli str. K-12 substr. MG1655 948016 NP_417956.1 CDS rlmJ NC_000913.3 3645385 3646227 D 23S rRNA m(6)A2030 methyltransferase, SAM-dependent 3645385..3646227 Escherichia coli str. K-12 substr. MG1655 948012 NP_417957.1 CDS gor NC_000913.3 3646299 3647651 D glutathione oxidoreductase 3646299..3647651 Escherichia coli str. K-12 substr. MG1655 948014 YP_001165328.2 CDS dinQ NC_000913.3 3647705 3647788 R UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system complement(3647705..3647788) Escherichia coli str. K-12 substr. MG1655 5061522 NP_417958.1 CDS arsR NC_000913.3 3648528 3648881 D transcriptional repressor of chromosomal ars operon; arsenical resistance operon transcriptional repressor; autorepressor 3648528..3648881 Escherichia coli str. K-12 substr. MG1655 948013 NP_417959.4 CDS arsB NC_000913.3 3648935 3650224 D arsenical pump membrane protein; arsenite/antimonite transporter 3648935..3650224 Escherichia coli str. K-12 substr. MG1655 948011 NP_417960.1 CDS arsC NC_000913.3 3650237 3650662 D arsenate reductase 3650237..3650662 Escherichia coli str. K-12 substr. MG1655 948018 b3504 CDS yhiS NC_000913.3 3651291 3653713 D pseudogene; join(3651291..3652031,3653231..3653713) Escherichia coli str. K-12 substr. MG1655 948017 NP_417962.1 CDS insH1 NC_000913.3 3652182 3653198 R IS5 transposase and trans-activator complement(3652182..3653198) Escherichia coli str. K-12 substr. MG1655 948015 NP_417963.4 CDS slp NC_000913.3 3653961 3654527 D outer membrane protein induced after carbon starvation; outer membrane lipoprotein 3653961..3654527 Escherichia coli str. K-12 substr. MG1655 948022 NP_417964.1 CDS dctR NC_000913.3 3654683 3655213 D LuxR family putative transcriptional regulator 3654683..3655213 Escherichia coli str. K-12 substr. MG1655 948021 NP_417965.1 CDS yhiD NC_000913.3 3655255 3655902 R putative transport ATPase; putative Mg(2+) transport ATPase, inner membrane protein complement(3655255..3655902) Escherichia coli str. K-12 substr. MG1655 948019 NP_417966.4 CDS hdeB NC_000913.3 3655966 3656292 R acid-resistance protein complement(3655966..3656292) Escherichia coli str. K-12 substr. MG1655 948026 NP_417967.1 CDS hdeA NC_000913.3 3656408 3656740 R stress response protein acid-resistance protein complement(3656408..3656740) Escherichia coli str. K-12 substr. MG1655 948025 NP_417968.1 CDS hdeD NC_000913.3 3656995 3657567 D acid-resistance membrane protein 3656995..3657567 Escherichia coli str. K-12 substr. MG1655 948024 NP_417969.1 CDS gadE NC_000913.3 3658366 3658893 D gad regulon transcriptional activator 3658366..3658893 Escherichia coli str. K-12 substr. MG1655 948023 NP_417970.1 CDS mdtE NC_000913.3 3659232 3660389 D putative membrane protein; anaerobic multidrug efflux transporter, ArcA-regulated 3659232..3660389 Escherichia coli str. K-12 substr. MG1655 948031 NP_417971.1 CDS mdtF NC_000913.3 3660414 3663527 D putative transport system permease protein; anaerobic multidrug efflux transporter, ArcA-regulated 3660414..3663527 Escherichia coli str. K-12 substr. MG1655 948030 NP_417972.1 CDS gadW NC_000913.3 3663890 3664618 R putative ARAC-type regulatory protein; transcriptional activator of gadA and gadBC; repressor of gadX complement(3663890..3664618) Escherichia coli str. K-12 substr. MG1655 948029 NP_417973.1 CDS gadX NC_000913.3 3664986 3665810 R acid resistance regulon transcriptional activator; autoactivator complement(3664986..3665810) Escherichia coli str. K-12 substr. MG1655 948028 NP_417974.1 CDS gadA NC_000913.3 3666180 3667580 R glutamate decarboxylase isozyme; glutamate decarboxylase A, PLP-dependent complement(3666180..3667580) Escherichia coli str. K-12 substr. MG1655 948027 NP_417975.1 CDS yhjA NC_000913.3 3667791 3669188 R putative cytochrome C peroxidase complement(3667791..3669188) Escherichia coli str. K-12 substr. MG1655 948038 NP_417976.1 CDS treF NC_000913.3 3669592 3671241 D cytoplasmic trehalase 3669592..3671241 Escherichia coli str. K-12 substr. MG1655 948037 NP_417977.1 CDS yhjB NC_000913.3 3671292 3671894 R putative regulator; putative DNA-binding transcriptional response regulator complement(3671292..3671894) Escherichia coli str. K-12 substr. MG1655 948036 NP_417978.2 CDS yhjC NC_000913.3 3672414 3673313 D putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 3672414..3673313 Escherichia coli str. K-12 substr. MG1655 948035 NP_417979.1 CDS yhjD NC_000913.3 3673362 3674375 D inner membrane putative BrbK family alternate lipid exporter 3673362..3674375 Escherichia coli str. K-12 substr. MG1655 948033 NP_417980.1 CDS yhjE NC_000913.3 3674786 3676108 D putative transport protein; MFS superfamily sugar transport 1 family protein 3674786..3676108 Escherichia coli str. K-12 substr. MG1655 948032 NP_417981.2 CDS yhjG NC_000913.3 3676290 3678350 R putative inner membrane-anchored periplasmic AsmA family protein complement(3676290..3678350) Escherichia coli str. K-12 substr. MG1655 948043 NP_417982.2 CDS yhjH NC_000913.3 3678420 3679187 R cyclic-di-GMP phosphodiesterase, FlhDC-regulated complement(3678420..3679187) Escherichia coli str. K-12 substr. MG1655 948042 NP_417983.2 CDS kdgK NC_000913.3 3679419 3680348 D 2-dehydro-3-deoxygluconokinase 3679419..3680348 Escherichia coli str. K-12 substr. MG1655 948041 NP_417984.1 CDS yhjJ NC_000913.3 3680444 3681940 R putative periplasmic M16 family chaperone complement(3680444..3681940) Escherichia coli str. K-12 substr. MG1655 948040 NP_417985.1 CDS dctA NC_000913.3 3682161 3683447 R uptake of C4-dicarboxylic acids; C4-dicarboxylic acid, orotate and citrate transporter complement(3682161..3683447) Escherichia coli str. K-12 substr. MG1655 948039 NP_417986.4 CDS yhjK NC_000913.3 3683630 3685618 R cyclic-di-GMP phosphodiesterase complement(3683630..3685618) Escherichia coli str. K-12 substr. MG1655 948048 YP_026226.4 CDS bcsC NC_000913.3 3685700 3689173 R putative oxidoreductase subunit; cellulose synthase subunit complement(3685700..3689173) Escherichia coli str. K-12 substr. MG1655 948047 NP_417988.1 CDS bcsZ NC_000913.3 3689155 3690261 R endo-1,4-D-glucanase complement(3689155..3690261) Escherichia coli str. K-12 substr. MG1655 948046 NP_417989.1 CDS bcsB NC_000913.3 3690268 3692607 R regulator of cellulose synthase, cyclic di-GMP binding complement(3690268..3692607) Escherichia coli str. K-12 substr. MG1655 948045 NP_417990.4 CDS bcsA NC_000913.3 3692618 3695236 R putative cellulose synthase; cellulose synthase, catalytic subunit complement(3692618..3695236) Escherichia coli str. K-12 substr. MG1655 948053 b3534 CDS bcsQ NC_000913.3 3695233 3695985 R involved in cellulose production, minD superfamily (pseudogene); complement(3695233..3695985) Escherichia coli str. K-12 substr. MG1655 948052 NP_417992.1 CDS yhjR NC_000913.3 3695997 3696185 R DUF2629 family protein complement(3695997..3696185) Escherichia coli str. K-12 substr. MG1655 948051 NP_417993.1 CDS bcsE NC_000913.3 3696458 3698029 D conserved hypothetical protein; Salmonella ortholog implicated in the biosynthesis of cellulose, although the precise role remains unclear; cellulose production protein 3696458..3698029 Escherichia coli str. K-12 substr. MG1655 948050 NP_417994.2 CDS bcsF NC_000913.3 3698026 3698217 D DUF2636 family small membrane protein associated with cellulose production 3698026..3698217 Escherichia coli str. K-12 substr. MG1655 948059 NP_417995.1 CDS bcsG NC_000913.3 3698214 3699893 D DUF3260 family inner membrane protein associated with cellulose production 3698214..3699893 Escherichia coli str. K-12 substr. MG1655 948058 YP_026227.1 CDS ldrD NC_000913.3 3699980 3700087 R small toxic polypeptide; toxic polypeptide, small complement(3699980..3700087) Escherichia coli str. K-12 substr. MG1655 2847730 NP_417996.1 CDS yhjV NC_000913.3 3700563 3701834 D putative transporter protein; putative transporter 3700563..3701834 Escherichia coli str. K-12 substr. MG1655 948057 NP_417997.1 CDS dppF NC_000913.3 3701864 3702868 R putative ATP-binding component of dipeptide transport system; dipeptide transporter complement(3701864..3702868) Escherichia coli str. K-12 substr. MG1655 948056 NP_417998.1 CDS dppD NC_000913.3 3702865 3703848 R putative ATP-binding component of dipeptide transport system; dipeptide/heme transporter complement(3702865..3703848) Escherichia coli str. K-12 substr. MG1655 948065 NP_417999.1 CDS dppC NC_000913.3 3703859 3704761 R dipeptide transport system permease protein 2; membrane component of ABC superfamily; dipeptide/heme transporter complement(3703859..3704761) Escherichia coli str. K-12 substr. MG1655 948064 NP_418000.1 CDS dppB NC_000913.3 3704771 3705790 R dipeptide transport system permease protein 1; membrane component of ABC superfamily; dipeptide/heme transporter complement(3704771..3705790) Escherichia coli str. K-12 substr. MG1655 948063 NP_418001.1 CDS dppA NC_000913.3 3706098 3707705 R dipeptide transport protein; periplasmic-binding component of ABC superfamily; dipeptide transporter complement(3706098..3707705) Escherichia coli str. K-12 substr. MG1655 948062 NP_418002.2 CDS eptB NC_000913.3 3708784 3710475 R KDO phosphoethanolamine transferase, Ca(2+)-inducible complement(3708784..3710475) Escherichia coli str. K-12 substr. MG1655 948068 NP_418003.1 CDS yhjX NC_000913.3 3710799 3712007 R putative resistance protein; pyruvate-inducible inner membrane protein, putative transporter complement(3710799..3712007) Escherichia coli str. K-12 substr. MG1655 948066 NP_418004.4 CDS yhjY NC_000913.3 3712236 3712934 R putative lipase; autotransporter beta-domain protein complement(3712236..3712934) Escherichia coli str. K-12 substr. MG1655 948073 NP_418005.1 CDS tag NC_000913.3 3713092 3713655 D 3-methyl-adenine DNA glycosylase I, constitutive 3713092..3713655 Escherichia coli str. K-12 substr. MG1655 947137 NP_418006.1 CDS yiaC NC_000913.3 3713652 3714092 D putative acyl-CoA transferase 3713652..3714092 Escherichia coli str. K-12 substr. MG1655 946460 NP_418007.3 CDS bisC NC_000913.3 3714061 3716394 R biotin sulfoxide reductase complement(3714061..3716394) Escherichia coli str. K-12 substr. MG1655 946915 YP_026228.1 CDS yiaD NC_000913.3 3716547 3717206 D putative outer membrane protein; multicopy suppressor of bamB; outer membrane lipoprotein 3716547..3717206 Escherichia coli str. K-12 substr. MG1655 948075 NP_418009.2 CDS ghrB NC_000913.3 3717310 3718284 D glyoxylate/hydroxypyruvate reductase B 3717310..3718284 Escherichia coli str. K-12 substr. MG1655 948074 NP_418010.2 CDS yiaF NC_000913.3 3718334 3719044 R barrier effect co-colonization resistance factor; DUF3053 family lipoprotein complement(3718334..3719044) Escherichia coli str. K-12 substr. MG1655 948072 NP_418011.1 CDS yiaG NC_000913.3 3719478 3719768 D HTH_CROC1 family putative transcriptional regulator 3719478..3719768 Escherichia coli str. K-12 substr. MG1655 948071 NP_418012.1 CDS cspA NC_000913.3 3720049 3720261 D cold shock protein 7.4, transcriptional activator of hns; RNA chaperone and antiterminator, cold-inducible 3720049..3720261 Escherichia coli str. K-12 substr. MG1655 948070 b4647 CDS mokA NC_000913.3 3720448 3720632 R pseudogene, overlapping regulatory peptide, enables hokB; completely contained in another CDS; complement(3720448..3720632) Escherichia coli str. K-12 substr. MG1655 5625573 YP_026229.1 CDS hokA NC_000913.3 3720448 3720600 R small toxic membrane polypeptide; IS150 insertion and apparent 39 bp deletion disrupt the associated mokA and sokA genes; completely contained in another CDS; toxic polypeptide, small complement(3720448..3720600) Escherichia coli str. K-12 substr. MG1655 2847732 NP_418014.1 CDS insJ NC_000913.3 3720680 3721201 D IS150 transposase A 3720680..3721201 Escherichia coli str. K-12 substr. MG1655 948082 NP_418015.1 CDS insK NC_000913.3 3721198 3722049 D IS150 transposase B 3721198..3722049 Escherichia coli str. K-12 substr. MG1655 948081 NP_418016.1 CDS glyS NC_000913.3 3722328 3724397 R glycine tRNA synthetase, beta subunit complement(3722328..3724397) Escherichia coli str. K-12 substr. MG1655 948080 NP_418017.1 CDS glyQ NC_000913.3 3724407 3725318 R glycine tRNA synthetase, alpha subunit complement(3724407..3725318) Escherichia coli str. K-12 substr. MG1655 948079 YP_588469.1 CDS ysaB NC_000913.3 3725413 3725712 R uncharacterized protein complement(3725413..3725712) Escherichia coli str. K-12 substr. MG1655 1450292 NP_418018.1 CDS wecH NC_000913.3 3725887 3726882 D O-acetyltransferase for enterobacterial common antigen (ECA) 3725887..3726882 Escherichia coli str. K-12 substr. MG1655 948077 NP_418019.4 CDS yiaA NC_000913.3 3726924 3727361 R YiaAB family inner membrane protein, tandem domains complement(3726924..3727361) Escherichia coli str. K-12 substr. MG1655 948078 NP_418020.2 CDS yiaB NC_000913.3 3727407 3727748 R YiaAB family inner membrane protein complement(3727407..3727748) Escherichia coli str. K-12 substr. MG1655 948152 NP_418021.1 CDS xylB NC_000913.3 3727917 3729371 R xylulokinase complement(3727917..3729371) Escherichia coli str. K-12 substr. MG1655 948133 NP_418022.1 CDS xylA NC_000913.3 3729443 3730765 R D-xylose isomerase complement(3729443..3730765) Escherichia coli str. K-12 substr. MG1655 948141 NP_418023.1 CDS xylF NC_000913.3 3731131 3732123 D xylose binding protein transport system; periplasmic-binding component of ABC superfamily; D-xylose transporter subunit 3731131..3732123 Escherichia coli str. K-12 substr. MG1655 948090 NP_418024.1 CDS xylG NC_000913.3 3732201 3733742 D putative ATP-binding protein of xylose transport system; fused D-xylose transporter subunits of ABC superfamily: ATP-binding components 3732201..3733742 Escherichia coli str. K-12 substr. MG1655 948127 NP_418025.1 CDS xylH NC_000913.3 3733720 3734901 D putative xylose transport, membrane component; membrane component of ABC superfamily; D-xylose ABC transporter permease subunit 3733720..3734901 Escherichia coli str. K-12 substr. MG1655 948083 NP_418026.1 CDS xylR NC_000913.3 3734979 3736157 D putative regulator of xyl operon; xylose divergent operon transcriptional activator 3734979..3736157 Escherichia coli str. K-12 substr. MG1655 948086 YP_026230.1 CDS bax NC_000913.3 3736353 3737177 R putative ATP-binding protein; putative glucosaminidase complement(3736353..3737177) Escherichia coli str. K-12 substr. MG1655 948089 NP_418028.1 CDS malS NC_000913.3 3737497 3739527 D alpha-amylase 3737497..3739527 Escherichia coli str. K-12 substr. MG1655 948088 YP_026231.1 CDS avtA NC_000913.3 3739705 3740958 D alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase C; valine-pyruvate aminotransferase 1 3739705..3740958 Escherichia coli str. K-12 substr. MG1655 948087 NP_418030.1 CDS ysaA NC_000913.3 3741109 3741582 R putative hydrogenase, 4Fe-4S ferredoxin-type component complement(3741109..3741582) Escherichia coli str. K-12 substr. MG1655 948085 NP_418031.1 CDS yiaJ NC_000913.3 3741684 3742532 R transcriptional repressor of yiaK-S operon complement(3741684..3742532) Escherichia coli str. K-12 substr. MG1655 948084 NP_418032.1 CDS yiaK NC_000913.3 3742733 3743731 D putative dehydrogenase; 2,3-diketo-L-gulonate reductase, NADH-dependent 3742733..3743731 Escherichia coli str. K-12 substr. MG1655 948096 NP_418033.1 CDS yiaL NC_000913.3 3743743 3744210 D putative lipase; DUF386 family protein 3743743..3744210 Escherichia coli str. K-12 substr. MG1655 948094 NP_418034.1 CDS yiaM NC_000913.3 3744328 3744801 D 2,3-diketo-L-gulonate TRAP transporter small permease protein 3744328..3744801 Escherichia coli str. K-12 substr. MG1655 948093 YP_026232.1 CDS yiaN NC_000913.3 3744804 3746081 D putative membrane protein; 2,3-diketo-L-gulonate TRAP transporter large permease protein 3744804..3746081 Escherichia coli str. K-12 substr. MG1655 948092 NP_418036.1 CDS yiaO NC_000913.3 3746094 3747080 D putative solute-binding transport protein; 2,3-diketo-L-gulonate-binding periplasmic protein 3746094..3747080 Escherichia coli str. K-12 substr. MG1655 948091 NP_418037.1 CDS lyxK NC_000913.3 3747084 3748580 D L-xylulose kinase, cryptic; L-xylulose kinase 3747084..3748580 Escherichia coli str. K-12 substr. MG1655 948101 NP_418038.1 CDS sgbH NC_000913.3 3748577 3749239 D probable 3-hexulose 6-phosphate synthase; 3-keto-L-gulonate 6-phosphate decarboxylase 3748577..3749239 Escherichia coli str. K-12 substr. MG1655 948098 NP_418039.2 CDS sgbU NC_000913.3 3749232 3750092 D putative L-xylulose 5-phosphate 3-epimerase 3749232..3750092 Escherichia coli str. K-12 substr. MG1655 948100 NP_418040.1 CDS sgbE NC_000913.3 3750086 3750781 D L-ribulose-5-phosphate 4-epimerase 3750086..3750781 Escherichia coli str. K-12 substr. MG1655 948099 b4648 CDS ysaC NC_000913.3 3750813 3750914 R pseudogene; complement(3750813..3750914) Escherichia coli str. K-12 substr. MG1655 5625574 b4649 CDS ysaD NC_000913.3 3750918 3751109 D pseudogene, internal sequence remnant; 3750918..3751109 Escherichia coli str. K-12 substr. MG1655 5625575 NP_418041.1 CDS yiaT NC_000913.3 3751128 3751868 R putative outer membrane protein complement(3751128..3751868) Escherichia coli str. K-12 substr. MG1655 948097 NP_418042.1 CDS yiaU NC_000913.3 3751992 3752966 D putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 3751992..3752966 Escherichia coli str. K-12 substr. MG1655 948107 NP_418043.1 CDS yiaV NC_000913.3 3752963 3754099 R putative membrane protein; membrane fusion protein (MFP) component of efflux pump, signal anchor complement(3752963..3754099) Escherichia coli str. K-12 substr. MG1655 948106 NP_418044.1 CDS yiaW NC_000913.3 3754105 3754428 R DUF3302 family inner membrane protein complement(3754105..3754428) Escherichia coli str. K-12 substr. MG1655 948105 NP_418045.4 CDS aldB NC_000913.3 3754973 3756511 R aldehyde dehydrogenase B (lactaldehyde dehydrogenase); aldehyde dehydrogenase B complement(3754973..3756511) Escherichia coli str. K-12 substr. MG1655 948104 YP_026233.1 CDS yiaY NC_000913.3 3756676 3757827 R putative oxidoreductase; putative Fe-containing alcohol dehydrogenase, Pfam00465 family complement(3756676..3757827) Escherichia coli str. K-12 substr. MG1655 948102 NP_418047.1 CDS selB NC_000913.3 3758017 3759861 R selenocysteinyl-tRNA-specific translation factor complement(3758017..3759861) Escherichia coli str. K-12 substr. MG1655 948103 NP_418048.1 CDS selA NC_000913.3 3759858 3761249 R selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase; selenocysteine synthase complement(3759858..3761249) Escherichia coli str. K-12 substr. MG1655 948124 NP_418049.1 CDS yibF NC_000913.3 3761347 3761955 R putative S-transferase; glutathione S-transferase homolog complement(3761347..3761955) Escherichia coli str. K-12 substr. MG1655 948113 NP_418050.1 CDS rhsA NC_000913.3 3762183 3766316 D rhsA protein in rhs element; Rhs family protein, putative polymorphic toxin; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor 3762183..3766316 Escherichia coli str. K-12 substr. MG1655 948120 NP_418051.1 CDS yibA NC_000913.3 3766337 3767179 D HEAT-domain lethality reduction protein; putative immunity protein for putative polymorphic toxin RhsA 3766337..3767179 Escherichia coli str. K-12 substr. MG1655 948108 b3595 CDS rhsJ NC_000913.3 3767221 3768165 D Rhs-family protein; 3767221..3768165 Escherichia coli str. K-12 substr. MG1655 948112 NP_418053.1 CDS yibG NC_000913.3 3768177 3768638 D TPR-like repeat protein 3768177..3768638 Escherichia coli str. K-12 substr. MG1655 948111 b4650 CDS yibS NC_000913.3 3768639 3768890 D pseudogene, Rhs family protein; 3768639..3768890 Escherichia coli str. K-12 substr. MG1655 5625576 b4651 CDS yibW NC_000913.3 3768892 3769256 D pseudogene, rhsA-linked; join(3768892..3768975,3768975..3769256) Escherichia coli str. K-12 substr. MG1655 5625577 b4615 CDS yibV NC_000913.3 3769345 3769783 D pseudogene; join(3769345..3769671,3769673..3769783) Escherichia coli str. K-12 substr. MG1655 5061524 b4652 CDS yibU NC_000913.3 3769948 3770146 D pseudogene, H repeat-associated protein; join(3769948..3770034,3770033..3770146) Escherichia coli str. K-12 substr. MG1655 5625578 NP_418054.1 CDS yibH NC_000913.3 3770243 3771379 R putative membrane protein; putative membrane fusion protein (MFP) component of efflux pump complement(3770243..3771379) Escherichia coli str. K-12 substr. MG1655 948110 NP_418055.1 CDS yibI NC_000913.3 3771382 3771744 R DUF3302 family inner membrane protein complement(3771382..3771744) Escherichia coli str. K-12 substr. MG1655 948109 NP_418056.1 CDS mtlA NC_000913.3 3772281 3774194 D PTS system, mannitol-specific enzyme IIABC components; fused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components 3772281..3774194 Escherichia coli str. K-12 substr. MG1655 948118 NP_418057.1 CDS mtlD NC_000913.3 3774424 3775572 D mannitol-1-phosphate dehydrogenase; mannitol-1-phosphate dehydrogenase, NAD-dependent 3774424..3775572 Escherichia coli str. K-12 substr. MG1655 948117 NP_418058.1 CDS mtlR NC_000913.3 3775572 3776159 D repressor for mtl; mannitol operon repressor 3775572..3776159 Escherichia coli str. K-12 substr. MG1655 948116 YP_588470.1 CDS yibT NC_000913.3 3776171 3776380 R uncharacterized protein complement(3776171..3776380) Escherichia coli str. K-12 substr. MG1655 1450299 NP_418059.1 CDS yibL NC_000913.3 3776665 3777027 D ribosome-associated DUF2810 family protein 3776665..3777027 Escherichia coli str. K-12 substr. MG1655 948115 NP_418060.1 CDS lldP NC_000913.3 3777399 3779054 D L-lactate permease 3777399..3779054 Escherichia coli str. K-12 substr. MG1655 948114 NP_418061.1 CDS lldR NC_000913.3 3779054 3779830 D transcriptional regulator; dual role activator/repressor for lldPRD operon 3779054..3779830 Escherichia coli str. K-12 substr. MG1655 948122 NP_418062.1 CDS lldD NC_000913.3 3779827 3781017 D L-lactate dehydrogenase; L-lactate dehydrogenase, FMN-linked 3779827..3781017 Escherichia coli str. K-12 substr. MG1655 948121 NP_418063.1 CDS trmL NC_000913.3 3781215 3781688 D tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent 3781215..3781688 Escherichia coli str. K-12 substr. MG1655 948119 NP_418064.1 CDS cysE NC_000913.3 3781741 3782562 R serine acetyltransferase complement(3781741..3782562) Escherichia coli str. K-12 substr. MG1655 948126 NP_418065.1 CDS gpsA NC_000913.3 3782642 3783661 R glycerol-3-phosphate dehydrogenase (NAD+) complement(3782642..3783661) Escherichia coli str. K-12 substr. MG1655 948125 NP_418066.1 CDS secB NC_000913.3 3783661 3784128 R protein export; molecular chaperone; may bind to signel sequence; protein export chaperone complement(3783661..3784128) Escherichia coli str. K-12 substr. MG1655 948123 NP_418067.1 CDS grxC NC_000913.3 3784191 3784442 R glutaredoxin 3 complement(3784191..3784442) Escherichia coli str. K-12 substr. MG1655 948132 NP_418068.1 CDS yibN NC_000913.3 3784584 3785015 R putative rhodanese-related sulfurtransferase complement(3784584..3785015) Escherichia coli str. K-12 substr. MG1655 948131 NP_418069.1 CDS gpmM NC_000913.3 3785260 3786804 D putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; phosphoglycero mutase III, cofactor-independent 3785260..3786804 Escherichia coli str. K-12 substr. MG1655 948130 NP_418070.6 CDS envC NC_000913.3 3786838 3788097 D putative membrane protein; activator of AmiB,C murein hydrolases, septal ring factor 3786838..3788097 Escherichia coli str. K-12 substr. MG1655 948129 NP_418071.4 CDS yibQ NC_000913.3 3788101 3789060 D putative polysaccharide deacetylase 3788101..3789060 Escherichia coli str. K-12 substr. MG1655 948128 NP_418072.1 CDS waaH NC_000913.3 3789047 3790081 R putative regulator; LPS(HepIII)-glucuronic acid glycosyltransferase complement(3789047..3790081) Escherichia coli str. K-12 substr. MG1655 948140 NP_418073.1 CDS tdh NC_000913.3 3790320 3791345 R threonine dehydrogenase; L-threonine 3-dehydrogenase, NAD(P)-binding complement(3790320..3791345) Escherichia coli str. K-12 substr. MG1655 948139 NP_418074.1 CDS kbl NC_000913.3 3791355 3792551 R 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase); glycine C-acetyltransferase complement(3791355..3792551) Escherichia coli str. K-12 substr. MG1655 948138 NP_418075.2 CDS yibB NC_000913.3 3792826 3793683 R involved in lipopolysaccharide biosynthesis; YibB family protein, function unknown complement(3792826..3793683) Escherichia coli str. K-12 substr. MG1655 948137 NP_418076.1 CDS hldD NC_000913.3 3793987 3794919 D ADP-L-glycero-D-mannoheptose-6-epimerase; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding 3793987..3794919 Escherichia coli str. K-12 substr. MG1655 948134 NP_418077.1 CDS waaF NC_000913.3 3794929 3795975 D ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis; ADP-heptose:LPS heptosyltransferase II 3794929..3795975 Escherichia coli str. K-12 substr. MG1655 948135 NP_418078.1 CDS waaC NC_000913.3 3795979 3796938 D heptosyl transferase I; lipopolysaccharide core biosynthesis; ADP-heptose:LPS heptosyl transferase I 3795979..3796938 Escherichia coli str. K-12 substr. MG1655 948136 NP_418079.1 CDS waaL NC_000913.3 3796948 3798207 D O-antigen ligase; lipopolysaccharide core biosynthesis; O-antigen ligase 3796948..3798207 Escherichia coli str. K-12 substr. MG1655 948148 NP_418080.1 CDS waaU NC_000913.3 3798239 3799312 R probably hexose transferase; lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis complement(3798239..3799312) Escherichia coli str. K-12 substr. MG1655 948147 NP_418081.1 CDS waaZ NC_000913.3 3799345 3800196 R lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein complement(3799345..3800196) Escherichia coli str. K-12 substr. MG1655 948146 NP_418082.1 CDS waaY NC_000913.3 3800267 3800965 R lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein complement(3800267..3800965) Escherichia coli str. K-12 substr. MG1655 948145 NP_418083.1 CDS waaJ NC_000913.3 3800983 3801999 R UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase complement(3800983..3801999) Escherichia coli str. K-12 substr. MG1655 948142 NP_418084.1 CDS waaR NC_000913.3 3802039 3803058 R UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase; UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase complement(3802039..3803058) Escherichia coli str. K-12 substr. MG1655 948143 NP_418085.2 CDS waaB NC_000913.3 3803058 3804137 R UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase complement(3803058..3804137) Escherichia coli str. K-12 substr. MG1655 948144 NP_418086.1 CDS waaS NC_000913.3 3804181 3805116 R lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein complement(3804181..3805116) Escherichia coli str. K-12 substr. MG1655 948151 NP_418087.1 CDS waaP NC_000913.3 3805153 3805950 R lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co; kinase that phosphorylates core heptose of lipopolysaccharide complement(3805153..3805950) Escherichia coli str. K-12 substr. MG1655 948150 NP_418088.1 CDS waaG NC_000913.3 3805943 3807067 R glucosyltransferase I; lipopolysaccharide core biosynthesis; glucosyltransferase I complement(3805943..3807067) Escherichia coli str. K-12 substr. MG1655 948149 NP_418089.1 CDS waaQ NC_000913.3 3807064 3808098 R lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein complement(3807064..3808098) Escherichia coli str. K-12 substr. MG1655 948155 NP_418090.1 CDS waaA NC_000913.3 3808540 3809817 D 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) 3808540..3809817 Escherichia coli str. K-12 substr. MG1655 949048 NP_418091.1 CDS coaD NC_000913.3 3809825 3810304 D pantetheine-phosphate adenylyltransferase 3809825..3810304 Escherichia coli str. K-12 substr. MG1655 947386 NP_418092.1 CDS mutM NC_000913.3 3810343 3811152 R formamidopyrimidine DNA glycosylase; formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase complement(3810343..3811152) Escherichia coli str. K-12 substr. MG1655 946765 NP_418093.1 CDS rpmG NC_000913.3 3811250 3811417 R 50S ribosomal subunit protein L33 complement(3811250..3811417) Escherichia coli str. K-12 substr. MG1655 946318 NP_418094.1 CDS rpmB NC_000913.3 3811438 3811674 R 50S ribosomal subunit protein L28 complement(3811438..3811674) Escherichia coli str. K-12 substr. MG1655 946941 NP_418095.4 CDS yicR NC_000913.3 3811891 3812559 R DNA repair protein; UPF0758 family protein complement(3811891..3812559) Escherichia coli str. K-12 substr. MG1655 948968 NP_418096.4 CDS dfp NC_000913.3 3812731 3813951 D flavoprotein affecting synthesis of DNA and pantothenate metabolism; fused 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN-binding 3812731..3813951 Escherichia coli str. K-12 substr. MG1655 949047 NP_418097.1 CDS dut NC_000913.3 3813932 3814387 D deoxyuridinetriphosphatase 3813932..3814387 Escherichia coli str. K-12 substr. MG1655 948607 NP_418098.4 CDS slmA NC_000913.3 3814494 3815090 D putative transcriptional regulator; nucleoid occlusion factor, anti-FtsZ division inhibitor 3814494..3815090 Escherichia coli str. K-12 substr. MG1655 948158 NP_418099.1 CDS pyrE NC_000913.3 3815127 3815768 R orotate phosphoribosyltransferase complement(3815127..3815768) Escherichia coli str. K-12 substr. MG1655 948157 b3643 CDS rph NC_000913.3 3815834 3816549 R ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH; complement(join(3815834..3815881,3815881..3816549)) Escherichia coli str. K-12 substr. MG1655 948156 NP_418101.1 CDS yicC NC_000913.3 3816676 3817539 D putative alpha helix protein; UPF0701 family protein 3816676..3817539 Escherichia coli str. K-12 substr. MG1655 948154 NP_418102.2 CDS dinD NC_000913.3 3817760 3818584 D DNA damage-inducible protein 3817760..3818584 Escherichia coli str. K-12 substr. MG1655 948153 NP_418103.4 CDS yicG NC_000913.3 3818874 3819491 D UPF0126 family inner membrane protein 3818874..3819491 Escherichia coli str. K-12 substr. MG1655 948165 NP_418104.2 CDS ligB NC_000913.3 3819488 3821170 R putative enzyme; DNA ligase, NAD(+)-dependent complement(3819488..3821170) Escherichia coli str. K-12 substr. MG1655 948164 NP_418105.1 CDS gmk NC_000913.3 3821428 3822051 D guanylate kinase 3821428..3822051 Escherichia coli str. K-12 substr. MG1655 948163 NP_418106.1 CDS rpoZ NC_000913.3 3822106 3822381 D RNA polymerase, omega subunit 3822106..3822381 Escherichia coli str. K-12 substr. MG1655 948160 NP_418107.1 CDS spoT NC_000913.3 3822400 3824508 D (p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3822400..3824508 Escherichia coli str. K-12 substr. MG1655 948159 NP_418108.1 CDS trmH NC_000913.3 3824515 3825204 D tRNA mG18-2'-O-methyltransferase, SAM-dependent 3824515..3825204 Escherichia coli str. K-12 substr. MG1655 948161 NP_418109.1 CDS recG NC_000913.3 3825210 3827291 D DNA helicase, resolution of Holliday junctions, branch migration; ATP-dependent DNA helicase 3825210..3827291 Escherichia coli str. K-12 substr. MG1655 948162 NP_418110.1 CDS gltS NC_000913.3 3827460 3828665 R glutamate transport; glutamate transporter complement(3827460..3828665) Escherichia coli str. K-12 substr. MG1655 948166 NP_418111.1 CDS xanP NC_000913.3 3828945 3830336 D putative transport protein; xanthine permease 3828945..3830336 Escherichia coli str. K-12 substr. MG1655 948172 NP_418112.1 CDS yicH NC_000913.3 3830457 3832166 D putative inner membrane-anchored periplasmic AsmA family protein 3830457..3832166 Escherichia coli str. K-12 substr. MG1655 948171 NP_418113.1 CDS yicI NC_000913.3 3832219 3834537 R putative alpha-glucosidase complement(3832219..3834537) Escherichia coli str. K-12 substr. MG1655 948169 NP_418114.4 CDS yicJ NC_000913.3 3834547 3835929 R putative permease; putative transporter complement(3834547..3835929) Escherichia coli str. K-12 substr. MG1655 948168 b4653 CDS yicT NC_000913.3 3836425 3836556 D pseudogene; 3836425..3836556 Escherichia coli str. K-12 substr. MG1655 5625579 NP_418115.1 CDS setC NC_000913.3 3836953 3838137 D two-module transport protein; putative arabinose efflux transporter 3836953..3838137 Escherichia coli str. K-12 substr. MG1655 948177 NP_418116.1 CDS yicL NC_000913.3 3838248 3839171 D putative permease transporter; EamA family inner membrane putative transporter 3838248..3839171 Escherichia coli str. K-12 substr. MG1655 948176 NP_418117.1 CDS nlpA NC_000913.3 3839175 3839993 R lipoprotein-28; cytoplasmic membrane lipoprotein-28 complement(3839175..3839993) Escherichia coli str. K-12 substr. MG1655 948175 YP_588471.1 CDS yicS NC_000913.3 3840215 3840508 D putative periplasmic protein 3840215..3840508 Escherichia coli str. K-12 substr. MG1655 1450300 NP_418118.2 CDS nepI NC_000913.3 3840549 3841739 R putative transport protein; putative transporter complement(3840549..3841739) Escherichia coli str. K-12 substr. MG1655 948213 NP_418119.2 CDS yicN NC_000913.3 3841950 3842402 R DUF1198 family protein complement(3841950..3842402) Escherichia coli str. K-12 substr. MG1655 948173 NP_418120.2 CDS yicO NC_000913.3 3842455 3843789 R putative adenine permease complement(3842455..3843789) Escherichia coli str. K-12 substr. MG1655 948174 NP_418121.1 CDS ade NC_000913.3 3843964 3845730 D cryptic adenine deaminase 3843964..3845730 Escherichia coli str. K-12 substr. MG1655 948210 NP_418122.1 CDS uhpT NC_000913.3 3845776 3847167 R hexose phosphate transport protein; hexose phosphate transporter complement(3845776..3847167) Escherichia coli str. K-12 substr. MG1655 948201 NP_418123.2 CDS uhpC NC_000913.3 3847305 3848624 R regulator of uhpT; membrane protein regulates uhpT expression complement(3847305..3848624) Escherichia coli str. K-12 substr. MG1655 948184 NP_418124.4 CDS uhpB NC_000913.3 3848634 3850136 R sensor histidine protein kinase phosphorylates UhpA; sensory histidine kinase in two-component regulatory sytem with UhpA complement(3848634..3850136) Escherichia coli str. K-12 substr. MG1655 948195 NP_418125.1 CDS uhpA NC_000913.3 3850136 3850726 R response regulator, positive activator of uhpT transcription (sensor, uhpB); response regulator in two-component regulatory system wtih UhpB complement(3850136..3850726) Escherichia coli str. K-12 substr. MG1655 948178 NP_418126.1 CDS ilvN NC_000913.3 3850802 3851092 R acetolactate synthase I, valine sensitive, small subunit; acetolactate synthase 1 small subunit complement(3850802..3851092) Escherichia coli str. K-12 substr. MG1655 948183 NP_418127.1 CDS ilvB NC_000913.3 3851096 3852784 R acetolactate synthase I,valine-sensitive, large subunit; acetolactate synthase 2 large subunit complement(3851096..3852784) Escherichia coli str. K-12 substr. MG1655 948182 NP_418128.1 CDS ivbL NC_000913.3 3852890 3852988 R ilvB operon leader peptide complement(3852890..3852988) Escherichia coli str. K-12 substr. MG1655 948181 YP_001165331.1 CDS tisB NC_000913.3 3853553 3853642 D toxic membrane persister formation peptide, LexA-regulated 3853553..3853642 Escherichia coli str. K-12 substr. MG1655 5061527 NP_418129.2 CDS emrD NC_000913.3 3853922 3855106 D 2-module integral membrane pump; multidrug resistance; multidrug efflux system protein 3853922..3855106 Escherichia coli str. K-12 substr. MG1655 948180 NP_418130.1 CDS yidF NC_000913.3 3855114 3855611 R putative transcriptional regulator; putative Cys-type oxidative YidJ-maturating enzyme complement(3855114..3855611) Escherichia coli str. K-12 substr. MG1655 948179 NP_418131.1 CDS yidG NC_000913.3 3855608 3855970 R inner membrane protein complement(3855608..3855970) Escherichia coli str. K-12 substr. MG1655 948191 NP_418132.1 CDS yidH NC_000913.3 3855960 3856307 R DUF202 family inner membrane protein complement(3855960..3856307) Escherichia coli str. K-12 substr. MG1655 948190 NP_418133.1 CDS yidI NC_000913.3 3856415 3856864 D inner membrane protein 3856415..3856864 Escherichia coli str. K-12 substr. MG1655 948189 NP_418134.1 CDS yidJ NC_000913.3 3856911 3858404 R putative sulfatase; sulfatase/phosphatase superfamily protein complement(3856911..3858404) Escherichia coli str. K-12 substr. MG1655 948188 NP_418135.1 CDS yidK NC_000913.3 3858401 3860116 R putative cotransporter; putative transporter complement(3858401..3860116) Escherichia coli str. K-12 substr. MG1655 948185 NP_418136.2 CDS yidL NC_000913.3 3860283 3861176 D putative ARAC-type regulatory protein; AraC family putative transcriptional regulator 3860283..3861176 Escherichia coli str. K-12 substr. MG1655 948186 b4556 CDS glvG NC_000913.3 3861173 3861987 R pseudogene; probable 6-phospho-beta-glucosidase; complement(3861173..3861987) Escherichia coli str. K-12 substr. MG1655 1450301 b3683 CDS glvC NC_000913.3 3861987 3863603 R pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin-like IIB component; PTS system, arbutin-like IIC component; complement(3861987..3863603) Escherichia coli str. K-12 substr. MG1655 2847721 NP_418139.1 CDS yidP NC_000913.3 3863899 3864615 D putative transcriptional regulator; UTRA domain-containing GntR family putative transcriptional regulator 3863899..3864615 Escherichia coli str. K-12 substr. MG1655 948194 NP_418140.4 CDS yidE NC_000913.3 3864612 3866273 R putative transport protein; putative transporter complement(3864612..3866273) Escherichia coli str. K-12 substr. MG1655 948193 NP_418141.2 CDS ibpB NC_000913.3 3866469 3866897 R heat shock protein; heat shock chaperone complement(3866469..3866897) Escherichia coli str. K-12 substr. MG1655 948192 NP_418142.1 CDS ibpA NC_000913.3 3867009 3867422 R heat shock protein; heat shock chaperone complement(3867009..3867422) Escherichia coli str. K-12 substr. MG1655 948200 NP_418143.2 CDS yidQ NC_000913.3 3867728 3868060 D DUF1375 family outer membrane protein 3867728..3868060 Escherichia coli str. K-12 substr. MG1655 948199 NP_418144.3 CDS yidR NC_000913.3 3868062 3869309 R DUF3748 family protein complement(3868062..3869309) Escherichia coli str. K-12 substr. MG1655 948198 NP_418145.2 CDS cbrA NC_000913.3 3869377 3870441 D colicin M resistance protein; FAD-binding protein, putative oxidoreductase 3869377..3870441 Escherichia coli str. K-12 substr. MG1655 948197 NP_418146.4 CDS dgoT NC_000913.3 3870438 3871730 R D-galactonate transport; D-galactonate transporter complement(3870438..3871730) Escherichia coli str. K-12 substr. MG1655 948196 YP_026237.1 CDS dgoD NC_000913.3 3871850 3872998 R galactonate dehydratase complement(3871850..3872998) Escherichia coli str. K-12 substr. MG1655 2847765 YP_026238.1 CDS dgoA NC_000913.3 3872995 3873612 R 2-oxo-3-deoxygalactonate 6-phosphate aldolase complement(3872995..3873612) Escherichia coli str. K-12 substr. MG1655 2847766 NP_418148.1 CDS dgoK NC_000913.3 3873596 3874474 R 2-oxo-3-deoxygalactonate kinase complement(3873596..3874474) Escherichia coli str. K-12 substr. MG1655 948207 YP_026239.1 CDS dgoR NC_000913.3 3874471 3875160 R transcriptional repressor for galactonate utilization (GntR family); putative DNA-binding transcriptional regulator complement(3874471..3875160) Escherichia coli str. K-12 substr. MG1655 2847767 YP_026240.1 CDS yidX NC_000913.3 3875438 3876094 D putative replicase EC 2.7.-; putative lipoprotein 3875438..3876094 Escherichia coli str. K-12 substr. MG1655 948202 NP_418152.1 CDS yidA NC_000913.3 3876140 3876952 R sugar phosphate phosphatase; substrates include erythrose 4-P and mannose 1-P phosphatase complement(3876140..3876952) Escherichia coli str. K-12 substr. MG1655 948204 NP_418153.4 CDS yidB NC_000913.3 3877067 3877465 R DUF937 family protein complement(3877067..3877465) Escherichia coli str. K-12 substr. MG1655 948212 YP_026241.1 CDS gyrB NC_000913.3 3877705 3880119 R DNA gyrase subunit B, type II topoisomerase, ATPase activity; DNA gyrase, subunit B complement(3877705..3880119) Escherichia coli str. K-12 substr. MG1655 948211 NP_418155.1 CDS recF NC_000913.3 3880148 3881221 R ssDNA and dsDNA binding, ATP binding; gap repair protein complement(3880148..3881221) Escherichia coli str. K-12 substr. MG1655 948209 NP_418156.1 CDS dnaN NC_000913.3 3881221 3882321 R DNA polymerase III, beta-subunit; DNA polymerase III, beta subunit complement(3881221..3882321) Escherichia coli str. K-12 substr. MG1655 948218 NP_418157.1 CDS dnaA NC_000913.3 3882326 3883729 R DNA biosynthesis; initiation of chromosome replication; can be transcription regulator; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator complement(3882326..3883729) Escherichia coli str. K-12 substr. MG1655 948217 NP_418158.1 CDS rpmH NC_000913.3 3884336 3884476 D 50S ribosomal subunit protein L34 3884336..3884476 Escherichia coli str. K-12 substr. MG1655 948216 NP_418159.1 CDS rnpA NC_000913.3 3884493 3884852 D RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA, 4.5S RNA, and other naturally occurring stable RNA molecules; RNase P also affects gene expression of polycistronic operon mRNAs; protein C5 component of RNase P 3884493..3884852 Escherichia coli str. K-12 substr. MG1655 948215 YP_588472.1 CDS yidD NC_000913.3 3884816 3885073 D membrane protein insertion efficiency factor, inner membrane protein, UPF0161 family 3884816..3885073 Escherichia coli str. K-12 substr. MG1655 1450303 NP_418161.1 CDS yidC NC_000913.3 3885076 3886722 D 60 KD inner-membrane protein; membrane protein insertase 3885076..3886722 Escherichia coli str. K-12 substr. MG1655 948214 NP_418162.1 CDS mnmE NC_000913.3 3886828 3888192 D tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase 3886828..3888192 Escherichia coli str. K-12 substr. MG1655 948222 NP_418163.1 CDS tnaC NC_000913.3 3888435 3888509 D tryptophanase leader peptide 3888435..3888509 Escherichia coli str. K-12 substr. MG1655 948223 NP_418164.4 CDS tnaA NC_000913.3 3888730 3890145 D tryptophanase; tryptophanase/L-cysteine desulfhydrase, PLP-dependent 3888730..3890145 Escherichia coli str. K-12 substr. MG1655 948221 NP_418165.1 CDS tnaB NC_000913.3 3890236 3891483 D low affinity tryptophan permease; tryptophan transporter of low affinity 3890236..3891483 Escherichia coli str. K-12 substr. MG1655 948220 NP_418166.1 CDS mdtL NC_000913.3 3891615 3892790 D putative transport protein; multidrug efflux system protein 3891615..3892790 Escherichia coli str. K-12 substr. MG1655 948219 NP_418167.1 CDS yidZ NC_000913.3 3892765 3893724 D putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 3892765..3893724 Escherichia coli str. K-12 substr. MG1655 948227 NP_418168.2 CDS yieE NC_000913.3 3893881 3894630 D phosphopantetheinyl transferase superfamily protein 3893881..3894630 Escherichia coli str. K-12 substr. MG1655 948226 NP_418169.1 CDS chrR NC_000913.3 3894652 3895218 D chromate reductase, Class I, flavoprotein 3894652..3895218 Escherichia coli str. K-12 substr. MG1655 948225 NP_418170.1 CDS purP NC_000913.3 3895272 3896609 R putative membrane / transport protein; adenine permease, high affinity; adenine:H+ symporter complement(3895272..3896609) Escherichia coli str. K-12 substr. MG1655 948224 NP_418171.1 CDS yieH NC_000913.3 3896774 3897439 D putative phosphatase; phosphoenolpyruvate and 6-phosphogluconate phosphatase 3896774..3897439 Escherichia coli str. K-12 substr. MG1655 948232 NP_418172.1 CDS cbrB NC_000913.3 3897506 3897973 D PRK09823 family inner membrane protein, creBC regulon 3897506..3897973 Escherichia coli str. K-12 substr. MG1655 948231 NP_418173.1 CDS cbrC NC_000913.3 3898022 3898609 D UPF0167 family protein 3898022..3898609 Escherichia coli str. K-12 substr. MG1655 948230 YP_026242.1 CDS yieK NC_000913.3 3898671 3899393 R pyrimidine-specific nucleoside hydrolase; putative 6-phosphogluconolactonase complement(3898671..3899393) Escherichia coli str. K-12 substr. MG1655 948229 NP_418175.3 CDS yieL NC_000913.3 3899408 3900577 R putative xylanase complement(3899408..3900577) Escherichia coli str. K-12 substr. MG1655 948272 NP_418176.1 CDS bglH NC_000913.3 3900604 3902220 R putative receptor protein; carbohydrate-specific outer membrane porin, cryptic complement(3900604..3902220) Escherichia coli str. K-12 substr. MG1655 948228 NP_418177.1 CDS bglB NC_000913.3 3902289 3903701 R phospho-beta-glucosidase B; cryptic; cryptic phospho-beta-glucosidase B complement(3902289..3903701) Escherichia coli str. K-12 substr. MG1655 948234 NP_418178.1 CDS bglF NC_000913.3 3903720 3905597 R PTS system beta-glucosides, enzyme II, cryptic; fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component complement(3903720..3905597) Escherichia coli str. K-12 substr. MG1655 948236 NP_418179.1 CDS bglG NC_000913.3 3905731 3906567 R positive regulation of bgl operon; transcriptional antiterminator of the bgl operon complement(3905731..3906567) Escherichia coli str. K-12 substr. MG1655 948235 NP_418180.1 CDS phoU NC_000913.3 3906853 3907578 R negative regulator for pho regulon and putative enzyme in phosphate metabolism; negative regulator of PhoR/PhoB two-component regulator complement(3906853..3907578) Escherichia coli str. K-12 substr. MG1655 948233 NP_418181.1 CDS pstB NC_000913.3 3907593 3908366 R ATP-binding component of high-affinity phosphate-specific transport system; ATP-binding component of ABC superfamily; phosphate transporter subunit complement(3907593..3908366) Escherichia coli str. K-12 substr. MG1655 948240 NP_418182.1 CDS pstA NC_000913.3 3908549 3909439 R high-affinity phosphate-specific transport system; membrane component of ABC superfamily; phosphate transporter subunit complement(3908549..3909439) Escherichia coli str. K-12 substr. MG1655 948239 NP_418183.1 CDS pstC NC_000913.3 3909439 3910398 R high-affinity phosphate-specific transport system, cytoplasmic membrane component; membrane component of ABC superfamily; phosphate transporter subunit complement(3909439..3910398) Escherichia coli str. K-12 substr. MG1655 948238 NP_418184.1 CDS pstS NC_000913.3 3910485 3911525 R high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein; periplasmic-binding component of ABC superfamily; periplasmic phosphate binding protein, high-affinity complement(3910485..3911525) Escherichia coli str. K-12 substr. MG1655 948237 NP_418185.1 CDS glmS NC_000913.3 3911839 3913668 R L-glutamine:D-fructose-6-phosphate aminotransferase complement(3911839..3913668) Escherichia coli str. K-12 substr. MG1655 948241 NP_418186.1 CDS glmU NC_000913.3 3913830 3915200 R N-acetyl glucosamine-1-phosphate uridyltransferase; fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase complement(3913830..3915200) Escherichia coli str. K-12 substr. MG1655 948246 NP_418187.1 CDS atpC NC_000913.3 3915553 3915972 R membrane-bound ATP synthase, F1 sector, epsilon-subunit; F1 sector of membrane-bound ATP synthase, epsilon subunit complement(3915553..3915972) Escherichia coli str. K-12 substr. MG1655 948245 NP_418188.1 CDS atpD NC_000913.3 3915993 3917375 R membrane-bound ATP synthase, F1 sector, beta-subunit; F1 sector of membrane-bound ATP synthase, beta subunit complement(3915993..3917375) Escherichia coli str. K-12 substr. MG1655 948244 NP_418189.1 CDS atpG NC_000913.3 3917402 3918265 R membrane-bound ATP synthase, F1 sector, gamma-subunit; F1 sector of membrane-bound ATP synthase, gamma subunit complement(3917402..3918265) Escherichia coli str. K-12 substr. MG1655 948243 NP_418190.1 CDS atpA NC_000913.3 3918316 3919857 R membrane-bound ATP synthase, F1 sector, alpha-subunit; F1 sector of membrane-bound ATP synthase, alpha subunit complement(3918316..3919857) Escherichia coli str. K-12 substr. MG1655 948242 NP_418191.1 CDS atpH NC_000913.3 3919870 3920403 R membrane-bound ATP synthase, F1 sector, delta-subunit; F1 sector of membrane-bound ATP synthase, delta subunit complement(3919870..3920403) Escherichia coli str. K-12 substr. MG1655 948254 NP_418192.1 CDS atpF NC_000913.3 3920418 3920888 R membrane-bound ATP synthase, F0 sector, subunit b; F0 sector of membrane-bound ATP synthase, subunit b complement(3920418..3920888) Escherichia coli str. K-12 substr. MG1655 948247 NP_418193.1 CDS atpE NC_000913.3 3920950 3921189 R membrane-bound ATP synthase, F0 sector, subunit c; F0 sector of membrane-bound ATP synthase, subunit c complement(3920950..3921189) Escherichia coli str. K-12 substr. MG1655 948253 NP_418194.1 CDS atpB NC_000913.3 3921236 3922051 R membrane-bound ATP synthase, F0 sector, subunit a; F0 sector of membrane-bound ATP synthase, subunit a complement(3921236..3922051) Escherichia coli str. K-12 substr. MG1655 948252 NP_418195.2 CDS atpI NC_000913.3 3922060 3922440 R membrane-bound ATP synthase, dispensable protein, affects expression of atpB; ATP synthase, membrane-bound accessory factor complement(3922060..3922440) Escherichia coli str. K-12 substr. MG1655 948251 NP_418196.1 CDS rsmG NC_000913.3 3923057 3923680 R glucose-inhibited division; chromosome replication?; 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein complement(3923057..3923680) Escherichia coli str. K-12 substr. MG1655 948250 NP_418197.1 CDS mnmG NC_000913.3 3923744 3925633 R glucose-inhibited division; chromosome replication?; 5-methylaminomethyl-2-thiouridine modification at tRNA U34 complement(3923744..3925633) Escherichia coli str. K-12 substr. MG1655 948248 NP_418198.1 CDS mioC NC_000913.3 3926012 3926455 R initiation of chromosome replication; FMN-binding protein MioC complement(3926012..3926455) Escherichia coli str. K-12 substr. MG1655 948249 NP_418199.1 CDS asnC NC_000913.3 3926545 3927003 R regulator for asnA, asnC and gidA; transcriptional activator of asnA; autorepressor complement(3926545..3927003) Escherichia coli str. K-12 substr. MG1655 948259 NP_418200.1 CDS asnA NC_000913.3 3927155 3928147 D asparagine synthetase A 3927155..3928147 Escherichia coli str. K-12 substr. MG1655 948258 YP_026243.1 CDS viaA NC_000913.3 3928152 3929603 R stimulator of RavA ATPase activity; von Willebrand factor domain protein complement(3928152..3929603) Escherichia coli str. K-12 substr. MG1655 948257 NP_418202.4 CDS ravA NC_000913.3 3929597 3931093 R putative 2-component regulator; hexameric AAA+ MoxR family ATPase, putative molecular chaperone complement(3929597..3931093) Escherichia coli str. K-12 substr. MG1655 948256 YP_026244.1 CDS kup NC_000913.3 3931316 3933184 D low affinity potassium transport system; potassium transporter 3931316..3933184 Escherichia coli str. K-12 substr. MG1655 948255 NP_418204.2 CDS rbsD NC_000913.3 3933351 3933770 D D-ribose high-affinity transport system; membrane-associated protein; putative cytoplasmic sugar-binding protein 3933351..3933770 Escherichia coli str. K-12 substr. MG1655 948267 NP_418205.1 CDS rbsA NC_000913.3 3933778 3935283 D ATP-binding component of D-ribose high-affinity transport system; fused D-ribose transporter subunits of ABC superfamily: ATP-binding components 3933778..3935283 Escherichia coli str. K-12 substr. MG1655 948264 NP_418206.1 CDS rbsC NC_000913.3 3935288 3936253 D D-ribose high-affinity transport system; membrane component of ABC superfamily; D-ribose transporter subunit 3935288..3936253 Escherichia coli str. K-12 substr. MG1655 948262 NP_418207.1 CDS rbsB NC_000913.3 3936278 3937168 D D-ribose periplasmic binding protein; periplasmic-binding compoent of ABC superfamily; D-ribose transporter subunit 3936278..3937168 Escherichia coli str. K-12 substr. MG1655 948261 NP_418208.1 CDS rbsK NC_000913.3 3937294 3938223 D ribokinase 3937294..3938223 Escherichia coli str. K-12 substr. MG1655 948260 NP_418209.1 CDS rbsR NC_000913.3 3938227 3939219 D regulator for rbs operon; transcriptional repressor of ribose metabolism 3938227..3939219 Escherichia coli str. K-12 substr. MG1655 948266 NP_418210.1 CDS hsrA NC_000913.3 3939185 3940612 R putative transport protein (MFS family); high copy suppressor of RspA: relieves RspA-mediated reduction of sigma(S) levels; overexpression also reduces MetE activity; effect proposed to be via an elevation in levels of homocysteine, causing a concomitant increase in homocysteine thiolactone; overexpression has no effect on resistance to a variety of toxic compounds; overexpression has no effect on resistance to a variety of toxic compounds; putative multidrug or homocysteine efflux system complement(3939185..3940612) Escherichia coli str. K-12 substr. MG1655 948265 YP_026245.1 CDS yieP NC_000913.3 3940635 3941327 R putative transcriptional regulator complement(3940635..3941327) Escherichia coli str. K-12 substr. MG1655 948263 YP_026246.1 CDS hdfR NC_000913.3 3947128 3947967 R transcriptional regulator of the flhDC operon; flhDC operon transcriptional repressor complement(3947128..3947967) Escherichia coli str. K-12 substr. MG1655 2847698 NP_418213.1 CDS yifE NC_000913.3 3948086 3948424 D UPF0438 family protein 3948086..3948424 Escherichia coli str. K-12 substr. MG1655 948274 NP_418214.2 CDS yifB NC_000913.3 3948449 3949969 R putative 2-component regulator; bifunctional magnesium chelatase family protein and putative transcriptional regulator complement(3948449..3949969) Escherichia coli str. K-12 substr. MG1655 948282 NP_418215.1 CDS ilvL NC_000913.3 3950322 3950420 D ilvGEDA operon leader peptide; ilvG operon leader peptide 3950322..3950420 Escherichia coli str. K-12 substr. MG1655 948283 YP_002791259.1 CDS ilvX NC_000913.3 3950507 3950557 D uncharacterized protein 3950507..3950557 Escherichia coli str. K-12 substr. MG1655 7751639 b4488 CDS ilvG NC_000913.3 3950560 3952204 D pseudogene, acetolactate synthase 2 large subunit, valine-insensitive; acetolactate synthase II, large subunit, cryptic, interrupted; join(3950560..3951543,3951542..3952204) Escherichia coli str. K-12 substr. MG1655 2847699 NP_418217.1 CDS ilvM NC_000913.3 3952201 3952464 D acetolactate synthase II, valine insensitive, small subunit; acetolactate synthase 2 small subunit 3952201..3952464 Escherichia coli str. K-12 substr. MG1655 948279 YP_026247.1 CDS ilvE NC_000913.3 3952484 3953413 D branched-chain amino-acid aminotransferase 3952484..3953413 Escherichia coli str. K-12 substr. MG1655 948278 YP_026248.1 CDS ilvD NC_000913.3 3953478 3955328 D dihydroxyacid dehydratase 3953478..3955328 Escherichia coli str. K-12 substr. MG1655 948277 NP_418220.1 CDS ilvA NC_000913.3 3955331 3956875 D threonine deaminase (dehydratase); L-threonine dehydratase, biosynthetic; also known as threonine deaminase 3955331..3956875 Escherichia coli str. K-12 substr. MG1655 948287 NP_418221.1 CDS ilvY NC_000913.3 3956927 3957820 R positive regulator for ilvC; transcriptional activator of ilvC; autorepressor complement(3956927..3957820) Escherichia coli str. K-12 substr. MG1655 948284 NP_418222.1 CDS ilvC NC_000913.3 3957970 3959445 D ketol-acid reductoisomerase; ketol-acid reductoisomerase, NAD(P)-binding 3957970..3959445 Escherichia coli str. K-12 substr. MG1655 948286 NP_418223.1 CDS ppiC NC_000913.3 3959532 3959813 R peptidyl-prolyl cis-trans isomerase C (rotamase C) complement(3959532..3959813) Escherichia coli str. K-12 substr. MG1655 948285 b3777 CDS yifN NC_000913.3 3960012 3960460 R PemK toxin family pseudogene; complement(join(3960012..3960254,3960254..3960460)) Escherichia coli str. K-12 substr. MG1655 2847676 YP_026251.1 CDS rep NC_000913.3 3960677 3962698 D rep helicase, a single-stranded DNA dependent ATPase; DNA helicase and single-stranded DNA-dependent ATPase 3960677..3962698 Escherichia coli str. K-12 substr. MG1655 948292 YP_026252.1 CDS gpp NC_000913.3 3962745 3964229 R guanosine pentaphosphatase; exopolyphosphatase; guanosine pentaphosphatase/exopolyphosphatase complement(3962745..3964229) Escherichia coli str. K-12 substr. MG1655 948291 NP_418227.1 CDS rhlB NC_000913.3 3964365 3965630 R putative ATP-dependent RNA helicase; ATP-dependent RNA helicase complement(3964365..3965630) Escherichia coli str. K-12 substr. MG1655 948290 NP_418228.2 CDS trxA NC_000913.3 3965761 3966090 D thioredoxin 1 3965761..3966090 Escherichia coli str. K-12 substr. MG1655 948289 NP_418230.1 CDS rho NC_000913.3 3966417 3967676 D transcription termination factor Rho; polarity suppressor; transcription termination factor 3966417..3967676 Escherichia coli str. K-12 substr. MG1655 948297 NP_418231.1 CDS wecA NC_000913.3 3967916 3969019 D UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase 3967916..3969019 Escherichia coli str. K-12 substr. MG1655 948789 NP_418232.2 CDS wzzE NC_000913.3 3969031 3970077 D modulator of enterobacterial common antigen (ECA) polysaccharide chain length; Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein 3969031..3970077 Escherichia coli str. K-12 substr. MG1655 944815 YP_026253.1 CDS wecB NC_000913.3 3970133 3971263 D UDP-N-acetyl glucosamine-2-epimerase 3970133..3971263 Escherichia coli str. K-12 substr. MG1655 944789 YP_026254.1 CDS wecC NC_000913.3 3971260 3972522 D UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; synthesis of enterobacterial common antigen (ECA); UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase 3971260..3972522 Escherichia coli str. K-12 substr. MG1655 948977 YP_026255.1 CDS rffG NC_000913.3 3972522 3973589 D dTDP-glucose 4,6-dehydratase 3972522..3973589 Escherichia coli str. K-12 substr. MG1655 948300 NP_418236.1 CDS rffH NC_000913.3 3973608 3974489 D glucose-1-phosphate thymidylyltransferase 3973608..3974489 Escherichia coli str. K-12 substr. MG1655 948299 YP_026256.2 CDS wecD NC_000913.3 3974467 3975141 D putative acyltransferase, lipopolysaccharide biosynthesis protein; TDP-fucosamine acetyltransferase 3974467..3975141 Escherichia coli str. K-12 substr. MG1655 948298 NP_418238.1 CDS wecE NC_000913.3 3975146 3976276 D TDP-4-oxo-6-deoxy-D-glucose transaminase 3975146..3976276 Escherichia coli str. K-12 substr. MG1655 948296 NP_418239.1 CDS wzxE NC_000913.3 3976278 3977528 D O-antigen translocase in LPS biosynthesis; O-antigen translocase 3976278..3977528 Escherichia coli str. K-12 substr. MG1655 948294 YP_026257.1 CDS wecF NC_000913.3 3977525 3978604 D TDP-Fuc4NAc:lipidII transferase; TDP-Fuc4NAc:lipidIIFuc4NAc transferase 3977525..3978604 Escherichia coli str. K-12 substr. MG1655 2847677 NP_418241.1 CDS wzyE NC_000913.3 3978601 3979953 D putative ECA polymerization protein; putative ECA polysaccharide chain elongation protein 3978601..3979953 Escherichia coli str. K-12 substr. MG1655 948293 NP_418242.1 CDS wecG NC_000913.3 3979956 3980696 D probable UDP-N-acetyl-D-mannosaminuronic acid transferase; synthesis of enterobacterial common antigen (ECA); UDP-N-acetyl-D-mannosaminuronic acid transferase 3979956..3980696 Escherichia coli str. K-12 substr. MG1655 948301 YP_026258.1 CDS yifK NC_000913.3 3980887 3982272 D putative amino acid/amine transport protein; putative APC family amino acid transporter 3980887..3982272 Escherichia coli str. K-12 substr. MG1655 945400 YP_026259.1 CDS aslB NC_000913.3 3982958 3984193 D putative arylsulfatase regulator; putative AslA-specific sulfatase-maturating enzyme 3982958..3984193 Escherichia coli str. K-12 substr. MG1655 949013 NP_418245.1 CDS aslA NC_000913.3 3984352 3986007 R arylsulfatase; putative Ser-type periplasmic non-aryl sulfatase complement(3984352..3986007) Escherichia coli str. K-12 substr. MG1655 949015 NP_418246.1 CDS hemY NC_000913.3 3986686 3987882 R a late step of protoheme IX synthesis; putative protoheme IX synthesis protein complement(3986686..3987882) Escherichia coli str. K-12 substr. MG1655 948311 NP_418247.1 CDS hemX NC_000913.3 3987885 3989066 R uroporphyrinogen III methylase; putative uroporphyrinogen III methyltransferase complement(3987885..3989066) Escherichia coli str. K-12 substr. MG1655 948446 NP_418248.1 CDS hemD NC_000913.3 3989088 3989828 R uroporphyrinogen III synthase complement(3989088..3989828) Escherichia coli str. K-12 substr. MG1655 948587 YP_026260.1 CDS hemC NC_000913.3 3989825 3990766 R porphobilinogen deaminase = hydroxymethylbilane synthase; hydroxymethylbilane synthase complement(3989825..3990766) Escherichia coli str. K-12 substr. MG1655 947759 NP_418250.1 CDS cyaA NC_000913.3 3991153 3993699 D adenylate cyclase 3991153..3993699 Escherichia coli str. K-12 substr. MG1655 947755 NP_418251.1 CDS cyaY NC_000913.3 3993739 3994059 R iron-binding frataxin homolog; cyaY is expressed; neither knock-out nor overexpression of cyaY in Escherichia coli affects cellular iron content or sensitivity to oxidants; possibly involved in maintaining the intracellular iron pool in a soluble, non-toxic and bio-available form for biosynthetic pathways, while preventing the participation of iron in oxidative damage; iron-dependent inhibitor of iron-sulfur cluster formation; frataxin; iron-binding and oxidizing protein complement(3993739..3994059) Escherichia coli str. K-12 substr. MG1655 947754 YP_588473.1 CDS yifL NC_000913.3 3994522 3994725 D putative lipoprotein 3994522..3994725 Escherichia coli str. K-12 substr. MG1655 1450304 NP_418254.2 CDS dapF NC_000913.3 3994762 3995586 D diaminopimelate epimerase 3994762..3995586 Escherichia coli str. K-12 substr. MG1655 948364 NP_418255.1 CDS yigA NC_000913.3 3995583 3996290 D DUF484 family protein 3995583..3996290 Escherichia coli str. K-12 substr. MG1655 948359 NP_418256.1 CDS xerC NC_000913.3 3996287 3997183 D site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division; site-specific tyrosine recombinase 3996287..3997183 Escherichia coli str. K-12 substr. MG1655 948355 NP_418257.1 CDS yigB NC_000913.3 3997183 3997899 D putative phosphatase; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis 3997183..3997899 Escherichia coli str. K-12 substr. MG1655 948357 NP_418258.1 CDS uvrD NC_000913.3 3997983 4000145 D DNA-dependent ATPase I and helicase II 3997983..4000145 Escherichia coli str. K-12 substr. MG1655 948347 YP_026261.1 CDS yigE NC_000913.3 4000292 4001056 R DUF2233 family protein complement(4000292..4001056) Escherichia coli str. K-12 substr. MG1655 2847679 NP_418260.1 CDS corA NC_000913.3 4001426 4002376 D Mg2+ transport, system I; magnesium/nickel/cobalt transporter 4001426..4002376 Escherichia coli str. K-12 substr. MG1655 948351 NP_418261.1 CDS yigF NC_000913.3 4002419 4002799 R putative inner membrane protein complement(4002419..4002799) Escherichia coli str. K-12 substr. MG1655 948340 NP_418262.2 CDS yigG NC_000913.3 4002813 4003193 R PRK11371 family inner membrane protein complement(4002813..4003193) Escherichia coli str. K-12 substr. MG1655 948344 YP_026262.1 CDS rarD NC_000913.3 4003288 4004178 R putative chloramphenical resistance permease complement(4003288..4004178) Escherichia coli str. K-12 substr. MG1655 948330 NP_418264.4 CDS yigI NC_000913.3 4004230 4004697 R 4HBT thioesterase family protein complement(4004230..4004697) Escherichia coli str. K-12 substr. MG1655 948338 NP_418265.1 CDS pldA NC_000913.3 4004862 4005731 D outer membrane phospholipase A 4004862..4005731 Escherichia coli str. K-12 substr. MG1655 948307 YP_026263.3 CDS recQ NC_000913.3 4005864 4007693 D ATP-dependent DNA helicase 4005864..4007693 Escherichia coli str. K-12 substr. MG1655 948318 YP_026264.1 CDS rhtC NC_000913.3 4007757 4008377 D amino acid exporter (threonine); threonine efflux protein (RhtB family); threonine efflux pump 4007757..4008377 Escherichia coli str. K-12 substr. MG1655 948317 YP_026265.1 CDS rhtB NC_000913.3 4008439 4009059 R homoserine, homoserine lactone and S-methyl-methionine efflux pump complement(4008439..4009059) Escherichia coli str. K-12 substr. MG1655 948316 YP_026266.1 CDS pldB NC_000913.3 4009170 4010192 D lysophospholipase L2 4009170..4010192 Escherichia coli str. K-12 substr. MG1655 948314 YP_026267.1 CDS yigL NC_000913.3 4010200 4011000 D conserved protein, phosphatase-like domain; pyridoxal phosphate phosphatase 4010200..4011000 Escherichia coli str. K-12 substr. MG1655 2847768 NP_418271.1 CDS yigM NC_000913.3 4011076 4011975 D putative inner membrane EamA-like transporter 4011076..4011975 Escherichia coli str. K-12 substr. MG1655 948309 NP_418272.1 CDS metR NC_000913.3 4011863 4012816 R regulator for metE and metH; methionine biosynthesis regulon transcriptional regulator complement(4011863..4012816) Escherichia coli str. K-12 substr. MG1655 948310 NP_418273.1 CDS metE NC_000913.3 4013053 4015314 D tetrahydropteroyltriglutamate methyltransferase; 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase 4013053..4015314 Escherichia coli str. K-12 substr. MG1655 948323 YP_026268.1 CDS ysgA NC_000913.3 4015354 4016169 R putative enzyme; putative carboxymethylenebutenolidase complement(4015354..4016169) Escherichia coli str. K-12 substr. MG1655 948320 NP_418275.1 CDS udp NC_000913.3 4016431 4017192 D uridine phosphorylase 4016431..4017192 Escherichia coli str. K-12 substr. MG1655 948987 NP_418276.1 CDS rmuC NC_000913.3 4017333 4018760 D putative alpha helix chain; DNA recombination protein 4017333..4018760 Escherichia coli str. K-12 substr. MG1655 948966 YP_026269.1 CDS ubiE NC_000913.3 4018855 4019610 D 2-octaprenyl-6-methoxy-1,4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase 4018855..4019610 Escherichia coli str. K-12 substr. MG1655 948926 NP_418278.1 CDS ubiJ NC_000913.3 4019624 4020229 D aerobic ubiquinone synthesis protein, SCP2 family protein 4019624..4020229 Escherichia coli str. K-12 substr. MG1655 948915 NP_418279.1 CDS ubiB NC_000913.3 4020226 4021866 D regulator of octaprenylphenol hydroxylation, ubiquinone synthesis; regulator of 2'-N-acetyltransferase; putative ABC1 family protein kinase 4020226..4021866 Escherichia coli str. K-12 substr. MG1655 948322 NP_418280.4 CDS tatA NC_000913.3 4021945 4022214 D TatABCE protein translocation system subunit 4021945..4022214 Escherichia coli str. K-12 substr. MG1655 948321 YP_026270.1 CDS tatB NC_000913.3 4022218 4022733 D TatABCE protein translocation system subunit 4022218..4022733 Escherichia coli str. K-12 substr. MG1655 948319 NP_418282.1 CDS tatC NC_000913.3 4022736 4023512 D TatABCE protein translocation system subunit 4022736..4023512 Escherichia coli str. K-12 substr. MG1655 948328 YP_026271.1 CDS tatD NC_000913.3 4023554 4024336 D cytoplasmic Dnase; quality control of Tat-exported FeS proteins; Mg-dependent cytoplasmic DNase 4023554..4024336 Escherichia coli str. K-12 substr. MG1655 2847752 NP_418284.1 CDS rfaH NC_000913.3 4024333 4024821 R transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin; transcription antitermination protein complement(4024333..4024821) Escherichia coli str. K-12 substr. MG1655 948327 NP_418285.1 CDS ubiD NC_000913.3 4024988 4026481 D 3-octaprenyl-4-hydroxybenzoate decarboxylase 4024988..4026481 Escherichia coli str. K-12 substr. MG1655 948326 NP_418286.1 CDS fre NC_000913.3 4026527 4027228 D ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase); NAD(P)H-flavin reductase 4026527..4027228 Escherichia coli str. K-12 substr. MG1655 948325 YP_026272.1 CDS fadA NC_000913.3 4027609 4028772 R thiolase I; 3-ketoacyl-CoA thiolase; acetyl-CoA transferase; 3-ketoacyl-CoA thiolase (thiolase I) complement(4027609..4028772) Escherichia coli str. K-12 substr. MG1655 948324 NP_418288.1 CDS fadB NC_000913.3 4028782 4030971 R 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase complement(4028782..4030971) Escherichia coli str. K-12 substr. MG1655 948336 NP_418289.1 CDS pepQ NC_000913.3 4031161 4032492 D proline dipeptidase 4031161..4032492 Escherichia coli str. K-12 substr. MG1655 948335 NP_418290.4 CDS yigZ NC_000913.3 4032492 4033106 D UPF0029 family protein 4032492..4033106 Escherichia coli str. K-12 substr. MG1655 948334 YP_026273.1 CDS trkH NC_000913.3 4033145 4034596 D potassium uptake, requires TrkE; potassium transporter 4033145..4034596 Escherichia coli str. K-12 substr. MG1655 948333 NP_418292.1 CDS hemG NC_000913.3 4034608 4035153 D protoporphyrin oxidase; protoporphyrin oxidase, flavoprotein 4034608..4035153 Escherichia coli str. K-12 substr. MG1655 948331 NP_418293.2 CDS mobB NC_000913.3 4040906 4041433 R molybdopterin-guanine dinucleotide biosynthesis protein B complement(4040906..4041433) Escherichia coli str. K-12 substr. MG1655 948343 NP_418294.1 CDS mobA NC_000913.3 4041415 4041999 R molybdopterin ---> molybdopterin-guanine dinucleotide, protein Ar; molybdopterin-guanine dinucleotide synthase complement(4041415..4041999) Escherichia coli str. K-12 substr. MG1655 948349 NP_418295.1 CDS yihD NC_000913.3 4042069 4042338 D DUF1040 protein YihD 4042069..4042338 Escherichia coli str. K-12 substr. MG1655 948348 NP_418296.1 CDS srkA NC_000913.3 4042415 4043401 D stress response kinase A; MazF antagonist; Thr/Ser kinase involved in Cpx stress response 4042415..4043401 Escherichia coli str. K-12 substr. MG1655 948346 NP_418297.1 CDS dsbA NC_000913.3 4043418 4044044 D protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction; periplasmic protein disulfide isomerase I 4043418..4044044 Escherichia coli str. K-12 substr. MG1655 948353 NP_418298.4 CDS yihF NC_000913.3 4044199 4045629 D putative GTP-binding protein; DUF945 family protein 4044199..4045629 Escherichia coli str. K-12 substr. MG1655 948352 NP_418299.1 CDS yihG NC_000913.3 4045670 4046602 R putative endonuclease; inner membrane protein, inner membrane acyltransferase complement(4045670..4046602) Escherichia coli str. K-12 substr. MG1655 948350 NP_418300.1 CDS polA NC_000913.3 4046966 4049752 D DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3' --> 5' exonuclease; fused DNA polymerase I 5'->3' polymerase/3'->5' exonuclease/5'->3' exonuclease 4046966..4049752 Escherichia coli str. K-12 substr. MG1655 948356 NP_418301.3 CDS yihA NC_000913.3 4050133 4050765 R GTPase essential for cell cycle; cell division GTP-binding protein complement(4050133..4050765) Escherichia coli str. K-12 substr. MG1655 948358 NP_418302.1 CDS yihI NC_000913.3 4051347 4051856 D activator of Der GTPase 4051347..4051856 Escherichia coli str. K-12 substr. MG1655 948363 NP_418303.2 CDS hemN NC_000913.3 4052045 4053418 D O2-independent coproporphyrinogen III oxidase; coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent 4052045..4053418 Escherichia coli str. K-12 substr. MG1655 948362 YP_002791260.1 CDS yshB NC_000913.3 4053647 4053757 R uncharacterized protein complement(4053647..4053757) Escherichia coli str. K-12 substr. MG1655 7751621 NP_418304.1 CDS glnG NC_000913.3 4053869 4055278 R response regulator for gln (sensor glnL) (nitrogen regulator I, NRI); fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein complement(4053869..4055278) Escherichia coli str. K-12 substr. MG1655 948361 NP_418305.1 CDS glnL NC_000913.3 4055290 4056339 R histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII); sensory histidine kinase in two-component regulatory system with GlnG complement(4055290..4056339) Escherichia coli str. K-12 substr. MG1655 948360 NP_418306.1 CDS glnA NC_000913.3 4056625 4058034 R glutamine synthetase complement(4056625..4058034) Escherichia coli str. K-12 substr. MG1655 948370 YP_026274.1 CDS typA NC_000913.3 4058407 4060230 D GTP-binding protein 4058407..4060230 Escherichia coli str. K-12 substr. MG1655 948369 NP_418308.1 CDS yihL NC_000913.3 4060447 4061157 D putative transcriptional regulator; putative DNA-binding transcriptional regulator 4060447..4061157 Escherichia coli str. K-12 substr. MG1655 948368 NP_418309.1 CDS yihM NC_000913.3 4061165 4062145 D putative sugar phosphate isomerase 4061165..4062145 Escherichia coli str. K-12 substr. MG1655 948367 NP_418310.1 CDS yihN NC_000913.3 4062247 4063512 D putative resistance protein (transport); MFS transporter family protein 4062247..4063512 Escherichia coli str. K-12 substr. MG1655 948365 NP_418311.1 CDS ompL NC_000913.3 4063603 4064295 R outer membrane porin L complement(4063603..4064295) Escherichia coli str. K-12 substr. MG1655 948366 YP_026275.1 CDS yihO NC_000913.3 4064363 4065766 R putative permease; putative transporter complement(4064363..4065766) Escherichia coli str. K-12 substr. MG1655 948377 NP_418313.4 CDS yihP NC_000913.3 4065809 4067194 R putative permease; putative transporter complement(4065809..4067194) Escherichia coli str. K-12 substr. MG1655 948371 NP_418314.1 CDS yihQ NC_000913.3 4067240 4069276 R putative glycosidase; alpha-glucosidase complement(4067240..4069276) Escherichia coli str. K-12 substr. MG1655 948376 NP_418315.3 CDS yihR NC_000913.3 4069475 4070401 R putative aldose-1-epimerase; mutarotase superfamily protein, YihR family complement(4069475..4070401) Escherichia coli str. K-12 substr. MG1655 948375 NP_418316.4 CDS yihS NC_000913.3 4070515 4071756 R aldose-ketose isomerase; D-mannose isomerase complement(4070515..4071756) Escherichia coli str. K-12 substr. MG1655 948374 NP_418317.1 CDS yihT NC_000913.3 4071773 4072651 R putative aldolase complement(4071773..4072651) Escherichia coli str. K-12 substr. MG1655 948373 NP_418318.1 CDS yihU NC_000913.3 4072675 4073571 R putative dehydrogenase; gamma-hydroxybutyrate dehydrogenase, NADH-dependent complement(4072675..4073571) Escherichia coli str. K-12 substr. MG1655 948372 NP_418319.2 CDS yihV NC_000913.3 4073739 4074635 D putative kinase; putative sugar kinase 4073739..4074635 Escherichia coli str. K-12 substr. MG1655 948382 NP_418320.2 CDS yihW NC_000913.3 4074669 4075454 D putative DEOR-type transcriptional regulator; DeoR family putative transcriptional regulator 4074669..4075454 Escherichia coli str. K-12 substr. MG1655 948381 NP_418321.4 CDS yihX NC_000913.3 4075553 4076152 D putative phosphatase; alpha-D-Glucose-1-P phosphatase, anomer-specific 4075553..4076152 Escherichia coli str. K-12 substr. MG1655 948380 NP_418322.1 CDS yihY NC_000913.3 4076146 4077018 D tRNA processing exoribonuclease BN; BrkB family putative transporter, inner membrane protein 4076146..4077018 Escherichia coli str. K-12 substr. MG1655 948379 NP_418323.1 CDS dtd NC_000913.3 4077015 4077452 D D-tyr-tRNA(Tyr) deacylase 4077015..4077452 Escherichia coli str. K-12 substr. MG1655 948378 NP_418324.1 CDS yiiD NC_000913.3 4077449 4078438 D putative acetyltransferase 4077449..4078438 Escherichia coli str. K-12 substr. MG1655 948387 NP_418325.3 CDS yiiE NC_000913.3 4079297 4079509 D CopG family putative transcriptional regulator 4079297..4079509 Escherichia coli str. K-12 substr. MG1655 948386 NP_418326.2 CDS yiiF NC_000913.3 4079751 4079969 D putative thymol sensitivity protein, CopG family putative transcriptional regulator 4079751..4079969 Escherichia coli str. K-12 substr. MG1655 948385 NP_418327.1 CDS fdhE NC_000913.3 4080299 4081228 R affects formate dehydrogenase-N; formate dehydrogenase formation protein complement(4080299..4081228) Escherichia coli str. K-12 substr. MG1655 948384 NP_418328.1 CDS fdoI NC_000913.3 4081225 4081860 R formate dehydrogenase, cytochrome B556 (FDO) subunit; formate dehydrogenase-O, cytochrome b556 subunit complement(4081225..4081860) Escherichia coli str. K-12 substr. MG1655 948383 NP_418329.1 CDS fdoH NC_000913.3 4081857 4082759 R formate dehydrogenase-O, iron-sulfur subunit; formate dehydrogenase-O, Fe-S subunit complement(4081857..4082759) Escherichia coli str. K-12 substr. MG1655 948395 NP_418330.1 CDS fdoG NC_000913.3 4082772 4085822 R formate dehydrogenase-O, major subunit; formate dehydrogenase-O, large subunit complement(4082772..4085822) Escherichia coli str. K-12 substr. MG1655 948394 NP_418331.1 CDS fdhD NC_000913.3 4086016 4086849 D affects formate dehydrogenase-N; formate dehydrogenase formation protein 4086016..4086849 Escherichia coli str. K-12 substr. MG1655 948393 NP_418332.1 CDS yiiG NC_000913.3 4087002 4088057 D DUF3829 family lipoprotein 4087002..4088057 Escherichia coli str. K-12 substr. MG1655 948392 NP_418333.1 CDS frvR NC_000913.3 4088107 4089855 R putative frv operon regulatory protein; putative frv operon regulator; contains a PTS EIIA domain complement(4088107..4089855) Escherichia coli str. K-12 substr. MG1655 948389 NP_418334.1 CDS frvX NC_000913.3 4089855 4090925 R frv operon protein; putative peptidase complement(4089855..4090925) Escherichia coli str. K-12 substr. MG1655 948388 NP_418335.4 CDS frvB NC_000913.3 4090915 4092366 R PTS system, fructose-like enzyme IIBC component; putative PTS enzyme, IIB component/IIC component complement(4090915..4092366) Escherichia coli str. K-12 substr. MG1655 948390 NP_418336.1 CDS frvA NC_000913.3 4092377 4092823 R PTS system, fructose-specific IIA component; putative enzyme IIA component of PTS complement(4092377..4092823) Escherichia coli str. K-12 substr. MG1655 948391 NP_418337.1 CDS rhaM NC_000913.3 4093124 4093438 R L-rhamnose mutarotase complement(4093124..4093438) Escherichia coli str. K-12 substr. MG1655 948402 NP_418338.1 CDS rhaD NC_000913.3 4093448 4094272 R rhamnulose-phosphate aldolase; rhamnulose-1-phosphate aldolase complement(4093448..4094272) Escherichia coli str. K-12 substr. MG1655 948401 YP_026276.1 CDS rhaA NC_000913.3 4094723 4095982 R L-rhamnose isomerase complement(4094723..4095982) Escherichia coli str. K-12 substr. MG1655 948400 NP_418340.1 CDS rhaB NC_000913.3 4095979 4097448 R rhamnulokinase complement(4095979..4097448) Escherichia coli str. K-12 substr. MG1655 948399 NP_418341.1 CDS rhaS NC_000913.3 4097736 4098572 D positive regulator for rhaBAD operon; transcriptional activator of rhaBAD and rhaT 4097736..4098572 Escherichia coli str. K-12 substr. MG1655 948397 NP_418342.2 CDS rhaR NC_000913.3 4098646 4099494 D positive regulator for rhaRS operon; transcriptional activator of rhaSR 4098646..4099494 Escherichia coli str. K-12 substr. MG1655 948396 NP_418343.1 CDS rhaT NC_000913.3 4099491 4100525 R rhamnose transport; L-rhamnose:proton symporter complement(4099491..4100525) Escherichia coli str. K-12 substr. MG1655 948398 NP_418344.3 CDS sodA NC_000913.3 4100810 4101430 D superoxide dismutase, manganese; superoxide dismutase, Mn 4100810..4101430 Escherichia coli str. K-12 substr. MG1655 948403 NP_418345.2 CDS kdgT NC_000913.3 4101690 4102673 D 2-keto-3-deoxy-D-gluconate transport system; 2-keto-3-deoxy-D-gluconate transporter 4101690..4102673 Escherichia coli str. K-12 substr. MG1655 948407 NP_418346.2 CDS yiiM NC_000913.3 4102822 4103496 D 6-N-hydroxylaminopurine resistance protein 4102822..4103496 Escherichia coli str. K-12 substr. MG1655 948406 NP_418347.1 CDS cpxA NC_000913.3 4103602 4104975 R probable sensor protein (histidine protein kinase), acting on arcA; sensory histidine kinase in two-component regulatory system with CpxR complement(4103602..4104975) Escherichia coli str. K-12 substr. MG1655 948405 NP_418348.1 CDS cpxR NC_000913.3 4104972 4105670 R transcriptional regulator in 2-component system; response regulator in two-component regulatory system with CpxA complement(4104972..4105670) Escherichia coli str. K-12 substr. MG1655 948404 YP_026277.1 CDS cpxP NC_000913.3 4105820 4106320 D periplasmic repressor of cpx regulon by interaction with CpxA; inhibitor of the cpx response; periplasmic adaptor protein 4105820..4106320 Escherichia coli str. K-12 substr. MG1655 2847688 NP_418350.1 CDS fieF NC_000913.3 4106469 4107371 D putative transport system permease protein; ferrous iron and zinc transporter 4106469..4107371 Escherichia coli str. K-12 substr. MG1655 948413 NP_418351.1 CDS pfkA NC_000913.3 4107552 4108514 D 6-phosphofructokinase I 4107552..4108514 Escherichia coli str. K-12 substr. MG1655 948412 NP_418352.1 CDS sbp NC_000913.3 4108834 4109823 D periplasmic sulfate-binding protein; periplasmic-binding component of ABC superfamily; sulfate transporter subunit 4108834..4109823 Escherichia coli str. K-12 substr. MG1655 948411 NP_418353.1 CDS cdh NC_000913.3 4109930 4110685 D CDP-diacylglycerol phosphotidylhydrolase 4109930..4110685 Escherichia coli str. K-12 substr. MG1655 948410 NP_418354.1 CDS tpiA NC_000913.3 4110740 4111507 R triosephosphate isomerase complement(4110740..4111507) Escherichia coli str. K-12 substr. MG1655 948409 NP_418355.1 CDS yiiQ NC_000913.3 4111615 4112214 R DUF1454 family putative periplasmic protein complement(4111615..4112214) Escherichia coli str. K-12 substr. MG1655 948408 NP_418356.1 CDS yiiR NC_000913.3 4112315 4112755 D DUF805 family putative inner membrane protein 4112315..4112755 Escherichia coli str. K-12 substr. MG1655 948417 NP_418357.1 CDS yiiS NC_000913.3 4112967 4113266 D UPF0381 family protein 4112967..4113266 Escherichia coli str. K-12 substr. MG1655 948416 NP_418358.1 CDS uspD NC_000913.3 4113293 4113721 D putative regulator; stress-induced protein 4113293..4113721 Escherichia coli str. K-12 substr. MG1655 948415 NP_418359.1 CDS fpr NC_000913.3 4113726 4114472 R ferredoxin-NADP reductase complement(4113726..4114472) Escherichia coli str. K-12 substr. MG1655 948414 NP_418360.1 CDS glpX NC_000913.3 4114569 4115579 R not required for growth on glycerol; fructose 1,6-bisphosphatase II complement(4114569..4115579) Escherichia coli str. K-12 substr. MG1655 948424 NP_418361.1 CDS glpK NC_000913.3 4115714 4117222 R glycerol kinase complement(4115714..4117222) Escherichia coli str. K-12 substr. MG1655 948423 NP_418362.1 CDS glpF NC_000913.3 4117245 4118090 R facilitated diffusion of glycerol; glycerol facilitator complement(4117245..4118090) Escherichia coli str. K-12 substr. MG1655 948422 NP_418363.1 CDS zapB NC_000913.3 4118515 4118760 D FtsZ stabilizer; septal ring assembly factor, stimulates cell division 4118515..4118760 Escherichia coli str. K-12 substr. MG1655 948420 NP_418364.1 CDS rraA NC_000913.3 4118845 4119330 R ribonuclease E (RNase E) inhibitor protein complement(4118845..4119330) Escherichia coli str. K-12 substr. MG1655 948419 NP_418365.1 CDS menA NC_000913.3 4119423 4120349 R 1,4-dihydroxy-2-naphthoate --> dimethylmenaquinone; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(4119423..4120349) Escherichia coli str. K-12 substr. MG1655 948418 NP_418366.1 CDS hslU NC_000913.3 4120416 4121747 R heat shock protein hslVU, ATPase subunit, homologous to chaperones; molecular chaperone and ATPase component of HslUV protease complement(4120416..4121747) Escherichia coli str. K-12 substr. MG1655 948430 NP_418367.1 CDS hslV NC_000913.3 4121757 4122287 R heat shock protein hslVU, proteasome-related peptidase subunit; peptidase component of the HslUV protease complement(4121757..4122287) Escherichia coli str. K-12 substr. MG1655 948429 NP_418368.1 CDS ftsN NC_000913.3 4122380 4123339 R essential cell division protein complement(4122380..4123339) Escherichia coli str. K-12 substr. MG1655 948428 NP_418369.1 CDS cytR NC_000913.3 4123431 4124456 R regulator for deo operon, udp, cdd, tsx, nupC, and nupG; Anti-activator for CytR-CRP nucleoside utilization regulon complement(4123431..4124456) Escherichia coli str. K-12 substr. MG1655 948427 NP_418370.1 CDS priA NC_000913.3 4124612 4126810 R primosomal protein N'(= factor Y)(putative helicase); Primosome factor n' (replication factor Y) complement(4124612..4126810) Escherichia coli str. K-12 substr. MG1655 948426 NP_418371.1 CDS rpmE NC_000913.3 4127013 4127225 D 50S ribosomal subunit protein L31 4127013..4127225 Escherichia coli str. K-12 substr. MG1655 948425 NP_418372.1 CDS yiiX NC_000913.3 4127286 4127894 R putative lipid binding hydrolase, DUF830 family protein complement(4127286..4127894) Escherichia coli str. K-12 substr. MG1655 948436 NP_418373.1 CDS metJ NC_000913.3 4128078 4128395 R repressor of all met genes but metF; transcriptional repressor, S-adenosylmethionine-binding complement(4128078..4128395) Escherichia coli str. K-12 substr. MG1655 948435 NP_418374.1 CDS metB NC_000913.3 4128672 4129832 D cystathionine gamma-synthase; cystathionine gamma-synthase, PLP-dependent 4128672..4129832 Escherichia coli str. K-12 substr. MG1655 948434 NP_418375.1 CDS metL NC_000913.3 4129835 4132267 D aspartokinase II and homoserine dehydrogenase II; Bifunctional aspartokinase/homoserine dehydrogenase 2 4129835..4132267 Escherichia coli str. K-12 substr. MG1655 948433 NP_418376.1 CDS metF NC_000913.3 4132616 4133506 D 5,10-methylenetetrahydrofolate reductase 4132616..4133506 Escherichia coli str. K-12 substr. MG1655 948432 NP_418377.1 CDS katG NC_000913.3 4133835 4136015 D catalase; hydroperoxidase HPI(I); catalase-peroxidase HPI, heme b-containing 4133835..4136015 Escherichia coli str. K-12 substr. MG1655 948431 NP_418378.4 CDS yijE NC_000913.3 4136108 4137013 D EamA-like transporter family protein 4136108..4137013 Escherichia coli str. K-12 substr. MG1655 948445 NP_418379.1 CDS yijF NC_000913.3 4137040 4137657 R DUF1287 family protein complement(4137040..4137657) Escherichia coli str. K-12 substr. MG1655 948441 NP_418380.4 CDS gldA NC_000913.3 4137932 4139035 R glycerol dehydrogenase, (NAD); glycerol dehydrogenase, NAD+ dependent; 1,2-propanediol:NAD+ oxidoreductase complement(4137932..4139035) Escherichia coli str. K-12 substr. MG1655 948440 NP_418381.1 CDS fsaB NC_000913.3 4139046 4139708 R fructose-6-phosphate aldolase 2 complement(4139046..4139708) Escherichia coli str. K-12 substr. MG1655 948439 YP_026278.1 CDS frwA NC_000913.3 4139720 4142221 R PEP-protein phosphotransferase system enzyme I; putative PTS enzyme, Hpr component/enzyme I component/enzyme IIA component complement(4139720..4142221) Escherichia coli str. K-12 substr. MG1655 948437 NP_418384.1 CDS frwC NC_000913.3 4142530 4143609 D PTS system, fructose-like enzyme II component; putative enzyme IIC component of PTS 4142530..4143609 Escherichia coli str. K-12 substr. MG1655 948448 NP_418385.1 CDS frwB NC_000913.3 4143624 4143944 D PTS system fructose-like IIB component 1; putative enzyme IIB component of PTS 4143624..4143944 Escherichia coli str. K-12 substr. MG1655 948447 NP_418386.1 CDS pflD NC_000913.3 4143995 4146292 D formate acetyltransferase 2; putative glycine radical domain-containing pyruvate formate-lyase 4143995..4146292 Escherichia coli str. K-12 substr. MG1655 948454 NP_418387.3 CDS pflC NC_000913.3 4146258 4147136 D probable pyruvate formate lyase activating enzyme 2; putative [formate-C-acetyltransferase 2]-activating enzyme; pyruvate formate-lyase 1-activating enzyme 4146258..4147136 Escherichia coli str. K-12 substr. MG1655 948453 NP_418388.1 CDS frwD NC_000913.3 4147138 4147479 D PTS system fructose-like IIB component 2; putative enzyme IIB component of PTS 4147138..4147479 Escherichia coli str. K-12 substr. MG1655 948452 NP_418389.1 CDS yijO NC_000913.3 4147466 4148317 R putative ARAC-type regulatory protein; AraC family putative transcriptional activator complement(4147466..4148317) Escherichia coli str. K-12 substr. MG1655 948451 NP_418390.1 CDS eptC NC_000913.3 4148532 4150265 R LPS heptose I phosphoethanolamine transferase complement(4148532..4150265) Escherichia coli str. K-12 substr. MG1655 948458 NP_418391.1 CDS ppc NC_000913.3 4150447 4153098 R phosphoenolpyruvate carboxylase complement(4150447..4153098) Escherichia coli str. K-12 substr. MG1655 948457 NP_418392.1 CDS argE NC_000913.3 4153696 4154847 R acetylornithine deacetylase complement(4153696..4154847) Escherichia coli str. K-12 substr. MG1655 948456 NP_418393.1 CDS argC NC_000913.3 4155001 4156005 D N-acetyl-gamma-glutamylphosphate reductase; N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding 4155001..4156005 Escherichia coli str. K-12 substr. MG1655 948455 NP_418394.3 CDS argB NC_000913.3 4156013 4156789 D acetylglutamate kinase 4156013..4156789 Escherichia coli str. K-12 substr. MG1655 948464 NP_418395.1 CDS argH NC_000913.3 4156850 4158223 D argininosuccinate lyase 4156850..4158223 Escherichia coli str. K-12 substr. MG1655 948463 NP_418396.1 CDS oxyR NC_000913.3 4158490 4159407 D activator, hydrogen peroxide-inducible genes; oxidative and nitrosative stress transcriptional regulator 4158490..4159407 Escherichia coli str. K-12 substr. MG1655 948462 NP_418397.2 CDS sthA NC_000913.3 4159390 4160790 R pyridine nucleotide transhydrogenase, soluble complement(4159390..4160790) Escherichia coli str. K-12 substr. MG1655 948461 NP_418398.2 CDS fabR NC_000913.3 4161124 4161771 D transcriptional repressor of fabA and fabB 4161124..4161771 Escherichia coli str. K-12 substr. MG1655 948460 NP_418399.1 CDS yijD NC_000913.3 4161771 4162130 D DUF1422 family inner membrane protein 4161771..4162130 Escherichia coli str. K-12 substr. MG1655 948459 NP_418400.1 CDS trmA NC_000913.3 4162170 4163270 R tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase complement(4162170..4163270) Escherichia coli str. K-12 substr. MG1655 947143 NP_418401.1 CDS btuB NC_000913.3 4163639 4165483 D outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23; vitamin B12/cobalamin outer membrane transporter 4163639..4165483 Escherichia coli str. K-12 substr. MG1655 948468 NP_418402.2 CDS murI NC_000913.3 4165428 4166285 D glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan; glutamate racemase 4165428..4166285 Escherichia coli str. K-12 substr. MG1655 948467 NP_418403.1 CDS murB NC_000913.3 4172057 4173085 D UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding 4172057..4173085 Escherichia coli str. K-12 substr. MG1655 948470 NP_418404.1 CDS birA NC_000913.3 4173082 4174047 D biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding 4173082..4174047 Escherichia coli str. K-12 substr. MG1655 948469 NP_418405.1 CDS coaA NC_000913.3 4174076 4175026 R pantothenate kinase complement(4174076..4175026) Escherichia coli str. K-12 substr. MG1655 948479 NP_418407.1 CDS tufB NC_000913.3 4175944 4177128 D translation elongation factor EF-Tu 2 4175944..4177128 Escherichia coli str. K-12 substr. MG1655 948482 NP_418408.1 CDS secE NC_000913.3 4177358 4177741 D preprotein translocase; preprotein translocase membrane subunit 4177358..4177741 Escherichia coli str. K-12 substr. MG1655 948486 NP_418409.1 CDS nusG NC_000913.3 4177743 4178288 D component in transcription antitermination; transcription termination factor 4177743..4178288 Escherichia coli str. K-12 substr. MG1655 948485 NP_418410.1 CDS rplK NC_000913.3 4178447 4178875 D 50S ribosomal subunit protein L11 4178447..4178875 Escherichia coli str. K-12 substr. MG1655 948484 NP_418411.1 CDS rplA NC_000913.3 4178879 4179583 D 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11; 50S ribosomal subunit protein L1 4178879..4179583 Escherichia coli str. K-12 substr. MG1655 948483 NP_418412.1 CDS rplJ NC_000913.3 4179996 4180493 D 50S ribosomal subunit protein L10 4179996..4180493 Escherichia coli str. K-12 substr. MG1655 948490 NP_418413.1 CDS rplL NC_000913.3 4180560 4180925 D 50S ribosomal subunit protein L7/L12 4180560..4180925 Escherichia coli str. K-12 substr. MG1655 948489 NP_418414.1 CDS rpoB NC_000913.3 4181245 4185273 D RNA polymerase, beta subunit 4181245..4185273 Escherichia coli str. K-12 substr. MG1655 948488 NP_418415.1 CDS rpoC NC_000913.3 4185350 4189573 D RNA polymerase, beta prime subunit 4185350..4189573 Escherichia coli str. K-12 substr. MG1655 948487 NP_418416.1 CDS yjaZ NC_000913.3 4189786 4190325 D heat shock protein htrC; stationary phase growth adaptation protein 4189786..4190325 Escherichia coli str. K-12 substr. MG1655 948495 NP_418417.1 CDS thiH NC_000913.3 4190735 4191868 R tyrosine lyase, involved in thiamine-thiazole moiety synthesis complement(4190735..4191868) Escherichia coli str. K-12 substr. MG1655 948494 NP_418418.2 CDS thiG NC_000913.3 4191865 4192635 R thiamin (thiazole moiety) biosynthesis protein; thiamine biosynthesis ThiGH complex subunit complement(4191865..4192635) Escherichia coli str. K-12 substr. MG1655 948493 YP_026279.1 CDS thiS NC_000913.3 4192637 4192837 R sulfur carrier protein; immediate sulfur donor in thiazole formation complement(4192637..4192837) Escherichia coli str. K-12 substr. MG1655 2847702 NP_418420.4 CDS thiF NC_000913.3 4192821 4193576 R adenylyltransferase; adenylyltransferase, modifies ThiS C-terminus complement(4192821..4193576) Escherichia coli str. K-12 substr. MG1655 948500 NP_418421.1 CDS thiE NC_000913.3 4193569 4194204 R thiamin-phosphate synthase (thiamine-phosphate pyrophosphorylase); thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) complement(4193569..4194204) Escherichia coli str. K-12 substr. MG1655 948491 NP_418422.1 CDS thiC NC_000913.3 4194204 4196099 R phosphomethylpyrimidine synthase complement(4194204..4196099) Escherichia coli str. K-12 substr. MG1655 948492 NP_418423.1 CDS rsd NC_000913.3 4196332 4196808 R stationary phase protein, binds sigma 70 RNA polymerase subunit complement(4196332..4196808) Escherichia coli str. K-12 substr. MG1655 948496 YP_026280.1 CDS nudC NC_000913.3 4196903 4197676 D NADH pyrophosphatase 4196903..4197676 Escherichia coli str. K-12 substr. MG1655 948498 NP_418425.1 CDS hemE NC_000913.3 4197716 4198780 D uroporphyrinogen decarboxylase 4197716..4198780 Escherichia coli str. K-12 substr. MG1655 948497 NP_418426.2 CDS nfi NC_000913.3 4198790 4199461 D endonuclease V (deoxyinosine 3'endoduclease); endonuclease V; deoxyinosine 3' endonuclease 4198790..4199461 Escherichia coli str. K-12 substr. MG1655 948502 NP_418427.1 CDS yjaG NC_000913.3 4199504 4200094 D DUF416 domain protein 4199504..4200094 Escherichia coli str. K-12 substr. MG1655 948501 NP_418428.1 CDS hupA NC_000913.3 4200281 4200553 D DNA-binding protein HU-alpha (HU-2); HU, DNA-binding transcriptional regulator, alpha subunit 4200281..4200553 Escherichia coli str. K-12 substr. MG1655 948499 NP_418429.1 CDS yjaH NC_000913.3 4200566 4201261 D DUF1481 family putative lipoprotein 4200566..4201261 Escherichia coli str. K-12 substr. MG1655 948508 NP_418430.2 CDS zraP NC_000913.3 4201263 4201688 R Zn-dependent periplasmic chaperone complement(4201263..4201688) Escherichia coli str. K-12 substr. MG1655 948507 NP_418431.1 CDS zraS NC_000913.3 4201926 4203323 D sensory histidine kinase in two-component regulatory system with ZraR 4201926..4203323 Escherichia coli str. K-12 substr. MG1655 948506 NP_418432.1 CDS zraR NC_000913.3 4203320 4204645 D fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein 4203320..4204645 Escherichia coli str. K-12 substr. MG1655 948505 NP_418433.1 CDS purD NC_000913.3 4204642 4205931 R phosphoribosylglycinamide synthetase = GAR synthetase; phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase complement(4204642..4205931) Escherichia coli str. K-12 substr. MG1655 948504 NP_418434.1 CDS purH NC_000913.3 4205943 4207532 R fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase complement(4205943..4207532) Escherichia coli str. K-12 substr. MG1655 948503 NP_418435.1 CDS yjaA NC_000913.3 4213234 4213617 D stress-induced protein 4213234..4213617 Escherichia coli str. K-12 substr. MG1655 948515 NP_418436.1 CDS yjaB NC_000913.3 4213680 4214123 R putative acetyltransferase complement(4213680..4214123) Escherichia coli str. K-12 substr. MG1655 948514 NP_418437.1 CDS metA NC_000913.3 4214280 4215209 D homoserine O-transsuccinylase 4214280..4215209 Escherichia coli str. K-12 substr. MG1655 948513 NP_418438.1 CDS aceB NC_000913.3 4215478 4217079 D malate synthase A 4215478..4217079 Escherichia coli str. K-12 substr. MG1655 948512 NP_418439.1 CDS aceA NC_000913.3 4217109 4218413 D isocitrate lyase 4217109..4218413 Escherichia coli str. K-12 substr. MG1655 948517 NP_418440.1 CDS aceK NC_000913.3 4218596 4220332 D isocitrate dehydrogenase kinase/phosphatase 4218596..4220332 Escherichia coli str. K-12 substr. MG1655 944797 NP_418441.1 CDS arpA NC_000913.3 4220301 4222487 R ankyrin repeat protein complement(4220301..4222487) Escherichia coli str. K-12 substr. MG1655 944933 NP_418442.2 CDS iclR NC_000913.3 4222804 4223628 R repressor of aceBA operon; transcriptional repressor complement(4222804..4223628) Escherichia coli str. K-12 substr. MG1655 948524 NP_418443.1 CDS metH NC_000913.3 4223828 4227511 D B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 4223828..4227511 Escherichia coli str. K-12 substr. MG1655 948522 NP_418444.1 CDS yjbB NC_000913.3 4227731 4229362 D putative alpha helix protein; putative Na+/Pi-cotransporter 4227731..4229362 Escherichia coli str. K-12 substr. MG1655 948521 NP_418445.1 CDS pepE NC_000913.3 4229453 4230142 R peptidase E, a dipeptidase where amino-terminal residue is aspartate; (alpha)-aspartyl dipeptidase complement(4229453..4230142) Escherichia coli str. K-12 substr. MG1655 948520 NP_418446.1 CDS rluF NC_000913.3 4230354 4231226 D 23S rRNA pseudouridine(2604) synthase 4230354..4231226 Escherichia coli str. K-12 substr. MG1655 948519 NP_418447.1 CDS yjbD NC_000913.3 4231359 4231631 R DUF3811 family protein complement(4231359..4231631) Escherichia coli str. K-12 substr. MG1655 948518 NP_418448.1 CDS lysC NC_000913.3 4231884 4233233 R aspartokinase III, lysine sensitive; lysine-sensitive aspartokinase 3 complement(4231884..4233233) Escherichia coli str. K-12 substr. MG1655 948531 NP_418449.1 CDS pgi NC_000913.3 4233758 4235407 D glucosephosphate isomerase 4233758..4235407 Escherichia coli str. K-12 substr. MG1655 948535 NP_418450.1 CDS yjbE NC_000913.3 4235906 4236148 D extracellular polysaccharide production threonine-rich protein 4235906..4236148 Escherichia coli str. K-12 substr. MG1655 948534 NP_418451.4 CDS yjbF NC_000913.3 4236262 4236900 D extracellular polysaccharide production lipoprotein 4236262..4236900 Escherichia coli str. K-12 substr. MG1655 948533 NP_418452.1 CDS yjbG NC_000913.3 4236897 4237634 D extracellular polysaccharide export OMA protein 4236897..4237634 Escherichia coli str. K-12 substr. MG1655 948526 NP_418453.1 CDS yjbH NC_000913.3 4237634 4239730 D DUF940 family extracellular polysaccharide protein 4237634..4239730 Escherichia coli str. K-12 substr. MG1655 948527 YP_001165332.1 CDS yjbT NC_000913.3 4239777 4240055 R putative periplasmic protein complement(4239777..4240055) Escherichia coli str. K-12 substr. MG1655 5061528 NP_418454.1 CDS psiE NC_000913.3 4240325 4240735 D phosphate starvation inducible protein 4240325..4240735 Escherichia coli str. K-12 substr. MG1655 948528 NP_418455.1 CDS xylE NC_000913.3 4240779 4242254 R xylose-proton symport; D-xylose transporter complement(4240779..4242254) Escherichia coli str. K-12 substr. MG1655 948529 NP_418456.1 CDS malG NC_000913.3 4242626 4243516 R part of maltose permease, inner membrane; membrane component of ABC superfamily; maltose transporter subunit complement(4242626..4243516) Escherichia coli str. K-12 substr. MG1655 948530 NP_418457.1 CDS malF NC_000913.3 4243531 4245075 R part of maltose permease, periplasmic; membrane component of ABC superfamily; maltose transporter subunit complement(4243531..4245075) Escherichia coli str. K-12 substr. MG1655 948532 NP_418458.1 CDS malE NC_000913.3 4245229 4246419 R periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis; periplasmic-binding component of ABC superfamily; maltose transporter subunit complement(4245229..4246419) Escherichia coli str. K-12 substr. MG1655 948538 NP_418459.1 CDS malK NC_000913.3 4246784 4247899 D ATP-binding component of transport system for maltose; fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein 4246784..4247899 Escherichia coli str. K-12 substr. MG1655 948537 NP_418460.1 CDS lamB NC_000913.3 4247971 4249311 D phage lambda receptor protein; maltose high-affinity receptor; maltose outer membrane porin (maltoporin) 4247971..4249311 Escherichia coli str. K-12 substr. MG1655 948548 NP_418461.1 CDS malM NC_000913.3 4249554 4250474 D periplasmic protein of mal regulon; maltose regulon periplasmic protein 4249554..4250474 Escherichia coli str. K-12 substr. MG1655 948547 b4038 CDS yjbI NC_000913.3 4250703 4252283 D pseudogene, SopA-related, pentapeptide repeats-containing; join(4250703..4250885,4250885..4250959,4250961..4252283) Escherichia coli str. K-12 substr. MG1655 948546 NP_418463.4 CDS ubiC NC_000913.3 4252506 4253003 D chorismate lyase; chorismate--pyruvate lyase 4252506..4253003 Escherichia coli str. K-12 substr. MG1655 948545 NP_418464.1 CDS ubiA NC_000913.3 4253016 4253888 D 4-hydroxybenzoate-octaprenyltransferase; p-hydroxybenzoate octaprenyltransferase 4253016..4253888 Escherichia coli str. K-12 substr. MG1655 948540 NP_418465.4 CDS plsB NC_000913.3 4254043 4256466 R glycerol-3-phosphate acyltransferase; glycerol-3-phosphate O-acyltransferase complement(4254043..4256466) Escherichia coli str. K-12 substr. MG1655 948541 NP_418466.1 CDS dgkA NC_000913.3 4256637 4257005 D diacylglycerol kinase 4256637..4257005 Escherichia coli str. K-12 substr. MG1655 948543 NP_418467.1 CDS lexA NC_000913.3 4257115 4257723 D regulator for SOS(lexA) regulon; transcriptional repressor of SOS regulon 4257115..4257723 Escherichia coli str. K-12 substr. MG1655 948544 NP_418468.3 CDS dinF NC_000913.3 4257742 4259121 D DNA-damage-inducible protein F; oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein 4257742..4259121 Escherichia coli str. K-12 substr. MG1655 948554 NP_418469.1 CDS yjbJ NC_000913.3 4259237 4259446 D stress-induced protein, UPF0337 family 4259237..4259446 Escherichia coli str. K-12 substr. MG1655 948553 NP_418470.4 CDS zur NC_000913.3 4259488 4260003 R transcriptional repressor, Zn(II)-binding complement(4259488..4260003) Escherichia coli str. K-12 substr. MG1655 948552 NP_418471.1 CDS yjbL NC_000913.3 4260321 4260575 D uncharacterized protein 4260321..4260575 Escherichia coli str. K-12 substr. MG1655 948551 NP_418472.1 CDS yjbM NC_000913.3 4260599 4261306 D uncharacterized protein 4260599..4261306 Escherichia coli str. K-12 substr. MG1655 948550 NP_418473.3 CDS dusA NC_000913.3 4261669 4262706 D tRNA-dihydrouridine synthase A 4261669..4262706 Escherichia coli str. K-12 substr. MG1655 948558 NP_418474.4 CDS pspG NC_000913.3 4262840 4263082 D phage shock protein G 4262840..4263082 Escherichia coli str. K-12 substr. MG1655 948557 NP_418475.1 CDS qorA NC_000913.3 4263248 4264231 R quinone oxidoreductase; quinone oxidoreductase, NADPH-dependent complement(4263248..4264231) Escherichia coli str. K-12 substr. MG1655 948556 NP_418476.1 CDS dnaB NC_000913.3 4264314 4265729 D replicative DNA helicase; part of primosome; replicative DNA helicase 4264314..4265729 Escherichia coli str. K-12 substr. MG1655 948555 NP_418477.1 CDS alr NC_000913.3 4265782 4266861 D alanine racemase 1; alanine racemase, biosynthetic, PLP-binding 4265782..4266861 Escherichia coli str. K-12 substr. MG1655 948564 NP_418478.1 CDS tyrB NC_000913.3 4267114 4268307 D tyrosine aminotransferase, tyrosine repressible; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent 4267114..4268307 Escherichia coli str. K-12 substr. MG1655 948563 YP_001165333.1 CDS yjbS NC_000913.3 4268809 4269012 R uncharacterized protein complement(4268809..4269012) Escherichia coli str. K-12 substr. MG1655 5061529 NP_418479.1 CDS aphA NC_000913.3 4269414 4270127 D diadenosine tetraphosphatase; acid phosphatase/phosphotransferase, class B, non-specific 4269414..4270127 Escherichia coli str. K-12 substr. MG1655 948562 NP_418480.1 CDS yjbQ NC_000913.3 4270238 4270654 D thiamine phosphate synthase 4270238..4270654 Escherichia coli str. K-12 substr. MG1655 948561 NP_418481.1 CDS yjbR NC_000913.3 4270658 4271014 D DUF419 family protein 4270658..4271014 Escherichia coli str. K-12 substr. MG1655 948560 NP_418482.1 CDS uvrA NC_000913.3 4271049 4273871 R excision nuclease subunit A; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC complement(4271049..4273871) Escherichia coli str. K-12 substr. MG1655 948559 NP_418483.1 CDS ssb NC_000913.3 4274125 4274661 D ssDNA-binding protein; single-stranded DNA-binding protein 4274125..4274661 Escherichia coli str. K-12 substr. MG1655 948570 NP_418484.4 CDS yjcB NC_000913.3 4274760 4275041 R putative inner membrane protein complement(4274760..4275041) Escherichia coli str. K-12 substr. MG1655 948569 NP_418485.1 CDS yjcC NC_000913.3 4275471 4277057 D putative membrane-anchored cyclic-di-GMP phosphodiesterase 4275471..4277057 Escherichia coli str. K-12 substr. MG1655 948568 NP_418486.1 CDS soxS NC_000913.3 4277060 4277383 R regulation of superoxide response regulon; superoxide response regulon transcriptional activator; autoregulator complement(4277060..4277383) Escherichia coli str. K-12 substr. MG1655 948567 NP_418487.1 CDS soxR NC_000913.3 4277469 4277933 D redox-sensing activator of soxS; redox-sensitive transcriptional activator of soxS; autorepressor 4277469..4277933 Escherichia coli str. K-12 substr. MG1655 948566 NP_418488.1 CDS yjcD NC_000913.3 4278479 4279828 D inner membrane putative guanine permease 4278479..4279828 Escherichia coli str. K-12 substr. MG1655 948565 NP_418489.1 CDS yjcE NC_000913.3 4279980 4281629 D putative cation/proton antiporter 4279980..4281629 Escherichia coli str. K-12 substr. MG1655 948577 NP_418490.1 CDS yjcF NC_000913.3 4281783 4283075 R pentapeptide repeats protein complement(4281783..4283075) Escherichia coli str. K-12 substr. MG1655 948576 NP_418491.1 CDS actP NC_000913.3 4283253 4284902 R acetate permease; also transports glycolate with a rate high enough to support growth on this carbon source; acetate transporter complement(4283253..4284902) Escherichia coli str. K-12 substr. MG1655 948575 NP_418492.1 CDS yjcH NC_000913.3 4284899 4285213 R DUF485 family inner membrane protein complement(4284899..4285213) Escherichia coli str. K-12 substr. MG1655 948574 NP_418493.1 CDS acs NC_000913.3 4285413 4287371 R acetyl-CoA synthetase complement(4285413..4287371) Escherichia coli str. K-12 substr. MG1655 948572 NP_418494.1 CDS nrfA NC_000913.3 4287764 4289200 D periplasmic cytochrome c(552): plays a role in nitrite reduction; nitrite reductase, formate-dependent, cytochrome 4287764..4289200 Escherichia coli str. K-12 substr. MG1655 948571 NP_418495.2 CDS nrfB NC_000913.3 4289245 4289811 D formate-dependent nitrite reductase; a penta-haeme cytochrome c; nitrite reductase, formate-dependent, penta-heme cytochrome c 4289245..4289811 Escherichia coli str. K-12 substr. MG1655 948573 NP_418496.1 CDS nrfC NC_000913.3 4289808 4290479 D formate-dependent nitrite reductase; Fe-S centers; formate-dependent nitrite reductase, 4Fe4S subunit 4289808..4290479 Escherichia coli str. K-12 substr. MG1655 948581 NP_418497.1 CDS nrfD NC_000913.3 4290476 4291432 D formate-dependent nitrate reductase complex; transmembrane protein; formate-dependent nitrite reductase, membrane subunit 4290476..4291432 Escherichia coli str. K-12 substr. MG1655 948580 NP_418498.1 CDS nrfE NC_000913.3 4291512 4293170 D formate-dependent nitrite reductase; possible assembly function; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE 4291512..4293170 Escherichia coli str. K-12 substr. MG1655 948579 NP_418499.1 CDS nrfF NC_000913.3 4293163 4293546 D part of formate-dependent nitrite reductase complex; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF 4293163..4293546 Escherichia coli str. K-12 substr. MG1655 948578 NP_418500.1 CDS nrfG NC_000913.3 4293543 4294139 D part of formate-dependent nitrite reductase complex; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG 4293543..4294139 Escherichia coli str. K-12 substr. MG1655 948592 NP_418501.1 CDS gltP NC_000913.3 4294481 4295794 D glutamate-aspartate symport protein; glutamate/aspartate:proton symporter 4294481..4295794 Escherichia coli str. K-12 substr. MG1655 948591 NP_418502.1 CDS yjcO NC_000913.3 4296436 4297125 R Sel1 family TPR-like repeat protein complement(4296436..4297125) Escherichia coli str. K-12 substr. MG1655 948586 NP_418503.1 CDS fdhF NC_000913.3 4297219 4299366 R selenopolypeptide subunit of formate dehydrogenase H; formate dehydrogenase-H, selenopolypeptide subunit complement(4297219..4299366) Escherichia coli str. K-12 substr. MG1655 948584 NP_418504.1 CDS mdtP NC_000913.3 4299564 4301030 R putative enzyme; outer membrane factor of efflux pump complement(4299564..4301030) Escherichia coli str. K-12 substr. MG1655 948583 NP_418505.2 CDS mdtO NC_000913.3 4301027 4303078 R putative enzyme; membrane translocase (MDR) of MdtNOP efflux pump, PET family complement(4301027..4303078) Escherichia coli str. K-12 substr. MG1655 948582 NP_418506.1 CDS mdtN NC_000913.3 4303078 4304109 R putative membrane protein; membrane fusion protein of efflux pump complement(4303078..4304109) Escherichia coli str. K-12 substr. MG1655 948598 YP_001165334.1 CDS ytcA NC_000913.3 4304128 4304403 R putative inner membrane DUF1656 family protein; efflux pump associated complement(4304128..4304403) Escherichia coli str. K-12 substr. MG1655 5061530 NP_418507.2 CDS yjcS NC_000913.3 4304612 4306597 R metallo-beta-lactamase superfamily protein complement(4304612..4306597) Escherichia coli str. K-12 substr. MG1655 948597 NP_418508.1 CDS alsK NC_000913.3 4306870 4307799 R D-allose kinase complement(4306870..4307799) Escherichia coli str. K-12 substr. MG1655 948596 NP_418509.1 CDS alsE NC_000913.3 4307783 4308478 R allulose-6-phosphate 3-epimerase complement(4307783..4308478) Escherichia coli str. K-12 substr. MG1655 948595 NP_418510.1 CDS alsC NC_000913.3 4308489 4309469 R membrane component of ABC superfamily; D-allose transporter subunit complement(4308489..4309469) Escherichia coli str. K-12 substr. MG1655 948594 NP_418511.1 CDS alsA NC_000913.3 4309448 4310980 R fused D-allose transporter subunits of ABC superfamily: ATP-binding components complement(4309448..4310980) Escherichia coli str. K-12 substr. MG1655 948593 NP_418512.1 CDS alsB NC_000913.3 4311107 4312042 R periplasmic-binding component of ABC superfamily; D-allose transporter subunit complement(4311107..4312042) Escherichia coli str. K-12 substr. MG1655 948604 NP_418513.4 CDS alsR NC_000913.3 4312101 4312991 R transcriptional repressor of rpiB expression; d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR complement(4312101..4312991) Escherichia coli str. K-12 substr. MG1655 948603 NP_418514.1 CDS rpiB NC_000913.3 4313350 4313799 D ribose 5-phosphate isomerase B; ribose 5-phosphate isomerase B/allose 6-phosphate isomerase 4313350..4313799 Escherichia coli str. K-12 substr. MG1655 948602 YP_026281.1 CDS yjdP NC_000913.3 4313868 4314197 D conserved hypothetical protein; conserved in EDL933 and CFT073; on opposite strand of the now deaccessioned phnQ (b4091); putative periplasmic protein 4313868..4314197 Escherichia coli str. K-12 substr. MG1655 2847754 NP_418516.1 CDS phnP NC_000913.3 4314344 4315102 R phosphonate metabolism; 5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase complement(4314344..4315102) Escherichia coli str. K-12 substr. MG1655 948600 NP_418517.1 CDS phnO NC_000913.3 4315104 4315538 R putative regulator, phn operon; aminoalkylphosphonate N-acetyltransferase complement(4315104..4315538) Escherichia coli str. K-12 substr. MG1655 948599 NP_418518.1 CDS phnN NC_000913.3 4315525 4316082 R ATP-binding component of phosphonate transport; ribose 1,5-bisphosphokinase complement(4315525..4316082) Escherichia coli str. K-12 substr. MG1655 948608 NP_418519.1 CDS phnM NC_000913.3 4316082 4317218 R phosphonate metabolism; ribophosphonate triphosphate hydrolase complement(4316082..4317218) Escherichia coli str. K-12 substr. MG1655 948613 NP_418520.1 CDS phnL NC_000913.3 4317215 4317895 R ATP-binding component of phosphonate transport; ribophosphonate triphosphate synthase subunit; putative ABC transporter ATP-binding protein complement(4317215..4317895) Escherichia coli str. K-12 substr. MG1655 948612 YP_026282.1 CDS phnK NC_000913.3 4318006 4318764 R ATP-binding component of phosphonate transport; carbon-phosphorus lyase complex subunit, putative ATP transporter ATP-binding protein complement(4318006..4318764) Escherichia coli str. K-12 substr. MG1655 948611 NP_418522.1 CDS phnJ NC_000913.3 4318761 4319606 R phosphonate metabolism; carbon-phosphorus lyase, SAM-dependent complement(4318761..4319606) Escherichia coli str. K-12 substr. MG1655 948606 NP_418523.1 CDS phnI NC_000913.3 4319599 4320663 R phosphonate metabolism; ribophosphonate triphosphate synthase complex putative catalytic subunit complement(4319599..4320663) Escherichia coli str. K-12 substr. MG1655 948605 NP_418524.1 CDS phnH NC_000913.3 4320663 4321247 R phosphonate metabolism; ribophosphonate triphosphate synthase subunit complement(4320663..4321247) Escherichia coli str. K-12 substr. MG1655 948619 NP_418525.1 CDS phnG NC_000913.3 4321244 4321696 R phosphonate metabolism; ribophosphonate triphosphate synthase subunit complement(4321244..4321696) Escherichia coli str. K-12 substr. MG1655 948618 NP_418526.1 CDS phnF NC_000913.3 4321697 4322422 R putative transcriptional regulator; putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation complement(4321697..4322422) Escherichia coli str. K-12 substr. MG1655 948617 b4104 CDS phnE NC_000913.3 4322443 4323230 R defective phosphonate ABC transporter permease;transport; Transport of small molecules: Anions; membrane channel protein component of Pn transporter; membrane component of ABC superfamily; complement(join(4322443..4322814,4322805..4323230)) Escherichia coli str. K-12 substr. MG1655 948625 NP_418529.1 CDS phnD NC_000913.3 4323336 4324352 R periplasmic binding protein component of Pn transporter; periplasmic binding component of ABC superfamily; phosphonate ABC transporter periplasmic binding protein complement(4323336..4324352) Escherichia coli str. K-12 substr. MG1655 948624 NP_418530.1 CDS phnC NC_000913.3 4324377 4325165 R ATP-binding component of phosphonate transport; ATP-binding component of ABC superfamily; phosphonate ABC transporter ATP-binding subunit complement(4324377..4325165) Escherichia coli str. K-12 substr. MG1655 948623 NP_418531.1 CDS yjdN NC_000913.3 4325298 4325741 R metalloprotein superfamily protein complement(4325298..4325741) Escherichia coli str. K-12 substr. MG1655 948622 NP_418532.1 CDS yjdM NC_000913.3 4326399 4326734 R zinc-ribbon family protein complement(4326399..4326734) Escherichia coli str. K-12 substr. MG1655 948621 NP_418533.1 CDS crfC NC_000913.3 4327135 4329363 D putative vimentin; clamp-binding sister replication fork colocalization protein, dynamin-related 4327135..4329363 Escherichia coli str. K-12 substr. MG1655 948620 NP_418534.4 CDS yjcZ NC_000913.3 4329360 4330238 D YjcZ family protein, mutational suppressor of yhjH motility mutation 4329360..4330238 Escherichia coli str. K-12 substr. MG1655 948633 NP_418535.1 CDS proP NC_000913.3 4330502 4332004 D low-affinity transport system; proline permease II; proline/glycine betaine transporter 4330502..4332004 Escherichia coli str. K-12 substr. MG1655 948626 YP_004831120.1 CDS pmrR NC_000913.3 4332116 4332205 D putative membrane-bound BasS regulator 4332116..4332205 Escherichia coli str. K-12 substr. MG1655 11115379 NP_418536.1 CDS basS NC_000913.3 4332181 4333272 R sensor protein for basR; sensory histidine kinase in two-component regulatory system with BasR complement(4332181..4333272) Escherichia coli str. K-12 substr. MG1655 948632 NP_418537.1 CDS basR NC_000913.3 4333282 4333950 R transcriptional regulatory protein, member of 2-component regulatory system; response regulator in two-component regulatory system with BasS complement(4333282..4333950) Escherichia coli str. K-12 substr. MG1655 948631 NP_418538.2 CDS eptA NC_000913.3 4333947 4335590 R lipid A phosphoethanolamine transferase complement(4333947..4335590) Escherichia coli str. K-12 substr. MG1655 948629 NP_418539.1 CDS adiC NC_000913.3 4335694 4337031 R putative amino acid/amine transport protein, cryptic; arginine:agmatine antiporter complement(4335694..4337031) Escherichia coli str. K-12 substr. MG1655 948628 NP_418540.1 CDS adiY NC_000913.3 4337168 4337929 R putative ARAC-type regulatory protein; adi system transcriptional activator complement(4337168..4337929) Escherichia coli str. K-12 substr. MG1655 948627 NP_418541.2 CDS adiA NC_000913.3 4338254 4340521 R arginine decarboxylase complement(4338254..4340521) Escherichia coli str. K-12 substr. MG1655 948638 NP_418542.1 CDS melR NC_000913.3 4340720 4341628 R regulator of melibiose operon; melibiose operon transcriptional regulator; autoregulator complement(4340720..4341628) Escherichia coli str. K-12 substr. MG1655 948637 NP_418543.1 CDS melA NC_000913.3 4341911 4343266 D alpha-galactosidase; alpha-galactosidase, NAD(P)-binding 4341911..4343266 Escherichia coli str. K-12 substr. MG1655 948636 NP_418544.2 CDS melB NC_000913.3 4343369 4344790 D melibiose permease II; melibiose:sodium symporter 4343369..4344790 Escherichia coli str. K-12 substr. MG1655 948635 NP_418545.1 CDS yjdF NC_000913.3 4344929 4345558 R DUF2238 family inner membrane protein complement(4344929..4345558) Escherichia coli str. K-12 substr. MG1655 948634 NP_418546.1 CDS fumB NC_000913.3 4345680 4347326 R fumarase B= fumarate hydratase Class I; anaerobic isozyme; anaerobic class I fumarate hydratase (fumarase B) complement(4345680..4347326) Escherichia coli str. K-12 substr. MG1655 948642 NP_418547.1 CDS dcuB NC_000913.3 4347404 4348744 R anaerobic dicarboxylate transport; C4-dicarboxylate transporter, anaerobic; DcuS co-sensor complement(4347404..4348744) Escherichia coli str. K-12 substr. MG1655 948641 NP_418548.1 CDS dcuR NC_000913.3 4349315 4350034 R response regulator in two-component regulatory system with DcuS complement(4349315..4350034) Escherichia coli str. K-12 substr. MG1655 948640 NP_418549.1 CDS dcuS NC_000913.3 4350031 4351662 R sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration complement(4350031..4351662) Escherichia coli str. K-12 substr. MG1655 948639 NP_418550.1 CDS yjdI NC_000913.3 4351843 4352073 D putative 4Fe-4S mono-cluster protein 4351843..4352073 Escherichia coli str. K-12 substr. MG1655 948648 NP_418551.1 CDS yjdJ NC_000913.3 4352085 4352357 D putative acyl-CoA transferase 4352085..4352357 Escherichia coli str. K-12 substr. MG1655 948647 NP_418552.1 CDS yjdK NC_000913.3 4352584 4352880 D uncharacterized protein 4352584..4352880 Escherichia coli str. K-12 substr. MG1655 948646 YP_588474.1 CDS yjdO NC_000913.3 4352908 4353081 D uncharacterized protein 4352908..4353081 Escherichia coli str. K-12 substr. MG1655 1450308 NP_418553.1 CDS lysU NC_000913.3 4353200 4354717 R lysine tRNA synthetase, inducible; heat shock protein; lysine tRNA synthetase, inducible complement(4353200..4354717) Escherichia coli str. K-12 substr. MG1655 948645 NP_418554.1 CDS dtpC NC_000913.3 4354954 4356411 R putative peptide transporter; dipeptide and tripeptide permease complement(4354954..4356411) Escherichia coli str. K-12 substr. MG1655 948644 NP_418555.1 CDS cadA NC_000913.3 4356470 4358617 R lysine decarboxylase, acid-inducible complement(4356470..4358617) Escherichia coli str. K-12 substr. MG1655 948643 NP_418556.1 CDS cadB NC_000913.3 4358697 4360031 R transport of lysine/cadaverine; putative lysine/cadaverine transporter complement(4358697..4360031) Escherichia coli str. K-12 substr. MG1655 948654 NP_418557.1 CDS cadC NC_000913.3 4360396 4361934 R transcriptional activator of cad operon; cadBA operon transcriptional activator complement(4360396..4361934) Escherichia coli str. K-12 substr. MG1655 948653 b4654 CDS yjdQ NC_000913.3 4362191 4362353 R pseudogene, P4-like integrase remnant; complement(join(4362191..4362271,4362270..4362353)) Escherichia coli str. K-12 substr. MG1655 5625580 NP_418558.2 CDS yjdC NC_000913.3 4362733 4363308 R putative transcriptional regulator complement(4362733..4363308) Escherichia coli str. K-12 substr. MG1655 948650 NP_418559.1 CDS dsbD NC_000913.3 4363345 4365042 R thiol:disulfide interchange protein; copper tolerance; fused thiol:disulfide interchange protein: activator of DsbC/conserved protein complement(4363345..4365042) Escherichia coli str. K-12 substr. MG1655 948649 NP_418560.1 CDS cutA NC_000913.3 4365018 4365356 R divalent cation tolerance protein; cytochrome c biogenesis; divalent-cation tolerance protein, copper sensitivity complement(4365018..4365356) Escherichia coli str. K-12 substr. MG1655 948660 NP_418561.1 CDS dcuA NC_000913.3 4365472 4366773 R anaerobic dicarboxylate transport; C4-dicarboxylate antiporter complement(4365472..4366773) Escherichia coli str. K-12 substr. MG1655 948659 NP_418562.4 CDS aspA NC_000913.3 4366891 4368327 R aspartate ammonia-lyase (aspartase); aspartate ammonia-lyase complement(4366891..4368327) Escherichia coli str. K-12 substr. MG1655 948658 NP_418564.2 CDS fxsA NC_000913.3 4368664 4369140 D suppressor of F exclusion of phage T7 4368664..4369140 Escherichia coli str. K-12 substr. MG1655 948657 NP_418565.1 CDS yjeH NC_000913.3 4369156 4370412 R putative transport; putative transporter complement(4369156..4370412) Escherichia coli str. K-12 substr. MG1655 948656 NP_418566.1 CDS groS NC_000913.3 4370688 4370981 D GroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity; Cpn10 chaperonin GroES, small subunit of GroESL 4370688..4370981 Escherichia coli str. K-12 substr. MG1655 948655 NP_418567.1 CDS groL NC_000913.3 4371025 4372671 D Cpn60 chaperonin GroEL, large subunit of GroESL 4371025..4372671 Escherichia coli str. K-12 substr. MG1655 948665 NP_418568.2 CDS yjeI NC_000913.3 4372809 4373162 D DUF4156 family lipoprotein 4372809..4373162 Escherichia coli str. K-12 substr. MG1655 948664 NP_418569.1 CDS yjeJ NC_000913.3 4373365 4374234 R uncharacterized protein complement(4373365..4374234) Escherichia coli str. K-12 substr. MG1655 948663 NP_418570.1 CDS epmB NC_000913.3 4374629 4375657 R EF-P-Lys34 lysylation protein; weak lysine 2,3-aminomutase complement(4374629..4375657) Escherichia coli str. K-12 substr. MG1655 948662 NP_418571.1 CDS efp NC_000913.3 4375699 4376265 D elongation factor P (EF-P); polyproline-specific translation elongation factor EF-P 4375699..4376265 Escherichia coli str. K-12 substr. MG1655 948661 YP_026283.1 CDS ecnA NC_000913.3 4376317 4376442 D entericidin A; antidote to lipoprotein entericidin B; component of a chromosomally encoded addiction module; entericidin A membrane lipoprotein, antidote entericidin B 4376317..4376442 Escherichia coli str. K-12 substr. MG1655 2847736 YP_026284.1 CDS ecnB NC_000913.3 4376553 4376699 D entericidin B; bacteriolytic lipoprotein; component of a chromosomally encoded addiction module; entericidin B membrane lipoprotein 4376553..4376699 Escherichia coli str. K-12 substr. MG1655 2847737 NP_418572.4 CDS sugE NC_000913.3 4376875 4377192 D suppresses groEL, may be chaperone; multidrug efflux system protein 4376875..4377192 Escherichia coli str. K-12 substr. MG1655 948671 NP_418573.1 CDS blc NC_000913.3 4377189 4377722 R outer membrane lipoprotein (lipocalin), cell division and growth function complement(4377189..4377722) Escherichia coli str. K-12 substr. MG1655 948670 NP_418574.1 CDS ampC NC_000913.3 4377811 4378944 R beta-lactamase; penicillin resistance; penicillin-binding protein; beta-lactamase, intrinsically weak complement(4377811..4378944) Escherichia coli str. K-12 substr. MG1655 948669 NP_418575.1 CDS frdD NC_000913.3 4379007 4379366 R fumarate reductase, anaerobic, membrane anchor polypeptide; fumarate reductase (anaerobic), membrane anchor subunit complement(4379007..4379366) Escherichia coli str. K-12 substr. MG1655 948668 NP_418576.1 CDS frdC NC_000913.3 4379377 4379772 R fumarate reductase, anaerobic, membrane anchor polypeptide; fumarate reductase (anaerobic), membrane anchor subunit complement(4379377..4379772) Escherichia coli str. K-12 substr. MG1655 948680 NP_418577.1 CDS frdB NC_000913.3 4379783 4380517 R fumarate reductase, anaerobic, iron-sulfur protein subunit; fumarate reductase (anaerobic), Fe-S subunit complement(4379783..4380517) Escherichia coli str. K-12 substr. MG1655 948666 NP_418578.1 CDS frdA NC_000913.3 4380510 4382318 R fumarate reductase, anaerobic, flavoprotein subunit; fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit complement(4380510..4382318) Escherichia coli str. K-12 substr. MG1655 948667 NP_418579.2 CDS epmA NC_000913.3 4382643 4383620 D putative lysyl-tRNA synthetase; Elongation Factor P Lys34 lysyltransferase 4382643..4383620 Escherichia coli str. K-12 substr. MG1655 948672 NP_418580.2 CDS yjeM NC_000913.3 4383839 4385341 D putative transport; putative transporter 4383839..4385341 Escherichia coli str. K-12 substr. MG1655 948679 NP_418581.1 CDS yjeN NC_000913.3 4385393 4385707 D uncharacterized protein 4385393..4385707 Escherichia coli str. K-12 substr. MG1655 948678 NP_418582.1 CDS yjeO NC_000913.3 4385704 4386018 D inner membrane protein 4385704..4386018 Escherichia coli str. K-12 substr. MG1655 948677 NP_418583.1 CDS mscM NC_000913.3 4386047 4389370 R putative periplasmic binding protein; mechanosensitive channel protein, miniconductance complement(4386047..4389370) Escherichia coli str. K-12 substr. MG1655 948676 NP_418584.1 CDS psd NC_000913.3 4389392 4390360 R phosphatidylserine decarboxylase; phospholipid synthesis; phosphatidylserine decarboxylase complement(4389392..4390360) Escherichia coli str. K-12 substr. MG1655 948673 NP_418585.4 CDS rsgA NC_000913.3 4390457 4391509 R ribosome small subunit-dependent GTPase A complement(4390457..4391509) Escherichia coli str. K-12 substr. MG1655 948674 NP_418586.4 CDS orn NC_000913.3 4391604 4392149 D oligoribonuclease 4391604..4392149 Escherichia coli str. K-12 substr. MG1655 948675 YP_002791261.1 CDS yjeV NC_000913.3 4392892 4392945 D uncharacterized protein 4392892..4392945 Escherichia coli str. K-12 substr. MG1655 7751630 NP_418587.1 CDS queG NC_000913.3 4392928 4394067 R epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis complement(4392928..4394067) Escherichia coli str. K-12 substr. MG1655 948686 NP_418588.1 CDS nnr NC_000913.3 4394066 4395613 D bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase 4394066..4395613 Escherichia coli str. K-12 substr. MG1655 948685 NP_418589.1 CDS tsaE NC_000913.3 4395585 4396046 D tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein 4395585..4396046 Escherichia coli str. K-12 substr. MG1655 948684 NP_418590.1 CDS amiB NC_000913.3 4396065 4397402 D N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase; N-acetylmuramoyl-l-alanine amidase II 4396065..4397402 Escherichia coli str. K-12 substr. MG1655 948683 NP_418591.1 CDS mutL NC_000913.3 4397412 4399259 D enzyme in methyl-directed mismatch repair; methyl-directed mismatch repair protein 4397412..4399259 Escherichia coli str. K-12 substr. MG1655 948691 NP_418592.1 CDS miaA NC_000913.3 4399252 4400202 D delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase 4399252..4400202 Escherichia coli str. K-12 substr. MG1655 948690 NP_418593.1 CDS hfq NC_000913.3 4400288 4400596 D host factor I for bacteriophage Q beta replication, a growth-related protein; global sRNA chaperone; HF-I, host factor for RNA phage Q beta replication 4400288..4400596 Escherichia coli str. K-12 substr. MG1655 948689 NP_418594.1 CDS hflX NC_000913.3 4400672 4401952 D GTP - binding subunit of protease specific for phage lambda cII repressor; GTPase, stimulated by 50S subunit binding 4400672..4401952 Escherichia coli str. K-12 substr. MG1655 948688 NP_418595.1 CDS hflK NC_000913.3 4402038 4403297 D protease specific for phage lambda cII repressor; modulator for HflB protease specific for phage lambda cII repressor 4402038..4403297 Escherichia coli str. K-12 substr. MG1655 948698 NP_418596.1 CDS hflC NC_000913.3 4403300 4404304 D protease specific for phage lambda cII repressor; modulator for HflB protease specific for phage lambda cII repressor 4403300..4404304 Escherichia coli str. K-12 substr. MG1655 948697 NP_418597.1 CDS yjeT NC_000913.3 4404386 4404583 D DUF2065 family protein 4404386..4404583 Escherichia coli str. K-12 substr. MG1655 948696 NP_418598.1 CDS purA NC_000913.3 4404687 4405985 D adenylosuccinate synthetase 4404687..4405985 Escherichia coli str. K-12 substr. MG1655 948695 NP_418599.1 CDS nsrR NC_000913.3 4406190 4406615 D nitric oxide-sensitive repressor for NO regulon 4406190..4406615 Escherichia coli str. K-12 substr. MG1655 948693 NP_418600.4 CDS rnr NC_000913.3 4406654 4409095 D exoribonuclease R, RNase R 4406654..4409095 Escherichia coli str. K-12 substr. MG1655 948692 NP_418601.1 CDS rlmB NC_000913.3 4409275 4410006 D 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent 4409275..4410006 Escherichia coli str. K-12 substr. MG1655 948694 NP_418602.1 CDS yjfI NC_000913.3 4410133 4410534 D DUF2170 family protein 4410133..4410534 Escherichia coli str. K-12 substr. MG1655 948704 NP_418603.1 CDS yjfJ NC_000913.3 4410553 4411251 D putative alpha helical protein; PspA/IM30 family protein 4410553..4411251 Escherichia coli str. K-12 substr. MG1655 948703 NP_418604.1 CDS yjfK NC_000913.3 4411302 4411961 D DUF2491 family protein 4411302..4411961 Escherichia coli str. K-12 substr. MG1655 948702 NP_418605.1 CDS yjfL NC_000913.3 4411979 4412377 D UPF0719 family inner membrane protein 4411979..4412377 Escherichia coli str. K-12 substr. MG1655 948701 NP_418606.1 CDS yjfM NC_000913.3 4412387 4413025 D DUF1190 family protein 4412387..4413025 Escherichia coli str. K-12 substr. MG1655 948700 NP_418607.1 CDS yjfC NC_000913.3 4413028 4414191 D putative synthetase/amidase; ATP-Grasp family ATPase 4413028..4414191 Escherichia coli str. K-12 substr. MG1655 948699 NP_418608.6 CDS aidB NC_000913.3 4414275 4415900 D putative acyl coenzyme A dehydrogenase; DNA alkylation damage repair protein; flavin-containing DNA binding protein, weak isovaleryl CoA dehydrogenase 4414275..4415900 Escherichia coli str. K-12 substr. MG1655 948710 NP_418609.4 CDS yjfN NC_000913.3 4416017 4416292 R DUF1471 family periplasmic protein complement(4416017..4416292) Escherichia coli str. K-12 substr. MG1655 948709 NP_418610.4 CDS bsmA NC_000913.3 4416441 4416770 R bioflm peroxide resistance protein complement(4416441..4416770) Escherichia coli str. K-12 substr. MG1655 948708 NP_418611.1 CDS yjfP NC_000913.3 4416952 4417701 D acyl CoA esterase 4416952..4417701 Escherichia coli str. K-12 substr. MG1655 948707 NP_418612.1 CDS ulaR NC_000913.3 4417698 4418453 R putative DEOR-type transcriptional regulator; transcriptional repressor for the L-ascorbate utilization (ula) divergent operon complement(4417698..4418453) Escherichia coli str. K-12 substr. MG1655 948706 NP_418613.2 CDS ulaG NC_000913.3 4418561 4419625 R L-ascorbate 6-phosphate lactonase complement(4418561..4419625) Escherichia coli str. K-12 substr. MG1655 948705 NP_418614.4 CDS ulaA NC_000913.3 4419980 4421377 D L-ascorbate-specific enzyme IIC permease component of PTS 4419980..4421377 Escherichia coli str. K-12 substr. MG1655 948717 NP_418615.1 CDS ulaB NC_000913.3 4421393 4421698 D L-ascorbate-specific enzyme IIB component of PTS 4421393..4421698 Escherichia coli str. K-12 substr. MG1655 948716 NP_418616.1 CDS ulaC NC_000913.3 4421708 4422172 D putative PTS system enzyme II A component; L-ascorbate-specific enzyme IIA component of PTS 4421708..4422172 Escherichia coli str. K-12 substr. MG1655 948715 NP_418617.1 CDS ulaD NC_000913.3 4422186 4422836 D probable hexulose-6-phosphate synthase; 3-keto-L-gulonate 6-phosphate decarboxylase 4422186..4422836 Escherichia coli str. K-12 substr. MG1655 948714 NP_418618.1 CDS ulaE NC_000913.3 4422846 4423700 D putative hexulose-6-phosphate isomerase; L-xylulose 5-phosphate 3-epimerase 4422846..4423700 Escherichia coli str. K-12 substr. MG1655 948712 NP_418619.1 CDS ulaF NC_000913.3 4423700 4424386 D putative epimerase/aldolase; L-ribulose 5-phosphate 4-epimerase 4423700..4424386 Escherichia coli str. K-12 substr. MG1655 948711 NP_418620.1 CDS yjfY NC_000913.3 4424516 4424791 R YhcN family protein, periplasmic complement(4424516..4424791) Escherichia coli str. K-12 substr. MG1655 948713 NP_418621.5 CDS rpsF NC_000913.3 4425118 4425513 D 30S ribosomal subunit protein S6 4425118..4425513 Escherichia coli str. K-12 substr. MG1655 948723 NP_418622.1 CDS priB NC_000913.3 4425520 4425834 D primosomal replication protein N; primosomal protein N 4425520..4425834 Escherichia coli str. K-12 substr. MG1655 948722 NP_418623.1 CDS rpsR NC_000913.3 4425839 4426066 D 30S ribosomal subunit protein S18 4425839..4426066 Escherichia coli str. K-12 substr. MG1655 948721 NP_418624.1 CDS rplI NC_000913.3 4426108 4426557 D 50S ribosomal subunit protein L9 4426108..4426557 Escherichia coli str. K-12 substr. MG1655 948720 NP_418625.1 CDS yjfZ NC_000913.3 4426628 4427422 R uncharacterized protein complement(4426628..4427422) Escherichia coli str. K-12 substr. MG1655 948719 b4205 CDS ytfA NC_000913.3 4427694 4428095 D pseudogene, related to transcriptional regulators; 4427694..4428095 Escherichia coli str. K-12 substr. MG1655 948718 NP_418627.4 CDS ytfB NC_000913.3 4428079 4428717 R OapA family protein complement(4428079..4428717) Escherichia coli str. K-12 substr. MG1655 948727 NP_418628.4 CDS fklB NC_000913.3 4428935 4429555 D FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase); FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 4428935..4429555 Escherichia coli str. K-12 substr. MG1655 948726 NP_418629.1 CDS cycA NC_000913.3 4429864 4431276 D transport of D-alanine, D-serine, and glycine; D-alanine/D-serine/glycine transporter 4429864..4431276 Escherichia coli str. K-12 substr. MG1655 948725 NP_418630.1 CDS ytfE NC_000913.3 4431321 4431983 R iron-sulfur cluster repair protein RIC complement(4431321..4431983) Escherichia coli str. K-12 substr. MG1655 948724 NP_418631.2 CDS ytfF NC_000913.3 4432091 4433056 R putative transmembrane subunit; DMT transporter family inner membrane protein complement(4432091..4433056) Escherichia coli str. K-12 substr. MG1655 948732 NP_418632.1 CDS qorB NC_000913.3 4433164 4434024 R putative oxidoreductase; NAD(P)H:quinone oxidoreductase complement(4433164..4434024) Escherichia coli str. K-12 substr. MG1655 948731 NP_418633.4 CDS ytfH NC_000913.3 4434113 4434493 D DUF24 family HxlR-type putative transcriptional regulator 4434113..4434493 Escherichia coli str. K-12 substr. MG1655 948730 NP_418634.1 CDS cpdB NC_000913.3 4434622 4436565 R 2':3'-cyclic-nucleotide 2'-phosphodiesterase complement(4434622..4436565) Escherichia coli str. K-12 substr. MG1655 948729 NP_418635.1 CDS cysQ NC_000913.3 4436755 4437495 D affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis; 3'(2'),5'-bisphosphate nucleotidase 4436755..4437495 Escherichia coli str. K-12 substr. MG1655 948728 YP_026285.1 CDS ytfI NC_000913.3 4437707 4438645 D uncharacterized protein 4437707..4438645 Escherichia coli str. K-12 substr. MG1655 948738 NP_418637.1 CDS ytfJ NC_000913.3 4438708 4439262 R putative transcriptional regulator complement(4438708..4439262) Escherichia coli str. K-12 substr. MG1655 948737 NP_418638.2 CDS ytfK NC_000913.3 4439587 4439793 D DUF1107 family protein 4439587..4439793 Escherichia coli str. K-12 substr. MG1655 948736 NP_418639.1 CDS ytfL NC_000913.3 4439872 4441215 R putative transport protein; UPF0053 family inner membrane protein complement(4439872..4441215) Escherichia coli str. K-12 substr. MG1655 948735 NP_418640.1 CDS msrA NC_000913.3 4441538 4442176 R peptide methionine sulfoxide reductase; methionine sulfoxide reductase A complement(4441538..4442176) Escherichia coli str. K-12 substr. MG1655 948734 NP_418641.1 CDS tamA NC_000913.3 4442382 4444115 D translocation and assembly module for autotransporter export, outer membrane subunit 4442382..4444115 Escherichia coli str. K-12 substr. MG1655 948733 NP_418642.1 CDS tamB NC_000913.3 4444112 4447891 D translocation and assembly module for autotransporter export, inner membrane subunit 4444112..4447891 Escherichia coli str. K-12 substr. MG1655 948742 NP_418643.1 CDS ytfP NC_000913.3 4447894 4448235 D GGCT-like protein 4447894..4448235 Escherichia coli str. K-12 substr. MG1655 948741 NP_418645.2 CDS chpS NC_000913.3 4448447 4448698 D suppressor of inhibitory function of ChpB, PemI-like, autoregulated; antitoxin of the ChpBS toxin-antitoxin system 4448447..4448698 Escherichia coli str. K-12 substr. MG1655 948739 NP_418646.1 CDS chpB NC_000913.3 4448692 4449042 D probable growth inhibitor, PemK-like, autoregulated; toxin of the ChpB-ChpS toxin-antitoxin system 4448692..4449042 Escherichia coli str. K-12 substr. MG1655 948747 NP_418647.1 CDS ppa NC_000913.3 4449122 4449652 R inorganic pyrophosphatase complement(4449122..4449652) Escherichia coli str. K-12 substr. MG1655 948748 NP_418648.1 CDS ytfQ NC_000913.3 4449962 4450918 D putative LACI-type transcriptional regulator; galactofuranose binding proteint: periplasmic-binding component of ABC superfamily 4449962..4450918 Escherichia coli str. K-12 substr. MG1655 948746 YP_026286.1 CDS ytfR NC_000913.3 4451058 4452560 D putative sugar transport protein (ABC superfamily, atp_bind); putative ABC superfamily sugar transporter ATP-binding subunit 4451058..4452560 Escherichia coli str. K-12 substr. MG1655 2847725 NP_418651.3 CDS ytfT NC_000913.3 4452571 4453596 D putative transport system permease protein; inner membrane putative ABC superfamily sugar transporter permease 4452571..4453596 Escherichia coli str. K-12 substr. MG1655 948743 NP_418652.2 CDS yjfF NC_000913.3 4453583 4454578 D putative transport system permease protein; inner membrane putative ABC superfamily sugar transporter permease 4453583..4454578 Escherichia coli str. K-12 substr. MG1655 948754 NP_418653.1 CDS fbp NC_000913.3 4454611 4455609 R fructose-1,6-bisphosphatase I complement(4454611..4455609) Escherichia coli str. K-12 substr. MG1655 948753 NP_418654.1 CDS mpl NC_000913.3 4455785 4457158 D UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4455785..4457158 Escherichia coli str. K-12 substr. MG1655 948752 NP_418655.1 CDS yjgA NC_000913.3 4457314 4457865 R putative alpha helix protein; ribosome-associated UPF0307 family protein complement(4457314..4457865) Escherichia coli str. K-12 substr. MG1655 948751 NP_418656.1 CDS pmbA NC_000913.3 4457959 4459311 D maturation of antibiotic MccB17, see tld genes; putative antibiotic peptide MccB17 maturation peptidase 4457959..4459311 Escherichia coli str. K-12 substr. MG1655 948750 b4236 CDS cybC NC_000913.3 4459490 4459855 D pseudogene, truncated cytochrome b562; cytochrome b(562); 4459490..4459855 Escherichia coli str. K-12 substr. MG1655 948758 NP_418658.1 CDS nrdG NC_000913.3 4459900 4460364 R anaerobic ribonucleotide reductase activating protein complement(4459900..4460364) Escherichia coli str. K-12 substr. MG1655 948757 NP_418659.1 CDS nrdD NC_000913.3 4460522 4462660 R anaerobic ribonucleoside-triphosphate reductase complement(4460522..4462660) Escherichia coli str. K-12 substr. MG1655 948755 NP_418660.1 CDS treC NC_000913.3 4463054 4464709 R trehalase 6-P hydrolase; trehalose-6-P hydrolase complement(4463054..4464709) Escherichia coli str. K-12 substr. MG1655 948762 NP_418661.1 CDS treB NC_000913.3 4464759 4466180 R PTS system enzyme II, trehalose specific; fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component complement(4464759..4466180) Escherichia coli str. K-12 substr. MG1655 948761 NP_418662.1 CDS treR NC_000913.3 4466299 4467246 R repressor of treA,B,C; trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor complement(4466299..4467246) Escherichia coli str. K-12 substr. MG1655 948760 YP_003933616.1 CDS mgtL NC_000913.3 4467431 4467484 D regulatory leader peptide for mgtA 4467431..4467484 Escherichia coli str. K-12 substr. MG1655 9797237 NP_418663.1 CDS mgtA NC_000913.3 4467625 4470321 D Mg2+ transport ATPase, P-type 1; magnesium transporter 4467625..4470321 Escherichia coli str. K-12 substr. MG1655 948778 NP_418664.2 CDS ridA NC_000913.3 4470527 4470913 R enamine/imine deaminase, reaction intermediate detoxification complement(4470527..4470913) Escherichia coli str. K-12 substr. MG1655 948771 NP_418665.1 CDS pyrI NC_000913.3 4470986 4471447 R aspartate carbamoyltransferase, regulatory subunit complement(4470986..4471447) Escherichia coli str. K-12 substr. MG1655 948763 NP_418666.1 CDS pyrB NC_000913.3 4471460 4472395 R aspartate carbamoyltransferase, catalytic subunit complement(4471460..4472395) Escherichia coli str. K-12 substr. MG1655 948767 NP_418667.1 CDS pyrL NC_000913.3 4472399 4472533 R pyrBI operon leader peptide complement(4472399..4472533) Escherichia coli str. K-12 substr. MG1655 948768 NP_418669.1 CDS yjgH NC_000913.3 4472814 4473209 R UPF0131 family protein complement(4472814..4473209) Escherichia coli str. K-12 substr. MG1655 948769 NP_418670.1 CDS bdcA NC_000913.3 4473340 4474053 R putative oxidoreductase; c-di-GMP-binding biofilm dispersal mediator protein complement(4473340..4474053) Escherichia coli str. K-12 substr. MG1655 948765 NP_418672.4 CDS bdcR NC_000913.3 4474124 4474717 D transcriptional repressor for divergent bdcA 4474124..4474717 Escherichia coli str. K-12 substr. MG1655 948775 NP_418673.4 CDS tabA NC_000913.3 4474862 4475314 D biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily 4474862..4475314 Escherichia coli str. K-12 substr. MG1655 948777 NP_418674.2 CDS yjgL NC_000913.3 4475437 4477251 D uncharacterized protein 4475437..4477251 Escherichia coli str. K-12 substr. MG1655 948776 NP_418675.1 CDS argI NC_000913.3 4477307 4478311 R ornithine carbamoyltransferase 1 complement(4477307..4478311) Escherichia coli str. K-12 substr. MG1655 948774 NP_418676.1 CDS rraB NC_000913.3 4478473 4478889 D protein inhibitor of RNase E 4478473..4478889 Escherichia coli str. K-12 substr. MG1655 948773 YP_026287.1 CDS yjgM NC_000913.3 4479034 4479537 R putative acyltransferase; putative acetyltransferase complement(4479034..4479537) Escherichia coli str. K-12 substr. MG1655 948772 YP_026288.1 CDS yjgN NC_000913.3 4479730 4480926 D DUF898 family inner membrane protein 4479730..4480926 Escherichia coli str. K-12 substr. MG1655 948784 NP_418679.1 CDS valS NC_000913.3 4480982 4483837 R valine tRNA synthetase; valyl-tRNA synthetase complement(4480982..4483837) Escherichia coli str. K-12 substr. MG1655 948785 NP_418680.1 CDS holC NC_000913.3 4483837 4484280 R DNA polymerase III, chi subunit complement(4483837..4484280) Escherichia coli str. K-12 substr. MG1655 948787 NP_418681.1 CDS pepA NC_000913.3 4484440 4485951 R aminopeptidase A/I; multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor complement(4484440..4485951) Escherichia coli str. K-12 substr. MG1655 948791 NP_418682.1 CDS lptF NC_000913.3 4486218 4487318 D lipopolysaccharide export ABC permease of the LptBFGC export complex 4486218..4487318 Escherichia coli str. K-12 substr. MG1655 948795 NP_418683.4 CDS lptG NC_000913.3 4487318 4488400 D lipopolysaccharide export ABC permease of the LptBFGC export complex 4487318..4488400 Escherichia coli str. K-12 substr. MG1655 945324 NP_418684.1 CDS yjgR NC_000913.3 4488561 4490063 R DUF853 family protein with NTPase fold complement(4488561..4490063) Escherichia coli str. K-12 substr. MG1655 948978 NP_418685.1 CDS idnR NC_000913.3 4490141 4491139 R transcriptional repressor, 5-gluconate-binding complement(4490141..4491139) Escherichia coli str. K-12 substr. MG1655 949058 NP_418686.1 CDS idnT NC_000913.3 4491206 4492525 R L-idonate and D-gluconate transporter complement(4491206..4492525) Escherichia coli str. K-12 substr. MG1655 948798 NP_418687.1 CDS idnO NC_000913.3 4492587 4493351 R 5-keto-D-gluconate-5-reductase complement(4492587..4493351) Escherichia coli str. K-12 substr. MG1655 947109 NP_418688.1 CDS idnD NC_000913.3 4493375 4494406 R L-idonate 5-dehydrogenase, NAD-binding complement(4493375..4494406) Escherichia coli str. K-12 substr. MG1655 944769 NP_418689.1 CDS idnK NC_000913.3 4494623 4495186 D D-gluconate kinase, thermosensitive 4494623..4495186 Escherichia coli str. K-12 substr. MG1655 946066 NP_418690.4 CDS ahr NC_000913.3 4495190 4496209 R putative oxidoreductase; aldehyde reductase, NADPH-dependent, Zn-containing, broad specificity complement(4495190..4496209) Escherichia coli str. K-12 substr. MG1655 948802 b4271 CDS intB NC_000913.3 4496675 4497940 D pseudogene, integrase homology;IS, phage, Tn; Phage-related functions and prophages; KpLE2 phage-like element; P4-like integrase; 4496675..4497940 Escherichia coli str. K-12 substr. MG1655 948782 NP_418692.2 CDS insC1 NC_000913.3 4498272 4498637 D IS2 repressor TnpA 4498272..4498637 Escherichia coli str. K-12 substr. MG1655 948781 NP_418693.1 CDS insD1 NC_000913.3 4498595 4499500 D IS2 transposase TnpB 4498595..4499500 Escherichia coli str. K-12 substr. MG1655 948779 b4575 CDS yjgX NC_000913.3 4499593 4500791 R pseudogene fragment; complement(join(4499593..4500534,4500534..4500791)) Escherichia coli str. K-12 substr. MG1655 4056033 NP_418697.1 CDS yjgZ NC_000913.3 4501260 4501589 D uncharacterized protein 4501260..4501589 Escherichia coli str. K-12 substr. MG1655 948804 NP_418698.1 CDS insG NC_000913.3 4502103 4503431 R IS4 transposase complement(4502103..4503431) Escherichia coli str. K-12 substr. MG1655 948805 NP_418699.4 CDS yjhB NC_000913.3 4504058 4505275 D putative transport protein; putative transporter 4504058..4505275 Escherichia coli str. K-12 substr. MG1655 948807 NP_418700.2 CDS yjhC NC_000913.3 4505287 4506405 D putative dehydrogenase; putative oxidoreductase 4505287..4506405 Escherichia coli str. K-12 substr. MG1655 948808 YP_001491548.1 CDS ythA NC_000913.3 4506448 4506573 D uncharacterized protein 4506448..4506573 Escherichia coli str. K-12 substr. MG1655 5625581 b4281 CDS yjhD NC_000913.3 4506626 4506856 R pseudogene, KpLE2 phage-like element; complement(4506626..4506856) Escherichia coli str. K-12 substr. MG1655 948809 b4282 CDS yjhE NC_000913.3 4506861 4507109 D pseudogene, KpLE2 phage-like element; 4506861..4507109 Escherichia coli str. K-12 substr. MG1655 948810 b4623 CDS insO NC_000913.3 4507197 4509793 D pseudogene, IS911 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; join(4507197..4507451,4509009..4509793) Escherichia coli str. K-12 substr. MG1655 5061531 NP_418704.1 CDS insI1 NC_000913.3 4507466 4508617 R IS30 transposase complement(4507466..4508617) Escherichia coli str. K-12 substr. MG1655 948815 b4561 CDS insM NC_000913.3 4508676 4508942 R pseudogene, IS600 transposase;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; complement(4508676..4508942) Escherichia coli str. K-12 substr. MG1655 1450310 b4286 CDS yjhV NC_000913.3 4509804 4510133 D pseudogene, KpLE2 phage-like element; 4509804..4510133 Escherichia coli str. K-12 substr. MG1655 948818 NP_418707.1 CDS fecE NC_000913.3 4510690 4511457 R ATP-binding component of citrate-dependent iron(III) transport protein; ATP-binding component of ABC superfamily; iron-dicitrate transporter subunit complement(4510690..4511457) Escherichia coli str. K-12 substr. MG1655 948819 NP_418708.1 CDS fecD NC_000913.3 4511458 4512414 R citrate-dependent iron transport, membrane-bound protein; membrane component of ABC superfamily; iron-dicitrate transporter subunit complement(4511458..4512414) Escherichia coli str. K-12 substr. MG1655 946816 NP_418709.1 CDS fecC NC_000913.3 4512411 4513409 R citrate-dependent iron(III) transport protein, cytosolic; membrane component of ABC superfamily; iron-dicitrate transporter subunit complement(4512411..4513409) Escherichia coli str. K-12 substr. MG1655 948826 NP_418710.4 CDS fecB NC_000913.3 4513406 4514308 R citrate-dependent iron transport, periplasmic protein; periplasmic-binding component of ABC superfamily; iron-dicitrate transporter subunit complement(4513406..4514308) Escherichia coli str. K-12 substr. MG1655 946838 NP_418711.1 CDS fecA NC_000913.3 4514353 4516677 R outer membrane receptor; citrate-dependent iron transport, outer membrane receptor; ferric citrate outer membrane transporter complement(4514353..4516677) Escherichia coli str. K-12 substr. MG1655 946427 NP_418712.1 CDS fecR NC_000913.3 4516764 4517717 R regulator for fec operon, periplasmic; FecI pro-sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator complement(4516764..4517717) Escherichia coli str. K-12 substr. MG1655 949104 NP_418713.1 CDS fecI NC_000913.3 4517714 4518235 R probable RNA polymerase sigma factor; RNA polymerase, sigma 19 factor complement(4517714..4518235) Escherichia coli str. K-12 substr. MG1655 946839 NP_418714.1 CDS insA NC_000913.3 4518527 4518802 D IS1 repressor TnpA 4518527..4518802 Escherichia coli str. K-12 substr. MG1655 948830 b4576 CDS insB1 NC_000913.3 4518721 4519224 D IS1 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; 4518721..4519224 Escherichia coli str. K-12 substr. MG1655 4056034 NP_418715.2 CDS yjhU NC_000913.3 4519338 4520324 R putative DNA-binding transcriptional regulator; KpLE2 phage-like element complement(4519338..4520324) Escherichia coli str. K-12 substr. MG1655 948827 NP_418716.1 CDS yjhF NC_000913.3 4520671 4522020 R putative transport system permease; putative transporter complement(4520671..4522020) Escherichia coli str. K-12 substr. MG1655 949102 NP_418717.1 CDS yjhG NC_000913.3 4522127 4524094 R putative dehydratase complement(4522127..4524094) Escherichia coli str. K-12 substr. MG1655 946829 NP_418718.4 CDS yjhH NC_000913.3 4524105 4525010 R putative lyase/synthase complement(4524105..4525010) Escherichia coli str. K-12 substr. MG1655 948825 NP_418719.1 CDS yjhI NC_000913.3 4525015 4525803 R putative regulator; putative DNA-binding transcriptional regulator complement(4525015..4525803) Escherichia coli str. K-12 substr. MG1655 949100 NP_418720.1 CDS sgcR NC_000913.3 4526106 4526888 R putative DEOR-type transcriptional regulator; putative DNA-binding transcriptional regulator complement(4526106..4526888) Escherichia coli str. K-12 substr. MG1655 946830 NP_418721.1 CDS sgcE NC_000913.3 4526905 4527537 R putative epimerase complement(4526905..4527537) Escherichia coli str. K-12 substr. MG1655 948829 NP_418722.1 CDS sgcA NC_000913.3 4527549 4527980 R putative PTS system enzyme II A component; putative phosphotransferase enzyme IIA component complement(4527549..4527980) Escherichia coli str. K-12 substr. MG1655 948831 NP_418723.1 CDS sgcQ NC_000913.3 4528111 4528917 R putative nucleoside triphosphatase complement(4528111..4528917) Escherichia coli str. K-12 substr. MG1655 948834 NP_418724.1 CDS sgcC NC_000913.3 4528930 4530243 R putative PTS system enzyme IIC component; putative PTS system EIIC permease component complement(4528930..4530243) Escherichia coli str. K-12 substr. MG1655 946849 YP_588476.1 CDS sgcB NC_000913.3 4530255 4530533 R putative enzyme IIB component of PTS complement(4530255..4530533) Escherichia coli str. K-12 substr. MG1655 1450295 NP_418725.4 CDS sgcX NC_000913.3 4530530 4531651 R putative lyase/synthase; putative endoglucanase with Zn-dependent exopeptidase domain complement(4530530..4531651) Escherichia coli str. K-12 substr. MG1655 948840 b4656 CDS yjhY NC_000913.3 4532050 4532310 R pseudogene, zinc finger protein family; complement(4532050..4532310) Escherichia coli str. K-12 substr. MG1655 5625582 NP_418726.1 CDS yjhP NC_000913.3 4532437 4533183 R putative methyltransferase complement(4532437..4533183) Escherichia coli str. K-12 substr. MG1655 946851 NP_418727.1 CDS yjhQ NC_000913.3 4533239 4533784 R putative acetyltransferase complement(4533239..4533784) Escherichia coli str. K-12 substr. MG1655 949059 YP_588477.1 CDS yjhX NC_000913.3 4533796 4534053 R UPF0386 family protein complement(4533796..4534053) Escherichia coli str. K-12 substr. MG1655 1450297 b4657 CDS yjhZ NC_000913.3 4534430 4534675 R pseudogene, rimK paralog, C-terminal fragment; complement(4534430..4534675) Escherichia coli str. K-12 substr. MG1655 5625583 b4308 CDS yjhR NC_000913.3 4534791 4536031 D pseudogene, helicase family; putative frameshift suppressor; join(4534791..4535003,4535003..4536031) Escherichia coli str. K-12 substr. MG1655 944740 NP_418729.1 CDS nanS NC_000913.3 4536614 4537594 R 9-O-acetyl N-acetylneuraminic acid esterase complement(4536614..4537594) Escherichia coli str. K-12 substr. MG1655 948835 NP_418730.4 CDS nanM NC_000913.3 4537659 4538765 R N-acetylneuraminic acid mutarotase complement(4537659..4538765) Escherichia coli str. K-12 substr. MG1655 949106 NP_418731.2 CDS nanC NC_000913.3 4538785 4539501 R N-acetylnuraminic acid outer membrane channel protein complement(4538785..4539501) Escherichia coli str. K-12 substr. MG1655 946843 NP_418732.1 CDS fimB NC_000913.3 4540957 4541559 D recombinase involved in phase variation; regulator for fimA; tyrosine recombinase/inversion of on/off regulator of fimA 4540957..4541559 Escherichia coli str. K-12 substr. MG1655 948832 NP_418733.1 CDS fimE NC_000913.3 4542037 4542633 D recombinase involved in phase variation; regulator for fimA; tyrosine recombinase/inversion of on/off regulator of fimA 4542037..4542633 Escherichia coli str. K-12 substr. MG1655 948836 NP_418734.1 CDS fimA NC_000913.3 4543115 4543663 D major type 1 subunit fimbrin (pilin) 4543115..4543663 Escherichia coli str. K-12 substr. MG1655 948838 NP_418735.2 CDS fimI NC_000913.3 4543728 4544267 D fimbrial protein; fimbrial protein involved in type 1 pilus biosynthesis 4543728..4544267 Escherichia coli str. K-12 substr. MG1655 948841 NP_418736.3 CDS fimC NC_000913.3 4544304 4545029 D periplasmic chaperone, required for type 1 fimbriae; periplasmic chaperone 4544304..4545029 Escherichia coli str. K-12 substr. MG1655 948843 NP_418737.1 CDS fimD NC_000913.3 4545096 4547732 D outer membrane protein; export and assembly of type 1 fimbriae, interrupted; fimbrial usher outer membrane porin protein; FimCD chaperone-usher 4545096..4547732 Escherichia coli str. K-12 substr. MG1655 948844 NP_418738.1 CDS fimF NC_000913.3 4547742 4548272 D fimbrial morphology; minor component of type 1 fimbriae 4547742..4548272 Escherichia coli str. K-12 substr. MG1655 948845 NP_418739.1 CDS fimG NC_000913.3 4548285 4548788 D fimbrial morphology; minor component of type 1 fimbriae 4548285..4548788 Escherichia coli str. K-12 substr. MG1655 948846 NP_418740.1 CDS fimH NC_000913.3 4548808 4549710 D minor fimbrial subunit, D-mannose specific adhesin; minor component of type 1 fimbriae 4548808..4549710 Escherichia coli str. K-12 substr. MG1655 948847 NP_418741.1 CDS gntP NC_000913.3 4549953 4551296 R gluconate transport system permease 3; fructuronate transporter complement(4549953..4551296) Escherichia coli str. K-12 substr. MG1655 948848 NP_418742.1 CDS uxuA NC_000913.3 4551636 4552820 D mannonate hydrolase 4551636..4552820 Escherichia coli str. K-12 substr. MG1655 947082 NP_418743.1 CDS uxuB NC_000913.3 4552901 4554361 D D-mannonate oxidoreductase; D-mannonate oxidoreductase, NAD-dependent 4552901..4554361 Escherichia coli str. K-12 substr. MG1655 946795 NP_418744.1 CDS uxuR NC_000913.3 4554576 4555349 D regulator for uxu operon; fructuronate-inducible hexuronate regulon transcriptional repressor; autorepressor 4554576..4555349 Escherichia coli str. K-12 substr. MG1655 948849 NP_418745.3 CDS yjiC NC_000913.3 4555490 4556320 R uncharacterized protein complement(4555490..4556320) Escherichia coli str. K-12 substr. MG1655 948850 NP_418746.4 CDS iraD NC_000913.3 4556993 4557385 D RpoS stabilzer after DNA damage, anti-RssB factor 4556993..4557385 Escherichia coli str. K-12 substr. MG1655 948851 NP_418747.1 CDS hypT NC_000913.3 4557378 4558289 R putative transcriptional regulator LYSR-type; hypochlorite-responsive transcription factor complement(4557378..4558289) Escherichia coli str. K-12 substr. MG1655 948852 NP_418748.1 CDS iadA NC_000913.3 4558354 4559526 R isoaspartyl dipeptidase complement(4558354..4559526) Escherichia coli str. K-12 substr. MG1655 948853 NP_418749.1 CDS yjiG NC_000913.3 4559539 4560000 R SpmB family inner membrane protein complement(4559539..4560000) Escherichia coli str. K-12 substr. MG1655 948854 NP_418750.2 CDS yjiH NC_000913.3 4559997 4560680 R nucleoside recognition pore and gate family putative inner membrane transporter complement(4559997..4560680) Escherichia coli str. K-12 substr. MG1655 948856 NP_418751.4 CDS kptA NC_000913.3 4560930 4561484 D RNA 2'-phosphotransferase 4560930..4561484 Escherichia coli str. K-12 substr. MG1655 948858 NP_418752.1 CDS yjiJ NC_000913.3 4561497 4562675 R putative transport protein; DUF1228 family putative inner membrane MFS superfamily transporter complement(4561497..4562675) Escherichia coli str. K-12 substr. MG1655 948859 NP_418753.3 CDS yjiK NC_000913.3 4562743 4563603 R SdiA-regulated family putative membrane-anchored protein; putative phytase-like esterase complement(4562743..4563603) Escherichia coli str. K-12 substr. MG1655 948957 NP_418754.2 CDS yjiL NC_000913.3 4563922 4564689 R putative enzyme; putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase complement(4563922..4564689) Escherichia coli str. K-12 substr. MG1655 948837 NP_418755.4 CDS yjiM NC_000913.3 4564699 4565850 R putative 2-hydroxyglutaryl-CoA dehydratase complement(4564699..4565850) Escherichia coli str. K-12 substr. MG1655 945789 NP_418756.1 CDS yjiN NC_000913.3 4565966 4567246 R zinc-type alcohol dehydrogenase-like protein complement(4565966..4567246) Escherichia coli str. K-12 substr. MG1655 948860 NP_418757.1 CDS mdtM NC_000913.3 4567287 4568519 R putative transport protein; multidrug efflux system protein complement(4567287..4568519) Escherichia coli str. K-12 substr. MG1655 948861 b4339 CDS yjiP NC_000913.3 4568998 4569918 D pseudogene, transposase_31 family protein; 4568998..4569918 Escherichia coli str. K-12 substr. MG1655 948866 NP_418760.1 CDS yjiR NC_000913.3 4570162 4571574 R putative regulator; putative DNA-binding transcriptional regulator/putative aminotransferase complement(4570162..4571574) Escherichia coli str. K-12 substr. MG1655 949089 NP_418761.1 CDS yjiS NC_000913.3 4571751 4571915 D DUF1127 family protein 4571751..4571915 Escherichia coli str. K-12 substr. MG1655 948903 b4342 CDS yjiT NC_000913.3 4572414 4573916 D pseudogene; 4572414..4573916 Escherichia coli str. K-12 substr. MG1655 945056 b4486 CDS yjiV NC_000913.3 4573919 4576855 D pseudogene; conserved hypothetical protein; 4573919..4576855 Escherichia coli str. K-12 substr. MG1655 2847669 NP_418765.1 CDS mcrC NC_000913.3 4576912 4577958 R component of McrBC 5-methylcytosine restriction system, expands range of sequences restricted; 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC complement(4576912..4577958) Escherichia coli str. K-12 substr. MG1655 948880 NP_418766.4 CDS mcrB NC_000913.3 4577958 4579337 R component of McrBC 5-methylcytosine restriction system; 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB complement(4577958..4579337) Escherichia coli str. K-12 substr. MG1655 949122 NP_418767.4 CDS symE NC_000913.3 4579499 4579840 R toxic peptide regulated by antisense sRNA symR complement(4579499..4579840) Escherichia coli str. K-12 substr. MG1655 949088 NP_418768.1 CDS hsdS NC_000913.3 4580068 4581462 R specificity determinant for hsdM and hsdR complement(4580068..4581462) Escherichia coli str. K-12 substr. MG1655 948867 NP_418769.1 CDS hsdM NC_000913.3 4581459 4583048 R host modification; DNA methylase M; DNA methyltransferase M complement(4581459..4583048) Escherichia coli str. K-12 substr. MG1655 948872 NP_418770.2 CDS hsdR NC_000913.3 4583249 4586761 R host restriction; endonuclease R; endonuclease R Type I restriction enzyme complement(4583249..4586761) Escherichia coli str. K-12 substr. MG1655 948878 NP_418771.1 CDS mrr NC_000913.3 4586949 4587863 D restriction of methylated adenine; methylated adenine and cytosine restriction protein 4586949..4587863 Escherichia coli str. K-12 substr. MG1655 948898 NP_418772.4 CDS yjiA NC_000913.3 4587909 4588865 R GTP-binding protein, putative GTPase complement(4587909..4588865) Escherichia coli str. K-12 substr. MG1655 948882 NP_418773.1 CDS yjiX NC_000913.3 4588876 4589079 R DUF466 family protein complement(4588876..4589079) Escherichia coli str. K-12 substr. MG1655 949090 NP_418774.2 CDS yjiY NC_000913.3 4589129 4591279 R putative carbon starvation protein; putative transporter complement(4589129..4591279) Escherichia coli str. K-12 substr. MG1655 948914 NP_418775.1 CDS tsr NC_000913.3 4591657 4593312 D methyl-accepting chemotaxis protein I, serine sensor receptor 4591657..4593312 Escherichia coli str. K-12 substr. MG1655 948884 NP_418776.1 CDS yjjL NC_000913.3 4593361 4594722 R putative transport protein, cryptic, orf, joins former yjiZ and yjjL; L-galactonate transporter complement(4593361..4594722) Escherichia coli str. K-12 substr. MG1655 948879 YP_026290.1 CDS yjjM NC_000913.3 4594937 4595851 R yjjMN operon transcriptional activator complement(4594937..4595851) Escherichia coli str. K-12 substr. MG1655 948881 NP_418778.4 CDS yjjN NC_000913.3 4595990 4597012 D putative oxidoreductase; L-galactonate oxidoreductase 4595990..4597012 Escherichia coli str. K-12 substr. MG1655 948883 NP_418779.2 CDS opgB NC_000913.3 4597150 4599441 R phosphoglycerol transferases I and II complement(4597150..4599441) Escherichia coli str. K-12 substr. MG1655 948888 NP_418780.2 CDS yjjA NC_000913.3 4599695 4600189 R putative glycoprotein/receptor; putative DUF2501 family periplasmic protein complement(4599695..4600189) Escherichia coli str. K-12 substr. MG1655 948887 NP_418781.1 CDS dnaC NC_000913.3 4600238 4600975 R chromosome replication; initiation and chain elongation; DNA biosynthesis protein complement(4600238..4600975) Escherichia coli str. K-12 substr. MG1655 948864 NP_418782.1 CDS dnaT NC_000913.3 4600978 4601517 R DNA biosynthesis; primosomal protein i; DNA biosynthesis protein (primosomal protein I) complement(4600978..4601517) Escherichia coli str. K-12 substr. MG1655 948813 NP_418783.2 CDS yjjB NC_000913.3 4601624 4602097 R DUF3815 family inner membrane protein complement(4601624..4602097) Escherichia coli str. K-12 substr. MG1655 948811 NP_418784.4 CDS yjjP NC_000913.3 4602088 4602858 R putative structural protein; DUF1212 family inner membrane protein complement(4602088..4602858) Escherichia coli str. K-12 substr. MG1655 948812 NP_418785.1 CDS yjjQ NC_000913.3 4603477 4604202 D putative regulator; putative transcriptional regulator 4603477..4604202 Escherichia coli str. K-12 substr. MG1655 948896 NP_418786.4 CDS bglJ NC_000913.3 4604160 4604837 D 2-component transcriptional regulator; bgl operon transcriptional activator 4604160..4604837 Escherichia coli str. K-12 substr. MG1655 948889 NP_418787.1 CDS fhuF NC_000913.3 4604875 4605663 R ferric iron reductase involved in ferric hydroximate transport complement(4604875..4605663) Escherichia coli str. K-12 substr. MG1655 948891 YP_588478.1 CDS yjjZ NC_000913.3 4605804 4606040 D uncharacterized protein 4605804..4606040 Escherichia coli str. K-12 substr. MG1655 1450313 NP_418788.1 CDS rsmC NC_000913.3 4606669 4607700 R 16S rRNA m(2)G1207 methyltransferase, SAM-dependent complement(4606669..4607700) Escherichia coli str. K-12 substr. MG1655 948892 NP_418789.1 CDS holD NC_000913.3 4607803 4608216 D DNA polymerase III, psi subunit 4607803..4608216 Escherichia coli str. K-12 substr. MG1655 948890 NP_418790.1 CDS rimI NC_000913.3 4608185 4608631 D acyltransferase for 30S ribosomal subunit protein S18; acetylation of N-terminal alanine; ribosomal-protein-S18-alanine N-acetyltransferase 4608185..4608631 Escherichia coli str. K-12 substr. MG1655 948894 NP_418791.1 CDS yjjG NC_000913.3 4608646 4609323 D putative phosphatase; dUMP phosphatase 4608646..4609323 Escherichia coli str. K-12 substr. MG1655 948899 NP_418792.1 CDS prfC NC_000913.3 4609414 4611003 D peptide chain release factor RF-3 4609414..4611003 Escherichia coli str. K-12 substr. MG1655 948897 NP_418793.1 CDS osmY NC_000913.3 4611396 4612001 D hyperosmotically inducible periplasmic protein; periplasmic protein 4611396..4612001 Escherichia coli str. K-12 substr. MG1655 948895 YP_588479.2 CDS ytjA NC_000913.3 4612128 4612289 D uncharacterized protein 4612128..4612289 Escherichia coli str. K-12 substr. MG1655 1450298 NP_418794.1 CDS yjjU NC_000913.3 4612411 4613484 D putative patatin-like family phospholipase 4612411..4613484 Escherichia coli str. K-12 substr. MG1655 948906 YP_026291.2 CDS yjjV NC_000913.3 4613481 4614260 D putative DNase 4613481..4614260 Escherichia coli str. K-12 substr. MG1655 2847741 NP_418796.1 CDS yjjW NC_000913.3 4614680 4615543 R putative activating enzyme; putative pyruvate formate lyase activating enzyme complement(4614680..4615543) Escherichia coli str. K-12 substr. MG1655 948905 NP_418797.1 CDS yjjI NC_000913.3 4615515 4617065 R DUF3029 family protein, putative glycine radical enzyme complement(4615515..4617065) Escherichia coli str. K-12 substr. MG1655 948904 NP_418798.1 CDS deoC NC_000913.3 4617323 4618102 D 2-deoxyribose-5-phosphate aldolase; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked 4617323..4618102 Escherichia coli str. K-12 substr. MG1655 948902 NP_418799.1 CDS deoA NC_000913.3 4618229 4619551 D thymidine phosphorylase 4618229..4619551 Escherichia coli str. K-12 substr. MG1655 948901 NP_418800.1 CDS deoB NC_000913.3 4619603 4620826 D phosphopentomutase 4619603..4620826 Escherichia coli str. K-12 substr. MG1655 948910 NP_418801.1 CDS deoD NC_000913.3 4620883 4621602 D purine-nucleoside phosphorylase 4620883..4621602 Escherichia coli str. K-12 substr. MG1655 945654 NP_418802.1 CDS yjjJ NC_000913.3 4621769 4623100 D putative protein kinase 4621769..4623100 Escherichia coli str. K-12 substr. MG1655 944883 NP_418803.1 CDS lplA NC_000913.3 4623101 4624117 R lipoate-protein ligase A complement(4623101..4624117) Escherichia coli str. K-12 substr. MG1655 944865 NP_418804.1 CDS ytjB NC_000913.3 4624145 4624789 R SMP_2 family putative membrane-anchored periplasmic protein complement(4624145..4624789) Escherichia coli str. K-12 substr. MG1655 946089 NP_418805.1 CDS serB NC_000913.3 4624895 4625863 D 3-phosphoserine phosphatase 4624895..4625863 Escherichia coli str. K-12 substr. MG1655 948913 NP_418806.1 CDS radA NC_000913.3 4625912 4627294 D probable ATP-dependent protease; DNA repair protein 4625912..4627294 Escherichia coli str. K-12 substr. MG1655 948912 NP_418807.4 CDS nadR NC_000913.3 4627315 4628547 D probable nadAB transcriptional regulator; trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor 4627315..4628547 Escherichia coli str. K-12 substr. MG1655 948911 NP_418808.1 CDS yjjK NC_000913.3 4628855 4630522 R putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component complement(4628855..4630522) Escherichia coli str. K-12 substr. MG1655 948909 NP_418809.4 CDS slt NC_000913.3 4630733 4632670 D soluble lytic murein transglycosylase; lytic murein transglycosylase, soluble 4630733..4632670 Escherichia coli str. K-12 substr. MG1655 948908 NP_418810.1 CDS trpR NC_000913.3 4632760 4633086 D regulator for trp operon and aroH; trp aporepressor; transcriptional repressor, tryptophan-binding 4632760..4633086 Escherichia coli str. K-12 substr. MG1655 948917 NP_418811.2 CDS yjjX NC_000913.3 4633233 4633745 R non-canonical purine NTP phosphatase, ITPase/XTPase complement(4633233..4633745) Escherichia coli str. K-12 substr. MG1655 948919 NP_418812.1 CDS ytjC NC_000913.3 4633797 4634444 D phosphoglyceromutase 2; phosphatase 4633797..4634444 Escherichia coli str. K-12 substr. MG1655 948918 NP_418813.1 CDS rob NC_000913.3 4634441 4635310 R right origin-binding protein; right oriC-binding transcriptional activator, AraC family complement(4634441..4635310) Escherichia coli str. K-12 substr. MG1655 948916 NP_418814.1 CDS creA NC_000913.3 4635521 4635994 D putative periplasmic protein 4635521..4635994 Escherichia coli str. K-12 substr. MG1655 948920 NP_418815.1 CDS creB NC_000913.3 4636007 4636696 D catabolic regulation response regulator; response regulator in two-component regulatory system with CreC 4636007..4636696 Escherichia coli str. K-12 substr. MG1655 948922 NP_418816.1 CDS creC NC_000913.3 4636696 4638120 D catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon; sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon 4636696..4638120 Escherichia coli str. K-12 substr. MG1655 948609 NP_418817.1 CDS creD NC_000913.3 4638178 4639530 D tolerance to colicin E2; inner membrane protein 4638178..4639530 Escherichia coli str. K-12 substr. MG1655 948868 NP_418818.1 CDS arcA NC_000913.3 4639590 4640306 R negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA); response regulator in two-component regulatory system with ArcB or CpxA complement(4639590..4640306) Escherichia coli str. K-12 substr. MG1655 948874 NP_418819.1 CDS yjjY NC_000913.3 4640402 4640542 D uncharacterized protein 4640402..4640542 Escherichia coli str. K-12 substr. MG1655 948925 NP_418820.1 CDS yjtD NC_000913.3 4640942 4641628 D putative methyltransferase 4640942..4641628 Escherichia coli str. K-12 substr. MG1655 948924 b0202 tRNA ileV NC_000913.3 225381 225457 D tRNA-Ile 225381..225457 Escherichia coli str. K-12 substr. MG1655 944884 b0203 tRNA alaV NC_000913.3 225500 225575 D tRNA-Ala 225500..225575 Escherichia coli str. K-12 substr. MG1655 944890 b0206 tRNA aspU NC_000913.3 228928 229004 D tRNA-Asp 228928..229004 Escherichia coli str. K-12 substr. MG1655 944880 b0216 tRNA aspV NC_000913.3 236931 237007 D tRNA-Asp 236931..237007 Escherichia coli str. K-12 substr. MG1655 947541 b0244 tRNA thrW NC_000913.3 262871 262946 D tRNA-Thr 262871..262946 Escherichia coli str. K-12 substr. MG1655 947202 b4629 tRNA ptwF NC_000913.3 297206 297254 D tRNA-OTHER 297206..297254 Escherichia coli str. K-12 substr. MG1655 5625555 b0536 tRNA argU NC_000913.3 564723 564799 D tRNA-Arg 564723..564799 Escherichia coli str. K-12 substr. MG1655 945161 b4635 tRNA pauD NC_000913.3 586057 586101 D tRNA-OTHER 586057..586101 Escherichia coli str. K-12 substr. MG1655 5625561 b0664 tRNA glnX NC_000913.3 696430 696504 R tRNA-Gln complement(696430..696504) Escherichia coli str. K-12 substr. MG1655 945257 b0665 tRNA glnV NC_000913.3 696542 696616 R tRNA-Gln complement(696542..696616) Escherichia coli str. K-12 substr. MG1655 945255 b0666 tRNA metU NC_000913.3 696664 696740 R tRNA-Met complement(696664..696740) Escherichia coli str. K-12 substr. MG1655 945262 b0668 tRNA glnW NC_000913.3 696756 696830 R tRNA-Gln complement(696756..696830) Escherichia coli str. K-12 substr. MG1655 945750 b0670 tRNA glnU NC_000913.3 696865 696939 R tRNA-Gln complement(696865..696939) Escherichia coli str. K-12 substr. MG1655 945269 b0672 tRNA leuW NC_000913.3 696963 697047 R tRNA-Leu complement(696963..697047) Escherichia coli str. K-12 substr. MG1655 945264 b0673 tRNA metT NC_000913.3 697057 697133 R tRNA-Met complement(697057..697133) Escherichia coli str. K-12 substr. MG1655 945280 b0743 tRNA lysT NC_000913.3 780554 780629 D tRNA-Lys 780554..780629 Escherichia coli str. K-12 substr. MG1655 945336 b0744 tRNA valT NC_000913.3 780765 780840 D tRNA-Val 780765..780840 Escherichia coli str. K-12 substr. MG1655 945331 b0745 tRNA lysW NC_000913.3 780843 780918 D tRNA-Lys 780843..780918 Escherichia coli str. K-12 substr. MG1655 945338 b0746 tRNA valZ NC_000913.3 781068 781143 D tRNA-Val 781068..781143 Escherichia coli str. K-12 substr. MG1655 945345 b0747 tRNA lysY NC_000913.3 781147 781222 D tRNA-Lys 781147..781222 Escherichia coli str. K-12 substr. MG1655 945342 b0748 tRNA lysZ NC_000913.3 781369 781444 D tRNA-Lys 781369..781444 Escherichia coli str. K-12 substr. MG1655 945352 b0749 tRNA lysQ NC_000913.3 781577 781652 D tRNA-Lys 781577..781652 Escherichia coli str. K-12 substr. MG1655 945353 b0883 tRNA serW NC_000913.3 925884 925971 R tRNA-Ser complement(925884..925971) Escherichia coli str. K-12 substr. MG1655 945501 b0971 tRNA serT NC_000913.3 1031625 1031712 R tRNA-Ser complement(1031625..1031712) Escherichia coli str. K-12 substr. MG1655 944826 b1032 tRNA serX NC_000913.3 1097565 1097652 R tRNA-Ser complement(1097565..1097652) Escherichia coli str. K-12 substr. MG1655 945714 b1230 tRNA tyrV NC_000913.3 1287244 1287328 R tRNA-Tyr complement(1287244..1287328) Escherichia coli str. K-12 substr. MG1655 945811 b1231 tRNA tyrT NC_000913.3 1287538 1287622 R tRNA-Tyr complement(1287538..1287622) Escherichia coli str. K-12 substr. MG1655 945820 b1665 tRNA valV NC_000913.3 1746435 1746511 D tRNA-Val 1746435..1746511 Escherichia coli str. K-12 substr. MG1655 946170 b1666 tRNA valW NC_000913.3 1746516 1746592 D tRNA-Val 1746516..1746592 Escherichia coli str. K-12 substr. MG1655 949069 b1909 tRNA leuZ NC_000913.3 1991815 1991901 R tRNA-Leu complement(1991815..1991901) Escherichia coli str. K-12 substr. MG1655 945662 b1910 tRNA cysT NC_000913.3 1991914 1991987 R tRNA-Cys complement(1991914..1991987) Escherichia coli str. K-12 substr. MG1655 946414 b1911 tRNA glyW NC_000913.3 1992042 1992117 R tRNA-Gly complement(1992042..1992117) Escherichia coli str. K-12 substr. MG1655 946416 b1975 tRNA serU NC_000913.3 2043468 2043557 R tRNA-Ser complement(2043468..2043557) Escherichia coli str. K-12 substr. MG1655 946492 b1977 tRNA asnT NC_000913.3 2044549 2044624 D tRNA-Asn 2044549..2044624 Escherichia coli str. K-12 substr. MG1655 946488 b1984 tRNA asnW NC_000913.3 2058027 2058102 R tRNA-Asn complement(2058027..2058102) Escherichia coli str. K-12 substr. MG1655 946494 b1986 tRNA asnU NC_000913.3 2059851 2059926 D tRNA-Asn 2059851..2059926 Escherichia coli str. K-12 substr. MG1655 946503 b1989 tRNA asnV NC_000913.3 2062260 2062335 D tRNA-Asn 2062260..2062335 Escherichia coli str. K-12 substr. MG1655 946509 b2189 tRNA proL NC_000913.3 2286211 2286287 D tRNA-Pro 2286211..2286287 Escherichia coli str. K-12 substr. MG1655 946320 b2348 tRNA argW NC_000913.3 2466309 2466383 D tRNA-Arg 2466309..2466383 Escherichia coli str. K-12 substr. MG1655 945486 b4643 tRNA pawZ NC_000913.3 2476584 2476598 D tRNA-OTHER 2476584..2476598 Escherichia coli str. K-12 substr. MG1655 5625569 b2396 tRNA alaX NC_000913.3 2518041 2518116 R tRNA-Ala complement(2518041..2518116) Escherichia coli str. K-12 substr. MG1655 946859 b2397 tRNA alaW NC_000913.3 2518156 2518231 R tRNA-Ala complement(2518156..2518231) Escherichia coli str. K-12 substr. MG1655 946860 b2401 tRNA valU NC_000913.3 2520931 2521006 D tRNA-Val 2520931..2521006 Escherichia coli str. K-12 substr. MG1655 946824 b2402 tRNA valX NC_000913.3 2521051 2521126 D tRNA-Val 2521051..2521126 Escherichia coli str. K-12 substr. MG1655 946817 b2403 tRNA valY NC_000913.3 2521173 2521248 D tRNA-Val 2521173..2521248 Escherichia coli str. K-12 substr. MG1655 946870 b2404 tRNA lysV NC_000913.3 2521253 2521328 D tRNA-Lys 2521253..2521328 Escherichia coli str. K-12 substr. MG1655 946866 b2590 tRNA gltW NC_000913.3 2729369 2729444 R tRNA-Glu complement(2729369..2729444) Escherichia coli str. K-12 substr. MG1655 947076 b2652 tRNA ileY NC_000913.3 2785762 2785837 R tRNA-Ile complement(2785762..2785837) Escherichia coli str. K-12 substr. MG1655 947163 b2691 tRNA argQ NC_000913.3 2817784 2817860 R tRNA-Arg complement(2817784..2817860) Escherichia coli str. K-12 substr. MG1655 947150 b2692 tRNA argZ NC_000913.3 2818059 2818135 R tRNA-Arg complement(2818059..2818135) Escherichia coli str. K-12 substr. MG1655 947171 b2693 tRNA argY NC_000913.3 2818198 2818274 R tRNA-Arg complement(2818198..2818274) Escherichia coli str. K-12 substr. MG1655 946596 b2694 tRNA argV NC_000913.3 2818473 2818549 R tRNA-Arg complement(2818473..2818549) Escherichia coli str. K-12 substr. MG1655 947209 b2695 tRNA serV NC_000913.3 2818553 2818645 R tRNA-Ser complement(2818553..2818645) Escherichia coli str. K-12 substr. MG1655 947173 b2814 tRNA metZ NC_000913.3 2947387 2947463 D tRNA-Met 2947387..2947463 Escherichia coli str. K-12 substr. MG1655 947198 b2815 tRNA metW NC_000913.3 2947497 2947573 D tRNA-Met 2947497..2947573 Escherichia coli str. K-12 substr. MG1655 947292 b2816 tRNA metV NC_000913.3 2947607 2947683 D tRNA-Met 2947607..2947683 Escherichia coli str. K-12 substr. MG1655 946037 b2864 tRNA glyU NC_000913.3 2998984 2999057 R tRNA-Gly complement(2998984..2999057) Escherichia coli str. K-12 substr. MG1655 947343 b2967 tRNA pheV NC_000913.3 3110366 3110441 D tRNA-Phe 3110366..3110441 Escherichia coli str. K-12 substr. MG1655 947463 b3069 tRNA ileX NC_000913.3 3215598 3215673 D tRNA-Ile 3215598..3215673 Escherichia coli str. K-12 substr. MG1655 947558 b3171 tRNA metY NC_000913.3 3318213 3318289 R tRNA-Met complement(3318213..3318289) Escherichia coli str. K-12 substr. MG1655 947678 b3174 tRNA leuU NC_000913.3 3322072 3322158 R tRNA-Leu complement(3322072..3322158) Escherichia coli str. K-12 substr. MG1655 947505 b3273 tRNA thrV NC_000913.3 3423580 3423655 R tRNA-Thr complement(3423580..3423655) Escherichia coli str. K-12 substr. MG1655 947770 b3276 tRNA alaU NC_000913.3 3426958 3427033 R tRNA-Ala complement(3426958..3427033) Escherichia coli str. K-12 substr. MG1655 947772 b3277 tRNA ileU NC_000913.3 3427076 3427152 R tRNA-Ile complement(3427076..3427152) Escherichia coli str. K-12 substr. MG1655 947778 b3545 tRNA proK NC_000913.3 3708616 3708692 R tRNA-Pro complement(3708616..3708692) Escherichia coli str. K-12 substr. MG1655 948061 b3658 tRNA selC NC_000913.3 3836222 3836316 D tRNA-Sec 3836222..3836316 Escherichia coli str. K-12 substr. MG1655 948167 b3757 tRNA gltU NC_000913.3 3943435 3943510 D tRNA-Glu 3943435..3943510 Escherichia coli str. K-12 substr. MG1655 948271 b3760 tRNA aspT NC_000913.3 3946872 3946948 D tRNA-Asp 3946872..3946948 Escherichia coli str. K-12 substr. MG1655 948276 b3761 tRNA trpT NC_000913.3 3946957 3947032 D tRNA-Trp 3946957..3947032 Escherichia coli str. K-12 substr. MG1655 948275 b3796 tRNA argX NC_000913.3 3982375 3982451 D tRNA-Arg 3982375..3982451 Escherichia coli str. K-12 substr. MG1655 945107 b3797 tRNA hisR NC_000913.3 3982509 3982585 D tRNA-His 3982509..3982585 Escherichia coli str. K-12 substr. MG1655 948305 b3798 tRNA leuT NC_000913.3 3982606 3982692 D tRNA-Leu 3982606..3982692 Escherichia coli str. K-12 substr. MG1655 948304 b3799 tRNA proM NC_000913.3 3982735 3982811 D tRNA-Pro 3982735..3982811 Escherichia coli str. K-12 substr. MG1655 948303 b3852 tRNA ileT NC_000913.3 4037141 4037217 D tRNA-Ile 4037141..4037217 Escherichia coli str. K-12 substr. MG1655 948339 b3853 tRNA alaT NC_000913.3 4037260 4037335 D tRNA-Ala 4037260..4037335 Escherichia coli str. K-12 substr. MG1655 948337 b3969 tRNA gltT NC_000913.3 4168372 4168447 D tRNA-Glu 4168372..4168447 Escherichia coli str. K-12 substr. MG1655 948465 b3976 tRNA thrU NC_000913.3 4175388 4175463 D tRNA-Thr 4175388..4175463 Escherichia coli str. K-12 substr. MG1655 948476 b3977 tRNA tyrU NC_000913.3 4175472 4175556 D tRNA-Tyr 4175472..4175556 Escherichia coli str. K-12 substr. MG1655 948474 b3978 tRNA glyT NC_000913.3 4175673 4175747 D tRNA-Gly 4175673..4175747 Escherichia coli str. K-12 substr. MG1655 948481 b3979 tRNA thrT NC_000913.3 4175754 4175829 D tRNA-Thr 4175754..4175829 Escherichia coli str. K-12 substr. MG1655 948480 b4008 tRNA gltV NC_000913.3 4209774 4209849 D tRNA-Glu 4209774..4209849 Escherichia coli str. K-12 substr. MG1655 948510 b4134 tRNA pheU NC_000913.3 4362551 4362626 R tRNA-Phe complement(4362551..4362626) Escherichia coli str. K-12 substr. MG1655 948651 b4163 tRNA glyV NC_000913.3 4392360 4392435 D tRNA-Gly 4392360..4392435 Escherichia coli str. K-12 substr. MG1655 948682 b4164 tRNA glyX NC_000913.3 4392472 4392547 D tRNA-Gly 4392472..4392547 Escherichia coli str. K-12 substr. MG1655 948681 b4165 tRNA glyY NC_000913.3 4392583 4392658 D tRNA-Gly 4392583..4392658 Escherichia coli str. K-12 substr. MG1655 948687 b4270 tRNA leuX NC_000913.3 4496405 4496489 D tRNA-Leu 4496405..4496489 Escherichia coli str. K-12 substr. MG1655 948803 b4368 tRNA leuV NC_000913.3 4606079 4606165 R tRNA-Leu complement(4606079..4606165) Escherichia coli str. K-12 substr. MG1655 948873 b4369 tRNA leuP NC_000913.3 4606200 4606286 R tRNA-Leu complement(4606200..4606286) Escherichia coli str. K-12 substr. MG1655 948875 b4370 tRNA leuQ NC_000913.3 4606315 4606401 R tRNA-Leu complement(4606315..4606401) Escherichia coli str. K-12 substr. MG1655 948893 b0201 rRNA rrsH NC_000913.3 223771 225312 D 16S ribosomal RNA of rrnH operon 223771..225312 Escherichia coli str. K-12 substr. MG1655 944897 b0204 rRNA rrlH NC_000913.3 225759 228662 D 23S ribosomal RNA of rrnH operon 225759..228662 Escherichia coli str. K-12 substr. MG1655 944900 b0205 rRNA rrfH NC_000913.3 228756 228875 D 5S ribosomal RNA of rrnH operon 228756..228875 Escherichia coli str. K-12 substr. MG1655 944898 b2588 rRNA rrfG NC_000913.3 2726069 2726188 R 5S ribosomal RNA of rrnG operon complement(2726069..2726188) Escherichia coli str. K-12 substr. MG1655 947070 b2589 rRNA rrlG NC_000913.3 2726281 2729184 R 23S ribosomal RNA of rrnG operon complement(2726281..2729184) Escherichia coli str. K-12 substr. MG1655 947585 b2591 rRNA rrsG NC_000913.3 2729616 2731157 R 16S ribosomal RNA of rrnG operon complement(2729616..2731157) Escherichia coli str. K-12 substr. MG1655 947071 b3272 rRNA rrfF NC_000913.3 3423423 3423542 R 5S ribosomal RNA of rrnD operon complement(3423423..3423542) Escherichia coli str. K-12 substr. MG1655 947771 b3274 rRNA rrfD NC_000913.3 3423668 3423787 R 5S ribosomal RNA of rrnD operon complement(3423668..3423787) Escherichia coli str. K-12 substr. MG1655 947769 b3275 rRNA rrlD NC_000913.3 3423880 3426783 R 23S ribosomal RNA of rrnD operon complement(3423880..3426783) Escherichia coli str. K-12 substr. MG1655 947773 b3278 rRNA rrsD NC_000913.3 3427221 3428762 R 16S ribosomal RNA of rrnD operon complement(3427221..3428762) Escherichia coli str. K-12 substr. MG1655 947777 b3756 rRNA rrsC NC_000913.3 3941808 3943349 D 16S ribosomal RNA of rrnC operon 3941808..3943349 Escherichia coli str. K-12 substr. MG1655 948270 b3758 rRNA rrlC NC_000913.3 3943704 3946607 D 23S ribosomal RNA of rrnC operon 3943704..3946607 Escherichia coli str. K-12 substr. MG1655 948268 b3759 rRNA rrfC NC_000913.3 3946700 3946819 D 5S ribosomal RNA of rrnC operon 3946700..3946819 Escherichia coli str. K-12 substr. MG1655 948273 b3851 rRNA rrsA NC_000913.3 4035531 4037072 D 16S ribosomal RNA of rrnA operon 4035531..4037072 Escherichia coli str. K-12 substr. MG1655 948332 b3854 rRNA rrlA NC_000913.3 4037519 4040423 D 23S ribosomal RNA of rrnA operon 4037519..4040423 Escherichia coli str. K-12 substr. MG1655 948341 b3855 rRNA rrfA NC_000913.3 4040517 4040636 D 5S ribosomal RNA of rrnA operon 4040517..4040636 Escherichia coli str. K-12 substr. MG1655 948345 b3968 rRNA rrsB NC_000913.3 4166659 4168200 D 16S ribosomal RNA of rrnB operon 4166659..4168200 Escherichia coli str. K-12 substr. MG1655 948466 b3970 rRNA rrlB NC_000913.3 4168641 4171544 D 23S ribosomal RNA of rrnB operon 4168641..4171544 Escherichia coli str. K-12 substr. MG1655 948473 b3971 rRNA rrfB NC_000913.3 4171637 4171756 D 5S ribosomal RNA of rrnB operon 4171637..4171756 Escherichia coli str. K-12 substr. MG1655 948471 b4007 rRNA rrsE NC_000913.3 4208147 4209688 D 16S ribosomal RNA of rrnE operon 4208147..4209688 Escherichia coli str. K-12 substr. MG1655 948511 b4009 rRNA rrlE NC_000913.3 4210043 4212946 D 23S ribosomal RNA of rrnE operon 4210043..4212946 Escherichia coli str. K-12 substr. MG1655 948509 b4010 rRNA rrfE NC_000913.3 4213040 4213159 D 5S ribosomal RNA of rrnE operon 4213040..4213159 Escherichia coli str. K-12 substr. MG1655 948516